ALIDE2_RS22625 5e821e991982c0c55750a13ed866c2ce 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22625 5e821e991982c0c55750a13ed866c2ce 482 SUPERFAMILY SSF53720 10 481 1.09E-140 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22625 5e821e991982c0c55750a13ed866c2ce 482 Pfam PF00171 Aldehyde dehydrogenase family 27 477 3.5E-145 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22625 5e821e991982c0c55750a13ed866c2ce 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22625 5e821e991982c0c55750a13ed866c2ce 482 Gene3D G3DSA:3.40.605.10 16 269 1.1E-72 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22625 5e821e991982c0c55750a13ed866c2ce 482 PANTHER PTHR11699 18 477 1.4E-162 T 19-04-2016 ALIDE2_RS22625 5e821e991982c0c55750a13ed866c2ce 482 Gene3D G3DSA:3.40.309.10 270 453 1.2E-61 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS22625 5e821e991982c0c55750a13ed866c2ce 482 TIGRFAM TIGR03250 PhnAcAld_DH: putative phosphonoacetaldehyde dehydrogenase 11 482 1.5E-267 T 19-04-2016 IPR017656 Putative phosphonoacetaldehyde dehydrogenase ALIDE2_RS05210 d2a57237bf5b5f5044a976a17150aac2 400 PANTHER PTHR23527:SF1 4 399 6.6E-38 T 19-04-2016 ALIDE2_RS05210 d2a57237bf5b5f5044a976a17150aac2 400 Gene3D G3DSA:1.20.1250.20 208 387 9.7E-24 T 19-04-2016 ALIDE2_RS05210 d2a57237bf5b5f5044a976a17150aac2 400 PANTHER PTHR23527 4 399 6.6E-38 T 19-04-2016 ALIDE2_RS05210 d2a57237bf5b5f5044a976a17150aac2 400 SUPERFAMILY SSF103473 2 389 3.66E-56 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS05210 d2a57237bf5b5f5044a976a17150aac2 400 Pfam PF07690 Major Facilitator Superfamily 14 341 5.5E-35 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS05210 d2a57237bf5b5f5044a976a17150aac2 400 Gene3D G3DSA:1.20.1250.20 5 186 2.7E-17 T 19-04-2016 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 524 1.5E-154 T 19-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 SUPERFAMILY SSF57770 140 174 1.83E-12 T 19-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 Pfam PF09334 tRNA synthetases class I (M) 6 407 1.5E-136 T 19-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 Pfam PF01588 Putative tRNA binding domain 589 675 1.4E-21 T 19-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 Gene3D G3DSA:2.40.50.140 577 688 1.1E-40 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 571 688 1.1E-37 T 19-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 SUPERFAMILY SSF50249 578 688 4.16E-28 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 2.35E-21 T 19-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 2.35E-21 T 19-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 2.35E-21 T 19-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 262 273 2.35E-21 T 19-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 395 406 2.35E-21 T 19-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 300 315 2.35E-21 T 19-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 Hamap MF_00098 Methionine--tRNA ligase [metG]. 4 559 36.79 T 19-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 Gene3D G3DSA:1.10.730.10 391 548 2.8E-42 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 Gene3D G3DSA:3.40.50.620 181 390 5.4E-81 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 Gene3D G3DSA:3.40.50.620 4 142 5.4E-81 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 PANTHER PTHR11946 4 640 5.3E-193 T 19-04-2016 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 24 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 SUPERFAMILY SSF47323 397 597 1.76E-37 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 PANTHER PTHR11946:SF86 4 640 5.3E-193 T 19-04-2016 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 Gene3D G3DSA:2.20.28.20 143 174 6.6E-19 T 19-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 SUPERFAMILY SSF52374 174 397 7.74E-90 T 19-04-2016 ALIDE2_RS05145 3ea77099638b08f42689326e832a1ec0 689 SUPERFAMILY SSF52374 4 139 7.74E-90 T 19-04-2016 ALIDE2_RS20660 aadc0549fc55cdadb25f7db95ef0323a 300 Pfam PF06675 Protein of unknown function (DUF1177) 32 295 1.9E-114 T 19-04-2016 IPR009561 Protein of unknown function DUF1177 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 247 818 3.2E-172 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 SUPERFAMILY SSF81653 300 413 1.2E-23 T 19-04-2016 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 740 752 3.1E-24 T 19-04-2016 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 513 527 3.1E-24 T 19-04-2016 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 652 3.1E-24 T 19-04-2016 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 347 361 3.1E-24 T 19-04-2016 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 716 735 3.1E-24 T 19-04-2016 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 664 674 3.1E-24 T 19-04-2016 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 SUPERFAMILY SSF81665 414 507 1.12E-18 T 19-04-2016 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 SUPERFAMILY SSF81665 250 301 1.12E-18 T 19-04-2016 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 SUPERFAMILY SSF81665 584 590 1.12E-18 T 19-04-2016 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 Gene3D G3DSA:2.70.150.10 250 414 5.3E-29 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 515 521 - T 19-04-2016 IPR018303 P-type ATPase, phosphorylation site ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 Gene3D G3DSA:3.30.70.100 87 144 6.1E-4 T 19-04-2016 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 PANTHER PTHR24093:SF317 212 820 4.0E-196 T 19-04-2016 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 Pfam PF00702 haloacid dehalogenase-like hydrolase 510 729 1.7E-36 T 19-04-2016 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 Pfam PF00122 E1-E2 ATPase 268 504 1.2E-62 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 SUPERFAMILY SSF56784 572 816 1.03E-47 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 SUPERFAMILY SSF56784 513 531 1.03E-47 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 618 794 9.5E-34 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 270 545 1.1E-37 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 Gene3D G3DSA:3.40.50.1000 647 782 6.0E-42 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 Gene3D G3DSA:3.40.50.1000 486 527 6.0E-42 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 Gene3D G3DSA:3.40.1110.10 528 646 3.2E-16 T 19-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 ALIDE2_RS16855 7844b96180183072c3805acc5aeaed70 835 PANTHER PTHR24093 212 820 4.0E-196 T 19-04-2016 ALIDE2_RS22925 69051ba47af1ed80d58fdb22e4beaa6e 655 SMART SM00283 390 637 1.2E-78 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS22925 69051ba47af1ed80d58fdb22e4beaa6e 655 SUPERFAMILY SSF58104 358 638 9.16E-67 T 19-04-2016 ALIDE2_RS22925 69051ba47af1ed80d58fdb22e4beaa6e 655 Pfam PF08376 Nitrate and nitrite sensing 63 298 6.8E-15 T 19-04-2016 IPR013587 Nitrate/nitrite sensing protein ALIDE2_RS22925 69051ba47af1ed80d58fdb22e4beaa6e 655 Gene3D G3DSA:1.10.287.950 404 609 7.6E-56 T 19-04-2016 ALIDE2_RS22925 69051ba47af1ed80d58fdb22e4beaa6e 655 PANTHER PTHR32089 268 292 2.1E-123 T 19-04-2016 ALIDE2_RS22925 69051ba47af1ed80d58fdb22e4beaa6e 655 PANTHER PTHR32089 311 640 2.1E-123 T 19-04-2016 ALIDE2_RS22925 69051ba47af1ed80d58fdb22e4beaa6e 655 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 442 636 4.4E-53 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS22925 69051ba47af1ed80d58fdb22e4beaa6e 655 Pfam PF00672 HAMP domain 318 385 8.4E-13 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS22925 69051ba47af1ed80d58fdb22e4beaa6e 655 SMART SM00304 337 389 2.0E-6 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS22925 69051ba47af1ed80d58fdb22e4beaa6e 655 PANTHER PTHR32089:SF63 268 292 2.1E-123 T 19-04-2016 ALIDE2_RS22925 69051ba47af1ed80d58fdb22e4beaa6e 655 PANTHER PTHR32089:SF63 311 640 2.1E-123 T 19-04-2016 ALIDE2_RS16095 dd9b7e7062911a4a604f3c166a584d3d 389 PANTHER PTHR18919:SF14 1 389 4.0E-203 T 19-04-2016 ALIDE2_RS16095 dd9b7e7062911a4a604f3c166a584d3d 389 Gene3D G3DSA:3.40.47.10 273 388 4.7E-59 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS16095 dd9b7e7062911a4a604f3c166a584d3d 389 Gene3D G3DSA:3.40.47.10 136 182 4.7E-59 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS16095 dd9b7e7062911a4a604f3c166a584d3d 389 Gene3D G3DSA:3.40.47.10 183 272 1.1E-60 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS16095 dd9b7e7062911a4a604f3c166a584d3d 389 Gene3D G3DSA:3.40.47.10 4 125 1.1E-60 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS16095 dd9b7e7062911a4a604f3c166a584d3d 389 Pfam PF00108 Thiolase, N-terminal domain 5 259 1.9E-61 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS16095 dd9b7e7062911a4a604f3c166a584d3d 389 SUPERFAMILY SSF53901 1 261 1.03E-69 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS16095 dd9b7e7062911a4a604f3c166a584d3d 389 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 387 6.8E-126 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS16095 dd9b7e7062911a4a604f3c166a584d3d 389 PIRSF PIRSF000429 1 389 2.5E-116 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS16095 dd9b7e7062911a4a604f3c166a584d3d 389 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 19-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 ALIDE2_RS16095 dd9b7e7062911a4a604f3c166a584d3d 389 ProSitePatterns PS00737 Thiolases signature 2. 335 351 - T 19-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 ALIDE2_RS16095 dd9b7e7062911a4a604f3c166a584d3d 389 SUPERFAMILY SSF53901 267 388 1.41E-41 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS16095 dd9b7e7062911a4a604f3c166a584d3d 389 Pfam PF02803 Thiolase, C-terminal domain 266 387 6.4E-43 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS16095 dd9b7e7062911a4a604f3c166a584d3d 389 PANTHER PTHR18919 1 389 4.0E-203 T 19-04-2016 ALIDE2_RS02880 ee38801387f63208f32f1268d5ec8102 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 83 176 2.1E-15 T 19-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ALIDE2_RS02880 ee38801387f63208f32f1268d5ec8102 227 SMART SM00702 1 177 1.6E-22 T 19-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 ALIDE2_RS02880 ee38801387f63208f32f1268d5ec8102 227 SUPERFAMILY SSF51197 5 175 4.12E-8 T 19-04-2016 ALIDE2_RS02880 ee38801387f63208f32f1268d5ec8102 227 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 227 44.571 T 19-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 ALIDE2_RS02880 ee38801387f63208f32f1268d5ec8102 227 PANTHER PTHR41536:SF1 2 227 3.3E-103 T 19-04-2016 ALIDE2_RS02880 ee38801387f63208f32f1268d5ec8102 227 PANTHER PTHR41536 2 227 3.3E-103 T 19-04-2016 ALIDE2_RS00880 fa19f7e95fd08cfcba8d864142b41dc0 286 PANTHER PTHR24317 1 252 1.1E-131 T 19-04-2016 ALIDE2_RS00880 fa19f7e95fd08cfcba8d864142b41dc0 286 SUPERFAMILY SSF51735 14 254 7.52E-69 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00880 fa19f7e95fd08cfcba8d864142b41dc0 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.8E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00880 fa19f7e95fd08cfcba8d864142b41dc0 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 4.8E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00880 fa19f7e95fd08cfcba8d864142b41dc0 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 4.8E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00880 fa19f7e95fd08cfcba8d864142b41dc0 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 4.8E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00880 fa19f7e95fd08cfcba8d864142b41dc0 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 4.8E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00880 fa19f7e95fd08cfcba8d864142b41dc0 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 4.8E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00880 fa19f7e95fd08cfcba8d864142b41dc0 286 PANTHER PTHR24317:SF5 1 252 1.1E-131 T 19-04-2016 ALIDE2_RS00880 fa19f7e95fd08cfcba8d864142b41dc0 286 Gene3D G3DSA:3.40.50.720 3 254 3.5E-75 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00880 fa19f7e95fd08cfcba8d864142b41dc0 286 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 254 3.2E-53 T 19-04-2016 ALIDE2_RS17425 5361b6d1ace079496a69c793ade5ec73 522 SUPERFAMILY SSF81301 155 207 2.4E-35 T 19-04-2016 ALIDE2_RS17425 5361b6d1ace079496a69c793ade5ec73 522 SUPERFAMILY SSF81301 35 128 2.4E-35 T 19-04-2016 ALIDE2_RS17425 5361b6d1ace079496a69c793ade5ec73 522 PANTHER PTHR13734:SF47 29 289 6.7E-96 T 19-04-2016 ALIDE2_RS17425 5361b6d1ace079496a69c793ade5ec73 522 PANTHER PTHR13734 29 289 6.7E-96 T 19-04-2016 ALIDE2_RS17425 5361b6d1ace079496a69c793ade5ec73 522 Pfam PF01743 Poly A polymerase head domain 61 210 2.7E-32 T 19-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 ALIDE2_RS17425 5361b6d1ace079496a69c793ade5ec73 522 Gene3D G3DSA:1.10.3090.10 210 443 3.0E-40 T 19-04-2016 ALIDE2_RS17425 5361b6d1ace079496a69c793ade5ec73 522 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 32 476 5.2E-137 T 19-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 ALIDE2_RS17425 5361b6d1ace079496a69c793ade5ec73 522 Pfam PF12626 Polymerase A arginine-rich C-terminus 354 466 2.9E-36 T 19-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain ALIDE2_RS17425 5361b6d1ace079496a69c793ade5ec73 522 SUPERFAMILY SSF81891 208 442 2.88E-41 T 19-04-2016 ALIDE2_RS17425 5361b6d1ace079496a69c793ade5ec73 522 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 29 507 33.432 T 19-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 ALIDE2_RS17425 5361b6d1ace079496a69c793ade5ec73 522 Gene3D G3DSA:3.30.460.10 44 209 7.3E-46 T 19-04-2016 ALIDE2_RS17425 5361b6d1ace079496a69c793ade5ec73 522 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 240 300 3.6E-14 T 19-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain ALIDE2_RS17710 40815a1df27aec5da411f4550506deb7 593 SUPERFAMILY SSF55073 529 592 1.88E-7 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS17710 40815a1df27aec5da411f4550506deb7 593 SUPERFAMILY SSF55785 398 511 1.01E-14 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS17710 40815a1df27aec5da411f4550506deb7 593 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 399 517 1.7E-8 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS17710 40815a1df27aec5da411f4550506deb7 593 Gene3D G3DSA:3.30.450.20 105 201 5.0E-7 T 19-04-2016 ALIDE2_RS17710 40815a1df27aec5da411f4550506deb7 593 SMART SM00091 400 465 8.4E-5 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS17710 40815a1df27aec5da411f4550506deb7 593 Gene3D G3DSA:3.30.450.20 399 511 7.1E-15 T 19-04-2016 ALIDE2_RS17710 40815a1df27aec5da411f4550506deb7 593 Gene3D G3DSA:3.30.70.270 525 591 1.6E-12 T 19-04-2016 ALIDE2_RS17710 40815a1df27aec5da411f4550506deb7 593 Pfam PF00990 Diguanylate cyclase, GGDEF domain 525 592 2.3E-9 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS17710 40815a1df27aec5da411f4550506deb7 593 Pfam PF08447 PAS fold 424 495 3.8E-8 T 19-04-2016 IPR013655 PAS fold-3 GO:0005515 ALIDE2_RS19385 51ac9bebbbabb7f64db320564546a708 299 PANTHER PTHR35457 204 299 3.0E-16 T 19-04-2016 ALIDE2_RS19385 51ac9bebbbabb7f64db320564546a708 299 PANTHER PTHR35457 1 188 3.0E-16 T 19-04-2016 ALIDE2_RS19385 51ac9bebbbabb7f64db320564546a708 299 PANTHER PTHR35457:SF1 204 299 3.0E-16 T 19-04-2016 ALIDE2_RS19385 51ac9bebbbabb7f64db320564546a708 299 PANTHER PTHR35457:SF1 1 188 3.0E-16 T 19-04-2016 ALIDE2_RS19385 51ac9bebbbabb7f64db320564546a708 299 Pfam PF02628 Cytochrome oxidase assembly protein 57 287 4.8E-23 T 19-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 ALIDE2_RS00675 a0f06cf68b26df71519729c185c8efa3 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 250 7.4E-56 T 19-04-2016 ALIDE2_RS00675 a0f06cf68b26df71519729c185c8efa3 268 SUPERFAMILY SSF51735 9 252 8.98E-76 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00675 a0f06cf68b26df71519729c185c8efa3 268 PANTHER PTHR24322 157 189 1.9E-61 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00675 a0f06cf68b26df71519729c185c8efa3 268 PANTHER PTHR24322 14 141 1.9E-61 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00675 a0f06cf68b26df71519729c185c8efa3 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.7E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00675 a0f06cf68b26df71519729c185c8efa3 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.7E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00675 a0f06cf68b26df71519729c185c8efa3 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.7E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00675 a0f06cf68b26df71519729c185c8efa3 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.7E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00675 a0f06cf68b26df71519729c185c8efa3 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.7E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00675 a0f06cf68b26df71519729c185c8efa3 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.7E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00675 a0f06cf68b26df71519729c185c8efa3 268 Gene3D G3DSA:3.40.50.720 3 252 6.3E-76 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00675 a0f06cf68b26df71519729c185c8efa3 268 PANTHER PTHR24322:SF427 157 189 1.9E-61 T 19-04-2016 ALIDE2_RS00675 a0f06cf68b26df71519729c185c8efa3 268 PANTHER PTHR24322:SF427 14 141 1.9E-61 T 19-04-2016 ALIDE2_RS02195 ac42e2a5587d05459eaf707e7dda40cf 336 SUPERFAMILY SSF51735 1 334 1.14E-86 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS02195 ac42e2a5587d05459eaf707e7dda40cf 336 PRINTS PR01713 Nucleotide sugar epimerase signature 296 313 3.7E-26 T 19-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 ALIDE2_RS02195 ac42e2a5587d05459eaf707e7dda40cf 336 PRINTS PR01713 Nucleotide sugar epimerase signature 257 272 3.7E-26 T 19-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 ALIDE2_RS02195 ac42e2a5587d05459eaf707e7dda40cf 336 PRINTS PR01713 Nucleotide sugar epimerase signature 217 232 3.7E-26 T 19-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 ALIDE2_RS02195 ac42e2a5587d05459eaf707e7dda40cf 336 PRINTS PR01713 Nucleotide sugar epimerase signature 30 46 3.7E-26 T 19-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 ALIDE2_RS02195 ac42e2a5587d05459eaf707e7dda40cf 336 Gene3D G3DSA:3.90.25.10 200 219 1.7E-16 T 19-04-2016 ALIDE2_RS02195 ac42e2a5587d05459eaf707e7dda40cf 336 Gene3D G3DSA:3.90.25.10 261 331 1.7E-16 T 19-04-2016 ALIDE2_RS02195 ac42e2a5587d05459eaf707e7dda40cf 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 243 2.4E-57 T 19-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 ALIDE2_RS02195 ac42e2a5587d05459eaf707e7dda40cf 336 Gene3D G3DSA:3.40.50.720 4 199 1.2E-60 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS02195 ac42e2a5587d05459eaf707e7dda40cf 336 PANTHER PTHR10366 256 335 3.4E-164 T 19-04-2016 ALIDE2_RS02195 ac42e2a5587d05459eaf707e7dda40cf 336 PANTHER PTHR10366 3 237 3.4E-164 T 19-04-2016 ALIDE2_RS02195 ac42e2a5587d05459eaf707e7dda40cf 336 PANTHER PTHR10366:SF77 256 335 3.4E-164 T 19-04-2016 ALIDE2_RS02195 ac42e2a5587d05459eaf707e7dda40cf 336 PANTHER PTHR10366:SF77 3 237 3.4E-164 T 19-04-2016 ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 Gene3D G3DSA:3.40.50.300 223 369 9.9E-13 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 PANTHER PTHR18934:SF109 731 859 2.6E-295 T 19-04-2016 ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 PANTHER PTHR18934:SF109 556 694 2.6E-295 T 19-04-2016 ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 PANTHER PTHR18934:SF109 8 508 2.6E-295 T 19-04-2016 ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 Pfam PF11898 Domain of unknown function (DUF3418) 704 1321 1.7E-213 T 19-04-2016 IPR024590 RNA helicase HrpA, C-terminal ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 Pfam PF00271 Helicase conserved C-terminal domain 232 351 3.7E-10 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 3 525 1.8E-251 T 19-04-2016 IPR010222 RNA helicase HrpA GO:0004004 ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 SMART SM00490 251 352 7.9E-16 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 SMART SM00487 8 204 3.9E-24 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 SMART SM00382 25 318 6.3E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 SUPERFAMILY SSF52540 7 516 4.06E-102 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 600 691 5.0E-13 T 19-04-2016 IPR011709 Domain of unknown function DUF1605 ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 Pfam PF04408 Helicase associated domain (HA2) 415 484 1.5E-15 T 19-04-2016 IPR007502 Helicase-associated domain GO:0004386 ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 PANTHER PTHR18934 731 859 2.6E-295 T 19-04-2016 ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 PANTHER PTHR18934 556 694 2.6E-295 T 19-04-2016 ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 PANTHER PTHR18934 8 508 2.6E-295 T 19-04-2016 ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 Gene3D G3DSA:3.40.50.300 10 175 2.3E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 Pfam PF00270 DEAD/DEAH box helicase 25 174 3.3E-7 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ALIDE2_RS14665 a56e93a362730f36ee38e9221bf9d4c6 1326 SMART SM00847 412 502 4.9E-29 T 19-04-2016 IPR007502 Helicase-associated domain GO:0004386 ALIDE2_RS07450 8df956aa3652c082a52a871ec1eaf732 385 Gene3D G3DSA:3.40.50.10540 311 378 2.8E-89 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07450 8df956aa3652c082a52a871ec1eaf732 385 Gene3D G3DSA:3.40.50.10540 7 222 2.8E-89 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07450 8df956aa3652c082a52a871ec1eaf732 385 PANTHER PTHR24023:SF593 68 379 3.5E-18 T 19-04-2016 ALIDE2_RS07450 8df956aa3652c082a52a871ec1eaf732 385 PANTHER PTHR24023 68 379 3.5E-18 T 19-04-2016 ALIDE2_RS07450 8df956aa3652c082a52a871ec1eaf732 385 Gene3D G3DSA:3.30.1540.10 229 310 3.2E-29 T 19-04-2016 ALIDE2_RS07450 8df956aa3652c082a52a871ec1eaf732 385 Pfam PF02515 CoA-transferase family III 11 375 1.1E-105 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS07450 8df956aa3652c082a52a871ec1eaf732 385 SUPERFAMILY SSF89796 9 382 5.23E-111 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS12935 2bbb7751a1afcc32a100f7b93dfddb0c 94 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 7 76 8.7E-30 T 19-04-2016 IPR018720 Domain of unknown function DUF2249 ALIDE2_RS22725 dcef0bc71c79162df8368084da8747ba 271 SUPERFAMILY SSF56317 1 269 1.05E-78 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ALIDE2_RS22725 dcef0bc71c79162df8368084da8747ba 271 Gene3D G3DSA:3.60.110.10 1 269 3.0E-83 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ALIDE2_RS22725 dcef0bc71c79162df8368084da8747ba 271 PANTHER PTHR23088:SF27 1 269 1.7E-90 T 19-04-2016 ALIDE2_RS22725 dcef0bc71c79162df8368084da8747ba 271 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 154 174 - T 19-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site ALIDE2_RS22725 dcef0bc71c79162df8368084da8747ba 271 Pfam PF00795 Carbon-nitrogen hydrolase 2 259 1.7E-51 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ALIDE2_RS22725 dcef0bc71c79162df8368084da8747ba 271 PANTHER PTHR23088 1 269 1.7E-90 T 19-04-2016 ALIDE2_RS16760 e259f3158090638c2e9a9813c6e64372 140 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS16760 e259f3158090638c2e9a9813c6e64372 140 Gene3D G3DSA:1.10.1660.10 63 135 4.7E-26 T 19-04-2016 ALIDE2_RS16760 e259f3158090638c2e9a9813c6e64372 140 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 6.1E-54 T 19-04-2016 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 ALIDE2_RS16760 e259f3158090638c2e9a9813c6e64372 140 Pfam PF09278 MerR, DNA binding 51 113 1.3E-17 T 19-04-2016 IPR015358 Transcription regulator MerR, DNA binding ALIDE2_RS16760 e259f3158090638c2e9a9813c6e64372 140 SUPERFAMILY SSF46955 8 129 1.65E-29 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS16760 e259f3158090638c2e9a9813c6e64372 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 3.7E-25 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS16760 e259f3158090638c2e9a9813c6e64372 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 3.7E-25 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS16760 e259f3158090638c2e9a9813c6e64372 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 3.7E-25 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS16760 e259f3158090638c2e9a9813c6e64372 140 PANTHER PTHR30204:SF18 1 117 2.7E-26 T 19-04-2016 ALIDE2_RS16760 e259f3158090638c2e9a9813c6e64372 140 SMART SM00422 8 77 3.2E-29 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS16760 e259f3158090638c2e9a9813c6e64372 140 Gene3D G3DSA:1.10.1660.10 8 62 2.4E-23 T 19-04-2016 ALIDE2_RS16760 e259f3158090638c2e9a9813c6e64372 140 PANTHER PTHR30204 1 117 2.7E-26 T 19-04-2016 ALIDE2_RS16760 e259f3158090638c2e9a9813c6e64372 140 Pfam PF00376 MerR family regulatory protein 9 46 9.7E-12 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS14795 2456534f6fa10d5a8d68ff1a17348079 337 Hamap MF_00323 Ferrochelatase [hemH]. 5 326 37.801 T 19-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 ALIDE2_RS14795 2456534f6fa10d5a8d68ff1a17348079 337 Pfam PF00762 Ferrochelatase 7 325 5.3E-113 T 19-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 ALIDE2_RS14795 2456534f6fa10d5a8d68ff1a17348079 337 SUPERFAMILY SSF53800 5 332 2.13E-105 T 19-04-2016 ALIDE2_RS14795 2456534f6fa10d5a8d68ff1a17348079 337 PANTHER PTHR11108 1 325 1.5E-120 T 19-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 ALIDE2_RS14795 2456534f6fa10d5a8d68ff1a17348079 337 TIGRFAM TIGR00109 hemH: ferrochelatase 4 325 2.9E-94 T 19-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 ALIDE2_RS14795 2456534f6fa10d5a8d68ff1a17348079 337 Gene3D G3DSA:3.40.50.1400 207 325 1.1E-36 T 19-04-2016 ALIDE2_RS14795 2456534f6fa10d5a8d68ff1a17348079 337 Gene3D G3DSA:3.40.50.1400 5 206 8.8E-67 T 19-04-2016 ALIDE2_RS14795 2456534f6fa10d5a8d68ff1a17348079 337 ProSitePatterns PS00534 Ferrochelatase signature. 195 214 - T 19-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 ALIDE2_RS15470 9c8a82eec849a7ce180dd054c3c71f31 270 PANTHER PTHR30136 14 266 2.0E-62 T 19-04-2016 ALIDE2_RS15470 9c8a82eec849a7ce180dd054c3c71f31 270 Gene3D G3DSA:3.30.450.40 84 258 3.1E-50 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS15470 9c8a82eec849a7ce180dd054c3c71f31 270 Pfam PF01614 Bacterial transcriptional regulator 132 251 3.0E-30 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS15470 9c8a82eec849a7ce180dd054c3c71f31 270 SUPERFAMILY SSF46785 14 85 4.04E-16 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15470 9c8a82eec849a7ce180dd054c3c71f31 270 Pfam PF09339 IclR helix-turn-helix domain 17 64 1.2E-12 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS15470 9c8a82eec849a7ce180dd054c3c71f31 270 SUPERFAMILY SSF55781 71 256 1.18E-43 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS15470 9c8a82eec849a7ce180dd054c3c71f31 270 SMART SM00346 14 103 5.6E-22 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS15470 9c8a82eec849a7ce180dd054c3c71f31 270 Gene3D G3DSA:1.10.10.10 13 83 6.6E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 PANTHER PTHR24093:SF332 1 796 3.5E-235 T 19-04-2016 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 SUPERFAMILY SSF55008 4 75 1.96E-10 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 PANTHER PTHR24093 1 796 3.5E-235 T 19-04-2016 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 Pfam PF00122 E1-E2 ATPase 262 482 3.6E-65 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 Gene3D G3DSA:3.40.50.1000 616 756 5.8E-56 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 Gene3D G3DSA:3.40.50.1000 462 505 5.8E-56 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 211 795 6.9E-180 T 19-04-2016 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 SUPERFAMILY SSF56784 489 509 1.07E-59 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 SUPERFAMILY SSF56784 546 792 1.07E-59 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 493 499 - T 19-04-2016 IPR018303 P-type ATPase, phosphorylation site ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 Pfam PF00702 haloacid dehalogenase-like hydrolase 488 702 1.1E-44 T 19-04-2016 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 Gene3D G3DSA:3.40.1110.10 506 615 6.7E-20 T 19-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 Pfam PF00403 Heavy-metal-associated domain 16 66 2.9E-8 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 263 780 4.7E-92 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 Gene3D G3DSA:2.70.150.10 254 391 8.0E-35 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 Gene3D G3DSA:3.30.70.100 1 68 3.6E-11 T 19-04-2016 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 SUPERFAMILY SSF81665 234 294 3.4E-13 T 19-04-2016 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 SUPERFAMILY SSF81665 737 757 3.4E-13 T 19-04-2016 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 SUPERFAMILY SSF81665 391 485 3.4E-13 T 19-04-2016 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 229 794 5.8E-181 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 SUPERFAMILY SSF81653 293 390 9.94E-30 T 19-04-2016 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 340 354 1.7E-29 T 19-04-2016 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 613 624 1.7E-29 T 19-04-2016 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 635 645 1.7E-29 T 19-04-2016 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 711 723 1.7E-29 T 19-04-2016 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 491 505 1.7E-29 T 19-04-2016 ALIDE2_RS13590 76830758531f56a3be46bf371d03cb4c 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 688 707 1.7E-29 T 19-04-2016 ALIDE2_RS12815 21971a1309d1f570f968bc234a230f68 304 Gene3D G3DSA:3.40.190.10 181 264 1.2E-15 T 19-04-2016 ALIDE2_RS12815 21971a1309d1f570f968bc234a230f68 304 Pfam PF03466 LysR substrate binding domain 91 299 2.9E-47 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS12815 21971a1309d1f570f968bc234a230f68 304 Gene3D G3DSA:3.40.190.10 94 180 5.3E-19 T 19-04-2016 ALIDE2_RS12815 21971a1309d1f570f968bc234a230f68 304 Gene3D G3DSA:1.10.10.10 4 87 3.0E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12815 21971a1309d1f570f968bc234a230f68 304 PANTHER PTHR30126 3 296 3.3E-119 T 19-04-2016 ALIDE2_RS12815 21971a1309d1f570f968bc234a230f68 304 SUPERFAMILY SSF46785 4 114 1.01E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12815 21971a1309d1f570f968bc234a230f68 304 PANTHER PTHR30126:SF36 3 296 3.3E-119 T 19-04-2016 ALIDE2_RS12815 21971a1309d1f570f968bc234a230f68 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.5E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12815 21971a1309d1f570f968bc234a230f68 304 SUPERFAMILY SSF53850 92 302 3.98E-46 T 19-04-2016 ALIDE2_RS12815 21971a1309d1f570f968bc234a230f68 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.5E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12815 21971a1309d1f570f968bc234a230f68 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.5E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12815 21971a1309d1f570f968bc234a230f68 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.5E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 SUPERFAMILY SSF46565 1 112 3.66E-37 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 SMART SM00271 4 64 2.3E-31 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 Gene3D G3DSA:2.60.260.20 113 143 2.5E-21 T 19-04-2016 ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 Gene3D G3DSA:2.60.260.20 214 257 2.5E-21 T 19-04-2016 ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 PANTHER PTHR24078:SF190 1 350 1.6E-155 T 19-04-2016 ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 49 68 - T 19-04-2016 IPR018253 DnaJ domain, conserved site ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 352 2.1E-137 T 19-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 Gene3D G3DSA:2.60.260.20 259 336 2.8E-23 T 19-04-2016 ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 SUPERFAMILY SSF49493 262 347 6.02E-23 T 19-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 SUPERFAMILY SSF49493 117 158 5.89E-19 T 19-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 SUPERFAMILY SSF49493 217 260 5.89E-19 T 19-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 Pfam PF00226 DnaJ domain 5 69 1.8E-27 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 Pfam PF01556 DnaJ C terminal domain 124 336 1.5E-42 T 19-04-2016 IPR002939 Chaperone DnaJ, C-terminal ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 PANTHER PTHR24078 1 350 1.6E-155 T 19-04-2016 ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 Gene3D G3DSA:2.10.230.10 144 213 2.5E-24 T 19-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 PRINTS PR00625 DnaJ domain signature 7 25 3.4E-33 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 PRINTS PR00625 DnaJ domain signature 64 83 3.4E-33 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 PRINTS PR00625 DnaJ domain signature 44 64 3.4E-33 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 PRINTS PR00625 DnaJ domain signature 25 40 3.4E-33 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 SUPERFAMILY SSF57938 137 213 2.88E-22 T 19-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 Gene3D G3DSA:1.10.287.110 1 108 1.7E-37 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 41.5 T 19-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 ALIDE2_RS06585 1bb53b0e24c522ffdbad9015a25b9917 377 Pfam PF00684 DnaJ central domain 150 210 1.1E-14 T 19-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 PRINTS PR00834 HtrA/DegQ protease family signature 232 249 2.4E-54 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 PRINTS PR00834 HtrA/DegQ protease family signature 114 126 2.4E-54 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 PRINTS PR00834 HtrA/DegQ protease family signature 135 155 2.4E-54 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 PRINTS PR00834 HtrA/DegQ protease family signature 210 227 2.4E-54 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 PRINTS PR00834 HtrA/DegQ protease family signature 318 330 2.4E-54 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 PRINTS PR00834 HtrA/DegQ protease family signature 175 199 2.4E-54 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 Gene3D G3DSA:2.40.10.10 58 165 3.5E-38 T 19-04-2016 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 Pfam PF13365 Trypsin-like peptidase domain 105 239 9.6E-35 T 19-04-2016 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 58 374 8.2E-127 T 19-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 SMART SM00228 278 360 1.1E-12 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 PANTHER PTHR22939 58 373 2.9E-124 T 19-04-2016 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 Gene3D G3DSA:2.30.42.10 280 374 9.6E-28 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 Gene3D G3DSA:2.40.10.10 167 279 2.9E-45 T 19-04-2016 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 SUPERFAMILY SSF50156 237 360 8.41E-23 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 Pfam PF13180 PDZ domain 278 367 3.3E-14 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 PANTHER PTHR22939:SF93 58 373 2.9E-124 T 19-04-2016 ALIDE2_RS04255 77c79836f717262ff699c31c5a2ec1d4 379 SUPERFAMILY SSF50494 58 274 2.18E-67 T 19-04-2016 IPR009003 Peptidase S1, PA clan ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 SMART SM00532 18 494 2.2E-226 T 19-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 SUPERFAMILY SSF50249 364 442 1.88E-25 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 Pfam PF12826 Helix-hairpin-helix motif 556 619 1.3E-26 T 19-04-2016 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 SMART SM00292 639 716 2.1E-15 T 19-04-2016 IPR001357 BRCT domain ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 Pfam PF14520 Helix-hairpin-helix domain 494 548 2.1E-5 T 19-04-2016 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 PANTHER PTHR23389 211 579 1.9E-177 T 19-04-2016 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 PANTHER PTHR23389 19 185 1.9E-177 T 19-04-2016 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 640 713 3.9E-14 T 19-04-2016 IPR001357 BRCT domain ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 Gene3D G3DSA:3.40.50.10190 640 714 3.5E-26 T 19-04-2016 IPR001357 BRCT domain ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 368 442 1.4E-31 T 19-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 Gene3D G3DSA:1.10.287.610 18 82 7.3E-27 T 19-04-2016 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 Hamap MF_01588 DNA ligase [ligA]. 17 713 52.985 T 19-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 PANTHER PTHR23389:SF9 211 579 1.9E-177 T 19-04-2016 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 PANTHER PTHR23389:SF9 19 185 1.9E-177 T 19-04-2016 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 135 164 - T 19-04-2016 IPR018239 NAD-dependent DNA ligase, active site ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 Gene3D G3DSA:2.40.50.140 366 437 6.1E-32 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 PIRSF PIRSF001604 13 717 7.2E-229 T 19-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 SUPERFAMILY SSF47781 450 630 4.45E-61 T 19-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 26 708 8.0E-239 T 19-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 453 480 6.6E-9 T 19-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 21 182 1.3E-53 T 19-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 210 364 7.0E-56 T 19-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 377 392 - T 19-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 Gene3D G3DSA:3.30.470.30 139 298 3.3E-53 T 19-04-2016 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 Gene3D G3DSA:1.10.150.20 550 630 6.8E-35 T 19-04-2016 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 SMART SM00278 526 545 150.0 T 19-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 SMART SM00278 492 511 27.0 T 19-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 SMART SM00278 590 609 19.0 T 19-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 Gene3D G3DSA:1.10.150.20 481 549 3.3E-25 T 19-04-2016 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 SUPERFAMILY SSF56091 20 180 2.7E-107 T 19-04-2016 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 SUPERFAMILY SSF56091 209 362 2.7E-107 T 19-04-2016 ALIDE2_RS12190 5f77665e7d2a7125af1dc01c34ba4ab1 717 SUPERFAMILY SSF52113 640 713 1.31E-19 T 19-04-2016 IPR001357 BRCT domain ALIDE2_RS16860 2148831d8fdcc0cbf83c81779b727ba2 228 Gene3D G3DSA:3.40.50.2300 1 119 2.3E-37 T 19-04-2016 ALIDE2_RS16860 2148831d8fdcc0cbf83c81779b727ba2 228 SMART SM00862 148 223 5.5E-25 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS16860 2148831d8fdcc0cbf83c81779b727ba2 228 SMART SM00448 1 111 3.0E-40 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS16860 2148831d8fdcc0cbf83c81779b727ba2 228 PANTHER PTHR26402 1 226 3.0E-117 T 19-04-2016 ALIDE2_RS16860 2148831d8fdcc0cbf83c81779b727ba2 228 Pfam PF00072 Response regulator receiver domain 4 112 2.7E-27 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS16860 2148831d8fdcc0cbf83c81779b727ba2 228 Gene3D G3DSA:1.10.10.10 129 225 5.8E-31 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS16860 2148831d8fdcc0cbf83c81779b727ba2 228 SUPERFAMILY SSF46894 128 224 1.05E-28 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS16860 2148831d8fdcc0cbf83c81779b727ba2 228 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 223 1.0E-93 T 19-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 ALIDE2_RS16860 2148831d8fdcc0cbf83c81779b727ba2 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 9.8E-25 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS16860 2148831d8fdcc0cbf83c81779b727ba2 228 PANTHER PTHR26402:SF575 1 226 3.0E-117 T 19-04-2016 ALIDE2_RS16860 2148831d8fdcc0cbf83c81779b727ba2 228 SUPERFAMILY SSF52172 1 126 6.26E-39 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS16920 13fb6a49d26f7a955a2e30dec77a06f7 162 PANTHER PTHR36926:SF1 1 161 2.7E-28 T 19-04-2016 ALIDE2_RS16920 13fb6a49d26f7a955a2e30dec77a06f7 162 Pfam PF02674 Colicin V production protein 4 144 7.3E-36 T 19-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 ALIDE2_RS16920 13fb6a49d26f7a955a2e30dec77a06f7 162 PANTHER PTHR36926 1 161 2.7E-28 T 19-04-2016 ALIDE2_RS16920 13fb6a49d26f7a955a2e30dec77a06f7 162 Pfam PF10617 Protein of unknown function (DUF2474) 60 95 1.2E-5 T 19-04-2016 IPR018895 Protein of unknown function DUF2474 ALIDE2_RS09850 32c9ea3f60e59644483d9faed4cc235c 86 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 6.0E-32 T 19-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ALIDE2_RS09850 32c9ea3f60e59644483d9faed4cc235c 86 SUPERFAMILY SSF50249 1 71 6.57E-26 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS09850 32c9ea3f60e59644483d9faed4cc235c 86 PANTHER PTHR33370 1 83 7.1E-39 T 19-04-2016 ALIDE2_RS09850 32c9ea3f60e59644483d9faed4cc235c 86 Gene3D G3DSA:2.40.50.140 1 71 7.9E-36 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS09850 32c9ea3f60e59644483d9faed4cc235c 86 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 75 26.46 T 19-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ALIDE2_RS09850 32c9ea3f60e59644483d9faed4cc235c 86 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.4E-23 T 19-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 ALIDE2_RS09610 2ea721999dd3e2eb2a6421d4379dd49d 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 374 4.5E-53 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ALIDE2_RS09610 2ea721999dd3e2eb2a6421d4379dd49d 383 Gene3D G3DSA:2.40.50.100 65 97 1.0E-15 T 19-04-2016 ALIDE2_RS09610 2ea721999dd3e2eb2a6421d4379dd49d 383 Gene3D G3DSA:2.40.50.100 186 218 1.0E-15 T 19-04-2016 ALIDE2_RS09610 2ea721999dd3e2eb2a6421d4379dd49d 383 PANTHER PTHR30469 1 383 4.0E-49 T 19-04-2016 ALIDE2_RS09610 2ea721999dd3e2eb2a6421d4379dd49d 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 286 3.5E-18 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS09610 2ea721999dd3e2eb2a6421d4379dd49d 383 SUPERFAMILY SSF111369 56 288 1.31E-17 T 19-04-2016 ALIDE2_RS15565 7f97ff7bbe5c480fc33fa22caa9a1287 112 PIRSF PIRSF039144 1 112 6.8E-54 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS15565 7f97ff7bbe5c480fc33fa22caa9a1287 112 PANTHER PTHR30115:SF15 1 112 9.2E-64 T 19-04-2016 ALIDE2_RS15565 7f97ff7bbe5c480fc33fa22caa9a1287 112 SUPERFAMILY SSF54913 1 112 1.33E-44 T 19-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta ALIDE2_RS15565 7f97ff7bbe5c480fc33fa22caa9a1287 112 PANTHER PTHR30115 1 112 9.2E-64 T 19-04-2016 ALIDE2_RS15565 7f97ff7bbe5c480fc33fa22caa9a1287 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-43 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS15565 7f97ff7bbe5c480fc33fa22caa9a1287 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 19-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 ALIDE2_RS15565 7f97ff7bbe5c480fc33fa22caa9a1287 112 SMART SM00938 4 105 6.9E-66 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS15565 7f97ff7bbe5c480fc33fa22caa9a1287 112 PRINTS PR00340 P-II protein signature 52 75 3.1E-42 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS15565 7f97ff7bbe5c480fc33fa22caa9a1287 112 PRINTS PR00340 P-II protein signature 23 41 3.1E-42 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS15565 7f97ff7bbe5c480fc33fa22caa9a1287 112 PRINTS PR00340 P-II protein signature 83 103 3.1E-42 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS15565 7f97ff7bbe5c480fc33fa22caa9a1287 112 PRINTS PR00340 P-II protein signature 2 17 3.1E-42 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS15565 7f97ff7bbe5c480fc33fa22caa9a1287 112 Gene3D G3DSA:3.30.70.120 1 111 8.7E-49 T 19-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ALIDE2_RS15565 7f97ff7bbe5c480fc33fa22caa9a1287 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 19-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 ALIDE2_RS14425 3ca8fe5743517f35dfaa30018e3a7b01 344 Gene3D G3DSA:1.10.1530.10 15 82 8.3E-17 T 19-04-2016 ALIDE2_RS14425 3ca8fe5743517f35dfaa30018e3a7b01 344 PANTHER PTHR11091 12 344 1.6E-71 T 19-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS14425 3ca8fe5743517f35dfaa30018e3a7b01 344 SUPERFAMILY SSF89733 14 343 1.44E-94 T 19-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS14425 3ca8fe5743517f35dfaa30018e3a7b01 344 Gene3D G3DSA:3.30.1370.60 83 284 6.0E-72 T 19-04-2016 ALIDE2_RS14425 3ca8fe5743517f35dfaa30018e3a7b01 344 Pfam PF02615 Malate/L-lactate dehydrogenase 15 339 9.3E-95 T 19-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22315 8bd897fac4bf4b8f0c706e75b761eebf 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 19-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ALIDE2_RS22315 8bd897fac4bf4b8f0c706e75b761eebf 354 PANTHER PTHR30304 1 350 1.5E-115 T 19-04-2016 ALIDE2_RS22315 8bd897fac4bf4b8f0c706e75b761eebf 354 Gene3D G3DSA:3.20.20.70 1 333 9.9E-106 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS22315 8bd897fac4bf4b8f0c706e75b761eebf 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 328 5.1E-96 T 19-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ALIDE2_RS22315 8bd897fac4bf4b8f0c706e75b761eebf 354 PIRSF PIRSF001359 1 329 2.2E-82 T 19-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ALIDE2_RS22315 8bd897fac4bf4b8f0c706e75b761eebf 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 328 2.0E-92 T 19-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ALIDE2_RS22315 8bd897fac4bf4b8f0c706e75b761eebf 354 SUPERFAMILY SSF51569 3 328 1.41E-103 T 19-04-2016 ALIDE2_RS22315 8bd897fac4bf4b8f0c706e75b761eebf 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 7.7E-179 T 19-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 ALIDE2_RS22315 8bd897fac4bf4b8f0c706e75b761eebf 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 19-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ALIDE2_RS17655 ab5e5c5871578619193d3e4de5f9e818 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 214 1.1E-19 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17655 ab5e5c5871578619193d3e4de5f9e818 221 TIGRFAM TIGR03003 ectoine_ehuD: ectoine/hydroxyectoine ABC transporter, permease protein EhuD 7 214 1.2E-61 T 19-04-2016 IPR014341 Ectoine/hydroxyectoine ABC transporter, permease protein EhuD ALIDE2_RS17655 ab5e5c5871578619193d3e4de5f9e818 221 SUPERFAMILY SSF161098 13 200 5.89E-46 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17655 ab5e5c5871578619193d3e4de5f9e818 221 Gene3D G3DSA:1.10.3720.10 14 214 1.3E-48 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17655 ab5e5c5871578619193d3e4de5f9e818 221 PANTHER PTHR30614 1 220 4.4E-89 T 19-04-2016 ALIDE2_RS17655 ab5e5c5871578619193d3e4de5f9e818 221 PANTHER PTHR30614:SF14 1 220 4.4E-89 T 19-04-2016 ALIDE2_RS17655 ab5e5c5871578619193d3e4de5f9e818 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 1.3E-30 T 19-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 ALIDE2_RS19260 a35504d1fc29e8ac8a58e452dcda8d96 121 PANTHER PTHR26402 4 120 1.4E-42 T 19-04-2016 ALIDE2_RS19260 a35504d1fc29e8ac8a58e452dcda8d96 121 SUPERFAMILY SSF52172 4 120 3.42E-39 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS19260 a35504d1fc29e8ac8a58e452dcda8d96 121 Pfam PF00072 Response regulator receiver domain 6 117 1.3E-31 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS19260 a35504d1fc29e8ac8a58e452dcda8d96 121 Gene3D G3DSA:3.40.50.2300 4 120 1.6E-40 T 19-04-2016 ALIDE2_RS19260 a35504d1fc29e8ac8a58e452dcda8d96 121 SMART SM00448 4 117 8.1E-42 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS19905 4f6976262fb8b2d3159350f1a1195867 449 SUPERFAMILY SSF142984 266 349 3.01E-26 T 19-04-2016 ALIDE2_RS19905 4f6976262fb8b2d3159350f1a1195867 449 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 73 244 3.4E-45 T 19-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain ALIDE2_RS19905 4f6976262fb8b2d3159350f1a1195867 449 SMART SM00928 354 399 1.9E-24 T 19-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 ALIDE2_RS19905 4f6976262fb8b2d3159350f1a1195867 449 PANTHER PTHR11780 38 449 5.4E-212 T 19-04-2016 ALIDE2_RS19905 4f6976262fb8b2d3159350f1a1195867 449 Pfam PF10531 SLBB domain 268 316 2.3E-13 T 19-04-2016 IPR019554 Soluble ligand binding domain ALIDE2_RS19905 4f6976262fb8b2d3159350f1a1195867 449 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 359 438 1.3E-28 T 19-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 ALIDE2_RS19905 4f6976262fb8b2d3159350f1a1195867 449 PANTHER PTHR11780:SF10 38 449 5.4E-212 T 19-04-2016 ALIDE2_RS19905 4f6976262fb8b2d3159350f1a1195867 449 SUPERFAMILY SSF140490 351 441 1.26E-34 T 19-04-2016 ALIDE2_RS19905 4f6976262fb8b2d3159350f1a1195867 449 SUPERFAMILY SSF142019 35 265 1.05E-81 T 19-04-2016 ALIDE2_RS19905 4f6976262fb8b2d3159350f1a1195867 449 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 367 378 - T 19-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 ALIDE2_RS19905 4f6976262fb8b2d3159350f1a1195867 449 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 36 440 1.8E-192 T 19-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 ALIDE2_RS19900 5370ea65430c4602a209be8c7bd4a762 163 PIRSF PIRSF000216 1 163 1.6E-60 T 19-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 ALIDE2_RS19900 5370ea65430c4602a209be8c7bd4a762 163 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 113 131 - T 19-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 ALIDE2_RS19900 5370ea65430c4602a209be8c7bd4a762 163 PANTHER PTHR10371:SF3 3 160 1.3E-58 T 19-04-2016 ALIDE2_RS19900 5370ea65430c4602a209be8c7bd4a762 163 Gene3D G3DSA:3.40.30.10 76 154 7.7E-7 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS19900 5370ea65430c4602a209be8c7bd4a762 163 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 13 156 7.4E-51 T 19-04-2016 ALIDE2_RS19900 5370ea65430c4602a209be8c7bd4a762 163 PANTHER PTHR10371 3 160 1.3E-58 T 19-04-2016 ALIDE2_RS19900 5370ea65430c4602a209be8c7bd4a762 163 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 12 156 5.8E-58 T 19-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 ALIDE2_RS19900 5370ea65430c4602a209be8c7bd4a762 163 SUPERFAMILY SSF52833 3 158 9.95E-51 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS14870 b0d8f625f8ad9b148ff4d452a6021e42 200 PIRSF PIRSF036893 18 199 3.9E-46 T 19-04-2016 IPR022271 Lipocalin, ApoD type ALIDE2_RS14870 b0d8f625f8ad9b148ff4d452a6021e42 200 ProSitePatterns PS00213 Lipocalin signature. 54 65 - T 19-04-2016 IPR022272 Lipocalin family conserved site ALIDE2_RS14870 b0d8f625f8ad9b148ff4d452a6021e42 200 SUPERFAMILY SSF50814 32 193 4.99E-46 T 19-04-2016 IPR011038 Calycin-like ALIDE2_RS14870 b0d8f625f8ad9b148ff4d452a6021e42 200 Gene3D G3DSA:2.40.128.20 23 194 9.6E-55 T 19-04-2016 IPR012674 Calycin ALIDE2_RS14870 b0d8f625f8ad9b148ff4d452a6021e42 200 PRINTS PR01171 Bacterial lipocalin signature 140 148 3.2E-31 T 19-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 ALIDE2_RS14870 b0d8f625f8ad9b148ff4d452a6021e42 200 PRINTS PR01171 Bacterial lipocalin signature 53 67 3.2E-31 T 19-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 ALIDE2_RS14870 b0d8f625f8ad9b148ff4d452a6021e42 200 PRINTS PR01171 Bacterial lipocalin signature 123 137 3.2E-31 T 19-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 ALIDE2_RS14870 b0d8f625f8ad9b148ff4d452a6021e42 200 PRINTS PR01171 Bacterial lipocalin signature 70 86 3.2E-31 T 19-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 ALIDE2_RS14870 b0d8f625f8ad9b148ff4d452a6021e42 200 PRINTS PR01171 Bacterial lipocalin signature 182 192 3.2E-31 T 19-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 ALIDE2_RS14870 b0d8f625f8ad9b148ff4d452a6021e42 200 PRINTS PR01171 Bacterial lipocalin signature 89 98 3.2E-31 T 19-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 ALIDE2_RS14870 b0d8f625f8ad9b148ff4d452a6021e42 200 PRINTS PR01171 Bacterial lipocalin signature 155 166 3.2E-31 T 19-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 ALIDE2_RS14870 b0d8f625f8ad9b148ff4d452a6021e42 200 PANTHER PTHR10612 4 194 1.7E-41 T 19-04-2016 ALIDE2_RS14870 b0d8f625f8ad9b148ff4d452a6021e42 200 Pfam PF08212 Lipocalin-like domain 53 193 1.5E-42 T 19-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain ALIDE2_RS16665 baed396589f3f63f0164b0ccfe298797 233 Pfam PF00589 Phage integrase family 23 214 4.5E-5 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS16665 baed396589f3f63f0164b0ccfe298797 233 SUPERFAMILY SSF56349 21 207 3.83E-11 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS16665 baed396589f3f63f0164b0ccfe298797 233 Gene3D G3DSA:1.10.443.10 21 207 8.5E-13 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PRINTS PR00943 Copper-transporting ATPase signature 640 657 2.7E-17 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PRINTS PR00943 Copper-transporting ATPase signature 231 250 2.7E-17 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PRINTS PR00943 Copper-transporting ATPase signature 251 269 2.7E-17 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PRINTS PR00943 Copper-transporting ATPase signature 385 399 2.7E-17 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PRINTS PR00943 Copper-transporting ATPase signature 174 193 2.7E-17 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PRINTS PR00943 Copper-transporting ATPase signature 447 462 2.7E-17 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 SMART SM00746 25 62 1.2E-7 T 19-04-2016 IPR011017 TRASH domain ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 Pfam PF00702 haloacid dehalogenase-like hydrolase 460 677 2.4E-36 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PANTHER PTHR24093 118 774 7.2E-217 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PANTHER PTHR24093 23 97 7.2E-217 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 SUPERFAMILY SSF81653 265 362 1.03E-25 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 Gene3D G3DSA:2.70.150.10 212 362 3.7E-30 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 233 741 4.0E-86 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 Pfam PF04945 YHS domain 24 66 1.5E-15 T 19-04-2016 IPR007029 YHS domain ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PANTHER PTHR24093:SF332 118 774 7.2E-217 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PANTHER PTHR24093:SF332 23 97 7.2E-217 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 588 599 3.8E-28 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 663 682 3.8E-28 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 686 698 3.8E-28 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 610 620 3.8E-28 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 3.8E-28 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 464 478 3.8E-28 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 SUPERFAMILY SSF56784 521 770 1.15E-52 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 SUPERFAMILY SSF56784 462 482 1.15E-52 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 189 772 4.6E-180 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 171 773 9.4E-174 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 Pfam PF00122 E1-E2 ATPase 232 455 1.4E-65 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 SUPERFAMILY SSF81665 228 265 7.32E-11 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 SUPERFAMILY SSF81665 363 457 7.32E-11 T 19-04-2016 ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 SUPERFAMILY SSF47240 25 66 3.78E-5 T 19-04-2016 IPR009078 Ferritin-like superfamily ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 Gene3D G3DSA:3.40.50.1000 435 480 4.3E-50 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 Gene3D G3DSA:3.40.50.1000 591 730 4.3E-50 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 466 472 - T 19-04-2016 IPR018303 P-type ATPase, phosphorylation site ALIDE2_RS13650 b85ad5e0ad33b716fa95a4c6bd264223 777 Gene3D G3DSA:3.40.1110.10 481 590 1.9E-19 T 19-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 173 753 3.4E-132 T 19-04-2016 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 PANTHER PTHR24093 41 753 9.6E-157 T 19-04-2016 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 SUPERFAMILY SSF56784 515 750 2.21E-44 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 SUPERFAMILY SSF56784 452 472 2.21E-44 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 674 686 3.3E-19 T 19-04-2016 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 454 468 3.3E-19 T 19-04-2016 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 306 320 3.3E-19 T 19-04-2016 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 598 608 3.3E-19 T 19-04-2016 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 651 670 3.3E-19 T 19-04-2016 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 SUPERFAMILY SSF55008 32 102 6.94E-19 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 456 462 - T 19-04-2016 IPR018303 P-type ATPase, phosphorylation site ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 PANTHER PTHR24093:SF50 41 753 9.6E-157 T 19-04-2016 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 Gene3D G3DSA:2.70.150.10 216 356 5.8E-26 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 Pfam PF00122 E1-E2 ATPase 227 445 2.9E-56 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 SUPERFAMILY SSF81665 357 448 9.42E-14 T 19-04-2016 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 SUPERFAMILY SSF81665 197 259 9.42E-14 T 19-04-2016 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 Pfam PF00702 haloacid dehalogenase-like hydrolase 450 664 1.0E-34 T 19-04-2016 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 Gene3D G3DSA:3.30.70.100 39 117 8.2E-21 T 19-04-2016 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 Gene3D G3DSA:3.40.50.1000 577 719 1.6E-53 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 Gene3D G3DSA:3.40.50.1000 428 470 1.6E-53 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 SUPERFAMILY SSF103473 111 210 9.29E-5 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 SUPERFAMILY SSF81653 264 356 6.8E-23 T 19-04-2016 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 190 753 3.2E-148 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 229 735 2.5E-70 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS05580 e986abee4fced3d8512b0cfd41182581 778 Pfam PF00403 Heavy-metal-associated domain 41 98 8.6E-11 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS03525 438725d114c8144d428ad75bc770a010 473 PANTHER PTHR30250 3 472 1.1E-25 T 19-04-2016 ALIDE2_RS03525 438725d114c8144d428ad75bc770a010 473 Pfam PF13440 Polysaccharide biosynthesis protein 19 311 2.5E-53 T 19-04-2016 ALIDE2_RS03525 438725d114c8144d428ad75bc770a010 473 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 313 453 5.7E-10 T 19-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 SUPERFAMILY SSF46689 361 451 3.55E-11 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 452 3.6E-7 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 415 432 3.6E-7 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 174 187 - T 19-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 19-04-2016 IPR025944 Sigma-54 interaction domain, conserved site ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 Gene3D G3DSA:1.10.8.60 322 392 3.1E-20 T 19-04-2016 ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 Pfam PF02954 Bacterial regulatory protein, Fis family 409 443 2.3E-9 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 SUPERFAMILY SSF52540 150 389 9.91E-69 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 Pfam PF00072 Response regulator receiver domain 11 119 3.3E-17 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 Gene3D G3DSA:3.40.50.300 149 321 9.5E-55 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 TIGRFAM TIGR02915 PEP_resp_reg: PEP-CTERM-box response regulator transcription factor 10 452 1.7E-217 T 19-04-2016 IPR014264 Signal transduction response regulator, PEP-CTERM system, putative ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 Gene3D G3DSA:3.40.50.2300 10 137 1.6E-25 T 19-04-2016 ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 Gene3D G3DSA:1.10.10.60 398 452 5.9E-11 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 SUPERFAMILY SSF52172 10 194 6.97E-32 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 PANTHER PTHR32071 10 451 1.2E-167 T 19-04-2016 ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 SMART SM00382 170 312 2.1E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 SMART SM00448 8 122 3.4E-15 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 Pfam PF00158 Sigma-54 interaction domain 151 315 2.4E-68 T 19-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ALIDE2_RS03590 9d6846698b7809506c2d958fcf1c360c 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 235 250 - T 19-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ALIDE2_RS13645 4f1756bcdf0737719206f6ff525649f0 612 SUPERFAMILY SSF53474 103 444 7.72E-26 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS13645 4f1756bcdf0737719206f6ff525649f0 612 Gene3D G3DSA:3.40.50.1820 190 425 7.8E-7 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS13645 4f1756bcdf0737719206f6ff525649f0 612 Pfam PF11339 Protein of unknown function (DUF3141) 76 611 6.1E-209 T 19-04-2016 IPR024501 Protein of unknown function DUF3141 ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 PIRSF PIRSF000414 1 532 1.3E-208 T 19-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 Gene3D G3DSA:3.40.140.20 251 364 4.9E-50 T 19-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 532 42.588 T 19-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 PANTHER PTHR11692:SF2 1 191 3.8E-289 T 19-04-2016 ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 PANTHER PTHR11692:SF2 208 532 3.8E-289 T 19-04-2016 ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 532 2.8E-215 T 19-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 SUPERFAMILY SSF52335 2 190 1.26E-67 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 PANTHER PTHR11692 1 191 3.8E-289 T 19-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 PANTHER PTHR11692 208 532 3.8E-289 T 19-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 Pfam PF01808 AICARFT/IMPCHase bienzyme 132 462 1.8E-113 T 19-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 Gene3D G3DSA:3.40.50.1380 2 184 1.1E-80 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 SMART SM00798 132 464 9.3E-191 T 19-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 SMART SM00851 12 127 1.6E-60 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 SUPERFAMILY SSF53927 218 532 1.81E-124 T 19-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 Gene3D G3DSA:3.40.140.20 380 522 9.2E-54 T 19-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 ALIDE2_RS19240 4d2bbdf6e31ee57a4621731ef854a2a6 532 Pfam PF02142 MGS-like domain 12 126 5.0E-30 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain ALIDE2_RS01880 83ef39d812bc1cfe35f51ab5b1368607 156 SUPERFAMILY SSF81573 62 121 1.44E-8 T 19-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain ALIDE2_RS01880 83ef39d812bc1cfe35f51ab5b1368607 156 Gene3D G3DSA:1.20.5.620 62 122 9.0E-11 T 19-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain ALIDE2_RS01880 83ef39d812bc1cfe35f51ab5b1368607 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 9.0E-27 T 19-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ALIDE2_RS01880 83ef39d812bc1cfe35f51ab5b1368607 156 PANTHER PTHR33445 1 156 6.8E-37 T 19-04-2016 ALIDE2_RS01880 83ef39d812bc1cfe35f51ab5b1368607 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 5.7E-38 T 19-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 ALIDE2_RS01880 83ef39d812bc1cfe35f51ab5b1368607 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 11.862 T 19-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ALIDE2_RS23200 5e16d3edec0eb77687049393ecd509c9 411 SUPERFAMILY SSF89796 17 411 3.4E-117 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS23200 5e16d3edec0eb77687049393ecd509c9 411 PANTHER PTHR24023 83 398 1.4E-23 T 19-04-2016 ALIDE2_RS23200 5e16d3edec0eb77687049393ecd509c9 411 Gene3D G3DSA:3.30.1540.10 238 320 1.5E-25 T 19-04-2016 ALIDE2_RS23200 5e16d3edec0eb77687049393ecd509c9 411 Gene3D G3DSA:3.40.50.10540 321 411 1.1E-94 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS23200 5e16d3edec0eb77687049393ecd509c9 411 Gene3D G3DSA:3.40.50.10540 16 231 1.1E-94 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS23200 5e16d3edec0eb77687049393ecd509c9 411 PANTHER PTHR24023:SF593 83 398 1.4E-23 T 19-04-2016 ALIDE2_RS23200 5e16d3edec0eb77687049393ecd509c9 411 Pfam PF02515 CoA-transferase family III 19 388 1.1E-108 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS22970 2bd3add2f1a239d87f592ee5dd473c1a 361 SUPERFAMILY SSF56935 29 361 1.86E-61 T 19-04-2016 ALIDE2_RS22970 2bd3add2f1a239d87f592ee5dd473c1a 361 Pfam PF13609 Gram-negative porin 15 336 1.6E-42 T 19-04-2016 ALIDE2_RS22970 2bd3add2f1a239d87f592ee5dd473c1a 361 Gene3D G3DSA:2.40.160.10 29 361 1.9E-69 T 19-04-2016 IPR023614 Porin domain ALIDE2_RS07155 2a2232e8dd0a1f8a0098020dae9b9611 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 19-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ALIDE2_RS07155 2a2232e8dd0a1f8a0098020dae9b9611 471 PANTHER PTHR20852 4 140 1.9E-251 T 19-04-2016 ALIDE2_RS07155 2a2232e8dd0a1f8a0098020dae9b9611 471 PANTHER PTHR20852 162 471 1.9E-251 T 19-04-2016 ALIDE2_RS07155 2a2232e8dd0a1f8a0098020dae9b9611 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 19-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ALIDE2_RS07155 2a2232e8dd0a1f8a0098020dae9b9611 471 SUPERFAMILY SSF54368 4 102 4.84E-36 T 19-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ALIDE2_RS07155 2a2232e8dd0a1f8a0098020dae9b9611 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 470 7.9E-199 T 19-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ALIDE2_RS07155 2a2232e8dd0a1f8a0098020dae9b9611 471 PANTHER PTHR20852:SF15 4 140 1.9E-251 T 19-04-2016 ALIDE2_RS07155 2a2232e8dd0a1f8a0098020dae9b9611 471 PANTHER PTHR20852:SF15 162 471 1.9E-251 T 19-04-2016 ALIDE2_RS07155 2a2232e8dd0a1f8a0098020dae9b9611 471 Pfam PF00120 Glutamine synthetase, catalytic domain 105 468 2.6E-136 T 19-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ALIDE2_RS07155 2a2232e8dd0a1f8a0098020dae9b9611 471 SUPERFAMILY SSF55931 104 470 1.77E-135 T 19-04-2016 ALIDE2_RS07155 2a2232e8dd0a1f8a0098020dae9b9611 471 Gene3D G3DSA:3.30.590.10 108 457 1.1E-136 T 19-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 ALIDE2_RS07155 2a2232e8dd0a1f8a0098020dae9b9611 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 97 8.6E-29 T 19-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ALIDE2_RS07155 2a2232e8dd0a1f8a0098020dae9b9611 471 SMART SM01230 104 381 4.3E-145 T 19-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ALIDE2_RS07155 2a2232e8dd0a1f8a0098020dae9b9611 471 Gene3D G3DSA:3.10.20.70 5 107 5.7E-40 T 19-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ALIDE2_RS14635 f5f93e9b1480b8a9d1a5e945f9cc4b3f 60 Gene3D G3DSA:2.20.25.10 8 59 3.3E-26 T 19-04-2016 ALIDE2_RS14635 f5f93e9b1480b8a9d1a5e945f9cc4b3f 60 PANTHER PTHR33505 1 60 2.3E-26 T 19-04-2016 ALIDE2_RS14635 f5f93e9b1480b8a9d1a5e945f9cc4b3f 60 Pfam PF03966 Trm112p-like protein 2 41 6.5E-11 T 19-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 ALIDE2_RS14635 f5f93e9b1480b8a9d1a5e945f9cc4b3f 60 SUPERFAMILY SSF158997 1 56 3.14E-21 T 19-04-2016 ALIDE2_RS14635 f5f93e9b1480b8a9d1a5e945f9cc4b3f 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 28.042 T 19-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 ALIDE2_RS12420 5c275a2faa005de9bbe18dd11e50e79e 97 SMART SM00450 1 90 5.0E-10 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS12420 5c275a2faa005de9bbe18dd11e50e79e 97 PANTHER PTHR12231 5 77 9.4E-13 T 19-04-2016 ALIDE2_RS12420 5c275a2faa005de9bbe18dd11e50e79e 97 Pfam PF00581 Rhodanese-like domain 8 76 6.4E-10 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS12420 5c275a2faa005de9bbe18dd11e50e79e 97 SUPERFAMILY SSF52821 7 77 1.31E-23 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS12420 5c275a2faa005de9bbe18dd11e50e79e 97 Gene3D G3DSA:3.40.250.10 8 81 6.0E-22 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS14265 8b23f0b5fc60c88f0869424ef5c5fd2c 505 PANTHER PTHR11699:SF181 10 491 0.0 T 19-04-2016 ALIDE2_RS14265 8b23f0b5fc60c88f0869424ef5c5fd2c 505 PANTHER PTHR11699 10 491 0.0 T 19-04-2016 ALIDE2_RS14265 8b23f0b5fc60c88f0869424ef5c5fd2c 505 Pfam PF00171 Aldehyde dehydrogenase family 22 484 2.8E-140 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS14265 8b23f0b5fc60c88f0869424ef5c5fd2c 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS14265 8b23f0b5fc60c88f0869424ef5c5fd2c 505 Gene3D G3DSA:3.40.605.10 11 268 9.1E-101 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS14265 8b23f0b5fc60c88f0869424ef5c5fd2c 505 Gene3D G3DSA:3.40.309.10 269 449 1.1E-62 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS14265 8b23f0b5fc60c88f0869424ef5c5fd2c 505 SUPERFAMILY SSF53720 9 491 5.24E-147 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS14265 8b23f0b5fc60c88f0869424ef5c5fd2c 505 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 12 488 1.4E-220 T 19-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 ALIDE2_RS01385 dbb87be1c11dc2f43961d9def9c11dd2 486 PANTHER PTHR11699 1 486 2.1E-198 T 19-04-2016 ALIDE2_RS01385 dbb87be1c11dc2f43961d9def9c11dd2 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS01385 dbb87be1c11dc2f43961d9def9c11dd2 486 TIGRFAM TIGR03216 OH_muco_semi_DH: 2-hydroxymuconic semialdehyde dehydrogenase 5 485 9.2E-263 T 19-04-2016 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase GO:0016620|GO:0055114 ALIDE2_RS01385 dbb87be1c11dc2f43961d9def9c11dd2 486 Gene3D G3DSA:3.40.605.10 3 266 2.9E-85 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS01385 dbb87be1c11dc2f43961d9def9c11dd2 486 SUPERFAMILY SSF53720 4 485 3.01E-152 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS01385 dbb87be1c11dc2f43961d9def9c11dd2 486 Gene3D G3DSA:3.40.309.10 267 457 9.9E-62 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS01385 dbb87be1c11dc2f43961d9def9c11dd2 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS01385 dbb87be1c11dc2f43961d9def9c11dd2 486 PANTHER PTHR11699:SF213 1 486 2.1E-198 T 19-04-2016 ALIDE2_RS01385 dbb87be1c11dc2f43961d9def9c11dd2 486 Pfam PF00171 Aldehyde dehydrogenase family 13 482 5.7E-149 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS08250 b3d1b9ef21d17402ed2a7c926fb046b3 947 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 17 947 19.341 T 19-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ALIDE2_RS08250 b3d1b9ef21d17402ed2a7c926fb046b3 947 SUPERFAMILY SSF51621 26 947 1.11E-290 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS08250 b3d1b9ef21d17402ed2a7c926fb046b3 947 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 154 165 - T 19-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ALIDE2_RS08250 b3d1b9ef21d17402ed2a7c926fb046b3 947 Pfam PF00311 Phosphoenolpyruvate carboxylase 151 947 1.9E-285 T 19-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ALIDE2_RS08250 b3d1b9ef21d17402ed2a7c926fb046b3 947 PANTHER PTHR30523:SF0 14 947 0.0 T 19-04-2016 ALIDE2_RS08250 b3d1b9ef21d17402ed2a7c926fb046b3 947 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 591 603 - T 19-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ALIDE2_RS08250 b3d1b9ef21d17402ed2a7c926fb046b3 947 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 153 166 8.0E-43 T 19-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ALIDE2_RS08250 b3d1b9ef21d17402ed2a7c926fb046b3 947 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 272 287 8.0E-43 T 19-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ALIDE2_RS08250 b3d1b9ef21d17402ed2a7c926fb046b3 947 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 638 667 8.0E-43 T 19-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ALIDE2_RS08250 b3d1b9ef21d17402ed2a7c926fb046b3 947 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 771 797 8.0E-43 T 19-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ALIDE2_RS08250 b3d1b9ef21d17402ed2a7c926fb046b3 947 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 423 443 8.0E-43 T 19-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ALIDE2_RS08250 b3d1b9ef21d17402ed2a7c926fb046b3 947 Gene3D G3DSA:1.20.1440.90 301 426 1.3E-29 T 19-04-2016 ALIDE2_RS08250 b3d1b9ef21d17402ed2a7c926fb046b3 947 PANTHER PTHR30523 14 947 0.0 T 19-04-2016 ALIDE2_RS13560 32e488d54817789e7d22193fd4ac95d5 513 SUPERFAMILY SSF52418 174 423 2.09E-66 T 19-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 ALIDE2_RS13560 32e488d54817789e7d22193fd4ac95d5 513 Gene3D G3DSA:3.90.1170.30 425 502 5.0E-18 T 19-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 ALIDE2_RS13560 32e488d54817789e7d22193fd4ac95d5 513 Pfam PF00591 Glycosyl transferase family, a/b domain 180 407 3.2E-8 T 19-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 ALIDE2_RS13560 32e488d54817789e7d22193fd4ac95d5 513 SUPERFAMILY SSF54680 427 506 1.1E-16 T 19-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 ALIDE2_RS13560 32e488d54817789e7d22193fd4ac95d5 513 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 441 502 3.7E-12 T 19-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 ALIDE2_RS13560 32e488d54817789e7d22193fd4ac95d5 513 PANTHER PTHR10515:SF0 81 502 4.3E-124 T 19-04-2016 ALIDE2_RS13560 32e488d54817789e7d22193fd4ac95d5 513 Pfam PF02885 Glycosyl transferase family, helical bundle domain 112 168 3.6E-6 T 19-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain ALIDE2_RS13560 32e488d54817789e7d22193fd4ac95d5 513 SMART SM00941 440 507 1.5E-25 T 19-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 ALIDE2_RS13560 32e488d54817789e7d22193fd4ac95d5 513 PANTHER PTHR10515 81 502 4.3E-124 T 19-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 ALIDE2_RS13560 32e488d54817789e7d22193fd4ac95d5 513 TIGRFAM TIGR02645 ARCH_P_rylase: putative thymidine phosphorylase 23 506 1.2E-179 T 19-04-2016 IPR013466 Thymidine phosphorylase/AMP phosphorylase GO:0016763 ALIDE2_RS13560 32e488d54817789e7d22193fd4ac95d5 513 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 213 228 - T 19-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 ALIDE2_RS13560 32e488d54817789e7d22193fd4ac95d5 513 Hamap MF_00703 Putative thymidine phosphorylase. 19 511 63.785 T 19-04-2016 IPR028579 Putative thymidine phosphorylase KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 ALIDE2_RS13560 32e488d54817789e7d22193fd4ac95d5 513 Gene3D G3DSA:1.20.970.10 107 171 2.5E-9 T 19-04-2016 ALIDE2_RS13560 32e488d54817789e7d22193fd4ac95d5 513 SUPERFAMILY SSF47648 106 173 6.28E-11 T 19-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain ALIDE2_RS13560 32e488d54817789e7d22193fd4ac95d5 513 Gene3D G3DSA:3.40.1030.10 174 424 1.0E-69 T 19-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 ALIDE2_RS16865 1e737ceb98065f6faf842fbbedf5d43a 457 PANTHER PTHR24423:SF354 165 436 6.9E-72 T 19-04-2016 ALIDE2_RS16865 1e737ceb98065f6faf842fbbedf5d43a 457 PANTHER PTHR24423:SF354 6 13 6.9E-72 T 19-04-2016 ALIDE2_RS16865 1e737ceb98065f6faf842fbbedf5d43a 457 SMART SM00304 171 224 2.7E-6 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS16865 1e737ceb98065f6faf842fbbedf5d43a 457 SUPERFAMILY SSF55874 281 436 3.93E-28 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS16865 1e737ceb98065f6faf842fbbedf5d43a 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 291 5.2E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS16865 1e737ceb98065f6faf842fbbedf5d43a 457 PANTHER PTHR24423 165 436 6.9E-72 T 19-04-2016 ALIDE2_RS16865 1e737ceb98065f6faf842fbbedf5d43a 457 PANTHER PTHR24423 6 13 6.9E-72 T 19-04-2016 ALIDE2_RS16865 1e737ceb98065f6faf842fbbedf5d43a 457 SMART SM00387 334 445 2.3E-24 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS16865 1e737ceb98065f6faf842fbbedf5d43a 457 SMART SM00388 225 291 8.1E-11 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS16865 1e737ceb98065f6faf842fbbedf5d43a 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 435 1.3E-14 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS16865 1e737ceb98065f6faf842fbbedf5d43a 457 Gene3D G3DSA:3.30.565.10 279 436 5.5E-28 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS16865 1e737ceb98065f6faf842fbbedf5d43a 457 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 7 441 4.5E-106 T 19-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 ALIDE2_RS16865 1e737ceb98065f6faf842fbbedf5d43a 457 Gene3D G3DSA:1.10.287.130 217 278 1.6E-8 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS16865 1e737ceb98065f6faf842fbbedf5d43a 457 Pfam PF00672 HAMP domain 151 221 1.2E-9 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS16865 1e737ceb98065f6faf842fbbedf5d43a 457 SUPERFAMILY SSF47384 208 291 4.12E-14 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS00305 27100231825e3076ab085fceab3d701d 180 Gene3D G3DSA:3.40.50.1820 2 179 4.9E-46 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS00305 27100231825e3076ab085fceab3d701d 180 SUPERFAMILY SSF53474 5 171 2.95E-31 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS00305 27100231825e3076ab085fceab3d701d 180 Pfam PF06821 Serine hydrolase 6 174 2.7E-59 T 19-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- ALIDE2_RS06020 ea4a6d241d8ea2f54b4094edf74808e4 317 Gene3D G3DSA:1.10.10.10 10 92 1.3E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06020 ea4a6d241d8ea2f54b4094edf74808e4 317 PANTHER PTHR30126 6 313 1.2E-64 T 19-04-2016 ALIDE2_RS06020 ea4a6d241d8ea2f54b4094edf74808e4 317 SUPERFAMILY SSF53850 95 301 9.19E-35 T 19-04-2016 ALIDE2_RS06020 ea4a6d241d8ea2f54b4094edf74808e4 317 Gene3D G3DSA:3.40.190.10 181 266 7.1E-17 T 19-04-2016 ALIDE2_RS06020 ea4a6d241d8ea2f54b4094edf74808e4 317 Pfam PF03466 LysR substrate binding domain 93 298 1.3E-36 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS06020 ea4a6d241d8ea2f54b4094edf74808e4 317 SUPERFAMILY SSF46785 8 115 2.24E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06020 ea4a6d241d8ea2f54b4094edf74808e4 317 Gene3D G3DSA:3.40.190.10 95 180 2.1E-17 T 19-04-2016 ALIDE2_RS06020 ea4a6d241d8ea2f54b4094edf74808e4 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 4.6E-20 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06020 ea4a6d241d8ea2f54b4094edf74808e4 317 PANTHER PTHR30126:SF11 6 313 1.2E-64 T 19-04-2016 ALIDE2_RS06020 ea4a6d241d8ea2f54b4094edf74808e4 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.5E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06020 ea4a6d241d8ea2f54b4094edf74808e4 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.5E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06020 ea4a6d241d8ea2f54b4094edf74808e4 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.5E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS17445 eafba8ca21637b422f8ad7609ca012b1 346 SUPERFAMILY SSF56042 173 342 3.59E-56 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain ALIDE2_RS17445 eafba8ca21637b422f8ad7609ca012b1 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 63 165 4.1E-14 T 19-04-2016 IPR016188 PurM-like, N-terminal domain ALIDE2_RS17445 eafba8ca21637b422f8ad7609ca012b1 346 Gene3D G3DSA:3.90.650.10 174 343 3.1E-62 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain ALIDE2_RS17445 eafba8ca21637b422f8ad7609ca012b1 346 Gene3D G3DSA:3.30.1330.10 24 172 4.1E-62 T 19-04-2016 IPR016188 PurM-like, N-terminal domain ALIDE2_RS17445 eafba8ca21637b422f8ad7609ca012b1 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 179 338 7.8E-35 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain ALIDE2_RS17445 eafba8ca21637b422f8ad7609ca012b1 346 SUPERFAMILY SSF55326 9 171 1.92E-51 T 19-04-2016 ALIDE2_RS17445 eafba8ca21637b422f8ad7609ca012b1 346 PANTHER PTHR10520 9 337 4.8E-199 T 19-04-2016 ALIDE2_RS17445 eafba8ca21637b422f8ad7609ca012b1 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 9 345 45.136 T 19-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 ALIDE2_RS17445 eafba8ca21637b422f8ad7609ca012b1 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 9 336 2.0E-131 T 19-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 ALIDE2_RS11445 c39e138893c508206cd757c0d63ea4a7 440 PANTHER PTHR11662 19 428 3.1E-155 T 19-04-2016 ALIDE2_RS11445 c39e138893c508206cd757c0d63ea4a7 440 SUPERFAMILY SSF103473 17 439 3.53E-84 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS11445 c39e138893c508206cd757c0d63ea4a7 440 Pfam PF07690 Major Facilitator Superfamily 34 399 1.1E-43 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS11445 c39e138893c508206cd757c0d63ea4a7 440 Gene3D G3DSA:1.20.1250.20 251 435 2.5E-20 T 19-04-2016 ALIDE2_RS11445 c39e138893c508206cd757c0d63ea4a7 440 Gene3D G3DSA:1.20.1250.20 26 226 6.8E-47 T 19-04-2016 ALIDE2_RS11445 c39e138893c508206cd757c0d63ea4a7 440 PANTHER PTHR11662:SF3 19 428 3.1E-155 T 19-04-2016 ALIDE2_RS01920 039427818a593e7202feed0d3d0adf47 504 Pfam PF13817 IS66 C-terminal element 460 497 3.1E-18 T 19-04-2016 ALIDE2_RS01920 039427818a593e7202feed0d3d0adf47 504 Pfam PF03050 Transposase IS66 family 172 453 2.4E-102 T 19-04-2016 IPR004291 Transposase, IS66 ALIDE2_RS01920 039427818a593e7202feed0d3d0adf47 504 PANTHER PTHR33678 9 496 7.7E-99 T 19-04-2016 ALIDE2_RS01920 039427818a593e7202feed0d3d0adf47 504 PANTHER PTHR33678:SF1 9 496 7.7E-99 T 19-04-2016 ALIDE2_RS01920 039427818a593e7202feed0d3d0adf47 504 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 158 8.2E-13 T 19-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 ALIDE2_RS01920 039427818a593e7202feed0d3d0adf47 504 Pfam PF13007 Transposase C of IS166 homeodomain 37 109 1.6E-13 T 19-04-2016 IPR024463 Transposase TnpC, homeodomain ALIDE2_RS17485 039427818a593e7202feed0d3d0adf47 504 Pfam PF13817 IS66 C-terminal element 460 497 3.1E-18 T 19-04-2016 ALIDE2_RS17485 039427818a593e7202feed0d3d0adf47 504 Pfam PF03050 Transposase IS66 family 172 453 2.4E-102 T 19-04-2016 IPR004291 Transposase, IS66 ALIDE2_RS17485 039427818a593e7202feed0d3d0adf47 504 PANTHER PTHR33678 9 496 7.7E-99 T 19-04-2016 ALIDE2_RS17485 039427818a593e7202feed0d3d0adf47 504 PANTHER PTHR33678:SF1 9 496 7.7E-99 T 19-04-2016 ALIDE2_RS17485 039427818a593e7202feed0d3d0adf47 504 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 158 8.2E-13 T 19-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 ALIDE2_RS17485 039427818a593e7202feed0d3d0adf47 504 Pfam PF13007 Transposase C of IS166 homeodomain 37 109 1.6E-13 T 19-04-2016 IPR024463 Transposase TnpC, homeodomain ALIDE2_RS12105 039427818a593e7202feed0d3d0adf47 504 Pfam PF13817 IS66 C-terminal element 460 497 3.1E-18 T 19-04-2016 ALIDE2_RS12105 039427818a593e7202feed0d3d0adf47 504 Pfam PF03050 Transposase IS66 family 172 453 2.4E-102 T 19-04-2016 IPR004291 Transposase, IS66 ALIDE2_RS12105 039427818a593e7202feed0d3d0adf47 504 PANTHER PTHR33678 9 496 7.7E-99 T 19-04-2016 ALIDE2_RS12105 039427818a593e7202feed0d3d0adf47 504 PANTHER PTHR33678:SF1 9 496 7.7E-99 T 19-04-2016 ALIDE2_RS12105 039427818a593e7202feed0d3d0adf47 504 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 158 8.2E-13 T 19-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 ALIDE2_RS12105 039427818a593e7202feed0d3d0adf47 504 Pfam PF13007 Transposase C of IS166 homeodomain 37 109 1.6E-13 T 19-04-2016 IPR024463 Transposase TnpC, homeodomain ALIDE2_RS19120 039427818a593e7202feed0d3d0adf47 504 Pfam PF13817 IS66 C-terminal element 460 497 3.1E-18 T 19-04-2016 ALIDE2_RS19120 039427818a593e7202feed0d3d0adf47 504 Pfam PF03050 Transposase IS66 family 172 453 2.4E-102 T 19-04-2016 IPR004291 Transposase, IS66 ALIDE2_RS19120 039427818a593e7202feed0d3d0adf47 504 PANTHER PTHR33678 9 496 7.7E-99 T 19-04-2016 ALIDE2_RS19120 039427818a593e7202feed0d3d0adf47 504 PANTHER PTHR33678:SF1 9 496 7.7E-99 T 19-04-2016 ALIDE2_RS19120 039427818a593e7202feed0d3d0adf47 504 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 158 8.2E-13 T 19-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 ALIDE2_RS19120 039427818a593e7202feed0d3d0adf47 504 Pfam PF13007 Transposase C of IS166 homeodomain 37 109 1.6E-13 T 19-04-2016 IPR024463 Transposase TnpC, homeodomain ALIDE2_RS00985 039427818a593e7202feed0d3d0adf47 504 Pfam PF13817 IS66 C-terminal element 460 497 3.1E-18 T 19-04-2016 ALIDE2_RS00985 039427818a593e7202feed0d3d0adf47 504 Pfam PF03050 Transposase IS66 family 172 453 2.4E-102 T 19-04-2016 IPR004291 Transposase, IS66 ALIDE2_RS00985 039427818a593e7202feed0d3d0adf47 504 PANTHER PTHR33678 9 496 7.7E-99 T 19-04-2016 ALIDE2_RS00985 039427818a593e7202feed0d3d0adf47 504 PANTHER PTHR33678:SF1 9 496 7.7E-99 T 19-04-2016 ALIDE2_RS00985 039427818a593e7202feed0d3d0adf47 504 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 158 8.2E-13 T 19-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 ALIDE2_RS00985 039427818a593e7202feed0d3d0adf47 504 Pfam PF13007 Transposase C of IS166 homeodomain 37 109 1.6E-13 T 19-04-2016 IPR024463 Transposase TnpC, homeodomain ALIDE2_RS15190 039427818a593e7202feed0d3d0adf47 504 Pfam PF13817 IS66 C-terminal element 460 497 3.1E-18 T 19-04-2016 ALIDE2_RS15190 039427818a593e7202feed0d3d0adf47 504 Pfam PF03050 Transposase IS66 family 172 453 2.4E-102 T 19-04-2016 IPR004291 Transposase, IS66 ALIDE2_RS15190 039427818a593e7202feed0d3d0adf47 504 PANTHER PTHR33678 9 496 7.7E-99 T 19-04-2016 ALIDE2_RS15190 039427818a593e7202feed0d3d0adf47 504 PANTHER PTHR33678:SF1 9 496 7.7E-99 T 19-04-2016 ALIDE2_RS15190 039427818a593e7202feed0d3d0adf47 504 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 158 8.2E-13 T 19-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 ALIDE2_RS15190 039427818a593e7202feed0d3d0adf47 504 Pfam PF13007 Transposase C of IS166 homeodomain 37 109 1.6E-13 T 19-04-2016 IPR024463 Transposase TnpC, homeodomain ALIDE2_RS19660 039427818a593e7202feed0d3d0adf47 504 Pfam PF13817 IS66 C-terminal element 460 497 3.1E-18 T 19-04-2016 ALIDE2_RS19660 039427818a593e7202feed0d3d0adf47 504 Pfam PF03050 Transposase IS66 family 172 453 2.4E-102 T 19-04-2016 IPR004291 Transposase, IS66 ALIDE2_RS19660 039427818a593e7202feed0d3d0adf47 504 PANTHER PTHR33678 9 496 7.7E-99 T 19-04-2016 ALIDE2_RS19660 039427818a593e7202feed0d3d0adf47 504 PANTHER PTHR33678:SF1 9 496 7.7E-99 T 19-04-2016 ALIDE2_RS19660 039427818a593e7202feed0d3d0adf47 504 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 158 8.2E-13 T 19-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 ALIDE2_RS19660 039427818a593e7202feed0d3d0adf47 504 Pfam PF13007 Transposase C of IS166 homeodomain 37 109 1.6E-13 T 19-04-2016 IPR024463 Transposase TnpC, homeodomain ALIDE2_RS22485 ba702329334c7ad133c58ad142fbca0f 119 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 8 42 4.5E-6 T 19-04-2016 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal ALIDE2_RS22485 ba702329334c7ad133c58ad142fbca0f 119 PANTHER PTHR34075 6 110 1.3E-18 T 19-04-2016 ALIDE2_RS22485 ba702329334c7ad133c58ad142fbca0f 119 SUPERFAMILY SSF50249 4 110 7.88E-26 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS22485 ba702329334c7ad133c58ad142fbca0f 119 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 44 104 2.3E-14 T 19-04-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 SUPERFAMILY SSF54292 4 103 3.6E-30 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 216 227 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 PANTHER PTHR11615:SF112 5 53 5.9E-219 T 19-04-2016 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 PANTHER PTHR11615:SF112 241 946 5.9E-219 T 19-04-2016 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 Pfam PF01568 Molydopterin dinucleotide binding domain 833 939 2.9E-27 T 19-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 Gene3D G3DSA:2.20.25.90 250 297 1.6E-23 T 19-04-2016 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 Gene3D G3DSA:3.30.70.20 157 222 3.0E-14 T 19-04-2016 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 249 942 7.7E-212 T 19-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 Pfam PF13187 4Fe-4S dicluster domain 172 230 3.6E-7 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 77 2.3E-17 T 19-04-2016 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 Gene3D G3DSA:3.30.70.20 223 249 3.3E-5 T 19-04-2016 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 PIRSF PIRSF036643 1 952 0.0 T 19-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 688 705 - T 19-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 Gene3D G3DSA:3.40.50.740 574 816 3.6E-89 T 19-04-2016 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 Gene3D G3DSA:3.40.50.740 299 390 3.6E-89 T 19-04-2016 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 SUPERFAMILY SSF50692 796 942 4.97E-43 T 19-04-2016 IPR009010 Aspartate decarboxylase-like domain ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 Gene3D G3DSA:2.40.40.20 825 943 4.1E-41 T 19-04-2016 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 PANTHER PTHR11615 5 53 5.9E-219 T 19-04-2016 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 PANTHER PTHR11615 241 946 5.9E-219 T 19-04-2016 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 SUPERFAMILY SSF54862 78 236 1.74E-26 T 19-04-2016 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 Pfam PF00384 Molybdopterin oxidoreductase 299 742 1.9E-83 T 19-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 Gene3D G3DSA:3.10.20.30 4 58 2.5E-9 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 Gene3D G3DSA:3.40.228.10 391 573 1.6E-65 T 19-04-2016 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 SUPERFAMILY SSF53706 245 851 8.25E-194 T 19-04-2016 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 SMART SM00926 243 296 3.2E-19 T 19-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 ALIDE2_RS05225 1dff4c662a9af3b3e414fbc4a57f72f4 953 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 244 295 1.3E-15 T 19-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 ALIDE2_RS02830 3dd4d8bc048973c1ac1b8bb3a4df54a6 327 SMART SM00382 24 167 3.5E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS02830 3dd4d8bc048973c1ac1b8bb3a4df54a6 327 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 28 41 - T 19-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ALIDE2_RS02830 3dd4d8bc048973c1ac1b8bb3a4df54a6 327 SUPERFAMILY SSF52540 2 247 1.07E-68 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02830 3dd4d8bc048973c1ac1b8bb3a4df54a6 327 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 297 317 3.2E-6 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS02830 3dd4d8bc048973c1ac1b8bb3a4df54a6 327 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 280 297 3.2E-6 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS02830 3dd4d8bc048973c1ac1b8bb3a4df54a6 327 Pfam PF00158 Sigma-54 interaction domain 3 170 3.4E-63 T 19-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ALIDE2_RS02830 3dd4d8bc048973c1ac1b8bb3a4df54a6 327 Gene3D G3DSA:3.40.50.300 2 176 1.5E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02830 3dd4d8bc048973c1ac1b8bb3a4df54a6 327 PANTHER PTHR32071 1 327 4.3E-134 T 19-04-2016 ALIDE2_RS02830 3dd4d8bc048973c1ac1b8bb3a4df54a6 327 SUPERFAMILY SSF46689 217 316 8.96E-10 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS02830 3dd4d8bc048973c1ac1b8bb3a4df54a6 327 Gene3D G3DSA:1.10.8.60 177 252 9.9E-26 T 19-04-2016 ALIDE2_RS02830 3dd4d8bc048973c1ac1b8bb3a4df54a6 327 Gene3D G3DSA:1.10.10.60 253 316 2.0E-8 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS02830 3dd4d8bc048973c1ac1b8bb3a4df54a6 327 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 217 226 - T 19-04-2016 IPR025944 Sigma-54 interaction domain, conserved site ALIDE2_RS02830 3dd4d8bc048973c1ac1b8bb3a4df54a6 327 Pfam PF02954 Bacterial regulatory protein, Fis family 276 309 7.6E-6 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS02830 3dd4d8bc048973c1ac1b8bb3a4df54a6 327 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 90 105 - T 19-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ALIDE2_RS18295 1b0b798235f9fbd153053b210300ec5d 336 PANTHER PTHR11101 1 331 8.4E-99 T 19-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 ALIDE2_RS18295 1b0b798235f9fbd153053b210300ec5d 336 Pfam PF01384 Phosphate transporter family 25 167 5.1E-36 T 19-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 ALIDE2_RS18295 1b0b798235f9fbd153053b210300ec5d 336 Pfam PF01384 Phosphate transporter family 170 325 8.6E-54 T 19-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 ALIDE2_RS17580 c902a7f4ec3a64ff35e4b9be2d9becda 646 SUPERFAMILY SSF52540 14 180 1.9E-31 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17580 c902a7f4ec3a64ff35e4b9be2d9becda 646 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 36 54 1.9E-6 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS17580 c902a7f4ec3a64ff35e4b9be2d9becda 646 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 15 35 1.9E-6 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS17580 c902a7f4ec3a64ff35e4b9be2d9becda 646 Pfam PF07670 Nucleoside recognition 483 615 4.9E-28 T 19-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 ALIDE2_RS17580 c902a7f4ec3a64ff35e4b9be2d9becda 646 Pfam PF07670 Nucleoside recognition 311 402 1.1E-10 T 19-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 ALIDE2_RS17580 c902a7f4ec3a64ff35e4b9be2d9becda 646 Pfam PF02421 Ferrous iron transport protein B 14 172 5.4E-51 T 19-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 ALIDE2_RS17580 c902a7f4ec3a64ff35e4b9be2d9becda 646 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 19 611 2.0E-137 T 19-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 ALIDE2_RS17580 c902a7f4ec3a64ff35e4b9be2d9becda 646 PANTHER PTHR11649 226 640 4.6E-220 T 19-04-2016 ALIDE2_RS17580 c902a7f4ec3a64ff35e4b9be2d9becda 646 PANTHER PTHR11649 14 161 4.6E-220 T 19-04-2016 ALIDE2_RS17580 c902a7f4ec3a64ff35e4b9be2d9becda 646 PANTHER PTHR11649:SF37 226 640 4.6E-220 T 19-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 ALIDE2_RS17580 c902a7f4ec3a64ff35e4b9be2d9becda 646 PANTHER PTHR11649:SF37 14 161 4.6E-220 T 19-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 ALIDE2_RS17580 c902a7f4ec3a64ff35e4b9be2d9becda 646 Gene3D G3DSA:3.40.50.300 14 179 1.8E-29 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17580 c902a7f4ec3a64ff35e4b9be2d9becda 646 Pfam PF07664 Ferrous iron transport protein B C terminus 422 478 5.5E-14 T 19-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 Gene3D G3DSA:3.40.50.20 541 664 4.4E-63 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 SUPERFAMILY SSF52440 558 677 3.88E-50 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 Gene3D G3DSA:3.40.50.1380 944 1079 2.5E-42 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1059 0.0 T 19-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 675 880 1.1E-35 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 3.0E-72 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 Gene3D G3DSA:3.30.1490.20 689 746 1.4E-24 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 Gene3D G3DSA:1.10.1030.10 400 540 6.9E-54 T 19-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 Gene3D G3DSA:3.30.1490.20 142 199 2.6E-26 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 SMART SM00851 962 1049 3.8E-30 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1070 13.118 T 19-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 PANTHER PTHR11405 1 1078 0.0 T 19-04-2016 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 SUPERFAMILY SSF48108 396 556 1.44E-51 T 19-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 Pfam PF02142 MGS-like domain 963 1049 2.0E-20 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 PANTHER PTHR11405:SF5 1 1078 0.0 T 19-04-2016 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 711 725 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 SMART SM01096 419 549 1.7E-75 T 19-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 845 852 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 Gene3D G3DSA:3.40.50.20 3 108 8.5E-45 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 Gene3D G3DSA:3.30.470.20 747 941 4.8E-77 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 Gene3D G3DSA:3.30.470.20 200 399 2.2E-77 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1075 13.283 T 19-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 422 549 1.1E-41 T 19-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 SUPERFAMILY SSF56059 675 940 3.01E-101 T 19-04-2016 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 SUPERFAMILY SSF56059 128 401 4.6E-109 T 19-04-2016 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 SUPERFAMILY SSF52440 1 127 2.16E-50 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.8E-66 T 19-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.8E-66 T 19-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.8E-66 T 19-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.8E-66 T 19-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.8E-66 T 19-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.8E-66 T 19-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.8E-66 T 19-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13365 654ab9e957b6d74b17d3ad29a0263034 1083 SUPERFAMILY SSF52335 942 1078 1.05E-38 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain ALIDE2_RS03805 3b8fae1dce594f17efbf7514dc1f40d8 403 SUPERFAMILY SSF56935 30 273 1.47E-53 T 19-04-2016 ALIDE2_RS03805 3b8fae1dce594f17efbf7514dc1f40d8 403 SUPERFAMILY SSF56935 305 403 1.47E-53 T 19-04-2016 ALIDE2_RS03805 3b8fae1dce594f17efbf7514dc1f40d8 403 Gene3D G3DSA:2.40.160.10 304 403 7.3E-60 T 19-04-2016 IPR023614 Porin domain ALIDE2_RS03805 3b8fae1dce594f17efbf7514dc1f40d8 403 Gene3D G3DSA:2.40.160.10 30 272 7.3E-60 T 19-04-2016 IPR023614 Porin domain ALIDE2_RS03805 3b8fae1dce594f17efbf7514dc1f40d8 403 Pfam PF13609 Gram-negative porin 10 375 4.0E-35 T 19-04-2016 ALIDE2_RS03245 792a301a3cff950b82fc715f47142da6 245 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS03245 792a301a3cff950b82fc715f47142da6 245 PIRSF PIRSF039085 1 244 3.4E-100 T 19-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ALIDE2_RS03245 792a301a3cff950b82fc715f47142da6 245 Pfam PF00005 ABC transporter 17 165 3.8E-35 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS03245 792a301a3cff950b82fc715f47142da6 245 Gene3D G3DSA:3.40.50.300 1 231 5.2E-76 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03245 792a301a3cff950b82fc715f47142da6 245 PANTHER PTHR24220:SF317 3 245 2.2E-167 T 19-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 ALIDE2_RS03245 792a301a3cff950b82fc715f47142da6 245 SUPERFAMILY SSF52540 1 230 1.82E-73 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03245 792a301a3cff950b82fc715f47142da6 245 PANTHER PTHR24220 3 245 2.2E-167 T 19-04-2016 ALIDE2_RS03245 792a301a3cff950b82fc715f47142da6 245 SMART SM00382 26 213 1.4E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS17160 98ec1c2312a8334fbad4459eb16fa80b 332 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 315 1.7E-96 T 19-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 ALIDE2_RS17160 98ec1c2312a8334fbad4459eb16fa80b 332 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 245 278 0.0062 T 19-04-2016 IPR001451 Hexapeptide repeat ALIDE2_RS17160 98ec1c2312a8334fbad4459eb16fa80b 332 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 7.9E-6 T 19-04-2016 IPR001451 Hexapeptide repeat ALIDE2_RS17160 98ec1c2312a8334fbad4459eb16fa80b 332 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 208 241 1.9E-4 T 19-04-2016 IPR001451 Hexapeptide repeat ALIDE2_RS17160 98ec1c2312a8334fbad4459eb16fa80b 332 PANTHER PTHR22572 102 281 2.6E-45 T 19-04-2016 ALIDE2_RS17160 98ec1c2312a8334fbad4459eb16fa80b 332 Gene3D G3DSA:2.160.10.10 99 191 1.1E-24 T 19-04-2016 ALIDE2_RS17160 98ec1c2312a8334fbad4459eb16fa80b 332 SUPERFAMILY SSF51161 32 302 6.99E-68 T 19-04-2016 IPR011004 Trimeric LpxA-like ALIDE2_RS17160 98ec1c2312a8334fbad4459eb16fa80b 332 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 91 5.9E-24 T 19-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 ALIDE2_RS17160 98ec1c2312a8334fbad4459eb16fa80b 332 Gene3D G3DSA:2.160.10.10 192 301 2.0E-20 T 19-04-2016 ALIDE2_RS17160 98ec1c2312a8334fbad4459eb16fa80b 332 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 8 312 32.465 T 19-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 ALIDE2_RS17160 98ec1c2312a8334fbad4459eb16fa80b 332 PANTHER PTHR22572:SF117 102 281 2.6E-45 T 19-04-2016 ALIDE2_RS10270 4ae2741b83effac85925eb49b27dbb71 146 PANTHER PTHR10438 28 146 2.8E-42 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ALIDE2_RS10270 4ae2741b83effac85925eb49b27dbb71 146 ProSitePatterns PS00194 Thioredoxin family active site. 61 79 - T 19-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 ALIDE2_RS10270 4ae2741b83effac85925eb49b27dbb71 146 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 142 1.1E-33 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ALIDE2_RS10270 4ae2741b83effac85925eb49b27dbb71 146 SUPERFAMILY SSF52833 28 145 7.66E-39 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS10270 4ae2741b83effac85925eb49b27dbb71 146 PRINTS PR00421 Thioredoxin family signature 108 119 1.4E-9 T 19-04-2016 ALIDE2_RS10270 4ae2741b83effac85925eb49b27dbb71 146 PRINTS PR00421 Thioredoxin family signature 68 77 1.4E-9 T 19-04-2016 ALIDE2_RS10270 4ae2741b83effac85925eb49b27dbb71 146 PRINTS PR00421 Thioredoxin family signature 60 68 1.4E-9 T 19-04-2016 ALIDE2_RS10270 4ae2741b83effac85925eb49b27dbb71 146 Pfam PF00085 Thioredoxin 43 142 8.7E-29 T 19-04-2016 IPR013766 Thioredoxin domain GO:0045454 ALIDE2_RS10270 4ae2741b83effac85925eb49b27dbb71 146 PANTHER PTHR10438:SF266 28 146 2.8E-42 T 19-04-2016 ALIDE2_RS10270 4ae2741b83effac85925eb49b27dbb71 146 Gene3D G3DSA:3.40.30.10 38 144 3.9E-35 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS15230 40dabf8fc9f6888ff8e6a9a51b932f27 676 SUPERFAMILY SSF56672 276 672 1.61E-101 T 19-04-2016 ALIDE2_RS15230 40dabf8fc9f6888ff8e6a9a51b932f27 676 ProSitePatterns PS00116 DNA polymerase family B signature. 434 442 - T 19-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS15230 40dabf8fc9f6888ff8e6a9a51b932f27 676 Pfam PF03104 DNA polymerase family B, exonuclease domain 34 186 1.1E-5 T 19-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS15230 40dabf8fc9f6888ff8e6a9a51b932f27 676 Pfam PF00136 DNA polymerase family B 270 631 8.1E-36 T 19-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS15230 40dabf8fc9f6888ff8e6a9a51b932f27 676 SMART SM00486 34 446 5.6E-57 T 19-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS15230 40dabf8fc9f6888ff8e6a9a51b932f27 676 PANTHER PTHR10322 34 668 1.5E-150 T 19-04-2016 ALIDE2_RS15230 40dabf8fc9f6888ff8e6a9a51b932f27 676 SUPERFAMILY SSF53098 2 280 1.05E-56 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS15230 40dabf8fc9f6888ff8e6a9a51b932f27 676 Gene3D G3DSA:3.90.1600.10 286 322 2.1E-11 T 19-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS15230 40dabf8fc9f6888ff8e6a9a51b932f27 676 Gene3D G3DSA:3.90.1600.10 403 537 2.1E-11 T 19-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS15230 40dabf8fc9f6888ff8e6a9a51b932f27 676 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 306 319 5.8E-9 T 19-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS15230 40dabf8fc9f6888ff8e6a9a51b932f27 676 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 432 440 5.8E-9 T 19-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS15230 40dabf8fc9f6888ff8e6a9a51b932f27 676 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 380 392 5.8E-9 T 19-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS15230 40dabf8fc9f6888ff8e6a9a51b932f27 676 Gene3D G3DSA:3.30.420.10 36 255 1.7E-28 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS18980 fa836daddef910e177f9b83b3c9c72c2 191 Gene3D G3DSA:3.40.30.10 21 191 2.1E-38 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS18980 fa836daddef910e177f9b83b3c9c72c2 191 PANTHER PTHR10681 62 186 2.0E-15 T 19-04-2016 ALIDE2_RS18980 fa836daddef910e177f9b83b3c9c72c2 191 Pfam PF08534 Redoxin 60 180 7.8E-20 T 19-04-2016 IPR013740 Redoxin GO:0016491 ALIDE2_RS18980 fa836daddef910e177f9b83b3c9c72c2 191 SUPERFAMILY SSF52833 22 187 1.02E-30 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS18980 fa836daddef910e177f9b83b3c9c72c2 191 ProSitePatterns PS00194 Thioredoxin family active site. 82 100 - T 19-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 ALIDE2_RS18980 fa836daddef910e177f9b83b3c9c72c2 191 PANTHER PTHR10681:SF107 62 186 2.0E-15 T 19-04-2016 ALIDE2_RS01730 db3c752ded3385523dfecbff90a1a4c0 387 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 281 370 9.8E-21 T 19-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS01730 db3c752ded3385523dfecbff90a1a4c0 387 PANTHER PTHR21581:SF3 25 387 2.1E-97 T 19-04-2016 ALIDE2_RS01730 db3c752ded3385523dfecbff90a1a4c0 387 Gene3D G3DSA:3.40.710.10 15 279 1.3E-94 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS01730 db3c752ded3385523dfecbff90a1a4c0 387 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 26 261 1.5E-75 T 19-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 ALIDE2_RS01730 db3c752ded3385523dfecbff90a1a4c0 387 PANTHER PTHR21581 25 387 2.1E-97 T 19-04-2016 ALIDE2_RS01730 db3c752ded3385523dfecbff90a1a4c0 387 SUPERFAMILY SSF56601 4 279 1.55E-74 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS01730 db3c752ded3385523dfecbff90a1a4c0 387 Gene3D G3DSA:2.60.410.10 281 370 4.8E-26 T 19-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS01730 db3c752ded3385523dfecbff90a1a4c0 387 SMART SM00936 281 371 2.2E-31 T 19-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS01730 db3c752ded3385523dfecbff90a1a4c0 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 4.8E-19 T 19-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ALIDE2_RS01730 db3c752ded3385523dfecbff90a1a4c0 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 4.8E-19 T 19-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ALIDE2_RS01730 db3c752ded3385523dfecbff90a1a4c0 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 4.8E-19 T 19-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ALIDE2_RS01730 db3c752ded3385523dfecbff90a1a4c0 387 SUPERFAMILY SSF69189 281 373 4.32E-22 T 19-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS17600 bb2615c4759e870ecd8ca1b60722a34e 332 SUPERFAMILY SSF46785 1 87 1.69E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17600 bb2615c4759e870ecd8ca1b60722a34e 332 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.9E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS17600 bb2615c4759e870ecd8ca1b60722a34e 332 Gene3D G3DSA:3.40.190.10 177 262 4.7E-18 T 19-04-2016 ALIDE2_RS17600 bb2615c4759e870ecd8ca1b60722a34e 332 PANTHER PTHR30427:SF1 1 311 1.8E-73 T 19-04-2016 ALIDE2_RS17600 bb2615c4759e870ecd8ca1b60722a34e 332 Gene3D G3DSA:3.40.190.10 93 176 1.6E-10 T 19-04-2016 ALIDE2_RS17600 bb2615c4759e870ecd8ca1b60722a34e 332 Gene3D G3DSA:1.10.10.10 1 87 2.1E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17600 bb2615c4759e870ecd8ca1b60722a34e 332 SUPERFAMILY SSF53850 87 295 5.79E-24 T 19-04-2016 ALIDE2_RS17600 bb2615c4759e870ecd8ca1b60722a34e 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.7E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS17600 bb2615c4759e870ecd8ca1b60722a34e 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.7E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS17600 bb2615c4759e870ecd8ca1b60722a34e 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.7E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS17600 bb2615c4759e870ecd8ca1b60722a34e 332 Pfam PF03466 LysR substrate binding domain 87 291 2.0E-26 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS17600 bb2615c4759e870ecd8ca1b60722a34e 332 PANTHER PTHR30427 1 311 1.8E-73 T 19-04-2016 ALIDE2_RS02365 9c69bacda6b46d6327b1203d4a6881c0 182 Pfam PF01814 Hemerythrin HHE cation binding domain 20 159 4.4E-16 T 19-04-2016 IPR012312 Haemerythrin-like ALIDE2_RS02365 9c69bacda6b46d6327b1203d4a6881c0 182 Gene3D G3DSA:1.20.120.520 10 180 8.6E-46 T 19-04-2016 ALIDE2_RS20695 4ac2680a8698e86824f23c1b5eef912a 396 PANTHER PTHR18919:SF110 5 396 1.3E-213 T 19-04-2016 ALIDE2_RS20695 4ac2680a8698e86824f23c1b5eef912a 396 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 394 2.0E-128 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS20695 4ac2680a8698e86824f23c1b5eef912a 396 ProSitePatterns PS00099 Thiolases active site. 377 390 - T 19-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 ALIDE2_RS20695 4ac2680a8698e86824f23c1b5eef912a 396 Gene3D G3DSA:3.40.47.10 199 279 5.6E-67 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS20695 4ac2680a8698e86824f23c1b5eef912a 396 Gene3D G3DSA:3.40.47.10 8 127 5.6E-67 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS20695 4ac2680a8698e86824f23c1b5eef912a 396 Pfam PF02803 Thiolase, C-terminal domain 274 394 1.6E-45 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS20695 4ac2680a8698e86824f23c1b5eef912a 396 Gene3D G3DSA:3.40.47.10 280 395 5.6E-60 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS20695 4ac2680a8698e86824f23c1b5eef912a 396 Gene3D G3DSA:3.40.47.10 146 198 5.6E-60 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS20695 4ac2680a8698e86824f23c1b5eef912a 396 SUPERFAMILY SSF53901 8 272 1.78E-75 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS20695 4ac2680a8698e86824f23c1b5eef912a 396 Pfam PF00108 Thiolase, N-terminal domain 8 266 1.6E-85 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS20695 4ac2680a8698e86824f23c1b5eef912a 396 PIRSF PIRSF000429 2 396 5.7E-120 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS20695 4ac2680a8698e86824f23c1b5eef912a 396 PANTHER PTHR18919 5 396 1.3E-213 T 19-04-2016 ALIDE2_RS20695 4ac2680a8698e86824f23c1b5eef912a 396 SUPERFAMILY SSF53901 274 395 2.54E-44 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS03865 e0aa2b1dffedcfe116e569ce679becf4 342 Gene3D G3DSA:3.40.50.620 1 192 1.2E-44 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS03865 e0aa2b1dffedcfe116e569ce679becf4 342 Gene3D G3DSA:3.90.79.10 197 339 2.7E-33 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS03865 e0aa2b1dffedcfe116e569ce679becf4 342 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 61 4.3E-12 T 19-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ALIDE2_RS03865 e0aa2b1dffedcfe116e569ce679becf4 342 Pfam PF01467 Cytidylyltransferase-like 7 66 1.6E-10 T 19-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ALIDE2_RS03865 e0aa2b1dffedcfe116e569ce679becf4 342 PANTHER PTHR21342 1 151 1.1E-82 T 19-04-2016 ALIDE2_RS03865 e0aa2b1dffedcfe116e569ce679becf4 342 PANTHER PTHR21342 170 331 1.1E-82 T 19-04-2016 ALIDE2_RS03865 e0aa2b1dffedcfe116e569ce679becf4 342 PANTHER PTHR21342:SF0 1 151 1.1E-82 T 19-04-2016 ALIDE2_RS03865 e0aa2b1dffedcfe116e569ce679becf4 342 PANTHER PTHR21342:SF0 170 331 1.1E-82 T 19-04-2016 ALIDE2_RS03865 e0aa2b1dffedcfe116e569ce679becf4 342 Pfam PF00293 NUDIX domain 210 334 3.8E-17 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ALIDE2_RS03865 e0aa2b1dffedcfe116e569ce679becf4 342 SUPERFAMILY SSF52374 5 146 1.61E-19 T 19-04-2016 ALIDE2_RS03865 e0aa2b1dffedcfe116e569ce679becf4 342 SUPERFAMILY SSF55811 187 340 3.38E-28 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS20620 bb8ad452b7b249e285c7bfe272e90f8f 503 Gene3D G3DSA:3.10.105.10 292 471 2.6E-39 T 19-04-2016 ALIDE2_RS20620 bb8ad452b7b249e285c7bfe272e90f8f 503 PANTHER PTHR30290 1 503 1.1E-108 T 19-04-2016 ALIDE2_RS20620 bb8ad452b7b249e285c7bfe272e90f8f 503 PANTHER PTHR30290:SF14 1 503 1.1E-108 T 19-04-2016 ALIDE2_RS20620 bb8ad452b7b249e285c7bfe272e90f8f 503 PIRSF PIRSF002741 3 503 3.1E-86 T 19-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ALIDE2_RS20620 bb8ad452b7b249e285c7bfe272e90f8f 503 Gene3D G3DSA:3.40.190.10 194 291 6.3E-30 T 19-04-2016 ALIDE2_RS20620 bb8ad452b7b249e285c7bfe272e90f8f 503 SUPERFAMILY SSF53850 33 491 8.32E-109 T 19-04-2016 ALIDE2_RS20620 bb8ad452b7b249e285c7bfe272e90f8f 503 Gene3D G3DSA:3.90.76.10 46 193 6.1E-39 T 19-04-2016 ALIDE2_RS20620 bb8ad452b7b249e285c7bfe272e90f8f 503 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 411 4.2E-73 T 19-04-2016 IPR000914 Solute-binding protein family 5 domain ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 PANTHER PTHR23115:SF69 3 181 1.6E-216 T 19-04-2016 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 PANTHER PTHR23115:SF69 247 275 1.6E-216 T 19-04-2016 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 PANTHER PTHR23115:SF69 293 468 1.6E-216 T 19-04-2016 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 Pfam PF16658 Class II release factor RF3, C-terminal domain 391 518 1.9E-42 T 19-04-2016 IPR032090 Peptide chain release factor 3, C-terminal ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 Gene3D G3DSA:3.40.50.300 6 275 2.2E-69 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 19-04-2016 IPR031157 Tr-type G domain, conserved site ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 Gene3D G3DSA:3.30.70.870 399 467 5.0E-15 T 19-04-2016 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 PANTHER PTHR23115 247 275 1.6E-216 T 19-04-2016 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 531 48.561 T 19-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 Pfam PF03144 Elongation factor Tu domain 2 318 384 6.0E-10 T 19-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 Gene3D G3DSA:2.40.30.10 296 397 2.3E-24 T 19-04-2016 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 Pfam PF00009 Elongation factor Tu GTP binding domain 10 273 5.2E-51 T 19-04-2016 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 SUPERFAMILY SSF54980 396 469 9.71E-17 T 19-04-2016 IPR009022 Elongation factor G, III-V domain ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 533 9.5E-199 T 19-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 PRINTS PR00315 GTP-binding elongation factor signature 82 92 1.8E-11 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 PRINTS PR00315 GTP-binding elongation factor signature 134 143 1.8E-11 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 PRINTS PR00315 GTP-binding elongation factor signature 98 109 1.8E-11 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-11 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 PRINTS PR00315 GTP-binding elongation factor signature 62 70 1.8E-11 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 150 3.2E-23 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 SUPERFAMILY SSF52540 7 273 4.53E-85 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 PANTHER PTHR23115 293 468 1.6E-216 T 19-04-2016 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 PANTHER PTHR23115 3 181 1.6E-216 T 19-04-2016 ALIDE2_RS03260 7d37c5c29beb4375d823c2175e1f5479 541 SUPERFAMILY SSF50447 257 395 6.63E-28 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain ALIDE2_RS07060 09a81a0c79538a79dcac515a704ed14d 82 SUPERFAMILY SSF50182 8 70 7.51E-24 T 19-04-2016 IPR010920 LSM domain ALIDE2_RS07060 09a81a0c79538a79dcac515a704ed14d 82 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 4 65 27.549 T 19-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 ALIDE2_RS07060 09a81a0c79538a79dcac515a704ed14d 82 PANTHER PTHR34772:SF1 2 81 2.9E-35 T 19-04-2016 ALIDE2_RS07060 09a81a0c79538a79dcac515a704ed14d 82 PANTHER PTHR34772 2 81 2.9E-35 T 19-04-2016 ALIDE2_RS07060 09a81a0c79538a79dcac515a704ed14d 82 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 8 65 1.8E-28 T 19-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 ALIDE2_RS07060 09a81a0c79538a79dcac515a704ed14d 82 Gene3D G3DSA:2.30.30.100 3 71 1.8E-36 T 19-04-2016 ALIDE2_RS15625 5300b79cbf1ce08ed9b1a749c1753af4 191 PANTHER PTHR23091:SF251 10 172 4.2E-25 T 19-04-2016 ALIDE2_RS15625 5300b79cbf1ce08ed9b1a749c1753af4 191 SUPERFAMILY SSF55729 10 176 6.62E-29 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS15625 5300b79cbf1ce08ed9b1a749c1753af4 191 PANTHER PTHR23091 10 172 4.2E-25 T 19-04-2016 ALIDE2_RS15625 5300b79cbf1ce08ed9b1a749c1753af4 191 Pfam PF00583 Acetyltransferase (GNAT) family 71 151 5.4E-15 T 19-04-2016 IPR000182 GNAT domain GO:0008080 ALIDE2_RS15625 5300b79cbf1ce08ed9b1a749c1753af4 191 Gene3D G3DSA:3.40.630.30 14 176 2.7E-27 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS15675 ebdf51c34a4552dabff05a374a8d105a 405 PANTHER PTHR11751 18 405 3.0E-145 T 19-04-2016 ALIDE2_RS15675 ebdf51c34a4552dabff05a374a8d105a 405 PANTHER PTHR11751:SF306 18 405 3.0E-145 T 19-04-2016 ALIDE2_RS15675 ebdf51c34a4552dabff05a374a8d105a 405 SUPERFAMILY SSF53383 8 401 2.18E-109 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS15675 ebdf51c34a4552dabff05a374a8d105a 405 Gene3D G3DSA:3.90.1150.10 280 403 6.3E-41 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS15675 ebdf51c34a4552dabff05a374a8d105a 405 Gene3D G3DSA:3.40.640.10 49 279 6.3E-72 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS15675 ebdf51c34a4552dabff05a374a8d105a 405 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 240 253 - T 19-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 ALIDE2_RS15675 ebdf51c34a4552dabff05a374a8d105a 405 Pfam PF00155 Aminotransferase class I and II 36 396 3.2E-75 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ALIDE2_RS10500 91b4a759246ed23f946fbff1abc6ed46 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 121 3.2E-8 T 19-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ALIDE2_RS10500 91b4a759246ed23f946fbff1abc6ed46 127 Gene3D G3DSA:3.10.180.10 6 124 2.7E-30 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS10500 91b4a759246ed23f946fbff1abc6ed46 127 PANTHER PTHR21366:SF15 1 123 1.1E-52 T 19-04-2016 ALIDE2_RS10500 91b4a759246ed23f946fbff1abc6ed46 127 SUPERFAMILY SSF54593 1 121 4.26E-25 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS10500 91b4a759246ed23f946fbff1abc6ed46 127 PANTHER PTHR21366 1 123 1.1E-52 T 19-04-2016 ALIDE2_RS14595 2caefe0decd6edf5df64ab35ab3e33dd 419 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 306 325 - T 19-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 ALIDE2_RS14595 2caefe0decd6edf5df64ab35ab3e33dd 419 SUPERFAMILY SSF53659 4 419 1.88E-143 T 19-04-2016 ALIDE2_RS14595 2caefe0decd6edf5df64ab35ab3e33dd 419 PANTHER PTHR11835:SF52 191 258 8.6E-239 T 19-04-2016 ALIDE2_RS14595 2caefe0decd6edf5df64ab35ab3e33dd 419 PANTHER PTHR11835:SF52 278 419 8.6E-239 T 19-04-2016 ALIDE2_RS14595 2caefe0decd6edf5df64ab35ab3e33dd 419 PANTHER PTHR11835:SF52 4 167 8.6E-239 T 19-04-2016 ALIDE2_RS14595 2caefe0decd6edf5df64ab35ab3e33dd 419 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 32 413 7.4E-114 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS14595 2caefe0decd6edf5df64ab35ab3e33dd 419 Gene3D G3DSA:3.40.718.10 14 419 1.5E-160 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS14595 2caefe0decd6edf5df64ab35ab3e33dd 419 PANTHER PTHR11835 191 258 8.6E-239 T 19-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 ALIDE2_RS14595 2caefe0decd6edf5df64ab35ab3e33dd 419 PANTHER PTHR11835 278 419 8.6E-239 T 19-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 ALIDE2_RS14595 2caefe0decd6edf5df64ab35ab3e33dd 419 PANTHER PTHR11835 4 167 8.6E-239 T 19-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 ALIDE2_RS14595 2caefe0decd6edf5df64ab35ab3e33dd 419 SMART SM01329 31 415 7.6E-172 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS14595 2caefe0decd6edf5df64ab35ab3e33dd 419 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 4 419 1.1E-222 T 19-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 Gene3D G3DSA:1.10.150.300 131 201 2.2E-25 T 19-04-2016 IPR023192 TGS-like domain ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 SUPERFAMILY SSF52540 3 302 3.72E-85 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 1.2E-38 T 19-04-2016 IPR013029 Domain of unknown function DUF933 ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.7E-34 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.7E-34 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.7E-34 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.7E-34 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 Gene3D G3DSA:3.10.20.30 269 364 2.3E-49 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 Gene3D G3DSA:3.40.50.300 4 130 3.9E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 Gene3D G3DSA:3.40.50.300 202 268 3.9E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 PIRSF PIRSF006641 1 364 1.3E-152 T 19-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 4.9E-153 T 19-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 SUPERFAMILY SSF81271 280 360 6.98E-35 T 19-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 Pfam PF01926 50S ribosome-binding GTPase 5 115 2.6E-22 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 PANTHER PTHR23305 1 364 4.6E-203 T 19-04-2016 ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 PANTHER PTHR23305:SF12 1 364 4.6E-203 T 19-04-2016 ALIDE2_RS19090 7607157e1853f7e1751a26f31a267e19 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 364 44.022 T 19-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 ALIDE2_RS08365 1094654b034b0a0af3b3c6f917376694 398 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 390 1.3E-122 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS08365 1094654b034b0a0af3b3c6f917376694 398 Gene3D G3DSA:3.40.47.10 155 192 9.9E-46 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS08365 1094654b034b0a0af3b3c6f917376694 398 Gene3D G3DSA:3.40.47.10 276 391 9.9E-46 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS08365 1094654b034b0a0af3b3c6f917376694 398 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 19-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 ALIDE2_RS08365 1094654b034b0a0af3b3c6f917376694 398 SUPERFAMILY SSF53901 7 269 8.77E-70 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS08365 1094654b034b0a0af3b3c6f917376694 398 PIRSF PIRSF000429 1 393 9.3E-116 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS08365 1094654b034b0a0af3b3c6f917376694 398 Gene3D G3DSA:3.40.47.10 193 275 4.5E-65 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS08365 1094654b034b0a0af3b3c6f917376694 398 Gene3D G3DSA:3.40.47.10 7 126 4.5E-65 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS08365 1094654b034b0a0af3b3c6f917376694 398 PANTHER PTHR18919 1 393 2.4E-167 T 19-04-2016 ALIDE2_RS08365 1094654b034b0a0af3b3c6f917376694 398 SUPERFAMILY SSF53901 270 391 1.84E-35 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS08365 1094654b034b0a0af3b3c6f917376694 398 Pfam PF00108 Thiolase, N-terminal domain 7 261 1.9E-65 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS08365 1094654b034b0a0af3b3c6f917376694 398 Pfam PF02803 Thiolase, C-terminal domain 270 391 1.4E-34 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS08365 1094654b034b0a0af3b3c6f917376694 398 PANTHER PTHR18919:SF71 1 393 2.4E-167 T 19-04-2016 ALIDE2_RS24135 c8ecfee394702b0e3f9c419efb8e777c 354 Gene3D G3DSA:3.30.565.10 229 263 1.6E-4 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS24135 c8ecfee394702b0e3f9c419efb8e777c 354 Gene3D G3DSA:1.10.287.130 167 228 2.1E-18 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS24135 c8ecfee394702b0e3f9c419efb8e777c 354 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 28 155 1.5E-8 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS24135 c8ecfee394702b0e3f9c419efb8e777c 354 Gene3D G3DSA:3.30.450.20 19 138 2.7E-15 T 19-04-2016 ALIDE2_RS24135 c8ecfee394702b0e3f9c419efb8e777c 354 PANTHER PTHR24423:SF522 27 275 7.2E-59 T 19-04-2016 ALIDE2_RS24135 c8ecfee394702b0e3f9c419efb8e777c 354 SMART SM00091 30 96 0.0033 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS24135 c8ecfee394702b0e3f9c419efb8e777c 354 SMART SM00086 107 149 0.0078 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS24135 c8ecfee394702b0e3f9c419efb8e777c 354 PANTHER PTHR24423 27 275 7.2E-59 T 19-04-2016 ALIDE2_RS24135 c8ecfee394702b0e3f9c419efb8e777c 354 Pfam PF00512 His Kinase A (phospho-acceptor) domain 177 242 2.1E-18 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS24135 c8ecfee394702b0e3f9c419efb8e777c 354 Pfam PF08448 PAS fold 36 150 1.8E-11 T 19-04-2016 IPR013656 PAS fold-4 ALIDE2_RS24135 c8ecfee394702b0e3f9c419efb8e777c 354 SUPERFAMILY SSF47384 162 244 1.1E-19 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS24135 c8ecfee394702b0e3f9c419efb8e777c 354 SMART SM00388 176 243 4.0E-18 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS24135 c8ecfee394702b0e3f9c419efb8e777c 354 SUPERFAMILY SSF55785 18 147 8.72E-16 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 Gene3D G3DSA:1.10.287.130 198 258 2.3E-22 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 SMART SM00387 327 440 5.0E-38 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 271 1.0E-20 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 Gene3D G3DSA:3.30.450.20 96 197 1.5E-12 T 19-04-2016 ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 SUPERFAMILY SSF55874 261 438 4.06E-39 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 436 1.4E-116 T 19-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 5.9E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 5.9E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 5.9E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 5.9E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 Gene3D G3DSA:3.30.565.10 259 440 8.5E-42 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 PANTHER PTHR24423 76 445 2.4E-104 T 19-04-2016 ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 SMART SM00091 96 163 1.1E-6 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 SMART SM00388 206 272 1.3E-22 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 438 2.2E-20 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 Pfam PF11808 Domain of unknown function (DUF3329) 3 87 3.3E-9 T 19-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 SUPERFAMILY SSF55785 83 196 2.79E-9 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 SUPERFAMILY SSF47384 193 271 2.55E-21 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 Pfam PF13188 PAS domain 100 148 4.0E-8 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS13265 744d0787fb826b3dc1878367c40733b1 458 PANTHER PTHR24423:SF554 76 445 2.4E-104 T 19-04-2016 ALIDE2_RS11745 39936aecf0a523a43c6950494b5007c9 313 SUPERFAMILY SSF46785 1 84 8.71E-12 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11745 39936aecf0a523a43c6950494b5007c9 313 PANTHER PTHR30126:SF6 1 309 9.2E-126 T 19-04-2016 ALIDE2_RS11745 39936aecf0a523a43c6950494b5007c9 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.4E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11745 39936aecf0a523a43c6950494b5007c9 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.4E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11745 39936aecf0a523a43c6950494b5007c9 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.4E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11745 39936aecf0a523a43c6950494b5007c9 313 Gene3D G3DSA:1.10.10.10 1 81 2.5E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11745 39936aecf0a523a43c6950494b5007c9 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 64 2.8E-14 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11745 39936aecf0a523a43c6950494b5007c9 313 PANTHER PTHR30126 1 309 9.2E-126 T 19-04-2016 ALIDE2_RS11745 39936aecf0a523a43c6950494b5007c9 313 Gene3D G3DSA:3.40.190.10 180 261 2.6E-28 T 19-04-2016 ALIDE2_RS11745 39936aecf0a523a43c6950494b5007c9 313 Gene3D G3DSA:3.40.190.10 91 179 1.6E-20 T 19-04-2016 ALIDE2_RS11745 39936aecf0a523a43c6950494b5007c9 313 SUPERFAMILY SSF53850 91 298 1.9E-40 T 19-04-2016 ALIDE2_RS11745 39936aecf0a523a43c6950494b5007c9 313 Pfam PF03466 LysR substrate binding domain 89 295 6.3E-42 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS01095 ded45d21c594930384a0c19dfc04bd7f 267 Gene3D G3DSA:3.40.50.300 74 235 5.6E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01095 ded45d21c594930384a0c19dfc04bd7f 267 SUPERFAMILY SSF52540 74 234 4.65E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01095 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS01095 ded45d21c594930384a0c19dfc04bd7f 267 Pfam PF01695 IstB-like ATP binding protein 58 233 5.2E-65 T 19-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 ALIDE2_RS01095 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050:SF6 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS01095 ded45d21c594930384a0c19dfc04bd7f 267 PIRSF PIRSF003073 4 256 1.3E-71 T 19-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ALIDE2_RS01095 ded45d21c594930384a0c19dfc04bd7f 267 SMART SM00382 101 238 9.8E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS14730 ded45d21c594930384a0c19dfc04bd7f 267 Gene3D G3DSA:3.40.50.300 74 235 5.6E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14730 ded45d21c594930384a0c19dfc04bd7f 267 SUPERFAMILY SSF52540 74 234 4.65E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14730 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS14730 ded45d21c594930384a0c19dfc04bd7f 267 Pfam PF01695 IstB-like ATP binding protein 58 233 5.2E-65 T 19-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 ALIDE2_RS14730 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050:SF6 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS14730 ded45d21c594930384a0c19dfc04bd7f 267 PIRSF PIRSF003073 4 256 1.3E-71 T 19-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ALIDE2_RS14730 ded45d21c594930384a0c19dfc04bd7f 267 SMART SM00382 101 238 9.8E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS10745 ded45d21c594930384a0c19dfc04bd7f 267 Gene3D G3DSA:3.40.50.300 74 235 5.6E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10745 ded45d21c594930384a0c19dfc04bd7f 267 SUPERFAMILY SSF52540 74 234 4.65E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10745 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS10745 ded45d21c594930384a0c19dfc04bd7f 267 Pfam PF01695 IstB-like ATP binding protein 58 233 5.2E-65 T 19-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 ALIDE2_RS10745 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050:SF6 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS10745 ded45d21c594930384a0c19dfc04bd7f 267 PIRSF PIRSF003073 4 256 1.3E-71 T 19-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ALIDE2_RS10745 ded45d21c594930384a0c19dfc04bd7f 267 SMART SM00382 101 238 9.8E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS10970 ded45d21c594930384a0c19dfc04bd7f 267 Gene3D G3DSA:3.40.50.300 74 235 5.6E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10970 ded45d21c594930384a0c19dfc04bd7f 267 SUPERFAMILY SSF52540 74 234 4.65E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10970 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS10970 ded45d21c594930384a0c19dfc04bd7f 267 Pfam PF01695 IstB-like ATP binding protein 58 233 5.2E-65 T 19-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 ALIDE2_RS10970 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050:SF6 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS10970 ded45d21c594930384a0c19dfc04bd7f 267 PIRSF PIRSF003073 4 256 1.3E-71 T 19-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ALIDE2_RS10970 ded45d21c594930384a0c19dfc04bd7f 267 SMART SM00382 101 238 9.8E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS17515 ded45d21c594930384a0c19dfc04bd7f 267 Gene3D G3DSA:3.40.50.300 74 235 5.6E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17515 ded45d21c594930384a0c19dfc04bd7f 267 SUPERFAMILY SSF52540 74 234 4.65E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17515 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS17515 ded45d21c594930384a0c19dfc04bd7f 267 Pfam PF01695 IstB-like ATP binding protein 58 233 5.2E-65 T 19-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 ALIDE2_RS17515 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050:SF6 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS17515 ded45d21c594930384a0c19dfc04bd7f 267 PIRSF PIRSF003073 4 256 1.3E-71 T 19-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ALIDE2_RS17515 ded45d21c594930384a0c19dfc04bd7f 267 SMART SM00382 101 238 9.8E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS21400 ded45d21c594930384a0c19dfc04bd7f 267 Gene3D G3DSA:3.40.50.300 74 235 5.6E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21400 ded45d21c594930384a0c19dfc04bd7f 267 SUPERFAMILY SSF52540 74 234 4.65E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21400 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS21400 ded45d21c594930384a0c19dfc04bd7f 267 Pfam PF01695 IstB-like ATP binding protein 58 233 5.2E-65 T 19-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 ALIDE2_RS21400 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050:SF6 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS21400 ded45d21c594930384a0c19dfc04bd7f 267 PIRSF PIRSF003073 4 256 1.3E-71 T 19-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ALIDE2_RS21400 ded45d21c594930384a0c19dfc04bd7f 267 SMART SM00382 101 238 9.8E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS03365 ded45d21c594930384a0c19dfc04bd7f 267 Gene3D G3DSA:3.40.50.300 74 235 5.6E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03365 ded45d21c594930384a0c19dfc04bd7f 267 SUPERFAMILY SSF52540 74 234 4.65E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03365 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS03365 ded45d21c594930384a0c19dfc04bd7f 267 Pfam PF01695 IstB-like ATP binding protein 58 233 5.2E-65 T 19-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 ALIDE2_RS03365 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050:SF6 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS03365 ded45d21c594930384a0c19dfc04bd7f 267 PIRSF PIRSF003073 4 256 1.3E-71 T 19-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ALIDE2_RS03365 ded45d21c594930384a0c19dfc04bd7f 267 SMART SM00382 101 238 9.8E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS09385 ded45d21c594930384a0c19dfc04bd7f 267 Gene3D G3DSA:3.40.50.300 74 235 5.6E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09385 ded45d21c594930384a0c19dfc04bd7f 267 SUPERFAMILY SSF52540 74 234 4.65E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09385 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS09385 ded45d21c594930384a0c19dfc04bd7f 267 Pfam PF01695 IstB-like ATP binding protein 58 233 5.2E-65 T 19-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 ALIDE2_RS09385 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050:SF6 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS09385 ded45d21c594930384a0c19dfc04bd7f 267 PIRSF PIRSF003073 4 256 1.3E-71 T 19-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ALIDE2_RS09385 ded45d21c594930384a0c19dfc04bd7f 267 SMART SM00382 101 238 9.8E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS04390 ded45d21c594930384a0c19dfc04bd7f 267 Gene3D G3DSA:3.40.50.300 74 235 5.6E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04390 ded45d21c594930384a0c19dfc04bd7f 267 SUPERFAMILY SSF52540 74 234 4.65E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04390 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS04390 ded45d21c594930384a0c19dfc04bd7f 267 Pfam PF01695 IstB-like ATP binding protein 58 233 5.2E-65 T 19-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 ALIDE2_RS04390 ded45d21c594930384a0c19dfc04bd7f 267 PANTHER PTHR30050:SF6 8 265 2.1E-73 T 19-04-2016 ALIDE2_RS04390 ded45d21c594930384a0c19dfc04bd7f 267 PIRSF PIRSF003073 4 256 1.3E-71 T 19-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ALIDE2_RS04390 ded45d21c594930384a0c19dfc04bd7f 267 SMART SM00382 101 238 9.8E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS00505 c6b43b8edebb0de9ffa1d52f86c7739b 140 PANTHER PTHR31964 1 140 2.1E-21 T 19-04-2016 ALIDE2_RS00505 c6b43b8edebb0de9ffa1d52f86c7739b 140 Pfam PF00582 Universal stress protein family 2 140 1.4E-25 T 19-04-2016 IPR006016 UspA GO:0006950 ALIDE2_RS00505 c6b43b8edebb0de9ffa1d52f86c7739b 140 PRINTS PR01438 Universal stress protein signature 118 140 1.0E-9 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS00505 c6b43b8edebb0de9ffa1d52f86c7739b 140 PRINTS PR01438 Universal stress protein signature 100 112 1.0E-9 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS00505 c6b43b8edebb0de9ffa1d52f86c7739b 140 Gene3D G3DSA:3.40.50.620 2 140 1.1E-32 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS00505 c6b43b8edebb0de9ffa1d52f86c7739b 140 SUPERFAMILY SSF52402 2 140 1.05E-29 T 19-04-2016 ALIDE2_RS20685 76a79152539b67dc66ee6a8256adcc54 376 Gene3D G3DSA:1.10.540.10 3 117 3.0E-41 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS20685 76a79152539b67dc66ee6a8256adcc54 376 SUPERFAMILY SSF56645 2 240 1.57E-81 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS20685 76a79152539b67dc66ee6a8256adcc54 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 7.5E-49 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS20685 76a79152539b67dc66ee6a8256adcc54 376 Gene3D G3DSA:1.20.140.10 216 375 3.7E-69 T 19-04-2016 ALIDE2_RS20685 76a79152539b67dc66ee6a8256adcc54 376 SUPERFAMILY SSF47203 226 375 6.44E-56 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS20685 76a79152539b67dc66ee6a8256adcc54 376 PANTHER PTHR10909 1 376 5.0E-167 T 19-04-2016 ALIDE2_RS20685 76a79152539b67dc66ee6a8256adcc54 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 1.0E-35 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS20685 76a79152539b67dc66ee6a8256adcc54 376 Gene3D G3DSA:2.40.110.10 119 215 9.3E-40 T 19-04-2016 ALIDE2_RS20685 76a79152539b67dc66ee6a8256adcc54 376 PANTHER PTHR10909:SF305 1 376 5.0E-167 T 19-04-2016 ALIDE2_RS20685 76a79152539b67dc66ee6a8256adcc54 376 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS20685 76a79152539b67dc66ee6a8256adcc54 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 2.5E-24 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 150 3.3E-26 T 19-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 Gene3D G3DSA:2.170.120.12 65 173 1.7E-44 T 19-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 258 328 1.0E-34 T 19-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 318 1.0E-108 T 19-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 SMART SM00662 20 230 9.8E-100 T 19-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 224 1.3E-21 T 19-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 Gene3D G3DSA:1.10.150.20 250 326 2.6E-36 T 19-04-2016 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 254 310 9.2E-25 T 19-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 2 319 35.712 T 19-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 PANTHER PTHR32108:SF0 6 331 3.1E-142 T 19-04-2016 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 Gene3D G3DSA:3.30.1360.10 6 64 8.0E-11 T 19-04-2016 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 SUPERFAMILY SSF56553 50 174 1.31E-43 T 19-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 SUPERFAMILY SSF55257 4 50 9.81E-30 T 19-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 SUPERFAMILY SSF55257 175 229 9.81E-30 T 19-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 PANTHER PTHR32108 6 331 3.1E-142 T 19-04-2016 ALIDE2_RS21575 1fa624edbb30c1e5a41777ad9844d8a1 331 SUPERFAMILY SSF47789 253 325 4.19E-27 T 19-04-2016 ALIDE2_RS08035 6d711afe8b5da0ae8c0156908a7cc85b 176 Pfam PF13527 Acetyltransferase (GNAT) domain 9 137 1.4E-13 T 19-04-2016 ALIDE2_RS08035 6d711afe8b5da0ae8c0156908a7cc85b 176 SUPERFAMILY SSF55729 7 155 8.23E-29 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS08035 6d711afe8b5da0ae8c0156908a7cc85b 176 PANTHER PTHR23091 6 157 1.4E-30 T 19-04-2016 ALIDE2_RS08035 6d711afe8b5da0ae8c0156908a7cc85b 176 PANTHER PTHR23091:SF237 6 157 1.4E-30 T 19-04-2016 ALIDE2_RS08035 6d711afe8b5da0ae8c0156908a7cc85b 176 Gene3D G3DSA:3.40.630.30 7 140 1.4E-21 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS00080 09e5064acda778366ff499952bc68776 340 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 63 336 1.3E-57 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00080 09e5064acda778366ff499952bc68776 340 PANTHER PTHR30349 46 297 8.6E-74 T 19-04-2016 ALIDE2_RS00080 09e5064acda778366ff499952bc68776 340 PANTHER PTHR30349:SF32 46 297 8.6E-74 T 19-04-2016 ALIDE2_RS00080 09e5064acda778366ff499952bc68776 340 SUPERFAMILY SSF53850 93 297 7.27E-10 T 19-04-2016 ALIDE2_RS00080 09e5064acda778366ff499952bc68776 340 PIRSF PIRSF017082 7 340 3.5E-55 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS04930 7b566dc3469d26607452ad6fd25e79c8 452 PANTHER PTHR11851 39 447 1.8E-65 T 19-04-2016 ALIDE2_RS04930 7b566dc3469d26607452ad6fd25e79c8 452 Pfam PF05193 Peptidase M16 inactive domain 202 384 1.4E-31 T 19-04-2016 IPR007863 Peptidase M16, C-terminal ALIDE2_RS04930 7b566dc3469d26607452ad6fd25e79c8 452 SUPERFAMILY SSF63411 28 254 4.02E-35 T 19-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ALIDE2_RS04930 7b566dc3469d26607452ad6fd25e79c8 452 PANTHER PTHR11851:SF140 39 447 1.8E-65 T 19-04-2016 ALIDE2_RS04930 7b566dc3469d26607452ad6fd25e79c8 452 Gene3D G3DSA:3.30.830.10 34 250 2.6E-32 T 19-04-2016 IPR011237 Peptidase M16 domain GO:0046872 ALIDE2_RS04930 7b566dc3469d26607452ad6fd25e79c8 452 SUPERFAMILY SSF63411 266 449 2.17E-46 T 19-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ALIDE2_RS04930 7b566dc3469d26607452ad6fd25e79c8 452 Gene3D G3DSA:3.30.830.10 277 449 1.4E-37 T 19-04-2016 IPR011237 Peptidase M16 domain GO:0046872 ALIDE2_RS23195 d4a06e0511c4cf9a72977a405d62a5af 286 Pfam PF01614 Bacterial transcriptional regulator 162 280 9.1E-12 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS23195 d4a06e0511c4cf9a72977a405d62a5af 286 PANTHER PTHR30136 15 284 2.5E-69 T 19-04-2016 ALIDE2_RS23195 d4a06e0511c4cf9a72977a405d62a5af 286 Gene3D G3DSA:3.30.450.40 110 283 4.4E-35 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS23195 d4a06e0511c4cf9a72977a405d62a5af 286 Gene3D G3DSA:1.10.10.10 34 108 1.3E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23195 d4a06e0511c4cf9a72977a405d62a5af 286 SMART SM00346 39 129 3.7E-17 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS23195 d4a06e0511c4cf9a72977a405d62a5af 286 SUPERFAMILY SSF55781 106 284 2.42E-36 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS23195 d4a06e0511c4cf9a72977a405d62a5af 286 Pfam PF09339 IclR helix-turn-helix domain 42 91 1.2E-12 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS23195 d4a06e0511c4cf9a72977a405d62a5af 286 SUPERFAMILY SSF46785 42 112 3.01E-9 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23195 d4a06e0511c4cf9a72977a405d62a5af 286 PANTHER PTHR30136:SF4 15 284 2.5E-69 T 19-04-2016 ALIDE2_RS07965 89bcb0b04e1e9f2530651cfa8d95face 212 PANTHER PTHR13696:SF54 1 209 4.3E-62 T 19-04-2016 ALIDE2_RS07965 89bcb0b04e1e9f2530651cfa8d95face 212 SUPERFAMILY SSF52540 1 210 3.69E-42 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07965 89bcb0b04e1e9f2530651cfa8d95face 212 PIRSF PIRSF009320 1 210 7.4E-50 T 19-04-2016 ALIDE2_RS07965 89bcb0b04e1e9f2530651cfa8d95face 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 156 2.1E-25 T 19-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE2_RS07965 89bcb0b04e1e9f2530651cfa8d95face 212 Gene3D G3DSA:3.40.50.300 1 210 2.5E-38 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07965 89bcb0b04e1e9f2530651cfa8d95face 212 PANTHER PTHR13696 1 209 4.3E-62 T 19-04-2016 ALIDE2_RS00670 59473980ded9fa1b319fc33f6915fec1 332 SUPERFAMILY SSF53850 130 295 4.07E-11 T 19-04-2016 ALIDE2_RS00670 59473980ded9fa1b319fc33f6915fec1 332 PANTHER PTHR30349:SF32 19 325 1.1E-87 T 19-04-2016 ALIDE2_RS00670 59473980ded9fa1b319fc33f6915fec1 332 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 57 328 1.8E-82 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00670 59473980ded9fa1b319fc33f6915fec1 332 PIRSF PIRSF017082 4 331 6.3E-82 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00670 59473980ded9fa1b319fc33f6915fec1 332 PANTHER PTHR30349 19 325 1.1E-87 T 19-04-2016 ALIDE2_RS22400 65952aefa951fd2d5e315223ad6b6ed9 276 PANTHER PTHR24321 13 273 7.5E-55 T 19-04-2016 ALIDE2_RS22400 65952aefa951fd2d5e315223ad6b6ed9 276 PANTHER PTHR24321:SF6 13 273 7.5E-55 T 19-04-2016 ALIDE2_RS22400 65952aefa951fd2d5e315223ad6b6ed9 276 SUPERFAMILY SSF51735 13 273 2.32E-78 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22400 65952aefa951fd2d5e315223ad6b6ed9 276 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 29 272 3.4E-63 T 19-04-2016 ALIDE2_RS22400 65952aefa951fd2d5e315223ad6b6ed9 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 98 109 1.1E-10 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22400 65952aefa951fd2d5e315223ad6b6ed9 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 1.1E-10 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22400 65952aefa951fd2d5e315223ad6b6ed9 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 1.1E-10 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22400 65952aefa951fd2d5e315223ad6b6ed9 276 Gene3D G3DSA:3.40.50.720 12 273 1.2E-82 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22400 65952aefa951fd2d5e315223ad6b6ed9 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 4.8E-33 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22400 65952aefa951fd2d5e315223ad6b6ed9 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 98 109 4.8E-33 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22400 65952aefa951fd2d5e315223ad6b6ed9 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 4.8E-33 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22400 65952aefa951fd2d5e315223ad6b6ed9 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 235 255 4.8E-33 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22400 65952aefa951fd2d5e315223ad6b6ed9 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 24 41 4.8E-33 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22400 65952aefa951fd2d5e315223ad6b6ed9 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 4.8E-33 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15645 bb0f0b328b4a8347bc13c7d68fd464a6 328 PIRSF PIRSF017082 2 327 7.6E-69 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS15645 bb0f0b328b4a8347bc13c7d68fd464a6 328 SUPERFAMILY SSF53850 117 289 7.53E-14 T 19-04-2016 ALIDE2_RS15645 bb0f0b328b4a8347bc13c7d68fd464a6 328 PANTHER PTHR30349 4 313 6.9E-66 T 19-04-2016 ALIDE2_RS15645 bb0f0b328b4a8347bc13c7d68fd464a6 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 323 1.0E-70 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS15645 bb0f0b328b4a8347bc13c7d68fd464a6 328 PANTHER PTHR30349:SF16 4 313 6.9E-66 T 19-04-2016 ALIDE2_RS18040 5b9f836dca7321a65cc60427bed1b868 309 Gene3D G3DSA:3.40.190.10 191 263 2.6E-11 T 19-04-2016 ALIDE2_RS18040 5b9f836dca7321a65cc60427bed1b868 309 SUPERFAMILY SSF53850 92 297 1.52E-28 T 19-04-2016 ALIDE2_RS18040 5b9f836dca7321a65cc60427bed1b868 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.7E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS18040 5b9f836dca7321a65cc60427bed1b868 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.7E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS18040 5b9f836dca7321a65cc60427bed1b868 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.7E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS18040 5b9f836dca7321a65cc60427bed1b868 309 PANTHER PTHR30126 1 308 1.4E-52 T 19-04-2016 ALIDE2_RS18040 5b9f836dca7321a65cc60427bed1b868 309 SUPERFAMILY SSF46785 6 85 4.17E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18040 5b9f836dca7321a65cc60427bed1b868 309 Gene3D G3DSA:1.10.10.10 2 83 1.0E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18040 5b9f836dca7321a65cc60427bed1b868 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.7E-21 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS18040 5b9f836dca7321a65cc60427bed1b868 309 Pfam PF03466 LysR substrate binding domain 90 292 1.7E-27 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS18040 5b9f836dca7321a65cc60427bed1b868 309 Gene3D G3DSA:3.40.190.10 91 190 1.8E-14 T 19-04-2016 ALIDE2_RS00350 2ee5a8e92be99b176dcad9309ace37d5 191 Gene3D G3DSA:1.20.1200.10 17 180 3.5E-61 T 19-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 ALIDE2_RS00350 2ee5a8e92be99b176dcad9309ace37d5 191 SUPERFAMILY SSF89028 7 178 1.0E-55 T 19-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 ALIDE2_RS00350 2ee5a8e92be99b176dcad9309ace37d5 191 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 178 4.8E-55 T 19-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 ALIDE2_RS00350 2ee5a8e92be99b176dcad9309ace37d5 191 PANTHER PTHR12213 4 191 4.5E-60 T 19-04-2016 ALIDE2_RS00350 2ee5a8e92be99b176dcad9309ace37d5 191 Pfam PF01923 Cobalamin adenosyltransferase 8 165 2.2E-53 T 19-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 ALIDE2_RS00350 2ee5a8e92be99b176dcad9309ace37d5 191 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 23 177 2.0E-47 T 19-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 ALIDE2_RS22995 1f4e76bda42b27db132383b4c2a0f279 558 SMART SM00382 271 415 1.2E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS22995 1f4e76bda42b27db132383b4c2a0f279 558 Gene3D G3DSA:3.30.450.20 114 207 9.2E-6 T 19-04-2016 ALIDE2_RS22995 1f4e76bda42b27db132383b4c2a0f279 558 Gene3D G3DSA:1.10.8.60 425 494 5.1E-20 T 19-04-2016 ALIDE2_RS22995 1f4e76bda42b27db132383b4c2a0f279 558 Pfam PF00158 Sigma-54 interaction domain 251 417 2.7E-60 T 19-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ALIDE2_RS22995 1f4e76bda42b27db132383b4c2a0f279 558 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 275 288 - T 19-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ALIDE2_RS22995 1f4e76bda42b27db132383b4c2a0f279 558 Gene3D G3DSA:1.10.10.60 517 553 4.8E-12 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS22995 1f4e76bda42b27db132383b4c2a0f279 558 SUPERFAMILY SSF52540 251 494 4.6E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22995 1f4e76bda42b27db132383b4c2a0f279 558 Gene3D G3DSA:3.40.50.300 249 424 2.7E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22995 1f4e76bda42b27db132383b4c2a0f279 558 PANTHER PTHR32071 215 553 8.0E-126 T 19-04-2016 ALIDE2_RS22995 1f4e76bda42b27db132383b4c2a0f279 558 SUPERFAMILY SSF46689 465 553 4.26E-8 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS22995 1f4e76bda42b27db132383b4c2a0f279 558 Pfam PF02954 Bacterial regulatory protein, Fis family 518 553 3.6E-10 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS22995 1f4e76bda42b27db132383b4c2a0f279 558 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 338 353 - T 19-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ALIDE2_RS22995 1f4e76bda42b27db132383b4c2a0f279 558 SUPERFAMILY SSF55785 116 207 4.99E-9 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 SUPERFAMILY SSF74778 1 160 1.15E-68 T 19-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 SUPERFAMILY SSF52016 162 372 3.66E-63 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 855 0.0 T 19-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 Gene3D G3DSA:3.30.499.10 687 859 2.7E-51 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 Gene3D G3DSA:3.30.499.10 405 522 8.0E-62 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 Pfam PF11791 Aconitate B N-terminal domain 4 156 6.9E-65 T 19-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 SUPERFAMILY SSF53732 380 856 3.27E-143 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 Gene3D G3DSA:3.40.1060.10 523 685 3.6E-84 T 19-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 ProSitePatterns PS00450 Aconitase family signature 1. 705 722 - T 19-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 PIRSF PIRSF036687 1 861 0.0 T 19-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 PANTHER PTHR11670 305 861 0.0 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.7E-93 T 19-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 Gene3D G3DSA:3.20.19.10 163 361 2.1E-86 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 PANTHER PTHR11670:SF39 305 861 0.0 T 19-04-2016 ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 ProSitePatterns PS01244 Aconitase family signature 2. 763 776 - T 19-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS11040 ea4e320f8838463d144c60450873562b 863 Pfam PF00330 Aconitase family (aconitate hydratase) 473 817 2.3E-39 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19490 467a2cf7cb921404aeca3f9c09e64673 330 SUPERFAMILY SSF53850 120 291 9.15E-14 T 19-04-2016 ALIDE2_RS19490 467a2cf7cb921404aeca3f9c09e64673 330 PANTHER PTHR30349:SF16 1 294 6.0E-118 T 19-04-2016 ALIDE2_RS19490 467a2cf7cb921404aeca3f9c09e64673 330 PANTHER PTHR30349 1 294 6.0E-118 T 19-04-2016 ALIDE2_RS19490 467a2cf7cb921404aeca3f9c09e64673 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 326 1.1E-99 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS19490 467a2cf7cb921404aeca3f9c09e64673 330 PIRSF PIRSF017082 1 330 1.0E-102 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS07735 bb6e47c27cac1e1fd8da451a812225b0 235 PANTHER PTHR24220:SF568 3 234 6.2E-103 T 19-04-2016 ALIDE2_RS07735 bb6e47c27cac1e1fd8da451a812225b0 235 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS07735 bb6e47c27cac1e1fd8da451a812225b0 235 PANTHER PTHR24220 3 234 6.2E-103 T 19-04-2016 ALIDE2_RS07735 bb6e47c27cac1e1fd8da451a812225b0 235 Pfam PF00005 ABC transporter 17 163 3.0E-27 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS07735 bb6e47c27cac1e1fd8da451a812225b0 235 Gene3D G3DSA:3.40.50.300 1 229 1.3E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07735 bb6e47c27cac1e1fd8da451a812225b0 235 SMART SM00382 26 214 6.7E-4 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS07735 bb6e47c27cac1e1fd8da451a812225b0 235 SUPERFAMILY SSF52540 2 232 3.36E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20885 3215fdddea4123ce44fa0103d3717662 489 PRINTS PR00207 Flagellin signature 37 54 2.2E-24 T 19-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ALIDE2_RS20885 3215fdddea4123ce44fa0103d3717662 489 PRINTS PR00207 Flagellin signature 76 95 2.2E-24 T 19-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ALIDE2_RS20885 3215fdddea4123ce44fa0103d3717662 489 PRINTS PR00207 Flagellin signature 111 134 2.2E-24 T 19-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ALIDE2_RS20885 3215fdddea4123ce44fa0103d3717662 489 PANTHER PTHR30244:SF1 2 184 1.1E-127 T 19-04-2016 ALIDE2_RS20885 3215fdddea4123ce44fa0103d3717662 489 PANTHER PTHR30244:SF1 327 489 1.1E-127 T 19-04-2016 ALIDE2_RS20885 3215fdddea4123ce44fa0103d3717662 489 SUPERFAMILY SSF64518 1 489 3.14E-104 T 19-04-2016 ALIDE2_RS20885 3215fdddea4123ce44fa0103d3717662 489 Pfam PF07196 Flagellin hook IN motif 197 240 2.1E-7 T 19-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 ALIDE2_RS20885 3215fdddea4123ce44fa0103d3717662 489 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.5E-44 T 19-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ALIDE2_RS20885 3215fdddea4123ce44fa0103d3717662 489 PANTHER PTHR30244 2 184 1.1E-127 T 19-04-2016 ALIDE2_RS20885 3215fdddea4123ce44fa0103d3717662 489 PANTHER PTHR30244 327 489 1.1E-127 T 19-04-2016 ALIDE2_RS20885 3215fdddea4123ce44fa0103d3717662 489 Pfam PF00700 Bacterial flagellin C-terminal helical region 404 488 1.1E-26 T 19-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ALIDE2_RS20885 3215fdddea4123ce44fa0103d3717662 489 Gene3D G3DSA:1.20.1330.10 54 171 2.4E-59 T 19-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ALIDE2_RS20885 3215fdddea4123ce44fa0103d3717662 489 Gene3D G3DSA:1.20.1330.10 391 445 2.4E-59 T 19-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ALIDE2_RS18735 b4ea78688f5fbd5010d1ce5abfe1d933 780 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 11 778 32.534 T 19-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS18735 b4ea78688f5fbd5010d1ce5abfe1d933 780 SUPERFAMILY SSF101904 531 767 6.15E-43 T 19-04-2016 ALIDE2_RS18735 b4ea78688f5fbd5010d1ce5abfe1d933 780 Gene3D G3DSA:2.120.10.90 527 730 6.5E-29 T 19-04-2016 ALIDE2_RS18735 b4ea78688f5fbd5010d1ce5abfe1d933 780 SMART SM00434 18 494 3.9E-209 T 19-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18735 b4ea78688f5fbd5010d1ce5abfe1d933 780 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 18 772 8.8E-226 T 19-04-2016 ALIDE2_RS18735 b4ea78688f5fbd5010d1ce5abfe1d933 780 Gene3D G3DSA:1.10.268.10 395 490 7.6E-29 T 19-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18735 b4ea78688f5fbd5010d1ce5abfe1d933 780 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 574 600 0.42 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS18735 b4ea78688f5fbd5010d1ce5abfe1d933 780 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 683 726 4.2E-6 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS18735 b4ea78688f5fbd5010d1ce5abfe1d933 780 PANTHER PTHR10169:SF30 302 549 4.6E-195 T 19-04-2016 ALIDE2_RS18735 b4ea78688f5fbd5010d1ce5abfe1d933 780 PANTHER PTHR10169:SF30 23 278 4.6E-195 T 19-04-2016 ALIDE2_RS18735 b4ea78688f5fbd5010d1ce5abfe1d933 780 Gene3D G3DSA:3.90.199.10 31 289 1.1E-96 T 19-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 ALIDE2_RS18735 b4ea78688f5fbd5010d1ce5abfe1d933 780 SUPERFAMILY SSF56719 38 516 1.7E-143 T 19-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 ALIDE2_RS18735 b4ea78688f5fbd5010d1ce5abfe1d933 780 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 39 499 2.6E-125 T 19-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18735 b4ea78688f5fbd5010d1ce5abfe1d933 780 PANTHER PTHR10169 302 549 4.6E-195 T 19-04-2016 ALIDE2_RS18735 b4ea78688f5fbd5010d1ce5abfe1d933 780 PANTHER PTHR10169 23 278 4.6E-195 T 19-04-2016 ALIDE2_RS21470 1212e53357b6e8762d0987dfb31629fc 240 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 52 8.0E-5 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS21470 1212e53357b6e8762d0987dfb31629fc 240 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 60 83 8.0E-5 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS21470 1212e53357b6e8762d0987dfb31629fc 240 PANTHER PTHR30055:SF73 21 201 3.0E-23 T 19-04-2016 ALIDE2_RS21470 1212e53357b6e8762d0987dfb31629fc 240 SUPERFAMILY SSF48498 111 234 2.4E-18 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS21470 1212e53357b6e8762d0987dfb31629fc 240 Pfam PF00440 Bacterial regulatory proteins, tetR family 40 84 6.5E-13 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS21470 1212e53357b6e8762d0987dfb31629fc 240 Gene3D G3DSA:1.10.357.10 25 232 6.2E-33 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS21470 1212e53357b6e8762d0987dfb31629fc 240 SUPERFAMILY SSF46689 28 104 2.62E-17 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS21470 1212e53357b6e8762d0987dfb31629fc 240 PANTHER PTHR30055 21 201 3.0E-23 T 19-04-2016 ALIDE2_RS00265 9de81e1a3661e5ba4905626242f58188 202 PANTHER PTHR11260 1 195 2.1E-85 T 19-04-2016 ALIDE2_RS00265 9de81e1a3661e5ba4905626242f58188 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 11 80 1.3E-8 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ALIDE2_RS00265 9de81e1a3661e5ba4905626242f58188 202 Gene3D G3DSA:1.20.1050.10 89 188 5.2E-42 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS00265 9de81e1a3661e5ba4905626242f58188 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 104 189 2.1E-14 T 19-04-2016 IPR004046 Glutathione S-transferase, C-terminal ALIDE2_RS00265 9de81e1a3661e5ba4905626242f58188 202 Gene3D G3DSA:3.40.30.10 1 88 9.4E-26 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS00265 9de81e1a3661e5ba4905626242f58188 202 SUPERFAMILY SSF47616 81 199 1.0E-30 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS00265 9de81e1a3661e5ba4905626242f58188 202 SUPERFAMILY SSF52833 1 79 6.41E-19 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS00265 9de81e1a3661e5ba4905626242f58188 202 PANTHER PTHR11260:SF154 1 195 2.1E-85 T 19-04-2016 ALIDE2_RS15525 c7df2afcce11ab60bd92b1c320629223 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 1.7E-61 T 19-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS15525 c7df2afcce11ab60bd92b1c320629223 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 5.7E-27 T 19-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS15525 c7df2afcce11ab60bd92b1c320629223 163 Pfam PF13710 ACT domain 13 73 2.7E-14 T 19-04-2016 ALIDE2_RS15525 c7df2afcce11ab60bd92b1c320629223 163 SUPERFAMILY SSF55021 1 76 8.18E-21 T 19-04-2016 ALIDE2_RS15525 c7df2afcce11ab60bd92b1c320629223 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 5.0E-36 T 19-04-2016 ALIDE2_RS15525 c7df2afcce11ab60bd92b1c320629223 163 Gene3D G3DSA:3.30.70.1150 83 161 7.3E-30 T 19-04-2016 ALIDE2_RS15525 c7df2afcce11ab60bd92b1c320629223 163 SUPERFAMILY SSF55021 79 162 6.41E-25 T 19-04-2016 ALIDE2_RS15525 c7df2afcce11ab60bd92b1c320629223 163 PANTHER PTHR30239 1 161 1.9E-79 T 19-04-2016 ALIDE2_RS15525 c7df2afcce11ab60bd92b1c320629223 163 Gene3D G3DSA:3.30.70.260 1 78 2.7E-35 T 19-04-2016 ALIDE2_RS18970 e8f12d63e5eacf0b28a9f72c701513d4 463 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 461 57.195 T 19-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 ALIDE2_RS18970 e8f12d63e5eacf0b28a9f72c701513d4 463 PANTHER PTHR23135:SF17 1 451 2.9E-220 T 19-04-2016 ALIDE2_RS18970 e8f12d63e5eacf0b28a9f72c701513d4 463 Pfam PF08245 Mur ligase middle domain 116 303 7.7E-22 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS18970 e8f12d63e5eacf0b28a9f72c701513d4 463 SUPERFAMILY SSF53623 104 320 1.96E-49 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS18970 e8f12d63e5eacf0b28a9f72c701513d4 463 Pfam PF02875 Mur ligase family, glutamate ligase domain 323 372 7.4E-9 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS18970 e8f12d63e5eacf0b28a9f72c701513d4 463 PANTHER PTHR23135 1 451 2.9E-220 T 19-04-2016 ALIDE2_RS18970 e8f12d63e5eacf0b28a9f72c701513d4 463 Gene3D G3DSA:3.90.190.20 325 461 1.1E-30 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS18970 e8f12d63e5eacf0b28a9f72c701513d4 463 Gene3D G3DSA:3.40.1190.10 100 324 2.2E-89 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS18970 e8f12d63e5eacf0b28a9f72c701513d4 463 SUPERFAMILY SSF53244 323 459 1.24E-33 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS18970 e8f12d63e5eacf0b28a9f72c701513d4 463 Gene3D G3DSA:3.40.50.720 1 98 2.7E-36 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS18970 e8f12d63e5eacf0b28a9f72c701513d4 463 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 460 3.7E-199 T 19-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 ALIDE2_RS18970 e8f12d63e5eacf0b28a9f72c701513d4 463 SUPERFAMILY SSF51984 1 74 2.22E-16 T 19-04-2016 ALIDE2_RS18970 e8f12d63e5eacf0b28a9f72c701513d4 463 Pfam PF01225 Mur ligase family, catalytic domain 2 106 6.9E-12 T 19-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS23280 a1beb6dda4cab18b01aeeb019859ded7 279 SMART SM00345 20 81 8.9E-15 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS23280 a1beb6dda4cab18b01aeeb019859ded7 279 SUPERFAMILY SSF48008 104 240 1.6E-22 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS23280 a1beb6dda4cab18b01aeeb019859ded7 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 5.6E-8 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS23280 a1beb6dda4cab18b01aeeb019859ded7 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 5.6E-8 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS23280 a1beb6dda4cab18b01aeeb019859ded7 279 Pfam PF07729 FCD domain 106 234 4.6E-19 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS23280 a1beb6dda4cab18b01aeeb019859ded7 279 Gene3D G3DSA:1.20.120.530 103 243 3.4E-23 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS23280 a1beb6dda4cab18b01aeeb019859ded7 279 SMART SM00895 106 235 1.0E-16 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS23280 a1beb6dda4cab18b01aeeb019859ded7 279 SUPERFAMILY SSF46785 13 74 9.78E-16 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23280 a1beb6dda4cab18b01aeeb019859ded7 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 74 1.0E-17 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS23280 a1beb6dda4cab18b01aeeb019859ded7 279 Gene3D G3DSA:1.10.10.10 9 74 5.6E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23280 a1beb6dda4cab18b01aeeb019859ded7 279 PANTHER PTHR11751 17 88 7.0E-20 T 19-04-2016 ALIDE2_RS23280 a1beb6dda4cab18b01aeeb019859ded7 279 PANTHER PTHR11751 104 122 7.0E-20 T 19-04-2016 ALIDE2_RS08350 f5c0d38e8d6a2581df56f312d356a48f 381 PANTHER PTHR10909 16 381 1.4E-163 T 19-04-2016 ALIDE2_RS08350 f5c0d38e8d6a2581df56f312d356a48f 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 121 2.0E-27 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS08350 f5c0d38e8d6a2581df56f312d356a48f 381 SUPERFAMILY SSF56645 7 245 1.57E-73 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS08350 f5c0d38e8d6a2581df56f312d356a48f 381 PANTHER PTHR10909:SF190 16 381 1.4E-163 T 19-04-2016 ALIDE2_RS08350 f5c0d38e8d6a2581df56f312d356a48f 381 Gene3D G3DSA:1.10.540.10 10 122 8.7E-32 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS08350 f5c0d38e8d6a2581df56f312d356a48f 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 220 9.7E-24 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS08350 f5c0d38e8d6a2581df56f312d356a48f 381 Gene3D G3DSA:2.40.110.10 124 219 1.4E-35 T 19-04-2016 ALIDE2_RS08350 f5c0d38e8d6a2581df56f312d356a48f 381 SUPERFAMILY SSF47203 231 381 4.51E-45 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS08350 f5c0d38e8d6a2581df56f312d356a48f 381 Gene3D G3DSA:1.20.140.10 220 381 4.3E-54 T 19-04-2016 ALIDE2_RS08350 f5c0d38e8d6a2581df56f312d356a48f 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 380 1.7E-41 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS07500 c43525b6cb5a9195e6cce2da9e2273a3 271 PANTHER PTHR11941 2 268 1.8E-77 T 19-04-2016 ALIDE2_RS07500 c43525b6cb5a9195e6cce2da9e2273a3 271 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 270 3.0E-42 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS07500 c43525b6cb5a9195e6cce2da9e2273a3 271 Gene3D G3DSA:3.90.226.10 13 268 1.2E-67 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS07500 c43525b6cb5a9195e6cce2da9e2273a3 271 SUPERFAMILY SSF52096 12 271 3.78E-72 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS06705 119fa92dc9c7f785f5471411c633959a 304 PANTHER PTHR30537:SF5 9 298 7.8E-111 T 19-04-2016 ALIDE2_RS06705 119fa92dc9c7f785f5471411c633959a 304 SUPERFAMILY SSF46785 11 115 5.06E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06705 119fa92dc9c7f785f5471411c633959a 304 Gene3D G3DSA:3.40.190.10 96 180 3.7E-25 T 19-04-2016 ALIDE2_RS06705 119fa92dc9c7f785f5471411c633959a 304 Gene3D G3DSA:1.10.10.10 11 91 4.4E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06705 119fa92dc9c7f785f5471411c633959a 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 2.5E-15 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06705 119fa92dc9c7f785f5471411c633959a 304 SUPERFAMILY SSF53850 94 300 1.65E-46 T 19-04-2016 ALIDE2_RS06705 119fa92dc9c7f785f5471411c633959a 304 Pfam PF03466 LysR substrate binding domain 93 297 1.8E-45 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS06705 119fa92dc9c7f785f5471411c633959a 304 Gene3D G3DSA:3.40.190.10 181 265 4.2E-24 T 19-04-2016 ALIDE2_RS06705 119fa92dc9c7f785f5471411c633959a 304 PANTHER PTHR30537 9 298 7.8E-111 T 19-04-2016 ALIDE2_RS13055 9374b451fae8b54658f85b892fe0423c 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 83 101 2.2E-30 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS13055 9374b451fae8b54658f85b892fe0423c 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 140 157 2.2E-30 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS13055 9374b451fae8b54658f85b892fe0423c 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 115 131 2.2E-30 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS13055 9374b451fae8b54658f85b892fe0423c 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 47 68 2.2E-30 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS13055 9374b451fae8b54658f85b892fe0423c 302 PIRSF PIRSF001365 12 302 1.4E-87 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS13055 9374b451fae8b54658f85b892fe0423c 302 PANTHER PTHR12128:SF34 1 298 3.4E-118 T 19-04-2016 ALIDE2_RS13055 9374b451fae8b54658f85b892fe0423c 302 SMART SM01130 13 301 1.4E-131 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS13055 9374b451fae8b54658f85b892fe0423c 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 145 175 - T 19-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS13055 9374b451fae8b54658f85b892fe0423c 302 Gene3D G3DSA:3.20.20.70 15 300 8.9E-111 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS13055 9374b451fae8b54658f85b892fe0423c 302 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 13 299 60.54 T 19-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS13055 9374b451fae8b54658f85b892fe0423c 302 Pfam PF00701 Dihydrodipicolinate synthetase family 15 298 1.3E-85 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS13055 9374b451fae8b54658f85b892fe0423c 302 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 17 298 1.5E-93 T 19-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS13055 9374b451fae8b54658f85b892fe0423c 302 SUPERFAMILY SSF51569 13 300 1.15E-99 T 19-04-2016 ALIDE2_RS13055 9374b451fae8b54658f85b892fe0423c 302 PANTHER PTHR12128 1 298 3.4E-118 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 Gene3D G3DSA:3.30.365.10 637 787 8.2E-68 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 Gene3D G3DSA:3.30.365.10 377 466 8.2E-68 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 Gene3D G3DSA:3.90.1170.50 9 133 1.1E-46 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 Gene3D G3DSA:3.30.365.10 134 189 2.1E-48 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 Gene3D G3DSA:3.30.365.10 298 374 2.1E-48 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 PANTHER PTHR11908:SF85 605 790 0.0 T 19-04-2016 ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 PANTHER PTHR11908:SF85 12 588 0.0 T 19-04-2016 ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 PANTHER PTHR11908 605 790 0.0 T 19-04-2016 ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 PANTHER PTHR11908 12 588 0.0 T 19-04-2016 ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 SMART SM01008 26 145 7.6E-58 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 SUPERFAMILY SSF56003 137 786 5.36E-198 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 26 144 4.2E-31 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 SUPERFAMILY SSF54665 6 159 9.16E-48 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 Gene3D G3DSA:3.30.365.10 190 296 5.8E-34 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 159 723 8.5E-170 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS11080 c622dc1678b4b7b69c876d90a44074b1 790 Gene3D G3DSA:3.30.365.10 467 636 4.5E-49 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS16335 ce4f0cca5cb2418b8aacc06981f0dad2 147 TIGRFAM TIGR03738 PRTRC_C: PRTRC system protein C 5 68 1.3E-28 T 19-04-2016 IPR022289 ParB-related, ThiF-related cassette, protein C ALIDE2_RS16335 ce4f0cca5cb2418b8aacc06981f0dad2 147 Pfam PF14454 Prokaryotic Ubiquitin 4 66 3.9E-21 T 19-04-2016 IPR032866 Prokaryotic Ubiquitin ALIDE2_RS11560 907dd1923077e965dc920c3cf9e68e5a 442 SUPERFAMILY SSF47090 373 440 2.51E-17 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS11560 907dd1923077e965dc920c3cf9e68e5a 442 PANTHER PTHR30163 4 442 2.8E-151 T 19-04-2016 IPR011757 Lytic transglycosylase MltB ALIDE2_RS11560 907dd1923077e965dc920c3cf9e68e5a 442 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 73 367 5.7E-110 T 19-04-2016 IPR011970 Lytic murein transglycosylase ALIDE2_RS11560 907dd1923077e965dc920c3cf9e68e5a 442 Gene3D G3DSA:1.10.101.10 382 441 7.4E-16 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS11560 907dd1923077e965dc920c3cf9e68e5a 442 Gene3D G3DSA:1.10.530.10 254 368 9.4E-56 T 19-04-2016 ALIDE2_RS11560 907dd1923077e965dc920c3cf9e68e5a 442 Gene3D G3DSA:1.10.530.10 116 160 9.4E-56 T 19-04-2016 ALIDE2_RS11560 907dd1923077e965dc920c3cf9e68e5a 442 Pfam PF13406 Transglycosylase SLT domain 73 363 7.8E-109 T 19-04-2016 IPR031304 Transglycosylase SLT domain 2 ALIDE2_RS11560 907dd1923077e965dc920c3cf9e68e5a 442 Pfam PF01471 Putative peptidoglycan binding domain 384 439 2.6E-14 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS11560 907dd1923077e965dc920c3cf9e68e5a 442 SUPERFAMILY SSF53955 66 368 5.62E-98 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS11560 907dd1923077e965dc920c3cf9e68e5a 442 Gene3D G3DSA:1.10.530.10 161 175 1.4E-4 T 19-04-2016 ALIDE2_RS11560 907dd1923077e965dc920c3cf9e68e5a 442 Gene3D G3DSA:1.10.530.10 220 243 1.4E-4 T 19-04-2016 ALIDE2_RS11560 907dd1923077e965dc920c3cf9e68e5a 442 PANTHER PTHR30163:SF2 4 442 2.8E-151 T 19-04-2016 ALIDE2_RS22910 11f4d71b74a977f5e9b9f986744b8ee7 298 PANTHER PTHR30126 1 295 3.8E-60 T 19-04-2016 ALIDE2_RS22910 11f4d71b74a977f5e9b9f986744b8ee7 298 Gene3D G3DSA:1.10.10.10 1 83 6.6E-30 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22910 11f4d71b74a977f5e9b9f986744b8ee7 298 SUPERFAMILY SSF53850 91 297 1.99E-22 T 19-04-2016 ALIDE2_RS22910 11f4d71b74a977f5e9b9f986744b8ee7 298 PANTHER PTHR30126:SF2 1 295 3.8E-60 T 19-04-2016 ALIDE2_RS22910 11f4d71b74a977f5e9b9f986744b8ee7 298 Pfam PF03466 LysR substrate binding domain 88 296 1.4E-21 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS22910 11f4d71b74a977f5e9b9f986744b8ee7 298 Gene3D G3DSA:3.40.190.10 84 202 3.4E-10 T 19-04-2016 ALIDE2_RS22910 11f4d71b74a977f5e9b9f986744b8ee7 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 5.9E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22910 11f4d71b74a977f5e9b9f986744b8ee7 298 SUPERFAMILY SSF46785 1 112 8.16E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22910 11f4d71b74a977f5e9b9f986744b8ee7 298 Gene3D G3DSA:3.40.190.10 203 261 5.1E-7 T 19-04-2016 ALIDE2_RS02045 bbb39ddfb208220a0993b7b950f2ec6d 126 Gene3D G3DSA:3.30.1390.10 54 126 1.4E-31 T 19-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ALIDE2_RS02045 bbb39ddfb208220a0993b7b950f2ec6d 126 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 9.1E-16 T 19-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS02045 bbb39ddfb208220a0993b7b950f2ec6d 126 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 126 1.1E-46 T 19-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS02045 bbb39ddfb208220a0993b7b950f2ec6d 126 Gene3D G3DSA:1.20.5.710 2 52 5.8E-22 T 19-04-2016 ALIDE2_RS02045 bbb39ddfb208220a0993b7b950f2ec6d 126 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 126 24.327 T 19-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS02045 bbb39ddfb208220a0993b7b950f2ec6d 126 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 60 126 1.9E-28 T 19-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 ALIDE2_RS02045 bbb39ddfb208220a0993b7b950f2ec6d 126 SUPERFAMILY SSF48300 4 62 9.68E-16 T 19-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS02045 bbb39ddfb208220a0993b7b950f2ec6d 126 SUPERFAMILY SSF54736 55 126 5.23E-23 T 19-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ALIDE2_RS02045 bbb39ddfb208220a0993b7b950f2ec6d 126 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 62 126 5.0E-23 T 19-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 ALIDE2_RS20130 6e6e66433705a98b9c58dcce0a968404 593 PANTHER PTHR23135:SF2 86 583 3.0E-122 T 19-04-2016 ALIDE2_RS20130 6e6e66433705a98b9c58dcce0a968404 593 PANTHER PTHR23135 86 583 3.0E-122 T 19-04-2016 ALIDE2_RS20130 6e6e66433705a98b9c58dcce0a968404 593 Gene3D G3DSA:3.40.1190.10 203 439 2.0E-66 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20130 6e6e66433705a98b9c58dcce0a968404 593 Gene3D G3DSA:3.90.190.20 441 577 1.4E-45 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS20130 6e6e66433705a98b9c58dcce0a968404 593 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 95 578 9.0E-104 T 19-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS20130 6e6e66433705a98b9c58dcce0a968404 593 SUPERFAMILY SSF53623 380 437 1.98E-46 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20130 6e6e66433705a98b9c58dcce0a968404 593 SUPERFAMILY SSF53623 208 347 1.98E-46 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20130 6e6e66433705a98b9c58dcce0a968404 593 Pfam PF02875 Mur ligase family, glutamate ligase domain 441 510 1.5E-6 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS20130 6e6e66433705a98b9c58dcce0a968404 593 Pfam PF08245 Mur ligase middle domain 213 420 6.8E-29 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20130 6e6e66433705a98b9c58dcce0a968404 593 SUPERFAMILY SSF53244 439 580 2.75E-40 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS20130 6e6e66433705a98b9c58dcce0a968404 593 SUPERFAMILY SSF51984 91 170 1.49E-13 T 19-04-2016 ALIDE2_RS20130 6e6e66433705a98b9c58dcce0a968404 593 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 94 580 31.631 T 19-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS20130 6e6e66433705a98b9c58dcce0a968404 593 Gene3D G3DSA:3.40.50.720 91 186 2.3E-18 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS02550 a461680ff5d381af9c98cfc69600ef8b 347 Hamap MF_01497 Stress response kinase A [srkA]. 10 341 46.961 T 19-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 ALIDE2_RS02550 a461680ff5d381af9c98cfc69600ef8b 347 PANTHER PTHR39573 8 345 3.1E-144 T 19-04-2016 ALIDE2_RS02550 a461680ff5d381af9c98cfc69600ef8b 347 Pfam PF01636 Phosphotransferase enzyme family 41 284 1.1E-39 T 19-04-2016 IPR002575 Aminoglycoside phosphotransferase ALIDE2_RS02550 a461680ff5d381af9c98cfc69600ef8b 347 PANTHER PTHR39573:SF1 8 345 3.1E-144 T 19-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 ALIDE2_RS02550 a461680ff5d381af9c98cfc69600ef8b 347 Gene3D G3DSA:3.90.1200.10 113 345 2.3E-58 T 19-04-2016 ALIDE2_RS02550 a461680ff5d381af9c98cfc69600ef8b 347 SUPERFAMILY SSF56112 12 345 8.75E-90 T 19-04-2016 IPR011009 Protein kinase-like domain ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 Pfam PF13844 Glycosyl transferase family 41 527 719 5.8E-52 T 19-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 Pfam PF13844 Glycosyl transferase family 41 366 519 9.5E-38 T 19-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 SUPERFAMILY SSF48452 43 255 3.79E-39 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 Gene3D G3DSA:1.25.40.10 36 290 8.3E-66 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 SMART SM00028 148 181 0.11 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 SMART SM00028 80 113 5.6E-5 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 SMART SM00028 216 249 7.9E-5 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 SMART SM00028 250 283 20.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 SMART SM00028 46 79 0.003 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 SMART SM00028 182 215 9.3E-5 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 SMART SM00028 114 147 0.07 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 Pfam PF13432 Tetratricopeptide repeat 187 249 3.2E-8 T 19-04-2016 ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 Pfam PF13432 Tetratricopeptide repeat 118 176 0.016 T 19-04-2016 ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 Pfam PF13414 TPR repeat 53 94 9.4E-8 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 SUPERFAMILY SSF53756 485 716 4.55E-5 T 19-04-2016 ALIDE2_RS02385 a66674c823844493a42ecde48a84b556 734 PANTHER PTHR23083 43 287 5.1E-52 T 19-04-2016 ALIDE2_RS23510 72206a45feae8841d3631c695cad621d 310 PANTHER PTHR30514 17 284 1.8E-38 T 19-04-2016 ALIDE2_RS23510 72206a45feae8841d3631c695cad621d 310 SUPERFAMILY SSF46689 13 84 5.2E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS23510 72206a45feae8841d3631c695cad621d 310 Gene3D G3DSA:1.10.10.10 13 85 2.6E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23510 72206a45feae8841d3631c695cad621d 310 PANTHER PTHR30514:SF3 17 284 1.8E-38 T 19-04-2016 ALIDE2_RS23510 72206a45feae8841d3631c695cad621d 310 SUPERFAMILY SSF53697 109 279 1.11E-25 T 19-04-2016 ALIDE2_RS23510 72206a45feae8841d3631c695cad621d 310 Gene3D G3DSA:3.40.50.10490 113 278 8.2E-23 T 19-04-2016 ALIDE2_RS23510 72206a45feae8841d3631c695cad621d 310 Pfam PF01380 SIS domain 140 266 1.8E-17 T 19-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 ALIDE2_RS23510 72206a45feae8841d3631c695cad621d 310 Pfam PF01418 Helix-turn-helix domain, rpiR family 16 83 3.3E-14 T 19-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 ALIDE2_RS14420 dc05266adcc00ec39795b0411b6c9747 328 PANTHER PTHR33376:SF2 2 311 1.1E-86 T 19-04-2016 ALIDE2_RS14420 dc05266adcc00ec39795b0411b6c9747 328 PANTHER PTHR33376 2 311 1.1E-86 T 19-04-2016 ALIDE2_RS14420 dc05266adcc00ec39795b0411b6c9747 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 311 2.6E-53 T 19-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 ALIDE2_RS21495 07e52c689b0461e23a598581676a5b53 395 Pfam PF02803 Thiolase, C-terminal domain 271 392 2.2E-42 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS21495 07e52c689b0461e23a598581676a5b53 395 PANTHER PTHR18919:SF14 1 395 8.0E-196 T 19-04-2016 ALIDE2_RS21495 07e52c689b0461e23a598581676a5b53 395 SUPERFAMILY SSF53901 272 393 1.05E-40 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS21495 07e52c689b0461e23a598581676a5b53 395 PANTHER PTHR18919 1 395 8.0E-196 T 19-04-2016 ALIDE2_RS21495 07e52c689b0461e23a598581676a5b53 395 SUPERFAMILY SSF53901 1 267 7.62E-66 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS21495 07e52c689b0461e23a598581676a5b53 395 PIRSF PIRSF000429 1 394 2.7E-115 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS21495 07e52c689b0461e23a598581676a5b53 395 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 19-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 ALIDE2_RS21495 07e52c689b0461e23a598581676a5b53 395 Gene3D G3DSA:3.40.47.10 187 275 3.3E-59 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS21495 07e52c689b0461e23a598581676a5b53 395 Gene3D G3DSA:3.40.47.10 4 125 3.3E-59 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS21495 07e52c689b0461e23a598581676a5b53 395 Pfam PF00108 Thiolase, N-terminal domain 5 262 1.1E-64 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS21495 07e52c689b0461e23a598581676a5b53 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 392 1.9E-123 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS21495 07e52c689b0461e23a598581676a5b53 395 Gene3D G3DSA:3.40.47.10 146 186 5.5E-59 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS21495 07e52c689b0461e23a598581676a5b53 395 Gene3D G3DSA:3.40.47.10 278 393 5.5E-59 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS11835 b102d2dd994e0ef6c88ec17a4e321f1c 256 Gene3D G3DSA:3.40.50.720 2 245 1.3E-40 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11835 b102d2dd994e0ef6c88ec17a4e321f1c 256 PANTHER PTHR24322 160 193 1.6E-15 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11835 b102d2dd994e0ef6c88ec17a4e321f1c 256 PANTHER PTHR24322 8 140 1.6E-15 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11835 b102d2dd994e0ef6c88ec17a4e321f1c 256 Pfam PF00106 short chain dehydrogenase 7 204 2.0E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11835 b102d2dd994e0ef6c88ec17a4e321f1c 256 PANTHER PTHR24322:SF551 160 193 1.6E-15 T 19-04-2016 ALIDE2_RS11835 b102d2dd994e0ef6c88ec17a4e321f1c 256 PANTHER PTHR24322:SF551 8 140 1.6E-15 T 19-04-2016 ALIDE2_RS11835 b102d2dd994e0ef6c88ec17a4e321f1c 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS11835 b102d2dd994e0ef6c88ec17a4e321f1c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.2E-16 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11835 b102d2dd994e0ef6c88ec17a4e321f1c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.2E-16 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11835 b102d2dd994e0ef6c88ec17a4e321f1c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.2E-16 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11835 b102d2dd994e0ef6c88ec17a4e321f1c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.2E-16 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11835 b102d2dd994e0ef6c88ec17a4e321f1c 256 SUPERFAMILY SSF51735 1 244 3.24E-35 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11835 b102d2dd994e0ef6c88ec17a4e321f1c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 3.5E-5 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11835 b102d2dd994e0ef6c88ec17a4e321f1c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.5E-5 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11835 b102d2dd994e0ef6c88ec17a4e321f1c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 3.5E-5 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS02890 3c57d3d70202304c83441d1c4b8d38ab 762 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 171 1.1E-15 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS02890 3c57d3d70202304c83441d1c4b8d38ab 762 Gene3D G3DSA:2.170.130.10 58 178 1.5E-29 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS02890 3c57d3d70202304c83441d1c4b8d38ab 762 Pfam PF00593 TonB dependent receptor 503 760 2.5E-29 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS02890 3c57d3d70202304c83441d1c4b8d38ab 762 Gene3D G3DSA:2.40.170.20 186 760 2.1E-107 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS02890 3c57d3d70202304c83441d1c4b8d38ab 762 SUPERFAMILY SSF56935 30 761 4.27E-117 T 19-04-2016 ALIDE2_RS02890 3c57d3d70202304c83441d1c4b8d38ab 762 PANTHER PTHR32552 434 762 1.3E-122 T 19-04-2016 ALIDE2_RS02890 3c57d3d70202304c83441d1c4b8d38ab 762 PANTHER PTHR32552 64 416 1.3E-122 T 19-04-2016 ALIDE2_RS02890 3c57d3d70202304c83441d1c4b8d38ab 762 PANTHER PTHR32552 4 41 1.3E-122 T 19-04-2016 ALIDE2_RS02890 3c57d3d70202304c83441d1c4b8d38ab 762 PANTHER PTHR32552:SF8 434 762 1.3E-122 T 19-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 ALIDE2_RS02890 3c57d3d70202304c83441d1c4b8d38ab 762 PANTHER PTHR32552:SF8 64 416 1.3E-122 T 19-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 ALIDE2_RS02890 3c57d3d70202304c83441d1c4b8d38ab 762 PANTHER PTHR32552:SF8 4 41 1.3E-122 T 19-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 ALIDE2_RS20260 8b24706368fd59c1cf8dcf4ac473ee5f 292 PANTHER PTHR31689 1 292 2.8E-121 T 19-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS20260 8b24706368fd59c1cf8dcf4ac473ee5f 292 Pfam PF01678 Diaminopimelate epimerase 5 124 1.5E-31 T 19-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS20260 8b24706368fd59c1cf8dcf4ac473ee5f 292 Pfam PF01678 Diaminopimelate epimerase 165 280 2.2E-27 T 19-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS20260 8b24706368fd59c1cf8dcf4ac473ee5f 292 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 3 286 4.3E-84 T 19-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS20260 8b24706368fd59c1cf8dcf4ac473ee5f 292 Gene3D G3DSA:3.10.310.10 121 276 1.2E-47 T 19-04-2016 ALIDE2_RS20260 8b24706368fd59c1cf8dcf4ac473ee5f 292 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 288 37.572 T 19-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS20260 8b24706368fd59c1cf8dcf4ac473ee5f 292 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 19-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS20260 8b24706368fd59c1cf8dcf4ac473ee5f 292 SUPERFAMILY SSF54506 3 289 2.09E-48 T 19-04-2016 ALIDE2_RS20260 8b24706368fd59c1cf8dcf4ac473ee5f 292 Gene3D G3DSA:3.10.310.10 1 120 2.0E-55 T 19-04-2016 ALIDE2_RS20260 8b24706368fd59c1cf8dcf4ac473ee5f 292 PANTHER PTHR31689:SF0 1 292 2.8E-121 T 19-04-2016 ALIDE2_RS06710 9b9be050d550bcefd7d61b4d79e3db51 355 Gene3D G3DSA:3.40.718.10 2 354 6.3E-116 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS06710 9b9be050d550bcefd7d61b4d79e3db51 355 PANTHER PTHR11835:SF33 3 354 4.8E-200 T 19-04-2016 ALIDE2_RS06710 9b9be050d550bcefd7d61b4d79e3db51 355 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 3 354 2.2E-164 T 19-04-2016 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 ALIDE2_RS06710 9b9be050d550bcefd7d61b4d79e3db51 355 SUPERFAMILY SSF53659 2 354 1.86E-110 T 19-04-2016 ALIDE2_RS06710 9b9be050d550bcefd7d61b4d79e3db51 355 PANTHER PTHR11835 3 354 4.8E-200 T 19-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 ALIDE2_RS06710 9b9be050d550bcefd7d61b4d79e3db51 355 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 350 6.1E-84 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS06710 9b9be050d550bcefd7d61b4d79e3db51 355 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 243 262 - T 19-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 ALIDE2_RS06710 9b9be050d550bcefd7d61b4d79e3db51 355 SMART SM01329 6 350 3.3E-162 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS11200 24a0f177ae476a1f93c1866b2101f4e4 329 SUPERFAMILY SSF81464 31 118 1.55E-22 T 19-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 ALIDE2_RS11200 24a0f177ae476a1f93c1866b2101f4e4 329 Gene3D G3DSA:2.60.40.420 133 288 2.3E-38 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS11200 24a0f177ae476a1f93c1866b2101f4e4 329 PIRSF PIRSF000292 2 320 3.2E-124 T 19-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 ALIDE2_RS11200 24a0f177ae476a1f93c1866b2101f4e4 329 PANTHER PTHR22888 1 276 6.8E-124 T 19-04-2016 ALIDE2_RS11200 24a0f177ae476a1f93c1866b2101f4e4 329 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 14 248 1.0E-100 T 19-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 ALIDE2_RS11200 24a0f177ae476a1f93c1866b2101f4e4 329 PANTHER PTHR22888:SF13 1 276 6.8E-124 T 19-04-2016 ALIDE2_RS11200 24a0f177ae476a1f93c1866b2101f4e4 329 SUPERFAMILY SSF49503 133 290 1.72E-47 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS11200 24a0f177ae476a1f93c1866b2101f4e4 329 Gene3D G3DSA:1.10.287.90 29 114 1.5E-33 T 19-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 ALIDE2_RS11200 24a0f177ae476a1f93c1866b2101f4e4 329 Pfam PF06481 COX Aromatic Rich Motif 248 293 2.8E-19 T 19-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 ALIDE2_RS11200 24a0f177ae476a1f93c1866b2101f4e4 329 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 159 229 6.2E-7 T 19-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 ALIDE2_RS05665 70bbb949f9fe3a61b15e2bd05cbc8373 450 Gene3D G3DSA:3.40.50.300 7 183 3.8E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05665 70bbb949f9fe3a61b15e2bd05cbc8373 450 SUPERFAMILY SSF52317 252 444 1.9E-30 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS05665 70bbb949f9fe3a61b15e2bd05cbc8373 450 Gene3D G3DSA:3.40.50.880 253 435 5.7E-24 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS05665 70bbb949f9fe3a61b15e2bd05cbc8373 450 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 11 163 7.9E-18 T 19-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE2_RS05665 70bbb949f9fe3a61b15e2bd05cbc8373 450 SUPERFAMILY SSF52540 9 180 8.52E-37 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05665 70bbb949f9fe3a61b15e2bd05cbc8373 450 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 437 5.8E-30 T 19-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 ALIDE2_RS05665 70bbb949f9fe3a61b15e2bd05cbc8373 450 PANTHER PTHR21343:SF6 2 438 2.1E-116 T 19-04-2016 ALIDE2_RS05665 70bbb949f9fe3a61b15e2bd05cbc8373 450 PANTHER PTHR21343 2 438 2.1E-116 T 19-04-2016 ALIDE2_RS20840 c706bbdbc05f38e160d3b97c369f7455 467 PANTHER PTHR15184:SF9 115 465 2.6E-216 T 19-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS20840 c706bbdbc05f38e160d3b97c369f7455 467 PANTHER PTHR15184:SF9 6 94 2.6E-216 T 19-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS20840 c706bbdbc05f38e160d3b97c369f7455 467 Gene3D G3DSA:3.40.50.300 149 422 9.4E-92 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20840 c706bbdbc05f38e160d3b97c369f7455 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 173 384 1.1E-71 T 19-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS20840 c706bbdbc05f38e160d3b97c369f7455 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 375 384 - T 19-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS20840 c706bbdbc05f38e160d3b97c369f7455 467 PANTHER PTHR15184 115 465 2.6E-216 T 19-04-2016 ALIDE2_RS20840 c706bbdbc05f38e160d3b97c369f7455 467 PANTHER PTHR15184 6 94 2.6E-216 T 19-04-2016 ALIDE2_RS20840 c706bbdbc05f38e160d3b97c369f7455 467 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 14 463 1.1E-170 T 19-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS20840 c706bbdbc05f38e160d3b97c369f7455 467 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 30 462 4.5E-193 T 19-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS20840 c706bbdbc05f38e160d3b97c369f7455 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 34 93 2.8E-4 T 19-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS20840 c706bbdbc05f38e160d3b97c369f7455 467 SMART SM00382 185 368 6.9E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS20840 c706bbdbc05f38e160d3b97c369f7455 467 SUPERFAMILY SSF52540 120 390 2.75E-94 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12730 9cb726fe3548be1cab8b8a52c6ac1196 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 1.2E-34 T 19-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal ALIDE2_RS12730 9cb726fe3548be1cab8b8a52c6ac1196 310 SMART SM00893 3 182 4.7E-55 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS12730 9cb726fe3548be1cab8b8a52c6ac1196 310 PANTHER PTHR10909 104 307 1.5E-118 T 19-04-2016 ALIDE2_RS12730 9cb726fe3548be1cab8b8a52c6ac1196 310 PANTHER PTHR10909:SF294 104 307 1.5E-118 T 19-04-2016 ALIDE2_RS12730 9cb726fe3548be1cab8b8a52c6ac1196 310 Gene3D G3DSA:3.40.50.620 1 181 2.1E-61 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS12730 9cb726fe3548be1cab8b8a52c6ac1196 310 PIRSF PIRSF000089 1 310 4.0E-104 T 19-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 ALIDE2_RS12730 9cb726fe3548be1cab8b8a52c6ac1196 310 SUPERFAMILY SSF52402 3 186 2.02E-54 T 19-04-2016 ALIDE2_RS12730 9cb726fe3548be1cab8b8a52c6ac1196 310 Gene3D G3DSA:3.40.50.1220 185 310 2.4E-59 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS12730 9cb726fe3548be1cab8b8a52c6ac1196 310 SUPERFAMILY SSF52467 189 310 1.2E-44 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS12730 9cb726fe3548be1cab8b8a52c6ac1196 310 Pfam PF01012 Electron transfer flavoprotein domain 4 169 2.2E-35 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS12730 9cb726fe3548be1cab8b8a52c6ac1196 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 19-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 Gene3D G3DSA:3.40.50.300 801 963 2.2E-36 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 SUPERFAMILY SSF52540 351 464 5.13E-24 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 SUPERFAMILY SSF52540 790 997 3.22E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 Pfam PF00270 DEAD/DEAH box helicase 612 769 2.9E-17 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 SMART SM00490 833 917 1.8E-16 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 Pfam PF03461 TRCF domain 1016 1108 2.7E-24 T 19-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 SUPERFAMILY SSF52540 530 790 6.59E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 SMART SM01058 479 583 3.5E-46 T 19-04-2016 IPR003711 CarD-like/TRCF domain ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 26 1134 27.722 T 19-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 Pfam PF00271 Helicase conserved C-terminal domain 813 916 9.9E-18 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 Gene3D G3DSA:3.40.50.300 596 793 3.1E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 SMART SM00982 1015 1115 4.1E-45 T 19-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 SUPERFAMILY SSF143517 1001 1151 3.53E-38 T 19-04-2016 ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 PANTHER PTHR14025 382 1148 0.0 T 19-04-2016 ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 SUPERFAMILY SSF141259 471 555 5.36E-21 T 19-04-2016 IPR003711 CarD-like/TRCF domain ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 Pfam PF02559 CarD-like/TRCF domain 480 582 8.8E-27 T 19-04-2016 IPR003711 CarD-like/TRCF domain ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 Gene3D G3DSA:3.30.2060.10 132 206 4.3E-13 T 19-04-2016 ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 SMART SM00487 607 797 2.8E-28 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 PANTHER PTHR14025:SF21 382 1148 0.0 T 19-04-2016 ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 150 1088 0.0 T 19-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 ALIDE2_RS17970 c37bb3c02343e2347224768b390dcd00 1163 SUPERFAMILY SSF52540 7 339 2.79E-94 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17400 937051180ee8c16d5a452f451029569e 288 Pfam PF04794 YdjC-like protein 14 269 3.6E-47 T 19-04-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like ALIDE2_RS17400 937051180ee8c16d5a452f451029569e 288 PANTHER PTHR31609 7 275 1.3E-26 T 19-04-2016 ALIDE2_RS17400 937051180ee8c16d5a452f451029569e 288 SUPERFAMILY SSF88713 12 276 5.63E-50 T 19-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ALIDE2_RS17400 937051180ee8c16d5a452f451029569e 288 Gene3D G3DSA:3.20.20.370 12 275 1.3E-52 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ALIDE2_RS06635 0ea4cb3f9c5c401b74b638301b691be6 162 SUPERFAMILY SSF52833 3 154 2.6E-46 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS06635 0ea4cb3f9c5c401b74b638301b691be6 162 PANTHER PTHR10681 1 152 1.6E-39 T 19-04-2016 ALIDE2_RS06635 0ea4cb3f9c5c401b74b638301b691be6 162 Gene3D G3DSA:3.40.30.10 3 154 1.8E-43 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS06635 0ea4cb3f9c5c401b74b638301b691be6 162 Pfam PF00578 AhpC/TSA family 5 132 1.3E-31 T 19-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS06635 0ea4cb3f9c5c401b74b638301b691be6 162 PIRSF PIRSF000239 1 162 5.9E-30 T 19-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 ALIDE2_RS18580 f79b3690d168a9375ec50627566dad61 348 PANTHER PTHR22550 220 342 3.7E-19 T 19-04-2016 ALIDE2_RS18580 f79b3690d168a9375ec50627566dad61 348 PANTHER PTHR22550 1 181 3.7E-19 T 19-04-2016 ALIDE2_RS18580 f79b3690d168a9375ec50627566dad61 348 SUPERFAMILY SSF53300 87 179 2.53E-30 T 19-04-2016 IPR002035 von Willebrand factor, type A ALIDE2_RS18580 f79b3690d168a9375ec50627566dad61 348 SUPERFAMILY SSF53300 215 311 2.53E-30 T 19-04-2016 IPR002035 von Willebrand factor, type A ALIDE2_RS18580 f79b3690d168a9375ec50627566dad61 348 PANTHER PTHR22550:SF8 220 342 3.7E-19 T 19-04-2016 ALIDE2_RS18580 f79b3690d168a9375ec50627566dad61 348 PANTHER PTHR22550:SF8 1 181 3.7E-19 T 19-04-2016 ALIDE2_RS18580 f79b3690d168a9375ec50627566dad61 348 Gene3D G3DSA:3.40.50.410 88 181 1.1E-20 T 19-04-2016 IPR002035 von Willebrand factor, type A ALIDE2_RS18580 f79b3690d168a9375ec50627566dad61 348 Gene3D G3DSA:3.40.50.410 217 313 1.1E-20 T 19-04-2016 IPR002035 von Willebrand factor, type A ALIDE2_RS18580 f79b3690d168a9375ec50627566dad61 348 Pfam PF13519 von Willebrand factor type A domain 88 176 1.3E-17 T 19-04-2016 IPR002035 von Willebrand factor, type A ALIDE2_RS18580 f79b3690d168a9375ec50627566dad61 348 Pfam PF00092 von Willebrand factor type A domain 223 306 4.1E-7 T 19-04-2016 IPR002035 von Willebrand factor, type A ALIDE2_RS18580 f79b3690d168a9375ec50627566dad61 348 SMART SM00327 85 313 1.7E-17 T 19-04-2016 IPR002035 von Willebrand factor, type A ALIDE2_RS18580 f79b3690d168a9375ec50627566dad61 348 Pfam PF07584 Aerotolerance regulator N-terminal 1 75 1.6E-8 T 19-04-2016 IPR024163 Aerotolerance regulator, N-terminal ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 PANTHER PTHR20856:SF20 1059 1153 0.0 T 19-04-2016 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 PANTHER PTHR20856:SF20 1204 1374 0.0 T 19-04-2016 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 PANTHER PTHR20856:SF20 352 737 0.0 T 19-04-2016 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 PANTHER PTHR20856:SF20 9 242 0.0 T 19-04-2016 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 PANTHER PTHR20856:SF20 755 942 0.0 T 19-04-2016 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 17 1374 12.218 T 19-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Gene3D G3DSA:2.40.50.100 727 804 5.0E-29 T 19-04-2016 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Gene3D G3DSA:2.40.270.10 805 832 3.0E-83 T 19-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Gene3D G3DSA:2.40.270.10 1085 1274 3.0E-83 T 19-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Gene3D G3DSA:2.40.50.150 1070 1084 5.8E-56 T 19-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Gene3D G3DSA:2.40.50.150 840 949 5.8E-56 T 19-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Pfam PF00562 RNA polymerase Rpb2, domain 6 730 1296 1.4E-156 T 19-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Pfam PF04560 RNA polymerase Rpb2, domain 7 1298 1372 5.8E-27 T 19-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Gene3D G3DSA:2.30.150.10 604 668 1.3E-28 T 19-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1088 1100 - T 19-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Gene3D G3DSA:3.90.1100.10 457 603 2.6E-143 T 19-04-2016 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Gene3D G3DSA:3.90.1100.10 24 162 2.6E-143 T 19-04-2016 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Gene3D G3DSA:3.90.1100.10 671 725 2.6E-143 T 19-04-2016 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 13 1371 0.0 T 19-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Gene3D G3DSA:3.90.1110.10 358 456 2.4E-63 T 19-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Gene3D G3DSA:3.90.1110.10 164 241 2.4E-63 T 19-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Pfam PF04565 RNA polymerase Rpb2, domain 3 525 592 1.1E-30 T 19-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 SUPERFAMILY SSF64484 355 951 0.0 T 19-04-2016 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 SUPERFAMILY SSF64484 1064 1372 0.0 T 19-04-2016 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 SUPERFAMILY SSF64484 15 237 0.0 T 19-04-2016 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 PANTHER PTHR20856 1059 1153 0.0 T 19-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 PANTHER PTHR20856 1204 1374 0.0 T 19-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 PANTHER PTHR20856 352 737 0.0 T 19-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 PANTHER PTHR20856 9 242 0.0 T 19-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 PANTHER PTHR20856 755 942 0.0 T 19-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Pfam PF04563 RNA polymerase beta subunit 30 512 2.3E-33 T 19-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Pfam PF04561 RNA polymerase Rpb2, domain 2 162 234 1.3E-6 T 19-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Pfam PF04561 RNA polymerase Rpb2, domain 2 374 466 4.0E-14 T 19-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02050 b9f7bc81376402cf48dbc9b2ba569990 1374 Pfam PF10385 RNA polymerase beta subunit external 1 domain 603 668 1.3E-25 T 19-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS07600 fb7bc47d2fc56010ab5d8015d5c6cd02 309 SUPERFAMILY SSF53850 87 296 2.95E-39 T 19-04-2016 ALIDE2_RS07600 fb7bc47d2fc56010ab5d8015d5c6cd02 309 Gene3D G3DSA:3.40.190.10 176 263 7.2E-20 T 19-04-2016 ALIDE2_RS07600 fb7bc47d2fc56010ab5d8015d5c6cd02 309 Gene3D G3DSA:3.40.190.10 90 175 5.1E-11 T 19-04-2016 ALIDE2_RS07600 fb7bc47d2fc56010ab5d8015d5c6cd02 309 PANTHER PTHR30126 1 307 2.0E-68 T 19-04-2016 ALIDE2_RS07600 fb7bc47d2fc56010ab5d8015d5c6cd02 309 Gene3D G3DSA:1.10.10.10 2 84 1.9E-29 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07600 fb7bc47d2fc56010ab5d8015d5c6cd02 309 Pfam PF03466 LysR substrate binding domain 88 289 1.9E-42 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS07600 fb7bc47d2fc56010ab5d8015d5c6cd02 309 SUPERFAMILY SSF46785 2 86 5.99E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07600 fb7bc47d2fc56010ab5d8015d5c6cd02 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.6E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS07600 fb7bc47d2fc56010ab5d8015d5c6cd02 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.6E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS07600 fb7bc47d2fc56010ab5d8015d5c6cd02 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.6E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS07600 fb7bc47d2fc56010ab5d8015d5c6cd02 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.7E-21 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS02505 80b87ddfda31605b1e6ae56ac761f75b 261 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 236 258 6.2E-9 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALIDE2_RS02505 80b87ddfda31605b1e6ae56ac761f75b 261 Gene3D G3DSA:3.40.50.300 8 257 3.7E-67 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02505 80b87ddfda31605b1e6ae56ac761f75b 261 Pfam PF00005 ABC transporter 26 187 2.6E-28 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS02505 80b87ddfda31605b1e6ae56ac761f75b 261 SMART SM00382 35 236 1.2E-5 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS02505 80b87ddfda31605b1e6ae56ac761f75b 261 PANTHER PTHR24220:SF519 12 110 1.8E-122 T 19-04-2016 ALIDE2_RS02505 80b87ddfda31605b1e6ae56ac761f75b 261 PANTHER PTHR24220:SF519 126 258 1.8E-122 T 19-04-2016 ALIDE2_RS02505 80b87ddfda31605b1e6ae56ac761f75b 261 SUPERFAMILY SSF52540 9 258 7.62E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02505 80b87ddfda31605b1e6ae56ac761f75b 261 PANTHER PTHR24220 12 110 1.8E-122 T 19-04-2016 ALIDE2_RS02505 80b87ddfda31605b1e6ae56ac761f75b 261 PANTHER PTHR24220 126 258 1.8E-122 T 19-04-2016 ALIDE2_RS17640 b3279bdf2c9303328d529843a585318d 117 Pfam PF05899 Protein of unknown function (DUF861) 45 114 4.3E-20 T 19-04-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 ALIDE2_RS17640 b3279bdf2c9303328d529843a585318d 117 PANTHER PTHR33271 47 115 1.2E-17 T 19-04-2016 ALIDE2_RS17640 b3279bdf2c9303328d529843a585318d 117 SUPERFAMILY SSF51182 15 116 6.48E-14 T 19-04-2016 IPR011051 RmlC-like cupin domain ALIDE2_RS17640 b3279bdf2c9303328d529843a585318d 117 Gene3D G3DSA:2.60.120.10 28 116 2.3E-22 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 Gene3D G3DSA:1.10.3850.10 814 1025 3.5E-57 T 19-04-2016 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 Gene3D G3DSA:1.10.3850.10 279 498 6.8E-61 T 19-04-2016 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 SUPERFAMILY SSF82693 807 855 2.51E-28 T 19-04-2016 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 SUPERFAMILY SSF82866 831 1023 3.92E-43 T 19-04-2016 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 PANTHER PTHR32063 1 1038 0.0 T 19-04-2016 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 SUPERFAMILY SSF82693 274 330 4.45E-28 T 19-04-2016 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 Gene3D G3DSA:3.30.70.1430 568 669 1.4E-39 T 19-04-2016 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 SUPERFAMILY SSF82693 38 131 1.83E-23 T 19-04-2016 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 SUPERFAMILY SSF82866 297 497 1.83E-49 T 19-04-2016 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 Gene3D G3DSA:3.30.2090.10 721 805 1.2E-24 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 Gene3D G3DSA:3.30.2090.10 181 275 2.0E-27 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1042 0.0 T 19-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 SUPERFAMILY SSF82693 566 669 1.46E-34 T 19-04-2016 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.2E-106 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.2E-106 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.2E-106 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.2E-106 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 1.2E-106 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.2E-106 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.2E-106 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.2E-106 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.2E-106 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 PANTHER PTHR32063:SF13 1 1038 0.0 T 19-04-2016 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 Gene3D G3DSA:3.30.70.1430 38 139 7.0E-30 T 19-04-2016 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 SUPERFAMILY SSF82714 182 272 3.27E-22 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 SUPERFAMILY SSF82714 721 805 6.15E-22 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 SUPERFAMILY SSF82693 136 182 4.45E-28 T 19-04-2016 ALIDE2_RS01975 fea542e9636cb6faf7ae1a96b2dc863b 1051 SUPERFAMILY SSF82693 671 720 2.51E-28 T 19-04-2016 ALIDE2_RS03675 352efd77099bcd6af8ca52de8432b4e8 726 Gene3D G3DSA:3.40.1190.10 483 722 3.7E-7 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS03675 352efd77099bcd6af8ca52de8432b4e8 726 Gene3D G3DSA:3.30.1490.20 234 303 6.2E-17 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS03675 352efd77099bcd6af8ca52de8432b4e8 726 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 10 722 8.1E-242 T 19-04-2016 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 ALIDE2_RS03675 352efd77099bcd6af8ca52de8432b4e8 726 PANTHER PTHR23135:SF18 386 725 1.2E-17 T 19-04-2016 ALIDE2_RS03675 352efd77099bcd6af8ca52de8432b4e8 726 Gene3D G3DSA:3.30.470.20 212 233 1.8E-13 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS03675 352efd77099bcd6af8ca52de8432b4e8 726 Gene3D G3DSA:3.30.470.20 319 453 1.8E-13 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS03675 352efd77099bcd6af8ca52de8432b4e8 726 SUPERFAMILY SSF56059 220 478 1.33E-29 T 19-04-2016 ALIDE2_RS03675 352efd77099bcd6af8ca52de8432b4e8 726 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 220 306 1.2E-8 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS03675 352efd77099bcd6af8ca52de8432b4e8 726 PANTHER PTHR23135 386 725 1.2E-17 T 19-04-2016 ALIDE2_RS05020 4a90bf9c49c19bce7466187d4b1ea18b 245 Pfam PF01925 Sulfite exporter TauE/SafE 9 236 3.3E-26 T 19-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 ALIDE2_RS21660 aa1b39009bee0f37b2dcab3cd09b2235 253 PANTHER PTHR30363 1 253 3.6E-93 T 19-04-2016 ALIDE2_RS21660 aa1b39009bee0f37b2dcab3cd09b2235 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.5E-15 T 19-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ALIDE2_RS21660 aa1b39009bee0f37b2dcab3cd09b2235 253 SMART SM01134 73 234 4.9E-74 T 19-04-2016 ALIDE2_RS21660 aa1b39009bee0f37b2dcab3cd09b2235 253 Gene3D G3DSA:1.10.10.10 4 64 4.0E-12 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS21660 aa1b39009bee0f37b2dcab3cd09b2235 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.0E-8 T 19-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ALIDE2_RS21660 aa1b39009bee0f37b2dcab3cd09b2235 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.0E-8 T 19-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ALIDE2_RS21660 aa1b39009bee0f37b2dcab3cd09b2235 253 SUPERFAMILY SSF46785 3 61 1.33E-12 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS21660 aa1b39009bee0f37b2dcab3cd09b2235 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 19-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 ALIDE2_RS21660 aa1b39009bee0f37b2dcab3cd09b2235 253 PANTHER PTHR30363:SF1 1 253 3.6E-93 T 19-04-2016 ALIDE2_RS21660 aa1b39009bee0f37b2dcab3cd09b2235 253 SUPERFAMILY SSF100950 75 234 2.77E-27 T 19-04-2016 ALIDE2_RS21660 aa1b39009bee0f37b2dcab3cd09b2235 253 Pfam PF00455 DeoR C terminal sensor domain 75 232 1.6E-53 T 19-04-2016 IPR014036 DeoR C-terminal sensor domain ALIDE2_RS21660 aa1b39009bee0f37b2dcab3cd09b2235 253 Gene3D G3DSA:3.30.750.70 77 172 1.5E-13 T 19-04-2016 ALIDE2_RS21660 aa1b39009bee0f37b2dcab3cd09b2235 253 SMART SM00420 6 58 1.6E-12 T 19-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ALIDE2_RS05770 0ff5aefc4c42c57bb8f9abe96d85615a 702 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 296 472 3.1E-64 T 19-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS05770 0ff5aefc4c42c57bb8f9abe96d85615a 702 Gene3D G3DSA:1.10.1040.10 478 570 3.7E-19 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS05770 0ff5aefc4c42c57bb8f9abe96d85615a 702 Gene3D G3DSA:1.10.1040.10 612 697 7.8E-18 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS05770 0ff5aefc4c42c57bb8f9abe96d85615a 702 SUPERFAMILY SSF48179 475 578 4.85E-25 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS05770 0ff5aefc4c42c57bb8f9abe96d85615a 702 Gene3D G3DSA:3.90.226.10 5 206 5.0E-62 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS05770 0ff5aefc4c42c57bb8f9abe96d85615a 702 PANTHER PTHR23309 3 692 0.0 T 19-04-2016 ALIDE2_RS05770 0ff5aefc4c42c57bb8f9abe96d85615a 702 SUPERFAMILY SSF48179 602 692 9.35E-23 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS05770 0ff5aefc4c42c57bb8f9abe96d85615a 702 Gene3D G3DSA:3.40.50.720 290 477 3.0E-61 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS05770 0ff5aefc4c42c57bb8f9abe96d85615a 702 SUPERFAMILY SSF52096 5 285 1.32E-66 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS05770 0ff5aefc4c42c57bb8f9abe96d85615a 702 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 196 5.3E-40 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS05770 0ff5aefc4c42c57bb8f9abe96d85615a 702 PANTHER PTHR23309:SF9 3 692 0.0 T 19-04-2016 ALIDE2_RS05770 0ff5aefc4c42c57bb8f9abe96d85615a 702 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 476 569 9.5E-25 T 19-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS05770 0ff5aefc4c42c57bb8f9abe96d85615a 702 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 605 698 1.5E-8 T 19-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS05770 0ff5aefc4c42c57bb8f9abe96d85615a 702 SUPERFAMILY SSF51735 292 472 3.29E-56 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00770 f158bd840f1cb6650692eaaefd1c5d33 297 PANTHER PTHR13078 1 296 1.2E-197 T 19-04-2016 ALIDE2_RS00770 f158bd840f1cb6650692eaaefd1c5d33 297 SUPERFAMILY SSF54637 176 290 1.74E-27 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS00770 f158bd840f1cb6650692eaaefd1c5d33 297 PANTHER PTHR13078:SF55 1 296 1.2E-197 T 19-04-2016 ALIDE2_RS00770 f158bd840f1cb6650692eaaefd1c5d33 297 Pfam PF13452 N-terminal half of MaoC dehydratase 52 139 5.3E-12 T 19-04-2016 ALIDE2_RS00770 f158bd840f1cb6650692eaaefd1c5d33 297 SUPERFAMILY SSF54637 10 159 9.05E-40 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS00770 f158bd840f1cb6650692eaaefd1c5d33 297 Gene3D G3DSA:3.10.129.10 147 291 5.9E-39 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS00770 f158bd840f1cb6650692eaaefd1c5d33 297 Gene3D G3DSA:3.10.129.10 1 146 1.2E-42 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS00770 f158bd840f1cb6650692eaaefd1c5d33 297 Pfam PF01575 MaoC like domain 173 274 6.6E-25 T 19-04-2016 IPR002539 MaoC-like domain ALIDE2_RS10370 427513c6c0b6ff739839f15b2674bb7a 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 95 111 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ALIDE2_RS10370 427513c6c0b6ff739839f15b2674bb7a 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 310 326 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ALIDE2_RS10370 427513c6c0b6ff739839f15b2674bb7a 446 PANTHER PTHR23508:SF13 34 438 7.6E-150 T 19-04-2016 ALIDE2_RS10370 427513c6c0b6ff739839f15b2674bb7a 446 SUPERFAMILY SSF103473 32 440 4.84E-62 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS10370 427513c6c0b6ff739839f15b2674bb7a 446 Pfam PF00083 Sugar (and other) transporter 38 233 1.6E-19 T 19-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ALIDE2_RS10370 427513c6c0b6ff739839f15b2674bb7a 446 Pfam PF00083 Sugar (and other) transporter 253 435 1.9E-9 T 19-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ALIDE2_RS10370 427513c6c0b6ff739839f15b2674bb7a 446 ProSitePatterns PS00217 Sugar transport proteins signature 2. 145 170 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ALIDE2_RS10370 427513c6c0b6ff739839f15b2674bb7a 446 PANTHER PTHR23508 34 438 7.6E-150 T 19-04-2016 ALIDE2_RS10370 427513c6c0b6ff739839f15b2674bb7a 446 Gene3D G3DSA:1.20.1250.20 258 445 1.9E-16 T 19-04-2016 ALIDE2_RS10370 427513c6c0b6ff739839f15b2674bb7a 446 Gene3D G3DSA:1.20.1250.20 34 236 1.6E-24 T 19-04-2016 ALIDE2_RS18470 66cedd6db9a06882c269e3b21f6eaada 279 PANTHER PTHR12905 9 26 3.8E-23 T 19-04-2016 ALIDE2_RS18470 66cedd6db9a06882c269e3b21f6eaada 279 PANTHER PTHR12905 43 213 3.8E-23 T 19-04-2016 ALIDE2_RS18470 66cedd6db9a06882c269e3b21f6eaada 279 PANTHER PTHR12905:SF7 9 26 3.8E-23 T 19-04-2016 ALIDE2_RS18470 66cedd6db9a06882c269e3b21f6eaada 279 PANTHER PTHR12905:SF7 43 213 3.8E-23 T 19-04-2016 ALIDE2_RS18470 66cedd6db9a06882c269e3b21f6eaada 279 Gene3D G3DSA:3.60.21.10 9 256 7.8E-40 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS18470 66cedd6db9a06882c269e3b21f6eaada 279 Pfam PF00149 Calcineurin-like phosphoesterase 10 205 4.4E-19 T 19-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 ALIDE2_RS18470 66cedd6db9a06882c269e3b21f6eaada 279 SUPERFAMILY SSF56300 9 257 2.06E-56 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS18470 66cedd6db9a06882c269e3b21f6eaada 279 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 7 262 37.267 T 19-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 ALIDE2_RS23180 f7ca7abcec695a7f861d02ae3fc112fa 333 PANTHER PTHR11695:SF13 19 331 9.5E-87 T 19-04-2016 IPR014188 Acrylyl-CoA reductase AcuI ALIDE2_RS23180 f7ca7abcec695a7f861d02ae3fc112fa 333 PANTHER PTHR11695 19 331 9.5E-87 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS23180 f7ca7abcec695a7f861d02ae3fc112fa 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 91 1.8E-4 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ALIDE2_RS23180 f7ca7abcec695a7f861d02ae3fc112fa 333 Gene3D G3DSA:3.90.180.10 18 135 1.1E-8 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS23180 f7ca7abcec695a7f861d02ae3fc112fa 333 SUPERFAMILY SSF50129 5 146 5.63E-36 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS23180 f7ca7abcec695a7f861d02ae3fc112fa 333 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 7 328 2.0E-100 T 19-04-2016 IPR014188 Acrylyl-CoA reductase AcuI ALIDE2_RS23180 f7ca7abcec695a7f861d02ae3fc112fa 333 SMART SM00829 19 327 1.5E-4 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ALIDE2_RS23180 f7ca7abcec695a7f861d02ae3fc112fa 333 SUPERFAMILY SSF51735 120 284 3.04E-30 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS23180 f7ca7abcec695a7f861d02ae3fc112fa 333 Pfam PF00107 Zinc-binding dehydrogenase 162 277 3.1E-8 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ALIDE2_RS23180 f7ca7abcec695a7f861d02ae3fc112fa 333 Gene3D G3DSA:3.40.50.720 136 293 2.8E-51 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12210 ae3f0d71f522d3c1f1ef0acdb94f4c47 182 ProSitePatterns PS00893 Nudix box signature. 77 98 - T 19-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ALIDE2_RS12210 ae3f0d71f522d3c1f1ef0acdb94f4c47 182 Gene3D G3DSA:3.90.79.10 44 178 5.1E-31 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS12210 ae3f0d71f522d3c1f1ef0acdb94f4c47 182 SUPERFAMILY SSF55811 8 170 3.38E-34 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS12210 ae3f0d71f522d3c1f1ef0acdb94f4c47 182 Pfam PF14803 Nudix N-terminal 8 42 1.1E-14 T 19-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- ALIDE2_RS12210 ae3f0d71f522d3c1f1ef0acdb94f4c47 182 PANTHER PTHR22769:SF17 1 177 2.5E-62 T 19-04-2016 ALIDE2_RS12210 ae3f0d71f522d3c1f1ef0acdb94f4c47 182 Gene3D G3DSA:2.20.70.10 7 42 2.1E-16 T 19-04-2016 ALIDE2_RS12210 ae3f0d71f522d3c1f1ef0acdb94f4c47 182 Pfam PF00293 NUDIX domain 48 150 2.5E-13 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ALIDE2_RS12210 ae3f0d71f522d3c1f1ef0acdb94f4c47 182 PANTHER PTHR22769 1 177 2.5E-62 T 19-04-2016 ALIDE2_RS16380 ad1e36a706014acbda698223f05331c8 287 Pfam PF07505 Protein of unknown function (DUF5131) 5 281 4.2E-85 T 19-04-2016 IPR011101 Protein of unknown function DUF5131 ALIDE2_RS16820 958aab2c9f946a1565317bd74a5cb2d9 190 SUPERFAMILY SSF53335 24 178 3.99E-25 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS16820 958aab2c9f946a1565317bd74a5cb2d9 190 Pfam PF13649 Methyltransferase domain 36 131 1.4E-11 T 19-04-2016 ALIDE2_RS16820 958aab2c9f946a1565317bd74a5cb2d9 190 Gene3D G3DSA:3.40.50.150 21 181 1.1E-21 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS16820 958aab2c9f946a1565317bd74a5cb2d9 190 PANTHER PTHR10108 24 176 4.3E-12 T 19-04-2016 ALIDE2_RS00210 fef511a715c635ec433744ad11b18902 625 SUPERFAMILY SSF51445 45 326 1.9E-19 T 19-04-2016 IPR017853 Glycoside hydrolase superfamily ALIDE2_RS00210 fef511a715c635ec433744ad11b18902 625 Pfam PF02449 Beta-galactosidase 43 204 2.8E-7 T 19-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ALIDE2_RS00210 fef511a715c635ec433744ad11b18902 625 Gene3D G3DSA:3.20.20.80 47 354 5.5E-25 T 19-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ALIDE2_RS06615 0faccdd597c2998da62275f4c2ace1d4 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 19-04-2016 IPR020070 Ribosomal protein L9, N-terminal ALIDE2_RS06615 0faccdd597c2998da62275f4c2ace1d4 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 3.8E-20 T 19-04-2016 IPR020070 Ribosomal protein L9, N-terminal ALIDE2_RS06615 0faccdd597c2998da62275f4c2ace1d4 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.385 T 19-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS06615 0faccdd597c2998da62275f4c2ace1d4 150 Gene3D G3DSA:3.10.430.100 60 148 3.1E-27 T 19-04-2016 IPR020069 Ribosomal protein L9, C-terminal ALIDE2_RS06615 0faccdd597c2998da62275f4c2ace1d4 150 Gene3D G3DSA:3.40.5.10 1 52 2.9E-23 T 19-04-2016 IPR020070 Ribosomal protein L9, N-terminal ALIDE2_RS06615 0faccdd597c2998da62275f4c2ace1d4 150 SUPERFAMILY SSF55658 1 56 2.79E-17 T 19-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal ALIDE2_RS06615 0faccdd597c2998da62275f4c2ace1d4 150 SUPERFAMILY SSF55653 60 147 4.19E-25 T 19-04-2016 IPR020069 Ribosomal protein L9, C-terminal ALIDE2_RS06615 0faccdd597c2998da62275f4c2ace1d4 150 PANTHER PTHR21368 1 146 9.6E-46 T 19-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS06615 0faccdd597c2998da62275f4c2ace1d4 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 1.6E-42 T 19-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS06615 0faccdd597c2998da62275f4c2ace1d4 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 1.0E-25 T 19-04-2016 IPR020069 Ribosomal protein L9, C-terminal ALIDE2_RS18030 ffd593cfed9d097d56340327895dde6b 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 314 2.9E-73 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS18030 ffd593cfed9d097d56340327895dde6b 322 PANTHER PTHR30349:SF32 1 319 8.8E-75 T 19-04-2016 ALIDE2_RS18030 ffd593cfed9d097d56340327895dde6b 322 PIRSF PIRSF017082 1 321 6.9E-76 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS18030 ffd593cfed9d097d56340327895dde6b 322 PANTHER PTHR30349 1 319 8.8E-75 T 19-04-2016 ALIDE2_RS18030 ffd593cfed9d097d56340327895dde6b 322 SUPERFAMILY SSF53850 113 283 4.35E-13 T 19-04-2016 ALIDE2_RS10715 572f630584153f26fe705ba078cc8fb9 146 SUPERFAMILY SSF55961 1 146 1.79E-36 T 19-04-2016 ALIDE2_RS10715 572f630584153f26fe705ba078cc8fb9 146 PANTHER PTHR12901 1 146 2.1E-51 T 19-04-2016 ALIDE2_RS10715 572f630584153f26fe705ba078cc8fb9 146 Gene3D G3DSA:3.30.530.20 1 146 1.3E-50 T 19-04-2016 IPR023393 START-like domain ALIDE2_RS10715 572f630584153f26fe705ba078cc8fb9 146 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 12 137 5.5E-32 T 19-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain ALIDE2_RS10715 572f630584153f26fe705ba078cc8fb9 146 PANTHER PTHR12901:SF7 1 146 2.1E-51 T 19-04-2016 ALIDE2_RS13435 b93398b75ae9e90cfd57e140a292899a 674 PANTHER PTHR32182:SF7 322 485 1.6E-14 T 19-04-2016 ALIDE2_RS13435 b93398b75ae9e90cfd57e140a292899a 674 PANTHER PTHR32182 322 485 1.6E-14 T 19-04-2016 ALIDE2_RS13435 b93398b75ae9e90cfd57e140a292899a 674 Gene3D G3DSA:3.40.50.300 124 428 1.2E-17 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13435 b93398b75ae9e90cfd57e140a292899a 674 Gene3D G3DSA:3.40.50.300 1 68 1.2E-17 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13435 b93398b75ae9e90cfd57e140a292899a 674 SUPERFAMILY SSF52540 1 62 5.78E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13435 b93398b75ae9e90cfd57e140a292899a 674 Pfam PF13175 AAA ATPase domain 1 52 1.1E-14 T 19-04-2016 ALIDE2_RS13435 b93398b75ae9e90cfd57e140a292899a 674 Pfam PF13175 AAA ATPase domain 186 411 1.3E-26 T 19-04-2016 ALIDE2_RS13435 b93398b75ae9e90cfd57e140a292899a 674 SUPERFAMILY SSF52540 360 416 1.16E-6 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13435 b93398b75ae9e90cfd57e140a292899a 674 SUPERFAMILY SSF52540 25 75 1.16E-6 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13995 42b7c0911f8be1324c52e70cf4ca1e3c 482 Pfam PF06122 Conjugative relaxosome accessory transposon protein 37 395 4.0E-96 T 19-04-2016 IPR010927 Type IV conjugative transfer system protein TraH ALIDE2_RS04740 23add076f34ca3f2bf66f89b37a7537a 271 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 4.2E-10 T 19-04-2016 IPR010663 Zinc finger, FPG/IleRS-type ALIDE2_RS04740 23add076f34ca3f2bf66f89b37a7537a 271 SUPERFAMILY SSF57716 218 269 6.84E-17 T 19-04-2016 ALIDE2_RS04740 23add076f34ca3f2bf66f89b37a7537a 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 19-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 ALIDE2_RS04740 23add076f34ca3f2bf66f89b37a7537a 271 PANTHER PTHR22993:SF15 1 270 2.6E-97 T 19-04-2016 ALIDE2_RS04740 23add076f34ca3f2bf66f89b37a7537a 271 SMART SM00898 2 113 2.7E-42 T 19-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ALIDE2_RS04740 23add076f34ca3f2bf66f89b37a7537a 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 1.5E-83 T 19-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 ALIDE2_RS04740 23add076f34ca3f2bf66f89b37a7537a 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 112 1.3E-27 T 19-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ALIDE2_RS04740 23add076f34ca3f2bf66f89b37a7537a 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 40.22 T 19-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 ALIDE2_RS04740 23add076f34ca3f2bf66f89b37a7537a 271 PANTHER PTHR22993 1 270 2.6E-97 T 19-04-2016 ALIDE2_RS04740 23add076f34ca3f2bf66f89b37a7537a 271 Gene3D G3DSA:3.20.190.10 2 126 5.8E-33 T 19-04-2016 ALIDE2_RS04740 23add076f34ca3f2bf66f89b37a7537a 271 SMART SM01232 130 222 8.9E-44 T 19-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ALIDE2_RS04740 23add076f34ca3f2bf66f89b37a7537a 271 Gene3D G3DSA:1.10.8.50 130 270 7.5E-50 T 19-04-2016 ALIDE2_RS04740 23add076f34ca3f2bf66f89b37a7537a 271 SUPERFAMILY SSF46946 131 222 2.21E-27 T 19-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ALIDE2_RS04740 23add076f34ca3f2bf66f89b37a7537a 271 SUPERFAMILY SSF81624 2 139 1.96E-31 T 19-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ALIDE2_RS04740 23add076f34ca3f2bf66f89b37a7537a 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 9.5E-25 T 19-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ALIDE2_RS03870 d911aa88421ff9f6fa39f8043609976f 393 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 391 56.037 T 19-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 ALIDE2_RS03870 d911aa88421ff9f6fa39f8043609976f 393 Pfam PF02772 S-adenosylmethionine synthetase, central domain 118 239 6.8E-45 T 19-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 ALIDE2_RS03870 d911aa88421ff9f6fa39f8043609976f 393 SUPERFAMILY SSF55973 4 110 2.67E-45 T 19-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 ALIDE2_RS03870 d911aa88421ff9f6fa39f8043609976f 393 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 101 2.0E-40 T 19-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 ALIDE2_RS03870 d911aa88421ff9f6fa39f8043609976f 393 Gene3D G3DSA:3.30.300.10 252 391 1.2E-68 T 19-04-2016 ALIDE2_RS03870 d911aa88421ff9f6fa39f8043609976f 393 Gene3D G3DSA:3.30.300.10 139 241 1.2E-39 T 19-04-2016 ALIDE2_RS03870 d911aa88421ff9f6fa39f8043609976f 393 SUPERFAMILY SSF55973 113 240 2.04E-47 T 19-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 ALIDE2_RS03870 d911aa88421ff9f6fa39f8043609976f 393 PANTHER PTHR11964 1 386 2.6E-251 T 19-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 ALIDE2_RS03870 d911aa88421ff9f6fa39f8043609976f 393 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 267 275 - T 19-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 ALIDE2_RS03870 d911aa88421ff9f6fa39f8043609976f 393 SUPERFAMILY SSF55973 241 391 3.18E-68 T 19-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 ALIDE2_RS03870 d911aa88421ff9f6fa39f8043609976f 393 PIRSF PIRSF000497 1 392 2.7E-168 T 19-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 ALIDE2_RS03870 d911aa88421ff9f6fa39f8043609976f 393 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 241 380 4.7E-68 T 19-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 ALIDE2_RS03870 d911aa88421ff9f6fa39f8043609976f 393 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 390 9.1E-179 T 19-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 ALIDE2_RS03870 d911aa88421ff9f6fa39f8043609976f 393 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 19-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 ALIDE2_RS03870 d911aa88421ff9f6fa39f8043609976f 393 Gene3D G3DSA:3.30.300.10 12 138 3.7E-46 T 19-04-2016 ALIDE2_RS17080 7a0bc89f11bbe5a9298fceb2f4d98539 117 PANTHER PTHR10245 7 97 1.3E-16 T 19-04-2016 ALIDE2_RS17080 7a0bc89f11bbe5a9298fceb2f4d98539 117 SUPERFAMILY SSF47413 13 78 6.53E-18 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS17080 7a0bc89f11bbe5a9298fceb2f4d98539 117 Gene3D G3DSA:1.10.260.40 10 83 6.0E-22 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS17080 7a0bc89f11bbe5a9298fceb2f4d98539 117 SMART SM00530 18 73 9.3E-16 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS17080 7a0bc89f11bbe5a9298fceb2f4d98539 117 Pfam PF01381 Helix-turn-helix 19 73 2.1E-14 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS05835 2d35617a9e99466d667fc2cc32da798b 371 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 369 1.9E-24 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS05835 2d35617a9e99466d667fc2cc32da798b 371 Gene3D G3DSA:1.20.140.10 234 369 5.7E-29 T 19-04-2016 ALIDE2_RS05835 2d35617a9e99466d667fc2cc32da798b 371 PANTHER PTHR10909:SF341 1 359 6.1E-55 T 19-04-2016 ALIDE2_RS05835 2d35617a9e99466d667fc2cc32da798b 371 PANTHER PTHR10909 1 359 6.1E-55 T 19-04-2016 ALIDE2_RS05835 2d35617a9e99466d667fc2cc32da798b 371 SUPERFAMILY SSF56645 1 208 9.82E-35 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS05835 2d35617a9e99466d667fc2cc32da798b 371 Gene3D G3DSA:1.10.540.10 1 118 4.3E-18 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS05835 2d35617a9e99466d667fc2cc32da798b 371 SUPERFAMILY SSF47203 230 370 5.68E-33 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS05835 2d35617a9e99466d667fc2cc32da798b 371 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 6.1E-14 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS05835 2d35617a9e99466d667fc2cc32da798b 371 Gene3D G3DSA:2.40.110.10 129 208 2.1E-8 T 19-04-2016 ALIDE2_RS08075 1629d9bc873f487f06bbdc807a5c00c4 155 Gene3D G3DSA:3.40.50.9200 3 133 5.7E-32 T 19-04-2016 IPR015032 MTH538 TIR-like domain ALIDE2_RS08075 1629d9bc873f487f06bbdc807a5c00c4 155 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 5 118 5.9E-23 T 19-04-2016 IPR015032 MTH538 TIR-like domain ALIDE2_RS08075 1629d9bc873f487f06bbdc807a5c00c4 155 SUPERFAMILY SSF52206 6 133 9.42E-25 T 19-04-2016 IPR015032 MTH538 TIR-like domain ALIDE2_RS18675 e635c4cacc2f9289227fbe3afaf6f8c5 608 PANTHER PTHR33362:SF7 299 604 1.2E-204 T 19-04-2016 ALIDE2_RS18675 e635c4cacc2f9289227fbe3afaf6f8c5 608 PANTHER PTHR33362:SF7 10 217 1.2E-204 T 19-04-2016 ALIDE2_RS18675 e635c4cacc2f9289227fbe3afaf6f8c5 608 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 523 2.9E-109 T 19-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit ALIDE2_RS18675 e635c4cacc2f9289227fbe3afaf6f8c5 608 PANTHER PTHR33362 299 604 1.2E-204 T 19-04-2016 ALIDE2_RS18675 e635c4cacc2f9289227fbe3afaf6f8c5 608 PANTHER PTHR33362 10 217 1.2E-204 T 19-04-2016 ALIDE2_RS22735 70e7d9b10fdce2acc5b7e733aeb768a3 915 Pfam PF08335 GlnD PII-uridylyltransferase 288 419 3.5E-39 T 19-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 ALIDE2_RS22735 70e7d9b10fdce2acc5b7e733aeb768a3 915 Pfam PF08335 GlnD PII-uridylyltransferase 809 885 1.3E-7 T 19-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 ALIDE2_RS22735 70e7d9b10fdce2acc5b7e733aeb768a3 915 SUPERFAMILY SSF81301 504 784 1.9E-67 T 19-04-2016 ALIDE2_RS22735 70e7d9b10fdce2acc5b7e733aeb768a3 915 PANTHER PTHR30621 59 915 9.8E-207 T 19-04-2016 ALIDE2_RS22735 70e7d9b10fdce2acc5b7e733aeb768a3 915 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 58 242 2.4E-48 T 19-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 ALIDE2_RS22735 70e7d9b10fdce2acc5b7e733aeb768a3 915 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 530 775 4.8E-60 T 19-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 ALIDE2_RS22735 70e7d9b10fdce2acc5b7e733aeb768a3 915 SUPERFAMILY SSF81593 267 420 1.65E-40 T 19-04-2016 ALIDE2_RS22735 70e7d9b10fdce2acc5b7e733aeb768a3 915 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 7 914 17.003 T 19-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 ALIDE2_RS22735 70e7d9b10fdce2acc5b7e733aeb768a3 915 Gene3D G3DSA:3.30.460.10 619 781 8.0E-51 T 19-04-2016 ALIDE2_RS22735 70e7d9b10fdce2acc5b7e733aeb768a3 915 Gene3D G3DSA:3.30.460.10 89 259 1.7E-51 T 19-04-2016 ALIDE2_RS22735 70e7d9b10fdce2acc5b7e733aeb768a3 915 SUPERFAMILY SSF81301 18 248 2.62E-54 T 19-04-2016 ALIDE2_RS22735 70e7d9b10fdce2acc5b7e733aeb768a3 915 SUPERFAMILY SSF81593 785 913 8.63E-27 T 19-04-2016 ALIDE2_RS04485 88105e3a1c28246095bf33e39210e265 281 Gene3D G3DSA:3.40.50.150 90 272 1.1E-65 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS04485 88105e3a1c28246095bf33e39210e265 281 PANTHER PTHR18895:SF64 7 271 1.0E-93 T 19-04-2016 ALIDE2_RS04485 88105e3a1c28246095bf33e39210e265 281 PANTHER PTHR18895 7 271 1.0E-93 T 19-04-2016 ALIDE2_RS04485 88105e3a1c28246095bf33e39210e265 281 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 4 271 5.0E-70 T 19-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 ALIDE2_RS04485 88105e3a1c28246095bf33e39210e265 281 SUPERFAMILY SSF53335 20 257 7.45E-58 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS04485 88105e3a1c28246095bf33e39210e265 281 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 275 44.681 T 19-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 ALIDE2_RS04485 88105e3a1c28246095bf33e39210e265 281 Gene3D G3DSA:1.10.8.10 6 87 1.7E-25 T 19-04-2016 ALIDE2_RS04485 88105e3a1c28246095bf33e39210e265 281 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 182 188 - T 19-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ALIDE2_RS04485 88105e3a1c28246095bf33e39210e265 281 Pfam PF05175 Methyltransferase small domain 112 192 1.3E-16 T 19-04-2016 IPR007848 Methyltransferase small domain GO:0008168 ALIDE2_RS04485 88105e3a1c28246095bf33e39210e265 281 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 7.6E-87 T 19-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 ALIDE2_RS09810 6e48ebe144757d8796392553a329a2b3 206 PANTHER PTHR30346 10 186 2.5E-16 T 19-04-2016 ALIDE2_RS09810 6e48ebe144757d8796392553a329a2b3 206 Gene3D G3DSA:3.40.190.10 93 178 2.0E-8 T 19-04-2016 ALIDE2_RS09810 6e48ebe144757d8796392553a329a2b3 206 SUPERFAMILY SSF53850 10 203 1.81E-20 T 19-04-2016 ALIDE2_RS09810 6e48ebe144757d8796392553a329a2b3 206 Gene3D G3DSA:3.40.190.10 10 92 6.2E-7 T 19-04-2016 ALIDE2_RS09810 6e48ebe144757d8796392553a329a2b3 206 Pfam PF03466 LysR substrate binding domain 10 203 8.0E-20 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 Pfam PF02954 Bacterial regulatory protein, Fis family 442 480 7.9E-11 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 SUPERFAMILY SSF52172 8 196 2.42E-40 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 177 190 - T 19-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 Gene3D G3DSA:3.40.50.300 152 325 6.9E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 SMART SM00382 173 316 1.5E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 SMART SM00448 8 119 2.2E-33 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 Gene3D G3DSA:3.40.50.2300 6 124 8.0E-34 T 19-04-2016 ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 Pfam PF00072 Response regulator receiver domain 10 119 1.0E-25 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 Gene3D G3DSA:1.10.8.60 326 379 2.6E-18 T 19-04-2016 ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 PANTHER PTHR32071:SF28 10 494 1.6E-188 T 19-04-2016 ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 PANTHER PTHR32071 10 494 1.6E-188 T 19-04-2016 ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 447 464 7.1E-7 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 464 484 7.1E-7 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 SUPERFAMILY SSF46689 367 483 1.39E-11 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 Pfam PF00158 Sigma-54 interaction domain 153 319 6.7E-69 T 19-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 Gene3D G3DSA:1.10.10.60 380 483 2.2E-11 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS19030 614cdef6b19a0a4509610b5b89afb6e8 496 SUPERFAMILY SSF52540 153 393 1.62E-67 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 249 263 4.2E-9 T 19-04-2016 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 161 186 4.2E-9 T 19-04-2016 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 290 297 4.2E-9 T 19-04-2016 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 13 35 4.2E-9 T 19-04-2016 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 PANTHER PTHR22912:SF158 13 316 5.1E-58 T 19-04-2016 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 Hamap MF_01685 Ferredoxin--NADP reductase. 11 337 35.119 T 19-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 Gene3D G3DSA:3.50.50.60 135 252 1.8E-11 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 PANTHER PTHR22912 13 316 5.1E-58 T 19-04-2016 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 13 300 3.0E-20 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 SUPERFAMILY SSF51905 251 321 1.53E-29 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 SUPERFAMILY SSF51905 11 169 1.53E-29 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 3.5E-12 T 19-04-2016 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 3.5E-12 T 19-04-2016 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 264 3.5E-12 T 19-04-2016 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 3.5E-12 T 19-04-2016 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 117 135 3.5E-12 T 19-04-2016 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 SUPERFAMILY SSF51905 138 256 1.68E-8 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 Gene3D G3DSA:3.50.50.60 256 339 2.3E-37 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15390 e2f1679e6cf717bc8f72d5f49a78a89d 348 Gene3D G3DSA:3.50.50.60 11 132 2.3E-37 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS20060 0bbc51850b57c7f2af7c52d94da6b8e0 254 Pfam PF09339 IclR helix-turn-helix domain 12 61 1.0E-8 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS20060 0bbc51850b57c7f2af7c52d94da6b8e0 254 SUPERFAMILY SSF55781 85 242 9.81E-23 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS20060 0bbc51850b57c7f2af7c52d94da6b8e0 254 SUPERFAMILY SSF46785 9 81 4.09E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20060 0bbc51850b57c7f2af7c52d94da6b8e0 254 SMART SM00346 8 99 7.7E-25 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS20060 0bbc51850b57c7f2af7c52d94da6b8e0 254 PANTHER PTHR30136 7 242 5.6E-31 T 19-04-2016 ALIDE2_RS20060 0bbc51850b57c7f2af7c52d94da6b8e0 254 Gene3D G3DSA:3.30.450.40 78 240 2.2E-24 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS20060 0bbc51850b57c7f2af7c52d94da6b8e0 254 Gene3D G3DSA:1.10.10.10 7 77 6.1E-16 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 204 287 1.0E-7 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 Gene3D G3DSA:3.90.190.20 713 838 1.3E-22 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 Pfam PF08245 Mur ligase middle domain 475 685 1.6E-23 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 SMART SM01209 203 330 0.004 T 19-04-2016 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 3 852 0.0 T 19-04-2016 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 Gene3D G3DSA:3.30.470.20 196 217 3.3E-8 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 Gene3D G3DSA:3.30.470.20 303 342 3.3E-8 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 Gene3D G3DSA:3.30.470.20 385 445 3.3E-8 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 SUPERFAMILY SSF56059 204 334 3.36E-36 T 19-04-2016 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 SUPERFAMILY SSF56059 370 444 3.36E-36 T 19-04-2016 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 SUPERFAMILY SSF53244 711 838 9.62E-25 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 SUPERFAMILY SSF53623 433 722 1.44E-42 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 Gene3D G3DSA:3.30.1490.20 218 287 5.0E-20 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 Pfam PF02875 Mur ligase family, glutamate ligase domain 711 788 6.5E-12 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 Gene3D G3DSA:3.40.1190.10 469 703 4.1E-40 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 PANTHER PTHR23135:SF18 378 837 1.6E-120 T 19-04-2016 ALIDE2_RS03670 c34aba1a92a6eadcb46536bb95c5e5bb 863 PANTHER PTHR23135 378 837 1.6E-120 T 19-04-2016 ALIDE2_RS09665 b555aad79c76bccb6ae4fbdad281db42 608 Gene3D G3DSA:3.40.50.300 361 604 1.7E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09665 b555aad79c76bccb6ae4fbdad281db42 608 ProSitePatterns PS00211 ABC transporters family signature. 50 64 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS09665 b555aad79c76bccb6ae4fbdad281db42 608 ProSitePatterns PS00211 ABC transporters family signature. 494 508 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS09665 b555aad79c76bccb6ae4fbdad281db42 608 PANTHER PTHR24221 341 608 2.2E-106 T 19-04-2016 ALIDE2_RS09665 b555aad79c76bccb6ae4fbdad281db42 608 PANTHER PTHR24221 5 319 2.2E-106 T 19-04-2016 ALIDE2_RS09665 b555aad79c76bccb6ae4fbdad281db42 608 SUPERFAMILY SSF52540 356 599 5.63E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09665 b555aad79c76bccb6ae4fbdad281db42 608 Pfam PF00005 ABC transporter 379 521 2.0E-25 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS09665 b555aad79c76bccb6ae4fbdad281db42 608 SMART SM00382 388 590 1.5E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS09665 b555aad79c76bccb6ae4fbdad281db42 608 PANTHER PTHR24221:SF240 341 608 2.2E-106 T 19-04-2016 ALIDE2_RS09665 b555aad79c76bccb6ae4fbdad281db42 608 PANTHER PTHR24221:SF240 5 319 2.2E-106 T 19-04-2016 ALIDE2_RS09665 b555aad79c76bccb6ae4fbdad281db42 608 Gene3D G3DSA:1.20.1560.10 7 319 2.7E-47 T 19-04-2016 ALIDE2_RS09665 b555aad79c76bccb6ae4fbdad281db42 608 SUPERFAMILY SSF90123 7 319 1.01E-46 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ALIDE2_RS09665 b555aad79c76bccb6ae4fbdad281db42 608 Pfam PF00664 ABC transporter transmembrane region 31 290 2.2E-26 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ALIDE2_RS06520 dea9e5f8765acbaf1156f9270e122a69 41 Pfam PF08085 Entericidin EcnA/B family 20 40 2.8E-10 T 19-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 ALIDE2_RS10235 5b72a1721a83399e8a18cb81a91c1fb8 794 Pfam PF12161 HsdM N-terminal domain 16 151 2.5E-21 T 19-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain ALIDE2_RS10235 5b72a1721a83399e8a18cb81a91c1fb8 794 PANTHER PTHR30195 12 791 0.0 T 19-04-2016 ALIDE2_RS10235 5b72a1721a83399e8a18cb81a91c1fb8 794 PANTHER PTHR30195:SF10 12 791 0.0 T 19-04-2016 ALIDE2_RS10235 5b72a1721a83399e8a18cb81a91c1fb8 794 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 312 324 9.7E-11 T 19-04-2016 ALIDE2_RS10235 5b72a1721a83399e8a18cb81a91c1fb8 794 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 231 245 9.7E-11 T 19-04-2016 ALIDE2_RS10235 5b72a1721a83399e8a18cb81a91c1fb8 794 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 200 216 9.7E-11 T 19-04-2016 ALIDE2_RS10235 5b72a1721a83399e8a18cb81a91c1fb8 794 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 315 321 - T 19-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ALIDE2_RS10235 5b72a1721a83399e8a18cb81a91c1fb8 794 Gene3D G3DSA:3.40.50.150 202 457 1.0E-22 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS10235 5b72a1721a83399e8a18cb81a91c1fb8 794 Pfam PF02384 N-6 DNA Methylase 177 495 1.5E-51 T 19-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS10235 5b72a1721a83399e8a18cb81a91c1fb8 794 SUPERFAMILY SSF53335 15 53 8.56E-104 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS10235 5b72a1721a83399e8a18cb81a91c1fb8 794 SUPERFAMILY SSF53335 84 568 8.56E-104 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 Gene3D G3DSA:3.30.565.10 411 573 7.3E-40 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 517 4.1E-19 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 571 4.1E-19 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 552 4.1E-19 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 531 4.1E-19 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 SUPERFAMILY SSF55785 62 166 3.81E-7 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 PANTHER PTHR24423:SF544 199 722 1.2E-122 T 19-04-2016 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 PANTHER PTHR24423:SF544 46 67 1.2E-122 T 19-04-2016 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 PANTHER PTHR24423 199 722 1.2E-122 T 19-04-2016 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 PANTHER PTHR24423 46 67 1.2E-122 T 19-04-2016 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 SUPERFAMILY SSF55785 202 320 6.85E-15 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 Pfam PF13188 PAS domain 72 108 0.0011 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 Gene3D G3DSA:3.30.450.20 209 320 4.3E-17 T 19-04-2016 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 Gene3D G3DSA:3.30.450.20 68 168 6.2E-8 T 19-04-2016 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 Pfam PF00072 Response regulator receiver domain 604 715 5.4E-19 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 Gene3D G3DSA:3.40.50.2300 601 721 3.0E-29 T 19-04-2016 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 SMART SM00091 72 138 2.8 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 SMART SM00091 215 281 2.6E-4 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 Pfam PF00512 His Kinase A (phospho-acceptor) domain 346 409 4.3E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 SUPERFAMILY SSF52172 601 720 4.41E-30 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 Pfam PF00989 PAS fold 216 316 9.4E-8 T 19-04-2016 IPR013767 PAS fold GO:0006355 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 SMART SM00448 602 715 3.7E-23 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 SUPERFAMILY SSF55874 400 573 1.7E-39 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 SMART SM00388 344 410 1.3E-11 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 452 573 1.9E-20 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 Gene3D G3DSA:1.10.287.130 338 406 4.1E-5 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 212 328 1.0E-9 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 SMART SM00387 451 574 5.2E-30 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS11845 6e594815870b13f0ceaee3f8ff6bae46 722 SUPERFAMILY SSF47384 334 410 1.55E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS06205 bc020487d2c96478d161cfbe28475390 322 PIRSF PIRSF017082 2 322 6.4E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS06205 bc020487d2c96478d161cfbe28475390 322 PANTHER PTHR30349:SF32 17 319 2.1E-91 T 19-04-2016 ALIDE2_RS06205 bc020487d2c96478d161cfbe28475390 322 PANTHER PTHR30349 17 319 2.1E-91 T 19-04-2016 ALIDE2_RS06205 bc020487d2c96478d161cfbe28475390 322 SUPERFAMILY SSF53850 110 282 5.79E-9 T 19-04-2016 ALIDE2_RS06205 bc020487d2c96478d161cfbe28475390 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 318 2.4E-86 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS17025 915fdbac7786e6ffb3063c36cfa80ac9 361 PANTHER PTHR24220:SF150 7 246 5.8E-121 T 19-04-2016 ALIDE2_RS17025 915fdbac7786e6ffb3063c36cfa80ac9 361 SUPERFAMILY SSF50331 239 359 1.33E-12 T 19-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal ALIDE2_RS17025 915fdbac7786e6ffb3063c36cfa80ac9 361 SUPERFAMILY SSF52540 6 244 6.92E-86 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17025 915fdbac7786e6ffb3063c36cfa80ac9 361 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS17025 915fdbac7786e6ffb3063c36cfa80ac9 361 Pfam PF00005 ABC transporter 21 163 1.2E-34 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS17025 915fdbac7786e6ffb3063c36cfa80ac9 361 PANTHER PTHR24220 7 246 5.8E-121 T 19-04-2016 ALIDE2_RS17025 915fdbac7786e6ffb3063c36cfa80ac9 361 SMART SM00382 30 214 3.7E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS17025 915fdbac7786e6ffb3063c36cfa80ac9 361 Gene3D G3DSA:3.40.50.300 3 235 4.6E-80 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17025 915fdbac7786e6ffb3063c36cfa80ac9 361 Pfam PF08402 TOBE domain 280 358 3.3E-9 T 19-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 PANTHER PTHR32089 192 521 1.0E-132 T 19-04-2016 ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 PANTHER PTHR32089 53 162 1.0E-132 T 19-04-2016 ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 PANTHER PTHR32089:SF63 192 521 1.0E-132 T 19-04-2016 ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 PANTHER PTHR32089:SF63 53 162 1.0E-132 T 19-04-2016 ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 SMART SM00283 271 518 2.4E-87 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 Pfam PF00672 HAMP domain 199 265 5.3E-10 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 6.1E-51 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 193 213 6.1E-51 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 6.1E-51 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 292 321 6.1E-51 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 446 475 6.1E-51 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 SMART SM00304 218 270 1.4E-8 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 SUPERFAMILY SSF58104 238 519 3.79E-71 T 19-04-2016 ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 517 4.9E-62 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 Pfam PF12729 Four helix bundle sensory module for signal transduction 10 178 1.6E-8 T 19-04-2016 IPR024478 4HB MCP domain ALIDE2_RS00230 9e30b5108f9e8d1ad2cde2f55775793e 549 Gene3D G3DSA:1.10.287.950 286 490 4.8E-58 T 19-04-2016 ALIDE2_RS06120 d678144506fc76386110862002803aa9 360 PRINTS PR00114 Serine/threonine phosphatase family signature 46 73 2.3E-5 T 19-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 ALIDE2_RS06120 d678144506fc76386110862002803aa9 360 PRINTS PR00114 Serine/threonine phosphatase family signature 11 38 2.3E-5 T 19-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 ALIDE2_RS06120 d678144506fc76386110862002803aa9 360 Pfam PF00149 Calcineurin-like phosphoesterase 12 100 1.0E-10 T 19-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 ALIDE2_RS06120 d678144506fc76386110862002803aa9 360 Gene3D G3DSA:3.60.21.10 210 340 1.0E-38 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS06120 d678144506fc76386110862002803aa9 360 Gene3D G3DSA:3.60.21.10 8 155 1.0E-38 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS06120 d678144506fc76386110862002803aa9 360 SUPERFAMILY SSF56300 8 149 1.25E-29 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS06120 d678144506fc76386110862002803aa9 360 SUPERFAMILY SSF56300 242 272 1.25E-29 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS06120 d678144506fc76386110862002803aa9 360 SUPERFAMILY SSF56300 190 204 1.25E-29 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS06120 d678144506fc76386110862002803aa9 360 PANTHER PTHR24032 1 145 7.6E-24 T 19-04-2016 ALIDE2_RS19990 bddcdd1f6b36dc304eac1f7d85f556c7 417 PANTHER PTHR11119 1 403 3.8E-155 T 19-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS19990 bddcdd1f6b36dc304eac1f7d85f556c7 417 PIRSF PIRSF005353 1 415 3.7E-164 T 19-04-2016 IPR026033 Purine permease PbuG-like ALIDE2_RS19990 bddcdd1f6b36dc304eac1f7d85f556c7 417 Pfam PF00860 Permease family 4 374 3.5E-55 T 19-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS19990 bddcdd1f6b36dc304eac1f7d85f556c7 417 PANTHER PTHR11119:SF9 1 403 3.8E-155 T 19-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 ALIDE2_RS03160 77d626669b442d06e1c65990c8655fec 598 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 165 273 9.0E-15 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS03160 77d626669b442d06e1c65990c8655fec 598 Gene3D G3DSA:2.40.110.10 163 270 1.5E-25 T 19-04-2016 ALIDE2_RS03160 77d626669b442d06e1c65990c8655fec 598 PANTHER PTHR10909 1 478 1.5E-215 T 19-04-2016 ALIDE2_RS03160 77d626669b442d06e1c65990c8655fec 598 SUPERFAMILY SSF47203 290 469 1.22E-49 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS03160 77d626669b442d06e1c65990c8655fec 598 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 473 593 9.4E-27 T 19-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain ALIDE2_RS03160 77d626669b442d06e1c65990c8655fec 598 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 160 9.0E-14 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS03160 77d626669b442d06e1c65990c8655fec 598 Gene3D G3DSA:1.10.540.10 38 162 4.3E-20 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS03160 77d626669b442d06e1c65990c8655fec 598 PANTHER PTHR10909:SF296 1 478 1.5E-215 T 19-04-2016 ALIDE2_RS03160 77d626669b442d06e1c65990c8655fec 598 Gene3D G3DSA:1.20.140.10 271 467 1.1E-47 T 19-04-2016 ALIDE2_RS03160 77d626669b442d06e1c65990c8655fec 598 SUPERFAMILY SSF56645 37 294 2.09E-58 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS03160 77d626669b442d06e1c65990c8655fec 598 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 452 3.6E-21 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS03160 77d626669b442d06e1c65990c8655fec 598 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 7.8E-12 T 19-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria ALIDE2_RS09030 054f6837a2a3ce3dc6b8e3f0e593fd5d 147 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 34 143 5.1E-43 T 19-04-2016 IPR011090 Integrating conjugative element protein, PFL4709 ALIDE2_RS09030 054f6837a2a3ce3dc6b8e3f0e593fd5d 147 Pfam PF07511 Protein of unknown function (DUF1525) 34 144 2.3E-43 T 19-04-2016 IPR011090 Integrating conjugative element protein, PFL4709 ALIDE2_RS24130 d2f32a79db69b134ba26a6f22f51daa8 138 Pfam PF00175 Oxidoreductase NAD-binding domain 44 107 6.7E-5 T 19-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ALIDE2_RS24130 d2f32a79db69b134ba26a6f22f51daa8 138 Gene3D G3DSA:2.40.30.10 1 31 8.6E-7 T 19-04-2016 ALIDE2_RS24130 d2f32a79db69b134ba26a6f22f51daa8 138 SUPERFAMILY SSF63380 1 30 4.32E-5 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ALIDE2_RS24130 d2f32a79db69b134ba26a6f22f51daa8 138 Gene3D G3DSA:3.40.50.80 36 109 8.3E-15 T 19-04-2016 ALIDE2_RS24130 d2f32a79db69b134ba26a6f22f51daa8 138 PANTHER PTHR19370 1 104 7.0E-17 T 19-04-2016 ALIDE2_RS24130 d2f32a79db69b134ba26a6f22f51daa8 138 PRINTS PR00410 Phenol hydroxylase reductase family signature 27 36 2.0E-9 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS24130 d2f32a79db69b134ba26a6f22f51daa8 138 PRINTS PR00410 Phenol hydroxylase reductase family signature 67 76 2.0E-9 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS24130 d2f32a79db69b134ba26a6f22f51daa8 138 PRINTS PR00410 Phenol hydroxylase reductase family signature 42 61 2.0E-9 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS24130 d2f32a79db69b134ba26a6f22f51daa8 138 SUPERFAMILY SSF52343 21 107 2.1E-18 T 19-04-2016 ALIDE2_RS19860 1b0f42c0e931099d5bdebe564c2a7f80 334 SUPERFAMILY SSF51735 118 294 8.77E-54 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS19860 1b0f42c0e931099d5bdebe564c2a7f80 334 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 5 332 2.9E-142 T 19-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- ALIDE2_RS19860 1b0f42c0e931099d5bdebe564c2a7f80 334 PANTHER PTHR11695:SF610 19 331 9.6E-130 T 19-04-2016 ALIDE2_RS19860 1b0f42c0e931099d5bdebe564c2a7f80 334 Pfam PF00107 Zinc-binding dehydrogenase 158 284 5.4E-32 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ALIDE2_RS19860 1b0f42c0e931099d5bdebe564c2a7f80 334 SUPERFAMILY SSF50129 5 147 3.3E-37 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS19860 1b0f42c0e931099d5bdebe564c2a7f80 334 Gene3D G3DSA:3.40.50.720 153 269 3.4E-33 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS19860 1b0f42c0e931099d5bdebe564c2a7f80 334 SMART SM00829 14 330 5.1E-48 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ALIDE2_RS19860 1b0f42c0e931099d5bdebe564c2a7f80 334 PANTHER PTHR11695 19 331 9.6E-130 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS19860 1b0f42c0e931099d5bdebe564c2a7f80 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 105 4.3E-5 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ALIDE2_RS19860 1b0f42c0e931099d5bdebe564c2a7f80 334 Gene3D G3DSA:3.90.180.10 4 152 9.7E-41 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS00425 808e2c0eab955f77fa504d19ce1216c6 385 Gene3D G3DSA:2.40.110.10 129 226 1.1E-32 T 19-04-2016 ALIDE2_RS00425 808e2c0eab955f77fa504d19ce1216c6 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 132 144 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS00425 808e2c0eab955f77fa504d19ce1216c6 385 Gene3D G3DSA:1.10.540.10 12 126 4.2E-27 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00425 808e2c0eab955f77fa504d19ce1216c6 385 PANTHER PTHR10909:SF242 11 380 7.4E-82 T 19-04-2016 ALIDE2_RS00425 808e2c0eab955f77fa504d19ce1216c6 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 225 7.0E-23 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS00425 808e2c0eab955f77fa504d19ce1216c6 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 126 2.2E-24 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00425 808e2c0eab955f77fa504d19ce1216c6 385 SUPERFAMILY SSF56645 13 247 2.75E-65 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS00425 808e2c0eab955f77fa504d19ce1216c6 385 PANTHER PTHR10909 11 380 7.4E-82 T 19-04-2016 ALIDE2_RS00425 808e2c0eab955f77fa504d19ce1216c6 385 Gene3D G3DSA:1.20.140.10 227 329 1.7E-9 T 19-04-2016 ALIDE2_RS16885 efd908b5b98c94112a772b2bce3e2dde 375 Pfam PF13358 DDE superfamily endonuclease 187 332 7.4E-22 T 19-04-2016 ALIDE2_RS16885 efd908b5b98c94112a772b2bce3e2dde 375 PANTHER PTHR30347 32 373 1.4E-113 T 19-04-2016 ALIDE2_RS16885 efd908b5b98c94112a772b2bce3e2dde 375 Gene3D G3DSA:3.30.420.10 216 345 8.2E-6 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS16885 efd908b5b98c94112a772b2bce3e2dde 375 Gene3D G3DSA:1.10.10.60 99 146 3.8E-4 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS16885 efd908b5b98c94112a772b2bce3e2dde 375 SUPERFAMILY SSF53098 217 346 1.12E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS16885 efd908b5b98c94112a772b2bce3e2dde 375 Pfam PF13565 Homeodomain-like domain 74 145 1.7E-11 T 19-04-2016 ALIDE2_RS16885 efd908b5b98c94112a772b2bce3e2dde 375 SUPERFAMILY SSF46689 46 147 2.5E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS16885 efd908b5b98c94112a772b2bce3e2dde 375 PANTHER PTHR30347:SF1 32 373 1.4E-113 T 19-04-2016 ALIDE2_RS15000 4436dfaeabee0cfad2456c090458f05d 120 PANTHER PTHR33473 34 118 1.1E-31 T 19-04-2016 ALIDE2_RS15000 4436dfaeabee0cfad2456c090458f05d 120 SUPERFAMILY SSF54736 34 118 7.32E-32 T 19-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ALIDE2_RS15000 4436dfaeabee0cfad2456c090458f05d 120 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 36 114 3.2E-33 T 19-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 ALIDE2_RS15000 4436dfaeabee0cfad2456c090458f05d 120 Gene3D G3DSA:3.30.1390.10 23 118 3.4E-41 T 19-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ALIDE2_RS15000 4436dfaeabee0cfad2456c090458f05d 120 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 26 114 28.105 T 19-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS ALIDE2_RS16840 5d2c7812c92b3c4e83e199a479df7345 533 PANTHER PTHR30097 87 533 2.1E-118 T 19-04-2016 ALIDE2_RS16840 5d2c7812c92b3c4e83e199a479df7345 533 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 217 511 1.8E-42 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ALIDE2_RS16840 5d2c7812c92b3c4e83e199a479df7345 533 SUPERFAMILY SSF111369 231 452 1.07E-19 T 19-04-2016 ALIDE2_RS16840 5d2c7812c92b3c4e83e199a479df7345 533 PANTHER PTHR30097:SF4 87 533 2.1E-118 T 19-04-2016 ALIDE2_RS16840 5d2c7812c92b3c4e83e199a479df7345 533 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 215 446 2.6E-42 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS16840 5d2c7812c92b3c4e83e199a479df7345 533 Gene3D G3DSA:2.40.50.100 343 374 3.1E-14 T 19-04-2016 ALIDE2_RS16840 5d2c7812c92b3c4e83e199a479df7345 533 Gene3D G3DSA:2.40.50.100 232 265 3.1E-14 T 19-04-2016 ALIDE2_RS14340 05919dd955720b16fbf7b9eb45c22861 317 PANTHER PTHR30349:SF16 4 314 6.3E-92 T 19-04-2016 ALIDE2_RS14340 05919dd955720b16fbf7b9eb45c22861 317 PANTHER PTHR30349 4 314 6.3E-92 T 19-04-2016 ALIDE2_RS14340 05919dd955720b16fbf7b9eb45c22861 317 SUPERFAMILY SSF53850 103 278 1.09E-11 T 19-04-2016 ALIDE2_RS14340 05919dd955720b16fbf7b9eb45c22861 317 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 40 313 7.2E-94 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS14340 05919dd955720b16fbf7b9eb45c22861 317 PIRSF PIRSF017082 2 317 1.1E-87 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00280 227d036f23036ecbc3cd09316095f25f 659 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 639 2.3E-268 T 19-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 ALIDE2_RS00280 227d036f23036ecbc3cd09316095f25f 659 SUPERFAMILY SSF51905 97 269 2.84E-48 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS00280 227d036f23036ecbc3cd09316095f25f 659 SUPERFAMILY SSF51905 5 66 2.84E-48 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS00280 227d036f23036ecbc3cd09316095f25f 659 Pfam PF13932 GidA associated domain 410 634 2.0E-73 T 19-04-2016 IPR026904 GidA associated domain 3 ALIDE2_RS00280 227d036f23036ecbc3cd09316095f25f 659 Pfam PF01134 Glucose inhibited division protein A 8 406 1.5E-162 T 19-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 ALIDE2_RS00280 227d036f23036ecbc3cd09316095f25f 659 SMART SM01228 564 635 4.2E-45 T 19-04-2016 ALIDE2_RS00280 227d036f23036ecbc3cd09316095f25f 659 Gene3D G3DSA:3.50.50.60 6 221 2.3E-53 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS00280 227d036f23036ecbc3cd09316095f25f 659 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 281 295 - T 19-04-2016 IPR020595 MnmG-related, conserved site ALIDE2_RS00280 227d036f23036ecbc3cd09316095f25f 659 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 642 42.701 T 19-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 ALIDE2_RS00280 227d036f23036ecbc3cd09316095f25f 659 PANTHER PTHR11806 1 639 0.0 T 19-04-2016 ALIDE2_RS00280 227d036f23036ecbc3cd09316095f25f 659 PANTHER PTHR11806:SF0 1 639 0.0 T 19-04-2016 ALIDE2_RS00280 227d036f23036ecbc3cd09316095f25f 659 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 376 399 - T 19-04-2016 IPR020595 MnmG-related, conserved site ALIDE2_RS19820 bd79a77f316c3bf63d483836247c3b84 206 Hamap MF_00328 Guanylate kinase [gmk]. 3 186 35.337 T 19-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 ALIDE2_RS19820 bd79a77f316c3bf63d483836247c3b84 206 Gene3D G3DSA:3.40.50.300 87 199 4.2E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19820 bd79a77f316c3bf63d483836247c3b84 206 Gene3D G3DSA:3.40.50.300 3 15 4.2E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19820 bd79a77f316c3bf63d483836247c3b84 206 Pfam PF00625 Guanylate kinase 6 184 2.5E-48 T 19-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ALIDE2_RS19820 bd79a77f316c3bf63d483836247c3b84 206 SMART SM00072 4 186 1.3E-59 T 19-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ALIDE2_RS19820 bd79a77f316c3bf63d483836247c3b84 206 SUPERFAMILY SSF52540 3 189 8.8E-65 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19820 bd79a77f316c3bf63d483836247c3b84 206 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 183 2.9E-70 T 19-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 ALIDE2_RS19820 bd79a77f316c3bf63d483836247c3b84 206 PANTHER PTHR23117:SF13 5 188 2.1E-83 T 19-04-2016 ALIDE2_RS19820 bd79a77f316c3bf63d483836247c3b84 206 ProSitePatterns PS00856 Guanylate kinase-like signature. 39 56 - T 19-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 ALIDE2_RS19820 bd79a77f316c3bf63d483836247c3b84 206 Gene3D G3DSA:3.30.63.10 45 86 1.8E-25 T 19-04-2016 ALIDE2_RS19820 bd79a77f316c3bf63d483836247c3b84 206 Gene3D G3DSA:3.40.50.300 16 44 1.3E-4 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19820 bd79a77f316c3bf63d483836247c3b84 206 PANTHER PTHR23117 5 188 2.1E-83 T 19-04-2016 ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 PANTHER PTHR24031 304 610 4.6E-122 T 19-04-2016 ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 Pfam PF00270 DEAD/DEAH box helicase 298 442 3.0E-14 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 Pfam PF17191 RecG wedge domain 19 165 1.4E-11 T 19-04-2016 IPR033454 RecG, wedge domain ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 Gene3D G3DSA:3.40.50.300 260 462 5.4E-53 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 PANTHER PTHR24031 264 287 4.6E-122 T 19-04-2016 ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 PANTHER PTHR24031 638 654 4.6E-122 T 19-04-2016 ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 PANTHER PTHR24031:SF249 264 287 4.6E-122 T 19-04-2016 ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 PANTHER PTHR24031:SF249 638 654 4.6E-122 T 19-04-2016 ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 PANTHER PTHR24031:SF249 304 610 4.6E-122 T 19-04-2016 ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 SMART SM00490 514 597 2.9E-20 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 SMART SM00487 270 468 1.6E-27 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 Gene3D G3DSA:3.40.50.300 463 649 5.3E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 Pfam PF00271 Helicase conserved C-terminal domain 486 596 4.7E-19 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 SUPERFAMILY SSF52540 461 667 3.59E-41 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 SUPERFAMILY SSF52540 216 462 2.12E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 SUPERFAMILY SSF50249 20 167 1.44E-24 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 Gene3D G3DSA:2.40.50.140 45 135 6.4E-19 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS21695 074f0479a89dfa43ab5178ef34e8cbf4 705 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 32 676 1.5E-204 T 19-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 ALIDE2_RS16320 281ddc1872d11bf0bcbc5e4962207422 237 TIGRFAM TIGR03735 PRTRC_A: PRTRC system protein A 8 197 3.3E-61 T 19-04-2016 IPR022499 ParB-related, ThiF-related cassette, protein A ALIDE2_RS16320 281ddc1872d11bf0bcbc5e4962207422 237 Pfam PF09436 Domain of unknown function (DUF2016) 7 77 2.7E-24 T 19-04-2016 IPR018560 Domain of unknown function DUF2016 ALIDE2_RS16320 281ddc1872d11bf0bcbc5e4962207422 237 Gene3D G3DSA:3.40.140.10 85 161 2.4E-4 T 19-04-2016 ALIDE2_RS16320 281ddc1872d11bf0bcbc5e4962207422 237 Pfam PF14464 Prokaryotic homologs of the JAB domain 84 170 2.5E-14 T 19-04-2016 IPR028090 JAB domain, prokaryotic ALIDE2_RS16320 281ddc1872d11bf0bcbc5e4962207422 237 SUPERFAMILY SSF102712 82 164 6.93E-6 T 19-04-2016 ALIDE2_RS06600 eb21d8d053bce4b5e5685122b0d7b24c 124 PANTHER PTHR21011:SF1 1 118 2.0E-37 T 19-04-2016 ALIDE2_RS06600 eb21d8d053bce4b5e5685122b0d7b24c 124 PANTHER PTHR21011 1 118 2.0E-37 T 19-04-2016 ALIDE2_RS06600 eb21d8d053bce4b5e5685122b0d7b24c 124 Pfam PF01250 Ribosomal protein S6 3 90 3.7E-26 T 19-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS06600 eb21d8d053bce4b5e5685122b0d7b24c 124 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 19-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS06600 eb21d8d053bce4b5e5685122b0d7b24c 124 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 2.0E-32 T 19-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS06600 eb21d8d053bce4b5e5685122b0d7b24c 124 SUPERFAMILY SSF54995 1 103 1.83E-35 T 19-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS06600 eb21d8d053bce4b5e5685122b0d7b24c 124 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.427 T 19-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS06600 eb21d8d053bce4b5e5685122b0d7b24c 124 Gene3D G3DSA:3.30.70.60 1 104 3.8E-40 T 19-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 Pfam PF00690 Cation transporter/ATPase, N-terminus 59 119 1.3E-14 T 19-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 SUPERFAMILY SSF56784 377 397 1.24E-37 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 SUPERFAMILY SSF56784 503 746 1.24E-37 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 SMART SM00831 51 124 6.4E-8 T 19-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 Gene3D G3DSA:1.20.1110.10 104 156 9.1E-70 T 19-04-2016 IPR023298 P-type ATPase, transmembrane domain ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 Gene3D G3DSA:1.20.1110.10 616 900 9.1E-70 T 19-04-2016 IPR023298 P-type ATPase, transmembrane domain ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 618 736 3.9E-30 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 131 415 6.3E-33 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 Pfam PF00689 Cation transporting ATPase, C-terminus 730 896 1.7E-12 T 19-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 SUPERFAMILY SSF81665 280 373 1.44E-101 T 19-04-2016 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 SUPERFAMILY SSF81665 61 162 1.44E-101 T 19-04-2016 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 SUPERFAMILY SSF81665 696 904 1.44E-101 T 19-04-2016 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 PANTHER PTHR24093:SF356 70 906 0.0 T 19-04-2016 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 PANTHER PTHR24093 70 906 0.0 T 19-04-2016 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 Gene3D G3DSA:2.70.150.10 157 278 8.3E-39 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 Gene3D G3DSA:2.70.150.10 67 103 8.3E-39 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 Gene3D G3DSA:3.40.1110.10 371 554 7.9E-34 T 19-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 Pfam PF00702 haloacid dehalogenase-like hydrolase 375 661 1.1E-16 T 19-04-2016 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 SUPERFAMILY SSF81653 179 277 2.75E-26 T 19-04-2016 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 381 387 - T 19-04-2016 IPR018303 P-type ATPase, phosphorylation site ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 45 906 0.0 T 19-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 Pfam PF00122 E1-E2 ATPase 130 370 5.3E-56 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 860 881 3.7E-72 T 19-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 723 734 3.7E-72 T 19-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 755 768 3.7E-72 T 19-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 292 308 3.7E-72 T 19-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 705 720 3.7E-72 T 19-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 309 328 3.7E-72 T 19-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 775 791 3.7E-72 T 19-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 810 831 3.7E-72 T 19-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ALIDE2_RS00540 bacd4a3c6a4357360833ac4ed5e86d6b 906 PRINTS PR01836 Magnesium-transporting ATPase signature 413 426 3.7E-72 T 19-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ALIDE2_RS02705 c15f6d7d39af2e57db1501e0bba5b564 190 Gene3D G3DSA:1.10.8.10 146 189 1.9E-6 T 19-04-2016 ALIDE2_RS02705 c15f6d7d39af2e57db1501e0bba5b564 190 Pfam PF07499 RuvA, C-terminal domain 147 188 1.7E-10 T 19-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 ALIDE2_RS02705 c15f6d7d39af2e57db1501e0bba5b564 190 SUPERFAMILY SSF47781 66 133 1.75E-21 T 19-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 ALIDE2_RS02705 c15f6d7d39af2e57db1501e0bba5b564 190 Gene3D G3DSA:1.10.150.20 67 134 6.1E-29 T 19-04-2016 ALIDE2_RS02705 c15f6d7d39af2e57db1501e0bba5b564 190 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 189 30.773 T 19-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 ALIDE2_RS02705 c15f6d7d39af2e57db1501e0bba5b564 190 SUPERFAMILY SSF46929 147 189 5.1E-8 T 19-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 ALIDE2_RS02705 c15f6d7d39af2e57db1501e0bba5b564 190 Pfam PF14520 Helix-hairpin-helix domain 72 129 2.6E-18 T 19-04-2016 ALIDE2_RS02705 c15f6d7d39af2e57db1501e0bba5b564 190 SUPERFAMILY SSF50249 1 63 5.71E-18 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS02705 c15f6d7d39af2e57db1501e0bba5b564 190 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 188 1.8E-53 T 19-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 ALIDE2_RS02705 c15f6d7d39af2e57db1501e0bba5b564 190 Pfam PF01330 RuvA N terminal domain 1 62 5.5E-20 T 19-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 ALIDE2_RS02705 c15f6d7d39af2e57db1501e0bba5b564 190 PANTHER PTHR33796 2 190 1.3E-67 T 19-04-2016 ALIDE2_RS02705 c15f6d7d39af2e57db1501e0bba5b564 190 SMART SM00278 108 127 0.0035 T 19-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ALIDE2_RS02705 c15f6d7d39af2e57db1501e0bba5b564 190 SMART SM00278 73 92 0.21 T 19-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ALIDE2_RS02705 c15f6d7d39af2e57db1501e0bba5b564 190 Gene3D G3DSA:2.40.50.140 1 66 2.1E-27 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 Gene3D G3DSA:3.40.50.1370 1 138 1.5E-52 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 47 54 - T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 149 299 1.6E-48 T 19-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 302 75.434 T 19-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 142 3.5E-45 T 19-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 301 2.6E-108 T 19-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 SUPERFAMILY SSF53671 1 301 1.44E-101 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 45 59 2.1E-29 T 19-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 218 228 2.1E-29 T 19-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 118 132 2.1E-29 T 19-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 280 291 2.1E-29 T 19-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 78 91 2.1E-29 T 19-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 PANTHER PTHR11405:SF1 1 301 2.6E-130 T 19-04-2016 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 PANTHER PTHR11405 1 301 2.6E-130 T 19-04-2016 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 2.0E-26 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 2.0E-26 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 289 2.0E-26 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 263 2.0E-26 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS17555 4a512600c2940308228f369f9a8bd3f4 306 Gene3D G3DSA:3.40.50.1370 139 288 6.7E-58 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS09140 e76966254b738070845e1005ec1ea9ca 97 Gene3D G3DSA:1.10.10.60 8 91 1.0E-25 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS09140 e76966254b738070845e1005ec1ea9ca 97 PANTHER PTHR33215 1 96 1.0E-37 T 19-04-2016 ALIDE2_RS09140 e76966254b738070845e1005ec1ea9ca 97 Pfam PF01527 Transposase 1 76 6.1E-19 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS09140 e76966254b738070845e1005ec1ea9ca 97 SUPERFAMILY SSF46689 4 95 1.79E-22 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 SMART SM00865 207 326 5.1E-50 T 19-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 Gene3D G3DSA:3.30.1330.20 216 322 2.0E-40 T 19-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 PRINTS PR00423 Cell division protein FtsZ signature 212 233 5.7E-45 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 PRINTS PR00423 Cell division protein FtsZ signature 98 118 5.7E-45 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 PRINTS PR00423 Cell division protein FtsZ signature 126 147 5.7E-45 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 PRINTS PR00423 Cell division protein FtsZ signature 189 211 5.7E-45 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 PANTHER PTHR30314 1 404 2.4E-156 T 19-04-2016 ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 PANTHER PTHR30314:SF3 1 404 2.4E-156 T 19-04-2016 ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 SUPERFAMILY SSF52490 16 208 1.01E-61 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 Gene3D G3DSA:3.40.50.1440 16 215 4.8E-85 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 SMART SM00864 16 205 5.5E-102 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 19-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 Pfam PF12327 FtsZ family, C-terminal domain 222 317 1.9E-27 T 19-04-2016 IPR024757 Cell division protein FtsZ, C-terminal ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 332 2.4E-114 T 19-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 SUPERFAMILY SSF55307 207 325 2.98E-37 T 19-04-2016 IPR008280 Tubulin/FtsZ, C-terminal ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 173 1.0E-37 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 ALIDE2_RS20095 f0aef7e5408e152c2d4c25c882ce4a32 406 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 336 34.317 T 19-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 ALIDE2_RS08585 4b4b831c09533270ac8d347d8dddaac9 100 Pfam PF00216 Bacterial DNA-binding protein 1 89 8.5E-29 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS08585 4b4b831c09533270ac8d347d8dddaac9 100 SUPERFAMILY SSF47729 1 90 2.36E-28 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ALIDE2_RS08585 4b4b831c09533270ac8d347d8dddaac9 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 19-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 ALIDE2_RS08585 4b4b831c09533270ac8d347d8dddaac9 100 SMART SM00411 1 90 5.6E-35 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS08585 4b4b831c09533270ac8d347d8dddaac9 100 PANTHER PTHR33175 1 90 8.1E-31 T 19-04-2016 ALIDE2_RS08585 4b4b831c09533270ac8d347d8dddaac9 100 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.8E-12 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS08585 4b4b831c09533270ac8d347d8dddaac9 100 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.8E-12 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS08585 4b4b831c09533270ac8d347d8dddaac9 100 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.8E-12 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS08585 4b4b831c09533270ac8d347d8dddaac9 100 Gene3D G3DSA:4.10.520.10 1 92 7.8E-32 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ALIDE2_RS22030 4f91a374e611455a808eac4b69311f56 732 Gene3D G3DSA:3.20.20.360 266 296 2.8E-139 T 19-04-2016 ALIDE2_RS22030 4f91a374e611455a808eac4b69311f56 732 Gene3D G3DSA:3.20.20.360 89 135 2.8E-139 T 19-04-2016 ALIDE2_RS22030 4f91a374e611455a808eac4b69311f56 732 Gene3D G3DSA:3.20.20.360 336 596 2.8E-139 T 19-04-2016 ALIDE2_RS22030 4f91a374e611455a808eac4b69311f56 732 Gene3D G3DSA:1.10.1860.10 1 88 5.5E-37 T 19-04-2016 ALIDE2_RS22030 4f91a374e611455a808eac4b69311f56 732 Gene3D G3DSA:1.20.1220.12 598 730 1.2E-71 T 19-04-2016 ALIDE2_RS22030 4f91a374e611455a808eac4b69311f56 732 Gene3D G3DSA:2.170.170.11 136 264 6.6E-72 T 19-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 ALIDE2_RS22030 4f91a374e611455a808eac4b69311f56 732 Gene3D G3DSA:2.170.170.11 298 335 6.6E-72 T 19-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 ALIDE2_RS22030 4f91a374e611455a808eac4b69311f56 732 Hamap MF_00641 Malate synthase G [glcB]. 1 732 401.828 T 19-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 ALIDE2_RS22030 4f91a374e611455a808eac4b69311f56 732 SUPERFAMILY SSF51645 3 729 3.92E-296 T 19-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 ALIDE2_RS22030 4f91a374e611455a808eac4b69311f56 732 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 5 729 0.0 T 19-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 ALIDE2_RS22030 4f91a374e611455a808eac4b69311f56 732 PANTHER PTHR21631:SF7 31 41 9.1E-128 T 19-04-2016 ALIDE2_RS22030 4f91a374e611455a808eac4b69311f56 732 PANTHER PTHR21631:SF7 504 732 9.1E-128 T 19-04-2016 ALIDE2_RS22030 4f91a374e611455a808eac4b69311f56 732 Pfam PF01274 Malate synthase 18 704 2.1E-172 T 19-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 ALIDE2_RS22030 4f91a374e611455a808eac4b69311f56 732 PANTHER PTHR21631 31 41 9.1E-128 T 19-04-2016 ALIDE2_RS22030 4f91a374e611455a808eac4b69311f56 732 PANTHER PTHR21631 504 732 9.1E-128 T 19-04-2016 ALIDE2_RS03600 a7c8087fc8cc01bf9e37f0226e4f0e1b 261 Pfam PF13365 Trypsin-like peptidase domain 56 221 9.1E-19 T 19-04-2016 ALIDE2_RS03600 a7c8087fc8cc01bf9e37f0226e4f0e1b 261 Gene3D G3DSA:2.40.10.10 132 256 3.2E-16 T 19-04-2016 ALIDE2_RS03600 a7c8087fc8cc01bf9e37f0226e4f0e1b 261 SUPERFAMILY SSF50494 25 257 2.79E-34 T 19-04-2016 IPR009003 Peptidase S1, PA clan ALIDE2_RS03600 a7c8087fc8cc01bf9e37f0226e4f0e1b 261 PANTHER PTHR22939 29 256 2.1E-20 T 19-04-2016 ALIDE2_RS03600 a7c8087fc8cc01bf9e37f0226e4f0e1b 261 Gene3D G3DSA:2.40.10.10 25 131 3.7E-12 T 19-04-2016 ALIDE2_RS03355 ce4bb7767f01f4db3fb99d00870386b0 163 Pfam PF01037 Lrp/AsnC ligand binding domain 77 149 4.2E-11 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ALIDE2_RS03355 ce4bb7767f01f4db3fb99d00870386b0 163 SMART SM00344 8 120 1.7E-22 T 19-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ALIDE2_RS03355 ce4bb7767f01f4db3fb99d00870386b0 163 SUPERFAMILY SSF46785 8 65 1.25E-13 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS03355 ce4bb7767f01f4db3fb99d00870386b0 163 SUPERFAMILY SSF54909 72 152 3.08E-11 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel ALIDE2_RS03355 ce4bb7767f01f4db3fb99d00870386b0 163 Pfam PF13404 AsnC-type helix-turn-helix domain 8 48 2.0E-16 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS03355 ce4bb7767f01f4db3fb99d00870386b0 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 6.3E-9 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS03355 ce4bb7767f01f4db3fb99d00870386b0 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 6.3E-9 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS03355 ce4bb7767f01f4db3fb99d00870386b0 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 6.3E-9 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS03355 ce4bb7767f01f4db3fb99d00870386b0 163 PANTHER PTHR30154 8 161 1.1E-41 T 19-04-2016 ALIDE2_RS03355 ce4bb7767f01f4db3fb99d00870386b0 163 PANTHER PTHR30154:SF28 8 161 1.1E-41 T 19-04-2016 ALIDE2_RS03355 ce4bb7767f01f4db3fb99d00870386b0 163 Gene3D G3DSA:3.30.70.920 70 148 2.3E-17 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ALIDE2_RS03355 ce4bb7767f01f4db3fb99d00870386b0 163 Gene3D G3DSA:1.10.10.10 8 59 7.3E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS19715 ec53cf0f18155b2c14aea54ca0825387 300 SMART SM00331 3 238 1.4E-14 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ALIDE2_RS19715 ec53cf0f18155b2c14aea54ca0825387 300 Pfam PF13672 Protein phosphatase 2C 9 211 8.7E-17 T 19-04-2016 ALIDE2_RS19715 ec53cf0f18155b2c14aea54ca0825387 300 SMART SM00332 2 236 1.0E-9 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ALIDE2_RS19715 ec53cf0f18155b2c14aea54ca0825387 300 PANTHER PTHR13832 5 234 1.9E-33 T 19-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 ALIDE2_RS19715 ec53cf0f18155b2c14aea54ca0825387 300 PANTHER PTHR13832:SF278 5 234 1.9E-33 T 19-04-2016 ALIDE2_RS19715 ec53cf0f18155b2c14aea54ca0825387 300 Gene3D G3DSA:3.60.40.10 2 238 1.5E-56 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ALIDE2_RS19715 ec53cf0f18155b2c14aea54ca0825387 300 SUPERFAMILY SSF81606 1 237 1.15E-50 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ALIDE2_RS02025 28ee3a3e2f09b76029373d1cdb2ce846 196 SUPERFAMILY SSF82679 22 133 2.09E-39 T 19-04-2016 IPR006645 NusG, N-terminal GO:0006355 ALIDE2_RS02025 28ee3a3e2f09b76029373d1cdb2ce846 196 Pfam PF00467 KOW motif 145 173 6.5E-6 T 19-04-2016 IPR005824 KOW ALIDE2_RS02025 28ee3a3e2f09b76029373d1cdb2ce846 196 SMART SM00738 21 130 5.0E-46 T 19-04-2016 IPR006645 NusG, N-terminal GO:0006355 ALIDE2_RS02025 28ee3a3e2f09b76029373d1cdb2ce846 196 PRINTS PR00338 Transcription termination factor NUSG signature 154 169 4.2E-19 T 19-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 ALIDE2_RS02025 28ee3a3e2f09b76029373d1cdb2ce846 196 PRINTS PR00338 Transcription termination factor NUSG signature 76 88 4.2E-19 T 19-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 ALIDE2_RS02025 28ee3a3e2f09b76029373d1cdb2ce846 196 PRINTS PR00338 Transcription termination factor NUSG signature 172 188 4.2E-19 T 19-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 ALIDE2_RS02025 28ee3a3e2f09b76029373d1cdb2ce846 196 Pfam PF02357 Transcription termination factor nusG 23 126 1.6E-27 T 19-04-2016 IPR006645 NusG, N-terminal GO:0006355 ALIDE2_RS02025 28ee3a3e2f09b76029373d1cdb2ce846 196 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 21 196 24.466 T 19-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 ALIDE2_RS02025 28ee3a3e2f09b76029373d1cdb2ce846 196 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 24 195 2.7E-66 T 19-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 ALIDE2_RS02025 28ee3a3e2f09b76029373d1cdb2ce846 196 SUPERFAMILY SSF50104 140 195 3.01E-18 T 19-04-2016 IPR008991 Translation protein SH3-like domain ALIDE2_RS02025 28ee3a3e2f09b76029373d1cdb2ce846 196 Gene3D G3DSA:3.30.70.940 23 132 6.1E-46 T 19-04-2016 IPR006645 NusG, N-terminal GO:0006355 ALIDE2_RS02025 28ee3a3e2f09b76029373d1cdb2ce846 196 PANTHER PTHR30265 23 195 4.4E-74 T 19-04-2016 ALIDE2_RS02025 28ee3a3e2f09b76029373d1cdb2ce846 196 SMART SM00739 142 169 3.9E-4 T 19-04-2016 IPR005824 KOW ALIDE2_RS02025 28ee3a3e2f09b76029373d1cdb2ce846 196 ProSitePatterns PS01014 Transcription termination factor nusG signature. 179 188 - T 19-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site ALIDE2_RS02025 28ee3a3e2f09b76029373d1cdb2ce846 196 Gene3D G3DSA:2.30.30.30 135 195 1.7E-29 T 19-04-2016 IPR014722 Ribosomal protein L2 domain 2 ALIDE2_RS20705 3629f593cac095a9462d450bada4b92f 221 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 84 104 - T 19-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ALIDE2_RS20705 3629f593cac095a9462d450bada4b92f 221 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 44 51 - T 19-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ALIDE2_RS20705 3629f593cac095a9462d450bada4b92f 221 Gene3D G3DSA:3.40.1050.10 4 212 4.8E-73 T 19-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ALIDE2_RS20705 3629f593cac095a9462d450bada4b92f 221 PANTHER PTHR11002 6 209 6.6E-102 T 19-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ALIDE2_RS20705 3629f593cac095a9462d450bada4b92f 221 SMART SM00947 32 194 1.4E-66 T 19-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ALIDE2_RS20705 3629f593cac095a9462d450bada4b92f 221 PANTHER PTHR11002:SF20 6 209 6.6E-102 T 19-04-2016 ALIDE2_RS20705 3629f593cac095a9462d450bada4b92f 221 SUPERFAMILY SSF53056 5 211 4.84E-72 T 19-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ALIDE2_RS20705 3629f593cac095a9462d450bada4b92f 221 Pfam PF00484 Carbonic anhydrase 39 189 6.6E-49 T 19-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ALIDE2_RS05930 b78a4839cc467b4f4208b04979f5adc3 486 SUPERFAMILY SSF53720 2 472 2.88E-114 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS05930 b78a4839cc467b4f4208b04979f5adc3 486 PIRSF PIRSF036492 1 483 3.3E-158 T 19-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 ALIDE2_RS05930 b78a4839cc467b4f4208b04979f5adc3 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 212 219 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS05930 b78a4839cc467b4f4208b04979f5adc3 486 PANTHER PTHR11699:SF15 1 476 1.2E-165 T 19-04-2016 ALIDE2_RS05930 b78a4839cc467b4f4208b04979f5adc3 486 Gene3D G3DSA:3.40.605.10 2 226 2.5E-55 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS05930 b78a4839cc467b4f4208b04979f5adc3 486 PANTHER PTHR11699 1 476 1.2E-165 T 19-04-2016 ALIDE2_RS05930 b78a4839cc467b4f4208b04979f5adc3 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 240 251 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS05930 b78a4839cc467b4f4208b04979f5adc3 486 Pfam PF00171 Aldehyde dehydrogenase family 2 445 4.8E-85 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS05930 b78a4839cc467b4f4208b04979f5adc3 486 Gene3D G3DSA:3.40.309.10 227 427 2.0E-51 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS18370 c947242a5148aee5cd494ccafae40941 318 PIRSF PIRSF005355 13 317 1.4E-45 T 19-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 ALIDE2_RS18370 c947242a5148aee5cd494ccafae40941 318 Pfam PF01040 UbiA prenyltransferase family 37 281 3.9E-25 T 19-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 ALIDE2_RS18370 c947242a5148aee5cd494ccafae40941 318 PANTHER PTHR13929 19 313 1.3E-32 T 19-04-2016 ALIDE2_RS12290 962af9e11d9e939705b4a99f4dd64ca1 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 19-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 ALIDE2_RS12290 962af9e11d9e939705b4a99f4dd64ca1 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 177 211 1.7E-13 T 19-04-2016 IPR001451 Hexapeptide repeat ALIDE2_RS12290 962af9e11d9e939705b4a99f4dd64ca1 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 274 54.964 T 19-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 ALIDE2_RS12290 962af9e11d9e939705b4a99f4dd64ca1 274 PANTHER PTHR19136:SF52 15 273 1.0E-115 T 19-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 ALIDE2_RS12290 962af9e11d9e939705b4a99f4dd64ca1 274 Gene3D G3DSA:2.160.10.10 91 257 4.0E-59 T 19-04-2016 ALIDE2_RS12290 962af9e11d9e939705b4a99f4dd64ca1 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 273 1.0E-131 T 19-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 ALIDE2_RS12290 962af9e11d9e939705b4a99f4dd64ca1 274 SUPERFAMILY SSF51161 4 258 6.52E-73 T 19-04-2016 IPR011004 Trimeric LpxA-like ALIDE2_RS12290 962af9e11d9e939705b4a99f4dd64ca1 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 71 1.9E-23 T 19-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 ALIDE2_RS12290 962af9e11d9e939705b4a99f4dd64ca1 274 Gene3D G3DSA:1.10.166.10 2 72 6.2E-29 T 19-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 ALIDE2_RS12290 962af9e11d9e939705b4a99f4dd64ca1 274 PANTHER PTHR19136 15 273 1.0E-115 T 19-04-2016 ALIDE2_RS03465 375f8843e6cd8dc2d581b0afaff6c8bf 412 SUPERFAMILY SSF53756 6 394 2.64E-31 T 19-04-2016 ALIDE2_RS03465 375f8843e6cd8dc2d581b0afaff6c8bf 412 Pfam PF13692 Glycosyl transferases group 1 231 366 1.4E-28 T 19-04-2016 ALIDE2_RS03465 375f8843e6cd8dc2d581b0afaff6c8bf 412 TIGRFAM TIGR03087 stp1: sugar transferase, PEP-CTERM/EpsH1 system associated 7 400 3.6E-163 T 19-04-2016 IPR017521 Sugar transferase, PEP-CTERM, Stp1 ALIDE2_RS02145 9c13263d6bb240dfbd944f8b550b5c12 398 SUPERFAMILY SSF52540 47 259 1.24E-18 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02145 9c13263d6bb240dfbd944f8b550b5c12 398 Pfam PF13481 AAA domain 37 207 1.8E-38 T 19-04-2016 ALIDE2_RS02145 9c13263d6bb240dfbd944f8b550b5c12 398 Gene3D G3DSA:3.40.50.300 40 265 8.6E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07245 a8210445abfd061080a605d0b917c064 164 PANTHER PTHR22778 1 162 1.4E-43 T 19-04-2016 ALIDE2_RS07245 a8210445abfd061080a605d0b917c064 164 SUPERFAMILY SSF53597 2 162 2.1E-56 T 19-04-2016 IPR024072 Dihydrofolate reductase-like domain ALIDE2_RS07245 a8210445abfd061080a605d0b917c064 164 Gene3D G3DSA:3.40.430.10 1 162 1.6E-59 T 19-04-2016 IPR024072 Dihydrofolate reductase-like domain ALIDE2_RS07245 a8210445abfd061080a605d0b917c064 164 PANTHER PTHR22778:SF16 1 162 1.4E-43 T 19-04-2016 ALIDE2_RS07245 a8210445abfd061080a605d0b917c064 164 PIRSF PIRSF000194 1 164 2.3E-62 T 19-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 ALIDE2_RS07245 a8210445abfd061080a605d0b917c064 164 Pfam PF00186 Dihydrofolate reductase 3 161 1.0E-55 T 19-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 ALIDE2_RS07245 a8210445abfd061080a605d0b917c064 164 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 19-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 ALIDE2_RS07245 a8210445abfd061080a605d0b917c064 164 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.7E-17 T 19-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 ALIDE2_RS07245 a8210445abfd061080a605d0b917c064 164 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.7E-17 T 19-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 ALIDE2_RS07245 a8210445abfd061080a605d0b917c064 164 PRINTS PR00070 Dihydrofolate reductase signature 96 110 1.7E-17 T 19-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 ALIDE2_RS07245 a8210445abfd061080a605d0b917c064 164 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.7E-17 T 19-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 ALIDE2_RS09260 92be03310a1cf57671ff457881389eff 313 Pfam PF01012 Electron transfer flavoprotein domain 4 170 5.3E-41 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS09260 92be03310a1cf57671ff457881389eff 313 PIRSF PIRSF000089 1 313 1.7E-105 T 19-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 ALIDE2_RS09260 92be03310a1cf57671ff457881389eff 313 PANTHER PTHR10909 107 310 6.2E-104 T 19-04-2016 ALIDE2_RS09260 92be03310a1cf57671ff457881389eff 313 PANTHER PTHR10909:SF299 107 310 6.2E-104 T 19-04-2016 ALIDE2_RS09260 92be03310a1cf57671ff457881389eff 313 SUPERFAMILY SSF52402 2 185 8.37E-53 T 19-04-2016 ALIDE2_RS09260 92be03310a1cf57671ff457881389eff 313 SMART SM00893 3 185 2.1E-46 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS09260 92be03310a1cf57671ff457881389eff 313 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 257 283 - T 19-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site ALIDE2_RS09260 92be03310a1cf57671ff457881389eff 313 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 193 276 9.7E-34 T 19-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal ALIDE2_RS09260 92be03310a1cf57671ff457881389eff 313 Gene3D G3DSA:3.40.50.1220 187 313 4.6E-58 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS09260 92be03310a1cf57671ff457881389eff 313 SUPERFAMILY SSF52467 193 312 8.18E-44 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS09260 92be03310a1cf57671ff457881389eff 313 Gene3D G3DSA:3.40.50.620 1 172 1.9E-57 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS04125 73f449152a05bc348c0a76c150872af4 216 PANTHER PTHR21403:SF3 1 207 2.2E-82 T 19-04-2016 ALIDE2_RS04125 73f449152a05bc348c0a76c150872af4 216 PANTHER PTHR21403 1 207 2.2E-82 T 19-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 ALIDE2_RS04125 73f449152a05bc348c0a76c150872af4 216 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 149 170 - T 19-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 ALIDE2_RS04125 73f449152a05bc348c0a76c150872af4 216 SUPERFAMILY SSF53850 5 209 2.61E-64 T 19-04-2016 ALIDE2_RS04125 73f449152a05bc348c0a76c150872af4 216 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 4 214 54.849 T 19-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 ALIDE2_RS04125 73f449152a05bc348c0a76c150872af4 216 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 190 3.7E-58 T 19-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 ALIDE2_RS04125 73f449152a05bc348c0a76c150872af4 216 Gene3D G3DSA:3.40.190.10 4 148 7.2E-42 T 19-04-2016 ALIDE2_RS04125 73f449152a05bc348c0a76c150872af4 216 Pfam PF01634 ATP phosphoribosyltransferase 54 208 2.8E-48 T 19-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 ALIDE2_RS08435 40616d408f5a80a0f75f27ecd0c77ae4 403 Gene3D G3DSA:3.30.1540.10 227 307 5.3E-27 T 19-04-2016 ALIDE2_RS08435 40616d408f5a80a0f75f27ecd0c77ae4 403 SUPERFAMILY SSF89796 9 398 1.57E-131 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS08435 40616d408f5a80a0f75f27ecd0c77ae4 403 Gene3D G3DSA:3.40.50.10540 308 399 2.2E-106 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS08435 40616d408f5a80a0f75f27ecd0c77ae4 403 Gene3D G3DSA:3.40.50.10540 9 220 2.2E-106 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS08435 40616d408f5a80a0f75f27ecd0c77ae4 403 Pfam PF02515 CoA-transferase family III 11 376 9.4E-125 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS08435 40616d408f5a80a0f75f27ecd0c77ae4 403 PANTHER PTHR24023 47 386 1.0E-33 T 19-04-2016 ALIDE2_RS08435 40616d408f5a80a0f75f27ecd0c77ae4 403 PANTHER PTHR24023:SF593 47 386 1.0E-33 T 19-04-2016 ALIDE2_RS01965 dc8b9ad1f96ccf653a33d5773d8d94d8 278 PANTHER PTHR40942 128 278 6.5E-22 T 19-04-2016 ALIDE2_RS01965 dc8b9ad1f96ccf653a33d5773d8d94d8 278 PRINTS PR00607 Class IE cytochrome C signature 210 221 2.4E-12 T 19-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 ALIDE2_RS01965 dc8b9ad1f96ccf653a33d5773d8d94d8 278 PRINTS PR00607 Class IE cytochrome C signature 249 261 2.4E-12 T 19-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 ALIDE2_RS01965 dc8b9ad1f96ccf653a33d5773d8d94d8 278 PRINTS PR00607 Class IE cytochrome C signature 221 231 2.4E-12 T 19-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 ALIDE2_RS01965 dc8b9ad1f96ccf653a33d5773d8d94d8 278 PRINTS PR00607 Class IE cytochrome C signature 263 274 2.4E-12 T 19-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 ALIDE2_RS01965 dc8b9ad1f96ccf653a33d5773d8d94d8 278 SUPERFAMILY SSF46626 77 152 5.49E-15 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS01965 dc8b9ad1f96ccf653a33d5773d8d94d8 278 SUPERFAMILY SSF46626 201 275 2.25E-17 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS01965 dc8b9ad1f96ccf653a33d5773d8d94d8 278 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 77 150 1.1E-15 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS01965 dc8b9ad1f96ccf653a33d5773d8d94d8 278 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 201 273 2.6E-18 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS01965 dc8b9ad1f96ccf653a33d5773d8d94d8 278 Gene3D G3DSA:1.10.760.10 200 275 4.0E-29 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS01965 dc8b9ad1f96ccf653a33d5773d8d94d8 278 Gene3D G3DSA:1.10.760.10 77 152 1.5E-27 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS08005 b76e3d4675b4cc3d0a9de2c5d78f7e9c 156 PANTHER PTHR41294 2 156 4.5E-37 T 19-04-2016 ALIDE2_RS08005 b76e3d4675b4cc3d0a9de2c5d78f7e9c 156 PANTHER PTHR41294:SF1 2 156 4.5E-37 T 19-04-2016 ALIDE2_RS08005 b76e3d4675b4cc3d0a9de2c5d78f7e9c 156 SUPERFAMILY SSF54593 2 119 3.89E-20 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS08005 b76e3d4675b4cc3d0a9de2c5d78f7e9c 156 Gene3D G3DSA:3.10.180.10 5 114 1.3E-17 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS13225 7f30b025a376c142191c75e874ca6f62 293 Gene3D G3DSA:2.60.120.10 15 245 5.9E-61 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS13225 7f30b025a376c142191c75e874ca6f62 293 PANTHER PTHR13903 8 289 5.7E-116 T 19-04-2016 IPR012093 Pirin ALIDE2_RS13225 7f30b025a376c142191c75e874ca6f62 293 SUPERFAMILY SSF51182 16 282 2.32E-70 T 19-04-2016 IPR011051 RmlC-like cupin domain ALIDE2_RS13225 7f30b025a376c142191c75e874ca6f62 293 PIRSF PIRSF006232 1 281 2.8E-73 T 19-04-2016 IPR012093 Pirin ALIDE2_RS13225 7f30b025a376c142191c75e874ca6f62 293 Pfam PF02678 Pirin 20 120 2.3E-29 T 19-04-2016 IPR003829 Pirin, N-terminal domain ALIDE2_RS13225 7f30b025a376c142191c75e874ca6f62 293 Pfam PF05726 Pirin C-terminal cupin domain 172 269 1.4E-16 T 19-04-2016 IPR008778 Pirin, C-terminal domain ALIDE2_RS13225 7f30b025a376c142191c75e874ca6f62 293 PANTHER PTHR13903:SF4 8 289 5.7E-116 T 19-04-2016 ALIDE2_RS04820 9516063188c40743056c8affc734e995 407 SUPERFAMILY SSF111369 106 302 8.11E-13 T 19-04-2016 ALIDE2_RS04820 9516063188c40743056c8affc734e995 407 Gene3D G3DSA:2.40.50.100 214 245 1.9E-11 T 19-04-2016 ALIDE2_RS04820 9516063188c40743056c8affc734e995 407 Gene3D G3DSA:2.40.50.100 107 139 1.9E-11 T 19-04-2016 ALIDE2_RS04820 9516063188c40743056c8affc734e995 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 106 302 2.2E-15 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS04820 9516063188c40743056c8affc734e995 407 PANTHER PTHR30469 104 401 2.9E-26 T 19-04-2016 ALIDE2_RS04820 9516063188c40743056c8affc734e995 407 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 104 401 2.4E-32 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ALIDE2_RS17290 22b0491466827f3c8cc2fd8670a8c0ce 553 Gene3D G3DSA:3.40.50.300 8 105 1.3E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17290 22b0491466827f3c8cc2fd8670a8c0ce 553 Gene3D G3DSA:3.40.50.300 137 287 1.3E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17290 22b0491466827f3c8cc2fd8670a8c0ce 553 Gene3D G3DSA:3.40.50.300 321 536 8.0E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17290 22b0491466827f3c8cc2fd8670a8c0ce 553 SUPERFAMILY SSF52540 19 242 5.24E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17290 22b0491466827f3c8cc2fd8670a8c0ce 553 Pfam PF00005 ABC transporter 339 472 1.3E-24 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS17290 22b0491466827f3c8cc2fd8670a8c0ce 553 Pfam PF00005 ABC transporter 22 190 1.9E-27 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS17290 22b0491466827f3c8cc2fd8670a8c0ce 553 SUPERFAMILY SSF52540 301 523 1.44E-48 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17290 22b0491466827f3c8cc2fd8670a8c0ce 553 Pfam PF12848 ABC transporter 229 305 1.8E-11 T 19-04-2016 IPR032781 ABC-transporter extension domain ALIDE2_RS17290 22b0491466827f3c8cc2fd8670a8c0ce 553 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 552 3.6E-288 T 19-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD ALIDE2_RS17290 22b0491466827f3c8cc2fd8670a8c0ce 553 PANTHER PTHR19211 1 553 0.0 T 19-04-2016 ALIDE2_RS17290 22b0491466827f3c8cc2fd8670a8c0ce 553 PANTHER PTHR19211:SF7 1 553 0.0 T 19-04-2016 ALIDE2_RS17290 22b0491466827f3c8cc2fd8670a8c0ce 553 SMART SM00382 347 525 1.2E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS17290 22b0491466827f3c8cc2fd8670a8c0ce 553 SMART SM00382 31 241 1.4E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS17290 22b0491466827f3c8cc2fd8670a8c0ce 553 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS14025 5d09c151ea3bd82a89e43a59c5289d29 141 PANTHER PTHR30204 6 83 2.8E-27 T 19-04-2016 ALIDE2_RS14025 5d09c151ea3bd82a89e43a59c5289d29 141 PANTHER PTHR30204:SF15 6 83 2.8E-27 T 19-04-2016 ALIDE2_RS14025 5d09c151ea3bd82a89e43a59c5289d29 141 SUPERFAMILY SSF46955 12 88 3.57E-18 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS14025 5d09c151ea3bd82a89e43a59c5289d29 141 SMART SM00422 14 84 7.1E-9 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS14025 5d09c151ea3bd82a89e43a59c5289d29 141 Gene3D G3DSA:1.10.1660.10 11 82 6.2E-18 T 19-04-2016 ALIDE2_RS14025 5d09c151ea3bd82a89e43a59c5289d29 141 Pfam PF13411 MerR HTH family regulatory protein 14 83 7.6E-23 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS19430 3d774e4bf9b2701de174b591f6e09c76 259 Pfam PF07702 UTRA domain 100 238 1.6E-14 T 19-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ALIDE2_RS19430 3d774e4bf9b2701de174b591f6e09c76 259 Gene3D G3DSA:3.40.1410.10 98 243 6.8E-22 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ALIDE2_RS19430 3d774e4bf9b2701de174b591f6e09c76 259 SUPERFAMILY SSF46785 8 79 6.9E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS19430 3d774e4bf9b2701de174b591f6e09c76 259 PANTHER PTHR11751 179 198 5.9E-15 T 19-04-2016 ALIDE2_RS19430 3d774e4bf9b2701de174b591f6e09c76 259 PANTHER PTHR11751 20 82 5.9E-15 T 19-04-2016 ALIDE2_RS19430 3d774e4bf9b2701de174b591f6e09c76 259 SUPERFAMILY SSF64288 63 244 6.6E-28 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ALIDE2_RS19430 3d774e4bf9b2701de174b591f6e09c76 259 Gene3D G3DSA:1.10.10.10 12 80 5.3E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS19430 3d774e4bf9b2701de174b591f6e09c76 259 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 1.3E-16 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS19430 3d774e4bf9b2701de174b591f6e09c76 259 SMART SM00345 16 75 3.0E-16 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS19430 3d774e4bf9b2701de174b591f6e09c76 259 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.1E-8 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS19430 3d774e4bf9b2701de174b591f6e09c76 259 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.1E-8 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS19430 3d774e4bf9b2701de174b591f6e09c76 259 SMART SM00866 96 238 1.5E-14 T 19-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ALIDE2_RS04890 d150b80e1dc7d12628547b9ef12ab28e 118 Gene3D G3DSA:3.30.70.830 8 116 8.2E-31 T 19-04-2016 ALIDE2_RS04890 d150b80e1dc7d12628547b9ef12ab28e 118 Pfam PF03091 CutA1 divalent ion tolerance protein 20 114 1.2E-26 T 19-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 ALIDE2_RS04890 d150b80e1dc7d12628547b9ef12ab28e 118 SUPERFAMILY SSF54913 17 116 4.82E-29 T 19-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta ALIDE2_RS04890 d150b80e1dc7d12628547b9ef12ab28e 118 PANTHER PTHR23419 15 116 4.1E-20 T 19-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 ALIDE2_RS03050 87b8dd45f84511b1010c66bf9066f940 567 PANTHER PTHR30258 2 567 1.6E-193 T 19-04-2016 ALIDE2_RS03050 87b8dd45f84511b1010c66bf9066f940 567 Gene3D G3DSA:3.30.450.90 165 290 3.2E-46 T 19-04-2016 ALIDE2_RS03050 87b8dd45f84511b1010c66bf9066f940 567 SUPERFAMILY SSF160246 10 152 1.91E-23 T 19-04-2016 ALIDE2_RS03050 87b8dd45f84511b1010c66bf9066f940 567 PANTHER PTHR30258:SF2 2 567 1.6E-193 T 19-04-2016 ALIDE2_RS03050 87b8dd45f84511b1010c66bf9066f940 567 SUPERFAMILY SSF52540 174 562 2.09E-97 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03050 87b8dd45f84511b1010c66bf9066f940 567 Pfam PF00437 Type II/IV secretion system protein 192 457 5.5E-79 T 19-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ALIDE2_RS03050 87b8dd45f84511b1010c66bf9066f940 567 Gene3D G3DSA:3.40.50.300 293 565 1.2E-92 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03050 87b8dd45f84511b1010c66bf9066f940 567 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 48 154 4.7E-14 T 19-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 ALIDE2_RS03050 87b8dd45f84511b1010c66bf9066f940 567 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 385 399 - T 19-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ALIDE2_RS06880 d31ae090f382528acea7c879ee8b3ee6 401 PANTHER PTHR23534 16 401 4.7E-75 T 19-04-2016 ALIDE2_RS06880 d31ae090f382528acea7c879ee8b3ee6 401 SUPERFAMILY SSF103473 11 392 7.06E-40 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS06880 d31ae090f382528acea7c879ee8b3ee6 401 Pfam PF07690 Major Facilitator Superfamily 22 194 6.4E-12 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS06880 d31ae090f382528acea7c879ee8b3ee6 401 Pfam PF07690 Major Facilitator Superfamily 223 389 8.8E-13 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS06880 d31ae090f382528acea7c879ee8b3ee6 401 Gene3D G3DSA:1.20.1250.20 17 194 2.3E-11 T 19-04-2016 ALIDE2_RS06880 d31ae090f382528acea7c879ee8b3ee6 401 Gene3D G3DSA:1.20.1250.20 214 399 8.8E-17 T 19-04-2016 ALIDE2_RS09235 2eaa6cd1524107e323d6a88a9f8c8531 285 Pfam PF13452 N-terminal half of MaoC dehydratase 40 137 1.1E-9 T 19-04-2016 ALIDE2_RS09235 2eaa6cd1524107e323d6a88a9f8c8531 285 SUPERFAMILY SSF54637 10 159 1.36E-47 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS09235 2eaa6cd1524107e323d6a88a9f8c8531 285 PANTHER PTHR13078 1 285 4.9E-120 T 19-04-2016 ALIDE2_RS09235 2eaa6cd1524107e323d6a88a9f8c8531 285 SUPERFAMILY SSF54637 162 278 8.38E-31 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS09235 2eaa6cd1524107e323d6a88a9f8c8531 285 Pfam PF01575 MaoC like domain 164 275 5.2E-25 T 19-04-2016 IPR002539 MaoC-like domain ALIDE2_RS09235 2eaa6cd1524107e323d6a88a9f8c8531 285 Gene3D G3DSA:3.10.129.10 1 144 1.2E-52 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS09235 2eaa6cd1524107e323d6a88a9f8c8531 285 Gene3D G3DSA:3.10.129.10 145 283 2.7E-43 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS09235 2eaa6cd1524107e323d6a88a9f8c8531 285 PANTHER PTHR13078:SF55 1 285 4.9E-120 T 19-04-2016 ALIDE2_RS06810 293986673ab488aa7b6e15b1f6ef4596 178 PANTHER PTHR41247 7 178 4.7E-31 T 19-04-2016 ALIDE2_RS06810 293986673ab488aa7b6e15b1f6ef4596 178 Pfam PF05573 NosL 21 166 3.3E-55 T 19-04-2016 IPR008719 Nitrous oxide reductase accessory protein NosL ALIDE2_RS06810 293986673ab488aa7b6e15b1f6ef4596 178 SUPERFAMILY SSF160387 60 177 1.23E-36 T 19-04-2016 ALIDE2_RS07705 7e47ccc1c8aae553a8f3ab4658210d10 161 PANTHER PTHR23513 12 140 2.6E-16 T 19-04-2016 ALIDE2_RS07705 7e47ccc1c8aae553a8f3ab4658210d10 161 PANTHER PTHR23513:SF7 12 140 2.6E-16 T 19-04-2016 ALIDE2_RS07705 7e47ccc1c8aae553a8f3ab4658210d10 161 SUPERFAMILY SSF103473 29 148 1.96E-5 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS07705 7e47ccc1c8aae553a8f3ab4658210d10 161 Pfam PF05977 Transmembrane secretion effector 25 122 5.4E-22 T 19-04-2016 IPR010290 Transmembrane secretion effector ALIDE2_RS07705 7e47ccc1c8aae553a8f3ab4658210d10 161 Gene3D G3DSA:1.20.1250.20 28 147 4.3E-4 T 19-04-2016 ALIDE2_RS20035 073ef23f5cf65af6ce888d104aa4d6a3 321 PANTHER PTHR30349:SF16 1 309 2.7E-86 T 19-04-2016 ALIDE2_RS20035 073ef23f5cf65af6ce888d104aa4d6a3 321 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 44 317 1.1E-73 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS20035 073ef23f5cf65af6ce888d104aa4d6a3 321 PANTHER PTHR30349 1 309 2.7E-86 T 19-04-2016 ALIDE2_RS20035 073ef23f5cf65af6ce888d104aa4d6a3 321 PIRSF PIRSF017082 1 321 5.5E-77 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS20035 073ef23f5cf65af6ce888d104aa4d6a3 321 SUPERFAMILY SSF53850 110 283 6.51E-10 T 19-04-2016 ALIDE2_RS04335 ed6f1c4249d75dbd586e4932a77b3f6d 251 Gene3D G3DSA:2.60.440.10 172 250 8.6E-21 T 19-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain ALIDE2_RS04335 ed6f1c4249d75dbd586e4932a77b3f6d 251 PANTHER PTHR39455:SF1 1 251 5.5E-55 T 19-04-2016 ALIDE2_RS04335 ed6f1c4249d75dbd586e4932a77b3f6d 251 PANTHER PTHR39455 1 251 5.5E-55 T 19-04-2016 ALIDE2_RS04335 ed6f1c4249d75dbd586e4932a77b3f6d 251 Gene3D G3DSA:1.10.3900.10 10 171 3.1E-64 T 19-04-2016 ALIDE2_RS04335 ed6f1c4249d75dbd586e4932a77b3f6d 251 SUPERFAMILY SSF160950 2 250 3.79E-86 T 19-04-2016 ALIDE2_RS04335 ed6f1c4249d75dbd586e4932a77b3f6d 251 Pfam PF07072 Protein of unknown function (DUF1342) 16 226 1.3E-79 T 19-04-2016 IPR009777 Cell division protein ZapD ALIDE2_RS04335 ed6f1c4249d75dbd586e4932a77b3f6d 251 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 250 31.721 T 19-04-2016 IPR009777 Cell division protein ZapD ALIDE2_RS17650 4ae0be520b71c95361f1c0e0fcc2cf0f 256 PANTHER PTHR18966 35 254 2.1E-27 T 19-04-2016 ALIDE2_RS17650 4ae0be520b71c95361f1c0e0fcc2cf0f 256 Gene3D G3DSA:3.40.190.10 112 209 1.2E-18 T 19-04-2016 ALIDE2_RS17650 4ae0be520b71c95361f1c0e0fcc2cf0f 256 Gene3D G3DSA:3.40.190.10 217 255 3.1E-32 T 19-04-2016 ALIDE2_RS17650 4ae0be520b71c95361f1c0e0fcc2cf0f 256 Gene3D G3DSA:3.40.190.10 32 111 3.1E-32 T 19-04-2016 ALIDE2_RS17650 4ae0be520b71c95361f1c0e0fcc2cf0f 256 SMART SM00062 33 256 2.6E-49 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS17650 4ae0be520b71c95361f1c0e0fcc2cf0f 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 255 5.0E-54 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS17650 4ae0be520b71c95361f1c0e0fcc2cf0f 256 PANTHER PTHR18966:SF152 35 254 2.1E-27 T 19-04-2016 ALIDE2_RS17650 4ae0be520b71c95361f1c0e0fcc2cf0f 256 SUPERFAMILY SSF53850 11 255 5.2E-56 T 19-04-2016 ALIDE2_RS12950 9d8a2643d93f0cc11cf9096ac1bf8d69 426 PANTHER PTHR11601 21 426 7.9E-145 T 19-04-2016 ALIDE2_RS12950 9d8a2643d93f0cc11cf9096ac1bf8d69 426 Pfam PF00266 Aminotransferase class-V 41 414 2.2E-126 T 19-04-2016 IPR000192 Aminotransferase class V domain ALIDE2_RS12950 9d8a2643d93f0cc11cf9096ac1bf8d69 426 SUPERFAMILY SSF53383 19 423 1.46E-114 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS12950 9d8a2643d93f0cc11cf9096ac1bf8d69 426 PANTHER PTHR11601:SF17 21 426 7.9E-145 T 19-04-2016 ALIDE2_RS12950 9d8a2643d93f0cc11cf9096ac1bf8d69 426 Gene3D G3DSA:3.90.1150.10 304 420 1.6E-31 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS12950 9d8a2643d93f0cc11cf9096ac1bf8d69 426 Gene3D G3DSA:3.40.640.10 52 303 5.8E-77 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS12950 9d8a2643d93f0cc11cf9096ac1bf8d69 426 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 237 256 - T 19-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ALIDE2_RS12950 9d8a2643d93f0cc11cf9096ac1bf8d69 426 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 22 426 7.8E-147 T 19-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 ALIDE2_RS21385 70cad2a58ddf536f5779aab031e2db3f 304 SUPERFAMILY SSF53098 122 284 4.7E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS21385 70cad2a58ddf536f5779aab031e2db3f 304 PANTHER PTHR32552 4 292 8.6E-72 T 19-04-2016 ALIDE2_RS21385 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF00665 Integrase core domain 128 243 1.2E-28 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS21385 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF13276 HTH-like domain 48 103 1.2E-15 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS21385 70cad2a58ddf536f5779aab031e2db3f 304 Gene3D G3DSA:3.30.420.10 122 283 6.1E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS04785 70cad2a58ddf536f5779aab031e2db3f 304 SUPERFAMILY SSF53098 122 284 4.7E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS04785 70cad2a58ddf536f5779aab031e2db3f 304 PANTHER PTHR32552 4 292 8.6E-72 T 19-04-2016 ALIDE2_RS04785 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF00665 Integrase core domain 128 243 1.2E-28 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS04785 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF13276 HTH-like domain 48 103 1.2E-15 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS04785 70cad2a58ddf536f5779aab031e2db3f 304 Gene3D G3DSA:3.30.420.10 122 283 6.1E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS00045 70cad2a58ddf536f5779aab031e2db3f 304 SUPERFAMILY SSF53098 122 284 4.7E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS00045 70cad2a58ddf536f5779aab031e2db3f 304 PANTHER PTHR32552 4 292 8.6E-72 T 19-04-2016 ALIDE2_RS00045 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF00665 Integrase core domain 128 243 1.2E-28 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS00045 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF13276 HTH-like domain 48 103 1.2E-15 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS00045 70cad2a58ddf536f5779aab031e2db3f 304 Gene3D G3DSA:3.30.420.10 122 283 6.1E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS17500 70cad2a58ddf536f5779aab031e2db3f 304 SUPERFAMILY SSF53098 122 284 4.7E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS17500 70cad2a58ddf536f5779aab031e2db3f 304 PANTHER PTHR32552 4 292 8.6E-72 T 19-04-2016 ALIDE2_RS17500 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF00665 Integrase core domain 128 243 1.2E-28 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS17500 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF13276 HTH-like domain 48 103 1.2E-15 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS17500 70cad2a58ddf536f5779aab031e2db3f 304 Gene3D G3DSA:3.30.420.10 122 283 6.1E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS10825 70cad2a58ddf536f5779aab031e2db3f 304 SUPERFAMILY SSF53098 122 284 4.7E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS10825 70cad2a58ddf536f5779aab031e2db3f 304 PANTHER PTHR32552 4 292 8.6E-72 T 19-04-2016 ALIDE2_RS10825 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF00665 Integrase core domain 128 243 1.2E-28 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS10825 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF13276 HTH-like domain 48 103 1.2E-15 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS10825 70cad2a58ddf536f5779aab031e2db3f 304 Gene3D G3DSA:3.30.420.10 122 283 6.1E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS04415 70cad2a58ddf536f5779aab031e2db3f 304 SUPERFAMILY SSF53098 122 284 4.7E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS04415 70cad2a58ddf536f5779aab031e2db3f 304 PANTHER PTHR32552 4 292 8.6E-72 T 19-04-2016 ALIDE2_RS04415 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF00665 Integrase core domain 128 243 1.2E-28 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS04415 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF13276 HTH-like domain 48 103 1.2E-15 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS04415 70cad2a58ddf536f5779aab031e2db3f 304 Gene3D G3DSA:3.30.420.10 122 283 6.1E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS10355 70cad2a58ddf536f5779aab031e2db3f 304 SUPERFAMILY SSF53098 122 284 4.7E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS10355 70cad2a58ddf536f5779aab031e2db3f 304 PANTHER PTHR32552 4 292 8.6E-72 T 19-04-2016 ALIDE2_RS10355 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF00665 Integrase core domain 128 243 1.2E-28 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS10355 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF13276 HTH-like domain 48 103 1.2E-15 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS10355 70cad2a58ddf536f5779aab031e2db3f 304 Gene3D G3DSA:3.30.420.10 122 283 6.1E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS13680 70cad2a58ddf536f5779aab031e2db3f 304 SUPERFAMILY SSF53098 122 284 4.7E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS13680 70cad2a58ddf536f5779aab031e2db3f 304 PANTHER PTHR32552 4 292 8.6E-72 T 19-04-2016 ALIDE2_RS13680 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF00665 Integrase core domain 128 243 1.2E-28 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS13680 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF13276 HTH-like domain 48 103 1.2E-15 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS13680 70cad2a58ddf536f5779aab031e2db3f 304 Gene3D G3DSA:3.30.420.10 122 283 6.1E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS20420 70cad2a58ddf536f5779aab031e2db3f 304 SUPERFAMILY SSF53098 122 284 4.7E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS20420 70cad2a58ddf536f5779aab031e2db3f 304 PANTHER PTHR32552 4 292 8.6E-72 T 19-04-2016 ALIDE2_RS20420 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF00665 Integrase core domain 128 243 1.2E-28 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS20420 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF13276 HTH-like domain 48 103 1.2E-15 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS20420 70cad2a58ddf536f5779aab031e2db3f 304 Gene3D G3DSA:3.30.420.10 122 283 6.1E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS21750 70cad2a58ddf536f5779aab031e2db3f 304 SUPERFAMILY SSF53098 122 284 4.7E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS21750 70cad2a58ddf536f5779aab031e2db3f 304 PANTHER PTHR32552 4 292 8.6E-72 T 19-04-2016 ALIDE2_RS21750 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF00665 Integrase core domain 128 243 1.2E-28 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS21750 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF13276 HTH-like domain 48 103 1.2E-15 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS21750 70cad2a58ddf536f5779aab031e2db3f 304 Gene3D G3DSA:3.30.420.10 122 283 6.1E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS15170 70cad2a58ddf536f5779aab031e2db3f 304 SUPERFAMILY SSF53098 122 284 4.7E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS15170 70cad2a58ddf536f5779aab031e2db3f 304 PANTHER PTHR32552 4 292 8.6E-72 T 19-04-2016 ALIDE2_RS15170 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF00665 Integrase core domain 128 243 1.2E-28 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS15170 70cad2a58ddf536f5779aab031e2db3f 304 Pfam PF13276 HTH-like domain 48 103 1.2E-15 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS15170 70cad2a58ddf536f5779aab031e2db3f 304 Gene3D G3DSA:3.30.420.10 122 283 6.1E-37 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS15690 668c4d1e1ec6eaf4eb56b0809930d8d0 258 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 169 257 1.5E-25 T 19-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 ALIDE2_RS15690 668c4d1e1ec6eaf4eb56b0809930d8d0 258 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 257 42.758 T 19-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 ALIDE2_RS15690 668c4d1e1ec6eaf4eb56b0809930d8d0 258 Gene3D G3DSA:3.60.15.10 4 257 5.0E-87 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS15690 668c4d1e1ec6eaf4eb56b0809930d8d0 258 PANTHER PTHR11935:SF7 1 258 2.0E-87 T 19-04-2016 ALIDE2_RS15690 668c4d1e1ec6eaf4eb56b0809930d8d0 258 SUPERFAMILY SSF56281 1 257 7.7E-69 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS15690 668c4d1e1ec6eaf4eb56b0809930d8d0 258 SMART SM00849 11 168 1.5E-34 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS15690 668c4d1e1ec6eaf4eb56b0809930d8d0 258 Pfam PF00753 Metallo-beta-lactamase superfamily 13 168 1.8E-17 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS15690 668c4d1e1ec6eaf4eb56b0809930d8d0 258 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 49 69 - T 19-04-2016 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 ALIDE2_RS15690 668c4d1e1ec6eaf4eb56b0809930d8d0 258 PIRSF PIRSF005457 1 257 1.9E-99 T 19-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 ALIDE2_RS15690 668c4d1e1ec6eaf4eb56b0809930d8d0 258 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 5 257 1.5E-99 T 19-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 ALIDE2_RS15690 668c4d1e1ec6eaf4eb56b0809930d8d0 258 PANTHER PTHR11935 1 258 2.0E-87 T 19-04-2016 ALIDE2_RS22730 e1ed9c9e58d71ff3a0cd8ad556d352c3 1362 Pfam PF13502 AsmA-like C-terminal region 1086 1338 1.7E-69 T 19-04-2016 IPR032712 AsmA-like, C-terminal ALIDE2_RS22730 e1ed9c9e58d71ff3a0cd8ad556d352c3 1362 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 26 1344 3.6E-213 T 19-04-2016 IPR011836 Conserved hypothetical protein CHP02099 ALIDE2_RS22730 e1ed9c9e58d71ff3a0cd8ad556d352c3 1362 PANTHER PTHR38690 10 1357 1.0E-128 T 19-04-2016 ALIDE2_RS22730 e1ed9c9e58d71ff3a0cd8ad556d352c3 1362 Pfam PF13116 Protein of unknown function 541 828 1.3E-45 T 19-04-2016 IPR025263 Domain of unknown function DUF3971 ALIDE2_RS02985 0b1551b1607f567a275798ec16ab0d04 247 SMART SM00563 76 191 2.0E-25 T 19-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ALIDE2_RS02985 0b1551b1607f567a275798ec16ab0d04 247 Gene3D G3DSA:3.40.1130.10 41 226 8.5E-22 T 19-04-2016 ALIDE2_RS02985 0b1551b1607f567a275798ec16ab0d04 247 SUPERFAMILY SSF69593 6 243 1.16E-40 T 19-04-2016 ALIDE2_RS02985 0b1551b1607f567a275798ec16ab0d04 247 Pfam PF01553 Acyltransferase 62 188 4.1E-22 T 19-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ALIDE2_RS02985 0b1551b1607f567a275798ec16ab0d04 247 PANTHER PTHR10434 3 246 1.2E-51 T 19-04-2016 ALIDE2_RS17635 9ea1bef9e81f7c83da0aba0b82dcdac5 350 Pfam PF00962 Adenosine/AMP deaminase 20 336 3.0E-68 T 19-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 ALIDE2_RS17635 9ea1bef9e81f7c83da0aba0b82dcdac5 350 Hamap MF_01962 Adenine deaminase. 15 328 83.763 T 19-04-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 ALIDE2_RS17635 9ea1bef9e81f7c83da0aba0b82dcdac5 350 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 20 335 8.5E-112 T 19-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 ALIDE2_RS17635 9ea1bef9e81f7c83da0aba0b82dcdac5 350 PANTHER PTHR11409:SF41 9 348 4.4E-156 T 19-04-2016 ALIDE2_RS17635 9ea1bef9e81f7c83da0aba0b82dcdac5 350 SUPERFAMILY SSF51556 16 342 4.38E-82 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS17635 9ea1bef9e81f7c83da0aba0b82dcdac5 350 PANTHER PTHR11409 9 348 4.4E-156 T 19-04-2016 ALIDE2_RS17635 9ea1bef9e81f7c83da0aba0b82dcdac5 350 Gene3D G3DSA:3.20.20.140 17 342 4.3E-101 T 19-04-2016 ALIDE2_RS05070 653fff612b23c07def786d942c1728f5 524 SUPERFAMILY SSF51905 347 437 1.3E-71 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS05070 653fff612b23c07def786d942c1728f5 524 SUPERFAMILY SSF51905 3 246 1.3E-71 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS05070 653fff612b23c07def786d942c1728f5 524 Gene3D G3DSA:1.20.58.100 408 510 4.5E-31 T 19-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 ALIDE2_RS05070 653fff612b23c07def786d942c1728f5 524 PANTHER PTHR11632 1 524 2.0E-245 T 19-04-2016 ALIDE2_RS05070 653fff612b23c07def786d942c1728f5 524 Pfam PF00890 FAD binding domain 7 383 5.2E-100 T 19-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain ALIDE2_RS05070 653fff612b23c07def786d942c1728f5 524 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 5 509 9.7E-190 T 19-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 ALIDE2_RS05070 653fff612b23c07def786d942c1728f5 524 Pfam PF02910 Fumarate reductase flavoprotein C-term 430 510 6.8E-13 T 19-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 ALIDE2_RS05070 653fff612b23c07def786d942c1728f5 524 PANTHER PTHR11632:SF27 1 524 2.0E-245 T 19-04-2016 ALIDE2_RS05070 653fff612b23c07def786d942c1728f5 524 SUPERFAMILY SSF56425 229 344 1.64E-42 T 19-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain ALIDE2_RS05070 653fff612b23c07def786d942c1728f5 524 Gene3D G3DSA:3.90.700.10 235 339 4.7E-39 T 19-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain ALIDE2_RS05070 653fff612b23c07def786d942c1728f5 524 Gene3D G3DSA:3.50.50.60 2 234 1.2E-101 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS05070 653fff612b23c07def786d942c1728f5 524 Gene3D G3DSA:3.50.50.60 340 399 1.2E-101 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS05070 653fff612b23c07def786d942c1728f5 524 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.1E-10 T 19-04-2016 ALIDE2_RS05070 653fff612b23c07def786d942c1728f5 524 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 4.1E-10 T 19-04-2016 ALIDE2_RS05070 653fff612b23c07def786d942c1728f5 524 SUPERFAMILY SSF46977 414 511 5.63E-29 T 19-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 ALIDE2_RS08440 df1156e226094eb79d0a78a8ad30cb60 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 121 3.9E-21 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS08440 df1156e226094eb79d0a78a8ad30cb60 385 PANTHER PTHR10909 10 385 7.7E-136 T 19-04-2016 ALIDE2_RS08440 df1156e226094eb79d0a78a8ad30cb60 385 PANTHER PTHR10909:SF305 10 385 7.7E-136 T 19-04-2016 ALIDE2_RS08440 df1156e226094eb79d0a78a8ad30cb60 385 SUPERFAMILY SSF56645 9 246 3.8E-67 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS08440 df1156e226094eb79d0a78a8ad30cb60 385 Gene3D G3DSA:1.20.140.10 224 384 2.6E-62 T 19-04-2016 ALIDE2_RS08440 df1156e226094eb79d0a78a8ad30cb60 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 2.3E-45 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS08440 df1156e226094eb79d0a78a8ad30cb60 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS08440 df1156e226094eb79d0a78a8ad30cb60 385 SUPERFAMILY SSF47203 233 383 6.6E-53 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS08440 df1156e226094eb79d0a78a8ad30cb60 385 Gene3D G3DSA:2.40.110.10 125 223 2.3E-35 T 19-04-2016 ALIDE2_RS08440 df1156e226094eb79d0a78a8ad30cb60 385 Gene3D G3DSA:1.10.540.10 8 122 6.2E-27 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS08440 df1156e226094eb79d0a78a8ad30cb60 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 222 4.6E-23 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS08440 df1156e226094eb79d0a78a8ad30cb60 385 PIRSF PIRSF016578 3 385 2.2E-16 T 19-04-2016 ALIDE2_RS16560 213ec4112a2d92c2596a64100d8e3cd9 175 Pfam PF01464 Transglycosylase SLT domain 21 122 1.1E-24 T 19-04-2016 IPR008258 Transglycosylase SLT domain 1 ALIDE2_RS16560 213ec4112a2d92c2596a64100d8e3cd9 175 PANTHER PTHR11407 1 74 1.3E-13 T 19-04-2016 ALIDE2_RS16560 213ec4112a2d92c2596a64100d8e3cd9 175 SUPERFAMILY SSF53955 17 142 4.27E-36 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS16560 213ec4112a2d92c2596a64100d8e3cd9 175 Gene3D G3DSA:1.10.530.10 18 124 2.8E-21 T 19-04-2016 ALIDE2_RS16560 213ec4112a2d92c2596a64100d8e3cd9 175 PANTHER PTHR11407:SF34 1 74 1.3E-13 T 19-04-2016 ALIDE2_RS19310 13ddfba21b44c56b4947044e10fc1f28 354 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS19310 13ddfba21b44c56b4947044e10fc1f28 354 PANTHER PTHR24220:SF282 4 250 2.0E-115 T 19-04-2016 ALIDE2_RS19310 13ddfba21b44c56b4947044e10fc1f28 354 SMART SM00382 29 214 2.0E-16 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS19310 13ddfba21b44c56b4947044e10fc1f28 354 SUPERFAMILY SSF50331 259 352 8.5E-12 T 19-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal ALIDE2_RS19310 13ddfba21b44c56b4947044e10fc1f28 354 Gene3D G3DSA:3.40.50.300 2 237 1.4E-67 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19310 13ddfba21b44c56b4947044e10fc1f28 354 Pfam PF00005 ABC transporter 21 164 2.4E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS19310 13ddfba21b44c56b4947044e10fc1f28 354 Pfam PF08402 TOBE domain 282 351 8.5E-7 T 19-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 ALIDE2_RS19310 13ddfba21b44c56b4947044e10fc1f28 354 PANTHER PTHR24220 4 250 2.0E-115 T 19-04-2016 ALIDE2_RS19310 13ddfba21b44c56b4947044e10fc1f28 354 SUPERFAMILY SSF52540 3 239 8.12E-77 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 PANTHER PTHR24093 13 908 0.0 T 19-04-2016 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 SUPERFAMILY SSF81660 342 545 6.1E-53 T 19-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 Gene3D G3DSA:2.70.150.10 24 66 1.7E-38 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 Gene3D G3DSA:2.70.150.10 120 233 1.7E-38 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 SUPERFAMILY SSF81653 124 232 3.14E-28 T 19-04-2016 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 SMART SM00831 13 87 1.3E-33 T 19-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 337 343 - T 19-04-2016 IPR018303 P-type ATPase, phosphorylation site ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 Gene3D G3DSA:3.40.1110.10 325 549 1.9E-56 T 19-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 Pfam PF00122 E1-E2 ATPase 93 326 4.9E-63 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 Pfam PF00690 Cation transporter/ATPase, N-terminus 14 81 1.9E-18 T 19-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 SUPERFAMILY SSF56784 333 353 3.66E-58 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 SUPERFAMILY SSF56784 497 747 3.66E-58 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 Pfam PF00689 Cation transporting ATPase, C-terminus 728 899 2.7E-44 T 19-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 Gene3D G3DSA:1.20.1110.10 67 119 7.4E-110 T 19-04-2016 IPR023298 P-type ATPase, transmembrane domain ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 Gene3D G3DSA:1.20.1110.10 612 903 7.4E-110 T 19-04-2016 IPR023298 P-type ATPase, transmembrane domain ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 542 553 4.99E-40 T 19-04-2016 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 667 679 4.99E-40 T 19-04-2016 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 643 662 4.99E-40 T 19-04-2016 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 172 186 4.99E-40 T 19-04-2016 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 335 349 4.99E-40 T 19-04-2016 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 564 574 4.99E-40 T 19-04-2016 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 Pfam PF00702 haloacid dehalogenase-like hydrolase 332 657 6.8E-21 T 19-04-2016 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 SUPERFAMILY SSF81665 693 905 1.83E-124 T 19-04-2016 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 SUPERFAMILY SSF81665 12 125 1.83E-124 T 19-04-2016 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 SUPERFAMILY SSF81665 235 329 1.83E-124 T 19-04-2016 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 94 356 6.0E-42 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 610 733 6.3E-34 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 328 349 1.75E-15 T 19-04-2016 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 466 484 1.75E-15 T 19-04-2016 ALIDE2_RS10570 19c558387fd87b981f45dcd1fa26d191 914 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 255 277 1.75E-15 T 19-04-2016 ALIDE2_RS05550 738fa412354873fe562e7881eae848da 222 SMART SM00345 12 70 2.0E-16 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05550 738fa412354873fe562e7881eae848da 222 PANTHER PTHR11751 7 96 6.2E-27 T 19-04-2016 ALIDE2_RS05550 738fa412354873fe562e7881eae848da 222 SMART SM00895 80 204 4.3E-17 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS05550 738fa412354873fe562e7881eae848da 222 SUPERFAMILY SSF48008 77 209 2.62E-23 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS05550 738fa412354873fe562e7881eae848da 222 Gene3D G3DSA:1.10.10.10 6 72 1.1E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05550 738fa412354873fe562e7881eae848da 222 Pfam PF07729 FCD domain 81 203 7.5E-27 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS05550 738fa412354873fe562e7881eae848da 222 Pfam PF15575 Immunity protein 49 99 214 3.0E-6 T 19-04-2016 IPR029074 Immunity protein 49 ALIDE2_RS05550 738fa412354873fe562e7881eae848da 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 70 1.3E-17 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05550 738fa412354873fe562e7881eae848da 222 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 4.5E-6 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05550 738fa412354873fe562e7881eae848da 222 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 4.5E-6 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05550 738fa412354873fe562e7881eae848da 222 SUPERFAMILY SSF46785 7 74 2.51E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05550 738fa412354873fe562e7881eae848da 222 Gene3D G3DSA:1.20.120.530 73 214 2.8E-26 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS06535 77df056d7be6755060dcf89e093ffd15 454 Gene3D G3DSA:3.60.15.10 137 257 7.4E-46 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS06535 77df056d7be6755060dcf89e093ffd15 454 Gene3D G3DSA:3.60.15.10 4 102 7.4E-46 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS06535 77df056d7be6755060dcf89e093ffd15 454 SMART SM00849 15 229 5.5E-19 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS06535 77df056d7be6755060dcf89e093ffd15 454 Pfam PF00753 Metallo-beta-lactamase superfamily 18 77 3.7E-12 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS06535 77df056d7be6755060dcf89e093ffd15 454 Pfam PF10996 Beta-Casp domain 249 369 7.0E-22 T 19-04-2016 IPR022712 Beta-Casp domain ALIDE2_RS06535 77df056d7be6755060dcf89e093ffd15 454 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 383 446 7.8E-11 T 19-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain ALIDE2_RS06535 77df056d7be6755060dcf89e093ffd15 454 PANTHER PTHR11203:SF11 124 454 9.8E-92 T 19-04-2016 ALIDE2_RS06535 77df056d7be6755060dcf89e093ffd15 454 PANTHER PTHR11203:SF11 3 107 9.8E-92 T 19-04-2016 ALIDE2_RS06535 77df056d7be6755060dcf89e093ffd15 454 SUPERFAMILY SSF56281 3 454 1.1E-122 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS06535 77df056d7be6755060dcf89e093ffd15 454 SMART SM01027 249 369 8.1E-43 T 19-04-2016 IPR022712 Beta-Casp domain ALIDE2_RS06535 77df056d7be6755060dcf89e093ffd15 454 PANTHER PTHR11203 124 454 9.8E-92 T 19-04-2016 ALIDE2_RS06535 77df056d7be6755060dcf89e093ffd15 454 PANTHER PTHR11203 3 107 9.8E-92 T 19-04-2016 ALIDE2_RS12625 6ae02350e8dc0a30ddc4594535c810cf 81 Pfam PF00364 Biotin-requiring enzyme 19 79 3.2E-14 T 19-04-2016 IPR000089 Biotin/lipoyl attachment ALIDE2_RS12625 6ae02350e8dc0a30ddc4594535c810cf 81 Gene3D G3DSA:2.40.50.100 18 80 7.8E-15 T 19-04-2016 ALIDE2_RS12625 6ae02350e8dc0a30ddc4594535c810cf 81 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 31 60 - T 19-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ALIDE2_RS12625 6ae02350e8dc0a30ddc4594535c810cf 81 SUPERFAMILY SSF51230 15 80 2.22E-14 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS18650 907a07995cde79dbee0547824eaabbbc 263 SUPERFAMILY SSF51161 3 172 1.21E-53 T 19-04-2016 IPR011004 Trimeric LpxA-like ALIDE2_RS18650 907a07995cde79dbee0547824eaabbbc 263 PANTHER PTHR23416 1 173 1.6E-86 T 19-04-2016 ALIDE2_RS18650 907a07995cde79dbee0547824eaabbbc 263 Gene3D G3DSA:1.10.3130.10 1 58 9.3E-26 T 19-04-2016 ALIDE2_RS18650 907a07995cde79dbee0547824eaabbbc 263 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 167 4.0E-71 T 19-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 ALIDE2_RS18650 907a07995cde79dbee0547824eaabbbc 263 PANTHER PTHR23416:SF55 1 173 1.6E-86 T 19-04-2016 ALIDE2_RS18650 907a07995cde79dbee0547824eaabbbc 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 2.8E-6 T 19-04-2016 IPR001451 Hexapeptide repeat ALIDE2_RS18650 907a07995cde79dbee0547824eaabbbc 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 1.8E-6 T 19-04-2016 IPR001451 Hexapeptide repeat ALIDE2_RS18650 907a07995cde79dbee0547824eaabbbc 263 Gene3D G3DSA:2.160.10.10 59 173 2.2E-34 T 19-04-2016 ALIDE2_RS10240 dbd45ac1f399e7586b5372709aeb73c7 572 PANTHER PTHR35149:SF2 1 563 4.0E-67 T 19-04-2016 ALIDE2_RS10240 dbd45ac1f399e7586b5372709aeb73c7 572 PANTHER PTHR35149 1 563 4.0E-67 T 19-04-2016 ALIDE2_RS10240 dbd45ac1f399e7586b5372709aeb73c7 572 Pfam PF03235 Protein of unknown function DUF262 12 231 5.0E-37 T 19-04-2016 IPR004919 Domain of unknown function DUF262 ALIDE2_RS10240 dbd45ac1f399e7586b5372709aeb73c7 572 Pfam PF07510 Protein of unknown function (DUF1524) 433 554 1.6E-21 T 19-04-2016 IPR011089 Domain of unknown function DUF1524 ALIDE2_RS05855 666da557182f5342b4d7849703735b36 123 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 13 120 1.8E-31 T 19-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein ALIDE2_RS05855 666da557182f5342b4d7849703735b36 123 SUPERFAMILY SSF64076 8 121 4.71E-36 T 19-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein ALIDE2_RS05855 666da557182f5342b4d7849703735b36 123 Gene3D G3DSA:3.40.1230.10 1 122 1.8E-41 T 19-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein ALIDE2_RS05855 666da557182f5342b4d7849703735b36 123 PANTHER PTHR21192:SF3 13 121 1.3E-23 T 19-04-2016 ALIDE2_RS05855 666da557182f5342b4d7849703735b36 123 PANTHER PTHR21192 13 121 1.3E-23 T 19-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein ALIDE2_RS15495 e26591eb23a299f8c29bc5fc500006ce 184 PANTHER PTHR21366:SF4 4 176 1.6E-34 T 19-04-2016 ALIDE2_RS15495 e26591eb23a299f8c29bc5fc500006ce 184 SUPERFAMILY SSF54593 4 151 2.15E-31 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS15495 e26591eb23a299f8c29bc5fc500006ce 184 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 117 136 - T 19-04-2016 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 ALIDE2_RS15495 e26591eb23a299f8c29bc5fc500006ce 184 PANTHER PTHR21366 4 176 1.6E-34 T 19-04-2016 ALIDE2_RS15495 e26591eb23a299f8c29bc5fc500006ce 184 Gene3D G3DSA:3.10.180.10 4 175 2.1E-37 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS15495 e26591eb23a299f8c29bc5fc500006ce 184 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 137 9.9E-13 T 19-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ALIDE2_RS22825 3d3caa6929a12d9cc51ee235551b1a0e 268 PANTHER PTHR13832 9 259 8.5E-55 T 19-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 ALIDE2_RS22825 3d3caa6929a12d9cc51ee235551b1a0e 268 Gene3D G3DSA:3.60.40.10 7 250 3.1E-68 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ALIDE2_RS22825 3d3caa6929a12d9cc51ee235551b1a0e 268 PANTHER PTHR13832:SF278 9 259 8.5E-55 T 19-04-2016 ALIDE2_RS22825 3d3caa6929a12d9cc51ee235551b1a0e 268 Pfam PF13672 Protein phosphatase 2C 20 213 1.2E-18 T 19-04-2016 ALIDE2_RS22825 3d3caa6929a12d9cc51ee235551b1a0e 268 SMART SM00332 1 249 1.2E-25 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ALIDE2_RS22825 3d3caa6929a12d9cc51ee235551b1a0e 268 SMART SM00331 15 251 2.0E-34 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ALIDE2_RS22825 3d3caa6929a12d9cc51ee235551b1a0e 268 SUPERFAMILY SSF81606 8 250 3.66E-64 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ALIDE2_RS10050 f41615fc2e2a637feb1fdc1cb7901383 420 Gene3D G3DSA:3.90.1530.10 6 99 2.5E-19 T 19-04-2016 ALIDE2_RS10050 f41615fc2e2a637feb1fdc1cb7901383 420 SMART SM00470 9 95 1.7E-16 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS10050 f41615fc2e2a637feb1fdc1cb7901383 420 PANTHER PTHR13370 311 390 4.6E-20 T 19-04-2016 ALIDE2_RS10050 f41615fc2e2a637feb1fdc1cb7901383 420 Pfam PF01555 DNA methylase 194 387 1.8E-24 T 19-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS10050 f41615fc2e2a637feb1fdc1cb7901383 420 SUPERFAMILY SSF53335 161 394 1.68E-50 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS10050 f41615fc2e2a637feb1fdc1cb7901383 420 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 192 206 6.9E-19 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS10050 f41615fc2e2a637feb1fdc1cb7901383 420 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 372 392 6.9E-19 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS10050 f41615fc2e2a637feb1fdc1cb7901383 420 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 330 347 6.9E-19 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS10050 f41615fc2e2a637feb1fdc1cb7901383 420 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 349 367 6.9E-19 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS10050 f41615fc2e2a637feb1fdc1cb7901383 420 Gene3D G3DSA:3.40.50.150 159 403 1.1E-51 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS10050 f41615fc2e2a637feb1fdc1cb7901383 420 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 196 202 - T 19-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ALIDE2_RS10050 f41615fc2e2a637feb1fdc1cb7901383 420 PIRSF PIRSF036758 6 409 1.0E-156 T 19-04-2016 IPR015840 DNA methyase, ParB domain-containing ALIDE2_RS10050 f41615fc2e2a637feb1fdc1cb7901383 420 SUPERFAMILY SSF110849 7 155 6.28E-37 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS10050 f41615fc2e2a637feb1fdc1cb7901383 420 Pfam PF02195 ParB-like nuclease domain 12 89 6.9E-12 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS04510 37854a5efe48581c7ab7368a3d9de42e 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 321 4.8E-91 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS04510 37854a5efe48581c7ab7368a3d9de42e 327 PANTHER PTHR30349 1 284 4.3E-94 T 19-04-2016 ALIDE2_RS04510 37854a5efe48581c7ab7368a3d9de42e 327 PANTHER PTHR30349:SF16 1 284 4.3E-94 T 19-04-2016 ALIDE2_RS04510 37854a5efe48581c7ab7368a3d9de42e 327 PIRSF PIRSF017082 1 326 1.4E-82 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS04510 37854a5efe48581c7ab7368a3d9de42e 327 SUPERFAMILY SSF53850 81 285 2.11E-13 T 19-04-2016 ALIDE2_RS05490 76520a0e3dc7cc9edd9a7fa562eb49b7 587 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 8.5E-57 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS05490 76520a0e3dc7cc9edd9a7fa562eb49b7 587 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 8.5E-57 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS05490 76520a0e3dc7cc9edd9a7fa562eb49b7 587 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 8.5E-57 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS05490 76520a0e3dc7cc9edd9a7fa562eb49b7 587 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 8.5E-57 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS05490 76520a0e3dc7cc9edd9a7fa562eb49b7 587 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 187 207 8.5E-57 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS05490 76520a0e3dc7cc9edd9a7fa562eb49b7 587 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 8.5E-57 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS05490 76520a0e3dc7cc9edd9a7fa562eb49b7 587 SUPERFAMILY SSF58104 232 513 1.57E-73 T 19-04-2016 ALIDE2_RS05490 76520a0e3dc7cc9edd9a7fa562eb49b7 587 SMART SM00283 265 512 2.5E-94 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS05490 76520a0e3dc7cc9edd9a7fa562eb49b7 587 PANTHER PTHR32089:SF63 161 515 1.7E-157 T 19-04-2016 ALIDE2_RS05490 76520a0e3dc7cc9edd9a7fa562eb49b7 587 SMART SM00304 212 264 1.7E-10 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS05490 76520a0e3dc7cc9edd9a7fa562eb49b7 587 Gene3D G3DSA:1.10.287.950 279 484 9.2E-62 T 19-04-2016 ALIDE2_RS05490 76520a0e3dc7cc9edd9a7fa562eb49b7 587 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 511 6.5E-61 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS05490 76520a0e3dc7cc9edd9a7fa562eb49b7 587 Pfam PF00672 HAMP domain 193 260 4.1E-14 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS05490 76520a0e3dc7cc9edd9a7fa562eb49b7 587 PANTHER PTHR32089 161 515 1.7E-157 T 19-04-2016 ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 PANTHER PTHR22939 65 386 1.9E-109 T 19-04-2016 ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 SUPERFAMILY SSF50494 78 293 4.59E-64 T 19-04-2016 IPR009003 Peptidase S1, PA clan ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 Gene3D G3DSA:2.30.42.10 298 386 7.6E-18 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 SUPERFAMILY SSF50156 254 371 4.99E-20 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 Pfam PF13365 Trypsin-like peptidase domain 123 257 1.3E-32 T 19-04-2016 ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 Pfam PF13180 PDZ domain 296 382 1.6E-15 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 PRINTS PR00834 HtrA/DegQ protease family signature 250 267 1.1E-51 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 PRINTS PR00834 HtrA/DegQ protease family signature 132 144 1.1E-51 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 1.1E-51 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 PRINTS PR00834 HtrA/DegQ protease family signature 153 173 1.1E-51 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 PRINTS PR00834 HtrA/DegQ protease family signature 193 217 1.1E-51 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 PRINTS PR00834 HtrA/DegQ protease family signature 228 245 1.1E-51 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 PANTHER PTHR22939:SF93 65 386 1.9E-109 T 19-04-2016 ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 Gene3D G3DSA:2.40.10.10 187 297 1.6E-43 T 19-04-2016 ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 Gene3D G3DSA:2.40.10.10 70 186 4.5E-31 T 19-04-2016 ALIDE2_RS13550 232ca4c34d99ff582d99993315e3c07b 391 SMART SM00228 296 373 2.6E-6 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS11650 c114a2d5da76287d05aa5cbdc2ce7b64 239 PANTHER PTHR12532 2 239 6.9E-109 T 19-04-2016 IPR002876 Transcriptional regulator TACO1-like ALIDE2_RS11650 c114a2d5da76287d05aa5cbdc2ce7b64 239 Gene3D G3DSA:3.30.1270.10 82 134 9.0E-37 T 19-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 ALIDE2_RS11650 c114a2d5da76287d05aa5cbdc2ce7b64 239 Gene3D G3DSA:3.30.1270.10 212 238 9.0E-37 T 19-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 ALIDE2_RS11650 c114a2d5da76287d05aa5cbdc2ce7b64 239 Gene3D G3DSA:1.10.10.200 2 78 6.7E-35 T 19-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like ALIDE2_RS11650 c114a2d5da76287d05aa5cbdc2ce7b64 239 Gene3D G3DSA:3.30.70.980 135 205 5.2E-28 T 19-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 ALIDE2_RS11650 c114a2d5da76287d05aa5cbdc2ce7b64 239 Pfam PF01709 Transcriptional regulator 5 237 1.5E-92 T 19-04-2016 IPR002876 Transcriptional regulator TACO1-like ALIDE2_RS11650 c114a2d5da76287d05aa5cbdc2ce7b64 239 SUPERFAMILY SSF75625 3 238 9.16E-96 T 19-04-2016 IPR029072 YebC-like ALIDE2_RS11650 c114a2d5da76287d05aa5cbdc2ce7b64 239 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 238 1.6E-93 T 19-04-2016 IPR002876 Transcriptional regulator TACO1-like ALIDE2_RS11650 c114a2d5da76287d05aa5cbdc2ce7b64 239 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.056 T 19-04-2016 IPR002876 Transcriptional regulator TACO1-like ALIDE2_RS22595 fd17da38c0253e86b873b6a0ae533c7a 376 SUPERFAMILY SSF53383 8 367 1.91E-85 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS22595 fd17da38c0253e86b873b6a0ae533c7a 376 Pfam PF00266 Aminotransferase class-V 27 304 8.6E-27 T 19-04-2016 IPR000192 Aminotransferase class V domain ALIDE2_RS22595 fd17da38c0253e86b873b6a0ae533c7a 376 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 371 202.712 T 19-04-2016 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 ALIDE2_RS22595 fd17da38c0253e86b873b6a0ae533c7a 376 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 8 361 1.1E-146 T 19-04-2016 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 ALIDE2_RS22595 fd17da38c0253e86b873b6a0ae533c7a 376 PIRSF PIRSF000524 1 376 5.0E-61 T 19-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 ALIDE2_RS22595 fd17da38c0253e86b873b6a0ae533c7a 376 PANTHER PTHR21152 1 368 1.6E-123 T 19-04-2016 ALIDE2_RS22595 fd17da38c0253e86b873b6a0ae533c7a 376 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 7 363 1.4E-153 T 19-04-2016 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 ALIDE2_RS22595 fd17da38c0253e86b873b6a0ae533c7a 376 Gene3D G3DSA:3.40.640.10 27 252 1.2E-50 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS22595 fd17da38c0253e86b873b6a0ae533c7a 376 Gene3D G3DSA:3.90.1150.10 253 360 2.4E-38 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS22595 fd17da38c0253e86b873b6a0ae533c7a 376 PANTHER PTHR21152:SF21 1 368 1.6E-123 T 19-04-2016 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 Gene3D G3DSA:3.30.1490.110 98 154 5.6E-10 T 19-04-2016 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 409 29.33 T 19-04-2016 IPR020823 Cell division protein FtsA GO:0007049 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 Gene3D G3DSA:3.30.420.40 155 207 8.5E-25 T 19-04-2016 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 Gene3D G3DSA:3.30.420.40 3 82 8.5E-25 T 19-04-2016 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 PANTHER PTHR32432 1 377 8.6E-142 T 19-04-2016 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 PIRSF PIRSF003101 1 408 9.3E-138 T 19-04-2016 IPR020823 Cell division protein FtsA GO:0007049 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 Gene3D G3DSA:3.90.640.10 233 295 2.1E-16 T 19-04-2016 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 375 1.7E-138 T 19-04-2016 IPR020823 Cell division protein FtsA GO:0007049 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 Gene3D G3DSA:3.30.420.40 296 348 4.9E-31 T 19-04-2016 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 Gene3D G3DSA:3.30.420.40 208 232 4.9E-31 T 19-04-2016 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 SUPERFAMILY SSF53067 196 374 7.78E-46 T 19-04-2016 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 SMART SM00842 9 194 6.2E-96 T 19-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 Pfam PF14450 Cell division protein FtsA 10 190 9.8E-9 T 19-04-2016 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 Pfam PF14450 Cell division protein FtsA 205 359 1.2E-21 T 19-04-2016 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 323 337 - T 19-04-2016 IPR018181 Heat shock protein 70, conserved site ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 SUPERFAMILY SSF53067 7 218 7.25E-56 T 19-04-2016 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 PANTHER PTHR32432:SF4 1 377 8.6E-142 T 19-04-2016 ALIDE2_RS20100 e5473dbe8682fc7793ab381770f1ac75 409 Pfam PF02491 SHS2 domain inserted in FTSA 84 160 4.8E-27 T 19-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 Gene3D G3DSA:3.20.20.450 948 1197 4.1E-100 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 Pfam PF13185 GAF domain 323 470 8.8E-17 T 19-04-2016 IPR003018 GAF domain GO:0005515 ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 SMART SM00052 944 1190 7.4E-119 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 Gene3D G3DSA:3.30.450.20 640 754 1.5E-22 T 19-04-2016 ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 PANTHER PTHR33121 896 1197 1.5E-88 T 19-04-2016 ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 Gene3D G3DSA:3.30.70.270 770 941 1.3E-57 T 19-04-2016 ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 SUPERFAMILY SSF141868 950 1198 1.26E-90 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 Gene3D G3DSA:3.30.450.20 173 293 9.3E-16 T 19-04-2016 ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 SUPERFAMILY SSF55781 326 482 5.02E-22 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 SMART SM00091 645 711 1.9E-11 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 SMART SM00091 177 244 1.8E-5 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 Pfam PF00563 EAL domain 950 1185 3.2E-75 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 SUPERFAMILY SSF55781 38 172 1.22E-6 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 765 933 3.1E-43 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 SMART SM00267 757 934 1.0E-61 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 174 302 2.4E-17 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 649 763 8.1E-18 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 SMART SM00065 310 479 0.0034 T 19-04-2016 IPR003018 GAF domain GO:0005515 ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 SMART SM00065 496 645 0.33 T 19-04-2016 IPR003018 GAF domain GO:0005515 ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 SUPERFAMILY SSF55781 500 647 1.16E-7 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 SUPERFAMILY SSF55785 656 766 4.47E-22 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 PANTHER PTHR33121:SF13 896 1197 1.5E-88 T 19-04-2016 ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 Pfam PF13188 PAS domain 178 240 6.6E-7 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 Gene3D G3DSA:3.30.450.40 11 172 1.4E-5 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 Gene3D G3DSA:3.30.450.40 499 639 8.9E-4 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 Gene3D G3DSA:3.30.450.40 298 483 2.5E-24 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 SUPERFAMILY SSF55785 164 293 2.23E-16 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 SMART SM00086 715 757 2.7E-5 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 SMART SM00086 255 295 460.0 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 Pfam PF00989 PAS fold 649 750 2.1E-15 T 19-04-2016 IPR013767 PAS fold GO:0006355 ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 Pfam PF00990 Diguanylate cyclase, GGDEF domain 768 929 9.9E-49 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS00140 b6894c227e8ba11c56236cea4379c56f 1206 SUPERFAMILY SSF55073 773 936 5.49E-49 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS22815 9b74fe66bc9bac5952e99dd84b18fb94 262 PANTHER PTHR12553 1 216 3.3E-16 T 19-04-2016 ALIDE2_RS22815 9b74fe66bc9bac5952e99dd84b18fb94 262 Gene3D G3DSA:3.60.15.10 1 234 3.7E-30 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS22815 9b74fe66bc9bac5952e99dd84b18fb94 262 Pfam PF12706 Beta-lactamase superfamily domain 26 208 1.6E-15 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS22815 9b74fe66bc9bac5952e99dd84b18fb94 262 SMART SM00849 17 187 7.1E-7 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS22815 9b74fe66bc9bac5952e99dd84b18fb94 262 SUPERFAMILY SSF56281 3 233 1.83E-37 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS22815 9b74fe66bc9bac5952e99dd84b18fb94 262 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 81 102 3.3E-10 T 19-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 ALIDE2_RS22815 9b74fe66bc9bac5952e99dd84b18fb94 262 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 200 213 3.3E-10 T 19-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 ALIDE2_RS22815 9b74fe66bc9bac5952e99dd84b18fb94 262 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 49 67 3.3E-10 T 19-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 Pfam PF00175 Oxidoreductase NAD-binding domain 220 324 1.2E-17 T 19-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 PANTHER PTHR19370 41 344 3.2E-68 T 19-04-2016 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 Gene3D G3DSA:3.40.50.80 212 346 8.9E-36 T 19-04-2016 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 Gene3D G3DSA:2.40.30.10 110 210 1.1E-30 T 19-04-2016 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 244 253 1.5E-6 T 19-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 156 163 1.5E-6 T 19-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 311 319 1.5E-6 T 19-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 140 150 1.5E-6 T 19-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 219 238 1.5E-6 T 19-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 Gene3D G3DSA:3.10.20.30 4 101 2.9E-29 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 Pfam PF00970 Oxidoreductase FAD-binding domain 114 208 9.0E-15 T 19-04-2016 IPR008333 Oxidoreductase, FAD-binding domain ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 SUPERFAMILY SSF54292 6 97 1.31E-26 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 89 2.5E-13 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 311 319 5.3E-21 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 203 212 5.3E-21 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 244 253 5.3E-21 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 156 163 5.3E-21 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 219 238 5.3E-21 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 140 152 5.3E-21 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 SUPERFAMILY SSF63380 110 210 1.0E-21 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 PANTHER PTHR19370:SF68 41 344 3.2E-68 T 19-04-2016 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 SUPERFAMILY SSF52343 211 345 1.57E-36 T 19-04-2016 ALIDE2_RS17370 5134bec6dd7b870066e1927b0f6888f7 353 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 45 53 - T 19-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 Gene3D G3DSA:1.10.150.20 429 492 2.6E-22 T 19-04-2016 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 Gene3D G3DSA:1.10.150.20 358 422 9.2E-21 T 19-04-2016 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 Pfam PF14520 Helix-hairpin-helix domain 432 487 8.3E-9 T 19-04-2016 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 SUPERFAMILY SSF50249 137 201 3.1E-14 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 SUPERFAMILY SSF47794 359 418 4.71E-15 T 19-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 SUPERFAMILY SSF47794 429 492 2.04E-14 T 19-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 426 28.688 T 19-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 Gene3D G3DSA:3.30.300.20 280 348 5.8E-29 T 19-04-2016 IPR015946 K homology domain-like, alpha/beta ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 SUPERFAMILY SSF69705 1 128 8.76E-38 T 19-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 Pfam PF00575 S1 RNA binding domain 139 194 2.6E-5 T 19-04-2016 IPR003029 S1 domain GO:0003676 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 SMART SM00322 303 376 9.0E-4 T 19-04-2016 IPR004087 K Homology domain GO:0003676 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 SMART SM00316 136 202 5.0E-7 T 19-04-2016 IPR022967 RNA-binding domain, S1 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 SUPERFAMILY SSF54814 281 344 5.43E-16 T 19-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 PANTHER PTHR22648:SF0 1 448 2.1E-155 T 19-04-2016 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 SUPERFAMILY SSF54814 203 280 9.16E-29 T 19-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 416 1.1E-17 T 19-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 Pfam PF08529 NusA N-terminal domain 4 127 1.1E-33 T 19-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 Gene3D G3DSA:2.40.50.140 139 200 1.3E-20 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 Gene3D G3DSA:3.30.1480.10 1 128 9.7E-41 T 19-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 343 8.8E-121 T 19-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 Pfam PF13184 NusA-like KH domain 232 299 1.6E-26 T 19-04-2016 IPR025249 KH domain, NusA-like GO:0003723 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 PANTHER PTHR22648 1 448 2.1E-155 T 19-04-2016 ALIDE2_RS10660 ee529b816726afa56f973eec94a0cbb6 494 Gene3D G3DSA:3.30.300.20 201 279 1.5E-33 T 19-04-2016 IPR015946 K homology domain-like, alpha/beta ALIDE2_RS11025 7b447cafeeeb3783418564cf686e7718 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 155 4.1E-36 T 19-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 ALIDE2_RS11025 7b447cafeeeb3783418564cf686e7718 328 PANTHER PTHR23382 3 328 1.3E-189 T 19-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 ALIDE2_RS11025 7b447cafeeeb3783418564cf686e7718 328 Gene3D G3DSA:3.40.50.720 3 156 1.3E-55 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11025 7b447cafeeeb3783418564cf686e7718 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 3 322 2.6E-142 T 19-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 ALIDE2_RS11025 7b447cafeeeb3783418564cf686e7718 328 PIRSF PIRSF000102 2 327 1.8E-64 T 19-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ALIDE2_RS11025 7b447cafeeeb3783418564cf686e7718 328 SUPERFAMILY SSF51735 4 158 1.9E-46 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11025 7b447cafeeeb3783418564cf686e7718 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 328 55.387 T 19-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 ALIDE2_RS11025 7b447cafeeeb3783418564cf686e7718 328 Gene3D G3DSA:3.90.110.10 158 328 4.7E-69 T 19-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ALIDE2_RS11025 7b447cafeeeb3783418564cf686e7718 328 SUPERFAMILY SSF56327 160 328 1.7E-57 T 19-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ALIDE2_RS11025 7b447cafeeeb3783418564cf686e7718 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 160 323 1.9E-30 T 19-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 ALIDE2_RS12155 64b765031fb5e14f7410b37dde2bc949 474 Pfam PF00324 Amino acid permease 26 462 2.0E-108 T 19-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS12155 64b765031fb5e14f7410b37dde2bc949 474 PIRSF PIRSF006060 6 463 1.5E-66 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ALIDE2_RS12155 64b765031fb5e14f7410b37dde2bc949 474 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 19-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ALIDE2_RS12155 64b765031fb5e14f7410b37dde2bc949 474 PANTHER PTHR11785:SF336 18 452 1.2E-195 T 19-04-2016 ALIDE2_RS12155 64b765031fb5e14f7410b37dde2bc949 474 PANTHER PTHR11785 18 452 1.2E-195 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ALIDE2_RS08460 787ca730efc66551468c969ac58de75d 238 Gene3D G3DSA:3.40.1410.10 84 220 3.6E-51 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ALIDE2_RS08460 787ca730efc66551468c969ac58de75d 238 SUPERFAMILY SSF64288 54 230 1.19E-44 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ALIDE2_RS08460 787ca730efc66551468c969ac58de75d 238 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 3 229 1.8E-89 T 19-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 ALIDE2_RS08460 787ca730efc66551468c969ac58de75d 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 4.8E-9 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS08460 787ca730efc66551468c969ac58de75d 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 4.8E-9 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS08460 787ca730efc66551468c969ac58de75d 238 SMART SM00866 87 224 6.5E-37 T 19-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ALIDE2_RS08460 787ca730efc66551468c969ac58de75d 238 SUPERFAMILY SSF46785 2 70 5.61E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08460 787ca730efc66551468c969ac58de75d 238 Pfam PF07702 UTRA domain 88 224 1.7E-36 T 19-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ALIDE2_RS08460 787ca730efc66551468c969ac58de75d 238 PANTHER PTHR11751:SF364 96 114 2.6E-28 T 19-04-2016 ALIDE2_RS08460 787ca730efc66551468c969ac58de75d 238 PANTHER PTHR11751:SF364 4 73 2.6E-28 T 19-04-2016 ALIDE2_RS08460 787ca730efc66551468c969ac58de75d 238 Gene3D G3DSA:1.10.10.10 2 74 3.4E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08460 787ca730efc66551468c969ac58de75d 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 4.8E-20 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS08460 787ca730efc66551468c969ac58de75d 238 PANTHER PTHR11751 96 114 2.6E-28 T 19-04-2016 ALIDE2_RS08460 787ca730efc66551468c969ac58de75d 238 PANTHER PTHR11751 4 73 2.6E-28 T 19-04-2016 ALIDE2_RS08460 787ca730efc66551468c969ac58de75d 238 SMART SM00345 7 66 1.1E-19 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS01775 2cf233a1cc49286d4e1e3f3c8440f64f 274 SUPERFAMILY SSF50104 126 272 4.09E-59 T 19-04-2016 IPR008991 Translation protein SH3-like domain ALIDE2_RS01775 2cf233a1cc49286d4e1e3f3c8440f64f 274 PANTHER PTHR13691 1 274 6.4E-135 T 19-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01775 2cf233a1cc49286d4e1e3f3c8440f64f 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.0E-33 T 19-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01775 2cf233a1cc49286d4e1e3f3c8440f64f 274 PANTHER PTHR13691:SF5 1 274 6.4E-135 T 19-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 ALIDE2_RS01775 2cf233a1cc49286d4e1e3f3c8440f64f 274 PIRSF PIRSF002158 9 274 3.4E-98 T 19-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01775 2cf233a1cc49286d4e1e3f3c8440f64f 274 SUPERFAMILY SSF50249 3 124 4.8E-46 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS01775 2cf233a1cc49286d4e1e3f3c8440f64f 274 Gene3D G3DSA:2.40.50.140 1 113 6.8E-48 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS01775 2cf233a1cc49286d4e1e3f3c8440f64f 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 19-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01775 2cf233a1cc49286d4e1e3f3c8440f64f 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 2.3E-124 T 19-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 ALIDE2_RS01775 2cf233a1cc49286d4e1e3f3c8440f64f 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 2.4E-55 T 19-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01775 2cf233a1cc49286d4e1e3f3c8440f64f 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 45.297 T 19-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 ALIDE2_RS01775 2cf233a1cc49286d4e1e3f3c8440f64f 274 Gene3D G3DSA:2.30.30.30 118 195 3.5E-33 T 19-04-2016 IPR014722 Ribosomal protein L2 domain 2 ALIDE2_RS01775 2cf233a1cc49286d4e1e3f3c8440f64f 274 SMART SM01382 124 252 1.5E-86 T 19-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01775 2cf233a1cc49286d4e1e3f3c8440f64f 274 Gene3D G3DSA:4.10.950.10 196 274 2.8E-33 T 19-04-2016 IPR014726 Ribosomal protein L2, domain 3 ALIDE2_RS01775 2cf233a1cc49286d4e1e3f3c8440f64f 274 SMART SM01383 42 118 9.1E-42 T 19-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21580 865b899ffa68603da6bb826fded71387 207 Gene3D G3DSA:1.10.1050.10 2 102 6.4E-41 T 19-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 ALIDE2_RS21580 865b899ffa68603da6bb826fded71387 207 SUPERFAMILY SSF55174 2 207 1.01E-68 T 19-04-2016 ALIDE2_RS21580 865b899ffa68603da6bb826fded71387 207 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 7.4E-30 T 19-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 ALIDE2_RS21580 865b899ffa68603da6bb826fded71387 207 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 19-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 ALIDE2_RS21580 865b899ffa68603da6bb826fded71387 207 Gene3D G3DSA:3.10.290.10 103 191 5.6E-34 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS21580 865b899ffa68603da6bb826fded71387 207 PANTHER PTHR11831 1 207 5.6E-89 T 19-04-2016 IPR022801 Ribosomal protein S4/S9 ALIDE2_RS21580 865b899ffa68603da6bb826fded71387 207 SMART SM00363 97 161 6.8E-19 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS21580 865b899ffa68603da6bb826fded71387 207 PANTHER PTHR11831:SF4 1 207 5.6E-89 T 19-04-2016 ALIDE2_RS21580 865b899ffa68603da6bb826fded71387 207 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 207 34.989 T 19-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS21580 865b899ffa68603da6bb826fded71387 207 Pfam PF01479 S4 domain 98 144 1.2E-19 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS21580 865b899ffa68603da6bb826fded71387 207 SMART SM01390 3 96 7.1E-47 T 19-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 ALIDE2_RS21580 865b899ffa68603da6bb826fded71387 207 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 207 4.7E-82 T 19-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS16280 3a035e2190438f47913272e2c1559ff5 459 SUPERFAMILY SSF56349 103 385 4.71E-47 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS16280 3a035e2190438f47913272e2c1559ff5 459 PANTHER PTHR30629:SF4 1 391 1.2E-57 T 19-04-2016 ALIDE2_RS16280 3a035e2190438f47913272e2c1559ff5 459 Gene3D G3DSA:1.10.443.10 226 383 3.4E-18 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS16280 3a035e2190438f47913272e2c1559ff5 459 Pfam PF00589 Phage integrase family 240 373 6.8E-12 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS16280 3a035e2190438f47913272e2c1559ff5 459 Pfam PF13356 Domain of unknown function (DUF4102) 7 88 2.1E-14 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 ALIDE2_RS16280 3a035e2190438f47913272e2c1559ff5 459 PANTHER PTHR30629 1 391 1.2E-57 T 19-04-2016 ALIDE2_RS16280 3a035e2190438f47913272e2c1559ff5 459 Gene3D G3DSA:1.10.150.130 103 194 6.4E-8 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS04985 b5405b5998c616f2e2a067e6e6ec52cd 247 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 19-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 ALIDE2_RS04985 b5405b5998c616f2e2a067e6e6ec52cd 247 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 45.5 T 19-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 ALIDE2_RS04985 b5405b5998c616f2e2a067e6e6ec52cd 247 SMART SM00855 3 189 7.4E-29 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ALIDE2_RS04985 b5405b5998c616f2e2a067e6e6ec52cd 247 Gene3D G3DSA:3.40.50.1240 1 246 2.2E-99 T 19-04-2016 IPR029033 Histidine phosphatase superfamily ALIDE2_RS04985 b5405b5998c616f2e2a067e6e6ec52cd 247 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 145 210 8.7E-5 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ALIDE2_RS04985 b5405b5998c616f2e2a067e6e6ec52cd 247 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 128 4.4E-31 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ALIDE2_RS04985 b5405b5998c616f2e2a067e6e6ec52cd 247 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 2 246 1.2E-118 T 19-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 ALIDE2_RS04985 b5405b5998c616f2e2a067e6e6ec52cd 247 SUPERFAMILY SSF53254 1 244 4.71E-79 T 19-04-2016 IPR029033 Histidine phosphatase superfamily ALIDE2_RS04985 b5405b5998c616f2e2a067e6e6ec52cd 247 PANTHER PTHR11931 1 247 1.2E-159 T 19-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 ALIDE2_RS13275 59cad9aa64a256703b1fd89da9e7e161 233 Pfam PF01895 PhoU domain 129 210 6.9E-15 T 19-04-2016 IPR026022 PhoU domain ALIDE2_RS13275 59cad9aa64a256703b1fd89da9e7e161 233 Pfam PF01895 PhoU domain 22 108 1.4E-16 T 19-04-2016 IPR026022 PhoU domain ALIDE2_RS13275 59cad9aa64a256703b1fd89da9e7e161 233 PANTHER PTHR10010:SF14 1 227 9.2E-65 T 19-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 ALIDE2_RS13275 59cad9aa64a256703b1fd89da9e7e161 233 Gene3D G3DSA:1.20.58.220 124 232 1.6E-29 T 19-04-2016 ALIDE2_RS13275 59cad9aa64a256703b1fd89da9e7e161 233 PANTHER PTHR10010 1 227 9.2E-65 T 19-04-2016 ALIDE2_RS13275 59cad9aa64a256703b1fd89da9e7e161 233 Gene3D G3DSA:1.20.58.220 5 119 2.6E-30 T 19-04-2016 ALIDE2_RS13275 59cad9aa64a256703b1fd89da9e7e161 233 SUPERFAMILY SSF109755 8 229 6.49E-64 T 19-04-2016 ALIDE2_RS13275 59cad9aa64a256703b1fd89da9e7e161 233 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 220 4.1E-63 T 19-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 ALIDE2_RS13275 59cad9aa64a256703b1fd89da9e7e161 233 PIRSF PIRSF003107 3 225 2.8E-55 T 19-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 330 339 1.1E-26 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 414 430 1.1E-26 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 104 117 1.1E-26 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 200 218 1.1E-26 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 538 552 1.1E-26 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 Gene3D G3DSA:1.10.245.10 903 972 4.6E-26 T 19-04-2016 IPR003121 SWIB/MDM2 domain GO:0005515 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 Gene3D G3DSA:2.70.20.10 380 505 8.6E-19 T 19-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 Gene3D G3DSA:2.70.20.10 224 347 1.9E-22 T 19-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 SMART SM00437 287 575 5.5E-71 T 19-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 SMART SM00151 903 973 2.1E-27 T 19-04-2016 IPR019835 SWIB domain ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 SMART SM00436 135 230 1.1E-23 T 19-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 Pfam PF01131 DNA topoisomerase 162 614 2.5E-111 T 19-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 637 6.5E-162 T 19-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 324 339 - T 19-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 PANTHER PTHR11390 1 521 2.5E-143 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 PANTHER PTHR11390 538 650 2.5E-143 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 SUPERFAMILY SSF56712 3 628 2.88E-166 T 19-04-2016 IPR023405 DNA topoisomerase, type IA, core domain ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 Gene3D G3DSA:3.40.50.140 3 158 1.6E-40 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 SUPERFAMILY SSF47592 904 972 3.92E-23 T 19-04-2016 IPR003121 SWIB/MDM2 domain GO:0005515 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 SMART SM00493 3 130 7.0E-15 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 Gene3D G3DSA:1.10.460.10 165 223 1.1E-50 T 19-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 Gene3D G3DSA:1.10.460.10 508 629 1.1E-50 T 19-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 Pfam PF01751 Toprim domain 4 140 1.0E-9 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 Pfam PF02201 SWIB/MDM2 domain 904 972 3.9E-25 T 19-04-2016 IPR003121 SWIB/MDM2 domain GO:0005515 ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 Pfam PF13342 C-terminal repeat of topoisomerase 787 848 6.3E-15 T 19-04-2016 IPR025589 Topoisomerase C-terminal repeat ALIDE2_RS22515 312e335aa6e643c65c58fcc6c4053a0a 973 Pfam PF13342 C-terminal repeat of topoisomerase 671 735 1.1E-18 T 19-04-2016 IPR025589 Topoisomerase C-terminal repeat ALIDE2_RS00485 2e9c1d79dad8e4917080c4b56baa7c55 387 SUPERFAMILY SSF51604 93 363 1.28E-69 T 19-04-2016 IPR029065 Enolase C-terminal domain-like ALIDE2_RS00485 2e9c1d79dad8e4917080c4b56baa7c55 387 Pfam PF13378 Enolase C-terminal domain-like 154 361 5.5E-54 T 19-04-2016 IPR029065 Enolase C-terminal domain-like ALIDE2_RS00485 2e9c1d79dad8e4917080c4b56baa7c55 387 PANTHER PTHR13794 15 363 2.9E-95 T 19-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 ALIDE2_RS00485 2e9c1d79dad8e4917080c4b56baa7c55 387 Gene3D G3DSA:3.20.20.120 115 351 2.0E-77 T 19-04-2016 IPR029065 Enolase C-terminal domain-like ALIDE2_RS00485 2e9c1d79dad8e4917080c4b56baa7c55 387 Gene3D G3DSA:3.30.390.10 1 114 2.0E-39 T 19-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ALIDE2_RS00485 2e9c1d79dad8e4917080c4b56baa7c55 387 SUPERFAMILY SSF54826 1 109 3.69E-30 T 19-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ALIDE2_RS00485 2e9c1d79dad8e4917080c4b56baa7c55 387 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 80 105 - T 19-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 ALIDE2_RS00485 2e9c1d79dad8e4917080c4b56baa7c55 387 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 12 105 1.1E-20 T 19-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ALIDE2_RS00485 2e9c1d79dad8e4917080c4b56baa7c55 387 PANTHER PTHR13794:SF4 15 363 2.9E-95 T 19-04-2016 ALIDE2_RS00485 2e9c1d79dad8e4917080c4b56baa7c55 387 SMART SM00922 123 234 1.7E-10 T 19-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ALIDE2_RS14530 6a6291c216059b9ee0470dae2f441138 324 SUPERFAMILY SSF53335 57 211 6.51E-16 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS14530 6a6291c216059b9ee0470dae2f441138 324 SUPERFAMILY SSF53335 259 319 6.51E-16 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS14530 6a6291c216059b9ee0470dae2f441138 324 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 197 320 4.1E-40 T 19-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent ALIDE2_RS14530 6a6291c216059b9ee0470dae2f441138 324 Gene3D G3DSA:3.40.50.150 288 309 3.7E-8 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS14530 6a6291c216059b9ee0470dae2f441138 324 Gene3D G3DSA:3.40.50.150 68 201 3.7E-8 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS14530 6a6291c216059b9ee0470dae2f441138 324 PANTHER PTHR30468:SF6 25 323 1.1E-60 T 19-04-2016 ALIDE2_RS14530 6a6291c216059b9ee0470dae2f441138 324 PANTHER PTHR30468 25 323 1.1E-60 T 19-04-2016 ALIDE2_RS14530 6a6291c216059b9ee0470dae2f441138 324 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 25 321 2.5E-108 T 19-04-2016 IPR017804 Methyltransferase EgtD-like ALIDE2_RS14530 6a6291c216059b9ee0470dae2f441138 324 PIRSF PIRSF018005 3 324 2.0E-108 T 19-04-2016 IPR017804 Methyltransferase EgtD-like ALIDE2_RS23230 279660ab6560f5e6f51061678e2d2164 517 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 299 312 - T 19-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 ALIDE2_RS23230 279660ab6560f5e6f51061678e2d2164 517 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 196 490 24.245 T 19-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 ALIDE2_RS23230 279660ab6560f5e6f51061678e2d2164 517 SUPERFAMILY SSF53335 224 478 1.94E-65 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS23230 279660ab6560f5e6f51061678e2d2164 517 PANTHER PTHR11558:SF26 241 485 1.0E-83 T 19-04-2016 ALIDE2_RS23230 279660ab6560f5e6f51061678e2d2164 517 Gene3D G3DSA:3.40.50.150 276 491 1.0E-70 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS23230 279660ab6560f5e6f51061678e2d2164 517 Pfam PF01564 Spermine/spermidine synthase 236 456 1.1E-40 T 19-04-2016 ALIDE2_RS23230 279660ab6560f5e6f51061678e2d2164 517 PANTHER PTHR11558 241 485 1.0E-83 T 19-04-2016 ALIDE2_RS03195 9cba7c910e0dfe58995fa8465ea3d068 141 PANTHER PTHR11049:SF5 17 139 5.2E-48 T 19-04-2016 ALIDE2_RS03195 9cba7c910e0dfe58995fa8465ea3d068 141 SUPERFAMILY SSF54637 15 136 4.09E-35 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS03195 9cba7c910e0dfe58995fa8465ea3d068 141 PANTHER PTHR11049 17 139 5.2E-48 T 19-04-2016 ALIDE2_RS03195 9cba7c910e0dfe58995fa8465ea3d068 141 Gene3D G3DSA:3.10.129.10 12 136 3.4E-36 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS03195 9cba7c910e0dfe58995fa8465ea3d068 141 Pfam PF03061 Thioesterase superfamily 32 106 2.9E-14 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS23355 c06a61b32841ee5ff0633cf502649e54 237 Pfam PF04452 RNA methyltransferase 19 234 7.4E-65 T 19-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS23355 c06a61b32841ee5ff0633cf502649e54 237 Gene3D G3DSA:2.40.240.20 1 66 1.5E-26 T 19-04-2016 ALIDE2_RS23355 c06a61b32841ee5ff0633cf502649e54 237 PANTHER PTHR30027 1 234 1.8E-65 T 19-04-2016 ALIDE2_RS23355 c06a61b32841ee5ff0633cf502649e54 237 PIRSF PIRSF015601 1 237 2.7E-54 T 19-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS23355 c06a61b32841ee5ff0633cf502649e54 237 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 11 234 8.8E-54 T 19-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS23355 c06a61b32841ee5ff0633cf502649e54 237 PANTHER PTHR30027:SF3 1 234 1.8E-65 T 19-04-2016 ALIDE2_RS23355 c06a61b32841ee5ff0633cf502649e54 237 SUPERFAMILY SSF88697 1 67 8.12E-14 T 19-04-2016 IPR015947 PUA-like domain ALIDE2_RS23355 c06a61b32841ee5ff0633cf502649e54 237 SUPERFAMILY SSF75217 71 234 6.98E-46 T 19-04-2016 IPR029028 Alpha/beta knot methyltransferases ALIDE2_RS23355 c06a61b32841ee5ff0633cf502649e54 237 Gene3D G3DSA:3.40.1280.10 74 235 7.7E-53 T 19-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ALIDE2_RS11905 01679337c0b2cd41078329f370653a85 483 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 21 482 67.486 T 19-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 ALIDE2_RS11905 01679337c0b2cd41078329f370653a85 483 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 28 402 5.6E-64 T 19-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 ALIDE2_RS11905 01679337c0b2cd41078329f370653a85 483 PANTHER PTHR11061 424 481 3.6E-91 T 19-04-2016 ALIDE2_RS11905 01679337c0b2cd41078329f370653a85 483 PANTHER PTHR11061 22 402 3.6E-91 T 19-04-2016 ALIDE2_RS11905 01679337c0b2cd41078329f370653a85 483 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 464 474 - T 19-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site ALIDE2_RS11905 01679337c0b2cd41078329f370653a85 483 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 431 481 2.6E-4 T 19-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 ALIDE2_RS11905 01679337c0b2cd41078329f370653a85 483 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 280 396 1.7E-10 T 19-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 ALIDE2_RS11905 01679337c0b2cd41078329f370653a85 483 SUPERFAMILY SSF53335 422 481 1.92E-68 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS11905 01679337c0b2cd41078329f370653a85 483 SUPERFAMILY SSF53335 80 394 1.92E-68 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS11905 01679337c0b2cd41078329f370653a85 483 PANTHER PTHR11061:SF30 424 481 3.6E-91 T 19-04-2016 ALIDE2_RS11905 01679337c0b2cd41078329f370653a85 483 PANTHER PTHR11061:SF30 22 402 3.6E-91 T 19-04-2016 ALIDE2_RS11905 01679337c0b2cd41078329f370653a85 483 SUPERFAMILY SSF50249 22 77 4.34E-8 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS11905 01679337c0b2cd41078329f370653a85 483 Gene3D G3DSA:3.40.50.150 272 481 7.5E-46 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS11905 01679337c0b2cd41078329f370653a85 483 Gene3D G3DSA:2.40.50.140 22 89 1.9E-19 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS03900 0c28633dca22b54946fc85d767ee890d 353 PANTHER PTHR11835 1 351 2.8E-122 T 19-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 ALIDE2_RS03900 0c28633dca22b54946fc85d767ee890d 353 Gene3D G3DSA:3.40.718.10 2 350 1.8E-101 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS03900 0c28633dca22b54946fc85d767ee890d 353 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 236 255 - T 19-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 ALIDE2_RS03900 0c28633dca22b54946fc85d767ee890d 353 SUPERFAMILY SSF53659 1 350 1.17E-102 T 19-04-2016 ALIDE2_RS03900 0c28633dca22b54946fc85d767ee890d 353 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 344 4.2E-86 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS03900 0c28633dca22b54946fc85d767ee890d 353 SMART SM01329 2 346 9.2E-138 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS03900 0c28633dca22b54946fc85d767ee890d 353 PANTHER PTHR11835:SF34 1 351 2.8E-122 T 19-04-2016 ALIDE2_RS01800 633e42d85bfd6d476ed0a9479b562eac 65 Pfam PF00831 Ribosomal L29 protein 5 61 2.2E-19 T 19-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01800 633e42d85bfd6d476ed0a9479b562eac 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 2 61 16.415 T 19-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01800 633e42d85bfd6d476ed0a9479b562eac 65 SUPERFAMILY SSF46561 2 63 3.92E-18 T 19-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01800 633e42d85bfd6d476ed0a9479b562eac 65 ProSitePatterns PS00579 Ribosomal protein L29 signature. 40 54 - T 19-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01800 633e42d85bfd6d476ed0a9479b562eac 65 Gene3D G3DSA:1.10.287.310 3 63 3.9E-23 T 19-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01800 633e42d85bfd6d476ed0a9479b562eac 65 PANTHER PTHR10916 1 65 1.7E-16 T 19-04-2016 ALIDE2_RS01800 633e42d85bfd6d476ed0a9479b562eac 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 61 9.2E-17 T 19-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 SMART SM00839 203 445 4.2E-91 T 19-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 PANTHER PTHR11606:SF4 8 447 1.2E-244 T 19-04-2016 ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 201 445 1.3E-85 T 19-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 Gene3D G3DSA:3.40.192.10 67 187 9.4E-62 T 19-04-2016 ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 PIRSF PIRSF000185 21 447 1.9E-117 T 19-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 121 134 - T 19-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 SUPERFAMILY SSF53223 6 195 2.88E-75 T 19-04-2016 ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 Gene3D G3DSA:3.40.50.720 208 371 2.5E-61 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 Gene3D G3DSA:1.10.285.10 372 446 1.9E-24 T 19-04-2016 ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 Gene3D G3DSA:1.10.285.10 4 66 1.4E-28 T 19-04-2016 ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 1.4E-32 T 19-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 371 382 1.4E-32 T 19-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 113 127 1.4E-32 T 19-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 192 214 1.4E-32 T 19-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 SUPERFAMILY SSF51735 201 446 1.41E-74 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 PANTHER PTHR11606 8 447 1.2E-244 T 19-04-2016 ALIDE2_RS19965 bf21674e7f1cde50d2cf2a22716a37b0 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 56 184 1.3E-52 T 19-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS18835 e2f86e76bd9737850c9eb06492134b88 229 PANTHER PTHR30133 1 228 1.4E-98 T 19-04-2016 ALIDE2_RS18835 e2f86e76bd9737850c9eb06492134b88 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 114 5.1E-19 T 19-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 ALIDE2_RS18835 e2f86e76bd9737850c9eb06492134b88 229 Gene3D G3DSA:1.10.3720.10 7 219 7.1E-37 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18835 e2f86e76bd9737850c9eb06492134b88 229 SUPERFAMILY SSF161098 8 205 1.23E-36 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18835 e2f86e76bd9737850c9eb06492134b88 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 219 6.1E-18 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18835 e2f86e76bd9737850c9eb06492134b88 229 PANTHER PTHR30133:SF3 1 228 1.4E-98 T 19-04-2016 ALIDE2_RS19180 acec01a77a79d896497cf4279976e53d 339 Gene3D G3DSA:1.20.120.520 151 313 2.9E-26 T 19-04-2016 ALIDE2_RS19180 acec01a77a79d896497cf4279976e53d 339 PANTHER PTHR31964 1 145 2.0E-21 T 19-04-2016 ALIDE2_RS19180 acec01a77a79d896497cf4279976e53d 339 Pfam PF00582 Universal stress protein family 1 145 9.4E-24 T 19-04-2016 IPR006016 UspA GO:0006950 ALIDE2_RS19180 acec01a77a79d896497cf4279976e53d 339 Gene3D G3DSA:3.40.50.620 1 145 2.5E-27 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS19180 acec01a77a79d896497cf4279976e53d 339 PRINTS PR01438 Universal stress protein signature 125 147 2.4E-9 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS19180 acec01a77a79d896497cf4279976e53d 339 PRINTS PR01438 Universal stress protein signature 107 119 2.4E-9 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS19180 acec01a77a79d896497cf4279976e53d 339 PRINTS PR01438 Universal stress protein signature 2 20 2.4E-9 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS19180 acec01a77a79d896497cf4279976e53d 339 SUPERFAMILY SSF52402 1 145 4.35E-28 T 19-04-2016 ALIDE2_RS19180 acec01a77a79d896497cf4279976e53d 339 Pfam PF01814 Hemerythrin HHE cation binding domain 157 291 9.7E-15 T 19-04-2016 IPR012312 Haemerythrin-like ALIDE2_RS01105 6362b6e9024c64658783f83eefe43171 286 Pfam PF12697 Alpha/beta hydrolase family 35 269 1.2E-13 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS01105 6362b6e9024c64658783f83eefe43171 286 Gene3D G3DSA:3.40.50.1820 12 281 1.4E-48 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS01105 6362b6e9024c64658783f83eefe43171 286 SUPERFAMILY SSF53474 22 278 1.08E-47 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS01105 6362b6e9024c64658783f83eefe43171 286 PANTHER PTHR10992:SF771 22 278 3.5E-37 T 19-04-2016 ALIDE2_RS01105 6362b6e9024c64658783f83eefe43171 286 PANTHER PTHR10992 22 278 3.5E-37 T 19-04-2016 ALIDE2_RS00845 7a8aa8cf7ddca19915c16f3ba3a1fa9c 393 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 380 5.7E-110 T 19-04-2016 IPR017439 Amidohydrolase GO:0016787 ALIDE2_RS00845 7a8aa8cf7ddca19915c16f3ba3a1fa9c 393 PANTHER PTHR11014:SF63 2 392 8.8E-148 T 19-04-2016 ALIDE2_RS00845 7a8aa8cf7ddca19915c16f3ba3a1fa9c 393 PANTHER PTHR11014 2 392 8.8E-148 T 19-04-2016 ALIDE2_RS00845 7a8aa8cf7ddca19915c16f3ba3a1fa9c 393 Pfam PF07687 Peptidase dimerisation domain 192 289 1.9E-11 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS00845 7a8aa8cf7ddca19915c16f3ba3a1fa9c 393 Gene3D G3DSA:3.30.70.360 187 303 1.1E-41 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS00845 7a8aa8cf7ddca19915c16f3ba3a1fa9c 393 SUPERFAMILY SSF55031 189 302 5.1E-30 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS00845 7a8aa8cf7ddca19915c16f3ba3a1fa9c 393 Gene3D G3DSA:3.40.630.10 304 392 1.8E-102 T 19-04-2016 ALIDE2_RS00845 7a8aa8cf7ddca19915c16f3ba3a1fa9c 393 Gene3D G3DSA:3.40.630.10 5 184 1.8E-102 T 19-04-2016 ALIDE2_RS00845 7a8aa8cf7ddca19915c16f3ba3a1fa9c 393 PIRSF PIRSF005962 6 392 1.9E-123 T 19-04-2016 IPR017439 Amidohydrolase GO:0016787 ALIDE2_RS00845 7a8aa8cf7ddca19915c16f3ba3a1fa9c 393 SUPERFAMILY SSF53187 10 203 7.78E-89 T 19-04-2016 ALIDE2_RS00845 7a8aa8cf7ddca19915c16f3ba3a1fa9c 393 SUPERFAMILY SSF53187 304 391 7.78E-89 T 19-04-2016 ALIDE2_RS00845 7a8aa8cf7ddca19915c16f3ba3a1fa9c 393 Pfam PF01546 Peptidase family M20/M25/M40 79 389 9.1E-34 T 19-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 SUPERFAMILY SSF56176 217 389 3.27E-51 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 226 389 1.9E-49 T 19-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 Gene3D G3DSA:3.30.390.50 399 498 4.2E-36 T 19-04-2016 ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 Gene3D G3DSA:3.30.43.10 227 276 1.4E-23 T 19-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 SMART SM01092 397 498 1.2E-35 T 19-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 Pfam PF01799 [2Fe-2S] binding domain 94 180 4.6E-26 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 SUPERFAMILY SSF55447 396 500 2.35E-33 T 19-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 PANTHER PTHR11908 10 497 8.1E-115 T 19-04-2016 ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 Gene3D G3DSA:1.10.150.120 112 190 9.0E-31 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 51 59 - T 19-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 PIRSF PIRSF036557 11 511 3.1E-218 T 19-04-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 14 498 9.1E-200 T 19-04-2016 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 SUPERFAMILY SSF54292 13 98 6.47E-16 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 398 497 3.0E-30 T 19-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 Gene3D G3DSA:3.10.20.30 12 97 1.3E-25 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 SUPERFAMILY SSF47741 116 193 4.06E-29 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 ALIDE2_RS20005 17c1f4aa263c9734f5201e2f882c7e62 519 Gene3D G3DSA:3.30.465.10 277 389 4.3E-36 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ALIDE2_RS19945 a5464b66ace51dd14918a68140884b3e 497 PANTHER PTHR22773 1 491 2.9E-148 T 19-04-2016 ALIDE2_RS19945 a5464b66ace51dd14918a68140884b3e 497 Pfam PF00361 Proton-conducting membrane transporter 126 430 4.8E-70 T 19-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 ALIDE2_RS19945 a5464b66ace51dd14918a68140884b3e 497 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 7 480 6.1E-130 T 19-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 ALIDE2_RS19945 a5464b66ace51dd14918a68140884b3e 497 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 5 484 17.701 T 19-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 ALIDE2_RS19945 a5464b66ace51dd14918a68140884b3e 497 PANTHER PTHR22773:SF41 1 491 2.9E-148 T 19-04-2016 ALIDE2_RS22165 6ee3d7742e51f9afc567b677f9af5aef 160 Gene3D G3DSA:1.10.760.10 56 158 9.3E-19 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS22165 6ee3d7742e51f9afc567b677f9af5aef 160 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 63 154 2.3E-12 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS22165 6ee3d7742e51f9afc567b677f9af5aef 160 SUPERFAMILY SSF46626 58 155 2.18E-15 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS22165 6ee3d7742e51f9afc567b677f9af5aef 160 SUPERFAMILY SSF46626 15 25 2.18E-15 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS22165 6ee3d7742e51f9afc567b677f9af5aef 160 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 16 158 9.0E-58 T 19-04-2016 IPR030991 Cytochrome c-550 PedF ALIDE2_RS06640 49f44f2b16a9b3441c8d28545919d921 229 SUPERFAMILY SSF103039 19 174 7.06E-21 T 19-04-2016 IPR028976 CheC-like domain ALIDE2_RS06640 49f44f2b16a9b3441c8d28545919d921 229 Pfam PF11813 Protein of unknown function (DUF3334) 8 229 4.3E-115 T 19-04-2016 IPR024513 Protein of unknown function DUF3334 ALIDE2_RS06640 49f44f2b16a9b3441c8d28545919d921 229 Gene3D G3DSA:3.40.1550.10 21 164 6.1E-10 T 19-04-2016 IPR028976 CheC-like domain ALIDE2_RS10045 cc6b1e12fa4733fecbd02f183c6b34a3 471 SUPERFAMILY SSF53335 167 447 1.59E-51 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS10045 cc6b1e12fa4733fecbd02f183c6b34a3 471 SMART SM00470 7 93 2.0E-12 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS10045 cc6b1e12fa4733fecbd02f183c6b34a3 471 Gene3D G3DSA:3.90.1530.10 5 92 1.6E-15 T 19-04-2016 ALIDE2_RS10045 cc6b1e12fa4733fecbd02f183c6b34a3 471 PANTHER PTHR13370 375 435 1.2E-12 T 19-04-2016 ALIDE2_RS10045 cc6b1e12fa4733fecbd02f183c6b34a3 471 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 417 437 2.2E-17 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS10045 cc6b1e12fa4733fecbd02f183c6b34a3 471 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 394 412 2.2E-17 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS10045 cc6b1e12fa4733fecbd02f183c6b34a3 471 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 375 392 2.2E-17 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS10045 cc6b1e12fa4733fecbd02f183c6b34a3 471 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 198 212 2.2E-17 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS10045 cc6b1e12fa4733fecbd02f183c6b34a3 471 SUPERFAMILY SSF110849 5 112 1.74E-26 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS10045 cc6b1e12fa4733fecbd02f183c6b34a3 471 Gene3D G3DSA:3.40.50.150 353 441 4.1E-46 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS10045 cc6b1e12fa4733fecbd02f183c6b34a3 471 Gene3D G3DSA:3.40.50.150 165 316 4.1E-46 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS10045 cc6b1e12fa4733fecbd02f183c6b34a3 471 Pfam PF01555 DNA methylase 200 433 4.4E-23 T 19-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS10045 cc6b1e12fa4733fecbd02f183c6b34a3 471 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 203 208 - T 19-04-2016 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 KEGG: 00860+2.1.1.11|MetaCyc: PWY-5531|MetaCyc: PWY-7159 ALIDE2_RS10045 cc6b1e12fa4733fecbd02f183c6b34a3 471 Pfam PF02195 ParB-like nuclease domain 11 78 1.6E-11 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS11655 e5daa338b3c1ea711180349dac9990ba 428 SMART SM01209 101 298 1.9E-134 T 19-04-2016 ALIDE2_RS11655 e5daa338b3c1ea711180349dac9990ba 428 Gene3D G3DSA:3.30.1490.20 119 192 6.8E-32 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS11655 e5daa338b3c1ea711180349dac9990ba 428 SUPERFAMILY SSF51246 331 425 5.34E-31 T 19-04-2016 IPR011054 Rudiment single hybrid motif ALIDE2_RS11655 e5daa338b3c1ea711180349dac9990ba 428 PANTHER PTHR10520 1 426 2.2E-270 T 19-04-2016 ALIDE2_RS11655 e5daa338b3c1ea711180349dac9990ba 428 SMART SM01210 332 425 2.2E-51 T 19-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 ALIDE2_RS11655 e5daa338b3c1ea711180349dac9990ba 428 Gene3D G3DSA:3.90.600.10 333 424 1.3E-33 T 19-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 ALIDE2_RS11655 e5daa338b3c1ea711180349dac9990ba 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 425 43.165 T 19-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 ALIDE2_RS11655 e5daa338b3c1ea711180349dac9990ba 428 SUPERFAMILY SSF52440 1 101 3.17E-35 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS11655 e5daa338b3c1ea711180349dac9990ba 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 2.7E-36 T 19-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 ALIDE2_RS11655 e5daa338b3c1ea711180349dac9990ba 428 Gene3D G3DSA:3.40.50.20 2 93 6.2E-36 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS11655 e5daa338b3c1ea711180349dac9990ba 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 298 1.0E-75 T 19-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 ALIDE2_RS11655 e5daa338b3c1ea711180349dac9990ba 428 Gene3D G3DSA:3.30.470.20 193 330 7.7E-63 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS11655 e5daa338b3c1ea711180349dac9990ba 428 SUPERFAMILY SSF56059 102 327 8.49E-63 T 19-04-2016 ALIDE2_RS11655 e5daa338b3c1ea711180349dac9990ba 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 425 6.7E-169 T 19-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 ALIDE2_RS11655 e5daa338b3c1ea711180349dac9990ba 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 333 423 5.8E-30 T 19-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 Gene3D G3DSA:3.30.70.1430 574 673 3.9E-24 T 19-04-2016 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1038 0.0 T 19-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 PANTHER PTHR32063:SF13 1 1034 0.0 T 19-04-2016 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 SUPERFAMILY SSF82693 38 130 2.09E-24 T 19-04-2016 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 SUPERFAMILY SSF82693 572 673 5.23E-23 T 19-04-2016 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 SUPERFAMILY SSF82866 296 497 2.49E-49 T 19-04-2016 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 Gene3D G3DSA:3.30.2090.10 723 812 3.6E-24 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 Gene3D G3DSA:3.30.2090.10 181 272 5.5E-21 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 SUPERFAMILY SSF82714 725 810 1.7E-20 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 SUPERFAMILY SSF82714 182 271 1.19E-17 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 Gene3D G3DSA:3.30.70.1430 38 139 1.9E-30 T 19-04-2016 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 Gene3D G3DSA:1.20.1640.10 293 501 2.4E-57 T 19-04-2016 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 SUPERFAMILY SSF82866 808 1029 1.44E-43 T 19-04-2016 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 SUPERFAMILY SSF82693 274 330 8.72E-22 T 19-04-2016 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 PANTHER PTHR32063 1 1034 0.0 T 19-04-2016 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 Gene3D G3DSA:1.10.3850.10 816 1029 9.0E-56 T 19-04-2016 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 SUPERFAMILY SSF82693 136 182 8.72E-22 T 19-04-2016 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 8.0E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 8.0E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 8.0E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 8.0E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 8.0E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 PRINTS PR00702 Acriflavin resistance protein family signature 559 576 8.0E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 8.0E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 8.0E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12875 899ed9a7890f3fa1e47385ad4ed2a322 1047 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 8.0E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06090 c881ff8d804c9234da03fe57ad10ebc6 543 PANTHER PTHR30029:SF2 41 534 4.2E-210 T 19-04-2016 ALIDE2_RS06090 c881ff8d804c9234da03fe57ad10ebc6 543 PANTHER PTHR30029 41 534 4.2E-210 T 19-04-2016 ALIDE2_RS06090 c881ff8d804c9234da03fe57ad10ebc6 543 Pfam PF04293 SpoVR like protein 51 484 1.1E-172 T 19-04-2016 IPR007390 Sporulation stage V, protein R ALIDE2_RS05055 a61346a42dc87ec8f14e2c37c953de2b 374 PANTHER PTHR30573 29 359 6.3E-148 T 19-04-2016 ALIDE2_RS05055 a61346a42dc87ec8f14e2c37c953de2b 374 Pfam PF02445 Quinolinate synthetase A protein 46 353 3.5E-104 T 19-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 ALIDE2_RS05055 a61346a42dc87ec8f14e2c37c953de2b 374 SUPERFAMILY SSF142754 44 354 4.05E-108 T 19-04-2016 ALIDE2_RS05055 a61346a42dc87ec8f14e2c37c953de2b 374 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 40 355 2.2E-107 T 19-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 ALIDE2_RS19130 975564ff30303acfec6b88693cf5ea25 511 Gene3D G3DSA:1.10.10.60 12 41 3.0E-5 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS19130 975564ff30303acfec6b88693cf5ea25 511 PANTHER PTHR35004 2 445 2.7E-66 T 19-04-2016 ALIDE2_RS19130 975564ff30303acfec6b88693cf5ea25 511 Gene3D G3DSA:3.30.420.10 161 280 5.8E-4 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS19130 975564ff30303acfec6b88693cf5ea25 511 Pfam PF00665 Integrase core domain 131 251 1.3E-13 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS19130 975564ff30303acfec6b88693cf5ea25 511 PANTHER PTHR35004:SF2 2 445 2.7E-66 T 19-04-2016 ALIDE2_RS14935 975564ff30303acfec6b88693cf5ea25 511 Gene3D G3DSA:1.10.10.60 12 41 3.0E-5 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS14935 975564ff30303acfec6b88693cf5ea25 511 PANTHER PTHR35004 2 445 2.7E-66 T 19-04-2016 ALIDE2_RS14935 975564ff30303acfec6b88693cf5ea25 511 Gene3D G3DSA:3.30.420.10 161 280 5.8E-4 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS14935 975564ff30303acfec6b88693cf5ea25 511 Pfam PF00665 Integrase core domain 131 251 1.3E-13 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS14935 975564ff30303acfec6b88693cf5ea25 511 PANTHER PTHR35004:SF2 2 445 2.7E-66 T 19-04-2016 ALIDE2_RS11105 efc6d9fa367f429c92e543c317152888 346 Pfam PF13478 XdhC Rossmann domain 170 312 8.9E-37 T 19-04-2016 IPR027051 XdhC Rossmann domain ALIDE2_RS11105 efc6d9fa367f429c92e543c317152888 346 PANTHER PTHR30388:SF4 5 318 3.6E-76 T 19-04-2016 ALIDE2_RS11105 efc6d9fa367f429c92e543c317152888 346 PANTHER PTHR30388 5 318 3.6E-76 T 19-04-2016 ALIDE2_RS11105 efc6d9fa367f429c92e543c317152888 346 Gene3D G3DSA:3.40.50.720 172 258 1.4E-5 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11105 efc6d9fa367f429c92e543c317152888 346 Pfam PF02625 XdhC and CoxI family 15 69 3.4E-21 T 19-04-2016 IPR003777 XdhC- CoxI ALIDE2_RS06280 07656cfcbb191f038e54f4a9c142fdbe 60 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 5.7E-21 T 19-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS06280 07656cfcbb191f038e54f4a9c142fdbe 60 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.956 T 19-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS06280 07656cfcbb191f038e54f4a9c142fdbe 60 Pfam PF01783 Ribosomal L32p protein family 2 55 1.1E-19 T 19-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS06280 07656cfcbb191f038e54f4a9c142fdbe 60 SUPERFAMILY SSF57829 2 55 1.77E-17 T 19-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 ALIDE2_RS06280 07656cfcbb191f038e54f4a9c142fdbe 60 PANTHER PTHR35534 1 60 3.6E-27 T 19-04-2016 ALIDE2_RS00890 648cebdfda3ff39d39a82ec3f3135228 539 Gene3D G3DSA:3.90.226.10 280 531 3.0E-73 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS00890 648cebdfda3ff39d39a82ec3f3135228 539 Gene3D G3DSA:3.90.226.10 42 268 8.8E-48 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS00890 648cebdfda3ff39d39a82ec3f3135228 539 Pfam PF01039 Carboxyl transferase domain 49 526 2.7E-113 T 19-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS00890 648cebdfda3ff39d39a82ec3f3135228 539 PANTHER PTHR22855:SF29 13 539 1.7E-293 T 19-04-2016 ALIDE2_RS00890 648cebdfda3ff39d39a82ec3f3135228 539 SUPERFAMILY SSF52096 38 270 7.12E-49 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS00890 648cebdfda3ff39d39a82ec3f3135228 539 PANTHER PTHR22855 13 539 1.7E-293 T 19-04-2016 ALIDE2_RS00890 648cebdfda3ff39d39a82ec3f3135228 539 SUPERFAMILY SSF52096 238 518 6.84E-77 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS13065 d2d6b0cffb282b406090b15acb7887a2 260 SMART SM00895 94 218 8.8E-13 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS13065 d2d6b0cffb282b406090b15acb7887a2 260 PANTHER PTHR11751 24 110 1.2E-22 T 19-04-2016 ALIDE2_RS13065 d2d6b0cffb282b406090b15acb7887a2 260 Gene3D G3DSA:1.20.120.530 87 229 4.5E-27 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS13065 d2d6b0cffb282b406090b15acb7887a2 260 SMART SM00345 26 84 2.1E-7 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS13065 d2d6b0cffb282b406090b15acb7887a2 260 SUPERFAMILY SSF46785 18 88 7.44E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS13065 d2d6b0cffb282b406090b15acb7887a2 260 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 83 2.6E-14 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS13065 d2d6b0cffb282b406090b15acb7887a2 260 PANTHER PTHR11751:SF395 24 110 1.2E-22 T 19-04-2016 ALIDE2_RS13065 d2d6b0cffb282b406090b15acb7887a2 260 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 1.7E-5 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS13065 d2d6b0cffb282b406090b15acb7887a2 260 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 1.7E-5 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS13065 d2d6b0cffb282b406090b15acb7887a2 260 SUPERFAMILY SSF48008 89 224 8.63E-23 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS13065 d2d6b0cffb282b406090b15acb7887a2 260 Gene3D G3DSA:1.10.10.10 5 83 4.9E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS13065 d2d6b0cffb282b406090b15acb7887a2 260 Pfam PF07729 FCD domain 95 217 8.5E-19 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS06645 0f117bbd5d0c4c00c4ccdb7a44f14a54 195 PANTHER PTHR30529 4 189 8.5E-54 T 19-04-2016 ALIDE2_RS06645 0f117bbd5d0c4c00c4ccdb7a44f14a54 195 Gene3D G3DSA:1.20.950.20 10 187 2.0E-4 T 19-04-2016 ALIDE2_RS06645 0f117bbd5d0c4c00c4ccdb7a44f14a54 195 Pfam PF01292 Prokaryotic cytochrome b561 11 186 1.9E-28 T 19-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ALIDE2_RS06645 0f117bbd5d0c4c00c4ccdb7a44f14a54 195 SUPERFAMILY SSF81342 9 188 1.02E-39 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 ALIDE2_RS06645 0f117bbd5d0c4c00c4ccdb7a44f14a54 195 PANTHER PTHR30529:SF5 4 189 8.5E-54 T 19-04-2016 ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 PANTHER PTHR22942 9 346 1.1E-204 T 19-04-2016 ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 14 335 3.1E-173 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 PRINTS PR00142 RecA protein signature 221 249 1.2E-85 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 PRINTS PR00142 RecA protein signature 176 205 1.2E-85 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 PRINTS PR00142 RecA protein signature 138 167 1.2E-85 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 PRINTS PR00142 RecA protein signature 104 133 1.2E-85 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 PRINTS PR00142 RecA protein signature 308 325 1.2E-85 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 PRINTS PR00142 RecA protein signature 254 283 1.2E-85 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 Gene3D G3DSA:3.40.50.300 45 278 2.9E-83 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 Hamap MF_00268 Protein RecA [recA]. 15 340 52.301 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 Pfam PF00154 recA bacterial DNA recombination protein 17 279 1.1E-144 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 SMART SM00382 68 239 1.1E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 Gene3D G3DSA:3.30.250.10 279 337 2.6E-30 T 19-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 ProSitePatterns PS00321 recA signature. 224 232 - T 19-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 SUPERFAMILY SSF52540 14 278 3.14E-68 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 SUPERFAMILY SSF54752 279 336 2.35E-22 T 19-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal ALIDE2_RS22660 e7e78b962c4ee6dc3341a493f41d2349 369 PANTHER PTHR22942:SF1 9 346 1.1E-204 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ALIDE2_RS11350 e7c23d09e1ee1b64f1d71ed74e971f75 188 Pfam PF00849 RNA pseudouridylate synthase 7 152 3.9E-14 T 19-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS11350 e7c23d09e1ee1b64f1d71ed74e971f75 188 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 42 56 - T 19-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ALIDE2_RS11350 e7c23d09e1ee1b64f1d71ed74e971f75 188 SUPERFAMILY SSF55120 6 179 6.4E-40 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS11350 e7c23d09e1ee1b64f1d71ed74e971f75 188 PANTHER PTHR21600 6 108 3.0E-73 T 19-04-2016 ALIDE2_RS11350 e7c23d09e1ee1b64f1d71ed74e971f75 188 PANTHER PTHR21600 126 178 3.0E-73 T 19-04-2016 ALIDE2_RS11350 e7c23d09e1ee1b64f1d71ed74e971f75 188 PANTHER PTHR21600:SF23 6 108 3.0E-73 T 19-04-2016 ALIDE2_RS11350 e7c23d09e1ee1b64f1d71ed74e971f75 188 PANTHER PTHR21600:SF23 126 178 3.0E-73 T 19-04-2016 ALIDE2_RS11350 e7c23d09e1ee1b64f1d71ed74e971f75 188 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 11 181 2.7E-49 T 19-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ALIDE2_RS05050 41cf96788d1b0ac35cffc29ba955c23f 293 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 123 288 2.1E-56 T 19-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 ALIDE2_RS05050 41cf96788d1b0ac35cffc29ba955c23f 293 PANTHER PTHR32179 25 291 2.5E-113 T 19-04-2016 ALIDE2_RS05050 41cf96788d1b0ac35cffc29ba955c23f 293 SUPERFAMILY SSF51690 123 290 4.32E-57 T 19-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 ALIDE2_RS05050 41cf96788d1b0ac35cffc29ba955c23f 293 Gene3D G3DSA:3.20.20.70 144 278 1.3E-54 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS05050 41cf96788d1b0ac35cffc29ba955c23f 293 SUPERFAMILY SSF54675 20 121 5.42E-31 T 19-04-2016 ALIDE2_RS05050 41cf96788d1b0ac35cffc29ba955c23f 293 Gene3D G3DSA:3.90.1170.20 22 143 1.8E-47 T 19-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 ALIDE2_RS05050 41cf96788d1b0ac35cffc29ba955c23f 293 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 33 121 4.4E-27 T 19-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 ALIDE2_RS05050 41cf96788d1b0ac35cffc29ba955c23f 293 PIRSF PIRSF006250 15 292 1.6E-92 T 19-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD ALIDE2_RS05050 41cf96788d1b0ac35cffc29ba955c23f 293 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 25 288 1.3E-93 T 19-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 ALIDE2_RS12525 f70d6c75740f5f95eba574bf085fd4d2 224 PANTHER PTHR26402 1 221 2.2E-71 T 19-04-2016 ALIDE2_RS12525 f70d6c75740f5f95eba574bf085fd4d2 224 SMART SM00448 1 112 5.0E-34 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS12525 f70d6c75740f5f95eba574bf085fd4d2 224 Gene3D G3DSA:1.10.10.10 124 217 4.9E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12525 f70d6c75740f5f95eba574bf085fd4d2 224 SMART SM00862 145 216 5.5E-24 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS12525 f70d6c75740f5f95eba574bf085fd4d2 224 SUPERFAMILY SSF52172 1 172 4.38E-35 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS12525 f70d6c75740f5f95eba574bf085fd4d2 224 PANTHER PTHR26402:SF518 1 221 2.2E-71 T 19-04-2016 ALIDE2_RS12525 f70d6c75740f5f95eba574bf085fd4d2 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 3.2E-20 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS12525 f70d6c75740f5f95eba574bf085fd4d2 224 Pfam PF00072 Response regulator receiver domain 3 112 8.2E-22 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS12525 f70d6c75740f5f95eba574bf085fd4d2 224 Gene3D G3DSA:3.40.50.2300 1 120 4.2E-34 T 19-04-2016 ALIDE2_RS15180 ec4d4702a574f5c15f8fdbf8df7a8ac0 271 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 11 83 2.1E-22 T 19-04-2016 IPR025161 Putative transposase IS4/IS5 family ALIDE2_RS15180 ec4d4702a574f5c15f8fdbf8df7a8ac0 271 PANTHER PTHR30007 1 260 8.0E-127 T 19-04-2016 ALIDE2_RS15180 ec4d4702a574f5c15f8fdbf8df7a8ac0 271 Pfam PF01609 Transposase DDE domain 117 255 5.7E-20 T 19-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS15180 ec4d4702a574f5c15f8fdbf8df7a8ac0 271 PANTHER PTHR30007:SF17 1 260 8.0E-127 T 19-04-2016 ALIDE2_RS04570 545afd829baf073a37a37e33680caa7b 243 PANTHER PTHR10108 3 242 7.9E-132 T 19-04-2016 ALIDE2_RS04570 545afd829baf073a37a37e33680caa7b 243 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 20 242 4.1E-77 T 19-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 ALIDE2_RS04570 545afd829baf073a37a37e33680caa7b 243 Gene3D G3DSA:3.40.50.150 19 236 2.2E-50 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS04570 545afd829baf073a37a37e33680caa7b 243 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 242 3.2E-84 T 19-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 ALIDE2_RS04570 545afd829baf073a37a37e33680caa7b 243 PANTHER PTHR10108:SF864 3 242 7.9E-132 T 19-04-2016 ALIDE2_RS04570 545afd829baf073a37a37e33680caa7b 243 SUPERFAMILY SSF53335 9 237 1.32E-42 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS04570 545afd829baf073a37a37e33680caa7b 243 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 31 46 - T 19-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 ALIDE2_RS04570 545afd829baf073a37a37e33680caa7b 243 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 11 242 36.314 T 19-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 ALIDE2_RS17905 4619406e16b877edb70765f216b50063 463 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 155 175 - T 19-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 ALIDE2_RS17905 4619406e16b877edb70765f216b50063 463 PANTHER PTHR11918:SF57 6 463 2.9E-202 T 19-04-2016 ALIDE2_RS17905 4619406e16b877edb70765f216b50063 463 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 12 460 1.3E-161 T 19-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 ALIDE2_RS17905 4619406e16b877edb70765f216b50063 463 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 12 460 1.7E-95 T 19-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 ALIDE2_RS17905 4619406e16b877edb70765f216b50063 463 Gene3D G3DSA:3.80.30.20 149 392 7.2E-67 T 19-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe ALIDE2_RS17905 4619406e16b877edb70765f216b50063 463 PANTHER PTHR11918 6 463 2.9E-202 T 19-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein ALIDE2_RS17905 4619406e16b877edb70765f216b50063 463 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 11 462 58.694 T 19-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 ALIDE2_RS17905 4619406e16b877edb70765f216b50063 463 SUPERFAMILY SSF102114 147 384 2.35E-46 T 19-04-2016 ALIDE2_RS17905 4619406e16b877edb70765f216b50063 463 Pfam PF04055 Radical SAM superfamily 157 338 2.2E-27 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ALIDE2_RS17905 4619406e16b877edb70765f216b50063 463 Pfam PF00919 Uncharacterized protein family UPF0004 12 90 1.9E-19 T 19-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 ALIDE2_RS17905 4619406e16b877edb70765f216b50063 463 Gene3D G3DSA:2.40.50.140 395 463 6.1E-19 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS17905 4619406e16b877edb70765f216b50063 463 SMART SM00729 151 380 6.6E-48 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ALIDE2_RS19330 0890d5b17499409f0a83c8c249a9bff2 218 SMART SM00448 1 112 3.9E-36 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS19330 0890d5b17499409f0a83c8c249a9bff2 218 SMART SM00862 145 216 1.5E-20 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS19330 0890d5b17499409f0a83c8c249a9bff2 218 Gene3D G3DSA:1.10.10.10 124 216 8.0E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS19330 0890d5b17499409f0a83c8c249a9bff2 218 Pfam PF00072 Response regulator receiver domain 4 113 4.1E-26 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS19330 0890d5b17499409f0a83c8c249a9bff2 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 215 5.2E-18 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS19330 0890d5b17499409f0a83c8c249a9bff2 218 Gene3D G3DSA:3.40.50.2300 1 123 5.9E-37 T 19-04-2016 ALIDE2_RS19330 0890d5b17499409f0a83c8c249a9bff2 218 PANTHER PTHR26402 1 216 3.3E-88 T 19-04-2016 ALIDE2_RS19330 0890d5b17499409f0a83c8c249a9bff2 218 SUPERFAMILY SSF52172 1 175 9.82E-38 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS19330 0890d5b17499409f0a83c8c249a9bff2 218 PANTHER PTHR26402:SF279 1 216 3.3E-88 T 19-04-2016 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 Gene3D G3DSA:3.10.20.30 296 388 3.3E-25 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 SUPERFAMILY SSF52343 498 630 1.57E-38 T 19-04-2016 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 335 343 - T 19-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 Gene3D G3DSA:3.40.50.80 498 630 4.5E-38 T 19-04-2016 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 SUPERFAMILY SSF54292 286 387 7.87E-24 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 PRINTS PR00410 Phenol hydroxylase reductase family signature 505 524 2.4E-20 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 PRINTS PR00410 Phenol hydroxylase reductase family signature 530 539 2.4E-20 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 PRINTS PR00410 Phenol hydroxylase reductase family signature 430 442 2.4E-20 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 PRINTS PR00410 Phenol hydroxylase reductase family signature 490 499 2.4E-20 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 PRINTS PR00410 Phenol hydroxylase reductase family signature 446 453 2.4E-20 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 PRINTS PR00410 Phenol hydroxylase reductase family signature 597 605 2.4E-20 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 SUPERFAMILY SSF81342 17 212 3.61E-32 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 307 379 1.3E-12 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 Pfam PF00033 Cytochrome b/b6/petB 26 202 1.0E-16 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 Gene3D G3DSA:2.40.30.10 401 497 2.1E-30 T 19-04-2016 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 Pfam PF00175 Oxidoreductase NAD-binding domain 506 610 3.4E-21 T 19-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 Gene3D G3DSA:1.20.810.10 19 287 9.3E-30 T 19-04-2016 IPR027387 Cytochrome b/b6-like domain ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 Pfam PF00970 Oxidoreductase FAD-binding domain 403 495 4.0E-18 T 19-04-2016 IPR008333 Oxidoreductase, FAD-binding domain ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 PANTHER PTHR19370 330 630 1.9E-62 T 19-04-2016 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 PANTHER PTHR19370:SF68 330 630 1.9E-62 T 19-04-2016 ALIDE2_RS19345 fb4273ef4c387b8f8ef069f0434c1572 642 SUPERFAMILY SSF63380 401 496 5.73E-27 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ALIDE2_RS04110 71085f02db9c9d400b23dd6cb04847fa 251 PANTHER PTHR30413:SF2 4 251 1.1E-64 T 19-04-2016 ALIDE2_RS04110 71085f02db9c9d400b23dd6cb04847fa 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 191 210 8.3E-11 T 19-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ALIDE2_RS04110 71085f02db9c9d400b23dd6cb04847fa 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 171 190 8.3E-11 T 19-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ALIDE2_RS04110 71085f02db9c9d400b23dd6cb04847fa 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 53 75 8.3E-11 T 19-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ALIDE2_RS04110 71085f02db9c9d400b23dd6cb04847fa 251 Pfam PF01061 ABC-2 type transporter 4 214 1.2E-33 T 19-04-2016 IPR013525 ABC-2 type transporter GO:0016020 ALIDE2_RS04110 71085f02db9c9d400b23dd6cb04847fa 251 PANTHER PTHR30413 4 251 1.1E-64 T 19-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ALIDE2_RS04110 71085f02db9c9d400b23dd6cb04847fa 251 PIRSF PIRSF006648 5 248 1.9E-21 T 19-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 SUPERFAMILY SSF49503 55 198 1.49E-40 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 Pfam PF07732 Multicopper oxidase 67 177 1.0E-39 T 19-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 14 605 1.2E-262 T 19-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 Gene3D G3DSA:2.60.40.420 58 176 4.8E-35 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 PANTHER PTHR11709:SF33 62 221 3.5E-102 T 19-04-2016 ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 PANTHER PTHR11709:SF33 262 374 3.5E-102 T 19-04-2016 ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 PANTHER PTHR11709:SF33 456 605 3.5E-102 T 19-04-2016 ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 Pfam PF07731 Multicopper oxidase 492 605 8.1E-22 T 19-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 ProSitePatterns PS00079 Multicopper oxidases signature 1. 152 172 - T 19-04-2016 IPR033138 Multicopper oxidases, conserved site ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 ProSitePatterns PS00079 Multicopper oxidases signature 1. 583 603 - T 19-04-2016 IPR033138 Multicopper oxidases, conserved site ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 SUPERFAMILY SSF49503 445 605 1.99E-31 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 Gene3D G3DSA:2.60.40.420 486 605 1.2E-29 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 Gene3D G3DSA:2.60.40.420 185 385 9.9E-46 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 SUPERFAMILY SSF49503 184 389 1.82E-47 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 ProSitePatterns PS00080 Multicopper oxidases signature 2. 588 599 - T 19-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 Pfam PF00394 Multicopper oxidase 187 363 6.4E-28 T 19-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 PANTHER PTHR11709 62 221 3.5E-102 T 19-04-2016 ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 PANTHER PTHR11709 262 374 3.5E-102 T 19-04-2016 ALIDE2_RS10890 7b3299f49d98fdd3ec59100c0d22a758 606 PANTHER PTHR11709 456 605 3.5E-102 T 19-04-2016 ALIDE2_RS21415 b6ff211cfb57813a26935ee08da41ad4 198 SUPERFAMILY SSF55961 1 144 7.25E-38 T 19-04-2016 ALIDE2_RS21415 b6ff211cfb57813a26935ee08da41ad4 198 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 5 141 3.7E-40 T 19-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G ALIDE2_RS21415 b6ff211cfb57813a26935ee08da41ad4 198 PANTHER PTHR38588:SF1 2 158 2.9E-38 T 19-04-2016 ALIDE2_RS21415 b6ff211cfb57813a26935ee08da41ad4 198 Gene3D G3DSA:3.30.530.20 1 151 2.2E-56 T 19-04-2016 IPR023393 START-like domain ALIDE2_RS21415 b6ff211cfb57813a26935ee08da41ad4 198 PANTHER PTHR38588 2 158 2.9E-38 T 19-04-2016 ALIDE2_RS12315 3dafd103c15a14ac51026ed9cb16a441 316 PANTHER PTHR11082 1 296 3.9E-137 T 19-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ALIDE2_RS12315 3dafd103c15a14ac51026ed9cb16a441 316 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 315 47.338 T 19-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 ALIDE2_RS12315 3dafd103c15a14ac51026ed9cb16a441 316 PANTHER PTHR11082:SF29 1 296 3.9E-137 T 19-04-2016 ALIDE2_RS12315 3dafd103c15a14ac51026ed9cb16a441 316 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 82 100 - T 19-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 ALIDE2_RS12315 3dafd103c15a14ac51026ed9cb16a441 316 Gene3D G3DSA:3.20.20.70 2 240 1.6E-73 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS12315 3dafd103c15a14ac51026ed9cb16a441 316 SUPERFAMILY SSF51395 2 296 6.6E-68 T 19-04-2016 ALIDE2_RS12315 3dafd103c15a14ac51026ed9cb16a441 316 PIRSF PIRSF006621 1 310 6.3E-74 T 19-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ALIDE2_RS12315 3dafd103c15a14ac51026ed9cb16a441 316 Pfam PF01207 Dihydrouridine synthase (Dus) 3 299 3.3E-77 T 19-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ALIDE2_RS12315 3dafd103c15a14ac51026ed9cb16a441 316 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 309 4.8E-126 T 19-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 SUPERFAMILY SSF50692 1096 1251 1.54E-46 T 19-04-2016 IPR009010 Aspartate decarboxylase-like domain ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 Gene3D G3DSA:2.40.40.20 1071 1251 2.7E-42 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 Gene3D G3DSA:3.40.50.740 108 203 2.6E-5 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 Gene3D G3DSA:3.90.55.10 796 852 1.9E-7 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 Gene3D G3DSA:4.10.1200.10 1 25 4.6E-13 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 SMART SM00926 43 105 4.0E-8 T 19-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1252 0.0 T 19-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 Pfam PF01568 Molydopterin dinucleotide binding domain 1104 1219 1.3E-23 T 19-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 793 810 - T 19-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 PANTHER PTHR11615:SF165 868 893 0.0 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 PANTHER PTHR11615:SF165 714 852 0.0 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 PANTHER PTHR11615:SF165 1012 1246 0.0 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 PANTHER PTHR11615:SF165 34 417 0.0 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 Gene3D G3DSA:3.40.228.10 509 609 1.8E-78 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 Gene3D G3DSA:3.40.228.10 218 336 1.8E-78 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 Gene3D G3DSA:3.40.50.740 610 795 1.0E-66 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 9.1E-18 T 19-04-2016 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 Gene3D G3DSA:2.20.25.90 52 98 1.4E-31 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1142 1169 - T 19-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 Pfam PF00384 Molybdopterin oxidoreductase 108 848 3.0E-158 T 19-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 SUPERFAMILY SSF53706 3 1086 0.0 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 PANTHER PTHR11615 868 893 0.0 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 PANTHER PTHR11615 714 852 0.0 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 PANTHER PTHR11615 1012 1246 0.0 T 19-04-2016 ALIDE2_RS02325 fc7970eed81747cbe710238b946afa12 1264 PANTHER PTHR11615 34 417 0.0 T 19-04-2016 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 838 854 1.24E-75 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 671 686 1.24E-75 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 868 881 1.24E-75 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 648 670 1.24E-75 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 716 1.24E-75 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 1.24E-75 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 784 795 1.24E-75 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 723 736 1.24E-75 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 747 772 1.24E-75 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 SUPERFAMILY SSF56672 519 921 2.22E-152 T 19-04-2016 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 ProSitePatterns PS00447 DNA polymerase family A signature. 747 766 - T 19-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 Gene3D G3DSA:1.10.150.20 189 248 1.1E-23 T 19-04-2016 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 SMART SM00279 175 210 1.8E-11 T 19-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 SMART SM00474 325 511 2.7E-29 T 19-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 Gene3D G3DSA:3.40.50.1010 5 188 3.0E-66 T 19-04-2016 IPR029060 PIN domain-like ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 Gene3D G3DSA:3.30.420.10 324 535 3.2E-74 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 SMART SM00482 679 885 1.1E-108 T 19-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 Pfam PF01612 3'-5' exonuclease 325 511 2.1E-33 T 19-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 Gene3D G3DSA:1.20.1060.10 536 655 9.1E-36 T 19-04-2016 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 PANTHER PTHR10133:SF27 311 920 0.0 T 19-04-2016 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 PANTHER PTHR10133:SF27 5 289 0.0 T 19-04-2016 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 Gene3D G3DSA:3.30.70.370 812 921 1.1E-61 T 19-04-2016 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 Gene3D G3DSA:3.30.70.370 656 704 1.1E-61 T 19-04-2016 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 SUPERFAMILY SSF47807 173 292 1.18E-28 T 19-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 Pfam PF00476 DNA polymerase family A 544 918 5.2E-149 T 19-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 SUPERFAMILY SSF53098 325 511 4.45E-51 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 173 258 4.9E-24 T 19-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 Gene3D G3DSA:1.10.150.20 705 811 4.0E-35 T 19-04-2016 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 172 2.7E-48 T 19-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 TIGRFAM TIGR00593 pola: DNA polymerase I 7 921 6.2E-261 T 19-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 PANTHER PTHR10133 311 920 0.0 T 19-04-2016 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 PANTHER PTHR10133 5 289 0.0 T 19-04-2016 ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 SUPERFAMILY SSF88723 5 172 6.38E-53 T 19-04-2016 IPR029060 PIN domain-like ALIDE2_RS18045 4276ef058d508d7895eb27f79339172e 921 SMART SM00475 4 269 1.6E-106 T 19-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 ALIDE2_RS21730 edd5148a34780a8395575d74843d97b6 238 SMART SM00986 65 233 1.2E-30 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like ALIDE2_RS21730 edd5148a34780a8395575d74843d97b6 238 PANTHER PTHR11264 6 229 1.9E-87 T 19-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 ALIDE2_RS21730 edd5148a34780a8395575d74843d97b6 238 Pfam PF03167 Uracil DNA glycosylase superfamily 67 233 7.3E-20 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like ALIDE2_RS21730 edd5148a34780a8395575d74843d97b6 238 SMART SM00987 65 233 1.2E-30 T 19-04-2016 ALIDE2_RS21730 edd5148a34780a8395575d74843d97b6 238 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 22 238 32.434 T 19-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 ALIDE2_RS21730 edd5148a34780a8395575d74843d97b6 238 SUPERFAMILY SSF52141 21 237 4.8E-70 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like ALIDE2_RS21730 edd5148a34780a8395575d74843d97b6 238 Gene3D G3DSA:3.40.470.10 19 237 3.2E-76 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like ALIDE2_RS21730 edd5148a34780a8395575d74843d97b6 238 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 24 237 2.8E-65 T 19-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 ALIDE2_RS21730 edd5148a34780a8395575d74843d97b6 238 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 73 82 - T 19-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 ALIDE2_RS18340 b826fa68def67e1762b0e58a245a40b5 332 Gene3D G3DSA:1.10.150.130 30 99 5.0E-4 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS18340 b826fa68def67e1762b0e58a245a40b5 332 TIGRFAM TIGR02249 integrase_gron: integron integrase 18 332 9.6E-143 T 19-04-2016 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS18340 b826fa68def67e1762b0e58a245a40b5 332 PANTHER PTHR30349:SF28 20 193 4.6E-117 T 19-04-2016 ALIDE2_RS18340 b826fa68def67e1762b0e58a245a40b5 332 PANTHER PTHR30349:SF28 211 320 4.6E-117 T 19-04-2016 ALIDE2_RS18340 b826fa68def67e1762b0e58a245a40b5 332 PANTHER PTHR30349 20 193 4.6E-117 T 19-04-2016 ALIDE2_RS18340 b826fa68def67e1762b0e58a245a40b5 332 PANTHER PTHR30349 211 320 4.6E-117 T 19-04-2016 ALIDE2_RS18340 b826fa68def67e1762b0e58a245a40b5 332 Gene3D G3DSA:1.10.443.10 118 320 1.4E-48 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS18340 b826fa68def67e1762b0e58a245a40b5 332 SUPERFAMILY SSF56349 24 318 4.71E-46 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS18340 b826fa68def67e1762b0e58a245a40b5 332 Pfam PF00589 Phage integrase family 118 318 6.7E-47 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS18340 b826fa68def67e1762b0e58a245a40b5 332 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 18 101 2.2E-26 T 19-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 PIRSF PIRSF000770 1 238 7.4E-39 T 19-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 Gene3D G3DSA:1.10.10.10 174 236 1.5E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 235 1.3E-32 T 19-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 Pfam PF04542 Sigma-70 region 2 13 85 4.5E-17 T 19-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 PANTHER PTHR30385 10 235 3.6E-62 T 19-04-2016 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 PRINTS PR00046 Major sigma-70 factor signature 40 53 2.6E-10 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 PRINTS PR00046 Major sigma-70 factor signature 188 200 2.6E-10 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 PRINTS PR00046 Major sigma-70 factor signature 205 220 2.6E-10 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 PRINTS PR00046 Major sigma-70 factor signature 220 231 2.6E-10 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 SUPERFAMILY SSF88659 148 237 3.18E-22 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 2 238 61.927 T 19-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 Gene3D G3DSA:1.10.601.10 7 82 2.2E-15 T 19-04-2016 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 Pfam PF04539 Sigma-70 region 3 96 145 1.8E-8 T 19-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 14 236 1.1E-83 T 19-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 Gene3D G3DSA:1.10.10.10 86 130 1.8E-6 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 Pfam PF04545 Sigma-70, region 4 184 232 5.7E-17 T 19-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 PANTHER PTHR30385:SF7 10 235 3.6E-62 T 19-04-2016 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 SUPERFAMILY SSF88659 86 157 2.18E-13 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS20935 b0adb758ed5d9c00fe12e3d56a56b960 238 SUPERFAMILY SSF88946 3 85 3.53E-25 T 19-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 648 7.4E-216 T 19-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 SMART SM00436 122 217 3.0E-30 T 19-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 SUPERFAMILY SSF56712 1 604 3.01E-175 T 19-04-2016 IPR023405 DNA topoisomerase, type IA, core domain ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 5.5E-25 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 5.5E-25 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 5.5E-25 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 5.5E-25 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 519 533 5.5E-25 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 Gene3D G3DSA:3.40.50.140 1 147 4.8E-45 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 619 652 7.9E-13 T 19-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 SUPERFAMILY SSF57783 613 652 8.5E-12 T 19-04-2016 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 SMART SM00437 271 556 1.1E-61 T 19-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 Pfam PF01751 Toprim domain 3 129 3.0E-15 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 Gene3D G3DSA:3.30.65.10 618 655 9.0E-13 T 19-04-2016 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 Pfam PF01131 DNA topoisomerase 152 590 7.7E-112 T 19-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 Gene3D G3DSA:1.10.460.10 152 211 4.1E-52 T 19-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 Gene3D G3DSA:1.10.460.10 472 604 4.1E-52 T 19-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 Gene3D G3DSA:1.10.290.10 281 408 2.0E-33 T 19-04-2016 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 PANTHER PTHR11390 1 501 1.2E-157 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 PANTHER PTHR11390 519 660 1.2E-157 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 19-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 ALIDE2_RS08735 4fba9bb327f02530a4809c490a3c4ac1 671 SMART SM00493 1 122 7.7E-22 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS22945 b0b8e2363615a7f449db12ff404fd462 553 PANTHER PTHR30003 1 551 7.0E-244 T 19-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 ALIDE2_RS22945 b0b8e2363615a7f449db12ff404fd462 553 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 5 543 4.1E-159 T 19-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 ALIDE2_RS22945 b0b8e2363615a7f449db12ff404fd462 553 Pfam PF02652 L-lactate permease 16 540 6.7E-157 T 19-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 ALIDE2_RS22945 b0b8e2363615a7f449db12ff404fd462 553 PANTHER PTHR30003:SF0 1 551 7.0E-244 T 19-04-2016 ALIDE2_RS17250 d776a002146bff0e17e0c917806a6ba7 152 Gene3D G3DSA:1.10.1660.10 63 136 1.6E-20 T 19-04-2016 ALIDE2_RS17250 d776a002146bff0e17e0c917806a6ba7 152 SUPERFAMILY SSF46955 9 122 4.76E-29 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS17250 d776a002146bff0e17e0c917806a6ba7 152 SMART SM00422 8 77 1.6E-23 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS17250 d776a002146bff0e17e0c917806a6ba7 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 7.1E-8 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS17250 d776a002146bff0e17e0c917806a6ba7 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 7.1E-8 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS17250 d776a002146bff0e17e0c917806a6ba7 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 7.1E-8 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS17250 d776a002146bff0e17e0c917806a6ba7 152 Pfam PF13411 MerR HTH family regulatory protein 9 75 4.6E-18 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS17250 d776a002146bff0e17e0c917806a6ba7 152 PANTHER PTHR30204 1 122 1.9E-30 T 19-04-2016 ALIDE2_RS17250 d776a002146bff0e17e0c917806a6ba7 152 Gene3D G3DSA:1.10.1660.10 9 62 2.4E-23 T 19-04-2016 ALIDE2_RS17250 d776a002146bff0e17e0c917806a6ba7 152 PANTHER PTHR30204:SF18 1 122 1.9E-30 T 19-04-2016 ALIDE2_RS00415 5d960fa603abef6b28adcb647adf2fa3 309 PANTHER PTHR30346 1 293 1.2E-81 T 19-04-2016 ALIDE2_RS00415 5d960fa603abef6b28adcb647adf2fa3 309 Pfam PF03466 LysR substrate binding domain 87 293 3.8E-39 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS00415 5d960fa603abef6b28adcb647adf2fa3 309 Gene3D G3DSA:3.40.190.10 175 265 2.9E-25 T 19-04-2016 ALIDE2_RS00415 5d960fa603abef6b28adcb647adf2fa3 309 PANTHER PTHR30346:SF0 1 293 1.2E-81 T 19-04-2016 ALIDE2_RS00415 5d960fa603abef6b28adcb647adf2fa3 309 Gene3D G3DSA:3.40.190.10 90 174 3.8E-25 T 19-04-2016 ALIDE2_RS00415 5d960fa603abef6b28adcb647adf2fa3 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-20 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00415 5d960fa603abef6b28adcb647adf2fa3 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00415 5d960fa603abef6b28adcb647adf2fa3 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00415 5d960fa603abef6b28adcb647adf2fa3 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00415 5d960fa603abef6b28adcb647adf2fa3 309 SUPERFAMILY SSF53850 88 298 7.14E-37 T 19-04-2016 ALIDE2_RS00415 5d960fa603abef6b28adcb647adf2fa3 309 SUPERFAMILY SSF46785 1 86 1.01E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00415 5d960fa603abef6b28adcb647adf2fa3 309 Gene3D G3DSA:1.10.10.10 1 82 1.1E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS21795 a4afcce25cb0c02dee67bdd2c2d90c37 250 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 101 213 1.1E-10 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS21795 a4afcce25cb0c02dee67bdd2c2d90c37 250 Gene3D G3DSA:1.10.150.240 33 105 5.8E-8 T 19-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 ALIDE2_RS21795 a4afcce25cb0c02dee67bdd2c2d90c37 250 PANTHER PTHR18901 16 241 4.1E-47 T 19-04-2016 ALIDE2_RS21795 a4afcce25cb0c02dee67bdd2c2d90c37 250 SUPERFAMILY SSF56784 16 239 2.27E-54 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS21795 a4afcce25cb0c02dee67bdd2c2d90c37 250 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 207 1.4E-12 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS21795 a4afcce25cb0c02dee67bdd2c2d90c37 250 Pfam PF13419 Haloacid dehalogenase-like hydrolase 19 213 8.8E-33 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS21795 a4afcce25cb0c02dee67bdd2c2d90c37 250 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 19 239 2.0E-58 T 19-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 ALIDE2_RS21795 a4afcce25cb0c02dee67bdd2c2d90c37 250 PANTHER PTHR18901:SF14 16 241 4.1E-47 T 19-04-2016 ALIDE2_RS21795 a4afcce25cb0c02dee67bdd2c2d90c37 250 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 15 26 6.1E-10 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS21795 a4afcce25cb0c02dee67bdd2c2d90c37 250 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 175 195 6.1E-10 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS21795 a4afcce25cb0c02dee67bdd2c2d90c37 250 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 202 215 6.1E-10 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS21795 a4afcce25cb0c02dee67bdd2c2d90c37 250 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 173 6.1E-10 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS21795 a4afcce25cb0c02dee67bdd2c2d90c37 250 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 126 139 6.1E-10 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS21795 a4afcce25cb0c02dee67bdd2c2d90c37 250 Gene3D G3DSA:3.40.50.1000 7 32 7.4E-44 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS21795 a4afcce25cb0c02dee67bdd2c2d90c37 250 Gene3D G3DSA:3.40.50.1000 108 240 7.4E-44 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS12865 7fa3b649334442c58ac1041177659ff4 213 ProSitePatterns PS00018 EF-hand calcium-binding domain. 189 201 - T 19-04-2016 IPR018247 EF-Hand 1, calcium-binding site ALIDE2_RS12865 7fa3b649334442c58ac1041177659ff4 213 Pfam PF06078 Bacterial protein of unknown function (DUF937) 13 151 6.5E-31 T 19-04-2016 IPR009282 Protein of unknown function DUF937 ALIDE2_RS22635 71a1758bdbf7d8fc9fca141931fa9973 462 Gene3D G3DSA:3.50.50.60 18 117 2.1E-44 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22635 71a1758bdbf7d8fc9fca141931fa9973 462 Gene3D G3DSA:3.50.50.60 352 399 2.1E-44 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22635 71a1758bdbf7d8fc9fca141931fa9973 462 Gene3D G3DSA:3.50.50.60 174 249 2.1E-44 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22635 71a1758bdbf7d8fc9fca141931fa9973 462 PANTHER PTHR13847 1 442 1.5E-187 T 19-04-2016 ALIDE2_RS22635 71a1758bdbf7d8fc9fca141931fa9973 462 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 3 461 2.3E-246 T 19-04-2016 IPR017715 Putative aminophosphonate oxidoreductase ALIDE2_RS22635 71a1758bdbf7d8fc9fca141931fa9973 462 PANTHER PTHR13847:SF208 1 442 1.5E-187 T 19-04-2016 ALIDE2_RS22635 71a1758bdbf7d8fc9fca141931fa9973 462 Pfam PF01266 FAD dependent oxidoreductase 27 389 9.8E-47 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS22635 71a1758bdbf7d8fc9fca141931fa9973 462 SUPERFAMILY SSF51905 26 251 2.59E-38 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22635 71a1758bdbf7d8fc9fca141931fa9973 462 SUPERFAMILY SSF51905 352 404 2.59E-38 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22635 71a1758bdbf7d8fc9fca141931fa9973 462 Gene3D G3DSA:3.30.9.10 123 173 5.0E-5 T 19-04-2016 ALIDE2_RS22635 71a1758bdbf7d8fc9fca141931fa9973 462 Gene3D G3DSA:3.30.9.10 250 348 5.0E-5 T 19-04-2016 ALIDE2_RS13150 459fe394d754636e35c09cc7902804f2 618 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 493 614 1.9E-10 T 19-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS13150 459fe394d754636e35c09cc7902804f2 618 Gene3D G3DSA:3.40.50.300 15 171 3.6E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13150 459fe394d754636e35c09cc7902804f2 618 SUPERFAMILY SSF52540 31 227 3.17E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13150 459fe394d754636e35c09cc7902804f2 618 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 363 2.4E-123 T 19-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 ALIDE2_RS13150 459fe394d754636e35c09cc7902804f2 618 SUPERFAMILY SSF48019 249 372 1.02E-26 T 19-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 ALIDE2_RS13150 459fe394d754636e35c09cc7902804f2 618 Gene3D G3DSA:1.20.272.10 248 368 2.7E-35 T 19-04-2016 ALIDE2_RS13150 459fe394d754636e35c09cc7902804f2 618 Gene3D G3DSA:1.10.8.60 172 247 3.0E-32 T 19-04-2016 ALIDE2_RS13150 459fe394d754636e35c09cc7902804f2 618 SMART SM00382 37 184 1.5E-5 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS13150 459fe394d754636e35c09cc7902804f2 618 PANTHER PTHR11669:SF0 1 403 1.5E-157 T 19-04-2016 ALIDE2_RS13150 459fe394d754636e35c09cc7902804f2 618 Pfam PF13177 DNA polymerase III, delta subunit 20 183 1.7E-40 T 19-04-2016 ALIDE2_RS13150 459fe394d754636e35c09cc7902804f2 618 PANTHER PTHR11669 1 403 1.5E-157 T 19-04-2016 ALIDE2_RS13150 459fe394d754636e35c09cc7902804f2 618 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 238 372 3.6E-25 T 19-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 ALIDE2_RS17815 4edab7bea6c1ffb6a082f27bc8393018 358 Gene3D G3DSA:2.40.50.100 282 353 3.2E-19 T 19-04-2016 ALIDE2_RS17815 4edab7bea6c1ffb6a082f27bc8393018 358 Pfam PF00005 ABC transporter 19 161 3.6E-30 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS17815 4edab7bea6c1ffb6a082f27bc8393018 358 SMART SM00382 25 211 1.5E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS17815 4edab7bea6c1ffb6a082f27bc8393018 358 Pfam PF03459 TOBE domain 295 355 1.7E-14 T 19-04-2016 IPR005116 Transport-associated OB, type 1 ALIDE2_RS17815 4edab7bea6c1ffb6a082f27bc8393018 358 Gene3D G3DSA:3.40.50.300 18 228 9.1E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17815 4edab7bea6c1ffb6a082f27bc8393018 358 SUPERFAMILY SSF52540 8 224 4.99E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17815 4edab7bea6c1ffb6a082f27bc8393018 358 SUPERFAMILY SSF50331 239 356 2.11E-21 T 19-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal ALIDE2_RS17815 4edab7bea6c1ffb6a082f27bc8393018 358 PANTHER PTHR24220:SF284 2 226 3.5E-92 T 19-04-2016 ALIDE2_RS17815 4edab7bea6c1ffb6a082f27bc8393018 358 PANTHER PTHR24220:SF284 341 351 3.5E-92 T 19-04-2016 ALIDE2_RS17815 4edab7bea6c1ffb6a082f27bc8393018 358 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 7 356 9.1E-135 T 19-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 ALIDE2_RS17815 4edab7bea6c1ffb6a082f27bc8393018 358 PANTHER PTHR24220 2 226 3.5E-92 T 19-04-2016 ALIDE2_RS17815 4edab7bea6c1ffb6a082f27bc8393018 358 PANTHER PTHR24220 341 351 3.5E-92 T 19-04-2016 ALIDE2_RS17815 4edab7bea6c1ffb6a082f27bc8393018 358 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS12780 7569ba916ba8d9141c5924eefcb2c6f1 419 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 416 8.7E-107 T 19-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit ALIDE2_RS12780 7569ba916ba8d9141c5924eefcb2c6f1 419 PANTHER PTHR33362:SF2 1 418 2.8E-109 T 19-04-2016 ALIDE2_RS12780 7569ba916ba8d9141c5924eefcb2c6f1 419 PANTHER PTHR33362 1 418 2.8E-109 T 19-04-2016 ALIDE2_RS12780 7569ba916ba8d9141c5924eefcb2c6f1 419 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 418 1.0E-122 T 19-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 ALIDE2_RS12780 7569ba916ba8d9141c5924eefcb2c6f1 419 PIRSF PIRSF006066 1 419 2.0E-121 T 19-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 ALIDE2_RS13105 ccc06d9be2bdcbc7d852defad596966b 305 Pfam PF03466 LysR substrate binding domain 88 294 1.8E-38 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS13105 ccc06d9be2bdcbc7d852defad596966b 305 PANTHER PTHR30537:SF29 1 293 5.1E-111 T 19-04-2016 ALIDE2_RS13105 ccc06d9be2bdcbc7d852defad596966b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.5E-17 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS13105 ccc06d9be2bdcbc7d852defad596966b 305 Gene3D G3DSA:3.40.190.10 92 179 1.9E-18 T 19-04-2016 ALIDE2_RS13105 ccc06d9be2bdcbc7d852defad596966b 305 PANTHER PTHR30537 1 293 5.1E-111 T 19-04-2016 ALIDE2_RS13105 ccc06d9be2bdcbc7d852defad596966b 305 Gene3D G3DSA:1.10.10.10 3 88 1.8E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS13105 ccc06d9be2bdcbc7d852defad596966b 305 SUPERFAMILY SSF53850 88 297 5.25E-41 T 19-04-2016 ALIDE2_RS13105 ccc06d9be2bdcbc7d852defad596966b 305 Gene3D G3DSA:3.40.190.10 180 263 2.5E-17 T 19-04-2016 ALIDE2_RS13105 ccc06d9be2bdcbc7d852defad596966b 305 SUPERFAMILY SSF46785 3 88 1.69E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08525 20e5e2aee0220ed827a9bd4cd2a41024 287 Gene3D G3DSA:3.40.50.1860 8 163 2.9E-47 T 19-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS08525 20e5e2aee0220ed827a9bd4cd2a41024 287 PANTHER PTHR21198 1 275 7.9E-67 T 19-04-2016 ALIDE2_RS08525 20e5e2aee0220ed827a9bd4cd2a41024 287 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 76 84 - T 19-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS08525 20e5e2aee0220ed827a9bd4cd2a41024 287 PANTHER PTHR21198:SF2 1 275 7.9E-67 T 19-04-2016 ALIDE2_RS08525 20e5e2aee0220ed827a9bd4cd2a41024 287 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 233 1.7E-33 T 19-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS08525 20e5e2aee0220ed827a9bd4cd2a41024 287 Hamap MF_00258 Glutamate racemase [murI]. 8 277 31.579 T 19-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS08525 20e5e2aee0220ed827a9bd4cd2a41024 287 TIGRFAM TIGR00067 glut_race: glutamate racemase 10 274 8.9E-52 T 19-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS08525 20e5e2aee0220ed827a9bd4cd2a41024 287 SUPERFAMILY SSF53681 9 112 4.77E-28 T 19-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS08525 20e5e2aee0220ed827a9bd4cd2a41024 287 SUPERFAMILY SSF53681 115 278 1.24E-26 T 19-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS23010 5a2e73ed8ae8fdeda36d4e58cf598cc0 692 PANTHER PTHR33303 7 685 1.0E-133 T 19-04-2016 ALIDE2_RS23010 5a2e73ed8ae8fdeda36d4e58cf598cc0 692 Gene3D G3DSA:3.40.50.261 131 290 2.6E-22 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS23010 5a2e73ed8ae8fdeda36d4e58cf598cc0 692 Gene3D G3DSA:3.40.50.720 7 130 7.4E-36 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS23010 5a2e73ed8ae8fdeda36d4e58cf598cc0 692 SUPERFAMILY SSF51735 7 138 1.77E-33 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS23010 5a2e73ed8ae8fdeda36d4e58cf598cc0 692 SUPERFAMILY SSF52210 133 295 1.06E-34 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS23010 5a2e73ed8ae8fdeda36d4e58cf598cc0 692 PANTHER PTHR33303:SF3 7 685 1.0E-133 T 19-04-2016 ALIDE2_RS23010 5a2e73ed8ae8fdeda36d4e58cf598cc0 692 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 157 293 9.5E-41 T 19-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain ALIDE2_RS23010 5a2e73ed8ae8fdeda36d4e58cf598cc0 692 SUPERFAMILY SSF56059 473 685 2.03E-24 T 19-04-2016 ALIDE2_RS23010 5a2e73ed8ae8fdeda36d4e58cf598cc0 692 SMART SM00881 6 101 6.8E-30 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS23010 5a2e73ed8ae8fdeda36d4e58cf598cc0 692 SUPERFAMILY SSF52210 300 450 3.4E-23 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS23010 5a2e73ed8ae8fdeda36d4e58cf598cc0 692 Pfam PF13380 CoA binding domain 10 135 4.2E-23 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS23010 5a2e73ed8ae8fdeda36d4e58cf598cc0 692 Pfam PF13549 ATP-grasp domain 467 686 2.4E-38 T 19-04-2016 ALIDE2_RS19515 7da39422eb7d9eac5d71d44c6f6ecdb2 319 PANTHER PTHR30349:SF16 4 313 1.3E-67 T 19-04-2016 ALIDE2_RS19515 7da39422eb7d9eac5d71d44c6f6ecdb2 319 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 314 5.2E-70 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS19515 7da39422eb7d9eac5d71d44c6f6ecdb2 319 SUPERFAMILY SSF53850 100 278 3.91E-14 T 19-04-2016 ALIDE2_RS19515 7da39422eb7d9eac5d71d44c6f6ecdb2 319 PANTHER PTHR30349 4 313 1.3E-67 T 19-04-2016 ALIDE2_RS19515 7da39422eb7d9eac5d71d44c6f6ecdb2 319 Gene3D G3DSA:3.40.190.10 123 214 1.8E-8 T 19-04-2016 ALIDE2_RS19515 7da39422eb7d9eac5d71d44c6f6ecdb2 319 PIRSF PIRSF017082 1 318 6.2E-69 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22155 ea7e6ff5e04617fa46a784e1799627ec 200 PANTHER PTHR32552 13 195 2.3E-61 T 19-04-2016 ALIDE2_RS22155 ea7e6ff5e04617fa46a784e1799627ec 200 Gene3D G3DSA:2.170.130.10 28 170 3.2E-29 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS22155 ea7e6ff5e04617fa46a784e1799627ec 200 PANTHER PTHR32552:SF13 13 195 2.3E-61 T 19-04-2016 ALIDE2_RS22155 ea7e6ff5e04617fa46a784e1799627ec 200 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 162 5.1E-22 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS22155 ea7e6ff5e04617fa46a784e1799627ec 200 SUPERFAMILY SSF56935 28 193 8.24E-36 T 19-04-2016 ALIDE2_RS18455 a4eb02da69702a4fdff31c5db8d692af 269 SUPERFAMILY SSF161098 11 260 7.06E-48 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18455 a4eb02da69702a4fdff31c5db8d692af 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 260 2.1E-16 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18455 a4eb02da69702a4fdff31c5db8d692af 269 PANTHER PTHR30193 15 269 1.3E-34 T 19-04-2016 ALIDE2_RS18455 a4eb02da69702a4fdff31c5db8d692af 269 PANTHER PTHR30193:SF20 15 269 1.3E-34 T 19-04-2016 ALIDE2_RS18455 a4eb02da69702a4fdff31c5db8d692af 269 Gene3D G3DSA:1.10.3720.10 13 260 1.0E-41 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS19335 3c4b4f133176f1df05b7cbc2edfa43c4 458 SMART SM00387 337 450 1.8E-27 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS19335 3c4b4f133176f1df05b7cbc2edfa43c4 458 PANTHER PTHR24423:SF474 164 438 1.1E-70 T 19-04-2016 ALIDE2_RS19335 3c4b4f133176f1df05b7cbc2edfa43c4 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 287 2.5E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS19335 3c4b4f133176f1df05b7cbc2edfa43c4 458 Gene3D G3DSA:3.30.565.10 296 448 1.8E-35 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS19335 3c4b4f133176f1df05b7cbc2edfa43c4 458 PANTHER PTHR24423 164 438 1.1E-70 T 19-04-2016 ALIDE2_RS19335 3c4b4f133176f1df05b7cbc2edfa43c4 458 SUPERFAMILY SSF55874 278 446 1.02E-32 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS19335 3c4b4f133176f1df05b7cbc2edfa43c4 458 SUPERFAMILY SSF47384 206 287 3.14E-15 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS19335 3c4b4f133176f1df05b7cbc2edfa43c4 458 SMART SM00388 223 288 5.8E-13 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS19335 3c4b4f133176f1df05b7cbc2edfa43c4 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 1.3E-6 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS19335 3c4b4f133176f1df05b7cbc2edfa43c4 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 1.3E-6 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS19335 3c4b4f133176f1df05b7cbc2edfa43c4 458 Gene3D G3DSA:1.10.287.130 215 284 1.6E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS19335 3c4b4f133176f1df05b7cbc2edfa43c4 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 446 2.4E-16 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS15915 2c04caaf431eb41099dcc5f12a6c2394 321 SUPERFAMILY SSF53850 98 284 5.02E-13 T 19-04-2016 ALIDE2_RS15915 2c04caaf431eb41099dcc5f12a6c2394 321 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 317 3.0E-83 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS15915 2c04caaf431eb41099dcc5f12a6c2394 321 PANTHER PTHR30349 6 313 1.4E-85 T 19-04-2016 ALIDE2_RS15915 2c04caaf431eb41099dcc5f12a6c2394 321 PIRSF PIRSF017082 5 320 3.6E-76 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS15915 2c04caaf431eb41099dcc5f12a6c2394 321 PANTHER PTHR30349:SF16 6 313 1.4E-85 T 19-04-2016 ALIDE2_RS10820 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215:SF3 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS10820 0e273aa785c5f1cc600fcc12dd66d8db 107 Gene3D G3DSA:1.10.10.60 8 94 1.2E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS10820 0e273aa785c5f1cc600fcc12dd66d8db 107 Pfam PF01527 Transposase 1 86 5.1E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS10820 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS10820 0e273aa785c5f1cc600fcc12dd66d8db 107 SUPERFAMILY SSF46689 4 98 2.69E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS13685 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215:SF3 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS13685 0e273aa785c5f1cc600fcc12dd66d8db 107 Gene3D G3DSA:1.10.10.60 8 94 1.2E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS13685 0e273aa785c5f1cc600fcc12dd66d8db 107 Pfam PF01527 Transposase 1 86 5.1E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS13685 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS13685 0e273aa785c5f1cc600fcc12dd66d8db 107 SUPERFAMILY SSF46689 4 98 2.69E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS21755 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215:SF3 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS21755 0e273aa785c5f1cc600fcc12dd66d8db 107 Gene3D G3DSA:1.10.10.60 8 94 1.2E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS21755 0e273aa785c5f1cc600fcc12dd66d8db 107 Pfam PF01527 Transposase 1 86 5.1E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS21755 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS21755 0e273aa785c5f1cc600fcc12dd66d8db 107 SUPERFAMILY SSF46689 4 98 2.69E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS20425 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215:SF3 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS20425 0e273aa785c5f1cc600fcc12dd66d8db 107 Gene3D G3DSA:1.10.10.60 8 94 1.2E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS20425 0e273aa785c5f1cc600fcc12dd66d8db 107 Pfam PF01527 Transposase 1 86 5.1E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS20425 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS20425 0e273aa785c5f1cc600fcc12dd66d8db 107 SUPERFAMILY SSF46689 4 98 2.69E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS15175 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215:SF3 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS15175 0e273aa785c5f1cc600fcc12dd66d8db 107 Gene3D G3DSA:1.10.10.60 8 94 1.2E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS15175 0e273aa785c5f1cc600fcc12dd66d8db 107 Pfam PF01527 Transposase 1 86 5.1E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS15175 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS15175 0e273aa785c5f1cc600fcc12dd66d8db 107 SUPERFAMILY SSF46689 4 98 2.69E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS10350 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215:SF3 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS10350 0e273aa785c5f1cc600fcc12dd66d8db 107 Gene3D G3DSA:1.10.10.60 8 94 1.2E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS10350 0e273aa785c5f1cc600fcc12dd66d8db 107 Pfam PF01527 Transposase 1 86 5.1E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS10350 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS10350 0e273aa785c5f1cc600fcc12dd66d8db 107 SUPERFAMILY SSF46689 4 98 2.69E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS04790 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215:SF3 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS04790 0e273aa785c5f1cc600fcc12dd66d8db 107 Gene3D G3DSA:1.10.10.60 8 94 1.2E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS04790 0e273aa785c5f1cc600fcc12dd66d8db 107 Pfam PF01527 Transposase 1 86 5.1E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS04790 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS04790 0e273aa785c5f1cc600fcc12dd66d8db 107 SUPERFAMILY SSF46689 4 98 2.69E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS00050 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215:SF3 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS00050 0e273aa785c5f1cc600fcc12dd66d8db 107 Gene3D G3DSA:1.10.10.60 8 94 1.2E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS00050 0e273aa785c5f1cc600fcc12dd66d8db 107 Pfam PF01527 Transposase 1 86 5.1E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS00050 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS00050 0e273aa785c5f1cc600fcc12dd66d8db 107 SUPERFAMILY SSF46689 4 98 2.69E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS21390 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215:SF3 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS21390 0e273aa785c5f1cc600fcc12dd66d8db 107 Gene3D G3DSA:1.10.10.60 8 94 1.2E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS21390 0e273aa785c5f1cc600fcc12dd66d8db 107 Pfam PF01527 Transposase 1 86 5.1E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS21390 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS21390 0e273aa785c5f1cc600fcc12dd66d8db 107 SUPERFAMILY SSF46689 4 98 2.69E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS17505 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215:SF3 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS17505 0e273aa785c5f1cc600fcc12dd66d8db 107 Gene3D G3DSA:1.10.10.60 8 94 1.2E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS17505 0e273aa785c5f1cc600fcc12dd66d8db 107 Pfam PF01527 Transposase 1 86 5.1E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS17505 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS17505 0e273aa785c5f1cc600fcc12dd66d8db 107 SUPERFAMILY SSF46689 4 98 2.69E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS04420 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215:SF3 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS04420 0e273aa785c5f1cc600fcc12dd66d8db 107 Gene3D G3DSA:1.10.10.60 8 94 1.2E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS04420 0e273aa785c5f1cc600fcc12dd66d8db 107 Pfam PF01527 Transposase 1 86 5.1E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS04420 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS04420 0e273aa785c5f1cc600fcc12dd66d8db 107 SUPERFAMILY SSF46689 4 98 2.69E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS13380 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215:SF3 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS13380 0e273aa785c5f1cc600fcc12dd66d8db 107 Gene3D G3DSA:1.10.10.60 8 94 1.2E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS13380 0e273aa785c5f1cc600fcc12dd66d8db 107 Pfam PF01527 Transposase 1 86 5.1E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS13380 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS13380 0e273aa785c5f1cc600fcc12dd66d8db 107 SUPERFAMILY SSF46689 4 98 2.69E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS07795 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215:SF3 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS07795 0e273aa785c5f1cc600fcc12dd66d8db 107 Gene3D G3DSA:1.10.10.60 8 94 1.2E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS07795 0e273aa785c5f1cc600fcc12dd66d8db 107 Pfam PF01527 Transposase 1 86 5.1E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS07795 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS07795 0e273aa785c5f1cc600fcc12dd66d8db 107 SUPERFAMILY SSF46689 4 98 2.69E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS01080 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215:SF3 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS01080 0e273aa785c5f1cc600fcc12dd66d8db 107 Gene3D G3DSA:1.10.10.60 8 94 1.2E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS01080 0e273aa785c5f1cc600fcc12dd66d8db 107 Pfam PF01527 Transposase 1 86 5.1E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS01080 0e273aa785c5f1cc600fcc12dd66d8db 107 PANTHER PTHR33215 1 106 3.1E-26 T 19-04-2016 ALIDE2_RS01080 0e273aa785c5f1cc600fcc12dd66d8db 107 SUPERFAMILY SSF46689 4 98 2.69E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS20750 7e229f5b27df659943646033377046ab 369 PIRSF PIRSF000876 2 363 5.1E-133 T 19-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ALIDE2_RS20750 7e229f5b27df659943646033377046ab 369 PANTHER PTHR24421 4 359 4.0E-150 T 19-04-2016 ALIDE2_RS20750 7e229f5b27df659943646033377046ab 369 Pfam PF00072 Response regulator receiver domain 7 109 1.2E-23 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20750 7e229f5b27df659943646033377046ab 369 SUPERFAMILY SSF52172 4 109 2.13E-28 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS20750 7e229f5b27df659943646033377046ab 369 Pfam PF01339 CheB methylesterase 176 354 2.6E-58 T 19-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ALIDE2_RS20750 7e229f5b27df659943646033377046ab 369 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 359 40.453 T 19-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ALIDE2_RS20750 7e229f5b27df659943646033377046ab 369 SUPERFAMILY SSF52738 172 360 1.02E-70 T 19-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ALIDE2_RS20750 7e229f5b27df659943646033377046ab 369 Gene3D G3DSA:3.40.50.2300 4 109 1.8E-29 T 19-04-2016 ALIDE2_RS20750 7e229f5b27df659943646033377046ab 369 SMART SM00448 5 124 2.2E-22 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20750 7e229f5b27df659943646033377046ab 369 Gene3D G3DSA:3.40.50.180 172 359 1.1E-79 T 19-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ALIDE2_RS20750 7e229f5b27df659943646033377046ab 369 PANTHER PTHR24421:SF21 4 359 4.0E-150 T 19-04-2016 ALIDE2_RS12565 824dadc66d344a76b31f0482c26e61d1 378 PANTHER PTHR24023 87 213 1.8E-19 T 19-04-2016 ALIDE2_RS12565 824dadc66d344a76b31f0482c26e61d1 378 PANTHER PTHR24023:SF593 87 213 1.8E-19 T 19-04-2016 ALIDE2_RS12565 824dadc66d344a76b31f0482c26e61d1 378 Pfam PF02515 CoA-transferase family III 10 369 1.2E-114 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS12565 824dadc66d344a76b31f0482c26e61d1 378 Gene3D G3DSA:3.40.50.10540 310 370 2.5E-93 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS12565 824dadc66d344a76b31f0482c26e61d1 378 Gene3D G3DSA:3.40.50.10540 7 221 2.5E-93 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS12565 824dadc66d344a76b31f0482c26e61d1 378 SUPERFAMILY SSF89796 8 370 2.49E-119 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS12565 824dadc66d344a76b31f0482c26e61d1 378 Gene3D G3DSA:3.30.1540.10 227 309 1.0E-26 T 19-04-2016 ALIDE2_RS00170 e82f92dcf45cb072e4ce6bb5bd9e8074 697 SUPERFAMILY SSF52210 307 457 1.09E-25 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS00170 e82f92dcf45cb072e4ce6bb5bd9e8074 697 PANTHER PTHR33303 454 693 2.3E-183 T 19-04-2016 ALIDE2_RS00170 e82f92dcf45cb072e4ce6bb5bd9e8074 697 PANTHER PTHR33303 2 437 2.3E-183 T 19-04-2016 ALIDE2_RS00170 e82f92dcf45cb072e4ce6bb5bd9e8074 697 Gene3D G3DSA:3.40.50.720 2 133 6.0E-33 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00170 e82f92dcf45cb072e4ce6bb5bd9e8074 697 SUPERFAMILY SSF52210 158 297 5.36E-31 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS00170 e82f92dcf45cb072e4ce6bb5bd9e8074 697 Pfam PF13380 CoA binding domain 14 137 2.6E-18 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS00170 e82f92dcf45cb072e4ce6bb5bd9e8074 697 Gene3D G3DSA:3.40.50.261 134 296 1.6E-19 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS00170 e82f92dcf45cb072e4ce6bb5bd9e8074 697 Gene3D G3DSA:3.30.470.20 483 557 3.3E-8 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS00170 e82f92dcf45cb072e4ce6bb5bd9e8074 697 Pfam PF13549 ATP-grasp domain 478 690 1.3E-62 T 19-04-2016 ALIDE2_RS00170 e82f92dcf45cb072e4ce6bb5bd9e8074 697 PANTHER PTHR33303:SF3 454 693 2.3E-183 T 19-04-2016 ALIDE2_RS00170 e82f92dcf45cb072e4ce6bb5bd9e8074 697 PANTHER PTHR33303:SF3 2 437 2.3E-183 T 19-04-2016 ALIDE2_RS00170 e82f92dcf45cb072e4ce6bb5bd9e8074 697 SUPERFAMILY SSF56059 480 693 1.11E-43 T 19-04-2016 ALIDE2_RS00170 e82f92dcf45cb072e4ce6bb5bd9e8074 697 SMART SM00881 9 104 9.2E-32 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS00170 e82f92dcf45cb072e4ce6bb5bd9e8074 697 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 161 298 1.1E-42 T 19-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain ALIDE2_RS00170 e82f92dcf45cb072e4ce6bb5bd9e8074 697 SUPERFAMILY SSF51735 1 140 1.64E-32 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS23420 ce00b600b10048516a6d81d0477bd759 190 Gene3D G3DSA:3.40.50.1000 20 179 1.2E-36 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS23420 ce00b600b10048516a6d81d0477bd759 190 SUPERFAMILY SSF56784 23 181 5.34E-36 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS23420 ce00b600b10048516a6d81d0477bd759 190 Pfam PF08282 haloacid dehalogenase-like hydrolase 102 167 2.9E-5 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS23420 ce00b600b10048516a6d81d0477bd759 190 PANTHER PTHR21485 16 175 1.7E-41 T 19-04-2016 ALIDE2_RS23420 ce00b600b10048516a6d81d0477bd759 190 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 28 178 1.7E-42 T 19-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 ALIDE2_RS23420 ce00b600b10048516a6d81d0477bd759 190 PIRSF PIRSF006118 15 189 6.1E-57 T 19-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 ALIDE2_RS06210 4b3e449998489ad74e027768395c4270 297 Gene3D G3DSA:1.10.10.10 1 80 2.4E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06210 4b3e449998489ad74e027768395c4270 297 Gene3D G3DSA:3.40.190.10 175 264 8.7E-36 T 19-04-2016 ALIDE2_RS06210 4b3e449998489ad74e027768395c4270 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.5E-20 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06210 4b3e449998489ad74e027768395c4270 297 SUPERFAMILY SSF53850 88 291 2.17E-37 T 19-04-2016 ALIDE2_RS06210 4b3e449998489ad74e027768395c4270 297 PANTHER PTHR30346:SF0 1 294 1.3E-88 T 19-04-2016 ALIDE2_RS06210 4b3e449998489ad74e027768395c4270 297 PANTHER PTHR30346 1 294 1.3E-88 T 19-04-2016 ALIDE2_RS06210 4b3e449998489ad74e027768395c4270 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.0E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06210 4b3e449998489ad74e027768395c4270 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.0E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06210 4b3e449998489ad74e027768395c4270 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.0E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06210 4b3e449998489ad74e027768395c4270 297 SUPERFAMILY SSF46785 1 81 1.49E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06210 4b3e449998489ad74e027768395c4270 297 Gene3D G3DSA:3.40.190.10 88 174 8.7E-29 T 19-04-2016 ALIDE2_RS06210 4b3e449998489ad74e027768395c4270 297 Pfam PF03466 LysR substrate binding domain 87 280 9.6E-42 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS06305 7ad4bb273ad809ef6028bb9b66e83d97 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 72 3.0E-11 T 19-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 ALIDE2_RS06305 7ad4bb273ad809ef6028bb9b66e83d97 79 SUPERFAMILY SSF47336 1 77 4.19E-24 T 19-04-2016 IPR009081 Phosphopantetheine binding ACP domain ALIDE2_RS06305 7ad4bb273ad809ef6028bb9b66e83d97 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 19-04-2016 IPR006162 Phosphopantetheine attachment site ALIDE2_RS06305 7ad4bb273ad809ef6028bb9b66e83d97 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 4.7E-35 T 19-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 ALIDE2_RS06305 7ad4bb273ad809ef6028bb9b66e83d97 79 Pfam PF00550 Phosphopantetheine attachment site 7 72 9.6E-17 T 19-04-2016 IPR009081 Phosphopantetheine binding ACP domain ALIDE2_RS06305 7ad4bb273ad809ef6028bb9b66e83d97 79 SMART SM00823 Phosphopantetheine attachment site 5 63 0.003 T 19-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 ALIDE2_RS06305 7ad4bb273ad809ef6028bb9b66e83d97 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.336 T 19-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 ALIDE2_RS06305 7ad4bb273ad809ef6028bb9b66e83d97 79 PANTHER PTHR20863 3 73 1.5E-29 T 19-04-2016 ALIDE2_RS06305 7ad4bb273ad809ef6028bb9b66e83d97 79 Gene3D G3DSA:1.10.1200.10 3 77 5.6E-35 T 19-04-2016 IPR009081 Phosphopantetheine binding ACP domain ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 SUPERFAMILY SSF51230 573 647 8.7E-18 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.2E-41 T 19-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 SMART SM00878 336 440 8.8E-53 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.1E-73 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 PANTHER PTHR18866 1 647 2.2E-262 T 19-04-2016 ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 Pfam PF00364 Biotin-requiring enzyme 583 646 4.0E-13 T 19-04-2016 IPR000089 Biotin/lipoyl attachment ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 Gene3D G3DSA:3.30.1490.20 130 202 7.1E-24 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.2E-33 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 SUPERFAMILY SSF56059 83 352 8.31E-70 T 19-04-2016 ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 SUPERFAMILY SSF52440 1 113 1.01E-42 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 Gene3D G3DSA:2.40.50.100 583 647 1.4E-18 T 19-04-2016 ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 SUPERFAMILY SSF51246 331 444 2.25E-37 T 19-04-2016 IPR011054 Rudiment single hybrid motif ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 Gene3D G3DSA:3.40.50.20 1 129 1.1E-46 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS09350 324e1364d021cf0b938b941ec01506d0 647 Gene3D G3DSA:3.30.470.20 203 447 2.0E-97 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS06115 062c90cbb7844a2ecc61dc0bf129d8e7 1978 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 528 634 1.8E-32 T 19-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain ALIDE2_RS06115 062c90cbb7844a2ecc61dc0bf129d8e7 1978 PANTHER PTHR40094 1774 1978 3.0E-61 T 19-04-2016 ALIDE2_RS06115 062c90cbb7844a2ecc61dc0bf129d8e7 1978 PANTHER PTHR40094 409 1104 3.0E-61 T 19-04-2016 ALIDE2_RS06115 062c90cbb7844a2ecc61dc0bf129d8e7 1978 PANTHER PTHR40094 1140 1748 3.0E-61 T 19-04-2016 ALIDE2_RS06115 062c90cbb7844a2ecc61dc0bf129d8e7 1978 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 1027 1210 4.8E-19 T 19-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 ALIDE2_RS06115 062c90cbb7844a2ecc61dc0bf129d8e7 1978 SMART SM01360 1268 1358 4.7E-27 T 19-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 ALIDE2_RS06115 062c90cbb7844a2ecc61dc0bf129d8e7 1978 SMART SM01359 1027 1210 8.1E-47 T 19-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 ALIDE2_RS06115 062c90cbb7844a2ecc61dc0bf129d8e7 1978 PANTHER PTHR40094:SF1 1774 1978 3.0E-61 T 19-04-2016 ALIDE2_RS06115 062c90cbb7844a2ecc61dc0bf129d8e7 1978 PANTHER PTHR40094:SF1 409 1104 3.0E-61 T 19-04-2016 ALIDE2_RS06115 062c90cbb7844a2ecc61dc0bf129d8e7 1978 PANTHER PTHR40094:SF1 1140 1748 3.0E-61 T 19-04-2016 ALIDE2_RS06115 062c90cbb7844a2ecc61dc0bf129d8e7 1978 Pfam PF00207 Alpha-2-macroglobulin family 1270 1356 3.0E-14 T 19-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 ALIDE2_RS06115 062c90cbb7844a2ecc61dc0bf129d8e7 1978 Pfam PF01835 MG2 domain 643 747 8.9E-21 T 19-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 ALIDE2_RS11360 668ffc9d173a478e646163d10a4dd2c9 467 Pfam PF10415 Fumarase C C-terminus 406 458 2.2E-18 T 19-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS11360 668ffc9d173a478e646163d10a4dd2c9 467 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.4E-29 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS11360 668ffc9d173a478e646163d10a4dd2c9 467 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 2.4E-29 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS11360 668ffc9d173a478e646163d10a4dd2c9 467 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 2.4E-29 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS11360 668ffc9d173a478e646163d10a4dd2c9 467 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 2.4E-29 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS11360 668ffc9d173a478e646163d10a4dd2c9 467 Gene3D G3DSA:1.10.275.10 1 137 2.1E-56 T 19-04-2016 IPR024083 Fumarase/histidase, N-terminal ALIDE2_RS11360 668ffc9d173a478e646163d10a4dd2c9 467 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 19-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 ALIDE2_RS11360 668ffc9d173a478e646163d10a4dd2c9 467 PANTHER PTHR11444 1 465 5.1E-224 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS11360 668ffc9d173a478e646163d10a4dd2c9 467 PANTHER PTHR11444:SF25 1 465 5.1E-224 T 19-04-2016 ALIDE2_RS11360 668ffc9d173a478e646163d10a4dd2c9 467 SUPERFAMILY SSF48557 1 456 2.04E-138 T 19-04-2016 IPR008948 L-Aspartase-like GO:0003824 ALIDE2_RS11360 668ffc9d173a478e646163d10a4dd2c9 467 Pfam PF00206 Lyase 12 340 2.2E-99 T 19-04-2016 IPR022761 Fumarate lyase, N-terminal ALIDE2_RS11360 668ffc9d173a478e646163d10a4dd2c9 467 Gene3D G3DSA:1.20.200.10 138 399 1.3E-86 T 19-04-2016 ALIDE2_RS11360 668ffc9d173a478e646163d10a4dd2c9 467 Gene3D G3DSA:1.10.40.30 406 461 7.7E-19 T 19-04-2016 ALIDE2_RS00710 280041d07ad8b6be96a624caf0f8d9d5 311 Gene3D G3DSA:3.10.129.10 146 289 2.7E-38 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS00710 280041d07ad8b6be96a624caf0f8d9d5 311 SUPERFAMILY SSF54637 168 287 2.06E-29 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS00710 280041d07ad8b6be96a624caf0f8d9d5 311 Pfam PF13452 N-terminal half of MaoC dehydratase 54 131 8.6E-9 T 19-04-2016 ALIDE2_RS00710 280041d07ad8b6be96a624caf0f8d9d5 311 Gene3D G3DSA:3.10.129.10 1 145 6.7E-39 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS00710 280041d07ad8b6be96a624caf0f8d9d5 311 SUPERFAMILY SSF54637 11 159 2.55E-33 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS00710 280041d07ad8b6be96a624caf0f8d9d5 311 Pfam PF01575 MaoC like domain 168 271 1.9E-25 T 19-04-2016 IPR002539 MaoC-like domain ALIDE2_RS00710 280041d07ad8b6be96a624caf0f8d9d5 311 PANTHER PTHR13078 1 296 5.4E-98 T 19-04-2016 ALIDE2_RS01410 8bc7ece5f8e4fbc8070e4df1396f02df 262 SUPERFAMILY SSF56529 3 261 4.19E-76 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS01410 8bc7ece5f8e4fbc8070e4df1396f02df 262 PANTHER PTHR30143 1 261 4.9E-68 T 19-04-2016 ALIDE2_RS01410 8bc7ece5f8e4fbc8070e4df1396f02df 262 TIGRFAM TIGR03218 catechol_dmpH: 4-oxalocrotonate decarboxylase 1 261 5.4E-142 T 19-04-2016 IPR017630 4-oxalocrotonate decarboxylase KEGG: 00362+4.1.1.77|KEGG: 00621+4.1.1.77|KEGG: 00622+4.1.1.77|MetaCyc: PWY-5419|MetaCyc: PWY-5647|MetaCyc: PWY-5654|MetaCyc: PWY-6210|MetaCyc: PWY-6214|MetaCyc: PWY-6336|MetaCyc: PWY-7006|MetaCyc: PWY-7480 ALIDE2_RS01410 8bc7ece5f8e4fbc8070e4df1396f02df 262 Gene3D G3DSA:3.90.850.10 4 261 3.4E-81 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS01410 8bc7ece5f8e4fbc8070e4df1396f02df 262 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 86 260 3.3E-7 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS01290 62550d635bd1484ed5a40ff2bde4c57b 236 Gene3D G3DSA:3.40.50.2300 4 127 1.6E-39 T 19-04-2016 ALIDE2_RS01290 62550d635bd1484ed5a40ff2bde4c57b 236 PANTHER PTHR26402:SF292 3 234 3.3E-91 T 19-04-2016 ALIDE2_RS01290 62550d635bd1484ed5a40ff2bde4c57b 236 Pfam PF00072 Response regulator receiver domain 6 119 4.5E-27 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS01290 62550d635bd1484ed5a40ff2bde4c57b 236 SUPERFAMILY SSF52172 3 130 2.42E-40 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS01290 62550d635bd1484ed5a40ff2bde4c57b 236 Gene3D G3DSA:1.10.10.10 133 233 5.5E-33 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01290 62550d635bd1484ed5a40ff2bde4c57b 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 1.6E-23 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS01290 62550d635bd1484ed5a40ff2bde4c57b 236 SMART SM00448 3 118 7.5E-42 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS01290 62550d635bd1484ed5a40ff2bde4c57b 236 PANTHER PTHR26402 3 234 3.3E-91 T 19-04-2016 ALIDE2_RS01290 62550d635bd1484ed5a40ff2bde4c57b 236 SUPERFAMILY SSF46894 132 232 7.37E-29 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS01290 62550d635bd1484ed5a40ff2bde4c57b 236 SMART SM00862 155 231 2.2E-25 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS10465 8edbb0b1b9a4ad368db94d46298583f6 286 PANTHER PTHR21631 1 253 9.8E-87 T 19-04-2016 ALIDE2_RS10465 8edbb0b1b9a4ad368db94d46298583f6 286 SUPERFAMILY SSF51621 5 285 2.6E-89 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS10465 8edbb0b1b9a4ad368db94d46298583f6 286 Pfam PF13714 Phosphoenolpyruvate phosphomutase 7 248 4.5E-53 T 19-04-2016 ALIDE2_RS10465 8edbb0b1b9a4ad368db94d46298583f6 286 Gene3D G3DSA:3.20.20.60 3 285 1.7E-87 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS10465 8edbb0b1b9a4ad368db94d46298583f6 286 PANTHER PTHR21631:SF4 1 253 9.8E-87 T 19-04-2016 ALIDE2_RS23205 e3d9dbb354a0d7a957a616349e7a36ad 313 SUPERFAMILY SSF46785 11 92 2.27E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23205 e3d9dbb354a0d7a957a616349e7a36ad 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 3.6E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS23205 e3d9dbb354a0d7a957a616349e7a36ad 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 3.6E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS23205 e3d9dbb354a0d7a957a616349e7a36ad 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 3.6E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS23205 e3d9dbb354a0d7a957a616349e7a36ad 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 71 1.0E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS23205 e3d9dbb354a0d7a957a616349e7a36ad 313 PANTHER PTHR30346 10 307 3.0E-47 T 19-04-2016 ALIDE2_RS23205 e3d9dbb354a0d7a957a616349e7a36ad 313 Gene3D G3DSA:1.10.10.10 12 97 1.1E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23205 e3d9dbb354a0d7a957a616349e7a36ad 313 Gene3D G3DSA:3.40.190.10 199 273 3.3E-8 T 19-04-2016 ALIDE2_RS23205 e3d9dbb354a0d7a957a616349e7a36ad 313 Gene3D G3DSA:3.40.190.10 102 198 2.2E-12 T 19-04-2016 ALIDE2_RS23205 e3d9dbb354a0d7a957a616349e7a36ad 313 Pfam PF03466 LysR substrate binding domain 98 306 9.9E-26 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS23205 e3d9dbb354a0d7a957a616349e7a36ad 313 SUPERFAMILY SSF53850 101 309 1.45E-26 T 19-04-2016 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 PANTHER PTHR21060:SF11 1 393 3.4E-135 T 19-04-2016 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 SUPERFAMILY SSF53067 3 197 1.29E-52 T 19-04-2016 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 PANTHER PTHR21060 1 393 3.4E-135 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 PRINTS PR00471 Acetate kinase family signature 175 188 1.2E-31 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 PRINTS PR00471 Acetate kinase family signature 204 225 1.2E-31 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 PRINTS PR00471 Acetate kinase family signature 5 16 1.2E-31 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 PRINTS PR00471 Acetate kinase family signature 300 313 1.2E-31 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 PRINTS PR00471 Acetate kinase family signature 322 338 1.2E-31 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 PRINTS PR00471 Acetate kinase family signature 374 386 1.2E-31 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 SUPERFAMILY SSF53067 163 393 2.41E-69 T 19-04-2016 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 Gene3D G3DSA:3.30.420.40 207 392 1.9E-65 T 19-04-2016 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 Gene3D G3DSA:3.30.420.40 84 206 5.3E-6 T 19-04-2016 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 Hamap MF_00020 Acetate kinase [ackA]. 1 396 147.637 T 19-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 TIGRFAM TIGR00016 ackA: acetate kinase 3 392 3.9E-104 T 19-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 PIRSF PIRSF000722 1 395 5.8E-126 T 19-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 Pfam PF00871 Acetokinase family 5 386 1.3E-102 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS21910 1d3dac256656d90473d9c9a3a7efba3f 396 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 19-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS22325 edd440bcfad68dd49dbd9c6afe8655d6 460 SUPERFAMILY SSF53092 3 169 1.31E-49 T 19-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal ALIDE2_RS22325 edd440bcfad68dd49dbd9c6afe8655d6 460 SMART SM01011 1 131 5.2E-60 T 19-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 ALIDE2_RS22325 edd440bcfad68dd49dbd9c6afe8655d6 460 Gene3D G3DSA:3.90.230.10 174 458 9.5E-81 T 19-04-2016 IPR000994 Peptidase M24, structural domain ALIDE2_RS22325 edd440bcfad68dd49dbd9c6afe8655d6 460 Pfam PF05195 Aminopeptidase P, N-terminal domain 5 121 1.4E-34 T 19-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 ALIDE2_RS22325 edd440bcfad68dd49dbd9c6afe8655d6 460 PANTHER PTHR10804 387 459 3.7E-134 T 19-04-2016 ALIDE2_RS22325 edd440bcfad68dd49dbd9c6afe8655d6 460 PANTHER PTHR10804 5 370 3.7E-134 T 19-04-2016 ALIDE2_RS22325 edd440bcfad68dd49dbd9c6afe8655d6 460 SUPERFAMILY SSF55920 170 458 4.32E-80 T 19-04-2016 IPR000994 Peptidase M24, structural domain ALIDE2_RS22325 edd440bcfad68dd49dbd9c6afe8655d6 460 Gene3D G3DSA:3.40.350.10 3 173 2.5E-50 T 19-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ALIDE2_RS22325 edd440bcfad68dd49dbd9c6afe8655d6 460 Pfam PF00557 Metallopeptidase family M24 176 437 2.0E-62 T 19-04-2016 IPR000994 Peptidase M24, structural domain ALIDE2_RS22325 edd440bcfad68dd49dbd9c6afe8655d6 460 PANTHER PTHR10804:SF17 387 459 3.7E-134 T 19-04-2016 ALIDE2_RS22325 edd440bcfad68dd49dbd9c6afe8655d6 460 PANTHER PTHR10804:SF17 5 370 3.7E-134 T 19-04-2016 ALIDE2_RS11665 7e40b367ba9282b95be184ecbf407356 226 Gene3D G3DSA:3.30.460.10 15 119 5.5E-32 T 19-04-2016 ALIDE2_RS11665 7e40b367ba9282b95be184ecbf407356 226 Pfam PF02410 Ribosomal silencing factor during starvation 21 116 1.5E-21 T 19-04-2016 ALIDE2_RS11665 7e40b367ba9282b95be184ecbf407356 226 PANTHER PTHR21043 18 117 4.6E-28 T 19-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ALIDE2_RS11665 7e40b367ba9282b95be184ecbf407356 226 SUPERFAMILY SSF81301 15 121 3.27E-31 T 19-04-2016 ALIDE2_RS11665 7e40b367ba9282b95be184ecbf407356 226 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 20 116 2.3E-28 T 19-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ALIDE2_RS11665 7e40b367ba9282b95be184ecbf407356 226 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 11 117 21.269 T 19-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ALIDE2_RS11265 f2d15fac23b78e2365e294b4016a938e 510 PANTHER PTHR38761 1 510 1.7E-178 T 19-04-2016 ALIDE2_RS11265 f2d15fac23b78e2365e294b4016a938e 510 SUPERFAMILY SSF55931 11 498 1.11E-171 T 19-04-2016 ALIDE2_RS11265 f2d15fac23b78e2365e294b4016a938e 510 Pfam PF04262 Glutamate-cysteine ligase 14 363 1.3E-133 T 19-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 ALIDE2_RS11265 f2d15fac23b78e2365e294b4016a938e 510 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 510 196.124 T 19-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 ALIDE2_RS11265 f2d15fac23b78e2365e294b4016a938e 510 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 14 500 2.9E-150 T 19-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 ALIDE2_RS17780 e54b3d01c21d90796c59ac2ebc65229a 399 Gene3D G3DSA:3.40.50.2300 159 302 6.8E-17 T 19-04-2016 ALIDE2_RS17780 e54b3d01c21d90796c59ac2ebc65229a 399 PANTHER PTHR30483:SF17 1 399 1.2E-171 T 19-04-2016 ALIDE2_RS17780 e54b3d01c21d90796c59ac2ebc65229a 399 Pfam PF13458 Periplasmic binding protein 29 363 1.3E-82 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS17780 e54b3d01c21d90796c59ac2ebc65229a 399 Gene3D G3DSA:3.40.50.2300 303 352 1.1E-32 T 19-04-2016 ALIDE2_RS17780 e54b3d01c21d90796c59ac2ebc65229a 399 Gene3D G3DSA:3.40.50.2300 23 148 1.1E-32 T 19-04-2016 ALIDE2_RS17780 e54b3d01c21d90796c59ac2ebc65229a 399 PANTHER PTHR30483 1 399 1.2E-171 T 19-04-2016 ALIDE2_RS17780 e54b3d01c21d90796c59ac2ebc65229a 399 SUPERFAMILY SSF53822 29 398 7.06E-90 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 SMART SM00478 333 495 2.5E-9 T 19-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 SUPERFAMILY SSF46689 149 198 1.52E-10 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 PANTHER PTHR10242 210 251 1.9E-74 T 19-04-2016 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 PANTHER PTHR10242 276 495 1.9E-74 T 19-04-2016 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 Pfam PF12833 Helix-turn-helix domain 119 198 2.8E-25 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 Gene3D G3DSA:1.10.10.60 151 199 6.5E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 SUPERFAMILY SSF57884 8 87 4.84E-32 T 19-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 Gene3D G3DSA:1.10.340.30 324 443 1.4E-37 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 Pfam PF06029 AlkA N-terminal domain 209 323 1.4E-32 T 19-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 Gene3D G3DSA:1.10.10.60 113 150 7.8E-10 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 329 479 1.8E-9 T 19-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 SMART SM00342 113 196 7.6E-27 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 PANTHER PTHR10242:SF3 210 251 1.9E-74 T 19-04-2016 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 PANTHER PTHR10242:SF3 276 495 1.9E-74 T 19-04-2016 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 Gene3D G3DSA:3.40.10.10 7 89 1.7E-34 T 19-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 SMART SM01009 208 323 2.4E-49 T 19-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 150 192 - T 19-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 Gene3D G3DSA:3.30.310.20 209 323 4.8E-32 T 19-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 SUPERFAMILY SSF48150 314 489 4.54E-41 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 Pfam PF02805 Metal binding domain of Ada 13 76 3.8E-30 T 19-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 Gene3D G3DSA:1.10.1670.10 444 490 3.5E-11 T 19-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal ALIDE2_RS14480 fd150fb05dde8b4bbab79a7cbf8c124c 499 SUPERFAMILY SSF55945 209 307 5.02E-22 T 19-04-2016 ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 PRINTS PR01798 Succinyl-CoA synthase signature 217 230 8.0E-33 T 19-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 PRINTS PR01798 Succinyl-CoA synthase signature 85 102 8.0E-33 T 19-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 PRINTS PR01798 Succinyl-CoA synthase signature 249 266 8.0E-33 T 19-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 PRINTS PR01798 Succinyl-CoA synthase signature 186 204 8.0E-33 T 19-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 SMART SM00881 4 103 2.1E-27 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 Pfam PF00549 CoA-ligase 160 271 8.4E-15 T 19-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 PIRSF PIRSF001553 1 297 4.2E-113 T 19-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 SUPERFAMILY SSF52210 132 296 6.93E-52 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 Gene3D G3DSA:3.40.50.261 129 295 8.4E-69 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 161 190 - T 19-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 Gene3D G3DSA:3.40.50.720 2 128 4.6E-45 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 245 258 - T 19-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 PANTHER PTHR11117 1 297 2.8E-152 T 19-04-2016 ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 Pfam PF02629 CoA binding domain 6 102 3.5E-22 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 SUPERFAMILY SSF51735 1 117 4.85E-34 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22835 ccc7d480235c58eb95305c3c025eab2f 297 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 297 1.3E-123 T 19-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 ALIDE2_RS11855 93209b1ecad26a936ba4dc1c72a84f87 264 PANTHER PTHR26402:SF151 48 263 5.1E-45 T 19-04-2016 ALIDE2_RS11855 93209b1ecad26a936ba4dc1c72a84f87 264 SMART SM00421 201 258 6.8E-24 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS11855 93209b1ecad26a936ba4dc1c72a84f87 264 ProSitePatterns PS00622 LuxR-type HTH domain signature. 218 245 - T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS11855 93209b1ecad26a936ba4dc1c72a84f87 264 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 218 234 4.3E-13 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS11855 93209b1ecad26a936ba4dc1c72a84f87 264 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 218 4.3E-13 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS11855 93209b1ecad26a936ba4dc1c72a84f87 264 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 234 246 4.3E-13 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS11855 93209b1ecad26a936ba4dc1c72a84f87 264 Pfam PF00196 Bacterial regulatory proteins, luxR family 203 258 9.7E-20 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS11855 93209b1ecad26a936ba4dc1c72a84f87 264 PANTHER PTHR26402 48 263 5.1E-45 T 19-04-2016 ALIDE2_RS11855 93209b1ecad26a936ba4dc1c72a84f87 264 SUPERFAMILY SSF52172 47 179 2.13E-22 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS11855 93209b1ecad26a936ba4dc1c72a84f87 264 Gene3D G3DSA:3.40.50.2300 46 164 7.2E-23 T 19-04-2016 ALIDE2_RS11855 93209b1ecad26a936ba4dc1c72a84f87 264 SUPERFAMILY SSF46894 192 263 2.58E-20 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS11855 93209b1ecad26a936ba4dc1c72a84f87 264 SMART SM00448 48 161 1.3E-12 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS11855 93209b1ecad26a936ba4dc1c72a84f87 264 Gene3D G3DSA:1.10.10.10 165 263 9.8E-29 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11855 93209b1ecad26a936ba4dc1c72a84f87 264 Pfam PF00072 Response regulator receiver domain 50 151 7.5E-18 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS12925 49ea89feb8bd1e834d70d69a8d389edc 413 Gene3D G3DSA:2.40.30.10 202 286 1.3E-27 T 19-04-2016 ALIDE2_RS12925 49ea89feb8bd1e834d70d69a8d389edc 413 SUPERFAMILY SSF160996 203 356 6.54E-38 T 19-04-2016 ALIDE2_RS12925 49ea89feb8bd1e834d70d69a8d389edc 413 SUPERFAMILY SSF51905 353 410 7.63E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12925 49ea89feb8bd1e834d70d69a8d389edc 413 SUPERFAMILY SSF51905 6 202 7.63E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12925 49ea89feb8bd1e834d70d69a8d389edc 413 PANTHER PTHR10617:SF103 346 410 2.0E-102 T 19-04-2016 ALIDE2_RS12925 49ea89feb8bd1e834d70d69a8d389edc 413 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 9 408 4.9E-111 T 19-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like ALIDE2_RS12925 49ea89feb8bd1e834d70d69a8d389edc 413 PANTHER PTHR10617 6 302 2.0E-102 T 19-04-2016 ALIDE2_RS12925 49ea89feb8bd1e834d70d69a8d389edc 413 Pfam PF03486 HI0933-like protein 7 408 1.1E-132 T 19-04-2016 ALIDE2_RS12925 49ea89feb8bd1e834d70d69a8d389edc 413 Gene3D G3DSA:1.10.8.260 287 337 1.3E-4 T 19-04-2016 IPR023166 HI0933 insert-like domain ALIDE2_RS12925 49ea89feb8bd1e834d70d69a8d389edc 413 Gene3D G3DSA:3.50.50.60 355 409 6.7E-38 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12925 49ea89feb8bd1e834d70d69a8d389edc 413 Gene3D G3DSA:3.50.50.60 6 200 6.7E-38 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12925 49ea89feb8bd1e834d70d69a8d389edc 413 PANTHER PTHR10617:SF103 6 302 2.0E-102 T 19-04-2016 ALIDE2_RS12925 49ea89feb8bd1e834d70d69a8d389edc 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 7.9E-6 T 19-04-2016 ALIDE2_RS12925 49ea89feb8bd1e834d70d69a8d389edc 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 378 385 7.9E-6 T 19-04-2016 ALIDE2_RS12925 49ea89feb8bd1e834d70d69a8d389edc 413 PANTHER PTHR10617 346 410 2.0E-102 T 19-04-2016 ALIDE2_RS16930 d0c6075c401b3476c810818953808872 440 SUPERFAMILY SSF53623 7 287 2.75E-81 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS16930 d0c6075c401b3476c810818953808872 440 PANTHER PTHR11136 16 439 2.0E-118 T 19-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 ALIDE2_RS16930 d0c6075c401b3476c810818953808872 440 SUPERFAMILY SSF53244 289 427 2.01E-30 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS16930 d0c6075c401b3476c810818953808872 440 Pfam PF08245 Mur ligase middle domain 48 226 4.9E-11 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS16930 d0c6075c401b3476c810818953808872 440 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 141 156 - T 19-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 ALIDE2_RS16930 d0c6075c401b3476c810818953808872 440 PIRSF PIRSF001563 5 430 2.6E-104 T 19-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 ALIDE2_RS16930 d0c6075c401b3476c810818953808872 440 Gene3D G3DSA:3.90.190.20 291 427 1.6E-40 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS16930 d0c6075c401b3476c810818953808872 440 Pfam PF02875 Mur ligase family, glutamate ligase domain 290 354 4.8E-6 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS16930 d0c6075c401b3476c810818953808872 440 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 427 2.7E-102 T 19-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 ALIDE2_RS16930 d0c6075c401b3476c810818953808872 440 Gene3D G3DSA:3.40.1190.10 7 290 2.5E-93 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS15540 632c1bb37bcec281ac9ef100d13278f2 153 Pfam PF12279 Protein of unknown function (DUF3619) 15 147 2.4E-43 T 19-04-2016 IPR022064 Protein of unknown function DUF3619 ALIDE2_RS15530 4bb71f2dbdf05b619066fcfbc9ba92f7 597 Gene3D G3DSA:3.40.50.970 382 585 1.4E-76 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS15530 4bb71f2dbdf05b619066fcfbc9ba92f7 597 Gene3D G3DSA:3.40.50.970 27 198 2.1E-72 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS15530 4bb71f2dbdf05b619066fcfbc9ba92f7 597 SUPERFAMILY SSF52467 212 386 6.86E-64 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS15530 4bb71f2dbdf05b619066fcfbc9ba92f7 597 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 219 355 4.9E-45 T 19-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ALIDE2_RS15530 4bb71f2dbdf05b619066fcfbc9ba92f7 597 SUPERFAMILY SSF52518 397 592 1.84E-67 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS15530 4bb71f2dbdf05b619066fcfbc9ba92f7 597 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 30 193 7.2E-56 T 19-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ALIDE2_RS15530 4bb71f2dbdf05b619066fcfbc9ba92f7 597 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 29 591 4.4E-250 T 19-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS15530 4bb71f2dbdf05b619066fcfbc9ba92f7 597 Gene3D G3DSA:3.40.50.1220 213 381 7.2E-64 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS15530 4bb71f2dbdf05b619066fcfbc9ba92f7 597 PANTHER PTHR18968 8 592 0.0 T 19-04-2016 ALIDE2_RS15530 4bb71f2dbdf05b619066fcfbc9ba92f7 597 SUPERFAMILY SSF52518 25 196 2.52E-62 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS15530 4bb71f2dbdf05b619066fcfbc9ba92f7 597 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 420 568 5.9E-50 T 19-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ALIDE2_RS15530 4bb71f2dbdf05b619066fcfbc9ba92f7 597 PANTHER PTHR18968:SF116 8 592 0.0 T 19-04-2016 ALIDE2_RS15705 9cd4a4f7f780b6d096f54bbe3a04eb62 438 Pfam PF00589 Phage integrase family 265 398 1.2E-10 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS15705 9cd4a4f7f780b6d096f54bbe3a04eb62 438 SUPERFAMILY SSF56349 116 405 4.41E-35 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS15705 9cd4a4f7f780b6d096f54bbe3a04eb62 438 PANTHER PTHR30629:SF4 166 419 7.7E-50 T 19-04-2016 ALIDE2_RS15705 9cd4a4f7f780b6d096f54bbe3a04eb62 438 PANTHER PTHR30629:SF4 6 148 7.7E-50 T 19-04-2016 ALIDE2_RS15705 9cd4a4f7f780b6d096f54bbe3a04eb62 438 PANTHER PTHR30629 166 419 7.7E-50 T 19-04-2016 ALIDE2_RS15705 9cd4a4f7f780b6d096f54bbe3a04eb62 438 PANTHER PTHR30629 6 148 7.7E-50 T 19-04-2016 ALIDE2_RS15705 9cd4a4f7f780b6d096f54bbe3a04eb62 438 Gene3D G3DSA:1.10.443.10 255 399 8.8E-22 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS15705 9cd4a4f7f780b6d096f54bbe3a04eb62 438 Pfam PF13356 Domain of unknown function (DUF4102) 10 98 1.2E-12 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 ALIDE2_RS19115 b283aa81f412c3acad0db13d83442ac0 110 PANTHER PTHR36455 2 101 2.2E-13 T 19-04-2016 ALIDE2_RS19115 b283aa81f412c3acad0db13d83442ac0 110 Pfam PF05717 IS66 Orf2 like protein 6 101 7.0E-27 T 19-04-2016 IPR008878 Transposase IS66, Orf2 ALIDE2_RS15195 b283aa81f412c3acad0db13d83442ac0 110 PANTHER PTHR36455 2 101 2.2E-13 T 19-04-2016 ALIDE2_RS15195 b283aa81f412c3acad0db13d83442ac0 110 Pfam PF05717 IS66 Orf2 like protein 6 101 7.0E-27 T 19-04-2016 IPR008878 Transposase IS66, Orf2 ALIDE2_RS00990 b283aa81f412c3acad0db13d83442ac0 110 PANTHER PTHR36455 2 101 2.2E-13 T 19-04-2016 ALIDE2_RS00990 b283aa81f412c3acad0db13d83442ac0 110 Pfam PF05717 IS66 Orf2 like protein 6 101 7.0E-27 T 19-04-2016 IPR008878 Transposase IS66, Orf2 ALIDE2_RS01915 b283aa81f412c3acad0db13d83442ac0 110 PANTHER PTHR36455 2 101 2.2E-13 T 19-04-2016 ALIDE2_RS01915 b283aa81f412c3acad0db13d83442ac0 110 Pfam PF05717 IS66 Orf2 like protein 6 101 7.0E-27 T 19-04-2016 IPR008878 Transposase IS66, Orf2 ALIDE2_RS03380 b283aa81f412c3acad0db13d83442ac0 110 PANTHER PTHR36455 2 101 2.2E-13 T 19-04-2016 ALIDE2_RS03380 b283aa81f412c3acad0db13d83442ac0 110 Pfam PF05717 IS66 Orf2 like protein 6 101 7.0E-27 T 19-04-2016 IPR008878 Transposase IS66, Orf2 ALIDE2_RS19665 b283aa81f412c3acad0db13d83442ac0 110 PANTHER PTHR36455 2 101 2.2E-13 T 19-04-2016 ALIDE2_RS19665 b283aa81f412c3acad0db13d83442ac0 110 Pfam PF05717 IS66 Orf2 like protein 6 101 7.0E-27 T 19-04-2016 IPR008878 Transposase IS66, Orf2 ALIDE2_RS13810 b283aa81f412c3acad0db13d83442ac0 110 PANTHER PTHR36455 2 101 2.2E-13 T 19-04-2016 ALIDE2_RS13810 b283aa81f412c3acad0db13d83442ac0 110 Pfam PF05717 IS66 Orf2 like protein 6 101 7.0E-27 T 19-04-2016 IPR008878 Transposase IS66, Orf2 ALIDE2_RS17490 b283aa81f412c3acad0db13d83442ac0 110 PANTHER PTHR36455 2 101 2.2E-13 T 19-04-2016 ALIDE2_RS17490 b283aa81f412c3acad0db13d83442ac0 110 Pfam PF05717 IS66 Orf2 like protein 6 101 7.0E-27 T 19-04-2016 IPR008878 Transposase IS66, Orf2 ALIDE2_RS16955 9df690908539959635cc1ff71bbffd53 660 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 374 387 - T 19-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ALIDE2_RS16955 9df690908539959635cc1ff71bbffd53 660 SMART SM00382 370 511 7.4E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS16955 9df690908539959635cc1ff71bbffd53 660 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 561 570 - T 19-04-2016 IPR025944 Sigma-54 interaction domain, conserved site ALIDE2_RS16955 9df690908539959635cc1ff71bbffd53 660 SUPERFAMILY SSF52540 350 590 4.02E-65 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16955 9df690908539959635cc1ff71bbffd53 660 Pfam PF01590 GAF domain 105 213 3.2E-6 T 19-04-2016 IPR003018 GAF domain GO:0005515 ALIDE2_RS16955 9df690908539959635cc1ff71bbffd53 660 Gene3D G3DSA:1.10.10.60 594 655 1.4E-11 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS16955 9df690908539959635cc1ff71bbffd53 660 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 434 449 - T 19-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ALIDE2_RS16955 9df690908539959635cc1ff71bbffd53 660 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 619 636 5.0E-6 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS16955 9df690908539959635cc1ff71bbffd53 660 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 636 656 5.0E-6 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS16955 9df690908539959635cc1ff71bbffd53 660 Pfam PF00158 Sigma-54 interaction domain 351 514 6.1E-59 T 19-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ALIDE2_RS16955 9df690908539959635cc1ff71bbffd53 660 Pfam PF02954 Bacterial regulatory protein, Fis family 614 653 3.1E-6 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS16955 9df690908539959635cc1ff71bbffd53 660 Gene3D G3DSA:3.40.50.300 346 518 3.7E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16955 9df690908539959635cc1ff71bbffd53 660 SUPERFAMILY SSF46689 561 655 1.03E-11 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS16955 9df690908539959635cc1ff71bbffd53 660 PANTHER PTHR32071 342 659 9.1E-133 T 19-04-2016 ALIDE2_RS16955 9df690908539959635cc1ff71bbffd53 660 Gene3D G3DSA:1.10.8.60 521 593 4.7E-26 T 19-04-2016 ALIDE2_RS00545 eef351932a71aa67a0462e10dcf09a78 343 PANTHER PTHR21091 15 330 3.4E-153 T 19-04-2016 ALIDE2_RS00545 eef351932a71aa67a0462e10dcf09a78 343 Pfam PF02574 Homocysteine S-methyltransferase 22 330 1.0E-89 T 19-04-2016 IPR003726 Homocysteine-binding domain ALIDE2_RS00545 eef351932a71aa67a0462e10dcf09a78 343 PANTHER PTHR21091:SF112 15 330 3.4E-153 T 19-04-2016 ALIDE2_RS00545 eef351932a71aa67a0462e10dcf09a78 343 Gene3D G3DSA:3.20.20.330 8 334 5.6E-114 T 19-04-2016 IPR003726 Homocysteine-binding domain ALIDE2_RS00545 eef351932a71aa67a0462e10dcf09a78 343 SUPERFAMILY SSF82282 13 333 2.75E-96 T 19-04-2016 IPR003726 Homocysteine-binding domain ALIDE2_RS20355 08e132273887bfde5a11c55f364d5ffc 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 1.2E-34 T 19-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal ALIDE2_RS20355 08e132273887bfde5a11c55f364d5ffc 310 Gene3D G3DSA:3.40.50.620 1 181 2.0E-62 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS20355 08e132273887bfde5a11c55f364d5ffc 310 PIRSF PIRSF000089 1 310 2.3E-104 T 19-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 ALIDE2_RS20355 08e132273887bfde5a11c55f364d5ffc 310 PANTHER PTHR10909 104 307 4.0E-119 T 19-04-2016 ALIDE2_RS20355 08e132273887bfde5a11c55f364d5ffc 310 PANTHER PTHR10909:SF294 104 307 4.0E-119 T 19-04-2016 ALIDE2_RS20355 08e132273887bfde5a11c55f364d5ffc 310 Gene3D G3DSA:3.40.50.1220 185 310 2.4E-59 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS20355 08e132273887bfde5a11c55f364d5ffc 310 SUPERFAMILY SSF52467 189 310 1.2E-44 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS20355 08e132273887bfde5a11c55f364d5ffc 310 SUPERFAMILY SSF52402 3 186 6.14E-55 T 19-04-2016 ALIDE2_RS20355 08e132273887bfde5a11c55f364d5ffc 310 Pfam PF01012 Electron transfer flavoprotein domain 4 169 4.5E-36 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS20355 08e132273887bfde5a11c55f364d5ffc 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 19-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site ALIDE2_RS20355 08e132273887bfde5a11c55f364d5ffc 310 SMART SM00893 3 182 2.0E-56 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS23460 922eb387a5acb473224cf9070bdff8db 398 Gene3D G3DSA:3.30.9.10 128 184 5.3E-17 T 19-04-2016 ALIDE2_RS23460 922eb387a5acb473224cf9070bdff8db 398 Gene3D G3DSA:3.30.9.10 264 351 5.3E-17 T 19-04-2016 ALIDE2_RS23460 922eb387a5acb473224cf9070bdff8db 398 PANTHER PTHR13847:SF148 1 57 9.4E-60 T 19-04-2016 ALIDE2_RS23460 922eb387a5acb473224cf9070bdff8db 398 PANTHER PTHR13847:SF148 101 398 9.4E-60 T 19-04-2016 ALIDE2_RS23460 922eb387a5acb473224cf9070bdff8db 398 SUPERFAMILY SSF54373 264 355 4.58E-12 T 19-04-2016 ALIDE2_RS23460 922eb387a5acb473224cf9070bdff8db 398 Pfam PF01266 FAD dependent oxidoreductase 2 394 2.0E-58 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS23460 922eb387a5acb473224cf9070bdff8db 398 Gene3D G3DSA:3.50.50.60 185 263 3.4E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS23460 922eb387a5acb473224cf9070bdff8db 398 Gene3D G3DSA:3.50.50.60 102 124 3.4E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS23460 922eb387a5acb473224cf9070bdff8db 398 Gene3D G3DSA:3.50.50.60 2 52 3.4E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS23460 922eb387a5acb473224cf9070bdff8db 398 Gene3D G3DSA:3.50.50.60 355 398 3.4E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS23460 922eb387a5acb473224cf9070bdff8db 398 SUPERFAMILY SSF51905 2 48 4.01E-42 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS23460 922eb387a5acb473224cf9070bdff8db 398 SUPERFAMILY SSF51905 355 398 4.01E-42 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS23460 922eb387a5acb473224cf9070bdff8db 398 SUPERFAMILY SSF51905 101 264 4.01E-42 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS23460 922eb387a5acb473224cf9070bdff8db 398 PANTHER PTHR13847 1 57 9.4E-60 T 19-04-2016 ALIDE2_RS23460 922eb387a5acb473224cf9070bdff8db 398 PANTHER PTHR13847 101 398 9.4E-60 T 19-04-2016 ALIDE2_RS12085 f01db4a167bef2e41618c79dc034c119 232 Gene3D G3DSA:3.40.190.10 97 193 7.3E-29 T 19-04-2016 ALIDE2_RS12085 f01db4a167bef2e41618c79dc034c119 232 Pfam PF03466 LysR substrate binding domain 92 208 8.0E-19 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS12085 f01db4a167bef2e41618c79dc034c119 232 PANTHER PTHR30537 1 209 9.5E-65 T 19-04-2016 ALIDE2_RS12085 f01db4a167bef2e41618c79dc034c119 232 SUPERFAMILY SSF53850 94 208 3.62E-19 T 19-04-2016 ALIDE2_RS12085 f01db4a167bef2e41618c79dc034c119 232 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 2.0E-17 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12085 f01db4a167bef2e41618c79dc034c119 232 Gene3D G3DSA:1.10.10.10 2 87 7.8E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12085 f01db4a167bef2e41618c79dc034c119 232 PANTHER PTHR30537:SF15 1 209 9.5E-65 T 19-04-2016 ALIDE2_RS12085 f01db4a167bef2e41618c79dc034c119 232 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 4.4E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12085 f01db4a167bef2e41618c79dc034c119 232 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 4.4E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12085 f01db4a167bef2e41618c79dc034c119 232 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 4.4E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12085 f01db4a167bef2e41618c79dc034c119 232 SUPERFAMILY SSF46785 6 86 8.86E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15510 664f4e0d11df7387d75b3b6058b766c6 222 PANTHER PTHR11260 1 217 3.1E-99 T 19-04-2016 ALIDE2_RS15510 664f4e0d11df7387d75b3b6058b766c6 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 84 1.7E-12 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ALIDE2_RS15510 664f4e0d11df7387d75b3b6058b766c6 222 SUPERFAMILY SSF52833 1 89 6.87E-21 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS15510 664f4e0d11df7387d75b3b6058b766c6 222 Gene3D G3DSA:3.40.30.10 1 99 2.6E-28 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS15510 664f4e0d11df7387d75b3b6058b766c6 222 PANTHER PTHR11260:SF289 1 217 3.1E-99 T 19-04-2016 ALIDE2_RS15510 664f4e0d11df7387d75b3b6058b766c6 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 3 216 2.3E-88 T 19-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 ALIDE2_RS15510 664f4e0d11df7387d75b3b6058b766c6 222 SUPERFAMILY SSF47616 86 217 1.19E-32 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS15510 664f4e0d11df7387d75b3b6058b766c6 222 Gene3D G3DSA:1.20.1050.10 100 217 4.0E-55 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS02475 2be2fbe0792b4818c756cc2dd3c8e28e 329 PANTHER PTHR30349 7 287 6.4E-63 T 19-04-2016 ALIDE2_RS02475 2be2fbe0792b4818c756cc2dd3c8e28e 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 324 1.4E-71 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS02475 2be2fbe0792b4818c756cc2dd3c8e28e 329 PANTHER PTHR30349:SF1 7 287 6.4E-63 T 19-04-2016 ALIDE2_RS02475 2be2fbe0792b4818c756cc2dd3c8e28e 329 SUPERFAMILY SSF53850 113 285 2.28E-8 T 19-04-2016 ALIDE2_RS02475 2be2fbe0792b4818c756cc2dd3c8e28e 329 PIRSF PIRSF017082 3 329 1.3E-67 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS14465 04057a37e64182ab8d29bf39227e81c0 268 PANTHER PTHR39193:SF1 1 268 8.8E-99 T 19-04-2016 ALIDE2_RS14465 04057a37e64182ab8d29bf39227e81c0 268 Gene3D G3DSA:2.60.120.10 123 266 4.1E-65 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS14465 04057a37e64182ab8d29bf39227e81c0 268 SUPERFAMILY SSF51182 16 253 2.8E-61 T 19-04-2016 IPR011051 RmlC-like cupin domain ALIDE2_RS14465 04057a37e64182ab8d29bf39227e81c0 268 PIRSF PIRSF036628 3 268 1.5E-97 T 19-04-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 ALIDE2_RS14465 04057a37e64182ab8d29bf39227e81c0 268 Pfam PF04962 KduI/IolB family 9 264 6.5E-102 T 19-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 ALIDE2_RS14465 04057a37e64182ab8d29bf39227e81c0 268 Gene3D G3DSA:2.60.120.10 17 122 4.5E-36 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS14465 04057a37e64182ab8d29bf39227e81c0 268 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 19 264 6.3E-93 T 19-04-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 ALIDE2_RS14465 04057a37e64182ab8d29bf39227e81c0 268 PANTHER PTHR39193 1 268 8.8E-99 T 19-04-2016 ALIDE2_RS13285 0e03e6e9ac702d8d88c579d2435ac2b2 293 PANTHER PTHR30425:SF0 11 293 1.9E-117 T 19-04-2016 ALIDE2_RS13285 0e03e6e9ac702d8d88c579d2435ac2b2 293 Gene3D G3DSA:1.10.3720.10 25 292 2.4E-40 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS13285 0e03e6e9ac702d8d88c579d2435ac2b2 293 PANTHER PTHR30425 11 293 1.9E-117 T 19-04-2016 ALIDE2_RS13285 0e03e6e9ac702d8d88c579d2435ac2b2 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 291 7.7E-28 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS13285 0e03e6e9ac702d8d88c579d2435ac2b2 293 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 29 292 2.2E-86 T 19-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 ALIDE2_RS13285 0e03e6e9ac702d8d88c579d2435ac2b2 293 SUPERFAMILY SSF161098 33 285 8.6E-35 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18260 892437b1828c59604052c270f373ce3e 227 Gene3D G3DSA:3.90.79.10 54 225 1.7E-41 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS18260 892437b1828c59604052c270f373ce3e 227 PANTHER PTHR12992 3 226 9.3E-57 T 19-04-2016 ALIDE2_RS18260 892437b1828c59604052c270f373ce3e 227 Pfam PF00293 NUDIX domain 64 180 4.2E-13 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ALIDE2_RS18260 892437b1828c59604052c270f373ce3e 227 SUPERFAMILY SSF55811 51 218 5.69E-37 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 SUPERFAMILY SSF82693 273 329 4.19E-20 T 19-04-2016 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 SUPERFAMILY SSF82866 822 1021 3.92E-42 T 19-04-2016 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 SUPERFAMILY SSF82714 183 265 4.05E-15 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 5.8E-76 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 5.8E-76 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 5.8E-76 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.8E-76 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 5.8E-76 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.8E-76 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 615 629 5.8E-76 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 5.8E-76 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 5.8E-76 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 Gene3D G3DSA:3.30.70.1440 677 709 2.5E-7 T 19-04-2016 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 Gene3D G3DSA:1.20.1640.10 290 503 1.1E-56 T 19-04-2016 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 SUPERFAMILY SSF82866 295 496 4.71E-47 T 19-04-2016 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 Gene3D G3DSA:3.30.70.1430 40 141 4.8E-28 T 19-04-2016 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 SUPERFAMILY SSF82714 711 795 4.05E-19 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 PANTHER PTHR32063 1 1032 0.0 T 19-04-2016 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 Pfam PF00873 AcrB/AcrD/AcrF family 4 1021 0.0 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 SUPERFAMILY SSF82693 136 182 4.19E-20 T 19-04-2016 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 SUPERFAMILY SSF82693 797 836 1.15E-10 T 19-04-2016 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 SUPERFAMILY SSF82693 670 710 1.15E-10 T 19-04-2016 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 Gene3D G3DSA:3.30.2090.10 711 796 1.2E-20 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 SUPERFAMILY SSF82693 561 657 3.4E-11 T 19-04-2016 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 Gene3D G3DSA:3.30.2090.10 183 262 2.1E-15 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 PANTHER PTHR32063:SF21 1 1032 0.0 T 19-04-2016 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 SUPERFAMILY SSF82693 40 133 2.62E-22 T 19-04-2016 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 Gene3D G3DSA:1.10.3850.10 803 1022 2.4E-52 T 19-04-2016 ALIDE2_RS06920 1c4349e86a26cc4988f6489c6a53711c 1038 Gene3D G3DSA:3.30.70.1430 564 651 1.2E-5 T 19-04-2016 ALIDE2_RS03410 d3ff828a406591159dc37ffa7a01fbb2 493 SMART SM00388 269 337 8.9E-18 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS03410 d3ff828a406591159dc37ffa7a01fbb2 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 493 6.0E-7 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS03410 d3ff828a406591159dc37ffa7a01fbb2 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 435 6.0E-7 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS03410 d3ff828a406591159dc37ffa7a01fbb2 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 474 6.0E-7 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS03410 d3ff828a406591159dc37ffa7a01fbb2 493 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 389 492 4.6E-19 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS03410 d3ff828a406591159dc37ffa7a01fbb2 493 Pfam PF00512 His Kinase A (phospho-acceptor) domain 270 337 9.0E-16 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS03410 d3ff828a406591159dc37ffa7a01fbb2 493 SUPERFAMILY SSF47384 252 337 6.08E-18 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS03410 d3ff828a406591159dc37ffa7a01fbb2 493 Gene3D G3DSA:3.30.565.10 340 492 6.5E-35 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS03410 d3ff828a406591159dc37ffa7a01fbb2 493 Pfam PF00672 HAMP domain 182 257 8.6E-7 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS03410 d3ff828a406591159dc37ffa7a01fbb2 493 Gene3D G3DSA:1.10.287.130 261 333 3.9E-17 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS03410 d3ff828a406591159dc37ffa7a01fbb2 493 PANTHER PTHR24423 241 492 4.5E-60 T 19-04-2016 ALIDE2_RS03410 d3ff828a406591159dc37ffa7a01fbb2 493 SUPERFAMILY SSF55874 327 492 9.04E-36 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS03410 d3ff828a406591159dc37ffa7a01fbb2 493 SMART SM00387 383 493 7.3E-20 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS08760 b8fbb8306d98a096873cd1726013136b 120 Pfam PF11284 Protein of unknown function (DUF3085) 22 112 2.9E-34 T 19-04-2016 IPR021436 Protein of unknown function DUF3085 ALIDE2_RS11570 ad07fafcb190ba69cee0442b6d4c3844 282 Hamap MF_01967 NAD-dependent protein deacetylase [cobB]. 9 280 62.698 T 19-04-2016 IPR026587 Sirtuin, class II ALIDE2_RS11570 ad07fafcb190ba69cee0442b6d4c3844 282 Pfam PF02146 Sir2 family 33 236 1.6E-42 T 19-04-2016 IPR003000 Sirtuin family GO:0070403 ALIDE2_RS11570 ad07fafcb190ba69cee0442b6d4c3844 282 Gene3D G3DSA:3.30.1600.10 44 79 4.0E-22 T 19-04-2016 IPR026591 Sirtuin family, catalytic core small domain ALIDE2_RS11570 ad07fafcb190ba69cee0442b6d4c3844 282 Gene3D G3DSA:3.30.1600.10 131 206 4.0E-22 T 19-04-2016 IPR026591 Sirtuin family, catalytic core small domain ALIDE2_RS11570 ad07fafcb190ba69cee0442b6d4c3844 282 PANTHER PTHR11085:SF22 14 154 1.2E-114 T 19-04-2016 ALIDE2_RS11570 ad07fafcb190ba69cee0442b6d4c3844 282 PANTHER PTHR11085:SF22 172 280 1.2E-114 T 19-04-2016 ALIDE2_RS11570 ad07fafcb190ba69cee0442b6d4c3844 282 SUPERFAMILY SSF52467 16 280 3.57E-78 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS11570 ad07fafcb190ba69cee0442b6d4c3844 282 PANTHER PTHR11085 14 154 1.2E-114 T 19-04-2016 IPR003000 Sirtuin family GO:0070403 ALIDE2_RS11570 ad07fafcb190ba69cee0442b6d4c3844 282 PANTHER PTHR11085 172 280 1.2E-114 T 19-04-2016 IPR003000 Sirtuin family GO:0070403 ALIDE2_RS11570 ad07fafcb190ba69cee0442b6d4c3844 282 Gene3D G3DSA:3.40.50.1220 212 280 2.0E-41 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS11570 ad07fafcb190ba69cee0442b6d4c3844 282 Gene3D G3DSA:3.40.50.1220 93 130 2.0E-41 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS11570 ad07fafcb190ba69cee0442b6d4c3844 282 Gene3D G3DSA:3.40.50.1220 18 43 2.0E-41 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 SUPERFAMILY SSF48179 176 327 7.99E-52 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 185 206 - T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 319 34.445 T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 Gene3D G3DSA:3.40.50.720 1 180 7.6E-54 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 PANTHER PTHR11728 1 329 2.3E-102 T 19-04-2016 ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 155 3.5E-34 T 19-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 SUPERFAMILY SSF51735 1 177 7.24E-37 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 7.1E-36 T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 195 219 7.1E-36 T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 130 150 7.1E-36 T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 7.1E-36 T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 170 194 7.1E-36 T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 235 252 7.1E-36 T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 PANTHER PTHR11728:SF1 1 329 2.3E-102 T 19-04-2016 ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 Gene3D G3DSA:1.10.1040.10 181 323 1.2E-52 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 177 317 6.8E-47 T 19-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 ALIDE2_RS05005 26138432d90cc4747080fe20eaa51e7b 330 PIRSF PIRSF000114 1 329 8.8E-93 T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 ALIDE2_RS12770 c10e986d51b1ae0eb13ad12206359f94 334 SUPERFAMILY SSF52922 196 333 1.7E-29 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS12770 c10e986d51b1ae0eb13ad12206359f94 334 Pfam PF02780 Transketolase, C-terminal domain 202 325 1.6E-24 T 19-04-2016 IPR033248 Transketolase, C-terminal domain ALIDE2_RS12770 c10e986d51b1ae0eb13ad12206359f94 334 PANTHER PTHR11624 32 333 3.1E-91 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS12770 c10e986d51b1ae0eb13ad12206359f94 334 SUPERFAMILY SSF52518 7 190 1.52E-47 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS12770 c10e986d51b1ae0eb13ad12206359f94 334 SMART SM00861 26 190 6.8E-43 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ALIDE2_RS12770 c10e986d51b1ae0eb13ad12206359f94 334 Gene3D G3DSA:3.40.50.920 203 333 1.1E-32 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS12770 c10e986d51b1ae0eb13ad12206359f94 334 Gene3D G3DSA:3.40.50.970 32 202 4.8E-51 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS12770 c10e986d51b1ae0eb13ad12206359f94 334 PANTHER PTHR11624:SF2 32 333 3.1E-91 T 19-04-2016 ALIDE2_RS12770 c10e986d51b1ae0eb13ad12206359f94 334 Pfam PF02779 Transketolase, pyrimidine binding domain 32 189 1.9E-34 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ALIDE2_RS00800 d1987eb559eea0034eb34ef948ff7156 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 92 1.7E-7 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ALIDE2_RS00800 d1987eb559eea0034eb34ef948ff7156 341 SUPERFAMILY SSF50129 4 145 2.74E-29 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS00800 d1987eb559eea0034eb34ef948ff7156 341 Pfam PF00107 Zinc-binding dehydrogenase 156 279 6.5E-26 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ALIDE2_RS00800 d1987eb559eea0034eb34ef948ff7156 341 Gene3D G3DSA:3.90.180.10 3 151 8.8E-35 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS00800 d1987eb559eea0034eb34ef948ff7156 341 SMART SM00829 13 334 8.4E-17 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ALIDE2_RS00800 d1987eb559eea0034eb34ef948ff7156 341 SUPERFAMILY SSF51735 118 279 9.03E-40 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00800 d1987eb559eea0034eb34ef948ff7156 341 Gene3D G3DSA:3.40.50.720 152 266 3.6E-28 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00800 d1987eb559eea0034eb34ef948ff7156 341 PANTHER PTHR11695 19 339 8.2E-85 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS00800 d1987eb559eea0034eb34ef948ff7156 341 PANTHER PTHR11695:SF31 19 339 8.2E-85 T 19-04-2016 ALIDE2_RS12080 33df75a46b71e36de7df9f64903a260d 476 Gene3D G3DSA:1.10.3290.10 167 385 2.9E-36 T 19-04-2016 IPR003812 Fido domain ALIDE2_RS12080 33df75a46b71e36de7df9f64903a260d 476 PANTHER PTHR13504 174 389 6.5E-12 T 19-04-2016 ALIDE2_RS12080 33df75a46b71e36de7df9f64903a260d 476 Pfam PF02661 Fic/DOC family 238 334 5.9E-11 T 19-04-2016 IPR003812 Fido domain ALIDE2_RS12080 33df75a46b71e36de7df9f64903a260d 476 SUPERFAMILY SSF140931 213 387 1.1E-19 T 19-04-2016 IPR003812 Fido domain ALIDE2_RS12080 33df75a46b71e36de7df9f64903a260d 476 PANTHER PTHR13504:SF29 174 389 6.5E-12 T 19-04-2016 ALIDE2_RS08405 20a5f6f8648a605bb19743acac1c35a5 300 PANTHER PTHR30419 1 299 2.3E-78 T 19-04-2016 ALIDE2_RS08405 20a5f6f8648a605bb19743acac1c35a5 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.3E-16 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS08405 20a5f6f8648a605bb19743acac1c35a5 300 SUPERFAMILY SSF53850 90 297 1.3E-39 T 19-04-2016 ALIDE2_RS08405 20a5f6f8648a605bb19743acac1c35a5 300 Gene3D G3DSA:3.40.190.10 91 176 1.2E-19 T 19-04-2016 ALIDE2_RS08405 20a5f6f8648a605bb19743acac1c35a5 300 Gene3D G3DSA:1.10.10.10 7 88 1.9E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08405 20a5f6f8648a605bb19743acac1c35a5 300 PANTHER PTHR30419:SF2 1 299 2.3E-78 T 19-04-2016 ALIDE2_RS08405 20a5f6f8648a605bb19743acac1c35a5 300 Gene3D G3DSA:3.40.190.10 177 265 1.1E-20 T 19-04-2016 ALIDE2_RS08405 20a5f6f8648a605bb19743acac1c35a5 300 Pfam PF03466 LysR substrate binding domain 89 294 1.8E-37 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS08405 20a5f6f8648a605bb19743acac1c35a5 300 SUPERFAMILY SSF46785 3 112 3.89E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS21720 55bd132f4028cd4f1d037cdeaecaa34f 320 SUPERFAMILY SSF53850 106 284 1.88E-16 T 19-04-2016 ALIDE2_RS21720 55bd132f4028cd4f1d037cdeaecaa34f 320 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 42 316 7.0E-93 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS21720 55bd132f4028cd4f1d037cdeaecaa34f 320 PANTHER PTHR30349 17 277 1.1E-93 T 19-04-2016 ALIDE2_RS21720 55bd132f4028cd4f1d037cdeaecaa34f 320 PANTHER PTHR30349:SF16 17 277 1.1E-93 T 19-04-2016 ALIDE2_RS21720 55bd132f4028cd4f1d037cdeaecaa34f 320 PIRSF PIRSF017082 1 319 2.2E-79 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS15575 31ce2d53f941269ef821c034dc990b2f 407 SUPERFAMILY SSF55729 191 373 9.91E-36 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS15575 31ce2d53f941269ef821c034dc990b2f 407 PANTHER PTHR31384:SF26 41 336 2.1E-45 T 19-04-2016 ALIDE2_RS15575 31ce2d53f941269ef821c034dc990b2f 407 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 25 403 3.2E-148 T 19-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition ALIDE2_RS15575 31ce2d53f941269ef821c034dc990b2f 407 PANTHER PTHR31384 41 336 2.1E-45 T 19-04-2016 ALIDE2_RS15575 31ce2d53f941269ef821c034dc990b2f 407 Gene3D G3DSA:3.40.630.30 192 353 4.6E-30 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS06225 86d041f67b95c5f7dde5a6028279a3f2 281 Gene3D G3DSA:3.30.1130.10 145 280 4.8E-52 T 19-04-2016 ALIDE2_RS06225 86d041f67b95c5f7dde5a6028279a3f2 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 15 117 2.1E-44 T 19-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS06225 86d041f67b95c5f7dde5a6028279a3f2 281 Pfam PF14489 QueF-like protein 194 268 1.7E-24 T 19-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS06225 86d041f67b95c5f7dde5a6028279a3f2 281 TIGRFAM TIGR03138 QueF: queuine synthase 4 281 2.5E-118 T 19-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS06225 86d041f67b95c5f7dde5a6028279a3f2 281 SUPERFAMILY SSF55620 184 265 1.41E-7 T 19-04-2016 ALIDE2_RS06225 86d041f67b95c5f7dde5a6028279a3f2 281 PIRSF PIRSF004750 1 281 6.2E-120 T 19-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS06225 86d041f67b95c5f7dde5a6028279a3f2 281 PANTHER PTHR34354:SF1 1 280 1.5E-85 T 19-04-2016 ALIDE2_RS06225 86d041f67b95c5f7dde5a6028279a3f2 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 155.115 T 19-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS06225 86d041f67b95c5f7dde5a6028279a3f2 281 PANTHER PTHR34354 1 280 1.5E-85 T 19-04-2016 ALIDE2_RS06225 86d041f67b95c5f7dde5a6028279a3f2 281 Gene3D G3DSA:3.30.1130.10 15 133 3.0E-43 T 19-04-2016 ALIDE2_RS21830 904f68bab9b834fb129c73e7acfd652c 328 Gene3D G3DSA:3.90.650.10 143 326 1.2E-42 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain ALIDE2_RS21830 904f68bab9b834fb129c73e7acfd652c 328 PANTHER PTHR30270:SF0 2 328 5.5E-104 T 19-04-2016 ALIDE2_RS21830 904f68bab9b834fb129c73e7acfd652c 328 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 309 8.8E-10 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain ALIDE2_RS21830 904f68bab9b834fb129c73e7acfd652c 328 SUPERFAMILY SSF56042 141 310 1.79E-35 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain ALIDE2_RS21830 904f68bab9b834fb129c73e7acfd652c 328 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 323 28.899 T 19-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 ALIDE2_RS21830 904f68bab9b834fb129c73e7acfd652c 328 PIRSF PIRSF005303 1 326 1.7E-76 T 19-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 ALIDE2_RS21830 904f68bab9b834fb129c73e7acfd652c 328 Pfam PF00586 AIR synthase related protein, N-terminal domain 27 136 1.0E-24 T 19-04-2016 IPR016188 PurM-like, N-terminal domain ALIDE2_RS21830 904f68bab9b834fb129c73e7acfd652c 328 SUPERFAMILY SSF55326 2 136 8.67E-34 T 19-04-2016 ALIDE2_RS21830 904f68bab9b834fb129c73e7acfd652c 328 Gene3D G3DSA:3.30.1330.10 2 139 3.9E-45 T 19-04-2016 IPR016188 PurM-like, N-terminal domain ALIDE2_RS21830 904f68bab9b834fb129c73e7acfd652c 328 PANTHER PTHR30270 2 328 5.5E-104 T 19-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 ALIDE2_RS21830 904f68bab9b834fb129c73e7acfd652c 328 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 326 4.4E-95 T 19-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 ALIDE2_RS07485 9d6d9388315798d5bd5aa9ea6662a980 380 Gene3D G3DSA:2.40.110.10 123 219 1.1E-30 T 19-04-2016 ALIDE2_RS07485 9d6d9388315798d5bd5aa9ea6662a980 380 SUPERFAMILY SSF47203 228 378 7.73E-47 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS07485 9d6d9388315798d5bd5aa9ea6662a980 380 PANTHER PTHR10909 5 378 1.7E-108 T 19-04-2016 ALIDE2_RS07485 9d6d9388315798d5bd5aa9ea6662a980 380 Gene3D G3DSA:1.20.140.10 220 378 4.8E-58 T 19-04-2016 ALIDE2_RS07485 9d6d9388315798d5bd5aa9ea6662a980 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 1.5E-20 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS07485 9d6d9388315798d5bd5aa9ea6662a980 380 SUPERFAMILY SSF56645 4 240 3.66E-63 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS07485 9d6d9388315798d5bd5aa9ea6662a980 380 Gene3D G3DSA:1.10.540.10 5 120 3.6E-28 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS07485 9d6d9388315798d5bd5aa9ea6662a980 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 3.5E-44 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS07485 9d6d9388315798d5bd5aa9ea6662a980 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 117 9.1E-23 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS06140 5d4e65e9b96149cbdd463c84e1d7295c 385 Gene3D G3DSA:1.10.540.10 1 119 7.9E-26 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS06140 5d4e65e9b96149cbdd463c84e1d7295c 385 SUPERFAMILY SSF47203 225 377 7.93E-41 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS06140 5d4e65e9b96149cbdd463c84e1d7295c 385 Gene3D G3DSA:1.20.140.10 216 376 9.5E-48 T 19-04-2016 ALIDE2_RS06140 5d4e65e9b96149cbdd463c84e1d7295c 385 SUPERFAMILY SSF56645 1 221 2.36E-57 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS06140 5d4e65e9b96149cbdd463c84e1d7295c 385 Gene3D G3DSA:2.40.110.10 122 215 4.9E-29 T 19-04-2016 ALIDE2_RS06140 5d4e65e9b96149cbdd463c84e1d7295c 385 PANTHER PTHR10909 1 369 9.1E-94 T 19-04-2016 ALIDE2_RS06140 5d4e65e9b96149cbdd463c84e1d7295c 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 4.6E-20 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS06140 5d4e65e9b96149cbdd463c84e1d7295c 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 225 372 3.8E-37 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS06140 5d4e65e9b96149cbdd463c84e1d7295c 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 213 3.2E-18 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS06140 5d4e65e9b96149cbdd463c84e1d7295c 385 PANTHER PTHR10909:SF10 1 369 9.1E-94 T 19-04-2016 ALIDE2_RS06415 7ee8011ab3e548ef2e71240516c4cbb8 220 SUPERFAMILY SSF50182 112 186 4.25E-10 T 19-04-2016 IPR010920 LSM domain ALIDE2_RS06415 7ee8011ab3e548ef2e71240516c4cbb8 220 PANTHER PTHR30221:SF8 1 187 4.0E-50 T 19-04-2016 ALIDE2_RS06415 7ee8011ab3e548ef2e71240516c4cbb8 220 Pfam PF00924 Mechanosensitive ion channel 67 188 1.8E-12 T 19-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ALIDE2_RS06415 7ee8011ab3e548ef2e71240516c4cbb8 220 Gene3D G3DSA:2.30.30.60 127 184 1.3E-10 T 19-04-2016 ALIDE2_RS06415 7ee8011ab3e548ef2e71240516c4cbb8 220 PANTHER PTHR30221 1 187 4.0E-50 T 19-04-2016 ALIDE2_RS01275 44a1d59eb0e9fad7662a5225df88efac 309 PANTHER PTHR30419:SF2 1 297 9.6E-71 T 19-04-2016 ALIDE2_RS01275 44a1d59eb0e9fad7662a5225df88efac 309 Gene3D G3DSA:3.40.190.10 177 264 1.2E-14 T 19-04-2016 ALIDE2_RS01275 44a1d59eb0e9fad7662a5225df88efac 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.4E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS01275 44a1d59eb0e9fad7662a5225df88efac 309 Gene3D G3DSA:3.40.190.10 83 176 9.6E-19 T 19-04-2016 ALIDE2_RS01275 44a1d59eb0e9fad7662a5225df88efac 309 Gene3D G3DSA:1.10.10.10 4 82 5.5E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01275 44a1d59eb0e9fad7662a5225df88efac 309 Pfam PF03466 LysR substrate binding domain 90 291 2.0E-36 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS01275 44a1d59eb0e9fad7662a5225df88efac 309 PANTHER PTHR30419 1 297 9.6E-71 T 19-04-2016 ALIDE2_RS01275 44a1d59eb0e9fad7662a5225df88efac 309 SUPERFAMILY SSF46785 2 107 5.99E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01275 44a1d59eb0e9fad7662a5225df88efac 309 SUPERFAMILY SSF53850 88 297 1.2E-41 T 19-04-2016 ALIDE2_RS13190 5711a71e95fd323781980473bfde4a0f 332 PANTHER PTHR30472 4 332 1.8E-108 T 19-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 ALIDE2_RS13190 5711a71e95fd323781980473bfde4a0f 332 SUPERFAMILY SSF81345 3 327 7.19E-75 T 19-04-2016 IPR029022 ABC transporter, BtuC-like ALIDE2_RS13190 5711a71e95fd323781980473bfde4a0f 332 Gene3D G3DSA:1.10.3470.10 3 330 1.3E-98 T 19-04-2016 IPR029022 ABC transporter, BtuC-like ALIDE2_RS13190 5711a71e95fd323781980473bfde4a0f 332 Pfam PF01032 FecCD transport family 11 327 6.6E-84 T 19-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 ALIDE2_RS13190 5711a71e95fd323781980473bfde4a0f 332 PANTHER PTHR30472:SF34 4 332 1.8E-108 T 19-04-2016 ALIDE2_RS10700 1afb491cf425c8cfe7cfa570ed7edb2a 174 Gene3D G3DSA:1.10.10.10 95 154 7.0E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS10700 1afb491cf425c8cfe7cfa570ed7edb2a 174 SUPERFAMILY SSF88659 93 153 4.11E-17 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS10700 1afb491cf425c8cfe7cfa570ed7edb2a 174 Gene3D G3DSA:1.10.1740.10 10 68 9.5E-18 T 19-04-2016 ALIDE2_RS10700 1afb491cf425c8cfe7cfa570ed7edb2a 174 PANTHER PTHR30173:SF6 3 154 2.9E-31 T 19-04-2016 ALIDE2_RS10700 1afb491cf425c8cfe7cfa570ed7edb2a 174 Pfam PF08281 Sigma-70, region 4 97 148 1.2E-16 T 19-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS10700 1afb491cf425c8cfe7cfa570ed7edb2a 174 PANTHER PTHR30173 3 154 2.9E-31 T 19-04-2016 ALIDE2_RS10700 1afb491cf425c8cfe7cfa570ed7edb2a 174 Pfam PF04542 Sigma-70 region 2 10 68 2.7E-12 T 19-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS10700 1afb491cf425c8cfe7cfa570ed7edb2a 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 151 5.0E-18 T 19-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS10700 1afb491cf425c8cfe7cfa570ed7edb2a 174 SUPERFAMILY SSF88946 7 77 1.49E-14 T 19-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS21690 2c71b0cd61fce44dbb0a964b15680322 321 SUPERFAMILY SSF53850 88 311 5.89E-36 T 19-04-2016 ALIDE2_RS21690 2c71b0cd61fce44dbb0a964b15680322 321 Gene3D G3DSA:3.40.190.10 90 175 2.4E-20 T 19-04-2016 ALIDE2_RS21690 2c71b0cd61fce44dbb0a964b15680322 321 PANTHER PTHR30346:SF15 1 309 1.8E-94 T 19-04-2016 ALIDE2_RS21690 2c71b0cd61fce44dbb0a964b15680322 321 Pfam PF03466 LysR substrate binding domain 88 309 8.3E-42 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS21690 2c71b0cd61fce44dbb0a964b15680322 321 PANTHER PTHR30346 1 309 1.8E-94 T 19-04-2016 ALIDE2_RS21690 2c71b0cd61fce44dbb0a964b15680322 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS21690 2c71b0cd61fce44dbb0a964b15680322 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS21690 2c71b0cd61fce44dbb0a964b15680322 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS21690 2c71b0cd61fce44dbb0a964b15680322 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.3E-19 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS21690 2c71b0cd61fce44dbb0a964b15680322 321 Gene3D G3DSA:1.10.10.10 1 80 1.6E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS21690 2c71b0cd61fce44dbb0a964b15680322 321 Gene3D G3DSA:3.40.190.10 176 269 5.0E-34 T 19-04-2016 ALIDE2_RS21690 2c71b0cd61fce44dbb0a964b15680322 321 SUPERFAMILY SSF46785 1 84 1.55E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07585 04520c3138450eeacfbd5a5b3f66de7e 269 Gene3D G3DSA:3.30.450.40 91 264 3.9E-27 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS07585 04520c3138450eeacfbd5a5b3f66de7e 269 Pfam PF09339 IclR helix-turn-helix domain 23 73 2.4E-14 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS07585 04520c3138450eeacfbd5a5b3f66de7e 269 PANTHER PTHR30136:SF4 19 261 1.1E-50 T 19-04-2016 ALIDE2_RS07585 04520c3138450eeacfbd5a5b3f66de7e 269 SUPERFAMILY SSF46785 22 92 4.01E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07585 04520c3138450eeacfbd5a5b3f66de7e 269 SUPERFAMILY SSF55781 87 264 1.57E-27 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS07585 04520c3138450eeacfbd5a5b3f66de7e 269 Gene3D G3DSA:1.10.10.10 19 90 3.0E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07585 04520c3138450eeacfbd5a5b3f66de7e 269 PANTHER PTHR30136 19 261 1.1E-50 T 19-04-2016 ALIDE2_RS07585 04520c3138450eeacfbd5a5b3f66de7e 269 SMART SM00346 20 110 9.1E-12 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS07585 04520c3138450eeacfbd5a5b3f66de7e 269 Pfam PF01614 Bacterial transcriptional regulator 142 261 8.6E-8 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 332 4.8E-19 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 PANTHER PTHR11938:SF75 350 485 5.4E-147 T 19-04-2016 ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 PANTHER PTHR11938:SF75 235 334 5.4E-147 T 19-04-2016 ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 PANTHER PTHR11938:SF75 40 217 5.4E-147 T 19-04-2016 ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 491 1.3E-221 T 19-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 Gene3D G3DSA:3.40.50.720 147 250 1.9E-38 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 Gene3D G3DSA:3.40.50.720 419 490 1.9E-38 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 PANTHER PTHR11938 350 485 5.4E-147 T 19-04-2016 ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 PANTHER PTHR11938 235 334 5.4E-147 T 19-04-2016 ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 PANTHER PTHR11938 40 217 5.4E-147 T 19-04-2016 ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 SUPERFAMILY SSF51971 142 415 4.83E-63 T 19-04-2016 ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 1.9E-20 T 19-04-2016 ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 PRINTS PR00419 Adrenodoxin reductase family signature 301 315 1.9E-20 T 19-04-2016 ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 1.9E-20 T 19-04-2016 ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 Gene3D G3DSA:1.10.1060.10 4 146 6.9E-41 T 19-04-2016 ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 131 5.9E-26 T 19-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 SUPERFAMILY SSF46548 2 154 3.66E-41 T 19-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 Gene3D G3DSA:3.50.50.60 251 415 1.6E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS04035 fe482e7f651f4b53bdf53b8b4223a4eb 492 SUPERFAMILY SSF51971 381 485 9.89E-11 T 19-04-2016 ALIDE2_RS18190 1a5b3323efe6d0f30d2313118290a667 217 Pfam PF01144 Coenzyme A transferase 8 201 3.3E-36 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS18190 1a5b3323efe6d0f30d2313118290a667 217 PANTHER PTHR13707 4 216 4.0E-88 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS18190 1a5b3323efe6d0f30d2313118290a667 217 SUPERFAMILY SSF100950 4 213 3.87E-65 T 19-04-2016 ALIDE2_RS18190 1a5b3323efe6d0f30d2313118290a667 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 45 53 - T 19-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 ALIDE2_RS18190 1a5b3323efe6d0f30d2313118290a667 217 Gene3D G3DSA:3.40.810.20 5 214 1.9E-79 T 19-04-2016 ALIDE2_RS18190 1a5b3323efe6d0f30d2313118290a667 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 5 210 1.4E-86 T 19-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 ALIDE2_RS18190 1a5b3323efe6d0f30d2313118290a667 217 SMART SM00882 7 204 7.3E-62 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS08030 745048534dbc0601d8b980050a8dccd8 409 PANTHER PTHR33567:SF3 5 405 1.2E-119 T 19-04-2016 ALIDE2_RS08030 745048534dbc0601d8b980050a8dccd8 409 Pfam PF02417 Chromate transporter 21 186 1.1E-32 T 19-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 ALIDE2_RS08030 745048534dbc0601d8b980050a8dccd8 409 Pfam PF02417 Chromate transporter 237 403 1.3E-29 T 19-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 ALIDE2_RS08030 745048534dbc0601d8b980050a8dccd8 409 PANTHER PTHR33567 5 405 1.2E-119 T 19-04-2016 ALIDE2_RS08030 745048534dbc0601d8b980050a8dccd8 409 TIGRFAM TIGR00937 2A51: chromate efflux transporter 26 402 3.6E-101 T 19-04-2016 IPR014047 Chromate transporter, long chain ALIDE2_RS08030 745048534dbc0601d8b980050a8dccd8 409 PIRSF PIRSF004810 2 408 1.4E-123 T 19-04-2016 IPR014047 Chromate transporter, long chain ALIDE2_RS17145 fbf553f864f203f1fd75369082fa1331 384 Pfam PF02684 Lipid-A-disaccharide synthetase 7 377 1.8E-93 T 19-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 ALIDE2_RS17145 fbf553f864f203f1fd75369082fa1331 384 PANTHER PTHR30372:SF0 4 383 4.8E-87 T 19-04-2016 ALIDE2_RS17145 fbf553f864f203f1fd75369082fa1331 384 Gene3D G3DSA:3.40.50.2000 160 289 1.9E-5 T 19-04-2016 ALIDE2_RS17145 fbf553f864f203f1fd75369082fa1331 384 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 384 35.101 T 19-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 ALIDE2_RS17145 fbf553f864f203f1fd75369082fa1331 384 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 5 372 6.7E-90 T 19-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 ALIDE2_RS17145 fbf553f864f203f1fd75369082fa1331 384 PANTHER PTHR30372 4 383 4.8E-87 T 19-04-2016 ALIDE2_RS17145 fbf553f864f203f1fd75369082fa1331 384 SUPERFAMILY SSF53756 6 346 7.18E-25 T 19-04-2016 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 TIGRFAM TIGR00763 lon: endopeptidase La 15 775 1.2E-296 T 19-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 PANTHER PTHR10046 11 780 0.0 T 19-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 Gene3D G3DSA:1.10.8.60 504 588 1.7E-31 T 19-04-2016 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 574 776 4.9E-94 T 19-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 SUPERFAMILY SSF52540 319 590 7.09E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 SUPERFAMILY SSF54211 599 774 4.93E-59 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 PANTHER PTHR10046:SF43 11 780 0.0 T 19-04-2016 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 14 206 1.3E-43 T 19-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 680 688 - T 19-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 360 379 3.9E-53 T 19-04-2016 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 677 696 3.9E-53 T 19-04-2016 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 599 615 3.9E-53 T 19-04-2016 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 730 748 3.9E-53 T 19-04-2016 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 707 726 3.9E-53 T 19-04-2016 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 Gene3D G3DSA:3.30.230.10 594 775 2.0E-75 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 Hamap MF_01973 Lon protease [lon]. 14 776 69.739 T 19-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 SMART SM00382 352 496 3.6E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 SUPERFAMILY SSF88697 13 206 6.21E-51 T 19-04-2016 IPR015947 PUA-like domain ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 SMART SM00464 13 207 6.5E-73 T 19-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 PIRSF PIRSF001174 5 779 0.0 T 19-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 356 493 1.8E-18 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS07325 4f4481d3c6341bbf1e5fede29936804a 806 Gene3D G3DSA:3.40.50.300 320 503 3.1E-32 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13565 19f60062bb8283275cb1398c56ed036e 452 Pfam PF10996 Beta-Casp domain 247 366 2.3E-27 T 19-04-2016 IPR022712 Beta-Casp domain ALIDE2_RS13565 19f60062bb8283275cb1398c56ed036e 452 PANTHER PTHR11203:SF11 122 451 9.8E-106 T 19-04-2016 ALIDE2_RS13565 19f60062bb8283275cb1398c56ed036e 452 PANTHER PTHR11203:SF11 1 105 9.8E-106 T 19-04-2016 ALIDE2_RS13565 19f60062bb8283275cb1398c56ed036e 452 Pfam PF00753 Metallo-beta-lactamase superfamily 16 194 1.2E-17 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS13565 19f60062bb8283275cb1398c56ed036e 452 Gene3D G3DSA:3.60.15.10 1 100 1.0E-48 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS13565 19f60062bb8283275cb1398c56ed036e 452 Gene3D G3DSA:3.60.15.10 135 257 1.0E-48 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS13565 19f60062bb8283275cb1398c56ed036e 452 SUPERFAMILY SSF56281 1 451 7.47E-131 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS13565 19f60062bb8283275cb1398c56ed036e 452 PANTHER PTHR11203 122 451 9.8E-106 T 19-04-2016 ALIDE2_RS13565 19f60062bb8283275cb1398c56ed036e 452 PANTHER PTHR11203 1 105 9.8E-106 T 19-04-2016 ALIDE2_RS13565 19f60062bb8283275cb1398c56ed036e 452 SMART SM00849 13 235 2.6E-14 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS13565 19f60062bb8283275cb1398c56ed036e 452 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 380 443 2.7E-14 T 19-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain ALIDE2_RS13565 19f60062bb8283275cb1398c56ed036e 452 SMART SM01027 247 366 2.7E-53 T 19-04-2016 IPR022712 Beta-Casp domain ALIDE2_RS15965 d9601ffbe681b46f7da7f6e56535be85 324 PANTHER PTHR30349:SF16 5 312 1.2E-93 T 19-04-2016 ALIDE2_RS15965 d9601ffbe681b46f7da7f6e56535be85 324 PANTHER PTHR30349 5 312 1.2E-93 T 19-04-2016 ALIDE2_RS15965 d9601ffbe681b46f7da7f6e56535be85 324 PIRSF PIRSF017082 3 324 2.4E-81 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS15965 d9601ffbe681b46f7da7f6e56535be85 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 319 7.6E-84 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS15965 d9601ffbe681b46f7da7f6e56535be85 324 SUPERFAMILY SSF53850 115 284 8.53E-12 T 19-04-2016 ALIDE2_RS07670 7ccf8c11d663e3598934640007bb1ed4 495 Gene3D G3DSA:3.40.309.10 269 447 4.7E-69 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS07670 7ccf8c11d663e3598934640007bb1ed4 495 Gene3D G3DSA:3.40.605.10 13 268 9.9E-94 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS07670 7ccf8c11d663e3598934640007bb1ed4 495 Pfam PF00171 Aldehyde dehydrogenase family 20 481 1.9E-171 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS07670 7ccf8c11d663e3598934640007bb1ed4 495 SUPERFAMILY SSF53720 8 485 1.3E-168 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS07670 7ccf8c11d663e3598934640007bb1ed4 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS07670 7ccf8c11d663e3598934640007bb1ed4 495 PANTHER PTHR11699 8 484 5.8E-220 T 19-04-2016 ALIDE2_RS16720 19c21ee5153a2a76c471e749d34c6e64 511 TIGRFAM TIGR02645 ARCH_P_rylase: putative thymidine phosphorylase 20 502 3.4E-172 T 19-04-2016 IPR013466 Thymidine phosphorylase/AMP phosphorylase GO:0016763 ALIDE2_RS16720 19c21ee5153a2a76c471e749d34c6e64 511 PANTHER PTHR10515 79 494 5.7E-121 T 19-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 ALIDE2_RS16720 19c21ee5153a2a76c471e749d34c6e64 511 PANTHER PTHR10515:SF0 79 494 5.7E-121 T 19-04-2016 ALIDE2_RS16720 19c21ee5153a2a76c471e749d34c6e64 511 Pfam PF02885 Glycosyl transferase family, helical bundle domain 110 166 1.2E-5 T 19-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain ALIDE2_RS16720 19c21ee5153a2a76c471e749d34c6e64 511 Pfam PF00591 Glycosyl transferase family, a/b domain 177 405 6.1E-10 T 19-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 ALIDE2_RS16720 19c21ee5153a2a76c471e749d34c6e64 511 SMART SM00941 438 505 2.7E-22 T 19-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 ALIDE2_RS16720 19c21ee5153a2a76c471e749d34c6e64 511 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 211 226 - T 19-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 ALIDE2_RS16720 19c21ee5153a2a76c471e749d34c6e64 511 Hamap MF_00703 Putative thymidine phosphorylase. 17 509 65.742 T 19-04-2016 IPR028579 Putative thymidine phosphorylase KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 ALIDE2_RS16720 19c21ee5153a2a76c471e749d34c6e64 511 Gene3D G3DSA:3.90.1170.30 427 496 6.4E-16 T 19-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 ALIDE2_RS16720 19c21ee5153a2a76c471e749d34c6e64 511 Gene3D G3DSA:3.40.1030.10 171 426 2.1E-72 T 19-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 ALIDE2_RS16720 19c21ee5153a2a76c471e749d34c6e64 511 SUPERFAMILY SSF52418 170 423 1.14E-68 T 19-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 ALIDE2_RS16720 19c21ee5153a2a76c471e749d34c6e64 511 SUPERFAMILY SSF54680 425 497 5.76E-15 T 19-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 ALIDE2_RS16720 19c21ee5153a2a76c471e749d34c6e64 511 Gene3D G3DSA:1.20.970.10 104 168 1.8E-9 T 19-04-2016 ALIDE2_RS16720 19c21ee5153a2a76c471e749d34c6e64 511 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 439 494 2.3E-10 T 19-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 ALIDE2_RS16720 19c21ee5153a2a76c471e749d34c6e64 511 SUPERFAMILY SSF47648 104 171 4.06E-11 T 19-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain ALIDE2_RS23075 0f635e316a3fad35f3e5f4cb230acc44 235 SUPERFAMILY SSF63380 94 201 3.15E-25 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ALIDE2_RS23075 0f635e316a3fad35f3e5f4cb230acc44 235 PIRSF PIRSF000498 1 213 2.3E-54 T 19-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 ALIDE2_RS23075 0f635e316a3fad35f3e5f4cb230acc44 235 Gene3D G3DSA:2.40.30.20 5 104 6.1E-27 T 19-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS23075 0f635e316a3fad35f3e5f4cb230acc44 235 PANTHER PTHR21098 1 233 2.3E-77 T 19-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 ALIDE2_RS23075 0f635e316a3fad35f3e5f4cb230acc44 235 PANTHER PTHR21098:SF4 1 233 2.3E-77 T 19-04-2016 ALIDE2_RS23075 0f635e316a3fad35f3e5f4cb230acc44 235 SUPERFAMILY SSF63380 1 89 5.1E-23 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ALIDE2_RS23075 0f635e316a3fad35f3e5f4cb230acc44 235 Pfam PF00677 Lumazine binding domain 3 88 1.3E-18 T 19-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 ALIDE2_RS23075 0f635e316a3fad35f3e5f4cb230acc44 235 Pfam PF00677 Lumazine binding domain 101 186 1.1E-16 T 19-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 ALIDE2_RS23075 0f635e316a3fad35f3e5f4cb230acc44 235 Gene3D G3DSA:2.40.30.20 105 186 3.6E-20 T 19-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS23075 0f635e316a3fad35f3e5f4cb230acc44 235 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 8.0E-55 T 19-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 416 2.3E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 430 2.3E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 2.3E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 SUPERFAMILY SSF55874 299 474 1.14E-30 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 PANTHER PTHR24423:SF474 185 474 4.1E-62 T 19-04-2016 ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 PANTHER PTHR24423:SF474 3 10 4.1E-62 T 19-04-2016 ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 SUPERFAMILY SSF47384 227 310 2.16E-17 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 SMART SM00387 359 478 4.8E-28 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 Gene3D G3DSA:3.30.565.10 296 474 1.6E-31 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 Pfam PF08521 Two-component sensor kinase N-terminal 23 167 5.7E-43 T 19-04-2016 IPR013727 Two-component sensor kinase, N-terminal ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 310 2.2E-15 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 SMART SM00388 244 310 6.3E-16 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 PANTHER PTHR24423 185 474 4.1E-62 T 19-04-2016 ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 PANTHER PTHR24423 3 10 4.1E-62 T 19-04-2016 ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 Gene3D G3DSA:1.10.287.130 236 295 8.1E-13 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS22585 da45019d74a0b0b416d0cb54066b65bd 481 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 473 1.2E-15 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 Pfam PF05190 MutS family domain IV 441 532 2.8E-29 T 19-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 Pfam PF05188 MutS domain II 130 263 1.3E-14 T 19-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 Pfam PF05192 MutS domain III 280 572 7.1E-33 T 19-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 PIRSF PIRSF037677 2 828 2.6E-141 T 19-04-2016 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 SUPERFAMILY SSF48334 279 578 4.32E-80 T 19-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 Gene3D G3DSA:1.10.1420.10 329 490 6.2E-44 T 19-04-2016 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 PANTHER PTHR11361:SF86 1 867 0.0 T 19-04-2016 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 SMART SM00533 294 604 2.2E-82 T 19-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 SUPERFAMILY SSF52540 580 814 1.89E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 PANTHER PTHR11361 1 867 0.0 T 19-04-2016 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 Pfam PF01624 MutS domain I 10 122 1.5E-39 T 19-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 Gene3D G3DSA:3.30.420.110 130 265 6.3E-28 T 19-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 SUPERFAMILY SSF53150 116 277 1.06E-29 T 19-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 9 866 4.4E-298 T 19-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 SMART SM00534 624 811 2.8E-105 T 19-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 Gene3D G3DSA:3.40.1170.10 3 122 1.5E-48 T 19-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 9 861 22.932 T 19-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 705 721 - T 19-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 Pfam PF00488 MutS domain V 627 814 5.7E-80 T 19-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 SUPERFAMILY SSF55271 4 117 4.05E-41 T 19-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS06935 318e992b3ab65a2dd9dae91d3b5e76e5 870 Gene3D G3DSA:3.40.50.300 580 815 1.5E-77 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22535 ffd2ee641b76b48cf7c148f7a0f2dfa4 345 SUPERFAMILY SSF50129 1 172 1.07E-40 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS22535 ffd2ee641b76b48cf7c148f7a0f2dfa4 345 PANTHER PTHR11695 15 343 2.3E-110 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS22535 ffd2ee641b76b48cf7c148f7a0f2dfa4 345 SUPERFAMILY SSF51735 143 314 2.03E-48 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22535 ffd2ee641b76b48cf7c148f7a0f2dfa4 345 PANTHER PTHR11695:SF605 15 343 2.3E-110 T 19-04-2016 ALIDE2_RS22535 ffd2ee641b76b48cf7c148f7a0f2dfa4 345 Gene3D G3DSA:3.40.50.720 173 289 3.6E-37 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22535 ffd2ee641b76b48cf7c148f7a0f2dfa4 345 Gene3D G3DSA:3.90.180.10 1 172 2.6E-34 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS22535 ffd2ee641b76b48cf7c148f7a0f2dfa4 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 134 5.1E-23 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ALIDE2_RS22535 ffd2ee641b76b48cf7c148f7a0f2dfa4 345 SMART SM00829 10 340 6.1E-14 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ALIDE2_RS22535 ffd2ee641b76b48cf7c148f7a0f2dfa4 345 Pfam PF00107 Zinc-binding dehydrogenase 178 301 3.5E-36 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ALIDE2_RS10540 9fe346e41cd7162017d83a372e3f39a0 729 Pfam PF10605 3HB-oligomer hydrolase (3HBOH) 22 728 3.3E-287 T 19-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 ALIDE2_RS10540 9fe346e41cd7162017d83a372e3f39a0 729 Gene3D G3DSA:3.40.50.1820 588 644 1.8E-7 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS10540 9fe346e41cd7162017d83a372e3f39a0 729 Gene3D G3DSA:3.40.50.1820 303 346 1.8E-7 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS10540 9fe346e41cd7162017d83a372e3f39a0 729 PIRSF PIRSF011409 3 729 1.7E-227 T 19-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 ALIDE2_RS21945 dfdab57558364f608cdd2f0f7bdecb26 271 SUPERFAMILY SSF103642 250 270 1.06E-7 T 19-04-2016 ALIDE2_RS21945 dfdab57558364f608cdd2f0f7bdecb26 271 Gene3D G3DSA:3.10.450.50 234 270 5.0E-12 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS21945 dfdab57558364f608cdd2f0f7bdecb26 271 Pfam PF03695 Uncharacterised protein family (UPF0149) 18 236 1.1E-36 T 19-04-2016 IPR011978 Uncharacterised protein family UPF0149 ALIDE2_RS21945 dfdab57558364f608cdd2f0f7bdecb26 271 SUPERFAMILY SSF101327 19 190 9.15E-6 T 19-04-2016 IPR011978 Uncharacterised protein family UPF0149 ALIDE2_RS21945 dfdab57558364f608cdd2f0f7bdecb26 271 Pfam PF02810 SEC-C motif 253 270 9.3E-11 T 19-04-2016 IPR004027 SEC-C motif ALIDE2_RS20405 090cd518cb392b68cb221e8c7d7b240a 705 Gene3D G3DSA:3.40.50.720 297 483 8.4E-57 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS20405 090cd518cb392b68cb221e8c7d7b240a 705 PANTHER PTHR23309:SF9 7 700 1.2E-279 T 19-04-2016 ALIDE2_RS20405 090cd518cb392b68cb221e8c7d7b240a 705 Gene3D G3DSA:3.90.226.10 6 284 2.6E-59 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS20405 090cd518cb392b68cb221e8c7d7b240a 705 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 301 477 2.9E-57 T 19-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS20405 090cd518cb392b68cb221e8c7d7b240a 705 Gene3D G3DSA:1.10.1040.10 617 698 8.7E-17 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS20405 090cd518cb392b68cb221e8c7d7b240a 705 SUPERFAMILY SSF48179 481 582 1.53E-26 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS20405 090cd518cb392b68cb221e8c7d7b240a 705 PANTHER PTHR23309 7 700 1.2E-279 T 19-04-2016 ALIDE2_RS20405 090cd518cb392b68cb221e8c7d7b240a 705 SUPERFAMILY SSF51735 299 477 1.71E-50 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS20405 090cd518cb392b68cb221e8c7d7b240a 705 SUPERFAMILY SSF48179 607 698 2.81E-22 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS20405 090cd518cb392b68cb221e8c7d7b240a 705 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 97 117 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS20405 090cd518cb392b68cb221e8c7d7b240a 705 Gene3D G3DSA:1.10.1040.10 484 575 3.6E-19 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS20405 090cd518cb392b68cb221e8c7d7b240a 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 611 696 2.0E-5 T 19-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS20405 090cd518cb392b68cb221e8c7d7b240a 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 482 575 3.7E-24 T 19-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS20405 090cd518cb392b68cb221e8c7d7b240a 705 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 224 1.1E-32 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS20405 090cd518cb392b68cb221e8c7d7b240a 705 SUPERFAMILY SSF52096 8 290 7.28E-63 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS20525 34d914e86f750124110946ce619bd27a 306 PANTHER PTHR10996:SF114 12 301 8.9E-98 T 19-04-2016 ALIDE2_RS20525 34d914e86f750124110946ce619bd27a 306 Gene3D G3DSA:3.40.50.720 92 271 3.1E-46 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS20525 34d914e86f750124110946ce619bd27a 306 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 100 270 1.2E-40 T 19-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ALIDE2_RS20525 34d914e86f750124110946ce619bd27a 306 PANTHER PTHR10996 12 301 8.9E-98 T 19-04-2016 ALIDE2_RS20525 34d914e86f750124110946ce619bd27a 306 SUPERFAMILY SSF51735 92 271 7.33E-44 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS18905 fcf62d962dcbab6eb003630c717035a3 238 SUPERFAMILY SSF53955 55 234 1.46E-56 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS18905 fcf62d962dcbab6eb003630c717035a3 238 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 3 238 37.449 T 19-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 ALIDE2_RS18905 fcf62d962dcbab6eb003630c717035a3 238 PANTHER PTHR30400 1 232 2.4E-69 T 19-04-2016 ALIDE2_RS18905 fcf62d962dcbab6eb003630c717035a3 238 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 7 237 3.1E-78 T 19-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 ALIDE2_RS18905 fcf62d962dcbab6eb003630c717035a3 238 PANTHER PTHR30400:SF0 1 232 2.4E-69 T 19-04-2016 ALIDE2_RS18905 fcf62d962dcbab6eb003630c717035a3 238 Pfam PF00912 Transglycosylase 57 232 1.6E-54 T 19-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 ALIDE2_RS18905 fcf62d962dcbab6eb003630c717035a3 238 Gene3D G3DSA:1.10.3810.10 55 234 5.3E-72 T 19-04-2016 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 PANTHER PTHR32063:SF18 10 1039 0.0 T 19-04-2016 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 1.0E-19 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 637 651 1.0E-19 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 1.0E-19 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 459 482 1.0E-19 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 406 430 1.0E-19 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 378 399 1.0E-19 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 484 507 1.0E-19 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 SUPERFAMILY SSF82714 728 812 2.75E-15 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 Gene3D G3DSA:3.30.2090.10 728 808 4.8E-15 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 Gene3D G3DSA:3.30.2090.10 195 275 4.9E-16 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 SUPERFAMILY SSF82693 278 333 2.88E-19 T 19-04-2016 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 SUPERFAMILY SSF82693 578 665 3.66E-6 T 19-04-2016 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 Gene3D G3DSA:1.10.3850.10 284 512 1.0E-43 T 19-04-2016 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 Gene3D G3DSA:1.10.3850.10 824 1035 2.0E-41 T 19-04-2016 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 SUPERFAMILY SSF82866 812 1037 2.35E-39 T 19-04-2016 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 Pfam PF00873 AcrB/AcrD/AcrF family 16 1031 2.7E-159 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 PANTHER PTHR32063 10 1039 0.0 T 19-04-2016 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 SUPERFAMILY SSF82693 145 191 2.88E-19 T 19-04-2016 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 SUPERFAMILY SSF82866 303 511 2.35E-33 T 19-04-2016 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 Gene3D G3DSA:3.30.70.1430 49 150 7.2E-22 T 19-04-2016 ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 SUPERFAMILY SSF82714 194 275 2.49E-15 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS07300 ca3a8542841a3e6cdec635f20ccb722a 1039 SUPERFAMILY SSF82693 49 144 6.54E-19 T 19-04-2016 ALIDE2_RS22405 c153e8aaac233f58fd87b601637da358 323 SUPERFAMILY SSF53850 116 284 4.34E-11 T 19-04-2016 ALIDE2_RS22405 c153e8aaac233f58fd87b601637da358 323 PANTHER PTHR30349 6 320 3.8E-70 T 19-04-2016 ALIDE2_RS22405 c153e8aaac233f58fd87b601637da358 323 PANTHER PTHR30349:SF32 6 320 3.8E-70 T 19-04-2016 ALIDE2_RS22405 c153e8aaac233f58fd87b601637da358 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 319 2.3E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22405 c153e8aaac233f58fd87b601637da358 323 PIRSF PIRSF017082 1 322 8.8E-69 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS20995 ce3d5b14e274f3456a47ef083f2fe7c5 312 SMART SM00047 142 301 1.0E-32 T 19-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 ALIDE2_RS20995 ce3d5b14e274f3456a47ef083f2fe7c5 312 PRINTS PR01002 Flagellar protein FlgJ signature 213 234 7.1E-35 T 19-04-2016 ALIDE2_RS20995 ce3d5b14e274f3456a47ef083f2fe7c5 312 PRINTS PR01002 Flagellar protein FlgJ signature 278 296 7.1E-35 T 19-04-2016 ALIDE2_RS20995 ce3d5b14e274f3456a47ef083f2fe7c5 312 PRINTS PR01002 Flagellar protein FlgJ signature 13 33 7.1E-35 T 19-04-2016 ALIDE2_RS20995 ce3d5b14e274f3456a47ef083f2fe7c5 312 PRINTS PR01002 Flagellar protein FlgJ signature 147 170 7.1E-35 T 19-04-2016 ALIDE2_RS20995 ce3d5b14e274f3456a47ef083f2fe7c5 312 PRINTS PR01002 Flagellar protein FlgJ signature 191 212 7.1E-35 T 19-04-2016 ALIDE2_RS20995 ce3d5b14e274f3456a47ef083f2fe7c5 312 PRINTS PR01002 Flagellar protein FlgJ signature 171 189 7.1E-35 T 19-04-2016 ALIDE2_RS20995 ce3d5b14e274f3456a47ef083f2fe7c5 312 PRINTS PR01002 Flagellar protein FlgJ signature 235 256 7.1E-35 T 19-04-2016 ALIDE2_RS20995 ce3d5b14e274f3456a47ef083f2fe7c5 312 PANTHER PTHR33308:SF3 143 296 2.9E-29 T 19-04-2016 ALIDE2_RS20995 ce3d5b14e274f3456a47ef083f2fe7c5 312 Gene3D G3DSA:1.10.530.10 150 185 1.0E-4 T 19-04-2016 ALIDE2_RS20995 ce3d5b14e274f3456a47ef083f2fe7c5 312 Gene3D G3DSA:1.10.530.10 260 285 1.0E-4 T 19-04-2016 ALIDE2_RS20995 ce3d5b14e274f3456a47ef083f2fe7c5 312 PANTHER PTHR33308 143 296 2.9E-29 T 19-04-2016 ALIDE2_RS20995 ce3d5b14e274f3456a47ef083f2fe7c5 312 Pfam PF10135 Rod binding protein 61 107 2.1E-11 T 19-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal ALIDE2_RS20995 ce3d5b14e274f3456a47ef083f2fe7c5 312 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 158 295 2.0E-21 T 19-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 ALIDE2_RS20995 ce3d5b14e274f3456a47ef083f2fe7c5 312 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 19 295 1.1E-79 T 19-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- ALIDE2_RS01885 1a2e7be1641a5a963121fcf6a399f60e 180 Gene3D G3DSA:1.10.520.20 2 108 8.3E-25 T 19-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain ALIDE2_RS01885 1a2e7be1641a5a963121fcf6a399f60e 180 PRINTS PR00125 ATP synthase delta subunit signature 153 171 4.9E-24 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 ALIDE2_RS01885 1a2e7be1641a5a963121fcf6a399f60e 180 PRINTS PR00125 ATP synthase delta subunit signature 77 88 4.9E-24 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 ALIDE2_RS01885 1a2e7be1641a5a963121fcf6a399f60e 180 PRINTS PR00125 ATP synthase delta subunit signature 88 102 4.9E-24 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 ALIDE2_RS01885 1a2e7be1641a5a963121fcf6a399f60e 180 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.9E-24 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 ALIDE2_RS01885 1a2e7be1641a5a963121fcf6a399f60e 180 PRINTS PR00125 ATP synthase delta subunit signature 138 153 4.9E-24 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 ALIDE2_RS01885 1a2e7be1641a5a963121fcf6a399f60e 180 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 178 1.4E-48 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 ALIDE2_RS01885 1a2e7be1641a5a963121fcf6a399f60e 180 PANTHER PTHR11910 7 178 3.4E-41 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 ALIDE2_RS01885 1a2e7be1641a5a963121fcf6a399f60e 180 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 178 2.1E-38 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 ALIDE2_RS01885 1a2e7be1641a5a963121fcf6a399f60e 180 SUPERFAMILY SSF47928 3 108 2.22E-20 T 19-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain ALIDE2_RS01885 1a2e7be1641a5a963121fcf6a399f60e 180 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 180 19.057 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 808 41.876 T 19-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 SUPERFAMILY SSF46955 411 481 7.23E-17 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 Pfam PF03147 Ferredoxin-fold anticodon binding domain 710 814 1.2E-22 T 19-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 SUPERFAMILY SSF56037 202 391 3.66E-65 T 19-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 Gene3D G3DSA:2.40.50.140 43 159 1.8E-42 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 PANTHER PTHR10947:SF0 2 814 1.5E-246 T 19-04-2016 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 PANTHER PTHR10947 2 814 1.5E-246 T 19-04-2016 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 Gene3D G3DSA:3.30.56.20 409 481 2.7E-22 T 19-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 Gene3D G3DSA:3.30.930.10 499 699 4.2E-62 T 19-04-2016 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 SUPERFAMILY SSF54991 704 814 3.01E-16 T 19-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 Gene3D G3DSA:3.50.40.10 203 390 6.9E-73 T 19-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 SMART SM00874 409 477 4.2E-23 T 19-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 SUPERFAMILY SSF50249 37 198 1.52E-46 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 Pfam PF01588 Putative tRNA binding domain 45 150 1.6E-24 T 19-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 SUPERFAMILY SSF55681 473 698 3.38E-48 T 19-04-2016 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 SMART SM00896 709 814 3.7E-30 T 19-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 Pfam PF03484 tRNA synthetase B5 domain 412 477 4.8E-15 T 19-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 Gene3D G3DSA:3.30.56.10 160 189 1.7E-23 T 19-04-2016 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 Gene3D G3DSA:3.30.56.10 1 38 1.7E-23 T 19-04-2016 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 SMART SM00873 217 390 6.6E-79 T 19-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 Pfam PF03483 B3/4 domain 218 390 1.5E-60 T 19-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 814 3.2E-216 T 19-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ALIDE2_RS14035 e98dcdf8110d14663e6b7234444c872c 814 Gene3D G3DSA:3.30.70.380 714 814 5.5E-22 T 19-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 ALIDE2_RS14360 2177eea8a79d3435d8ba2c50f030e13c 250 SUPERFAMILY SSF55729 6 239 7.42E-83 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS14360 2177eea8a79d3435d8ba2c50f030e13c 250 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 38 236 1.5E-53 T 19-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 ALIDE2_RS14360 2177eea8a79d3435d8ba2c50f030e13c 250 PANTHER PTHR30098 19 246 7.3E-59 T 19-04-2016 ALIDE2_RS14360 2177eea8a79d3435d8ba2c50f030e13c 250 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 42 213 3.7E-69 T 19-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 ALIDE2_RS14360 2177eea8a79d3435d8ba2c50f030e13c 250 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 250 94.25 T 19-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 307 440 2.5E-15 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 Pfam PF07724 AAA domain (Cdc48 subfamily) 641 810 1.4E-51 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 200 248 2.0E-15 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 123 171 3.1E-7 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 816 893 4.7E-20 T 19-04-2016 IPR019489 Clp ATPase, C-terminal ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 SUPERFAMILY SSF52540 263 572 3.91E-74 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 Gene3D G3DSA:3.40.50.300 596 826 1.0E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 PANTHER PTHR11638 101 928 0.0 T 19-04-2016 ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 SMART SM01086 816 907 3.2E-24 T 19-04-2016 IPR019489 Clp ATPase, C-terminal ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 SMART SM00382 302 449 7.5E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 SMART SM00382 642 789 6.1E-12 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 Gene3D G3DSA:1.10.8.60 827 915 3.0E-23 T 19-04-2016 ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 676 694 - T 19-04-2016 IPR028299 ClpA/B, conserved site 2 ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 Gene3D G3DSA:1.10.1780.10 111 248 5.7E-35 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 PANTHER PTHR11638:SF80 101 928 0.0 T 19-04-2016 ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 Gene3D G3DSA:3.40.50.300 263 448 3.1E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 691 709 1.4E-41 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 753 767 1.4E-41 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 720 738 1.4E-41 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.4E-41 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 SUPERFAMILY SSF52540 591 887 3.82E-78 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 SUPERFAMILY SSF81923 112 249 5.1E-24 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 ALIDE2_RS10285 08bcd76d4b7113bbdb0e236ba179b9d1 949 Gene3D G3DSA:1.10.8.60 450 533 3.9E-32 T 19-04-2016 ALIDE2_RS20460 d6abbae0372210cde208c387329cbeca 152 SUPERFAMILY SSF69118 7 144 2.11E-47 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS20460 d6abbae0372210cde208c387329cbeca 152 Gene3D G3DSA:1.20.1290.10 2 148 2.6E-56 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS20460 d6abbae0372210cde208c387329cbeca 152 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 94 3.9E-21 T 19-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS20460 d6abbae0372210cde208c387329cbeca 152 PANTHER PTHR34846 30 143 5.7E-13 T 19-04-2016 ALIDE2_RS20460 d6abbae0372210cde208c387329cbeca 152 PANTHER PTHR34846:SF2 30 143 5.7E-13 T 19-04-2016 ALIDE2_RS20460 d6abbae0372210cde208c387329cbeca 152 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 78 2.1E-18 T 19-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS12765 aed69d6ad171c82799a2d0b772a8dbff 356 Pfam PF13406 Transglycosylase SLT domain 44 346 2.3E-92 T 19-04-2016 IPR031304 Transglycosylase SLT domain 2 ALIDE2_RS12765 aed69d6ad171c82799a2d0b772a8dbff 356 SUPERFAMILY SSF53955 34 350 7.12E-77 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS12765 aed69d6ad171c82799a2d0b772a8dbff 356 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 48 349 1.7E-97 T 19-04-2016 IPR011757 Lytic transglycosylase MltB ALIDE2_RS12765 aed69d6ad171c82799a2d0b772a8dbff 356 PANTHER PTHR30163 40 353 4.5E-99 T 19-04-2016 IPR011757 Lytic transglycosylase MltB ALIDE2_RS12765 aed69d6ad171c82799a2d0b772a8dbff 356 PANTHER PTHR30163:SF0 40 353 4.5E-99 T 19-04-2016 ALIDE2_RS12765 aed69d6ad171c82799a2d0b772a8dbff 356 Gene3D G3DSA:1.10.530.10 132 146 3.7E-5 T 19-04-2016 ALIDE2_RS12765 aed69d6ad171c82799a2d0b772a8dbff 356 Gene3D G3DSA:1.10.530.10 199 234 3.7E-5 T 19-04-2016 ALIDE2_RS12765 aed69d6ad171c82799a2d0b772a8dbff 356 Gene3D G3DSA:1.10.530.10 90 131 1.3E-50 T 19-04-2016 ALIDE2_RS12765 aed69d6ad171c82799a2d0b772a8dbff 356 Gene3D G3DSA:1.10.530.10 235 352 1.3E-50 T 19-04-2016 ALIDE2_RS17830 4ac414b9ef6a857464a346b68abe403f 258 PANTHER PTHR24220 27 253 3.6E-76 T 19-04-2016 ALIDE2_RS17830 4ac414b9ef6a857464a346b68abe403f 258 SUPERFAMILY SSF52540 25 244 9.44E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17830 4ac414b9ef6a857464a346b68abe403f 258 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS17830 4ac414b9ef6a857464a346b68abe403f 258 SMART SM00382 50 230 2.0E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS17830 4ac414b9ef6a857464a346b68abe403f 258 Pfam PF00005 ABC transporter 42 174 4.6E-28 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS17830 4ac414b9ef6a857464a346b68abe403f 258 Gene3D G3DSA:3.40.50.300 25 249 4.1E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01515 c8d402a3c6bbfdc6d8c87b6ba721592e 289 PANTHER PTHR11795:SF371 9 286 1.7E-86 T 19-04-2016 ALIDE2_RS01515 c8d402a3c6bbfdc6d8c87b6ba721592e 289 PANTHER PTHR11795 9 286 1.7E-86 T 19-04-2016 ALIDE2_RS01515 c8d402a3c6bbfdc6d8c87b6ba721592e 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 276 3.9E-42 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS09640 625fa332b0ac3d082719ff235f246884 302 SUPERFAMILY SSF52540 34 228 4.86E-17 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09640 625fa332b0ac3d082719ff235f246884 302 Pfam PF05621 Bacterial TniB protein 27 278 1.4E-103 T 19-04-2016 IPR008868 Bacterial TniB ALIDE2_RS09640 625fa332b0ac3d082719ff235f246884 302 SMART SM00382 60 207 0.0077 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS09640 625fa332b0ac3d082719ff235f246884 302 Gene3D G3DSA:3.40.50.300 26 207 1.7E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04345 3df5ca547e39329e71040c3c9e7e41d0 292 Pfam PF01478 Type IV leader peptidase family 139 247 2.0E-24 T 19-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 ALIDE2_RS04345 3df5ca547e39329e71040c3c9e7e41d0 292 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 215 226 4.7E-25 T 19-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- ALIDE2_RS04345 3df5ca547e39329e71040c3c9e7e41d0 292 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 146 163 4.7E-25 T 19-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- ALIDE2_RS04345 3df5ca547e39329e71040c3c9e7e41d0 292 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 204 214 4.7E-25 T 19-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- ALIDE2_RS04345 3df5ca547e39329e71040c3c9e7e41d0 292 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 227 242 4.7E-25 T 19-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- ALIDE2_RS04345 3df5ca547e39329e71040c3c9e7e41d0 292 PANTHER PTHR30487:SF0 10 32 8.1E-96 T 19-04-2016 ALIDE2_RS04345 3df5ca547e39329e71040c3c9e7e41d0 292 PANTHER PTHR30487:SF0 60 282 8.1E-96 T 19-04-2016 ALIDE2_RS04345 3df5ca547e39329e71040c3c9e7e41d0 292 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 14 127 4.0E-35 T 19-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- ALIDE2_RS04345 3df5ca547e39329e71040c3c9e7e41d0 292 PANTHER PTHR30487 10 32 8.1E-96 T 19-04-2016 ALIDE2_RS04345 3df5ca547e39329e71040c3c9e7e41d0 292 PANTHER PTHR30487 60 282 8.1E-96 T 19-04-2016 ALIDE2_RS17750 9043fc9b827fc8a740216f760f047e9e 142 SUPERFAMILY SSF49764 9 141 4.97E-38 T 19-04-2016 IPR008978 HSP20-like chaperone ALIDE2_RS17750 9043fc9b827fc8a740216f760f047e9e 142 PANTHER PTHR11527 9 132 2.3E-27 T 19-04-2016 IPR031107 Small heat shock protein HSP20 ALIDE2_RS17750 9043fc9b827fc8a740216f760f047e9e 142 Pfam PF00011 Hsp20/alpha crystallin family 41 136 5.0E-22 T 19-04-2016 IPR002068 Alpha crystallin/Hsp20 domain ALIDE2_RS17750 9043fc9b827fc8a740216f760f047e9e 142 Gene3D G3DSA:2.60.40.790 9 142 1.6E-36 T 19-04-2016 IPR008978 HSP20-like chaperone ALIDE2_RS11505 51ee4a32b95f52a9943f461d38091e5f 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 195 213 2.7E-28 T 19-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ALIDE2_RS11505 51ee4a32b95f52a9943f461d38091e5f 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 2.7E-28 T 19-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ALIDE2_RS11505 51ee4a32b95f52a9943f461d38091e5f 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 226 247 2.7E-28 T 19-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ALIDE2_RS11505 51ee4a32b95f52a9943f461d38091e5f 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 2.7E-28 T 19-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ALIDE2_RS11505 51ee4a32b95f52a9943f461d38091e5f 458 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 316 1.4E-125 T 19-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 ALIDE2_RS11505 51ee4a32b95f52a9943f461d38091e5f 458 SMART SM00840 346 401 4.9E-23 T 19-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 ALIDE2_RS11505 51ee4a32b95f52a9943f461d38091e5f 458 Gene3D G3DSA:3.40.50.620 20 309 1.5E-104 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS11505 51ee4a32b95f52a9943f461d38091e5f 458 Gene3D G3DSA:1.20.120.640 312 385 1.5E-18 T 19-04-2016 ALIDE2_RS11505 51ee4a32b95f52a9943f461d38091e5f 458 PANTHER PTHR10890 1 455 7.2E-219 T 19-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ALIDE2_RS11505 51ee4a32b95f52a9943f461d38091e5f 458 Pfam PF09190 DALR domain 346 401 1.4E-15 T 19-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 ALIDE2_RS11505 51ee4a32b95f52a9943f461d38091e5f 458 SUPERFAMILY SSF52374 3 316 2.65E-94 T 19-04-2016 ALIDE2_RS11505 51ee4a32b95f52a9943f461d38091e5f 458 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 455 2.7E-159 T 19-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 ALIDE2_RS11505 51ee4a32b95f52a9943f461d38091e5f 458 SUPERFAMILY SSF47323 320 455 1.2E-32 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS11505 51ee4a32b95f52a9943f461d38091e5f 458 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 457 37.596 T 19-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 ALIDE2_RS09935 fcaf8226ded0140f082ba79f481a2ee3 239 Pfam PF01936 NYN domain 7 141 3.4E-32 T 19-04-2016 IPR021139 NYN domain, limkain-b1-type ALIDE2_RS09935 fcaf8226ded0140f082ba79f481a2ee3 239 PANTHER PTHR35811:SF1 7 215 1.9E-48 T 19-04-2016 ALIDE2_RS09935 fcaf8226ded0140f082ba79f481a2ee3 239 PANTHER PTHR35811 7 215 1.9E-48 T 19-04-2016 ALIDE2_RS09935 fcaf8226ded0140f082ba79f481a2ee3 239 Gene3D G3DSA:3.40.50.1010 3 142 6.4E-31 T 19-04-2016 IPR029060 PIN domain-like ALIDE2_RS09935 fcaf8226ded0140f082ba79f481a2ee3 239 Pfam PF12872 OST-HTH/LOTUS domain 168 226 3.2E-14 T 19-04-2016 IPR025605 OST-HTH/LOTUS domain ALIDE2_RS14075 d3de870f4bf2130da15b1c695e97507e 339 Pfam PF00892 EamA-like transporter family 188 324 1.1E-14 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS14075 d3de870f4bf2130da15b1c695e97507e 339 Pfam PF00892 EamA-like transporter family 31 162 1.2E-18 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS14075 d3de870f4bf2130da15b1c695e97507e 339 PANTHER PTHR12715 31 328 3.3E-53 T 19-04-2016 ALIDE2_RS14075 d3de870f4bf2130da15b1c695e97507e 339 SUPERFAMILY SSF103481 65 167 1.09E-15 T 19-04-2016 ALIDE2_RS14075 d3de870f4bf2130da15b1c695e97507e 339 SUPERFAMILY SSF103481 227 328 4.45E-11 T 19-04-2016 ALIDE2_RS14075 d3de870f4bf2130da15b1c695e97507e 339 PANTHER PTHR12715:SF11 31 328 3.3E-53 T 19-04-2016 ALIDE2_RS20470 5fe1270aea3ddbadb275cbc16592b3e3 370 PANTHER PTHR30483 8 370 4.3E-47 T 19-04-2016 ALIDE2_RS20470 5fe1270aea3ddbadb275cbc16592b3e3 370 Gene3D G3DSA:3.40.50.2300 149 299 8.4E-22 T 19-04-2016 ALIDE2_RS20470 5fe1270aea3ddbadb275cbc16592b3e3 370 SUPERFAMILY SSF53822 24 367 4.07E-72 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS20470 5fe1270aea3ddbadb275cbc16592b3e3 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 46 62 2.3E-5 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS20470 5fe1270aea3ddbadb275cbc16592b3e3 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 241 259 2.3E-5 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS20470 5fe1270aea3ddbadb275cbc16592b3e3 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 65 83 2.3E-5 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS20470 5fe1270aea3ddbadb275cbc16592b3e3 370 Gene3D G3DSA:3.40.50.2300 20 147 1.6E-37 T 19-04-2016 ALIDE2_RS20470 5fe1270aea3ddbadb275cbc16592b3e3 370 Gene3D G3DSA:3.40.50.2300 300 353 1.6E-37 T 19-04-2016 ALIDE2_RS20470 5fe1270aea3ddbadb275cbc16592b3e3 370 Pfam PF13458 Periplasmic binding protein 23 353 9.8E-61 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 Pfam PF00009 Elongation factor Tu GTP binding domain 3 200 1.7E-55 T 19-04-2016 ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 Pfam PF03144 Elongation factor Tu domain 2 223 294 4.5E-8 T 19-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 Gene3D G3DSA:3.40.50.300 2 208 6.4E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 19-04-2016 IPR031157 Tr-type G domain, conserved site ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 Pfam PF00679 Elongation factor G C-terminus 402 484 7.6E-19 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 PANTHER PTHR23115:SF14 4 597 3.6E-266 T 19-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 Gene3D G3DSA:2.40.30.10 209 308 2.3E-25 T 19-04-2016 ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 SUPERFAMILY SSF50447 151 304 2.21E-30 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 603 7.2E-275 T 19-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 Gene3D G3DSA:3.30.70.870 309 403 8.5E-37 T 19-04-2016 ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 SUPERFAMILY SSF54980 403 517 7.19E-28 T 19-04-2016 IPR009022 Elongation factor G, III-V domain ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 136 1.1E-24 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 Gene3D G3DSA:2.40.50.250 487 581 4.0E-37 T 19-04-2016 ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 PANTHER PTHR23115 4 597 3.6E-266 T 19-04-2016 ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 SUPERFAMILY SSF52540 3 211 2.28E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 Gene3D G3DSA:3.30.70.240 404 484 4.5E-29 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 SUPERFAMILY SSF54980 307 392 4.68E-14 T 19-04-2016 IPR009022 Elongation factor G, III-V domain ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.0E-15 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.0E-15 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.0E-15 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 PRINTS PR00315 GTP-binding elongation factor signature 7 20 1.0E-15 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS10680 7df4b18f5ec92a0d6420cf0ed6135947 609 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.0E-15 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS00780 0176b0ac003fde5ba9f41bd97e88cee9 427 PANTHER PTHR21432 5 418 2.1E-118 T 19-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 ALIDE2_RS00780 0176b0ac003fde5ba9f41bd97e88cee9 427 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 12 156 5.0E-10 T 19-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 ALIDE2_RS00780 0176b0ac003fde5ba9f41bd97e88cee9 427 Gene3D G3DSA:3.40.810.20 180 413 5.9E-43 T 19-04-2016 ALIDE2_RS00780 0176b0ac003fde5ba9f41bd97e88cee9 427 Gene3D G3DSA:3.40.1080.10 5 175 2.3E-41 T 19-04-2016 ALIDE2_RS00780 0176b0ac003fde5ba9f41bd97e88cee9 427 PANTHER PTHR21432:SF18 5 418 2.1E-118 T 19-04-2016 ALIDE2_RS00780 0176b0ac003fde5ba9f41bd97e88cee9 427 SUPERFAMILY SSF100950 9 215 1.61E-33 T 19-04-2016 ALIDE2_RS00780 0176b0ac003fde5ba9f41bd97e88cee9 427 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 264 413 2.9E-43 T 19-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain ALIDE2_RS00780 0176b0ac003fde5ba9f41bd97e88cee9 427 SUPERFAMILY SSF100950 181 417 2.3E-54 T 19-04-2016 ALIDE2_RS15485 c3c020d74f8447bca3fda81dfa454330 555 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 547 5.7E-235 T 19-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 ALIDE2_RS15485 c3c020d74f8447bca3fda81dfa454330 555 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 549 52.757 T 19-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 ALIDE2_RS15485 c3c020d74f8447bca3fda81dfa454330 555 PANTHER PTHR10277 1 555 1.2E-257 T 19-04-2016 ALIDE2_RS15485 c3c020d74f8447bca3fda81dfa454330 555 Pfam PF08502 LeuA allosteric (dimerisation) domain 420 547 2.1E-28 T 19-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 ALIDE2_RS15485 c3c020d74f8447bca3fda81dfa454330 555 Gene3D G3DSA:3.20.20.70 9 392 7.2E-143 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS15485 c3c020d74f8447bca3fda81dfa454330 555 Pfam PF00682 HMGL-like 31 311 9.3E-72 T 19-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 ALIDE2_RS15485 c3c020d74f8447bca3fda81dfa454330 555 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 19-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 ALIDE2_RS15485 c3c020d74f8447bca3fda81dfa454330 555 PANTHER PTHR10277:SF28 1 555 1.2E-257 T 19-04-2016 ALIDE2_RS15485 c3c020d74f8447bca3fda81dfa454330 555 SUPERFAMILY SSF110921 444 546 1.01E-31 T 19-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 ALIDE2_RS15485 c3c020d74f8447bca3fda81dfa454330 555 SUPERFAMILY SSF51569 20 328 3.11E-98 T 19-04-2016 ALIDE2_RS15485 c3c020d74f8447bca3fda81dfa454330 555 SUPERFAMILY SSF89000 386 434 1.22E-14 T 19-04-2016 ALIDE2_RS15485 c3c020d74f8447bca3fda81dfa454330 555 SMART SM00917 420 548 1.7E-35 T 19-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 ALIDE2_RS15485 c3c020d74f8447bca3fda81dfa454330 555 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 19-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 Gene3D G3DSA:3.40.47.10 200 281 3.0E-69 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 Gene3D G3DSA:3.40.47.10 4 125 3.0E-69 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 19-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 19-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 SUPERFAMILY SSF53901 4 275 1.03E-79 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 Pfam PF00108 Thiolase, N-terminal domain 5 268 1.1E-75 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 19-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 PANTHER PTHR18919 1 400 1.6E-226 T 19-04-2016 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 Gene3D G3DSA:3.40.47.10 152 199 2.8E-56 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 Gene3D G3DSA:3.40.47.10 282 399 2.8E-56 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 PIRSF PIRSF000429 1 400 2.8E-130 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 Pfam PF02803 Thiolase, C-terminal domain 276 399 1.3E-43 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 SUPERFAMILY SSF53901 276 399 3.76E-44 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 400 3.8E-214 T 19-04-2016 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 PANTHER PTHR18919:SF91 1 400 1.6E-226 T 19-04-2016 ALIDE2_RS19480 bd7e343dd59a88b6adc41c1efc78c8e5 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 8.5E-136 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS09870 f4daf78a6c2440d356c954dc2f90c382 100 PANTHER PTHR33175:SF5 1 94 1.3E-41 T 19-04-2016 ALIDE2_RS09870 f4daf78a6c2440d356c954dc2f90c382 100 SUPERFAMILY SSF47729 1 92 1.0E-31 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ALIDE2_RS09870 f4daf78a6c2440d356c954dc2f90c382 100 SMART SM00411 1 91 7.8E-43 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS09870 f4daf78a6c2440d356c954dc2f90c382 100 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.6E-32 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS09870 f4daf78a6c2440d356c954dc2f90c382 100 PANTHER PTHR33175 1 94 1.3E-41 T 19-04-2016 ALIDE2_RS09870 f4daf78a6c2440d356c954dc2f90c382 100 Gene3D G3DSA:4.10.520.10 1 92 5.1E-36 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ALIDE2_RS09870 f4daf78a6c2440d356c954dc2f90c382 100 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.1E-17 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS09870 f4daf78a6c2440d356c954dc2f90c382 100 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.1E-17 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS09870 f4daf78a6c2440d356c954dc2f90c382 100 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.1E-17 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS17690 bc08dbc42f0e8d1e75cb518c761d63a6 529 PANTHER PTHR24220 21 392 1.7E-150 T 19-04-2016 ALIDE2_RS17690 bc08dbc42f0e8d1e75cb518c761d63a6 529 SUPERFAMILY SSF52540 18 237 1.08E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17690 bc08dbc42f0e8d1e75cb518c761d63a6 529 SUPERFAMILY SSF52540 282 495 6.62E-29 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17690 bc08dbc42f0e8d1e75cb518c761d63a6 529 Gene3D G3DSA:3.40.50.300 18 237 1.3E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17690 bc08dbc42f0e8d1e75cb518c761d63a6 529 Gene3D G3DSA:3.40.50.300 264 497 1.4E-29 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17690 bc08dbc42f0e8d1e75cb518c761d63a6 529 SMART SM00382 44 230 1.9E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS17690 bc08dbc42f0e8d1e75cb518c761d63a6 529 PANTHER PTHR24220:SF239 21 392 1.7E-150 T 19-04-2016 ALIDE2_RS17690 bc08dbc42f0e8d1e75cb518c761d63a6 529 Pfam PF00005 ABC transporter 286 439 7.6E-6 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS17690 bc08dbc42f0e8d1e75cb518c761d63a6 529 Pfam PF00005 ABC transporter 36 180 1.7E-35 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS17690 bc08dbc42f0e8d1e75cb518c761d63a6 529 ProSitePatterns PS00211 ABC transporters family signature. 412 426 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS17690 bc08dbc42f0e8d1e75cb518c761d63a6 529 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS11175 527466e222bb08ed78b0043132e047da 438 SMART SM00388 214 281 0.0089 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS11175 527466e222bb08ed78b0043132e047da 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 427 9.5E-16 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS11175 527466e222bb08ed78b0043132e047da 438 Gene3D G3DSA:3.30.565.10 291 428 2.5E-24 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS11175 527466e222bb08ed78b0043132e047da 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 2.1E-8 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS11175 527466e222bb08ed78b0043132e047da 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 2.1E-8 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS11175 527466e222bb08ed78b0043132e047da 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 2.1E-8 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS11175 527466e222bb08ed78b0043132e047da 438 PANTHER PTHR24423 191 427 4.2E-29 T 19-04-2016 ALIDE2_RS11175 527466e222bb08ed78b0043132e047da 438 SUPERFAMILY SSF47384 203 275 1.02E-6 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS11175 527466e222bb08ed78b0043132e047da 438 SMART SM00387 323 428 3.0E-21 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS11175 527466e222bb08ed78b0043132e047da 438 SUPERFAMILY SSF55874 310 427 2.1E-25 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS06355 e6d5983368d84af00746b98d9b589c1d 213 Gene3D G3DSA:1.10.1520.10 2 126 2.1E-41 T 19-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 ALIDE2_RS06355 e6d5983368d84af00746b98d9b589c1d 213 SMART SM00358 141 209 1.1E-17 T 19-04-2016 IPR014720 Double-stranded RNA-binding domain ALIDE2_RS06355 e6d5983368d84af00746b98d9b589c1d 213 Gene3D G3DSA:3.30.160.20 139 209 4.3E-23 T 19-04-2016 IPR014720 Double-stranded RNA-binding domain ALIDE2_RS06355 e6d5983368d84af00746b98d9b589c1d 213 PANTHER PTHR11207 2 210 6.0E-71 T 19-04-2016 ALIDE2_RS06355 e6d5983368d84af00746b98d9b589c1d 213 SUPERFAMILY SSF54768 94 208 4.24E-26 T 19-04-2016 ALIDE2_RS06355 e6d5983368d84af00746b98d9b589c1d 213 Hamap MF_00104 Ribonuclease 3 [rnc]. 1 205 26.789 T 19-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 ALIDE2_RS06355 e6d5983368d84af00746b98d9b589c1d 213 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 2 208 4.0E-67 T 19-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 ALIDE2_RS06355 e6d5983368d84af00746b98d9b589c1d 213 SMART SM00535 6 139 6.6E-43 T 19-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 ALIDE2_RS06355 e6d5983368d84af00746b98d9b589c1d 213 SUPERFAMILY SSF69065 2 141 2.27E-42 T 19-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 ALIDE2_RS06355 e6d5983368d84af00746b98d9b589c1d 213 ProSitePatterns PS00517 Ribonuclease III family signature. 23 31 - T 19-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 ALIDE2_RS06355 e6d5983368d84af00746b98d9b589c1d 213 Pfam PF14622 Ribonuclease-III-like 4 123 2.5E-36 T 19-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 ALIDE2_RS06355 e6d5983368d84af00746b98d9b589c1d 213 Pfam PF00035 Double-stranded RNA binding motif 141 208 4.8E-12 T 19-04-2016 IPR014720 Double-stranded RNA-binding domain ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 19-04-2016 IPR031157 Tr-type G domain, conserved site ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 SUPERFAMILY SSF50447 207 303 1.81E-31 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.6E-18 T 19-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 PANTHER PTHR23115 1 395 9.7E-265 T 19-04-2016 ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 SUPERFAMILY SSF52540 5 221 1.12E-60 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 4.8E-34 T 19-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 7.2E-231 T 19-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 Gene3D G3DSA:2.40.30.10 302 395 3.2E-47 T 19-04-2016 ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 SUPERFAMILY SSF50465 304 396 6.48E-37 T 19-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 Gene3D G3DSA:3.40.50.300 5 213 1.4E-68 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 4.0E-59 T 19-04-2016 ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 8.0E-16 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 PANTHER PTHR23115:SF151 1 395 9.7E-265 T 19-04-2016 ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 Gene3D G3DSA:2.40.30.10 214 300 1.7E-37 T 19-04-2016 ALIDE2_RS01750 478b34c618fc4d375c93474acba69f77 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.617 T 19-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 19-04-2016 IPR031157 Tr-type G domain, conserved site ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 SUPERFAMILY SSF50447 207 303 1.81E-31 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.6E-18 T 19-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 PANTHER PTHR23115 1 395 9.7E-265 T 19-04-2016 ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 SUPERFAMILY SSF52540 5 221 1.12E-60 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 4.8E-34 T 19-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 7.2E-231 T 19-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 Gene3D G3DSA:2.40.30.10 302 395 3.2E-47 T 19-04-2016 ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 SUPERFAMILY SSF50465 304 396 6.48E-37 T 19-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 Gene3D G3DSA:3.40.50.300 5 213 1.4E-68 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 4.0E-59 T 19-04-2016 ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 8.0E-16 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 PANTHER PTHR23115:SF151 1 395 9.7E-265 T 19-04-2016 ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 Gene3D G3DSA:2.40.30.10 214 300 1.7E-37 T 19-04-2016 ALIDE2_RS02010 478b34c618fc4d375c93474acba69f77 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.617 T 19-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 ALIDE2_RS05375 9228735c067740239d05d7f61b087831 313 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 289 1.3E-61 T 19-04-2016 IPR021134 Bestrophin/UPF0187 ALIDE2_RS05375 9228735c067740239d05d7f61b087831 313 PANTHER PTHR33281:SF3 10 303 5.6E-78 T 19-04-2016 ALIDE2_RS05375 9228735c067740239d05d7f61b087831 313 PANTHER PTHR33281 10 303 5.6E-78 T 19-04-2016 ALIDE2_RS05430 9228735c067740239d05d7f61b087831 313 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 289 1.3E-61 T 19-04-2016 IPR021134 Bestrophin/UPF0187 ALIDE2_RS05430 9228735c067740239d05d7f61b087831 313 PANTHER PTHR33281:SF3 10 303 5.6E-78 T 19-04-2016 ALIDE2_RS05430 9228735c067740239d05d7f61b087831 313 PANTHER PTHR33281 10 303 5.6E-78 T 19-04-2016 ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 322 334 1.8E-64 T 19-04-2016 ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 1.8E-64 T 19-04-2016 ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 232 253 1.8E-64 T 19-04-2016 ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 427 446 1.8E-64 T 19-04-2016 ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 1.8E-64 T 19-04-2016 ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 1.8E-64 T 19-04-2016 ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 254 280 1.8E-64 T 19-04-2016 ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 664 9.2E-242 T 19-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 123 6.2E-26 T 19-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 PANTHER PTHR22773 1 617 3.5E-248 T 19-04-2016 ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 Pfam PF00361 Proton-conducting membrane transporter 135 413 1.4E-81 T 19-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 PANTHER PTHR22773:SF50 1 617 3.5E-248 T 19-04-2016 ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 272 294 1.9E-14 T 19-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 1.9E-14 T 19-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 60 84 1.9E-14 T 19-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ALIDE2_RS19935 59341b3e631b6ace07c0fc4590ed817a 669 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 426 448 1.9E-14 T 19-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ALIDE2_RS05525 be836f0422696a2173d7f6727abb6492 563 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 127 137 - T 19-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS05525 be836f0422696a2173d7f6727abb6492 563 PANTHER PTHR21000 1 563 0.0 T 19-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS05525 be836f0422696a2173d7f6727abb6492 563 SUPERFAMILY SSF52016 384 562 3.22E-56 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS05525 be836f0422696a2173d7f6727abb6492 563 SUPERFAMILY SSF143975 4 382 9.68E-138 T 19-04-2016 ALIDE2_RS05525 be836f0422696a2173d7f6727abb6492 563 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 9 561 44.415 T 19-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS05525 be836f0422696a2173d7f6727abb6492 563 PANTHER PTHR21000:SF5 1 563 0.0 T 19-04-2016 ALIDE2_RS05525 be836f0422696a2173d7f6727abb6492 563 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 469 480 - T 19-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS05525 be836f0422696a2173d7f6727abb6492 563 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 22 561 8.5E-227 T 19-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS05525 be836f0422696a2173d7f6727abb6492 563 Pfam PF00920 Dehydratase family 39 558 7.2E-207 T 19-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS18255 564d4378cb4dfe004423fb2b809bf7f6 329 PANTHER PTHR38684 300 329 1.5E-23 T 19-04-2016 ALIDE2_RS18255 564d4378cb4dfe004423fb2b809bf7f6 329 PANTHER PTHR38684 2 271 1.5E-23 T 19-04-2016 ALIDE2_RS18255 564d4378cb4dfe004423fb2b809bf7f6 329 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 329 64.772 T 19-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 ALIDE2_RS18255 564d4378cb4dfe004423fb2b809bf7f6 329 Pfam PF03186 CobD/Cbib protein 37 270 5.5E-26 T 19-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 ALIDE2_RS03915 21b32630b0b39d77a234b147bbc59e82 212 SUPERFAMILY SSF46626 39 126 1.8E-22 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS03915 21b32630b0b39d77a234b147bbc59e82 212 PANTHER PTHR33751:SF3 33 212 5.6E-50 T 19-04-2016 ALIDE2_RS03915 21b32630b0b39d77a234b147bbc59e82 212 Pfam PF00034 Cytochrome c 39 114 4.5E-8 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS03915 21b32630b0b39d77a234b147bbc59e82 212 Pfam PF00034 Cytochrome c 143 210 6.6E-9 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS03915 21b32630b0b39d77a234b147bbc59e82 212 PIRSF PIRSF000005 1 212 4.7E-63 T 19-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 ALIDE2_RS03915 21b32630b0b39d77a234b147bbc59e82 212 Gene3D G3DSA:1.10.760.10 139 211 5.9E-27 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS03915 21b32630b0b39d77a234b147bbc59e82 212 Gene3D G3DSA:1.10.760.10 39 114 5.3E-28 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS03915 21b32630b0b39d77a234b147bbc59e82 212 PANTHER PTHR33751 33 212 5.6E-50 T 19-04-2016 ALIDE2_RS03915 21b32630b0b39d77a234b147bbc59e82 212 PRINTS PR00605 Class IC cytochrome C signature 46 57 8.4E-5 T 19-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 ALIDE2_RS03915 21b32630b0b39d77a234b147bbc59e82 212 PRINTS PR00605 Class IC cytochrome C signature 186 208 8.4E-5 T 19-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 ALIDE2_RS03915 21b32630b0b39d77a234b147bbc59e82 212 SUPERFAMILY SSF46626 123 210 1.43E-22 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS05460 32a34074f5d412322a150100c8c11201 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 1.5E-18 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS05460 32a34074f5d412322a150100c8c11201 243 PANTHER PTHR26402 1 225 4.5E-65 T 19-04-2016 ALIDE2_RS05460 32a34074f5d412322a150100c8c11201 243 SMART SM00448 1 113 8.8E-27 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS05460 32a34074f5d412322a150100c8c11201 243 Gene3D G3DSA:3.40.50.2300 1 124 1.5E-30 T 19-04-2016 ALIDE2_RS05460 32a34074f5d412322a150100c8c11201 243 PANTHER PTHR26402:SF405 1 225 4.5E-65 T 19-04-2016 ALIDE2_RS05460 32a34074f5d412322a150100c8c11201 243 Gene3D G3DSA:1.10.10.10 126 225 9.5E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05460 32a34074f5d412322a150100c8c11201 243 SMART SM00862 148 224 4.7E-22 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS05460 32a34074f5d412322a150100c8c11201 243 SUPERFAMILY SSF52172 1 177 3.11E-31 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS05460 32a34074f5d412322a150100c8c11201 243 Pfam PF00072 Response regulator receiver domain 5 114 1.3E-22 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS05100 d9726c293f3b3dc2695b3517447d624b 550 Gene3D G3DSA:3.40.50.970 328 515 4.7E-47 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS05100 d9726c293f3b3dc2695b3517447d624b 550 SUPERFAMILY SSF52518 1 180 5.89E-37 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS05100 d9726c293f3b3dc2695b3517447d624b 550 PANTHER PTHR18968 1 533 1.5E-201 T 19-04-2016 ALIDE2_RS05100 d9726c293f3b3dc2695b3517447d624b 550 SUPERFAMILY SSF52467 171 229 4.11E-5 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS05100 d9726c293f3b3dc2695b3517447d624b 550 PANTHER PTHR18968:SF86 1 533 1.5E-201 T 19-04-2016 ALIDE2_RS05100 d9726c293f3b3dc2695b3517447d624b 550 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 166 4.4E-35 T 19-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ALIDE2_RS05100 d9726c293f3b3dc2695b3517447d624b 550 SUPERFAMILY SSF52518 335 516 8.22E-43 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS05100 d9726c293f3b3dc2695b3517447d624b 550 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 511 1.5E-27 T 19-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ALIDE2_RS05100 d9726c293f3b3dc2695b3517447d624b 550 Gene3D G3DSA:3.40.50.970 1 180 1.5E-41 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS03335 7620701fc8227c32ad0814f27e992706 474 SUPERFAMILY SSF51161 278 455 1.18E-43 T 19-04-2016 IPR011004 Trimeric LpxA-like ALIDE2_RS03335 7620701fc8227c32ad0814f27e992706 474 Gene3D G3DSA:3.90.550.10 2 250 3.2E-70 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS03335 7620701fc8227c32ad0814f27e992706 474 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 469 40.217 T 19-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 ALIDE2_RS03335 7620701fc8227c32ad0814f27e992706 474 Gene3D G3DSA:2.160.10.10 340 469 2.5E-32 T 19-04-2016 ALIDE2_RS03335 7620701fc8227c32ad0814f27e992706 474 PANTHER PTHR22572 5 466 7.0E-189 T 19-04-2016 ALIDE2_RS03335 7620701fc8227c32ad0814f27e992706 474 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 471 2.7E-172 T 19-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 ALIDE2_RS03335 7620701fc8227c32ad0814f27e992706 474 PANTHER PTHR22572:SF115 5 466 7.0E-189 T 19-04-2016 ALIDE2_RS03335 7620701fc8227c32ad0814f27e992706 474 SUPERFAMILY SSF53448 5 258 5.86E-63 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS03335 7620701fc8227c32ad0814f27e992706 474 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 412 446 2.7E-5 T 19-04-2016 IPR001451 Hexapeptide repeat ALIDE2_RS03335 7620701fc8227c32ad0814f27e992706 474 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 335 369 1.2E-6 T 19-04-2016 IPR001451 Hexapeptide repeat ALIDE2_RS03335 7620701fc8227c32ad0814f27e992706 474 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 297 329 1.6E-6 T 19-04-2016 IPR001451 Hexapeptide repeat ALIDE2_RS03335 7620701fc8227c32ad0814f27e992706 474 Pfam PF12804 MobA-like NTP transferase domain 7 130 1.6E-20 T 19-04-2016 IPR025877 MobA-like NTP transferase ALIDE2_RS03335 7620701fc8227c32ad0814f27e992706 474 Gene3D G3DSA:2.160.10.10 251 339 9.4E-14 T 19-04-2016 ALIDE2_RS07575 7489d97f7296b09cc5dd3519ae51e01e 401 Pfam PF02803 Thiolase, C-terminal domain 275 400 1.0E-43 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS07575 7489d97f7296b09cc5dd3519ae51e01e 401 SUPERFAMILY SSF53901 4 274 1.75E-74 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS07575 7489d97f7296b09cc5dd3519ae51e01e 401 Gene3D G3DSA:3.40.47.10 281 400 1.5E-60 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS07575 7489d97f7296b09cc5dd3519ae51e01e 401 Gene3D G3DSA:3.40.47.10 161 198 1.5E-60 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS07575 7489d97f7296b09cc5dd3519ae51e01e 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 5.2E-132 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS07575 7489d97f7296b09cc5dd3519ae51e01e 401 SUPERFAMILY SSF53901 275 400 6.01E-42 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS07575 7489d97f7296b09cc5dd3519ae51e01e 401 PANTHER PTHR18919 1 401 9.2E-151 T 19-04-2016 ALIDE2_RS07575 7489d97f7296b09cc5dd3519ae51e01e 401 Gene3D G3DSA:3.40.47.10 199 278 8.7E-57 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS07575 7489d97f7296b09cc5dd3519ae51e01e 401 Gene3D G3DSA:3.40.47.10 4 123 8.7E-57 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS07575 7489d97f7296b09cc5dd3519ae51e01e 401 PIRSF PIRSF000429 1 401 2.1E-135 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS07575 7489d97f7296b09cc5dd3519ae51e01e 401 Pfam PF00108 Thiolase, N-terminal domain 5 267 1.1E-69 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS01165 208555f25da9213a72c57bbdadf77803 425 Pfam PF07690 Major Facilitator Superfamily 9 342 4.8E-14 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS01165 208555f25da9213a72c57bbdadf77803 425 PANTHER PTHR23513:SF8 1 425 2.0E-72 T 19-04-2016 ALIDE2_RS01165 208555f25da9213a72c57bbdadf77803 425 Gene3D G3DSA:1.20.1250.20 3 164 5.6E-12 T 19-04-2016 ALIDE2_RS01165 208555f25da9213a72c57bbdadf77803 425 Gene3D G3DSA:1.20.1250.20 219 404 3.0E-6 T 19-04-2016 ALIDE2_RS01165 208555f25da9213a72c57bbdadf77803 425 SUPERFAMILY SSF103473 3 407 1.83E-25 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS01165 208555f25da9213a72c57bbdadf77803 425 PANTHER PTHR23513 1 425 2.0E-72 T 19-04-2016 ALIDE2_RS23340 6cdb1ee77351c4cc7f82aeacd4e91183 471 SUPERFAMILY SSF54534 326 426 3.47E-31 T 19-04-2016 ALIDE2_RS23340 6cdb1ee77351c4cc7f82aeacd4e91183 471 Pfam PF00639 PPIC-type PPIASE domain 220 314 6.2E-17 T 19-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 ALIDE2_RS23340 6cdb1ee77351c4cc7f82aeacd4e91183 471 Pfam PF00639 PPIC-type PPIASE domain 331 421 2.0E-23 T 19-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 ALIDE2_RS23340 6cdb1ee77351c4cc7f82aeacd4e91183 471 SUPERFAMILY SSF109998 67 244 1.37E-39 T 19-04-2016 IPR027304 Trigger factor/SurA domain ALIDE2_RS23340 6cdb1ee77351c4cc7f82aeacd4e91183 471 Pfam PF09312 SurA N-terminal domain 67 183 4.2E-33 T 19-04-2016 IPR015391 SurA N-terminal ALIDE2_RS23340 6cdb1ee77351c4cc7f82aeacd4e91183 471 Hamap MF_01183 Chaperone SurA [surA]. 14 469 32.109 T 19-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 ALIDE2_RS23340 6cdb1ee77351c4cc7f82aeacd4e91183 471 PANTHER PTHR10657 24 467 8.0E-80 T 19-04-2016 ALIDE2_RS23340 6cdb1ee77351c4cc7f82aeacd4e91183 471 SUPERFAMILY SSF54534 216 318 7.2E-23 T 19-04-2016 ALIDE2_RS23340 6cdb1ee77351c4cc7f82aeacd4e91183 471 Gene3D G3DSA:3.10.50.40 213 323 4.0E-26 T 19-04-2016 ALIDE2_RS23340 6cdb1ee77351c4cc7f82aeacd4e91183 471 Gene3D G3DSA:3.10.50.40 326 447 3.8E-36 T 19-04-2016 ALIDE2_RS23340 6cdb1ee77351c4cc7f82aeacd4e91183 471 PANTHER PTHR10657:SF16 24 467 8.0E-80 T 19-04-2016 ALIDE2_RS23340 6cdb1ee77351c4cc7f82aeacd4e91183 471 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 363 383 - T 19-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site ALIDE2_RS18315 7e189bf2830cd8d94e3d79b2b2cea6e8 242 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS18315 7e189bf2830cd8d94e3d79b2b2cea6e8 242 Pfam PF00005 ABC transporter 26 170 4.8E-26 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS18315 7e189bf2830cd8d94e3d79b2b2cea6e8 242 PANTHER PTHR24220 11 242 5.3E-119 T 19-04-2016 ALIDE2_RS18315 7e189bf2830cd8d94e3d79b2b2cea6e8 242 SMART SM00382 34 226 1.6E-5 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS18315 7e189bf2830cd8d94e3d79b2b2cea6e8 242 PANTHER PTHR24220:SF568 11 242 5.3E-119 T 19-04-2016 ALIDE2_RS18315 7e189bf2830cd8d94e3d79b2b2cea6e8 242 Gene3D G3DSA:3.40.50.300 6 239 4.2E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18315 7e189bf2830cd8d94e3d79b2b2cea6e8 242 SUPERFAMILY SSF52540 8 240 2.0E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18315 7e189bf2830cd8d94e3d79b2b2cea6e8 242 PIRSF PIRSF039137 5 242 4.4E-105 T 19-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 ALIDE2_RS13330 9929280811a7955f2c060c97481efc6c 298 PANTHER PTHR20941 14 277 4.9E-105 T 19-04-2016 ALIDE2_RS13330 9929280811a7955f2c060c97481efc6c 298 Gene3D G3DSA:3.20.20.20 12 274 1.4E-103 T 19-04-2016 IPR000489 Pterin-binding domain GO:0042558 ALIDE2_RS13330 9929280811a7955f2c060c97481efc6c 298 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 19-04-2016 IPR000489 Pterin-binding domain GO:0042558 ALIDE2_RS13330 9929280811a7955f2c060c97481efc6c 298 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 5.8E-92 T 19-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 ALIDE2_RS13330 9929280811a7955f2c060c97481efc6c 298 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 19-04-2016 IPR000489 Pterin-binding domain GO:0042558 ALIDE2_RS13330 9929280811a7955f2c060c97481efc6c 298 SUPERFAMILY SSF51717 2 275 1.07E-97 T 19-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 ALIDE2_RS13330 9929280811a7955f2c060c97481efc6c 298 Pfam PF00809 Pterin binding enzyme 18 257 3.8E-75 T 19-04-2016 IPR000489 Pterin-binding domain GO:0042558 ALIDE2_RS13330 9929280811a7955f2c060c97481efc6c 298 PANTHER PTHR20941:SF1 14 277 4.9E-105 T 19-04-2016 ALIDE2_RS13270 9cbf5025e21bcf6955feac5cdfdc77c3 233 Pfam PF00072 Response regulator receiver domain 7 119 3.8E-25 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS13270 9cbf5025e21bcf6955feac5cdfdc77c3 233 SMART SM00862 152 225 7.6E-28 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS13270 9cbf5025e21bcf6955feac5cdfdc77c3 233 SUPERFAMILY SSF46894 130 226 1.56E-28 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS13270 9cbf5025e21bcf6955feac5cdfdc77c3 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 1.8E-26 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS13270 9cbf5025e21bcf6955feac5cdfdc77c3 233 SMART SM00448 5 118 1.9E-43 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS13270 9cbf5025e21bcf6955feac5cdfdc77c3 233 SUPERFAMILY SSF52172 5 127 3.7E-42 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS13270 9cbf5025e21bcf6955feac5cdfdc77c3 233 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 6 225 2.0E-99 T 19-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 ALIDE2_RS13270 9cbf5025e21bcf6955feac5cdfdc77c3 233 Gene3D G3DSA:1.10.10.10 132 227 8.8E-34 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS13270 9cbf5025e21bcf6955feac5cdfdc77c3 233 PANTHER PTHR26402 5 225 4.3E-107 T 19-04-2016 ALIDE2_RS13270 9cbf5025e21bcf6955feac5cdfdc77c3 233 Gene3D G3DSA:3.40.50.2300 5 129 2.9E-40 T 19-04-2016 ALIDE2_RS13270 9cbf5025e21bcf6955feac5cdfdc77c3 233 PANTHER PTHR26402:SF576 5 225 4.3E-107 T 19-04-2016 ALIDE2_RS02200 02b9051d31ecc4e114ff62d42b06e223 505 PANTHER PTHR33908 1 365 7.6E-19 T 19-04-2016 ALIDE2_RS02200 02b9051d31ecc4e114ff62d42b06e223 505 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 62 222 3.2E-23 T 19-04-2016 ALIDE2_RS15520 d30fd9c44f285c363b8cad626f3c9f00 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 5.1E-130 T 19-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS15520 d30fd9c44f285c363b8cad626f3c9f00 338 Gene3D G3DSA:3.50.50.60 5 38 9.6E-4 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15520 d30fd9c44f285c363b8cad626f3c9f00 338 SUPERFAMILY SSF48179 183 332 2.38E-68 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS15520 d30fd9c44f285c363b8cad626f3c9f00 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 3.5E-62 T 19-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS15520 d30fd9c44f285c363b8cad626f3c9f00 338 SUPERFAMILY SSF51735 1 182 5.41E-75 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS15520 d30fd9c44f285c363b8cad626f3c9f00 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 44.548 T 19-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS15520 d30fd9c44f285c363b8cad626f3c9f00 338 PANTHER PTHR21371 1 337 4.1E-181 T 19-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS15520 d30fd9c44f285c363b8cad626f3c9f00 338 Gene3D G3DSA:1.10.1040.10 39 325 1.1E-111 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS15520 d30fd9c44f285c363b8cad626f3c9f00 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 3.2E-74 T 19-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 Pfam PF13380 CoA binding domain 16 139 7.2E-21 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 Pfam PF13549 ATP-grasp domain 481 700 4.6E-66 T 19-04-2016 ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 SUPERFAMILY SSF51735 7 146 1.14E-33 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 Gene3D G3DSA:3.40.50.261 307 457 5.4E-5 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 162 299 6.5E-48 T 19-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 PANTHER PTHR33303:SF3 463 701 1.3E-211 T 19-04-2016 ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 PANTHER PTHR33303:SF3 9 444 1.3E-211 T 19-04-2016 ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 SUPERFAMILY SSF52210 139 299 1.31E-37 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 SUPERFAMILY SSF56059 486 701 1.1E-38 T 19-04-2016 ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 Gene3D G3DSA:3.40.50.720 8 137 9.4E-37 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 SUPERFAMILY SSF52210 307 462 7.46E-28 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 Gene3D G3DSA:3.30.1490.20 499 563 7.2E-6 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 Gene3D G3DSA:3.40.50.261 138 298 3.5E-28 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 PANTHER PTHR33303 463 701 1.3E-211 T 19-04-2016 ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 PANTHER PTHR33303 9 444 1.3E-211 T 19-04-2016 ALIDE2_RS09195 16d291e8882ac7018d7635791cf502d7 705 SMART SM00881 12 107 2.0E-32 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS20505 af4378032b1ac07bab929ec37ea65c58 213 PIRSF PIRSF006386 1 201 6.8E-32 T 19-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa ALIDE2_RS20505 af4378032b1ac07bab929ec37ea65c58 213 Pfam PF01323 DSBA-like thioredoxin domain 4 189 2.6E-20 T 19-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 ALIDE2_RS20505 af4378032b1ac07bab929ec37ea65c58 213 PANTHER PTHR13887 2 191 3.2E-19 T 19-04-2016 ALIDE2_RS20505 af4378032b1ac07bab929ec37ea65c58 213 Gene3D G3DSA:3.40.30.10 1 191 1.5E-41 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS20505 af4378032b1ac07bab929ec37ea65c58 213 SUPERFAMILY SSF52833 3 193 3.36E-29 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 141 170 - T 19-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 19-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 Gene3D G3DSA:2.40.50.100 5 80 1.6E-22 T 19-04-2016 ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 Pfam PF02817 e3 binding domain 242 277 1.8E-16 T 19-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 PANTHER PTHR23151 305 549 2.1E-244 T 19-04-2016 ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 PANTHER PTHR23151 23 286 2.1E-244 T 19-04-2016 ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 SUPERFAMILY SSF51230 118 210 5.89E-23 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 Gene3D G3DSA:4.10.320.10 233 279 3.5E-19 T 19-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 Pfam PF00364 Biotin-requiring enzyme 119 190 2.2E-21 T 19-04-2016 IPR000089 Biotin/lipoyl attachment ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 Pfam PF00364 Biotin-requiring enzyme 5 76 1.8E-22 T 19-04-2016 IPR000089 Biotin/lipoyl attachment ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 SUPERFAMILY SSF47005 236 280 5.49E-12 T 19-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 324 548 2.1E-78 T 19-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 Gene3D G3DSA:2.40.50.100 117 209 1.2E-21 T 19-04-2016 ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 SUPERFAMILY SSF52777 311 549 1.78E-83 T 19-04-2016 ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 93 549 1.9E-194 T 19-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 SUPERFAMILY SSF51230 2 95 2.09E-23 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 PANTHER PTHR23151:SF68 305 549 2.1E-244 T 19-04-2016 ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 PANTHER PTHR23151:SF68 23 286 2.1E-244 T 19-04-2016 ALIDE2_RS12050 4f28f1362c280e671a54ae2794f02cf6 549 Gene3D G3DSA:3.30.559.10 313 549 8.7E-84 T 19-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain ALIDE2_RS18745 a52be5db32b3361dfab799a740f6a0b0 405 Gene3D G3DSA:1.20.1250.20 13 189 1.1E-22 T 19-04-2016 ALIDE2_RS18745 a52be5db32b3361dfab799a740f6a0b0 405 Gene3D G3DSA:1.20.1250.20 212 395 1.6E-26 T 19-04-2016 ALIDE2_RS18745 a52be5db32b3361dfab799a740f6a0b0 405 SUPERFAMILY SSF103473 12 393 4.97E-61 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS18745 a52be5db32b3361dfab799a740f6a0b0 405 PANTHER PTHR11360 6 394 2.5E-123 T 19-04-2016 ALIDE2_RS18745 a52be5db32b3361dfab799a740f6a0b0 405 Pfam PF07690 Major Facilitator Superfamily 15 327 3.0E-30 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS18745 a52be5db32b3361dfab799a740f6a0b0 405 PANTHER PTHR11360:SF115 6 394 2.5E-123 T 19-04-2016 ALIDE2_RS07495 a2e2a48bad09001a27ce3f3c6ce7c4bb 268 PANTHER PTHR24322:SF57 168 196 9.5E-24 T 19-04-2016 ALIDE2_RS07495 a2e2a48bad09001a27ce3f3c6ce7c4bb 268 PANTHER PTHR24322:SF57 13 149 9.5E-24 T 19-04-2016 ALIDE2_RS07495 a2e2a48bad09001a27ce3f3c6ce7c4bb 268 PANTHER PTHR24322 168 196 9.5E-24 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07495 a2e2a48bad09001a27ce3f3c6ce7c4bb 268 PANTHER PTHR24322 13 149 9.5E-24 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07495 a2e2a48bad09001a27ce3f3c6ce7c4bb 268 Gene3D G3DSA:3.40.50.720 4 267 1.4E-63 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS07495 a2e2a48bad09001a27ce3f3c6ce7c4bb 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 266 1.7E-41 T 19-04-2016 ALIDE2_RS07495 a2e2a48bad09001a27ce3f3c6ce7c4bb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 4.3E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07495 a2e2a48bad09001a27ce3f3c6ce7c4bb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 4.3E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07495 a2e2a48bad09001a27ce3f3c6ce7c4bb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 249 4.3E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07495 a2e2a48bad09001a27ce3f3c6ce7c4bb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 4.3E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07495 a2e2a48bad09001a27ce3f3c6ce7c4bb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.3E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07495 a2e2a48bad09001a27ce3f3c6ce7c4bb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 4.3E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07495 a2e2a48bad09001a27ce3f3c6ce7c4bb 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 207 0.0022 T 19-04-2016 ALIDE2_RS07495 a2e2a48bad09001a27ce3f3c6ce7c4bb 268 SUPERFAMILY SSF51735 8 267 7.18E-62 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS15695 6a65adfb720b94c55bb2a94c14d18b3f 504 SUPERFAMILY SSF54106 417 459 8.11E-5 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS15695 6a65adfb720b94c55bb2a94c14d18b3f 504 PANTHER PTHR21666 69 468 1.6E-108 T 19-04-2016 ALIDE2_RS15695 6a65adfb720b94c55bb2a94c14d18b3f 504 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 132 160 - T 19-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 ALIDE2_RS15695 6a65adfb720b94c55bb2a94c14d18b3f 504 Pfam PF01476 LysM domain 422 450 0.003 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS15695 6a65adfb720b94c55bb2a94c14d18b3f 504 Pfam PF01476 LysM domain 355 386 0.028 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS15695 6a65adfb720b94c55bb2a94c14d18b3f 504 PANTHER PTHR21666:SF206 69 468 1.6E-108 T 19-04-2016 ALIDE2_RS15695 6a65adfb720b94c55bb2a94c14d18b3f 504 Pfam PF01464 Transglycosylase SLT domain 120 222 1.0E-25 T 19-04-2016 IPR008258 Transglycosylase SLT domain 1 ALIDE2_RS15695 6a65adfb720b94c55bb2a94c14d18b3f 504 SUPERFAMILY SSF53955 111 270 2.53E-41 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS15695 6a65adfb720b94c55bb2a94c14d18b3f 504 Gene3D G3DSA:1.10.530.10 107 269 3.0E-45 T 19-04-2016 ALIDE2_RS15695 6a65adfb720b94c55bb2a94c14d18b3f 504 Gene3D G3DSA:3.10.350.10 422 459 6.9E-8 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS15695 6a65adfb720b94c55bb2a94c14d18b3f 504 Gene3D G3DSA:3.10.350.10 350 386 3.3E-4 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS14630 c2d866084235c21baae6899e9e9a091f 332 PANTHER PTHR30160:SF13 1 296 1.6E-61 T 19-04-2016 ALIDE2_RS14630 c2d866084235c21baae6899e9e9a091f 332 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 25 301 4.1E-57 T 19-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 ALIDE2_RS14630 c2d866084235c21baae6899e9e9a091f 332 Gene3D G3DSA:3.40.50.300 51 152 5.0E-6 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14630 c2d866084235c21baae6899e9e9a091f 332 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 19 324 3.7E-95 T 19-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 ALIDE2_RS14630 c2d866084235c21baae6899e9e9a091f 332 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 7 329 35.26 T 19-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 ALIDE2_RS14630 c2d866084235c21baae6899e9e9a091f 332 SUPERFAMILY SSF52540 52 166 1.12E-10 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14630 c2d866084235c21baae6899e9e9a091f 332 PANTHER PTHR30160 1 296 1.6E-61 T 19-04-2016 ALIDE2_RS09345 88bf57b49cc12d923f7d8943a62716da 273 Pfam PF09339 IclR helix-turn-helix domain 22 68 2.5E-12 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS09345 88bf57b49cc12d923f7d8943a62716da 273 SUPERFAMILY SSF46785 19 92 1.31E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS09345 88bf57b49cc12d923f7d8943a62716da 273 Gene3D G3DSA:3.30.450.40 91 264 8.9E-32 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS09345 88bf57b49cc12d923f7d8943a62716da 273 PANTHER PTHR30136 19 262 6.8E-57 T 19-04-2016 ALIDE2_RS09345 88bf57b49cc12d923f7d8943a62716da 273 PANTHER PTHR30136:SF4 19 262 6.8E-57 T 19-04-2016 ALIDE2_RS09345 88bf57b49cc12d923f7d8943a62716da 273 SUPERFAMILY SSF55781 86 264 1.11E-31 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS09345 88bf57b49cc12d923f7d8943a62716da 273 SMART SM00346 19 109 6.4E-18 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS09345 88bf57b49cc12d923f7d8943a62716da 273 Gene3D G3DSA:1.10.10.10 8 79 8.3E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS09345 88bf57b49cc12d923f7d8943a62716da 273 Pfam PF01614 Bacterial transcriptional regulator 140 256 1.1E-6 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS08225 ab353ecbb5cf81c27f2e546104c476c1 551 PANTHER PTHR10422:SF21 72 511 1.8E-38 T 19-04-2016 ALIDE2_RS08225 ab353ecbb5cf81c27f2e546104c476c1 551 Gene3D G3DSA:1.20.210.10 84 522 3.4E-40 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS08225 ab353ecbb5cf81c27f2e546104c476c1 551 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 96 508 2.0E-77 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS08225 ab353ecbb5cf81c27f2e546104c476c1 551 PANTHER PTHR10422 72 511 1.8E-38 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS08225 ab353ecbb5cf81c27f2e546104c476c1 551 SUPERFAMILY SSF81442 92 530 5.49E-87 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS17615 abf2741f4c4fba94217cfb6a70cb05e4 324 SUPERFAMILY SSF52540 7 255 1.52E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17615 abf2741f4c4fba94217cfb6a70cb05e4 324 Pfam PF00005 ABC transporter 27 184 8.6E-27 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS17615 abf2741f4c4fba94217cfb6a70cb05e4 324 PANTHER PTHR24220 8 318 1.1E-137 T 19-04-2016 ALIDE2_RS17615 abf2741f4c4fba94217cfb6a70cb05e4 324 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS17615 abf2741f4c4fba94217cfb6a70cb05e4 324 SMART SM00382 35 242 5.8E-13 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS17615 abf2741f4c4fba94217cfb6a70cb05e4 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 1.2E-19 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS17615 abf2741f4c4fba94217cfb6a70cb05e4 324 PANTHER PTHR24220:SF535 8 318 1.1E-137 T 19-04-2016 ALIDE2_RS17615 abf2741f4c4fba94217cfb6a70cb05e4 324 Gene3D G3DSA:3.40.50.300 6 257 5.8E-73 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17615 abf2741f4c4fba94217cfb6a70cb05e4 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 318 8.4E-25 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS05695 c9588b19ac396727beaa3e053fa3d225 170 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 85 164 8.0E-33 T 19-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 ALIDE2_RS05695 c9588b19ac396727beaa3e053fa3d225 170 PANTHER PTHR10815 8 165 5.6E-57 T 19-04-2016 ALIDE2_RS05695 c9588b19ac396727beaa3e053fa3d225 170 SUPERFAMILY SSF46767 84 165 1.44E-29 T 19-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 ALIDE2_RS05695 c9588b19ac396727beaa3e053fa3d225 170 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 82 4.6E-6 T 19-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 ALIDE2_RS05695 c9588b19ac396727beaa3e053fa3d225 170 PANTHER PTHR10815:SF5 8 165 5.6E-57 T 19-04-2016 ALIDE2_RS05695 c9588b19ac396727beaa3e053fa3d225 170 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 86 165 1.6E-29 T 19-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 ALIDE2_RS05695 c9588b19ac396727beaa3e053fa3d225 170 SUPERFAMILY SSF53155 3 89 6.08E-19 T 19-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 ALIDE2_RS05695 c9588b19ac396727beaa3e053fa3d225 170 Gene3D G3DSA:1.10.10.10 84 165 1.2E-31 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05695 c9588b19ac396727beaa3e053fa3d225 170 Gene3D G3DSA:3.30.160.70 5 82 7.9E-5 T 19-04-2016 ALIDE2_RS05695 c9588b19ac396727beaa3e053fa3d225 170 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 135 141 - T 19-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 ALIDE2_RS16910 6c88388f20a4aa946916bd03a2f459a3 404 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 400 1.8E-129 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS16910 6c88388f20a4aa946916bd03a2f459a3 404 Gene3D G3DSA:3.40.640.10 11 260 7.1E-83 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS16910 6c88388f20a4aa946916bd03a2f459a3 404 Gene3D G3DSA:3.90.1150.10 262 402 4.7E-46 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS16910 6c88388f20a4aa946916bd03a2f459a3 404 PIRSF PIRSF001434 3 404 1.6E-123 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS16910 6c88388f20a4aa946916bd03a2f459a3 404 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 13 400 1.6E-162 T 19-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 ALIDE2_RS16910 6c88388f20a4aa946916bd03a2f459a3 404 SUPERFAMILY SSF53383 33 401 1.1E-109 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS16910 6c88388f20a4aa946916bd03a2f459a3 404 PANTHER PTHR11808 6 404 2.2E-174 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS16910 6c88388f20a4aa946916bd03a2f459a3 404 PANTHER PTHR11808:SF36 6 404 2.2E-174 T 19-04-2016 ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 TIGRFAM TIGR02916 PEP_his_kin: putative PEP-CTERM system histidine kinase 12 681 4.3E-239 T 19-04-2016 IPR014265 Signal transduction histidine kinase, PEP-CTERM system, putative ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 628 1.8E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 1.8E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 643 1.8E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 1.8E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 Gene3D G3DSA:3.30.450.40 311 471 5.3E-13 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 SUPERFAMILY SSF47384 471 534 1.12E-5 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 PANTHER PTHR24423 459 690 1.1E-31 T 19-04-2016 ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 PANTHER PTHR24423 7 15 1.1E-31 T 19-04-2016 ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 PANTHER PTHR24423 402 435 1.1E-31 T 19-04-2016 ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 SUPERFAMILY SSF55874 550 682 6.55E-30 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 SUPERFAMILY SSF55781 322 470 9.98E-14 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 578 682 1.1E-16 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 SMART SM00388 475 541 0.0018 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 SMART SM00387 577 684 2.6E-21 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS03585 90da208b4153e8e0f98205dfefd3961a 693 Gene3D G3DSA:3.30.565.10 550 682 9.3E-29 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS21425 39e133d7ec7a7cf5d6e97ab8f921c1f7 165 SUPERFAMILY SSF47741 84 159 1.44E-32 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 ALIDE2_RS21425 39e133d7ec7a7cf5d6e97ab8f921c1f7 165 Gene3D G3DSA:1.10.150.120 80 160 9.4E-36 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 ALIDE2_RS21425 39e133d7ec7a7cf5d6e97ab8f921c1f7 165 SUPERFAMILY SSF54292 6 92 1.97E-24 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS21425 39e133d7ec7a7cf5d6e97ab8f921c1f7 165 PANTHER PTHR11908 7 148 6.8E-47 T 19-04-2016 ALIDE2_RS21425 39e133d7ec7a7cf5d6e97ab8f921c1f7 165 Pfam PF01799 [2Fe-2S] binding domain 78 150 7.2E-30 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 ALIDE2_RS21425 39e133d7ec7a7cf5d6e97ab8f921c1f7 165 Gene3D G3DSA:3.10.20.30 6 79 7.3E-29 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS21425 39e133d7ec7a7cf5d6e97ab8f921c1f7 165 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 64 6.6E-7 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS21425 39e133d7ec7a7cf5d6e97ab8f921c1f7 165 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 44 52 - T 19-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ALIDE2_RS08625 a34c0dd24b629a844b7b5b96d970d239 346 SUPERFAMILY SSF111369 49 128 7.59E-8 T 19-04-2016 ALIDE2_RS08625 a34c0dd24b629a844b7b5b96d970d239 346 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 39 297 6.0E-13 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS08625 a34c0dd24b629a844b7b5b96d970d239 346 PANTHER PTHR32347 41 341 5.6E-62 T 19-04-2016 ALIDE2_RS08625 a34c0dd24b629a844b7b5b96d970d239 346 PANTHER PTHR32347:SF12 41 341 5.6E-62 T 19-04-2016 ALIDE2_RS08625 a34c0dd24b629a844b7b5b96d970d239 346 SUPERFAMILY SSF111369 183 296 1.11E-7 T 19-04-2016 ALIDE2_RS08625 a34c0dd24b629a844b7b5b96d970d239 346 Gene3D G3DSA:2.40.50.100 211 242 5.0E-11 T 19-04-2016 ALIDE2_RS08625 a34c0dd24b629a844b7b5b96d970d239 346 Gene3D G3DSA:2.40.50.100 51 84 5.0E-11 T 19-04-2016 ALIDE2_RS20595 53861aed300b278e33969455d9d18ea7 552 PANTHER PTHR24096 9 522 1.7E-101 T 19-04-2016 ALIDE2_RS20595 53861aed300b278e33969455d9d18ea7 552 Gene3D G3DSA:2.30.38.10 339 418 6.2E-20 T 19-04-2016 ALIDE2_RS20595 53861aed300b278e33969455d9d18ea7 552 Gene3D G3DSA:3.40.50.980 8 179 3.5E-28 T 19-04-2016 ALIDE2_RS20595 53861aed300b278e33969455d9d18ea7 552 Gene3D G3DSA:3.30.300.30 420 523 8.1E-20 T 19-04-2016 ALIDE2_RS20595 53861aed300b278e33969455d9d18ea7 552 ProSitePatterns PS00455 Putative AMP-binding domain signature. 172 183 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS20595 53861aed300b278e33969455d9d18ea7 552 Pfam PF00501 AMP-binding enzyme 39 425 5.6E-73 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS20595 53861aed300b278e33969455d9d18ea7 552 Gene3D G3DSA:3.40.50.980 180 323 4.4E-25 T 19-04-2016 ALIDE2_RS20595 53861aed300b278e33969455d9d18ea7 552 Pfam PF13193 AMP-binding enzyme C-terminal domain 435 519 3.2E-11 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS20595 53861aed300b278e33969455d9d18ea7 552 SUPERFAMILY SSF56801 5 526 3.66E-112 T 19-04-2016 ALIDE2_RS13400 433e393c6ae2a03d1c02968f5f8dd4f8 327 Pfam PF08443 RimK-like ATP-grasp domain 118 309 4.1E-6 T 19-04-2016 IPR013651 ATP-grasp fold, RimK-type ALIDE2_RS13400 433e393c6ae2a03d1c02968f5f8dd4f8 327 PANTHER PTHR21621:SF0 105 319 2.6E-18 T 19-04-2016 ALIDE2_RS13400 433e393c6ae2a03d1c02968f5f8dd4f8 327 Gene3D G3DSA:3.30.470.20 113 307 4.7E-6 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS13400 433e393c6ae2a03d1c02968f5f8dd4f8 327 SUPERFAMILY SSF56059 121 309 7.26E-19 T 19-04-2016 ALIDE2_RS13400 433e393c6ae2a03d1c02968f5f8dd4f8 327 PANTHER PTHR21621 105 319 2.6E-18 T 19-04-2016 ALIDE2_RS20360 2995be97dfa782bca6c29dae186c63f9 249 SMART SM00893 23 211 1.2E-68 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS20360 2995be97dfa782bca6c29dae186c63f9 249 Gene3D G3DSA:3.40.50.620 1 247 5.1E-106 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS20360 2995be97dfa782bca6c29dae186c63f9 249 PIRSF PIRSF000090 1 249 1.8E-87 T 19-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 ALIDE2_RS20360 2995be97dfa782bca6c29dae186c63f9 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 19-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 ALIDE2_RS20360 2995be97dfa782bca6c29dae186c63f9 249 SUPERFAMILY SSF52402 1 242 3.49E-87 T 19-04-2016 ALIDE2_RS20360 2995be97dfa782bca6c29dae186c63f9 249 PANTHER PTHR21294:SF8 1 249 7.5E-159 T 19-04-2016 ALIDE2_RS20360 2995be97dfa782bca6c29dae186c63f9 249 PANTHER PTHR21294 1 249 7.5E-159 T 19-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 ALIDE2_RS20360 2995be97dfa782bca6c29dae186c63f9 249 Pfam PF01012 Electron transfer flavoprotein domain 28 206 6.8E-47 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 PANTHER PTHR10520 5 275 1.6E-140 T 19-04-2016 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 109 136 4.8E-54 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 4.8E-54 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 4.8E-54 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 255 280 4.8E-54 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 87 109 4.8E-54 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 233 255 4.8E-54 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 SUPERFAMILY SSF53328 86 282 2.62E-61 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 PANTHER PTHR10520:SF7 5 275 1.6E-140 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 Gene3D G3DSA:3.40.50.170 86 277 3.5E-56 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 Pfam PF00551 Formyl transferase 86 263 1.4E-39 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 281 47.22 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 Gene3D G3DSA:3.30.70.260 3 81 2.1E-25 T 19-04-2016 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 SUPERFAMILY SSF55021 3 80 2.66E-16 T 19-04-2016 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 PIRSF PIRSF036480 2 282 1.7E-109 T 19-04-2016 ALIDE2_RS02285 40a5305e3da26864622fe408f6598538 282 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 281 2.6E-101 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 ALIDE2_RS17985 254534a188f56f15a2d315b38b3e6fc7 239 Gene3D G3DSA:3.40.50.1000 87 234 2.0E-38 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS17985 254534a188f56f15a2d315b38b3e6fc7 239 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 21 238 4.4E-64 T 19-04-2016 ALIDE2_RS17985 254534a188f56f15a2d315b38b3e6fc7 239 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 25 204 1.2E-31 T 19-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 ALIDE2_RS17985 254534a188f56f15a2d315b38b3e6fc7 239 PANTHER PTHR10000:SF7 24 239 6.5E-71 T 19-04-2016 ALIDE2_RS17985 254534a188f56f15a2d315b38b3e6fc7 239 PANTHER PTHR10000 24 239 6.5E-71 T 19-04-2016 ALIDE2_RS17985 254534a188f56f15a2d315b38b3e6fc7 239 Pfam PF12710 haloacid dehalogenase-like hydrolase 26 203 2.7E-20 T 19-04-2016 ALIDE2_RS17985 254534a188f56f15a2d315b38b3e6fc7 239 Gene3D G3DSA:1.10.150.210 35 86 2.0E-22 T 19-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 ALIDE2_RS17985 254534a188f56f15a2d315b38b3e6fc7 239 SUPERFAMILY SSF56784 19 235 1.29E-48 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS21735 589974649d765b97c19ce2199bed88e6 266 SUPERFAMILY SSF51366 12 265 1.18E-88 T 19-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 ALIDE2_RS21735 589974649d765b97c19ce2199bed88e6 266 PANTHER PTHR22854:SF2 1 266 1.1E-110 T 19-04-2016 ALIDE2_RS21735 589974649d765b97c19ce2199bed88e6 266 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 266 35.616 T 19-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 ALIDE2_RS21735 589974649d765b97c19ce2199bed88e6 266 PANTHER PTHR22854 1 266 1.1E-110 T 19-04-2016 ALIDE2_RS21735 589974649d765b97c19ce2199bed88e6 266 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 263 5.5E-95 T 19-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 ALIDE2_RS21735 589974649d765b97c19ce2199bed88e6 266 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 19-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 ALIDE2_RS21735 589974649d765b97c19ce2199bed88e6 266 Gene3D G3DSA:3.20.20.70 1 265 2.6E-110 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS01305 6340e70312c059d5fb725bb3a914d800 297 SUPERFAMILY SSF103481 42 144 3.66E-7 T 19-04-2016 ALIDE2_RS01305 6340e70312c059d5fb725bb3a914d800 297 SUPERFAMILY SSF103481 189 289 5.89E-12 T 19-04-2016 ALIDE2_RS01305 6340e70312c059d5fb725bb3a914d800 297 Pfam PF00892 EamA-like transporter family 8 136 1.6E-11 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS01305 6340e70312c059d5fb725bb3a914d800 297 Pfam PF00892 EamA-like transporter family 152 285 3.9E-18 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS01305 6340e70312c059d5fb725bb3a914d800 297 PANTHER PTHR22911 5 292 4.3E-32 T 19-04-2016 ALIDE2_RS11150 50cb89f6c33f6d40c32814994704ee7b 293 Pfam PF03466 LysR substrate binding domain 89 291 1.5E-34 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS11150 50cb89f6c33f6d40c32814994704ee7b 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.9E-16 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11150 50cb89f6c33f6d40c32814994704ee7b 293 PANTHER PTHR30419:SF2 1 292 3.0E-112 T 19-04-2016 ALIDE2_RS11150 50cb89f6c33f6d40c32814994704ee7b 293 SUPERFAMILY SSF53850 90 292 1.63E-36 T 19-04-2016 ALIDE2_RS11150 50cb89f6c33f6d40c32814994704ee7b 293 PANTHER PTHR30419 1 292 3.0E-112 T 19-04-2016 ALIDE2_RS11150 50cb89f6c33f6d40c32814994704ee7b 293 Gene3D G3DSA:3.40.190.10 91 177 2.2E-21 T 19-04-2016 ALIDE2_RS11150 50cb89f6c33f6d40c32814994704ee7b 293 Gene3D G3DSA:1.10.10.10 3 86 2.8E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11150 50cb89f6c33f6d40c32814994704ee7b 293 SUPERFAMILY SSF46785 2 112 2.5E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11150 50cb89f6c33f6d40c32814994704ee7b 293 Gene3D G3DSA:3.40.190.10 178 265 5.2E-15 T 19-04-2016 ALIDE2_RS11230 d553e09e889d9b4d1010d42e04b94004 394 PANTHER PTHR11751 12 390 1.3E-132 T 19-04-2016 ALIDE2_RS11230 d553e09e889d9b4d1010d42e04b94004 394 Gene3D G3DSA:3.40.640.10 49 256 1.7E-61 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS11230 d553e09e889d9b4d1010d42e04b94004 394 Pfam PF00155 Aminotransferase class I and II 35 388 3.7E-55 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ALIDE2_RS11230 d553e09e889d9b4d1010d42e04b94004 394 SUPERFAMILY SSF53383 1 392 9.65E-104 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS11230 d553e09e889d9b4d1010d42e04b94004 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 19-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 ALIDE2_RS11230 d553e09e889d9b4d1010d42e04b94004 394 PANTHER PTHR11751:SF401 12 390 1.3E-132 T 19-04-2016 ALIDE2_RS11230 d553e09e889d9b4d1010d42e04b94004 394 Gene3D G3DSA:3.90.1150.10 257 393 1.8E-34 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS14960 0f8dfc617f9516d4180ad66abd306602 212 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 10 209 1.3E-75 T 19-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ALIDE2_RS14960 0f8dfc617f9516d4180ad66abd306602 212 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 19-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 ALIDE2_RS14960 0f8dfc617f9516d4180ad66abd306602 212 SUPERFAMILY SSF51569 4 209 5.49E-69 T 19-04-2016 ALIDE2_RS14960 0f8dfc617f9516d4180ad66abd306602 212 PANTHER PTHR30246 1 210 5.3E-95 T 19-04-2016 ALIDE2_RS14960 0f8dfc617f9516d4180ad66abd306602 212 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 19-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ALIDE2_RS14960 0f8dfc617f9516d4180ad66abd306602 212 Pfam PF01081 KDPG and KHG aldolase 11 203 3.8E-70 T 19-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ALIDE2_RS14960 0f8dfc617f9516d4180ad66abd306602 212 Gene3D G3DSA:3.20.20.70 5 210 6.6E-77 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS14960 0f8dfc617f9516d4180ad66abd306602 212 PANTHER PTHR30246:SF0 1 210 5.3E-95 T 19-04-2016 ALIDE2_RS08455 c6653c7395c254d0a3898231a70538b4 260 SMART SM00382 34 213 9.6E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS08455 c6653c7395c254d0a3898231a70538b4 260 PANTHER PTHR24220:SF589 6 253 1.2E-95 T 19-04-2016 ALIDE2_RS08455 c6653c7395c254d0a3898231a70538b4 260 PANTHER PTHR24220 6 253 1.2E-95 T 19-04-2016 ALIDE2_RS08455 c6653c7395c254d0a3898231a70538b4 260 Gene3D G3DSA:3.40.50.300 3 222 2.9E-65 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08455 c6653c7395c254d0a3898231a70538b4 260 Pfam PF00005 ABC transporter 27 164 5.0E-31 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS08455 c6653c7395c254d0a3898231a70538b4 260 SUPERFAMILY SSF52540 7 237 9.42E-70 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22710 a00202763eccf2da4f03bdbec0d1cf60 214 Gene3D G3DSA:3.30.1330.60 92 208 2.2E-39 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS22710 a00202763eccf2da4f03bdbec0d1cf60 214 Pfam PF13488 Glycine zipper 31 76 7.5E-10 T 19-04-2016 ALIDE2_RS22710 a00202763eccf2da4f03bdbec0d1cf60 214 SUPERFAMILY SSF103088 96 209 7.85E-37 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS22710 a00202763eccf2da4f03bdbec0d1cf60 214 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 192 212 4.4E-7 T 19-04-2016 ALIDE2_RS22710 a00202763eccf2da4f03bdbec0d1cf60 214 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 154 171 4.4E-7 T 19-04-2016 ALIDE2_RS22710 a00202763eccf2da4f03bdbec0d1cf60 214 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 172 191 4.4E-7 T 19-04-2016 ALIDE2_RS22710 a00202763eccf2da4f03bdbec0d1cf60 214 PANTHER PTHR30128 28 213 1.0E-42 T 19-04-2016 ALIDE2_RS22710 a00202763eccf2da4f03bdbec0d1cf60 214 Pfam PF00691 OmpA family 109 203 1.0E-22 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS22710 a00202763eccf2da4f03bdbec0d1cf60 214 PRINTS PR01021 OMPA domain signature 109 131 9.9E-10 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ALIDE2_RS22710 a00202763eccf2da4f03bdbec0d1cf60 214 PRINTS PR01021 OMPA domain signature 154 170 9.9E-10 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ALIDE2_RS22710 a00202763eccf2da4f03bdbec0d1cf60 214 PRINTS PR01021 OMPA domain signature 139 154 9.9E-10 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 Gene3D G3DSA:1.25.40.10 208 300 7.0E-28 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 19-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 Pfam PF14561 Tetratricopeptide repeat 208 299 7.8E-18 T 19-04-2016 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 PANTHER PTHR10438:SF281 126 148 6.6E-40 T 19-04-2016 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 PANTHER PTHR10438:SF281 1 108 6.6E-40 T 19-04-2016 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 Pfam PF00085 Thioredoxin 4 105 7.5E-28 T 19-04-2016 IPR013766 Thioredoxin domain GO:0045454 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 Gene3D G3DSA:1.25.40.10 113 188 4.1E-7 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 SUPERFAMILY SSF48452 123 171 4.98E-9 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 SUPERFAMILY SSF48452 201 251 4.98E-9 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 SUPERFAMILY SSF52833 2 110 5.85E-35 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 Gene3D G3DSA:3.40.30.10 1 107 9.3E-34 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 PRINTS PR00421 Thioredoxin family signature 70 81 2.8E-6 T 19-04-2016 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 PRINTS PR00421 Thioredoxin family signature 22 30 2.8E-6 T 19-04-2016 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 PRINTS PR00421 Thioredoxin family signature 30 39 2.8E-6 T 19-04-2016 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 PANTHER PTHR10438 126 148 6.6E-40 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 PANTHER PTHR10438 1 108 6.6E-40 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 Pfam PF14559 Tetratricopeptide repeat 124 189 7.7E-10 T 19-04-2016 ALIDE2_RS22220 1cbb13991bee374c12523a831be7bfc8 302 TIGRFAM TIGR01068 thioredoxin: thioredoxin 15 105 2.3E-31 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ALIDE2_RS06005 b8ca54df97031cdb006260400f6d01c0 352 Pfam PF02277 Phosphoribosyltransferase 12 346 2.5E-122 T 19-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 ALIDE2_RS06005 b8ca54df97031cdb006260400f6d01c0 352 Gene3D G3DSA:3.40.50.10210 70 329 2.0E-98 T 19-04-2016 ALIDE2_RS06005 b8ca54df97031cdb006260400f6d01c0 352 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 10 348 34.221 T 19-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 ALIDE2_RS06005 b8ca54df97031cdb006260400f6d01c0 352 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 12 346 3.5E-125 T 19-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 ALIDE2_RS06005 b8ca54df97031cdb006260400f6d01c0 352 SUPERFAMILY SSF52733 11 346 1.96E-106 T 19-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 ALIDE2_RS06005 b8ca54df97031cdb006260400f6d01c0 352 PANTHER PTHR21712:SF4 1 346 2.3E-102 T 19-04-2016 ALIDE2_RS06005 b8ca54df97031cdb006260400f6d01c0 352 PANTHER PTHR21712 1 346 2.3E-102 T 19-04-2016 ALIDE2_RS06005 b8ca54df97031cdb006260400f6d01c0 352 Gene3D G3DSA:1.10.1610.10 2 69 6.0E-29 T 19-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 PANTHER PTHR22888:SF2 37 311 1.9E-96 T 19-04-2016 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 PANTHER PTHR22888 37 311 1.9E-96 T 19-04-2016 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 292 363 1.9E-12 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 Gene3D G3DSA:2.60.40.420 122 299 1.2E-56 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 SUPERFAMILY SSF46626 273 377 5.3E-22 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 SUPERFAMILY SSF49503 180 315 3.79E-51 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 SUPERFAMILY SSF49503 124 150 3.79E-51 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 Gene3D G3DSA:1.10.287.90 36 121 2.0E-25 T 19-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 36 118 3.5E-14 T 19-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 Gene3D G3DSA:1.10.760.10 300 374 1.5E-22 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 SUPERFAMILY SSF81464 31 122 3.43E-27 T 19-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 222 239 1.7E-38 T 19-04-2016 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 93 105 1.7E-38 T 19-04-2016 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 178 199 1.7E-38 T 19-04-2016 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 240 257 1.7E-38 T 19-04-2016 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 127 146 1.7E-38 T 19-04-2016 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 105 125 1.7E-38 T 19-04-2016 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 202 222 1.7E-38 T 19-04-2016 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 203 251 - T 19-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 44 267 2.3E-59 T 19-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 ALIDE2_RS19595 66398dbe18c7c38255e9e348f9913fad 387 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 131 256 1.8E-37 T 19-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 ALIDE2_RS07690 3d82b3f68cd6b546eb4e1adbfceddd41 492 Pfam PF00171 Aldehyde dehydrogenase family 22 486 3.3E-163 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS07690 3d82b3f68cd6b546eb4e1adbfceddd41 492 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 288 299 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS07690 3d82b3f68cd6b546eb4e1adbfceddd41 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 260 267 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS07690 3d82b3f68cd6b546eb4e1adbfceddd41 492 Gene3D G3DSA:3.40.309.10 275 452 3.4E-70 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS07690 3d82b3f68cd6b546eb4e1adbfceddd41 492 PANTHER PTHR11699 15 491 4.0E-213 T 19-04-2016 ALIDE2_RS07690 3d82b3f68cd6b546eb4e1adbfceddd41 492 SUPERFAMILY SSF53720 12 490 3.4E-161 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS07690 3d82b3f68cd6b546eb4e1adbfceddd41 492 Gene3D G3DSA:3.40.605.10 14 274 1.1E-86 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS07320 069f6fc5d4f108231fe1b35af8e4db5b 421 SMART SM00994 12 51 3.2E-24 T 19-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 ALIDE2_RS07320 069f6fc5d4f108231fe1b35af8e4db5b 421 SUPERFAMILY SSF52540 64 405 2.7E-75 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07320 069f6fc5d4f108231fe1b35af8e4db5b 421 Gene3D G3DSA:3.40.50.300 295 312 2.5E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07320 069f6fc5d4f108231fe1b35af8e4db5b 421 Gene3D G3DSA:3.40.50.300 66 256 2.5E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07320 069f6fc5d4f108231fe1b35af8e4db5b 421 Gene3D G3DSA:1.10.8.60 317 417 6.2E-35 T 19-04-2016 ALIDE2_RS07320 069f6fc5d4f108231fe1b35af8e4db5b 421 PANTHER PTHR11262:SF4 3 416 1.6E-242 T 19-04-2016 ALIDE2_RS07320 069f6fc5d4f108231fe1b35af8e4db5b 421 SUPERFAMILY SSF57716 13 48 9.55E-12 T 19-04-2016 ALIDE2_RS07320 069f6fc5d4f108231fe1b35af8e4db5b 421 Pfam PF07724 AAA domain (Cdc48 subfamily) 115 311 1.4E-48 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS07320 069f6fc5d4f108231fe1b35af8e4db5b 421 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 416 52.937 T 19-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 ALIDE2_RS07320 069f6fc5d4f108231fe1b35af8e4db5b 421 PANTHER PTHR11262 3 416 1.6E-242 T 19-04-2016 ALIDE2_RS07320 069f6fc5d4f108231fe1b35af8e4db5b 421 SMART SM00382 114 267 3.2E-12 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS07320 069f6fc5d4f108231fe1b35af8e4db5b 421 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 412 7.6E-202 T 19-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 ALIDE2_RS07320 069f6fc5d4f108231fe1b35af8e4db5b 421 SMART SM01086 318 413 4.1E-31 T 19-04-2016 IPR019489 Clp ATPase, C-terminal ALIDE2_RS07320 069f6fc5d4f108231fe1b35af8e4db5b 421 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 318 391 2.1E-14 T 19-04-2016 IPR019489 Clp ATPase, C-terminal ALIDE2_RS07320 069f6fc5d4f108231fe1b35af8e4db5b 421 Pfam PF06689 ClpX C4-type zinc finger 13 49 3.4E-20 T 19-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 Gene3D G3DSA:1.10.240.10 243 339 1.6E-31 T 19-04-2016 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 PANTHER PTHR11766:SF1 15 409 1.5E-213 T 19-04-2016 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 13 409 46.277 T 19-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 Pfam PF01479 S4 domain 354 393 2.6E-9 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 193 215 4.1E-25 T 19-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 61 83 4.1E-25 T 19-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 226 238 4.1E-25 T 19-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 176 191 4.1E-25 T 19-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 67 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 21 408 2.2E-114 T 19-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 SUPERFAMILY SSF55174 331 406 5.63E-18 T 19-04-2016 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 Gene3D G3DSA:3.40.50.620 22 242 2.3E-78 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 SMART SM00363 349 410 6.4E-6 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 SUPERFAMILY SSF52374 20 327 2.09E-86 T 19-04-2016 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 Pfam PF00579 tRNA synthetases class I (W and Y) 47 329 4.2E-74 T 19-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 PANTHER PTHR11766 15 409 1.5E-213 T 19-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 ALIDE2_RS03325 3d1bb57773f24c868caee6c1d8a6d1fc 410 Gene3D G3DSA:3.10.290.10 340 408 8.6E-23 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS04695 05ffb9e02bfb7208247c8858be55da13 320 PANTHER PTHR30465:SF59 1 317 7.3E-152 T 19-04-2016 ALIDE2_RS04695 05ffb9e02bfb7208247c8858be55da13 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 316 5.3E-40 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS04695 05ffb9e02bfb7208247c8858be55da13 320 SUPERFAMILY SSF161098 90 302 6.87E-20 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS04695 05ffb9e02bfb7208247c8858be55da13 320 PANTHER PTHR30465 1 317 7.3E-152 T 19-04-2016 ALIDE2_RS04695 05ffb9e02bfb7208247c8858be55da13 320 Gene3D G3DSA:1.10.3720.10 90 313 9.0E-22 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 Pfam PF01751 Toprim domain 428 542 1.6E-11 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 39 181 4.2E-18 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 SMART SM00433 39 652 4.9E-177 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 Gene3D G3DSA:3.40.50.670 413 637 6.6E-73 T 19-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 Gene3D G3DSA:3.30.230.10 228 402 2.5E-36 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 584 648 2.6E-22 T 19-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR00418 DNA topoisomerase II family signature 498 514 2.4E-60 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR00418 DNA topoisomerase II family signature 72 85 2.4E-60 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR00418 DNA topoisomerase II family signature 588 604 2.4E-60 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR00418 DNA topoisomerase II family signature 37 52 2.4E-60 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR00418 DNA topoisomerase II family signature 281 294 2.4E-60 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR00418 DNA topoisomerase II family signature 118 132 2.4E-60 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR00418 DNA topoisomerase II family signature 536 548 2.4E-60 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR00418 DNA topoisomerase II family signature 429 443 2.4E-60 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR00418 DNA topoisomerase II family signature 516 533 2.4E-60 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 SUPERFAMILY SSF54211 228 402 4.36E-35 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 SUPERFAMILY SSF55874 11 225 8.64E-58 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PANTHER PTHR10169 9 658 0.0 T 19-04-2016 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 Pfam PF00204 DNA gyrase B 229 400 4.4E-33 T 19-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PANTHER PTHR10169:SF45 9 658 0.0 T 19-04-2016 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR01098 Topoisomerase IV subunit B signature 144 158 5.0E-40 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR01098 Topoisomerase IV subunit B signature 377 402 5.0E-40 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR01098 Topoisomerase IV subunit B signature 326 341 5.0E-40 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR01098 Topoisomerase IV subunit B signature 184 201 5.0E-40 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR01098 Topoisomerase IV subunit B signature 353 376 5.0E-40 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR01098 Topoisomerase IV subunit B signature 463 484 5.0E-40 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR01098 Topoisomerase IV subunit B signature 309 325 5.0E-40 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR01098 Topoisomerase IV subunit B signature 32 45 5.0E-40 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 PRINTS PR01098 Topoisomerase IV subunit B signature 202 223 5.0E-40 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 SUPERFAMILY SSF56719 403 649 7.32E-71 T 19-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 Gene3D G3DSA:3.30.565.10 21 225 2.7E-68 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 8 656 43.433 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 ProSitePatterns PS00177 DNA topoisomerase II signature. 431 439 - T 19-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS18740 51f69dacb71c891500e15984d93ce86a 658 SMART SM00387 33 183 1.1E-16 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS12235 df32b893009b2c05f5d66239ff1b97e3 569 PANTHER PTHR36837 80 568 6.0E-190 T 19-04-2016 ALIDE2_RS12235 df32b893009b2c05f5d66239ff1b97e3 569 SUPERFAMILY SSF53474 219 503 1.13E-42 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS12235 df32b893009b2c05f5d66239ff1b97e3 569 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 49 567 1.7E-215 T 19-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 ALIDE2_RS12235 df32b893009b2c05f5d66239ff1b97e3 569 Gene3D G3DSA:3.40.50.1820 176 535 3.3E-38 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS12235 df32b893009b2c05f5d66239ff1b97e3 569 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 81 246 1.8E-66 T 19-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- ALIDE2_RS12235 df32b893009b2c05f5d66239ff1b97e3 569 PANTHER PTHR36837:SF2 80 568 6.0E-190 T 19-04-2016 ALIDE2_RS16150 f68bc2581721854655cfd9c522cdd5d4 92 PANTHER PTHR12735:SF3 11 92 3.5E-20 T 19-04-2016 ALIDE2_RS16150 f68bc2581721854655cfd9c522cdd5d4 92 PANTHER PTHR12735 11 92 3.5E-20 T 19-04-2016 ALIDE2_RS16150 f68bc2581721854655cfd9c522cdd5d4 92 SUPERFAMILY SSF82657 6 91 5.36E-22 T 19-04-2016 IPR002634 BolA protein ALIDE2_RS16150 f68bc2581721854655cfd9c522cdd5d4 92 PIRSF PIRSF003113 1 92 7.4E-23 T 19-04-2016 IPR002634 BolA protein ALIDE2_RS16150 f68bc2581721854655cfd9c522cdd5d4 92 Gene3D G3DSA:3.30.70.1500 9 91 7.2E-25 T 19-04-2016 ALIDE2_RS16150 f68bc2581721854655cfd9c522cdd5d4 92 Pfam PF01722 BolA-like protein 18 91 3.1E-23 T 19-04-2016 IPR002634 BolA protein ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 Gene3D G3DSA:3.40.50.1480 8 150 3.3E-120 T 19-04-2016 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 Gene3D G3DSA:3.40.50.1480 186 273 3.3E-120 T 19-04-2016 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 468 47.851 T 19-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 Gene3D G3DSA:3.40.50.1480 396 476 1.5E-33 T 19-04-2016 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 235 395 2.5E-83 T 19-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 257 273 - T 19-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 SMART SM00997 235 395 5.0E-117 T 19-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 11 475 7.6E-143 T 19-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 PANTHER PTHR23420 185 476 0.0 T 19-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 PANTHER PTHR23420 6 149 0.0 T 19-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 19-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 SUPERFAMILY SSF51735 235 395 2.38E-79 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 SMART SM00996 10 475 0.0 T 19-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 Gene3D G3DSA:3.40.50.720 274 357 2.0E-14 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 468 3.5E-185 T 19-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 PIRSF PIRSF001109 2 476 2.8E-188 T 19-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 SUPERFAMILY SSF52283 396 476 6.23E-110 T 19-04-2016 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 SUPERFAMILY SSF52283 9 151 6.23E-110 T 19-04-2016 ALIDE2_RS03270 4258c06f62b939675012361eda9bebee 476 SUPERFAMILY SSF52283 187 234 6.23E-110 T 19-04-2016 ALIDE2_RS15880 2fd7080e288db91946897b997dab61ca 286 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 126 1.5E-23 T 19-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ALIDE2_RS15880 2fd7080e288db91946897b997dab61ca 286 Gene3D G3DSA:3.40.630.30 157 283 2.1E-33 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS15880 2fd7080e288db91946897b997dab61ca 286 Pfam PF13673 Acetyltransferase (GNAT) domain 164 284 8.5E-17 T 19-04-2016 IPR000182 GNAT domain GO:0008080 ALIDE2_RS15880 2fd7080e288db91946897b997dab61ca 286 SUPERFAMILY SSF54637 2 137 1.67E-35 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS15880 2fd7080e288db91946897b997dab61ca 286 PANTHER PTHR13355:SF8 156 285 2.6E-32 T 19-04-2016 ALIDE2_RS15880 2fd7080e288db91946897b997dab61ca 286 Pfam PF03061 Thioesterase superfamily 23 107 1.1E-12 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS15880 2fd7080e288db91946897b997dab61ca 286 Gene3D G3DSA:3.10.129.10 2 138 4.7E-38 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS15880 2fd7080e288db91946897b997dab61ca 286 PANTHER PTHR13355 156 285 2.6E-32 T 19-04-2016 ALIDE2_RS15880 2fd7080e288db91946897b997dab61ca 286 SUPERFAMILY SSF55729 144 285 1.95E-33 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 Pfam PF00563 EAL domain 849 1082 1.4E-73 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 SMART SM00052 841 1087 7.6E-108 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 SMART SM00086 618 660 4.9E-8 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 SUPERFAMILY SSF55073 676 833 5.1E-42 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 547 666 1.4E-22 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 Gene3D G3DSA:3.30.450.20 559 658 1.0E-25 T 19-04-2016 ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 SUPERFAMILY SSF55785 269 389 4.03E-12 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 PANTHER PTHR33121 828 1098 2.2E-87 T 19-04-2016 ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 SUPERFAMILY SSF55785 552 658 1.5E-28 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 SMART SM00091 278 344 1.4 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 SMART SM00091 546 612 3.4E-4 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 Pfam PF13426 PAS domain 559 658 8.2E-15 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 SUPERFAMILY SSF141868 849 1094 5.75E-88 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 Gene3D G3DSA:3.30.70.270 673 839 9.0E-49 T 19-04-2016 ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 Pfam PF08448 PAS fold 284 391 6.4E-10 T 19-04-2016 IPR013656 PAS fold-4 ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 Pfam PF17159 Membrane-associated sensor domain 40 269 3.0E-66 T 19-04-2016 IPR033425 Membrane-associated sensor domain MASE3 ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 Gene3D G3DSA:3.30.450.20 270 389 5.4E-12 T 19-04-2016 ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 668 829 2.9E-35 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 PANTHER PTHR33121:SF13 828 1098 2.2E-87 T 19-04-2016 ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 SMART SM00267 660 831 4.8E-49 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 Gene3D G3DSA:3.20.20.450 844 1092 3.4E-97 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS00590 e891ae660f13d749eaa25044b4388384 1100 Pfam PF00990 Diguanylate cyclase, GGDEF domain 672 826 6.4E-41 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS04590 0557576b3de880f4b692a3218d6ee71d 483 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 410 430 - T 19-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS04590 0557576b3de880f4b692a3218d6ee71d 483 Pfam PF00474 Sodium:solute symporter family 30 428 3.7E-43 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS04590 0557576b3de880f4b692a3218d6ee71d 483 PANTHER PTHR11819 3 464 2.4E-101 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS04590 0557576b3de880f4b692a3218d6ee71d 483 PANTHER PTHR11819:SF141 3 464 2.4E-101 T 19-04-2016 ALIDE2_RS23285 97bca4d4fdfb4799a2d0a3c8314c8806 401 SUPERFAMILY SSF53822 33 400 3.03E-75 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS23285 97bca4d4fdfb4799a2d0a3c8314c8806 401 Pfam PF13458 Periplasmic binding protein 33 369 1.7E-68 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS23285 97bca4d4fdfb4799a2d0a3c8314c8806 401 Gene3D G3DSA:3.40.50.2300 308 360 1.0E-32 T 19-04-2016 ALIDE2_RS23285 97bca4d4fdfb4799a2d0a3c8314c8806 401 Gene3D G3DSA:3.40.50.2300 27 153 1.0E-32 T 19-04-2016 ALIDE2_RS23285 97bca4d4fdfb4799a2d0a3c8314c8806 401 PANTHER PTHR30483 1 367 1.7E-53 T 19-04-2016 ALIDE2_RS23285 97bca4d4fdfb4799a2d0a3c8314c8806 401 Gene3D G3DSA:3.40.50.2300 165 307 4.7E-20 T 19-04-2016 ALIDE2_RS05685 c92fb0b3d2f701beb71cb28c94be5660 258 Gene3D G3DSA:3.40.50.300 8 239 2.5E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05685 c92fb0b3d2f701beb71cb28c94be5660 258 SMART SM00382 30 249 3.1E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS05685 c92fb0b3d2f701beb71cb28c94be5660 258 Pfam PF00005 ABC transporter 21 171 2.6E-26 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS05685 c92fb0b3d2f701beb71cb28c94be5660 258 SUPERFAMILY SSF52540 4 231 3.31E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05685 c92fb0b3d2f701beb71cb28c94be5660 258 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS05685 c92fb0b3d2f701beb71cb28c94be5660 258 PANTHER PTHR24220 7 240 3.8E-60 T 19-04-2016 ALIDE2_RS18805 6988bade0caef9ac3214968441b07711 285 PANTHER PTHR21057:SF2 5 284 5.4E-164 T 19-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 ALIDE2_RS18805 6988bade0caef9ac3214968441b07711 285 SUPERFAMILY SSF51569 2 275 2.11E-101 T 19-04-2016 ALIDE2_RS18805 6988bade0caef9ac3214968441b07711 285 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 276 53.064 T 19-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 ALIDE2_RS18805 6988bade0caef9ac3214968441b07711 285 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 275 1.5E-123 T 19-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 ALIDE2_RS18805 6988bade0caef9ac3214968441b07711 285 Pfam PF00793 DAHP synthetase I family 7 272 3.3E-67 T 19-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 ALIDE2_RS18805 6988bade0caef9ac3214968441b07711 285 Gene3D G3DSA:3.20.20.70 12 276 2.4E-115 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS18805 6988bade0caef9ac3214968441b07711 285 PANTHER PTHR21057 5 284 5.4E-164 T 19-04-2016 ALIDE2_RS00750 a73c5982995a00b3b2df60af68160aa4 393 Gene3D G3DSA:3.30.1540.10 220 304 1.3E-25 T 19-04-2016 ALIDE2_RS00750 a73c5982995a00b3b2df60af68160aa4 393 Gene3D G3DSA:3.40.50.10540 305 390 3.3E-100 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00750 a73c5982995a00b3b2df60af68160aa4 393 Gene3D G3DSA:3.40.50.10540 2 214 3.3E-100 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00750 a73c5982995a00b3b2df60af68160aa4 393 SUPERFAMILY SSF89796 3 390 5.1E-126 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00750 a73c5982995a00b3b2df60af68160aa4 393 PANTHER PTHR24023 242 380 5.3E-30 T 19-04-2016 ALIDE2_RS00750 a73c5982995a00b3b2df60af68160aa4 393 PANTHER PTHR24023 42 215 5.3E-30 T 19-04-2016 ALIDE2_RS00750 a73c5982995a00b3b2df60af68160aa4 393 Pfam PF02515 CoA-transferase family III 5 370 1.2E-112 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS00750 a73c5982995a00b3b2df60af68160aa4 393 PANTHER PTHR24023:SF593 242 380 5.3E-30 T 19-04-2016 ALIDE2_RS00750 a73c5982995a00b3b2df60af68160aa4 393 PANTHER PTHR24023:SF593 42 215 5.3E-30 T 19-04-2016 ALIDE2_RS08940 d87df345c9f4b80e0fe1c4d801ac4d13 732 PRINTS PR00723 Subtilisin serine protease family (S8) signature 200 219 8.5E-5 T 19-04-2016 IPR015500 Peptidase S8, subtilisin-related ALIDE2_RS08940 d87df345c9f4b80e0fe1c4d801ac4d13 732 PRINTS PR00723 Subtilisin serine protease family (S8) signature 474 490 8.5E-5 T 19-04-2016 IPR015500 Peptidase S8, subtilisin-related ALIDE2_RS08940 d87df345c9f4b80e0fe1c4d801ac4d13 732 PRINTS PR00723 Subtilisin serine protease family (S8) signature 240 253 8.5E-5 T 19-04-2016 IPR015500 Peptidase S8, subtilisin-related ALIDE2_RS08940 d87df345c9f4b80e0fe1c4d801ac4d13 732 Gene3D G3DSA:3.40.50.200 205 542 7.3E-32 T 19-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ALIDE2_RS08940 d87df345c9f4b80e0fe1c4d801ac4d13 732 Pfam PF00082 Subtilase family 203 523 8.5E-27 T 19-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ALIDE2_RS08940 d87df345c9f4b80e0fe1c4d801ac4d13 732 SUPERFAMILY SSF52743 186 552 1.09E-40 T 19-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 PANTHER PTHR24322 11 137 1.6E-59 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 PANTHER PTHR24322 153 185 1.6E-59 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 Gene3D G3DSA:3.40.50.720 5 245 6.6E-86 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 1.2E-67 T 19-04-2016 ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 SUPERFAMILY SSF51735 7 245 2.46E-82 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 244 1.0E-97 T 19-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 PANTHER PTHR24322:SF635 11 137 1.6E-59 T 19-04-2016 ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 PANTHER PTHR24322:SF635 153 185 1.6E-59 T 19-04-2016 ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.9E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.9E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.9E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.4E-45 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.4E-45 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.4E-45 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.4E-45 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.4E-45 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.4E-45 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS06300 dc1eaea8b00a0f4d34e5a7cfd51c7737 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 189 1.0E-4 T 19-04-2016 ALIDE2_RS14170 4fff172109719b8496cac71fed1ce0ae 150 SUPERFAMILY SSF54593 1 145 1.5E-33 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS14170 4fff172109719b8496cac71fed1ce0ae 150 Gene3D G3DSA:3.10.180.10 7 148 1.6E-43 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS14170 4fff172109719b8496cac71fed1ce0ae 150 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 2 144 1.6E-7 T 19-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase ALIDE2_RS14170 4fff172109719b8496cac71fed1ce0ae 150 PANTHER PTHR33990 1 146 1.4E-42 T 19-04-2016 ALIDE2_RS14170 4fff172109719b8496cac71fed1ce0ae 150 PANTHER PTHR33990:SF1 1 146 1.4E-42 T 19-04-2016 ALIDE2_RS05485 136b4b770a6b04d4e9e284e48f9528e5 293 PANTHER PTHR30007:SF4 8 255 3.0E-62 T 19-04-2016 ALIDE2_RS05485 136b4b770a6b04d4e9e284e48f9528e5 293 PANTHER PTHR30007 8 255 3.0E-62 T 19-04-2016 ALIDE2_RS05485 136b4b770a6b04d4e9e284e48f9528e5 293 SMART SM00481 7 72 4.3E-11 T 19-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 ALIDE2_RS05485 136b4b770a6b04d4e9e284e48f9528e5 293 SUPERFAMILY SSF89550 168 279 4.12E-46 T 19-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 ALIDE2_RS05485 136b4b770a6b04d4e9e284e48f9528e5 293 SUPERFAMILY SSF89550 5 85 4.12E-46 T 19-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 ALIDE2_RS05485 136b4b770a6b04d4e9e284e48f9528e5 293 Pfam PF02811 PHP domain 8 121 1.8E-8 T 19-04-2016 IPR004013 PHP domain GO:0003824 ALIDE2_RS05485 136b4b770a6b04d4e9e284e48f9528e5 293 Gene3D G3DSA:3.20.20.140 160 263 8.1E-37 T 19-04-2016 ALIDE2_RS05485 136b4b770a6b04d4e9e284e48f9528e5 293 Gene3D G3DSA:3.20.20.140 6 90 8.1E-37 T 19-04-2016 ALIDE2_RS14560 78296d1507282a8374d94c5c67f8ae24 492 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 25 434 9.0E-102 T 19-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 ALIDE2_RS14560 78296d1507282a8374d94c5c67f8ae24 492 TIGRFAM TIGR03173 pbuX: xanthine permease 28 436 3.8E-151 T 19-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 ALIDE2_RS14560 78296d1507282a8374d94c5c67f8ae24 492 PANTHER PTHR11119:SF3 17 437 5.2E-109 T 19-04-2016 ALIDE2_RS14560 78296d1507282a8374d94c5c67f8ae24 492 PANTHER PTHR11119 17 437 5.2E-109 T 19-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS14560 78296d1507282a8374d94c5c67f8ae24 492 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 351 371 - T 19-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 ALIDE2_RS14560 78296d1507282a8374d94c5c67f8ae24 492 Pfam PF00860 Permease family 26 403 1.4E-87 T 19-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS05820 3b3c4a4232875210ed2f3a2ee802851a 325 PANTHER PTHR30349:SF1 25 294 7.5E-34 T 19-04-2016 ALIDE2_RS05820 3b3c4a4232875210ed2f3a2ee802851a 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 304 3.7E-35 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS05820 3b3c4a4232875210ed2f3a2ee802851a 325 PANTHER PTHR30349 25 294 7.5E-34 T 19-04-2016 ALIDE2_RS05820 3b3c4a4232875210ed2f3a2ee802851a 325 SUPERFAMILY SSF53850 46 281 2.72E-10 T 19-04-2016 ALIDE2_RS01060 bba9d8e908a0be60ec8e7221f4b61ac2 511 Pfam PF01078 Magnesium chelatase, subunit ChlI 200 404 8.1E-93 T 19-04-2016 IPR000523 Magnesium chelatase ChlI domain ALIDE2_RS01060 bba9d8e908a0be60ec8e7221f4b61ac2 511 PANTHER PTHR32039:SF7 1 507 5.9E-222 T 19-04-2016 IPR004482 Mg chelatase-related protein ALIDE2_RS01060 bba9d8e908a0be60ec8e7221f4b61ac2 511 Gene3D G3DSA:3.40.50.300 199 398 2.0E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01060 bba9d8e908a0be60ec8e7221f4b61ac2 511 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 134 4.6E-39 T 19-04-2016 ALIDE2_RS01060 bba9d8e908a0be60ec8e7221f4b61ac2 511 Gene3D G3DSA:3.30.230.10 6 170 2.2E-23 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALIDE2_RS01060 bba9d8e908a0be60ec8e7221f4b61ac2 511 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 411 503 1.1E-27 T 19-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain ALIDE2_RS01060 bba9d8e908a0be60ec8e7221f4b61ac2 511 PANTHER PTHR32039 1 507 5.9E-222 T 19-04-2016 ALIDE2_RS01060 bba9d8e908a0be60ec8e7221f4b61ac2 511 SUPERFAMILY SSF52540 200 504 1.98E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01060 bba9d8e908a0be60ec8e7221f4b61ac2 511 SUPERFAMILY SSF54211 10 171 1.67E-25 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS01060 bba9d8e908a0be60ec8e7221f4b61ac2 511 SMART SM00382 220 401 1.1E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS01060 bba9d8e908a0be60ec8e7221f4b61ac2 511 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 503 1.6E-173 T 19-04-2016 IPR004482 Mg chelatase-related protein ALIDE2_RS12120 3776d79fe6f4e0e13c1d46565fd7962d 313 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 18 312 1.1E-83 T 19-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 ALIDE2_RS12120 3776d79fe6f4e0e13c1d46565fd7962d 313 PANTHER PTHR11061 1 313 1.4E-76 T 19-04-2016 ALIDE2_RS12120 3776d79fe6f4e0e13c1d46565fd7962d 313 SUPERFAMILY SSF53335 29 276 1.38E-49 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS12120 3776d79fe6f4e0e13c1d46565fd7962d 313 Gene3D G3DSA:3.40.50.150 36 312 5.3E-53 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS12120 3776d79fe6f4e0e13c1d46565fd7962d 313 PANTHER PTHR11061:SF34 1 313 1.4E-76 T 19-04-2016 ALIDE2_RS02310 2cdcf5fa348e27f8d633bfa59dc38d1c 224 SUPERFAMILY SSF52172 5 136 1.57E-31 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS02310 2cdcf5fa348e27f8d633bfa59dc38d1c 224 PANTHER PTHR26402 6 217 8.5E-68 T 19-04-2016 ALIDE2_RS02310 2cdcf5fa348e27f8d633bfa59dc38d1c 224 Pfam PF00072 Response regulator receiver domain 9 120 6.3E-23 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS02310 2cdcf5fa348e27f8d633bfa59dc38d1c 224 SUPERFAMILY SSF46894 153 220 4.42E-22 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS02310 2cdcf5fa348e27f8d633bfa59dc38d1c 224 Gene3D G3DSA:1.10.10.10 125 220 6.1E-32 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02310 2cdcf5fa348e27f8d633bfa59dc38d1c 224 ProSitePatterns PS00622 LuxR-type HTH domain signature. 177 204 - T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS02310 2cdcf5fa348e27f8d633bfa59dc38d1c 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 193 8.7E-15 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS02310 2cdcf5fa348e27f8d633bfa59dc38d1c 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 205 8.7E-15 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS02310 2cdcf5fa348e27f8d633bfa59dc38d1c 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 177 8.7E-15 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS02310 2cdcf5fa348e27f8d633bfa59dc38d1c 224 SMART SM00448 6 119 8.5E-27 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS02310 2cdcf5fa348e27f8d633bfa59dc38d1c 224 PANTHER PTHR26402:SF458 6 217 8.5E-68 T 19-04-2016 ALIDE2_RS02310 2cdcf5fa348e27f8d633bfa59dc38d1c 224 SMART SM00421 160 217 3.4E-27 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS02310 2cdcf5fa348e27f8d633bfa59dc38d1c 224 Gene3D G3DSA:3.40.50.2300 5 124 1.3E-33 T 19-04-2016 ALIDE2_RS02310 2cdcf5fa348e27f8d633bfa59dc38d1c 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 162 217 4.9E-23 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS23265 ae734f87b2425641517250c9bbca8f87 451 Pfam PF00202 Aminotransferase class-III 35 447 1.0E-108 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ALIDE2_RS23265 ae734f87b2425641517250c9bbca8f87 451 PANTHER PTHR11986 1 447 2.7E-183 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ALIDE2_RS23265 ae734f87b2425641517250c9bbca8f87 451 SUPERFAMILY SSF53383 31 449 1.86E-114 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS23265 ae734f87b2425641517250c9bbca8f87 451 Gene3D G3DSA:3.40.640.10 74 351 8.1E-79 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS23265 ae734f87b2425641517250c9bbca8f87 451 PANTHER PTHR11986:SF80 1 447 2.7E-183 T 19-04-2016 ALIDE2_RS23265 ae734f87b2425641517250c9bbca8f87 451 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 259 296 - T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ALIDE2_RS23265 ae734f87b2425641517250c9bbca8f87 451 Gene3D G3DSA:3.90.1150.10 353 450 2.9E-39 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS23265 ae734f87b2425641517250c9bbca8f87 451 Gene3D G3DSA:3.90.1150.10 20 72 2.9E-39 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 SUPERFAMILY SSF55073 436 592 1.49E-53 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 Gene3D G3DSA:3.30.450.20 18 133 1.3E-19 T 19-04-2016 ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 142 262 3.6E-14 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 141 1.5E-21 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 Gene3D G3DSA:3.30.450.40 266 429 9.9E-16 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 SMART SM00091 143 211 0.0054 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 SMART SM00091 19 85 4.3E-9 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 Pfam PF00989 PAS fold 148 255 6.9E-15 T 19-04-2016 IPR013767 PAS fold GO:0006355 ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 Pfam PF00989 PAS fold 21 118 5.3E-12 T 19-04-2016 IPR013767 PAS fold GO:0006355 ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 429 586 1.9E-45 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 Pfam PF00990 Diguanylate cyclase, GGDEF domain 431 585 3.5E-51 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 SMART SM00052 601 845 2.0E-93 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 Gene3D G3DSA:3.30.70.270 432 600 3.4E-62 T 19-04-2016 ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 SMART SM00086 216 258 0.01 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 SMART SM00086 95 135 22.0 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 SUPERFAMILY SSF55781 280 431 2.62E-20 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 PANTHER PTHR10799:SF774 389 699 1.3E-76 T 19-04-2016 ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 Gene3D G3DSA:3.30.450.20 153 257 1.3E-20 T 19-04-2016 ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 Pfam PF00563 EAL domain 607 840 5.0E-63 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 PIRSF PIRSF005925 138 858 2.7E-252 T 19-04-2016 ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 SMART SM00065 260 428 1.3E-4 T 19-04-2016 IPR003018 GAF domain GO:0005515 ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 SUPERFAMILY SSF141868 606 852 3.4E-75 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 SUPERFAMILY SSF55785 30 144 4.89E-23 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 SMART SM00267 420 591 8.3E-72 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 PANTHER PTHR10799 389 699 1.3E-76 T 19-04-2016 ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 SUPERFAMILY SSF55785 134 256 6.28E-19 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 Gene3D G3DSA:3.20.20.450 604 852 1.4E-83 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS22170 a145b09d7a2ef28c1bda63a9897ac7e2 858 Pfam PF13185 GAF domain 277 419 1.1E-12 T 19-04-2016 IPR003018 GAF domain GO:0005515 ALIDE2_RS17140 bee31b0b57ca428c84d0908ddadf002a 206 SUPERFAMILY SSF53098 15 203 6.53E-69 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS17140 bee31b0b57ca428c84d0908ddadf002a 206 Pfam PF01351 Ribonuclease HII 22 198 1.3E-40 T 19-04-2016 IPR024567 Ribonuclease HII/HIII domain ALIDE2_RS17140 bee31b0b57ca428c84d0908ddadf002a 206 Gene3D G3DSA:3.30.420.10 20 160 8.9E-48 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS17140 bee31b0b57ca428c84d0908ddadf002a 206 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 199 37.838 T 19-04-2016 IPR022898 Ribonuclease HII GO:0004523 ALIDE2_RS17140 bee31b0b57ca428c84d0908ddadf002a 206 PANTHER PTHR10954 20 203 7.4E-81 T 19-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 ALIDE2_RS03170 a81b1fc58bacad001dd13e750a8b0d4e 800 SUPERFAMILY SSF52096 486 796 1.44E-38 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS03170 a81b1fc58bacad001dd13e750a8b0d4e 800 SUPERFAMILY SSF48179 192 313 5.95E-19 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS03170 a81b1fc58bacad001dd13e750a8b0d4e 800 PANTHER PTHR23309:SF2 4 466 1.7E-110 T 19-04-2016 ALIDE2_RS03170 a81b1fc58bacad001dd13e750a8b0d4e 800 Gene3D G3DSA:3.90.226.10 493 663 5.5E-29 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS03170 a81b1fc58bacad001dd13e750a8b0d4e 800 PANTHER PTHR23309 4 466 1.7E-110 T 19-04-2016 ALIDE2_RS03170 a81b1fc58bacad001dd13e750a8b0d4e 800 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 191 1.7E-44 T 19-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS03170 a81b1fc58bacad001dd13e750a8b0d4e 800 Gene3D G3DSA:3.40.50.720 5 194 3.4E-42 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03170 a81b1fc58bacad001dd13e750a8b0d4e 800 Pfam PF00378 Enoyl-CoA hydratase/isomerase 504 640 3.0E-20 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS03170 a81b1fc58bacad001dd13e750a8b0d4e 800 SUPERFAMILY SSF48179 344 463 2.21E-17 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS03170 a81b1fc58bacad001dd13e750a8b0d4e 800 Gene3D G3DSA:1.10.1040.10 195 295 8.8E-17 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS03170 a81b1fc58bacad001dd13e750a8b0d4e 800 Gene3D G3DSA:1.10.1040.10 347 422 6.3E-8 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS03170 a81b1fc58bacad001dd13e750a8b0d4e 800 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 194 295 1.1E-11 T 19-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS03170 a81b1fc58bacad001dd13e750a8b0d4e 800 SUPERFAMILY SSF51735 5 192 4.96E-42 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS09080 f5804f973575d326992fe76cfa0f40c8 208 Pfam PF03466 LysR substrate binding domain 8 202 3.1E-18 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS09080 f5804f973575d326992fe76cfa0f40c8 208 Gene3D G3DSA:3.40.190.10 97 179 4.8E-12 T 19-04-2016 ALIDE2_RS09080 f5804f973575d326992fe76cfa0f40c8 208 SUPERFAMILY SSF53850 10 201 6.15E-19 T 19-04-2016 ALIDE2_RS09080 f5804f973575d326992fe76cfa0f40c8 208 PANTHER PTHR30346 6 205 4.1E-15 T 19-04-2016 ALIDE2_RS09080 f5804f973575d326992fe76cfa0f40c8 208 Gene3D G3DSA:3.40.190.10 10 96 5.8E-4 T 19-04-2016 ALIDE2_RS05270 40d74e24b89f4ac953833148d276da12 398 SUPERFAMILY SSF81342 164 377 2.67E-42 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 ALIDE2_RS05270 40d74e24b89f4ac953833148d276da12 398 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 167 369 5.0E-47 T 19-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 ALIDE2_RS05270 40d74e24b89f4ac953833148d276da12 398 PANTHER PTHR30074:SF2 62 388 3.3E-73 T 19-04-2016 ALIDE2_RS05270 40d74e24b89f4ac953833148d276da12 398 Pfam PF01292 Prokaryotic cytochrome b561 170 351 6.2E-18 T 19-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ALIDE2_RS05270 40d74e24b89f4ac953833148d276da12 398 PANTHER PTHR30074 62 388 3.3E-73 T 19-04-2016 ALIDE2_RS05270 40d74e24b89f4ac953833148d276da12 398 Gene3D G3DSA:1.20.950.20 164 378 3.1E-57 T 19-04-2016 ALIDE2_RS10495 76c47343aac58d38f65f3e90590cfe92 302 Pfam PF03466 LysR substrate binding domain 97 301 6.0E-39 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS10495 76c47343aac58d38f65f3e90590cfe92 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 71 9.9E-16 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS10495 76c47343aac58d38f65f3e90590cfe92 302 PANTHER PTHR30419 6 299 1.5E-85 T 19-04-2016 ALIDE2_RS10495 76c47343aac58d38f65f3e90590cfe92 302 SUPERFAMILY SSF53850 98 301 5.43E-42 T 19-04-2016 ALIDE2_RS10495 76c47343aac58d38f65f3e90590cfe92 302 PANTHER PTHR30419:SF2 6 299 1.5E-85 T 19-04-2016 ALIDE2_RS10495 76c47343aac58d38f65f3e90590cfe92 302 Gene3D G3DSA:3.40.190.10 185 272 1.9E-19 T 19-04-2016 ALIDE2_RS10495 76c47343aac58d38f65f3e90590cfe92 302 Gene3D G3DSA:1.10.10.10 11 96 6.6E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS10495 76c47343aac58d38f65f3e90590cfe92 302 Gene3D G3DSA:3.40.190.10 98 184 2.2E-20 T 19-04-2016 ALIDE2_RS10495 76c47343aac58d38f65f3e90590cfe92 302 SUPERFAMILY SSF46785 8 121 1.31E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11550 a073d211e4f33f4ead466daae987c7de 399 Pfam PF12704 MacB-like periplasmic core domain 18 253 1.1E-14 T 19-04-2016 IPR025857 MacB-like periplasmic core domain ALIDE2_RS11550 a073d211e4f33f4ead466daae987c7de 399 Pfam PF02687 FtsX-like permease family 285 394 4.1E-13 T 19-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 ALIDE2_RS11550 a073d211e4f33f4ead466daae987c7de 399 PANTHER PTHR30489 1 183 7.3E-35 T 19-04-2016 ALIDE2_RS11550 a073d211e4f33f4ead466daae987c7de 399 PANTHER PTHR30489 218 399 7.3E-35 T 19-04-2016 ALIDE2_RS01415 dadbd807fc29dc97db2c99104c10b181 322 PANTHER PTHR30349:SF16 1 270 2.6E-94 T 19-04-2016 ALIDE2_RS01415 dadbd807fc29dc97db2c99104c10b181 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 44 319 2.5E-123 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01415 dadbd807fc29dc97db2c99104c10b181 322 PANTHER PTHR30349 1 270 2.6E-94 T 19-04-2016 ALIDE2_RS01415 dadbd807fc29dc97db2c99104c10b181 322 SUPERFAMILY SSF53850 107 279 4.7E-5 T 19-04-2016 ALIDE2_RS01415 dadbd807fc29dc97db2c99104c10b181 322 PIRSF PIRSF017082 3 322 8.1E-79 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS10605 85e0c25cde1a0787e9a9c68246ce387e 270 PANTHER PTHR21666 95 212 2.2E-16 T 19-04-2016 ALIDE2_RS10605 85e0c25cde1a0787e9a9c68246ce387e 270 Pfam PF01464 Transglycosylase SLT domain 124 202 2.0E-16 T 19-04-2016 IPR008258 Transglycosylase SLT domain 1 ALIDE2_RS10605 85e0c25cde1a0787e9a9c68246ce387e 270 SUPERFAMILY SSF53955 119 236 2.75E-23 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS10605 85e0c25cde1a0787e9a9c68246ce387e 270 Gene3D G3DSA:1.10.530.10 121 238 2.7E-23 T 19-04-2016 ALIDE2_RS21940 2276afe0ada2e94decebc30de719725d 491 PANTHER PTHR24423:SF472 138 458 2.7E-24 T 19-04-2016 ALIDE2_RS21940 2276afe0ada2e94decebc30de719725d 491 Gene3D G3DSA:3.30.565.10 336 423 1.6E-4 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS21940 2276afe0ada2e94decebc30de719725d 491 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 261 1.0E-9 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS21940 2276afe0ada2e94decebc30de719725d 491 PANTHER PTHR24423 138 458 2.7E-24 T 19-04-2016 ALIDE2_RS21940 2276afe0ada2e94decebc30de719725d 491 SUPERFAMILY SSF55874 372 427 9.37E-7 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS21940 2276afe0ada2e94decebc30de719725d 491 PANTHER PTHR24423:SF472 4 19 2.7E-24 T 19-04-2016 ALIDE2_RS21940 2276afe0ada2e94decebc30de719725d 491 Pfam PF13426 PAS domain 158 257 2.2E-11 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS21940 2276afe0ada2e94decebc30de719725d 491 PANTHER PTHR24423 4 19 2.7E-24 T 19-04-2016 ALIDE2_RS21940 2276afe0ada2e94decebc30de719725d 491 SUPERFAMILY SSF55785 158 267 1.3E-17 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS21940 2276afe0ada2e94decebc30de719725d 491 Pfam PF07568 Histidine kinase 279 345 1.8E-8 T 19-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain ALIDE2_RS21940 2276afe0ada2e94decebc30de719725d 491 Gene3D G3DSA:3.30.450.20 157 257 5.3E-17 T 19-04-2016 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 PANTHER PTHR23115:SF66 310 700 0.0 T 19-04-2016 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 PANTHER PTHR23115:SF66 6 184 0.0 T 19-04-2016 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 PANTHER PTHR23115:SF66 261 289 0.0 T 19-04-2016 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 19-04-2016 IPR031157 Tr-type G domain, conserved site ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 SUPERFAMILY SSF54980 611 698 2.4E-29 T 19-04-2016 IPR009022 Elongation factor G, III-V domain ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 SUPERFAMILY SSF54211 486 607 2.43E-44 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 SMART SM00838 608 696 1.6E-55 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 Gene3D G3DSA:2.40.30.10 312 412 1.7E-39 T 19-04-2016 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 PANTHER PTHR23115 310 700 0.0 T 19-04-2016 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 PANTHER PTHR23115 6 184 0.0 T 19-04-2016 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 PANTHER PTHR23115 261 289 0.0 T 19-04-2016 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 186 5.2E-29 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 Gene3D G3DSA:3.30.70.240 607 694 2.2E-35 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 701 0.0 T 19-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 SUPERFAMILY SSF52540 6 288 1.11E-105 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 Pfam PF14492 Elongation Factor G, domain II 411 485 1.1E-33 T 19-04-2016 IPR009022 Elongation factor G, III-V domain ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.1E-64 T 19-04-2016 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 PRINTS PR00315 GTP-binding elongation factor signature 85 95 8.4E-16 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 PRINTS PR00315 GTP-binding elongation factor signature 137 146 8.4E-16 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.4E-16 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 PRINTS PR00315 GTP-binding elongation factor signature 101 112 8.4E-16 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 8.4E-16 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 Gene3D G3DSA:3.30.230.10 491 606 1.6E-49 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 110.079 T 19-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.2E-19 T 19-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 Gene3D G3DSA:3.30.70.870 413 487 2.7E-38 T 19-04-2016 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 SUPERFAMILY SSF54980 411 488 1.33E-24 T 19-04-2016 IPR009022 Elongation factor G, III-V domain ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 SMART SM00889 487 606 2.2E-72 T 19-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 Gene3D G3DSA:3.40.50.300 6 293 9.5E-102 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 SUPERFAMILY SSF50447 312 409 9.94E-37 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 SUPERFAMILY SSF50447 255 281 9.94E-37 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 Pfam PF00679 Elongation factor G C-terminus 608 694 2.7E-31 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain ALIDE2_RS01745 51d4c7e763af641cc3a17a0fb13ae32f 702 Pfam PF03764 Elongation factor G, domain IV 486 606 2.2E-47 T 19-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ALIDE2_RS11765 63eedc99a816dd8baec95ddf9a921917 497 PANTHER PTHR11963 44 480 1.6E-171 T 19-04-2016 ALIDE2_RS11765 63eedc99a816dd8baec95ddf9a921917 497 SUPERFAMILY SSF52949 12 153 1.53E-17 T 19-04-2016 ALIDE2_RS11765 63eedc99a816dd8baec95ddf9a921917 497 SUPERFAMILY SSF53187 165 477 1.16E-118 T 19-04-2016 ALIDE2_RS11765 63eedc99a816dd8baec95ddf9a921917 497 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 6 480 34.446 T 19-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 ALIDE2_RS11765 63eedc99a816dd8baec95ddf9a921917 497 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 171 471 1.5E-119 T 19-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ALIDE2_RS11765 63eedc99a816dd8baec95ddf9a921917 497 Gene3D G3DSA:3.40.220.10 1 146 4.3E-25 T 19-04-2016 ALIDE2_RS11765 63eedc99a816dd8baec95ddf9a921917 497 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 40 133 4.1E-11 T 19-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ALIDE2_RS11765 63eedc99a816dd8baec95ddf9a921917 497 PANTHER PTHR11963:SF13 44 480 1.6E-171 T 19-04-2016 ALIDE2_RS11765 63eedc99a816dd8baec95ddf9a921917 497 Gene3D G3DSA:3.40.630.10 165 476 1.0E-132 T 19-04-2016 ALIDE2_RS11765 63eedc99a816dd8baec95ddf9a921917 497 PRINTS PR00481 Cytosol aminopeptidase signature 247 264 9.6E-56 T 19-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ALIDE2_RS11765 63eedc99a816dd8baec95ddf9a921917 497 PRINTS PR00481 Cytosol aminopeptidase signature 328 348 9.6E-56 T 19-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ALIDE2_RS11765 63eedc99a816dd8baec95ddf9a921917 497 PRINTS PR00481 Cytosol aminopeptidase signature 356 371 9.6E-56 T 19-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ALIDE2_RS11765 63eedc99a816dd8baec95ddf9a921917 497 PRINTS PR00481 Cytosol aminopeptidase signature 306 327 9.6E-56 T 19-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ALIDE2_RS11765 63eedc99a816dd8baec95ddf9a921917 497 PRINTS PR00481 Cytosol aminopeptidase signature 269 290 9.6E-56 T 19-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ALIDE2_RS11765 63eedc99a816dd8baec95ddf9a921917 497 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 332 339 - T 19-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ALIDE2_RS20920 61869f9e666f980a2f78d0fca0f8aa2a 696 PANTHER PTHR30161:SF1 5 694 0.0 T 19-04-2016 ALIDE2_RS20920 61869f9e666f980a2f78d0fca0f8aa2a 696 PANTHER PTHR30161 5 694 0.0 T 19-04-2016 ALIDE2_RS20920 61869f9e666f980a2f78d0fca0f8aa2a 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 77 96 2.1E-53 T 19-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ALIDE2_RS20920 61869f9e666f980a2f78d0fca0f8aa2a 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 244 258 2.1E-53 T 19-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ALIDE2_RS20920 61869f9e666f980a2f78d0fca0f8aa2a 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 163 181 2.1E-53 T 19-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ALIDE2_RS20920 61869f9e666f980a2f78d0fca0f8aa2a 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 40 53 2.1E-53 T 19-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ALIDE2_RS20920 61869f9e666f980a2f78d0fca0f8aa2a 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 144 160 2.1E-53 T 19-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ALIDE2_RS20920 61869f9e666f980a2f78d0fca0f8aa2a 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 193 210 2.1E-53 T 19-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ALIDE2_RS20920 61869f9e666f980a2f78d0fca0f8aa2a 696 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 26 686 2.4E-255 T 19-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 ALIDE2_RS20920 61869f9e666f980a2f78d0fca0f8aa2a 696 PIRSF PIRSF005419 8 694 5.4E-238 T 19-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ALIDE2_RS20920 61869f9e666f980a2f78d0fca0f8aa2a 696 Pfam PF00771 FHIPEP family 33 682 3.1E-256 T 19-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ALIDE2_RS20815 1efc43c4c7373d1bf69e000290894d7c 151 SUPERFAMILY SSF101801 67 148 1.7E-24 T 19-04-2016 IPR001543 Surface presentation of antigen (SpoA) ALIDE2_RS20815 1efc43c4c7373d1bf69e000290894d7c 151 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 70 139 2.4E-24 T 19-04-2016 IPR001543 Surface presentation of antigen (SpoA) ALIDE2_RS20815 1efc43c4c7373d1bf69e000290894d7c 151 PRINTS PR00956 Flagellar motor switch protein FliN signature 86 102 1.2E-27 T 19-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ALIDE2_RS20815 1efc43c4c7373d1bf69e000290894d7c 151 PRINTS PR00956 Flagellar motor switch protein FliN signature 69 85 1.2E-27 T 19-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ALIDE2_RS20815 1efc43c4c7373d1bf69e000290894d7c 151 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 115 1.2E-27 T 19-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ALIDE2_RS20815 1efc43c4c7373d1bf69e000290894d7c 151 PRINTS PR00956 Flagellar motor switch protein FliN signature 115 130 1.2E-27 T 19-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ALIDE2_RS20815 1efc43c4c7373d1bf69e000290894d7c 151 PANTHER PTHR22617 61 147 2.1E-31 T 19-04-2016 ALIDE2_RS20815 1efc43c4c7373d1bf69e000290894d7c 151 Gene3D G3DSA:2.30.330.10 64 148 8.1E-37 T 19-04-2016 ALIDE2_RS20815 1efc43c4c7373d1bf69e000290894d7c 151 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 67 141 7.2E-32 T 19-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 ALIDE2_RS22545 d63e84fdbbdd347ff09e9c0c331c8eb6 156 Pfam PF13452 N-terminal half of MaoC dehydratase 7 137 2.9E-37 T 19-04-2016 ALIDE2_RS22545 d63e84fdbbdd347ff09e9c0c331c8eb6 156 Gene3D G3DSA:3.10.129.10 6 145 6.8E-29 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS22545 d63e84fdbbdd347ff09e9c0c331c8eb6 156 PANTHER PTHR13078:SF52 17 146 3.5E-13 T 19-04-2016 ALIDE2_RS22545 d63e84fdbbdd347ff09e9c0c331c8eb6 156 SUPERFAMILY SSF54637 7 146 2.16E-32 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS22545 d63e84fdbbdd347ff09e9c0c331c8eb6 156 PANTHER PTHR13078 17 146 3.5E-13 T 19-04-2016 ALIDE2_RS22545 d63e84fdbbdd347ff09e9c0c331c8eb6 156 PIRSF PIRSF018072 1 150 9.6E-42 T 19-04-2016 IPR016709 Uncharacterised protein family UPF0336 ALIDE2_RS21950 bd5a64a23a35067e39a3e7f1c75c6ce9 161 Gene3D G3DSA:3.40.50.1010 20 148 6.7E-6 T 19-04-2016 IPR029060 PIN domain-like ALIDE2_RS21950 bd5a64a23a35067e39a3e7f1c75c6ce9 161 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 20 133 8.0E-11 T 19-04-2016 IPR002850 PIN family, putative toxin-antitoxin system toxin component ALIDE2_RS21950 bd5a64a23a35067e39a3e7f1c75c6ce9 161 PANTHER PTHR34610 15 138 2.3E-30 T 19-04-2016 ALIDE2_RS21950 bd5a64a23a35067e39a3e7f1c75c6ce9 161 Pfam PF13470 PIN domain 20 131 9.8E-22 T 19-04-2016 IPR002716 PIN domain ALIDE2_RS21950 bd5a64a23a35067e39a3e7f1c75c6ce9 161 PANTHER PTHR34610:SF3 15 138 2.3E-30 T 19-04-2016 ALIDE2_RS21950 bd5a64a23a35067e39a3e7f1c75c6ce9 161 SUPERFAMILY SSF88723 20 148 3.64E-11 T 19-04-2016 IPR029060 PIN domain-like ALIDE2_RS07555 775668bb8cabe52a74d2a18eed1a4ee0 289 SUPERFAMILY SSF53474 21 287 2.38E-43 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS07555 775668bb8cabe52a74d2a18eed1a4ee0 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 5.1E-6 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS07555 775668bb8cabe52a74d2a18eed1a4ee0 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 231 245 5.1E-6 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS07555 775668bb8cabe52a74d2a18eed1a4ee0 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 62 77 5.1E-6 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS07555 775668bb8cabe52a74d2a18eed1a4ee0 289 PANTHER PTHR10992:SF868 169 287 4.6E-39 T 19-04-2016 ALIDE2_RS07555 775668bb8cabe52a74d2a18eed1a4ee0 289 PANTHER PTHR10992:SF868 36 148 4.6E-39 T 19-04-2016 ALIDE2_RS07555 775668bb8cabe52a74d2a18eed1a4ee0 289 PRINTS PR00412 Epoxide hydrolase signature 42 60 1.3E-6 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS07555 775668bb8cabe52a74d2a18eed1a4ee0 289 PRINTS PR00412 Epoxide hydrolase signature 229 245 1.3E-6 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS07555 775668bb8cabe52a74d2a18eed1a4ee0 289 PRINTS PR00412 Epoxide hydrolase signature 62 77 1.3E-6 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS07555 775668bb8cabe52a74d2a18eed1a4ee0 289 PRINTS PR00412 Epoxide hydrolase signature 262 284 1.3E-6 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS07555 775668bb8cabe52a74d2a18eed1a4ee0 289 Pfam PF12697 Alpha/beta hydrolase family 38 277 2.2E-16 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS07555 775668bb8cabe52a74d2a18eed1a4ee0 289 PANTHER PTHR10992 169 287 4.6E-39 T 19-04-2016 ALIDE2_RS07555 775668bb8cabe52a74d2a18eed1a4ee0 289 PANTHER PTHR10992 36 148 4.6E-39 T 19-04-2016 ALIDE2_RS07555 775668bb8cabe52a74d2a18eed1a4ee0 289 Gene3D G3DSA:3.40.50.1820 11 286 2.3E-55 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS18365 9348cb62afee84203b682f8a06d8c4bc 196 SMART SM00987 29 185 1.8E-27 T 19-04-2016 ALIDE2_RS18365 9348cb62afee84203b682f8a06d8c4bc 196 SMART SM00986 29 185 1.8E-27 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like ALIDE2_RS18365 9348cb62afee84203b682f8a06d8c4bc 196 PANTHER PTHR42160:SF1 1 195 4.8E-80 T 19-04-2016 ALIDE2_RS18365 9348cb62afee84203b682f8a06d8c4bc 196 PANTHER PTHR42160 1 195 4.8E-80 T 19-04-2016 ALIDE2_RS18365 9348cb62afee84203b682f8a06d8c4bc 196 SUPERFAMILY SSF52141 5 191 8.18E-51 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like ALIDE2_RS18365 9348cb62afee84203b682f8a06d8c4bc 196 Gene3D G3DSA:3.40.470.10 5 192 2.4E-39 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like ALIDE2_RS18365 9348cb62afee84203b682f8a06d8c4bc 196 Pfam PF03167 Uracil DNA glycosylase superfamily 33 183 2.9E-21 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 Pfam PF08448 PAS fold 92 198 1.0E-8 T 19-04-2016 IPR013656 PAS fold-4 ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 SMART SM00091 336 402 4.3E-6 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 SMART SM00091 213 280 0.006 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 SMART SM00091 84 151 1.7E-6 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 Gene3D G3DSA:3.30.450.20 91 218 5.9E-14 T 19-04-2016 ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 Gene3D G3DSA:3.30.450.20 346 449 4.6E-29 T 19-04-2016 ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 SUPERFAMILY SSF141868 639 885 4.05E-90 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 SUPERFAMILY SSF55785 70 197 8.05E-13 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 SMART SM00267 450 623 1.9E-53 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 SUPERFAMILY SSF55073 466 625 1.88E-40 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 333 457 2.5E-19 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 210 334 2.3E-10 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 Pfam PF00990 Diguanylate cyclase, GGDEF domain 462 617 5.9E-40 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 SUPERFAMILY SSF55785 341 448 4.99E-29 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 SMART SM00052 633 879 1.9E-119 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 PANTHER PTHR33121:SF13 588 885 2.9E-85 T 19-04-2016 ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 Gene3D G3DSA:3.20.20.450 636 886 3.4E-101 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 Pfam PF00563 EAL domain 639 874 1.1E-76 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 457 619 4.6E-40 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 PANTHER PTHR33121 588 885 2.9E-85 T 19-04-2016 ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 SMART SM00086 158 201 19.0 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 SMART SM00086 286 328 5.7E-4 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 SMART SM00086 408 450 3.8E-8 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 Gene3D G3DSA:3.30.70.270 463 630 1.1E-47 T 19-04-2016 ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 SUPERFAMILY SSF55785 204 326 2.27E-20 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 Gene3D G3DSA:3.30.450.20 219 326 1.0E-27 T 19-04-2016 ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 Pfam PF13426 PAS domain 347 449 1.6E-17 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02290 06cf3afd478f34a424562317adeef4be 888 Pfam PF08447 PAS fold 238 321 1.1E-15 T 19-04-2016 IPR013655 PAS fold-3 GO:0005515 ALIDE2_RS19095 33ca4a1f62cf77c745adf418599e14ae 69 Pfam PF13356 Domain of unknown function (DUF4102) 2 68 2.1E-13 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 ALIDE2_RS19095 33ca4a1f62cf77c745adf418599e14ae 69 PANTHER PTHR30629:SF3 2 66 7.3E-20 T 19-04-2016 ALIDE2_RS19095 33ca4a1f62cf77c745adf418599e14ae 69 PANTHER PTHR30629 2 66 7.3E-20 T 19-04-2016 ALIDE2_RS10425 74b414ab260e965049329a98749d56ad 467 PANTHER PTHR23501 20 466 9.2E-121 T 19-04-2016 ALIDE2_RS10425 74b414ab260e965049329a98749d56ad 467 PANTHER PTHR23501:SF5 20 466 9.2E-121 T 19-04-2016 ALIDE2_RS10425 74b414ab260e965049329a98749d56ad 467 Pfam PF07690 Major Facilitator Superfamily 27 424 1.3E-42 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS10425 74b414ab260e965049329a98749d56ad 467 SUPERFAMILY SSF103473 263 464 6.41E-54 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS10425 74b414ab260e965049329a98749d56ad 467 SUPERFAMILY SSF103473 11 206 6.41E-54 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS10425 74b414ab260e965049329a98749d56ad 467 Gene3D G3DSA:1.20.1250.20 20 198 2.3E-23 T 19-04-2016 ALIDE2_RS10425 74b414ab260e965049329a98749d56ad 467 Gene3D G3DSA:1.20.1250.20 276 462 5.7E-15 T 19-04-2016 ALIDE2_RS15480 f1aa9342a350154348c8e3af85c59807 513 Pfam PF00682 HMGL-like 6 275 2.9E-94 T 19-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 ALIDE2_RS15480 f1aa9342a350154348c8e3af85c59807 513 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 200 213 - T 19-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 ALIDE2_RS15480 f1aa9342a350154348c8e3af85c59807 513 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 3 512 41.954 T 19-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 ALIDE2_RS15480 f1aa9342a350154348c8e3af85c59807 513 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 19-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 ALIDE2_RS15480 f1aa9342a350154348c8e3af85c59807 513 Pfam PF08502 LeuA allosteric (dimerisation) domain 372 502 3.7E-35 T 19-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 ALIDE2_RS15480 f1aa9342a350154348c8e3af85c59807 513 SUPERFAMILY SSF110921 396 502 8.24E-27 T 19-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 ALIDE2_RS15480 f1aa9342a350154348c8e3af85c59807 513 Gene3D G3DSA:3.20.20.70 3 349 7.2E-145 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS15480 f1aa9342a350154348c8e3af85c59807 513 PANTHER PTHR10277:SF9 3 511 1.6E-235 T 19-04-2016 ALIDE2_RS15480 f1aa9342a350154348c8e3af85c59807 513 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 500 2.3E-211 T 19-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 ALIDE2_RS15480 f1aa9342a350154348c8e3af85c59807 513 PANTHER PTHR10277 3 511 1.6E-235 T 19-04-2016 ALIDE2_RS15480 f1aa9342a350154348c8e3af85c59807 513 SMART SM00917 372 503 1.9E-40 T 19-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 ALIDE2_RS15480 f1aa9342a350154348c8e3af85c59807 513 SUPERFAMILY SSF51569 3 293 2.56E-97 T 19-04-2016 ALIDE2_RS21525 cc7f070c1ebf957657b6de66a53105b9 326 PANTHER PTHR32196:SF9 6 300 8.7E-67 T 19-04-2016 ALIDE2_RS21525 cc7f070c1ebf957657b6de66a53105b9 326 Pfam PF13407 Periplasmic binding protein domain 30 281 6.9E-52 T 19-04-2016 IPR025997 Periplasmic binding protein ALIDE2_RS21525 cc7f070c1ebf957657b6de66a53105b9 326 Gene3D G3DSA:3.40.50.2300 147 303 2.1E-43 T 19-04-2016 ALIDE2_RS21525 cc7f070c1ebf957657b6de66a53105b9 326 SUPERFAMILY SSF53822 28 304 6.92E-68 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS21525 cc7f070c1ebf957657b6de66a53105b9 326 Gene3D G3DSA:3.40.50.2300 22 146 2.3E-31 T 19-04-2016 ALIDE2_RS21525 cc7f070c1ebf957657b6de66a53105b9 326 PANTHER PTHR32196 6 300 8.7E-67 T 19-04-2016 ALIDE2_RS03475 e400773713c59125768ae22f92d466b6 636 SUPERFAMILY SSF52402 482 622 7.26E-87 T 19-04-2016 ALIDE2_RS03475 e400773713c59125768ae22f92d466b6 636 SUPERFAMILY SSF52402 236 383 7.26E-87 T 19-04-2016 ALIDE2_RS03475 e400773713c59125768ae22f92d466b6 636 Pfam PF13537 Glutamine amidotransferase domain 48 167 1.5E-49 T 19-04-2016 IPR017932 Glutamine amidotransferase type 2 domain ALIDE2_RS03475 e400773713c59125768ae22f92d466b6 636 PIRSF PIRSF001589 1 630 7.6E-173 T 19-04-2016 ALIDE2_RS03475 e400773713c59125768ae22f92d466b6 636 TIGRFAM TIGR03108 eps_aminotran_1: exosortase A system-associated amidotransferase 1 1 627 0.0 T 19-04-2016 IPR017539 Exosortase 1 system-associated amidotransferase 1 ALIDE2_RS03475 e400773713c59125768ae22f92d466b6 636 PANTHER PTHR11772:SF10 474 625 1.6E-166 T 19-04-2016 ALIDE2_RS03475 e400773713c59125768ae22f92d466b6 636 PANTHER PTHR11772:SF10 2 385 1.6E-166 T 19-04-2016 ALIDE2_RS03475 e400773713c59125768ae22f92d466b6 636 Gene3D G3DSA:3.60.20.10 1 226 3.1E-73 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS03475 e400773713c59125768ae22f92d466b6 636 SUPERFAMILY SSF56235 1 226 1.03E-63 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS03475 e400773713c59125768ae22f92d466b6 636 Pfam PF00733 Asparagine synthase 243 627 1.0E-97 T 19-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 ALIDE2_RS03475 e400773713c59125768ae22f92d466b6 636 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 562 1.1E-145 T 19-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 ALIDE2_RS03475 e400773713c59125768ae22f92d466b6 636 PANTHER PTHR11772 474 625 1.6E-166 T 19-04-2016 ALIDE2_RS03475 e400773713c59125768ae22f92d466b6 636 PANTHER PTHR11772 2 385 1.6E-166 T 19-04-2016 ALIDE2_RS03475 e400773713c59125768ae22f92d466b6 636 Gene3D G3DSA:3.40.50.620 227 379 2.5E-84 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS03475 e400773713c59125768ae22f92d466b6 636 Gene3D G3DSA:3.40.50.620 477 627 2.5E-84 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS19075 f043831cdca33ebaddfeccf8ea629883 593 PIRSF PIRSF016493 3 591 1.8E-190 T 19-04-2016 IPR024191 Peptidase M61 ALIDE2_RS19075 f043831cdca33ebaddfeccf8ea629883 593 Gene3D G3DSA:2.30.42.10 470 557 4.6E-6 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS19075 f043831cdca33ebaddfeccf8ea629883 593 SUPERFAMILY SSF50156 478 521 1.33E-5 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS19075 f043831cdca33ebaddfeccf8ea629883 593 SUPERFAMILY SSF55486 221 458 4.17E-17 T 19-04-2016 ALIDE2_RS19075 f043831cdca33ebaddfeccf8ea629883 593 Pfam PF05299 M61 glycyl aminopeptidase 282 398 6.4E-50 T 19-04-2016 IPR007963 Peptidase M61, catalytic domain ALIDE2_RS18475 e9255fe13416421e61e6650b3421e836 555 Gene3D G3DSA:1.20.58.220 443 521 9.7E-7 T 19-04-2016 ALIDE2_RS18475 e9255fe13416421e61e6650b3421e836 555 Gene3D G3DSA:1.20.58.220 335 424 7.7E-10 T 19-04-2016 ALIDE2_RS18475 e9255fe13416421e61e6650b3421e836 555 Pfam PF01895 PhoU domain 343 424 4.8E-10 T 19-04-2016 IPR026022 PhoU domain ALIDE2_RS18475 e9255fe13416421e61e6650b3421e836 555 Pfam PF01895 PhoU domain 445 528 1.3E-5 T 19-04-2016 IPR026022 PhoU domain ALIDE2_RS18475 e9255fe13416421e61e6650b3421e836 555 PANTHER PTHR10010:SF26 1 447 4.3E-29 T 19-04-2016 ALIDE2_RS18475 e9255fe13416421e61e6650b3421e836 555 SUPERFAMILY SSF109755 320 532 9.52E-34 T 19-04-2016 ALIDE2_RS18475 e9255fe13416421e61e6650b3421e836 555 Pfam PF02690 Na+/Pi-cotransporter 13 146 7.4E-34 T 19-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 ALIDE2_RS18475 e9255fe13416421e61e6650b3421e836 555 Pfam PF02690 Na+/Pi-cotransporter 139 253 6.3E-11 T 19-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 ALIDE2_RS18475 e9255fe13416421e61e6650b3421e836 555 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 2 306 9.7E-75 T 19-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 ALIDE2_RS18475 e9255fe13416421e61e6650b3421e836 555 PANTHER PTHR10010 1 447 4.3E-29 T 19-04-2016 ALIDE2_RS20025 2fc06acdbbbca179f407c49a8cec8126 360 Pfam PF08331 Domain of unknown function (DUF1730) 59 143 4.2E-22 T 19-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS20025 2fc06acdbbbca179f407c49a8cec8126 360 Gene3D G3DSA:3.30.70.20 193 260 1.1E-6 T 19-04-2016 ALIDE2_RS20025 2fc06acdbbbca179f407c49a8cec8126 360 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 4 318 48.498 T 19-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS20025 2fc06acdbbbca179f407c49a8cec8126 360 PANTHER PTHR30002 1 358 3.0E-147 T 19-04-2016 ALIDE2_RS20025 2fc06acdbbbca179f407c49a8cec8126 360 Pfam PF13484 4Fe-4S double cluster binding domain 195 259 8.0E-20 T 19-04-2016 ALIDE2_RS20025 2fc06acdbbbca179f407c49a8cec8126 360 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 11 358 6.4E-135 T 19-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS20025 2fc06acdbbbca179f407c49a8cec8126 360 PANTHER PTHR30002:SF4 1 358 3.0E-147 T 19-04-2016 ALIDE2_RS20025 2fc06acdbbbca179f407c49a8cec8126 360 SUPERFAMILY SSF54862 174 320 4.02E-16 T 19-04-2016 ALIDE2_RS20025 2fc06acdbbbca179f407c49a8cec8126 360 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 196 207 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS11555 f8fba05e3116fc088bab8ab5ee777050 236 SUPERFAMILY SSF52540 6 229 8.68E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11555 f8fba05e3116fc088bab8ab5ee777050 236 SMART SM00382 34 231 1.5E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS11555 f8fba05e3116fc088bab8ab5ee777050 236 Gene3D G3DSA:3.40.50.300 5 228 8.4E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11555 f8fba05e3116fc088bab8ab5ee777050 236 Pfam PF00005 ABC transporter 25 176 5.9E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS11555 f8fba05e3116fc088bab8ab5ee777050 236 PANTHER PTHR24220 7 228 9.6E-81 T 19-04-2016 ALIDE2_RS11555 f8fba05e3116fc088bab8ab5ee777050 236 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS17630 d7f7787f18bc8679626fead86f33bb29 435 SUPERFAMILY SSF53474 64 253 7.66E-28 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS17630 d7f7787f18bc8679626fead86f33bb29 435 SUPERFAMILY SSF53474 412 424 7.66E-28 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS17630 d7f7787f18bc8679626fead86f33bb29 435 SUPERFAMILY SSF53474 286 383 7.66E-28 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS17630 d7f7787f18bc8679626fead86f33bb29 435 PANTHER PTHR10824:SF4 8 423 3.0E-68 T 19-04-2016 ALIDE2_RS17630 d7f7787f18bc8679626fead86f33bb29 435 Gene3D G3DSA:3.40.50.1820 312 423 1.8E-25 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS17630 d7f7787f18bc8679626fead86f33bb29 435 Gene3D G3DSA:3.40.50.1820 137 255 1.8E-25 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS17630 d7f7787f18bc8679626fead86f33bb29 435 PANTHER PTHR10824 8 423 3.0E-68 T 19-04-2016 ALIDE2_RS17630 d7f7787f18bc8679626fead86f33bb29 435 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 198 427 1.4E-55 T 19-04-2016 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal ALIDE2_RS17630 d7f7787f18bc8679626fead86f33bb29 435 PIRSF PIRSF016521 1 434 8.5E-105 T 19-04-2016 IPR016662 Acyl-CoA thioesterase, long chain GO:0006637|GO:0016790 ALIDE2_RS17630 d7f7787f18bc8679626fead86f33bb29 435 Pfam PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region 16 135 1.3E-32 T 19-04-2016 IPR006862 Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase ALIDE2_RS11340 ff2bd0c930d1245980fa47c8db86b09d 141 SUPERFAMILY SSF50199 5 132 1.7E-31 T 19-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold ALIDE2_RS11340 ff2bd0c930d1245980fa47c8db86b09d 141 SMART SM00318 6 125 1.1E-24 T 19-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold ALIDE2_RS11340 ff2bd0c930d1245980fa47c8db86b09d 141 Gene3D G3DSA:2.40.50.90 8 131 6.8E-25 T 19-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold ALIDE2_RS11340 ff2bd0c930d1245980fa47c8db86b09d 141 Pfam PF00565 Staphylococcal nuclease homologue 32 125 1.6E-19 T 19-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold ALIDE2_RS11340 ff2bd0c930d1245980fa47c8db86b09d 141 PANTHER PTHR12302 10 141 6.4E-29 T 19-04-2016 ALIDE2_RS11340 ff2bd0c930d1245980fa47c8db86b09d 141 PANTHER PTHR12302:SF0 10 141 6.4E-29 T 19-04-2016 ALIDE2_RS16155 7d12b7db06d50537fd2327eb274e277b 261 Pfam PF13616 PPIC-type PPIASE domain 129 223 1.0E-22 T 19-04-2016 ALIDE2_RS16155 7d12b7db06d50537fd2327eb274e277b 261 PANTHER PTHR10657:SF11 1 11 1.1E-35 T 19-04-2016 ALIDE2_RS16155 7d12b7db06d50537fd2327eb274e277b 261 PANTHER PTHR10657:SF11 107 261 1.1E-35 T 19-04-2016 ALIDE2_RS16155 7d12b7db06d50537fd2327eb274e277b 261 SUPERFAMILY SSF54534 133 227 2.22E-28 T 19-04-2016 ALIDE2_RS16155 7d12b7db06d50537fd2327eb274e277b 261 PANTHER PTHR10657 1 11 1.1E-35 T 19-04-2016 ALIDE2_RS16155 7d12b7db06d50537fd2327eb274e277b 261 PANTHER PTHR10657 107 261 1.1E-35 T 19-04-2016 ALIDE2_RS16155 7d12b7db06d50537fd2327eb274e277b 261 Gene3D G3DSA:3.10.50.40 130 247 1.0E-41 T 19-04-2016 ALIDE2_RS16155 7d12b7db06d50537fd2327eb274e277b 261 SUPERFAMILY SSF109998 27 161 2.51E-16 T 19-04-2016 IPR027304 Trigger factor/SurA domain ALIDE2_RS02595 4383fd99563969c6e82f3ce103b9c80d 137 Pfam PF01042 Endoribonuclease L-PSP 35 135 3.2E-15 T 19-04-2016 IPR006175 YjgF/YER057c/UK114 family ALIDE2_RS02595 4383fd99563969c6e82f3ce103b9c80d 137 Gene3D G3DSA:3.30.1330.40 23 136 3.4E-24 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ALIDE2_RS02595 4383fd99563969c6e82f3ce103b9c80d 137 SUPERFAMILY SSF55298 14 136 5.5E-25 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ALIDE2_RS02595 4383fd99563969c6e82f3ce103b9c80d 137 PANTHER PTHR11803 30 129 4.4E-19 T 19-04-2016 IPR006175 YjgF/YER057c/UK114 family ALIDE2_RS12985 ee839dd0201c708e49cd2198700abd71 212 SMART SM00882 6 205 2.7E-82 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS12985 ee839dd0201c708e49cd2198700abd71 212 Pfam PF01144 Coenzyme A transferase 7 203 6.2E-39 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS12985 ee839dd0201c708e49cd2198700abd71 212 Gene3D G3DSA:3.40.810.20 3 210 2.5E-90 T 19-04-2016 ALIDE2_RS12985 ee839dd0201c708e49cd2198700abd71 212 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 210 6.5E-94 T 19-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 ALIDE2_RS12985 ee839dd0201c708e49cd2198700abd71 212 PANTHER PTHR13707 3 207 1.6E-120 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS12985 ee839dd0201c708e49cd2198700abd71 212 SUPERFAMILY SSF100950 3 210 1.18E-69 T 19-04-2016 ALIDE2_RS12410 666ded8a8c9bec02225d81411752ad33 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 314 3.3E-19 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12410 666ded8a8c9bec02225d81411752ad33 323 PANTHER PTHR30349 14 278 4.5E-99 T 19-04-2016 ALIDE2_RS12410 666ded8a8c9bec02225d81411752ad33 323 PIRSF PIRSF017082 1 323 1.1E-63 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12410 666ded8a8c9bec02225d81411752ad33 323 SUPERFAMILY SSF53850 84 226 2.86E-6 T 19-04-2016 ALIDE2_RS12410 666ded8a8c9bec02225d81411752ad33 323 PANTHER PTHR30349:SF29 14 278 4.5E-99 T 19-04-2016 ALIDE2_RS09300 ea3eed9f49686eb6780ef374516affce 324 PANTHER PTHR30349:SF32 22 316 1.2E-68 T 19-04-2016 ALIDE2_RS09300 ea3eed9f49686eb6780ef374516affce 324 PIRSF PIRSF017082 2 323 2.0E-67 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS09300 ea3eed9f49686eb6780ef374516affce 324 SUPERFAMILY SSF53850 102 286 2.44E-14 T 19-04-2016 ALIDE2_RS09300 ea3eed9f49686eb6780ef374516affce 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 320 2.3E-65 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS09300 ea3eed9f49686eb6780ef374516affce 324 Gene3D G3DSA:3.40.190.10 130 229 8.3E-5 T 19-04-2016 ALIDE2_RS09300 ea3eed9f49686eb6780ef374516affce 324 PANTHER PTHR30349 22 316 1.2E-68 T 19-04-2016 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 10 267 34.675 T 19-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 19-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 Gene3D G3DSA:3.40.1160.10 6 269 7.5E-55 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 Pfam PF01472 PUA domain 286 360 4.8E-18 T 19-04-2016 IPR002478 PUA domain GO:0003723 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 SMART SM00359 286 365 9.0E-10 T 19-04-2016 IPR002478 PUA domain GO:0003723 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 SUPERFAMILY SSF88697 286 376 9.94E-22 T 19-04-2016 IPR015947 PUA-like domain ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 SUPERFAMILY SSF53633 10 265 2.75E-64 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 1.1E-45 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 1.1E-45 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 1.1E-45 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 1.1E-45 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 1.1E-45 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 PIRSF PIRSF000729 5 377 1.6E-123 T 19-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 PANTHER PTHR11063:SF6 8 379 3.0E-111 T 19-04-2016 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 376 3.6E-124 T 19-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 PANTHER PTHR11063 8 379 3.0E-111 T 19-04-2016 ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 Gene3D G3DSA:2.30.130.10 283 375 9.0E-27 T 19-04-2016 IPR015947 PUA-like domain ALIDE2_RS04450 a0a243dd39668da28bcecd1b5960c97d 379 Pfam PF00696 Amino acid kinase family 11 242 5.5E-39 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS11820 490830d4a9953743c785bac5a6ec0dd5 170 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 6 125 1.1E-32 T 19-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 ALIDE2_RS11820 490830d4a9953743c785bac5a6ec0dd5 170 PANTHER PTHR37164 2 142 6.6E-34 T 19-04-2016 ALIDE2_RS11820 490830d4a9953743c785bac5a6ec0dd5 170 SUPERFAMILY SSF47188 1 125 2.35E-29 T 19-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 ALIDE2_RS11820 490830d4a9953743c785bac5a6ec0dd5 170 Pfam PF01814 Hemerythrin HHE cation binding domain 14 125 4.7E-12 T 19-04-2016 IPR012312 Haemerythrin-like ALIDE2_RS11820 490830d4a9953743c785bac5a6ec0dd5 170 Gene3D G3DSA:1.20.120.50 1 125 4.9E-33 T 19-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 ALIDE2_RS11820 490830d4a9953743c785bac5a6ec0dd5 170 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 19-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 ALIDE2_RS03210 6f23c035e98efa4c74201fdbb7c093f7 343 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 43 278 3.2E-60 T 19-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 ALIDE2_RS03210 6f23c035e98efa4c74201fdbb7c093f7 343 PANTHER PTHR33376 1 343 9.8E-70 T 19-04-2016 ALIDE2_RS03210 6f23c035e98efa4c74201fdbb7c093f7 343 PIRSF PIRSF006470 1 340 2.9E-85 T 19-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 ALIDE2_RS03210 6f23c035e98efa4c74201fdbb7c093f7 343 SUPERFAMILY SSF53850 73 125 6.21E-9 T 19-04-2016 ALIDE2_RS03210 6f23c035e98efa4c74201fdbb7c093f7 343 SUPERFAMILY SSF53850 158 256 6.21E-9 T 19-04-2016 ALIDE2_RS03210 6f23c035e98efa4c74201fdbb7c093f7 343 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 37 322 9.2E-74 T 19-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 ALIDE2_RS19230 3412fef4eeb9d0f0d82a7b4beb7fc670 352 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 19-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 ALIDE2_RS19230 3412fef4eeb9d0f0d82a7b4beb7fc670 352 PANTHER PTHR11082:SF25 1 321 9.7E-127 T 19-04-2016 ALIDE2_RS19230 3412fef4eeb9d0f0d82a7b4beb7fc670 352 Gene3D G3DSA:1.10.1200.80 255 329 8.0E-23 T 19-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 ALIDE2_RS19230 3412fef4eeb9d0f0d82a7b4beb7fc670 352 PANTHER PTHR11082 1 321 9.7E-127 T 19-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ALIDE2_RS19230 3412fef4eeb9d0f0d82a7b4beb7fc670 352 PIRSF PIRSF006621 1 327 1.1E-102 T 19-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ALIDE2_RS19230 3412fef4eeb9d0f0d82a7b4beb7fc670 352 SUPERFAMILY SSF51395 10 321 1.3E-85 T 19-04-2016 ALIDE2_RS19230 3412fef4eeb9d0f0d82a7b4beb7fc670 352 Pfam PF01207 Dihydrouridine synthase (Dus) 14 314 5.4E-102 T 19-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ALIDE2_RS19230 3412fef4eeb9d0f0d82a7b4beb7fc670 352 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 324 47.977 T 19-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 ALIDE2_RS19230 3412fef4eeb9d0f0d82a7b4beb7fc670 352 Gene3D G3DSA:3.20.20.70 8 247 1.7E-80 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS19230 3412fef4eeb9d0f0d82a7b4beb7fc670 352 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 321 1.1E-116 T 19-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 Gene3D G3DSA:3.40.50.720 242 388 2.2E-31 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 Gene3D G3DSA:3.40.50.720 1 151 4.6E-38 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 SUPERFAMILY SSF51735 1 150 1.08E-27 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 SUPERFAMILY SSF116726 136 226 8.63E-6 T 19-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 PANTHER PTHR13789 1 169 3.5E-40 T 19-04-2016 ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 PANTHER PTHR13789 449 489 3.5E-40 T 19-04-2016 ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 Pfam PF02080 TrkA-C domain 155 227 1.9E-6 T 19-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 Pfam PF02254 TrkA-N domain 3 115 4.0E-22 T 19-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 Pfam PF02254 TrkA-N domain 243 362 3.6E-19 T 19-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 SUPERFAMILY SSF51735 241 388 9.63E-24 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.0E-20 T 19-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.0E-20 T 19-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.0E-20 T 19-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.0E-20 T 19-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.0E-20 T 19-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 PANTHER PTHR13789:SF225 1 169 3.5E-40 T 19-04-2016 ALIDE2_RS22100 2c5e3f60029922daa30eb5849e092916 491 PANTHER PTHR13789:SF225 449 489 3.5E-40 T 19-04-2016 ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 Gene3D G3DSA:3.30.450.20 313 431 9.5E-19 T 19-04-2016 ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 SMART SM00388 447 513 1.0E-7 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 Pfam PF00512 His Kinase A (phospho-acceptor) domain 449 511 1.5E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 Gene3D G3DSA:1.10.287.130 448 507 2.0E-7 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 320 433 6.7E-16 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 Gene3D G3DSA:3.30.565.10 518 676 7.3E-29 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 SMART SM00091 322 388 2.2E-6 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 655 2.9E-8 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 2.9E-8 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 674 2.9E-8 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 SUPERFAMILY SSF55874 502 675 2.69E-28 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 PANTHER PTHR24423 320 687 1.4E-51 T 19-04-2016 ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 PANTHER PTHR24423 13 26 1.4E-51 T 19-04-2016 ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 SUPERFAMILY SSF47384 449 511 2.16E-9 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 Pfam PF08448 PAS fold 328 432 1.6E-11 T 19-04-2016 IPR013656 PAS fold-4 ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 SMART SM00387 559 677 4.9E-14 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 560 675 1.4E-11 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20235 a5b2c8f4782bb6cc2605eebc0288dca5 692 SUPERFAMILY SSF55785 313 431 1.48E-19 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS01210 56a186ef034794b2f2f6fbe78d2c42b5 68 Gene3D G3DSA:2.60.260.40 19 63 3.3E-16 T 19-04-2016 IPR019401 Zinc finger, CHCC-type ALIDE2_RS01210 56a186ef034794b2f2f6fbe78d2c42b5 68 Pfam PF10276 Zinc-finger domain 32 56 4.1E-10 T 19-04-2016 IPR019401 Zinc finger, CHCC-type ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 Pfam PF01926 50S ribosome-binding GTPase 225 346 5.0E-22 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 Gene3D G3DSA:3.30.1360.120 3 128 1.4E-40 T 19-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 Gene3D G3DSA:3.40.50.300 293 385 7.4E-6 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 7 465 32.249 T 19-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 Gene3D G3DSA:3.40.50.300 220 253 4.6E-7 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 Gene3D G3DSA:1.20.120.430 129 189 3.4E-56 T 19-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 Gene3D G3DSA:1.20.120.430 254 278 3.4E-56 T 19-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 Gene3D G3DSA:1.20.120.430 394 465 3.4E-56 T 19-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 PANTHER PTHR11649 10 465 4.9E-147 T 19-04-2016 ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 PANTHER PTHR11649:SF56 10 465 4.9E-147 T 19-04-2016 ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 SUPERFAMILY SSF52540 204 382 2.28E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 SUPERFAMILY SSF52540 73 170 2.28E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 Pfam PF10396 GTP-binding protein TrmE N-terminus 8 127 4.7E-35 T 19-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 Pfam PF12631 MnmE helical domain 130 462 3.9E-58 T 19-04-2016 IPR025867 MnmE, helical domain ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 223 379 2.5E-18 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 226 246 7.6E-6 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 275 290 7.6E-6 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 13 465 1.2E-92 T 19-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 SUPERFAMILY SSF116878 128 227 1.44E-49 T 19-04-2016 ALIDE2_RS23450 d671e164470fc924f715e25b3c3e6ac8 465 SUPERFAMILY SSF116878 389 465 1.44E-49 T 19-04-2016 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 SUPERFAMILY SSF55190 2 112 6.54E-18 T 19-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 92 8.4E-19 T 19-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 Gene3D G3DSA:1.10.730.10 454 567 3.4E-44 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 SMART SM00836 448 567 1.2E-50 T 19-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 Pfam PF00750 tRNA synthetases class I (R) 101 416 2.0E-25 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 Gene3D G3DSA:3.30.1360.70 2 110 1.1E-26 T 19-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 SUPERFAMILY SSF47323 443 567 4.51E-36 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 Hamap MF_00123 Arginine--tRNA ligase [argS]. 2 567 23.902 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 135 1.9E-22 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 PRINTS PR01038 Arginyl-tRNA synthetase signature 159 172 1.9E-22 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 PRINTS PR01038 Arginyl-tRNA synthetase signature 315 336 1.9E-22 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 PRINTS PR01038 Arginyl-tRNA synthetase signature 135 151 1.9E-22 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 Pfam PF05746 DALR anticodon binding domain 448 567 3.5E-33 T 19-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 PANTHER PTHR11956 1 567 1.7E-201 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 6 567 1.1E-118 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 PANTHER PTHR11956:SF6 1 567 1.7E-201 T 19-04-2016 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 130 139 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 SMART SM01016 6 92 2.1E-26 T 19-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 Gene3D G3DSA:3.40.50.620 115 453 8.3E-109 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS21995 bc9d0f295c9be633b45aa1480f06f23c 567 SUPERFAMILY SSF52374 115 459 1.69E-84 T 19-04-2016 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 859 0.0 T 19-04-2016 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|UniPathway: UPA00946 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 Gene3D G3DSA:3.20.19.10 605 857 5.0E-62 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 PRINTS PR00415 Aconitase family signature 162 170 9.4E-28 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 PRINTS PR00415 Aconitase family signature 267 280 9.4E-28 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 PRINTS PR00415 Aconitase family signature 191 204 9.4E-28 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 PRINTS PR00415 Aconitase family signature 138 151 9.4E-28 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 PRINTS PR00415 Aconitase family signature 205 220 9.4E-28 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 PRINTS PR00415 Aconitase family signature 464 477 9.4E-28 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 PRINTS PR00415 Aconitase family signature 281 294 9.4E-28 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 PRINTS PR00415 Aconitase family signature 402 413 9.4E-28 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 PRINTS PR00415 Aconitase family signature 360 374 9.4E-28 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 Gene3D G3DSA:3.30.499.10 356 543 4.8E-54 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 Pfam PF00330 Aconitase family (aconitate hydratase) 70 533 8.2E-146 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 PANTHER PTHR11670:SF43 720 861 0.0 T 19-04-2016 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 PANTHER PTHR11670:SF43 1 682 0.0 T 19-04-2016 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 SUPERFAMILY SSF53732 11 586 2.35E-179 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 Gene3D G3DSA:3.40.1060.10 238 355 2.5E-32 T 19-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 SUPERFAMILY SSF52016 599 857 1.39E-67 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 Pfam PF00694 Aconitase C-terminal domain 662 787 2.4E-31 T 19-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 PANTHER PTHR11670 720 861 0.0 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 PANTHER PTHR11670 1 682 0.0 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10475 77d3f722a977388145ee49a7cad21461 865 Gene3D G3DSA:3.30.499.10 22 237 2.6E-59 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS10275 cc23d8464c30f5535b4c8855f031e6ee 627 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 19-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 ALIDE2_RS10275 cc23d8464c30f5535b4c8855f031e6ee 627 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 326 1.7E-41 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS10275 cc23d8464c30f5535b4c8855f031e6ee 627 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 599 8.0E-209 T 19-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 ALIDE2_RS10275 cc23d8464c30f5535b4c8855f031e6ee 627 PANTHER PTHR23076 1 591 2.0E-279 T 19-04-2016 ALIDE2_RS10275 cc23d8464c30f5535b4c8855f031e6ee 627 Gene3D G3DSA:3.40.50.300 149 335 6.6E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10275 cc23d8464c30f5535b4c8855f031e6ee 627 SUPERFAMILY SSF52540 148 398 1.18E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10275 cc23d8464c30f5535b4c8855f031e6ee 627 Gene3D G3DSA:1.10.8.60 336 402 3.3E-27 T 19-04-2016 ALIDE2_RS10275 cc23d8464c30f5535b4c8855f031e6ee 627 SUPERFAMILY SSF140990 408 603 2.35E-63 T 19-04-2016 ALIDE2_RS10275 cc23d8464c30f5535b4c8855f031e6ee 627 Pfam PF01434 Peptidase family M41 389 598 1.6E-67 T 19-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 ALIDE2_RS10275 cc23d8464c30f5535b4c8855f031e6ee 627 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 10 613 35.507 T 19-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 ALIDE2_RS10275 cc23d8464c30f5535b4c8855f031e6ee 627 SMART SM00382 189 329 7.7E-23 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS10275 cc23d8464c30f5535b4c8855f031e6ee 627 Pfam PF06480 FtsH Extracellular 11 95 2.7E-6 T 19-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 ALIDE2_RS19135 e0be757da3e239bebcaca418170607a2 64 Pfam PF13193 AMP-binding enzyme C-terminal domain 1 52 4.4E-6 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS19135 e0be757da3e239bebcaca418170607a2 64 SUPERFAMILY SSF56801 1 63 6.54E-11 T 19-04-2016 ALIDE2_RS19135 e0be757da3e239bebcaca418170607a2 64 Gene3D G3DSA:3.30.300.30 1 61 4.2E-10 T 19-04-2016 ALIDE2_RS22275 7533df83b2245bae67006d9513c28846 328 SUPERFAMILY SSF143865 1 266 4.58E-37 T 19-04-2016 ALIDE2_RS22275 7533df83b2245bae67006d9513c28846 328 SUPERFAMILY SSF144083 262 324 9.55E-20 T 19-04-2016 ALIDE2_RS22275 7533df83b2245bae67006d9513c28846 328 PANTHER PTHR21535:SF37 2 327 3.1E-96 T 19-04-2016 ALIDE2_RS22275 7533df83b2245bae67006d9513c28846 328 PANTHER PTHR21535 2 327 3.1E-96 T 19-04-2016 ALIDE2_RS22275 7533df83b2245bae67006d9513c28846 328 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 327 8.5E-69 T 19-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 ALIDE2_RS22275 7533df83b2245bae67006d9513c28846 328 Pfam PF01544 CorA-like Mg2+ transporter protein 29 323 4.3E-55 T 19-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 ALIDE2_RS22275 7533df83b2245bae67006d9513c28846 328 Gene3D G3DSA:1.20.58.340 251 327 7.3E-27 T 19-04-2016 ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 189 1.5E-5 T 19-04-2016 ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 PANTHER PTHR24322 14 142 6.7E-55 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 PANTHER PTHR24322 158 193 6.7E-55 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 SUPERFAMILY SSF51735 8 251 2.42E-84 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 Gene3D G3DSA:3.40.50.720 7 251 1.8E-88 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 8.5E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 8.5E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 8.5E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 8.5E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 8.5E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 8.5E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 250 1.9E-64 T 19-04-2016 ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 PANTHER PTHR24322:SF328 14 142 6.7E-55 T 19-04-2016 ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 PANTHER PTHR24322:SF328 158 193 6.7E-55 T 19-04-2016 ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.4E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.4E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS09190 e702f5c26b9cb44b11c6d6ae59a9a122 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.4E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 SUPERFAMILY SSF82714 183 265 3.14E-15 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 Pfam PF00873 AcrB/AcrD/AcrF family 4 1014 0.0 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 PANTHER PTHR32063:SF34 1 1038 0.0 T 19-04-2016 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 Gene3D G3DSA:3.30.70.1430 564 652 2.0E-10 T 19-04-2016 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 Gene3D G3DSA:1.10.3850.10 800 1016 3.6E-49 T 19-04-2016 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 SUPERFAMILY SSF82693 669 707 3.49E-7 T 19-04-2016 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 SUPERFAMILY SSF82866 290 491 5.36E-48 T 19-04-2016 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 SUPERFAMILY SSF82693 561 652 2.2E-16 T 19-04-2016 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 SUPERFAMILY SSF82866 817 1015 2.35E-39 T 19-04-2016 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 SUPERFAMILY SSF82693 40 134 2.88E-21 T 19-04-2016 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 SUPERFAMILY SSF82714 710 791 1.06E-16 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 PANTHER PTHR32063 1 1038 0.0 T 19-04-2016 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 SUPERFAMILY SSF82693 136 182 2.09E-23 T 19-04-2016 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 SUPERFAMILY SSF82693 268 324 2.09E-23 T 19-04-2016 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 SUPERFAMILY SSF82693 794 834 3.49E-7 T 19-04-2016 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 Gene3D G3DSA:3.30.2090.10 183 262 5.0E-14 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 Gene3D G3DSA:3.30.2090.10 711 792 8.1E-18 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 1.8E-79 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.8E-79 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.8E-79 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.8E-79 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.8E-79 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.8E-79 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.8E-79 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.8E-79 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 1.8E-79 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 Gene3D G3DSA:1.20.1640.10 285 497 8.4E-57 T 19-04-2016 ALIDE2_RS06925 22220e5ab0336a3fd4d5803e0ae160b8 1041 Gene3D G3DSA:3.30.70.1430 40 142 2.1E-27 T 19-04-2016 ALIDE2_RS19035 2b0801e61fc36332de0e0ddf6cc88951 567 Gene3D G3DSA:3.30.450.20 202 314 3.4E-11 T 19-04-2016 ALIDE2_RS19035 2b0801e61fc36332de0e0ddf6cc88951 567 PANTHER PTHR24423 199 526 1.2E-45 T 19-04-2016 ALIDE2_RS19035 2b0801e61fc36332de0e0ddf6cc88951 567 PANTHER PTHR24423 24 42 1.2E-45 T 19-04-2016 ALIDE2_RS19035 2b0801e61fc36332de0e0ddf6cc88951 567 SUPERFAMILY SSF47384 323 392 4.32E-14 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS19035 2b0801e61fc36332de0e0ddf6cc88951 567 SUPERFAMILY SSF55874 415 530 2.88E-22 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS19035 2b0801e61fc36332de0e0ddf6cc88951 567 Pfam PF00512 His Kinase A (phospho-acceptor) domain 328 392 1.8E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS19035 2b0801e61fc36332de0e0ddf6cc88951 567 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 439 539 1.7E-10 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS19035 2b0801e61fc36332de0e0ddf6cc88951 567 Gene3D G3DSA:1.10.287.130 324 389 6.9E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS19035 2b0801e61fc36332de0e0ddf6cc88951 567 Gene3D G3DSA:3.30.565.10 402 532 7.3E-22 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS19035 2b0801e61fc36332de0e0ddf6cc88951 567 SMART SM00387 438 553 5.3E-19 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS19035 2b0801e61fc36332de0e0ddf6cc88951 567 SMART SM00388 328 393 5.8E-16 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS19035 2b0801e61fc36332de0e0ddf6cc88951 567 SUPERFAMILY SSF55785 191 313 6.09E-6 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS19035 2b0801e61fc36332de0e0ddf6cc88951 567 Pfam PF13188 PAS domain 206 243 1.2E-4 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS22750 a9852b50c77e330aa2eed13367a08305 204 SUPERFAMILY SSF52833 1 101 3.2E-21 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS22750 a9852b50c77e330aa2eed13367a08305 204 PANTHER PTHR11260 1 203 3.2E-40 T 19-04-2016 ALIDE2_RS22750 a9852b50c77e330aa2eed13367a08305 204 Pfam PF13410 Glutathione S-transferase, C-terminal domain 123 187 5.6E-9 T 19-04-2016 ALIDE2_RS22750 a9852b50c77e330aa2eed13367a08305 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 4.4E-19 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ALIDE2_RS22750 a9852b50c77e330aa2eed13367a08305 204 Gene3D G3DSA:1.20.1050.10 90 201 1.9E-18 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS22750 a9852b50c77e330aa2eed13367a08305 204 Gene3D G3DSA:3.40.30.10 1 89 3.8E-26 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS22750 a9852b50c77e330aa2eed13367a08305 204 PANTHER PTHR11260:SF256 1 203 3.2E-40 T 19-04-2016 ALIDE2_RS22750 a9852b50c77e330aa2eed13367a08305 204 SUPERFAMILY SSF47616 69 203 1.81E-22 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS02855 a2177b1b03bf3459203014f28cea993a 228 Pfam PF13410 Glutathione S-transferase, C-terminal domain 138 208 1.5E-6 T 19-04-2016 ALIDE2_RS02855 a2177b1b03bf3459203014f28cea993a 228 Gene3D G3DSA:1.20.1050.10 96 214 1.4E-44 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS02855 a2177b1b03bf3459203014f28cea993a 228 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 85 5.0E-16 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ALIDE2_RS02855 a2177b1b03bf3459203014f28cea993a 228 SUPERFAMILY SSF52833 3 90 1.18E-21 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS02855 a2177b1b03bf3459203014f28cea993a 228 Gene3D G3DSA:3.40.30.10 10 95 4.6E-23 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS02855 a2177b1b03bf3459203014f28cea993a 228 PANTHER PTHR11260:SF144 8 204 1.7E-47 T 19-04-2016 ALIDE2_RS02855 a2177b1b03bf3459203014f28cea993a 228 PANTHER PTHR11260 8 204 1.7E-47 T 19-04-2016 ALIDE2_RS02855 a2177b1b03bf3459203014f28cea993a 228 SUPERFAMILY SSF47616 85 207 1.85E-16 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS00075 b572961c81c24e83112a8c2f4d5c380d 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 2.1E-19 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00075 b572961c81c24e83112a8c2f4d5c380d 280 PANTHER PTHR30579:SF4 1 273 2.5E-75 T 19-04-2016 ALIDE2_RS00075 b572961c81c24e83112a8c2f4d5c380d 280 SUPERFAMILY SSF53850 91 271 9.59E-25 T 19-04-2016 ALIDE2_RS00075 b572961c81c24e83112a8c2f4d5c380d 280 Gene3D G3DSA:1.10.10.10 2 82 7.0E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00075 b572961c81c24e83112a8c2f4d5c380d 280 Gene3D G3DSA:3.40.190.10 88 186 1.3E-13 T 19-04-2016 ALIDE2_RS00075 b572961c81c24e83112a8c2f4d5c380d 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.4E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00075 b572961c81c24e83112a8c2f4d5c380d 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.4E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00075 b572961c81c24e83112a8c2f4d5c380d 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.4E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00075 b572961c81c24e83112a8c2f4d5c380d 280 Gene3D G3DSA:3.40.190.10 187 232 4.2E-9 T 19-04-2016 ALIDE2_RS00075 b572961c81c24e83112a8c2f4d5c380d 280 SUPERFAMILY SSF46785 2 85 9.8E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00075 b572961c81c24e83112a8c2f4d5c380d 280 PANTHER PTHR30579 1 273 2.5E-75 T 19-04-2016 ALIDE2_RS00075 b572961c81c24e83112a8c2f4d5c380d 280 Pfam PF03466 LysR substrate binding domain 89 271 2.5E-23 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS15305 0f63e0b4cb101894308186fb1b88caf4 398 Pfam PF13458 Periplasmic binding protein 36 371 7.0E-68 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS15305 0f63e0b4cb101894308186fb1b88caf4 398 SUPERFAMILY SSF53822 35 373 4.37E-81 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS15305 0f63e0b4cb101894308186fb1b88caf4 398 Gene3D G3DSA:3.40.50.2300 157 306 1.6E-22 T 19-04-2016 ALIDE2_RS15305 0f63e0b4cb101894308186fb1b88caf4 398 PANTHER PTHR30483 12 369 1.1E-64 T 19-04-2016 ALIDE2_RS15305 0f63e0b4cb101894308186fb1b88caf4 398 Gene3D G3DSA:3.40.50.2300 307 360 2.0E-41 T 19-04-2016 ALIDE2_RS15305 0f63e0b4cb101894308186fb1b88caf4 398 Gene3D G3DSA:3.40.50.2300 31 156 2.0E-41 T 19-04-2016 ALIDE2_RS05060 da2c8b24c7e5491cef4edbf900ed5446 580 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 57 372 3.1E-100 T 19-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 ALIDE2_RS05060 da2c8b24c7e5491cef4edbf900ed5446 580 PANTHER PTHR11236 98 457 3.8E-119 T 19-04-2016 ALIDE2_RS05060 da2c8b24c7e5491cef4edbf900ed5446 580 Pfam PF01063 Amino-transferase class IV 382 576 2.2E-28 T 19-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 ALIDE2_RS05060 da2c8b24c7e5491cef4edbf900ed5446 580 Gene3D G3DSA:3.60.120.10 94 376 4.7E-107 T 19-04-2016 IPR005801 ADC synthase GO:0009058 ALIDE2_RS05060 da2c8b24c7e5491cef4edbf900ed5446 580 SUPERFAMILY SSF56322 17 375 1.19E-98 T 19-04-2016 IPR005801 ADC synthase GO:0009058 ALIDE2_RS05060 da2c8b24c7e5491cef4edbf900ed5446 580 Pfam PF00425 chorismate binding enzyme 113 369 7.6E-81 T 19-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal ALIDE2_RS05060 da2c8b24c7e5491cef4edbf900ed5446 580 PANTHER PTHR11236:SF18 98 457 3.8E-119 T 19-04-2016 ALIDE2_RS05060 da2c8b24c7e5491cef4edbf900ed5446 580 Gene3D G3DSA:3.30.470.10 380 448 7.7E-5 T 19-04-2016 ALIDE2_RS05060 da2c8b24c7e5491cef4edbf900ed5446 580 SUPERFAMILY SSF56752 329 575 2.22E-33 T 19-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 ALIDE2_RS05060 da2c8b24c7e5491cef4edbf900ed5446 580 Gene3D G3DSA:3.20.10.10 471 574 2.3E-29 T 19-04-2016 ALIDE2_RS05060 da2c8b24c7e5491cef4edbf900ed5446 580 PRINTS PR00095 Anthranilate synthase component I signature 307 321 6.8E-9 T 19-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 ALIDE2_RS05060 da2c8b24c7e5491cef4edbf900ed5446 580 PRINTS PR00095 Anthranilate synthase component I signature 227 240 6.8E-9 T 19-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 ALIDE2_RS05060 da2c8b24c7e5491cef4edbf900ed5446 580 PRINTS PR00095 Anthranilate synthase component I signature 213 226 6.8E-9 T 19-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 SUPERFAMILY SSF52374 5 331 8.81E-82 T 19-04-2016 ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 Gene3D G3DSA:3.40.50.620 4 210 4.8E-74 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 332 35.972 T 19-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 PANTHER PTHR10055 1 335 3.4E-191 T 19-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 151 172 8.6E-18 T 19-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 68 87 8.6E-18 T 19-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 8.6E-18 T 19-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 8.6E-18 T 19-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 Gene3D G3DSA:3.30.160.160 355 398 5.6E-6 T 19-04-2016 IPR010879 Domain of unknown function DUF1508 ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 SUPERFAMILY SSF160113 353 401 1.44E-10 T 19-04-2016 IPR010879 Domain of unknown function DUF1508 ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 Pfam PF00579 tRNA synthetases class I (W and Y) 4 281 9.3E-55 T 19-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 PANTHER PTHR10055:SF11 1 335 3.4E-191 T 19-04-2016 ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 Pfam PF07411 Domain of unknown function (DUF1508) 361 400 3.6E-6 T 19-04-2016 IPR010879 Domain of unknown function DUF1508 ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 331 1.1E-87 T 19-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 ALIDE2_RS05465 d9c0d10a26b3ab63ed459f5bc95f960c 434 Gene3D G3DSA:1.10.240.10 211 298 8.9E-29 T 19-04-2016 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 PANTHER PTHR10617 248 345 8.3E-50 T 19-04-2016 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 PANTHER PTHR10617 386 455 8.3E-50 T 19-04-2016 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 PANTHER PTHR10617 12 225 8.3E-50 T 19-04-2016 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 SUPERFAMILY SSF160996 251 391 3.14E-9 T 19-04-2016 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 Pfam PF03486 HI0933-like protein 250 447 4.1E-43 T 19-04-2016 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 Pfam PF03486 HI0933-like protein 18 221 7.4E-60 T 19-04-2016 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 19 41 3.5E-5 T 19-04-2016 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 295 302 3.5E-5 T 19-04-2016 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 SUPERFAMILY SSF51905 17 214 6.92E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 SUPERFAMILY SSF51905 393 451 6.92E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 PANTHER PTHR10617:SF103 248 345 8.3E-50 T 19-04-2016 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 PANTHER PTHR10617:SF103 386 455 8.3E-50 T 19-04-2016 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 PANTHER PTHR10617:SF103 12 225 8.3E-50 T 19-04-2016 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 40 220 4.5E-79 T 19-04-2016 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 247 454 8.2E-73 T 19-04-2016 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 Gene3D G3DSA:3.50.50.60 17 210 2.4E-38 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS13215 035092dd12c94bfdb01652d5013cfc57 458 Gene3D G3DSA:3.50.50.60 396 449 2.4E-38 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS23015 c5aef426c237685f217d745d1e826ac4 455 SUPERFAMILY SSF52440 5 119 1.94E-44 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS23015 c5aef426c237685f217d745d1e826ac4 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 158 172 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS23015 c5aef426c237685f217d745d1e826ac4 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS23015 c5aef426c237685f217d745d1e826ac4 455 Gene3D G3DSA:3.30.470.20 209 450 3.6E-84 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS23015 c5aef426c237685f217d745d1e826ac4 455 Gene3D G3DSA:3.40.50.20 8 135 5.1E-44 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS23015 c5aef426c237685f217d745d1e826ac4 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 8 115 1.4E-41 T 19-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain ALIDE2_RS23015 c5aef426c237685f217d745d1e826ac4 455 Pfam PF02785 Biotin carboxylase C-terminal domain 342 445 6.4E-35 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS23015 c5aef426c237685f217d745d1e826ac4 455 SUPERFAMILY SSF56059 89 353 1.03E-60 T 19-04-2016 ALIDE2_RS23015 c5aef426c237685f217d745d1e826ac4 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 122 327 3.6E-57 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS23015 c5aef426c237685f217d745d1e826ac4 455 Gene3D G3DSA:3.30.1490.20 142 206 3.2E-18 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS23015 c5aef426c237685f217d745d1e826ac4 455 SUPERFAMILY SSF51246 337 449 9.42E-37 T 19-04-2016 IPR011054 Rudiment single hybrid motif ALIDE2_RS23015 c5aef426c237685f217d745d1e826ac4 455 PANTHER PTHR18866 8 444 4.8E-197 T 19-04-2016 ALIDE2_RS23015 c5aef426c237685f217d745d1e826ac4 455 SMART SM00878 342 447 2.1E-49 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS15245 65cc316ba3f01c52f90b12e842e0b43a 418 Gene3D G3DSA:1.10.150.130 114 214 3.1E-9 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS15245 65cc316ba3f01c52f90b12e842e0b43a 418 Pfam PF13356 Domain of unknown function (DUF4102) 9 99 4.9E-16 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 ALIDE2_RS15245 65cc316ba3f01c52f90b12e842e0b43a 418 PANTHER PTHR30629 3 411 2.6E-51 T 19-04-2016 ALIDE2_RS15245 65cc316ba3f01c52f90b12e842e0b43a 418 Gene3D G3DSA:1.10.443.10 238 394 3.5E-20 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS15245 65cc316ba3f01c52f90b12e842e0b43a 418 Pfam PF00589 Phage integrase family 242 362 3.7E-13 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS15245 65cc316ba3f01c52f90b12e842e0b43a 418 SUPERFAMILY SSF56349 114 402 2.03E-48 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS15245 65cc316ba3f01c52f90b12e842e0b43a 418 PANTHER PTHR30629:SF4 3 411 2.6E-51 T 19-04-2016 ALIDE2_RS04215 67581e108668edab9e08fab637a1675d 129 SUPERFAMILY SSF141734 2 121 1.96E-47 T 19-04-2016 ALIDE2_RS04215 67581e108668edab9e08fab637a1675d 129 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 29 106 1.6E-33 T 19-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 ALIDE2_RS04215 67581e108668edab9e08fab637a1675d 129 PANTHER PTHR21256 3 129 3.8E-59 T 19-04-2016 ALIDE2_RS04215 67581e108668edab9e08fab637a1675d 129 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 52 106 4.0E-25 T 19-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 ALIDE2_RS04215 67581e108668edab9e08fab637a1675d 129 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 3 110 31.539 T 19-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 ALIDE2_RS15665 cc9d0be8f5d0ed4c3f5b0b0911dccbb2 224 SUPERFAMILY SSF89562 19 186 4.45E-38 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS15665 cc9d0be8f5d0ed4c3f5b0b0911dccbb2 224 PANTHER PTHR33254:SF5 3 211 1.1E-37 T 19-04-2016 ALIDE2_RS15665 cc9d0be8f5d0ed4c3f5b0b0911dccbb2 224 PANTHER PTHR33254 3 211 1.1E-37 T 19-04-2016 ALIDE2_RS15665 cc9d0be8f5d0ed4c3f5b0b0911dccbb2 224 Gene3D G3DSA:3.50.30.40 19 184 4.0E-40 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS15665 cc9d0be8f5d0ed4c3f5b0b0911dccbb2 224 Pfam PF03737 Demethylmenaquinone methyltransferase 21 175 3.9E-33 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS07760 28680309ac8198ec27cb8358cbf95dbc 265 PANTHER PTHR30136 13 263 8.5E-96 T 19-04-2016 ALIDE2_RS07760 28680309ac8198ec27cb8358cbf95dbc 265 Gene3D G3DSA:1.10.10.10 12 88 1.4E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07760 28680309ac8198ec27cb8358cbf95dbc 265 Pfam PF01614 Bacterial transcriptional regulator 138 253 1.5E-6 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS07760 28680309ac8198ec27cb8358cbf95dbc 265 Gene3D G3DSA:3.30.450.40 89 263 5.4E-32 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS07760 28680309ac8198ec27cb8358cbf95dbc 265 PANTHER PTHR30136:SF4 13 263 8.5E-96 T 19-04-2016 ALIDE2_RS07760 28680309ac8198ec27cb8358cbf95dbc 265 SUPERFAMILY SSF55781 76 263 7.85E-35 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS07760 28680309ac8198ec27cb8358cbf95dbc 265 Pfam PF09339 IclR helix-turn-helix domain 20 67 1.2E-14 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS07760 28680309ac8198ec27cb8358cbf95dbc 265 SUPERFAMILY SSF46785 18 90 6.3E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07760 28680309ac8198ec27cb8358cbf95dbc 265 SMART SM00346 18 108 1.8E-23 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS15570 6b376ee7e61f889ef8de0c2c1eb607e7 552 PANTHER PTHR23090 3 548 2.0E-155 T 19-04-2016 ALIDE2_RS15570 6b376ee7e61f889ef8de0c2c1eb607e7 552 Gene3D G3DSA:3.40.50.620 267 534 3.4E-75 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS15570 6b376ee7e61f889ef8de0c2c1eb607e7 552 SUPERFAMILY SSF52402 270 536 2.56E-77 T 19-04-2016 ALIDE2_RS15570 6b376ee7e61f889ef8de0c2c1eb607e7 552 Pfam PF00795 Carbon-nitrogen hydrolase 6 253 3.2E-30 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ALIDE2_RS15570 6b376ee7e61f889ef8de0c2c1eb607e7 552 Gene3D G3DSA:3.60.110.10 2 250 1.3E-57 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ALIDE2_RS15570 6b376ee7e61f889ef8de0c2c1eb607e7 552 PIRSF PIRSF006630 2 552 8.6E-192 T 19-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 ALIDE2_RS15570 6b376ee7e61f889ef8de0c2c1eb607e7 552 TIGRFAM TIGR00552 nadE: NAD+ synthetase 280 529 5.1E-60 T 19-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 ALIDE2_RS15570 6b376ee7e61f889ef8de0c2c1eb607e7 552 Pfam PF02540 NAD synthase 273 527 2.6E-72 T 19-04-2016 IPR022310 NAD/GMP synthase ALIDE2_RS15570 6b376ee7e61f889ef8de0c2c1eb607e7 552 SUPERFAMILY SSF56317 4 250 1.16E-57 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ALIDE2_RS17715 26421232770ebd49ca9b8254244a24cb 207 SMART SM00419 149 197 1.4E-6 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS17715 26421232770ebd49ca9b8254244a24cb 207 Gene3D G3DSA:2.60.120.10 11 114 2.6E-7 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS17715 26421232770ebd49ca9b8254244a24cb 207 SUPERFAMILY SSF51206 11 117 6.55E-8 T 19-04-2016 IPR018490 Cyclic nucleotide-binding-like ALIDE2_RS17715 26421232770ebd49ca9b8254244a24cb 207 Gene3D G3DSA:1.10.10.10 130 206 8.5E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17715 26421232770ebd49ca9b8254244a24cb 207 SUPERFAMILY SSF46785 130 205 2.4E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17715 26421232770ebd49ca9b8254244a24cb 207 Pfam PF13545 Crp-like helix-turn-helix domain 133 202 8.0E-13 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS20560 fdb3aaad1b30890e2b5dd124199f6f0a 221 Pfam PF14497 Glutathione S-transferase, C-terminal domain 121 199 6.7E-5 T 19-04-2016 IPR004046 Glutathione S-transferase, C-terminal ALIDE2_RS20560 fdb3aaad1b30890e2b5dd124199f6f0a 221 Gene3D G3DSA:3.40.30.10 2 80 4.9E-18 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS20560 fdb3aaad1b30890e2b5dd124199f6f0a 221 PANTHER PTHR11260 2 203 4.6E-63 T 19-04-2016 ALIDE2_RS20560 fdb3aaad1b30890e2b5dd124199f6f0a 221 SUPERFAMILY SSF47616 90 202 9.47E-18 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS20560 fdb3aaad1b30890e2b5dd124199f6f0a 221 PANTHER PTHR11260:SF253 2 203 4.6E-63 T 19-04-2016 ALIDE2_RS20560 fdb3aaad1b30890e2b5dd124199f6f0a 221 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 77 3.4E-11 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ALIDE2_RS20560 fdb3aaad1b30890e2b5dd124199f6f0a 221 Gene3D G3DSA:1.20.1050.10 87 200 2.3E-15 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS20560 fdb3aaad1b30890e2b5dd124199f6f0a 221 SUPERFAMILY SSF52833 1 80 7.33E-16 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS21445 ba8360132b40e0d99e67dbe8f6e8bb65 162 PANTHER PTHR39338 16 100 5.6E-12 T 19-04-2016 ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 452 7.1E-190 T 19-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 SMART SM00382 93 247 1.4E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 Gene3D G3DSA:3.40.50.300 61 278 6.2E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 SUPERFAMILY SSF52540 72 296 1.52E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 PRINTS PR01874 DNA repair protein radA signature 85 113 2.7E-93 T 19-04-2016 ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 PRINTS PR01874 DNA repair protein radA signature 177 201 2.7E-93 T 19-04-2016 ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 PRINTS PR01874 DNA repair protein radA signature 251 277 2.7E-93 T 19-04-2016 ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 PRINTS PR01874 DNA repair protein radA signature 10 34 2.7E-93 T 19-04-2016 ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 PRINTS PR01874 DNA repair protein radA signature 127 144 2.7E-93 T 19-04-2016 ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 PRINTS PR01874 DNA repair protein radA signature 216 244 2.7E-93 T 19-04-2016 ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 PRINTS PR01874 DNA repair protein radA signature 324 347 2.7E-93 T 19-04-2016 ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 SUPERFAMILY SSF54211 258 272 3.07E-38 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 SUPERFAMILY SSF54211 306 458 3.07E-38 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 Pfam PF13481 AAA domain 68 225 3.3E-17 T 19-04-2016 ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 PANTHER PTHR32472 1 457 2.1E-201 T 19-04-2016 ALIDE2_RS01185 db4f7433daea145bfd6cc6dad0d7315d 460 Gene3D G3DSA:3.30.230.10 287 456 4.6E-33 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALIDE2_RS12160 7fada8fb5d9f03efc88a35e2565e7af9 472 Pfam PF07690 Major Facilitator Superfamily 18 409 3.6E-48 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS12160 7fada8fb5d9f03efc88a35e2565e7af9 472 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 418 1.8E-77 T 19-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 ALIDE2_RS12160 7fada8fb5d9f03efc88a35e2565e7af9 472 SUPERFAMILY SSF103473 4 195 9.94E-64 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS12160 7fada8fb5d9f03efc88a35e2565e7af9 472 SUPERFAMILY SSF103473 248 463 9.94E-64 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS12160 7fada8fb5d9f03efc88a35e2565e7af9 472 PANTHER PTHR23501:SF1 14 455 2.6E-210 T 19-04-2016 ALIDE2_RS12160 7fada8fb5d9f03efc88a35e2565e7af9 472 PANTHER PTHR23501 14 455 2.6E-210 T 19-04-2016 ALIDE2_RS12160 7fada8fb5d9f03efc88a35e2565e7af9 472 Gene3D G3DSA:1.20.1250.20 15 189 3.4E-30 T 19-04-2016 ALIDE2_RS12160 7fada8fb5d9f03efc88a35e2565e7af9 472 Gene3D G3DSA:1.20.1250.20 265 466 2.4E-19 T 19-04-2016 ALIDE2_RS12160 7fada8fb5d9f03efc88a35e2565e7af9 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 1.5E-8 T 19-04-2016 ALIDE2_RS12160 7fada8fb5d9f03efc88a35e2565e7af9 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 1.5E-8 T 19-04-2016 ALIDE2_RS12160 7fada8fb5d9f03efc88a35e2565e7af9 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 400 419 1.5E-8 T 19-04-2016 ALIDE2_RS12160 7fada8fb5d9f03efc88a35e2565e7af9 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 1.5E-8 T 19-04-2016 ALIDE2_RS21785 3cbde210384d042887238f20ea8bcf3f 586 Gene3D G3DSA:1.10.287.950 277 482 3.6E-61 T 19-04-2016 ALIDE2_RS21785 3cbde210384d042887238f20ea8bcf3f 586 SMART SM00304 210 262 1.1E-9 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS21785 3cbde210384d042887238f20ea8bcf3f 586 PANTHER PTHR32089:SF63 163 513 4.7E-156 T 19-04-2016 ALIDE2_RS21785 3cbde210384d042887238f20ea8bcf3f 586 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 8.4E-59 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS21785 3cbde210384d042887238f20ea8bcf3f 586 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 8.4E-59 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS21785 3cbde210384d042887238f20ea8bcf3f 586 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 8.4E-59 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS21785 3cbde210384d042887238f20ea8bcf3f 586 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 313 8.4E-59 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS21785 3cbde210384d042887238f20ea8bcf3f 586 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 8.4E-59 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS21785 3cbde210384d042887238f20ea8bcf3f 586 PANTHER PTHR32089 163 513 4.7E-156 T 19-04-2016 ALIDE2_RS21785 3cbde210384d042887238f20ea8bcf3f 586 SUPERFAMILY SSF58104 230 511 6.41E-74 T 19-04-2016 ALIDE2_RS21785 3cbde210384d042887238f20ea8bcf3f 586 Pfam PF00672 HAMP domain 190 258 1.1E-14 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS21785 3cbde210384d042887238f20ea8bcf3f 586 SMART SM00283 263 510 5.6E-91 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS21785 3cbde210384d042887238f20ea8bcf3f 586 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 509 5.1E-61 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS21785 3cbde210384d042887238f20ea8bcf3f 586 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 169 9.1E-15 T 19-04-2016 IPR024478 4HB MCP domain ALIDE2_RS10670 4acab0392da83a680a22bbdd9402974f 126 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 7 118 18.245 T 19-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 ALIDE2_RS10670 4acab0392da83a680a22bbdd9402974f 126 Gene3D G3DSA:3.30.300.20 9 118 3.6E-33 T 19-04-2016 IPR015946 K homology domain-like, alpha/beta ALIDE2_RS10670 4acab0392da83a680a22bbdd9402974f 126 Pfam PF02033 Ribosome-binding factor A 13 111 3.0E-26 T 19-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 ALIDE2_RS10670 4acab0392da83a680a22bbdd9402974f 126 SUPERFAMILY SSF89919 9 113 1.23E-27 T 19-04-2016 IPR023799 Ribosome-binding factor A domain ALIDE2_RS10670 4acab0392da83a680a22bbdd9402974f 126 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 10 112 5.4E-22 T 19-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 ALIDE2_RS10670 4acab0392da83a680a22bbdd9402974f 126 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 14 98 4.0E-36 T 19-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 ALIDE2_RS10670 4acab0392da83a680a22bbdd9402974f 126 PANTHER PTHR33515 14 126 9.4E-29 T 19-04-2016 ALIDE2_RS13085 82157dcffd904d817375c61ff4ddeb20 297 SUPERFAMILY SSF161098 20 271 2.49E-55 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS13085 82157dcffd904d817375c61ff4ddeb20 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 271 2.2E-15 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS13085 82157dcffd904d817375c61ff4ddeb20 297 PANTHER PTHR30406:SF1 15 286 1.7E-164 T 19-04-2016 ALIDE2_RS13085 82157dcffd904d817375c61ff4ddeb20 297 Gene3D G3DSA:1.10.3720.10 22 280 1.3E-50 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS13085 82157dcffd904d817375c61ff4ddeb20 297 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 17 277 1.7E-101 T 19-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 ALIDE2_RS13085 82157dcffd904d817375c61ff4ddeb20 297 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 21 280 5.9E-129 T 19-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 ALIDE2_RS13085 82157dcffd904d817375c61ff4ddeb20 297 PANTHER PTHR30406 15 286 1.7E-164 T 19-04-2016 ALIDE2_RS02530 866c5fd5760f9e14183f1d59db65bb42 248 PANTHER PTHR21600 1 242 3.8E-66 T 19-04-2016 ALIDE2_RS02530 866c5fd5760f9e14183f1d59db65bb42 248 SUPERFAMILY SSF55120 60 246 4.32E-34 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS02530 866c5fd5760f9e14183f1d59db65bb42 248 Pfam PF01479 S4 domain 1 46 3.5E-9 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS02530 866c5fd5760f9e14183f1d59db65bb42 248 PANTHER PTHR21600:SF25 1 242 3.8E-66 T 19-04-2016 ALIDE2_RS02530 866c5fd5760f9e14183f1d59db65bb42 248 Gene3D G3DSA:3.10.290.10 1 51 7.8E-19 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS02530 866c5fd5760f9e14183f1d59db65bb42 248 SMART SM00363 1 59 5.0E-6 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS02530 866c5fd5760f9e14183f1d59db65bb42 248 Pfam PF00849 RNA pseudouridylate synthase 62 212 9.4E-11 T 19-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS02530 866c5fd5760f9e14183f1d59db65bb42 248 SUPERFAMILY SSF55174 1 75 4.45E-16 T 19-04-2016 ALIDE2_RS18780 4e4bfc879d7a6755a5b723a5a4efb7be 174 SUPERFAMILY SSF54534 4 144 5.11E-20 T 19-04-2016 ALIDE2_RS18780 4e4bfc879d7a6755a5b723a5a4efb7be 174 Gene3D G3DSA:3.10.50.40 26 67 1.2E-5 T 19-04-2016 ALIDE2_RS18780 4e4bfc879d7a6755a5b723a5a4efb7be 174 Gene3D G3DSA:3.10.50.40 126 145 1.2E-5 T 19-04-2016 ALIDE2_RS12300 f574b25963663fe2cd75aacdf1cc3037 227 SUPERFAMILY SSF54862 20 147 2.22E-25 T 19-04-2016 ALIDE2_RS12300 f574b25963663fe2cd75aacdf1cc3037 227 Pfam PF04060 Putative Fe-S cluster 25 57 2.0E-14 T 19-04-2016 IPR007202 4Fe-4S domain GO:0051536 ALIDE2_RS12300 f574b25963663fe2cd75aacdf1cc3037 227 Pfam PF14697 4Fe-4S dicluster domain 90 144 2.1E-16 T 19-04-2016 ALIDE2_RS12300 f574b25963663fe2cd75aacdf1cc3037 227 PANTHER PTHR11938:SF64 19 145 4.1E-39 T 19-04-2016 ALIDE2_RS12300 f574b25963663fe2cd75aacdf1cc3037 227 Gene3D G3DSA:3.30.70.20 102 162 4.8E-16 T 19-04-2016 ALIDE2_RS12300 f574b25963663fe2cd75aacdf1cc3037 227 PANTHER PTHR11938 19 145 4.1E-39 T 19-04-2016 ALIDE2_RS12300 f574b25963663fe2cd75aacdf1cc3037 227 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 97 108 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS12300 f574b25963663fe2cd75aacdf1cc3037 227 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 127 138 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS12300 f574b25963663fe2cd75aacdf1cc3037 227 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 4 166 1.4E-58 T 19-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 ALIDE2_RS12300 f574b25963663fe2cd75aacdf1cc3037 227 Gene3D G3DSA:3.30.70.20 24 101 5.7E-7 T 19-04-2016 ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 Pfam PF00158 Sigma-54 interaction domain 319 486 4.9E-66 T 19-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 SMART SM00382 339 483 2.2E-12 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 Gene3D G3DSA:1.10.8.60 494 565 2.2E-17 T 19-04-2016 ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 Gene3D G3DSA:1.10.10.60 596 630 4.4E-9 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 Gene3D G3DSA:3.40.50.300 317 492 1.5E-53 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 343 356 - T 19-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 PANTHER PTHR32071:SF5 246 637 1.2E-135 T 19-04-2016 ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 PANTHER PTHR32071 246 637 1.2E-135 T 19-04-2016 ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 406 421 - T 19-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 SUPERFAMILY SSF46689 596 633 1.97E-7 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 597 614 6.1E-5 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 614 634 6.1E-5 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 Pfam PF02954 Bacterial regulatory protein, Fis family 596 631 4.9E-8 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 SUPERFAMILY SSF52540 319 562 1.69E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 Gene3D G3DSA:3.30.450.20 211 270 2.6E-4 T 19-04-2016 ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 532 541 - T 19-04-2016 IPR025944 Sigma-54 interaction domain, conserved site ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 Gene3D G3DSA:3.30.450.40 145 196 6.5E-4 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS12595 0b2e7cd2787c52b00c1c23f04f3eb25d 641 SUPERFAMILY SSF55781 57 193 2.71E-10 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 SUPERFAMILY SSF55021 677 750 6.25E-6 T 19-04-2016 ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 SUPERFAMILY SSF81301 211 422 6.87E-56 T 19-04-2016 ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 Pfam PF13328 HD domain 56 205 5.3E-49 T 19-04-2016 IPR003607 HD/PDEase domain ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 PANTHER PTHR21262 1 751 2.7E-301 T 19-04-2016 ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 Pfam PF02824 TGS domain 418 477 3.2E-19 T 19-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 56 745 1.5E-210 T 19-04-2016 IPR004811 RelA/SpoT family GO:0015969 ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 SMART SM00954 265 375 1.4E-59 T 19-04-2016 IPR007685 RelA/SpoT GO:0015969 ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 SMART SM00471 71 183 8.7E-10 T 19-04-2016 IPR003607 HD/PDEase domain ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 Gene3D G3DSA:3.30.70.260 675 745 6.3E-6 T 19-04-2016 ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 SUPERFAMILY SSF109604 40 221 3.11E-70 T 19-04-2016 ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 Gene3D G3DSA:3.30.460.10 223 355 4.1E-41 T 19-04-2016 ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 PANTHER PTHR21262:SF0 1 751 2.7E-301 T 19-04-2016 ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 SUPERFAMILY SSF81271 405 477 9.16E-20 T 19-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 Gene3D G3DSA:3.10.20.30 418 478 1.4E-16 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 Pfam PF04607 Region found in RelA / SpoT proteins 265 375 2.9E-32 T 19-04-2016 IPR007685 RelA/SpoT GO:0015969 ALIDE2_RS19830 700d24086e477ead3a20c6c67f48c97b 754 Pfam PF13291 ACT domain 673 748 2.3E-14 T 19-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 ALIDE2_RS11455 929c8a5290a7e6b0cdb606586f33e7e9 337 PANTHER PTHR10366 2 326 3.0E-75 T 19-04-2016 ALIDE2_RS11455 929c8a5290a7e6b0cdb606586f33e7e9 337 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 1.6E-23 T 19-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 ALIDE2_RS11455 929c8a5290a7e6b0cdb606586f33e7e9 337 Gene3D G3DSA:3.40.50.720 1 198 1.1E-32 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11455 929c8a5290a7e6b0cdb606586f33e7e9 337 SUPERFAMILY SSF51735 1 325 9.85E-46 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11455 929c8a5290a7e6b0cdb606586f33e7e9 337 Gene3D G3DSA:3.90.25.10 199 309 2.0E-35 T 19-04-2016 ALIDE2_RS11455 929c8a5290a7e6b0cdb606586f33e7e9 337 PANTHER PTHR10366:SF228 2 326 3.0E-75 T 19-04-2016 ALIDE2_RS08590 b6c17f3e001635e6b07e1e40b2da35a3 160 SMART SM00530 99 154 9.2E-7 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS08590 b6c17f3e001635e6b07e1e40b2da35a3 160 Gene3D G3DSA:1.10.260.40 101 151 3.6E-11 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS08590 b6c17f3e001635e6b07e1e40b2da35a3 160 SUPERFAMILY SSF47413 97 151 1.61E-10 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS08590 b6c17f3e001635e6b07e1e40b2da35a3 160 Pfam PF01381 Helix-turn-helix 102 151 1.7E-7 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 Gene3D G3DSA:1.20.140.10 594 759 3.8E-30 T 19-04-2016 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 Gene3D G3DSA:2.40.110.10 498 593 5.0E-37 T 19-04-2016 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 SUPERFAMILY SSF47203 605 757 4.49E-18 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 PANTHER PTHR10909:SF229 389 760 9.9E-133 T 19-04-2016 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 499 593 1.9E-20 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 SUPERFAMILY SSF47203 232 376 1.5E-37 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 Gene3D G3DSA:1.20.140.10 233 375 4.9E-36 T 19-04-2016 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 PANTHER PTHR10909 389 760 9.9E-133 T 19-04-2016 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 388 495 7.4E-23 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 124 1.2E-13 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 605 756 3.4E-18 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 375 7.0E-27 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 Gene3D G3DSA:1.10.540.10 11 126 4.4E-19 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 Gene3D G3DSA:2.40.110.10 130 206 7.7E-10 T 19-04-2016 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 SUPERFAMILY SSF56645 389 617 1.7E-72 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 Gene3D G3DSA:1.10.540.10 388 497 4.5E-28 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS09210 7d132e9ebc6e04277a99bb2e2362b4ef 760 SUPERFAMILY SSF56645 9 213 1.15E-38 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS12015 e5f259804c9a7faf59ec30d55a2fe867 229 Gene3D G3DSA:3.30.70.260 140 197 3.2E-26 T 19-04-2016 ALIDE2_RS12015 e5f259804c9a7faf59ec30d55a2fe867 229 PANTHER PTHR11934 7 228 1.6E-107 T 19-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 ALIDE2_RS12015 e5f259804c9a7faf59ec30d55a2fe867 229 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 55 223 1.0E-56 T 19-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 ALIDE2_RS12015 e5f259804c9a7faf59ec30d55a2fe867 229 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 13 224 8.8E-65 T 19-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 ALIDE2_RS12015 e5f259804c9a7faf59ec30d55a2fe867 229 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 9 227 32.565 T 19-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 ALIDE2_RS12015 e5f259804c9a7faf59ec30d55a2fe867 229 PANTHER PTHR11934:SF11 7 228 1.6E-107 T 19-04-2016 ALIDE2_RS12015 e5f259804c9a7faf59ec30d55a2fe867 229 SUPERFAMILY SSF75445 132 208 1.96E-21 T 19-04-2016 ALIDE2_RS12015 e5f259804c9a7faf59ec30d55a2fe867 229 Gene3D G3DSA:3.40.50.1360 8 139 2.0E-54 T 19-04-2016 ALIDE2_RS12015 e5f259804c9a7faf59ec30d55a2fe867 229 SUPERFAMILY SSF100950 9 153 7.85E-44 T 19-04-2016 ALIDE2_RS22500 ba4df3152ce19a9eac5416742c3ad356 232 Gene3D G3DSA:3.40.30.10 7 99 1.9E-29 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS22500 ba4df3152ce19a9eac5416742c3ad356 232 PANTHER PTHR11260 19 229 9.9E-71 T 19-04-2016 ALIDE2_RS22500 ba4df3152ce19a9eac5416742c3ad356 232 PANTHER PTHR11260:SF178 19 229 9.9E-71 T 19-04-2016 ALIDE2_RS22500 ba4df3152ce19a9eac5416742c3ad356 232 SUPERFAMILY SSF47616 100 228 1.67E-33 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS22500 ba4df3152ce19a9eac5416742c3ad356 232 Gene3D G3DSA:1.20.1050.10 100 224 2.6E-40 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS22500 ba4df3152ce19a9eac5416742c3ad356 232 Pfam PF02798 Glutathione S-transferase, N-terminal domain 19 97 4.8E-13 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ALIDE2_RS22500 ba4df3152ce19a9eac5416742c3ad356 232 SUPERFAMILY SSF52833 8 104 4.35E-23 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS22500 ba4df3152ce19a9eac5416742c3ad356 232 Pfam PF00043 Glutathione S-transferase, C-terminal domain 153 220 2.3E-8 T 19-04-2016 IPR004046 Glutathione S-transferase, C-terminal ALIDE2_RS18610 0af626aaef699f30c73403b4a17df149 461 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 19-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 ALIDE2_RS18610 0af626aaef699f30c73403b4a17df149 461 Gene3D G3DSA:1.10.40.30 404 460 2.2E-31 T 19-04-2016 ALIDE2_RS18610 0af626aaef699f30c73403b4a17df149 461 SUPERFAMILY SSF48557 3 461 3.93E-155 T 19-04-2016 IPR008948 L-Aspartase-like GO:0003824 ALIDE2_RS18610 0af626aaef699f30c73403b4a17df149 461 Pfam PF10415 Fumarase C C-terminus 407 460 4.0E-25 T 19-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS18610 0af626aaef699f30c73403b4a17df149 461 PANTHER PTHR11444:SF1 1 461 1.2E-246 T 19-04-2016 ALIDE2_RS18610 0af626aaef699f30c73403b4a17df149 461 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 460 2.1E-230 T 19-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS18610 0af626aaef699f30c73403b4a17df149 461 Gene3D G3DSA:1.20.200.10 138 399 4.9E-103 T 19-04-2016 ALIDE2_RS18610 0af626aaef699f30c73403b4a17df149 461 PANTHER PTHR11444 1 461 1.2E-246 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS18610 0af626aaef699f30c73403b4a17df149 461 Gene3D G3DSA:1.10.275.10 2 137 7.4E-61 T 19-04-2016 IPR024083 Fumarase/histidase, N-terminal ALIDE2_RS18610 0af626aaef699f30c73403b4a17df149 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 90.617 T 19-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS18610 0af626aaef699f30c73403b4a17df149 461 Pfam PF00206 Lyase 11 341 6.3E-113 T 19-04-2016 IPR022761 Fumarate lyase, N-terminal ALIDE2_RS18610 0af626aaef699f30c73403b4a17df149 461 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 6.4E-34 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS18610 0af626aaef699f30c73403b4a17df149 461 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 6.4E-34 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS18610 0af626aaef699f30c73403b4a17df149 461 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 6.4E-34 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS18610 0af626aaef699f30c73403b4a17df149 461 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 6.4E-34 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS16505 d66287bc74a6c08cac7f45c22238ed04 334 SMART SM00778 37 74 3.1E-11 T 19-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- ALIDE2_RS16505 d66287bc74a6c08cac7f45c22238ed04 334 Pfam PF13362 Toprim domain 228 325 2.5E-14 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS16505 d66287bc74a6c08cac7f45c22238ed04 334 Gene3D G3DSA:3.90.580.10 35 101 2.0E-6 T 19-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ALIDE2_RS16505 d66287bc74a6c08cac7f45c22238ed04 334 Pfam PF08273 Zinc-binding domain of primase-helicase 38 72 1.2E-6 T 19-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- ALIDE2_RS16505 d66287bc74a6c08cac7f45c22238ed04 334 Gene3D G3DSA:3.40.1360.10 221 330 9.7E-5 T 19-04-2016 ALIDE2_RS16505 d66287bc74a6c08cac7f45c22238ed04 334 SUPERFAMILY SSF57783 17 102 8.16E-12 T 19-04-2016 ALIDE2_RS23540 a678abc0fb9c76e6dc3694e55bf8ca96 146 Gene3D G3DSA:3.30.230.10 1 128 8.0E-16 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALIDE2_RS23540 a678abc0fb9c76e6dc3694e55bf8ca96 146 Pfam PF00825 Ribonuclease P 2 121 2.1E-13 T 19-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ALIDE2_RS23540 a678abc0fb9c76e6dc3694e55bf8ca96 146 SUPERFAMILY SSF54211 2 123 4.8E-12 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS08840 aa334a521fd227dd9ed05075e74ad97b 227 SMART SM00862 145 222 1.8E-24 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS08840 aa334a521fd227dd9ed05075e74ad97b 227 PANTHER PTHR26402 1 225 1.9E-85 T 19-04-2016 ALIDE2_RS08840 aa334a521fd227dd9ed05075e74ad97b 227 Pfam PF00072 Response regulator receiver domain 3 113 6.4E-27 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS08840 aa334a521fd227dd9ed05075e74ad97b 227 SMART SM00448 1 112 1.7E-39 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS08840 aa334a521fd227dd9ed05075e74ad97b 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 222 9.9E-24 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS08840 aa334a521fd227dd9ed05075e74ad97b 227 SUPERFAMILY SSF52172 1 179 3.84E-40 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS08840 aa334a521fd227dd9ed05075e74ad97b 227 Gene3D G3DSA:3.40.50.2300 1 122 1.3E-38 T 19-04-2016 ALIDE2_RS08840 aa334a521fd227dd9ed05075e74ad97b 227 PANTHER PTHR26402:SF578 1 225 1.9E-85 T 19-04-2016 ALIDE2_RS08840 aa334a521fd227dd9ed05075e74ad97b 227 Gene3D G3DSA:1.10.10.10 126 224 8.5E-31 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 PANTHER PTHR32063:SF19 2 1039 0.0 T 19-04-2016 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 2.6E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 2.6E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 2.6E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 2.6E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.6E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1037 0.0 T 19-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 SUPERFAMILY SSF82714 185 268 3.4E-17 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 SUPERFAMILY SSF82866 293 505 6.93E-40 T 19-04-2016 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 Gene3D G3DSA:3.30.2090.10 722 810 8.4E-17 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 PANTHER PTHR32063 2 1039 0.0 T 19-04-2016 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 Gene3D G3DSA:3.30.70.1430 46 142 1.1E-23 T 19-04-2016 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 Gene3D G3DSA:1.10.3850.10 814 1038 1.5E-49 T 19-04-2016 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 Gene3D G3DSA:1.10.3850.10 274 506 7.6E-68 T 19-04-2016 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 SUPERFAMILY SSF82693 138 184 9.68E-20 T 19-04-2016 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 SUPERFAMILY SSF82693 270 327 9.68E-20 T 19-04-2016 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 SUPERFAMILY SSF82693 46 127 5.75E-20 T 19-04-2016 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 Pfam PF00873 AcrB/AcrD/AcrF family 6 1035 5.9E-231 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 SUPERFAMILY SSF82866 805 1038 1.44E-44 T 19-04-2016 ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 SUPERFAMILY SSF82714 722 806 7.06E-15 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS10960 3ecf605a6568423189422b8341262ab4 1039 Gene3D G3DSA:3.30.2090.10 185 268 6.7E-17 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS12800 b28f9bb51cd9012cffed5464cf02eb98 292 Gene3D G3DSA:3.40.190.10 91 173 1.3E-29 T 19-04-2016 ALIDE2_RS12800 b28f9bb51cd9012cffed5464cf02eb98 292 Gene3D G3DSA:1.10.10.10 3 83 1.3E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12800 b28f9bb51cd9012cffed5464cf02eb98 292 PANTHER PTHR30537:SF8 1 291 1.6E-85 T 19-04-2016 ALIDE2_RS12800 b28f9bb51cd9012cffed5464cf02eb98 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.2E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12800 b28f9bb51cd9012cffed5464cf02eb98 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.2E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12800 b28f9bb51cd9012cffed5464cf02eb98 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.2E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12800 b28f9bb51cd9012cffed5464cf02eb98 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.7E-22 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12800 b28f9bb51cd9012cffed5464cf02eb98 292 PANTHER PTHR30537 1 291 1.6E-85 T 19-04-2016 ALIDE2_RS12800 b28f9bb51cd9012cffed5464cf02eb98 292 SUPERFAMILY SSF53850 87 290 1.18E-36 T 19-04-2016 ALIDE2_RS12800 b28f9bb51cd9012cffed5464cf02eb98 292 Pfam PF03466 LysR substrate binding domain 87 289 2.0E-33 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS12800 b28f9bb51cd9012cffed5464cf02eb98 292 SUPERFAMILY SSF46785 5 110 2.32E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12800 b28f9bb51cd9012cffed5464cf02eb98 292 Gene3D G3DSA:3.40.190.10 174 257 3.6E-17 T 19-04-2016 ALIDE2_RS04265 99608d952f4c2bff37f8b39c6ebd1064 350 Gene3D G3DSA:3.40.718.10 5 349 3.8E-122 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS04265 99608d952f4c2bff37f8b39c6ebd1064 350 PANTHER PTHR30004 5 349 1.6E-126 T 19-04-2016 ALIDE2_RS04265 99608d952f4c2bff37f8b39c6ebd1064 350 SUPERFAMILY SSF53659 9 349 6.34E-99 T 19-04-2016 ALIDE2_RS04265 99608d952f4c2bff37f8b39c6ebd1064 350 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 10 349 2.1E-115 T 19-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 ALIDE2_RS04265 99608d952f4c2bff37f8b39c6ebd1064 350 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 7 349 34.159 T 19-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 ALIDE2_RS04265 99608d952f4c2bff37f8b39c6ebd1064 350 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 40 345 1.4E-99 T 19-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 ALIDE2_RS04265 99608d952f4c2bff37f8b39c6ebd1064 350 PANTHER PTHR30004:SF6 5 349 1.6E-126 T 19-04-2016 ALIDE2_RS00785 6b72157c46e44030720290a2bdb21999 402 SUPERFAMILY SSF53901 275 401 2.21E-43 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00785 6b72157c46e44030720290a2bdb21999 402 Pfam PF02803 Thiolase, C-terminal domain 275 401 5.7E-44 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS00785 6b72157c46e44030720290a2bdb21999 402 PANTHER PTHR18919 1 402 4.3E-154 T 19-04-2016 ALIDE2_RS00785 6b72157c46e44030720290a2bdb21999 402 Pfam PF00108 Thiolase, N-terminal domain 5 267 3.1E-70 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS00785 6b72157c46e44030720290a2bdb21999 402 Gene3D G3DSA:3.40.47.10 4 123 4.5E-59 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00785 6b72157c46e44030720290a2bdb21999 402 Gene3D G3DSA:3.40.47.10 199 279 4.5E-59 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00785 6b72157c46e44030720290a2bdb21999 402 PIRSF PIRSF000429 1 402 2.9E-132 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS00785 6b72157c46e44030720290a2bdb21999 402 PANTHER PTHR18919:SF69 1 402 4.3E-154 T 19-04-2016 ALIDE2_RS00785 6b72157c46e44030720290a2bdb21999 402 Gene3D G3DSA:3.40.47.10 161 198 3.8E-60 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00785 6b72157c46e44030720290a2bdb21999 402 Gene3D G3DSA:3.40.47.10 281 401 3.8E-60 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00785 6b72157c46e44030720290a2bdb21999 402 SUPERFAMILY SSF53901 4 274 3.64E-77 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00785 6b72157c46e44030720290a2bdb21999 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 400 2.8E-133 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS05195 a27ad0b96494d5f703d55e0dd0419604 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 1.5E-51 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS05195 a27ad0b96494d5f703d55e0dd0419604 390 SUPERFAMILY SSF47203 235 386 8.86E-57 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS05195 a27ad0b96494d5f703d55e0dd0419604 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 222 5.8E-22 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS05195 a27ad0b96494d5f703d55e0dd0419604 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 123 2.0E-25 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS05195 a27ad0b96494d5f703d55e0dd0419604 390 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS05195 a27ad0b96494d5f703d55e0dd0419604 390 Gene3D G3DSA:1.10.540.10 13 124 1.7E-30 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS05195 a27ad0b96494d5f703d55e0dd0419604 390 Gene3D G3DSA:1.20.140.10 224 386 8.4E-65 T 19-04-2016 ALIDE2_RS05195 a27ad0b96494d5f703d55e0dd0419604 390 Gene3D G3DSA:2.40.110.10 127 223 1.0E-32 T 19-04-2016 ALIDE2_RS05195 a27ad0b96494d5f703d55e0dd0419604 390 SUPERFAMILY SSF56645 13 246 9.69E-67 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS05195 a27ad0b96494d5f703d55e0dd0419604 390 PANTHER PTHR10909 6 385 4.9E-141 T 19-04-2016 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 Gene3D G3DSA:2.30.42.10 418 505 1.6E-18 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 Gene3D G3DSA:2.30.42.10 310 405 1.1E-27 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 SUPERFAMILY SSF50494 57 298 4.35E-64 T 19-04-2016 IPR009003 Peptidase S1, PA clan ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 PANTHER PTHR22939 7 80 5.7E-118 T 19-04-2016 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 PANTHER PTHR22939 117 417 5.7E-118 T 19-04-2016 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 Gene3D G3DSA:2.40.10.10 200 309 4.3E-43 T 19-04-2016 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 Gene3D G3DSA:2.40.10.10 122 199 7.7E-35 T 19-04-2016 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 Gene3D G3DSA:2.40.10.10 51 78 7.7E-35 T 19-04-2016 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 PRINTS PR00834 HtrA/DegQ protease family signature 144 156 3.7E-52 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 PRINTS PR00834 HtrA/DegQ protease family signature 205 229 3.7E-52 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 PRINTS PR00834 HtrA/DegQ protease family signature 261 278 3.7E-52 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 PRINTS PR00834 HtrA/DegQ protease family signature 347 359 3.7E-52 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 PRINTS PR00834 HtrA/DegQ protease family signature 165 185 3.7E-52 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 PRINTS PR00834 HtrA/DegQ protease family signature 239 256 3.7E-52 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 59 501 1.0E-143 T 19-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 SMART SM00228 307 389 8.2E-15 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 SMART SM00228 418 496 4.5E-9 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 SUPERFAMILY SSF50156 265 389 1.45E-24 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 Pfam PF13180 PDZ domain 308 398 2.9E-16 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 Pfam PF13180 PDZ domain 420 504 2.0E-6 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 SUPERFAMILY SSF50156 417 505 8.94E-16 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 Pfam PF13365 Trypsin-like peptidase domain 135 268 1.6E-35 T 19-04-2016 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 PANTHER PTHR22939:SF79 7 80 5.7E-118 T 19-04-2016 ALIDE2_RS19325 7d07d18e789897ae8dcee126637275ed 506 PANTHER PTHR22939:SF79 117 417 5.7E-118 T 19-04-2016 ALIDE2_RS02485 c2b0dd85b64c679b2f069ffb37dd4421 280 SUPERFAMILY SSF52540 17 257 1.89E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02485 c2b0dd85b64c679b2f069ffb37dd4421 280 Pfam PF00005 ABC transporter 35 185 4.2E-24 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS02485 c2b0dd85b64c679b2f069ffb37dd4421 280 SMART SM00382 44 242 6.0E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS02485 c2b0dd85b64c679b2f069ffb37dd4421 280 PANTHER PTHR24220:SF498 20 279 8.4E-114 T 19-04-2016 ALIDE2_RS02485 c2b0dd85b64c679b2f069ffb37dd4421 280 PANTHER PTHR24220 20 279 8.4E-114 T 19-04-2016 ALIDE2_RS02485 c2b0dd85b64c679b2f069ffb37dd4421 280 Gene3D G3DSA:3.40.50.300 16 255 2.7E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19415 708978cd4466624682d7cc01cc120e31 260 Gene3D G3DSA:3.90.226.10 2 201 1.4E-65 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS19415 708978cd4466624682d7cc01cc120e31 260 SUPERFAMILY SSF52096 2 259 1.99E-79 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS19415 708978cd4466624682d7cc01cc120e31 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS19415 708978cd4466624682d7cc01cc120e31 260 PANTHER PTHR11941 1 257 2.9E-85 T 19-04-2016 ALIDE2_RS19415 708978cd4466624682d7cc01cc120e31 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 260 2.8E-59 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS19415 708978cd4466624682d7cc01cc120e31 260 Gene3D G3DSA:1.10.12.10 203 260 1.9E-16 T 19-04-2016 IPR014748 Crontonase, C-terminal ALIDE2_RS17060 b9b8f886ef004413d3e54b417085d7f5 335 PIRSF PIRSF500210 1 335 2.6E-126 T 19-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 ALIDE2_RS17060 b9b8f886ef004413d3e54b417085d7f5 335 SUPERFAMILY SSF56655 3 332 1.34E-116 T 19-04-2016 ALIDE2_RS17060 b9b8f886ef004413d3e54b417085d7f5 335 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 334 46.825 T 19-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 ALIDE2_RS17060 b9b8f886ef004413d3e54b417085d7f5 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 308 333 4.2E-70 T 19-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 ALIDE2_RS17060 b9b8f886ef004413d3e54b417085d7f5 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 4.2E-70 T 19-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 ALIDE2_RS17060 b9b8f886ef004413d3e54b417085d7f5 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 180 203 4.2E-70 T 19-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 ALIDE2_RS17060 b9b8f886ef004413d3e54b417085d7f5 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 149 172 4.2E-70 T 19-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 ALIDE2_RS17060 b9b8f886ef004413d3e54b417085d7f5 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 206 233 4.2E-70 T 19-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 ALIDE2_RS17060 b9b8f886ef004413d3e54b417085d7f5 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 4.2E-70 T 19-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 ALIDE2_RS17060 b9b8f886ef004413d3e54b417085d7f5 335 Gene3D G3DSA:3.30.540.10 5 196 4.0E-75 T 19-04-2016 ALIDE2_RS17060 b9b8f886ef004413d3e54b417085d7f5 335 Gene3D G3DSA:3.40.190.80 197 333 5.6E-57 T 19-04-2016 ALIDE2_RS17060 b9b8f886ef004413d3e54b417085d7f5 335 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 194 3.1E-62 T 19-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 ALIDE2_RS17060 b9b8f886ef004413d3e54b417085d7f5 335 PANTHER PTHR11556 5 335 2.6E-155 T 19-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 ALIDE2_RS17060 b9b8f886ef004413d3e54b417085d7f5 335 PIRSF PIRSF000904 1 335 5.8E-124 T 19-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 ALIDE2_RS08130 4adda08b1907fd1c4dc0d488f5e7a427 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS08130 4adda08b1907fd1c4dc0d488f5e7a427 261 SUPERFAMILY SSF52096 3 260 1.23E-79 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS08130 4adda08b1907fd1c4dc0d488f5e7a427 261 PANTHER PTHR11941 3 258 2.2E-86 T 19-04-2016 ALIDE2_RS08130 4adda08b1907fd1c4dc0d488f5e7a427 261 Gene3D G3DSA:3.90.226.10 3 258 4.7E-82 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS08130 4adda08b1907fd1c4dc0d488f5e7a427 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 260 5.7E-60 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS02255 2f39f59be5e710780b6225b84c190008 240 SUPERFAMILY SSF51419 1 232 9.95E-71 T 19-04-2016 IPR029066 PLP-binding barrel ALIDE2_RS02255 2f39f59be5e710780b6225b84c190008 240 PIRSF PIRSF004848 1 239 4.9E-63 T 19-04-2016 IPR011078 Uncharacterised protein family UPF0001 ALIDE2_RS02255 2f39f59be5e710780b6225b84c190008 240 Pfam PF01168 Alanine racemase, N-terminal domain 7 234 6.2E-30 T 19-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS02255 2f39f59be5e710780b6225b84c190008 240 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 234 1.2E-67 T 19-04-2016 IPR011078 Uncharacterised protein family UPF0001 ALIDE2_RS02255 2f39f59be5e710780b6225b84c190008 240 Gene3D G3DSA:3.20.20.10 1 237 7.3E-84 T 19-04-2016 IPR029066 PLP-binding barrel ALIDE2_RS02255 2f39f59be5e710780b6225b84c190008 240 PANTHER PTHR10146 4 239 6.4E-83 T 19-04-2016 IPR011078 Uncharacterised protein family UPF0001 ALIDE2_RS22460 07831faa342f7e2030154b8d24e76630 351 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 173 4.4E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22460 07831faa342f7e2030154b8d24e76630 351 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 204 4.4E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22460 07831faa342f7e2030154b8d24e76630 351 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 123 4.4E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22460 07831faa342f7e2030154b8d24e76630 351 Pfam PF00106 short chain dehydrogenase 38 222 3.7E-45 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22460 07831faa342f7e2030154b8d24e76630 351 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 172 200 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS22460 07831faa342f7e2030154b8d24e76630 351 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 175 2.5E-20 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22460 07831faa342f7e2030154b8d24e76630 351 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 112 123 2.5E-20 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22460 07831faa342f7e2030154b8d24e76630 351 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 38 55 2.5E-20 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22460 07831faa342f7e2030154b8d24e76630 351 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 204 2.5E-20 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22460 07831faa342f7e2030154b8d24e76630 351 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 224 2.5E-20 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22460 07831faa342f7e2030154b8d24e76630 351 SUPERFAMILY SSF51735 37 259 2.86E-61 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22460 07831faa342f7e2030154b8d24e76630 351 Gene3D G3DSA:3.40.50.720 37 264 4.1E-61 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22460 07831faa342f7e2030154b8d24e76630 351 PANTHER PTHR24322 41 169 5.7E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22460 07831faa342f7e2030154b8d24e76630 351 PANTHER PTHR24322 185 222 5.7E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS23170 a07c8ad6a1840be57b53c8ab53926987 269 Gene3D G3DSA:1.10.10.10 17 91 1.6E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23170 a07c8ad6a1840be57b53c8ab53926987 269 Pfam PF09339 IclR helix-turn-helix domain 25 74 4.5E-16 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS23170 a07c8ad6a1840be57b53c8ab53926987 269 SUPERFAMILY SSF46785 25 95 3.75E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23170 a07c8ad6a1840be57b53c8ab53926987 269 Gene3D G3DSA:3.30.450.40 93 265 6.3E-35 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS23170 a07c8ad6a1840be57b53c8ab53926987 269 SMART SM00346 22 112 5.0E-24 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS23170 a07c8ad6a1840be57b53c8ab53926987 269 SUPERFAMILY SSF55781 80 267 1.11E-35 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS23170 a07c8ad6a1840be57b53c8ab53926987 269 Pfam PF01614 Bacterial transcriptional regulator 145 263 2.1E-10 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS23170 a07c8ad6a1840be57b53c8ab53926987 269 PANTHER PTHR30136 18 267 1.4E-77 T 19-04-2016 ALIDE2_RS23170 a07c8ad6a1840be57b53c8ab53926987 269 PANTHER PTHR30136:SF4 18 267 1.4E-77 T 19-04-2016 ALIDE2_RS21115 ca097bc3f53f713193113eb8f42e9953 342 Pfam PF01471 Putative peptidoglycan binding domain 58 113 2.6E-14 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS21115 ca097bc3f53f713193113eb8f42e9953 342 Pfam PF01471 Putative peptidoglycan binding domain 143 195 1.9E-8 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS21115 ca097bc3f53f713193113eb8f42e9953 342 SUPERFAMILY SSF47090 47 114 2.98E-16 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS21115 ca097bc3f53f713193113eb8f42e9953 342 Gene3D G3DSA:1.10.101.10 48 113 4.2E-17 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS21115 ca097bc3f53f713193113eb8f42e9953 342 Gene3D G3DSA:1.10.101.10 142 196 1.2E-10 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS21115 ca097bc3f53f713193113eb8f42e9953 342 SUPERFAMILY SSF141523 227 342 5.1E-16 T 19-04-2016 ALIDE2_RS21115 ca097bc3f53f713193113eb8f42e9953 342 Pfam PF03734 L,D-transpeptidase catalytic domain 228 341 7.2E-9 T 19-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 ALIDE2_RS21115 ca097bc3f53f713193113eb8f42e9953 342 SUPERFAMILY SSF47090 141 196 1.24E-12 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS21115 ca097bc3f53f713193113eb8f42e9953 342 Gene3D G3DSA:2.40.440.10 226 342 8.3E-13 T 19-04-2016 ALIDE2_RS05105 45e72a50af5da93a2b08b8c65cbff3a3 383 Gene3D G3DSA:3.20.20.70 9 381 1.2E-125 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS05105 45e72a50af5da93a2b08b8c65cbff3a3 383 PIRSF PIRSF000138 3 382 1.6E-119 T 19-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 ALIDE2_RS05105 45e72a50af5da93a2b08b8c65cbff3a3 383 SUPERFAMILY SSF51395 227 379 1.65E-88 T 19-04-2016 ALIDE2_RS05105 45e72a50af5da93a2b08b8c65cbff3a3 383 SUPERFAMILY SSF51395 10 197 1.65E-88 T 19-04-2016 ALIDE2_RS05105 45e72a50af5da93a2b08b8c65cbff3a3 383 PANTHER PTHR10578 10 383 9.7E-137 T 19-04-2016 ALIDE2_RS05105 45e72a50af5da93a2b08b8c65cbff3a3 383 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 277 283 - T 19-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 ALIDE2_RS05105 45e72a50af5da93a2b08b8c65cbff3a3 383 Pfam PF01070 FMN-dependent dehydrogenase 16 380 9.4E-125 T 19-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 ALIDE2_RS05105 45e72a50af5da93a2b08b8c65cbff3a3 383 PANTHER PTHR10578:SF65 10 383 9.7E-137 T 19-04-2016 ALIDE2_RS15845 7be6e57ff1f16000ff4d49a4f6e892e8 331 PANTHER PTHR30518:SF2 2 330 3.0E-87 T 19-04-2016 ALIDE2_RS15845 7be6e57ff1f16000ff4d49a4f6e892e8 331 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 6 329 1.2E-80 T 19-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like ALIDE2_RS15845 7be6e57ff1f16000ff4d49a4f6e892e8 331 PANTHER PTHR30518 2 330 3.0E-87 T 19-04-2016 ALIDE2_RS15845 7be6e57ff1f16000ff4d49a4f6e892e8 331 Gene3D G3DSA:3.30.160.60 301 330 1.5E-16 T 19-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 ALIDE2_RS15845 7be6e57ff1f16000ff4d49a4f6e892e8 331 Pfam PF02618 YceG-like family 42 326 9.3E-81 T 19-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like ALIDE2_RS11470 0d1a4a80bb792df7aa9f20039e4c4a56 269 Gene3D G3DSA:3.20.20.150 1 267 3.2E-89 T 19-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain ALIDE2_RS11470 0d1a4a80bb792df7aa9f20039e4c4a56 269 PANTHER PTHR12110:SF12 1 265 1.3E-93 T 19-04-2016 ALIDE2_RS11470 0d1a4a80bb792df7aa9f20039e4c4a56 269 PANTHER PTHR12110 1 265 1.3E-93 T 19-04-2016 ALIDE2_RS11470 0d1a4a80bb792df7aa9f20039e4c4a56 269 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 3.1E-33 T 19-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain ALIDE2_RS11470 0d1a4a80bb792df7aa9f20039e4c4a56 269 SUPERFAMILY SSF51658 1 268 7.46E-79 T 19-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain ALIDE2_RS11470 0d1a4a80bb792df7aa9f20039e4c4a56 269 PIRSF PIRSF006241 1 268 7.4E-87 T 19-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 ALIDE2_RS07315 a4400ee3f5d3015f33e61a4ec1345e45 202 Gene3D G3DSA:3.90.226.10 11 200 1.9E-88 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS07315 a4400ee3f5d3015f33e61a4ec1345e45 202 SUPERFAMILY SSF52096 19 200 3.4E-74 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS07315 a4400ee3f5d3015f33e61a4ec1345e45 202 PRINTS PR00127 Clp protease catalytic subunit P signature 27 42 9.1E-51 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ALIDE2_RS07315 a4400ee3f5d3015f33e61a4ec1345e45 202 PRINTS PR00127 Clp protease catalytic subunit P signature 67 87 9.1E-51 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ALIDE2_RS07315 a4400ee3f5d3015f33e61a4ec1345e45 202 PRINTS PR00127 Clp protease catalytic subunit P signature 176 195 9.1E-51 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ALIDE2_RS07315 a4400ee3f5d3015f33e61a4ec1345e45 202 PRINTS PR00127 Clp protease catalytic subunit P signature 98 115 9.1E-51 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ALIDE2_RS07315 a4400ee3f5d3015f33e61a4ec1345e45 202 PRINTS PR00127 Clp protease catalytic subunit P signature 119 138 9.1E-51 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ALIDE2_RS07315 a4400ee3f5d3015f33e61a4ec1345e45 202 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 10 200 2.7E-105 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ALIDE2_RS07315 a4400ee3f5d3015f33e61a4ec1345e45 202 PANTHER PTHR10381:SF22 11 202 1.2E-133 T 19-04-2016 ALIDE2_RS07315 a4400ee3f5d3015f33e61a4ec1345e45 202 Pfam PF00574 Clp protease 21 200 1.2E-87 T 19-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ALIDE2_RS07315 a4400ee3f5d3015f33e61a4ec1345e45 202 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 11 201 44.11 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ALIDE2_RS07315 a4400ee3f5d3015f33e61a4ec1345e45 202 PANTHER PTHR10381 11 202 1.2E-133 T 19-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 SMART SM00304 192 245 4.6E-8 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 Pfam PF00672 HAMP domain 174 241 6.8E-13 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 471 2.0E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 2.0E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 2.0E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 SMART SM00387 358 474 1.2E-37 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 SUPERFAMILY SSF158472 196 242 1.7E-6 T 19-04-2016 ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 Gene3D G3DSA:3.30.565.10 299 473 1.3E-45 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 SUPERFAMILY SSF55874 303 472 3.54E-47 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 PANTHER PTHR24423 2 16 2.4E-82 T 19-04-2016 ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 PANTHER PTHR24423 186 474 2.4E-82 T 19-04-2016 ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 473 3.3E-22 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 SMART SM00388 246 312 3.1E-15 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 Gene3D G3DSA:1.10.287.130 238 298 4.6E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 311 3.5E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS08845 199c111c6c78af753d8669dff79e6e6c 484 SUPERFAMILY SSF47384 229 311 2.16E-16 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS09170 5d9c7361b8b3969f56baff342bf901b3 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 120 6.3E-19 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS09170 5d9c7361b8b3969f56baff342bf901b3 384 PANTHER PTHR10909 7 384 1.5E-124 T 19-04-2016 ALIDE2_RS09170 5d9c7361b8b3969f56baff342bf901b3 384 PANTHER PTHR10909:SF229 7 384 1.5E-124 T 19-04-2016 ALIDE2_RS09170 5d9c7361b8b3969f56baff342bf901b3 384 SUPERFAMILY SSF47203 230 381 2.9E-17 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS09170 5d9c7361b8b3969f56baff342bf901b3 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 216 9.1E-21 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS09170 5d9c7361b8b3969f56baff342bf901b3 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 380 1.6E-15 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS09170 5d9c7361b8b3969f56baff342bf901b3 384 Gene3D G3DSA:1.20.140.10 220 384 1.3E-25 T 19-04-2016 ALIDE2_RS09170 5d9c7361b8b3969f56baff342bf901b3 384 Gene3D G3DSA:2.40.110.10 123 219 3.3E-33 T 19-04-2016 ALIDE2_RS09170 5d9c7361b8b3969f56baff342bf901b3 384 Gene3D G3DSA:1.10.540.10 11 122 2.3E-21 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS09170 5d9c7361b8b3969f56baff342bf901b3 384 SUPERFAMILY SSF56645 12 241 1.44E-67 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS01195 245cd774d8af4b9d61527d75d378e38b 474 Pfam PF01425 Amidase 26 454 6.3E-95 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS01195 245cd774d8af4b9d61527d75d378e38b 474 SUPERFAMILY SSF75304 4 463 1.83E-125 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS01195 245cd774d8af4b9d61527d75d378e38b 474 Gene3D G3DSA:3.90.1300.10 4 468 1.2E-124 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS01195 245cd774d8af4b9d61527d75d378e38b 474 PANTHER PTHR11895 4 471 3.8E-124 T 19-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 10 138 5.0E-41 T 19-04-2016 IPR010523 Activator of aromatic catabolism ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 548 568 2.0E-8 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 531 548 2.0E-8 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 SUPERFAMILY SSF111126 106 182 4.03E-11 T 19-04-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 SUPERFAMILY SSF111126 41 73 4.03E-11 T 19-04-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 Gene3D G3DSA:1.10.8.60 413 484 1.8E-22 T 19-04-2016 ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 Pfam PF06505 Activator of aromatic catabolism 12 112 9.0E-37 T 19-04-2016 IPR010523 Activator of aromatic catabolism ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 264 277 - T 19-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 Pfam PF00158 Sigma-54 interaction domain 240 406 6.8E-69 T 19-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 Pfam PF02830 V4R domain 124 185 1.5E-17 T 19-04-2016 IPR004096 4-vinyl reductase, 4VR ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 SMART SM00989 123 185 2.9E-23 T 19-04-2016 IPR004096 4-vinyl reductase, 4VR ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 PANTHER PTHR32071 234 564 1.6E-140 T 19-04-2016 ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 SUPERFAMILY SSF46689 453 564 4.12E-8 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 SMART SM00382 260 403 7.7E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 Gene3D G3DSA:1.10.10.60 520 564 7.9E-11 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 Gene3D G3DSA:3.40.50.300 239 412 1.1E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 SUPERFAMILY SSF52540 240 473 1.52E-69 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 Gene3D G3DSA:3.30.1380.20 14 189 8.1E-19 T 19-04-2016 ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 326 341 - T 19-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ALIDE2_RS01330 9eaf5eb3f780c640ba9bcc7fc6ddd92f 568 Pfam PF02954 Bacterial regulatory protein, Fis family 527 564 7.9E-13 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS00685 a213edbd9c2079c3dde2d903e98366f8 369 Pfam PF02515 CoA-transferase family III 4 333 1.8E-77 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS00685 a213edbd9c2079c3dde2d903e98366f8 369 Gene3D G3DSA:3.30.1540.10 215 289 4.3E-9 T 19-04-2016 ALIDE2_RS00685 a213edbd9c2079c3dde2d903e98366f8 369 Gene3D G3DSA:3.40.50.10540 290 361 1.8E-83 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00685 a213edbd9c2079c3dde2d903e98366f8 369 Gene3D G3DSA:3.40.50.10540 2 203 1.8E-83 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00685 a213edbd9c2079c3dde2d903e98366f8 369 SUPERFAMILY SSF89796 2 358 5.36E-101 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00685 a213edbd9c2079c3dde2d903e98366f8 369 PANTHER PTHR24023:SF545 29 362 2.1E-75 T 19-04-2016 ALIDE2_RS00685 a213edbd9c2079c3dde2d903e98366f8 369 PANTHER PTHR24023 29 362 2.1E-75 T 19-04-2016 ALIDE2_RS00160 f18f923bbd2d6dcc386a65279bfc6835 395 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 391 1.4E-24 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00160 f18f923bbd2d6dcc386a65279bfc6835 395 Gene3D G3DSA:2.40.110.10 125 221 1.5E-38 T 19-04-2016 ALIDE2_RS00160 f18f923bbd2d6dcc386a65279bfc6835 395 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 220 3.5E-23 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS00160 f18f923bbd2d6dcc386a65279bfc6835 395 SUPERFAMILY SSF47203 232 393 2.9E-18 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00160 f18f923bbd2d6dcc386a65279bfc6835 395 Gene3D G3DSA:1.10.540.10 5 120 2.5E-24 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00160 f18f923bbd2d6dcc386a65279bfc6835 395 SUPERFAMILY SSF56645 5 240 1.23E-71 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS00160 f18f923bbd2d6dcc386a65279bfc6835 395 PANTHER PTHR10909 1 395 1.3E-130 T 19-04-2016 ALIDE2_RS00160 f18f923bbd2d6dcc386a65279bfc6835 395 Gene3D G3DSA:1.20.140.10 222 395 2.1E-31 T 19-04-2016 ALIDE2_RS00160 f18f923bbd2d6dcc386a65279bfc6835 395 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 120 5.2E-19 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00160 f18f923bbd2d6dcc386a65279bfc6835 395 PANTHER PTHR10909:SF229 1 395 1.3E-130 T 19-04-2016 ALIDE2_RS20970 fc602a29df68c76c6d80853eaf6a0c0d 426 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 408 3.3E-104 T 19-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G ALIDE2_RS20970 fc602a29df68c76c6d80853eaf6a0c0d 426 Pfam PF00460 Flagella basal body rod protein 3 33 4.1E-10 T 19-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ALIDE2_RS20970 fc602a29df68c76c6d80853eaf6a0c0d 426 Pfam PF07559 Flagellar basal body protein FlaE 188 307 3.4E-23 T 19-04-2016 IPR011491 Flagellar hook protein FlgE ALIDE2_RS20970 fc602a29df68c76c6d80853eaf6a0c0d 426 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 347 425 6.3E-21 T 19-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ALIDE2_RS20970 fc602a29df68c76c6d80853eaf6a0c0d 426 PANTHER PTHR30435:SF1 304 426 1.8E-94 T 19-04-2016 ALIDE2_RS20970 fc602a29df68c76c6d80853eaf6a0c0d 426 PANTHER PTHR30435:SF1 1 124 1.8E-94 T 19-04-2016 ALIDE2_RS20970 fc602a29df68c76c6d80853eaf6a0c0d 426 PANTHER PTHR30435 304 426 1.8E-94 T 19-04-2016 ALIDE2_RS20970 fc602a29df68c76c6d80853eaf6a0c0d 426 PANTHER PTHR30435 1 124 1.8E-94 T 19-04-2016 ALIDE2_RS20970 fc602a29df68c76c6d80853eaf6a0c0d 426 SUPERFAMILY SSF117143 79 387 6.67E-80 T 19-04-2016 ALIDE2_RS06700 729225a902a5c3f6d9df574ad32985f5 225 Pfam PF07729 FCD domain 77 199 2.7E-21 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS06700 729225a902a5c3f6d9df574ad32985f5 225 SUPERFAMILY SSF48008 72 203 1.05E-25 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS06700 729225a902a5c3f6d9df574ad32985f5 225 SUPERFAMILY SSF46785 6 71 3.17E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06700 729225a902a5c3f6d9df574ad32985f5 225 Gene3D G3DSA:1.20.120.530 70 205 5.5E-31 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS06700 729225a902a5c3f6d9df574ad32985f5 225 Gene3D G3DSA:1.10.10.10 3 68 5.1E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06700 729225a902a5c3f6d9df574ad32985f5 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 67 4.6E-15 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS06700 729225a902a5c3f6d9df574ad32985f5 225 PANTHER PTHR11751 9 93 1.8E-18 T 19-04-2016 ALIDE2_RS06700 729225a902a5c3f6d9df574ad32985f5 225 SMART SM00345 9 67 5.5E-14 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS06700 729225a902a5c3f6d9df574ad32985f5 225 SMART SM00895 77 200 1.4E-14 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS04160 290807d6d82b26c18ff74a3681e43e54 247 PANTHER PTHR21235:SF15 1 243 1.2E-98 T 19-04-2016 ALIDE2_RS04160 290807d6d82b26c18ff74a3681e43e54 247 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 1.1E-77 T 19-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 ALIDE2_RS04160 290807d6d82b26c18ff74a3681e43e54 247 SUPERFAMILY SSF51366 1 238 8.63E-76 T 19-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 ALIDE2_RS04160 290807d6d82b26c18ff74a3681e43e54 247 PANTHER PTHR21235 1 243 1.2E-98 T 19-04-2016 ALIDE2_RS04160 290807d6d82b26c18ff74a3681e43e54 247 Pfam PF00977 Histidine biosynthesis protein 3 232 5.2E-80 T 19-04-2016 IPR006062 Histidine biosynthesis GO:0000105 ALIDE2_RS04160 290807d6d82b26c18ff74a3681e43e54 247 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 36.386 T 19-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 ALIDE2_RS04160 290807d6d82b26c18ff74a3681e43e54 247 Gene3D G3DSA:3.20.20.70 1 239 5.2E-90 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS21550 7db8ef161f60270b165ef1d927b19d33 310 Pfam PF00589 Phage integrase family 130 290 4.0E-17 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS21550 7db8ef161f60270b165ef1d927b19d33 310 Gene3D G3DSA:1.10.443.10 108 294 1.6E-30 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS21550 7db8ef161f60270b165ef1d927b19d33 310 SUPERFAMILY SSF56349 7 296 2.59E-34 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS21550 7db8ef161f60270b165ef1d927b19d33 310 PANTHER PTHR30349:SF20 28 309 2.5E-16 T 19-04-2016 ALIDE2_RS21550 7db8ef161f60270b165ef1d927b19d33 310 PANTHER PTHR30349 28 309 2.5E-16 T 19-04-2016 ALIDE2_RS16785 5a42173b155f909acb734033ed24dcd0 99 Pfam PF13276 HTH-like domain 1 36 1.4E-9 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS16785 5a42173b155f909acb734033ed24dcd0 99 Pfam PF00665 Integrase core domain 62 99 1.9E-7 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS16785 5a42173b155f909acb734033ed24dcd0 99 Gene3D G3DSA:3.30.420.10 55 98 1.4E-9 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS16785 5a42173b155f909acb734033ed24dcd0 99 SUPERFAMILY SSF53098 54 99 2.47E-11 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS16785 5a42173b155f909acb734033ed24dcd0 99 PANTHER PTHR32552 1 99 1.7E-25 T 19-04-2016 ALIDE2_RS06290 056dba587eab0c5627a83df9dcbd111d 326 Gene3D G3DSA:3.40.47.10 2 168 1.0E-66 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS06290 056dba587eab0c5627a83df9dcbd111d 326 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 326 69.688 T 19-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 ALIDE2_RS06290 056dba587eab0c5627a83df9dcbd111d 326 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 326 8.9E-121 T 19-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 ALIDE2_RS06290 056dba587eab0c5627a83df9dcbd111d 326 PANTHER PTHR18919 33 326 6.2E-129 T 19-04-2016 ALIDE2_RS06290 056dba587eab0c5627a83df9dcbd111d 326 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 114 191 8.8E-34 T 19-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 ALIDE2_RS06290 056dba587eab0c5627a83df9dcbd111d 326 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 237 325 8.9E-37 T 19-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 ALIDE2_RS06290 056dba587eab0c5627a83df9dcbd111d 326 SUPERFAMILY SSF53901 4 325 4.62E-75 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS06290 056dba587eab0c5627a83df9dcbd111d 326 PANTHER PTHR18919:SF109 33 326 6.2E-129 T 19-04-2016 ALIDE2_RS06290 056dba587eab0c5627a83df9dcbd111d 326 Gene3D G3DSA:3.40.47.10 169 325 1.9E-53 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS23025 ca97ed2ee3729e951dcaf350e63a8edb 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 137 1.3E-14 T 19-04-2016 IPR003736 Phenylacetic acid degradation-related domain ALIDE2_RS23025 ca97ed2ee3729e951dcaf350e63a8edb 144 SUPERFAMILY SSF54637 20 141 2.86E-30 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS23025 ca97ed2ee3729e951dcaf350e63a8edb 144 Pfam PF03061 Thioesterase superfamily 57 132 5.6E-13 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS23025 ca97ed2ee3729e951dcaf350e63a8edb 144 Gene3D G3DSA:3.10.129.10 24 140 1.7E-30 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS23025 ca97ed2ee3729e951dcaf350e63a8edb 144 PANTHER PTHR12418 24 138 3.0E-22 T 19-04-2016 ALIDE2_RS23345 04db39a2d1df9d34010280e494c95801 814 Gene3D G3DSA:2.60.450.10 73 222 2.0E-11 T 19-04-2016 ALIDE2_RS23345 04db39a2d1df9d34010280e494c95801 814 PANTHER PTHR30189 1 757 5.3E-61 T 19-04-2016 ALIDE2_RS23345 04db39a2d1df9d34010280e494c95801 814 Pfam PF04453 Organic solvent tolerance protein 321 706 4.7E-87 T 19-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 ALIDE2_RS23345 04db39a2d1df9d34010280e494c95801 814 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 28 779 18.83 T 19-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 ALIDE2_RS16440 31c9a1543bbb40022d83e1e30e9be1cb 822 Gene3D G3DSA:3.40.50.300 276 299 5.6E-16 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16440 31c9a1543bbb40022d83e1e30e9be1cb 822 Gene3D G3DSA:3.40.50.300 1 203 5.6E-16 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16440 31c9a1543bbb40022d83e1e30e9be1cb 822 Gene3D G3DSA:3.40.50.300 707 810 5.6E-16 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16440 31c9a1543bbb40022d83e1e30e9be1cb 822 SUPERFAMILY SSF52540 666 777 1.77E-15 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16440 31c9a1543bbb40022d83e1e30e9be1cb 822 SUPERFAMILY SSF52540 305 394 1.77E-15 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16440 31c9a1543bbb40022d83e1e30e9be1cb 822 SUPERFAMILY SSF52540 1 189 1.77E-15 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08125 544bdf016bf8ce8a19dcd734b5ee2803 406 PANTHER PTHR30483:SF17 1 405 3.7E-210 T 19-04-2016 ALIDE2_RS08125 544bdf016bf8ce8a19dcd734b5ee2803 406 Gene3D G3DSA:3.40.50.2300 304 357 4.3E-24 T 19-04-2016 ALIDE2_RS08125 544bdf016bf8ce8a19dcd734b5ee2803 406 Gene3D G3DSA:3.40.50.2300 27 154 4.3E-24 T 19-04-2016 ALIDE2_RS08125 544bdf016bf8ce8a19dcd734b5ee2803 406 SUPERFAMILY SSF53822 30 403 4.71E-83 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS08125 544bdf016bf8ce8a19dcd734b5ee2803 406 Pfam PF13458 Periplasmic binding protein 30 368 2.1E-78 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS08125 544bdf016bf8ce8a19dcd734b5ee2803 406 Gene3D G3DSA:3.40.50.2300 161 303 1.9E-14 T 19-04-2016 ALIDE2_RS08125 544bdf016bf8ce8a19dcd734b5ee2803 406 PANTHER PTHR30483 1 405 3.7E-210 T 19-04-2016 ALIDE2_RS00430 7180b70fed0a739e8867ee6b7bd59327 341 Gene3D G3DSA:1.10.540.10 5 85 1.5E-6 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00430 7180b70fed0a739e8867ee6b7bd59327 341 PANTHER PTHR10909:SF145 189 340 9.2E-18 T 19-04-2016 ALIDE2_RS00430 7180b70fed0a739e8867ee6b7bd59327 341 SUPERFAMILY SSF56645 4 89 8.32E-8 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS00430 7180b70fed0a739e8867ee6b7bd59327 341 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 92 1.0E-5 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00430 7180b70fed0a739e8867ee6b7bd59327 341 PANTHER PTHR10909 189 340 9.2E-18 T 19-04-2016 ALIDE2_RS00430 7180b70fed0a739e8867ee6b7bd59327 341 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 188 310 5.7E-19 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00430 7180b70fed0a739e8867ee6b7bd59327 341 Gene3D G3DSA:1.20.140.10 190 320 1.4E-25 T 19-04-2016 ALIDE2_RS00430 7180b70fed0a739e8867ee6b7bd59327 341 SUPERFAMILY SSF47203 188 322 2.58E-29 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS23480 2f232fa9d6440becf04215c8c3e18337 345 SUPERFAMILY SSF56266 13 333 4.97E-98 T 19-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 ALIDE2_RS23480 2f232fa9d6440becf04215c8c3e18337 345 PANTHER PTHR36512:SF1 1 336 4.8E-66 T 19-04-2016 ALIDE2_RS23480 2f232fa9d6440becf04215c8c3e18337 345 Gene3D G3DSA:3.60.70.12 8 338 1.6E-122 T 19-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 ALIDE2_RS23480 2f232fa9d6440becf04215c8c3e18337 345 PANTHER PTHR36512 1 336 4.8E-66 T 19-04-2016 ALIDE2_RS23480 2f232fa9d6440becf04215c8c3e18337 345 Pfam PF03576 Peptidase family S58 17 332 4.7E-109 T 19-04-2016 IPR005321 Peptidase S58, DmpA ALIDE2_RS20390 6184e55bbe4915dcf5536d1fa4397b11 376 PANTHER PTHR10909 1 354 6.1E-67 T 19-04-2016 ALIDE2_RS20390 6184e55bbe4915dcf5536d1fa4397b11 376 Gene3D G3DSA:2.40.110.10 120 215 5.4E-19 T 19-04-2016 ALIDE2_RS20390 6184e55bbe4915dcf5536d1fa4397b11 376 SUPERFAMILY SSF56645 1 225 4.58E-40 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS20390 6184e55bbe4915dcf5536d1fa4397b11 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 212 1.4E-12 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS20390 6184e55bbe4915dcf5536d1fa4397b11 376 Gene3D G3DSA:1.20.140.10 216 354 2.9E-35 T 19-04-2016 ALIDE2_RS20390 6184e55bbe4915dcf5536d1fa4397b11 376 SUPERFAMILY SSF47203 226 370 6.93E-35 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS20390 6184e55bbe4915dcf5536d1fa4397b11 376 PANTHER PTHR10909:SF145 1 354 6.1E-67 T 19-04-2016 ALIDE2_RS20390 6184e55bbe4915dcf5536d1fa4397b11 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 226 352 4.0E-24 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS20390 6184e55bbe4915dcf5536d1fa4397b11 376 Gene3D G3DSA:1.10.540.10 1 115 6.5E-12 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS20390 6184e55bbe4915dcf5536d1fa4397b11 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 108 1.1E-8 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS06015 e36ee863bf37c9b1e241908b58b786c5 212 Gene3D G3DSA:1.10.340.30 23 122 2.1E-33 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 ALIDE2_RS06015 e36ee863bf37c9b1e241908b58b786c5 212 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.6E-9 T 19-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 ALIDE2_RS06015 e36ee863bf37c9b1e241908b58b786c5 212 PANTHER PTHR10359 10 209 4.7E-83 T 19-04-2016 ALIDE2_RS06015 e36ee863bf37c9b1e241908b58b786c5 212 SMART SM00478 38 185 1.2E-53 T 19-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 ALIDE2_RS06015 e36ee863bf37c9b1e241908b58b786c5 212 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 19-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 ALIDE2_RS06015 e36ee863bf37c9b1e241908b58b786c5 212 PANTHER PTHR10359:SF18 10 209 4.7E-83 T 19-04-2016 ALIDE2_RS06015 e36ee863bf37c9b1e241908b58b786c5 212 TIGRFAM TIGR01083 nth: endonuclease III 9 194 8.2E-80 T 19-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 ALIDE2_RS06015 e36ee863bf37c9b1e241908b58b786c5 212 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 168 1.8E-17 T 19-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 ALIDE2_RS06015 e36ee863bf37c9b1e241908b58b786c5 212 Gene3D G3DSA:1.10.1670.10 123 206 2.2E-33 T 19-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal ALIDE2_RS06015 e36ee863bf37c9b1e241908b58b786c5 212 SUPERFAMILY SSF48150 2 208 7.38E-70 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 ALIDE2_RS06015 e36ee863bf37c9b1e241908b58b786c5 212 SMART SM00525 186 206 0.0041 T 19-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 ALIDE2_RS06015 e36ee863bf37c9b1e241908b58b786c5 212 Hamap MF_00942 Endonuclease III [nth]. 1 209 35.969 T 19-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 ALIDE2_RS06015 e36ee863bf37c9b1e241908b58b786c5 212 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.5E-4 T 19-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 ALIDE2_RS06015 e36ee863bf37c9b1e241908b58b786c5 212 PIRSF PIRSF001435 3 210 1.1E-45 T 19-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 ALIDE2_RS06015 e36ee863bf37c9b1e241908b58b786c5 212 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 19-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 63 74 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 6 601 49.334 T 19-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 379 580 8.3E-43 T 19-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 SUPERFAMILY SSF52374 56 384 3.38E-94 T 19-04-2016 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 Gene3D G3DSA:1.10.1160.10 302 377 4.0E-36 T 19-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 PANTHER PTHR11451:SF29 306 603 3.2E-186 T 19-04-2016 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 PANTHER PTHR11451:SF29 56 281 3.2E-186 T 19-04-2016 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 56 375 7.1E-101 T 19-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 Gene3D G3DSA:2.40.240.10 512 599 9.1E-30 T 19-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 SUPERFAMILY SSF50715 379 600 2.25E-58 T 19-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 Gene3D G3DSA:3.40.50.620 246 301 7.3E-42 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 Gene3D G3DSA:3.40.50.620 56 125 7.3E-42 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 57 603 7.2E-195 T 19-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 PANTHER PTHR11451 306 603 3.2E-186 T 19-04-2016 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 PANTHER PTHR11451 56 281 3.2E-186 T 19-04-2016 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 Gene3D G3DSA:2.40.240.10 387 511 1.2E-36 T 19-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 Gene3D G3DSA:3.90.800.10 135 243 6.7E-41 T 19-04-2016 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 72 1.0E-10 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 PRINTS PR00987 Glutamyl-tRNA synthetase signature 89 102 1.0E-10 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 PRINTS PR00987 Glutamyl-tRNA synthetase signature 244 254 1.0E-10 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS11375 b0306e49342aeb0ba79b565a702201f8 603 PRINTS PR00987 Glutamyl-tRNA synthetase signature 74 85 1.0E-10 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS15030 688014a4285e91afc91c8c12452b7e95 365 Gene3D G3DSA:3.40.50.300 44 183 9.1E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15030 688014a4285e91afc91c8c12452b7e95 365 PANTHER PTHR12169 4 358 4.1E-149 T 19-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 ALIDE2_RS15030 688014a4285e91afc91c8c12452b7e95 365 SUPERFAMILY SSF52540 43 182 2.88E-16 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15030 688014a4285e91afc91c8c12452b7e95 365 Pfam PF03969 AFG1-like ATPase 3 354 1.3E-123 T 19-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 ALIDE2_RS15030 688014a4285e91afc91c8c12452b7e95 365 PANTHER PTHR12169:SF11 4 358 4.1E-149 T 19-04-2016 ALIDE2_RS15455 d37205b38be0d91156780c223b8c003f 413 Gene3D G3DSA:1.20.140.10 245 410 2.5E-49 T 19-04-2016 ALIDE2_RS15455 d37205b38be0d91156780c223b8c003f 413 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 137 4.9E-15 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS15455 d37205b38be0d91156780c223b8c003f 413 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 142 243 1.5E-20 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS15455 d37205b38be0d91156780c223b8c003f 413 SUPERFAMILY SSF47203 253 409 1.77E-46 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS15455 d37205b38be0d91156780c223b8c003f 413 PANTHER PTHR10909:SF221 4 406 2.6E-226 T 19-04-2016 ALIDE2_RS15455 d37205b38be0d91156780c223b8c003f 413 Gene3D G3DSA:1.10.540.10 1 140 5.2E-34 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS15455 d37205b38be0d91156780c223b8c003f 413 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 255 404 1.3E-37 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS15455 d37205b38be0d91156780c223b8c003f 413 PANTHER PTHR10909 4 406 2.6E-226 T 19-04-2016 ALIDE2_RS15455 d37205b38be0d91156780c223b8c003f 413 SUPERFAMILY SSF56645 1 268 7.07E-67 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS15455 d37205b38be0d91156780c223b8c003f 413 Gene3D G3DSA:2.40.110.10 141 244 2.6E-41 T 19-04-2016 ALIDE2_RS04770 afece921e9d52206fcbbb5d4adc252d1 334 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 4 73 1.5E-6 T 19-04-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 ALIDE2_RS04770 afece921e9d52206fcbbb5d4adc252d1 334 SUPERFAMILY SSF55781 71 332 5.89E-62 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS04770 afece921e9d52206fcbbb5d4adc252d1 334 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 329 1.2E-92 T 19-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 ALIDE2_RS04770 afece921e9d52206fcbbb5d4adc252d1 334 SUPERFAMILY SSF46785 1 83 4.01E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS04770 afece921e9d52206fcbbb5d4adc252d1 334 Gene3D G3DSA:3.30.450.40 169 332 5.3E-40 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS04770 afece921e9d52206fcbbb5d4adc252d1 334 PIRSF PIRSF005485 1 334 1.9E-107 T 19-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 ALIDE2_RS04770 afece921e9d52206fcbbb5d4adc252d1 334 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 323 27.874 T 19-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 ALIDE2_RS04770 afece921e9d52206fcbbb5d4adc252d1 334 Pfam PF01628 HrcA protein C terminal domain 97 316 3.9E-58 T 19-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 ALIDE2_RS04770 afece921e9d52206fcbbb5d4adc252d1 334 PANTHER PTHR34824 1 331 1.6E-95 T 19-04-2016 ALIDE2_RS04770 afece921e9d52206fcbbb5d4adc252d1 334 Gene3D G3DSA:1.10.10.10 1 83 6.5E-37 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS19150 65408be453cda31611139c1fc79c4d83 417 PANTHER PTHR23502 15 417 6.5E-63 T 19-04-2016 ALIDE2_RS19150 65408be453cda31611139c1fc79c4d83 417 Pfam PF07690 Major Facilitator Superfamily 21 362 1.2E-30 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS19150 65408be453cda31611139c1fc79c4d83 417 SUPERFAMILY SSF103473 15 397 7.85E-50 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS19150 65408be453cda31611139c1fc79c4d83 417 PANTHER PTHR23502:SF19 15 417 6.5E-63 T 19-04-2016 ALIDE2_RS19150 65408be453cda31611139c1fc79c4d83 417 Gene3D G3DSA:1.20.1250.20 17 199 3.5E-28 T 19-04-2016 ALIDE2_RS06110 2715e5e169e9c89e106e719953a17336 324 PIRSF PIRSF017082 1 324 1.3E-54 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS06110 2715e5e169e9c89e106e719953a17336 324 PANTHER PTHR30349 1 291 1.1E-51 T 19-04-2016 ALIDE2_RS06110 2715e5e169e9c89e106e719953a17336 324 PANTHER PTHR30349:SF1 1 291 1.1E-51 T 19-04-2016 ALIDE2_RS06110 2715e5e169e9c89e106e719953a17336 324 SUPERFAMILY SSF53850 107 281 6.15E-5 T 19-04-2016 ALIDE2_RS06110 2715e5e169e9c89e106e719953a17336 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 320 1.6E-53 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 202 210 8.0E-24 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 8.0E-24 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 8.0E-24 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 8.0E-24 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 196 8.0E-24 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 Gene3D G3DSA:3.90.800.10 71 187 1.8E-34 T 19-04-2016 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 Gene3D G3DSA:1.10.10.350 372 465 7.9E-23 T 19-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 Gene3D G3DSA:1.10.1160.10 239 322 1.2E-32 T 19-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 312 4.2E-94 T 19-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 SUPERFAMILY SSF52374 5 301 4.56E-106 T 19-04-2016 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 SUPERFAMILY SSF48163 306 465 3.14E-40 T 19-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 Gene3D G3DSA:3.40.50.620 5 70 2.1E-48 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 Gene3D G3DSA:3.40.50.620 188 237 2.1E-48 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 PANTHER PTHR11451 5 322 8.1E-91 T 19-04-2016 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 PANTHER PTHR11451:SF41 5 322 8.1E-91 T 19-04-2016 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 465 6.9E-161 T 19-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 ALIDE2_RS16905 fa277d81374e1724d7baa6cc08f14187 467 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 6 467 31.34 T 19-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 ALIDE2_RS02440 a0c99219d3baed63a5d269685dc6b776 401 Pfam PF07687 Peptidase dimerisation domain 188 284 4.8E-13 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS02440 a0c99219d3baed63a5d269685dc6b776 401 Gene3D G3DSA:3.30.70.360 184 300 4.5E-44 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS02440 a0c99219d3baed63a5d269685dc6b776 401 SUPERFAMILY SSF55031 186 299 7.2E-34 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS02440 a0c99219d3baed63a5d269685dc6b776 401 Gene3D G3DSA:3.40.630.10 3 181 3.3E-98 T 19-04-2016 ALIDE2_RS02440 a0c99219d3baed63a5d269685dc6b776 401 Gene3D G3DSA:3.40.630.10 301 399 3.3E-98 T 19-04-2016 ALIDE2_RS02440 a0c99219d3baed63a5d269685dc6b776 401 PANTHER PTHR11014:SF63 1 400 2.8E-152 T 19-04-2016 ALIDE2_RS02440 a0c99219d3baed63a5d269685dc6b776 401 Pfam PF01546 Peptidase family M20/M25/M40 76 357 4.0E-34 T 19-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 ALIDE2_RS02440 a0c99219d3baed63a5d269685dc6b776 401 SUPERFAMILY SSF53187 2 200 1.03E-84 T 19-04-2016 ALIDE2_RS02440 a0c99219d3baed63a5d269685dc6b776 401 SUPERFAMILY SSF53187 301 399 1.03E-84 T 19-04-2016 ALIDE2_RS02440 a0c99219d3baed63a5d269685dc6b776 401 PIRSF PIRSF005962 1 399 8.7E-125 T 19-04-2016 IPR017439 Amidohydrolase GO:0016787 ALIDE2_RS02440 a0c99219d3baed63a5d269685dc6b776 401 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 383 3.3E-105 T 19-04-2016 IPR017439 Amidohydrolase GO:0016787 ALIDE2_RS02440 a0c99219d3baed63a5d269685dc6b776 401 PANTHER PTHR11014 1 400 2.8E-152 T 19-04-2016 ALIDE2_RS01505 883be44f6b85a4f6a1de893139442724 282 Gene3D G3DSA:3.40.50.1820 7 277 4.7E-42 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS01505 883be44f6b85a4f6a1de893139442724 282 Pfam PF00561 alpha/beta hydrolase fold 34 143 7.8E-13 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS01505 883be44f6b85a4f6a1de893139442724 282 PANTHER PTHR10992 10 278 1.3E-31 T 19-04-2016 ALIDE2_RS01505 883be44f6b85a4f6a1de893139442724 282 SUPERFAMILY SSF53474 11 278 1.3E-43 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS11400 4406580b57babd648dc69804b996981b 278 SUPERFAMILY SSF53213 15 271 3.92E-84 T 19-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 ALIDE2_RS11400 4406580b57babd648dc69804b996981b 278 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 17 271 6.6E-40 T 19-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 ALIDE2_RS11400 4406580b57babd648dc69804b996981b 278 PANTHER PTHR30096 13 276 6.6E-91 T 19-04-2016 ALIDE2_RS11400 4406580b57babd648dc69804b996981b 278 PIRSF PIRSF006157 12 274 7.0E-80 T 19-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 ALIDE2_RS11400 4406580b57babd648dc69804b996981b 278 PANTHER PTHR30096:SF0 13 276 6.6E-91 T 19-04-2016 ALIDE2_RS11400 4406580b57babd648dc69804b996981b 278 Gene3D G3DSA:3.40.830.10 14 271 5.4E-92 T 19-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 SUPERFAMILY SSF141868 558 804 1.57E-86 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 SUPERFAMILY SSF55785 268 381 9.71E-14 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 SMART SM00052 553 798 2.4E-117 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 Gene3D G3DSA:3.20.20.450 556 801 5.0E-93 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 SMART SM00091 6 72 0.007 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 SMART SM00091 257 325 0.099 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 SMART SM00091 134 201 1.3E-4 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 Pfam PF13426 PAS domain 268 370 1.3E-9 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 Pfam PF00563 EAL domain 560 792 9.9E-71 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 379 540 9.6E-43 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 PANTHER PTHR10799 416 654 6.2E-77 T 19-04-2016 ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 Gene3D G3DSA:3.30.450.20 248 366 2.0E-15 T 19-04-2016 ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 261 378 1.4E-7 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 SMART SM00267 372 543 1.2E-58 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 Gene3D G3DSA:3.30.450.20 8 118 1.8E-7 T 19-04-2016 ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 Pfam PF13188 PAS domain 136 175 0.044 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 Pfam PF13188 PAS domain 8 61 4.4E-5 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 Pfam PF00990 Diguanylate cyclase, GGDEF domain 383 538 8.4E-47 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 Gene3D G3DSA:3.30.450.20 126 247 2.7E-9 T 19-04-2016 ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 PANTHER PTHR10799:SF710 416 654 6.2E-77 T 19-04-2016 ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 SUPERFAMILY SSF55073 388 545 4.79E-50 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 SUPERFAMILY SSF55785 121 247 3.43E-10 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 Gene3D G3DSA:3.30.70.270 385 550 3.8E-57 T 19-04-2016 ALIDE2_RS05645 f7fae10ba9a21ab6648b62c606d11e3f 816 SUPERFAMILY SSF55785 20 130 2.28E-8 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS15115 6bf923c4c11099610c58549fdfe10cbf 74 Pfam PF04325 Protein of unknown function (DUF465) 19 65 1.8E-17 T 19-04-2016 IPR007420 Protein of unknown function DUF465 ALIDE2_RS05035 a906d29f1ed0294c1a1b906ef582a9df 296 Pfam PF03466 LysR substrate binding domain 87 294 7.9E-36 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS05035 a906d29f1ed0294c1a1b906ef582a9df 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS05035 a906d29f1ed0294c1a1b906ef582a9df 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS05035 a906d29f1ed0294c1a1b906ef582a9df 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS05035 a906d29f1ed0294c1a1b906ef582a9df 296 PANTHER PTHR30346 1 295 2.0E-69 T 19-04-2016 ALIDE2_RS05035 a906d29f1ed0294c1a1b906ef582a9df 296 Gene3D G3DSA:3.40.190.10 88 175 2.3E-17 T 19-04-2016 ALIDE2_RS05035 a906d29f1ed0294c1a1b906ef582a9df 296 SUPERFAMILY SSF53850 87 295 5.16E-37 T 19-04-2016 ALIDE2_RS05035 a906d29f1ed0294c1a1b906ef582a9df 296 Gene3D G3DSA:1.10.10.10 1 87 2.8E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05035 a906d29f1ed0294c1a1b906ef582a9df 296 SUPERFAMILY SSF46785 1 87 1.58E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05035 a906d29f1ed0294c1a1b906ef582a9df 296 Gene3D G3DSA:3.40.190.10 176 265 3.2E-19 T 19-04-2016 ALIDE2_RS05035 a906d29f1ed0294c1a1b906ef582a9df 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.0E-20 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS19250 a5fe8b933d23f517337196ef32a196dc 300 PANTHER PTHR20858:SF17 22 263 2.4E-12 T 19-04-2016 ALIDE2_RS19250 a5fe8b933d23f517337196ef32a196dc 300 Gene3D G3DSA:3.40.1190.20 15 269 1.1E-41 T 19-04-2016 IPR029056 Ribokinase-like ALIDE2_RS19250 a5fe8b933d23f517337196ef32a196dc 300 Pfam PF08543 Phosphomethylpyrimidine kinase 22 263 3.0E-32 T 19-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 ALIDE2_RS19250 a5fe8b933d23f517337196ef32a196dc 300 PANTHER PTHR20858 22 263 2.4E-12 T 19-04-2016 ALIDE2_RS19250 a5fe8b933d23f517337196ef32a196dc 300 SUPERFAMILY SSF53613 15 272 2.24E-40 T 19-04-2016 IPR029056 Ribokinase-like ALIDE2_RS11895 7d4f664292947b103aac70a4a07668a1 184 Pfam PF08281 Sigma-70, region 4 126 176 1.2E-19 T 19-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS11895 7d4f664292947b103aac70a4a07668a1 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 181 6.2E-37 T 19-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS11895 7d4f664292947b103aac70a4a07668a1 184 Pfam PF04542 Sigma-70 region 2 27 94 4.8E-19 T 19-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS11895 7d4f664292947b103aac70a4a07668a1 184 SUPERFAMILY SSF88659 102 182 5.42E-18 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS11895 7d4f664292947b103aac70a4a07668a1 184 PANTHER PTHR30173 2 182 1.7E-52 T 19-04-2016 ALIDE2_RS11895 7d4f664292947b103aac70a4a07668a1 184 Gene3D G3DSA:1.10.1740.10 3 119 1.7E-34 T 19-04-2016 ALIDE2_RS11895 7d4f664292947b103aac70a4a07668a1 184 Gene3D G3DSA:1.10.10.10 121 182 3.7E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11895 7d4f664292947b103aac70a4a07668a1 184 SUPERFAMILY SSF88946 1 111 2.98E-32 T 19-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS10765 228248529883083f6e3c69c276028ecb 276 Pfam PF06067 Domain of unknown function (DUF932) 37 265 3.0E-61 T 19-04-2016 IPR026325 Protein of unknown function DUF932 ALIDE2_RS00095 b53272661a17c7946b50b8084e547160 387 Gene3D G3DSA:1.10.540.10 2 118 2.8E-30 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00095 b53272661a17c7946b50b8084e547160 387 SUPERFAMILY SSF47203 232 380 8.86E-43 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00095 b53272661a17c7946b50b8084e547160 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 3 117 1.2E-25 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00095 b53272661a17c7946b50b8084e547160 387 PANTHER PTHR10909:SF227 1 386 5.9E-243 T 19-04-2016 ALIDE2_RS00095 b53272661a17c7946b50b8084e547160 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 220 8.2E-22 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS00095 b53272661a17c7946b50b8084e547160 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS00095 b53272661a17c7946b50b8084e547160 387 Gene3D G3DSA:1.20.140.10 221 380 1.1E-52 T 19-04-2016 ALIDE2_RS00095 b53272661a17c7946b50b8084e547160 387 PIRSF PIRSF016578 2 365 2.0E-12 T 19-04-2016 ALIDE2_RS00095 b53272661a17c7946b50b8084e547160 387 SUPERFAMILY SSF56645 2 244 9.95E-73 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS00095 b53272661a17c7946b50b8084e547160 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 380 2.1E-42 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00095 b53272661a17c7946b50b8084e547160 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS00095 b53272661a17c7946b50b8084e547160 387 Gene3D G3DSA:2.40.110.10 120 220 3.7E-35 T 19-04-2016 ALIDE2_RS00095 b53272661a17c7946b50b8084e547160 387 PANTHER PTHR10909 1 386 5.9E-243 T 19-04-2016 ALIDE2_RS02170 252db2c632b0f4a2e485e001554b6ac8 134 SUPERFAMILY SSF89796 2 116 6.28E-25 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS02170 252db2c632b0f4a2e485e001554b6ac8 134 Gene3D G3DSA:3.40.50.10540 2 111 1.5E-21 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS02170 252db2c632b0f4a2e485e001554b6ac8 134 Pfam PF02515 CoA-transferase family III 2 114 1.1E-25 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS18615 eeb51b50c6c0f5bfbb26e2dc17a19825 519 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 334 493 8.7E-47 T 19-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ALIDE2_RS18615 eeb51b50c6c0f5bfbb26e2dc17a19825 519 Pfam PF05683 Fumarase C-terminus 296 496 1.7E-80 T 19-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ALIDE2_RS18615 eeb51b50c6c0f5bfbb26e2dc17a19825 519 PANTHER PTHR30389:SF1 3 517 5.0E-287 T 19-04-2016 ALIDE2_RS18615 eeb51b50c6c0f5bfbb26e2dc17a19825 519 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 11 293 4.0E-64 T 19-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 ALIDE2_RS18615 eeb51b50c6c0f5bfbb26e2dc17a19825 519 PANTHER PTHR30389 3 517 5.0E-287 T 19-04-2016 ALIDE2_RS18615 eeb51b50c6c0f5bfbb26e2dc17a19825 519 Gene3D G3DSA:3.20.130.10 312 495 2.8E-71 T 19-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ALIDE2_RS18615 eeb51b50c6c0f5bfbb26e2dc17a19825 519 Pfam PF05681 Fumarate hydratase (Fumerase) 12 292 1.1E-100 T 19-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 ALIDE2_RS18615 eeb51b50c6c0f5bfbb26e2dc17a19825 519 PIRSF PIRSF001394 1 513 3.9E-209 T 19-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS18615 eeb51b50c6c0f5bfbb26e2dc17a19825 519 SUPERFAMILY SSF117457 326 495 1.02E-61 T 19-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ALIDE2_RS21665 35327554a1f150a6f2000fdccbf43142 501 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 379 - T 19-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 ALIDE2_RS21665 35327554a1f150a6f2000fdccbf43142 501 SUPERFAMILY SSF53067 252 495 2.46E-75 T 19-04-2016 ALIDE2_RS21665 35327554a1f150a6f2000fdccbf43142 501 PANTHER PTHR10196 1 491 1.1E-226 T 19-04-2016 ALIDE2_RS21665 35327554a1f150a6f2000fdccbf43142 501 SUPERFAMILY SSF53067 3 252 2.24E-94 T 19-04-2016 ALIDE2_RS21665 35327554a1f150a6f2000fdccbf43142 501 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 494 2.9E-209 T 19-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 ALIDE2_RS21665 35327554a1f150a6f2000fdccbf43142 501 PANTHER PTHR10196:SF44 1 491 1.1E-226 T 19-04-2016 ALIDE2_RS21665 35327554a1f150a6f2000fdccbf43142 501 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 9.8E-76 T 19-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 ALIDE2_RS21665 35327554a1f150a6f2000fdccbf43142 501 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 451 2.0E-61 T 19-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 ALIDE2_RS21665 35327554a1f150a6f2000fdccbf43142 501 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 133 145 - T 19-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 ALIDE2_RS21665 35327554a1f150a6f2000fdccbf43142 501 Gene3D G3DSA:3.30.420.40 251 493 2.8E-95 T 19-04-2016 ALIDE2_RS21665 35327554a1f150a6f2000fdccbf43142 501 PIRSF PIRSF000538 1 497 1.7E-173 T 19-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 ALIDE2_RS21665 35327554a1f150a6f2000fdccbf43142 501 Hamap MF_00186 Glycerol kinase [glpK]. 1 498 55.413 T 19-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 ALIDE2_RS21665 35327554a1f150a6f2000fdccbf43142 501 Gene3D G3DSA:3.30.420.40 1 250 6.0E-101 T 19-04-2016 ALIDE2_RS14965 c689675a90f8641a57ad1d037044cd17 605 SUPERFAMILY SSF52016 419 604 2.59E-59 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS14965 c689675a90f8641a57ad1d037044cd17 605 PANTHER PTHR21000:SF9 4 602 0.0 T 19-04-2016 ALIDE2_RS14965 c689675a90f8641a57ad1d037044cd17 605 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 5 603 7.0E-278 T 19-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 ALIDE2_RS14965 c689675a90f8641a57ad1d037044cd17 605 SUPERFAMILY SSF143975 4 418 7.45E-136 T 19-04-2016 ALIDE2_RS14965 c689675a90f8641a57ad1d037044cd17 605 PANTHER PTHR21000 4 602 0.0 T 19-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS14965 c689675a90f8641a57ad1d037044cd17 605 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 19-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS14965 c689675a90f8641a57ad1d037044cd17 605 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 19-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS14965 c689675a90f8641a57ad1d037044cd17 605 Pfam PF00920 Dehydratase family 68 601 3.7E-160 T 19-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS10525 645a266a126dd2bc91296ce80624cf12 319 Gene3D G3DSA:3.40.190.10 121 214 2.3E-4 T 19-04-2016 ALIDE2_RS10525 645a266a126dd2bc91296ce80624cf12 319 PANTHER PTHR30349 28 314 9.1E-95 T 19-04-2016 ALIDE2_RS10525 645a266a126dd2bc91296ce80624cf12 319 SUPERFAMILY SSF53850 36 227 1.14E-7 T 19-04-2016 ALIDE2_RS10525 645a266a126dd2bc91296ce80624cf12 319 PIRSF PIRSF017082 1 319 7.7E-97 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS10525 645a266a126dd2bc91296ce80624cf12 319 PANTHER PTHR30349:SF25 28 314 9.1E-95 T 19-04-2016 ALIDE2_RS10525 645a266a126dd2bc91296ce80624cf12 319 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 311 3.0E-30 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS02295 c0d779e2066e400346e8890ada2d1851 286 SUPERFAMILY SSF159501 42 265 1.54E-52 T 19-04-2016 ALIDE2_RS02295 c0d779e2066e400346e8890ada2d1851 286 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 49 234 1.0E-33 T 19-04-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN ALIDE2_RS01640 395a2032284a8f9f735aa1a5ed8d6576 226 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 80 218 5.1E-10 T 19-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component ALIDE2_RS01640 395a2032284a8f9f735aa1a5ed8d6576 226 Gene3D G3DSA:3.40.50.10610 31 226 1.2E-42 T 19-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component ALIDE2_RS01640 395a2032284a8f9f735aa1a5ed8d6576 226 SUPERFAMILY SSF159594 42 224 1.7E-27 T 19-04-2016 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 227 419 8.8E-63 T 19-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 SUPERFAMILY SSF47323 693 900 3.92E-29 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 Gene3D G3DSA:3.90.740.10 234 474 1.0E-57 T 19-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 Pfam PF08264 Anticodon-binding domain of tRNA 738 863 1.2E-13 T 19-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 901 22.219 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 SUPERFAMILY SSF52374 433 619 5.12E-138 T 19-04-2016 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 SUPERFAMILY SSF52374 4 232 5.12E-138 T 19-04-2016 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 SUPERFAMILY SSF52374 649 696 5.12E-138 T 19-04-2016 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 PANTHER PTHR11946:SF7 645 901 0.0 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 PANTHER PTHR11946:SF7 254 473 0.0 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 PANTHER PTHR11946:SF7 489 590 0.0 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 PANTHER PTHR11946:SF7 1 206 0.0 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 435 617 5.0E-9 T 19-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 649 679 5.1E-5 T 19-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 SUPERFAMILY SSF50677 253 429 3.77E-48 T 19-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 901 0.0 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.0E-47 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.0E-47 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 PRINTS PR00985 Leucyl-tRNA synthetase signature 543 565 7.0E-47 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 PRINTS PR00985 Leucyl-tRNA synthetase signature 576 586 7.0E-47 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 PRINTS PR00985 Leucyl-tRNA synthetase signature 221 240 7.0E-47 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 PRINTS PR00985 Leucyl-tRNA synthetase signature 505 523 7.0E-47 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 PANTHER PTHR11946 645 901 0.0 T 19-04-2016 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 PANTHER PTHR11946 254 473 0.0 T 19-04-2016 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 PANTHER PTHR11946 489 590 0.0 T 19-04-2016 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 PANTHER PTHR11946 1 206 0.0 T 19-04-2016 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 Gene3D G3DSA:1.10.730.10 676 837 7.8E-36 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 Pfam PF09334 tRNA synthetases class I (M) 38 171 1.3E-17 T 19-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 Gene3D G3DSA:3.40.50.620 5 233 4.5E-126 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 Gene3D G3DSA:3.40.50.620 508 591 4.5E-126 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS22140 6c235449011c8802d9b6f054d511c6e6 901 Gene3D G3DSA:3.40.50.620 648 675 4.5E-126 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS03815 46a5321a32032e094ae99810e74732ab 406 Gene3D G3DSA:3.40.630.10 312 400 1.1E-95 T 19-04-2016 ALIDE2_RS03815 46a5321a32032e094ae99810e74732ab 406 Gene3D G3DSA:3.40.630.10 12 190 1.1E-95 T 19-04-2016 ALIDE2_RS03815 46a5321a32032e094ae99810e74732ab 406 Pfam PF01546 Peptidase family M20/M25/M40 85 397 9.4E-32 T 19-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 ALIDE2_RS03815 46a5321a32032e094ae99810e74732ab 406 Gene3D G3DSA:3.30.70.360 193 311 6.8E-34 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS03815 46a5321a32032e094ae99810e74732ab 406 SUPERFAMILY SSF55031 196 310 2.88E-25 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS03815 46a5321a32032e094ae99810e74732ab 406 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 23 388 5.7E-103 T 19-04-2016 IPR017439 Amidohydrolase GO:0016787 ALIDE2_RS03815 46a5321a32032e094ae99810e74732ab 406 Pfam PF07687 Peptidase dimerisation domain 198 294 1.6E-4 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS03815 46a5321a32032e094ae99810e74732ab 406 PIRSF PIRSF005962 10 404 4.6E-116 T 19-04-2016 IPR017439 Amidohydrolase GO:0016787 ALIDE2_RS03815 46a5321a32032e094ae99810e74732ab 406 SUPERFAMILY SSF53187 13 209 1.22E-80 T 19-04-2016 ALIDE2_RS03815 46a5321a32032e094ae99810e74732ab 406 SUPERFAMILY SSF53187 312 399 1.22E-80 T 19-04-2016 ALIDE2_RS03815 46a5321a32032e094ae99810e74732ab 406 PANTHER PTHR11014 15 404 1.4E-140 T 19-04-2016 ALIDE2_RS03815 46a5321a32032e094ae99810e74732ab 406 PANTHER PTHR11014:SF63 15 404 1.4E-140 T 19-04-2016 ALIDE2_RS11205 ad78a82e5811ecc41b602692b95fb2d6 443 ProSitePatterns PS00216 Sugar transport proteins signature 1. 314 331 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ALIDE2_RS11205 ad78a82e5811ecc41b602692b95fb2d6 443 PANTHER PTHR23508 19 443 3.3E-129 T 19-04-2016 ALIDE2_RS11205 ad78a82e5811ecc41b602692b95fb2d6 443 PANTHER PTHR23508:SF16 19 443 3.3E-129 T 19-04-2016 ALIDE2_RS11205 ad78a82e5811ecc41b602692b95fb2d6 443 SUPERFAMILY SSF103473 35 433 2.49E-35 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS11205 ad78a82e5811ecc41b602692b95fb2d6 443 Pfam PF07690 Major Facilitator Superfamily 134 390 7.3E-16 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS11205 ad78a82e5811ecc41b602692b95fb2d6 443 Gene3D G3DSA:1.20.1250.20 263 433 2.8E-5 T 19-04-2016 ALIDE2_RS11205 ad78a82e5811ecc41b602692b95fb2d6 443 Gene3D G3DSA:1.20.1250.20 50 230 1.5E-15 T 19-04-2016 ALIDE2_RS24060 d135284ceef04877f51284d0f06b653f 285 Pfam PF03972 MmgE/PrpD family 9 214 1.2E-19 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS24060 d135284ceef04877f51284d0f06b653f 285 SUPERFAMILY SSF103378 6 211 4.45E-23 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS20630 82d6a3c13b0adae9e2c5fee449f0ad2b 986 Pfam PF07695 7TM diverse intracellular signalling 194 378 1.9E-6 T 19-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 ALIDE2_RS20630 82d6a3c13b0adae9e2c5fee449f0ad2b 986 Pfam PF00990 Diguanylate cyclase, GGDEF domain 525 680 2.4E-35 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS20630 82d6a3c13b0adae9e2c5fee449f0ad2b 986 Pfam PF00563 EAL domain 715 939 1.9E-58 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS20630 82d6a3c13b0adae9e2c5fee449f0ad2b 986 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 521 684 6.7E-31 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS20630 82d6a3c13b0adae9e2c5fee449f0ad2b 986 Gene3D G3DSA:3.20.20.450 713 950 1.5E-68 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS20630 82d6a3c13b0adae9e2c5fee449f0ad2b 986 SUPERFAMILY SSF141868 713 950 7.59E-64 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS20630 82d6a3c13b0adae9e2c5fee449f0ad2b 986 Gene3D G3DSA:3.30.70.270 526 688 5.4E-43 T 19-04-2016 ALIDE2_RS20630 82d6a3c13b0adae9e2c5fee449f0ad2b 986 SMART SM00267 514 686 9.0E-47 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS20630 82d6a3c13b0adae9e2c5fee449f0ad2b 986 SMART SM00052 698 945 2.7E-70 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS20630 82d6a3c13b0adae9e2c5fee449f0ad2b 986 SUPERFAMILY SSF55785 399 484 1.56E-6 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS20630 82d6a3c13b0adae9e2c5fee449f0ad2b 986 SUPERFAMILY SSF55073 530 687 9.42E-36 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS20630 82d6a3c13b0adae9e2c5fee449f0ad2b 986 PANTHER PTHR33121:SF10 715 976 2.5E-56 T 19-04-2016 ALIDE2_RS20630 82d6a3c13b0adae9e2c5fee449f0ad2b 986 Gene3D G3DSA:3.30.450.20 399 514 2.0E-8 T 19-04-2016 ALIDE2_RS20630 82d6a3c13b0adae9e2c5fee449f0ad2b 986 PANTHER PTHR33121 715 976 2.5E-56 T 19-04-2016 ALIDE2_RS13465 9aaf1270137548b8ab55bccb69e18886 163 Gene3D G3DSA:2.60.40.420 40 160 1.0E-35 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS13465 9aaf1270137548b8ab55bccb69e18886 163 SUPERFAMILY SSF49503 50 160 1.1E-31 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS13465 9aaf1270137548b8ab55bccb69e18886 163 ProDom PD003122 COPPER METAL-BINDING BLUE ELECTRON COPPER-BINDING PRECURSOR PHYTOCYANIN SIGNAL GLYCOPROTEIN EARLY 127 160 0.002 T 19-04-2016 IPR003245 Phytocyanin domain GO:0009055 ALIDE2_RS13465 9aaf1270137548b8ab55bccb69e18886 163 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 55 160 2.6E-10 T 19-04-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 ALIDE2_RS14655 85ebbdeb1da9a6fd14a2b4bc961dc003 224 SUPERFAMILY SSF51306 98 220 5.93E-34 T 19-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C ALIDE2_RS14655 85ebbdeb1da9a6fd14a2b4bc961dc003 224 Pfam PF01726 LexA DNA binding domain 6 68 1.3E-25 T 19-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 ALIDE2_RS14655 85ebbdeb1da9a6fd14a2b4bc961dc003 224 Gene3D G3DSA:2.10.109.10 99 221 7.7E-41 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS14655 85ebbdeb1da9a6fd14a2b4bc961dc003 224 Hamap MF_00015 LexA repressor [lexA]. 6 221 30.522 T 19-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 ALIDE2_RS14655 85ebbdeb1da9a6fd14a2b4bc961dc003 224 TIGRFAM TIGR00498 lexA: repressor LexA 6 221 1.6E-65 T 19-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 ALIDE2_RS14655 85ebbdeb1da9a6fd14a2b4bc961dc003 224 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 173 185 4.3E-11 T 19-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ALIDE2_RS14655 85ebbdeb1da9a6fd14a2b4bc961dc003 224 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 145 156 4.3E-11 T 19-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ALIDE2_RS14655 85ebbdeb1da9a6fd14a2b4bc961dc003 224 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 134 144 4.3E-11 T 19-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ALIDE2_RS14655 85ebbdeb1da9a6fd14a2b4bc961dc003 224 SUPERFAMILY SSF46785 6 73 7.75E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14655 85ebbdeb1da9a6fd14a2b4bc961dc003 224 PANTHER PTHR33516:SF2 3 224 1.5E-82 T 19-04-2016 ALIDE2_RS14655 85ebbdeb1da9a6fd14a2b4bc961dc003 224 Pfam PF00717 Peptidase S24-like 137 202 4.9E-14 T 19-04-2016 IPR019759 Peptidase S24/S26A/S26B ALIDE2_RS14655 85ebbdeb1da9a6fd14a2b4bc961dc003 224 PANTHER PTHR33516 3 224 1.5E-82 T 19-04-2016 ALIDE2_RS14655 85ebbdeb1da9a6fd14a2b4bc961dc003 224 Gene3D G3DSA:1.10.10.10 6 72 9.5E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 PANTHER PTHR11455 2 482 1.2E-178 T 19-04-2016 ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 333 345 - T 19-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 Gene3D G3DSA:1.10.579.10 293 482 6.8E-74 T 19-04-2016 ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 SUPERFAMILY SSF52425 9 188 1.96E-48 T 19-04-2016 IPR006050 DNA photolyase, N-terminal ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 Pfam PF03441 FAD binding domain of DNA photolyase 284 482 6.1E-80 T 19-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 Pfam PF00875 DNA photolyase 9 178 1.1E-47 T 19-04-2016 IPR006050 DNA photolyase, N-terminal ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 353 372 - T 19-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 Gene3D G3DSA:1.25.40.80 158 172 9.7E-33 T 19-04-2016 ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 Gene3D G3DSA:1.25.40.80 216 292 9.7E-33 T 19-04-2016 ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 Gene3D G3DSA:3.40.50.620 6 157 2.0E-43 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 PRINTS PR00147 DNA photolyase signature 392 406 5.0E-29 T 19-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 PRINTS PR00147 DNA photolyase signature 333 349 5.0E-29 T 19-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 PRINTS PR00147 DNA photolyase signature 153 169 5.0E-29 T 19-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 PRINTS PR00147 DNA photolyase signature 353 371 5.0E-29 T 19-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 PANTHER PTHR11455:SF18 2 482 1.2E-178 T 19-04-2016 ALIDE2_RS10430 b25a084fd85336db2a1e8aaeb4846985 491 SUPERFAMILY SSF48173 208 483 1.31E-101 T 19-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain ALIDE2_RS00760 f7f20a5cf6ee08ad57ef604f8e2a8799 297 PANTHER PTHR28152 23 297 8.8E-74 T 19-04-2016 ALIDE2_RS00760 f7f20a5cf6ee08ad57ef604f8e2a8799 297 PANTHER PTHR28152:SF1 23 297 8.8E-74 T 19-04-2016 ALIDE2_RS00760 f7f20a5cf6ee08ad57ef604f8e2a8799 297 Pfam PF13452 N-terminal half of MaoC dehydratase 65 150 2.3E-8 T 19-04-2016 ALIDE2_RS00760 f7f20a5cf6ee08ad57ef604f8e2a8799 297 Gene3D G3DSA:3.10.129.10 150 259 5.7E-9 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS00760 f7f20a5cf6ee08ad57ef604f8e2a8799 297 SUPERFAMILY SSF54637 179 296 1.49E-16 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS22260 c4b344400a14e2e693acd03e9a569adc 242 Pfam PF00814 Glycoprotease family 35 129 3.1E-20 T 19-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ALIDE2_RS22260 c4b344400a14e2e693acd03e9a569adc 242 SUPERFAMILY SSF53067 3 109 1.94E-21 T 19-04-2016 ALIDE2_RS22260 c4b344400a14e2e693acd03e9a569adc 242 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 220 7.0E-52 T 19-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 ALIDE2_RS22260 c4b344400a14e2e693acd03e9a569adc 242 PANTHER PTHR11735 1 134 6.7E-32 T 19-04-2016 ALIDE2_RS22260 c4b344400a14e2e693acd03e9a569adc 242 Gene3D G3DSA:3.30.420.40 1 134 2.7E-33 T 19-04-2016 ALIDE2_RS22260 c4b344400a14e2e693acd03e9a569adc 242 SUPERFAMILY SSF53067 113 218 8.67E-14 T 19-04-2016 ALIDE2_RS22260 c4b344400a14e2e693acd03e9a569adc 242 PANTHER PTHR11735:SF11 1 134 6.7E-32 T 19-04-2016 ALIDE2_RS18010 2ee3e8d0423e46a938fe5c06d8f5d71d 397 PANTHER PTHR24023:SF593 35 379 4.8E-35 T 19-04-2016 ALIDE2_RS18010 2ee3e8d0423e46a938fe5c06d8f5d71d 397 Gene3D G3DSA:3.40.50.10540 302 393 7.2E-112 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS18010 2ee3e8d0423e46a938fe5c06d8f5d71d 397 Gene3D G3DSA:3.40.50.10540 2 213 7.2E-112 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS18010 2ee3e8d0423e46a938fe5c06d8f5d71d 397 PANTHER PTHR24023 35 379 4.8E-35 T 19-04-2016 ALIDE2_RS18010 2ee3e8d0423e46a938fe5c06d8f5d71d 397 SUPERFAMILY SSF89796 1 392 2.88E-135 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS18010 2ee3e8d0423e46a938fe5c06d8f5d71d 397 Gene3D G3DSA:3.30.1540.10 219 301 3.2E-33 T 19-04-2016 ALIDE2_RS18010 2ee3e8d0423e46a938fe5c06d8f5d71d 397 Pfam PF02515 CoA-transferase family III 4 369 1.3E-124 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS14550 ad9274f36deb2f1007c26b8e82c658fa 272 PANTHER PTHR10804:SF75 3 255 1.6E-124 T 19-04-2016 ALIDE2_RS14550 ad9274f36deb2f1007c26b8e82c658fa 272 SUPERFAMILY SSF55920 4 255 4.45E-85 T 19-04-2016 IPR000994 Peptidase M24, structural domain ALIDE2_RS14550 ad9274f36deb2f1007c26b8e82c658fa 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 198 210 1.3E-14 T 19-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase ALIDE2_RS14550 ad9274f36deb2f1007c26b8e82c658fa 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 1.3E-14 T 19-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase ALIDE2_RS14550 ad9274f36deb2f1007c26b8e82c658fa 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 167 179 1.3E-14 T 19-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase ALIDE2_RS14550 ad9274f36deb2f1007c26b8e82c658fa 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 1.3E-14 T 19-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase ALIDE2_RS14550 ad9274f36deb2f1007c26b8e82c658fa 272 Gene3D G3DSA:3.90.230.10 4 257 2.9E-91 T 19-04-2016 IPR000994 Peptidase M24, structural domain ALIDE2_RS14550 ad9274f36deb2f1007c26b8e82c658fa 272 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 256 1.3E-87 T 19-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 ALIDE2_RS14550 ad9274f36deb2f1007c26b8e82c658fa 272 Pfam PF00557 Metallopeptidase family M24 14 248 7.9E-54 T 19-04-2016 IPR000994 Peptidase M24, structural domain ALIDE2_RS14550 ad9274f36deb2f1007c26b8e82c658fa 272 PANTHER PTHR10804 3 255 1.6E-124 T 19-04-2016 ALIDE2_RS14550 ad9274f36deb2f1007c26b8e82c658fa 272 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 173 191 - T 19-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 ALIDE2_RS14550 ad9274f36deb2f1007c26b8e82c658fa 272 Hamap MF_01974 Methionine aminopeptidase [map]. 4 257 39.34 T 19-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 ALIDE2_RS04440 f6fd9dbcd91658c155033df5e13aa6de 85 Gene3D G3DSA:2.40.50.100 21 83 2.3E-29 T 19-04-2016 ALIDE2_RS04440 f6fd9dbcd91658c155033df5e13aa6de 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 27.778 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS04440 f6fd9dbcd91658c155033df5e13aa6de 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.88E-37 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS04440 f6fd9dbcd91658c155033df5e13aa6de 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.88E-37 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS04440 f6fd9dbcd91658c155033df5e13aa6de 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.88E-37 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS04440 f6fd9dbcd91658c155033df5e13aa6de 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.4E-36 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS04440 f6fd9dbcd91658c155033df5e13aa6de 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 19-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS04440 f6fd9dbcd91658c155033df5e13aa6de 85 SUPERFAMILY SSF110324 2 80 1.99E-32 T 19-04-2016 ALIDE2_RS04440 f6fd9dbcd91658c155033df5e13aa6de 85 PANTHER PTHR15893 1 85 2.8E-42 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS04440 f6fd9dbcd91658c155033df5e13aa6de 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 8.0E-16 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS04440 f6fd9dbcd91658c155033df5e13aa6de 85 Pfam PF01016 Ribosomal L27 protein 2 81 7.6E-36 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS22650 f956b1f3a0af1812931845cc76df60b2 170 Gene3D G3DSA:3.30.70.920 57 153 3.2E-29 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ALIDE2_RS22650 f956b1f3a0af1812931845cc76df60b2 170 Pfam PF01037 Lrp/AsnC ligand binding domain 70 144 1.2E-17 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ALIDE2_RS22650 f956b1f3a0af1812931845cc76df60b2 170 SUPERFAMILY SSF46785 4 63 1.8E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22650 f956b1f3a0af1812931845cc76df60b2 170 PANTHER PTHR30154:SF0 1 168 1.0E-72 T 19-04-2016 ALIDE2_RS22650 f956b1f3a0af1812931845cc76df60b2 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 5.7E-19 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS22650 f956b1f3a0af1812931845cc76df60b2 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 5.7E-19 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS22650 f956b1f3a0af1812931845cc76df60b2 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 5.7E-19 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS22650 f956b1f3a0af1812931845cc76df60b2 170 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 19-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ALIDE2_RS22650 f956b1f3a0af1812931845cc76df60b2 170 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 1.3E-19 T 19-04-2016 ALIDE2_RS22650 f956b1f3a0af1812931845cc76df60b2 170 Gene3D G3DSA:1.10.10.10 5 56 4.9E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22650 f956b1f3a0af1812931845cc76df60b2 170 SUPERFAMILY SSF54909 66 153 2.55E-17 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel ALIDE2_RS22650 f956b1f3a0af1812931845cc76df60b2 170 SMART SM00344 4 113 3.7E-46 T 19-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ALIDE2_RS22650 f956b1f3a0af1812931845cc76df60b2 170 PANTHER PTHR30154 1 168 1.0E-72 T 19-04-2016 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 19-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 Gene3D G3DSA:3.10.20.30 2 57 3.7E-7 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 621 1.6E-203 T 19-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 122 2.1E-16 T 19-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 Pfam PF00384 Molybdopterin oxidoreductase 273 622 2.9E-37 T 19-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 SUPERFAMILY SSF54292 1 74 4.1E-20 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 SUPERFAMILY SSF54862 75 211 4.02E-35 T 19-04-2016 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 19-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 PANTHER PTHR11615:SF38 463 654 1.9E-151 T 19-04-2016 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 PANTHER PTHR11615:SF38 3 342 1.9E-151 T 19-04-2016 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 PANTHER PTHR11615 463 654 1.9E-151 T 19-04-2016 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 PANTHER PTHR11615 3 342 1.9E-151 T 19-04-2016 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 Gene3D G3DSA:3.40.50.740 475 648 8.6E-55 T 19-04-2016 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 Gene3D G3DSA:3.40.50.740 273 344 8.6E-55 T 19-04-2016 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 SMART SM00929 83 123 5.3E-20 T 19-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 76 1.5E-18 T 19-04-2016 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 19-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 ALIDE2_RS19910 fd412c941b20bc618be615ff7fe6056e 706 SUPERFAMILY SSF53706 214 645 2.09E-96 T 19-04-2016 ALIDE2_RS20030 25e98a519e22bca2ae23ee482140b149 305 PANTHER PTHR31752:SF13 97 303 1.0E-21 T 19-04-2016 ALIDE2_RS20030 25e98a519e22bca2ae23ee482140b149 305 PANTHER PTHR31752 97 303 1.0E-21 T 19-04-2016 ALIDE2_RS20030 25e98a519e22bca2ae23ee482140b149 305 Pfam PF03547 Membrane transport protein 153 299 3.1E-10 T 19-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 ALIDE2_RS04765 535d347a941ae3d82ed627538835a9cf 298 Hamap MF_00361 NAD kinase [nadK]. 6 293 31.022 T 19-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 ALIDE2_RS04765 535d347a941ae3d82ed627538835a9cf 298 SUPERFAMILY SSF111331 25 295 1.1E-81 T 19-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain ALIDE2_RS04765 535d347a941ae3d82ed627538835a9cf 298 PANTHER PTHR20275 59 295 8.3E-85 T 19-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 ALIDE2_RS04765 535d347a941ae3d82ed627538835a9cf 298 Gene3D G3DSA:2.60.200.30 156 267 3.4E-43 T 19-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 ALIDE2_RS04765 535d347a941ae3d82ed627538835a9cf 298 Pfam PF01513 ATP-NAD kinase 67 274 3.9E-55 T 19-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 ALIDE2_RS04765 535d347a941ae3d82ed627538835a9cf 298 Gene3D G3DSA:3.40.50.10330 5 155 5.7E-35 T 19-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 ALIDE2_RS23445 30a88c29e96375f23b8ff806b8a631ec 161 PANTHER PTHR24567 30 159 1.5E-14 T 19-04-2016 ALIDE2_RS23445 30a88c29e96375f23b8ff806b8a631ec 161 Gene3D G3DSA:2.60.120.10 31 148 9.6E-25 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS23445 30a88c29e96375f23b8ff806b8a631ec 161 PANTHER PTHR24567:SF30 30 159 1.5E-14 T 19-04-2016 ALIDE2_RS23445 30a88c29e96375f23b8ff806b8a631ec 161 SUPERFAMILY SSF51206 30 140 3.01E-24 T 19-04-2016 IPR018490 Cyclic nucleotide-binding-like ALIDE2_RS23445 30a88c29e96375f23b8ff806b8a631ec 161 SMART SM00100 27 144 1.2E-14 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS23445 30a88c29e96375f23b8ff806b8a631ec 161 Pfam PF00027 Cyclic nucleotide-binding domain 46 131 2.9E-19 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS09510 2e1a6d1cfe6e66319619a50ef5a6edc7 760 Pfam PF00271 Helicase conserved C-terminal domain 585 696 1.2E-6 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS09510 2e1a6d1cfe6e66319619a50ef5a6edc7 760 Gene3D G3DSA:3.40.50.300 346 404 2.2E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09510 2e1a6d1cfe6e66319619a50ef5a6edc7 760 Gene3D G3DSA:3.40.50.300 64 188 2.2E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09510 2e1a6d1cfe6e66319619a50ef5a6edc7 760 SUPERFAMILY SSF52540 572 737 8.77E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09510 2e1a6d1cfe6e66319619a50ef5a6edc7 760 SMART SM00487 70 414 3.1E-7 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS09510 2e1a6d1cfe6e66319619a50ef5a6edc7 760 SUPERFAMILY SSF52540 352 394 8.77E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09510 2e1a6d1cfe6e66319619a50ef5a6edc7 760 Gene3D G3DSA:3.40.50.300 580 705 1.1E-9 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09510 2e1a6d1cfe6e66319619a50ef5a6edc7 760 PANTHER PTHR10799:SF573 92 195 7.5E-15 T 19-04-2016 ALIDE2_RS09510 2e1a6d1cfe6e66319619a50ef5a6edc7 760 PANTHER PTHR10799:SF573 348 426 7.5E-15 T 19-04-2016 ALIDE2_RS09510 2e1a6d1cfe6e66319619a50ef5a6edc7 760 PANTHER PTHR10799:SF573 471 703 7.5E-15 T 19-04-2016 ALIDE2_RS09510 2e1a6d1cfe6e66319619a50ef5a6edc7 760 PANTHER PTHR10799 92 195 7.5E-15 T 19-04-2016 ALIDE2_RS09510 2e1a6d1cfe6e66319619a50ef5a6edc7 760 PANTHER PTHR10799 348 426 7.5E-15 T 19-04-2016 ALIDE2_RS09510 2e1a6d1cfe6e66319619a50ef5a6edc7 760 PANTHER PTHR10799 471 703 7.5E-15 T 19-04-2016 ALIDE2_RS09510 2e1a6d1cfe6e66319619a50ef5a6edc7 760 SUPERFAMILY SSF52540 70 160 3.19E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09510 2e1a6d1cfe6e66319619a50ef5a6edc7 760 SUPERFAMILY SSF52540 347 413 3.19E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05830 e3d23d4d0c753e6d7d3ed279a1031377 310 Gene3D G3DSA:3.40.50.1220 185 310 1.6E-56 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS05830 e3d23d4d0c753e6d7d3ed279a1031377 310 Pfam PF01012 Electron transfer flavoprotein domain 4 169 3.0E-36 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS05830 e3d23d4d0c753e6d7d3ed279a1031377 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 7.1E-34 T 19-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal ALIDE2_RS05830 e3d23d4d0c753e6d7d3ed279a1031377 310 PIRSF PIRSF000089 1 310 1.1E-98 T 19-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 ALIDE2_RS05830 e3d23d4d0c753e6d7d3ed279a1031377 310 SUPERFAMILY SSF52467 189 309 7.63E-42 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS05830 e3d23d4d0c753e6d7d3ed279a1031377 310 SUPERFAMILY SSF52402 3 186 6.21E-54 T 19-04-2016 ALIDE2_RS05830 e3d23d4d0c753e6d7d3ed279a1031377 310 Gene3D G3DSA:3.40.50.620 1 181 4.6E-60 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS05830 e3d23d4d0c753e6d7d3ed279a1031377 310 PANTHER PTHR10909 104 307 2.7E-115 T 19-04-2016 ALIDE2_RS05830 e3d23d4d0c753e6d7d3ed279a1031377 310 PANTHER PTHR10909:SF294 104 307 2.7E-115 T 19-04-2016 ALIDE2_RS05830 e3d23d4d0c753e6d7d3ed279a1031377 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 19-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site ALIDE2_RS05830 e3d23d4d0c753e6d7d3ed279a1031377 310 SMART SM00893 3 182 7.1E-54 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS12045 071fc424661f762131b59382af378011 898 Gene3D G3DSA:3.40.50.970 480 711 3.5E-112 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS12045 071fc424661f762131b59382af378011 898 Gene3D G3DSA:3.40.50.970 61 474 3.0E-153 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS12045 071fc424661f762131b59382af378011 898 PANTHER PTHR11624 370 457 0.0 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS12045 071fc424661f762131b59382af378011 898 PANTHER PTHR11624 562 776 0.0 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS12045 071fc424661f762131b59382af378011 898 PANTHER PTHR11624 795 880 0.0 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS12045 071fc424661f762131b59382af378011 898 PANTHER PTHR11624 489 544 0.0 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS12045 071fc424661f762131b59382af378011 898 PANTHER PTHR11624 78 301 0.0 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS12045 071fc424661f762131b59382af378011 898 PANTHER PTHR11624:SF67 370 457 0.0 T 19-04-2016 ALIDE2_RS12045 071fc424661f762131b59382af378011 898 PANTHER PTHR11624:SF67 562 776 0.0 T 19-04-2016 ALIDE2_RS12045 071fc424661f762131b59382af378011 898 PANTHER PTHR11624:SF67 795 880 0.0 T 19-04-2016 ALIDE2_RS12045 071fc424661f762131b59382af378011 898 PANTHER PTHR11624:SF67 489 544 0.0 T 19-04-2016 ALIDE2_RS12045 071fc424661f762131b59382af378011 898 PANTHER PTHR11624:SF67 78 301 0.0 T 19-04-2016 ALIDE2_RS12045 071fc424661f762131b59382af378011 898 Gene3D G3DSA:3.40.50.920 715 896 8.1E-74 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS12045 071fc424661f762131b59382af378011 898 PIRSF PIRSF000156 4 898 0.0 T 19-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ALIDE2_RS12045 071fc424661f762131b59382af378011 898 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 11 897 0.0 T 19-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ALIDE2_RS12045 071fc424661f762131b59382af378011 898 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 369 432 9.7E-5 T 19-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 ALIDE2_RS12045 071fc424661f762131b59382af378011 898 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 145 300 1.5E-10 T 19-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 ALIDE2_RS12045 071fc424661f762131b59382af378011 898 SUPERFAMILY SSF52922 712 896 1.5E-57 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS12045 071fc424661f762131b59382af378011 898 SUPERFAMILY SSF52518 481 708 5.77E-94 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS12045 071fc424661f762131b59382af378011 898 SUPERFAMILY SSF52518 61 474 2.05E-136 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS07010 4f42768609d3210b2e2f3f542101f402 451 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 232 246 - T 19-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ALIDE2_RS07010 4f42768609d3210b2e2f3f542101f402 451 SMART SM00363 131 188 7.8E-8 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS07010 4f42768609d3210b2e2f3f542101f402 451 SUPERFAMILY SSF55120 193 362 5.52E-41 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS07010 4f42768609d3210b2e2f3f542101f402 451 PANTHER PTHR21600:SF2 132 369 1.1E-78 T 19-04-2016 ALIDE2_RS07010 4f42768609d3210b2e2f3f542101f402 451 PANTHER PTHR21600 132 369 1.1E-78 T 19-04-2016 ALIDE2_RS07010 4f42768609d3210b2e2f3f542101f402 451 Pfam PF00849 RNA pseudouridylate synthase 194 326 2.2E-14 T 19-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS07010 4f42768609d3210b2e2f3f542101f402 451 Gene3D G3DSA:3.10.290.10 133 185 3.9E-13 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS07010 4f42768609d3210b2e2f3f542101f402 451 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 198 358 1.3E-50 T 19-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ALIDE2_RS07010 4f42768609d3210b2e2f3f542101f402 451 Pfam PF01479 S4 domain 133 176 1.7E-9 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS07010 4f42768609d3210b2e2f3f542101f402 451 SUPERFAMILY SSF55174 133 219 1.31E-16 T 19-04-2016 ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 Gene3D G3DSA:3.30.470.20 213 455 2.8E-98 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 Gene3D G3DSA:2.40.50.100 589 661 4.6E-22 T 19-04-2016 ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 Pfam PF00364 Biotin-requiring enzyme 595 660 4.4E-14 T 19-04-2016 IPR000089 Biotin/lipoyl attachment ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 SUPERFAMILY SSF51230 587 661 5.5E-19 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 SUPERFAMILY SSF51246 339 455 1.15E-32 T 19-04-2016 IPR011054 Rudiment single hybrid motif ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 SUPERFAMILY SSF52440 5 121 8.63E-47 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 124 330 3.6E-75 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 Pfam PF02785 Biotin carboxylase C-terminal domain 344 452 2.3E-28 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 Gene3D G3DSA:3.40.50.20 10 137 1.2E-47 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 294 301 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 PANTHER PTHR18866 5 662 1.5E-288 T 19-04-2016 ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 Gene3D G3DSA:3.30.1490.20 138 209 1.1E-23 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 Pfam PF00289 Biotin carboxylase, N-terminal domain 10 118 2.5E-41 T 19-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 SMART SM00878 344 452 1.9E-49 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 SUPERFAMILY SSF56059 91 351 1.47E-66 T 19-04-2016 ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 PANTHER PTHR18866:SF102 5 662 1.5E-288 T 19-04-2016 ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 161 175 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS00905 877c3173f215dabc6572f88d1638c24f 664 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 617 634 - T 19-04-2016 IPR001882 Biotin-binding site ALIDE2_RS16070 3edd8b61cd390a27891fff000962fe26 167 Gene3D G3DSA:3.40.50.360 6 162 1.8E-38 T 19-04-2016 IPR029039 Flavoprotein-like domain ALIDE2_RS16070 3edd8b61cd390a27891fff000962fe26 167 SUPERFAMILY SSF52218 7 160 6.81E-33 T 19-04-2016 IPR029039 Flavoprotein-like domain ALIDE2_RS16070 3edd8b61cd390a27891fff000962fe26 167 Pfam PF03358 NADPH-dependent FMN reductase 50 111 9.1E-7 T 19-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ALIDE2_RS11915 16bbfd5813a57863a3fa3bbc252e75e2 196 SUPERFAMILY SSF54211 3 123 6.45E-37 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS11915 16bbfd5813a57863a3fa3bbc252e75e2 196 SUPERFAMILY SSF54980 129 194 1.15E-11 T 19-04-2016 IPR009022 Elongation factor G, III-V domain ALIDE2_RS11915 16bbfd5813a57863a3fa3bbc252e75e2 196 Pfam PF01205 Uncharacterized protein family UPF0029 16 118 8.9E-25 T 19-04-2016 IPR001498 Impact, N-terminal ALIDE2_RS11915 16bbfd5813a57863a3fa3bbc252e75e2 196 PANTHER PTHR16301 12 192 4.8E-43 T 19-04-2016 IPR023582 Impact family ALIDE2_RS11915 16bbfd5813a57863a3fa3bbc252e75e2 196 Gene3D G3DSA:3.30.230.30 4 124 3.0E-40 T 19-04-2016 IPR001498 Impact, N-terminal ALIDE2_RS11915 16bbfd5813a57863a3fa3bbc252e75e2 196 Pfam PF09186 Domain of unknown function (DUF1949) 134 189 4.3E-13 T 19-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal ALIDE2_RS11915 16bbfd5813a57863a3fa3bbc252e75e2 196 Gene3D G3DSA:3.30.70.240 130 196 1.1E-7 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain ALIDE2_RS06605 a3e0f09e646e348275b98a24f71defeb 96 PIRSF PIRSF003135 1 96 1.3E-13 T 19-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 ALIDE2_RS06605 a3e0f09e646e348275b98a24f71defeb 96 Gene3D G3DSA:2.40.50.140 3 95 1.5E-25 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS06605 a3e0f09e646e348275b98a24f71defeb 96 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 95 2.6E-31 T 19-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 ALIDE2_RS06605 a3e0f09e646e348275b98a24f71defeb 96 SUPERFAMILY SSF50249 2 94 7.28E-19 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS03305 34e11ff3e9cf408c35e0f0d835a6973e 130 Gene3D G3DSA:3.30.230.10 7 130 3.9E-48 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALIDE2_RS03305 34e11ff3e9cf408c35e0f0d835a6973e 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.9E-44 T 19-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS03305 34e11ff3e9cf408c35e0f0d835a6973e 130 SUPERFAMILY SSF54211 6 130 3.3E-44 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS03305 34e11ff3e9cf408c35e0f0d835a6973e 130 PANTHER PTHR21569 8 130 2.5E-63 T 19-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS03305 34e11ff3e9cf408c35e0f0d835a6973e 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 30.351 T 19-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid ALIDE2_RS03305 34e11ff3e9cf408c35e0f0d835a6973e 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 19-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS05610 f82a67de0c5dd2169f9de8fd56172585 480 Gene3D G3DSA:3.30.70.20 221 304 6.9E-12 T 19-04-2016 ALIDE2_RS05610 f82a67de0c5dd2169f9de8fd56172585 480 Gene3D G3DSA:2.60.40.10 363 480 1.3E-34 T 19-04-2016 IPR013783 Immunoglobulin-like fold ALIDE2_RS05610 f82a67de0c5dd2169f9de8fd56172585 480 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 45 477 1.3E-155 T 19-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 ALIDE2_RS05610 f82a67de0c5dd2169f9de8fd56172585 480 PANTHER PTHR24960:SF45 7 402 6.6E-132 T 19-04-2016 ALIDE2_RS05610 f82a67de0c5dd2169f9de8fd56172585 480 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 363 479 2.6E-27 T 19-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain ALIDE2_RS05610 f82a67de0c5dd2169f9de8fd56172585 480 Pfam PF12801 4Fe-4S binding domain 101 141 1.7E-10 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS05610 f82a67de0c5dd2169f9de8fd56172585 480 Gene3D G3DSA:1.10.1060.10 305 327 3.4E-4 T 19-04-2016 ALIDE2_RS05610 f82a67de0c5dd2169f9de8fd56172585 480 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 275 286 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS05610 f82a67de0c5dd2169f9de8fd56172585 480 SUPERFAMILY SSF54862 177 373 2.09E-31 T 19-04-2016 ALIDE2_RS05610 f82a67de0c5dd2169f9de8fd56172585 480 SUPERFAMILY SSF54862 109 131 2.09E-31 T 19-04-2016 ALIDE2_RS05610 f82a67de0c5dd2169f9de8fd56172585 480 Pfam PF13746 4Fe-4S dicluster domain 222 327 4.9E-45 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS05610 f82a67de0c5dd2169f9de8fd56172585 480 PANTHER PTHR24960 7 402 6.6E-132 T 19-04-2016 ALIDE2_RS12250 229161f7385b07514f1147a2b661c27c 642 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS12250 229161f7385b07514f1147a2b661c27c 642 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS12250 229161f7385b07514f1147a2b661c27c 642 Pfam PF00005 ABC transporter 17 178 6.2E-22 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS12250 229161f7385b07514f1147a2b661c27c 642 Pfam PF00005 ABC transporter 333 468 9.4E-23 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS12250 229161f7385b07514f1147a2b661c27c 642 Pfam PF12848 ABC transporter 217 292 4.1E-29 T 19-04-2016 IPR032781 ABC-transporter extension domain ALIDE2_RS12250 229161f7385b07514f1147a2b661c27c 642 PANTHER PTHR19211:SF49 1 567 3.6E-287 T 19-04-2016 ALIDE2_RS12250 229161f7385b07514f1147a2b661c27c 642 PANTHER PTHR19211 1 567 3.6E-287 T 19-04-2016 ALIDE2_RS12250 229161f7385b07514f1147a2b661c27c 642 Gene3D G3DSA:3.40.50.300 1 266 2.6E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12250 229161f7385b07514f1147a2b661c27c 642 Gene3D G3DSA:3.40.50.300 310 537 4.8E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12250 229161f7385b07514f1147a2b661c27c 642 SMART SM00382 342 512 8.5E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS12250 229161f7385b07514f1147a2b661c27c 642 SMART SM00382 26 225 2.2E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS12250 229161f7385b07514f1147a2b661c27c 642 SUPERFAMILY SSF52540 119 254 1.07E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12250 229161f7385b07514f1147a2b661c27c 642 SUPERFAMILY SSF52540 2 84 1.07E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12250 229161f7385b07514f1147a2b661c27c 642 SUPERFAMILY SSF52540 298 519 1.39E-42 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03995 ddce509e773baa75508ca01e62aa9157 390 Pfam PF01966 HD domain 66 201 4.7E-16 T 19-04-2016 IPR006674 HD domain ALIDE2_RS03995 ddce509e773baa75508ca01e62aa9157 390 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 6 383 37.881 T 19-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 ALIDE2_RS03995 ddce509e773baa75508ca01e62aa9157 390 SMART SM00471 62 211 3.9E-10 T 19-04-2016 IPR003607 HD/PDEase domain ALIDE2_RS03995 ddce509e773baa75508ca01e62aa9157 390 PANTHER PTHR11373 6 164 3.4E-84 T 19-04-2016 ALIDE2_RS03995 ddce509e773baa75508ca01e62aa9157 390 SUPERFAMILY SSF109604 17 383 1.61E-88 T 19-04-2016 ALIDE2_RS03995 ddce509e773baa75508ca01e62aa9157 390 PANTHER PTHR11373:SF25 6 164 3.4E-84 T 19-04-2016 ALIDE2_RS03995 ddce509e773baa75508ca01e62aa9157 390 Pfam PF13286 Phosphohydrolase-associated domain 291 381 5.7E-30 T 19-04-2016 IPR026875 Phosphohydrolase-associated domain ALIDE2_RS03995 ddce509e773baa75508ca01e62aa9157 390 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 28 383 1.3E-92 T 19-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 ALIDE2_RS03995 ddce509e773baa75508ca01e62aa9157 390 Gene3D G3DSA:1.10.3210.10 281 385 4.3E-82 T 19-04-2016 IPR006674 HD domain ALIDE2_RS03995 ddce509e773baa75508ca01e62aa9157 390 Gene3D G3DSA:1.10.3210.10 24 220 4.3E-82 T 19-04-2016 IPR006674 HD domain ALIDE2_RS08210 9cfd3d79111f9167df1e4b453921c5c2 211 Pfam PF02630 SCO1/SenC 70 134 5.0E-6 T 19-04-2016 IPR003782 Copper chaperone SCO1/SenC ALIDE2_RS08210 9cfd3d79111f9167df1e4b453921c5c2 211 SUPERFAMILY SSF52833 69 193 3.59E-20 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS08210 9cfd3d79111f9167df1e4b453921c5c2 211 Gene3D G3DSA:3.40.30.10 69 193 2.0E-26 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 PANTHER PTHR24093:SF49 17 579 0.0 T 19-04-2016 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 PANTHER PTHR24093:SF49 617 671 0.0 T 19-04-2016 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 10 672 39.651 T 19-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 Gene3D G3DSA:2.70.150.10 46 202 1.4E-25 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 Pfam PF00702 haloacid dehalogenase-like hydrolase 295 522 5.6E-33 T 19-04-2016 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 301 307 - T 19-04-2016 IPR018303 P-type ATPase, phosphorylation site ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 Gene3D G3DSA:3.40.1110.10 313 440 6.7E-45 T 19-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 Gene3D G3DSA:3.40.50.1000 441 555 4.7E-35 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 Gene3D G3DSA:3.40.50.1000 283 312 4.7E-35 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 SUPERFAMILY SSF81653 109 201 1.1E-21 T 19-04-2016 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 531 543 2.5E-22 T 19-04-2016 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 299 313 2.5E-22 T 19-04-2016 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 455 465 2.5E-22 T 19-04-2016 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 148 162 2.5E-22 T 19-04-2016 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 527 2.5E-22 T 19-04-2016 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 Pfam PF00122 E1-E2 ATPase 67 290 3.9E-42 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 SUPERFAMILY SSF81665 30 100 7.72E-10 T 19-04-2016 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 SUPERFAMILY SSF81665 202 293 7.72E-10 T 19-04-2016 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 PANTHER PTHR24093 17 579 0.0 T 19-04-2016 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 PANTHER PTHR24093 617 671 0.0 T 19-04-2016 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 16 668 1.2E-295 T 19-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 SUPERFAMILY SSF56784 287 311 1.98E-38 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 SUPERFAMILY SSF56784 346 396 1.98E-38 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 SUPERFAMILY SSF56784 427 551 1.98E-38 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 361 596 8.4E-42 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS07190 caaad866208545d091efd70067683e5c 674 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 70 337 6.3E-33 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS20650 bc8aa7c7d416efcb6d671897fec57a1e 271 Gene3D G3DSA:1.10.10.10 7 62 1.8E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20650 bc8aa7c7d416efcb6d671897fec57a1e 271 Gene3D G3DSA:3.30.450.40 76 250 3.7E-25 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS20650 bc8aa7c7d416efcb6d671897fec57a1e 271 SUPERFAMILY SSF55781 76 250 5.95E-25 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS20650 bc8aa7c7d416efcb6d671897fec57a1e 271 PANTHER PTHR30136 1 261 2.0E-26 T 19-04-2016 ALIDE2_RS20650 bc8aa7c7d416efcb6d671897fec57a1e 271 Pfam PF09339 IclR helix-turn-helix domain 9 53 2.5E-9 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS20650 bc8aa7c7d416efcb6d671897fec57a1e 271 SUPERFAMILY SSF46785 4 72 5.53E-9 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 PANTHER PTHR24322 158 190 3.1E-51 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 PANTHER PTHR24322 17 142 3.1E-51 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 Gene3D G3DSA:3.40.50.720 5 252 1.6E-82 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.8E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.8E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.8E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.8E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.8E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 4.8E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 SUPERFAMILY SSF51735 8 252 1.32E-78 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 251 7.9E-58 T 19-04-2016 ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 193 0.0057 T 19-04-2016 ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.7E-10 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.7E-10 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12490 36f1219251556b910064db9415aff64f 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.7E-10 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07365 edf553fa929c5d62deeeee100403edd1 386 PANTHER PTHR24023 61 372 1.8E-100 T 19-04-2016 ALIDE2_RS07365 edf553fa929c5d62deeeee100403edd1 386 Gene3D G3DSA:3.30.1540.10 230 299 9.9E-8 T 19-04-2016 ALIDE2_RS07365 edf553fa929c5d62deeeee100403edd1 386 Pfam PF02515 CoA-transferase family III 9 357 1.8E-79 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS07365 edf553fa929c5d62deeeee100403edd1 386 PANTHER PTHR24023:SF591 61 372 1.8E-100 T 19-04-2016 ALIDE2_RS07365 edf553fa929c5d62deeeee100403edd1 386 SUPERFAMILY SSF89796 7 362 1.57E-106 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07365 edf553fa929c5d62deeeee100403edd1 386 Gene3D G3DSA:3.40.50.10540 5 213 5.5E-88 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07365 edf553fa929c5d62deeeee100403edd1 386 Gene3D G3DSA:3.40.50.10540 300 367 5.5E-88 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS14815 45412b9ce9662b4f4d69f9e22491afa3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.2E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS14815 45412b9ce9662b4f4d69f9e22491afa3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.2E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS14815 45412b9ce9662b4f4d69f9e22491afa3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.2E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS14815 45412b9ce9662b4f4d69f9e22491afa3 305 Gene3D G3DSA:3.40.190.10 202 262 5.1E-10 T 19-04-2016 ALIDE2_RS14815 45412b9ce9662b4f4d69f9e22491afa3 305 PANTHER PTHR30126:SF23 6 290 9.1E-105 T 19-04-2016 ALIDE2_RS14815 45412b9ce9662b4f4d69f9e22491afa3 305 SUPERFAMILY SSF46785 3 87 4.14E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14815 45412b9ce9662b4f4d69f9e22491afa3 305 SUPERFAMILY SSF53850 96 283 8.53E-24 T 19-04-2016 ALIDE2_RS14815 45412b9ce9662b4f4d69f9e22491afa3 305 Gene3D G3DSA:1.10.10.10 6 87 3.7E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14815 45412b9ce9662b4f4d69f9e22491afa3 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.3E-21 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS14815 45412b9ce9662b4f4d69f9e22491afa3 305 PANTHER PTHR30126 6 290 9.1E-105 T 19-04-2016 ALIDE2_RS14815 45412b9ce9662b4f4d69f9e22491afa3 305 Gene3D G3DSA:3.40.190.10 88 201 9.0E-11 T 19-04-2016 ALIDE2_RS14815 45412b9ce9662b4f4d69f9e22491afa3 305 Pfam PF03466 LysR substrate binding domain 96 286 3.0E-22 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS00690 dac6e559a84f0f8d3eba15dd29537ef9 138 PANTHER PTHR34075:SF2 1 127 1.8E-36 T 19-04-2016 ALIDE2_RS00690 dac6e559a84f0f8d3eba15dd29537ef9 138 SUPERFAMILY SSF50249 5 129 8.39E-40 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS00690 dac6e559a84f0f8d3eba15dd29537ef9 138 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 57 122 3.2E-24 T 19-04-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal ALIDE2_RS00690 dac6e559a84f0f8d3eba15dd29537ef9 138 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 20 55 4.7E-14 T 19-04-2016 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal ALIDE2_RS00690 dac6e559a84f0f8d3eba15dd29537ef9 138 PANTHER PTHR34075 1 127 1.8E-36 T 19-04-2016 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 SUPERFAMILY SSF51998 257 417 3.66E-172 T 19-04-2016 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 SUPERFAMILY SSF51998 453 613 3.66E-172 T 19-04-2016 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 SUPERFAMILY SSF51998 10 213 3.66E-172 T 19-04-2016 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 PANTHER PTHR11573:SF3 19 701 9.4E-182 T 19-04-2016 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 PANTHER PTHR11573 19 701 9.4E-182 T 19-04-2016 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 PRINTS PR01183 Ribonucleotide reductase large chain signature 331 354 3.0E-24 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 PRINTS PR01183 Ribonucleotide reductase large chain signature 397 420 3.0E-24 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 PRINTS PR01183 Ribonucleotide reductase large chain signature 171 190 3.0E-24 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 PRINTS PR01183 Ribonucleotide reductase large chain signature 453 480 3.0E-24 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 PRINTS PR01183 Ribonucleotide reductase large chain signature 369 391 3.0E-24 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 Pfam PF02867 Ribonucleotide reductase, barrel domain 89 585 6.2E-138 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 Gene3D G3DSA:3.20.70.20 257 417 2.0E-129 T 19-04-2016 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 Gene3D G3DSA:3.20.70.20 6 213 2.0E-129 T 19-04-2016 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 Gene3D G3DSA:3.20.70.20 453 500 2.0E-129 T 19-04-2016 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 Gene3D G3DSA:3.20.70.20 544 589 2.0E-129 T 19-04-2016 ALIDE2_RS02300 e2f8a949a244373f881b4d21e14a2c67 811 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 21 591 3.7E-176 T 19-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS22185 52ea0c3ad7b7011e5c0436d660ad1d93 273 SUPERFAMILY SSF51735 242 272 3.36E-47 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22185 52ea0c3ad7b7011e5c0436d660ad1d93 273 SUPERFAMILY SSF51735 9 132 3.36E-47 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22185 52ea0c3ad7b7011e5c0436d660ad1d93 273 Gene3D G3DSA:3.40.50.720 8 169 1.8E-57 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22185 52ea0c3ad7b7011e5c0436d660ad1d93 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 9 271 34.391 T 19-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS22185 52ea0c3ad7b7011e5c0436d660ad1d93 273 SUPERFAMILY SSF55347 133 242 4.14E-37 T 19-04-2016 ALIDE2_RS22185 52ea0c3ad7b7011e5c0436d660ad1d93 273 PANTHER PTHR20836:SF0 10 272 4.8E-92 T 19-04-2016 ALIDE2_RS22185 52ea0c3ad7b7011e5c0436d660ad1d93 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 134 270 5.3E-42 T 19-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS22185 52ea0c3ad7b7011e5c0436d660ad1d93 273 PIRSF PIRSF000161 8 273 3.2E-85 T 19-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS22185 52ea0c3ad7b7011e5c0436d660ad1d93 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 10 270 3.0E-94 T 19-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS22185 52ea0c3ad7b7011e5c0436d660ad1d93 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 156 173 - T 19-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS22185 52ea0c3ad7b7011e5c0436d660ad1d93 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 10 131 5.1E-39 T 19-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS22185 52ea0c3ad7b7011e5c0436d660ad1d93 273 PANTHER PTHR20836 10 272 4.8E-92 T 19-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS11580 1a7792868a34b52831295c168649f562 189 PANTHER PTHR13256:SF19 4 155 6.5E-44 T 19-04-2016 ALIDE2_RS11580 1a7792868a34b52831295c168649f562 189 Pfam PF13302 Acetyltransferase (GNAT) domain 11 154 2.2E-31 T 19-04-2016 IPR000182 GNAT domain GO:0008080 ALIDE2_RS11580 1a7792868a34b52831295c168649f562 189 PANTHER PTHR13256 4 155 6.5E-44 T 19-04-2016 ALIDE2_RS11580 1a7792868a34b52831295c168649f562 189 Gene3D G3DSA:3.40.630.30 6 185 3.0E-46 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS11580 1a7792868a34b52831295c168649f562 189 SUPERFAMILY SSF55729 6 156 9.49E-37 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS18995 a7ca8663c5cac1d41d5dcf0b8845f2ea 298 SUPERFAMILY SSF53335 91 278 1.64E-34 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS18995 a7ca8663c5cac1d41d5dcf0b8845f2ea 298 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 2 291 4.0E-60 T 19-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ALIDE2_RS18995 a7ca8663c5cac1d41d5dcf0b8845f2ea 298 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 1 298 28.957 T 19-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ALIDE2_RS18995 a7ca8663c5cac1d41d5dcf0b8845f2ea 298 PANTHER PTHR18895 14 294 2.9E-65 T 19-04-2016 ALIDE2_RS18995 a7ca8663c5cac1d41d5dcf0b8845f2ea 298 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 297 1.6E-76 T 19-04-2016 ALIDE2_RS18995 a7ca8663c5cac1d41d5dcf0b8845f2ea 298 Gene3D G3DSA:3.40.50.150 106 291 1.2E-36 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS18995 a7ca8663c5cac1d41d5dcf0b8845f2ea 298 PIRSF PIRSF000401 1 298 6.0E-78 T 19-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ALIDE2_RS18995 a7ca8663c5cac1d41d5dcf0b8845f2ea 298 PANTHER PTHR18895:SF69 14 294 2.9E-65 T 19-04-2016 ALIDE2_RS15385 98cb94abfb1a442342b7f85db3fc0f3b 107 PANTHER PTHR11938:SF101 1 75 6.1E-36 T 19-04-2016 ALIDE2_RS15385 98cb94abfb1a442342b7f85db3fc0f3b 107 Gene3D G3DSA:3.30.70.20 3 46 3.6E-14 T 19-04-2016 ALIDE2_RS15385 98cb94abfb1a442342b7f85db3fc0f3b 107 SUPERFAMILY SSF54862 1 97 3.35E-23 T 19-04-2016 ALIDE2_RS15385 98cb94abfb1a442342b7f85db3fc0f3b 107 PANTHER PTHR11938 1 75 6.1E-36 T 19-04-2016 ALIDE2_RS15385 98cb94abfb1a442342b7f85db3fc0f3b 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.3E-15 T 19-04-2016 IPR000813 7Fe ferredoxin GO:0009055 ALIDE2_RS15385 98cb94abfb1a442342b7f85db3fc0f3b 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.3E-15 T 19-04-2016 IPR000813 7Fe ferredoxin GO:0009055 ALIDE2_RS15385 98cb94abfb1a442342b7f85db3fc0f3b 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.3E-15 T 19-04-2016 IPR000813 7Fe ferredoxin GO:0009055 ALIDE2_RS15385 98cb94abfb1a442342b7f85db3fc0f3b 107 Gene3D G3DSA:1.10.1060.10 47 81 3.1E-6 T 19-04-2016 ALIDE2_RS15385 98cb94abfb1a442342b7f85db3fc0f3b 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS15385 98cb94abfb1a442342b7f85db3fc0f3b 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 2.2E-17 T 19-04-2016 IPR022569 Ferredoxin, C-terminal ALIDE2_RS15385 98cb94abfb1a442342b7f85db3fc0f3b 107 Pfam PF00037 4Fe-4S binding domain 34 55 5.0E-7 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS19470 6d8a9883520e2c58a06de442a6115e40 231 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 19-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 ALIDE2_RS19470 6d8a9883520e2c58a06de442a6115e40 231 Pfam PF01144 Coenzyme A transferase 8 218 2.2E-66 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS19470 6d8a9883520e2c58a06de442a6115e40 231 SUPERFAMILY SSF100950 2 223 1.05E-76 T 19-04-2016 ALIDE2_RS19470 6d8a9883520e2c58a06de442a6115e40 231 SMART SM00882 6 219 3.8E-79 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS19470 6d8a9883520e2c58a06de442a6115e40 231 PANTHER PTHR13707 1 223 2.2E-93 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS19470 6d8a9883520e2c58a06de442a6115e40 231 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 219 1.4E-113 T 19-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 ALIDE2_RS19470 6d8a9883520e2c58a06de442a6115e40 231 Gene3D G3DSA:3.40.1080.10 4 218 8.1E-85 T 19-04-2016 ALIDE2_RS21030 854c79416069878502c6fe7e588df76f 310 PANTHER PTHR12715:SF9 18 306 3.5E-50 T 19-04-2016 ALIDE2_RS21030 854c79416069878502c6fe7e588df76f 310 SUPERFAMILY SSF103481 205 302 3.79E-11 T 19-04-2016 ALIDE2_RS21030 854c79416069878502c6fe7e588df76f 310 Pfam PF00892 EamA-like transporter family 174 301 4.4E-11 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS21030 854c79416069878502c6fe7e588df76f 310 Pfam PF00892 EamA-like transporter family 19 149 2.2E-12 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS21030 854c79416069878502c6fe7e588df76f 310 PANTHER PTHR12715 18 306 3.5E-50 T 19-04-2016 ALIDE2_RS21030 854c79416069878502c6fe7e588df76f 310 SUPERFAMILY SSF103481 60 154 1.57E-8 T 19-04-2016 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 SUPERFAMILY SSF82693 43 128 3.92E-20 T 19-04-2016 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 Gene3D G3DSA:3.30.2090.10 717 803 3.5E-15 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1029 1.6E-232 T 19-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 SUPERFAMILY SSF82714 717 800 4.84E-12 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 Pfam PF00873 AcrB/AcrD/AcrF family 8 1022 1.2E-249 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 SUPERFAMILY SSF82693 140 184 1.39E-16 T 19-04-2016 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 SUPERFAMILY SSF82693 270 319 1.39E-16 T 19-04-2016 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 Gene3D G3DSA:3.30.70.1430 44 141 1.1E-24 T 19-04-2016 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 Gene3D G3DSA:3.30.2090.10 185 266 2.9E-12 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 SUPERFAMILY SSF82866 798 1025 1.57E-47 T 19-04-2016 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 Gene3D G3DSA:1.10.3850.10 806 1025 4.8E-51 T 19-04-2016 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 Gene3D G3DSA:1.10.3850.10 278 501 4.0E-44 T 19-04-2016 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 1.3E-25 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.3E-25 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.3E-25 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 1.3E-25 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 1.3E-25 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.3E-25 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 1.3E-25 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 PANTHER PTHR32063 5 1035 0.0 T 19-04-2016 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 SUPERFAMILY SSF82714 185 266 4.71E-14 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 SUPERFAMILY SSF82693 563 656 2.51E-5 T 19-04-2016 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 PANTHER PTHR32063:SF4 5 1035 0.0 T 19-04-2016 ALIDE2_RS08305 e84a2af7100f11e7daab85b60310f22a 1039 SUPERFAMILY SSF82866 294 501 4.84E-34 T 19-04-2016 ALIDE2_RS22600 54e97f1fa37d781da0f7028adbb327c3 573 PANTHER PTHR30193:SF3 15 292 3.8E-73 T 19-04-2016 ALIDE2_RS22600 54e97f1fa37d781da0f7028adbb327c3 573 Gene3D G3DSA:1.10.3720.10 28 285 6.4E-43 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS22600 54e97f1fa37d781da0f7028adbb327c3 573 Gene3D G3DSA:1.10.3720.10 306 558 5.7E-30 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS22600 54e97f1fa37d781da0f7028adbb327c3 573 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 23 569 9.3E-241 T 19-04-2016 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative ALIDE2_RS22600 54e97f1fa37d781da0f7028adbb327c3 573 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 377 555 1.4E-6 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS22600 54e97f1fa37d781da0f7028adbb327c3 573 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 285 5.6E-11 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS22600 54e97f1fa37d781da0f7028adbb327c3 573 SUPERFAMILY SSF161098 311 553 6.67E-35 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS22600 54e97f1fa37d781da0f7028adbb327c3 573 PANTHER PTHR30193 15 292 3.8E-73 T 19-04-2016 ALIDE2_RS22600 54e97f1fa37d781da0f7028adbb327c3 573 SUPERFAMILY SSF161098 22 277 6.35E-45 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS10560 214b1281a068cd889d31a05069dfff7a 331 Gene3D G3DSA:3.40.50.1400 5 205 1.3E-67 T 19-04-2016 ALIDE2_RS10560 214b1281a068cd889d31a05069dfff7a 331 SUPERFAMILY SSF53800 4 330 3.11E-104 T 19-04-2016 ALIDE2_RS10560 214b1281a068cd889d31a05069dfff7a 331 PANTHER PTHR11108 1 325 1.2E-117 T 19-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 ALIDE2_RS10560 214b1281a068cd889d31a05069dfff7a 331 Pfam PF00762 Ferrochelatase 6 324 7.7E-111 T 19-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 ALIDE2_RS10560 214b1281a068cd889d31a05069dfff7a 331 ProSitePatterns PS00534 Ferrochelatase signature. 194 213 - T 19-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 ALIDE2_RS10560 214b1281a068cd889d31a05069dfff7a 331 Gene3D G3DSA:3.40.50.1400 206 326 4.2E-35 T 19-04-2016 ALIDE2_RS10560 214b1281a068cd889d31a05069dfff7a 331 TIGRFAM TIGR00109 hemH: ferrochelatase 4 323 1.5E-90 T 19-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 ALIDE2_RS10560 214b1281a068cd889d31a05069dfff7a 331 Hamap MF_00323 Ferrochelatase [hemH]. 4 325 37.074 T 19-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 ALIDE2_RS00705 5ce2236d78d0688bb6538caa6fa15834 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 416 494 3.9E-20 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS00705 5ce2236d78d0688bb6538caa6fa15834 513 Gene3D G3DSA:3.40.50.980 4 165 1.2E-26 T 19-04-2016 ALIDE2_RS00705 5ce2236d78d0688bb6538caa6fa15834 513 SUPERFAMILY SSF56801 4 507 4.71E-118 T 19-04-2016 ALIDE2_RS00705 5ce2236d78d0688bb6538caa6fa15834 513 Gene3D G3DSA:3.30.300.30 405 506 2.2E-27 T 19-04-2016 ALIDE2_RS00705 5ce2236d78d0688bb6538caa6fa15834 513 Gene3D G3DSA:3.40.50.980 166 327 1.2E-34 T 19-04-2016 ALIDE2_RS00705 5ce2236d78d0688bb6538caa6fa15834 513 PANTHER PTHR24096 11 506 1.4E-193 T 19-04-2016 ALIDE2_RS00705 5ce2236d78d0688bb6538caa6fa15834 513 Pfam PF00501 AMP-binding enzyme 5 407 2.1E-69 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS00705 5ce2236d78d0688bb6538caa6fa15834 513 Gene3D G3DSA:2.30.38.10 335 400 3.0E-12 T 19-04-2016 ALIDE2_RS00705 5ce2236d78d0688bb6538caa6fa15834 513 PANTHER PTHR24096:SF106 11 506 1.4E-193 T 19-04-2016 ALIDE2_RS02810 eb01cd6d746c6ca5e4b229d812624cea 600 SUPERFAMILY SSF48208 209 596 7.11E-88 T 19-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 ALIDE2_RS02810 eb01cd6d746c6ca5e4b229d812624cea 600 PANTHER PTHR31616:SF2 12 600 2.0E-146 T 19-04-2016 ALIDE2_RS02810 eb01cd6d746c6ca5e4b229d812624cea 600 Pfam PF00723 Glycosyl hydrolases family 15 226 535 8.5E-29 T 19-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 ALIDE2_RS02810 eb01cd6d746c6ca5e4b229d812624cea 600 PANTHER PTHR31616 12 600 2.0E-146 T 19-04-2016 ALIDE2_RS02810 eb01cd6d746c6ca5e4b229d812624cea 600 Gene3D G3DSA:1.50.10.10 223 596 7.1E-77 T 19-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 ALIDE2_RS11975 239656c449e783526fa8bc06b2818d6e 242 Gene3D G3DSA:3.30.420.10 3 174 1.8E-61 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS11975 239656c449e783526fa8bc06b2818d6e 242 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 3 232 4.0E-88 T 19-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS11975 239656c449e783526fa8bc06b2818d6e 242 Pfam PF00929 Exonuclease 5 166 2.8E-35 T 19-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ALIDE2_RS11975 239656c449e783526fa8bc06b2818d6e 242 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 182 1.2E-60 T 19-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS11975 239656c449e783526fa8bc06b2818d6e 242 PANTHER PTHR30231:SF0 3 238 2.2E-93 T 19-04-2016 ALIDE2_RS11975 239656c449e783526fa8bc06b2818d6e 242 SUPERFAMILY SSF53098 3 176 1.17E-52 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS11975 239656c449e783526fa8bc06b2818d6e 242 PANTHER PTHR30231 3 238 2.2E-93 T 19-04-2016 ALIDE2_RS11975 239656c449e783526fa8bc06b2818d6e 242 SMART SM00479 3 175 7.8E-47 T 19-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ALIDE2_RS03025 cec7f8586c413c4a52c59b694b05fa23 292 Pfam PF04321 RmlD substrate binding domain 1 291 2.7E-109 T 19-04-2016 IPR029903 RmlD-like substrate binding domain ALIDE2_RS03025 cec7f8586c413c4a52c59b694b05fa23 292 SUPERFAMILY SSF51735 1 291 2.25E-99 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03025 cec7f8586c413c4a52c59b694b05fa23 292 PANTHER PTHR10491:SF4 1 292 1.6E-96 T 19-04-2016 ALIDE2_RS03025 cec7f8586c413c4a52c59b694b05fa23 292 PANTHER PTHR10491 1 292 1.6E-96 T 19-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family ALIDE2_RS03025 cec7f8586c413c4a52c59b694b05fa23 292 Gene3D G3DSA:3.40.50.720 1 230 6.2E-57 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03025 cec7f8586c413c4a52c59b694b05fa23 292 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 290 1.9E-100 T 19-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family ALIDE2_RS14100 f87285c27e4fb9dc8953ce3f31fd10cf 136 PANTHER PTHR30558 10 136 6.9E-37 T 19-04-2016 ALIDE2_RS14100 f87285c27e4fb9dc8953ce3f31fd10cf 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 9.4E-33 T 19-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06960 0084078c1755a90c08173a95afea4f62 328 PIRSF PIRSF017082 3 328 7.4E-83 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS06960 0084078c1755a90c08173a95afea4f62 328 SUPERFAMILY SSF53850 116 290 1.0E-11 T 19-04-2016 ALIDE2_RS06960 0084078c1755a90c08173a95afea4f62 328 PANTHER PTHR30349:SF16 11 321 1.2E-83 T 19-04-2016 ALIDE2_RS06960 0084078c1755a90c08173a95afea4f62 328 PANTHER PTHR30349 11 321 1.2E-83 T 19-04-2016 ALIDE2_RS06960 0084078c1755a90c08173a95afea4f62 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 324 5.2E-76 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS20340 f552846675ddfcfd0e9fec642dc5793b 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 256 3.6E-68 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS20340 f552846675ddfcfd0e9fec642dc5793b 260 SUPERFAMILY SSF52096 1 257 6.26E-77 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS20340 f552846675ddfcfd0e9fec642dc5793b 260 TIGRFAM TIGR03210 badI: 2-ketocyclohexanecarboxyl-CoA hydrolase 3 258 2.5E-161 T 19-04-2016 IPR017623 2-ketocyclohexanecarboxyl-CoA hydrolase ALIDE2_RS20340 f552846675ddfcfd0e9fec642dc5793b 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS20340 f552846675ddfcfd0e9fec642dc5793b 260 PANTHER PTHR11941:SF20 2 255 2.1E-109 T 19-04-2016 ALIDE2_RS20340 f552846675ddfcfd0e9fec642dc5793b 260 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 1 260 41.227 T 19-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 ALIDE2_RS20340 f552846675ddfcfd0e9fec642dc5793b 260 PANTHER PTHR11941 2 255 2.1E-109 T 19-04-2016 ALIDE2_RS20340 f552846675ddfcfd0e9fec642dc5793b 260 Gene3D G3DSA:1.10.12.10 201 250 1.2E-16 T 19-04-2016 IPR014748 Crontonase, C-terminal ALIDE2_RS20340 f552846675ddfcfd0e9fec642dc5793b 260 Gene3D G3DSA:3.90.226.10 1 198 1.3E-63 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS19525 da79f9d4608c518d6ac6925c30d56461 392 PANTHER PTHR30349 1 169 8.7E-39 T 19-04-2016 ALIDE2_RS19525 da79f9d4608c518d6ac6925c30d56461 392 Pfam PF04303 PrpF protein 8 385 3.6E-107 T 19-04-2016 IPR007400 PrpF protein ALIDE2_RS19525 da79f9d4608c518d6ac6925c30d56461 392 Gene3D G3DSA:3.10.310.10 4 182 4.3E-65 T 19-04-2016 ALIDE2_RS19525 da79f9d4608c518d6ac6925c30d56461 392 PANTHER PTHR30349:SF21 1 169 8.7E-39 T 19-04-2016 ALIDE2_RS19525 da79f9d4608c518d6ac6925c30d56461 392 SUPERFAMILY SSF54506 176 389 1.88E-51 T 19-04-2016 ALIDE2_RS19525 da79f9d4608c518d6ac6925c30d56461 392 Gene3D G3DSA:3.10.310.10 183 362 2.3E-53 T 19-04-2016 ALIDE2_RS19525 da79f9d4608c518d6ac6925c30d56461 392 SUPERFAMILY SSF54506 6 171 4.24E-54 T 19-04-2016 ALIDE2_RS07480 bd20e87d005ae201d133d40901da25ed 166 SUPERFAMILY SSF54637 7 148 3.92E-36 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS07480 bd20e87d005ae201d133d40901da25ed 166 Pfam PF01575 MaoC like domain 24 118 6.1E-21 T 19-04-2016 IPR002539 MaoC-like domain ALIDE2_RS07480 bd20e87d005ae201d133d40901da25ed 166 Gene3D G3DSA:3.10.129.10 9 148 5.7E-39 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS07480 bd20e87d005ae201d133d40901da25ed 166 PANTHER PTHR13078 4 147 5.6E-30 T 19-04-2016 ALIDE2_RS22200 a5ebbac119cf9dbb76328fc66f36a287 317 Gene3D G3DSA:3.40.50.300 142 313 1.1E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22200 a5ebbac119cf9dbb76328fc66f36a287 317 PANTHER PTHR30305:SF1 43 313 4.2E-86 T 19-04-2016 ALIDE2_RS22200 a5ebbac119cf9dbb76328fc66f36a287 317 SUPERFAMILY SSF53795 140 308 1.01E-33 T 19-04-2016 ALIDE2_RS22200 a5ebbac119cf9dbb76328fc66f36a287 317 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 15 311 8.9E-98 T 19-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 ALIDE2_RS22200 a5ebbac119cf9dbb76328fc66f36a287 317 PANTHER PTHR30305 43 313 4.2E-86 T 19-04-2016 ALIDE2_RS22200 a5ebbac119cf9dbb76328fc66f36a287 317 Gene3D G3DSA:3.40.1390.20 5 140 9.3E-35 T 19-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like ALIDE2_RS22200 a5ebbac119cf9dbb76328fc66f36a287 317 Pfam PF07475 HPr Serine kinase C-terminal domain 138 307 1.9E-62 T 19-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 ALIDE2_RS22200 a5ebbac119cf9dbb76328fc66f36a287 317 SUPERFAMILY SSF75138 10 139 3.4E-31 T 19-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like ALIDE2_RS22200 a5ebbac119cf9dbb76328fc66f36a287 317 Pfam PF02603 HPr Serine kinase N terminus 11 135 4.3E-22 T 19-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 ALIDE2_RS22200 a5ebbac119cf9dbb76328fc66f36a287 317 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 5 315 36.287 T 19-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 ALIDE2_RS04750 4d929bac05fe3db945b8d9d171c7e8c7 352 SUPERFAMILY SSF48150 9 230 1.26E-72 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 ALIDE2_RS04750 4d929bac05fe3db945b8d9d171c7e8c7 352 Pfam PF14815 NUDIX domain 240 350 6.2E-19 T 19-04-2016 IPR029119 MutY, C-terminal ALIDE2_RS04750 4d929bac05fe3db945b8d9d171c7e8c7 352 PANTHER PTHR10359 10 308 9.3E-80 T 19-04-2016 ALIDE2_RS04750 4d929bac05fe3db945b8d9d171c7e8c7 352 Pfam PF00633 Helix-hairpin-helix motif 102 130 1.2E-8 T 19-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 ALIDE2_RS04750 4d929bac05fe3db945b8d9d171c7e8c7 352 Gene3D G3DSA:1.10.340.30 24 124 1.4E-46 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 ALIDE2_RS04750 4d929bac05fe3db945b8d9d171c7e8c7 352 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 169 9.0E-20 T 19-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 ALIDE2_RS04750 4d929bac05fe3db945b8d9d171c7e8c7 352 Gene3D G3DSA:1.10.1670.10 125 230 7.6E-37 T 19-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal ALIDE2_RS04750 4d929bac05fe3db945b8d9d171c7e8c7 352 SMART SM00525 197 217 0.0048 T 19-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 ALIDE2_RS04750 4d929bac05fe3db945b8d9d171c7e8c7 352 SUPERFAMILY SSF55811 226 352 1.26E-19 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS04750 4d929bac05fe3db945b8d9d171c7e8c7 352 SMART SM00478 41 196 3.2E-48 T 19-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 ALIDE2_RS04750 4d929bac05fe3db945b8d9d171c7e8c7 352 Gene3D G3DSA:3.90.79.10 238 352 1.3E-14 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS04750 4d929bac05fe3db945b8d9d171c7e8c7 352 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 9 277 2.2E-101 T 19-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 ALIDE2_RS14120 d7402e607293d435171833679df08f0d 167 PANTHER PTHR33164 1 167 2.5E-21 T 19-04-2016 ALIDE2_RS14120 d7402e607293d435171833679df08f0d 167 Gene3D G3DSA:1.10.10.10 15 158 1.0E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14120 d7402e607293d435171833679df08f0d 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 99 5.6E-12 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ALIDE2_RS14120 d7402e607293d435171833679df08f0d 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 83 5.6E-12 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ALIDE2_RS14120 d7402e607293d435171833679df08f0d 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 103 119 5.6E-12 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ALIDE2_RS14120 d7402e607293d435171833679df08f0d 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 133 153 5.6E-12 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ALIDE2_RS14120 d7402e607293d435171833679df08f0d 167 Pfam PF01047 MarR family 50 107 2.9E-7 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ALIDE2_RS14120 d7402e607293d435171833679df08f0d 167 SUPERFAMILY SSF46785 22 158 8.3E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14120 d7402e607293d435171833679df08f0d 167 SMART SM00347 41 143 2.4E-17 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ALIDE2_RS18285 e8e8d1b72d97c60612209156a3fd155b 173 Gene3D G3DSA:3.40.630.30 3 168 4.8E-43 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS18285 e8e8d1b72d97c60612209156a3fd155b 173 PANTHER PTHR23091:SF187 3 164 6.0E-37 T 19-04-2016 ALIDE2_RS18285 e8e8d1b72d97c60612209156a3fd155b 173 SUPERFAMILY SSF55729 3 165 1.24E-32 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS18285 e8e8d1b72d97c60612209156a3fd155b 173 Pfam PF13420 Acetyltransferase (GNAT) domain 4 157 1.3E-22 T 19-04-2016 ALIDE2_RS18285 e8e8d1b72d97c60612209156a3fd155b 173 PANTHER PTHR23091 3 164 6.0E-37 T 19-04-2016 ALIDE2_RS03290 85b7e48ded80658bea7551f5eea3a555 297 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 284 38.425 T 19-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 ALIDE2_RS03290 85b7e48ded80658bea7551f5eea3a555 297 SUPERFAMILY SSF53335 9 293 1.24E-82 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS03290 85b7e48ded80658bea7551f5eea3a555 297 Gene3D G3DSA:3.40.50.150 1 293 2.6E-115 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS03290 85b7e48ded80658bea7551f5eea3a555 297 PANTHER PTHR37426:SF1 2 293 8.1E-94 T 19-04-2016 ALIDE2_RS03290 85b7e48ded80658bea7551f5eea3a555 297 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 293 6.5E-66 T 19-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 ALIDE2_RS03290 85b7e48ded80658bea7551f5eea3a555 297 PANTHER PTHR37426 2 293 8.1E-94 T 19-04-2016 ALIDE2_RS18390 6b8121c1253667ea47116cb80ef36d28 77 PANTHER PTHR13528 1 74 1.8E-36 T 19-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 ALIDE2_RS18390 6b8121c1253667ea47116cb80ef36d28 77 SUPERFAMILY SSF143800 2 75 1.45E-31 T 19-04-2016 ALIDE2_RS18390 6b8121c1253667ea47116cb80ef36d28 77 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 22.228 T 19-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18390 6b8121c1253667ea47116cb80ef36d28 77 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 5.3E-29 T 19-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18390 6b8121c1253667ea47116cb80ef36d28 77 Pfam PF00830 Ribosomal L28 family 3 62 1.7E-29 T 19-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 ALIDE2_RS18390 6b8121c1253667ea47116cb80ef36d28 77 Gene3D G3DSA:2.30.170.40 2 75 3.0E-38 T 19-04-2016 ALIDE2_RS06885 908fbcd0820d568f7f2ab63ccf247bf2 268 SUPERFAMILY SSF52172 3 134 8.68E-26 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS06885 908fbcd0820d568f7f2ab63ccf247bf2 268 Pfam PF00072 Response regulator receiver domain 6 119 1.3E-16 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS06885 908fbcd0820d568f7f2ab63ccf247bf2 268 PANTHER PTHR26402:SF524 3 125 3.9E-30 T 19-04-2016 ALIDE2_RS06885 908fbcd0820d568f7f2ab63ccf247bf2 268 PANTHER PTHR26402 3 125 3.9E-30 T 19-04-2016 ALIDE2_RS06885 908fbcd0820d568f7f2ab63ccf247bf2 268 Pfam PF04397 LytTr DNA-binding domain 173 267 5.4E-24 T 19-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 ALIDE2_RS06885 908fbcd0820d568f7f2ab63ccf247bf2 268 SMART SM00448 3 120 2.5E-20 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS06885 908fbcd0820d568f7f2ab63ccf247bf2 268 SMART SM00850 172 268 2.4E-27 T 19-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 ALIDE2_RS06885 908fbcd0820d568f7f2ab63ccf247bf2 268 Gene3D G3DSA:3.40.50.2300 3 130 4.5E-24 T 19-04-2016 ALIDE2_RS06885 908fbcd0820d568f7f2ab63ccf247bf2 268 Gene3D G3DSA:2.40.50.40 164 229 3.4E-16 T 19-04-2016 ALIDE2_RS22020 a75e977047de4f2ed07c6c44bf8d3f38 212 SUPERFAMILY SSF46894 129 205 2.89E-19 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS22020 a75e977047de4f2ed07c6c44bf8d3f38 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS22020 a75e977047de4f2ed07c6c44bf8d3f38 212 Gene3D G3DSA:3.40.50.2300 4 123 8.0E-27 T 19-04-2016 ALIDE2_RS22020 a75e977047de4f2ed07c6c44bf8d3f38 212 PANTHER PTHR26402 4 203 7.3E-66 T 19-04-2016 ALIDE2_RS22020 a75e977047de4f2ed07c6c44bf8d3f38 212 SUPERFAMILY SSF52172 1 153 3.13E-25 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS22020 a75e977047de4f2ed07c6c44bf8d3f38 212 SMART SM00421 146 203 4.4E-21 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS22020 a75e977047de4f2ed07c6c44bf8d3f38 212 PANTHER PTHR26402:SF474 4 203 7.3E-66 T 19-04-2016 ALIDE2_RS22020 a75e977047de4f2ed07c6c44bf8d3f38 212 Gene3D G3DSA:1.10.10.10 124 203 4.1E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22020 a75e977047de4f2ed07c6c44bf8d3f38 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 7.8E-11 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS22020 a75e977047de4f2ed07c6c44bf8d3f38 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 7.8E-11 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS22020 a75e977047de4f2ed07c6c44bf8d3f38 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 7.8E-11 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS22020 a75e977047de4f2ed07c6c44bf8d3f38 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 7.3E-18 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS22020 a75e977047de4f2ed07c6c44bf8d3f38 212 Pfam PF00072 Response regulator receiver domain 7 116 7.2E-17 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS22020 a75e977047de4f2ed07c6c44bf8d3f38 212 SMART SM00448 4 118 2.5E-16 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS03485 d3e113f9ae0303582fadc4654cd92087 384 SUPERFAMILY SSF53756 1 374 2.72E-60 T 19-04-2016 ALIDE2_RS03485 d3e113f9ae0303582fadc4654cd92087 384 Pfam PF00534 Glycosyl transferases group 1 203 358 1.8E-16 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 ALIDE2_RS03485 d3e113f9ae0303582fadc4654cd92087 384 Pfam PF13579 Glycosyl transferase 4-like domain 14 181 1.9E-26 T 19-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ALIDE2_RS03485 d3e113f9ae0303582fadc4654cd92087 384 PANTHER PTHR12526 1 68 3.7E-40 T 19-04-2016 ALIDE2_RS03485 d3e113f9ae0303582fadc4654cd92087 384 PANTHER PTHR12526 88 358 3.7E-40 T 19-04-2016 ALIDE2_RS03485 d3e113f9ae0303582fadc4654cd92087 384 Gene3D G3DSA:3.40.50.2000 166 357 9.4E-19 T 19-04-2016 ALIDE2_RS06685 3c1870d48570d88468a310a0b403dab7 417 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 89 98 - T 19-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 ALIDE2_RS06685 3c1870d48570d88468a310a0b403dab7 417 Gene3D G3DSA:3.30.70.360 205 306 3.0E-29 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS06685 3c1870d48570d88468a310a0b403dab7 417 Pfam PF07687 Peptidase dimerisation domain 192 300 9.5E-20 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS06685 3c1870d48570d88468a310a0b403dab7 417 Pfam PF01546 Peptidase family M20/M25/M40 90 413 1.9E-26 T 19-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 ALIDE2_RS06685 3c1870d48570d88468a310a0b403dab7 417 PANTHER PTHR11014 5 417 5.2E-55 T 19-04-2016 ALIDE2_RS06685 3c1870d48570d88468a310a0b403dab7 417 SUPERFAMILY SSF55031 196 306 7.98E-24 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS06685 3c1870d48570d88468a310a0b403dab7 417 Gene3D G3DSA:3.40.630.10 353 416 6.9E-48 T 19-04-2016 ALIDE2_RS06685 3c1870d48570d88468a310a0b403dab7 417 Gene3D G3DSA:3.40.630.10 12 204 6.9E-48 T 19-04-2016 ALIDE2_RS06685 3c1870d48570d88468a310a0b403dab7 417 SUPERFAMILY SSF53187 329 416 1.04E-52 T 19-04-2016 ALIDE2_RS06685 3c1870d48570d88468a310a0b403dab7 417 SUPERFAMILY SSF53187 4 195 1.04E-52 T 19-04-2016 ALIDE2_RS11430 8d4683c3516806d1ce3be9ead2c3bd5a 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 327 1.7E-84 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS11430 8d4683c3516806d1ce3be9ead2c3bd5a 330 PIRSF PIRSF017082 4 330 1.0E-80 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS11430 8d4683c3516806d1ce3be9ead2c3bd5a 330 SUPERFAMILY SSF53850 120 290 1.19E-8 T 19-04-2016 ALIDE2_RS11430 8d4683c3516806d1ce3be9ead2c3bd5a 330 PANTHER PTHR30349:SF16 7 327 1.8E-98 T 19-04-2016 ALIDE2_RS11430 8d4683c3516806d1ce3be9ead2c3bd5a 330 PANTHER PTHR30349 7 327 1.8E-98 T 19-04-2016 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 ProSitePatterns PS01016 Glycoprotease family signature. 103 123 - T 19-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 SUPERFAMILY SSF53067 108 316 4.53E-42 T 19-04-2016 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 5 321 9.5E-130 T 19-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 Pfam PF00814 Glycoprotease family 31 314 2.8E-99 T 19-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 SUPERFAMILY SSF53067 4 129 3.88E-27 T 19-04-2016 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 3 342 62.506 T 19-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 83 103 3.2E-49 T 19-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 6 19 3.2E-49 T 19-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 271 280 3.2E-49 T 19-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 138 150 3.2E-49 T 19-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 104 123 3.2E-49 T 19-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 161 182 3.2E-49 T 19-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 PANTHER PTHR11735 2 345 1.6E-147 T 19-04-2016 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 PANTHER PTHR11735:SF6 2 345 1.6E-147 T 19-04-2016 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 6 314 2.5E-111 T 19-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ALIDE2_RS12855 ab7087f9db6bd91932bee0a09b899d92 347 Gene3D G3DSA:3.30.420.40 4 166 1.2E-45 T 19-04-2016 ALIDE2_RS06310 6416e1f3f7dc3517974c632e0e00cf95 414 SUPERFAMILY SSF53901 4 256 4.9E-81 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS06310 6416e1f3f7dc3517974c632e0e00cf95 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 159 175 - T 19-04-2016 IPR018201 Beta-ketoacyl synthase, active site ALIDE2_RS06310 6416e1f3f7dc3517974c632e0e00cf95 414 Gene3D G3DSA:3.40.47.10 267 413 8.2E-59 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS06310 6416e1f3f7dc3517974c632e0e00cf95 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 1.7E-198 T 19-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 ALIDE2_RS06310 6416e1f3f7dc3517974c632e0e00cf95 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 259 371 3.8E-37 T 19-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal ALIDE2_RS06310 6416e1f3f7dc3517974c632e0e00cf95 414 SUPERFAMILY SSF53901 218 413 8.06E-72 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS06310 6416e1f3f7dc3517974c632e0e00cf95 414 Gene3D G3DSA:3.40.47.10 3 262 1.8E-82 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS06310 6416e1f3f7dc3517974c632e0e00cf95 414 SMART SM00825 Beta-ketoacyl synthase 6 414 6.0E-19 T 19-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ALIDE2_RS06310 6416e1f3f7dc3517974c632e0e00cf95 414 PANTHER PTHR11712 1 413 5.4E-216 T 19-04-2016 ALIDE2_RS06310 6416e1f3f7dc3517974c632e0e00cf95 414 PIRSF PIRSF000447 1 414 5.6E-186 T 19-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 ALIDE2_RS06310 6416e1f3f7dc3517974c632e0e00cf95 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 251 3.3E-62 T 19-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal ALIDE2_RS08635 3b12de109d9e5bf49a729472936fb837 389 PANTHER PTHR30294:SF17 19 359 1.0E-107 T 19-04-2016 ALIDE2_RS08635 3b12de109d9e5bf49a729472936fb837 389 PANTHER PTHR30294 19 359 1.0E-107 T 19-04-2016 ALIDE2_RS08635 3b12de109d9e5bf49a729472936fb837 389 Pfam PF12698 ABC-2 family transporter protein 42 380 1.7E-42 T 19-04-2016 ALIDE2_RS18205 b101e1344f924f3e273d15ceb8c580ee 308 Pfam PF03466 LysR substrate binding domain 89 295 9.3E-40 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS18205 b101e1344f924f3e273d15ceb8c580ee 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.2E-16 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS18205 b101e1344f924f3e273d15ceb8c580ee 308 PANTHER PTHR30419 1 295 6.1E-102 T 19-04-2016 ALIDE2_RS18205 b101e1344f924f3e273d15ceb8c580ee 308 Gene3D G3DSA:3.40.190.10 178 264 4.4E-18 T 19-04-2016 ALIDE2_RS18205 b101e1344f924f3e273d15ceb8c580ee 308 PANTHER PTHR30419:SF2 1 295 6.1E-102 T 19-04-2016 ALIDE2_RS18205 b101e1344f924f3e273d15ceb8c580ee 308 SUPERFAMILY SSF46785 1 113 2.88E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18205 b101e1344f924f3e273d15ceb8c580ee 308 Gene3D G3DSA:1.10.10.10 2 83 4.0E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18205 b101e1344f924f3e273d15ceb8c580ee 308 Gene3D G3DSA:3.40.190.10 91 177 6.1E-19 T 19-04-2016 ALIDE2_RS18205 b101e1344f924f3e273d15ceb8c580ee 308 SUPERFAMILY SSF53850 90 300 1.9E-41 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 156 166 - T 19-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 476 497 2.5E-68 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 568 588 2.5E-68 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 546 561 2.5E-68 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 323 2.5E-68 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 170 2.5E-68 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 272 2.5E-68 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 440 2.5E-68 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 122 144 2.5E-68 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 390 404 2.5E-68 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 SUPERFAMILY SSF51230 2 96 5.76E-24 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 19-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 121 599 2.4E-137 T 19-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 SUPERFAMILY SSF55424 476 603 8.08E-37 T 19-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 Gene3D G3DSA:3.50.50.60 279 396 8.5E-25 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 480 593 2.4E-31 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 278 3.7E-37 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 123 142 3.7E-37 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 316 3.7E-37 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 389 405 3.7E-37 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 418 440 3.7E-37 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 Pfam PF00364 Biotin-requiring enzyme 5 76 7.1E-23 T 19-04-2016 IPR000089 Biotin/lipoyl attachment ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 SUPERFAMILY SSF51905 118 464 1.17E-50 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 Gene3D G3DSA:2.40.50.100 4 80 1.4E-21 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 Gene3D G3DSA:3.50.50.60 120 271 1.5E-65 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 Gene3D G3DSA:3.50.50.60 397 464 1.5E-65 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 122 453 8.5E-55 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PANTHER PTHR22912:SF160 107 236 7.2E-235 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PANTHER PTHR22912:SF160 258 597 7.2E-235 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 Gene3D G3DSA:3.30.390.30 475 598 6.9E-45 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PANTHER PTHR22912 107 236 7.2E-235 T 19-04-2016 ALIDE2_RS12055 06c938830effbeb5cb176ca0b9393ba4 609 PANTHER PTHR22912 258 597 7.2E-235 T 19-04-2016 ALIDE2_RS13940 67af1aa698054aebd6dd0d77aba3fd94 214 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 30 145 3.2E-22 T 19-04-2016 IPR014118 Type IV conjugative transfer system protein TraV ALIDE2_RS09635 00e7af63992cbb72a84aaa5609105a66 572 Gene3D G3DSA:1.10.10.60 106 171 2.7E-12 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS09635 00e7af63992cbb72a84aaa5609105a66 572 SUPERFAMILY SSF53098 183 380 3.95E-19 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS09635 00e7af63992cbb72a84aaa5609105a66 572 Pfam PF09299 Mu transposase, C-terminal 405 467 1.3E-12 T 19-04-2016 IPR015378 Transposase-like, Mu, C-terminal ALIDE2_RS09635 00e7af63992cbb72a84aaa5609105a66 572 Pfam PF13518 Helix-turn-helix domain 38 84 2.0E-8 T 19-04-2016 ALIDE2_RS09635 00e7af63992cbb72a84aaa5609105a66 572 Pfam PF00665 Integrase core domain 186 324 1.8E-22 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS09635 00e7af63992cbb72a84aaa5609105a66 572 Gene3D G3DSA:3.30.420.10 188 385 2.5E-25 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS02825 e7abf0c9b291645bb9e59c2e22ae7cbf 415 Pfam PF01966 HD domain 233 331 4.0E-8 T 19-04-2016 IPR006674 HD domain ALIDE2_RS02825 e7abf0c9b291645bb9e59c2e22ae7cbf 415 SUPERFAMILY SSF81891 124 361 5.62E-53 T 19-04-2016 ALIDE2_RS02825 e7abf0c9b291645bb9e59c2e22ae7cbf 415 SUPERFAMILY SSF81301 1 123 3.16E-29 T 19-04-2016 ALIDE2_RS02825 e7abf0c9b291645bb9e59c2e22ae7cbf 415 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 151 213 6.0E-12 T 19-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain ALIDE2_RS02825 e7abf0c9b291645bb9e59c2e22ae7cbf 415 Gene3D G3DSA:1.10.3090.10 126 361 2.2E-54 T 19-04-2016 ALIDE2_RS02825 e7abf0c9b291645bb9e59c2e22ae7cbf 415 Pfam PF01743 Poly A polymerase head domain 3 126 6.0E-18 T 19-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 ALIDE2_RS02825 e7abf0c9b291645bb9e59c2e22ae7cbf 415 PANTHER PTHR13734 1 238 8.8E-65 T 19-04-2016 ALIDE2_RS02825 e7abf0c9b291645bb9e59c2e22ae7cbf 415 Gene3D G3DSA:3.30.460.10 1 125 3.7E-30 T 19-04-2016 ALIDE2_RS02825 e7abf0c9b291645bb9e59c2e22ae7cbf 415 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 413 51.719 T 19-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 ALIDE2_RS02825 e7abf0c9b291645bb9e59c2e22ae7cbf 415 PIRSF PIRSF000813 1 414 5.9E-185 T 19-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 SUPERFAMILY SSF55785 419 538 9.68E-5 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 Gene3D G3DSA:3.30.565.10 612 767 1.2E-38 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 PIRSF PIRSF037347 3 768 2.2E-186 T 19-04-2016 IPR017181 Signal transduction histidine kinase, CHASE2/PAS sensor domain-containing, predicted ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 SUPERFAMILY SSF47384 535 606 7.85E-8 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 SMART SM01080 37 320 1.6E-68 T 19-04-2016 IPR007890 CHASE2 ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 656 765 5.4E-20 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 PANTHER PTHR24423 34 45 4.6E-62 T 19-04-2016 ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 PANTHER PTHR24423 414 768 4.6E-62 T 19-04-2016 ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 Gene3D G3DSA:1.10.287.130 538 605 1.5E-6 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 710 720 1.1E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 727 745 1.1E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 692 706 1.1E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 751 764 1.1E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 Gene3D G3DSA:3.30.450.20 429 481 1.7E-4 T 19-04-2016 ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 SMART SM00387 655 767 2.4E-33 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 Pfam PF05226 CHASE2 domain 24 317 7.4E-51 T 19-04-2016 IPR007890 CHASE2 ALIDE2_RS05450 d4541b5d029adcfcbeedee7bf01cab6a 768 SUPERFAMILY SSF55874 609 765 2.1E-38 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20350 01ceb515335f4ff4bf966bab6f6ded83 551 PANTHER PTHR24096 21 540 1.1E-129 T 19-04-2016 ALIDE2_RS20350 01ceb515335f4ff4bf966bab6f6ded83 551 Gene3D G3DSA:2.30.38.10 369 441 2.8E-20 T 19-04-2016 ALIDE2_RS20350 01ceb515335f4ff4bf966bab6f6ded83 551 Gene3D G3DSA:3.40.50.980 208 359 1.2E-35 T 19-04-2016 ALIDE2_RS20350 01ceb515335f4ff4bf966bab6f6ded83 551 TIGRFAM TIGR03208 cyc_hxne_CoA_lg: cyclohexanecarboxylate-CoA ligase 3 540 1.1E-292 T 19-04-2016 IPR017621 Cyclohexanecarboxylate-CoA ligase ALIDE2_RS20350 01ceb515335f4ff4bf966bab6f6ded83 551 Gene3D G3DSA:3.30.300.30 442 542 1.5E-27 T 19-04-2016 ALIDE2_RS20350 01ceb515335f4ff4bf966bab6f6ded83 551 Gene3D G3DSA:3.40.50.980 24 207 1.0E-34 T 19-04-2016 ALIDE2_RS20350 01ceb515335f4ff4bf966bab6f6ded83 551 Pfam PF13193 AMP-binding enzyme C-terminal domain 456 532 1.7E-12 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS20350 01ceb515335f4ff4bf966bab6f6ded83 551 ProSitePatterns PS00455 Putative AMP-binding domain signature. 202 213 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS20350 01ceb515335f4ff4bf966bab6f6ded83 551 SUPERFAMILY SSF56801 22 544 2.62E-138 T 19-04-2016 ALIDE2_RS20350 01ceb515335f4ff4bf966bab6f6ded83 551 Pfam PF00501 AMP-binding enzyme 34 447 4.9E-93 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 Pfam PF03453 MoeA N-terminal region (domain I and II) 30 184 2.3E-33 T 19-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 Gene3D G3DSA:2.170.190.11 62 158 8.7E-22 T 19-04-2016 ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 Gene3D G3DSA:3.90.105.10 159 179 2.3E-18 T 19-04-2016 ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 Gene3D G3DSA:3.90.105.10 39 61 2.3E-18 T 19-04-2016 ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 SUPERFAMILY SSF53218 192 301 1.83E-41 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 SUPERFAMILY SSF53218 335 368 1.83E-41 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 Pfam PF00994 Probable molybdopterin binding domain 199 361 1.7E-28 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 SUPERFAMILY SSF63867 372 451 6.41E-26 T 19-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 Gene3D G3DSA:2.40.340.10 376 446 1.1E-31 T 19-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 SMART SM00852 197 363 2.6E-45 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 SUPERFAMILY SSF63882 22 193 3.66E-46 T 19-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 Gene3D G3DSA:3.40.980.10 180 375 3.8E-61 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 Pfam PF03454 MoeA C-terminal region (domain IV) 376 448 1.1E-19 T 19-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 194 359 3.7E-29 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 PANTHER PTHR10192 32 312 4.3E-141 T 19-04-2016 ALIDE2_RS15630 1ad6c5afde68dc471c8e3d183f899f65 452 PANTHER PTHR10192 335 452 4.3E-141 T 19-04-2016 ALIDE2_RS09290 54f71ddc6534839e3bd73e3bb97d527c 431 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 268 418 1.9E-43 T 19-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain ALIDE2_RS09290 54f71ddc6534839e3bd73e3bb97d527c 431 Gene3D G3DSA:3.40.1080.10 18 176 9.3E-25 T 19-04-2016 ALIDE2_RS09290 54f71ddc6534839e3bd73e3bb97d527c 431 Gene3D G3DSA:3.40.810.20 188 419 7.9E-37 T 19-04-2016 ALIDE2_RS09290 54f71ddc6534839e3bd73e3bb97d527c 431 SUPERFAMILY SSF100950 183 422 1.12E-50 T 19-04-2016 ALIDE2_RS09290 54f71ddc6534839e3bd73e3bb97d527c 431 PANTHER PTHR21432 18 421 1.0E-103 T 19-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 ALIDE2_RS09290 54f71ddc6534839e3bd73e3bb97d527c 431 PANTHER PTHR21432:SF18 18 421 1.0E-103 T 19-04-2016 ALIDE2_RS09290 54f71ddc6534839e3bd73e3bb97d527c 431 SUPERFAMILY SSF100950 18 218 4.6E-14 T 19-04-2016 ALIDE2_RS06100 493993022cc1e5bc1e099d66fe2248ac 354 PANTHER PTHR34220 163 354 1.5E-58 T 19-04-2016 ALIDE2_RS06100 493993022cc1e5bc1e099d66fe2248ac 354 Gene3D G3DSA:3.30.565.10 250 337 1.9E-6 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS06100 493993022cc1e5bc1e099d66fe2248ac 354 Gene3D G3DSA:3.30.565.10 212 215 1.9E-6 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS06100 493993022cc1e5bc1e099d66fe2248ac 354 SUPERFAMILY SSF55874 220 330 6.02E-9 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS06100 493993022cc1e5bc1e099d66fe2248ac 354 Pfam PF06580 Histidine kinase 163 241 7.1E-24 T 19-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 ALIDE2_RS08595 5700799fcba37f7b1189c5c7fcb0a851 298 Gene3D G3DSA:3.40.190.10 90 174 6.3E-18 T 19-04-2016 ALIDE2_RS08595 5700799fcba37f7b1189c5c7fcb0a851 298 SUPERFAMILY SSF53850 87 291 3.53E-35 T 19-04-2016 ALIDE2_RS08595 5700799fcba37f7b1189c5c7fcb0a851 298 SUPERFAMILY SSF46785 3 85 2.18E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08595 5700799fcba37f7b1189c5c7fcb0a851 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.6E-21 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS08595 5700799fcba37f7b1189c5c7fcb0a851 298 PANTHER PTHR30346 1 289 4.9E-75 T 19-04-2016 ALIDE2_RS08595 5700799fcba37f7b1189c5c7fcb0a851 298 Pfam PF03466 LysR substrate binding domain 87 289 9.8E-36 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS08595 5700799fcba37f7b1189c5c7fcb0a851 298 Gene3D G3DSA:3.40.190.10 175 265 1.0E-19 T 19-04-2016 ALIDE2_RS08595 5700799fcba37f7b1189c5c7fcb0a851 298 Gene3D G3DSA:1.10.10.10 2 80 8.2E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08595 5700799fcba37f7b1189c5c7fcb0a851 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.6E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS08595 5700799fcba37f7b1189c5c7fcb0a851 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.6E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS08595 5700799fcba37f7b1189c5c7fcb0a851 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.6E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS09285 5ad45239e3e8b1471ce5efd7e7ef8ca7 390 PANTHER PTHR24023 81 375 1.1E-91 T 19-04-2016 ALIDE2_RS09285 5ad45239e3e8b1471ce5efd7e7ef8ca7 390 Gene3D G3DSA:3.30.1540.10 228 299 8.6E-8 T 19-04-2016 ALIDE2_RS09285 5ad45239e3e8b1471ce5efd7e7ef8ca7 390 Gene3D G3DSA:3.40.50.10540 6 212 8.1E-99 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS09285 5ad45239e3e8b1471ce5efd7e7ef8ca7 390 Gene3D G3DSA:3.40.50.10540 300 383 8.1E-99 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS09285 5ad45239e3e8b1471ce5efd7e7ef8ca7 390 Pfam PF02515 CoA-transferase family III 8 358 3.4E-83 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS09285 5ad45239e3e8b1471ce5efd7e7ef8ca7 390 PANTHER PTHR24023:SF591 81 375 1.1E-91 T 19-04-2016 ALIDE2_RS09285 5ad45239e3e8b1471ce5efd7e7ef8ca7 390 SUPERFAMILY SSF89796 5 383 1.83E-114 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS14645 6122160242e102d6020f68c738a48f14 218 Gene3D G3DSA:3.40.50.300 1 215 2.1E-80 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14645 6122160242e102d6020f68c738a48f14 218 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 ALIDE2_RS14645 6122160242e102d6020f68c738a48f14 218 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.3E-17 T 19-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 ALIDE2_RS14645 6122160242e102d6020f68c738a48f14 218 TIGRFAM TIGR01351 adk: adenylate kinase 2 216 3.3E-75 T 19-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 ALIDE2_RS14645 6122160242e102d6020f68c738a48f14 218 Pfam PF00406 Adenylate kinase 5 185 4.6E-58 T 19-04-2016 ALIDE2_RS14645 6122160242e102d6020f68c738a48f14 218 SUPERFAMILY SSF52540 1 215 2.24E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14645 6122160242e102d6020f68c738a48f14 218 PANTHER PTHR23359 1 218 3.9E-112 T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 ALIDE2_RS14645 6122160242e102d6020f68c738a48f14 218 PRINTS PR00094 Adenylate kinase signature 156 171 3.2E-36 T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 ALIDE2_RS14645 6122160242e102d6020f68c738a48f14 218 PRINTS PR00094 Adenylate kinase signature 81 97 3.2E-36 T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 ALIDE2_RS14645 6122160242e102d6020f68c738a48f14 218 PRINTS PR00094 Adenylate kinase signature 173 187 3.2E-36 T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 ALIDE2_RS14645 6122160242e102d6020f68c738a48f14 218 PRINTS PR00094 Adenylate kinase signature 4 17 3.2E-36 T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 ALIDE2_RS14645 6122160242e102d6020f68c738a48f14 218 PRINTS PR00094 Adenylate kinase signature 32 46 3.2E-36 T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 ALIDE2_RS14645 6122160242e102d6020f68c738a48f14 218 Hamap MF_00235 Adenylate kinase [adk]. 1 217 54.418 T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 ALIDE2_RS15670 47623322c57c719d0faf978165fb45d4 210 Pfam PF03737 Demethylmenaquinone methyltransferase 28 164 2.4E-34 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS15670 47623322c57c719d0faf978165fb45d4 210 SUPERFAMILY SSF89562 13 174 7.06E-39 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS15670 47623322c57c719d0faf978165fb45d4 210 PANTHER PTHR33254 34 201 2.3E-40 T 19-04-2016 ALIDE2_RS15670 47623322c57c719d0faf978165fb45d4 210 PANTHER PTHR33254:SF5 34 201 2.3E-40 T 19-04-2016 ALIDE2_RS15670 47623322c57c719d0faf978165fb45d4 210 Gene3D G3DSA:3.50.30.40 13 172 1.6E-40 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS01010 e9dfcb0dc0a8227a2630769e69576d2b 180 PANTHER PTHR21087 7 153 2.6E-50 T 19-04-2016 ALIDE2_RS01010 e9dfcb0dc0a8227a2630769e69576d2b 180 Pfam PF01202 Shikimate kinase 11 168 4.2E-47 T 19-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS01010 e9dfcb0dc0a8227a2630769e69576d2b 180 ProSitePatterns PS01128 Shikimate kinase signature. 58 84 - T 19-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS01010 e9dfcb0dc0a8227a2630769e69576d2b 180 PRINTS PR01100 Shikimate kinase family signature 76 85 6.2E-20 T 19-04-2016 ALIDE2_RS01010 e9dfcb0dc0a8227a2630769e69576d2b 180 PRINTS PR01100 Shikimate kinase family signature 98 115 6.2E-20 T 19-04-2016 ALIDE2_RS01010 e9dfcb0dc0a8227a2630769e69576d2b 180 PRINTS PR01100 Shikimate kinase family signature 57 65 6.2E-20 T 19-04-2016 ALIDE2_RS01010 e9dfcb0dc0a8227a2630769e69576d2b 180 PRINTS PR01100 Shikimate kinase family signature 5 20 6.2E-20 T 19-04-2016 ALIDE2_RS01010 e9dfcb0dc0a8227a2630769e69576d2b 180 PRINTS PR01100 Shikimate kinase family signature 29 42 6.2E-20 T 19-04-2016 ALIDE2_RS01010 e9dfcb0dc0a8227a2630769e69576d2b 180 Hamap MF_00109 Shikimate kinase [aroK]. 2 170 28.319 T 19-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS01010 e9dfcb0dc0a8227a2630769e69576d2b 180 SUPERFAMILY SSF52540 5 165 5.28E-31 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01010 e9dfcb0dc0a8227a2630769e69576d2b 180 Gene3D G3DSA:3.40.50.300 2 170 2.3E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08820 a4c7eabd6bfe51442b79c838042f1f09 107 Gene3D G3DSA:1.10.10.60 8 95 1.7E-19 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS08820 a4c7eabd6bfe51442b79c838042f1f09 107 PANTHER PTHR33215:SF3 1 106 3.4E-25 T 19-04-2016 ALIDE2_RS08820 a4c7eabd6bfe51442b79c838042f1f09 107 PANTHER PTHR33215 1 106 3.4E-25 T 19-04-2016 ALIDE2_RS08820 a4c7eabd6bfe51442b79c838042f1f09 107 SUPERFAMILY SSF46689 6 98 1.38E-17 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS08820 a4c7eabd6bfe51442b79c838042f1f09 107 Pfam PF01527 Transposase 1 86 1.8E-10 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS09785 57620cbabc41c355ed578b739873e980 123 Pfam PF12553 Protein of unknown function (DUF3742) 1 120 1.2E-44 T 19-04-2016 IPR022213 Protein of unknown function DUF3742 ALIDE2_RS17195 1ffa8861d78e4b33c5e3ccb1a3a1d4e0 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 12 185 8.5E-68 T 19-04-2016 IPR002661 Ribosome recycling factor GO:0006412 ALIDE2_RS17195 1ffa8861d78e4b33c5e3ccb1a3a1d4e0 186 Gene3D G3DSA:1.10.132.20 67 185 8.0E-42 T 19-04-2016 IPR023584 Ribosome recycling factor domain ALIDE2_RS17195 1ffa8861d78e4b33c5e3ccb1a3a1d4e0 186 PANTHER PTHR20982 3 186 1.6E-77 T 19-04-2016 IPR002661 Ribosome recycling factor GO:0006412 ALIDE2_RS17195 1ffa8861d78e4b33c5e3ccb1a3a1d4e0 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 26.606 T 19-04-2016 IPR002661 Ribosome recycling factor GO:0006412 ALIDE2_RS17195 1ffa8861d78e4b33c5e3ccb1a3a1d4e0 186 SUPERFAMILY SSF55194 5 184 2.35E-68 T 19-04-2016 IPR023584 Ribosome recycling factor domain ALIDE2_RS17195 1ffa8861d78e4b33c5e3ccb1a3a1d4e0 186 Pfam PF01765 Ribosome recycling factor 21 184 8.2E-62 T 19-04-2016 IPR023584 Ribosome recycling factor domain ALIDE2_RS01125 1151d65c250a04fded4dac5efc7c6c78 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 7.3E-22 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS01125 1151d65c250a04fded4dac5efc7c6c78 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 226 372 2.2E-34 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS01125 1151d65c250a04fded4dac5efc7c6c78 384 SUPERFAMILY SSF56645 1 225 7.2E-58 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS01125 1151d65c250a04fded4dac5efc7c6c78 384 PANTHER PTHR10909 1 375 4.5E-98 T 19-04-2016 ALIDE2_RS01125 1151d65c250a04fded4dac5efc7c6c78 384 SUPERFAMILY SSF47203 225 379 2.58E-40 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS01125 1151d65c250a04fded4dac5efc7c6c78 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 213 1.8E-18 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS01125 1151d65c250a04fded4dac5efc7c6c78 384 Gene3D G3DSA:1.10.540.10 1 119 5.0E-28 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS01125 1151d65c250a04fded4dac5efc7c6c78 384 PANTHER PTHR10909:SF305 1 375 4.5E-98 T 19-04-2016 ALIDE2_RS01125 1151d65c250a04fded4dac5efc7c6c78 384 Gene3D G3DSA:2.40.110.10 122 216 3.1E-28 T 19-04-2016 ALIDE2_RS01125 1151d65c250a04fded4dac5efc7c6c78 384 Gene3D G3DSA:1.20.140.10 217 375 1.6E-46 T 19-04-2016 ALIDE2_RS23315 791252c89b89dc14df2e4a6215c36479 488 Pfam PF07364 Metallopeptidase family M81 2 283 3.0E-93 T 19-04-2016 IPR015995 Microcystin LR degradation protein MlrC, N-terminal ALIDE2_RS23315 791252c89b89dc14df2e4a6215c36479 488 PIRSF PIRSF012702 1 488 1.8E-160 T 19-04-2016 IPR009197 Microcystin LR degradation protein MlrC ALIDE2_RS23315 791252c89b89dc14df2e4a6215c36479 488 Pfam PF07171 MlrC C-terminus 296 477 3.6E-57 T 19-04-2016 IPR010799 Microcystin LR degradation protein MlrC, C-terminal ALIDE2_RS21645 99c5145c90d010f6e0949afc6a6c6d2b 106 PANTHER PTHR12903 3 103 6.4E-40 T 19-04-2016 ALIDE2_RS21645 99c5145c90d010f6e0949afc6a6c6d2b 106 SUPERFAMILY SSF50104 3 100 1.1E-29 T 19-04-2016 IPR008991 Translation protein SH3-like domain ALIDE2_RS21645 99c5145c90d010f6e0949afc6a6c6d2b 106 Pfam PF00467 KOW motif 6 25 1.7E-5 T 19-04-2016 IPR005824 KOW ALIDE2_RS21645 99c5145c90d010f6e0949afc6a6c6d2b 106 Gene3D G3DSA:2.30.30.30 3 91 7.3E-20 T 19-04-2016 IPR014722 Ribosomal protein L2 domain 2 ALIDE2_RS21645 99c5145c90d010f6e0949afc6a6c6d2b 106 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 103 6.9E-24 T 19-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21645 99c5145c90d010f6e0949afc6a6c6d2b 106 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 103 2.4E-33 T 19-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21645 99c5145c90d010f6e0949afc6a6c6d2b 106 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 97 18.251 T 19-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21645 99c5145c90d010f6e0949afc6a6c6d2b 106 SMART SM00739 3 30 5.6E-4 T 19-04-2016 IPR005824 KOW ALIDE2_RS21645 99c5145c90d010f6e0949afc6a6c6d2b 106 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 19-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS22150 d6017050c3b63dcd118e082ab709b2a7 508 Pfam PF00171 Aldehyde dehydrogenase family 29 495 3.6E-163 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22150 d6017050c3b63dcd118e082ab709b2a7 508 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22150 d6017050c3b63dcd118e082ab709b2a7 508 Gene3D G3DSA:3.40.309.10 273 471 4.9E-60 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS22150 d6017050c3b63dcd118e082ab709b2a7 508 PANTHER PTHR11699 1 508 0.0 T 19-04-2016 ALIDE2_RS22150 d6017050c3b63dcd118e082ab709b2a7 508 Gene3D G3DSA:3.40.605.10 19 272 3.0E-93 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22150 d6017050c3b63dcd118e082ab709b2a7 508 SUPERFAMILY SSF53720 11 500 2.23E-161 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22150 d6017050c3b63dcd118e082ab709b2a7 508 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22150 d6017050c3b63dcd118e082ab709b2a7 508 PANTHER PTHR11699:SF97 1 508 0.0 T 19-04-2016 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 SMART SM00316 622 692 1.7E-23 T 19-04-2016 IPR022967 RNA-binding domain, S1 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 695 29.524 T 19-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 Gene3D G3DSA:3.30.230.70 317 545 4.1E-87 T 19-04-2016 IPR027408 PNPase/RNase PH domain ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 Gene3D G3DSA:3.30.230.70 3 226 1.2E-80 T 19-04-2016 IPR027408 PNPase/RNase PH domain ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 Gene3D G3DSA:1.10.10.400 228 316 2.4E-19 T 19-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 Gene3D G3DSA:2.40.50.140 620 696 4.6E-25 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 322 1.1E-14 T 19-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 SUPERFAMILY SSF54211 3 146 5.57E-50 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 SMART SM00322 554 619 3.3E-14 T 19-04-2016 IPR004087 K Homology domain GO:0003676 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 19-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 Pfam PF00013 KH domain 559 616 1.8E-11 T 19-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 Pfam PF01138 3' exoribonuclease family, domain 1 326 458 2.9E-20 T 19-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 Pfam PF01138 3' exoribonuclease family, domain 1 18 146 1.0E-18 T 19-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 SUPERFAMILY SSF54791 557 641 2.05E-22 T 19-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 PANTHER PTHR11252:SF0 3 731 0.0 T 19-04-2016 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 SUPERFAMILY SSF46915 241 323 1.15E-14 T 19-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 Pfam PF00575 S1 RNA binding domain 621 692 5.2E-16 T 19-04-2016 IPR003029 S1 domain GO:0003676 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 SUPERFAMILY SSF54211 296 490 2.99E-47 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 PIRSF PIRSF005499 3 725 4.8E-291 T 19-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 PANTHER PTHR11252 3 731 0.0 T 19-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 SUPERFAMILY SSF50249 622 699 2.65E-20 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 Pfam PF03725 3' exoribonuclease family, domain 2 149 211 5.7E-8 T 19-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 Gene3D G3DSA:3.30.1370.10 554 619 3.5E-26 T 19-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 SUPERFAMILY SSF55666 147 237 1.82E-27 T 19-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 ALIDE2_RS19855 164bdef7fbf6727cf23e70e62997ff74 731 SUPERFAMILY SSF55666 455 562 4.35E-28 T 19-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 ALIDE2_RS13120 f602c8ccc5d84bb79551ed5d982630d9 266 PANTHER PTHR30429 4 266 7.9E-133 T 19-04-2016 IPR004872 Lipoprotein NlpA family ALIDE2_RS13120 f602c8ccc5d84bb79551ed5d982630d9 266 Gene3D G3DSA:3.40.190.10 28 158 1.2E-55 T 19-04-2016 ALIDE2_RS13120 f602c8ccc5d84bb79551ed5d982630d9 266 PIRSF PIRSF002854 1 266 8.6E-102 T 19-04-2016 IPR004872 Lipoprotein NlpA family ALIDE2_RS13120 f602c8ccc5d84bb79551ed5d982630d9 266 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 26 266 1.7E-81 T 19-04-2016 IPR004872 Lipoprotein NlpA family ALIDE2_RS13120 f602c8ccc5d84bb79551ed5d982630d9 266 SUPERFAMILY SSF53850 31 266 1.31E-89 T 19-04-2016 ALIDE2_RS13120 f602c8ccc5d84bb79551ed5d982630d9 266 Pfam PF03180 NLPA lipoprotein 31 266 1.2E-93 T 19-04-2016 IPR004872 Lipoprotein NlpA family ALIDE2_RS02560 676323cf777fd79dcc31585f39cf3630 252 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 214 3.5E-22 T 19-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type ALIDE2_RS02560 676323cf777fd79dcc31585f39cf3630 252 Gene3D G3DSA:3.60.21.10 1 252 1.1E-64 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS02560 676323cf777fd79dcc31585f39cf3630 252 PANTHER PTHR11124 189 252 1.7E-42 T 19-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 ALIDE2_RS02560 676323cf777fd79dcc31585f39cf3630 252 PANTHER PTHR11124 99 168 1.7E-42 T 19-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 ALIDE2_RS02560 676323cf777fd79dcc31585f39cf3630 252 PANTHER PTHR11124 1 75 1.7E-42 T 19-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 ALIDE2_RS02560 676323cf777fd79dcc31585f39cf3630 252 PIRSF PIRSF000883 1 252 4.0E-53 T 19-04-2016 IPR011152 Phosphoesterase MJ0912 ALIDE2_RS02560 676323cf777fd79dcc31585f39cf3630 252 PANTHER PTHR11124:SF2 189 252 1.7E-42 T 19-04-2016 ALIDE2_RS02560 676323cf777fd79dcc31585f39cf3630 252 PANTHER PTHR11124:SF2 99 168 1.7E-42 T 19-04-2016 ALIDE2_RS02560 676323cf777fd79dcc31585f39cf3630 252 PANTHER PTHR11124:SF2 1 75 1.7E-42 T 19-04-2016 ALIDE2_RS02560 676323cf777fd79dcc31585f39cf3630 252 SUPERFAMILY SSF56300 1 251 1.22E-50 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 SMART SM00436 122 217 2.0E-34 T 19-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 SMART SM00437 271 556 3.8E-64 T 19-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 SMART SM00493 1 122 1.4E-21 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 Pfam PF01131 DNA topoisomerase 149 590 2.0E-113 T 19-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 655 3.6E-217 T 19-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 PANTHER PTHR11390 1 501 1.5E-166 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 PANTHER PTHR11390 519 653 1.5E-166 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 Pfam PF01751 Toprim domain 3 129 6.6E-15 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 618 652 1.3E-12 T 19-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 Gene3D G3DSA:2.70.20.10 361 479 1.1E-34 T 19-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 Gene3D G3DSA:2.70.20.10 214 245 1.1E-34 T 19-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 SUPERFAMILY SSF57783 614 652 7.99E-11 T 19-04-2016 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 Gene3D G3DSA:1.10.460.10 152 211 2.3E-52 T 19-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 Gene3D G3DSA:1.10.460.10 480 604 2.3E-52 T 19-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 SUPERFAMILY SSF56712 1 604 1.23E-178 T 19-04-2016 IPR023405 DNA topoisomerase, type IA, core domain ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 3.8E-25 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 3.8E-25 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 519 533 3.8E-25 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 3.8E-25 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 3.8E-25 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 Gene3D G3DSA:3.30.65.10 618 652 1.3E-11 T 19-04-2016 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 19-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 ALIDE2_RS09405 da2bb5b31a50593771f323e858edc494 676 Gene3D G3DSA:3.40.50.140 1 147 9.9E-45 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS10410 c742cb6b70d972c028561cbfff06a547 338 SUPERFAMILY SSF51735 125 303 2.12E-41 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS10410 c742cb6b70d972c028561cbfff06a547 338 Gene3D G3DSA:3.40.50.720 143 305 1.1E-56 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS10410 c742cb6b70d972c028561cbfff06a547 338 PANTHER PTHR11695 22 337 8.3E-105 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS10410 c742cb6b70d972c028561cbfff06a547 338 Pfam PF16884 N-terminal domain of oxidoreductase 6 108 6.5E-38 T 19-04-2016 ALIDE2_RS10410 c742cb6b70d972c028561cbfff06a547 338 SUPERFAMILY SSF50129 3 169 4.5E-38 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS10410 c742cb6b70d972c028561cbfff06a547 338 SMART SM00829 17 335 3.0E-6 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ALIDE2_RS10410 c742cb6b70d972c028561cbfff06a547 338 Gene3D G3DSA:3.90.180.10 2 142 1.2E-51 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS10410 c742cb6b70d972c028561cbfff06a547 338 PANTHER PTHR11695:SF557 22 337 8.3E-105 T 19-04-2016 ALIDE2_RS10410 c742cb6b70d972c028561cbfff06a547 338 Pfam PF00107 Zinc-binding dehydrogenase 160 295 7.5E-17 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ALIDE2_RS11300 084fd0a83be54b4ff213a7a8a4eb93d8 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 323 2.9E-78 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS11300 084fd0a83be54b4ff213a7a8a4eb93d8 327 SUPERFAMILY SSF53850 114 291 1.85E-10 T 19-04-2016 ALIDE2_RS11300 084fd0a83be54b4ff213a7a8a4eb93d8 327 PANTHER PTHR30349 5 324 3.0E-89 T 19-04-2016 ALIDE2_RS11300 084fd0a83be54b4ff213a7a8a4eb93d8 327 PANTHER PTHR30349:SF16 5 324 3.0E-89 T 19-04-2016 ALIDE2_RS11300 084fd0a83be54b4ff213a7a8a4eb93d8 327 PIRSF PIRSF017082 1 327 2.0E-76 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 330 453 4.5E-26 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 Gene3D G3DSA:1.10.287.130 601 662 3.8E-5 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 PANTHER PTHR24423 53 80 6.1E-70 T 19-04-2016 ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 PANTHER PTHR24423 577 846 6.1E-70 T 19-04-2016 ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 PANTHER PTHR24423 328 444 6.1E-70 T 19-04-2016 ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 PRINTS PR00344 Bacterial sensor protein C-terminal signature 788 806 5.3E-13 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 PRINTS PR00344 Bacterial sensor protein C-terminal signature 816 829 5.3E-13 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 PRINTS PR00344 Bacterial sensor protein C-terminal signature 777 787 5.3E-13 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 PRINTS PR00344 Bacterial sensor protein C-terminal signature 759 773 5.3E-13 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 SUPERFAMILY SSF55785 317 444 4.99E-26 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 Gene3D G3DSA:3.30.450.20 317 443 3.0E-24 T 19-04-2016 ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 Gene3D G3DSA:3.30.450.20 444 576 1.1E-4 T 19-04-2016 ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 713 831 1.8E-15 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 SMART SM00388 600 670 2.3E-8 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 Pfam PF00989 PAS fold 331 443 1.7E-18 T 19-04-2016 IPR013767 PAS fold GO:0006355 ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 SMART SM00091 330 397 2.0E-11 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 Pfam PF00512 His Kinase A (phospho-acceptor) domain 601 667 1.8E-9 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 SMART SM00387 712 832 8.2E-27 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 SUPERFAMILY SSF55874 656 831 4.32E-31 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 SUPERFAMILY SSF47384 593 667 1.37E-9 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 SMART SM00086 404 446 1.2E-4 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS12040 4e4868f6199e98e3dcd525041fa7eb41 850 Gene3D G3DSA:3.30.565.10 672 831 1.7E-32 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS07375 47d0801bf8689a14853b43d30d9def94 140 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 9 132 3.5E-14 T 19-04-2016 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 ALIDE2_RS07375 47d0801bf8689a14853b43d30d9def94 140 Gene3D G3DSA:3.10.450.50 1 131 4.6E-16 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS07375 47d0801bf8689a14853b43d30d9def94 140 Pfam PF13474 SnoaL-like domain 13 132 4.1E-13 T 19-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain ALIDE2_RS07375 47d0801bf8689a14853b43d30d9def94 140 SUPERFAMILY SSF54427 3 132 2.15E-24 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS18350 6a6cdeb3c3f39664cc77fb37970e3ef7 88 SUPERFAMILY SSF46689 1 69 1.16E-11 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS18350 6a6cdeb3c3f39664cc77fb37970e3ef7 88 Gene3D G3DSA:1.10.10.60 15 83 6.6E-10 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS18350 6a6cdeb3c3f39664cc77fb37970e3ef7 88 Pfam PF01527 Transposase 2 71 6.2E-17 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS18350 6a6cdeb3c3f39664cc77fb37970e3ef7 88 PANTHER PTHR33609 2 87 3.0E-37 T 19-04-2016 ALIDE2_RS21935 7e1e75f287a0ac57a1f8f4d11e90aebe 201 SMART SM01012 138 193 4.6E-9 T 19-04-2016 IPR005561 ANTAR domain GO:0003723 ALIDE2_RS21935 7e1e75f287a0ac57a1f8f4d11e90aebe 201 Gene3D G3DSA:1.10.10.10 143 197 3.9E-10 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS21935 7e1e75f287a0ac57a1f8f4d11e90aebe 201 Pfam PF03861 ANTAR domain 140 193 1.8E-10 T 19-04-2016 IPR005561 ANTAR domain GO:0003723 ALIDE2_RS21935 7e1e75f287a0ac57a1f8f4d11e90aebe 201 PANTHER PTHR26402 11 187 1.2E-29 T 19-04-2016 ALIDE2_RS21935 7e1e75f287a0ac57a1f8f4d11e90aebe 201 Pfam PF00072 Response regulator receiver domain 14 122 9.6E-21 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS21935 7e1e75f287a0ac57a1f8f4d11e90aebe 201 Gene3D G3DSA:3.40.50.2300 12 142 4.2E-29 T 19-04-2016 ALIDE2_RS21935 7e1e75f287a0ac57a1f8f4d11e90aebe 201 SUPERFAMILY SSF52172 10 193 9.25E-40 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS21935 7e1e75f287a0ac57a1f8f4d11e90aebe 201 SMART SM00448 11 122 2.9E-28 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS21935 7e1e75f287a0ac57a1f8f4d11e90aebe 201 PIRSF PIRSF036382 4 200 1.8E-35 T 19-04-2016 IPR008327 Signal transduction response regulator, antiterminator ALIDE2_RS01490 6c91ebaa518cc32763fe1cb8bb7b6cff 483 SUPERFAMILY SSF53720 3 481 1.44E-152 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS01490 6c91ebaa518cc32763fe1cb8bb7b6cff 483 Pfam PF00171 Aldehyde dehydrogenase family 24 476 3.8E-164 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS01490 6c91ebaa518cc32763fe1cb8bb7b6cff 483 PANTHER PTHR11699 25 482 7.1E-193 T 19-04-2016 ALIDE2_RS01490 6c91ebaa518cc32763fe1cb8bb7b6cff 483 Gene3D G3DSA:3.40.605.10 6 264 6.9E-85 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS01490 6c91ebaa518cc32763fe1cb8bb7b6cff 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS01490 6c91ebaa518cc32763fe1cb8bb7b6cff 483 Gene3D G3DSA:3.40.309.10 265 443 1.6E-66 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 SMART SM00448 2 121 6.4E-26 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 471 6.4E-209 T 19-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 Gene3D G3DSA:1.10.10.60 404 474 8.8E-17 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 SUPERFAMILY SSF46689 384 474 2.08E-19 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 454 1.1E-9 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 454 474 1.1E-9 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 19-04-2016 IPR025944 Sigma-54 interaction domain, conserved site ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 Gene3D G3DSA:1.10.8.60 317 391 5.9E-25 T 19-04-2016 ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 SUPERFAMILY SSF52540 144 387 6.48E-73 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 SUPERFAMILY SSF52172 2 189 1.05E-37 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 19-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 SMART SM00382 164 311 5.1E-13 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 PANTHER PTHR32071 1 474 2.4E-213 T 19-04-2016 ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 Gene3D G3DSA:3.40.50.2300 3 139 1.3E-31 T 19-04-2016 ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 Gene3D G3DSA:3.40.50.300 142 316 1.7E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 19-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 PANTHER PTHR32071:SF15 1 474 2.4E-213 T 19-04-2016 ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 Pfam PF00072 Response regulator receiver domain 4 121 2.4E-22 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 Pfam PF02954 Bacterial regulatory protein, Fis family 432 471 7.4E-11 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS07170 3c38a8a8dc9cd872b3de201a1e92af4d 479 Pfam PF00158 Sigma-54 interaction domain 145 310 1.7E-67 T 19-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ALIDE2_RS11270 6d88497b6add12adea8f9d851f4b9320 727 Pfam PF12805 FUSC-like inner membrane protein yccS 84 321 5.7E-29 T 19-04-2016 IPR032692 Integral membrane protein YccS, N-terminal ALIDE2_RS11270 6d88497b6add12adea8f9d851f4b9320 727 PANTHER PTHR30509 395 664 9.2E-18 T 19-04-2016 ALIDE2_RS11270 6d88497b6add12adea8f9d851f4b9320 727 PANTHER PTHR30509:SF8 395 664 9.2E-18 T 19-04-2016 ALIDE2_RS11270 6d88497b6add12adea8f9d851f4b9320 727 Pfam PF13515 Fusaric acid resistance protein-like 410 533 1.2E-17 T 19-04-2016 ALIDE2_RS09145 02dd4d953c0b2e139a27b743226eb424 196 Gene3D G3DSA:3.30.420.10 117 196 5.1E-20 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS09145 02dd4d953c0b2e139a27b743226eb424 196 Pfam PF13276 HTH-like domain 46 99 3.5E-13 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS09145 02dd4d953c0b2e139a27b743226eb424 196 Pfam PF00665 Integrase core domain 124 196 3.1E-17 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS09145 02dd4d953c0b2e139a27b743226eb424 196 PANTHER PTHR32552 8 196 1.1E-42 T 19-04-2016 ALIDE2_RS09145 02dd4d953c0b2e139a27b743226eb424 196 SUPERFAMILY SSF53098 116 196 6.83E-23 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS22780 474730163cfd43ac7c804ef8e57e21a0 156 SUPERFAMILY SSF52402 1 110 1.0E-5 T 19-04-2016 ALIDE2_RS22780 474730163cfd43ac7c804ef8e57e21a0 156 Gene3D G3DSA:3.40.50.620 2 107 2.2E-4 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS20385 4fc51f4e3dc7bca20db310ce2af0ff6a 270 PANTHER PTHR11941 8 261 1.2E-72 T 19-04-2016 ALIDE2_RS20385 4fc51f4e3dc7bca20db310ce2af0ff6a 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 262 1.4E-52 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS20385 4fc51f4e3dc7bca20db310ce2af0ff6a 270 Gene3D G3DSA:3.90.226.10 2 258 1.5E-71 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS20385 4fc51f4e3dc7bca20db310ce2af0ff6a 270 SUPERFAMILY SSF52096 3 262 2.34E-74 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS15990 202f7368105339c1b2ef63db2cc1b666 197 SUPERFAMILY SSF110857 28 151 3.34E-11 T 19-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like ALIDE2_RS15990 202f7368105339c1b2ef63db2cc1b666 197 Pfam PF04752 ChaC-like protein 28 191 1.7E-36 T 19-04-2016 IPR006840 ChaC-like protein ALIDE2_RS15990 202f7368105339c1b2ef63db2cc1b666 197 Gene3D G3DSA:3.10.490.10 26 188 9.7E-23 T 19-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like ALIDE2_RS15990 202f7368105339c1b2ef63db2cc1b666 197 PANTHER PTHR12192 27 190 2.6E-39 T 19-04-2016 IPR006840 ChaC-like protein ALIDE2_RS15990 202f7368105339c1b2ef63db2cc1b666 197 PANTHER PTHR12192:SF9 27 190 2.6E-39 T 19-04-2016 ALIDE2_RS00475 a9beafc062b3005c4f1fc71151cb68a0 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 5.9E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00475 a9beafc062b3005c4f1fc71151cb68a0 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.3E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00475 a9beafc062b3005c4f1fc71151cb68a0 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.3E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00475 a9beafc062b3005c4f1fc71151cb68a0 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.3E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00475 a9beafc062b3005c4f1fc71151cb68a0 312 Gene3D G3DSA:1.10.10.10 11 89 1.2E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00475 a9beafc062b3005c4f1fc71151cb68a0 312 PANTHER PTHR30537:SF5 1 306 2.9E-106 T 19-04-2016 ALIDE2_RS00475 a9beafc062b3005c4f1fc71151cb68a0 312 Pfam PF03466 LysR substrate binding domain 93 295 2.6E-38 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS00475 a9beafc062b3005c4f1fc71151cb68a0 312 PANTHER PTHR30537 1 306 2.9E-106 T 19-04-2016 ALIDE2_RS00475 a9beafc062b3005c4f1fc71151cb68a0 312 Gene3D G3DSA:3.40.190.10 96 180 7.5E-23 T 19-04-2016 ALIDE2_RS00475 a9beafc062b3005c4f1fc71151cb68a0 312 SUPERFAMILY SSF53850 96 301 1.99E-42 T 19-04-2016 ALIDE2_RS00475 a9beafc062b3005c4f1fc71151cb68a0 312 SUPERFAMILY SSF46785 11 116 3.79E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00475 a9beafc062b3005c4f1fc71151cb68a0 312 Gene3D G3DSA:3.40.190.10 181 265 8.2E-22 T 19-04-2016 ALIDE2_RS05110 c7bc744e72f7382c52f84daeb52d1560 536 PANTHER PTHR11632:SF38 6 380 1.1E-86 T 19-04-2016 ALIDE2_RS05110 c7bc744e72f7382c52f84daeb52d1560 536 PANTHER PTHR11632:SF38 454 531 1.1E-86 T 19-04-2016 ALIDE2_RS05110 c7bc744e72f7382c52f84daeb52d1560 536 Pfam PF00890 FAD binding domain 7 517 7.4E-65 T 19-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain ALIDE2_RS05110 c7bc744e72f7382c52f84daeb52d1560 536 SUPERFAMILY SSF51905 472 534 4.99E-37 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS05110 c7bc744e72f7382c52f84daeb52d1560 536 SUPERFAMILY SSF51905 2 262 4.99E-37 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS05110 c7bc744e72f7382c52f84daeb52d1560 536 Gene3D G3DSA:3.50.50.60 4 257 5.1E-58 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS05110 c7bc744e72f7382c52f84daeb52d1560 536 Gene3D G3DSA:3.50.50.60 469 533 5.1E-58 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS05110 c7bc744e72f7382c52f84daeb52d1560 536 PIRSF PIRSF036654 1 535 2.0E-122 T 19-04-2016 IPR014614 Uncharacterised conserved protein UCP036654 GO:0016627|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00062 ALIDE2_RS05110 c7bc744e72f7382c52f84daeb52d1560 536 PANTHER PTHR11632 6 380 1.1E-86 T 19-04-2016 ALIDE2_RS05110 c7bc744e72f7382c52f84daeb52d1560 536 PANTHER PTHR11632 454 531 1.1E-86 T 19-04-2016 ALIDE2_RS01645 e1bafbe5efb97bddb2f71faf20cafdda 309 SUPERFAMILY SSF53850 105 308 1.69E-44 T 19-04-2016 ALIDE2_RS01645 e1bafbe5efb97bddb2f71faf20cafdda 309 PANTHER PTHR30419 14 308 3.8E-61 T 19-04-2016 ALIDE2_RS01645 e1bafbe5efb97bddb2f71faf20cafdda 309 Gene3D G3DSA:1.10.10.10 21 102 2.4E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01645 e1bafbe5efb97bddb2f71faf20cafdda 309 PANTHER PTHR30419:SF2 14 308 3.8E-61 T 19-04-2016 ALIDE2_RS01645 e1bafbe5efb97bddb2f71faf20cafdda 309 Pfam PF03466 LysR substrate binding domain 105 308 5.0E-44 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS01645 e1bafbe5efb97bddb2f71faf20cafdda 309 Gene3D G3DSA:3.40.190.10 108 191 2.3E-21 T 19-04-2016 ALIDE2_RS01645 e1bafbe5efb97bddb2f71faf20cafdda 309 SUPERFAMILY SSF46785 18 129 2.04E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01645 e1bafbe5efb97bddb2f71faf20cafdda 309 Gene3D G3DSA:3.40.190.10 192 281 1.6E-19 T 19-04-2016 ALIDE2_RS01645 e1bafbe5efb97bddb2f71faf20cafdda 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 80 5.1E-17 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS18605 78788934c816b558dcff4e519d2d2d4a 260 SUPERFAMILY SSF46785 167 247 5.73E-13 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18605 78788934c816b558dcff4e519d2d2d4a 260 PANTHER PTHR24567 7 249 2.3E-34 T 19-04-2016 ALIDE2_RS18605 78788934c816b558dcff4e519d2d2d4a 260 Gene3D G3DSA:1.10.10.10 167 248 8.9E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18605 78788934c816b558dcff4e519d2d2d4a 260 SUPERFAMILY SSF51206 25 164 9.03E-29 T 19-04-2016 IPR018490 Cyclic nucleotide-binding-like ALIDE2_RS18605 78788934c816b558dcff4e519d2d2d4a 260 PANTHER PTHR24567:SF30 7 249 2.3E-34 T 19-04-2016 ALIDE2_RS18605 78788934c816b558dcff4e519d2d2d4a 260 SMART SM00100 31 152 1.2E-8 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS18605 78788934c816b558dcff4e519d2d2d4a 260 Pfam PF13545 Crp-like helix-turn-helix domain 169 246 1.6E-13 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS18605 78788934c816b558dcff4e519d2d2d4a 260 Gene3D G3DSA:2.60.120.10 28 163 1.3E-25 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS18605 78788934c816b558dcff4e519d2d2d4a 260 SMART SM00419 191 239 1.8E-4 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS18605 78788934c816b558dcff4e519d2d2d4a 260 Pfam PF00027 Cyclic nucleotide-binding domain 51 137 1.7E-15 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS08360 61941a785b933246f1d6d5cec17f08f2 557 Gene3D G3DSA:2.30.38.10 377 451 8.9E-17 T 19-04-2016 ALIDE2_RS08360 61941a785b933246f1d6d5cec17f08f2 557 PANTHER PTHR24096:SF53 11 550 9.3E-207 T 19-04-2016 ALIDE2_RS08360 61941a785b933246f1d6d5cec17f08f2 557 Gene3D G3DSA:3.40.50.980 205 357 3.6E-26 T 19-04-2016 ALIDE2_RS08360 61941a785b933246f1d6d5cec17f08f2 557 PANTHER PTHR24096 11 550 9.3E-207 T 19-04-2016 ALIDE2_RS08360 61941a785b933246f1d6d5cec17f08f2 557 SUPERFAMILY SSF56801 23 552 7.59E-129 T 19-04-2016 ALIDE2_RS08360 61941a785b933246f1d6d5cec17f08f2 557 Gene3D G3DSA:3.30.300.30 454 554 8.0E-28 T 19-04-2016 ALIDE2_RS08360 61941a785b933246f1d6d5cec17f08f2 557 Gene3D G3DSA:3.40.50.980 28 204 1.9E-28 T 19-04-2016 ALIDE2_RS08360 61941a785b933246f1d6d5cec17f08f2 557 Pfam PF13193 AMP-binding enzyme C-terminal domain 467 541 2.5E-19 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS08360 61941a785b933246f1d6d5cec17f08f2 557 Pfam PF00501 AMP-binding enzyme 31 457 3.5E-79 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS00855 43271d1ec3c56550514cba228a0766ea 402 SUPERFAMILY SSF53901 20 243 1.66E-24 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00855 43271d1ec3c56550514cba228a0766ea 402 Gene3D G3DSA:3.40.47.10 162 198 2.5E-15 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00855 43271d1ec3c56550514cba228a0766ea 402 Gene3D G3DSA:3.40.47.10 258 385 2.5E-15 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00855 43271d1ec3c56550514cba228a0766ea 402 Gene3D G3DSA:3.40.47.10 41 125 2.8E-15 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00855 43271d1ec3c56550514cba228a0766ea 402 Gene3D G3DSA:3.40.47.10 210 241 2.8E-15 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00855 43271d1ec3c56550514cba228a0766ea 402 PANTHER PTHR18919 19 400 2.3E-138 T 19-04-2016 ALIDE2_RS00855 43271d1ec3c56550514cba228a0766ea 402 Pfam PF02803 Thiolase, C-terminal domain 265 372 9.0E-5 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS00855 43271d1ec3c56550514cba228a0766ea 402 PANTHER PTHR18919:SF108 19 400 2.3E-138 T 19-04-2016 ALIDE2_RS00855 43271d1ec3c56550514cba228a0766ea 402 SUPERFAMILY SSF53901 247 388 6.81E-24 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00855 43271d1ec3c56550514cba228a0766ea 402 PIRSF PIRSF000429 18 396 3.8E-24 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS13500 fc9dba6145c49a6bbc195d392500ef72 451 SUPERFAMILY SSF53335 157 421 3.94E-76 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS13500 fc9dba6145c49a6bbc195d392500ef72 451 PANTHER PTHR10108:SF743 78 337 3.5E-113 T 19-04-2016 ALIDE2_RS13500 fc9dba6145c49a6bbc195d392500ef72 451 PANTHER PTHR10108:SF743 354 438 3.5E-113 T 19-04-2016 ALIDE2_RS13500 fc9dba6145c49a6bbc195d392500ef72 451 Gene3D G3DSA:3.40.50.150 144 420 1.3E-92 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS13500 fc9dba6145c49a6bbc195d392500ef72 451 PANTHER PTHR10108 78 337 3.5E-113 T 19-04-2016 ALIDE2_RS13500 fc9dba6145c49a6bbc195d392500ef72 451 PANTHER PTHR10108 354 438 3.5E-113 T 19-04-2016 ALIDE2_RS13500 fc9dba6145c49a6bbc195d392500ef72 451 PIRSF PIRSF003085 28 438 1.1E-126 T 19-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 ALIDE2_RS13500 fc9dba6145c49a6bbc195d392500ef72 451 Pfam PF02353 Mycolic acid cyclopropane synthetase 145 417 2.7E-95 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS18215 78ecfcd495293ab8cee74e987fa3573c 590 PANTHER PTHR24031 145 536 3.0E-147 T 19-04-2016 ALIDE2_RS18215 78ecfcd495293ab8cee74e987fa3573c 590 PANTHER PTHR24031 33 105 3.0E-147 T 19-04-2016 ALIDE2_RS18215 78ecfcd495293ab8cee74e987fa3573c 590 Gene3D G3DSA:3.40.50.300 283 447 1.2E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18215 78ecfcd495293ab8cee74e987fa3573c 590 Pfam PF00270 DEAD/DEAH box helicase 55 268 2.9E-42 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ALIDE2_RS18215 78ecfcd495293ab8cee74e987fa3573c 590 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 227 235 - T 19-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ALIDE2_RS18215 78ecfcd495293ab8cee74e987fa3573c 590 Gene3D G3DSA:3.40.50.300 146 277 1.1E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18215 78ecfcd495293ab8cee74e987fa3573c 590 Gene3D G3DSA:3.40.50.300 31 103 1.1E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18215 78ecfcd495293ab8cee74e987fa3573c 590 SMART SM00487 50 288 9.6E-45 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS18215 78ecfcd495293ab8cee74e987fa3573c 590 Pfam PF00271 Helicase conserved C-terminal domain 318 418 4.3E-24 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS18215 78ecfcd495293ab8cee74e987fa3573c 590 SUPERFAMILY SSF52540 151 437 7.09E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18215 78ecfcd495293ab8cee74e987fa3573c 590 SMART SM00490 337 418 2.0E-29 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS02320 c95fce73d983006ce95c48afcf201b8c 481 Pfam PF07690 Major Facilitator Superfamily 47 387 2.0E-10 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS02320 c95fce73d983006ce95c48afcf201b8c 481 TIGRFAM TIGR00886 2A0108: nitrite transporter 39 433 1.3E-93 T 19-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 ALIDE2_RS02320 c95fce73d983006ce95c48afcf201b8c 481 Gene3D G3DSA:1.20.1250.20 259 475 3.1E-10 T 19-04-2016 ALIDE2_RS02320 c95fce73d983006ce95c48afcf201b8c 481 SUPERFAMILY SSF103473 22 474 2.88E-35 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS02320 c95fce73d983006ce95c48afcf201b8c 481 Gene3D G3DSA:1.20.1250.20 38 238 6.3E-11 T 19-04-2016 ALIDE2_RS02320 c95fce73d983006ce95c48afcf201b8c 481 PANTHER PTHR23515 415 479 1.3E-191 T 19-04-2016 ALIDE2_RS02320 c95fce73d983006ce95c48afcf201b8c 481 PANTHER PTHR23515 1 391 1.3E-191 T 19-04-2016 ALIDE2_RS02320 c95fce73d983006ce95c48afcf201b8c 481 PANTHER PTHR23515:SF6 415 479 1.3E-191 T 19-04-2016 ALIDE2_RS02320 c95fce73d983006ce95c48afcf201b8c 481 PANTHER PTHR23515:SF6 1 391 1.3E-191 T 19-04-2016 ALIDE2_RS20075 0d1e6ec587b72393477dbc6925e0b556 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 241 1.6E-53 T 19-04-2016 ALIDE2_RS20075 0d1e6ec587b72393477dbc6925e0b556 247 SUPERFAMILY SSF51735 10 242 8.21E-71 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS20075 0d1e6ec587b72393477dbc6925e0b556 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 178 0.0026 T 19-04-2016 ALIDE2_RS20075 0d1e6ec587b72393477dbc6925e0b556 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS20075 0d1e6ec587b72393477dbc6925e0b556 247 Gene3D G3DSA:3.40.50.720 10 242 1.2E-72 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS20075 0d1e6ec587b72393477dbc6925e0b556 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 5.8E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20075 0d1e6ec587b72393477dbc6925e0b556 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 5.8E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20075 0d1e6ec587b72393477dbc6925e0b556 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 5.8E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20075 0d1e6ec587b72393477dbc6925e0b556 247 PANTHER PTHR24322 14 179 3.9E-45 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20075 0d1e6ec587b72393477dbc6925e0b556 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.1E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20075 0d1e6ec587b72393477dbc6925e0b556 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.1E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20075 0d1e6ec587b72393477dbc6925e0b556 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.1E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20075 0d1e6ec587b72393477dbc6925e0b556 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.1E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20075 0d1e6ec587b72393477dbc6925e0b556 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.1E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20075 0d1e6ec587b72393477dbc6925e0b556 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.1E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS14940 c458953170e8f9c7dd391bd4e7054f67 271 Gene3D G3DSA:3.40.50.300 66 229 2.3E-26 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14940 c458953170e8f9c7dd391bd4e7054f67 271 PANTHER PTHR30050:SF6 4 254 2.9E-73 T 19-04-2016 ALIDE2_RS14940 c458953170e8f9c7dd391bd4e7054f67 271 SMART SM00382 95 232 4.3E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS14940 c458953170e8f9c7dd391bd4e7054f67 271 PANTHER PTHR30050 4 254 2.9E-73 T 19-04-2016 ALIDE2_RS14940 c458953170e8f9c7dd391bd4e7054f67 271 SUPERFAMILY SSF52540 81 228 2.86E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14940 c458953170e8f9c7dd391bd4e7054f67 271 PIRSF PIRSF003073 1 250 4.7E-76 T 19-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ALIDE2_RS14940 c458953170e8f9c7dd391bd4e7054f67 271 Pfam PF01695 IstB-like ATP binding protein 52 228 5.1E-65 T 19-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 ALIDE2_RS01005 c458953170e8f9c7dd391bd4e7054f67 271 Gene3D G3DSA:3.40.50.300 66 229 2.3E-26 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01005 c458953170e8f9c7dd391bd4e7054f67 271 PANTHER PTHR30050:SF6 4 254 2.9E-73 T 19-04-2016 ALIDE2_RS01005 c458953170e8f9c7dd391bd4e7054f67 271 SMART SM00382 95 232 4.3E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS01005 c458953170e8f9c7dd391bd4e7054f67 271 PANTHER PTHR30050 4 254 2.9E-73 T 19-04-2016 ALIDE2_RS01005 c458953170e8f9c7dd391bd4e7054f67 271 SUPERFAMILY SSF52540 81 228 2.86E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01005 c458953170e8f9c7dd391bd4e7054f67 271 PIRSF PIRSF003073 1 250 4.7E-76 T 19-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ALIDE2_RS01005 c458953170e8f9c7dd391bd4e7054f67 271 Pfam PF01695 IstB-like ATP binding protein 52 228 5.1E-65 T 19-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 ALIDE2_RS00935 9cec52e2f4aa8c5f85ce4f3016622258 299 PANTHER PTHR30419:SF2 1 293 1.0E-101 T 19-04-2016 ALIDE2_RS00935 9cec52e2f4aa8c5f85ce4f3016622258 299 SUPERFAMILY SSF46785 2 113 4.35E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00935 9cec52e2f4aa8c5f85ce4f3016622258 299 SUPERFAMILY SSF53850 90 296 3.59E-39 T 19-04-2016 ALIDE2_RS00935 9cec52e2f4aa8c5f85ce4f3016622258 299 Gene3D G3DSA:3.40.190.10 177 268 1.8E-14 T 19-04-2016 ALIDE2_RS00935 9cec52e2f4aa8c5f85ce4f3016622258 299 Pfam PF03466 LysR substrate binding domain 89 294 4.8E-38 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS00935 9cec52e2f4aa8c5f85ce4f3016622258 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.2E-17 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00935 9cec52e2f4aa8c5f85ce4f3016622258 299 Gene3D G3DSA:1.10.10.10 3 87 2.8E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00935 9cec52e2f4aa8c5f85ce4f3016622258 299 PANTHER PTHR30419 1 293 1.0E-101 T 19-04-2016 ALIDE2_RS00935 9cec52e2f4aa8c5f85ce4f3016622258 299 Gene3D G3DSA:3.40.190.10 91 176 6.7E-19 T 19-04-2016 ALIDE2_RS01240 189e11e8b4434394c6b5eed814cee9c4 288 SUPERFAMILY SSF53850 87 281 3.34E-29 T 19-04-2016 ALIDE2_RS01240 189e11e8b4434394c6b5eed814cee9c4 288 PANTHER PTHR30126 1 273 8.4E-74 T 19-04-2016 ALIDE2_RS01240 189e11e8b4434394c6b5eed814cee9c4 288 Gene3D G3DSA:3.40.190.10 182 257 2.4E-10 T 19-04-2016 ALIDE2_RS01240 189e11e8b4434394c6b5eed814cee9c4 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.6E-20 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS01240 189e11e8b4434394c6b5eed814cee9c4 288 PANTHER PTHR30126:SF30 1 273 8.4E-74 T 19-04-2016 ALIDE2_RS01240 189e11e8b4434394c6b5eed814cee9c4 288 Gene3D G3DSA:1.10.10.10 1 83 6.3E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01240 189e11e8b4434394c6b5eed814cee9c4 288 SUPERFAMILY SSF46785 1 109 2.72E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01240 189e11e8b4434394c6b5eed814cee9c4 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS01240 189e11e8b4434394c6b5eed814cee9c4 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS01240 189e11e8b4434394c6b5eed814cee9c4 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS01240 189e11e8b4434394c6b5eed814cee9c4 288 Pfam PF03466 LysR substrate binding domain 85 283 6.8E-32 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS01240 189e11e8b4434394c6b5eed814cee9c4 288 Gene3D G3DSA:3.40.190.10 87 181 8.3E-22 T 19-04-2016 ALIDE2_RS09800 08cd8f9656e0a17234a0b1eee80e690a 621 Gene3D G3DSA:2.40.10.200 495 516 1.7E-9 T 19-04-2016 ALIDE2_RS09800 08cd8f9656e0a17234a0b1eee80e690a 621 Gene3D G3DSA:2.40.10.200 551 601 1.7E-9 T 19-04-2016 ALIDE2_RS09800 08cd8f9656e0a17234a0b1eee80e690a 621 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 28 245 6.1E-89 T 19-04-2016 IPR022391 Integrating conjugative element relaxase, PFGI-1 class ALIDE2_RS09800 08cd8f9656e0a17234a0b1eee80e690a 621 SUPERFAMILY SSF46785 475 601 2.12E-42 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS09800 08cd8f9656e0a17234a0b1eee80e690a 621 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 478 600 3.6E-48 T 19-04-2016 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal ALIDE2_RS09800 08cd8f9656e0a17234a0b1eee80e690a 621 Pfam PF07514 Putative helicase 29 342 3.2E-125 T 19-04-2016 IPR011119 Uncharacterised domain, helicase/relaxase, putative ALIDE2_RS00310 36bd979c0dfcda32409d32f8d31f3170 305 Pfam PF02195 ParB-like nuclease domain 40 131 3.6E-23 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS00310 36bd979c0dfcda32409d32f8d31f3170 305 SMART SM00470 37 131 1.9E-32 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS00310 36bd979c0dfcda32409d32f8d31f3170 305 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 38 207 5.5E-55 T 19-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 ALIDE2_RS00310 36bd979c0dfcda32409d32f8d31f3170 305 Gene3D G3DSA:3.90.1530.10 37 137 1.8E-36 T 19-04-2016 ALIDE2_RS00310 36bd979c0dfcda32409d32f8d31f3170 305 SUPERFAMILY SSF109709 124 231 3.14E-33 T 19-04-2016 ALIDE2_RS00310 36bd979c0dfcda32409d32f8d31f3170 305 PANTHER PTHR33375:SF1 1 304 2.4E-88 T 19-04-2016 ALIDE2_RS00310 36bd979c0dfcda32409d32f8d31f3170 305 PANTHER PTHR33375 1 304 2.4E-88 T 19-04-2016 ALIDE2_RS00310 36bd979c0dfcda32409d32f8d31f3170 305 SUPERFAMILY SSF110849 39 133 1.18E-27 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS03015 ba004084340716bc738a76ca2742f100 147 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 15 135 1.0E-45 T 19-04-2016 IPR008769 Poly granule associated ALIDE2_RS03015 ba004084340716bc738a76ca2742f100 147 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 22 135 1.9E-30 T 19-04-2016 IPR008769 Poly granule associated ALIDE2_RS03015 ba004084340716bc738a76ca2742f100 147 PANTHER PTHR38664 6 147 1.0E-17 T 19-04-2016 ALIDE2_RS03015 ba004084340716bc738a76ca2742f100 147 PANTHER PTHR38664:SF1 6 147 1.0E-17 T 19-04-2016 ALIDE2_RS21805 edb79f7a6af28fe33acd5262487a976f 226 SUPERFAMILY SSF51366 4 223 7.33E-72 T 19-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 ALIDE2_RS21805 edb79f7a6af28fe33acd5262487a976f 226 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 7 222 5.9E-92 T 19-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ALIDE2_RS21805 edb79f7a6af28fe33acd5262487a976f 226 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 19-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ALIDE2_RS21805 edb79f7a6af28fe33acd5262487a976f 226 PANTHER PTHR11749 3 226 8.3E-115 T 19-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ALIDE2_RS21805 edb79f7a6af28fe33acd5262487a976f 226 Gene3D G3DSA:3.20.20.70 3 225 1.0E-90 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS21805 edb79f7a6af28fe33acd5262487a976f 226 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 142 164 - T 19-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ALIDE2_RS21805 edb79f7a6af28fe33acd5262487a976f 226 PANTHER PTHR11749:SF7 3 226 8.3E-115 T 19-04-2016 ALIDE2_RS21805 edb79f7a6af28fe33acd5262487a976f 226 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 209 1.6E-84 T 19-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ALIDE2_RS21805 edb79f7a6af28fe33acd5262487a976f 226 PIRSF PIRSF001461 1 226 5.1E-99 T 19-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ALIDE2_RS21840 0cd91312cce7f1e25950d8d5289f509f 158 SUPERFAMILY SSF54523 20 120 5.1E-23 T 19-04-2016 ALIDE2_RS21840 0cd91312cce7f1e25950d8d5289f509f 158 Gene3D G3DSA:3.30.700.10 20 122 8.2E-22 T 19-04-2016 ALIDE2_RS21840 0cd91312cce7f1e25950d8d5289f509f 158 PANTHER PTHR30093:SF4 16 76 1.2E-17 T 19-04-2016 ALIDE2_RS21840 0cd91312cce7f1e25950d8d5289f509f 158 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 16 39 3.1E-8 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS21840 0cd91312cce7f1e25950d8d5289f509f 158 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 41 123 7.7E-13 T 19-04-2016 IPR031982 Type IV minor pilin ComP ALIDE2_RS21840 0cd91312cce7f1e25950d8d5289f509f 158 PRINTS PR00813 Bacterial general secretion pathway protein G signature 19 44 1.3E-8 T 19-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ALIDE2_RS21840 0cd91312cce7f1e25950d8d5289f509f 158 PRINTS PR00813 Bacterial general secretion pathway protein G signature 55 73 1.3E-8 T 19-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ALIDE2_RS21840 0cd91312cce7f1e25950d8d5289f509f 158 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 19 40 5.7E-9 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS21840 0cd91312cce7f1e25950d8d5289f509f 158 PANTHER PTHR30093 16 76 1.2E-17 T 19-04-2016 ALIDE2_RS17340 e1862a1b782d3535cc3046d5a18e18da 398 SUPERFAMILY SSF56645 6 242 3.66E-78 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS17340 e1862a1b782d3535cc3046d5a18e18da 398 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 349 368 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS17340 e1862a1b782d3535cc3046d5a18e18da 398 PANTHER PTHR10909:SF307 1 398 8.7E-267 T 19-04-2016 ALIDE2_RS17340 e1862a1b782d3535cc3046d5a18e18da 398 Gene3D G3DSA:1.20.140.10 231 392 8.3E-44 T 19-04-2016 ALIDE2_RS17340 e1862a1b782d3535cc3046d5a18e18da 398 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 389 4.5E-28 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS17340 e1862a1b782d3535cc3046d5a18e18da 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 131 1.2E-34 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS17340 e1862a1b782d3535cc3046d5a18e18da 398 Gene3D G3DSA:1.10.540.10 4 132 1.9E-44 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS17340 e1862a1b782d3535cc3046d5a18e18da 398 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 231 3.4E-22 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS17340 e1862a1b782d3535cc3046d5a18e18da 398 Gene3D G3DSA:2.40.110.10 134 230 6.6E-32 T 19-04-2016 ALIDE2_RS17340 e1862a1b782d3535cc3046d5a18e18da 398 SUPERFAMILY SSF47203 246 393 1.77E-41 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS17340 e1862a1b782d3535cc3046d5a18e18da 398 PANTHER PTHR10909 1 398 8.7E-267 T 19-04-2016 ALIDE2_RS23425 124f4f8220c1d85a91d835ec2948cc88 333 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 54 323 1.4E-107 T 19-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 ALIDE2_RS23425 124f4f8220c1d85a91d835ec2948cc88 333 PANTHER PTHR38418 43 329 2.4E-36 T 19-04-2016 ALIDE2_RS23425 124f4f8220c1d85a91d835ec2948cc88 333 Pfam PF01380 SIS domain 50 181 3.5E-32 T 19-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 ALIDE2_RS23425 124f4f8220c1d85a91d835ec2948cc88 333 PANTHER PTHR38418:SF1 43 329 2.4E-36 T 19-04-2016 ALIDE2_RS23425 124f4f8220c1d85a91d835ec2948cc88 333 SUPERFAMILY SSF53697 19 330 1.31E-64 T 19-04-2016 ALIDE2_RS23425 124f4f8220c1d85a91d835ec2948cc88 333 PIRSF PIRSF004692 4 333 6.3E-128 T 19-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 ALIDE2_RS23425 124f4f8220c1d85a91d835ec2948cc88 333 Gene3D G3DSA:3.40.50.10490 21 203 3.3E-51 T 19-04-2016 ALIDE2_RS23425 124f4f8220c1d85a91d835ec2948cc88 333 Gene3D G3DSA:3.10.580.10 204 330 2.8E-38 T 19-04-2016 ALIDE2_RS23425 124f4f8220c1d85a91d835ec2948cc88 333 Pfam PF00571 CBS domain 278 330 3.3E-7 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS23425 124f4f8220c1d85a91d835ec2948cc88 333 Pfam PF00571 CBS domain 210 266 1.7E-8 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS23425 124f4f8220c1d85a91d835ec2948cc88 333 SMART SM00116 219 267 0.0066 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS23425 124f4f8220c1d85a91d835ec2948cc88 333 SMART SM00116 284 332 0.0085 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS03020 fef92d44f8a49459004888df86e49fc9 353 Gene3D G3DSA:3.90.25.10 189 347 2.6E-54 T 19-04-2016 ALIDE2_RS03020 fef92d44f8a49459004888df86e49fc9 353 PANTHER PTHR10366 1 350 5.7E-163 T 19-04-2016 ALIDE2_RS03020 fef92d44f8a49459004888df86e49fc9 353 Gene3D G3DSA:3.40.50.720 2 188 2.1E-59 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03020 fef92d44f8a49459004888df86e49fc9 353 PANTHER PTHR10366:SF41 1 350 5.7E-163 T 19-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 ALIDE2_RS03020 fef92d44f8a49459004888df86e49fc9 353 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 323 3.6E-97 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03020 fef92d44f8a49459004888df86e49fc9 353 SUPERFAMILY SSF51735 2 347 1.44E-85 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03020 fef92d44f8a49459004888df86e49fc9 353 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 337 1.0E-148 T 19-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 ALIDE2_RS00165 4036fbf45274eb5a7e0e47cd203883e7 321 PIRSF PIRSF017082 1 321 1.7E-84 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00165 4036fbf45274eb5a7e0e47cd203883e7 321 SUPERFAMILY SSF53850 108 282 1.19E-11 T 19-04-2016 ALIDE2_RS00165 4036fbf45274eb5a7e0e47cd203883e7 321 PANTHER PTHR30349 3 307 1.1E-100 T 19-04-2016 ALIDE2_RS00165 4036fbf45274eb5a7e0e47cd203883e7 321 PANTHER PTHR30349:SF16 3 307 1.1E-100 T 19-04-2016 ALIDE2_RS00165 4036fbf45274eb5a7e0e47cd203883e7 321 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 316 2.0E-95 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS06730 cd48bd066ebd7eb32d8db4c6d28695b4 442 Pfam PF00202 Aminotransferase class-III 23 427 1.0E-84 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ALIDE2_RS06730 cd48bd066ebd7eb32d8db4c6d28695b4 442 PANTHER PTHR11986:SF87 1 435 1.7E-160 T 19-04-2016 ALIDE2_RS06730 cd48bd066ebd7eb32d8db4c6d28695b4 442 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 238 275 - T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ALIDE2_RS06730 cd48bd066ebd7eb32d8db4c6d28695b4 442 Gene3D G3DSA:3.40.640.10 57 313 1.0E-61 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS06730 cd48bd066ebd7eb32d8db4c6d28695b4 442 Gene3D G3DSA:3.90.1150.10 314 429 8.8E-35 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS06730 cd48bd066ebd7eb32d8db4c6d28695b4 442 PANTHER PTHR11986 1 435 1.7E-160 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ALIDE2_RS06730 cd48bd066ebd7eb32d8db4c6d28695b4 442 SUPERFAMILY SSF53383 19 429 6.86E-107 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS20745 52cfb6c8ffd60cb2642c78fa4f0402ae 628 ProSitePatterns PS00211 ABC transporters family signature. 434 448 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS20745 52cfb6c8ffd60cb2642c78fa4f0402ae 628 SMART SM00382 28 220 7.2E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS20745 52cfb6c8ffd60cb2642c78fa4f0402ae 628 SMART SM00382 337 508 2.0E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS20745 52cfb6c8ffd60cb2642c78fa4f0402ae 628 PANTHER PTHR19211:SF45 1 569 2.4E-206 T 19-04-2016 ALIDE2_RS20745 52cfb6c8ffd60cb2642c78fa4f0402ae 628 SUPERFAMILY SSF52540 9 221 6.79E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20745 52cfb6c8ffd60cb2642c78fa4f0402ae 628 PANTHER PTHR19211 1 569 2.4E-206 T 19-04-2016 ALIDE2_RS20745 52cfb6c8ffd60cb2642c78fa4f0402ae 628 SUPERFAMILY SSF52540 308 509 3.91E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20745 52cfb6c8ffd60cb2642c78fa4f0402ae 628 Pfam PF16326 ABC transporter C-terminal domain 559 627 2.0E-20 T 19-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 ALIDE2_RS20745 52cfb6c8ffd60cb2642c78fa4f0402ae 628 Pfam PF00005 ABC transporter 19 175 3.4E-25 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS20745 52cfb6c8ffd60cb2642c78fa4f0402ae 628 Pfam PF00005 ABC transporter 329 462 4.3E-23 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS20745 52cfb6c8ffd60cb2642c78fa4f0402ae 628 Gene3D G3DSA:3.40.50.300 314 546 2.3E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20745 52cfb6c8ffd60cb2642c78fa4f0402ae 628 Gene3D G3DSA:3.40.50.300 5 272 6.1E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20745 52cfb6c8ffd60cb2642c78fa4f0402ae 628 Pfam PF12848 ABC transporter 214 282 3.3E-12 T 19-04-2016 IPR032781 ABC-transporter extension domain ALIDE2_RS05705 336576d33f5a1eced289d30b4ab045f8 356 Gene3D G3DSA:3.20.20.70 2 347 1.1E-122 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS05705 336576d33f5a1eced289d30b4ab045f8 356 PANTHER PTHR22893:SF7 2 350 1.4E-155 T 19-04-2016 ALIDE2_RS05705 336576d33f5a1eced289d30b4ab045f8 356 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 337 6.3E-67 T 19-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ALIDE2_RS05705 336576d33f5a1eced289d30b4ab045f8 356 PANTHER PTHR22893 2 350 1.4E-155 T 19-04-2016 ALIDE2_RS05705 336576d33f5a1eced289d30b4ab045f8 356 SUPERFAMILY SSF51395 1 349 3.38E-111 T 19-04-2016 ALIDE2_RS07380 928cb053aec0023777f12cb514264ded 227 PANTHER PTHR23026 10 216 5.4E-40 T 19-04-2016 ALIDE2_RS07380 928cb053aec0023777f12cb514264ded 227 Gene3D G3DSA:3.40.109.10 9 225 1.4E-34 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 ALIDE2_RS07380 928cb053aec0023777f12cb514264ded 227 Pfam PF00881 Nitroreductase family 16 203 1.2E-23 T 19-04-2016 IPR029479 Nitroreductase ALIDE2_RS07380 928cb053aec0023777f12cb514264ded 227 SUPERFAMILY SSF55469 11 225 2.22E-39 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 ALIDE2_RS07380 928cb053aec0023777f12cb514264ded 227 PANTHER PTHR23026:SF90 10 216 5.4E-40 T 19-04-2016 ALIDE2_RS04710 962ed7630f7e44be8ed403df8fab2725 208 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 93 2.0E-41 T 19-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 ALIDE2_RS04710 962ed7630f7e44be8ed403df8fab2725 208 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 186 6.1E-19 T 19-04-2016 IPR020057 Ribosomal protein L25, beta domain ALIDE2_RS04710 962ed7630f7e44be8ed403df8fab2725 208 PANTHER PTHR33284 8 205 2.9E-47 T 19-04-2016 ALIDE2_RS04710 962ed7630f7e44be8ed403df8fab2725 208 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 5 171 2.7E-37 T 19-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 ALIDE2_RS04710 962ed7630f7e44be8ed403df8fab2725 208 Gene3D G3DSA:2.40.240.10 2 93 2.2E-31 T 19-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 ALIDE2_RS04710 962ed7630f7e44be8ed403df8fab2725 208 SUPERFAMILY SSF50715 2 191 7.06E-49 T 19-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 ALIDE2_RS04710 962ed7630f7e44be8ed403df8fab2725 208 Gene3D G3DSA:2.170.120.20 97 191 6.5E-20 T 19-04-2016 IPR020057 Ribosomal protein L25, beta domain ALIDE2_RS04710 962ed7630f7e44be8ed403df8fab2725 208 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 1 184 27.489 T 19-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 ALIDE2_RS04710 962ed7630f7e44be8ed403df8fab2725 208 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 93 21.544 T 19-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 ALIDE2_RS04710 962ed7630f7e44be8ed403df8fab2725 208 Pfam PF01386 Ribosomal L25p family 5 90 2.0E-24 T 19-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 ALIDE2_RS21095 d1790f96b16fea80b8778f93de23e31d 326 PANTHER PTHR30349 8 292 1.8E-63 T 19-04-2016 ALIDE2_RS21095 d1790f96b16fea80b8778f93de23e31d 326 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 30 3.6E-5 T 19-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ALIDE2_RS21095 d1790f96b16fea80b8778f93de23e31d 326 SUPERFAMILY SSF53850 118 292 1.96E-9 T 19-04-2016 ALIDE2_RS21095 d1790f96b16fea80b8778f93de23e31d 326 PIRSF PIRSF017082 1 326 5.7E-66 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS21095 d1790f96b16fea80b8778f93de23e31d 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 322 9.1E-67 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS21095 d1790f96b16fea80b8778f93de23e31d 326 PANTHER PTHR30349:SF1 8 292 1.8E-63 T 19-04-2016 ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 SUPERFAMILY SSF51735 122 280 7.08E-51 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.9E-85 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.9E-85 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.9E-85 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.9E-85 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.9E-85 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.9E-85 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.9E-85 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 19-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 37.989 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 8.4E-43 T 19-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 Gene3D G3DSA:3.40.50.720 140 264 7.9E-53 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 1.6E-67 T 19-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 Gene3D G3DSA:3.40.192.10 7 139 1.1E-49 T 19-04-2016 ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 SUPERFAMILY SSF53223 1 121 2.88E-42 T 19-04-2016 ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 PANTHER PTHR10025 1 282 6.9E-161 T 19-04-2016 ALIDE2_RS12030 6c4b651c81c8c42bf7023e6a9405e2ce 282 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 19-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 ALIDE2_RS16100 384a001e13118539d67b37e6a3f22f01 699 Gene3D G3DSA:3.90.226.10 4 282 1.4E-60 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS16100 384a001e13118539d67b37e6a3f22f01 699 Gene3D G3DSA:1.10.1040.10 615 698 3.9E-14 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS16100 384a001e13118539d67b37e6a3f22f01 699 Gene3D G3DSA:3.40.50.720 293 481 7.1E-62 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS16100 384a001e13118539d67b37e6a3f22f01 699 SUPERFAMILY SSF48179 602 698 1.62E-20 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS16100 384a001e13118539d67b37e6a3f22f01 699 PANTHER PTHR23309:SF9 1 699 0.0 T 19-04-2016 ALIDE2_RS16100 384a001e13118539d67b37e6a3f22f01 699 SUPERFAMILY SSF48179 479 621 1.02E-25 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS16100 384a001e13118539d67b37e6a3f22f01 699 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 480 572 7.1E-23 T 19-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS16100 384a001e13118539d67b37e6a3f22f01 699 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 608 696 6.3E-6 T 19-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS16100 384a001e13118539d67b37e6a3f22f01 699 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 162 1.6E-36 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS16100 384a001e13118539d67b37e6a3f22f01 699 SUPERFAMILY SSF52096 5 291 2.03E-63 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS16100 384a001e13118539d67b37e6a3f22f01 699 SUPERFAMILY SSF51735 296 475 3.74E-58 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS16100 384a001e13118539d67b37e6a3f22f01 699 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 299 475 9.0E-63 T 19-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS16100 384a001e13118539d67b37e6a3f22f01 699 PANTHER PTHR23309 1 699 0.0 T 19-04-2016 ALIDE2_RS16100 384a001e13118539d67b37e6a3f22f01 699 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 92 112 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS16100 384a001e13118539d67b37e6a3f22f01 699 Gene3D G3DSA:1.10.1040.10 482 572 1.0E-19 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS01155 bad72aa4f943b07e1cd6dc0f6f52f327 280 SUPERFAMILY SSF48657 67 171 1.83E-28 T 19-04-2016 IPR016103 ProQ/FinO domain ALIDE2_RS01155 bad72aa4f943b07e1cd6dc0f6f52f327 280 Gene3D G3DSA:1.10.1710.10 49 173 3.3E-33 T 19-04-2016 IPR016103 ProQ/FinO domain ALIDE2_RS01155 bad72aa4f943b07e1cd6dc0f6f52f327 280 Pfam PF04352 ProQ/FINO family 76 173 5.7E-26 T 19-04-2016 IPR016103 ProQ/FinO domain ALIDE2_RS01155 bad72aa4f943b07e1cd6dc0f6f52f327 280 SMART SM00945 71 181 1.1E-39 T 19-04-2016 IPR016103 ProQ/FinO domain ALIDE2_RS09555 3b8d7a01f421a2507753b016fbbd20a3 79 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 4 79 5.0E-29 T 19-04-2016 IPR021676 Protein of unknown function DUF3262 ALIDE2_RS09555 3b8d7a01f421a2507753b016fbbd20a3 79 Pfam PF11660 Protein of unknown function (DUF3262) 4 78 7.3E-24 T 19-04-2016 IPR021676 Protein of unknown function DUF3262 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 SUPERFAMILY SSF81923 1 143 3.01E-57 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.5E-14 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 Pfam PF07724 AAA domain (Cdc48 subfamily) 492 653 1.8E-47 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 659 739 6.2E-23 T 19-04-2016 IPR019489 Clp ATPase, C-terminal ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 Gene3D G3DSA:3.40.50.300 175 355 3.8E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 Gene3D G3DSA:1.10.8.60 671 747 2.3E-27 T 19-04-2016 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 SUPERFAMILY SSF52540 174 427 1.82E-67 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 217 329 7.8E-12 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 308 320 - T 19-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 Gene3D G3DSA:1.10.1780.10 1 143 5.1E-41 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 Gene3D G3DSA:1.10.8.60 358 441 3.0E-29 T 19-04-2016 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 SMART SM01086 659 750 7.1E-31 T 19-04-2016 IPR019489 Clp ATPase, C-terminal ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 740 0.0 T 19-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 SUPERFAMILY SSF52540 443 742 5.4E-79 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 Gene3D G3DSA:3.40.50.300 448 670 4.3E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 SMART SM00382 212 356 6.4E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 SMART SM00382 493 660 2.3E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 PANTHER PTHR11638:SF111 1 772 0.0 T 19-04-2016 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 539 557 2.9E-38 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 568 586 2.9E-38 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 497 515 2.9E-38 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 615 2.9E-38 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 PANTHER PTHR11638 1 772 0.0 T 19-04-2016 ALIDE2_RS14995 744a478e53aa8653120d5f8b0c8ab30b 782 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 524 542 - T 19-04-2016 IPR028299 ClpA/B, conserved site 2 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 Gene3D G3DSA:3.30.420.40 216 408 5.1E-68 T 19-04-2016 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 PANTHER PTHR21060 39 418 9.0E-147 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 PANTHER PTHR21060:SF11 39 418 9.0E-147 T 19-04-2016 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 TIGRFAM TIGR00016 ackA: acetate kinase 82 408 1.2E-108 T 19-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 PIRSF PIRSF000722 66 412 1.4E-113 T 19-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 Hamap MF_00020 Acetate kinase [ackA]. 1 412 130.655 T 19-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 SUPERFAMILY SSF53067 41 201 2.78E-47 T 19-04-2016 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 SUPERFAMILY SSF53067 168 411 7.97E-72 T 19-04-2016 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 Pfam PF00871 Acetokinase family 72 402 7.0E-108 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 Gene3D G3DSA:3.30.420.40 41 215 2.1E-15 T 19-04-2016 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 PRINTS PR00471 Acetate kinase family signature 43 54 2.6E-36 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 PRINTS PR00471 Acetate kinase family signature 184 197 2.6E-36 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 PRINTS PR00471 Acetate kinase family signature 311 324 2.6E-36 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 PRINTS PR00471 Acetate kinase family signature 333 349 2.6E-36 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 PRINTS PR00471 Acetate kinase family signature 390 402 2.6E-36 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 PRINTS PR00471 Acetate kinase family signature 214 235 2.6E-36 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS13490 ae2fcdc1539a08d16b4dd2fc7e9df13f 421 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 214 231 - T 19-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 ALIDE2_RS11000 55c013b72b563acb1913764387a58144 234 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS11000 55c013b72b563acb1913764387a58144 234 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 108 3.4E-33 T 19-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 ALIDE2_RS11000 55c013b72b563acb1913764387a58144 234 Gene3D G3DSA:1.10.1060.10 103 232 1.0E-47 T 19-04-2016 ALIDE2_RS11000 55c013b72b563acb1913764387a58144 234 PANTHER PTHR11921:SF29 3 232 1.1E-131 T 19-04-2016 ALIDE2_RS11000 55c013b72b563acb1913764387a58144 234 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 226 2.2E-85 T 19-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 ALIDE2_RS11000 55c013b72b563acb1913764387a58144 234 SUPERFAMILY SSF46548 103 232 3.66E-40 T 19-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 ALIDE2_RS11000 55c013b72b563acb1913764387a58144 234 SUPERFAMILY SSF54292 2 102 6.46E-29 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS11000 55c013b72b563acb1913764387a58144 234 Gene3D G3DSA:3.10.20.30 1 102 7.1E-39 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS11000 55c013b72b563acb1913764387a58144 234 Pfam PF13237 4Fe-4S dicluster domain 144 213 2.2E-9 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS11000 55c013b72b563acb1913764387a58144 234 PANTHER PTHR11921 3 232 1.1E-131 T 19-04-2016 ALIDE2_RS07090 2848531c8c60dc77b97c59f3788843fa 458 Gene3D G3DSA:3.90.170.10 289 451 3.8E-61 T 19-04-2016 ALIDE2_RS07090 2848531c8c60dc77b97c59f3788843fa 458 Gene3D G3DSA:1.10.300.10 107 218 1.3E-30 T 19-04-2016 ALIDE2_RS07090 2848531c8c60dc77b97c59f3788843fa 458 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 140 151 - T 19-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 ALIDE2_RS07090 2848531c8c60dc77b97c59f3788843fa 458 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 458 201.505 T 19-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 ALIDE2_RS07090 2848531c8c60dc77b97c59f3788843fa 458 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 15 22 - T 19-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 ALIDE2_RS07090 2848531c8c60dc77b97c59f3788843fa 458 SMART SM00788 8 450 1.8E-280 T 19-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 ALIDE2_RS07090 2848531c8c60dc77b97c59f3788843fa 458 Pfam PF00709 Adenylosuccinate synthetase 9 449 2.1E-166 T 19-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 ALIDE2_RS07090 2848531c8c60dc77b97c59f3788843fa 458 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 10 455 5.4E-161 T 19-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 ALIDE2_RS07090 2848531c8c60dc77b97c59f3788843fa 458 Gene3D G3DSA:3.40.440.10 8 98 1.8E-69 T 19-04-2016 ALIDE2_RS07090 2848531c8c60dc77b97c59f3788843fa 458 Gene3D G3DSA:3.40.440.10 219 288 1.8E-69 T 19-04-2016 ALIDE2_RS07090 2848531c8c60dc77b97c59f3788843fa 458 SUPERFAMILY SSF52540 8 455 1.03E-161 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07090 2848531c8c60dc77b97c59f3788843fa 458 PANTHER PTHR11846 1 454 2.4E-222 T 19-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 SUPERFAMILY SSF51735 4 248 2.28E-78 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 246 4.7E-64 T 19-04-2016 ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 PANTHER PTHR24322 155 186 6.8E-46 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 PANTHER PTHR24322 10 137 6.8E-46 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.8E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.8E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.8E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 0.0044 T 19-04-2016 ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 Gene3D G3DSA:3.40.50.720 3 248 6.9E-81 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 4.8E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.8E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.8E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.8E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.8E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12795 3bc3ca04930e55f711f13c0471fae328 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.8E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22240 616c85b517f38c0bf83e762e0fb85cbb 318 SUPERFAMILY SSF52266 59 239 1.07E-7 T 19-04-2016 IPR013830 SGNH hydrolase-type esterase domain ALIDE2_RS22240 616c85b517f38c0bf83e762e0fb85cbb 318 SUPERFAMILY SSF52266 280 317 1.07E-7 T 19-04-2016 IPR013830 SGNH hydrolase-type esterase domain ALIDE2_RS22240 616c85b517f38c0bf83e762e0fb85cbb 318 PANTHER PTHR22835:SF222 6 311 6.8E-16 T 19-04-2016 ALIDE2_RS22240 616c85b517f38c0bf83e762e0fb85cbb 318 Gene3D G3DSA:3.40.50.1110 23 316 1.3E-46 T 19-04-2016 IPR013830 SGNH hydrolase-type esterase domain ALIDE2_RS22240 616c85b517f38c0bf83e762e0fb85cbb 318 PANTHER PTHR22835 6 311 6.8E-16 T 19-04-2016 ALIDE2_RS22355 a592b9bd5d68f057ef3f64e8f8f567ee 335 PANTHER PTHR30349:SF32 12 295 2.6E-73 T 19-04-2016 ALIDE2_RS22355 a592b9bd5d68f057ef3f64e8f8f567ee 335 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 57 330 3.3E-69 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22355 a592b9bd5d68f057ef3f64e8f8f567ee 335 SUPERFAMILY SSF53850 121 294 1.32E-8 T 19-04-2016 ALIDE2_RS22355 a592b9bd5d68f057ef3f64e8f8f567ee 335 PIRSF PIRSF017082 3 334 2.6E-72 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22355 a592b9bd5d68f057ef3f64e8f8f567ee 335 PANTHER PTHR30349 12 295 2.6E-73 T 19-04-2016 ALIDE2_RS06830 a0b373a2dcd432cac72457b6d97545f0 873 Pfam PF04205 FMN-binding domain 102 185 3.9E-5 T 19-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 ALIDE2_RS06830 a0b373a2dcd432cac72457b6d97545f0 873 SUPERFAMILY SSF54862 505 526 1.55E-8 T 19-04-2016 ALIDE2_RS06830 a0b373a2dcd432cac72457b6d97545f0 873 SUPERFAMILY SSF54862 574 675 1.55E-8 T 19-04-2016 ALIDE2_RS06830 a0b373a2dcd432cac72457b6d97545f0 873 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 645 656 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS06830 a0b373a2dcd432cac72457b6d97545f0 873 PANTHER PTHR30224:SF4 381 699 9.8E-121 T 19-04-2016 ALIDE2_RS06830 a0b373a2dcd432cac72457b6d97545f0 873 PANTHER PTHR30224:SF4 53 365 9.8E-121 T 19-04-2016 ALIDE2_RS06830 a0b373a2dcd432cac72457b6d97545f0 873 Gene3D G3DSA:3.30.70.20 612 694 2.5E-6 T 19-04-2016 ALIDE2_RS06830 a0b373a2dcd432cac72457b6d97545f0 873 Pfam PF12801 4Fe-4S binding domain 493 538 4.1E-14 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS06830 a0b373a2dcd432cac72457b6d97545f0 873 Pfam PF12801 4Fe-4S binding domain 597 629 1.4E-5 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS06830 a0b373a2dcd432cac72457b6d97545f0 873 SMART SM00900 98 192 1.7E-12 T 19-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 ALIDE2_RS06830 a0b373a2dcd432cac72457b6d97545f0 873 PANTHER PTHR30224 381 699 9.8E-121 T 19-04-2016 ALIDE2_RS06830 a0b373a2dcd432cac72457b6d97545f0 873 PANTHER PTHR30224 53 365 9.8E-121 T 19-04-2016 ALIDE2_RS05815 82b1c4062fe29cc0792f8c8f12613241 394 PANTHER PTHR18919:SF14 1 394 3.8E-210 T 19-04-2016 ALIDE2_RS05815 82b1c4062fe29cc0792f8c8f12613241 394 Pfam PF02803 Thiolase, C-terminal domain 272 392 1.5E-42 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS05815 82b1c4062fe29cc0792f8c8f12613241 394 PIRSF PIRSF000429 1 394 6.0E-110 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS05815 82b1c4062fe29cc0792f8c8f12613241 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 19-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 ALIDE2_RS05815 82b1c4062fe29cc0792f8c8f12613241 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 392 3.0E-113 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS05815 82b1c4062fe29cc0792f8c8f12613241 394 SUPERFAMILY SSF53901 1 268 6.04E-60 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05815 82b1c4062fe29cc0792f8c8f12613241 394 SUPERFAMILY SSF53901 273 393 8.95E-40 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05815 82b1c4062fe29cc0792f8c8f12613241 394 Pfam PF00108 Thiolase, N-terminal domain 5 262 5.6E-50 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS05815 82b1c4062fe29cc0792f8c8f12613241 394 PANTHER PTHR18919 1 394 3.8E-210 T 19-04-2016 ALIDE2_RS05815 82b1c4062fe29cc0792f8c8f12613241 394 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 19-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 ALIDE2_RS05815 82b1c4062fe29cc0792f8c8f12613241 394 Gene3D G3DSA:3.40.47.10 146 185 1.1E-57 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05815 82b1c4062fe29cc0792f8c8f12613241 394 Gene3D G3DSA:3.40.47.10 278 392 1.1E-57 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05815 82b1c4062fe29cc0792f8c8f12613241 394 Gene3D G3DSA:3.40.47.10 4 125 1.4E-52 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05815 82b1c4062fe29cc0792f8c8f12613241 394 Gene3D G3DSA:3.40.47.10 186 276 1.4E-52 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05815 82b1c4062fe29cc0792f8c8f12613241 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 19-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 ALIDE2_RS11720 0e904d53606fd092e948086a6b94f7a8 275 PANTHER PTHR21091 21 259 6.3E-70 T 19-04-2016 ALIDE2_RS11720 0e904d53606fd092e948086a6b94f7a8 275 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 27 238 1.5E-47 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 ALIDE2_RS11720 0e904d53606fd092e948086a6b94f7a8 275 Gene3D G3DSA:3.40.1010.10 25 141 7.3E-43 T 19-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 ALIDE2_RS11720 0e904d53606fd092e948086a6b94f7a8 275 PANTHER PTHR21091:SF16 21 259 6.3E-70 T 19-04-2016 ALIDE2_RS11720 0e904d53606fd092e948086a6b94f7a8 275 SUPERFAMILY SSF53790 21 265 4.45E-77 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 ALIDE2_RS11720 0e904d53606fd092e948086a6b94f7a8 275 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 26 261 2.2E-88 T 19-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 ALIDE2_RS11720 0e904d53606fd092e948086a6b94f7a8 275 Gene3D G3DSA:3.30.950.10 142 265 2.8E-47 T 19-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 ALIDE2_RS11720 0e904d53606fd092e948086a6b94f7a8 275 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 31 45 - T 19-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 Gene3D G3DSA:1.10.8.60 778 852 4.2E-25 T 19-04-2016 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 333 1.9E-13 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 Gene3D G3DSA:1.10.1780.10 1 146 1.0E-41 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 Gene3D G3DSA:3.40.50.300 157 340 2.1E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 710 724 1.4E-42 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 666 1.4E-42 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 603 621 1.4E-42 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 677 695 1.4E-42 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 PANTHER PTHR11638:SF18 1 850 0.0 T 19-04-2016 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 850 0.0 T 19-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 PANTHER PTHR11638 1 850 0.0 T 19-04-2016 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 845 1.7E-22 T 19-04-2016 IPR019489 Clp ATPase, C-terminal ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 SUPERFAMILY SSF81923 4 154 1.96E-37 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 633 651 - T 19-04-2016 IPR028299 ClpA/B, conserved site 2 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 SUPERFAMILY SSF52540 548 849 7.65E-81 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 SUPERFAMILY SSF52540 157 546 8.03E-99 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 143 5.8E-12 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 67 4.7E-10 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 SMART SM01086 767 858 6.4E-33 T 19-04-2016 IPR019489 Clp ATPase, C-terminal ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 Gene3D G3DSA:1.10.8.60 341 426 4.2E-37 T 19-04-2016 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 Gene3D G3DSA:3.40.50.300 552 777 1.3E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 292 304 - T 19-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 Pfam PF07724 AAA domain (Cdc48 subfamily) 598 760 4.1E-54 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 SMART SM00382 599 741 6.5E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS05920 d301d4e28f97a50892e72c19b8ae2eaa 867 SMART SM00382 196 341 6.7E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS06860 558d3cf5add967021b3470a7318807f8 98 Gene3D G3DSA:4.10.430.10 64 91 2.9E-8 T 19-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ALIDE2_RS06860 558d3cf5add967021b3470a7318807f8 98 SMART SM00528 59 98 1.9E-6 T 19-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ALIDE2_RS06860 558d3cf5add967021b3470a7318807f8 98 SUPERFAMILY SSF81273 64 95 6.28E-9 T 19-04-2016 ALIDE2_RS06860 558d3cf5add967021b3470a7318807f8 98 Pfam PF00816 H-NS histone family 7 91 8.8E-27 T 19-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 ALIDE2_RS06845 b1acf24c534c04fb4eff398e73dbb4a8 137 SUPERFAMILY SSF46626 55 135 8.55E-18 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS06845 b1acf24c534c04fb4eff398e73dbb4a8 137 PANTHER PTHR40942 38 137 4.5E-32 T 19-04-2016 ALIDE2_RS06845 b1acf24c534c04fb4eff398e73dbb4a8 137 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 53 132 1.4E-15 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS06845 b1acf24c534c04fb4eff398e73dbb4a8 137 PRINTS PR00607 Class IE cytochrome C signature 122 133 1.3E-13 T 19-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 ALIDE2_RS06845 b1acf24c534c04fb4eff398e73dbb4a8 137 PRINTS PR00607 Class IE cytochrome C signature 64 75 1.3E-13 T 19-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 ALIDE2_RS06845 b1acf24c534c04fb4eff398e73dbb4a8 137 PRINTS PR00607 Class IE cytochrome C signature 75 85 1.3E-13 T 19-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 ALIDE2_RS06845 b1acf24c534c04fb4eff398e73dbb4a8 137 PRINTS PR00607 Class IE cytochrome C signature 107 119 1.3E-13 T 19-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 ALIDE2_RS06845 b1acf24c534c04fb4eff398e73dbb4a8 137 PANTHER PTHR40942:SF1 38 137 4.5E-32 T 19-04-2016 ALIDE2_RS06845 b1acf24c534c04fb4eff398e73dbb4a8 137 Gene3D G3DSA:1.10.760.10 54 134 1.4E-30 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS07880 ec57785ad06dd9b98af691b984b83f7c 350 Gene3D G3DSA:3.40.50.300 134 318 3.5E-48 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07880 ec57785ad06dd9b98af691b984b83f7c 350 Pfam PF00437 Type II/IV secretion system protein 27 293 3.5E-77 T 19-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ALIDE2_RS07880 ec57785ad06dd9b98af691b984b83f7c 350 SUPERFAMILY SSF52540 26 292 4.41E-34 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07880 ec57785ad06dd9b98af691b984b83f7c 350 Gene3D G3DSA:3.30.450.90 28 119 7.9E-13 T 19-04-2016 ALIDE2_RS07880 ec57785ad06dd9b98af691b984b83f7c 350 PANTHER PTHR30258:SF12 24 316 1.8E-87 T 19-04-2016 ALIDE2_RS07880 ec57785ad06dd9b98af691b984b83f7c 350 PANTHER PTHR30258 24 316 1.8E-87 T 19-04-2016 ALIDE2_RS07880 ec57785ad06dd9b98af691b984b83f7c 350 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 15 314 1.2E-119 T 19-04-2016 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 ALIDE2_RS04635 67b1074443864205738cd5ecf4da5d66 293 PANTHER PTHR22911:SF61 8 287 1.0E-41 T 19-04-2016 ALIDE2_RS04635 67b1074443864205738cd5ecf4da5d66 293 SUPERFAMILY SSF103481 34 139 4.97E-14 T 19-04-2016 ALIDE2_RS04635 67b1074443864205738cd5ecf4da5d66 293 Pfam PF00892 EamA-like transporter family 156 290 3.9E-9 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS04635 67b1074443864205738cd5ecf4da5d66 293 Pfam PF00892 EamA-like transporter family 7 135 9.7E-10 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS04635 67b1074443864205738cd5ecf4da5d66 293 PANTHER PTHR22911 8 287 1.0E-41 T 19-04-2016 ALIDE2_RS04635 67b1074443864205738cd5ecf4da5d66 293 SUPERFAMILY SSF103481 197 292 3.4E-10 T 19-04-2016 ALIDE2_RS05120 9617f3168f6d4f0c24845d8e6fec749e 238 PANTHER PTHR11922:SF11 6 208 1.1E-41 T 19-04-2016 ALIDE2_RS05120 9617f3168f6d4f0c24845d8e6fec749e 238 SUPERFAMILY SSF52317 26 229 3.7E-41 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS05120 9617f3168f6d4f0c24845d8e6fec749e 238 Pfam PF00117 Glutamine amidotransferase class-I 25 182 8.0E-14 T 19-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 ALIDE2_RS05120 9617f3168f6d4f0c24845d8e6fec749e 238 Gene3D G3DSA:3.40.50.880 2 228 7.9E-51 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS05120 9617f3168f6d4f0c24845d8e6fec749e 238 PANTHER PTHR11922 6 208 1.1E-41 T 19-04-2016 ALIDE2_RS00995 5434f527dab540343236224e52e092e1 142 Pfam PF01527 Transposase 13 62 3.7E-10 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS00995 5434f527dab540343236224e52e092e1 142 Gene3D G3DSA:1.10.10.60 20 59 1.1E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS00995 5434f527dab540343236224e52e092e1 142 SUPERFAMILY SSF48295 12 62 5.75E-11 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 ALIDE2_RS19670 5434f527dab540343236224e52e092e1 142 Pfam PF01527 Transposase 13 62 3.7E-10 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS19670 5434f527dab540343236224e52e092e1 142 Gene3D G3DSA:1.10.10.60 20 59 1.1E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS19670 5434f527dab540343236224e52e092e1 142 SUPERFAMILY SSF48295 12 62 5.75E-11 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 ALIDE2_RS19110 5434f527dab540343236224e52e092e1 142 Pfam PF01527 Transposase 13 62 3.7E-10 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS19110 5434f527dab540343236224e52e092e1 142 Gene3D G3DSA:1.10.10.60 20 59 1.1E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS19110 5434f527dab540343236224e52e092e1 142 SUPERFAMILY SSF48295 12 62 5.75E-11 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 ALIDE2_RS15200 5434f527dab540343236224e52e092e1 142 Pfam PF01527 Transposase 13 62 3.7E-10 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS15200 5434f527dab540343236224e52e092e1 142 Gene3D G3DSA:1.10.10.60 20 59 1.1E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS15200 5434f527dab540343236224e52e092e1 142 SUPERFAMILY SSF48295 12 62 5.75E-11 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 ALIDE2_RS17495 5434f527dab540343236224e52e092e1 142 Pfam PF01527 Transposase 13 62 3.7E-10 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS17495 5434f527dab540343236224e52e092e1 142 Gene3D G3DSA:1.10.10.60 20 59 1.1E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS17495 5434f527dab540343236224e52e092e1 142 SUPERFAMILY SSF48295 12 62 5.75E-11 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 ALIDE2_RS01910 5434f527dab540343236224e52e092e1 142 Pfam PF01527 Transposase 13 62 3.7E-10 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS01910 5434f527dab540343236224e52e092e1 142 Gene3D G3DSA:1.10.10.60 20 59 1.1E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS01910 5434f527dab540343236224e52e092e1 142 SUPERFAMILY SSF48295 12 62 5.75E-11 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 ALIDE2_RS03385 5434f527dab540343236224e52e092e1 142 Pfam PF01527 Transposase 13 62 3.7E-10 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS03385 5434f527dab540343236224e52e092e1 142 Gene3D G3DSA:1.10.10.60 20 59 1.1E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS03385 5434f527dab540343236224e52e092e1 142 SUPERFAMILY SSF48295 12 62 5.75E-11 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 ALIDE2_RS13815 5434f527dab540343236224e52e092e1 142 Pfam PF01527 Transposase 13 62 3.7E-10 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS13815 5434f527dab540343236224e52e092e1 142 Gene3D G3DSA:1.10.10.60 20 59 1.1E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS13815 5434f527dab540343236224e52e092e1 142 SUPERFAMILY SSF48295 12 62 5.75E-11 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 ALIDE2_RS05700 0e9339a0172cd282e3b2c1a3bb74b22e 231 PANTHER PTHR10108 177 188 5.5E-21 T 19-04-2016 ALIDE2_RS05700 0e9339a0172cd282e3b2c1a3bb74b22e 231 PANTHER PTHR10108 7 129 5.5E-21 T 19-04-2016 ALIDE2_RS05700 0e9339a0172cd282e3b2c1a3bb74b22e 231 Gene3D G3DSA:3.40.50.150 12 195 8.8E-27 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS05700 0e9339a0172cd282e3b2c1a3bb74b22e 231 Pfam PF08241 Methyltransferase domain 25 120 2.9E-18 T 19-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 ALIDE2_RS05700 0e9339a0172cd282e3b2c1a3bb74b22e 231 SUPERFAMILY SSF53335 12 131 3.04E-27 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS01805 8f062f9eb4cd9e71aee8b6d7717c106f 89 Pfam PF00366 Ribosomal protein S17 14 79 6.4E-29 T 19-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01805 8f062f9eb4cd9e71aee8b6d7717c106f 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 85 24.033 T 19-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01805 8f062f9eb4cd9e71aee8b6d7717c106f 89 PANTHER PTHR10744 10 86 2.7E-30 T 19-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01805 8f062f9eb4cd9e71aee8b6d7717c106f 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 78 9.0E-29 T 19-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01805 8f062f9eb4cd9e71aee8b6d7717c106f 89 Gene3D G3DSA:2.40.50.140 9 86 7.9E-31 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS01805 8f062f9eb4cd9e71aee8b6d7717c106f 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 78 8.4E-34 T 19-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01805 8f062f9eb4cd9e71aee8b6d7717c106f 89 ProSitePatterns PS00056 Ribosomal protein S17 signature. 60 72 - T 19-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01805 8f062f9eb4cd9e71aee8b6d7717c106f 89 PRINTS PR00973 Ribosomal protein S17 family signature 28 51 8.1E-12 T 19-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01805 8f062f9eb4cd9e71aee8b6d7717c106f 89 PRINTS PR00973 Ribosomal protein S17 family signature 70 77 8.1E-12 T 19-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01805 8f062f9eb4cd9e71aee8b6d7717c106f 89 PRINTS PR00973 Ribosomal protein S17 family signature 60 70 8.1E-12 T 19-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01805 8f062f9eb4cd9e71aee8b6d7717c106f 89 SUPERFAMILY SSF50249 9 86 3.17E-29 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS19400 f480e199edab2f26ff11d3cc55527135 631 PANTHER PTHR12815 62 628 1.5E-49 T 19-04-2016 ALIDE2_RS19400 f480e199edab2f26ff11d3cc55527135 631 PANTHER PTHR12815:SF12 62 628 1.5E-49 T 19-04-2016 ALIDE2_RS19400 f480e199edab2f26ff11d3cc55527135 631 Gene3D G3DSA:2.40.160.50 490 631 6.2E-14 T 19-04-2016 ALIDE2_RS19400 f480e199edab2f26ff11d3cc55527135 631 Pfam PF01103 Surface antigen 419 630 5.2E-27 T 19-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 ALIDE2_RS03920 c662c0fee6023515c73fddc7489abb17 732 Pfam PF05140 ResB-like family 27 707 3.1E-152 T 19-04-2016 IPR007816 ResB-like domain ALIDE2_RS03920 c662c0fee6023515c73fddc7489abb17 732 PANTHER PTHR31566:SF0 16 199 6.8E-44 T 19-04-2016 ALIDE2_RS03920 c662c0fee6023515c73fddc7489abb17 732 PANTHER PTHR31566:SF0 234 448 6.8E-44 T 19-04-2016 ALIDE2_RS03920 c662c0fee6023515c73fddc7489abb17 732 PANTHER PTHR31566:SF0 596 723 6.8E-44 T 19-04-2016 ALIDE2_RS03920 c662c0fee6023515c73fddc7489abb17 732 PANTHER PTHR31566 16 199 6.8E-44 T 19-04-2016 ALIDE2_RS03920 c662c0fee6023515c73fddc7489abb17 732 PANTHER PTHR31566 234 448 6.8E-44 T 19-04-2016 ALIDE2_RS03920 c662c0fee6023515c73fddc7489abb17 732 PANTHER PTHR31566 596 723 6.8E-44 T 19-04-2016 ALIDE2_RS04680 8f35b3169c6120a1d5b71af32d9b6cc2 288 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS04680 8f35b3169c6120a1d5b71af32d9b6cc2 288 PANTHER PTHR24220 28 285 4.8E-126 T 19-04-2016 ALIDE2_RS04680 8f35b3169c6120a1d5b71af32d9b6cc2 288 Gene3D G3DSA:3.40.50.300 25 278 2.8E-80 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04680 8f35b3169c6120a1d5b71af32d9b6cc2 288 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 256 285 5.1E-7 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS04680 8f35b3169c6120a1d5b71af32d9b6cc2 288 PANTHER PTHR24220:SF493 28 285 4.8E-126 T 19-04-2016 ALIDE2_RS04680 8f35b3169c6120a1d5b71af32d9b6cc2 288 SUPERFAMILY SSF52540 26 276 3.48E-72 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04680 8f35b3169c6120a1d5b71af32d9b6cc2 288 SMART SM00382 62 269 1.5E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS04680 8f35b3169c6120a1d5b71af32d9b6cc2 288 Pfam PF00005 ABC transporter 53 204 1.0E-30 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 2 449 5.5E-207 T 19-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 SUPERFAMILY SSF55424 335 449 4.3E-35 T 19-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 SUPERFAMILY SSF51905 1 364 1.44E-59 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 317 1.1E-67 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 2.4E-68 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 2.4E-68 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 2.4E-68 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 2.4E-68 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 2.4E-68 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 2.4E-68 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 2.4E-68 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 2.4E-68 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.4E-68 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 Gene3D G3DSA:3.50.50.60 2 146 5.8E-45 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PIRSF PIRSF000350 1 446 7.4E-85 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 2.6E-30 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.6E-30 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 2.6E-30 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 2.6E-30 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 2.6E-30 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PANTHER PTHR22912:SF106 1 449 5.5E-245 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 Gene3D G3DSA:3.30.390.30 337 449 3.7E-43 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 19-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 Gene3D G3DSA:3.50.50.60 249 330 1.7E-24 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 448 4.6E-34 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 PANTHER PTHR22912 1 449 5.5E-245 T 19-04-2016 ALIDE2_RS11070 0d9336127450cc94b98d0f56edc3c102 449 Gene3D G3DSA:3.50.50.60 147 248 1.4E-31 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15140 72aa4f083a590f0758340100b7222d20 305 PRINTS PR00721 Stomatin signature 151 169 1.7E-31 T 19-04-2016 IPR001972 Stomatin family GO:0016020 ALIDE2_RS15140 72aa4f083a590f0758340100b7222d20 305 PRINTS PR00721 Stomatin signature 24 46 1.7E-31 T 19-04-2016 IPR001972 Stomatin family GO:0016020 ALIDE2_RS15140 72aa4f083a590f0758340100b7222d20 305 PRINTS PR00721 Stomatin signature 72 93 1.7E-31 T 19-04-2016 IPR001972 Stomatin family GO:0016020 ALIDE2_RS15140 72aa4f083a590f0758340100b7222d20 305 PRINTS PR00721 Stomatin signature 127 150 1.7E-31 T 19-04-2016 IPR001972 Stomatin family GO:0016020 ALIDE2_RS15140 72aa4f083a590f0758340100b7222d20 305 PRINTS PR00721 Stomatin signature 170 191 1.7E-31 T 19-04-2016 IPR001972 Stomatin family GO:0016020 ALIDE2_RS15140 72aa4f083a590f0758340100b7222d20 305 PRINTS PR00721 Stomatin signature 107 124 1.7E-31 T 19-04-2016 IPR001972 Stomatin family GO:0016020 ALIDE2_RS15140 72aa4f083a590f0758340100b7222d20 305 Pfam PF01145 SPFH domain / Band 7 family 21 190 1.4E-31 T 19-04-2016 IPR001107 Band 7 domain ALIDE2_RS15140 72aa4f083a590f0758340100b7222d20 305 SUPERFAMILY SSF117892 48 182 1.23E-40 T 19-04-2016 IPR001107 Band 7 domain ALIDE2_RS15140 72aa4f083a590f0758340100b7222d20 305 PANTHER PTHR10264 3 299 5.2E-126 T 19-04-2016 IPR001972 Stomatin family GO:0016020 ALIDE2_RS15140 72aa4f083a590f0758340100b7222d20 305 PANTHER PTHR10264:SF27 3 299 5.2E-126 T 19-04-2016 ALIDE2_RS15140 72aa4f083a590f0758340100b7222d20 305 Pfam PF16200 C-terminal region of band_7 240 301 6.0E-19 T 19-04-2016 IPR032435 Band 7, C-terminal extension ALIDE2_RS15140 72aa4f083a590f0758340100b7222d20 305 SMART SM00244 17 175 1.6E-57 T 19-04-2016 IPR001107 Band 7 domain ALIDE2_RS05260 3b59095572675bfaa7dadbe1679d9d94 206 PANTHER PTHR11938 141 177 2.7E-94 T 19-04-2016 ALIDE2_RS05260 3b59095572675bfaa7dadbe1679d9d94 206 PANTHER PTHR11938 1 123 2.7E-94 T 19-04-2016 ALIDE2_RS05260 3b59095572675bfaa7dadbe1679d9d94 206 Pfam PF13247 4Fe-4S dicluster domain 52 164 7.0E-12 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS05260 3b59095572675bfaa7dadbe1679d9d94 206 SUPERFAMILY SSF54862 1 180 3.45E-50 T 19-04-2016 ALIDE2_RS05260 3b59095572675bfaa7dadbe1679d9d94 206 PRINTS PR00354 7Fe ferredoxin signature 82 99 4.1E-5 T 19-04-2016 IPR000813 7Fe ferredoxin GO:0009055 ALIDE2_RS05260 3b59095572675bfaa7dadbe1679d9d94 206 PRINTS PR00354 7Fe ferredoxin signature 65 75 4.1E-5 T 19-04-2016 IPR000813 7Fe ferredoxin GO:0009055 ALIDE2_RS05260 3b59095572675bfaa7dadbe1679d9d94 206 PRINTS PR00354 7Fe ferredoxin signature 55 65 4.1E-5 T 19-04-2016 IPR000813 7Fe ferredoxin GO:0009055 ALIDE2_RS05260 3b59095572675bfaa7dadbe1679d9d94 206 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS05260 3b59095572675bfaa7dadbe1679d9d94 206 Gene3D G3DSA:3.30.70.20 63 118 7.2E-22 T 19-04-2016 ALIDE2_RS05260 3b59095572675bfaa7dadbe1679d9d94 206 Gene3D G3DSA:3.30.70.20 119 175 2.0E-20 T 19-04-2016 ALIDE2_RS05260 3b59095572675bfaa7dadbe1679d9d94 206 Gene3D G3DSA:3.30.70.20 3 62 2.0E-20 T 19-04-2016 ALIDE2_RS05260 3b59095572675bfaa7dadbe1679d9d94 206 PANTHER PTHR11938:SF96 141 177 2.7E-94 T 19-04-2016 ALIDE2_RS05260 3b59095572675bfaa7dadbe1679d9d94 206 PANTHER PTHR11938:SF96 1 123 2.7E-94 T 19-04-2016 ALIDE2_RS07355 bafb7d757923d3a08db938b7693857f9 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 220 2.8E-19 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS07355 bafb7d757923d3a08db938b7693857f9 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 380 1.3E-34 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS07355 bafb7d757923d3a08db938b7693857f9 388 PANTHER PTHR10909 1 388 7.7E-192 T 19-04-2016 ALIDE2_RS07355 bafb7d757923d3a08db938b7693857f9 388 Gene3D G3DSA:2.40.110.10 121 221 5.1E-27 T 19-04-2016 ALIDE2_RS07355 bafb7d757923d3a08db938b7693857f9 388 PANTHER PTHR10909:SF241 1 388 7.7E-192 T 19-04-2016 ALIDE2_RS07355 bafb7d757923d3a08db938b7693857f9 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 1.3E-24 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS07355 bafb7d757923d3a08db938b7693857f9 388 Gene3D G3DSA:1.10.540.10 1 118 4.1E-32 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS07355 bafb7d757923d3a08db938b7693857f9 388 SUPERFAMILY SSF47203 231 386 2.74E-45 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS07355 bafb7d757923d3a08db938b7693857f9 388 SUPERFAMILY SSF56645 1 232 2.23E-58 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS07355 bafb7d757923d3a08db938b7693857f9 388 Gene3D G3DSA:1.20.140.10 222 387 1.5E-53 T 19-04-2016 ALIDE2_RS06800 291a77100d25db154a6d66fd31d9e45d 480 SUPERFAMILY SSF52540 79 364 1.05E-74 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06800 291a77100d25db154a6d66fd31d9e45d 480 SMART SM00487 22 227 5.0E-62 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS06800 291a77100d25db154a6d66fd31d9e45d 480 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 19-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ALIDE2_RS06800 291a77100d25db154a6d66fd31d9e45d 480 PANTHER PTHR24031 8 415 2.3E-173 T 19-04-2016 ALIDE2_RS06800 291a77100d25db154a6d66fd31d9e45d 480 Gene3D G3DSA:3.40.50.300 217 382 2.2E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06800 291a77100d25db154a6d66fd31d9e45d 480 SMART SM00490 263 344 6.9E-33 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS06800 291a77100d25db154a6d66fd31d9e45d 480 PANTHER PTHR24031:SF0 8 415 2.3E-173 T 19-04-2016 ALIDE2_RS06800 291a77100d25db154a6d66fd31d9e45d 480 Gene3D G3DSA:3.40.50.300 6 216 1.4E-80 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06800 291a77100d25db154a6d66fd31d9e45d 480 Pfam PF00271 Helicase conserved C-terminal domain 237 344 5.4E-27 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS06800 291a77100d25db154a6d66fd31d9e45d 480 Pfam PF00270 DEAD/DEAH box helicase 27 201 3.2E-51 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ALIDE2_RS19450 a6dfab50488d5fa16090586ee1740c2a 219 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 124 203 2.8E-5 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS19450 a6dfab50488d5fa16090586ee1740c2a 219 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 37 104 3.7E-5 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS19450 a6dfab50488d5fa16090586ee1740c2a 219 Gene3D G3DSA:1.10.760.10 27 107 4.2E-22 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS19450 a6dfab50488d5fa16090586ee1740c2a 219 SUPERFAMILY SSF46626 133 209 1.41E-16 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS19450 a6dfab50488d5fa16090586ee1740c2a 219 PANTHER PTHR33751 29 213 1.5E-30 T 19-04-2016 ALIDE2_RS19450 a6dfab50488d5fa16090586ee1740c2a 219 PIRSF PIRSF000005 1 208 8.4E-37 T 19-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 ALIDE2_RS19450 a6dfab50488d5fa16090586ee1740c2a 219 SUPERFAMILY SSF46626 7 107 5.27E-18 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS19450 a6dfab50488d5fa16090586ee1740c2a 219 PANTHER PTHR33751:SF3 29 213 1.5E-30 T 19-04-2016 ALIDE2_RS19450 a6dfab50488d5fa16090586ee1740c2a 219 Gene3D G3DSA:1.10.760.10 117 207 7.4E-21 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS02675 262c1c1e07cf7ac2b0c1dad55f26b634 323 PIRSF PIRSF017082 2 322 6.3E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS02675 262c1c1e07cf7ac2b0c1dad55f26b634 323 SUPERFAMILY SSF53850 111 283 8.25E-11 T 19-04-2016 ALIDE2_RS02675 262c1c1e07cf7ac2b0c1dad55f26b634 323 PANTHER PTHR30349 3 280 3.5E-71 T 19-04-2016 ALIDE2_RS02675 262c1c1e07cf7ac2b0c1dad55f26b634 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 318 5.9E-77 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS02675 262c1c1e07cf7ac2b0c1dad55f26b634 323 PANTHER PTHR30349:SF16 3 280 3.5E-71 T 19-04-2016 ALIDE2_RS10250 fa307ccf53ed1bc5f8ca3938de67188f 134 PANTHER PTHR38107:SF2 10 129 6.8E-25 T 19-04-2016 ALIDE2_RS10250 fa307ccf53ed1bc5f8ca3938de67188f 134 SUPERFAMILY SSF53955 10 130 1.23E-38 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS10250 fa307ccf53ed1bc5f8ca3938de67188f 134 PANTHER PTHR38107 10 129 6.8E-25 T 19-04-2016 ALIDE2_RS10250 fa307ccf53ed1bc5f8ca3938de67188f 134 Pfam PF00959 Phage lysozyme 19 124 1.8E-15 T 19-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 ALIDE2_RS10250 fa307ccf53ed1bc5f8ca3938de67188f 134 Gene3D G3DSA:1.10.530.40 9 133 4.4E-40 T 19-04-2016 IPR023347 Lysozyme domain GO:0003796 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 635 654 2.5E-25 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 578 588 2.5E-25 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 556 567 2.5E-25 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 278 292 2.5E-25 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 658 670 2.5E-25 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 428 442 2.5E-25 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 201 719 6.2E-80 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 PANTHER PTHR24093:SF332 15 741 6.0E-261 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 Gene3D G3DSA:2.70.150.10 173 329 1.6E-29 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 SUPERFAMILY SSF56784 485 735 4.25E-54 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 SUPERFAMILY SSF56784 426 446 4.25E-54 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 145 738 8.3E-173 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 Pfam PF00122 E1-E2 ATPase 199 419 5.5E-65 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 Gene3D G3DSA:3.40.50.1000 551 703 2.0E-51 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 Gene3D G3DSA:3.40.50.1000 399 442 2.0E-51 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 ProSitePatterns PS01047 Heavy-metal-associated domain. 19 48 - T 19-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 SUPERFAMILY SSF55008 15 81 6.81E-17 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 SUPERFAMILY SSF81653 231 328 4.45E-27 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 430 436 - T 19-04-2016 IPR018303 P-type ATPase, phosphorylation site ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 SUPERFAMILY SSF81665 189 232 7.32E-14 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 SUPERFAMILY SSF81665 329 422 7.32E-14 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 SUPERFAMILY SSF81665 684 708 7.32E-14 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 Gene3D G3DSA:3.40.1110.10 443 547 5.3E-16 T 19-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 Pfam PF00702 haloacid dehalogenase-like hydrolase 426 649 2.0E-43 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 Gene3D G3DSA:3.30.70.100 15 81 9.9E-23 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 Pfam PF00403 Heavy-metal-associated domain 19 79 6.3E-15 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 PRINTS PR00943 Copper-transporting ATPase signature 612 629 1.5E-8 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 PRINTS PR00943 Copper-transporting ATPase signature 411 426 1.5E-8 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 PRINTS PR00943 Copper-transporting ATPase signature 198 217 1.5E-8 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 PRINTS PR00943 Copper-transporting ATPase signature 351 365 1.5E-8 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 PRINTS PR00943 Copper-transporting ATPase signature 148 167 1.5E-8 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 PANTHER PTHR24093 15 741 6.0E-261 T 19-04-2016 ALIDE2_RS00225 c3dcd7bc8bba2772d858dfd370998b43 743 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 163 737 4.7E-181 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS15310 185c9710d9b7460b1fc92e8538035739 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS15310 185c9710d9b7460b1fc92e8538035739 269 PANTHER PTHR24321:SF6 3 266 5.0E-53 T 19-04-2016 ALIDE2_RS15310 185c9710d9b7460b1fc92e8538035739 269 PANTHER PTHR24321 3 266 5.0E-53 T 19-04-2016 ALIDE2_RS15310 185c9710d9b7460b1fc92e8538035739 269 Gene3D G3DSA:3.40.50.720 3 266 1.1E-79 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS15310 185c9710d9b7460b1fc92e8538035739 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 265 1.1E-61 T 19-04-2016 ALIDE2_RS15310 185c9710d9b7460b1fc92e8538035739 269 SUPERFAMILY SSF51735 6 266 4.38E-77 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS15310 185c9710d9b7460b1fc92e8538035739 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.7E-32 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15310 185c9710d9b7460b1fc92e8538035739 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.7E-32 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15310 185c9710d9b7460b1fc92e8538035739 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.7E-32 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15310 185c9710d9b7460b1fc92e8538035739 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.7E-32 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15310 185c9710d9b7460b1fc92e8538035739 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 2.7E-32 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15310 185c9710d9b7460b1fc92e8538035739 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.5E-14 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15310 185c9710d9b7460b1fc92e8538035739 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 2.5E-14 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15310 185c9710d9b7460b1fc92e8538035739 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.5E-14 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07645 70bff22a96887da843628d59b8e7724d 254 Pfam PF00005 ABC transporter 23 183 5.1E-30 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS07645 70bff22a96887da843628d59b8e7724d 254 PANTHER PTHR24220 8 113 6.8E-94 T 19-04-2016 ALIDE2_RS07645 70bff22a96887da843628d59b8e7724d 254 PANTHER PTHR24220 129 253 6.8E-94 T 19-04-2016 ALIDE2_RS07645 70bff22a96887da843628d59b8e7724d 254 SMART SM00382 31 252 2.3E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS07645 70bff22a96887da843628d59b8e7724d 254 PANTHER PTHR24220:SF358 8 113 6.8E-94 T 19-04-2016 ALIDE2_RS07645 70bff22a96887da843628d59b8e7724d 254 PANTHER PTHR24220:SF358 129 253 6.8E-94 T 19-04-2016 ALIDE2_RS07645 70bff22a96887da843628d59b8e7724d 254 Gene3D G3DSA:3.40.50.300 4 251 2.2E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07645 70bff22a96887da843628d59b8e7724d 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 253 2.9E-9 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALIDE2_RS07645 70bff22a96887da843628d59b8e7724d 254 SUPERFAMILY SSF52540 5 252 3.45E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23545 a38dc8cfaf7098417e5de0e28ed4d631 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 7.0E-14 T 19-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS23545 a38dc8cfaf7098417e5de0e28ed4d631 44 Pfam PF00468 Ribosomal protein L34 1 44 2.7E-23 T 19-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS23545 a38dc8cfaf7098417e5de0e28ed4d631 44 PANTHER PTHR14503 1 44 1.0E-18 T 19-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS23545 a38dc8cfaf7098417e5de0e28ed4d631 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.9E-24 T 19-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS23545 a38dc8cfaf7098417e5de0e28ed4d631 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.46 T 19-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS23545 a38dc8cfaf7098417e5de0e28ed4d631 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 19-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS09530 8aeb403ec0a6eaf169079b7855b4f7a8 199 Gene3D G3DSA:1.10.530.10 40 171 2.4E-10 T 19-04-2016 ALIDE2_RS09530 8aeb403ec0a6eaf169079b7855b4f7a8 199 SUPERFAMILY SSF53955 109 182 1.66E-14 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS09530 8aeb403ec0a6eaf169079b7855b4f7a8 199 SUPERFAMILY SSF53955 39 81 1.66E-14 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS09530 8aeb403ec0a6eaf169079b7855b4f7a8 199 Pfam PF01464 Transglycosylase SLT domain 42 163 2.2E-5 T 19-04-2016 IPR008258 Transglycosylase SLT domain 1 ALIDE2_RS01855 9c471720c8171392b1e516bddb3468d1 230 Gene3D G3DSA:3.90.1550.10 3 228 1.8E-66 T 19-04-2016 ALIDE2_RS01855 9c471720c8171392b1e516bddb3468d1 230 SUPERFAMILY SSF55681 2 126 2.9E-61 T 19-04-2016 ALIDE2_RS01855 9c471720c8171392b1e516bddb3468d1 230 SUPERFAMILY SSF55681 154 228 2.9E-61 T 19-04-2016 ALIDE2_RS01855 9c471720c8171392b1e516bddb3468d1 230 PANTHER PTHR10993 1 128 5.7E-64 T 19-04-2016 ALIDE2_RS01855 9c471720c8171392b1e516bddb3468d1 230 PANTHER PTHR10993 156 228 5.7E-64 T 19-04-2016 ALIDE2_RS01855 9c471720c8171392b1e516bddb3468d1 230 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 70 123 1.0E-19 T 19-04-2016 ALIDE2_RS01855 9c471720c8171392b1e516bddb3468d1 230 PIRSF PIRSF016262 1 230 3.2E-56 T 19-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 ALIDE2_RS01855 9c471720c8171392b1e516bddb3468d1 230 Hamap MF_00013 Octanoyltransferase [lipB]. 2 227 33.765 T 19-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 ALIDE2_RS01855 9c471720c8171392b1e516bddb3468d1 230 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 23 127 1.8E-33 T 19-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 ALIDE2_RS01855 9c471720c8171392b1e516bddb3468d1 230 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 66 81 - T 19-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 ALIDE2_RS01855 9c471720c8171392b1e516bddb3468d1 230 Pfam PF03099 Biotin/lipoate A/B protein ligase family 57 181 5.3E-7 T 19-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 ALIDE2_RS01175 f66933642d426a30c73ad264c0b3e13a 339 Gene3D G3DSA:1.10.760.10 42 186 6.8E-51 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS01175 f66933642d426a30c73ad264c0b3e13a 339 PANTHER PTHR30600 27 323 3.6E-120 T 19-04-2016 ALIDE2_RS01175 f66933642d426a30c73ad264c0b3e13a 339 SUPERFAMILY SSF46626 182 330 4.31E-43 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS01175 f66933642d426a30c73ad264c0b3e13a 339 PIRSF PIRSF000294 7 337 6.4E-133 T 19-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 ALIDE2_RS01175 f66933642d426a30c73ad264c0b3e13a 339 Gene3D G3DSA:1.10.760.10 187 327 1.2E-49 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS01175 f66933642d426a30c73ad264c0b3e13a 339 SUPERFAMILY SSF46626 28 183 4.47E-50 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS01175 f66933642d426a30c73ad264c0b3e13a 339 Pfam PF00034 Cytochrome c 204 313 8.1E-10 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS01175 f66933642d426a30c73ad264c0b3e13a 339 PANTHER PTHR30600:SF7 27 323 3.6E-120 T 19-04-2016 ALIDE2_RS01175 f66933642d426a30c73ad264c0b3e13a 339 Pfam PF03150 Di-haem cytochrome c peroxidase 48 195 1.4E-51 T 19-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 ALIDE2_RS11995 7a16b28df55dc169865b60fe8dca1ceb 102 Pfam PF05957 Bacterial protein of unknown function (DUF883) 11 102 1.3E-23 T 19-04-2016 IPR010279 Protein of unknown function DUF883, ElaB ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 35 435 3.6E-154 T 19-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 SUPERFAMILY SSF52964 45 172 9.15E-36 T 19-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 Gene3D G3DSA:3.40.50.10070 39 162 2.9E-45 T 19-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 Pfam PF07676 WD40-like Beta Propeller Repeat 378 405 0.13 T 19-04-2016 IPR011659 WD40-like Beta Propeller ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 Pfam PF07676 WD40-like Beta Propeller Repeat 246 280 7.8E-9 T 19-04-2016 IPR011659 WD40-like Beta Propeller ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 Pfam PF07676 WD40-like Beta Propeller Repeat 204 236 2.9E-4 T 19-04-2016 IPR011659 WD40-like Beta Propeller ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 Pfam PF07676 WD40-like Beta Propeller Repeat 333 366 2.5E-8 T 19-04-2016 IPR011659 WD40-like Beta Propeller ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 Pfam PF07676 WD40-like Beta Propeller Repeat 289 324 1.6E-13 T 19-04-2016 IPR011659 WD40-like Beta Propeller ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 Pfam PF04052 TolB amino-terminal domain 41 140 1.4E-29 T 19-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 SUPERFAMILY SSF69304 165 436 3.14E-60 T 19-04-2016 ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 PANTHER PTHR11731 5 134 2.6E-69 T 19-04-2016 ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 PANTHER PTHR11731 171 436 2.6E-69 T 19-04-2016 ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 Gene3D G3DSA:2.130.10.10 163 436 6.7E-82 T 19-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 PANTHER PTHR11731:SF123 5 134 2.6E-69 T 19-04-2016 ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 PANTHER PTHR11731:SF123 171 436 2.6E-69 T 19-04-2016 ALIDE2_RS15770 c5c1d75332d6fc230b1a66c4920631c8 440 Hamap MF_00671 Protein TolB [tolB]. 21 434 33.444 T 19-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 ALIDE2_RS21435 04a717b3d9944a9fabd10472383ac5c3 307 SUPERFAMILY SSF53474 3 144 2.61E-44 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS21435 04a717b3d9944a9fabd10472383ac5c3 307 SUPERFAMILY SSF53474 221 304 2.61E-44 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS21435 04a717b3d9944a9fabd10472383ac5c3 307 PANTHER PTHR17630 1 145 2.5E-33 T 19-04-2016 ALIDE2_RS21435 04a717b3d9944a9fabd10472383ac5c3 307 PANTHER PTHR17630 234 263 2.5E-33 T 19-04-2016 ALIDE2_RS21435 04a717b3d9944a9fabd10472383ac5c3 307 PANTHER PTHR17630:SF50 1 145 2.5E-33 T 19-04-2016 ALIDE2_RS21435 04a717b3d9944a9fabd10472383ac5c3 307 PANTHER PTHR17630:SF50 234 263 2.5E-33 T 19-04-2016 ALIDE2_RS21435 04a717b3d9944a9fabd10472383ac5c3 307 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 13 159 1.2E-13 T 19-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 ALIDE2_RS21435 04a717b3d9944a9fabd10472383ac5c3 307 Gene3D G3DSA:3.40.50.1820 3 148 1.7E-50 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS21435 04a717b3d9944a9fabd10472383ac5c3 307 Gene3D G3DSA:3.40.50.1820 188 287 1.7E-50 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 PANTHER PTHR19375 93 350 1.9E-42 T 19-04-2016 ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 PANTHER PTHR19375:SF176 93 350 1.9E-42 T 19-04-2016 ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 PANTHER PTHR19375 64 77 1.9E-42 T 19-04-2016 ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 PRINTS PR00301 70kDa heat shock protein signature 173 193 4.8E-6 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 PRINTS PR00301 70kDa heat shock protein signature 240 250 4.8E-6 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 PRINTS PR00301 70kDa heat shock protein signature 19 32 4.8E-6 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 SUPERFAMILY SSF53067 229 379 4.66E-27 T 19-04-2016 ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 SUPERFAMILY SSF53067 417 476 4.66E-27 T 19-04-2016 ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 SUPERFAMILY SSF53067 19 215 4.46E-28 T 19-04-2016 ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 Gene3D G3DSA:3.30.420.40 236 340 4.9E-16 T 19-04-2016 ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 Pfam PF00012 Hsp70 protein 141 357 4.9E-15 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 23 30 - T 19-04-2016 IPR018181 Heat shock protein 70, conserved site ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 234 247 - T 19-04-2016 IPR018181 Heat shock protein 70, conserved site ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 Gene3D G3DSA:3.30.420.40 18 235 1.2E-30 T 19-04-2016 ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 PANTHER PTHR19375:SF176 64 77 1.9E-42 T 19-04-2016 ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 PANTHER PTHR19375:SF176 18 48 1.9E-42 T 19-04-2016 ALIDE2_RS02720 7e66e2664d5c5775fed13201ec05b22b 630 PANTHER PTHR19375 18 48 1.9E-42 T 19-04-2016 ALIDE2_RS00700 4af329f3c773e148d04a596f4752db26 385 Gene3D G3DSA:1.10.540.10 11 128 2.5E-36 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00700 4af329f3c773e148d04a596f4752db26 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 226 1.8E-25 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS00700 4af329f3c773e148d04a596f4752db26 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 385 8.8E-41 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00700 4af329f3c773e148d04a596f4752db26 385 PANTHER PTHR10909 11 385 5.2E-155 T 19-04-2016 ALIDE2_RS00700 4af329f3c773e148d04a596f4752db26 385 Gene3D G3DSA:1.20.140.10 227 384 1.3E-54 T 19-04-2016 ALIDE2_RS00700 4af329f3c773e148d04a596f4752db26 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS00700 4af329f3c773e148d04a596f4752db26 385 PANTHER PTHR10909:SF190 11 385 5.2E-155 T 19-04-2016 ALIDE2_RS00700 4af329f3c773e148d04a596f4752db26 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 133 145 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS00700 4af329f3c773e148d04a596f4752db26 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 17 127 2.6E-34 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00700 4af329f3c773e148d04a596f4752db26 385 SUPERFAMILY SSF56645 13 248 8.25E-80 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS00700 4af329f3c773e148d04a596f4752db26 385 SUPERFAMILY SSF47203 238 383 2.42E-41 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00700 4af329f3c773e148d04a596f4752db26 385 Gene3D G3DSA:2.40.110.10 131 226 4.7E-36 T 19-04-2016 ALIDE2_RS01405 0b901741ea8b8d3ba36adec46c0c6cb7 345 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 274 336 2.0E-29 T 19-04-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 ALIDE2_RS01405 0b901741ea8b8d3ba36adec46c0c6cb7 345 Gene3D G3DSA:1.10.8.60 277 340 1.7E-32 T 19-04-2016 ALIDE2_RS01405 0b901741ea8b8d3ba36adec46c0c6cb7 345 PANTHER PTHR10277:SF3 1 265 3.0E-99 T 19-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 ALIDE2_RS01405 0b901741ea8b8d3ba36adec46c0c6cb7 345 PANTHER PTHR10277 1 265 3.0E-99 T 19-04-2016 ALIDE2_RS01405 0b901741ea8b8d3ba36adec46c0c6cb7 345 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 344 211.844 T 19-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 ALIDE2_RS01405 0b901741ea8b8d3ba36adec46c0c6cb7 345 SUPERFAMILY SSF89000 290 339 1.8E-15 T 19-04-2016 ALIDE2_RS01405 0b901741ea8b8d3ba36adec46c0c6cb7 345 Pfam PF00682 HMGL-like 8 264 6.3E-56 T 19-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 ALIDE2_RS01405 0b901741ea8b8d3ba36adec46c0c6cb7 345 Pfam PF07836 DmpG-like communication domain 276 336 2.2E-29 T 19-04-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 ALIDE2_RS01405 0b901741ea8b8d3ba36adec46c0c6cb7 345 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 6 339 7.5E-167 T 19-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 ALIDE2_RS01405 0b901741ea8b8d3ba36adec46c0c6cb7 345 Gene3D G3DSA:3.20.20.70 6 264 7.0E-54 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS01405 0b901741ea8b8d3ba36adec46c0c6cb7 345 SUPERFAMILY SSF51569 4 276 9.52E-66 T 19-04-2016 ALIDE2_RS06930 cc2e15bd53769932f39869c617ea88fc 470 PANTHER PTHR30203:SF7 5 467 4.8E-112 T 19-04-2016 ALIDE2_RS06930 cc2e15bd53769932f39869c617ea88fc 470 Gene3D G3DSA:1.20.1600.10 144 314 1.0E-96 T 19-04-2016 ALIDE2_RS06930 cc2e15bd53769932f39869c617ea88fc 470 Gene3D G3DSA:1.20.1600.10 57 96 1.0E-96 T 19-04-2016 ALIDE2_RS06930 cc2e15bd53769932f39869c617ea88fc 470 Gene3D G3DSA:1.20.1600.10 352 466 1.0E-96 T 19-04-2016 ALIDE2_RS06930 cc2e15bd53769932f39869c617ea88fc 470 Gene3D G3DSA:2.20.200.10 106 143 1.3E-15 T 19-04-2016 ALIDE2_RS06930 cc2e15bd53769932f39869c617ea88fc 470 Gene3D G3DSA:2.20.200.10 315 349 1.3E-15 T 19-04-2016 ALIDE2_RS06930 cc2e15bd53769932f39869c617ea88fc 470 Pfam PF02321 Outer membrane efflux protein 278 459 1.3E-28 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS06930 cc2e15bd53769932f39869c617ea88fc 470 Pfam PF02321 Outer membrane efflux protein 70 256 1.6E-29 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS06930 cc2e15bd53769932f39869c617ea88fc 470 PANTHER PTHR30203 5 467 4.8E-112 T 19-04-2016 ALIDE2_RS06930 cc2e15bd53769932f39869c617ea88fc 470 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 460 8.5E-121 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 ALIDE2_RS06930 cc2e15bd53769932f39869c617ea88fc 470 SUPERFAMILY SSF56954 61 468 4.97E-110 T 19-04-2016 ALIDE2_RS06930 cc2e15bd53769932f39869c617ea88fc 470 SUPERFAMILY SSF56954 1 31 4.97E-110 T 19-04-2016 ALIDE2_RS12995 083c8ae999896fbfa1d95f56ff34a5ac 181 PANTHER PTHR26402 124 179 2.6E-13 T 19-04-2016 ALIDE2_RS12995 083c8ae999896fbfa1d95f56ff34a5ac 181 Gene3D G3DSA:1.10.10.10 118 179 5.0E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12995 083c8ae999896fbfa1d95f56ff34a5ac 181 SUPERFAMILY SSF55785 5 114 1.71E-14 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS12995 083c8ae999896fbfa1d95f56ff34a5ac 181 SMART SM00421 121 178 7.4E-18 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS12995 083c8ae999896fbfa1d95f56ff34a5ac 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 166 5.4E-10 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS12995 083c8ae999896fbfa1d95f56ff34a5ac 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 154 5.4E-10 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS12995 083c8ae999896fbfa1d95f56ff34a5ac 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 124 138 5.4E-10 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS12995 083c8ae999896fbfa1d95f56ff34a5ac 181 PANTHER PTHR26402:SF599 124 179 2.6E-13 T 19-04-2016 ALIDE2_RS12995 083c8ae999896fbfa1d95f56ff34a5ac 181 SUPERFAMILY SSF46894 111 178 1.33E-17 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS12995 083c8ae999896fbfa1d95f56ff34a5ac 181 Pfam PF00196 Bacterial regulatory proteins, luxR family 123 176 6.3E-15 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS12995 083c8ae999896fbfa1d95f56ff34a5ac 181 Gene3D G3DSA:3.30.450.20 5 114 3.9E-14 T 19-04-2016 ALIDE2_RS12995 083c8ae999896fbfa1d95f56ff34a5ac 181 Pfam PF13426 PAS domain 14 115 8.6E-11 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS12995 083c8ae999896fbfa1d95f56ff34a5ac 181 ProSitePatterns PS00622 LuxR-type HTH domain signature. 138 165 - T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS12995 083c8ae999896fbfa1d95f56ff34a5ac 181 SMART SM00091 4 70 2.7E-5 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS12995 083c8ae999896fbfa1d95f56ff34a5ac 181 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 115 1.2E-13 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS05360 f1fb407ba3e60163c5dc22ab9c6f05d5 442 Pfam PF00571 CBS domain 275 332 3.0E-7 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS05360 f1fb407ba3e60163c5dc22ab9c6f05d5 442 Pfam PF01595 Domain of unknown function DUF21 5 196 8.9E-46 T 19-04-2016 IPR002550 Domain of unknown function DUF21 ALIDE2_RS05360 f1fb407ba3e60163c5dc22ab9c6f05d5 442 SMART SM01091 346 428 1.1E-26 T 19-04-2016 IPR005170 Transporter-associated domain ALIDE2_RS05360 f1fb407ba3e60163c5dc22ab9c6f05d5 442 SMART SM00116 284 332 0.0089 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS05360 f1fb407ba3e60163c5dc22ab9c6f05d5 442 SUPERFAMILY SSF56176 344 430 3.27E-21 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS05360 f1fb407ba3e60163c5dc22ab9c6f05d5 442 Gene3D G3DSA:3.30.465.10 325 427 8.2E-28 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ALIDE2_RS05360 f1fb407ba3e60163c5dc22ab9c6f05d5 442 SUPERFAMILY SSF54631 198 335 3.41E-27 T 19-04-2016 ALIDE2_RS05360 f1fb407ba3e60163c5dc22ab9c6f05d5 442 PANTHER PTHR22777 1 430 1.0E-175 T 19-04-2016 ALIDE2_RS05360 f1fb407ba3e60163c5dc22ab9c6f05d5 442 PANTHER PTHR22777:SF8 1 430 1.0E-175 T 19-04-2016 ALIDE2_RS05360 f1fb407ba3e60163c5dc22ab9c6f05d5 442 Pfam PF03471 Transporter associated domain 347 427 4.3E-21 T 19-04-2016 IPR005170 Transporter-associated domain ALIDE2_RS05360 f1fb407ba3e60163c5dc22ab9c6f05d5 442 Gene3D G3DSA:3.10.580.10 197 324 5.4E-16 T 19-04-2016 ALIDE2_RS19160 f9e9f5b58810270c6fd5fb5f28eb1de2 434 SUPERFAMILY SSF103473 13 421 6.54E-68 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS19160 f9e9f5b58810270c6fd5fb5f28eb1de2 434 Gene3D G3DSA:1.20.1250.20 17 206 5.2E-35 T 19-04-2016 ALIDE2_RS19160 f9e9f5b58810270c6fd5fb5f28eb1de2 434 Gene3D G3DSA:1.20.1250.20 232 417 4.5E-17 T 19-04-2016 ALIDE2_RS19160 f9e9f5b58810270c6fd5fb5f28eb1de2 434 Pfam PF07690 Major Facilitator Superfamily 32 381 8.7E-43 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS19160 f9e9f5b58810270c6fd5fb5f28eb1de2 434 PANTHER PTHR23505 5 417 7.8E-47 T 19-04-2016 ALIDE2_RS17380 68e03f3115e14a9d74d40e42a0d7737e 305 SUPERFAMILY SSF53850 94 302 2.09E-35 T 19-04-2016 ALIDE2_RS17380 68e03f3115e14a9d74d40e42a0d7737e 305 Pfam PF03466 LysR substrate binding domain 93 297 2.6E-33 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS17380 68e03f3115e14a9d74d40e42a0d7737e 305 PANTHER PTHR30419 2 296 2.2E-82 T 19-04-2016 ALIDE2_RS17380 68e03f3115e14a9d74d40e42a0d7737e 305 Gene3D G3DSA:1.10.10.10 9 91 6.0E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17380 68e03f3115e14a9d74d40e42a0d7737e 305 PANTHER PTHR30419:SF2 2 296 2.2E-82 T 19-04-2016 ALIDE2_RS17380 68e03f3115e14a9d74d40e42a0d7737e 305 Gene3D G3DSA:3.40.190.10 180 267 6.5E-15 T 19-04-2016 ALIDE2_RS17380 68e03f3115e14a9d74d40e42a0d7737e 305 Gene3D G3DSA:3.40.190.10 98 179 2.6E-19 T 19-04-2016 ALIDE2_RS17380 68e03f3115e14a9d74d40e42a0d7737e 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 1.6E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS17380 68e03f3115e14a9d74d40e42a0d7737e 305 SUPERFAMILY SSF46785 5 116 5.12E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18920 2492ac4080dfbdff1a9e0061015f654d 692 SUPERFAMILY SSF50249 206 580 8.0E-71 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS18920 2492ac4080dfbdff1a9e0061015f654d 692 SMART SM00955 235 531 6.9E-64 T 19-04-2016 ALIDE2_RS18920 2492ac4080dfbdff1a9e0061015f654d 692 Pfam PF00773 RNB domain 493 527 2.9E-8 T 19-04-2016 ALIDE2_RS18920 2492ac4080dfbdff1a9e0061015f654d 692 Pfam PF00773 RNB domain 243 483 6.1E-33 T 19-04-2016 ALIDE2_RS18920 2492ac4080dfbdff1a9e0061015f654d 692 PANTHER PTHR23355 242 592 4.3E-40 T 19-04-2016 ALIDE2_RS18920 2492ac4080dfbdff1a9e0061015f654d 692 PANTHER PTHR23355:SF5 242 592 4.3E-40 T 19-04-2016 ALIDE2_RS22845 a88f944a5dd936c80a3d604c13913c9d 310 Gene3D G3DSA:3.30.360.10 130 291 8.5E-36 T 19-04-2016 ALIDE2_RS22845 a88f944a5dd936c80a3d604c13913c9d 310 PANTHER PTHR32338 2 310 1.3E-113 T 19-04-2016 ALIDE2_RS22845 a88f944a5dd936c80a3d604c13913c9d 310 SUPERFAMILY SSF51735 1 142 9.94E-30 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22845 a88f944a5dd936c80a3d604c13913c9d 310 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 2 310 3.5E-119 T 19-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS22845 a88f944a5dd936c80a3d604c13913c9d 310 PANTHER PTHR32338:SF9 2 310 1.3E-113 T 19-04-2016 ALIDE2_RS22845 a88f944a5dd936c80a3d604c13913c9d 310 SUPERFAMILY SSF55347 121 291 1.34E-33 T 19-04-2016 ALIDE2_RS22845 a88f944a5dd936c80a3d604c13913c9d 310 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 310 51.345 T 19-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS22845 a88f944a5dd936c80a3d604c13913c9d 310 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 43 107 2.9E-5 T 19-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ALIDE2_RS22845 a88f944a5dd936c80a3d604c13913c9d 310 SMART SM00859 3 110 3.7E-16 T 19-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ALIDE2_RS22845 a88f944a5dd936c80a3d604c13913c9d 310 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 116 132 - T 19-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS22845 a88f944a5dd936c80a3d604c13913c9d 310 Gene3D G3DSA:3.40.50.720 43 129 7.8E-15 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS17910 62fe38f096b4ce6c1caeae067cd79e41 179 Pfam PF05233 PHB accumulation regulatory domain 80 118 3.6E-17 T 19-04-2016 IPR007897 PHB accumulation regulatory ALIDE2_RS17910 62fe38f096b4ce6c1caeae067cd79e41 179 Pfam PF05233 PHB accumulation regulatory domain 125 164 1.2E-15 T 19-04-2016 IPR007897 PHB accumulation regulatory ALIDE2_RS17910 62fe38f096b4ce6c1caeae067cd79e41 179 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 15 121 1.6E-44 T 19-04-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR ALIDE2_RS17910 62fe38f096b4ce6c1caeae067cd79e41 179 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 16 75 4.4E-30 T 19-04-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal ALIDE2_RS21930 c741b608cb592da5fce4a46e90120a57 746 Pfam PF02203 Tar ligand binding domain homologue 27 204 1.1E-22 T 19-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS21930 c741b608cb592da5fce4a46e90120a57 746 Gene3D G3DSA:3.20.20.450 481 729 6.5E-93 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS21930 c741b608cb592da5fce4a46e90120a57 746 Pfam PF00563 EAL domain 484 718 2.3E-69 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS21930 c741b608cb592da5fce4a46e90120a57 746 Pfam PF00990 Diguanylate cyclase, GGDEF domain 302 462 2.0E-44 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS21930 c741b608cb592da5fce4a46e90120a57 746 Pfam PF00672 HAMP domain 225 293 1.4E-11 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS21930 c741b608cb592da5fce4a46e90120a57 746 SMART SM00304 244 296 1.4E-10 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS21930 c741b608cb592da5fce4a46e90120a57 746 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 299 466 3.7E-38 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS21930 c741b608cb592da5fce4a46e90120a57 746 SMART SM00052 477 723 1.7E-103 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS21930 c741b608cb592da5fce4a46e90120a57 746 SMART SM00267 291 467 1.4E-56 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS21930 c741b608cb592da5fce4a46e90120a57 746 SUPERFAMILY SSF158472 244 293 8.5E-8 T 19-04-2016 ALIDE2_RS21930 c741b608cb592da5fce4a46e90120a57 746 PANTHER PTHR33121 427 728 1.9E-72 T 19-04-2016 ALIDE2_RS21930 c741b608cb592da5fce4a46e90120a57 746 Gene3D G3DSA:3.30.70.270 303 474 2.8E-52 T 19-04-2016 ALIDE2_RS21930 c741b608cb592da5fce4a46e90120a57 746 SUPERFAMILY SSF55073 307 469 1.8E-42 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS21930 c741b608cb592da5fce4a46e90120a57 746 SUPERFAMILY SSF141868 483 730 5.23E-84 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS21930 c741b608cb592da5fce4a46e90120a57 746 PANTHER PTHR33121:SF13 427 728 1.9E-72 T 19-04-2016 ALIDE2_RS09550 ea6a1f7c310358a906ed9216b84d2714 115 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 24 98 5.5E-27 T 19-04-2016 IPR019110 Uncharacterised protein family, RAQPRD ALIDE2_RS09550 ea6a1f7c310358a906ed9216b84d2714 115 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 17 100 8.1E-32 T 19-04-2016 IPR019110 Uncharacterised protein family, RAQPRD ALIDE2_RS20825 97cf4568720ba57ef0a010c85da59d98 191 PANTHER PTHR35091:SF1 8 150 1.5E-29 T 19-04-2016 ALIDE2_RS20825 97cf4568720ba57ef0a010c85da59d98 191 PANTHER PTHR35091 8 150 1.5E-29 T 19-04-2016 ALIDE2_RS20825 97cf4568720ba57ef0a010c85da59d98 191 Pfam PF03748 Flagellar basal body-associated protein FliL 63 191 8.2E-28 T 19-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 ALIDE2_RS17770 06eb6f87420f469c0e16699179eb2213 333 PANTHER PTHR30482:SF8 13 331 4.0E-110 T 19-04-2016 ALIDE2_RS17770 06eb6f87420f469c0e16699179eb2213 333 PANTHER PTHR30482 13 331 4.0E-110 T 19-04-2016 ALIDE2_RS17770 06eb6f87420f469c0e16699179eb2213 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 304 2.1E-33 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS02335 b2d69de4270b460b90be1c60cd3896eb 233 SUPERFAMILY SSF89155 10 172 1.7E-32 T 19-04-2016 IPR020945 DMSO/Nitrate reductase chaperone ALIDE2_RS02335 b2d69de4270b460b90be1c60cd3896eb 233 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 18 169 3.3E-36 T 19-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 ALIDE2_RS02335 b2d69de4270b460b90be1c60cd3896eb 233 PANTHER PTHR30598:SF1 4 225 3.3E-49 T 19-04-2016 ALIDE2_RS02335 b2d69de4270b460b90be1c60cd3896eb 233 PANTHER PTHR30598 4 225 3.3E-49 T 19-04-2016 ALIDE2_RS02335 b2d69de4270b460b90be1c60cd3896eb 233 Pfam PF02613 Nitrate reductase delta subunit 51 166 4.4E-11 T 19-04-2016 IPR020945 DMSO/Nitrate reductase chaperone ALIDE2_RS02335 b2d69de4270b460b90be1c60cd3896eb 233 Gene3D G3DSA:1.10.3480.10 4 144 1.1E-7 T 19-04-2016 IPR020945 DMSO/Nitrate reductase chaperone ALIDE2_RS01460 8ed9fafd69e712e45f34106a3a024a87 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 325 5.7E-93 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01460 8ed9fafd69e712e45f34106a3a024a87 329 PIRSF PIRSF017082 1 329 2.3E-88 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01460 8ed9fafd69e712e45f34106a3a024a87 329 SUPERFAMILY SSF53850 116 292 7.6E-12 T 19-04-2016 ALIDE2_RS01460 8ed9fafd69e712e45f34106a3a024a87 329 PANTHER PTHR30349:SF16 1 329 8.3E-94 T 19-04-2016 ALIDE2_RS01460 8ed9fafd69e712e45f34106a3a024a87 329 PANTHER PTHR30349 1 329 8.3E-94 T 19-04-2016 ALIDE2_RS10990 6f6e740150f166ca382f8423f24822e9 431 Pfam PF00285 Citrate synthase, C-terminal domain 52 419 9.1E-126 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10990 6f6e740150f166ca382f8423f24822e9 431 PRINTS PR00143 Citrate synthase signature 387 401 7.0E-54 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10990 6f6e740150f166ca382f8423f24822e9 431 PRINTS PR00143 Citrate synthase signature 367 383 7.0E-54 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10990 6f6e740150f166ca382f8423f24822e9 431 PRINTS PR00143 Citrate synthase signature 245 273 7.0E-54 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10990 6f6e740150f166ca382f8423f24822e9 431 PRINTS PR00143 Citrate synthase signature 169 182 7.0E-54 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10990 6f6e740150f166ca382f8423f24822e9 431 PRINTS PR00143 Citrate synthase signature 303 323 7.0E-54 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10990 6f6e740150f166ca382f8423f24822e9 431 PRINTS PR00143 Citrate synthase signature 223 238 7.0E-54 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10990 6f6e740150f166ca382f8423f24822e9 431 SUPERFAMILY SSF48256 9 429 1.18E-157 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10990 6f6e740150f166ca382f8423f24822e9 431 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 18 430 1.8E-231 T 19-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 ALIDE2_RS10990 6f6e740150f166ca382f8423f24822e9 431 PANTHER PTHR11739:SF13 8 429 2.1E-190 T 19-04-2016 ALIDE2_RS10990 6f6e740150f166ca382f8423f24822e9 431 PIRSF PIRSF001369 41 431 4.5E-154 T 19-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 ALIDE2_RS10990 6f6e740150f166ca382f8423f24822e9 431 Gene3D G3DSA:1.10.230.10 285 380 3.4E-37 T 19-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain ALIDE2_RS10990 6f6e740150f166ca382f8423f24822e9 431 PANTHER PTHR11739 8 429 2.1E-190 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10990 6f6e740150f166ca382f8423f24822e9 431 ProSitePatterns PS00480 Citrate synthase signature. 310 322 - T 19-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 ALIDE2_RS10990 6f6e740150f166ca382f8423f24822e9 431 Gene3D G3DSA:1.10.580.10 56 284 1.1E-93 T 19-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 ALIDE2_RS01870 41e5a8a1fc6618964b5cb27958d6b10b 287 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 32 282 1.0E-39 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 ALIDE2_RS01870 41e5a8a1fc6618964b5cb27958d6b10b 287 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 287 14.187 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 ALIDE2_RS01870 41e5a8a1fc6618964b5cb27958d6b10b 287 Pfam PF00119 ATP synthase A chain 41 280 2.0E-53 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 ALIDE2_RS01870 41e5a8a1fc6618964b5cb27958d6b10b 287 PANTHER PTHR11410 136 287 9.5E-69 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 ALIDE2_RS01870 41e5a8a1fc6618964b5cb27958d6b10b 287 PANTHER PTHR11410 35 118 9.5E-69 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 ALIDE2_RS01870 41e5a8a1fc6618964b5cb27958d6b10b 287 ProSitePatterns PS00449 ATP synthase a subunit signature. 211 220 - T 19-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site ALIDE2_RS01870 41e5a8a1fc6618964b5cb27958d6b10b 287 Gene3D G3DSA:1.20.120.220 94 287 1.5E-46 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 ALIDE2_RS01870 41e5a8a1fc6618964b5cb27958d6b10b 287 PANTHER PTHR11410:SF7 136 287 9.5E-69 T 19-04-2016 ALIDE2_RS01870 41e5a8a1fc6618964b5cb27958d6b10b 287 PANTHER PTHR11410:SF7 35 118 9.5E-69 T 19-04-2016 ALIDE2_RS01870 41e5a8a1fc6618964b5cb27958d6b10b 287 SUPERFAMILY SSF81336 94 280 3.53E-36 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 ALIDE2_RS02730 ec5acf6fb331457532f423b16f570c43 357 PANTHER PTHR13779:SF25 15 349 3.5E-180 T 19-04-2016 ALIDE2_RS02730 ec5acf6fb331457532f423b16f570c43 357 SUPERFAMILY SSF52540 38 268 2.21E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02730 ec5acf6fb331457532f423b16f570c43 357 SMART SM00382 69 196 3.9E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS02730 ec5acf6fb331457532f423b16f570c43 357 Gene3D G3DSA:3.40.50.300 261 281 0.001 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02730 ec5acf6fb331457532f423b16f570c43 357 Gene3D G3DSA:3.40.50.300 38 194 1.4E-33 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02730 ec5acf6fb331457532f423b16f570c43 357 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 42 344 2.7E-144 T 19-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 ALIDE2_RS02730 ec5acf6fb331457532f423b16f570c43 357 PANTHER PTHR13779 15 349 3.5E-180 T 19-04-2016 ALIDE2_RS02730 ec5acf6fb331457532f423b16f570c43 357 SUPERFAMILY SSF46785 275 348 8.71E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02730 ec5acf6fb331457532f423b16f570c43 357 Gene3D G3DSA:1.10.8.60 200 260 3.0E-32 T 19-04-2016 ALIDE2_RS02730 ec5acf6fb331457532f423b16f570c43 357 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 27 253 7.6E-116 T 19-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 ALIDE2_RS02730 ec5acf6fb331457532f423b16f570c43 357 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 271 344 7.8E-33 T 19-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 ALIDE2_RS02730 ec5acf6fb331457532f423b16f570c43 357 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 357 180.642 T 19-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 ALIDE2_RS02730 ec5acf6fb331457532f423b16f570c43 357 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 268 346 4.0E-37 T 19-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 ALIDE2_RS02730 ec5acf6fb331457532f423b16f570c43 357 Gene3D G3DSA:1.10.10.10 282 345 3.7E-34 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08815 a8ad5d861dd88530333cd4969eb96a21 301 Gene3D G3DSA:3.30.420.10 122 284 3.7E-34 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS08815 a8ad5d861dd88530333cd4969eb96a21 301 PANTHER PTHR32552 3 300 6.2E-66 T 19-04-2016 ALIDE2_RS08815 a8ad5d861dd88530333cd4969eb96a21 301 Pfam PF00665 Integrase core domain 128 244 2.1E-25 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS08815 a8ad5d861dd88530333cd4969eb96a21 301 Pfam PF13276 HTH-like domain 47 103 2.0E-17 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS08815 a8ad5d861dd88530333cd4969eb96a21 301 SUPERFAMILY SSF53098 121 286 8.65E-35 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS02945 3f2bdb2b92e9ce649510d1aded58d635 274 SUPERFAMILY SSF56534 15 265 6.41E-93 T 19-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 ALIDE2_RS02945 3f2bdb2b92e9ce649510d1aded58d635 274 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 226 245 8.8E-11 T 19-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 ALIDE2_RS02945 3f2bdb2b92e9ce649510d1aded58d635 274 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 194 212 8.8E-11 T 19-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 ALIDE2_RS02945 3f2bdb2b92e9ce649510d1aded58d635 274 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 89 111 8.8E-11 T 19-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 ALIDE2_RS02945 3f2bdb2b92e9ce649510d1aded58d635 274 Gene3D G3DSA:1.10.800.10 21 268 7.2E-89 T 19-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 ALIDE2_RS02945 3f2bdb2b92e9ce649510d1aded58d635 274 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 25 265 4.7E-96 T 19-04-2016 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158|UniPathway: UPA00139 ALIDE2_RS02945 3f2bdb2b92e9ce649510d1aded58d635 274 PANTHER PTHR11473:SF24 35 247 5.5E-66 T 19-04-2016 ALIDE2_RS02945 3f2bdb2b92e9ce649510d1aded58d635 274 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 34 248 2.8E-43 T 19-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 ALIDE2_RS02945 3f2bdb2b92e9ce649510d1aded58d635 274 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 132 143 - T 19-04-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 ALIDE2_RS02945 3f2bdb2b92e9ce649510d1aded58d635 274 PANTHER PTHR11473 35 247 5.5E-66 T 19-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 ALIDE2_RS17345 812f5cb26c51eac88cacac264d08ca21 413 PANTHER PTHR24023 63 400 6.5E-41 T 19-04-2016 ALIDE2_RS17345 812f5cb26c51eac88cacac264d08ca21 413 PANTHER PTHR24023:SF593 63 400 6.5E-41 T 19-04-2016 ALIDE2_RS17345 812f5cb26c51eac88cacac264d08ca21 413 Gene3D G3DSA:3.40.50.10540 320 413 2.0E-122 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS17345 812f5cb26c51eac88cacac264d08ca21 413 Gene3D G3DSA:3.40.50.10540 6 231 2.0E-122 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS17345 812f5cb26c51eac88cacac264d08ca21 413 Pfam PF02515 CoA-transferase family III 9 390 4.0E-135 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS17345 812f5cb26c51eac88cacac264d08ca21 413 Gene3D G3DSA:3.30.1540.10 237 319 4.1E-35 T 19-04-2016 ALIDE2_RS17345 812f5cb26c51eac88cacac264d08ca21 413 SUPERFAMILY SSF89796 7 413 1.24E-144 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS11435 d8bd9d44955cbdb7621a6a22b24d055a 305 Gene3D G3DSA:3.40.190.10 178 262 2.7E-14 T 19-04-2016 ALIDE2_RS11435 d8bd9d44955cbdb7621a6a22b24d055a 305 Pfam PF03466 LysR substrate binding domain 89 297 9.2E-35 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS11435 d8bd9d44955cbdb7621a6a22b24d055a 305 SUPERFAMILY SSF53850 90 298 2.39E-33 T 19-04-2016 ALIDE2_RS11435 d8bd9d44955cbdb7621a6a22b24d055a 305 Gene3D G3DSA:1.10.10.10 5 85 2.0E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11435 d8bd9d44955cbdb7621a6a22b24d055a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.4E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11435 d8bd9d44955cbdb7621a6a22b24d055a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.4E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11435 d8bd9d44955cbdb7621a6a22b24d055a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.4E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11435 d8bd9d44955cbdb7621a6a22b24d055a 305 Gene3D G3DSA:3.40.190.10 89 177 4.6E-26 T 19-04-2016 ALIDE2_RS11435 d8bd9d44955cbdb7621a6a22b24d055a 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.2E-22 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11435 d8bd9d44955cbdb7621a6a22b24d055a 305 SUPERFAMILY SSF46785 5 85 5.84E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11435 d8bd9d44955cbdb7621a6a22b24d055a 305 PANTHER PTHR30346:SF0 1 294 1.3E-71 T 19-04-2016 ALIDE2_RS11435 d8bd9d44955cbdb7621a6a22b24d055a 305 PANTHER PTHR30346 1 294 1.3E-71 T 19-04-2016 ALIDE2_RS10025 937bb3d39d63a7f11e94902f5a846bd7 766 SMART SM00885 333 473 8.8E-43 T 19-04-2016 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal ALIDE2_RS10025 937bb3d39d63a7f11e94902f5a846bd7 766 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 424 726 1.3E-113 T 19-04-2016 IPR006500 DNA primase, phage/plasmid ALIDE2_RS10025 937bb3d39d63a7f11e94902f5a846bd7 766 Gene3D G3DSA:3.40.1360.10 187 293 1.3E-7 T 19-04-2016 ALIDE2_RS10025 937bb3d39d63a7f11e94902f5a846bd7 766 Gene3D G3DSA:3.40.50.300 450 653 1.3E-4 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10025 937bb3d39d63a7f11e94902f5a846bd7 766 PANTHER PTHR35372 328 738 3.3E-118 T 19-04-2016 ALIDE2_RS10025 937bb3d39d63a7f11e94902f5a846bd7 766 Pfam PF08706 D5 N terminal like 336 472 2.3E-34 T 19-04-2016 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal ALIDE2_RS10025 937bb3d39d63a7f11e94902f5a846bd7 766 PANTHER PTHR35372:SF2 328 738 3.3E-118 T 19-04-2016 ALIDE2_RS22620 a74fd97eba15d65723e157f142d5fb1c 411 SUPERFAMILY SSF53649 8 405 3.6E-111 T 19-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 ALIDE2_RS22620 a74fd97eba15d65723e157f142d5fb1c 411 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 22 357 5.5E-31 T 19-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 ALIDE2_RS22620 a74fd97eba15d65723e157f142d5fb1c 411 TIGRFAM TIGR02335 hydr_PhnA: phosphonoacetate hydrolase 8 409 1.1E-188 T 19-04-2016 IPR012710 Phosphonoacetate hydrolase GO:0047400 KEGG: 00440+3.11.1.2 ALIDE2_RS22620 a74fd97eba15d65723e157f142d5fb1c 411 Gene3D G3DSA:3.40.720.10 10 303 1.5E-67 T 19-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 ALIDE2_RS03175 0f85b43a79e5929c5761e08bee8360e9 397 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 89 107 - T 19-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 ALIDE2_RS03175 0f85b43a79e5929c5761e08bee8360e9 397 ProSitePatterns PS00737 Thiolases signature 2. 343 359 - T 19-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 ALIDE2_RS03175 0f85b43a79e5929c5761e08bee8360e9 397 Gene3D G3DSA:3.40.47.10 281 396 3.5E-63 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS03175 0f85b43a79e5929c5761e08bee8360e9 397 Gene3D G3DSA:3.40.47.10 149 188 3.5E-63 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS03175 0f85b43a79e5929c5761e08bee8360e9 397 ProSitePatterns PS00099 Thiolases active site. 378 391 - T 19-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 ALIDE2_RS03175 0f85b43a79e5929c5761e08bee8360e9 397 Pfam PF00108 Thiolase, N-terminal domain 8 266 4.5E-69 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS03175 0f85b43a79e5929c5761e08bee8360e9 397 Gene3D G3DSA:3.40.47.10 6 128 9.1E-63 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS03175 0f85b43a79e5929c5761e08bee8360e9 397 Gene3D G3DSA:3.40.47.10 189 280 9.1E-63 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS03175 0f85b43a79e5929c5761e08bee8360e9 397 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 395 1.1E-135 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS03175 0f85b43a79e5929c5761e08bee8360e9 397 PANTHER PTHR18919 4 397 8.0E-160 T 19-04-2016 ALIDE2_RS03175 0f85b43a79e5929c5761e08bee8360e9 397 SUPERFAMILY SSF53901 276 396 1.02E-40 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS03175 0f85b43a79e5929c5761e08bee8360e9 397 SUPERFAMILY SSF53901 6 274 2.76E-70 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS03175 0f85b43a79e5929c5761e08bee8360e9 397 Pfam PF02803 Thiolase, C-terminal domain 276 396 2.3E-42 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS03175 0f85b43a79e5929c5761e08bee8360e9 397 PIRSF PIRSF000429 1 397 2.0E-125 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 445 3.6E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 3.6E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 3.6E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 Pfam PF16524 Periplasmic domain of Sensor histidine kinase RisS 68 172 3.6E-37 T 19-04-2016 IPR032408 Sensor histidine kinase RisS, periplasmic domain ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 Pfam PF00672 HAMP domain 181 250 4.9E-13 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 312 2.2E-6 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 SUPERFAMILY SSF55874 304 463 1.08E-29 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 SMART SM00388 255 314 2.2E-7 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 PANTHER PTHR24423 18 26 1.1E-47 T 19-04-2016 ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 PANTHER PTHR24423 194 501 1.1E-47 T 19-04-2016 ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 SUPERFAMILY SSF47384 241 312 3.14E-11 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 SMART SM00387 352 467 4.3E-21 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 SMART SM00304 200 254 5.5E-7 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 Gene3D G3DSA:3.30.565.10 315 466 3.8E-30 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 463 3.6E-15 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS17955 8c9dd6809f1cbecbdc066b1b43ab920a 501 Gene3D G3DSA:1.10.287.130 245 310 3.4E-14 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS22230 162498144fca8966a0558051849b9018 389 SUPERFAMILY SSF52440 9 106 8.78E-23 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS22230 162498144fca8966a0558051849b9018 389 PANTHER PTHR11609 7 374 2.5E-121 T 19-04-2016 ALIDE2_RS22230 162498144fca8966a0558051849b9018 389 Gene3D G3DSA:3.30.1490.20 124 186 1.8E-18 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS22230 162498144fca8966a0558051849b9018 389 Gene3D G3DSA:3.40.50.20 6 117 1.7E-31 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS22230 162498144fca8966a0558051849b9018 389 SUPERFAMILY SSF56059 109 304 2.47E-55 T 19-04-2016 ALIDE2_RS22230 162498144fca8966a0558051849b9018 389 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 13 368 3.2E-108 T 19-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 ALIDE2_RS22230 162498144fca8966a0558051849b9018 389 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 13 370 38.217 T 19-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 ALIDE2_RS22230 162498144fca8966a0558051849b9018 389 SUPERFAMILY SSF51246 310 383 2.2E-16 T 19-04-2016 IPR011054 Rudiment single hybrid motif ALIDE2_RS22230 162498144fca8966a0558051849b9018 389 PANTHER PTHR11609:SF5 7 374 2.5E-121 T 19-04-2016 ALIDE2_RS22230 162498144fca8966a0558051849b9018 389 Pfam PF02222 ATP-grasp domain 120 287 8.3E-43 T 19-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 ALIDE2_RS22230 162498144fca8966a0558051849b9018 389 Gene3D G3DSA:3.30.470.20 187 383 9.9E-63 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS12265 a119a294f411c74bdb361f8222894f55 526 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS12265 a119a294f411c74bdb361f8222894f55 526 Gene3D G3DSA:2.30.38.10 342 417 5.1E-25 T 19-04-2016 ALIDE2_RS12265 a119a294f411c74bdb361f8222894f55 526 Pfam PF13193 AMP-binding enzyme C-terminal domain 432 507 4.1E-22 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS12265 a119a294f411c74bdb361f8222894f55 526 PANTHER PTHR24096 15 523 8.5E-139 T 19-04-2016 ALIDE2_RS12265 a119a294f411c74bdb361f8222894f55 526 SUPERFAMILY SSF56801 9 519 1.14E-139 T 19-04-2016 ALIDE2_RS12265 a119a294f411c74bdb361f8222894f55 526 PANTHER PTHR24096:SF232 15 523 8.5E-139 T 19-04-2016 ALIDE2_RS12265 a119a294f411c74bdb361f8222894f55 526 Gene3D G3DSA:3.40.50.980 17 176 2.2E-30 T 19-04-2016 ALIDE2_RS12265 a119a294f411c74bdb361f8222894f55 526 Pfam PF00501 AMP-binding enzyme 22 423 1.2E-88 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS12265 a119a294f411c74bdb361f8222894f55 526 Gene3D G3DSA:3.30.300.30 418 518 6.9E-35 T 19-04-2016 ALIDE2_RS12265 a119a294f411c74bdb361f8222894f55 526 Gene3D G3DSA:3.40.50.980 177 324 3.2E-24 T 19-04-2016 ALIDE2_RS08165 803257559f62db4248403a70c145de12 278 Gene3D G3DSA:3.90.226.10 23 277 3.3E-62 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS08165 803257559f62db4248403a70c145de12 278 Pfam PF00378 Enoyl-CoA hydratase/isomerase 29 277 2.6E-50 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS08165 803257559f62db4248403a70c145de12 278 SUPERFAMILY SSF52096 10 277 8.46E-68 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS08165 803257559f62db4248403a70c145de12 278 PANTHER PTHR11941 7 276 1.4E-75 T 19-04-2016 ALIDE2_RS08165 803257559f62db4248403a70c145de12 278 PANTHER PTHR11941:SF86 7 276 1.4E-75 T 19-04-2016 ALIDE2_RS18240 e12e260e34e74d482e7acf0eb0a3f293 323 Pfam PF03193 Protein of unknown function, DUF258 69 252 3.9E-41 T 19-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 ALIDE2_RS18240 e12e260e34e74d482e7acf0eb0a3f293 323 SUPERFAMILY SSF50249 8 58 9.85E-7 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS18240 e12e260e34e74d482e7acf0eb0a3f293 323 Gene3D G3DSA:1.10.40.50 254 319 5.9E-23 T 19-04-2016 ALIDE2_RS18240 e12e260e34e74d482e7acf0eb0a3f293 323 PANTHER PTHR32120:SF2 2 319 3.1E-92 T 19-04-2016 ALIDE2_RS18240 e12e260e34e74d482e7acf0eb0a3f293 323 Gene3D G3DSA:2.40.50.140 6 69 1.4E-9 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS18240 e12e260e34e74d482e7acf0eb0a3f293 323 Gene3D G3DSA:3.40.50.300 84 252 1.9E-39 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18240 e12e260e34e74d482e7acf0eb0a3f293 323 PANTHER PTHR32120 2 319 3.1E-92 T 19-04-2016 ALIDE2_RS18240 e12e260e34e74d482e7acf0eb0a3f293 323 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 42 313 1.1E-52 T 19-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 ALIDE2_RS18240 e12e260e34e74d482e7acf0eb0a3f293 323 SUPERFAMILY SSF52540 85 308 2.02E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18240 e12e260e34e74d482e7acf0eb0a3f293 323 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 8 321 31.954 T 19-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 ALIDE2_RS04925 c93ef716af2dba36d40ef195affdbfcd 476 SUPERFAMILY SSF63411 264 456 6.67E-31 T 19-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ALIDE2_RS04925 c93ef716af2dba36d40ef195affdbfcd 476 PANTHER PTHR11851 38 457 1.4E-98 T 19-04-2016 ALIDE2_RS04925 c93ef716af2dba36d40ef195affdbfcd 476 Pfam PF00675 Insulinase (Peptidase family M16) 53 192 1.4E-26 T 19-04-2016 IPR011765 Peptidase M16, N-terminal ALIDE2_RS04925 c93ef716af2dba36d40ef195affdbfcd 476 SUPERFAMILY SSF63411 36 248 1.05E-60 T 19-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ALIDE2_RS04925 c93ef716af2dba36d40ef195affdbfcd 476 Gene3D G3DSA:3.30.830.10 264 456 5.6E-30 T 19-04-2016 IPR011237 Peptidase M16 domain GO:0046872 ALIDE2_RS04925 c93ef716af2dba36d40ef195affdbfcd 476 Gene3D G3DSA:3.30.830.10 37 259 5.0E-57 T 19-04-2016 IPR011237 Peptidase M16 domain GO:0046872 ALIDE2_RS04925 c93ef716af2dba36d40ef195affdbfcd 476 Pfam PF05193 Peptidase M16 inactive domain 202 388 7.0E-26 T 19-04-2016 IPR007863 Peptidase M16, C-terminal ALIDE2_RS04925 c93ef716af2dba36d40ef195affdbfcd 476 PANTHER PTHR11851:SF136 38 457 1.4E-98 T 19-04-2016 ALIDE2_RS08270 461ed6c6c5f3b0cf5aca149413111867 191 Pfam PF00578 AhpC/TSA family 11 136 7.9E-30 T 19-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS08270 461ed6c6c5f3b0cf5aca149413111867 191 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 191 1.1E-90 T 19-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS08270 461ed6c6c5f3b0cf5aca149413111867 191 PIRSF PIRSF000239 3 191 8.9E-45 T 19-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 ALIDE2_RS08270 461ed6c6c5f3b0cf5aca149413111867 191 SUPERFAMILY SSF52833 22 190 2.3E-50 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS08270 461ed6c6c5f3b0cf5aca149413111867 191 PANTHER PTHR10681:SF121 1 191 3.4E-81 T 19-04-2016 ALIDE2_RS08270 461ed6c6c5f3b0cf5aca149413111867 191 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 186 1.3E-5 T 19-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS08270 461ed6c6c5f3b0cf5aca149413111867 191 PANTHER PTHR10681 1 191 3.4E-81 T 19-04-2016 ALIDE2_RS08270 461ed6c6c5f3b0cf5aca149413111867 191 Gene3D G3DSA:3.40.30.10 4 187 6.5E-57 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 SUPERFAMILY SSF55785 258 355 6.46E-17 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 Gene3D G3DSA:3.30.70.270 485 652 1.1E-60 T 19-04-2016 ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 Pfam PF00672 HAMP domain 161 227 2.0E-9 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 Gene3D G3DSA:3.20.20.450 660 908 4.0E-97 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 Pfam PF00989 PAS fold 247 347 1.8E-8 T 19-04-2016 IPR013767 PAS fold GO:0006355 ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 SMART SM00091 358 424 2.2E-5 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 SMART SM00091 246 313 7.9E-9 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 18 119 4.7E-13 T 19-04-2016 IPR029095 NarX-like, N-terminal ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 SMART SM00052 654 901 2.6E-107 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 Pfam PF13426 PAS domain 369 471 4.9E-14 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 SUPERFAMILY SSF141868 660 909 8.89E-87 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 PANTHER PTHR10799 516 754 1.5E-85 T 19-04-2016 ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 481 641 1.1E-45 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 SMART SM00086 310 350 0.27 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 SMART SM00086 430 472 0.027 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 SMART SM00304 180 232 2.6E-7 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 SMART SM00267 472 644 2.9E-68 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 PANTHER PTHR10799:SF774 103 229 1.5E-85 T 19-04-2016 ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 PANTHER PTHR10799:SF774 516 754 1.5E-85 T 19-04-2016 ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 Pfam PF00990 Diguanylate cyclase, GGDEF domain 483 640 2.7E-53 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 PANTHER PTHR10799 103 229 1.5E-85 T 19-04-2016 ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 Gene3D G3DSA:3.30.450.20 241 348 1.7E-15 T 19-04-2016 ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 SUPERFAMILY SSF158472 180 229 1.96E-5 T 19-04-2016 ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 362 477 1.2E-16 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 243 354 2.7E-18 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 Gene3D G3DSA:3.30.450.20 367 471 3.6E-25 T 19-04-2016 ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 SUPERFAMILY SSF55785 347 470 1.92E-23 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 SUPERFAMILY SSF55073 488 644 1.73E-52 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS21790 e279d358bcc50d66b2b5c143195db030 921 Pfam PF00563 EAL domain 660 896 6.3E-73 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS12750 22c7384a882844eaf6e76faf531efc99 306 Gene3D G3DSA:3.40.50.300 25 180 1.2E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12750 22c7384a882844eaf6e76faf531efc99 306 Gene3D G3DSA:1.10.8.300 199 294 2.6E-28 T 19-04-2016 ALIDE2_RS12750 22c7384a882844eaf6e76faf531efc99 306 PIRSF PIRSF002849 1 306 2.5E-120 T 19-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted ALIDE2_RS12750 22c7384a882844eaf6e76faf531efc99 306 PANTHER PTHR11603 7 306 5.9E-141 T 19-04-2016 ALIDE2_RS12750 22c7384a882844eaf6e76faf531efc99 306 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 37 167 5.9E-62 T 19-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 ALIDE2_RS12750 22c7384a882844eaf6e76faf531efc99 306 SUPERFAMILY SSF52540 5 281 2.83E-42 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12750 22c7384a882844eaf6e76faf531efc99 306 SMART SM00382 34 175 2.0E-4 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS12750 22c7384a882844eaf6e76faf531efc99 306 PANTHER PTHR11603:SF155 7 306 5.9E-141 T 19-04-2016 ALIDE2_RS04725 68ca4306a19ee81d5f64c6595326a320 288 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 6 253 3.2E-56 T 19-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS04725 68ca4306a19ee81d5f64c6595326a320 288 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 5 269 29.222 T 19-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS04725 68ca4306a19ee81d5f64c6595326a320 288 Pfam PF08544 GHMP kinases C terminal 210 250 3.2E-6 T 19-04-2016 IPR013750 GHMP kinase, C-terminal domain ALIDE2_RS04725 68ca4306a19ee81d5f64c6595326a320 288 Pfam PF00288 GHMP kinases N terminal domain 86 143 5.3E-9 T 19-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 ALIDE2_RS04725 68ca4306a19ee81d5f64c6595326a320 288 SUPERFAMILY SSF54211 7 157 6.15E-42 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS04725 68ca4306a19ee81d5f64c6595326a320 288 PANTHER PTHR20861 5 249 2.7E-70 T 19-04-2016 ALIDE2_RS04725 68ca4306a19ee81d5f64c6595326a320 288 Gene3D G3DSA:3.30.230.10 7 158 8.3E-53 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALIDE2_RS04725 68ca4306a19ee81d5f64c6595326a320 288 PIRSF PIRSF010376 3 283 1.3E-77 T 19-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS04725 68ca4306a19ee81d5f64c6595326a320 288 Gene3D G3DSA:3.30.70.890 164 280 1.6E-30 T 19-04-2016 IPR013750 GHMP kinase, C-terminal domain ALIDE2_RS04725 68ca4306a19ee81d5f64c6595326a320 288 PANTHER PTHR20861:SF2 5 249 2.7E-70 T 19-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS04725 68ca4306a19ee81d5f64c6595326a320 288 SUPERFAMILY SSF55060 164 268 5.18E-21 T 19-04-2016 IPR013750 GHMP kinase, C-terminal domain ALIDE2_RS04675 cfb0dca782fbeb317abab75bbdbb1560 496 Gene3D G3DSA:3.90.76.10 40 192 3.3E-37 T 19-04-2016 ALIDE2_RS04675 cfb0dca782fbeb317abab75bbdbb1560 496 PANTHER PTHR30290 16 482 1.0E-123 T 19-04-2016 ALIDE2_RS04675 cfb0dca782fbeb317abab75bbdbb1560 496 PANTHER PTHR30290:SF14 16 482 1.0E-123 T 19-04-2016 ALIDE2_RS04675 cfb0dca782fbeb317abab75bbdbb1560 496 PIRSF PIRSF002741 1 495 1.4E-93 T 19-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ALIDE2_RS04675 cfb0dca782fbeb317abab75bbdbb1560 496 Gene3D G3DSA:3.10.105.10 268 465 5.6E-49 T 19-04-2016 ALIDE2_RS04675 cfb0dca782fbeb317abab75bbdbb1560 496 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 400 4.5E-81 T 19-04-2016 IPR000914 Solute-binding protein family 5 domain ALIDE2_RS04675 cfb0dca782fbeb317abab75bbdbb1560 496 SUPERFAMILY SSF53850 28 494 2.02E-118 T 19-04-2016 ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 Gene3D G3DSA:3.30.1490.20 131 201 1.5E-25 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 Pfam PF02785 Biotin carboxylase C-terminal domain 336 440 5.8E-32 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 SUPERFAMILY SSF56059 84 347 8.49E-68 T 19-04-2016 ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 322 4.0E-74 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 SMART SM00878 336 440 1.8E-49 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 Gene3D G3DSA:2.40.50.100 594 663 2.2E-22 T 19-04-2016 ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 1.9E-42 T 19-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 SUPERFAMILY SSF52440 2 114 2.23E-45 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 SUPERFAMILY SSF51246 331 441 1.73E-34 T 19-04-2016 IPR011054 Rudiment single hybrid motif ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 SMART SM01209 115 293 0.0064 T 19-04-2016 ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 Gene3D G3DSA:3.30.470.20 203 441 2.6E-92 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 Gene3D G3DSA:3.40.50.20 4 130 2.8E-48 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 Pfam PF00364 Biotin-requiring enzyme 598 662 9.5E-16 T 19-04-2016 IPR000089 Biotin/lipoyl attachment ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 PANTHER PTHR18866 1 664 1.2E-274 T 19-04-2016 ALIDE2_RS00090 f403d17a6bd7cd2309b0f6c87d0cd257 672 SUPERFAMILY SSF51230 590 663 3.01E-19 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 Pfam PF02780 Transketolase, C-terminal domain 561 666 9.0E-14 T 19-04-2016 IPR033248 Transketolase, C-terminal domain ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 Gene3D G3DSA:3.40.50.970 3 322 1.7E-128 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 Gene3D G3DSA:3.40.50.970 327 540 6.8E-78 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 PANTHER PTHR11624 1 310 0.0 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 PANTHER PTHR11624 329 678 0.0 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 19-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 Pfam PF02779 Transketolase, pyrimidine binding domain 354 535 2.5E-46 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 672 4.9E-276 T 19-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 Gene3D G3DSA:3.40.50.920 547 676 2.8E-41 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 334 3.9E-156 T 19-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 SMART SM00861 355 536 7.4E-67 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 PANTHER PTHR11624:SF1 1 310 0.0 T 19-04-2016 ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 PANTHER PTHR11624:SF1 329 678 0.0 T 19-04-2016 ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 SUPERFAMILY SSF52518 5 321 1.23E-116 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 SUPERFAMILY SSF52922 542 676 5.63E-39 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS22370 f38ef2c31a4d32abf786715463046cfd 678 SUPERFAMILY SSF52518 344 537 2.82E-64 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS15805 36a5564850f9611d445f14a2c8c4d6f3 225 Gene3D G3DSA:1.10.10.10 3 74 3.7E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15805 36a5564850f9611d445f14a2c8c4d6f3 225 Pfam PF07729 FCD domain 83 203 1.9E-18 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS15805 36a5564850f9611d445f14a2c8c4d6f3 225 SUPERFAMILY SSF48008 81 213 3.14E-27 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS15805 36a5564850f9611d445f14a2c8c4d6f3 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 73 8.0E-17 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS15805 36a5564850f9611d445f14a2c8c4d6f3 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.0E-5 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS15805 36a5564850f9611d445f14a2c8c4d6f3 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.0E-5 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS15805 36a5564850f9611d445f14a2c8c4d6f3 225 SMART SM00345 15 73 7.9E-14 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS15805 36a5564850f9611d445f14a2c8c4d6f3 225 SMART SM00895 83 205 2.5E-16 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS15805 36a5564850f9611d445f14a2c8c4d6f3 225 SUPERFAMILY SSF46785 6 91 4.31E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15805 36a5564850f9611d445f14a2c8c4d6f3 225 PANTHER PTHR11751 12 99 4.1E-24 T 19-04-2016 ALIDE2_RS15805 36a5564850f9611d445f14a2c8c4d6f3 225 Gene3D G3DSA:1.20.120.530 77 216 3.1E-38 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS02970 1c6b7bf0e24d1cc8ebc4622996ffcaf6 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 7.3E-68 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02970 1c6b7bf0e24d1cc8ebc4622996ffcaf6 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 7.3E-68 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02970 1c6b7bf0e24d1cc8ebc4622996ffcaf6 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 7.3E-68 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02970 1c6b7bf0e24d1cc8ebc4622996ffcaf6 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 7.3E-68 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02970 1c6b7bf0e24d1cc8ebc4622996ffcaf6 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 7.3E-68 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02970 1c6b7bf0e24d1cc8ebc4622996ffcaf6 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 242 258 7.3E-68 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02970 1c6b7bf0e24d1cc8ebc4622996ffcaf6 312 Gene3D G3DSA:1.20.58.180 206 287 1.6E-36 T 19-04-2016 ALIDE2_RS02970 1c6b7bf0e24d1cc8ebc4622996ffcaf6 312 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 282 59.925 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02970 1c6b7bf0e24d1cc8ebc4622996ffcaf6 312 Gene3D G3DSA:3.30.930.10 1 204 1.8E-107 T 19-04-2016 ALIDE2_RS02970 1c6b7bf0e24d1cc8ebc4622996ffcaf6 312 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 288 1.5E-156 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02970 1c6b7bf0e24d1cc8ebc4622996ffcaf6 312 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 280 2.0E-150 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02970 1c6b7bf0e24d1cc8ebc4622996ffcaf6 312 SUPERFAMILY SSF55681 3 281 4.05E-134 T 19-04-2016 ALIDE2_RS02970 1c6b7bf0e24d1cc8ebc4622996ffcaf6 312 PANTHER PTHR30075 2 301 1.5E-245 T 19-04-2016 ALIDE2_RS01765 29de612fdbe3a0c9a607347380c85d2f 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 203 2.2E-68 T 19-04-2016 IPR013005 50S ribosomal protein uL4 ALIDE2_RS01765 29de612fdbe3a0c9a607347380c85d2f 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.765 T 19-04-2016 IPR013005 50S ribosomal protein uL4 ALIDE2_RS01765 29de612fdbe3a0c9a607347380c85d2f 206 SUPERFAMILY SSF52166 1 205 2.35E-68 T 19-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01765 29de612fdbe3a0c9a607347380c85d2f 206 PANTHER PTHR10746 1 204 2.5E-67 T 19-04-2016 IPR013005 50S ribosomal protein uL4 ALIDE2_RS01765 29de612fdbe3a0c9a607347380c85d2f 206 Gene3D G3DSA:3.40.1370.10 57 205 5.0E-50 T 19-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01765 29de612fdbe3a0c9a607347380c85d2f 206 Pfam PF00573 Ribosomal protein L4/L1 family 16 203 6.9E-62 T 19-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS13155 0fcc0d155446eb2a48086b2de766d241 275 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 32 93 1.2E-16 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS13155 0fcc0d155446eb2a48086b2de766d241 275 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 29 117 4.0E-31 T 19-04-2016 IPR003725 Molybdenum-binding protein ModE, N-terminal ALIDE2_RS13155 0fcc0d155446eb2a48086b2de766d241 275 PIRSF PIRSF005763 11 275 7.3E-93 T 19-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 ALIDE2_RS13155 0fcc0d155446eb2a48086b2de766d241 275 Pfam PF03459 TOBE domain 209 271 2.8E-16 T 19-04-2016 IPR005116 Transport-associated OB, type 1 ALIDE2_RS13155 0fcc0d155446eb2a48086b2de766d241 275 Pfam PF03459 TOBE domain 135 199 9.5E-16 T 19-04-2016 IPR005116 Transport-associated OB, type 1 ALIDE2_RS13155 0fcc0d155446eb2a48086b2de766d241 275 SUPERFAMILY SSF50331 133 205 1.85E-21 T 19-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal ALIDE2_RS13155 0fcc0d155446eb2a48086b2de766d241 275 Gene3D G3DSA:2.40.50.100 136 203 5.8E-29 T 19-04-2016 ALIDE2_RS13155 0fcc0d155446eb2a48086b2de766d241 275 Gene3D G3DSA:2.40.50.100 206 274 4.4E-27 T 19-04-2016 ALIDE2_RS13155 0fcc0d155446eb2a48086b2de766d241 275 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 133 202 9.0E-21 T 19-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 ALIDE2_RS13155 0fcc0d155446eb2a48086b2de766d241 275 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 207 274 1.7E-19 T 19-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 ALIDE2_RS13155 0fcc0d155446eb2a48086b2de766d241 275 PANTHER PTHR30432 1 275 1.8E-56 T 19-04-2016 ALIDE2_RS13155 0fcc0d155446eb2a48086b2de766d241 275 SUPERFAMILY SSF46785 13 119 1.27E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS13155 0fcc0d155446eb2a48086b2de766d241 275 Gene3D G3DSA:1.10.10.10 10 135 3.6E-45 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS13155 0fcc0d155446eb2a48086b2de766d241 275 SUPERFAMILY SSF50331 207 274 1.8E-19 T 19-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal ALIDE2_RS02660 a34e591cc596d13a72affbb7109deacf 147 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 4 142 3.3E-51 T 19-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 ALIDE2_RS02660 a34e591cc596d13a72affbb7109deacf 147 Gene3D G3DSA:3.50.80.10 1 143 2.6E-55 T 19-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain ALIDE2_RS02660 a34e591cc596d13a72affbb7109deacf 147 SUPERFAMILY SSF69500 1 143 2.88E-53 T 19-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain ALIDE2_RS02660 a34e591cc596d13a72affbb7109deacf 147 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 143 4.7E-52 T 19-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 ALIDE2_RS02660 a34e591cc596d13a72affbb7109deacf 147 PANTHER PTHR10472 2 141 9.0E-66 T 19-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 ALIDE2_RS02660 a34e591cc596d13a72affbb7109deacf 147 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 33.534 T 19-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 183 197 1.1E-47 T 19-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 411 430 1.1E-47 T 19-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 249 276 1.1E-47 T 19-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 151 171 1.1E-47 T 19-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 215 229 1.1E-47 T 19-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 452 30.287 T 19-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 Gene3D G3DSA:1.10.1750.10 352 452 8.9E-41 T 19-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 PANTHER PTHR30050 1 99 2.9E-189 T 19-04-2016 ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 PANTHER PTHR30050 116 453 2.9E-189 T 19-04-2016 ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 SMART SM00382 150 284 7.4E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 SUPERFAMILY SSF48295 349 452 1.33E-35 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 PANTHER PTHR30050:SF2 116 453 2.9E-189 T 19-04-2016 ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 2 451 2.1E-167 T 19-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 SMART SM00760 361 430 7.5E-44 T 19-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 PANTHER PTHR30050:SF2 1 99 2.9E-189 T 19-04-2016 ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 ProSitePatterns PS01008 DnaA protein signature. 411 430 - T 19-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 SUPERFAMILY SSF52540 117 329 5.3E-39 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 Pfam PF00308 Bacterial dnaA protein 118 335 1.1E-83 T 19-04-2016 IPR013317 Chromosomal replication initiator protein DnaA ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 Gene3D G3DSA:1.10.8.60 284 351 2.0E-27 T 19-04-2016 ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 Gene3D G3DSA:3.40.50.300 113 282 1.8E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 362 430 9.4E-33 T 19-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ALIDE2_RS00015 6be8e1a589476b88aceb70dc82589b4e 453 Pfam PF11638 DnaA N-terminal domain 1 62 2.7E-16 T 19-04-2016 IPR024633 DnaA N-terminal domain ALIDE2_RS04005 6698ede316dacc6ae753c232c49c39d5 290 PANTHER PTHR13369 36 261 6.0E-24 T 19-04-2016 ALIDE2_RS04005 6698ede316dacc6ae753c232c49c39d5 290 Gene3D G3DSA:3.40.50.150 53 183 3.6E-8 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS04005 6698ede316dacc6ae753c232c49c39d5 290 Pfam PF13679 Methyltransferase domain 46 186 5.4E-41 T 19-04-2016 IPR025714 Methyltransferase domain ALIDE2_RS04005 6698ede316dacc6ae753c232c49c39d5 290 SUPERFAMILY SSF53335 51 183 1.55E-14 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS19675 64980524b97a79a4f9d70a337f8d0a7b 80 Pfam PF13276 HTH-like domain 34 74 1.2E-9 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS19675 64980524b97a79a4f9d70a337f8d0a7b 80 PANTHER PTHR32552:SF35 1 74 1.5E-17 T 19-04-2016 ALIDE2_RS19675 64980524b97a79a4f9d70a337f8d0a7b 80 PANTHER PTHR32552 1 74 1.5E-17 T 19-04-2016 ALIDE2_RS19105 64980524b97a79a4f9d70a337f8d0a7b 80 Pfam PF13276 HTH-like domain 34 74 1.2E-9 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS19105 64980524b97a79a4f9d70a337f8d0a7b 80 PANTHER PTHR32552:SF35 1 74 1.5E-17 T 19-04-2016 ALIDE2_RS19105 64980524b97a79a4f9d70a337f8d0a7b 80 PANTHER PTHR32552 1 74 1.5E-17 T 19-04-2016 ALIDE2_RS03965 1594bc7bd18b51239156c8a3af46fe60 203 PANTHER PTHR40278 4 200 1.3E-35 T 19-04-2016 ALIDE2_RS03965 1594bc7bd18b51239156c8a3af46fe60 203 PANTHER PTHR40278:SF1 4 200 1.3E-35 T 19-04-2016 ALIDE2_RS03965 1594bc7bd18b51239156c8a3af46fe60 203 Pfam PF05137 Fimbrial assembly protein (PilN) 100 182 1.1E-21 T 19-04-2016 IPR007813 Fimbrial assembly PilN ALIDE2_RS18560 c02f9036ad208a1c2a9c452b96f76ea1 120 SUPERFAMILY SSF69118 13 109 1.02E-28 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS18560 c02f9036ad208a1c2a9c452b96f76ea1 120 Pfam PF02627 Carboxymuconolactone decarboxylase family 26 108 1.6E-22 T 19-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS18560 c02f9036ad208a1c2a9c452b96f76ea1 120 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 43 91 5.1E-14 T 19-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS18560 c02f9036ad208a1c2a9c452b96f76ea1 120 PANTHER PTHR33930:SF2 5 112 2.7E-33 T 19-04-2016 ALIDE2_RS18560 c02f9036ad208a1c2a9c452b96f76ea1 120 Gene3D G3DSA:1.20.1290.10 9 112 1.1E-36 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS18560 c02f9036ad208a1c2a9c452b96f76ea1 120 PANTHER PTHR33930 5 112 2.7E-33 T 19-04-2016 ALIDE2_RS14890 63ace7df1742f85c55c47002518dc597 406 PIRSF PIRSF003085 18 406 9.3E-126 T 19-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 ALIDE2_RS14890 63ace7df1742f85c55c47002518dc597 406 Pfam PF02353 Mycolic acid cyclopropane synthetase 131 401 2.3E-85 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS14890 63ace7df1742f85c55c47002518dc597 406 PANTHER PTHR10108:SF795 337 405 9.6E-102 T 19-04-2016 ALIDE2_RS14890 63ace7df1742f85c55c47002518dc597 406 PANTHER PTHR10108:SF795 64 320 9.6E-102 T 19-04-2016 ALIDE2_RS14890 63ace7df1742f85c55c47002518dc597 406 Gene3D G3DSA:3.40.50.150 126 404 2.4E-98 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS14890 63ace7df1742f85c55c47002518dc597 406 SUPERFAMILY SSF53335 138 405 1.14E-77 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS14890 63ace7df1742f85c55c47002518dc597 406 PANTHER PTHR10108 337 405 9.6E-102 T 19-04-2016 ALIDE2_RS14890 63ace7df1742f85c55c47002518dc597 406 PANTHER PTHR10108 64 320 9.6E-102 T 19-04-2016 ALIDE2_RS18495 0c0d2b1cba81e9e9aae8bba601fdd6fe 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 134 3.4E-11 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ALIDE2_RS18495 0c0d2b1cba81e9e9aae8bba601fdd6fe 328 PANTHER PTHR11695:SF605 16 328 1.2E-126 T 19-04-2016 ALIDE2_RS18495 0c0d2b1cba81e9e9aae8bba601fdd6fe 328 Pfam PF00107 Zinc-binding dehydrogenase 154 259 4.5E-29 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ALIDE2_RS18495 0c0d2b1cba81e9e9aae8bba601fdd6fe 328 SUPERFAMILY SSF50129 3 138 2.52E-35 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS18495 0c0d2b1cba81e9e9aae8bba601fdd6fe 328 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 143 164 - T 19-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 ALIDE2_RS18495 0c0d2b1cba81e9e9aae8bba601fdd6fe 328 Gene3D G3DSA:3.40.50.720 151 258 1.6E-31 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS18495 0c0d2b1cba81e9e9aae8bba601fdd6fe 328 PANTHER PTHR11695 16 328 1.2E-126 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS18495 0c0d2b1cba81e9e9aae8bba601fdd6fe 328 SMART SM00829 11 325 7.6E-32 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ALIDE2_RS18495 0c0d2b1cba81e9e9aae8bba601fdd6fe 328 SUPERFAMILY SSF51735 112 267 5.76E-47 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS18495 0c0d2b1cba81e9e9aae8bba601fdd6fe 328 Gene3D G3DSA:3.90.180.10 4 150 2.6E-45 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS02435 65c8995e5815eb4c7c2e8306b4c60fb6 252 Gene3D G3DSA:3.30.450.40 85 249 1.2E-36 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS02435 65c8995e5815eb4c7c2e8306b4c60fb6 252 PANTHER PTHR30136 6 247 1.1E-31 T 19-04-2016 ALIDE2_RS02435 65c8995e5815eb4c7c2e8306b4c60fb6 252 Pfam PF09339 IclR helix-turn-helix domain 11 61 2.2E-11 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS02435 65c8995e5815eb4c7c2e8306b4c60fb6 252 SUPERFAMILY SSF46785 9 82 8.59E-12 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02435 65c8995e5815eb4c7c2e8306b4c60fb6 252 Gene3D G3DSA:1.10.10.10 7 78 3.1E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02435 65c8995e5815eb4c7c2e8306b4c60fb6 252 SUPERFAMILY SSF55781 76 248 7.85E-23 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS02435 65c8995e5815eb4c7c2e8306b4c60fb6 252 Pfam PF01614 Bacterial transcriptional regulator 132 247 6.0E-11 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS04210 c1d42db8a15394b418fa87f60fa9efcb 259 PANTHER PTHR21235:SF2 1 259 4.4E-125 T 19-04-2016 ALIDE2_RS04210 c1d42db8a15394b418fa87f60fa9efcb 259 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 258 48.862 T 19-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 ALIDE2_RS04210 c1d42db8a15394b418fa87f60fa9efcb 259 Pfam PF00977 Histidine biosynthesis protein 5 242 1.7E-88 T 19-04-2016 IPR006062 Histidine biosynthesis GO:0000105 ALIDE2_RS04210 c1d42db8a15394b418fa87f60fa9efcb 259 Gene3D G3DSA:3.20.20.70 4 259 8.1E-107 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS04210 c1d42db8a15394b418fa87f60fa9efcb 259 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 258 1.4E-111 T 19-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 ALIDE2_RS04210 c1d42db8a15394b418fa87f60fa9efcb 259 PANTHER PTHR21235 1 259 4.4E-125 T 19-04-2016 ALIDE2_RS04210 c1d42db8a15394b418fa87f60fa9efcb 259 SUPERFAMILY SSF51366 1 258 4.24E-83 T 19-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 ALIDE2_RS19795 7dc12776a9e6458d7c2e93f7c60ba336 646 SMART SM00382 430 562 5.6E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS19795 7dc12776a9e6458d7c2e93f7c60ba336 646 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 435 560 7.0E-24 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS19795 7dc12776a9e6458d7c2e93f7c60ba336 646 SUPERFAMILY SSF52540 386 610 8.35E-39 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19795 7dc12776a9e6458d7c2e93f7c60ba336 646 PANTHER PTHR23073 435 610 1.4E-40 T 19-04-2016 ALIDE2_RS19795 7dc12776a9e6458d7c2e93f7c60ba336 646 PANTHER PTHR23073:SF24 435 610 1.4E-40 T 19-04-2016 ALIDE2_RS19795 7dc12776a9e6458d7c2e93f7c60ba336 646 SUPERFAMILY SSF52540 193 354 1.5E-6 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19795 7dc12776a9e6458d7c2e93f7c60ba336 646 Gene3D G3DSA:3.40.50.300 388 574 3.6E-36 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02275 2bf55f3c74f89093dcd0e53dbb04e541 497 Pfam PF02913 FAD linked oxidases, C-terminal domain 229 469 2.8E-65 T 19-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ALIDE2_RS02275 2bf55f3c74f89093dcd0e53dbb04e541 497 SUPERFAMILY SSF55103 202 472 6.7E-68 T 19-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ALIDE2_RS02275 2bf55f3c74f89093dcd0e53dbb04e541 497 Gene3D G3DSA:3.30.43.10 6 108 3.1E-25 T 19-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 ALIDE2_RS02275 2bf55f3c74f89093dcd0e53dbb04e541 497 PANTHER PTHR11748:SF78 14 482 1.8E-184 T 19-04-2016 ALIDE2_RS02275 2bf55f3c74f89093dcd0e53dbb04e541 497 PANTHER PTHR11748 14 482 1.8E-184 T 19-04-2016 ALIDE2_RS02275 2bf55f3c74f89093dcd0e53dbb04e541 497 Gene3D G3DSA:1.10.45.10 430 469 3.3E-8 T 19-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ALIDE2_RS02275 2bf55f3c74f89093dcd0e53dbb04e541 497 SUPERFAMILY SSF56176 17 229 3.83E-63 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS02275 2bf55f3c74f89093dcd0e53dbb04e541 497 Pfam PF01565 FAD binding domain 54 192 2.8E-37 T 19-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ALIDE2_RS02275 2bf55f3c74f89093dcd0e53dbb04e541 497 Gene3D G3DSA:3.30.465.10 109 229 2.1E-27 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ALIDE2_RS04810 af4248f59308edd5856aa2aeb20ea1cb 401 Pfam PF13006 Insertion element 4 transposase N-terminal 19 115 1.0E-23 T 19-04-2016 IPR024473 Transposase, IS4, N-terminal ALIDE2_RS04810 af4248f59308edd5856aa2aeb20ea1cb 401 PANTHER PTHR37529 28 391 6.1E-18 T 19-04-2016 ALIDE2_RS04810 af4248f59308edd5856aa2aeb20ea1cb 401 Pfam PF01609 Transposase DDE domain 137 359 7.0E-17 T 19-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS04810 af4248f59308edd5856aa2aeb20ea1cb 401 SUPERFAMILY SSF53098 131 373 1.37E-24 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS21365 af4248f59308edd5856aa2aeb20ea1cb 401 Pfam PF13006 Insertion element 4 transposase N-terminal 19 115 1.0E-23 T 19-04-2016 IPR024473 Transposase, IS4, N-terminal ALIDE2_RS21365 af4248f59308edd5856aa2aeb20ea1cb 401 PANTHER PTHR37529 28 391 6.1E-18 T 19-04-2016 ALIDE2_RS21365 af4248f59308edd5856aa2aeb20ea1cb 401 Pfam PF01609 Transposase DDE domain 137 359 7.0E-17 T 19-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS21365 af4248f59308edd5856aa2aeb20ea1cb 401 SUPERFAMILY SSF53098 131 373 1.37E-24 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS02940 18cb762300cf709f4fd5892456d279d9 373 PANTHER PTHR11959 7 372 4.7E-103 T 19-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 ALIDE2_RS02940 18cb762300cf709f4fd5892456d279d9 373 Gene3D G3DSA:3.10.180.10 15 158 3.3E-46 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS02940 18cb762300cf709f4fd5892456d279d9 373 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 23 365 7.8E-112 T 19-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 ALIDE2_RS02940 18cb762300cf709f4fd5892456d279d9 373 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 16 154 4.0E-68 T 19-04-2016 ALIDE2_RS02940 18cb762300cf709f4fd5892456d279d9 373 Gene3D G3DSA:3.10.180.10 167 366 2.4E-59 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS02940 18cb762300cf709f4fd5892456d279d9 373 SUPERFAMILY SSF54593 14 353 5.51E-81 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS02940 18cb762300cf709f4fd5892456d279d9 373 PIRSF PIRSF009283 7 367 7.6E-107 T 19-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 ALIDE2_RS02940 18cb762300cf709f4fd5892456d279d9 373 PANTHER PTHR11959:SF1 7 372 4.7E-103 T 19-04-2016 ALIDE2_RS02940 18cb762300cf709f4fd5892456d279d9 373 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 171 286 1.4E-13 T 19-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ALIDE2_RS09280 f1831de172f74f869d9caba7167976d3 300 SUPERFAMILY SSF53474 22 293 3.44E-51 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS09280 f1831de172f74f869d9caba7167976d3 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 73 88 4.6E-6 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS09280 f1831de172f74f869d9caba7167976d3 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 131 144 4.6E-6 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS09280 f1831de172f74f869d9caba7167976d3 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 4.6E-6 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS09280 f1831de172f74f869d9caba7167976d3 300 Pfam PF12697 Alpha/beta hydrolase family 50 284 7.1E-23 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS09280 f1831de172f74f869d9caba7167976d3 300 Gene3D G3DSA:3.40.50.1820 24 292 1.6E-54 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS09280 f1831de172f74f869d9caba7167976d3 300 PANTHER PTHR10992 26 293 1.0E-41 T 19-04-2016 ALIDE2_RS04405 03a9dda0320ab1934394a1680a54b6f5 349 SUPERFAMILY SSF56349 157 310 7.36E-7 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS04405 03a9dda0320ab1934394a1680a54b6f5 349 Gene3D G3DSA:1.10.443.10 152 313 9.9E-8 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS09845 e545edc9c5ac89be82f95458235448c8 394 SMART SM00116 340 388 1.0E-9 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS09845 e545edc9c5ac89be82f95458235448c8 394 SMART SM00116 260 308 3.3E-7 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS09845 e545edc9c5ac89be82f95458235448c8 394 Pfam PF00571 CBS domain 335 388 1.3E-11 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS09845 e545edc9c5ac89be82f95458235448c8 394 Pfam PF00571 CBS domain 254 306 7.2E-10 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS09845 e545edc9c5ac89be82f95458235448c8 394 PANTHER PTHR11911 221 388 9.4E-26 T 19-04-2016 ALIDE2_RS09845 e545edc9c5ac89be82f95458235448c8 394 Gene3D G3DSA:3.10.580.10 251 388 2.0E-29 T 19-04-2016 ALIDE2_RS09845 e545edc9c5ac89be82f95458235448c8 394 PANTHER PTHR11911:SF90 221 388 9.4E-26 T 19-04-2016 ALIDE2_RS09845 e545edc9c5ac89be82f95458235448c8 394 Pfam PF04982 HPP family 75 191 3.5E-30 T 19-04-2016 IPR007065 HPP ALIDE2_RS09845 e545edc9c5ac89be82f95458235448c8 394 SUPERFAMILY SSF54631 243 388 2.04E-33 T 19-04-2016 ALIDE2_RS21180 8bdd9f9c2dedc17f4a9dab44f068de68 686 PANTHER PTHR11070 1 515 6.7E-257 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 ALIDE2_RS21180 8bdd9f9c2dedc17f4a9dab44f068de68 686 PANTHER PTHR11070 535 652 6.7E-257 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 ALIDE2_RS21180 8bdd9f9c2dedc17f4a9dab44f068de68 686 SUPERFAMILY SSF52540 2 653 2.46E-153 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21180 8bdd9f9c2dedc17f4a9dab44f068de68 686 Gene3D G3DSA:1.10.10.160 107 178 2.4E-14 T 19-04-2016 IPR013986 DExx box DNA helicase domain ALIDE2_RS21180 8bdd9f9c2dedc17f4a9dab44f068de68 686 Gene3D G3DSA:3.40.50.300 179 276 1.6E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21180 8bdd9f9c2dedc17f4a9dab44f068de68 686 Gene3D G3DSA:3.40.50.300 2 103 1.6E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21180 8bdd9f9c2dedc17f4a9dab44f068de68 686 Pfam PF13361 UvrD-like helicase C-terminal domain 268 632 9.1E-58 T 19-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ALIDE2_RS21180 8bdd9f9c2dedc17f4a9dab44f068de68 686 Gene3D G3DSA:1.10.486.10 382 545 1.2E-30 T 19-04-2016 ALIDE2_RS21180 8bdd9f9c2dedc17f4a9dab44f068de68 686 PANTHER PTHR11070:SF19 1 515 6.7E-257 T 19-04-2016 ALIDE2_RS21180 8bdd9f9c2dedc17f4a9dab44f068de68 686 PANTHER PTHR11070:SF19 535 652 6.7E-257 T 19-04-2016 ALIDE2_RS21180 8bdd9f9c2dedc17f4a9dab44f068de68 686 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 682 36.512 T 19-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 ALIDE2_RS21180 8bdd9f9c2dedc17f4a9dab44f068de68 686 Gene3D G3DSA:3.40.50.300 277 381 1.7E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21180 8bdd9f9c2dedc17f4a9dab44f068de68 686 Gene3D G3DSA:3.40.50.300 558 655 1.7E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21180 8bdd9f9c2dedc17f4a9dab44f068de68 686 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 262 9.6E-67 T 19-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 SUPERFAMILY SSF51246 339 457 2.09E-37 T 19-04-2016 IPR011054 Rudiment single hybrid motif ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 Gene3D G3DSA:3.30.1490.20 129 202 3.5E-29 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 SMART SM00878 344 455 2.7E-54 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 SUPERFAMILY SSF56059 83 356 3.18E-65 T 19-04-2016 ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 PANTHER PTHR18866 1 670 0.0 T 19-04-2016 ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 SUPERFAMILY SSF51230 598 670 1.15E-21 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 294 301 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 SUPERFAMILY SSF52440 1 113 1.01E-47 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 Pfam PF02785 Biotin carboxylase C-terminal domain 344 455 2.7E-37 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 Gene3D G3DSA:2.40.50.100 601 670 1.1E-25 T 19-04-2016 ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 Gene3D G3DSA:3.30.470.20 205 458 9.6E-103 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.7E-44 T 19-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 Gene3D G3DSA:3.40.50.20 1 128 7.2E-52 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 331 1.7E-74 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 Pfam PF00364 Biotin-requiring enzyme 605 670 3.3E-18 T 19-04-2016 IPR000089 Biotin/lipoyl attachment ALIDE2_RS20530 fbff7df7920eb0f35cdb05063db4b686 673 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 627 644 - T 19-04-2016 IPR001882 Biotin-binding site ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 Pfam PF08521 Two-component sensor kinase N-terminal 24 166 3.7E-32 T 19-04-2016 IPR013727 Two-component sensor kinase, N-terminal ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 9.7E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 9.7E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 9.7E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 461 7.3E-18 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 SUPERFAMILY SSF47384 229 309 1.0E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 SUPERFAMILY SSF55874 300 461 2.1E-34 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 SMART SM00388 246 311 2.2E-6 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 310 1.6E-6 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 SMART SM00387 355 462 8.3E-27 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 Gene3D G3DSA:1.10.287.130 237 307 4.9E-9 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 Gene3D G3DSA:3.30.565.10 315 461 2.5E-34 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 PANTHER PTHR24423 184 462 1.1E-56 T 19-04-2016 ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 PANTHER PTHR24423 3 16 1.1E-56 T 19-04-2016 ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 PANTHER PTHR24423:SF474 184 462 1.1E-56 T 19-04-2016 ALIDE2_RS12405 b8462cae9d8d8140bcb6b83e24ba8329 462 PANTHER PTHR24423:SF474 3 16 1.1E-56 T 19-04-2016 ALIDE2_RS02190 f61b25c5a9d2fd6ddf386a0d06008fc3 231 PANTHER PTHR11374 1 230 3.3E-130 T 19-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 ALIDE2_RS02190 f61b25c5a9d2fd6ddf386a0d06008fc3 231 Gene3D G3DSA:1.20.5.100 207 230 2.5E-17 T 19-04-2016 ALIDE2_RS02190 f61b25c5a9d2fd6ddf386a0d06008fc3 231 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 5.4E-65 T 19-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS02190 f61b25c5a9d2fd6ddf386a0d06008fc3 231 PIRSF PIRSF500134 1 231 3.9E-98 T 19-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 ALIDE2_RS02190 f61b25c5a9d2fd6ddf386a0d06008fc3 231 PIRSF PIRSF000124 1 231 6.7E-78 T 19-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 ALIDE2_RS02190 f61b25c5a9d2fd6ddf386a0d06008fc3 231 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 230 2.3E-8 T 19-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS02190 f61b25c5a9d2fd6ddf386a0d06008fc3 231 PANTHER PTHR11374:SF18 1 230 3.3E-130 T 19-04-2016 ALIDE2_RS02190 f61b25c5a9d2fd6ddf386a0d06008fc3 231 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 230 1.3E-77 T 19-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 ALIDE2_RS02190 f61b25c5a9d2fd6ddf386a0d06008fc3 231 SUPERFAMILY SSF51735 1 195 2.11E-56 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS02190 f61b25c5a9d2fd6ddf386a0d06008fc3 231 SUPERFAMILY SSF48179 204 230 2.21E-6 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS02190 f61b25c5a9d2fd6ddf386a0d06008fc3 231 Gene3D G3DSA:3.40.50.720 1 206 2.1E-77 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS20245 d355b7323a312095377ae27ec16af2cd 564 SUPERFAMILY SSF58104 227 508 7.06E-76 T 19-04-2016 ALIDE2_RS20245 d355b7323a312095377ae27ec16af2cd 564 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 416 5.3E-60 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS20245 d355b7323a312095377ae27ec16af2cd 564 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 24 5.3E-60 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS20245 d355b7323a312095377ae27ec16af2cd 564 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 281 310 5.3E-60 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS20245 d355b7323a312095377ae27ec16af2cd 564 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 358 385 5.3E-60 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS20245 d355b7323a312095377ae27ec16af2cd 564 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 435 464 5.3E-60 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS20245 d355b7323a312095377ae27ec16af2cd 564 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 166 2.4E-23 T 19-04-2016 IPR024478 4HB MCP domain ALIDE2_RS20245 d355b7323a312095377ae27ec16af2cd 564 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 312 506 1.8E-62 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS20245 d355b7323a312095377ae27ec16af2cd 564 PANTHER PTHR32089:SF63 98 510 1.1E-158 T 19-04-2016 ALIDE2_RS20245 d355b7323a312095377ae27ec16af2cd 564 Gene3D G3DSA:1.10.287.950 274 479 1.3E-62 T 19-04-2016 ALIDE2_RS20245 d355b7323a312095377ae27ec16af2cd 564 Pfam PF00672 HAMP domain 188 255 6.4E-15 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS20245 d355b7323a312095377ae27ec16af2cd 564 SMART SM00283 260 507 4.0E-93 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS20245 d355b7323a312095377ae27ec16af2cd 564 SMART SM00304 207 259 7.3E-11 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS20245 d355b7323a312095377ae27ec16af2cd 564 PANTHER PTHR32089 98 510 1.1E-158 T 19-04-2016 ALIDE2_RS21835 b2124cb05fde2e3d64dc326a03d7f187 150 Gene3D G3DSA:1.10.260.40 13 80 4.4E-5 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS11830 c3902b364fe3812c08290cb7f00e23d4 394 PANTHER PTHR18919:SF95 1 394 2.7E-194 T 19-04-2016 ALIDE2_RS11830 c3902b364fe3812c08290cb7f00e23d4 394 Gene3D G3DSA:3.40.47.10 195 276 1.7E-65 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS11830 c3902b364fe3812c08290cb7f00e23d4 394 Gene3D G3DSA:3.40.47.10 4 125 1.7E-65 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS11830 c3902b364fe3812c08290cb7f00e23d4 394 SUPERFAMILY SSF53901 4 270 8.52E-81 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS11830 c3902b364fe3812c08290cb7f00e23d4 394 PIRSF PIRSF000429 1 394 1.1E-126 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS11830 c3902b364fe3812c08290cb7f00e23d4 394 Pfam PF02803 Thiolase, C-terminal domain 272 393 3.1E-46 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS11830 c3902b364fe3812c08290cb7f00e23d4 394 Pfam PF00108 Thiolase, N-terminal domain 5 263 2.2E-87 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS11830 c3902b364fe3812c08290cb7f00e23d4 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 392 5.6E-135 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS11830 c3902b364fe3812c08290cb7f00e23d4 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 19-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 ALIDE2_RS11830 c3902b364fe3812c08290cb7f00e23d4 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 19-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 ALIDE2_RS11830 c3902b364fe3812c08290cb7f00e23d4 394 Gene3D G3DSA:3.40.47.10 144 194 2.6E-64 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS11830 c3902b364fe3812c08290cb7f00e23d4 394 Gene3D G3DSA:3.40.47.10 278 393 2.6E-64 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS11830 c3902b364fe3812c08290cb7f00e23d4 394 SUPERFAMILY SSF53901 272 393 3.67E-44 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS11830 c3902b364fe3812c08290cb7f00e23d4 394 PANTHER PTHR18919 1 394 2.7E-194 T 19-04-2016 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 792 849 1.8E-29 T 19-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 22 860 1.6E-281 T 19-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 19 860 94.877 T 19-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR01159 DNA gyrase subunit B signature 229 242 2.9E-76 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR01159 DNA gyrase subunit B signature 829 845 2.9E-76 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR01159 DNA gyrase subunit B signature 22 32 2.9E-76 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR01159 DNA gyrase subunit B signature 513 522 2.9E-76 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR01159 DNA gyrase subunit B signature 214 229 2.9E-76 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR01159 DNA gyrase subunit B signature 253 275 2.9E-76 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR01159 DNA gyrase subunit B signature 813 825 2.9E-76 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR01159 DNA gyrase subunit B signature 403 417 2.9E-76 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR01159 DNA gyrase subunit B signature 417 437 2.9E-76 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR01159 DNA gyrase subunit B signature 285 303 2.9E-76 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR01159 DNA gyrase subunit B signature 355 371 2.9E-76 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 Gene3D G3DSA:3.30.565.10 22 249 3.7E-90 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 SUPERFAMILY SSF56719 786 850 3.66E-84 T 19-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 SUPERFAMILY SSF56719 437 614 3.66E-84 T 19-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 Gene3D G3DSA:3.40.50.670 447 604 8.3E-98 T 19-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 Gene3D G3DSA:3.40.50.670 774 842 8.3E-98 T 19-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 Gene3D G3DSA:3.30.230.10 253 435 9.7E-71 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 Pfam PF00204 DNA gyrase B 254 433 1.2E-56 T 19-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR00418 DNA topoisomerase II family signature 52 67 7.5E-68 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR00418 DNA topoisomerase II family signature 87 100 7.5E-68 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR00418 DNA topoisomerase II family signature 792 808 7.5E-68 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR00418 DNA topoisomerase II family signature 134 148 7.5E-68 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR00418 DNA topoisomerase II family signature 559 576 7.5E-68 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR00418 DNA topoisomerase II family signature 463 477 7.5E-68 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR00418 DNA topoisomerase II family signature 311 324 7.5E-68 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR00418 DNA topoisomerase II family signature 541 557 7.5E-68 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PRINTS PR00418 DNA topoisomerase II family signature 579 591 7.5E-68 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 SMART SM00433 52 853 5.1E-245 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 Pfam PF01751 Toprim domain 462 585 2.8E-18 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PANTHER PTHR10169 780 860 2.2E-276 T 19-04-2016 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 PANTHER PTHR10169 3 607 2.2E-276 T 19-04-2016 ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 SMART SM00387 48 208 1.0E-19 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 49 206 4.9E-21 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 SUPERFAMILY SSF54211 254 435 5.31E-55 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 SUPERFAMILY SSF55874 22 247 7.86E-64 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS00025 5f0fee884bba11dbf43560698f0aa131 860 ProSitePatterns PS00177 DNA topoisomerase II signature. 465 473 - T 19-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS23275 f49bc539b24e51a9d36bef2069fe480d 377 SMART SM00267 193 365 2.8E-64 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS23275 f49bc539b24e51a9d36bef2069fe480d 377 SUPERFAMILY SSF55073 209 365 2.04E-50 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS23275 f49bc539b24e51a9d36bef2069fe480d 377 PANTHER PTHR10799 237 364 1.4E-30 T 19-04-2016 ALIDE2_RS23275 f49bc539b24e51a9d36bef2069fe480d 377 PANTHER PTHR10799 57 205 1.4E-30 T 19-04-2016 ALIDE2_RS23275 f49bc539b24e51a9d36bef2069fe480d 377 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 201 364 2.4E-52 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS23275 f49bc539b24e51a9d36bef2069fe480d 377 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 361 7.7E-48 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS23275 f49bc539b24e51a9d36bef2069fe480d 377 Gene3D G3DSA:3.30.70.270 206 368 6.4E-57 T 19-04-2016 ALIDE2_RS23275 f49bc539b24e51a9d36bef2069fe480d 377 Pfam PF05230 MASE2 domain 28 105 1.5E-13 T 19-04-2016 IPR007894 MASE2 ALIDE2_RS23275 f49bc539b24e51a9d36bef2069fe480d 377 PANTHER PTHR10799:SF750 237 364 1.4E-30 T 19-04-2016 ALIDE2_RS23275 f49bc539b24e51a9d36bef2069fe480d 377 PANTHER PTHR10799:SF750 57 205 1.4E-30 T 19-04-2016 ALIDE2_RS23470 c49b5d29c11cb34edd0e5e6071ed8056 246 TIGRFAM TIGR00035 asp_race: aspartate racemase 8 242 4.3E-41 T 19-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 ALIDE2_RS23470 c49b5d29c11cb34edd0e5e6071ed8056 246 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 93 101 - T 19-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS23470 c49b5d29c11cb34edd0e5e6071ed8056 246 Pfam PF01177 Asp/Glu/Hydantoin racemase 13 239 6.4E-51 T 19-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS23470 c49b5d29c11cb34edd0e5e6071ed8056 246 Gene3D G3DSA:3.40.50.1860 128 231 4.9E-25 T 19-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS23470 c49b5d29c11cb34edd0e5e6071ed8056 246 PANTHER PTHR21198 1 238 8.4E-32 T 19-04-2016 ALIDE2_RS23470 c49b5d29c11cb34edd0e5e6071ed8056 246 SUPERFAMILY SSF53681 9 130 6.1E-22 T 19-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS23470 c49b5d29c11cb34edd0e5e6071ed8056 246 SUPERFAMILY SSF53681 132 243 1.8E-19 T 19-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS23470 c49b5d29c11cb34edd0e5e6071ed8056 246 PANTHER PTHR21198:SF6 1 238 8.4E-32 T 19-04-2016 ALIDE2_RS23470 c49b5d29c11cb34edd0e5e6071ed8056 246 Gene3D G3DSA:3.40.50.1860 8 127 1.0E-33 T 19-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS15215 43a460fe8a463a26f1ce21d4657b4a8a 342 Pfam PF09588 YqaJ-like viral recombinase domain 38 179 1.2E-37 T 19-04-2016 IPR019080 YqaJ viral recombinase ALIDE2_RS15215 43a460fe8a463a26f1ce21d4657b4a8a 342 SUPERFAMILY SSF52980 34 222 5.9E-33 T 19-04-2016 IPR011335 Restriction endonuclease type II-like ALIDE2_RS15215 43a460fe8a463a26f1ce21d4657b4a8a 342 Gene3D G3DSA:3.90.320.10 31 222 2.2E-30 T 19-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 ALIDE2_RS15215 43a460fe8a463a26f1ce21d4657b4a8a 342 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 33 189 7.4E-48 T 19-04-2016 IPR017482 Putative phage-type endonuclease ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 SMART SM00357 52 118 4.9E-16 T 19-04-2016 IPR011129 Cold shock protein GO:0003676 ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 SUPERFAMILY SSF68912 1 46 1.45E-10 T 19-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 239.424 T 19-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 Gene3D G3DSA:1.10.720.10 1 47 8.1E-18 T 19-04-2016 ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 SUPERFAMILY SSF50249 49 125 1.16E-27 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 Gene3D G3DSA:2.40.50.140 49 117 1.0E-32 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 Gene3D G3DSA:3.40.50.300 131 418 3.2E-103 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 PANTHER PTHR15184:SF34 54 418 2.3E-181 T 19-04-2016 ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 SMART SM00959 5 47 1.4E-14 T 19-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 SMART SM00382 170 349 2.4E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.2E-13 T 19-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 3.2E-207 T 19-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 9.8E-30 T 19-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 8.5E-22 T 19-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 SUPERFAMILY SSF52540 90 371 5.46E-68 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13245 d4481adcecbed70da8ff3c1808c4f803 420 PANTHER PTHR15184 54 418 2.3E-181 T 19-04-2016 ALIDE2_RS23335 f91629755064616bbf851198f402c25e 255 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 35 62 - T 19-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 ALIDE2_RS23335 f91629755064616bbf851198f402c25e 255 Gene3D G3DSA:1.10.8.100 192 252 9.5E-15 T 19-04-2016 IPR023165 rRNA adenine dimethylase-like ALIDE2_RS23335 f91629755064616bbf851198f402c25e 255 Gene3D G3DSA:3.40.50.150 3 189 3.0E-65 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS23335 f91629755064616bbf851198f402c25e 255 Pfam PF00398 Ribosomal RNA adenine dimethylase 6 226 3.0E-55 T 19-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm ALIDE2_RS23335 f91629755064616bbf851198f402c25e 255 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 3 253 53.336 T 19-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 ALIDE2_RS23335 f91629755064616bbf851198f402c25e 255 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 5 251 1.3E-74 T 19-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 ALIDE2_RS23335 f91629755064616bbf851198f402c25e 255 PANTHER PTHR11727 3 252 2.4E-73 T 19-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm ALIDE2_RS23335 f91629755064616bbf851198f402c25e 255 SMART SM00650 19 189 2.7E-72 T 19-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 ALIDE2_RS23335 f91629755064616bbf851198f402c25e 255 SUPERFAMILY SSF53335 3 253 3.31E-64 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS03575 09347faf7a2e96f20f54d4c5ba1082f1 548 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 535 1.0E-11 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS03575 09347faf7a2e96f20f54d4c5ba1082f1 548 Gene3D G3DSA:2.30.38.10 351 439 1.7E-19 T 19-04-2016 ALIDE2_RS03575 09347faf7a2e96f20f54d4c5ba1082f1 548 TIGRFAM TIGR03098 ligase_PEP_1: acyl-CoA ligase (AMP-forming), exosortase A-associated 18 540 4.3E-221 T 19-04-2016 IPR017529 Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated ALIDE2_RS03575 09347faf7a2e96f20f54d4c5ba1082f1 548 Gene3D G3DSA:3.30.300.30 441 540 2.6E-22 T 19-04-2016 ALIDE2_RS03575 09347faf7a2e96f20f54d4c5ba1082f1 548 PANTHER PTHR24096 420 540 2.3E-123 T 19-04-2016 ALIDE2_RS03575 09347faf7a2e96f20f54d4c5ba1082f1 548 PANTHER PTHR24096 14 401 2.3E-123 T 19-04-2016 ALIDE2_RS03575 09347faf7a2e96f20f54d4c5ba1082f1 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS03575 09347faf7a2e96f20f54d4c5ba1082f1 548 Pfam PF00501 AMP-binding enzyme 25 446 8.2E-91 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS03575 09347faf7a2e96f20f54d4c5ba1082f1 548 Gene3D G3DSA:3.40.50.980 19 192 6.2E-38 T 19-04-2016 ALIDE2_RS03575 09347faf7a2e96f20f54d4c5ba1082f1 548 Gene3D G3DSA:3.40.50.980 193 350 3.0E-35 T 19-04-2016 ALIDE2_RS03575 09347faf7a2e96f20f54d4c5ba1082f1 548 SUPERFAMILY SSF56801 11 539 3.79E-135 T 19-04-2016 ALIDE2_RS01370 9fc57ffd5405041dcab0a063abc17f39 308 Gene3D G3DSA:3.10.180.10 153 284 5.9E-47 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS01370 9fc57ffd5405041dcab0a063abc17f39 308 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 151 266 2.7E-18 T 19-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ALIDE2_RS01370 9fc57ffd5405041dcab0a063abc17f39 308 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 120 3.3E-8 T 19-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ALIDE2_RS01370 9fc57ffd5405041dcab0a063abc17f39 308 PANTHER PTHR21366 6 77 1.9E-17 T 19-04-2016 ALIDE2_RS01370 9fc57ffd5405041dcab0a063abc17f39 308 PANTHER PTHR21366 191 284 1.9E-17 T 19-04-2016 ALIDE2_RS01370 9fc57ffd5405041dcab0a063abc17f39 308 TIGRFAM TIGR03211 catechol_2_3: catechol 2,3 dioxygenase 5 308 4.0E-130 T 19-04-2016 IPR017624 Catechol 2,3 dioxygenase GO:0008198|GO:0018577|GO:0019439|GO:0055114 KEGG: 00361+1.13.11.2|KEGG: 00362+1.13.11.2|KEGG: 00622+1.13.11.2|KEGG: 00643+1.13.11.2|MetaCyc: PWY-5419|MetaCyc: PWY-5641 ALIDE2_RS01370 9fc57ffd5405041dcab0a063abc17f39 308 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 245 266 - T 19-04-2016 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 ALIDE2_RS01370 9fc57ffd5405041dcab0a063abc17f39 308 Gene3D G3DSA:3.10.180.10 2 152 5.6E-37 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS01370 9fc57ffd5405041dcab0a063abc17f39 308 PANTHER PTHR21366:SF17 6 77 1.9E-17 T 19-04-2016 ALIDE2_RS01370 9fc57ffd5405041dcab0a063abc17f39 308 PANTHER PTHR21366:SF17 191 284 1.9E-17 T 19-04-2016 ALIDE2_RS01370 9fc57ffd5405041dcab0a063abc17f39 308 SUPERFAMILY SSF54593 1 274 4.01E-41 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS07755 b8acefbb886dcc44d2bd67bd274d807b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.3E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07755 b8acefbb886dcc44d2bd67bd274d807b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 1.3E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07755 b8acefbb886dcc44d2bd67bd274d807b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.3E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07755 b8acefbb886dcc44d2bd67bd274d807b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.3E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07755 b8acefbb886dcc44d2bd67bd274d807b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 1.3E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07755 b8acefbb886dcc44d2bd67bd274d807b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.3E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07755 b8acefbb886dcc44d2bd67bd274d807b 257 PANTHER PTHR24322 164 196 9.7E-55 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07755 b8acefbb886dcc44d2bd67bd274d807b 257 PANTHER PTHR24322 16 145 9.7E-55 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07755 b8acefbb886dcc44d2bd67bd274d807b 257 Gene3D G3DSA:3.40.50.720 6 256 1.8E-79 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS07755 b8acefbb886dcc44d2bd67bd274d807b 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 254 3.0E-55 T 19-04-2016 ALIDE2_RS07755 b8acefbb886dcc44d2bd67bd274d807b 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.3E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07755 b8acefbb886dcc44d2bd67bd274d807b 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.3E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07755 b8acefbb886dcc44d2bd67bd274d807b 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 1.3E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07755 b8acefbb886dcc44d2bd67bd274d807b 257 SUPERFAMILY SSF51735 11 256 3.19E-75 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS07755 b8acefbb886dcc44d2bd67bd274d807b 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS13510 6f99487edb7e3a353e640c6af7069c47 806 PANTHER PTHR31273 19 803 2.4E-159 T 19-04-2016 ALIDE2_RS13510 6f99487edb7e3a353e640c6af7069c47 806 Pfam PF09364 XFP N-terminal domain 69 309 1.1E-9 T 19-04-2016 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal ALIDE2_RS13510 6f99487edb7e3a353e640c6af7069c47 806 SUPERFAMILY SSF52518 83 361 4.94E-18 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS13510 6f99487edb7e3a353e640c6af7069c47 806 Gene3D G3DSA:3.40.50.920 637 777 4.1E-6 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS13510 6f99487edb7e3a353e640c6af7069c47 806 SUPERFAMILY SSF52518 426 620 2.0E-7 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS13510 6f99487edb7e3a353e640c6af7069c47 806 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 437 605 3.2E-39 T 19-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 ALIDE2_RS02375 9419565f63b41dac390af7564ee58c7c 383 Pfam PF11306 Protein of unknown function (DUF3108) 135 375 2.1E-16 T 19-04-2016 IPR021457 Protein of unknown function DUF3108 ALIDE2_RS09160 eda0e19a5b7bce87b0567649f645f0a2 417 PANTHER PTHR24023 50 389 3.5E-29 T 19-04-2016 ALIDE2_RS09160 eda0e19a5b7bce87b0567649f645f0a2 417 PANTHER PTHR24023:SF593 50 389 3.5E-29 T 19-04-2016 ALIDE2_RS09160 eda0e19a5b7bce87b0567649f645f0a2 417 Pfam PF02515 CoA-transferase family III 13 379 1.1E-130 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS09160 eda0e19a5b7bce87b0567649f645f0a2 417 SUPERFAMILY SSF89796 11 402 1.09E-139 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS09160 eda0e19a5b7bce87b0567649f645f0a2 417 Gene3D G3DSA:3.30.1540.10 229 311 3.1E-30 T 19-04-2016 ALIDE2_RS09160 eda0e19a5b7bce87b0567649f645f0a2 417 Gene3D G3DSA:3.40.50.10540 9 223 8.6E-118 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS09160 eda0e19a5b7bce87b0567649f645f0a2 417 Gene3D G3DSA:3.40.50.10540 312 403 8.6E-118 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS20250 9e10dce7ee3dba519ebe36941272c731 320 SUPERFAMILY SSF56349 17 311 8.54E-51 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS20250 9e10dce7ee3dba519ebe36941272c731 320 Pfam PF00589 Phage integrase family 120 303 3.0E-39 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS20250 9e10dce7ee3dba519ebe36941272c731 320 Gene3D G3DSA:1.10.443.10 119 311 5.8E-51 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS20250 9e10dce7ee3dba519ebe36941272c731 320 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 11 317 32.943 T 19-04-2016 IPR023009 Tyrosine recombinase XerC/XerD ALIDE2_RS20250 9e10dce7ee3dba519ebe36941272c731 320 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 97 1.3E-13 T 19-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ALIDE2_RS20250 9e10dce7ee3dba519ebe36941272c731 320 PANTHER PTHR30349:SF17 1 320 9.5E-105 T 19-04-2016 ALIDE2_RS20250 9e10dce7ee3dba519ebe36941272c731 320 Gene3D G3DSA:1.10.150.130 17 107 1.5E-22 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS20250 9e10dce7ee3dba519ebe36941272c731 320 PANTHER PTHR30349 1 320 9.5E-105 T 19-04-2016 ALIDE2_RS15045 b0ad1eaa2f202e19346eaaca1f7a5512 958 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 15 52 1.4E-17 T 19-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ALIDE2_RS15045 b0ad1eaa2f202e19346eaaca1f7a5512 958 Pfam PF00676 Dehydrogenase E1 component 223 507 4.3E-39 T 19-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 ALIDE2_RS15045 b0ad1eaa2f202e19346eaaca1f7a5512 958 SUPERFAMILY SSF52518 585 806 4.29E-47 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS15045 b0ad1eaa2f202e19346eaaca1f7a5512 958 PANTHER PTHR23152:SF4 1 957 0.0 T 19-04-2016 ALIDE2_RS15045 b0ad1eaa2f202e19346eaaca1f7a5512 958 PANTHER PTHR23152 1 957 0.0 T 19-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ALIDE2_RS15045 b0ad1eaa2f202e19346eaaca1f7a5512 958 Gene3D G3DSA:3.40.50.970 607 810 1.5E-20 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS15045 b0ad1eaa2f202e19346eaaca1f7a5512 958 PIRSF PIRSF000157 1 950 0.0 T 19-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ALIDE2_RS15045 b0ad1eaa2f202e19346eaaca1f7a5512 958 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 804 948 8.4E-55 T 19-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ALIDE2_RS15045 b0ad1eaa2f202e19346eaaca1f7a5512 958 SMART SM00861 602 799 6.5E-61 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ALIDE2_RS15045 b0ad1eaa2f202e19346eaaca1f7a5512 958 SUPERFAMILY SSF52518 129 554 1.28E-80 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS15045 b0ad1eaa2f202e19346eaaca1f7a5512 958 Pfam PF02779 Transketolase, pyrimidine binding domain 602 799 5.9E-62 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ALIDE2_RS15045 b0ad1eaa2f202e19346eaaca1f7a5512 958 Gene3D G3DSA:3.40.50.970 170 524 4.9E-62 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS15045 b0ad1eaa2f202e19346eaaca1f7a5512 958 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 17 947 0.0 T 19-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ALIDE2_RS19455 d1845f9c2cab293dd1574b22ed2d1572 293 PANTHER PTHR31964 1 146 7.6E-12 T 19-04-2016 ALIDE2_RS19455 d1845f9c2cab293dd1574b22ed2d1572 293 Gene3D G3DSA:3.40.50.620 133 268 1.0E-12 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS19455 d1845f9c2cab293dd1574b22ed2d1572 293 PANTHER PTHR31964:SF42 1 146 7.6E-12 T 19-04-2016 ALIDE2_RS19455 d1845f9c2cab293dd1574b22ed2d1572 293 PRINTS PR01438 Universal stress protein signature 3 21 2.8E-6 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS19455 d1845f9c2cab293dd1574b22ed2d1572 293 PRINTS PR01438 Universal stress protein signature 105 127 2.8E-6 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS19455 d1845f9c2cab293dd1574b22ed2d1572 293 PRINTS PR01438 Universal stress protein signature 87 99 2.8E-6 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS19455 d1845f9c2cab293dd1574b22ed2d1572 293 SUPERFAMILY SSF52402 2 128 3.1E-23 T 19-04-2016 ALIDE2_RS19455 d1845f9c2cab293dd1574b22ed2d1572 293 Pfam PF00582 Universal stress protein family 4 127 1.5E-11 T 19-04-2016 IPR006016 UspA GO:0006950 ALIDE2_RS19455 d1845f9c2cab293dd1574b22ed2d1572 293 Pfam PF00582 Universal stress protein family 134 265 1.5E-7 T 19-04-2016 IPR006016 UspA GO:0006950 ALIDE2_RS19455 d1845f9c2cab293dd1574b22ed2d1572 293 Gene3D G3DSA:3.40.50.620 3 127 6.7E-20 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS19455 d1845f9c2cab293dd1574b22ed2d1572 293 SUPERFAMILY SSF52402 134 267 2.26E-13 T 19-04-2016 ALIDE2_RS17800 48adf384dec13ca9316242c9939578a4 260 PIRSF PIRSF005763 4 260 4.8E-48 T 19-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 ALIDE2_RS17800 48adf384dec13ca9316242c9939578a4 260 PANTHER PTHR30432 19 233 7.6E-29 T 19-04-2016 ALIDE2_RS17800 48adf384dec13ca9316242c9939578a4 260 Gene3D G3DSA:1.10.10.10 13 120 1.0E-30 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17800 48adf384dec13ca9316242c9939578a4 260 SUPERFAMILY SSF46785 21 101 1.01E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17800 48adf384dec13ca9316242c9939578a4 260 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 85 6.8E-15 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS17800 48adf384dec13ca9316242c9939578a4 260 Gene3D G3DSA:2.40.50.100 121 185 3.7E-22 T 19-04-2016 ALIDE2_RS17800 48adf384dec13ca9316242c9939578a4 260 Pfam PF03459 TOBE domain 122 189 2.0E-13 T 19-04-2016 IPR005116 Transport-associated OB, type 1 ALIDE2_RS17800 48adf384dec13ca9316242c9939578a4 260 SUPERFAMILY SSF50331 121 190 1.82E-13 T 19-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal ALIDE2_RS00020 e181492314ce57f59c2469627982edec 368 Gene3D G3DSA:3.10.150.10 5 121 4.4E-25 T 19-04-2016 ALIDE2_RS00020 e181492314ce57f59c2469627982edec 368 SUPERFAMILY SSF55979 130 246 4.71E-29 T 19-04-2016 ALIDE2_RS00020 e181492314ce57f59c2469627982edec 368 SMART SM00480 18 364 9.8E-117 T 19-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS00020 e181492314ce57f59c2469627982edec 368 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 7 367 3.8E-93 T 19-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS00020 e181492314ce57f59c2469627982edec 368 SUPERFAMILY SSF55979 247 368 1.38E-35 T 19-04-2016 ALIDE2_RS00020 e181492314ce57f59c2469627982edec 368 PIRSF PIRSF000804 2 368 7.8E-113 T 19-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS00020 e181492314ce57f59c2469627982edec 368 Gene3D G3DSA:3.10.150.10 250 368 6.0E-36 T 19-04-2016 ALIDE2_RS00020 e181492314ce57f59c2469627982edec 368 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 7 120 1.5E-26 T 19-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS00020 e181492314ce57f59c2469627982edec 368 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 248 367 1.7E-31 T 19-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS00020 e181492314ce57f59c2469627982edec 368 SUPERFAMILY SSF55979 7 121 2.2E-21 T 19-04-2016 ALIDE2_RS00020 e181492314ce57f59c2469627982edec 368 PANTHER PTHR30478 4 368 7.6E-112 T 19-04-2016 ALIDE2_RS00020 e181492314ce57f59c2469627982edec 368 Pfam PF02767 DNA polymerase III beta subunit, central domain 132 245 1.2E-31 T 19-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS00020 e181492314ce57f59c2469627982edec 368 Gene3D G3DSA:3.10.150.10 130 249 4.1E-39 T 19-04-2016 ALIDE2_RS08495 f3705f69b0ce749e5ce04d086d5d539c 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 216 2.8E-22 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS08495 f3705f69b0ce749e5ce04d086d5d539c 222 PANTHER PTHR30614 1 221 5.2E-94 T 19-04-2016 ALIDE2_RS08495 f3705f69b0ce749e5ce04d086d5d539c 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 110 1.1E-29 T 19-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 ALIDE2_RS08495 f3705f69b0ce749e5ce04d086d5d539c 222 Gene3D G3DSA:1.10.3720.10 14 216 1.9E-52 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS08495 f3705f69b0ce749e5ce04d086d5d539c 222 SUPERFAMILY SSF161098 14 201 4.45E-47 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS12870 34b9c8550b353350a6f67b1ee5d8e159 412 SUPERFAMILY SSF111369 66 315 6.93E-78 T 19-04-2016 ALIDE2_RS12870 34b9c8550b353350a6f67b1ee5d8e159 412 Pfam PF13533 Biotin-lipoyl like 80 127 5.3E-12 T 19-04-2016 ALIDE2_RS12870 34b9c8550b353350a6f67b1ee5d8e159 412 Gene3D G3DSA:2.40.50.100 80 112 3.5E-23 T 19-04-2016 ALIDE2_RS12870 34b9c8550b353350a6f67b1ee5d8e159 412 Gene3D G3DSA:2.40.50.100 187 221 3.5E-23 T 19-04-2016 ALIDE2_RS12870 34b9c8550b353350a6f67b1ee5d8e159 412 PANTHER PTHR30158 10 411 1.7E-155 T 19-04-2016 ALIDE2_RS12870 34b9c8550b353350a6f67b1ee5d8e159 412 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 54 390 2.4E-79 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ALIDE2_RS12870 34b9c8550b353350a6f67b1ee5d8e159 412 PANTHER PTHR30158:SF3 10 411 1.7E-155 T 19-04-2016 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 SUPERFAMILY SSF55021 277 363 1.62E-24 T 19-04-2016 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 Gene3D G3DSA:3.40.190.10 180 258 2.9E-24 T 19-04-2016 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 Gene3D G3DSA:1.20.59.10 2 91 1.9E-24 T 19-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 SMART SM00830 15 94 5.1E-30 T 19-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 Gene3D G3DSA:3.30.70.260 279 365 4.5E-30 T 19-04-2016 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 SUPERFAMILY SSF48600 11 94 1.26E-21 T 19-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 TIGRFAM TIGR01807 CM_P2: chorismate mutase 11 84 3.6E-27 T 19-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 PIRSF PIRSF001500 5 366 9.3E-121 T 19-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 Pfam PF01817 Chorismate mutase type II 15 91 1.9E-23 T 19-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 SUPERFAMILY SSF53850 95 271 5.75E-51 T 19-04-2016 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 Gene3D G3DSA:3.40.190.10 92 179 1.7E-28 T 19-04-2016 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 312 319 - T 19-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 Pfam PF00800 Prephenate dehydratase 96 268 3.6E-55 T 19-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 PANTHER PTHR21022:SF0 8 364 4.7E-115 T 19-04-2016 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 Pfam PF01842 ACT domain 285 349 8.6E-9 T 19-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 ALIDE2_RS09890 498934726a540d7561ba7109595b7544 366 PANTHER PTHR21022 8 364 4.7E-115 T 19-04-2016 ALIDE2_RS22955 3b1634349f3d187faed84e8758172f8a 313 Gene3D G3DSA:3.40.190.10 180 266 1.7E-21 T 19-04-2016 ALIDE2_RS22955 3b1634349f3d187faed84e8758172f8a 313 Pfam PF03466 LysR substrate binding domain 93 294 1.5E-44 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS22955 3b1634349f3d187faed84e8758172f8a 313 Gene3D G3DSA:3.40.190.10 94 179 5.6E-25 T 19-04-2016 ALIDE2_RS22955 3b1634349f3d187faed84e8758172f8a 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.8E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22955 3b1634349f3d187faed84e8758172f8a 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.8E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22955 3b1634349f3d187faed84e8758172f8a 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.8E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22955 3b1634349f3d187faed84e8758172f8a 313 Gene3D G3DSA:1.10.10.10 5 84 1.6E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22955 3b1634349f3d187faed84e8758172f8a 313 PANTHER PTHR30419 1 312 3.2E-98 T 19-04-2016 ALIDE2_RS22955 3b1634349f3d187faed84e8758172f8a 313 SUPERFAMILY SSF46785 4 115 3.66E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22955 3b1634349f3d187faed84e8758172f8a 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.9E-20 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22955 3b1634349f3d187faed84e8758172f8a 313 SUPERFAMILY SSF53850 95 297 6.15E-43 T 19-04-2016 ALIDE2_RS22955 3b1634349f3d187faed84e8758172f8a 313 PANTHER PTHR30419:SF0 1 312 3.2E-98 T 19-04-2016 ALIDE2_RS13165 efc100bd7b67233045a999dd60843167 220 Gene3D G3DSA:1.10.3720.10 9 216 1.3E-44 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS13165 efc100bd7b67233045a999dd60843167 220 PANTHER PTHR30183 10 220 6.4E-57 T 19-04-2016 ALIDE2_RS13165 efc100bd7b67233045a999dd60843167 220 SUPERFAMILY SSF161098 9 217 3.79E-50 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS13165 efc100bd7b67233045a999dd60843167 220 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 214 5.7E-55 T 19-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 ALIDE2_RS13165 efc100bd7b67233045a999dd60843167 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 213 3.9E-15 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS08490 3e0e542c11afc5d306974d9c3655ad91 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 245 1.4E-68 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS08490 3e0e542c11afc5d306974d9c3655ad91 251 PANTHER PTHR18966:SF152 25 244 1.2E-49 T 19-04-2016 ALIDE2_RS08490 3e0e542c11afc5d306974d9c3655ad91 251 SMART SM00062 29 247 3.0E-73 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS08490 3e0e542c11afc5d306974d9c3655ad91 251 Gene3D G3DSA:3.40.190.10 106 207 7.0E-28 T 19-04-2016 ALIDE2_RS08490 3e0e542c11afc5d306974d9c3655ad91 251 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 19-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 ALIDE2_RS08490 3e0e542c11afc5d306974d9c3655ad91 251 PANTHER PTHR18966 25 244 1.2E-49 T 19-04-2016 ALIDE2_RS08490 3e0e542c11afc5d306974d9c3655ad91 251 Gene3D G3DSA:3.40.190.10 208 245 1.9E-45 T 19-04-2016 ALIDE2_RS08490 3e0e542c11afc5d306974d9c3655ad91 251 Gene3D G3DSA:3.40.190.10 26 105 1.9E-45 T 19-04-2016 ALIDE2_RS08490 3e0e542c11afc5d306974d9c3655ad91 251 SMART SM00079 29 246 5.0E-5 T 19-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 ALIDE2_RS08490 3e0e542c11afc5d306974d9c3655ad91 251 SUPERFAMILY SSF53850 8 245 4.75E-73 T 19-04-2016 ALIDE2_RS17015 731e233a79c2fbb2bac22d854c6547b1 166 PIRSF PIRSF006181 8 165 1.8E-45 T 19-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ALIDE2_RS17015 731e233a79c2fbb2bac22d854c6547b1 166 SUPERFAMILY SSF55826 10 162 2.35E-40 T 19-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ALIDE2_RS17015 731e233a79c2fbb2bac22d854c6547b1 166 Gene3D G3DSA:3.90.960.10 8 161 7.7E-47 T 19-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ALIDE2_RS17015 731e233a79c2fbb2bac22d854c6547b1 166 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 13 157 7.5E-47 T 19-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ALIDE2_RS17015 731e233a79c2fbb2bac22d854c6547b1 166 PANTHER PTHR30411 13 157 3.8E-48 T 19-04-2016 ALIDE2_RS17015 731e233a79c2fbb2bac22d854c6547b1 166 PANTHER PTHR30411:SF0 13 157 3.8E-48 T 19-04-2016 ALIDE2_RS17015 731e233a79c2fbb2bac22d854c6547b1 166 Pfam PF04073 Aminoacyl-tRNA editing domain 40 149 1.3E-24 T 19-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ALIDE2_RS06510 6cf048a0072d0a63599c9c84480ff285 356 SMART SM01329 2 351 9.0E-209 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS06510 6cf048a0072d0a63599c9c84480ff285 356 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 350 3.7E-151 T 19-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 ALIDE2_RS06510 6cf048a0072d0a63599c9c84480ff285 356 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 351 2.5E-134 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS06510 6cf048a0072d0a63599c9c84480ff285 356 SUPERFAMILY SSF53659 1 355 1.06E-123 T 19-04-2016 ALIDE2_RS06510 6cf048a0072d0a63599c9c84480ff285 356 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 355 51.122 T 19-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 ALIDE2_RS06510 6cf048a0072d0a63599c9c84480ff285 356 Gene3D G3DSA:3.40.718.10 2 355 1.6E-132 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS06510 6cf048a0072d0a63599c9c84480ff285 356 PANTHER PTHR11835 1 356 1.1E-196 T 19-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 ALIDE2_RS06510 6cf048a0072d0a63599c9c84480ff285 356 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 19-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 ALIDE2_RS06510 6cf048a0072d0a63599c9c84480ff285 356 PANTHER PTHR11835:SF35 1 356 1.1E-196 T 19-04-2016 ALIDE2_RS17390 778af13b69529547120a019ecdedd014 327 SUPERFAMILY SSF53850 114 289 1.76E-13 T 19-04-2016 ALIDE2_RS17390 778af13b69529547120a019ecdedd014 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 323 7.2E-78 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS17390 778af13b69529547120a019ecdedd014 327 PANTHER PTHR30349 1 292 3.2E-80 T 19-04-2016 ALIDE2_RS17390 778af13b69529547120a019ecdedd014 327 PANTHER PTHR30349:SF16 1 292 3.2E-80 T 19-04-2016 ALIDE2_RS17390 778af13b69529547120a019ecdedd014 327 PIRSF PIRSF017082 1 327 4.3E-71 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 PANTHER PTHR19370:SF32 27 356 8.3E-62 T 19-04-2016 ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 Gene3D G3DSA:2.40.30.10 108 200 2.0E-28 T 19-04-2016 ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 SUPERFAMILY SSF63380 107 200 3.1E-26 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 PANTHER PTHR19370 27 356 8.3E-62 T 19-04-2016 ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 Pfam PF00175 Oxidoreductase NAD-binding domain 215 319 1.3E-14 T 19-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 239 248 1.2E-23 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 307 315 1.2E-23 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 214 233 1.2E-23 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 150 157 1.2E-23 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 133 145 1.2E-23 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 Pfam PF00970 Oxidoreductase FAD-binding domain 109 199 7.9E-14 T 19-04-2016 IPR008333 Oxidoreductase, FAD-binding domain ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 80 3.1E-15 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 Gene3D G3DSA:3.40.50.80 213 340 2.0E-32 T 19-04-2016 ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 SUPERFAMILY SSF54292 1 88 4.59E-26 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 Gene3D G3DSA:3.10.20.30 2 89 5.4E-26 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS01360 158298a0b9c7c82834a122f0ab29e23d 356 SUPERFAMILY SSF52343 212 340 9.43E-31 T 19-04-2016 ALIDE2_RS17675 e6b704d39373237755c3a53d556b08d1 381 Gene3D G3DSA:3.40.50.2300 44 168 3.1E-43 T 19-04-2016 ALIDE2_RS17675 e6b704d39373237755c3a53d556b08d1 381 Gene3D G3DSA:3.40.50.2300 169 307 3.4E-45 T 19-04-2016 ALIDE2_RS17675 e6b704d39373237755c3a53d556b08d1 381 Pfam PF02608 Basic membrane protein 47 321 1.1E-56 T 19-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 ALIDE2_RS17675 e6b704d39373237755c3a53d556b08d1 381 PANTHER PTHR34296:SF1 35 368 4.1E-110 T 19-04-2016 ALIDE2_RS17675 e6b704d39373237755c3a53d556b08d1 381 PANTHER PTHR34296 35 368 4.1E-110 T 19-04-2016 ALIDE2_RS09745 c501aa8d72b65cd364e078810f46bdc4 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS09745 c501aa8d72b65cd364e078810f46bdc4 144 SMART SM00422 8 77 1.7E-30 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS09745 c501aa8d72b65cd364e078810f46bdc4 144 PANTHER PTHR30204:SF18 1 117 3.7E-27 T 19-04-2016 ALIDE2_RS09745 c501aa8d72b65cd364e078810f46bdc4 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 3.6E-26 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS09745 c501aa8d72b65cd364e078810f46bdc4 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 3.6E-26 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS09745 c501aa8d72b65cd364e078810f46bdc4 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 3.6E-26 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS09745 c501aa8d72b65cd364e078810f46bdc4 144 PANTHER PTHR30204 1 117 3.7E-27 T 19-04-2016 ALIDE2_RS09745 c501aa8d72b65cd364e078810f46bdc4 144 SUPERFAMILY SSF46955 8 130 3.22E-29 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS09745 c501aa8d72b65cd364e078810f46bdc4 144 Pfam PF00376 MerR family regulatory protein 9 46 1.0E-11 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS09745 c501aa8d72b65cd364e078810f46bdc4 144 Gene3D G3DSA:1.10.1660.10 63 137 4.3E-26 T 19-04-2016 ALIDE2_RS09745 c501aa8d72b65cd364e078810f46bdc4 144 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 9.3E-55 T 19-04-2016 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 ALIDE2_RS09745 c501aa8d72b65cd364e078810f46bdc4 144 Pfam PF09278 MerR, DNA binding 51 113 9.1E-18 T 19-04-2016 IPR015358 Transcription regulator MerR, DNA binding ALIDE2_RS09745 c501aa8d72b65cd364e078810f46bdc4 144 Gene3D G3DSA:1.10.1660.10 7 62 2.2E-24 T 19-04-2016 ALIDE2_RS06620 5f90c4b13be302945d3b45b2abd75e3a 471 SMART SM00382 222 422 7.5E-4 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS06620 5f90c4b13be302945d3b45b2abd75e3a 471 Pfam PF03796 DnaB-like helicase C terminal domain 205 462 6.4E-116 T 19-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 ALIDE2_RS06620 5f90c4b13be302945d3b45b2abd75e3a 471 PANTHER PTHR30153 11 471 9.9E-208 T 19-04-2016 ALIDE2_RS06620 5f90c4b13be302945d3b45b2abd75e3a 471 Gene3D G3DSA:3.40.50.300 191 464 1.1E-105 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06620 5f90c4b13be302945d3b45b2abd75e3a 471 Pfam PF00772 DnaB-like helicase N terminal domain 27 128 9.7E-33 T 19-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 ALIDE2_RS06620 5f90c4b13be302945d3b45b2abd75e3a 471 Gene3D G3DSA:1.10.860.10 27 129 6.7E-36 T 19-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ALIDE2_RS06620 5f90c4b13be302945d3b45b2abd75e3a 471 SUPERFAMILY SSF52540 203 455 3.26E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06620 5f90c4b13be302945d3b45b2abd75e3a 471 SUPERFAMILY SSF48024 25 136 2.09E-35 T 19-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 ALIDE2_RS06620 5f90c4b13be302945d3b45b2abd75e3a 471 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 27 464 4.5E-177 T 19-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 ALIDE2_RS05510 4ff3e78aa842accb74473d7ef4d9918a 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 9 227 5.5E-93 T 19-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 ALIDE2_RS05510 4ff3e78aa842accb74473d7ef4d9918a 228 PANTHER PTHR24220 11 228 5.3E-107 T 19-04-2016 ALIDE2_RS05510 4ff3e78aa842accb74473d7ef4d9918a 228 SMART SM00382 38 224 4.5E-12 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS05510 4ff3e78aa842accb74473d7ef4d9918a 228 SUPERFAMILY SSF52540 9 227 2.0E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05510 4ff3e78aa842accb74473d7ef4d9918a 228 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS05510 4ff3e78aa842accb74473d7ef4d9918a 228 Pfam PF00005 ABC transporter 29 177 2.7E-31 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS05510 4ff3e78aa842accb74473d7ef4d9918a 228 PANTHER PTHR24220:SF111 11 228 5.3E-107 T 19-04-2016 ALIDE2_RS05510 4ff3e78aa842accb74473d7ef4d9918a 228 Gene3D G3DSA:3.40.50.300 9 227 5.9E-65 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14385 5b43bd8268a7788726768925209021fb 321 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 9 303 6.2E-115 T 19-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 ALIDE2_RS14385 5b43bd8268a7788726768925209021fb 321 Gene3D G3DSA:3.40.50.620 209 258 1.4E-41 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS14385 5b43bd8268a7788726768925209021fb 321 Gene3D G3DSA:3.40.50.620 9 73 1.4E-41 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS14385 5b43bd8268a7788726768925209021fb 321 PANTHER PTHR11451:SF35 8 275 6.2E-79 T 19-04-2016 ALIDE2_RS14385 5b43bd8268a7788726768925209021fb 321 SUPERFAMILY SSF52374 9 301 2.82E-81 T 19-04-2016 ALIDE2_RS14385 5b43bd8268a7788726768925209021fb 321 Gene3D G3DSA:3.90.800.10 74 207 9.7E-15 T 19-04-2016 ALIDE2_RS14385 5b43bd8268a7788726768925209021fb 321 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 12 119 8.6E-23 T 19-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS14385 5b43bd8268a7788726768925209021fb 321 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 194 272 2.2E-17 T 19-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS14385 5b43bd8268a7788726768925209021fb 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 41 54 3.8E-15 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS14385 5b43bd8268a7788726768925209021fb 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 12 24 3.8E-15 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS14385 5b43bd8268a7788726768925209021fb 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 223 231 3.8E-15 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS14385 5b43bd8268a7788726768925209021fb 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 207 217 3.8E-15 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS14385 5b43bd8268a7788726768925209021fb 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 26 37 3.8E-15 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 ALIDE2_RS14385 5b43bd8268a7788726768925209021fb 321 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 9 321 41.334 T 19-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 ALIDE2_RS14385 5b43bd8268a7788726768925209021fb 321 PANTHER PTHR11451 8 275 6.2E-79 T 19-04-2016 ALIDE2_RS21070 ae6d029cdec87c459489d9bcb85739cb 396 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 389 5.2E-44 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS21070 ae6d029cdec87c459489d9bcb85739cb 396 SMART SM00267 217 391 8.9E-62 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS21070 ae6d029cdec87c459489d9bcb85739cb 396 Pfam PF00990 Diguanylate cyclase, GGDEF domain 228 387 8.9E-46 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS21070 ae6d029cdec87c459489d9bcb85739cb 396 PANTHER PTHR10799:SF750 184 387 8.6E-24 T 19-04-2016 ALIDE2_RS21070 ae6d029cdec87c459489d9bcb85739cb 396 Gene3D G3DSA:3.30.70.270 230 392 1.7E-52 T 19-04-2016 ALIDE2_RS21070 ae6d029cdec87c459489d9bcb85739cb 396 PANTHER PTHR10799 184 387 8.6E-24 T 19-04-2016 ALIDE2_RS21070 ae6d029cdec87c459489d9bcb85739cb 396 SUPERFAMILY SSF55073 233 391 4.63E-46 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS14980 f9c2c09db5840002d16d18c2f08b0cca 173 PANTHER PTHR35011:SF3 18 146 2.1E-20 T 19-04-2016 ALIDE2_RS14980 f9c2c09db5840002d16d18c2f08b0cca 173 PANTHER PTHR35011 18 146 2.1E-20 T 19-04-2016 ALIDE2_RS14980 f9c2c09db5840002d16d18c2f08b0cca 173 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 32 152 6.6E-21 T 19-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component ALIDE2_RS05530 ab793c5e9b1f5f5c625e3f701da3408d 618 Pfam PF00920 Dehydratase family 34 610 4.6E-222 T 19-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS05530 ab793c5e9b1f5f5c625e3f701da3408d 618 PANTHER PTHR21000:SF11 411 618 0.0 T 19-04-2016 ALIDE2_RS05530 ab793c5e9b1f5f5c625e3f701da3408d 618 PANTHER PTHR21000:SF11 1 376 0.0 T 19-04-2016 ALIDE2_RS05530 ab793c5e9b1f5f5c625e3f701da3408d 618 SUPERFAMILY SSF143975 4 425 2.62E-137 T 19-04-2016 ALIDE2_RS05530 ab793c5e9b1f5f5c625e3f701da3408d 618 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 613 1.9E-257 T 19-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS05530 ab793c5e9b1f5f5c625e3f701da3408d 618 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 19-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS05530 ab793c5e9b1f5f5c625e3f701da3408d 618 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 613 45.129 T 19-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS05530 ab793c5e9b1f5f5c625e3f701da3408d 618 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 514 525 - T 19-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS05530 ab793c5e9b1f5f5c625e3f701da3408d 618 SUPERFAMILY SSF52016 426 614 2.82E-62 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS05530 ab793c5e9b1f5f5c625e3f701da3408d 618 PANTHER PTHR21000 411 618 0.0 T 19-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS05530 ab793c5e9b1f5f5c625e3f701da3408d 618 PANTHER PTHR21000 1 376 0.0 T 19-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 ALIDE2_RS18485 cd08a93593ef7e4c8db6507ce5a0817b 313 Gene3D G3DSA:3.40.190.10 178 261 2.3E-26 T 19-04-2016 ALIDE2_RS18485 cd08a93593ef7e4c8db6507ce5a0817b 313 SUPERFAMILY SSF46785 3 113 2.64E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18485 cd08a93593ef7e4c8db6507ce5a0817b 313 PANTHER PTHR30419:SF3 1 310 6.3E-98 T 19-04-2016 ALIDE2_RS18485 cd08a93593ef7e4c8db6507ce5a0817b 313 Gene3D G3DSA:1.10.10.10 4 86 2.7E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18485 cd08a93593ef7e4c8db6507ce5a0817b 313 PANTHER PTHR30419 1 310 6.3E-98 T 19-04-2016 ALIDE2_RS18485 cd08a93593ef7e4c8db6507ce5a0817b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 7.7E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS18485 cd08a93593ef7e4c8db6507ce5a0817b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 7.7E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS18485 cd08a93593ef7e4c8db6507ce5a0817b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 7.7E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS18485 cd08a93593ef7e4c8db6507ce5a0817b 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.2E-20 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS18485 cd08a93593ef7e4c8db6507ce5a0817b 313 Gene3D G3DSA:3.40.190.10 92 177 4.5E-21 T 19-04-2016 ALIDE2_RS18485 cd08a93593ef7e4c8db6507ce5a0817b 313 SUPERFAMILY SSF53850 91 295 4.95E-46 T 19-04-2016 ALIDE2_RS18485 cd08a93593ef7e4c8db6507ce5a0817b 313 Pfam PF03466 LysR substrate binding domain 90 292 3.3E-48 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS01740 36b115ba663229a1eb69800c7d6b7f71 157 SUPERFAMILY SSF47973 2 150 1.57E-57 T 19-04-2016 IPR023798 Ribosomal protein S7 domain ALIDE2_RS01740 36b115ba663229a1eb69800c7d6b7f71 157 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 19-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 ALIDE2_RS01740 36b115ba663229a1eb69800c7d6b7f71 157 PIRSF PIRSF002122 3 157 5.5E-54 T 19-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 ALIDE2_RS01740 36b115ba663229a1eb69800c7d6b7f71 157 Pfam PF00177 Ribosomal protein S7p/S5e 1 150 3.3E-64 T 19-04-2016 IPR023798 Ribosomal protein S7 domain ALIDE2_RS01740 36b115ba663229a1eb69800c7d6b7f71 157 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.2E-62 T 19-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS01740 36b115ba663229a1eb69800c7d6b7f71 157 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 157 34.664 T 19-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS01740 36b115ba663229a1eb69800c7d6b7f71 157 PANTHER PTHR11205 1 157 1.0E-80 T 19-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 ALIDE2_RS01740 36b115ba663229a1eb69800c7d6b7f71 157 Gene3D G3DSA:1.10.455.10 7 157 7.9E-62 T 19-04-2016 IPR023798 Ribosomal protein S7 domain ALIDE2_RS16775 980c4b5f6da95f2f14a84cdc2e95deef 102 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 102 13.075 T 19-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ALIDE2_RS16775 980c4b5f6da95f2f14a84cdc2e95deef 102 Pfam PF02049 Flagellar hook-basal body complex protein FliE 17 102 3.2E-20 T 19-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ALIDE2_RS16775 980c4b5f6da95f2f14a84cdc2e95deef 102 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 19 102 3.3E-14 T 19-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ALIDE2_RS16775 980c4b5f6da95f2f14a84cdc2e95deef 102 PANTHER PTHR34653 20 102 3.5E-15 T 19-04-2016 ALIDE2_RS16775 980c4b5f6da95f2f14a84cdc2e95deef 102 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 87 100 4.6E-7 T 19-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ALIDE2_RS16775 980c4b5f6da95f2f14a84cdc2e95deef 102 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 66 82 4.6E-7 T 19-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ALIDE2_RS16775 980c4b5f6da95f2f14a84cdc2e95deef 102 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 31 47 4.6E-7 T 19-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ALIDE2_RS04025 e4baa0a8700b3c32ecf86bad675471e4 236 SMART SM01321 9 124 1.1E-44 T 19-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS04025 e4baa0a8700b3c32ecf86bad675471e4 236 PANTHER PTHR34322:SF1 2 154 2.4E-39 T 19-04-2016 ALIDE2_RS04025 e4baa0a8700b3c32ecf86bad675471e4 236 Gene3D G3DSA:3.30.70.1290 10 127 3.4E-15 T 19-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS04025 e4baa0a8700b3c32ecf86bad675471e4 236 SUPERFAMILY SSF143422 3 127 1.28E-32 T 19-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS04025 e4baa0a8700b3c32ecf86bad675471e4 236 Pfam PF01797 Transposase IS200 like 13 122 1.5E-15 T 19-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS04025 e4baa0a8700b3c32ecf86bad675471e4 236 PANTHER PTHR34322 2 154 2.4E-39 T 19-04-2016 ALIDE2_RS02670 ef3e41da123b0a914a205c5c951e45f1 315 Gene3D G3DSA:3.40.190.10 102 190 6.9E-15 T 19-04-2016 ALIDE2_RS02670 ef3e41da123b0a914a205c5c951e45f1 315 Pfam PF03466 LysR substrate binding domain 101 303 5.5E-33 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS02670 ef3e41da123b0a914a205c5c951e45f1 315 PANTHER PTHR30419 8 304 1.4E-52 T 19-04-2016 ALIDE2_RS02670 ef3e41da123b0a914a205c5c951e45f1 315 Gene3D G3DSA:3.40.190.10 191 271 2.1E-16 T 19-04-2016 ALIDE2_RS02670 ef3e41da123b0a914a205c5c951e45f1 315 SUPERFAMILY SSF46785 12 121 6.53E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02670 ef3e41da123b0a914a205c5c951e45f1 315 SUPERFAMILY SSF53850 101 304 5.61E-36 T 19-04-2016 ALIDE2_RS02670 ef3e41da123b0a914a205c5c951e45f1 315 Gene3D G3DSA:1.10.10.10 13 96 7.9E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02670 ef3e41da123b0a914a205c5c951e45f1 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 9.0E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS02670 ef3e41da123b0a914a205c5c951e45f1 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 9.0E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS02670 ef3e41da123b0a914a205c5c951e45f1 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 9.0E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS02670 ef3e41da123b0a914a205c5c951e45f1 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 1.4E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS05475 3abb808c01ed0e00bca3c6b0b3b18c56 390 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 181 367 8.9E-59 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS05475 3abb808c01ed0e00bca3c6b0b3b18c56 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 296 325 1.2E-51 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS05475 3abb808c01ed0e00bca3c6b0b3b18c56 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 248 277 1.2E-51 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS05475 3abb808c01ed0e00bca3c6b0b3b18c56 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 142 171 1.2E-51 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS05475 3abb808c01ed0e00bca3c6b0b3b18c56 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 219 246 1.2E-51 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS05475 3abb808c01ed0e00bca3c6b0b3b18c56 390 SMART SM00283 121 368 7.0E-85 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS05475 3abb808c01ed0e00bca3c6b0b3b18c56 390 PANTHER PTHR32089:SF63 51 371 3.1E-137 T 19-04-2016 ALIDE2_RS05475 3abb808c01ed0e00bca3c6b0b3b18c56 390 SUPERFAMILY SSF58104 88 369 4.19E-70 T 19-04-2016 ALIDE2_RS05475 3abb808c01ed0e00bca3c6b0b3b18c56 390 Pfam PF00672 HAMP domain 48 116 3.5E-7 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS05475 3abb808c01ed0e00bca3c6b0b3b18c56 390 Gene3D G3DSA:1.10.287.950 137 340 9.7E-59 T 19-04-2016 ALIDE2_RS05475 3abb808c01ed0e00bca3c6b0b3b18c56 390 PANTHER PTHR32089 51 371 3.1E-137 T 19-04-2016 ALIDE2_RS05475 3abb808c01ed0e00bca3c6b0b3b18c56 390 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 146 168 - T 19-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site ALIDE2_RS18250 a500a8d1d19ce045e5c36d01397e8634 360 PANTHER PTHR11751:SF398 5 359 5.8E-104 T 19-04-2016 ALIDE2_RS18250 a500a8d1d19ce045e5c36d01397e8634 360 Gene3D G3DSA:3.40.640.10 40 260 8.5E-64 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS18250 a500a8d1d19ce045e5c36d01397e8634 360 Gene3D G3DSA:3.90.1150.10 261 359 1.0E-24 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS18250 a500a8d1d19ce045e5c36d01397e8634 360 PANTHER PTHR11751 5 359 5.8E-104 T 19-04-2016 ALIDE2_RS18250 a500a8d1d19ce045e5c36d01397e8634 360 SUPERFAMILY SSF53383 8 359 2.86E-81 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS18250 a500a8d1d19ce045e5c36d01397e8634 360 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 215 224 - T 19-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 ALIDE2_RS18250 a500a8d1d19ce045e5c36d01397e8634 360 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 358 2.5E-84 T 19-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 ALIDE2_RS18250 a500a8d1d19ce045e5c36d01397e8634 360 Pfam PF00155 Aminotransferase class I and II 28 356 1.5E-56 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ALIDE2_RS18250 a500a8d1d19ce045e5c36d01397e8634 360 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 360 53.969 T 19-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 SUPERFAMILY SSF81442 26 534 2.22E-192 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 PANTHER PTHR10422 15 534 0.0 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 257 311 - T 19-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 Gene3D G3DSA:1.20.210.10 18 538 1.4E-214 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 30 533 8.6E-211 T 19-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 38 479 3.3E-149 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 PANTHER PTHR10422:SF27 15 534 0.0 T 19-04-2016 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 301 316 3.5E-119 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 438 459 3.5E-119 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 76 99 3.5E-119 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 388 407 3.5E-119 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 103 127 3.5E-119 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 175 193 3.5E-119 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 360 378 3.5E-119 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 29 54 3.5E-119 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 146 158 3.5E-119 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 255 276 3.5E-119 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 204 223 3.5E-119 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19600 86ebac0ff8533812f44833cfa7bd5eac 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 325 346 3.5E-119 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 PANTHER PTHR18866 1 556 1.5E-241 T 19-04-2016 ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 Gene3D G3DSA:3.30.470.20 203 446 9.0E-91 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 SUPERFAMILY SSF51246 330 445 6.28E-37 T 19-04-2016 IPR011054 Rudiment single hybrid motif ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 Gene3D G3DSA:3.30.1490.20 129 201 2.5E-23 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 SUPERFAMILY SSF56059 114 322 9.37E-59 T 19-04-2016 ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 4.4E-42 T 19-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 SMART SM00878 334 443 1.1E-57 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 SUPERFAMILY SSF51230 502 573 8.25E-15 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 Pfam PF00364 Biotin-requiring enzyme 511 557 7.8E-12 T 19-04-2016 IPR000089 Biotin/lipoyl attachment ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 533 550 - T 19-04-2016 IPR001882 Biotin-binding site ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 Gene3D G3DSA:2.40.50.100 505 575 7.5E-17 T 19-04-2016 ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 321 3.9E-77 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 Pfam PF02785 Biotin carboxylase C-terminal domain 334 443 1.3E-36 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 Gene3D G3DSA:3.40.50.20 2 128 2.2E-46 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS15780 799a6d16b78a2707a19672d73365958b 576 SUPERFAMILY SSF52440 2 111 6.12E-45 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS10480 85e084da8ef17ccc46652ae8e50e1a72 386 Gene3D G3DSA:1.10.580.10 24 247 1.3E-73 T 19-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 ALIDE2_RS10480 85e084da8ef17ccc46652ae8e50e1a72 386 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 18 385 2.2E-154 T 19-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 ALIDE2_RS10480 85e084da8ef17ccc46652ae8e50e1a72 386 PANTHER PTHR11739:SF4 19 386 1.6E-145 T 19-04-2016 ALIDE2_RS10480 85e084da8ef17ccc46652ae8e50e1a72 386 SUPERFAMILY SSF48256 18 385 9.29E-121 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10480 85e084da8ef17ccc46652ae8e50e1a72 386 ProSitePatterns PS00480 Citrate synthase signature. 268 280 - T 19-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 ALIDE2_RS10480 85e084da8ef17ccc46652ae8e50e1a72 386 Gene3D G3DSA:1.10.230.10 248 332 9.3E-27 T 19-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain ALIDE2_RS10480 85e084da8ef17ccc46652ae8e50e1a72 386 PRINTS PR00143 Citrate synthase signature 136 149 2.3E-34 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10480 85e084da8ef17ccc46652ae8e50e1a72 386 PRINTS PR00143 Citrate synthase signature 186 201 2.3E-34 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10480 85e084da8ef17ccc46652ae8e50e1a72 386 PRINTS PR00143 Citrate synthase signature 338 352 2.3E-34 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10480 85e084da8ef17ccc46652ae8e50e1a72 386 PRINTS PR00143 Citrate synthase signature 261 281 2.3E-34 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10480 85e084da8ef17ccc46652ae8e50e1a72 386 PRINTS PR00143 Citrate synthase signature 318 334 2.3E-34 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10480 85e084da8ef17ccc46652ae8e50e1a72 386 PRINTS PR00143 Citrate synthase signature 208 236 2.3E-34 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10480 85e084da8ef17ccc46652ae8e50e1a72 386 Pfam PF00285 Citrate synthase, C-terminal domain 19 367 2.7E-109 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS10480 85e084da8ef17ccc46652ae8e50e1a72 386 PIRSF PIRSF001369 11 386 2.6E-106 T 19-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 ALIDE2_RS10480 85e084da8ef17ccc46652ae8e50e1a72 386 PANTHER PTHR11739 19 386 1.6E-145 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS15185 7bddc4e7e6410a6640bfea6010700811 257 PANTHER PTHR13966 64 213 8.1E-33 T 19-04-2016 ALIDE2_RS15185 7bddc4e7e6410a6640bfea6010700811 257 SMART SM00892 65 256 2.7E-35 T 19-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 ALIDE2_RS15185 7bddc4e7e6410a6640bfea6010700811 257 SMART SM00477 66 256 3.0E-23 T 19-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 ALIDE2_RS15185 7bddc4e7e6410a6640bfea6010700811 257 Pfam PF01223 DNA/RNA non-specific endonuclease 63 249 9.3E-42 T 19-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 ALIDE2_RS15185 7bddc4e7e6410a6640bfea6010700811 257 SUPERFAMILY SSF54060 42 252 4.83E-59 T 19-04-2016 ALIDE2_RS15185 7bddc4e7e6410a6640bfea6010700811 257 Gene3D G3DSA:3.40.570.10 40 252 1.4E-58 T 19-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 Pfam PF03705 CheR methyltransferase, all-alpha domain 46 96 3.5E-17 T 19-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 Pfam PF01739 CheR methyltransferase, SAM binding domain 112 298 5.3E-54 T 19-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 Gene3D G3DSA:3.40.50.150 111 301 3.3E-66 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 Gene3D G3DSA:1.10.155.10 39 110 2.2E-28 T 19-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 SUPERFAMILY SSF53335 112 301 2.43E-55 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 PIRSF PIRSF000410 30 304 3.6E-91 T 19-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 SMART SM00138 45 304 1.7E-88 T 19-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 PRINTS PR00996 Glutamate methyltransferase family signature 263 286 3.1E-42 T 19-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 PRINTS PR00996 Glutamate methyltransferase family signature 139 159 3.1E-42 T 19-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 PRINTS PR00996 Glutamate methyltransferase family signature 244 258 3.1E-42 T 19-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 PRINTS PR00996 Glutamate methyltransferase family signature 172 188 3.1E-42 T 19-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 PRINTS PR00996 Glutamate methyltransferase family signature 105 117 3.1E-42 T 19-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 PRINTS PR00996 Glutamate methyltransferase family signature 67 80 3.1E-42 T 19-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 PANTHER PTHR24422 39 301 8.1E-109 T 19-04-2016 ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 SUPERFAMILY SSF47757 39 111 3.92E-21 T 19-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ALIDE2_RS20760 8008e7e551689d40d33a615533406137 304 PANTHER PTHR24422:SF13 39 301 8.1E-109 T 19-04-2016 ALIDE2_RS22715 c653a4dc52b29781145cf48207a1d9c3 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS22715 c653a4dc52b29781145cf48207a1d9c3 211 Pfam PF00072 Response regulator receiver domain 9 129 3.0E-21 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS22715 c653a4dc52b29781145cf48207a1d9c3 211 SUPERFAMILY SSF46894 140 209 6.12E-20 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS22715 c653a4dc52b29781145cf48207a1d9c3 211 Gene3D G3DSA:3.40.50.2300 6 153 2.3E-31 T 19-04-2016 ALIDE2_RS22715 c653a4dc52b29781145cf48207a1d9c3 211 PANTHER PTHR26402:SF613 7 208 2.7E-58 T 19-04-2016 ALIDE2_RS22715 c653a4dc52b29781145cf48207a1d9c3 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.8E-12 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS22715 c653a4dc52b29781145cf48207a1d9c3 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.8E-12 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS22715 c653a4dc52b29781145cf48207a1d9c3 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.8E-12 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS22715 c653a4dc52b29781145cf48207a1d9c3 211 SUPERFAMILY SSF52172 5 162 1.21E-29 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS22715 c653a4dc52b29781145cf48207a1d9c3 211 SMART SM00448 7 128 4.6E-25 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS22715 c653a4dc52b29781145cf48207a1d9c3 211 Gene3D G3DSA:1.10.10.10 154 209 6.6E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22715 c653a4dc52b29781145cf48207a1d9c3 211 PANTHER PTHR26402 7 208 2.7E-58 T 19-04-2016 ALIDE2_RS22715 c653a4dc52b29781145cf48207a1d9c3 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 3.2E-21 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS22715 c653a4dc52b29781145cf48207a1d9c3 211 SMART SM00421 152 209 4.4E-22 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS05150 4bf9389f24cf359197df443e7443355d 413 PANTHER PTHR14226 127 176 8.4E-71 T 19-04-2016 ALIDE2_RS05150 4bf9389f24cf359197df443e7443355d 413 PANTHER PTHR14226 194 395 8.4E-71 T 19-04-2016 ALIDE2_RS05150 4bf9389f24cf359197df443e7443355d 413 PANTHER PTHR14226 13 111 8.4E-71 T 19-04-2016 ALIDE2_RS05150 4bf9389f24cf359197df443e7443355d 413 Pfam PF01734 Patatin-like phospholipase 15 240 3.1E-19 T 19-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 ALIDE2_RS05150 4bf9389f24cf359197df443e7443355d 413 PANTHER PTHR14226:SF34 127 176 8.4E-71 T 19-04-2016 ALIDE2_RS05150 4bf9389f24cf359197df443e7443355d 413 PANTHER PTHR14226:SF34 194 395 8.4E-71 T 19-04-2016 ALIDE2_RS05150 4bf9389f24cf359197df443e7443355d 413 PANTHER PTHR14226:SF34 13 111 8.4E-71 T 19-04-2016 ALIDE2_RS05150 4bf9389f24cf359197df443e7443355d 413 Gene3D G3DSA:3.40.1090.10 15 241 5.3E-11 T 19-04-2016 ALIDE2_RS05150 4bf9389f24cf359197df443e7443355d 413 SUPERFAMILY SSF52151 13 265 2.56E-41 T 19-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 ALIDE2_RS04360 f7fe1b9691d1418bd383f9d2f76e3a74 363 PANTHER PTHR30349 77 291 1.4E-39 T 19-04-2016 ALIDE2_RS04360 f7fe1b9691d1418bd383f9d2f76e3a74 363 PANTHER PTHR30349 310 359 1.4E-39 T 19-04-2016 ALIDE2_RS04360 f7fe1b9691d1418bd383f9d2f76e3a74 363 SUPERFAMILY SSF56349 59 360 1.97E-51 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS04360 f7fe1b9691d1418bd383f9d2f76e3a74 363 PANTHER PTHR30349:SF20 77 291 1.4E-39 T 19-04-2016 ALIDE2_RS04360 f7fe1b9691d1418bd383f9d2f76e3a74 363 PANTHER PTHR30349:SF20 310 359 1.4E-39 T 19-04-2016 ALIDE2_RS04360 f7fe1b9691d1418bd383f9d2f76e3a74 363 Gene3D G3DSA:1.10.443.10 164 361 5.2E-38 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS04360 f7fe1b9691d1418bd383f9d2f76e3a74 363 Pfam PF00589 Phage integrase family 197 354 3.7E-25 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS04360 f7fe1b9691d1418bd383f9d2f76e3a74 363 Gene3D G3DSA:1.10.150.130 59 159 4.8E-4 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS13015 35de092e0f817b531038485465b19ef5 414 Pfam PF01266 FAD dependent oxidoreductase 2 398 7.9E-60 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS13015 35de092e0f817b531038485465b19ef5 414 PANTHER PTHR13847:SF148 107 414 1.2E-120 T 19-04-2016 ALIDE2_RS13015 35de092e0f817b531038485465b19ef5 414 PANTHER PTHR13847:SF148 4 63 1.2E-120 T 19-04-2016 ALIDE2_RS13015 35de092e0f817b531038485465b19ef5 414 PANTHER PTHR13847 107 414 1.2E-120 T 19-04-2016 ALIDE2_RS13015 35de092e0f817b531038485465b19ef5 414 PANTHER PTHR13847 4 63 1.2E-120 T 19-04-2016 ALIDE2_RS13015 35de092e0f817b531038485465b19ef5 414 SUPERFAMILY SSF54373 270 360 2.75E-16 T 19-04-2016 ALIDE2_RS13015 35de092e0f817b531038485465b19ef5 414 SUPERFAMILY SSF51905 1 54 5.44E-48 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS13015 35de092e0f817b531038485465b19ef5 414 SUPERFAMILY SSF51905 360 410 5.44E-48 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS13015 35de092e0f817b531038485465b19ef5 414 SUPERFAMILY SSF51905 107 270 5.44E-48 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS13015 35de092e0f817b531038485465b19ef5 414 Gene3D G3DSA:3.50.50.60 108 130 9.9E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS13015 35de092e0f817b531038485465b19ef5 414 Gene3D G3DSA:3.50.50.60 360 411 9.9E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS13015 35de092e0f817b531038485465b19ef5 414 Gene3D G3DSA:3.50.50.60 1 58 9.9E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS13015 35de092e0f817b531038485465b19ef5 414 Gene3D G3DSA:3.50.50.60 191 269 9.9E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS13015 35de092e0f817b531038485465b19ef5 414 Gene3D G3DSA:3.30.9.10 135 190 2.2E-12 T 19-04-2016 ALIDE2_RS13015 35de092e0f817b531038485465b19ef5 414 Gene3D G3DSA:3.30.9.10 270 359 2.2E-12 T 19-04-2016 ALIDE2_RS15145 33ee18fc18acea3e8295a2422bc4fcc7 300 Pfam PF03466 LysR substrate binding domain 95 295 4.0E-38 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS15145 33ee18fc18acea3e8295a2422bc4fcc7 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 9.7E-22 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15145 33ee18fc18acea3e8295a2422bc4fcc7 300 Gene3D G3DSA:1.10.10.10 7 88 4.5E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15145 33ee18fc18acea3e8295a2422bc4fcc7 300 PANTHER PTHR30537:SF15 1 294 4.6E-103 T 19-04-2016 ALIDE2_RS15145 33ee18fc18acea3e8295a2422bc4fcc7 300 SUPERFAMILY SSF46785 7 85 1.02E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15145 33ee18fc18acea3e8295a2422bc4fcc7 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.6E-11 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15145 33ee18fc18acea3e8295a2422bc4fcc7 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.6E-11 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15145 33ee18fc18acea3e8295a2422bc4fcc7 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.6E-11 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15145 33ee18fc18acea3e8295a2422bc4fcc7 300 Gene3D G3DSA:3.40.190.10 98 180 7.4E-29 T 19-04-2016 ALIDE2_RS15145 33ee18fc18acea3e8295a2422bc4fcc7 300 PANTHER PTHR30537 1 294 4.6E-103 T 19-04-2016 ALIDE2_RS15145 33ee18fc18acea3e8295a2422bc4fcc7 300 SUPERFAMILY SSF53850 96 297 5.43E-41 T 19-04-2016 ALIDE2_RS15145 33ee18fc18acea3e8295a2422bc4fcc7 300 Gene3D G3DSA:3.40.190.10 181 264 2.2E-31 T 19-04-2016 ALIDE2_RS06530 0ff325d835d9d4d130586d145abf96d7 312 Pfam PF03466 LysR substrate binding domain 98 305 4.2E-34 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS06530 0ff325d835d9d4d130586d145abf96d7 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 2.8E-17 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06530 0ff325d835d9d4d130586d145abf96d7 312 PANTHER PTHR30419 7 304 9.0E-99 T 19-04-2016 ALIDE2_RS06530 0ff325d835d9d4d130586d145abf96d7 312 PANTHER PTHR30419:SF2 7 304 9.0E-99 T 19-04-2016 ALIDE2_RS06530 0ff325d835d9d4d130586d145abf96d7 312 Gene3D G3DSA:3.40.190.10 191 278 8.4E-20 T 19-04-2016 ALIDE2_RS06530 0ff325d835d9d4d130586d145abf96d7 312 SUPERFAMILY SSF53850 99 309 2.35E-38 T 19-04-2016 ALIDE2_RS06530 0ff325d835d9d4d130586d145abf96d7 312 SUPERFAMILY SSF46785 11 121 1.61E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06530 0ff325d835d9d4d130586d145abf96d7 312 Gene3D G3DSA:3.40.190.10 100 190 1.5E-16 T 19-04-2016 ALIDE2_RS06530 0ff325d835d9d4d130586d145abf96d7 312 Gene3D G3DSA:1.10.10.10 12 98 1.3E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20710 2729fcbe91117bf2e27cf9b473ae7c5e 396 PANTHER PTHR10909 10 394 2.3E-257 T 19-04-2016 ALIDE2_RS20710 2729fcbe91117bf2e27cf9b473ae7c5e 396 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 127 5.0E-40 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS20710 2729fcbe91117bf2e27cf9b473ae7c5e 396 SUPERFAMILY SSF47203 237 392 1.61E-42 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS20710 2729fcbe91117bf2e27cf9b473ae7c5e 396 Gene3D G3DSA:1.10.540.10 6 128 1.1E-46 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS20710 2729fcbe91117bf2e27cf9b473ae7c5e 396 SUPERFAMILY SSF56645 9 251 2.75E-86 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS20710 2729fcbe91117bf2e27cf9b473ae7c5e 396 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 391 1.2E-37 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS20710 2729fcbe91117bf2e27cf9b473ae7c5e 396 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 133 145 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS20710 2729fcbe91117bf2e27cf9b473ae7c5e 396 PANTHER PTHR10909:SF211 10 394 2.3E-257 T 19-04-2016 ALIDE2_RS20710 2729fcbe91117bf2e27cf9b473ae7c5e 396 Gene3D G3DSA:1.20.140.10 227 393 3.1E-59 T 19-04-2016 ALIDE2_RS20710 2729fcbe91117bf2e27cf9b473ae7c5e 396 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 226 2.1E-25 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS20710 2729fcbe91117bf2e27cf9b473ae7c5e 396 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 350 369 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS20710 2729fcbe91117bf2e27cf9b473ae7c5e 396 Gene3D G3DSA:2.40.110.10 130 226 1.3E-39 T 19-04-2016 ALIDE2_RS04330 28dd37b8713833b16f1e34819c0eeb48 68 PANTHER PTHR36150:SF1 5 63 2.1E-18 T 19-04-2016 ALIDE2_RS04330 28dd37b8713833b16f1e34819c0eeb48 68 SUPERFAMILY SSF57716 7 63 4.85E-20 T 19-04-2016 ALIDE2_RS04330 28dd37b8713833b16f1e34819c0eeb48 68 Pfam PF03884 Domain of unknown function (DUF329) 10 60 4.6E-25 T 19-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 ALIDE2_RS04330 28dd37b8713833b16f1e34819c0eeb48 68 PANTHER PTHR36150 5 63 2.1E-18 T 19-04-2016 ALIDE2_RS04330 28dd37b8713833b16f1e34819c0eeb48 68 Gene3D G3DSA:3.30.50.10 6 61 1.9E-23 T 19-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 ALIDE2_RS04330 28dd37b8713833b16f1e34819c0eeb48 68 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 6 60 18.01 T 19-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 ALIDE2_RS07540 5636f4941cec22424c9b30bf661bfb71 479 PANTHER PTHR16943 24 441 1.4E-54 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS07540 5636f4941cec22424c9b30bf661bfb71 479 Pfam PF03972 MmgE/PrpD family 26 441 6.2E-76 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS07540 5636f4941cec22424c9b30bf661bfb71 479 SUPERFAMILY SSF103378 25 448 3.27E-74 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS07540 5636f4941cec22424c9b30bf661bfb71 479 PANTHER PTHR16943:SF8 24 441 1.4E-54 T 19-04-2016 ALIDE2_RS07540 5636f4941cec22424c9b30bf661bfb71 479 Gene3D G3DSA:3.30.1330.120 293 425 9.0E-14 T 19-04-2016 ALIDE2_RS21090 a60eaa9f9cba8ded84df5d068ac7cfec 285 Gene3D G3DSA:3.40.50.10310 13 271 3.9E-71 T 19-04-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 ALIDE2_RS21090 a60eaa9f9cba8ded84df5d068ac7cfec 285 PANTHER PTHR35005:SF1 9 282 5.5E-43 T 19-04-2016 ALIDE2_RS21090 a60eaa9f9cba8ded84df5d068ac7cfec 285 Pfam PF02633 Creatinine amidohydrolase 29 267 1.1E-59 T 19-04-2016 IPR003785 Creatininase/formamide hydrolase KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 ALIDE2_RS21090 a60eaa9f9cba8ded84df5d068ac7cfec 285 PANTHER PTHR35005 9 282 5.5E-43 T 19-04-2016 ALIDE2_RS21090 a60eaa9f9cba8ded84df5d068ac7cfec 285 SUPERFAMILY SSF102215 33 270 9.42E-61 T 19-04-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 ALIDE2_RS06370 700f73770fd11a9d65dd48515a5fa7d1 255 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 9 246 1.0E-89 T 19-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 ALIDE2_RS06370 700f73770fd11a9d65dd48515a5fa7d1 255 PANTHER PTHR30456:SF0 6 253 5.7E-104 T 19-04-2016 ALIDE2_RS06370 700f73770fd11a9d65dd48515a5fa7d1 255 SUPERFAMILY SSF63892 7 248 7.19E-84 T 19-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 ALIDE2_RS06370 700f73770fd11a9d65dd48515a5fa7d1 255 PANTHER PTHR30456 6 253 5.7E-104 T 19-04-2016 ALIDE2_RS06370 700f73770fd11a9d65dd48515a5fa7d1 255 Gene3D G3DSA:3.20.20.70 6 248 8.6E-93 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS06370 700f73770fd11a9d65dd48515a5fa7d1 255 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 9 246 7.6E-68 T 19-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 ALIDE2_RS06370 700f73770fd11a9d65dd48515a5fa7d1 255 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 251 89.224 T 19-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 ALIDE2_RS18860 da3e2d3cfacce53e4192c59e57ddcd44 422 PANTHER PTHR33525:SF4 22 382 3.6E-63 T 19-04-2016 ALIDE2_RS18860 da3e2d3cfacce53e4192c59e57ddcd44 422 Pfam PF08668 HDOD domain 228 339 2.4E-11 T 19-04-2016 IPR013976 Metal-dependent hydrolase HDOD ALIDE2_RS18860 da3e2d3cfacce53e4192c59e57ddcd44 422 PIRSF PIRSF003180 20 421 1.3E-92 T 19-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing ALIDE2_RS18860 da3e2d3cfacce53e4192c59e57ddcd44 422 SUPERFAMILY SSF141868 23 215 1.83E-23 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS18860 da3e2d3cfacce53e4192c59e57ddcd44 422 SMART SM00052 12 215 7.2E-5 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS18860 da3e2d3cfacce53e4192c59e57ddcd44 422 SUPERFAMILY SSF109604 201 419 3.11E-37 T 19-04-2016 ALIDE2_RS18860 da3e2d3cfacce53e4192c59e57ddcd44 422 Pfam PF00563 EAL domain 94 210 4.1E-10 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS18860 da3e2d3cfacce53e4192c59e57ddcd44 422 PANTHER PTHR33525 22 382 3.6E-63 T 19-04-2016 ALIDE2_RS18860 da3e2d3cfacce53e4192c59e57ddcd44 422 Gene3D G3DSA:1.10.3150.10 204 419 3.7E-31 T 19-04-2016 IPR013976 Metal-dependent hydrolase HDOD ALIDE2_RS18860 da3e2d3cfacce53e4192c59e57ddcd44 422 Gene3D G3DSA:3.20.20.450 95 203 5.3E-11 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS09930 0ac5274744a0a270a32dbadc4cba828c 286 PANTHER PTHR30024:SF17 1 249 1.7E-31 T 19-04-2016 ALIDE2_RS09930 0ac5274744a0a270a32dbadc4cba828c 286 Gene3D G3DSA:3.40.190.10 117 242 3.7E-12 T 19-04-2016 ALIDE2_RS09930 0ac5274744a0a270a32dbadc4cba828c 286 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 34 269 1.8E-71 T 19-04-2016 ALIDE2_RS09930 0ac5274744a0a270a32dbadc4cba828c 286 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 247 3.4E-77 T 19-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 ALIDE2_RS09930 0ac5274744a0a270a32dbadc4cba828c 286 PANTHER PTHR30024 1 249 1.7E-31 T 19-04-2016 ALIDE2_RS09930 0ac5274744a0a270a32dbadc4cba828c 286 SUPERFAMILY SSF53850 51 238 7.59E-41 T 19-04-2016 ALIDE2_RS09930 0ac5274744a0a270a32dbadc4cba828c 286 Gene3D G3DSA:3.40.190.10 49 100 9.8E-5 T 19-04-2016 ALIDE2_RS00180 12dc95c2c0fa5b71d941e47cbafc072a 254 Pfam PF09339 IclR helix-turn-helix domain 12 64 4.5E-15 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS00180 12dc95c2c0fa5b71d941e47cbafc072a 254 Pfam PF01614 Bacterial transcriptional regulator 134 242 1.0E-6 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS00180 12dc95c2c0fa5b71d941e47cbafc072a 254 SUPERFAMILY SSF55781 77 244 1.77E-32 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00180 12dc95c2c0fa5b71d941e47cbafc072a 254 Gene3D G3DSA:3.30.450.40 80 244 1.3E-31 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00180 12dc95c2c0fa5b71d941e47cbafc072a 254 PANTHER PTHR30136 7 247 5.5E-42 T 19-04-2016 ALIDE2_RS00180 12dc95c2c0fa5b71d941e47cbafc072a 254 SUPERFAMILY SSF46785 11 85 3.69E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00180 12dc95c2c0fa5b71d941e47cbafc072a 254 SMART SM00346 10 101 1.8E-21 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS00180 12dc95c2c0fa5b71d941e47cbafc072a 254 Gene3D G3DSA:1.10.10.10 4 79 7.0E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02500 c007f321fca78de49499015291a7831b 309 PANTHER PTHR11795 1 309 2.3E-60 T 19-04-2016 ALIDE2_RS02500 c007f321fca78de49499015291a7831b 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 289 1.0E-26 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS02500 c007f321fca78de49499015291a7831b 309 PANTHER PTHR11795:SF398 1 309 2.3E-60 T 19-04-2016 ALIDE2_RS10105 b634bf813db433075d97819295eeb682 125 Pfam PF02924 Bacteriophage lambda head decoration protein D 4 119 4.0E-41 T 19-04-2016 IPR004195 Head decoration protein D GO:0019028 ALIDE2_RS10105 b634bf813db433075d97819295eeb682 125 Gene3D G3DSA:2.40.300.10 25 111 6.1E-6 T 19-04-2016 IPR004195 Head decoration protein D GO:0019028 ALIDE2_RS03450 cee9e2fc874f0c0f66b6c5521e8f7296 366 PRINTS PR00364 Disease resistance protein signature 45 60 1.0E-4 T 19-04-2016 ALIDE2_RS03450 cee9e2fc874f0c0f66b6c5521e8f7296 366 PRINTS PR00364 Disease resistance protein signature 119 133 1.0E-4 T 19-04-2016 ALIDE2_RS03450 cee9e2fc874f0c0f66b6c5521e8f7296 366 PRINTS PR00364 Disease resistance protein signature 228 242 1.0E-4 T 19-04-2016 ALIDE2_RS03450 cee9e2fc874f0c0f66b6c5521e8f7296 366 SMART SM00382 42 208 7.4E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS03450 cee9e2fc874f0c0f66b6c5521e8f7296 366 Pfam PF13401 AAA domain 43 171 6.3E-20 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS03450 cee9e2fc874f0c0f66b6c5521e8f7296 366 Gene3D G3DSA:3.40.50.300 44 167 2.4E-12 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03450 cee9e2fc874f0c0f66b6c5521e8f7296 366 SUPERFAMILY SSF52540 5 265 4.85E-31 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03450 cee9e2fc874f0c0f66b6c5521e8f7296 366 PANTHER PTHR35894 2 269 1.6E-76 T 19-04-2016 ALIDE2_RS03450 cee9e2fc874f0c0f66b6c5521e8f7296 366 PANTHER PTHR35894:SF1 2 269 1.6E-76 T 19-04-2016 ALIDE2_RS03450 cee9e2fc874f0c0f66b6c5521e8f7296 366 TIGRFAM TIGR03015 pepcterm_ATPase: putative secretion ATPase, PEP-CTERM locus subfamily 1 269 1.4E-121 T 19-04-2016 IPR017466 ATPase, secretion system, PEP-CTERM, predicted ALIDE2_RS21650 f3411d1abc39a0e670e927bf6bf93267 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.9E-55 T 19-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS21650 f3411d1abc39a0e670e927bf6bf93267 122 SUPERFAMILY SSF50193 1 122 1.44E-49 T 19-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21650 f3411d1abc39a0e670e927bf6bf93267 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.4E-52 T 19-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21650 f3411d1abc39a0e670e927bf6bf93267 122 PANTHER PTHR11761:SF3 1 122 1.2E-69 T 19-04-2016 ALIDE2_RS21650 f3411d1abc39a0e670e927bf6bf93267 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.429 T 19-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21650 f3411d1abc39a0e670e927bf6bf93267 122 SMART SM01374 1 122 8.8E-82 T 19-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21650 f3411d1abc39a0e670e927bf6bf93267 122 Gene3D G3DSA:2.40.150.20 1 122 1.5E-52 T 19-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21650 f3411d1abc39a0e670e927bf6bf93267 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 19-04-2016 IPR019972 Ribosomal protein L14P, conserved site ALIDE2_RS21650 f3411d1abc39a0e670e927bf6bf93267 122 PANTHER PTHR11761 1 122 1.2E-69 T 19-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS19000 c335f87f68ca64f4b5f6f62532f2f41c 384 Pfam PF13719 zinc-ribbon domain 4 39 8.3E-15 T 19-04-2016 IPR011723 Zinc finger/thioredoxin putative ALIDE2_RS19000 c335f87f68ca64f4b5f6f62532f2f41c 384 Pfam PF11906 Protein of unknown function (DUF3426) 239 380 4.9E-35 T 19-04-2016 IPR021834 Protein of unknown function DUF3426 ALIDE2_RS19000 c335f87f68ca64f4b5f6f62532f2f41c 384 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 4 39 4.0E-12 T 19-04-2016 IPR011723 Zinc finger/thioredoxin putative ALIDE2_RS11860 f54df6cb6664dc756c4c93fa2a14f8e9 286 PANTHER PTHR24421:SF10 24 286 1.6E-24 T 19-04-2016 ALIDE2_RS11860 f54df6cb6664dc756c4c93fa2a14f8e9 286 SMART SM00387 187 286 2.5E-6 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS11860 f54df6cb6664dc756c4c93fa2a14f8e9 286 Pfam PF07730 Histidine kinase 91 118 1.1E-4 T 19-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ALIDE2_RS11860 f54df6cb6664dc756c4c93fa2a14f8e9 286 PANTHER PTHR24421 24 286 1.6E-24 T 19-04-2016 ALIDE2_RS11860 f54df6cb6664dc756c4c93fa2a14f8e9 286 Gene3D G3DSA:3.30.565.10 151 285 4.1E-9 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS11860 f54df6cb6664dc756c4c93fa2a14f8e9 286 SUPERFAMILY SSF55874 150 284 6.02E-14 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS11860 f54df6cb6664dc756c4c93fa2a14f8e9 286 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 190 284 5.6E-5 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS07700 22bef6c3e2fda5fdbcc5ebc9a521b4f6 269 PANTHER PTHR11941:SF15 1 262 6.4E-102 T 19-04-2016 ALIDE2_RS07700 22bef6c3e2fda5fdbcc5ebc9a521b4f6 269 SUPERFAMILY SSF52096 13 262 6.79E-69 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS07700 22bef6c3e2fda5fdbcc5ebc9a521b4f6 269 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 107 127 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS07700 22bef6c3e2fda5fdbcc5ebc9a521b4f6 269 Gene3D G3DSA:3.90.226.10 2 258 8.4E-66 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS07700 22bef6c3e2fda5fdbcc5ebc9a521b4f6 269 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 262 4.4E-46 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS07700 22bef6c3e2fda5fdbcc5ebc9a521b4f6 269 PANTHER PTHR11941 1 262 6.4E-102 T 19-04-2016 ALIDE2_RS05165 01f2f3cb8b7e56d953f85af58fb4bf62 353 Hamap MF_00625 Selenide, water dikinase [selD]. 9 353 43.052 T 19-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 ALIDE2_RS05165 01f2f3cb8b7e56d953f85af58fb4bf62 353 Gene3D G3DSA:3.90.650.10 170 348 2.4E-17 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain ALIDE2_RS05165 01f2f3cb8b7e56d953f85af58fb4bf62 353 Gene3D G3DSA:3.30.1330.10 43 167 2.2E-32 T 19-04-2016 IPR016188 PurM-like, N-terminal domain ALIDE2_RS05165 01f2f3cb8b7e56d953f85af58fb4bf62 353 Pfam PF02769 AIR synthase related protein, C-terminal domain 174 347 1.8E-28 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain ALIDE2_RS05165 01f2f3cb8b7e56d953f85af58fb4bf62 353 PANTHER PTHR10256 11 346 4.3E-117 T 19-04-2016 ALIDE2_RS05165 01f2f3cb8b7e56d953f85af58fb4bf62 353 PIRSF PIRSF036407 6 351 3.5E-113 T 19-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 ALIDE2_RS05165 01f2f3cb8b7e56d953f85af58fb4bf62 353 SUPERFAMILY SSF56042 169 347 1.23E-45 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain ALIDE2_RS05165 01f2f3cb8b7e56d953f85af58fb4bf62 353 TIGRFAM TIGR00476 selD: selenide, water dikinase 11 319 2.8E-128 T 19-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 ALIDE2_RS05165 01f2f3cb8b7e56d953f85af58fb4bf62 353 SUPERFAMILY SSF55326 11 166 3.53E-42 T 19-04-2016 ALIDE2_RS05165 01f2f3cb8b7e56d953f85af58fb4bf62 353 Pfam PF00586 AIR synthase related protein, N-terminal domain 55 162 3.9E-21 T 19-04-2016 IPR016188 PurM-like, N-terminal domain ALIDE2_RS21160 c37be31a32ef17d4d1e24a8706ad0029 292 PANTHER PTHR11795 1 292 4.8E-84 T 19-04-2016 ALIDE2_RS21160 c37be31a32ef17d4d1e24a8706ad0029 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 276 2.0E-35 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS21160 c37be31a32ef17d4d1e24a8706ad0029 292 PANTHER PTHR11795:SF398 1 292 4.8E-84 T 19-04-2016 ALIDE2_RS09410 7c8c8dfea212d095d30b702ba8d92888 134 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 2.3E-39 T 19-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 ALIDE2_RS09410 7c8c8dfea212d095d30b702ba8d92888 134 Gene3D G3DSA:3.40.30.10 1 132 5.7E-52 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS09410 7c8c8dfea212d095d30b702ba8d92888 134 PANTHER PTHR30041:SF0 1 133 8.7E-42 T 19-04-2016 ALIDE2_RS09410 7c8c8dfea212d095d30b702ba8d92888 134 SUPERFAMILY SSF52833 4 129 2.24E-36 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS09410 7c8c8dfea212d095d30b702ba8d92888 134 Pfam PF03960 ArsC family 7 112 3.8E-16 T 19-04-2016 IPR006660 Arsenate reductase-like ALIDE2_RS09410 7c8c8dfea212d095d30b702ba8d92888 134 PANTHER PTHR30041 1 133 8.7E-42 T 19-04-2016 ALIDE2_RS04060 cabc456d7d6594de9c93a5ea21d553f7 319 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 11 290 32.562 T 19-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 ALIDE2_RS04060 cabc456d7d6594de9c93a5ea21d553f7 319 PANTHER PTHR11558 31 289 1.5E-84 T 19-04-2016 ALIDE2_RS04060 cabc456d7d6594de9c93a5ea21d553f7 319 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 87 100 - T 19-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 ALIDE2_RS04060 cabc456d7d6594de9c93a5ea21d553f7 319 Pfam PF01564 Spermine/spermidine synthase 29 242 1.1E-51 T 19-04-2016 ALIDE2_RS04060 cabc456d7d6594de9c93a5ea21d553f7 319 SUPERFAMILY SSF53335 11 289 4.47E-76 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS04060 cabc456d7d6594de9c93a5ea21d553f7 319 Gene3D G3DSA:2.30.140.10 12 62 6.1E-13 T 19-04-2016 ALIDE2_RS04060 cabc456d7d6594de9c93a5ea21d553f7 319 Gene3D G3DSA:3.40.50.150 63 297 4.4E-71 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS10445 5b9c2a4da90d859fab323955b7ece7a5 308 SUPERFAMILY SSF53850 93 297 2.65E-36 T 19-04-2016 ALIDE2_RS10445 5b9c2a4da90d859fab323955b7ece7a5 308 PANTHER PTHR30126 6 306 8.7E-129 T 19-04-2016 ALIDE2_RS10445 5b9c2a4da90d859fab323955b7ece7a5 308 PANTHER PTHR30126:SF25 6 306 8.7E-129 T 19-04-2016 ALIDE2_RS10445 5b9c2a4da90d859fab323955b7ece7a5 308 SUPERFAMILY SSF46785 5 116 3.57E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS10445 5b9c2a4da90d859fab323955b7ece7a5 308 Gene3D G3DSA:1.10.10.10 7 92 6.9E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS10445 5b9c2a4da90d859fab323955b7ece7a5 308 Gene3D G3DSA:3.40.190.10 186 265 1.5E-13 T 19-04-2016 ALIDE2_RS10445 5b9c2a4da90d859fab323955b7ece7a5 308 Pfam PF03466 LysR substrate binding domain 91 296 1.1E-36 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS10445 5b9c2a4da90d859fab323955b7ece7a5 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 57 2.0E-16 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS10445 5b9c2a4da90d859fab323955b7ece7a5 308 Gene3D G3DSA:3.40.190.10 96 185 1.3E-11 T 19-04-2016 ALIDE2_RS10445 5b9c2a4da90d859fab323955b7ece7a5 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS10445 5b9c2a4da90d859fab323955b7ece7a5 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS10445 5b9c2a4da90d859fab323955b7ece7a5 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 SMART SM00387 624 735 1.6E-26 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 719 732 1.8E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 675 1.8E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 695 713 1.8E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 689 1.8E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 Pfam PF12860 PAS fold 368 481 5.7E-41 T 19-04-2016 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 Pfam PF02743 Cache domain 39 211 2.5E-13 T 19-04-2016 IPR033479 Double Cache domain 1 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 Gene3D G3DSA:3.30.450.20 355 475 8.2E-13 T 19-04-2016 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 Gene3D G3DSA:3.30.565.10 581 736 9.4E-36 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 Gene3D G3DSA:3.30.450.20 93 181 4.1E-7 T 19-04-2016 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 SMART SM00448 760 873 2.2E-10 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 PANTHER PTHR24423 45 61 1.0E-151 T 19-04-2016 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 PANTHER PTHR24423 511 884 1.0E-151 T 19-04-2016 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 PANTHER PTHR24423 360 492 1.0E-151 T 19-04-2016 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 Pfam PF00512 His Kinase A (phospho-acceptor) domain 516 580 3.1E-8 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 Gene3D G3DSA:3.40.50.2300 762 883 5.1E-16 T 19-04-2016 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 Gene3D G3DSA:1.10.287.130 507 576 3.6E-8 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 SUPERFAMILY SSF103190 57 190 3.92E-12 T 19-04-2016 IPR029151 Periplasmic sensor domain-like ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 624 733 8.1E-19 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 SUPERFAMILY SSF52172 760 880 7.26E-17 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 SMART SM00388 515 580 5.1E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 SUPERFAMILY SSF47384 501 582 1.67E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 SUPERFAMILY SSF55785 355 475 3.62E-7 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 Pfam PF00072 Response regulator receiver domain 764 871 4.5E-10 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 SUPERFAMILY SSF55874 570 733 5.63E-35 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 PANTHER PTHR24423:SF479 45 61 1.0E-151 T 19-04-2016 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 PANTHER PTHR24423:SF479 511 884 1.0E-151 T 19-04-2016 ALIDE2_RS22015 0a10e09abbe9a91fe1c4b61a611b2eba 886 PANTHER PTHR24423:SF479 360 492 1.0E-151 T 19-04-2016 ALIDE2_RS01470 06638b85909e49ee1b69163bc48c3a7f 291 SUPERFAMILY SSF51556 23 291 3.61E-67 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS01470 06638b85909e49ee1b69163bc48c3a7f 291 PANTHER PTHR35563 10 291 1.7E-63 T 19-04-2016 ALIDE2_RS01470 06638b85909e49ee1b69163bc48c3a7f 291 PANTHER PTHR35563:SF1 10 291 1.7E-63 T 19-04-2016 ALIDE2_RS01470 06638b85909e49ee1b69163bc48c3a7f 291 Gene3D G3DSA:3.20.20.140 11 291 1.4E-89 T 19-04-2016 ALIDE2_RS01470 06638b85909e49ee1b69163bc48c3a7f 291 Pfam PF04909 Amidohydrolase 28 291 6.0E-36 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 ALIDE2_RS19585 ac8865adcf41f18f36071c950f9694f8 245 Gene3D G3DSA:3.40.50.2020 70 245 6.6E-37 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS19585 ac8865adcf41f18f36071c950f9694f8 245 PANTHER PTHR11907:SF9 27 245 6.3E-52 T 19-04-2016 ALIDE2_RS19585 ac8865adcf41f18f36071c950f9694f8 245 SUPERFAMILY SSF53271 69 243 1.97E-31 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS19585 ac8865adcf41f18f36071c950f9694f8 245 PANTHER PTHR11907 27 245 6.3E-52 T 19-04-2016 ALIDE2_RS19585 ac8865adcf41f18f36071c950f9694f8 245 Pfam PF00156 Phosphoribosyl transferase domain 198 243 3.6E-9 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 ALIDE2_RS16230 74ecb9df59053ab0efbde8b28a4a10d3 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 321 2.3E-26 T 19-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS16230 74ecb9df59053ab0efbde8b28a4a10d3 326 SUPERFAMILY SSF52283 4 136 1.34E-34 T 19-04-2016 ALIDE2_RS16230 74ecb9df59053ab0efbde8b28a4a10d3 326 SUPERFAMILY SSF51735 102 290 3.82E-59 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS16230 74ecb9df59053ab0efbde8b28a4a10d3 326 Gene3D G3DSA:3.40.50.720 4 116 6.7E-35 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS16230 74ecb9df59053ab0efbde8b28a4a10d3 326 Gene3D G3DSA:3.40.50.720 117 292 9.5E-63 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS16230 74ecb9df59053ab0efbde8b28a4a10d3 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 289 2.3E-58 T 19-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ALIDE2_RS16230 74ecb9df59053ab0efbde8b28a4a10d3 326 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 150 178 - T 19-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ALIDE2_RS16230 74ecb9df59053ab0efbde8b28a4a10d3 326 PANTHER PTHR10996 4 324 3.8E-125 T 19-04-2016 ALIDE2_RS17130 7ea074e91c062364c9eecd51c8ce71df 414 PANTHER PTHR30349:SF20 137 218 3.6E-52 T 19-04-2016 ALIDE2_RS17130 7ea074e91c062364c9eecd51c8ce71df 414 PANTHER PTHR30349:SF20 248 413 3.6E-52 T 19-04-2016 ALIDE2_RS17130 7ea074e91c062364c9eecd51c8ce71df 414 SUPERFAMILY SSF56349 101 226 1.68E-56 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS17130 7ea074e91c062364c9eecd51c8ce71df 414 SUPERFAMILY SSF56349 256 407 1.68E-56 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS17130 7ea074e91c062364c9eecd51c8ce71df 414 Gene3D G3DSA:1.10.443.10 203 410 6.0E-44 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS17130 7ea074e91c062364c9eecd51c8ce71df 414 Pfam PF00589 Phage integrase family 257 399 1.8E-33 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS17130 7ea074e91c062364c9eecd51c8ce71df 414 Pfam PF13356 Domain of unknown function (DUF4102) 6 92 9.0E-17 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 ALIDE2_RS17130 7ea074e91c062364c9eecd51c8ce71df 414 Gene3D G3DSA:1.10.150.130 101 198 1.6E-7 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS17130 7ea074e91c062364c9eecd51c8ce71df 414 PANTHER PTHR30349 137 218 3.6E-52 T 19-04-2016 ALIDE2_RS17130 7ea074e91c062364c9eecd51c8ce71df 414 PANTHER PTHR30349 248 413 3.6E-52 T 19-04-2016 ALIDE2_RS22555 277d163cec8167600f712cde294a6488 660 Pfam PF00501 AMP-binding enzyme 104 534 1.2E-73 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS22555 277d163cec8167600f712cde294a6488 660 Gene3D G3DSA:3.40.50.980 283 439 2.1E-26 T 19-04-2016 ALIDE2_RS22555 277d163cec8167600f712cde294a6488 660 Gene3D G3DSA:3.40.50.980 105 282 5.8E-35 T 19-04-2016 ALIDE2_RS22555 277d163cec8167600f712cde294a6488 660 ProSitePatterns PS00455 Putative AMP-binding domain signature. 276 287 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS22555 277d163cec8167600f712cde294a6488 660 PANTHER PTHR24095 13 657 1.5E-225 T 19-04-2016 ALIDE2_RS22555 277d163cec8167600f712cde294a6488 660 PANTHER PTHR24095:SF184 13 657 1.5E-225 T 19-04-2016 ALIDE2_RS22555 277d163cec8167600f712cde294a6488 660 Pfam PF13193 AMP-binding enzyme C-terminal domain 543 620 2.2E-15 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS22555 277d163cec8167600f712cde294a6488 660 Gene3D G3DSA:2.30.38.10 452 528 1.0E-8 T 19-04-2016 ALIDE2_RS22555 277d163cec8167600f712cde294a6488 660 SUPERFAMILY SSF56801 31 652 9.16E-155 T 19-04-2016 ALIDE2_RS22555 277d163cec8167600f712cde294a6488 660 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 40 95 6.1E-7 T 19-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 ALIDE2_RS22555 277d163cec8167600f712cde294a6488 660 Gene3D G3DSA:3.30.300.30 529 629 5.2E-19 T 19-04-2016 ALIDE2_RS13575 53c825594b55bc7fdfde3fc307ac1898 301 PANTHER PTHR30373 15 301 2.3E-67 T 19-04-2016 ALIDE2_RS13575 53c825594b55bc7fdfde3fc307ac1898 301 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 48 171 1.2E-34 T 19-04-2016 IPR007621 TPM domain ALIDE2_RS13575 53c825594b55bc7fdfde3fc307ac1898 301 PANTHER PTHR30373:SF2 15 301 2.3E-67 T 19-04-2016 ALIDE2_RS13295 f00a048e4f4f428a11396745b8a82c36 346 SUPERFAMILY SSF53850 29 336 3.67E-100 T 19-04-2016 ALIDE2_RS13295 f00a048e4f4f428a11396745b8a82c36 346 PANTHER PTHR30570:SF0 6 336 4.2E-133 T 19-04-2016 ALIDE2_RS13295 f00a048e4f4f428a11396745b8a82c36 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 6.3E-128 T 19-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 ALIDE2_RS13295 f00a048e4f4f428a11396745b8a82c36 346 PIRSF PIRSF002756 3 338 1.3E-108 T 19-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 ALIDE2_RS13295 f00a048e4f4f428a11396745b8a82c36 346 PANTHER PTHR30570 6 336 4.2E-133 T 19-04-2016 ALIDE2_RS13295 f00a048e4f4f428a11396745b8a82c36 346 Pfam PF12849 PBP superfamily domain 22 306 8.6E-65 T 19-04-2016 IPR024370 PBP domain ALIDE2_RS13295 f00a048e4f4f428a11396745b8a82c36 346 Gene3D G3DSA:3.40.190.10 180 333 1.4E-31 T 19-04-2016 ALIDE2_RS13295 f00a048e4f4f428a11396745b8a82c36 346 Gene3D G3DSA:3.40.190.10 26 176 1.1E-55 T 19-04-2016 ALIDE2_RS03755 7229a8e6e9b221c34fe2cd68b0a6cd8b 121 PANTHER PTHR38779 3 114 8.3E-14 T 19-04-2016 ALIDE2_RS03755 7229a8e6e9b221c34fe2cd68b0a6cd8b 121 Pfam PF13633 Prokaryotic N-terminal methylation site 8 32 7.1E-10 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03755 7229a8e6e9b221c34fe2cd68b0a6cd8b 121 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03755 7229a8e6e9b221c34fe2cd68b0a6cd8b 121 SUPERFAMILY SSF54523 10 51 1.26E-5 T 19-04-2016 ALIDE2_RS03755 7229a8e6e9b221c34fe2cd68b0a6cd8b 121 Pfam PF02501 Type II secretion system (T2SS), protein I 45 119 4.2E-22 T 19-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 ALIDE2_RS03755 7229a8e6e9b221c34fe2cd68b0a6cd8b 121 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 4.6E-8 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03755 7229a8e6e9b221c34fe2cd68b0a6cd8b 121 TIGRFAM TIGR01707 gspI: type II secretion system protein I 9 105 3.9E-16 T 19-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 ALIDE2_RS03755 7229a8e6e9b221c34fe2cd68b0a6cd8b 121 SUPERFAMILY SSF54523 45 116 2.28E-12 T 19-04-2016 ALIDE2_RS03755 7229a8e6e9b221c34fe2cd68b0a6cd8b 121 Gene3D G3DSA:3.30.1300.30 38 114 2.2E-10 T 19-04-2016 ALIDE2_RS05205 4758e4821c0d8e3cd93e23f423efb798 271 SMART SM00345 27 86 1.7E-20 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05205 4758e4821c0d8e3cd93e23f423efb798 271 Gene3D G3DSA:1.10.10.10 19 90 6.0E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05205 4758e4821c0d8e3cd93e23f423efb798 271 Gene3D G3DSA:3.40.1410.10 111 255 5.0E-27 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ALIDE2_RS05205 4758e4821c0d8e3cd93e23f423efb798 271 SMART SM00866 107 253 2.2E-13 T 19-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ALIDE2_RS05205 4758e4821c0d8e3cd93e23f423efb798 271 SUPERFAMILY SSF64288 74 260 3.71E-26 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ALIDE2_RS05205 4758e4821c0d8e3cd93e23f423efb798 271 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 86 1.2E-20 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05205 4758e4821c0d8e3cd93e23f423efb798 271 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 3.2E-9 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05205 4758e4821c0d8e3cd93e23f423efb798 271 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 3.2E-9 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05205 4758e4821c0d8e3cd93e23f423efb798 271 Pfam PF07702 UTRA domain 118 252 8.6E-17 T 19-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ALIDE2_RS05205 4758e4821c0d8e3cd93e23f423efb798 271 PANTHER PTHR11751 220 243 3.1E-19 T 19-04-2016 ALIDE2_RS05205 4758e4821c0d8e3cd93e23f423efb798 271 PANTHER PTHR11751 24 89 3.1E-19 T 19-04-2016 ALIDE2_RS05205 4758e4821c0d8e3cd93e23f423efb798 271 SUPERFAMILY SSF46785 18 90 1.48E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS03720 924c63efb45e2b7a8b6cf6f6c47383bd 466 Gene3D G3DSA:3.30.450.90 84 212 2.6E-52 T 19-04-2016 ALIDE2_RS03720 924c63efb45e2b7a8b6cf6f6c47383bd 466 Pfam PF00437 Type II/IV secretion system protein 115 379 9.4E-86 T 19-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ALIDE2_RS03720 924c63efb45e2b7a8b6cf6f6c47383bd 466 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 307 321 - T 19-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ALIDE2_RS03720 924c63efb45e2b7a8b6cf6f6c47383bd 466 SUPERFAMILY SSF160246 3 65 7.32E-10 T 19-04-2016 ALIDE2_RS03720 924c63efb45e2b7a8b6cf6f6c47383bd 466 Gene3D G3DSA:3.40.50.300 218 464 1.4E-93 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03720 924c63efb45e2b7a8b6cf6f6c47383bd 466 PANTHER PTHR30258 5 466 6.4E-205 T 19-04-2016 ALIDE2_RS03720 924c63efb45e2b7a8b6cf6f6c47383bd 466 SMART SM00382 240 363 1.8E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS03720 924c63efb45e2b7a8b6cf6f6c47383bd 466 SUPERFAMILY SSF52540 89 464 8.3E-102 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03720 924c63efb45e2b7a8b6cf6f6c47383bd 466 PANTHER PTHR30258:SF9 5 466 6.4E-205 T 19-04-2016 ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 SUPERFAMILY SSF50494 74 289 2.45E-64 T 19-04-2016 IPR009003 Peptidase S1, PA clan ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 Gene3D G3DSA:2.40.10.10 66 182 6.5E-32 T 19-04-2016 ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 SUPERFAMILY SSF50156 250 370 1.58E-20 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 PANTHER PTHR22939:SF93 74 382 8.4E-112 T 19-04-2016 ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 PRINTS PR00834 HtrA/DegQ protease family signature 189 213 5.1E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 PRINTS PR00834 HtrA/DegQ protease family signature 246 263 5.1E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 PRINTS PR00834 HtrA/DegQ protease family signature 327 339 5.1E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 PRINTS PR00834 HtrA/DegQ protease family signature 128 140 5.1E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 PRINTS PR00834 HtrA/DegQ protease family signature 149 169 5.1E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 PRINTS PR00834 HtrA/DegQ protease family signature 224 241 5.1E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 Pfam PF13365 Trypsin-like peptidase domain 119 253 1.4E-32 T 19-04-2016 ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 Gene3D G3DSA:2.30.42.10 295 384 7.2E-18 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 Gene3D G3DSA:2.40.10.10 183 294 1.8E-43 T 19-04-2016 ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 SMART SM00228 292 369 1.8E-8 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 PANTHER PTHR22939 74 382 8.4E-112 T 19-04-2016 ALIDE2_RS16730 2028deec72c33338c34c03f9032b8a61 387 Pfam PF13180 PDZ domain 293 378 6.0E-13 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 PANTHER PTHR24322 164 195 5.1E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 PANTHER PTHR24322 18 148 5.1E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 2.7E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 2.7E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 2.7E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 PANTHER PTHR24322:SF328 164 195 5.1E-42 T 19-04-2016 ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 PANTHER PTHR24322:SF328 18 148 5.1E-42 T 19-04-2016 ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 Gene3D G3DSA:3.40.50.720 8 268 2.0E-75 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 SUPERFAMILY SSF51735 13 267 2.81E-68 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 1.9E-40 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 230 250 1.9E-40 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.9E-40 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 1.9E-40 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.9E-40 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 1.9E-40 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 189 3.1E-4 T 19-04-2016 ALIDE2_RS05735 25693249b10ebedc5a4dd79578d6080f 269 Pfam PF00106 short chain dehydrogenase 15 202 3.7E-50 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 30 642 1.7E-251 T 19-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 Gene3D G3DSA:1.20.1580.10 769 899 1.4E-49 T 19-04-2016 ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 Hamap MF_00205 UvrABC system protein A [uvrA]. 27 1019 21.849 T 19-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 Pfam PF00005 ABC transporter 699 939 1.9E-8 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 SUPERFAMILY SSF52540 30 230 4.36E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 SUPERFAMILY SSF52540 466 605 4.36E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 PANTHER PTHR32282 689 1022 0.0 T 19-04-2016 ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 PANTHER PTHR32282 27 648 0.0 T 19-04-2016 ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 Gene3D G3DSA:1.20.1580.10 279 312 4.0E-50 T 19-04-2016 ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 Gene3D G3DSA:1.20.1580.10 117 155 4.0E-50 T 19-04-2016 ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 Gene3D G3DSA:1.20.1580.10 439 513 4.0E-50 T 19-04-2016 ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 SUPERFAMILY SSF52540 697 993 7.02E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 PANTHER PTHR32282:SF2 689 1022 0.0 T 19-04-2016 ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 PANTHER PTHR32282:SF2 27 648 0.0 T 19-04-2016 ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 ProSitePatterns PS00211 ABC transporters family signature. 909 923 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 ProSitePatterns PS00211 ABC transporters family signature. 523 537 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 Gene3D G3DSA:3.30.1490.20 156 179 2.6E-26 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 Gene3D G3DSA:3.30.1490.20 226 277 2.6E-26 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 Gene3D G3DSA:3.40.50.300 514 631 3.2E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 Gene3D G3DSA:3.40.50.300 900 1020 4.8E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 Gene3D G3DSA:3.40.50.300 29 115 3.2E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 Gene3D G3DSA:3.40.50.300 686 767 4.8E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22930 6b8ec3a1b84975bb71ba2a29f6548a43 1022 Gene3D G3DSA:1.10.8.280 315 438 1.7E-39 T 19-04-2016 ALIDE2_RS02690 c9e45b25c059318522549bfbb1c21465 519 PANTHER PTHR24096 17 519 5.4E-185 T 19-04-2016 ALIDE2_RS02690 c9e45b25c059318522549bfbb1c21465 519 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 501 3.0E-19 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS02690 c9e45b25c059318522549bfbb1c21465 519 Gene3D G3DSA:3.30.300.30 411 512 7.1E-30 T 19-04-2016 ALIDE2_RS02690 c9e45b25c059318522549bfbb1c21465 519 PANTHER PTHR24096:SF141 17 519 5.4E-185 T 19-04-2016 ALIDE2_RS02690 c9e45b25c059318522549bfbb1c21465 519 Pfam PF00501 AMP-binding enzyme 20 416 1.6E-91 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS02690 c9e45b25c059318522549bfbb1c21465 519 Gene3D G3DSA:2.30.38.10 335 407 1.1E-29 T 19-04-2016 ALIDE2_RS02690 c9e45b25c059318522549bfbb1c21465 519 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS02690 c9e45b25c059318522549bfbb1c21465 519 SUPERFAMILY SSF56801 14 514 1.96E-136 T 19-04-2016 ALIDE2_RS02690 c9e45b25c059318522549bfbb1c21465 519 Gene3D G3DSA:3.40.50.980 15 172 3.6E-23 T 19-04-2016 ALIDE2_RS02690 c9e45b25c059318522549bfbb1c21465 519 Gene3D G3DSA:3.40.50.980 173 328 3.3E-33 T 19-04-2016 ALIDE2_RS15340 ca29ac70043c4d71bdfbbe3cfdf74ce5 90 SUPERFAMILY SSF111148 1 89 1.96E-40 T 19-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ALIDE2_RS15340 ca29ac70043c4d71bdfbbe3cfdf74ce5 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 29.341 T 19-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ALIDE2_RS15340 ca29ac70043c4d71bdfbbe3cfdf74ce5 90 PANTHER PTHR36965 2 90 8.1E-47 T 19-04-2016 ALIDE2_RS15340 ca29ac70043c4d71bdfbbe3cfdf74ce5 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 3.1E-44 T 19-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ALIDE2_RS15340 ca29ac70043c4d71bdfbbe3cfdf74ce5 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 4.0E-38 T 19-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ALIDE2_RS15340 ca29ac70043c4d71bdfbbe3cfdf74ce5 90 PANTHER PTHR36965:SF1 2 90 8.1E-47 T 19-04-2016 ALIDE2_RS15340 ca29ac70043c4d71bdfbbe3cfdf74ce5 90 Gene3D G3DSA:1.10.3880.10 1 89 6.9E-43 T 19-04-2016 ALIDE2_RS15340 ca29ac70043c4d71bdfbbe3cfdf74ce5 90 PIRSF PIRSF029827 1 90 1.8E-41 T 19-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ALIDE2_RS04935 75230e87f4ee75c2751531b2763a1109 196 PIRSF PIRSF004553 11 190 3.1E-38 T 19-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS04935 75230e87f4ee75c2751531b2763a1109 196 PANTHER PTHR18895:SF60 11 158 3.5E-28 T 19-04-2016 ALIDE2_RS04935 75230e87f4ee75c2751531b2763a1109 196 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 5 187 6.1E-39 T 19-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS04935 75230e87f4ee75c2751531b2763a1109 196 SUPERFAMILY SSF53335 12 187 1.88E-41 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS04935 75230e87f4ee75c2751531b2763a1109 196 Gene3D G3DSA:3.40.50.150 6 192 6.8E-55 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS04935 75230e87f4ee75c2751531b2763a1109 196 Pfam PF03602 Conserved hypothetical protein 95 12 186 1.8E-41 T 19-04-2016 ALIDE2_RS04935 75230e87f4ee75c2751531b2763a1109 196 PANTHER PTHR18895 11 158 3.5E-28 T 19-04-2016 ALIDE2_RS10720 ccf2454120140d31b4264945131a30ce 108 PANTHER PTHR37483:SF1 2 104 4.2E-16 T 19-04-2016 ALIDE2_RS10720 ccf2454120140d31b4264945131a30ce 108 Gene3D G3DSA:3.10.20.280 2 85 4.2E-22 T 19-04-2016 IPR005346 RnfH protein ALIDE2_RS10720 ccf2454120140d31b4264945131a30ce 108 SUPERFAMILY SSF54285 3 75 7.59E-14 T 19-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ALIDE2_RS10720 ccf2454120140d31b4264945131a30ce 108 Hamap MF_00460 Protein RnfH [rnfH]. 5 91 16.224 T 19-04-2016 IPR005346 RnfH protein ALIDE2_RS10720 ccf2454120140d31b4264945131a30ce 108 Pfam PF03658 RnfH family Ubiquitin 6 83 2.1E-18 T 19-04-2016 IPR005346 RnfH protein ALIDE2_RS10720 ccf2454120140d31b4264945131a30ce 108 PANTHER PTHR37483 2 104 4.2E-16 T 19-04-2016 ALIDE2_RS21000 bc0a79ee4773e4209f0baa392e19dca4 660 Pfam PF00460 Flagella basal body rod protein 4 33 1.1E-4 T 19-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ALIDE2_RS21000 bc0a79ee4773e4209f0baa392e19dca4 660 PANTHER PTHR30033:SF1 1 428 4.5E-90 T 19-04-2016 ALIDE2_RS21000 bc0a79ee4773e4209f0baa392e19dca4 660 PANTHER PTHR30033:SF1 457 659 4.5E-90 T 19-04-2016 ALIDE2_RS21000 bc0a79ee4773e4209f0baa392e19dca4 660 SUPERFAMILY SSF64518 133 361 6.02E-37 T 19-04-2016 ALIDE2_RS21000 bc0a79ee4773e4209f0baa392e19dca4 660 SUPERFAMILY SSF64518 471 656 6.02E-37 T 19-04-2016 ALIDE2_RS21000 bc0a79ee4773e4209f0baa392e19dca4 660 PANTHER PTHR30033 1 428 4.5E-90 T 19-04-2016 ALIDE2_RS21000 bc0a79ee4773e4209f0baa392e19dca4 660 PANTHER PTHR30033 457 659 4.5E-90 T 19-04-2016 ALIDE2_RS21000 bc0a79ee4773e4209f0baa392e19dca4 660 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 603 656 2.5E-10 T 19-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ALIDE2_RS21000 bc0a79ee4773e4209f0baa392e19dca4 660 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 329 1.8E-66 T 19-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ALIDE2_RS21000 bc0a79ee4773e4209f0baa392e19dca4 660 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 6.0E-10 T 19-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ALIDE2_RS21000 bc0a79ee4773e4209f0baa392e19dca4 660 PRINTS PR01005 Flagellar hook-associated protein signature 259 281 6.0E-10 T 19-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ALIDE2_RS21000 bc0a79ee4773e4209f0baa392e19dca4 660 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 6.0E-10 T 19-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ALIDE2_RS21000 bc0a79ee4773e4209f0baa392e19dca4 660 PRINTS PR01005 Flagellar hook-associated protein signature 411 428 6.0E-10 T 19-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ALIDE2_RS21000 bc0a79ee4773e4209f0baa392e19dca4 660 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 6.0E-10 T 19-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ALIDE2_RS18830 5526a8a7bb84f210fc51b1dd53aae73e 237 PANTHER PTHR30450:SF4 1 237 5.0E-84 T 19-04-2016 ALIDE2_RS18830 5526a8a7bb84f210fc51b1dd53aae73e 237 Gene3D G3DSA:1.10.3720.10 15 228 8.9E-40 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18830 5526a8a7bb84f210fc51b1dd53aae73e 237 SUPERFAMILY SSF161098 15 220 2.22E-37 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18830 5526a8a7bb84f210fc51b1dd53aae73e 237 PANTHER PTHR30450 1 237 5.0E-84 T 19-04-2016 ALIDE2_RS18830 5526a8a7bb84f210fc51b1dd53aae73e 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 120 3.3E-17 T 19-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 ALIDE2_RS18830 5526a8a7bb84f210fc51b1dd53aae73e 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 228 5.1E-19 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 267 425 5.2E-40 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 SUPERFAMILY SSF55073 273 431 7.06E-46 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 Pfam PF08448 PAS fold 28 138 4.0E-13 T 19-04-2016 IPR013656 PAS fold-4 ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 SUPERFAMILY SSF55785 40 147 1.01E-11 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 Gene3D G3DSA:3.30.450.20 137 255 8.8E-26 T 19-04-2016 ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 Gene3D G3DSA:3.20.20.450 443 691 2.0E-99 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 PANTHER PTHR33121 414 693 6.5E-84 T 19-04-2016 ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 263 2.4E-22 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 144 1.4E-6 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 SMART SM00267 257 429 4.5E-61 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 Pfam PF00990 Diguanylate cyclase, GGDEF domain 268 424 1.6E-44 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 Gene3D G3DSA:3.30.70.270 270 434 5.8E-54 T 19-04-2016 ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 PANTHER PTHR33121:SF13 414 693 6.5E-84 T 19-04-2016 ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 SUPERFAMILY SSF55785 135 255 1.68E-25 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 Pfam PF13426 PAS domain 167 256 2.1E-15 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 SMART SM00052 439 685 1.3E-109 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 Gene3D G3DSA:3.30.450.20 18 136 3.9E-13 T 19-04-2016 ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 Pfam PF00563 EAL domain 447 680 6.0E-73 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 SUPERFAMILY SSF141868 444 692 1.31E-85 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 SMART SM00091 150 215 6.9E-11 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02650 567c34c7a036a865a7cf1817b65a287b 698 SMART SM00091 21 88 4.0 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS00725 23c0fbff58f464f61339d2064f2815a8 261 SUPERFAMILY SSF55781 75 250 2.55E-42 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00725 23c0fbff58f464f61339d2064f2815a8 261 PANTHER PTHR30136:SF10 9 250 2.0E-60 T 19-04-2016 ALIDE2_RS00725 23c0fbff58f464f61339d2064f2815a8 261 SMART SM00346 10 98 3.0E-13 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS00725 23c0fbff58f464f61339d2064f2815a8 261 PANTHER PTHR30136 9 250 2.0E-60 T 19-04-2016 ALIDE2_RS00725 23c0fbff58f464f61339d2064f2815a8 261 Pfam PF01614 Bacterial transcriptional regulator 129 250 1.9E-28 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS00725 23c0fbff58f464f61339d2064f2815a8 261 SUPERFAMILY SSF46785 10 80 1.36E-10 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00725 23c0fbff58f464f61339d2064f2815a8 261 Pfam PF09339 IclR helix-turn-helix domain 14 57 3.6E-8 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS00725 23c0fbff58f464f61339d2064f2815a8 261 Gene3D G3DSA:1.10.10.10 4 77 9.2E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00725 23c0fbff58f464f61339d2064f2815a8 261 Gene3D G3DSA:3.30.450.40 78 251 1.2E-46 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.3E-49 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.3E-49 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.3E-49 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 4.3E-49 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.3E-49 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.3E-49 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 PANTHER PTHR24322:SF328 155 187 9.2E-53 T 19-04-2016 ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 PANTHER PTHR24322:SF328 10 139 9.2E-53 T 19-04-2016 ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 SUPERFAMILY SSF51735 6 247 2.85E-78 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 4.1E-5 T 19-04-2016 ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 PANTHER PTHR24322 155 187 9.2E-53 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 PANTHER PTHR24322 10 139 9.2E-53 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 246 1.3E-58 T 19-04-2016 ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 6.5E-16 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 6.5E-16 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.5E-16 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 6 247 7.1E-108 T 19-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 Gene3D G3DSA:3.40.50.720 2 247 2.1E-80 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS08600 c31ddc181b2ee9777be110bad75febc0 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS00635 f14c1116c7ed8a58bacde8dc7b2a4c35 151 Pfam PF03061 Thioesterase superfamily 62 137 2.2E-12 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS00635 f14c1116c7ed8a58bacde8dc7b2a4c35 151 PANTHER PTHR12418 19 148 1.5E-20 T 19-04-2016 ALIDE2_RS00635 f14c1116c7ed8a58bacde8dc7b2a4c35 151 SUPERFAMILY SSF54637 25 149 4.6E-28 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS00635 f14c1116c7ed8a58bacde8dc7b2a4c35 151 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 31 142 6.3E-16 T 19-04-2016 IPR003736 Phenylacetic acid degradation-related domain ALIDE2_RS00635 f14c1116c7ed8a58bacde8dc7b2a4c35 151 Gene3D G3DSA:3.10.129.10 31 146 9.3E-28 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 SMART SM00958 228 362 4.7E-81 T 19-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 Gene3D G3DSA:3.40.50.300 3 228 1.3E-128 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 Gene3D G3DSA:3.40.50.300 373 420 1.3E-128 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 Pfam PF01043 SecA preprotein cross-linking domain 232 362 1.8E-37 T 19-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 SUPERFAMILY SSF52540 372 419 4.75E-86 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 SUPERFAMILY SSF52540 4 228 4.75E-86 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 Gene3D G3DSA:1.10.3060.10 659 842 7.0E-55 T 19-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 Pfam PF07517 SecA DEAD-like domain 7 406 2.9E-133 T 19-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 Pfam PF02810 SEC-C motif 899 917 1.7E-10 T 19-04-2016 IPR004027 SEC-C motif ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 SUPERFAMILY SSF81886 633 851 4.19E-80 T 19-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 SUPERFAMILY SSF81886 895 907 4.19E-80 T 19-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 843 19.932 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 829 0.0 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 PRINTS PR00906 SecA protein signature 63 87 6.6E-70 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 PRINTS PR00906 SecA protein signature 380 397 6.6E-70 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 PRINTS PR00906 SecA protein signature 101 115 6.6E-70 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 PRINTS PR00906 SecA protein signature 170 190 6.6E-70 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 PRINTS PR00906 SecA protein signature 343 365 6.6E-70 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 PRINTS PR00906 SecA protein signature 117 127 6.6E-70 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 PRINTS PR00906 SecA protein signature 417 430 6.6E-70 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 ProSitePatterns PS01312 SecA family signature. 504 519 - T 19-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 Pfam PF07516 SecA Wing and Scaffold domain 628 841 8.7E-65 T 19-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 SMART SM00957 6 406 0.0 T 19-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 Gene3D G3DSA:3.40.50.300 421 630 1.3E-89 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 SUPERFAMILY SSF52540 421 629 6.47E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 PANTHER PTHR30612 5 524 0.0 T 19-04-2016 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 PANTHER PTHR30612 561 919 0.0 T 19-04-2016 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 Gene3D G3DSA:3.90.1440.10 230 372 1.6E-45 T 19-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 ALIDE2_RS04310 388fe1269be11305c823dd927d6fe41b 919 SUPERFAMILY SSF81767 227 372 2.88E-43 T 19-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 ALIDE2_RS20500 da802cc6824374eef7128ebbafbf37bf 604 SMART SM00116 217 265 1.2E-6 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS20500 da802cc6824374eef7128ebbafbf37bf 604 Pfam PF03445 Putative nucleotidyltransferase DUF294 290 420 3.3E-38 T 19-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 ALIDE2_RS20500 da802cc6824374eef7128ebbafbf37bf 604 Gene3D G3DSA:2.60.120.10 12 134 6.4E-9 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS20500 da802cc6824374eef7128ebbafbf37bf 604 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 460 598 2.5E-39 T 19-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding ALIDE2_RS20500 da802cc6824374eef7128ebbafbf37bf 604 PANTHER PTHR11911 145 255 2.0E-12 T 19-04-2016 ALIDE2_RS20500 da802cc6824374eef7128ebbafbf37bf 604 Gene3D G3DSA:3.10.580.10 146 266 1.6E-17 T 19-04-2016 ALIDE2_RS20500 da802cc6824374eef7128ebbafbf37bf 604 SUPERFAMILY SSF51206 10 133 5.11E-13 T 19-04-2016 IPR018490 Cyclic nucleotide-binding-like ALIDE2_RS20500 da802cc6824374eef7128ebbafbf37bf 604 Pfam PF00571 CBS domain 210 265 9.6E-9 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS20500 da802cc6824374eef7128ebbafbf37bf 604 SUPERFAMILY SSF54631 144 267 2.0E-18 T 19-04-2016 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 SUPERFAMILY SSF55957 358 442 4.84E-22 T 19-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 SUPERFAMILY SSF53738 156 255 5.1E-30 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 Gene3D G3DSA:3.40.120.10 3 152 5.5E-48 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 440 6.3E-15 T 19-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 SUPERFAMILY SSF53738 258 365 7.46E-30 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 Gene3D G3DSA:3.40.120.10 251 367 3.9E-34 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 3.5E-32 T 19-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 19-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 4.5E-42 T 19-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 441 7.4E-178 T 19-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 PANTHER PTHR22573 3 440 1.9E-157 T 19-04-2016 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 1.9E-20 T 19-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 444 45.603 T 19-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 SUPERFAMILY SSF53738 2 181 4.71E-48 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 PANTHER PTHR22573:SF15 3 440 1.9E-157 T 19-04-2016 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 Gene3D G3DSA:3.30.310.50 369 440 2.1E-16 T 19-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 Gene3D G3DSA:3.40.120.10 176 250 8.6E-26 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 3.2E-13 T 19-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 3.2E-13 T 19-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS13325 1c1e39e9e9d664d16b57c6162ad3fe2f 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 3.2E-13 T 19-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS23300 5b209ed6a44746b69a790c5dfc87eb29 260 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS23300 5b209ed6a44746b69a790c5dfc87eb29 260 PANTHER PTHR24220:SF358 12 253 1.0E-88 T 19-04-2016 ALIDE2_RS23300 5b209ed6a44746b69a790c5dfc87eb29 260 SUPERFAMILY SSF52540 10 252 9.53E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23300 5b209ed6a44746b69a790c5dfc87eb29 260 Gene3D G3DSA:3.40.50.300 8 250 5.2E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23300 5b209ed6a44746b69a790c5dfc87eb29 260 Pfam PF00005 ABC transporter 28 183 1.8E-25 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS23300 5b209ed6a44746b69a790c5dfc87eb29 260 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 252 4.0E-10 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALIDE2_RS23300 5b209ed6a44746b69a790c5dfc87eb29 260 SMART SM00382 35 230 2.5E-5 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS23300 5b209ed6a44746b69a790c5dfc87eb29 260 PANTHER PTHR24220 12 253 1.0E-88 T 19-04-2016 ALIDE2_RS05040 107efdb4fb68e1dfa5cf7e99d2090606 283 SUPERFAMILY SSF52374 2 282 1.33E-86 T 19-04-2016 ALIDE2_RS05040 107efdb4fb68e1dfa5cf7e99d2090606 283 PANTHER PTHR21299:SF1 1 282 2.7E-96 T 19-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 ALIDE2_RS05040 107efdb4fb68e1dfa5cf7e99d2090606 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 6 281 4.2E-73 T 19-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 ALIDE2_RS05040 107efdb4fb68e1dfa5cf7e99d2090606 283 PANTHER PTHR21299 1 282 2.7E-96 T 19-04-2016 ALIDE2_RS05040 107efdb4fb68e1dfa5cf7e99d2090606 283 Pfam PF02569 Pantoate-beta-alanine ligase 5 281 4.3E-86 T 19-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 ALIDE2_RS05040 107efdb4fb68e1dfa5cf7e99d2090606 283 Gene3D G3DSA:3.40.50.620 3 174 1.6E-63 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS05040 107efdb4fb68e1dfa5cf7e99d2090606 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 283 34.217 T 19-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 ALIDE2_RS05040 107efdb4fb68e1dfa5cf7e99d2090606 283 Gene3D G3DSA:3.30.1300.10 181 282 1.7E-26 T 19-04-2016 ALIDE2_RS04805 ea8d3d4a47fb6ca88a4c743e26f64e53 724 Gene3D G3DSA:1.10.3850.10 2 193 5.3E-51 T 19-04-2016 ALIDE2_RS04805 ea8d3d4a47fb6ca88a4c743e26f64e53 724 Gene3D G3DSA:1.10.3850.10 503 716 3.6E-55 T 19-04-2016 ALIDE2_RS04805 ea8d3d4a47fb6ca88a4c743e26f64e53 724 Pfam PF00873 AcrB/AcrD/AcrF family 1 714 2.3E-199 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS04805 ea8d3d4a47fb6ca88a4c743e26f64e53 724 SUPERFAMILY SSF82866 495 717 2.09E-53 T 19-04-2016 ALIDE2_RS04805 ea8d3d4a47fb6ca88a4c743e26f64e53 724 PRINTS PR00702 Acriflavin resistance protein family signature 237 254 5.0E-34 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS04805 ea8d3d4a47fb6ca88a4c743e26f64e53 724 PRINTS PR00702 Acriflavin resistance protein family signature 27 50 5.0E-34 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS04805 ea8d3d4a47fb6ca88a4c743e26f64e53 724 PRINTS PR00702 Acriflavin resistance protein family signature 165 188 5.0E-34 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS04805 ea8d3d4a47fb6ca88a4c743e26f64e53 724 PRINTS PR00702 Acriflavin resistance protein family signature 82 106 5.0E-34 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS04805 ea8d3d4a47fb6ca88a4c743e26f64e53 724 PRINTS PR00702 Acriflavin resistance protein family signature 54 75 5.0E-34 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS04805 ea8d3d4a47fb6ca88a4c743e26f64e53 724 SUPERFAMILY SSF82693 251 347 1.46E-5 T 19-04-2016 ALIDE2_RS04805 ea8d3d4a47fb6ca88a4c743e26f64e53 724 PANTHER PTHR32063:SF24 1 720 1.0E-295 T 19-04-2016 ALIDE2_RS04805 ea8d3d4a47fb6ca88a4c743e26f64e53 724 SUPERFAMILY SSF82866 6 192 6.02E-38 T 19-04-2016 ALIDE2_RS04805 ea8d3d4a47fb6ca88a4c743e26f64e53 724 SUPERFAMILY SSF82714 409 495 1.14E-8 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS04805 ea8d3d4a47fb6ca88a4c743e26f64e53 724 Gene3D G3DSA:3.30.2090.10 409 498 6.9E-10 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS04805 ea8d3d4a47fb6ca88a4c743e26f64e53 724 PANTHER PTHR32063 1 720 1.0E-295 T 19-04-2016 ALIDE2_RS11680 fa06fbc932d9eded452b967dad67bde1 239 SMART SM00419 181 229 1.2E-10 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS11680 fa06fbc932d9eded452b967dad67bde1 239 SUPERFAMILY SSF46785 150 233 1.91E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11680 fa06fbc932d9eded452b967dad67bde1 239 PANTHER PTHR24567 12 234 4.3E-37 T 19-04-2016 ALIDE2_RS11680 fa06fbc932d9eded452b967dad67bde1 239 PANTHER PTHR24567:SF30 12 234 4.3E-37 T 19-04-2016 ALIDE2_RS11680 fa06fbc932d9eded452b967dad67bde1 239 SMART SM00100 17 135 2.7E-14 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS11680 fa06fbc932d9eded452b967dad67bde1 239 Pfam PF00027 Cyclic nucleotide-binding domain 36 120 3.3E-15 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS11680 fa06fbc932d9eded452b967dad67bde1 239 Pfam PF13545 Crp-like helix-turn-helix domain 155 235 3.5E-14 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS11680 fa06fbc932d9eded452b967dad67bde1 239 SUPERFAMILY SSF51206 11 145 1.57E-29 T 19-04-2016 IPR018490 Cyclic nucleotide-binding-like ALIDE2_RS11680 fa06fbc932d9eded452b967dad67bde1 239 Gene3D G3DSA:1.10.10.10 156 235 3.6E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11680 fa06fbc932d9eded452b967dad67bde1 239 Gene3D G3DSA:2.60.120.10 14 149 1.9E-29 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 SMART SM00841 128 183 2.5E-28 T 19-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 PIRSF PIRSF005901 1 184 7.8E-56 T 19-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 SUPERFAMILY SSF50249 65 126 3.21E-14 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 Gene3D G3DSA:2.40.50.140 65 126 2.0E-18 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 Gene3D G3DSA:2.40.50.140 127 184 9.9E-27 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 Gene3D G3DSA:2.30.30.30 1 62 7.9E-17 T 19-04-2016 IPR014722 Ribosomal protein L2 domain 2 ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 PANTHER PTHR30053 1 184 2.3E-65 T 19-04-2016 ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 SUPERFAMILY SSF50104 1 62 3.91E-14 T 19-04-2016 IPR008991 Translation protein SH3-like domain ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 TIGRFAM TIGR00038 efp: translation elongation factor P 4 184 5.0E-62 T 19-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 7.6E-18 T 19-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 SUPERFAMILY SSF50249 128 184 2.91E-17 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 Pfam PF09285 Elongation factor P, C-terminal 128 183 2.8E-24 T 19-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 ProSitePatterns PS01275 Elongation factor P signature. 149 168 - T 19-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 SMART SM01185 67 120 2.2E-13 T 19-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 Hamap MF_00141 Elongation factor P [efp]. 1 184 44.894 T 19-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 ALIDE2_RS08395 863ff784b0da16a10a87aa3f06ecb47f 184 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 5.0E-15 T 19-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 ALIDE2_RS18700 6b14511acdddbb711542a0fbfa37d9bb 80 PIRSF PIRSF006488 5 80 3.3E-21 T 19-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ALIDE2_RS18700 6b14511acdddbb711542a0fbfa37d9bb 80 Pfam PF02609 Exonuclease VII small subunit 17 67 6.5E-19 T 19-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ALIDE2_RS18700 6b14511acdddbb711542a0fbfa37d9bb 80 PANTHER PTHR34137 4 71 5.5E-16 T 19-04-2016 ALIDE2_RS18700 6b14511acdddbb711542a0fbfa37d9bb 80 Gene3D G3DSA:1.10.287.1040 12 79 4.8E-24 T 19-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ALIDE2_RS18700 6b14511acdddbb711542a0fbfa37d9bb 80 SUPERFAMILY SSF116842 11 78 3.79E-19 T 19-04-2016 ALIDE2_RS18700 6b14511acdddbb711542a0fbfa37d9bb 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 16 56 5.0E-7 T 19-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ALIDE2_RS18700 6b14511acdddbb711542a0fbfa37d9bb 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 16 76 14.024 T 19-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ALIDE2_RS18700 6b14511acdddbb711542a0fbfa37d9bb 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 16 71 2.5E-21 T 19-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ALIDE2_RS20835 07e86c9cd9a8178c82636fa0c05ec811 154 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 11 144 2.0E-18 T 19-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 ALIDE2_RS20835 07e86c9cd9a8178c82636fa0c05ec811 154 Pfam PF02050 Flagellar FliJ protein 19 141 3.2E-23 T 19-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 ALIDE2_RS20835 07e86c9cd9a8178c82636fa0c05ec811 154 PANTHER PTHR38786 1 149 2.2E-17 T 19-04-2016 ALIDE2_RS17270 c644ff5ae0858bd835a59f6d5c550d38 161 SUPERFAMILY SSF49503 49 159 1.92E-29 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS17270 c644ff5ae0858bd835a59f6d5c550d38 161 ProSitePatterns PS00079 Multicopper oxidases signature 1. 137 157 - T 19-04-2016 IPR033138 Multicopper oxidases, conserved site ALIDE2_RS17270 c644ff5ae0858bd835a59f6d5c550d38 161 Gene3D G3DSA:2.60.40.420 39 161 2.2E-36 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS17270 c644ff5ae0858bd835a59f6d5c550d38 161 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 58 159 2.6E-6 T 19-04-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 ALIDE2_RS06990 be57447155fdb15d972d854321952522 257 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 50 254 4.1E-50 T 19-04-2016 ALIDE2_RS06990 be57447155fdb15d972d854321952522 257 PANTHER PTHR11579 38 252 1.9E-51 T 19-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 ALIDE2_RS06990 be57447155fdb15d972d854321952522 257 SUPERFAMILY SSF53335 47 255 1.48E-35 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS06990 be57447155fdb15d972d854321952522 257 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 50 255 2.8E-53 T 19-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 ALIDE2_RS06990 be57447155fdb15d972d854321952522 257 Gene3D G3DSA:3.40.50.150 55 255 2.0E-51 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS04280 98e0ab7deec6e631dab2e492253fdbd6 473 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 297 446 4.3E-41 T 19-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 ALIDE2_RS04280 98e0ab7deec6e631dab2e492253fdbd6 473 SUPERFAMILY SSF81342 36 299 3.3E-95 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 ALIDE2_RS04280 98e0ab7deec6e631dab2e492253fdbd6 473 SUPERFAMILY SSF81648 300 328 1.35E-9 T 19-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 ALIDE2_RS04280 98e0ab7deec6e631dab2e492253fdbd6 473 PANTHER PTHR19271:SF9 373 468 4.0E-219 T 19-04-2016 ALIDE2_RS04280 98e0ab7deec6e631dab2e492253fdbd6 473 PANTHER PTHR19271:SF9 18 325 4.0E-219 T 19-04-2016 ALIDE2_RS04280 98e0ab7deec6e631dab2e492253fdbd6 473 Pfam PF00033 Cytochrome b/b6/petB 40 227 2.2E-67 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 ALIDE2_RS04280 98e0ab7deec6e631dab2e492253fdbd6 473 SUPERFAMILY SSF81648 365 459 1.31E-17 T 19-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 ALIDE2_RS04280 98e0ab7deec6e631dab2e492253fdbd6 473 Gene3D G3DSA:1.20.810.10 374 462 2.6E-157 T 19-04-2016 IPR027387 Cytochrome b/b6-like domain ALIDE2_RS04280 98e0ab7deec6e631dab2e492253fdbd6 473 Gene3D G3DSA:1.20.810.10 22 326 2.6E-157 T 19-04-2016 IPR027387 Cytochrome b/b6-like domain ALIDE2_RS04280 98e0ab7deec6e631dab2e492253fdbd6 473 PANTHER PTHR19271 373 468 4.0E-219 T 19-04-2016 ALIDE2_RS04280 98e0ab7deec6e631dab2e492253fdbd6 473 PANTHER PTHR19271 18 325 4.0E-219 T 19-04-2016 ALIDE2_RS15685 f3050ce7e0ad68922d0c903f919d0f17 260 Pfam PF08241 Methyltransferase domain 84 133 3.9E-8 T 19-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 ALIDE2_RS15685 f3050ce7e0ad68922d0c903f919d0f17 260 PANTHER PTHR10108 84 244 1.5E-18 T 19-04-2016 ALIDE2_RS15685 f3050ce7e0ad68922d0c903f919d0f17 260 PANTHER PTHR10108:SF836 84 244 1.5E-18 T 19-04-2016 ALIDE2_RS15685 f3050ce7e0ad68922d0c903f919d0f17 260 SUPERFAMILY SSF53335 85 231 1.25E-18 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS15685 f3050ce7e0ad68922d0c903f919d0f17 260 Gene3D G3DSA:3.40.50.150 87 231 1.5E-17 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS18755 bf0deefc9011652c067668ca9410e31c 298 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 140 170 - T 19-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS18755 bf0deefc9011652c067668ca9410e31c 298 PANTHER PTHR12128 1 298 6.5E-134 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS18755 bf0deefc9011652c067668ca9410e31c 298 Pfam PF00701 Dihydrodipicolinate synthetase family 8 294 1.7E-97 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS18755 bf0deefc9011652c067668ca9410e31c 298 SUPERFAMILY SSF51569 3 298 4.4E-104 T 19-04-2016 ALIDE2_RS18755 bf0deefc9011652c067668ca9410e31c 298 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 293 1.8E-107 T 19-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS18755 bf0deefc9011652c067668ca9410e31c 298 Gene3D G3DSA:3.20.20.70 7 298 1.6E-117 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS18755 bf0deefc9011652c067668ca9410e31c 298 SMART SM01130 7 296 3.2E-141 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS18755 bf0deefc9011652c067668ca9410e31c 298 PANTHER PTHR12128:SF34 1 298 6.5E-134 T 19-04-2016 ALIDE2_RS18755 bf0deefc9011652c067668ca9410e31c 298 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 7 294 66.132 T 19-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS18755 bf0deefc9011652c067668ca9410e31c 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 6.7E-30 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS18755 bf0deefc9011652c067668ca9410e31c 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 6.7E-30 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS18755 bf0deefc9011652c067668ca9410e31c 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 109 125 6.7E-30 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS18755 bf0deefc9011652c067668ca9410e31c 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 6.7E-30 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS18755 bf0deefc9011652c067668ca9410e31c 298 PIRSF PIRSF001365 5 298 6.7E-87 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS05535 7304bb70b2f13ead0b78da30487d495d 142 PANTHER PTHR12418:SF28 12 138 8.8E-28 T 19-04-2016 ALIDE2_RS05535 7304bb70b2f13ead0b78da30487d495d 142 SUPERFAMILY SSF54637 9 140 8.71E-27 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS05535 7304bb70b2f13ead0b78da30487d495d 142 PANTHER PTHR12418 12 138 8.8E-28 T 19-04-2016 ALIDE2_RS05535 7304bb70b2f13ead0b78da30487d495d 142 Gene3D G3DSA:3.10.129.10 5 138 1.9E-33 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS05535 7304bb70b2f13ead0b78da30487d495d 142 Pfam PF03061 Thioesterase superfamily 47 117 8.0E-12 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS05535 7304bb70b2f13ead0b78da30487d495d 142 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 17 117 3.1E-16 T 19-04-2016 IPR003736 Phenylacetic acid degradation-related domain ALIDE2_RS00460 c23a84789498ca680572ecf8f58ef311 259 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 11 92 4.9E-13 T 19-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 ALIDE2_RS00460 c23a84789498ca680572ecf8f58ef311 259 PANTHER PTHR34108:SF1 13 259 1.7E-33 T 19-04-2016 ALIDE2_RS00460 c23a84789498ca680572ecf8f58ef311 259 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 13 259 4.4E-58 T 19-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 ALIDE2_RS00460 c23a84789498ca680572ecf8f58ef311 259 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 12 259 24.135 T 19-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 ALIDE2_RS00460 c23a84789498ca680572ecf8f58ef311 259 PANTHER PTHR34108 13 259 1.7E-33 T 19-04-2016 ALIDE2_RS00460 c23a84789498ca680572ecf8f58ef311 259 Gene3D G3DSA:2.160.20.70 147 259 6.5E-36 T 19-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 ALIDE2_RS00460 c23a84789498ca680572ecf8f58ef311 259 SUPERFAMILY SSF63848 154 259 5.62E-29 T 19-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 ALIDE2_RS00460 c23a84789498ca680572ecf8f58ef311 259 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 155 257 4.9E-30 T 19-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 ALIDE2_RS04895 1dc6ca13509ebfa2878ba2e97bfbc430 388 PANTHER PTHR13794:SF58 1 382 3.1E-106 T 19-04-2016 ALIDE2_RS04895 1dc6ca13509ebfa2878ba2e97bfbc430 388 SUPERFAMILY SSF51604 123 383 1.7E-54 T 19-04-2016 IPR029065 Enolase C-terminal domain-like ALIDE2_RS04895 1dc6ca13509ebfa2878ba2e97bfbc430 388 Pfam PF13378 Enolase C-terminal domain-like 166 376 1.8E-39 T 19-04-2016 IPR029065 Enolase C-terminal domain-like ALIDE2_RS04895 1dc6ca13509ebfa2878ba2e97bfbc430 388 PANTHER PTHR13794 1 382 3.1E-106 T 19-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 ALIDE2_RS04895 1dc6ca13509ebfa2878ba2e97bfbc430 388 Gene3D G3DSA:3.30.390.10 1 121 8.1E-48 T 19-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ALIDE2_RS04895 1dc6ca13509ebfa2878ba2e97bfbc430 388 SMART SM00922 162 259 7.6E-16 T 19-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ALIDE2_RS04895 1dc6ca13509ebfa2878ba2e97bfbc430 388 Gene3D G3DSA:3.20.20.120 122 383 1.3E-58 T 19-04-2016 IPR029065 Enolase C-terminal domain-like ALIDE2_RS04895 1dc6ca13509ebfa2878ba2e97bfbc430 388 SUPERFAMILY SSF54826 1 138 4.98E-29 T 19-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ALIDE2_RS18890 9ec7fe4d5143d8f02af53377140b0317 88 Gene3D G3DSA:1.10.10.60 15 83 1.5E-10 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS18890 9ec7fe4d5143d8f02af53377140b0317 88 SUPERFAMILY SSF46689 2 73 2.15E-11 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS18890 9ec7fe4d5143d8f02af53377140b0317 88 PANTHER PTHR33609:SF1 2 87 2.7E-35 T 19-04-2016 ALIDE2_RS18890 9ec7fe4d5143d8f02af53377140b0317 88 PANTHER PTHR33609 2 87 2.7E-35 T 19-04-2016 ALIDE2_RS18890 9ec7fe4d5143d8f02af53377140b0317 88 Pfam PF01527 Transposase 2 71 6.3E-21 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS12110 9ec7fe4d5143d8f02af53377140b0317 88 Gene3D G3DSA:1.10.10.60 15 83 1.5E-10 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS12110 9ec7fe4d5143d8f02af53377140b0317 88 SUPERFAMILY SSF46689 2 73 2.15E-11 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS12110 9ec7fe4d5143d8f02af53377140b0317 88 PANTHER PTHR33609:SF1 2 87 2.7E-35 T 19-04-2016 ALIDE2_RS12110 9ec7fe4d5143d8f02af53377140b0317 88 PANTHER PTHR33609 2 87 2.7E-35 T 19-04-2016 ALIDE2_RS12110 9ec7fe4d5143d8f02af53377140b0317 88 Pfam PF01527 Transposase 2 71 6.3E-21 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS13195 3ac49cb0cb5021bc30baf1f9414fceec 344 SUPERFAMILY SSF53807 40 305 2.47E-37 T 19-04-2016 ALIDE2_RS13195 3ac49cb0cb5021bc30baf1f9414fceec 344 Gene3D G3DSA:3.40.50.1980 176 305 1.2E-26 T 19-04-2016 ALIDE2_RS13195 3ac49cb0cb5021bc30baf1f9414fceec 344 Gene3D G3DSA:3.40.50.1980 40 165 2.9E-8 T 19-04-2016 ALIDE2_RS13195 3ac49cb0cb5021bc30baf1f9414fceec 344 PANTHER PTHR30535 39 342 1.2E-33 T 19-04-2016 ALIDE2_RS13195 3ac49cb0cb5021bc30baf1f9414fceec 344 Pfam PF01497 Periplasmic binding protein 90 277 5.6E-18 T 19-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 ALIDE2_RS02755 c061dbd8a7a0de8a8da5adf404f43b7e 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 201 3.4E-62 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ALIDE2_RS02755 c061dbd8a7a0de8a8da5adf404f43b7e 215 SUPERFAMILY SSF53254 5 208 1.07E-56 T 19-04-2016 IPR029033 Histidine phosphatase superfamily ALIDE2_RS02755 c061dbd8a7a0de8a8da5adf404f43b7e 215 PANTHER PTHR23029 2 214 5.0E-52 T 19-04-2016 ALIDE2_RS02755 c061dbd8a7a0de8a8da5adf404f43b7e 215 PANTHER PTHR23029:SF1 2 214 5.0E-52 T 19-04-2016 ALIDE2_RS02755 c061dbd8a7a0de8a8da5adf404f43b7e 215 SMART SM00855 6 161 2.3E-21 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ALIDE2_RS02755 c061dbd8a7a0de8a8da5adf404f43b7e 215 Gene3D G3DSA:3.40.50.1240 3 211 3.9E-63 T 19-04-2016 IPR029033 Histidine phosphatase superfamily ALIDE2_RS09760 0e1c7c0307861d7d6ac9bd66f9942f5e 148 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 35 144 3.4E-40 T 19-04-2016 IPR011090 Integrating conjugative element protein, PFL4709 ALIDE2_RS09760 0e1c7c0307861d7d6ac9bd66f9942f5e 148 Pfam PF07511 Protein of unknown function (DUF1525) 35 145 8.3E-40 T 19-04-2016 IPR011090 Integrating conjugative element protein, PFL4709 ALIDE2_RS10535 ffbc493b4066cd47559e9d69c2506e5a 509 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 4.3E-144 T 19-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane ALIDE2_RS10535 ffbc493b4066cd47559e9d69c2506e5a 509 PANTHER PTHR35342 2 507 8.5E-261 T 19-04-2016 ALIDE2_RS10535 ffbc493b4066cd47559e9d69c2506e5a 509 PANTHER PTHR35342:SF3 2 507 8.5E-261 T 19-04-2016 ALIDE2_RS03150 c55687a19fbabd971a276ea1339b904d 211 SUPERFAMILY SSF48498 100 205 2.53E-5 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS03150 c55687a19fbabd971a276ea1339b904d 211 Gene3D G3DSA:1.10.357.10 18 209 2.3E-38 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS03150 c55687a19fbabd971a276ea1339b904d 211 PANTHER PTHR30055:SF58 12 209 3.7E-56 T 19-04-2016 ALIDE2_RS03150 c55687a19fbabd971a276ea1339b904d 211 PANTHER PTHR30055 12 209 3.7E-56 T 19-04-2016 ALIDE2_RS03150 c55687a19fbabd971a276ea1339b904d 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 74 9.0E-6 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS03150 c55687a19fbabd971a276ea1339b904d 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 43 9.0E-6 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS03150 c55687a19fbabd971a276ea1339b904d 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 74 1.4E-11 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS03150 c55687a19fbabd971a276ea1339b904d 211 SUPERFAMILY SSF46689 17 93 1.33E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS14255 2862bda8eedda57567595daac29c4d5d 367 Pfam PF07995 Glucose / Sorbosone dehydrogenase 33 364 9.9E-132 T 19-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 ALIDE2_RS14255 2862bda8eedda57567595daac29c4d5d 367 SUPERFAMILY SSF50952 22 366 7.98E-47 T 19-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 ALIDE2_RS14255 2862bda8eedda57567595daac29c4d5d 367 PANTHER PTHR19328 26 367 5.3E-54 T 19-04-2016 ALIDE2_RS14255 2862bda8eedda57567595daac29c4d5d 367 Gene3D G3DSA:2.120.10.30 18 367 4.8E-108 T 19-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like ALIDE2_RS08690 16d4509811a2997821e363f1c7b63363 288 PANTHER PTHR13696 1 274 2.6E-36 T 19-04-2016 ALIDE2_RS08690 16d4509811a2997821e363f1c7b63363 288 Pfam PF13614 AAA domain 1 158 3.7E-27 T 19-04-2016 IPR025669 AAA domain ALIDE2_RS08690 16d4509811a2997821e363f1c7b63363 288 Gene3D G3DSA:3.40.50.300 1 267 3.3E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08690 16d4509811a2997821e363f1c7b63363 288 SUPERFAMILY SSF52540 1 265 2.99E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00500 bfbec22f5e1c7ff82a9a9cb41e93c6d5 221 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 68 - T 19-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ALIDE2_RS00500 bfbec22f5e1c7ff82a9a9cb41e93c6d5 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 71 1.6E-14 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS00500 bfbec22f5e1c7ff82a9a9cb41e93c6d5 221 Gene3D G3DSA:1.10.357.10 20 212 2.7E-33 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS00500 bfbec22f5e1c7ff82a9a9cb41e93c6d5 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 1.8E-9 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS00500 bfbec22f5e1c7ff82a9a9cb41e93c6d5 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 1.8E-9 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS00500 bfbec22f5e1c7ff82a9a9cb41e93c6d5 221 SUPERFAMILY SSF48498 89 205 8.9E-5 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS00500 bfbec22f5e1c7ff82a9a9cb41e93c6d5 221 SUPERFAMILY SSF46689 16 88 6.14E-17 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS00500 bfbec22f5e1c7ff82a9a9cb41e93c6d5 221 PANTHER PTHR30055 8 172 4.6E-21 T 19-04-2016 ALIDE2_RS02655 02d5fab833c9254903c11a64721859ff 317 Gene3D G3DSA:1.20.1510.10 21 215 1.2E-44 T 19-04-2016 IPR027469 Cation efflux protein transmembrane domain ALIDE2_RS02655 02d5fab833c9254903c11a64721859ff 317 Gene3D G3DSA:3.30.70.1350 216 301 3.4E-16 T 19-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain ALIDE2_RS02655 02d5fab833c9254903c11a64721859ff 317 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 21 299 7.5E-61 T 19-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ALIDE2_RS02655 02d5fab833c9254903c11a64721859ff 317 SUPERFAMILY SSF160240 220 302 2.75E-12 T 19-04-2016 ALIDE2_RS02655 02d5fab833c9254903c11a64721859ff 317 Pfam PF01545 Cation efflux family 21 215 1.3E-39 T 19-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ALIDE2_RS02655 02d5fab833c9254903c11a64721859ff 317 SUPERFAMILY SSF161111 20 217 1.15E-52 T 19-04-2016 ALIDE2_RS02655 02d5fab833c9254903c11a64721859ff 317 PANTHER PTHR11562 21 309 1.6E-76 T 19-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ALIDE2_RS02655 02d5fab833c9254903c11a64721859ff 317 PANTHER PTHR11562:SF55 21 309 1.6E-76 T 19-04-2016 ALIDE2_RS02655 02d5fab833c9254903c11a64721859ff 317 Pfam PF16916 Dimerisation domain of Zinc Transporter 238 299 5.8E-12 T 19-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain ALIDE2_RS04530 6fe4cdc4756f3320ba55f11c2bc1addb 335 SMART SM00382 32 215 5.3E-13 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS04530 6fe4cdc4756f3320ba55f11c2bc1addb 335 PANTHER PTHR24220 5 293 2.1E-159 T 19-04-2016 ALIDE2_RS04530 6fe4cdc4756f3320ba55f11c2bc1addb 335 Pfam PF00005 ABC transporter 24 165 2.4E-31 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS04530 6fe4cdc4756f3320ba55f11c2bc1addb 335 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS04530 6fe4cdc4756f3320ba55f11c2bc1addb 335 SUPERFAMILY SSF52540 4 246 2.58E-85 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04530 6fe4cdc4756f3320ba55f11c2bc1addb 335 SUPERFAMILY SSF50331 240 334 5.95E-19 T 19-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal ALIDE2_RS04530 6fe4cdc4756f3320ba55f11c2bc1addb 335 Gene3D G3DSA:2.40.50.140 261 318 1.9E-14 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS04530 6fe4cdc4756f3320ba55f11c2bc1addb 335 Pfam PF08402 TOBE domain 258 327 1.4E-6 T 19-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 ALIDE2_RS04530 6fe4cdc4756f3320ba55f11c2bc1addb 335 Gene3D G3DSA:3.40.50.300 3 238 7.8E-76 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04530 6fe4cdc4756f3320ba55f11c2bc1addb 335 PANTHER PTHR24220:SF151 5 293 2.1E-159 T 19-04-2016 ALIDE2_RS07415 80dd2327882db7a08cce7a958b28c6cb 656 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 379 404 2.3E-7 T 19-04-2016 ALIDE2_RS07415 80dd2327882db7a08cce7a958b28c6cb 656 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 463 477 2.3E-7 T 19-04-2016 ALIDE2_RS07415 80dd2327882db7a08cce7a958b28c6cb 656 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 330 2.1E-50 T 19-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ALIDE2_RS07415 80dd2327882db7a08cce7a958b28c6cb 656 PANTHER PTHR22893 8 420 1.0E-91 T 19-04-2016 ALIDE2_RS07415 80dd2327882db7a08cce7a958b28c6cb 656 SUPERFAMILY SSF51905 354 656 1.11E-25 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07415 80dd2327882db7a08cce7a958b28c6cb 656 Gene3D G3DSA:3.20.20.70 4 366 4.3E-95 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS07415 80dd2327882db7a08cce7a958b28c6cb 656 SUPERFAMILY SSF51395 5 357 3.05E-84 T 19-04-2016 ALIDE2_RS07415 80dd2327882db7a08cce7a958b28c6cb 656 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 379 616 1.2E-8 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07415 80dd2327882db7a08cce7a958b28c6cb 656 Gene3D G3DSA:3.40.50.720 374 544 5.8E-35 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS15110 58957b7f1d2e887df432ea70abdbf95e 302 Pfam PF00892 EamA-like transporter family 161 286 3.1E-7 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS15110 58957b7f1d2e887df432ea70abdbf95e 302 Pfam PF00892 EamA-like transporter family 7 137 6.7E-7 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS15110 58957b7f1d2e887df432ea70abdbf95e 302 PANTHER PTHR12715 4 294 1.5E-97 T 19-04-2016 ALIDE2_RS15110 58957b7f1d2e887df432ea70abdbf95e 302 PANTHER PTHR12715:SF7 4 294 1.5E-97 T 19-04-2016 ALIDE2_RS15110 58957b7f1d2e887df432ea70abdbf95e 302 SUPERFAMILY SSF103481 196 291 8.37E-8 T 19-04-2016 ALIDE2_RS12295 2ffdb4937af037b495cd5babfa6b4cd2 400 PANTHER PTHR11751:SF354 12 398 3.0E-126 T 19-04-2016 ALIDE2_RS12295 2ffdb4937af037b495cd5babfa6b4cd2 400 PANTHER PTHR11751 12 398 3.0E-126 T 19-04-2016 ALIDE2_RS12295 2ffdb4937af037b495cd5babfa6b4cd2 400 Pfam PF00155 Aminotransferase class I and II 32 392 3.1E-50 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ALIDE2_RS12295 2ffdb4937af037b495cd5babfa6b4cd2 400 Gene3D G3DSA:3.90.1150.10 262 397 1.7E-27 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS12295 2ffdb4937af037b495cd5babfa6b4cd2 400 Gene3D G3DSA:3.40.640.10 43 261 1.8E-61 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS12295 2ffdb4937af037b495cd5babfa6b4cd2 400 SUPERFAMILY SSF53383 2 397 3.16E-91 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS12295 2ffdb4937af037b495cd5babfa6b4cd2 400 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 396 1.1E-185 T 19-04-2016 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 ALIDE2_RS12485 c58844f6ab1cb7aac9987199fcbc7e67 346 Gene3D G3DSA:3.40.50.2300 175 334 4.7E-52 T 19-04-2016 ALIDE2_RS12485 c58844f6ab1cb7aac9987199fcbc7e67 346 SMART SM00354 4 74 5.3E-19 T 19-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 ALIDE2_RS12485 c58844f6ab1cb7aac9987199fcbc7e67 346 Pfam PF13377 Periplasmic binding protein-like domain 175 333 2.6E-34 T 19-04-2016 ALIDE2_RS12485 c58844f6ab1cb7aac9987199fcbc7e67 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 51 4.8E-13 T 19-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 ALIDE2_RS12485 c58844f6ab1cb7aac9987199fcbc7e67 346 Gene3D G3DSA:3.40.50.2300 64 174 3.4E-27 T 19-04-2016 ALIDE2_RS12485 c58844f6ab1cb7aac9987199fcbc7e67 346 PANTHER PTHR30146 4 342 1.7E-95 T 19-04-2016 ALIDE2_RS12485 c58844f6ab1cb7aac9987199fcbc7e67 346 SUPERFAMILY SSF53822 62 330 8.01E-60 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS12485 c58844f6ab1cb7aac9987199fcbc7e67 346 Gene3D G3DSA:1.10.260.40 5 63 1.1E-20 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS12485 c58844f6ab1cb7aac9987199fcbc7e67 346 SUPERFAMILY SSF47413 5 62 5.06E-15 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS13595 be97d62f0d01598fda37423b26b8979d 287 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 38 263 1.2E-106 T 19-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 ALIDE2_RS13595 be97d62f0d01598fda37423b26b8979d 287 Gene3D G3DSA:3.40.50.300 17 272 2.3E-93 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13595 be97d62f0d01598fda37423b26b8979d 287 SUPERFAMILY SSF52540 67 256 3.04E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13595 be97d62f0d01598fda37423b26b8979d 287 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 37 262 6.1E-95 T 19-04-2016 IPR022488 Polyphosphate kinase-2-related ALIDE2_RS13595 be97d62f0d01598fda37423b26b8979d 287 PANTHER PTHR34383 30 258 7.9E-113 T 19-04-2016 ALIDE2_RS13595 be97d62f0d01598fda37423b26b8979d 287 PIRSF PIRSF028756 3 287 2.9E-105 T 19-04-2016 IPR016898 Polyphosphate kinase 2 ALIDE2_RS13595 be97d62f0d01598fda37423b26b8979d 287 PANTHER PTHR34383:SF1 30 258 7.9E-113 T 19-04-2016 ALIDE2_RS17205 89602f9c6b3f6508b9d8ec338496aca6 298 PANTHER PTHR11741 1 294 1.2E-108 T 19-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 ALIDE2_RS17205 89602f9c6b3f6508b9d8ec338496aca6 298 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 19-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 ALIDE2_RS17205 89602f9c6b3f6508b9d8ec338496aca6 298 SUPERFAMILY SSF46934 3 56 2.68E-13 T 19-04-2016 IPR009060 UBA-like GO:0005515 ALIDE2_RS17205 89602f9c6b3f6508b9d8ec338496aca6 298 Hamap MF_00050 Elongation factor Ts [tsf]. 1 291 75.931 T 19-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 ALIDE2_RS17205 89602f9c6b3f6508b9d8ec338496aca6 298 Gene3D G3DSA:1.10.286.20 194 235 1.2E-19 T 19-04-2016 ALIDE2_RS17205 89602f9c6b3f6508b9d8ec338496aca6 298 Gene3D G3DSA:3.30.479.20 57 149 1.9E-16 T 19-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 ALIDE2_RS17205 89602f9c6b3f6508b9d8ec338496aca6 298 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 291 1.7E-84 T 19-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 ALIDE2_RS17205 89602f9c6b3f6508b9d8ec338496aca6 298 Pfam PF00889 Elongation factor TS 71 274 1.9E-64 T 19-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 ALIDE2_RS17205 89602f9c6b3f6508b9d8ec338496aca6 298 Gene3D G3DSA:3.30.479.20 153 187 7.6E-24 T 19-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 ALIDE2_RS17205 89602f9c6b3f6508b9d8ec338496aca6 298 Gene3D G3DSA:3.30.479.20 236 273 7.6E-24 T 19-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 ALIDE2_RS17205 89602f9c6b3f6508b9d8ec338496aca6 298 SUPERFAMILY SSF54713 153 291 1.03E-45 T 19-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 ALIDE2_RS17205 89602f9c6b3f6508b9d8ec338496aca6 298 Gene3D G3DSA:1.10.8.10 3 55 1.5E-20 T 19-04-2016 ALIDE2_RS17205 89602f9c6b3f6508b9d8ec338496aca6 298 SUPERFAMILY SSF54713 56 148 1.6E-21 T 19-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 ALIDE2_RS07465 658306b56411b3494edbd9eed74058e6 393 PIRSF PIRSF000429 1 391 7.4E-57 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS07465 658306b56411b3494edbd9eed74058e6 393 ProSitePatterns PS00737 Thiolases signature 2. 332 348 - T 19-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 ALIDE2_RS07465 658306b56411b3494edbd9eed74058e6 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 78 96 - T 19-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 ALIDE2_RS07465 658306b56411b3494edbd9eed74058e6 393 SUPERFAMILY SSF53901 20 117 1.32E-46 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS07465 658306b56411b3494edbd9eed74058e6 393 SUPERFAMILY SSF53901 187 389 1.32E-46 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS07465 658306b56411b3494edbd9eed74058e6 393 PANTHER PTHR18919 1 393 7.5E-164 T 19-04-2016 ALIDE2_RS07465 658306b56411b3494edbd9eed74058e6 393 PANTHER PTHR18919:SF83 1 393 7.5E-164 T 19-04-2016 ALIDE2_RS07465 658306b56411b3494edbd9eed74058e6 393 Gene3D G3DSA:3.40.47.10 152 189 2.6E-25 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS07465 658306b56411b3494edbd9eed74058e6 393 Gene3D G3DSA:3.40.47.10 252 388 2.6E-25 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS07465 658306b56411b3494edbd9eed74058e6 393 Pfam PF02803 Thiolase, C-terminal domain 271 366 1.9E-9 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS07465 658306b56411b3494edbd9eed74058e6 393 Gene3D G3DSA:3.40.47.10 208 229 2.5E-22 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS07465 658306b56411b3494edbd9eed74058e6 393 Gene3D G3DSA:3.40.47.10 18 117 2.5E-22 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS07465 658306b56411b3494edbd9eed74058e6 393 Pfam PF00108 Thiolase, N-terminal domain 14 197 5.4E-13 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS14275 23c804a1462f1107bbf5c5ed317bb54d 388 Gene3D G3DSA:1.10.540.10 1 118 1.1E-35 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS14275 23c804a1462f1107bbf5c5ed317bb54d 388 PANTHER PTHR10909 1 380 3.1E-185 T 19-04-2016 ALIDE2_RS14275 23c804a1462f1107bbf5c5ed317bb54d 388 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS14275 23c804a1462f1107bbf5c5ed317bb54d 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 379 1.1E-48 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS14275 23c804a1462f1107bbf5c5ed317bb54d 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 1.3E-25 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS14275 23c804a1462f1107bbf5c5ed317bb54d 388 PANTHER PTHR10909:SF305 1 380 3.1E-185 T 19-04-2016 ALIDE2_RS14275 23c804a1462f1107bbf5c5ed317bb54d 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 2.9E-24 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS14275 23c804a1462f1107bbf5c5ed317bb54d 388 SUPERFAMILY SSF56645 1 242 3.8E-78 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS14275 23c804a1462f1107bbf5c5ed317bb54d 388 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS14275 23c804a1462f1107bbf5c5ed317bb54d 388 SUPERFAMILY SSF47203 228 383 1.61E-60 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS14275 23c804a1462f1107bbf5c5ed317bb54d 388 Gene3D G3DSA:2.40.110.10 121 218 2.5E-40 T 19-04-2016 ALIDE2_RS14275 23c804a1462f1107bbf5c5ed317bb54d 388 Gene3D G3DSA:1.20.140.10 219 380 2.7E-69 T 19-04-2016 ALIDE2_RS08795 b0adb18d5d30708c6f3611c1301e4d97 756 Gene3D G3DSA:3.40.50.300 577 703 7.1E-10 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08795 b0adb18d5d30708c6f3611c1301e4d97 756 PANTHER PTHR10799 345 423 3.1E-16 T 19-04-2016 ALIDE2_RS08795 b0adb18d5d30708c6f3611c1301e4d97 756 PANTHER PTHR10799 468 700 3.1E-16 T 19-04-2016 ALIDE2_RS08795 b0adb18d5d30708c6f3611c1301e4d97 756 PANTHER PTHR10799 66 192 3.1E-16 T 19-04-2016 ALIDE2_RS08795 b0adb18d5d30708c6f3611c1301e4d97 756 SMART SM00487 67 411 1.9E-8 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS08795 b0adb18d5d30708c6f3611c1301e4d97 756 PANTHER PTHR10799:SF573 345 423 3.1E-16 T 19-04-2016 ALIDE2_RS08795 b0adb18d5d30708c6f3611c1301e4d97 756 PANTHER PTHR10799:SF573 468 700 3.1E-16 T 19-04-2016 ALIDE2_RS08795 b0adb18d5d30708c6f3611c1301e4d97 756 PANTHER PTHR10799:SF573 66 192 3.1E-16 T 19-04-2016 ALIDE2_RS08795 b0adb18d5d30708c6f3611c1301e4d97 756 Pfam PF00271 Helicase conserved C-terminal domain 582 693 4.7E-7 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS08795 b0adb18d5d30708c6f3611c1301e4d97 756 SUPERFAMILY SSF52540 569 733 5.45E-28 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08795 b0adb18d5d30708c6f3611c1301e4d97 756 SUPERFAMILY SSF52540 349 391 5.45E-28 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08795 b0adb18d5d30708c6f3611c1301e4d97 756 Gene3D G3DSA:3.40.50.300 343 401 4.2E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08795 b0adb18d5d30708c6f3611c1301e4d97 756 Gene3D G3DSA:3.40.50.300 64 185 4.2E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08795 b0adb18d5d30708c6f3611c1301e4d97 756 SUPERFAMILY SSF52540 68 177 2.26E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08795 b0adb18d5d30708c6f3611c1301e4d97 756 SUPERFAMILY SSF52540 344 410 2.26E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15040 09cdf4325cb4a50195b1ed828c0c3755 418 PANTHER PTHR23151:SF47 3 418 9.1E-209 T 19-04-2016 ALIDE2_RS15040 09cdf4325cb4a50195b1ed828c0c3755 418 Gene3D G3DSA:4.10.320.10 116 155 1.0E-14 T 19-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 ALIDE2_RS15040 09cdf4325cb4a50195b1ed828c0c3755 418 Gene3D G3DSA:3.30.559.10 185 415 4.7E-89 T 19-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain ALIDE2_RS15040 09cdf4325cb4a50195b1ed828c0c3755 418 SUPERFAMILY SSF52777 188 417 9.34E-86 T 19-04-2016 ALIDE2_RS15040 09cdf4325cb4a50195b1ed828c0c3755 418 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 187 415 6.8E-78 T 19-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 ALIDE2_RS15040 09cdf4325cb4a50195b1ed828c0c3755 418 Pfam PF02817 e3 binding domain 116 149 2.4E-10 T 19-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 ALIDE2_RS15040 09cdf4325cb4a50195b1ed828c0c3755 418 SUPERFAMILY SSF51230 2 97 1.26E-27 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS15040 09cdf4325cb4a50195b1ed828c0c3755 418 Pfam PF00364 Biotin-requiring enzyme 5 77 3.7E-21 T 19-04-2016 IPR000089 Biotin/lipoyl attachment ALIDE2_RS15040 09cdf4325cb4a50195b1ed828c0c3755 418 Gene3D G3DSA:2.40.50.100 2 97 9.0E-30 T 19-04-2016 ALIDE2_RS15040 09cdf4325cb4a50195b1ed828c0c3755 418 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 19-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ALIDE2_RS15040 09cdf4325cb4a50195b1ed828c0c3755 418 SUPERFAMILY SSF47005 108 153 3.53E-9 T 19-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 ALIDE2_RS15040 09cdf4325cb4a50195b1ed828c0c3755 418 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 417 6.5E-165 T 19-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 ALIDE2_RS15040 09cdf4325cb4a50195b1ed828c0c3755 418 PANTHER PTHR23151 3 418 9.1E-209 T 19-04-2016 ALIDE2_RS03810 4ca4727b75bbc37d6ebd067b008ea1d4 327 SUPERFAMILY SSF161098 89 304 4.69E-16 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS03810 4ca4727b75bbc37d6ebd067b008ea1d4 327 Gene3D G3DSA:1.10.3720.10 89 312 2.1E-18 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS03810 4ca4727b75bbc37d6ebd067b008ea1d4 327 PANTHER PTHR30465:SF47 1 320 6.1E-146 T 19-04-2016 ALIDE2_RS03810 4ca4727b75bbc37d6ebd067b008ea1d4 327 PANTHER PTHR30465 1 320 6.1E-146 T 19-04-2016 ALIDE2_RS03810 4ca4727b75bbc37d6ebd067b008ea1d4 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 1.1E-40 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18925 01dd7d7c02e0d0d54154306f5c227867 247 SUPERFAMILY SSF88659 131 211 1.01E-14 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS18925 01dd7d7c02e0d0d54154306f5c227867 247 Pfam PF04542 Sigma-70 region 2 47 113 2.5E-14 T 19-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS18925 01dd7d7c02e0d0d54154306f5c227867 247 Gene3D G3DSA:1.10.1740.10 25 130 4.0E-30 T 19-04-2016 ALIDE2_RS18925 01dd7d7c02e0d0d54154306f5c227867 247 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 42 210 1.3E-30 T 19-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS18925 01dd7d7c02e0d0d54154306f5c227867 247 SUPERFAMILY SSF88946 24 127 1.51E-26 T 19-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS18925 01dd7d7c02e0d0d54154306f5c227867 247 PANTHER PTHR30173:SF24 18 229 9.1E-45 T 19-04-2016 ALIDE2_RS18925 01dd7d7c02e0d0d54154306f5c227867 247 Gene3D G3DSA:1.10.10.10 148 211 2.0E-16 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18925 01dd7d7c02e0d0d54154306f5c227867 247 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 68 99 - T 19-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS18925 01dd7d7c02e0d0d54154306f5c227867 247 PANTHER PTHR30173 18 229 9.1E-45 T 19-04-2016 ALIDE2_RS18925 01dd7d7c02e0d0d54154306f5c227867 247 Pfam PF08281 Sigma-70, region 4 154 206 6.6E-12 T 19-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS01480 d7fc9cd3046997784658a001e6f00f2a 327 PANTHER PTHR30349:SF16 4 327 3.1E-81 T 19-04-2016 ALIDE2_RS01480 d7fc9cd3046997784658a001e6f00f2a 327 PANTHER PTHR30349 4 327 3.1E-81 T 19-04-2016 ALIDE2_RS01480 d7fc9cd3046997784658a001e6f00f2a 327 SUPERFAMILY SSF53850 118 287 1.94E-11 T 19-04-2016 ALIDE2_RS01480 d7fc9cd3046997784658a001e6f00f2a 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 322 4.5E-78 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01480 d7fc9cd3046997784658a001e6f00f2a 327 PIRSF PIRSF017082 2 327 5.0E-70 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS09175 76d13802e232cf48347d615df6565662 130 PANTHER PTHR34075 5 119 9.0E-34 T 19-04-2016 ALIDE2_RS09175 76d13802e232cf48347d615df6565662 130 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 21 56 2.2E-12 T 19-04-2016 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal ALIDE2_RS09175 76d13802e232cf48347d615df6565662 130 PANTHER PTHR34075:SF2 5 119 9.0E-34 T 19-04-2016 ALIDE2_RS09175 76d13802e232cf48347d615df6565662 130 SUPERFAMILY SSF50249 6 121 4.45E-37 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS09175 76d13802e232cf48347d615df6565662 130 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 58 116 2.6E-22 T 19-04-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 Gene3D G3DSA:3.50.50.60 330 435 2.6E-31 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PIRSF PIRSF000238 1 521 1.7E-256 T 19-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 Gene3D G3DSA:3.40.30.10 1 94 2.2E-28 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 SUPERFAMILY SSF52833 104 197 1.03E-20 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PANTHER PTHR22912 199 514 3.2E-203 T 19-04-2016 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 4.2E-65 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 4.2E-65 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 4.2E-65 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 4.2E-65 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 4.2E-65 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 4.2E-65 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 4.2E-65 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 4.2E-65 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 478 496 4.2E-65 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 SUPERFAMILY SSF52833 1 102 2.12E-23 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 SUPERFAMILY SSF51905 202 514 4.0E-52 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 Gene3D G3DSA:3.50.50.60 436 516 1.4E-14 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 19-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PANTHER PTHR22912:SF107 199 514 3.2E-203 T 19-04-2016 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 Gene3D G3DSA:3.50.50.60 211 329 4.1E-24 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 502 1.1E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 517 6.4E-237 T 19-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 Gene3D G3DSA:3.40.30.10 103 197 5.2E-34 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 Pfam PF13192 Thioredoxin domain 120 195 1.4E-9 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 1.4E-39 T 19-04-2016 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 1.4E-39 T 19-04-2016 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 1.4E-39 T 19-04-2016 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 1.4E-39 T 19-04-2016 ALIDE2_RS08275 7519441002f7d06b9e26d6e4977982ba 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 1.4E-39 T 19-04-2016 ALIDE2_RS13580 7ee975bcb248e18dad2deec8200e49ca 203 SUPERFAMILY SSF140478 24 180 5.89E-52 T 19-04-2016 IPR023353 LemA-like domain ALIDE2_RS13580 7ee975bcb248e18dad2deec8200e49ca 203 Pfam PF04011 LemA family 6 194 2.7E-62 T 19-04-2016 IPR007156 LemA ALIDE2_RS13580 7ee975bcb248e18dad2deec8200e49ca 203 PANTHER PTHR34478:SF2 1 197 6.4E-81 T 19-04-2016 ALIDE2_RS13580 7ee975bcb248e18dad2deec8200e49ca 203 Gene3D G3DSA:1.20.1440.20 14 194 4.1E-59 T 19-04-2016 IPR023353 LemA-like domain ALIDE2_RS13580 7ee975bcb248e18dad2deec8200e49ca 203 PANTHER PTHR34478 1 197 6.4E-81 T 19-04-2016 ALIDE2_RS19225 037d6c7341c69447c5b240ba8e9e1ef3 169 PANTHER PTHR30353:SF12 1 162 3.3E-34 T 19-04-2016 ALIDE2_RS19225 037d6c7341c69447c5b240ba8e9e1ef3 169 Pfam PF09335 SNARE associated Golgi protein 48 160 4.2E-8 T 19-04-2016 IPR032816 SNARE associated Golgi protein ALIDE2_RS19225 037d6c7341c69447c5b240ba8e9e1ef3 169 PANTHER PTHR30353 1 162 3.3E-34 T 19-04-2016 IPR032818 DedA family ALIDE2_RS21615 d23d85fa278ba36ec0abd883d3a679e5 173 Gene3D G3DSA:3.30.230.10 82 165 4.8E-34 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALIDE2_RS21615 d23d85fa278ba36ec0abd883d3a679e5 173 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 169 1.6E-63 T 19-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS21615 d23d85fa278ba36ec0abd883d3a679e5 173 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 169 33.421 T 19-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS21615 d23d85fa278ba36ec0abd883d3a679e5 173 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 80 6.0E-25 T 19-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21615 d23d85fa278ba36ec0abd883d3a679e5 173 SUPERFAMILY SSF54211 85 165 1.06E-27 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS21615 d23d85fa278ba36ec0abd883d3a679e5 173 Gene3D G3DSA:3.30.160.20 15 79 3.5E-26 T 19-04-2016 IPR014720 Double-stranded RNA-binding domain ALIDE2_RS21615 d23d85fa278ba36ec0abd883d3a679e5 173 PANTHER PTHR13718 15 170 1.6E-66 T 19-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21615 d23d85fa278ba36ec0abd883d3a679e5 173 SUPERFAMILY SSF54768 15 82 2.3E-21 T 19-04-2016 ALIDE2_RS21615 d23d85fa278ba36ec0abd883d3a679e5 173 ProSitePatterns PS00585 Ribosomal protein S5 signature. 34 66 - T 19-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site ALIDE2_RS21615 d23d85fa278ba36ec0abd883d3a679e5 173 Pfam PF03719 Ribosomal protein S5, C-terminal domain 92 163 4.2E-30 T 19-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS07640 798da81e689dbc0c32dee059991a41a7 248 SMART SM00382 37 222 2.6E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS07640 798da81e689dbc0c32dee059991a41a7 248 Gene3D G3DSA:3.40.50.300 11 240 1.5E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07640 798da81e689dbc0c32dee059991a41a7 248 PANTHER PTHR24220:SF568 14 248 1.0E-105 T 19-04-2016 ALIDE2_RS07640 798da81e689dbc0c32dee059991a41a7 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS07640 798da81e689dbc0c32dee059991a41a7 248 Pfam PF00005 ABC transporter 28 173 3.9E-25 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS07640 798da81e689dbc0c32dee059991a41a7 248 SUPERFAMILY SSF52540 12 244 1.7E-55 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07640 798da81e689dbc0c32dee059991a41a7 248 PANTHER PTHR24220 14 248 1.0E-105 T 19-04-2016 ALIDE2_RS10795 e44a391b98c504a96eec4f8098732507 131 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 1.4E-19 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS10795 e44a391b98c504a96eec4f8098732507 131 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 1.4E-19 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS10795 e44a391b98c504a96eec4f8098732507 131 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 1.4E-19 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS10795 e44a391b98c504a96eec4f8098732507 131 Gene3D G3DSA:1.10.1660.10 59 129 8.1E-25 T 19-04-2016 ALIDE2_RS10795 e44a391b98c504a96eec4f8098732507 131 Gene3D G3DSA:1.10.1660.10 4 58 1.8E-24 T 19-04-2016 ALIDE2_RS10795 e44a391b98c504a96eec4f8098732507 131 Pfam PF00376 MerR family regulatory protein 5 42 6.3E-13 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS10795 e44a391b98c504a96eec4f8098732507 131 SUPERFAMILY SSF46955 4 127 9.89E-31 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS10795 e44a391b98c504a96eec4f8098732507 131 PANTHER PTHR30204:SF18 6 113 1.7E-28 T 19-04-2016 ALIDE2_RS10795 e44a391b98c504a96eec4f8098732507 131 SMART SM00422 4 73 1.3E-26 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS10795 e44a391b98c504a96eec4f8098732507 131 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 5 128 1.9E-50 T 19-04-2016 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 ALIDE2_RS10795 e44a391b98c504a96eec4f8098732507 131 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 29 - T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS10795 e44a391b98c504a96eec4f8098732507 131 Pfam PF09278 MerR, DNA binding 47 109 1.2E-18 T 19-04-2016 IPR015358 Transcription regulator MerR, DNA binding ALIDE2_RS10795 e44a391b98c504a96eec4f8098732507 131 PANTHER PTHR30204 6 113 1.7E-28 T 19-04-2016 ALIDE2_RS05505 f4cee5b77f53c4fed965fd4ed6e21402 417 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 417 4.9E-140 T 19-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 ALIDE2_RS05505 f4cee5b77f53c4fed965fd4ed6e21402 417 Gene3D G3DSA:2.40.40.20 137 199 6.1E-4 T 19-04-2016 ALIDE2_RS05505 f4cee5b77f53c4fed965fd4ed6e21402 417 Gene3D G3DSA:2.40.40.20 242 272 6.1E-4 T 19-04-2016 ALIDE2_RS05505 f4cee5b77f53c4fed965fd4ed6e21402 417 Pfam PF12704 MacB-like periplasmic core domain 30 244 4.4E-19 T 19-04-2016 IPR025857 MacB-like periplasmic core domain ALIDE2_RS05505 f4cee5b77f53c4fed965fd4ed6e21402 417 PANTHER PTHR30489:SF8 1 417 6.0E-102 T 19-04-2016 ALIDE2_RS05505 f4cee5b77f53c4fed965fd4ed6e21402 417 PANTHER PTHR30489 1 417 6.0E-102 T 19-04-2016 ALIDE2_RS05505 f4cee5b77f53c4fed965fd4ed6e21402 417 Pfam PF02687 FtsX-like permease family 277 410 1.2E-17 T 19-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 ALIDE2_RS12630 44cfb244ebeb33a20bb9b363eabff13b 345 Gene3D G3DSA:3.40.50.920 205 335 1.4E-42 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS12630 44cfb244ebeb33a20bb9b363eabff13b 345 Pfam PF02779 Transketolase, pyrimidine binding domain 5 178 1.3E-46 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ALIDE2_RS12630 44cfb244ebeb33a20bb9b363eabff13b 345 SUPERFAMILY SSF52922 201 335 2.09E-38 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS12630 44cfb244ebeb33a20bb9b363eabff13b 345 SUPERFAMILY SSF52518 4 214 3.09E-67 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS12630 44cfb244ebeb33a20bb9b363eabff13b 345 Pfam PF02780 Transketolase, C-terminal domain 204 327 2.8E-35 T 19-04-2016 IPR033248 Transketolase, C-terminal domain ALIDE2_RS12630 44cfb244ebeb33a20bb9b363eabff13b 345 PANTHER PTHR11624 3 345 2.3E-142 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS12630 44cfb244ebeb33a20bb9b363eabff13b 345 PANTHER PTHR11624:SF77 3 345 2.3E-142 T 19-04-2016 ALIDE2_RS12630 44cfb244ebeb33a20bb9b363eabff13b 345 Gene3D G3DSA:3.40.50.970 3 204 3.5E-76 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS12630 44cfb244ebeb33a20bb9b363eabff13b 345 SMART SM00861 6 181 4.9E-60 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ALIDE2_RS03330 2e4b47d1811bf0d06cfbf7ce08909aa7 327 PANTHER PTHR30537 27 322 1.5E-69 T 19-04-2016 ALIDE2_RS03330 2e4b47d1811bf0d06cfbf7ce08909aa7 327 PANTHER PTHR30537:SF26 27 322 1.5E-69 T 19-04-2016 ALIDE2_RS03330 2e4b47d1811bf0d06cfbf7ce08909aa7 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 5.0E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS03330 2e4b47d1811bf0d06cfbf7ce08909aa7 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 59 5.0E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS03330 2e4b47d1811bf0d06cfbf7ce08909aa7 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 59 70 5.0E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS03330 2e4b47d1811bf0d06cfbf7ce08909aa7 327 Gene3D G3DSA:3.40.190.10 194 283 1.3E-19 T 19-04-2016 ALIDE2_RS03330 2e4b47d1811bf0d06cfbf7ce08909aa7 327 Gene3D G3DSA:3.40.190.10 111 193 1.1E-26 T 19-04-2016 ALIDE2_RS03330 2e4b47d1811bf0d06cfbf7ce08909aa7 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 81 3.5E-21 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS03330 2e4b47d1811bf0d06cfbf7ce08909aa7 327 SUPERFAMILY SSF46785 22 103 1.36E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS03330 2e4b47d1811bf0d06cfbf7ce08909aa7 327 Gene3D G3DSA:1.10.10.10 24 102 8.6E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS03330 2e4b47d1811bf0d06cfbf7ce08909aa7 327 Pfam PF03466 LysR substrate binding domain 108 313 5.4E-30 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS03330 2e4b47d1811bf0d06cfbf7ce08909aa7 327 SUPERFAMILY SSF53850 108 316 1.15E-31 T 19-04-2016 ALIDE2_RS18305 8cb7c9d69e715141da57db3a9cd11d07 198 SUPERFAMILY SSF56925 39 197 5.23E-21 T 19-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ALIDE2_RS18305 8cb7c9d69e715141da57db3a9cd11d07 198 Gene3D G3DSA:2.40.160.20 38 196 7.1E-32 T 19-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ALIDE2_RS18305 8cb7c9d69e715141da57db3a9cd11d07 198 Pfam PF13505 Outer membrane protein beta-barrel domain 20 198 2.3E-13 T 19-04-2016 IPR027385 Outer membrane protein beta-barrel ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 62 69 - T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 Gene3D G3DSA:3.40.50.1370 160 295 3.8E-50 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 SUPERFAMILY SSF53671 17 318 8.9E-93 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 PANTHER PTHR11405:SF16 8 320 4.3E-125 T 19-04-2016 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 148 159 4.8E-18 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 278 4.8E-18 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 62 81 4.8E-18 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 281 304 4.8E-18 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 168 313 8.5E-25 T 19-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 PANTHER PTHR11405 8 320 4.3E-125 T 19-04-2016 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 90 99 1.8E-27 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 297 311 1.8E-27 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 232 241 1.8E-27 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 147 164 1.8E-27 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 52 74 1.8E-27 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 273 278 1.8E-27 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 15 318 40.529 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 17 315 1.1E-91 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 Gene3D G3DSA:3.40.50.1370 17 159 9.9E-48 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ALIDE2_RS19295 365bbad98a243e771ec4ed2102fbec79 320 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 17 160 5.2E-34 T 19-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 ALIDE2_RS11490 f79add79cb314fc2d696a8fd4cafd868 195 SUPERFAMILY SSF50891 32 193 6.43E-57 T 19-04-2016 IPR029000 Cyclophilin-like domain ALIDE2_RS11490 f79add79cb314fc2d696a8fd4cafd868 195 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 69 86 - T 19-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 ALIDE2_RS11490 f79add79cb314fc2d696a8fd4cafd868 195 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 35 191 6.8E-47 T 19-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 ALIDE2_RS11490 f79add79cb314fc2d696a8fd4cafd868 195 PANTHER PTHR11071 36 194 1.1E-63 T 19-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 ALIDE2_RS11490 f79add79cb314fc2d696a8fd4cafd868 195 PANTHER PTHR11071:SF192 36 194 1.1E-63 T 19-04-2016 ALIDE2_RS11490 f79add79cb314fc2d696a8fd4cafd868 195 Gene3D G3DSA:2.40.100.10 32 194 1.1E-53 T 19-04-2016 IPR029000 Cyclophilin-like domain ALIDE2_RS11490 f79add79cb314fc2d696a8fd4cafd868 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 48 63 1.1E-11 T 19-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 ALIDE2_RS11490 f79add79cb314fc2d696a8fd4cafd868 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 149 164 1.1E-11 T 19-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 ALIDE2_RS11490 f79add79cb314fc2d696a8fd4cafd868 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 74 86 1.1E-11 T 19-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 ALIDE2_RS14615 938a13aa0da091204b97f1215e3f0b55 445 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 11 440 25.844 T 19-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 ALIDE2_RS14615 938a13aa0da091204b97f1215e3f0b55 445 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 16 439 1.4E-125 T 19-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 ALIDE2_RS14615 938a13aa0da091204b97f1215e3f0b55 445 PANTHER PTHR30008 6 444 1.4E-129 T 19-04-2016 ALIDE2_RS14615 938a13aa0da091204b97f1215e3f0b55 445 Pfam PF02601 Exonuclease VII, large subunit 130 437 1.7E-88 T 19-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 ALIDE2_RS14615 938a13aa0da091204b97f1215e3f0b55 445 PANTHER PTHR30008:SF0 6 444 1.4E-129 T 19-04-2016 ALIDE2_RS14615 938a13aa0da091204b97f1215e3f0b55 445 Pfam PF13742 OB-fold nucleic acid binding domain 15 105 4.4E-27 T 19-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 ALIDE2_RS13070 1853925c97935e3e2a30d0e1baefb74c 541 SUPERFAMILY SSF109604 216 295 7.85E-8 T 19-04-2016 ALIDE2_RS13070 1853925c97935e3e2a30d0e1baefb74c 541 Pfam PF01590 GAF domain 27 193 3.1E-14 T 19-04-2016 IPR003018 GAF domain GO:0005515 ALIDE2_RS13070 1853925c97935e3e2a30d0e1baefb74c 541 SMART SM00065 27 203 7.3E-17 T 19-04-2016 IPR003018 GAF domain GO:0005515 ALIDE2_RS13070 1853925c97935e3e2a30d0e1baefb74c 541 Pfam PF01966 HD domain 226 288 1.4E-4 T 19-04-2016 IPR006674 HD domain ALIDE2_RS13070 1853925c97935e3e2a30d0e1baefb74c 541 Gene3D G3DSA:1.10.3210.10 211 289 6.2E-7 T 19-04-2016 IPR006674 HD domain ALIDE2_RS13070 1853925c97935e3e2a30d0e1baefb74c 541 PANTHER PTHR11347:SF82 11 214 2.0E-16 T 19-04-2016 ALIDE2_RS13070 1853925c97935e3e2a30d0e1baefb74c 541 SUPERFAMILY SSF109604 389 513 1.98E-10 T 19-04-2016 ALIDE2_RS13070 1853925c97935e3e2a30d0e1baefb74c 541 PANTHER PTHR11347 11 214 2.0E-16 T 19-04-2016 ALIDE2_RS13070 1853925c97935e3e2a30d0e1baefb74c 541 SUPERFAMILY SSF55781 11 207 1.96E-24 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS13070 1853925c97935e3e2a30d0e1baefb74c 541 Gene3D G3DSA:3.30.450.40 5 206 2.8E-30 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS13070 1853925c97935e3e2a30d0e1baefb74c 541 SMART SM00471 220 484 9.6E-4 T 19-04-2016 IPR003607 HD/PDEase domain ALIDE2_RS13070 1853925c97935e3e2a30d0e1baefb74c 541 Pfam PF13487 HD domain 401 466 5.4E-22 T 19-04-2016 ALIDE2_RS14535 a00c04dbf0db2ea04c0f3fd7fd9fd4fe 196 Pfam PF03922 OmpW family 25 196 6.1E-44 T 19-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 ALIDE2_RS14535 a00c04dbf0db2ea04c0f3fd7fd9fd4fe 196 PANTHER PTHR36920:SF1 1 196 7.0E-54 T 19-04-2016 ALIDE2_RS14535 a00c04dbf0db2ea04c0f3fd7fd9fd4fe 196 PANTHER PTHR36920 1 196 7.0E-54 T 19-04-2016 ALIDE2_RS14535 a00c04dbf0db2ea04c0f3fd7fd9fd4fe 196 SUPERFAMILY SSF56925 24 196 2.88E-31 T 19-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ALIDE2_RS14535 a00c04dbf0db2ea04c0f3fd7fd9fd4fe 196 Gene3D G3DSA:2.40.160.20 23 196 8.5E-56 T 19-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ALIDE2_RS18730 e124ee0b8614bef6a554c07b9c1029d9 152 PANTHER PTHR11803:SF2 1 152 2.1E-42 T 19-04-2016 ALIDE2_RS18730 e124ee0b8614bef6a554c07b9c1029d9 152 SUPERFAMILY SSF55298 1 151 2.83E-50 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ALIDE2_RS18730 e124ee0b8614bef6a554c07b9c1029d9 152 Gene3D G3DSA:3.30.1330.40 2 151 1.3E-58 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ALIDE2_RS18730 e124ee0b8614bef6a554c07b9c1029d9 152 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 9 151 8.5E-26 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ALIDE2_RS18730 e124ee0b8614bef6a554c07b9c1029d9 152 PANTHER PTHR11803 1 152 2.1E-42 T 19-04-2016 IPR006175 YjgF/YER057c/UK114 family ALIDE2_RS05865 7275923ebec202247fecf69c9dfc2866 444 Pfam PF00742 Homoserine dehydrogenase 137 315 6.5E-65 T 19-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 ALIDE2_RS05865 7275923ebec202247fecf69c9dfc2866 444 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 19-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 ALIDE2_RS05865 7275923ebec202247fecf69c9dfc2866 444 SUPERFAMILY SSF55347 137 302 1.5E-52 T 19-04-2016 ALIDE2_RS05865 7275923ebec202247fecf69c9dfc2866 444 Pfam PF01842 ACT domain 358 429 1.8E-11 T 19-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 ALIDE2_RS05865 7275923ebec202247fecf69c9dfc2866 444 PANTHER PTHR21499 4 367 3.5E-129 T 19-04-2016 ALIDE2_RS05865 7275923ebec202247fecf69c9dfc2866 444 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 1.6E-19 T 19-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 ALIDE2_RS05865 7275923ebec202247fecf69c9dfc2866 444 PIRSF PIRSF000098 1 442 2.2E-160 T 19-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 ALIDE2_RS05865 7275923ebec202247fecf69c9dfc2866 444 SUPERFAMILY SSF51735 1 158 5.23E-37 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS05865 7275923ebec202247fecf69c9dfc2866 444 Gene3D G3DSA:3.30.360.10 149 299 1.1E-57 T 19-04-2016 ALIDE2_RS05865 7275923ebec202247fecf69c9dfc2866 444 Gene3D G3DSA:3.40.50.720 1 148 3.7E-50 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS05865 7275923ebec202247fecf69c9dfc2866 444 SUPERFAMILY SSF55021 356 432 3.44E-10 T 19-04-2016 ALIDE2_RS05865 7275923ebec202247fecf69c9dfc2866 444 Gene3D G3DSA:3.30.70.260 357 431 2.4E-9 T 19-04-2016 ALIDE2_RS05865 7275923ebec202247fecf69c9dfc2866 444 PANTHER PTHR21499:SF2 4 367 3.5E-129 T 19-04-2016 ALIDE2_RS19895 292e7703c4571200ebc9db96f225b368 417 PANTHER PTHR11993 3 164 1.8E-245 T 19-04-2016 ALIDE2_RS19895 292e7703c4571200ebc9db96f225b368 417 PANTHER PTHR11993 190 412 1.8E-245 T 19-04-2016 ALIDE2_RS19895 292e7703c4571200ebc9db96f225b368 417 PANTHER PTHR11993:SF10 3 164 1.8E-245 T 19-04-2016 ALIDE2_RS19895 292e7703c4571200ebc9db96f225b368 417 PANTHER PTHR11993:SF10 190 412 1.8E-245 T 19-04-2016 ALIDE2_RS19895 292e7703c4571200ebc9db96f225b368 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 6.4E-182 T 19-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 ALIDE2_RS19895 292e7703c4571200ebc9db96f225b368 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 19-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 ALIDE2_RS19895 292e7703c4571200ebc9db96f225b368 417 Gene3D G3DSA:1.10.645.10 7 256 1.2E-43 T 19-04-2016 IPR029014 NiFe hydrogenase-like ALIDE2_RS19895 292e7703c4571200ebc9db96f225b368 417 Gene3D G3DSA:1.10.645.10 257 407 5.6E-20 T 19-04-2016 IPR029014 NiFe hydrogenase-like ALIDE2_RS19895 292e7703c4571200ebc9db96f225b368 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 3.2E-123 T 19-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 ALIDE2_RS19895 292e7703c4571200ebc9db96f225b368 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 49.777 T 19-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 ALIDE2_RS19895 292e7703c4571200ebc9db96f225b368 417 SUPERFAMILY SSF56762 16 417 3.4E-135 T 19-04-2016 IPR029014 NiFe hydrogenase-like ALIDE2_RS14680 bdbad052117007b37b03384429085eb1 194 Pfam PF02632 BioY family 37 181 2.7E-33 T 19-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 ALIDE2_RS14680 bdbad052117007b37b03384429085eb1 194 PIRSF PIRSF016661 1 188 5.5E-45 T 19-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 ALIDE2_RS14680 bdbad052117007b37b03384429085eb1 194 PANTHER PTHR34295:SF2 13 185 2.4E-47 T 19-04-2016 ALIDE2_RS14680 bdbad052117007b37b03384429085eb1 194 PANTHER PTHR34295 13 185 2.4E-47 T 19-04-2016 ALIDE2_RS00105 b7285c54915f4a6fb93e5c9b243f9514 101 PRINTS PR00112 Acylphosphatase signature 30 55 1.0E-7 T 19-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 ALIDE2_RS00105 b7285c54915f4a6fb93e5c9b243f9514 101 PRINTS PR00112 Acylphosphatase signature 9 24 1.0E-7 T 19-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 ALIDE2_RS00105 b7285c54915f4a6fb93e5c9b243f9514 101 Gene3D G3DSA:3.30.70.100 9 87 1.7E-26 T 19-04-2016 ALIDE2_RS00105 b7285c54915f4a6fb93e5c9b243f9514 101 PANTHER PTHR10029 1 84 6.2E-30 T 19-04-2016 ALIDE2_RS00105 b7285c54915f4a6fb93e5c9b243f9514 101 Pfam PF00708 Acylphosphatase 8 87 2.0E-23 T 19-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 ALIDE2_RS00105 b7285c54915f4a6fb93e5c9b243f9514 101 SUPERFAMILY SSF54975 7 86 2.4E-25 T 19-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 ALIDE2_RS00105 b7285c54915f4a6fb93e5c9b243f9514 101 ProSitePatterns PS00151 Acylphosphatase signature 2. 38 54 - T 19-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 ALIDE2_RS19290 ec5b44f1dfb140d1f02e44532fcd39d0 178 PANTHER PTHR11608 42 148 3.1E-36 T 19-04-2016 ALIDE2_RS19290 ec5b44f1dfb140d1f02e44532fcd39d0 178 Gene3D G3DSA:3.40.50.2020 33 153 3.2E-28 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS19290 ec5b44f1dfb140d1f02e44532fcd39d0 178 SUPERFAMILY SSF53271 24 149 1.09E-26 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS19290 ec5b44f1dfb140d1f02e44532fcd39d0 178 Pfam PF00156 Phosphoribosyl transferase domain 21 147 1.9E-15 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 ALIDE2_RS03405 b3f3b3c01d96bd28dfa489a2ab898bfd 236 SUPERFAMILY SSF46894 128 232 2.04E-31 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS03405 b3f3b3c01d96bd28dfa489a2ab898bfd 236 PANTHER PTHR26402:SF50 5 234 2.6E-91 T 19-04-2016 ALIDE2_RS03405 b3f3b3c01d96bd28dfa489a2ab898bfd 236 SUPERFAMILY SSF52172 3 129 3.56E-39 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS03405 b3f3b3c01d96bd28dfa489a2ab898bfd 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 5.9E-27 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS03405 b3f3b3c01d96bd28dfa489a2ab898bfd 236 Gene3D G3DSA:1.10.10.10 135 234 2.0E-36 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS03405 b3f3b3c01d96bd28dfa489a2ab898bfd 236 Gene3D G3DSA:3.40.50.2300 3 124 2.8E-39 T 19-04-2016 ALIDE2_RS03405 b3f3b3c01d96bd28dfa489a2ab898bfd 236 SMART SM00448 5 116 4.5E-38 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS03405 b3f3b3c01d96bd28dfa489a2ab898bfd 236 SMART SM00862 155 231 3.4E-28 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS03405 b3f3b3c01d96bd28dfa489a2ab898bfd 236 PANTHER PTHR26402 5 234 2.6E-91 T 19-04-2016 ALIDE2_RS03405 b3f3b3c01d96bd28dfa489a2ab898bfd 236 Pfam PF00072 Response regulator receiver domain 7 117 1.2E-23 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 Pfam PF00270 DEAD/DEAH box helicase 21 184 9.8E-16 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 PANTHER PTHR13710:SF81 7 622 1.4E-274 T 19-04-2016 ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 SMART SM00490 250 331 1.0E-25 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 SUPERFAMILY SSF52540 207 462 1.33E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 SMART SM00956 411 524 9.1E-44 T 19-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 Gene3D G3DSA:3.40.50.300 8 205 2.5E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 Pfam PF09382 RQC domain 406 527 2.4E-32 T 19-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 Gene3D G3DSA:1.10.150.80 555 615 2.4E-12 T 19-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 Gene3D G3DSA:3.40.50.300 206 343 3.7E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 Gene3D G3DSA:1.10.10.10 344 526 7.3E-53 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 Pfam PF16124 RecQ zinc-binding 343 404 1.2E-17 T 19-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 SUPERFAMILY SSF47819 549 622 9.38E-20 T 19-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 PANTHER PTHR13710 7 622 1.4E-274 T 19-04-2016 ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 621 4.2E-230 T 19-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 Pfam PF00271 Helicase conserved C-terminal domain 224 331 2.5E-16 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 Pfam PF00570 HRDC domain 557 619 1.8E-20 T 19-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 467 6.2E-153 T 19-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 SMART SM00487 13 217 5.4E-25 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 SUPERFAMILY SSF52540 7 196 1.73E-37 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00570 039f3605e65216870ba4f60247d3ea8a 622 SMART SM00341 550 622 8.4E-9 T 19-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 ALIDE2_RS14910 452376d63ae031908e78839688d0b618 260 Pfam PF00106 short chain dehydrogenase 15 200 1.7E-29 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS14910 452376d63ae031908e78839688d0b618 260 PANTHER PTHR24322 160 192 4.3E-29 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS14910 452376d63ae031908e78839688d0b618 260 PANTHER PTHR24322 17 141 4.3E-29 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS14910 452376d63ae031908e78839688d0b618 260 Gene3D G3DSA:3.40.50.720 12 255 5.5E-45 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS14910 452376d63ae031908e78839688d0b618 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.9E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS14910 452376d63ae031908e78839688d0b618 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.9E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS14910 452376d63ae031908e78839688d0b618 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.9E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS14910 452376d63ae031908e78839688d0b618 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.9E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS14910 452376d63ae031908e78839688d0b618 260 PANTHER PTHR24322:SF639 160 192 4.3E-29 T 19-04-2016 ALIDE2_RS14910 452376d63ae031908e78839688d0b618 260 PANTHER PTHR24322:SF639 17 141 4.3E-29 T 19-04-2016 ALIDE2_RS14910 452376d63ae031908e78839688d0b618 260 SUPERFAMILY SSF51735 7 256 3.36E-49 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS20925 8510a711ac22b87a4096d2342ce749b8 520 SMART SM00962 296 486 6.6E-28 T 19-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 ALIDE2_RS20925 8510a711ac22b87a4096d2342ce749b8 520 SUPERFAMILY SSF52540 291 483 1.53E-25 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20925 8510a711ac22b87a4096d2342ce749b8 520 PANTHER PTHR11564:SF3 202 482 4.2E-49 T 19-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 ALIDE2_RS20925 8510a711ac22b87a4096d2342ce749b8 520 SMART SM00382 295 463 6.3E-5 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS20925 8510a711ac22b87a4096d2342ce749b8 520 Gene3D G3DSA:3.40.50.300 308 483 8.8E-30 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20925 8510a711ac22b87a4096d2342ce749b8 520 PANTHER PTHR11564 202 482 4.2E-49 T 19-04-2016 ALIDE2_RS20925 8510a711ac22b87a4096d2342ce749b8 520 Pfam PF00448 SRP54-type protein, GTPase domain 298 483 4.9E-25 T 19-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 ALIDE2_RS20925 8510a711ac22b87a4096d2342ce749b8 520 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 384 6.6E-73 T 19-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 ALIDE2_RS20925 8510a711ac22b87a4096d2342ce749b8 520 Gene3D G3DSA:1.20.120.140 245 307 6.6E-7 T 19-04-2016 ALIDE2_RS24110 b6c3eba427692f11d1f23b6b17a2ab9a 110 PANTHER PTHR30349 1 94 1.9E-18 T 19-04-2016 ALIDE2_RS24110 b6c3eba427692f11d1f23b6b17a2ab9a 110 SUPERFAMILY SSF56349 3 100 3.53E-18 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS24110 b6c3eba427692f11d1f23b6b17a2ab9a 110 Gene3D G3DSA:1.10.443.10 1 97 3.2E-17 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS24110 b6c3eba427692f11d1f23b6b17a2ab9a 110 PANTHER PTHR30349:SF24 1 94 1.9E-18 T 19-04-2016 ALIDE2_RS24110 b6c3eba427692f11d1f23b6b17a2ab9a 110 Pfam PF00589 Phage integrase family 22 94 4.8E-12 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS22695 cacf669e0bc91be83b4b3784ccaa3f54 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 4.8E-21 T 19-04-2016 ALIDE2_RS22695 cacf669e0bc91be83b4b3784ccaa3f54 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.2E-17 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS22695 cacf669e0bc91be83b4b3784ccaa3f54 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.2E-17 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS22695 cacf669e0bc91be83b4b3784ccaa3f54 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.2E-17 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS22695 cacf669e0bc91be83b4b3784ccaa3f54 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 19-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ALIDE2_RS22695 cacf669e0bc91be83b4b3784ccaa3f54 157 SUPERFAMILY SSF54909 64 153 1.61E-17 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel ALIDE2_RS22695 cacf669e0bc91be83b4b3784ccaa3f54 157 PANTHER PTHR30154 1 155 9.7E-57 T 19-04-2016 ALIDE2_RS22695 cacf669e0bc91be83b4b3784ccaa3f54 157 SUPERFAMILY SSF46785 3 63 1.31E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22695 cacf669e0bc91be83b4b3784ccaa3f54 157 SMART SM00344 4 113 3.7E-42 T 19-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ALIDE2_RS22695 cacf669e0bc91be83b4b3784ccaa3f54 157 Gene3D G3DSA:1.10.10.10 5 55 1.7E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22695 cacf669e0bc91be83b4b3784ccaa3f54 157 PANTHER PTHR30154:SF28 1 155 9.7E-57 T 19-04-2016 ALIDE2_RS22695 cacf669e0bc91be83b4b3784ccaa3f54 157 Gene3D G3DSA:3.30.70.920 57 153 6.3E-23 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ALIDE2_RS22695 cacf669e0bc91be83b4b3784ccaa3f54 157 Pfam PF01037 Lrp/AsnC ligand binding domain 73 142 6.8E-18 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ALIDE2_RS04980 e9f9a9da5dbc17a2c2fe32fc8d7a0892 478 SMART SM00245 173 380 4.7E-62 T 19-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 ALIDE2_RS04980 e9f9a9da5dbc17a2c2fe32fc8d7a0892 478 Gene3D G3DSA:3.30.750.44 58 106 9.2E-10 T 19-04-2016 ALIDE2_RS04980 e9f9a9da5dbc17a2c2fe32fc8d7a0892 478 SUPERFAMILY SSF52096 38 118 4.31E-74 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS04980 e9f9a9da5dbc17a2c2fe32fc8d7a0892 478 SUPERFAMILY SSF52096 192 388 4.31E-74 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS04980 e9f9a9da5dbc17a2c2fe32fc8d7a0892 478 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 53 384 2.2E-98 T 19-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 ALIDE2_RS04980 e9f9a9da5dbc17a2c2fe32fc8d7a0892 478 SMART SM00228 100 171 8.5E-17 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS04980 e9f9a9da5dbc17a2c2fe32fc8d7a0892 478 Gene3D G3DSA:2.30.42.10 107 181 3.5E-30 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS04980 e9f9a9da5dbc17a2c2fe32fc8d7a0892 478 SUPERFAMILY SSF50156 93 183 4.12E-20 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS04980 e9f9a9da5dbc17a2c2fe32fc8d7a0892 478 PANTHER PTHR32060 290 449 3.0E-112 T 19-04-2016 ALIDE2_RS04980 e9f9a9da5dbc17a2c2fe32fc8d7a0892 478 PANTHER PTHR32060 55 271 3.0E-112 T 19-04-2016 ALIDE2_RS04980 e9f9a9da5dbc17a2c2fe32fc8d7a0892 478 Pfam PF03572 Peptidase family S41 199 377 1.0E-49 T 19-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 ALIDE2_RS04980 e9f9a9da5dbc17a2c2fe32fc8d7a0892 478 Gene3D G3DSA:3.90.226.10 439 460 7.3E-64 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS04980 e9f9a9da5dbc17a2c2fe32fc8d7a0892 478 Gene3D G3DSA:3.90.226.10 182 382 7.3E-64 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS04980 e9f9a9da5dbc17a2c2fe32fc8d7a0892 478 Pfam PF13180 PDZ domain 102 179 5.1E-15 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS14805 b70acf3cbd808e8a99b3a250573be5f8 852 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 38 826 1.1E-251 T 19-04-2016 IPR018752 Uncharacterised protein family UPF0753 ALIDE2_RS14805 b70acf3cbd808e8a99b3a250573be5f8 852 PANTHER PTHR38344 32 847 1.4E-214 T 19-04-2016 ALIDE2_RS14805 b70acf3cbd808e8a99b3a250573be5f8 852 PANTHER PTHR38344:SF1 32 847 1.4E-214 T 19-04-2016 ALIDE2_RS14805 b70acf3cbd808e8a99b3a250573be5f8 852 Hamap MF_01871 UPF0753 protein . 32 839 22.621 T 19-04-2016 IPR018752 Uncharacterised protein family UPF0753 ALIDE2_RS01840 dd1e3007fd0ecb7c94d6d162c995a2fd 89 SUPERFAMILY SSF55594 1 87 1.96E-27 T 19-04-2016 IPR000032 Phosphocarrier HPr protein-like ALIDE2_RS01840 dd1e3007fd0ecb7c94d6d162c995a2fd 89 Pfam PF00381 PTS HPr component phosphorylation site 3 81 5.6E-25 T 19-04-2016 IPR000032 Phosphocarrier HPr protein-like ALIDE2_RS01840 dd1e3007fd0ecb7c94d6d162c995a2fd 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 5.5E-12 T 19-04-2016 IPR000032 Phosphocarrier HPr protein-like ALIDE2_RS01840 dd1e3007fd0ecb7c94d6d162c995a2fd 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 5.5E-12 T 19-04-2016 IPR000032 Phosphocarrier HPr protein-like ALIDE2_RS01840 dd1e3007fd0ecb7c94d6d162c995a2fd 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 5.5E-12 T 19-04-2016 IPR000032 Phosphocarrier HPr protein-like ALIDE2_RS01840 dd1e3007fd0ecb7c94d6d162c995a2fd 89 PANTHER PTHR33705 1 89 1.1E-38 T 19-04-2016 ALIDE2_RS01840 dd1e3007fd0ecb7c94d6d162c995a2fd 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 19-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site ALIDE2_RS01840 dd1e3007fd0ecb7c94d6d162c995a2fd 89 Gene3D G3DSA:3.30.1340.10 1 87 1.6E-29 T 19-04-2016 IPR000032 Phosphocarrier HPr protein-like ALIDE2_RS01840 dd1e3007fd0ecb7c94d6d162c995a2fd 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 19-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site ALIDE2_RS01840 dd1e3007fd0ecb7c94d6d162c995a2fd 89 PANTHER PTHR33705:SF2 1 89 1.1E-38 T 19-04-2016 ALIDE2_RS01840 dd1e3007fd0ecb7c94d6d162c995a2fd 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 2.6E-29 T 19-04-2016 IPR000032 Phosphocarrier HPr protein-like ALIDE2_RS04665 a4509732bfe27281f17e6d717510d1b7 218 PANTHER PTHR30086:SF3 3 218 4.6E-49 T 19-04-2016 ALIDE2_RS04665 a4509732bfe27281f17e6d717510d1b7 218 PANTHER PTHR30086 3 218 4.6E-49 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 ALIDE2_RS04665 a4509732bfe27281f17e6d717510d1b7 218 Pfam PF01810 LysE type translocator 16 216 1.0E-35 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 ALIDE2_RS04665 a4509732bfe27281f17e6d717510d1b7 218 PIRSF PIRSF006324 1 218 5.2E-50 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 ALIDE2_RS21775 b8b2b93b3460837aa7942f122e44d775 113 SUPERFAMILY SSF48600 8 96 3.21E-21 T 19-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 ALIDE2_RS21775 b8b2b93b3460837aa7942f122e44d775 113 Pfam PF01817 Chorismate mutase type II 18 95 9.8E-13 T 19-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 ALIDE2_RS21775 b8b2b93b3460837aa7942f122e44d775 113 SMART SM00830 18 97 4.7E-19 T 19-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 ALIDE2_RS21775 b8b2b93b3460837aa7942f122e44d775 113 Gene3D G3DSA:1.20.59.10 6 95 2.9E-13 T 19-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 ALIDE2_RS06835 95a40c3dd241fd281bc9b5b7db58d92d 644 Gene3D G3DSA:2.130.10.10 111 532 3.0E-160 T 19-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ALIDE2_RS06835 95a40c3dd241fd281bc9b5b7db58d92d 644 PANTHER PTHR22888 562 643 3.5E-34 T 19-04-2016 ALIDE2_RS06835 95a40c3dd241fd281bc9b5b7db58d92d 644 TIGRFAM TIGR04244 nitrous_NosZ_RR: nitrous-oxide reductase, TAT-dependent 14 643 0.0 T 19-04-2016 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084|UniPathway: UPA00652 ALIDE2_RS06835 95a40c3dd241fd281bc9b5b7db58d92d 644 Gene3D G3DSA:2.60.40.420 533 642 8.9E-47 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS06835 95a40c3dd241fd281bc9b5b7db58d92d 644 SUPERFAMILY SSF50974 65 522 9.55E-119 T 19-04-2016 IPR011045 Nitrous oxide reductase, N-terminal ALIDE2_RS06835 95a40c3dd241fd281bc9b5b7db58d92d 644 Pfam PF13473 Cupredoxin-like domain 549 626 1.7E-6 T 19-04-2016 IPR028096 EfeO-type cupredoxin-like domain ALIDE2_RS06835 95a40c3dd241fd281bc9b5b7db58d92d 644 PANTHER PTHR22888:SF3 562 643 3.5E-34 T 19-04-2016 ALIDE2_RS06835 95a40c3dd241fd281bc9b5b7db58d92d 644 SUPERFAMILY SSF49503 514 643 4.98E-29 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS22425 faa9a06cfd00de0ed228806d93190301 735 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 80 735 3.0E-108 T 19-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 ALIDE2_RS22425 faa9a06cfd00de0ed228806d93190301 735 Pfam PF00593 TonB dependent receptor 494 732 1.5E-24 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS22425 faa9a06cfd00de0ed228806d93190301 735 Gene3D G3DSA:2.40.170.20 199 735 2.9E-104 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS22425 faa9a06cfd00de0ed228806d93190301 735 PANTHER PTHR32552:SF14 70 735 4.2E-181 T 19-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 ALIDE2_RS22425 faa9a06cfd00de0ed228806d93190301 735 PANTHER PTHR32552:SF14 14 44 4.2E-181 T 19-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 ALIDE2_RS22425 faa9a06cfd00de0ed228806d93190301 735 SUPERFAMILY SSF56935 29 735 7.02E-104 T 19-04-2016 ALIDE2_RS22425 faa9a06cfd00de0ed228806d93190301 735 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 174 3.0E-14 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS22425 faa9a06cfd00de0ed228806d93190301 735 Gene3D G3DSA:2.170.130.10 30 195 6.2E-26 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS22425 faa9a06cfd00de0ed228806d93190301 735 PANTHER PTHR32552 70 735 4.2E-181 T 19-04-2016 ALIDE2_RS22425 faa9a06cfd00de0ed228806d93190301 735 PANTHER PTHR32552 14 44 4.2E-181 T 19-04-2016 ALIDE2_RS10750 728276e8763bf0707b5c7921148ee71a 254 Gene3D G3DSA:1.10.443.10 119 238 2.5E-20 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS10750 728276e8763bf0707b5c7921148ee71a 254 SUPERFAMILY SSF56349 15 238 6.18E-27 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS10750 728276e8763bf0707b5c7921148ee71a 254 Gene3D G3DSA:1.10.150.130 35 100 4.1E-4 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS10750 728276e8763bf0707b5c7921148ee71a 254 PANTHER PTHR30349 38 238 9.5E-22 T 19-04-2016 ALIDE2_RS10750 728276e8763bf0707b5c7921148ee71a 254 Pfam PF00589 Phage integrase family 141 238 4.3E-11 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS10750 728276e8763bf0707b5c7921148ee71a 254 PANTHER PTHR30349:SF5 38 238 9.5E-22 T 19-04-2016 ALIDE2_RS05625 9b17f9eaaf953c02b6b5e7194bf48e70 247 Pfam PF13545 Crp-like helix-turn-helix domain 165 239 1.7E-19 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS05625 9b17f9eaaf953c02b6b5e7194bf48e70 247 Gene3D G3DSA:2.60.120.10 16 167 2.5E-26 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS05625 9b17f9eaaf953c02b6b5e7194bf48e70 247 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 190 206 1.0E-9 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS05625 9b17f9eaaf953c02b6b5e7194bf48e70 247 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 206 221 1.0E-9 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS05625 9b17f9eaaf953c02b6b5e7194bf48e70 247 SUPERFAMILY SSF51206 20 159 1.57E-29 T 19-04-2016 IPR018490 Cyclic nucleotide-binding-like ALIDE2_RS05625 9b17f9eaaf953c02b6b5e7194bf48e70 247 SMART SM00100 27 148 1.1E-12 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS05625 9b17f9eaaf953c02b6b5e7194bf48e70 247 SMART SM00419 184 232 2.3E-14 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS05625 9b17f9eaaf953c02b6b5e7194bf48e70 247 Pfam PF00027 Cyclic nucleotide-binding domain 46 129 5.3E-15 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS05625 9b17f9eaaf953c02b6b5e7194bf48e70 247 PANTHER PTHR24567 17 236 6.6E-64 T 19-04-2016 ALIDE2_RS05625 9b17f9eaaf953c02b6b5e7194bf48e70 247 SUPERFAMILY SSF46785 163 240 1.03E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05625 9b17f9eaaf953c02b6b5e7194bf48e70 247 Gene3D G3DSA:1.10.10.10 168 241 4.8E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05625 9b17f9eaaf953c02b6b5e7194bf48e70 247 PANTHER PTHR24567:SF28 17 236 6.6E-64 T 19-04-2016 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 17 387 5.2E-114 T 19-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 Gene3D G3DSA:3.90.770.10 10 117 4.1E-89 T 19-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 Gene3D G3DSA:3.90.770.10 235 376 4.1E-89 T 19-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 ProSitePatterns PS01192 Hydroxymethylglutaryl-coenzyme A reductases signature 3. 372 385 - T 19-04-2016 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 326 333 - T 19-04-2016 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 Gene3D G3DSA:3.30.70.420 118 220 3.8E-36 T 19-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 SUPERFAMILY SSF55035 112 220 9.68E-32 T 19-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 PANTHER PTHR10572:SF6 11 430 1.7E-159 T 19-04-2016 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 PANTHER PTHR10572 11 430 1.7E-159 T 19-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 ProSitePatterns PS00066 Hydroxymethylglutaryl-coenzyme A reductases signature 1. 177 191 - T 19-04-2016 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 SUPERFAMILY SSF56542 8 120 8.11E-104 T 19-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 SUPERFAMILY SSF56542 230 428 8.11E-104 T 19-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 TIGRFAM TIGR00532 HMG_CoA_R_NAD: hydroxymethylglutaryl-CoA reductase, degradative 5 387 1.7E-128 T 19-04-2016 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type GO:0015936|GO:0016616|GO:0050662 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 51 72 1.3E-7 T 19-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 78 98 1.3E-7 T 19-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 175 193 1.3E-7 T 19-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 ALIDE2_RS20605 a7a1c8606d584d12caf874c1a34335d2 430 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 314 335 1.3E-7 T 19-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 1.7E-52 T 19-04-2016 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 Gene3D G3DSA:3.30.70.870 298 375 9.7E-26 T 19-04-2016 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 PANTHER PTHR23115:SF175 4 379 1.0E-281 T 19-04-2016 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 PANTHER PTHR23115:SF175 403 601 1.0E-281 T 19-04-2016 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 SMART SM00838 404 491 0.0017 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 Gene3D G3DSA:2.40.30.10 194 294 9.3E-22 T 19-04-2016 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 175 6.3E-20 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 PANTHER PTHR23115 4 379 1.0E-281 T 19-04-2016 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 PANTHER PTHR23115 403 601 1.0E-281 T 19-04-2016 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 Hamap MF_00071 Elongation factor 4 [lepA]. 1 602 305.617 T 19-04-2016 IPR006297 Elongation factor 4 GO:0005525 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 Pfam PF06421 GTP-binding protein LepA C-terminus 493 599 7.7E-49 T 19-04-2016 IPR013842 GTP-binding protein LepA, C-terminal ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 TIGRFAM TIGR01393 lepA: elongation factor 4 3 601 7.8E-296 T 19-04-2016 IPR006297 Elongation factor 4 GO:0005525 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 SUPERFAMILY SSF50447 182 279 1.17E-19 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 Pfam PF00679 Elongation factor G C-terminus 405 490 1.0E-22 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.5E-14 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.5E-14 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.5E-14 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.5E-14 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.5E-14 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 Gene3D G3DSA:3.30.70.240 407 495 8.2E-22 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 SUPERFAMILY SSF54980 405 499 4.27E-26 T 19-04-2016 IPR009022 Elongation factor G, III-V domain ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 Gene3D G3DSA:3.40.50.300 2 193 2.1E-60 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.6E-8 T 19-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 SUPERFAMILY SSF52540 2 205 3.01E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 19-04-2016 IPR031157 Tr-type G domain, conserved site ALIDE2_RS06340 665a202b41136cab37cabb317f071e97 602 SUPERFAMILY SSF54980 298 376 2.12E-18 T 19-04-2016 IPR009022 Elongation factor G, III-V domain ALIDE2_RS14990 7d95c1db69b3dc8ce9e57556b0c27f0a 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 15 60 8.0E-14 T 19-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 ALIDE2_RS14990 7d95c1db69b3dc8ce9e57556b0c27f0a 341 Gene3D G3DSA:3.40.50.2300 64 186 3.3E-30 T 19-04-2016 ALIDE2_RS14990 7d95c1db69b3dc8ce9e57556b0c27f0a 341 SUPERFAMILY SSF53822 70 327 1.5E-48 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS14990 7d95c1db69b3dc8ce9e57556b0c27f0a 341 Gene3D G3DSA:1.10.260.40 13 63 2.6E-21 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS14990 7d95c1db69b3dc8ce9e57556b0c27f0a 341 SUPERFAMILY SSF47413 13 71 4.38E-16 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS14990 7d95c1db69b3dc8ce9e57556b0c27f0a 341 PANTHER PTHR30146:SF2 13 341 6.3E-125 T 19-04-2016 ALIDE2_RS14990 7d95c1db69b3dc8ce9e57556b0c27f0a 341 SMART SM00354 13 83 3.2E-20 T 19-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 ALIDE2_RS14990 7d95c1db69b3dc8ce9e57556b0c27f0a 341 PANTHER PTHR30146 13 341 6.3E-125 T 19-04-2016 ALIDE2_RS14990 7d95c1db69b3dc8ce9e57556b0c27f0a 341 Pfam PF13377 Periplasmic binding protein-like domain 180 341 9.6E-31 T 19-04-2016 ALIDE2_RS14990 7d95c1db69b3dc8ce9e57556b0c27f0a 341 Gene3D G3DSA:3.40.50.2300 187 318 2.4E-36 T 19-04-2016 ALIDE2_RS16105 0a958f8caeab2a77144853bb57d77253 231 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS16105 0a958f8caeab2a77144853bb57d77253 231 Gene3D G3DSA:3.40.50.300 1 222 1.3E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16105 0a958f8caeab2a77144853bb57d77253 231 PANTHER PTHR24220 3 231 4.6E-86 T 19-04-2016 ALIDE2_RS16105 0a958f8caeab2a77144853bb57d77253 231 SUPERFAMILY SSF52540 2 223 2.77E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16105 0a958f8caeab2a77144853bb57d77253 231 SMART SM00382 26 208 6.8E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS16105 0a958f8caeab2a77144853bb57d77253 231 Pfam PF00005 ABC transporter 17 159 2.9E-27 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS16105 0a958f8caeab2a77144853bb57d77253 231 PANTHER PTHR24220:SF568 3 231 4.6E-86 T 19-04-2016 ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 SUPERFAMILY SSF47781 491 579 1.11E-26 T 19-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 SUPERFAMILY SSF47781 581 653 1.09E-18 T 19-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 PANTHER PTHR10724:SF1 1 780 0.0 T 19-04-2016 ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 SMART SM00316 670 741 1.1E-26 T 19-04-2016 IPR022967 RNA-binding domain, S1 ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 SUPERFAMILY SSF158832 1 331 1.14E-104 T 19-04-2016 ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 Pfam PF09371 Tex-like protein N-terminal domain 8 200 3.3E-64 T 19-04-2016 IPR018974 Tex-like protein, N-terminal ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 SMART SM00732 336 445 4.5E-33 T 19-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 SUPERFAMILY SSF50249 659 742 1.72E-24 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 Gene3D G3DSA:3.30.420.140 336 471 1.4E-47 T 19-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 Pfam PF12836 Helix-hairpin-helix motif 512 576 6.8E-26 T 19-04-2016 ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 Gene3D G3DSA:1.10.10.650 1 108 2.8E-43 T 19-04-2016 IPR023319 Tex-like protein, HTH domain ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 Gene3D G3DSA:1.10.150.310 520 651 2.9E-44 T 19-04-2016 IPR023097 Tex RuvX-like domain ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 Pfam PF16921 Tex protein YqgF-like domain 336 472 1.5E-48 T 19-04-2016 IPR032639 Tex protein, YqgF-like domain ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 PANTHER PTHR10724 1 780 0.0 T 19-04-2016 ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 Gene3D G3DSA:2.40.50.140 660 741 1.7E-28 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 Pfam PF00575 S1 RNA binding domain 669 741 1.5E-22 T 19-04-2016 IPR003029 S1 domain GO:0003676 ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 SUPERFAMILY SSF53098 332 490 9.86E-49 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 Gene3D G3DSA:1.10.3500.10 472 519 1.6E-94 T 19-04-2016 IPR023323 Tex-like domain ALIDE2_RS15970 f3f48cffd074e95c14edb04b85c6acaf 794 Gene3D G3DSA:1.10.3500.10 109 332 1.6E-94 T 19-04-2016 IPR023323 Tex-like domain ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 SUPERFAMILY SSF82693 288 343 1.57E-9 T 19-04-2016 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 SUPERFAMILY SSF82693 152 194 1.57E-9 T 19-04-2016 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 SUPERFAMILY SSF82714 746 829 2.62E-11 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 Gene3D G3DSA:1.10.3850.10 835 1065 1.9E-67 T 19-04-2016 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 SUPERFAMILY SSF82693 50 141 2.28E-17 T 19-04-2016 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 Pfam PF00873 AcrB/AcrD/AcrF family 23 1061 1.9E-152 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 PANTHER PTHR32063:SF16 12 1069 0.0 T 19-04-2016 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 Gene3D G3DSA:3.30.70.1430 586 694 3.4E-12 T 19-04-2016 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 Gene3D G3DSA:3.30.70.1430 50 152 4.0E-17 T 19-04-2016 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 SUPERFAMILY SSF82693 581 695 4.71E-12 T 19-04-2016 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 Gene3D G3DSA:1.20.1640.10 305 515 2.8E-44 T 19-04-2016 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 SUPERFAMILY SSF82714 195 277 5.62E-16 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 SUPERFAMILY SSF82866 310 512 1.96E-36 T 19-04-2016 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 PRINTS PR00702 Acriflavin resistance protein family signature 405 429 6.7E-27 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 PRINTS PR00702 Acriflavin resistance protein family signature 48 66 6.7E-27 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 PRINTS PR00702 Acriflavin resistance protein family signature 485 508 6.7E-27 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 6.7E-27 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 PRINTS PR00702 Acriflavin resistance protein family signature 351 374 6.7E-27 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 PRINTS PR00702 Acriflavin resistance protein family signature 20 44 6.7E-27 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 SUPERFAMILY SSF82866 834 1065 4.97E-40 T 19-04-2016 ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 Gene3D G3DSA:3.30.2090.10 747 828 2.7E-9 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 Gene3D G3DSA:3.30.2090.10 195 277 1.8E-16 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS12445 3a5016c3012401fd5f92108cea743db7 1077 PANTHER PTHR32063 12 1069 0.0 T 19-04-2016 ALIDE2_RS05825 902b841bbb599f7d9c705be622d30fb6 249 Gene3D G3DSA:3.40.50.620 1 247 5.3E-105 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS05825 902b841bbb599f7d9c705be622d30fb6 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 19-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 ALIDE2_RS05825 902b841bbb599f7d9c705be622d30fb6 249 SMART SM00893 23 211 4.7E-68 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS05825 902b841bbb599f7d9c705be622d30fb6 249 PANTHER PTHR21294 1 249 3.7E-156 T 19-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 ALIDE2_RS05825 902b841bbb599f7d9c705be622d30fb6 249 Pfam PF01012 Electron transfer flavoprotein domain 28 206 1.5E-46 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS05825 902b841bbb599f7d9c705be622d30fb6 249 PIRSF PIRSF000090 1 249 1.4E-85 T 19-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 ALIDE2_RS05825 902b841bbb599f7d9c705be622d30fb6 249 SUPERFAMILY SSF52402 1 242 3.84E-86 T 19-04-2016 ALIDE2_RS05825 902b841bbb599f7d9c705be622d30fb6 249 PANTHER PTHR21294:SF8 1 249 3.7E-156 T 19-04-2016 ALIDE2_RS06820 899794ac27ae058e0c72548e1f297b4b 310 SMART SM00382 37 217 4.9E-16 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS06820 899794ac27ae058e0c72548e1f297b4b 310 PANTHER PTHR24220:SF595 286 305 3.7E-94 T 19-04-2016 ALIDE2_RS06820 899794ac27ae058e0c72548e1f297b4b 310 PANTHER PTHR24220 286 305 3.7E-94 T 19-04-2016 ALIDE2_RS06820 899794ac27ae058e0c72548e1f297b4b 310 SUPERFAMILY SSF52540 12 231 1.62E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06820 899794ac27ae058e0c72548e1f297b4b 310 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS06820 899794ac27ae058e0c72548e1f297b4b 310 PANTHER PTHR24220:SF595 14 246 3.7E-94 T 19-04-2016 ALIDE2_RS06820 899794ac27ae058e0c72548e1f297b4b 310 Pfam PF00005 ABC transporter 29 169 5.9E-30 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS06820 899794ac27ae058e0c72548e1f297b4b 310 Gene3D G3DSA:3.40.50.300 6 237 1.1E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06820 899794ac27ae058e0c72548e1f297b4b 310 PANTHER PTHR24220 14 246 3.7E-94 T 19-04-2016 ALIDE2_RS20050 0be8d99388a8bd3f675e9dac0dac000a 615 PANTHER PTHR30557:SF1 123 153 0.0 T 19-04-2016 ALIDE2_RS20050 0be8d99388a8bd3f675e9dac0dac000a 615 PANTHER PTHR30557:SF1 15 83 0.0 T 19-04-2016 ALIDE2_RS20050 0be8d99388a8bd3f675e9dac0dac000a 615 PANTHER PTHR30557:SF1 185 611 0.0 T 19-04-2016 ALIDE2_RS20050 0be8d99388a8bd3f675e9dac0dac000a 615 Pfam PF01964 Radical SAM ThiC family 131 583 1.5E-200 T 19-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 ALIDE2_RS20050 0be8d99388a8bd3f675e9dac0dac000a 615 Pfam PF13667 ThiC-associated domain 17 85 1.5E-23 T 19-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 ALIDE2_RS20050 0be8d99388a8bd3f675e9dac0dac000a 615 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 130 585 4.1E-214 T 19-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 ALIDE2_RS20050 0be8d99388a8bd3f675e9dac0dac000a 615 PANTHER PTHR30557 123 153 0.0 T 19-04-2016 ALIDE2_RS20050 0be8d99388a8bd3f675e9dac0dac000a 615 PANTHER PTHR30557 15 83 0.0 T 19-04-2016 ALIDE2_RS20050 0be8d99388a8bd3f675e9dac0dac000a 615 PANTHER PTHR30557 185 611 0.0 T 19-04-2016 ALIDE2_RS20050 0be8d99388a8bd3f675e9dac0dac000a 615 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 130 588 56.418 T 19-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 ALIDE2_RS12600 e62ceaa05d88bf939703adb3855e8766 291 Gene3D G3DSA:3.40.50.1820 3 258 4.7E-49 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS12600 e62ceaa05d88bf939703adb3855e8766 291 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 9.1E-7 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS12600 e62ceaa05d88bf939703adb3855e8766 291 PRINTS PR00111 Alpha/beta hydrolase fold signature 41 56 9.1E-7 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS12600 e62ceaa05d88bf939703adb3855e8766 291 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 9.1E-7 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS12600 e62ceaa05d88bf939703adb3855e8766 291 Pfam PF12697 Alpha/beta hydrolase family 18 251 2.1E-18 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS12600 e62ceaa05d88bf939703adb3855e8766 291 PANTHER PTHR10992 1 259 3.3E-65 T 19-04-2016 ALIDE2_RS12600 e62ceaa05d88bf939703adb3855e8766 291 PANTHER PTHR10992:SF768 1 259 3.3E-65 T 19-04-2016 ALIDE2_RS12600 e62ceaa05d88bf939703adb3855e8766 291 SUPERFAMILY SSF53474 3 258 7.91E-48 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS05650 563860179ee4161cedfb2e01b6f354de 118 SUPERFAMILY SSF102829 3 67 3.4E-17 T 19-04-2016 IPR007838 Cell division protein ZapA-like ALIDE2_RS05650 563860179ee4161cedfb2e01b6f354de 118 Pfam PF05164 Cell division protein ZapA 4 103 4.1E-20 T 19-04-2016 IPR007838 Cell division protein ZapA-like ALIDE2_RS00920 5acac8c1f3dcfa057ff8cff2447717f0 406 PANTHER PTHR24023 1 393 2.4E-32 T 19-04-2016 ALIDE2_RS00920 5acac8c1f3dcfa057ff8cff2447717f0 406 SUPERFAMILY SSF89796 4 406 6.8E-133 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00920 5acac8c1f3dcfa057ff8cff2447717f0 406 PANTHER PTHR24023:SF593 1 393 2.4E-32 T 19-04-2016 ALIDE2_RS00920 5acac8c1f3dcfa057ff8cff2447717f0 406 Gene3D G3DSA:3.40.50.10540 316 406 4.8E-110 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00920 5acac8c1f3dcfa057ff8cff2447717f0 406 Gene3D G3DSA:3.40.50.10540 3 227 4.8E-110 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00920 5acac8c1f3dcfa057ff8cff2447717f0 406 Gene3D G3DSA:3.30.1540.10 233 315 4.3E-31 T 19-04-2016 ALIDE2_RS00920 5acac8c1f3dcfa057ff8cff2447717f0 406 Pfam PF02515 CoA-transferase family III 5 381 3.6E-125 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 SUPERFAMILY SSF51905 316 457 6.77E-52 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 SUPERFAMILY SSF51905 100 149 6.77E-52 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 SUPERFAMILY SSF51905 197 289 6.77E-52 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 Pfam PF00403 Heavy-metal-associated domain 3 43 8.4E-10 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 PIRSF PIRSF000350 1 561 3.0E-265 T 19-04-2016 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 PRINTS PR00945 Mercuric reductase class II signature 237 254 2.5E-92 T 19-04-2016 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 PRINTS PR00945 Mercuric reductase class II signature 145 164 2.5E-92 T 19-04-2016 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 PRINTS PR00945 Mercuric reductase class II signature 292 307 2.5E-92 T 19-04-2016 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 PRINTS PR00945 Mercuric reductase class II signature 13 23 2.5E-92 T 19-04-2016 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 PRINTS PR00945 Mercuric reductase class II signature 272 289 2.5E-92 T 19-04-2016 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 PRINTS PR00945 Mercuric reductase class II signature 469 489 2.5E-92 T 19-04-2016 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 PRINTS PR00945 Mercuric reductase class II signature 110 128 2.5E-92 T 19-04-2016 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 PRINTS PR00945 Mercuric reductase class II signature 534 553 2.5E-92 T 19-04-2016 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 SUPERFAMILY SSF55424 436 559 1.89E-33 T 19-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 Gene3D G3DSA:3.50.50.60 100 236 1.2E-31 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 PANTHER PTHR22912:SF29 81 549 9.1E-128 T 19-04-2016 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 TIGRFAM TIGR02053 MerA: mercury(II) reductase 100 561 6.3E-188 T 19-04-2016 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 Gene3D G3DSA:3.30.70.100 2 68 2.3E-21 T 19-04-2016 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 437 545 6.2E-30 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 PANTHER PTHR22912 81 549 9.1E-128 T 19-04-2016 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 Gene3D G3DSA:3.50.50.60 237 427 1.2E-51 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 100 418 2.9E-64 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 Gene3D G3DSA:3.30.390.30 432 549 9.6E-39 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ALIDE2_RS09725 5934848b66767e81e9d734e5feee1e03 561 SUPERFAMILY SSF55008 2 70 2.62E-17 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS01770 5c1ab70fb31d095762274c301b91ea79 104 SUPERFAMILY SSF54189 8 96 1.04E-28 T 19-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01770 5c1ab70fb31d095762274c301b91ea79 104 Gene3D G3DSA:3.30.70.330 10 101 1.4E-30 T 19-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 ALIDE2_RS01770 5c1ab70fb31d095762274c301b91ea79 104 PANTHER PTHR11620 12 99 6.2E-20 T 19-04-2016 ALIDE2_RS01770 5c1ab70fb31d095762274c301b91ea79 104 Pfam PF00276 Ribosomal protein L23 13 98 1.3E-26 T 19-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01770 5c1ab70fb31d095762274c301b91ea79 104 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 12 102 21.346 T 19-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS18150 d9b8f4866e4e10fdac543babaf46a611 243 SUPERFAMILY SSF51206 23 160 8.12E-30 T 19-04-2016 IPR018490 Cyclic nucleotide-binding-like ALIDE2_RS18150 d9b8f4866e4e10fdac543babaf46a611 243 Pfam PF00027 Cyclic nucleotide-binding domain 50 135 2.5E-15 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS18150 d9b8f4866e4e10fdac543babaf46a611 243 Gene3D G3DSA:2.60.120.10 25 161 7.3E-27 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS18150 d9b8f4866e4e10fdac543babaf46a611 243 SMART SM00100 28 147 2.5E-18 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS18150 d9b8f4866e4e10fdac543babaf46a611 243 PANTHER PTHR24567 17 236 9.2E-42 T 19-04-2016 ALIDE2_RS18150 d9b8f4866e4e10fdac543babaf46a611 243 Gene3D G3DSA:1.10.10.10 166 236 8.8E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18150 d9b8f4866e4e10fdac543babaf46a611 243 Pfam PF13545 Crp-like helix-turn-helix domain 167 235 3.6E-15 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS18150 d9b8f4866e4e10fdac543babaf46a611 243 PANTHER PTHR24567:SF30 17 236 9.2E-42 T 19-04-2016 ALIDE2_RS18150 d9b8f4866e4e10fdac543babaf46a611 243 SUPERFAMILY SSF46785 165 236 7.12E-13 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18150 d9b8f4866e4e10fdac543babaf46a611 243 SMART SM00419 180 228 1.9E-5 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS17170 d41d3bb9326c81333820b718936307c5 765 PANTHER PTHR12815:SF11 13 765 2.4E-228 T 19-04-2016 ALIDE2_RS17170 d41d3bb9326c81333820b718936307c5 765 Pfam PF01103 Surface antigen 456 765 3.0E-76 T 19-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 ALIDE2_RS17170 d41d3bb9326c81333820b718936307c5 765 Pfam PF07244 Surface antigen variable number repeat 274 348 1.0E-9 T 19-04-2016 IPR010827 Surface antigen variable number GO:0019867 ALIDE2_RS17170 d41d3bb9326c81333820b718936307c5 765 Pfam PF07244 Surface antigen variable number repeat 100 180 2.6E-12 T 19-04-2016 IPR010827 Surface antigen variable number GO:0019867 ALIDE2_RS17170 d41d3bb9326c81333820b718936307c5 765 Pfam PF07244 Surface antigen variable number repeat 356 429 3.4E-13 T 19-04-2016 IPR010827 Surface antigen variable number GO:0019867 ALIDE2_RS17170 d41d3bb9326c81333820b718936307c5 765 Pfam PF07244 Surface antigen variable number repeat 184 271 1.7E-16 T 19-04-2016 IPR010827 Surface antigen variable number GO:0019867 ALIDE2_RS17170 d41d3bb9326c81333820b718936307c5 765 Gene3D G3DSA:2.40.160.50 421 765 1.0E-25 T 19-04-2016 ALIDE2_RS17170 d41d3bb9326c81333820b718936307c5 765 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 10 765 24.284 T 19-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 ALIDE2_RS17170 d41d3bb9326c81333820b718936307c5 765 PANTHER PTHR12815 13 765 2.4E-228 T 19-04-2016 ALIDE2_RS17170 d41d3bb9326c81333820b718936307c5 765 PIRSF PIRSF006076 2 765 3.0E-242 T 19-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 ALIDE2_RS17170 d41d3bb9326c81333820b718936307c5 765 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 32 765 4.3E-259 T 19-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 427 584 5.8E-47 T 19-04-2016 IPR001162 UvrC family homology region ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 Pfam PF01541 GIY-YIG catalytic domain 21 95 3.8E-10 T 19-04-2016 IPR000305 GIY-YIG nuclease superfamily ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 SUPERFAMILY SSF47781 563 652 2.07E-18 T 19-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 Gene3D G3DSA:3.40.1440.10 20 99 1.7E-7 T 19-04-2016 IPR027299 GIY-YIG domain ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 Gene3D G3DSA:1.10.150.20 599 651 8.7E-21 T 19-04-2016 ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 PANTHER PTHR30562 3 651 2.9E-215 T 19-04-2016 ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 11 632 1.7E-151 T 19-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 Pfam PF02151 UvrB/uvrC motif 218 250 9.8E-8 T 19-04-2016 IPR001943 UVR domain GO:0005515 ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 Hamap MF_00203 UvrABC system protein C [uvrC]. 6 650 26.389 T 19-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 SUPERFAMILY SSF82771 19 102 4.18E-20 T 19-04-2016 IPR000305 GIY-YIG nuclease superfamily ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 PANTHER PTHR30562:SF1 3 651 2.9E-215 T 19-04-2016 ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 SUPERFAMILY SSF46600 205 256 6.28E-12 T 19-04-2016 IPR001943 UVR domain GO:0005515 ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 Pfam PF14520 Helix-hairpin-helix domain 601 652 1.4E-6 T 19-04-2016 ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 Gene3D G3DSA:4.10.860.10 196 257 1.1E-17 T 19-04-2016 IPR001943 UVR domain GO:0005515 ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 SMART SM00465 19 100 2.0E-17 T 19-04-2016 IPR000305 GIY-YIG nuclease superfamily ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 SMART SM00278 599 618 2.1 T 19-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ALIDE2_RS08100 3147190ca57f4b4ad917465657c3a159 652 SMART SM00278 631 650 170.0 T 19-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ALIDE2_RS06385 518da121a2d1e56acc4148baf9d1a2de 353 Pfam PF00365 Phosphofructokinase 2 302 6.4E-94 T 19-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS06385 518da121a2d1e56acc4148baf9d1a2de 353 Gene3D G3DSA:3.40.50.450 1 217 4.7E-67 T 19-04-2016 ALIDE2_RS06385 518da121a2d1e56acc4148baf9d1a2de 353 PANTHER PTHR13697 1 339 1.3E-107 T 19-04-2016 ALIDE2_RS06385 518da121a2d1e56acc4148baf9d1a2de 353 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 1 352 38.513 T 19-04-2016 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 ALIDE2_RS06385 518da121a2d1e56acc4148baf9d1a2de 353 SUPERFAMILY SSF53784 1 344 3.4E-111 T 19-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS06385 518da121a2d1e56acc4148baf9d1a2de 353 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 126 143 4.0E-59 T 19-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS06385 518da121a2d1e56acc4148baf9d1a2de 353 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 99 115 4.0E-59 T 19-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS06385 518da121a2d1e56acc4148baf9d1a2de 353 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 267 289 4.0E-59 T 19-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS06385 518da121a2d1e56acc4148baf9d1a2de 353 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 164 180 4.0E-59 T 19-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS06385 518da121a2d1e56acc4148baf9d1a2de 353 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 182 199 4.0E-59 T 19-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS06385 518da121a2d1e56acc4148baf9d1a2de 353 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 217 229 4.0E-59 T 19-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS06385 518da121a2d1e56acc4148baf9d1a2de 353 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 144 162 4.0E-59 T 19-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS06385 518da121a2d1e56acc4148baf9d1a2de 353 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 5 24 4.0E-59 T 19-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS06385 518da121a2d1e56acc4148baf9d1a2de 353 PIRSF PIRSF000532 1 353 4.9E-109 T 19-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 ALIDE2_RS00775 80e24a142520f0038ec73aa533c102d7 264 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS00775 80e24a142520f0038ec73aa533c102d7 264 Gene3D G3DSA:3.90.226.10 2 259 1.7E-74 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS00775 80e24a142520f0038ec73aa533c102d7 264 PANTHER PTHR11941 6 261 2.6E-72 T 19-04-2016 ALIDE2_RS00775 80e24a142520f0038ec73aa533c102d7 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 259 6.8E-57 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS00775 80e24a142520f0038ec73aa533c102d7 264 SUPERFAMILY SSF52096 2 260 2.05E-75 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS20615 a2a682f2bc345fee9ca23b898fd43a65 679 Gene3D G3DSA:3.30.70.270 483 659 1.3E-50 T 19-04-2016 ALIDE2_RS20615 a2a682f2bc345fee9ca23b898fd43a65 679 PANTHER PTHR10799:SF750 367 656 3.3E-30 T 19-04-2016 ALIDE2_RS20615 a2a682f2bc345fee9ca23b898fd43a65 679 SUPERFAMILY SSF55785 355 465 3.14E-13 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS20615 a2a682f2bc345fee9ca23b898fd43a65 679 PANTHER PTHR10799 367 656 3.3E-30 T 19-04-2016 ALIDE2_RS20615 a2a682f2bc345fee9ca23b898fd43a65 679 Pfam PF08447 PAS fold 376 457 3.6E-9 T 19-04-2016 IPR013655 PAS fold-3 GO:0005515 ALIDE2_RS20615 a2a682f2bc345fee9ca23b898fd43a65 679 Gene3D G3DSA:3.30.450.20 339 481 1.1E-18 T 19-04-2016 ALIDE2_RS20615 a2a682f2bc345fee9ca23b898fd43a65 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 477 656 1.6E-45 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS20615 a2a682f2bc345fee9ca23b898fd43a65 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 348 470 4.2E-9 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS20615 a2a682f2bc345fee9ca23b898fd43a65 679 SUPERFAMILY SSF55073 486 658 1.33E-42 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS20615 a2a682f2bc345fee9ca23b898fd43a65 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 483 653 1.5E-43 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS20615 a2a682f2bc345fee9ca23b898fd43a65 679 SMART SM00267 470 657 2.4E-59 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS02490 e8a24d6154208cb682d79c64daaf1cca 437 Gene3D G3DSA:3.40.50.2300 37 233 2.5E-23 T 19-04-2016 ALIDE2_RS02490 e8a24d6154208cb682d79c64daaf1cca 437 SUPERFAMILY SSF53822 36 404 1.82E-49 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS02490 e8a24d6154208cb682d79c64daaf1cca 437 Pfam PF13458 Periplasmic binding protein 34 398 2.7E-79 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS02490 e8a24d6154208cb682d79c64daaf1cca 437 PANTHER PTHR30483 1 433 4.1E-19 T 19-04-2016 ALIDE2_RS01650 dbf29d64556d564d4d43eb6b7bc7c65d 669 Gene3D G3DSA:3.30.499.10 210 394 3.8E-33 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS01650 dbf29d64556d564d4d43eb6b7bc7c65d 669 Pfam PF00694 Aconitase C-terminal domain 99 147 2.2E-16 T 19-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS01650 dbf29d64556d564d4d43eb6b7bc7c65d 669 PANTHER PTHR11670 330 658 2.4E-87 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS01650 dbf29d64556d564d4d43eb6b7bc7c65d 669 Gene3D G3DSA:3.20.19.10 46 148 3.2E-20 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS01650 dbf29d64556d564d4d43eb6b7bc7c65d 669 SUPERFAMILY SSF52016 44 150 1.12E-24 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS01650 dbf29d64556d564d4d43eb6b7bc7c65d 669 SUPERFAMILY SSF53732 209 665 8.24E-103 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS01650 dbf29d64556d564d4d43eb6b7bc7c65d 669 Pfam PF00330 Aconitase family (aconitate hydratase) 336 656 4.6E-85 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS01650 dbf29d64556d564d4d43eb6b7bc7c65d 669 Gene3D G3DSA:3.40.1060.10 397 504 1.2E-27 T 19-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS01650 dbf29d64556d564d4d43eb6b7bc7c65d 669 PRINTS PR00415 Aconitase family signature 349 362 5.4E-20 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS01650 dbf29d64556d564d4d43eb6b7bc7c65d 669 PRINTS PR00415 Aconitase family signature 363 378 5.4E-20 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS01650 dbf29d64556d564d4d43eb6b7bc7c65d 669 PRINTS PR00415 Aconitase family signature 537 548 5.4E-20 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS01650 dbf29d64556d564d4d43eb6b7bc7c65d 669 PRINTS PR00415 Aconitase family signature 598 611 5.4E-20 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS01650 dbf29d64556d564d4d43eb6b7bc7c65d 669 PRINTS PR00415 Aconitase family signature 427 440 5.4E-20 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS01650 dbf29d64556d564d4d43eb6b7bc7c65d 669 PRINTS PR00415 Aconitase family signature 441 454 5.4E-20 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS01650 dbf29d64556d564d4d43eb6b7bc7c65d 669 Gene3D G3DSA:3.30.499.10 514 666 1.3E-34 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS11395 a78969ead2ed2409dbe3e361cccedc34 141 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 23 39 - T 19-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ALIDE2_RS11395 a78969ead2ed2409dbe3e361cccedc34 141 Pfam PF00472 RF-1 domain 10 134 2.1E-23 T 19-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ALIDE2_RS11395 a78969ead2ed2409dbe3e361cccedc34 141 SUPERFAMILY SSF75620 10 102 3.73E-11 T 19-04-2016 ALIDE2_RS11395 a78969ead2ed2409dbe3e361cccedc34 141 Gene3D G3DSA:3.30.160.200 10 109 1.9E-32 T 19-04-2016 ALIDE2_RS11395 a78969ead2ed2409dbe3e361cccedc34 141 PANTHER PTHR11075 12 135 1.5E-36 T 19-04-2016 ALIDE2_RS18185 d86d8086b4b01d5b925830324eb20252 229 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 2 220 6.5E-103 T 19-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 ALIDE2_RS18185 d86d8086b4b01d5b925830324eb20252 229 Pfam PF01144 Coenzyme A transferase 8 218 2.4E-61 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS18185 d86d8086b4b01d5b925830324eb20252 229 Gene3D G3DSA:3.40.1080.10 4 218 9.8E-80 T 19-04-2016 ALIDE2_RS18185 d86d8086b4b01d5b925830324eb20252 229 PANTHER PTHR13707 1 218 8.5E-87 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS18185 d86d8086b4b01d5b925830324eb20252 229 SUPERFAMILY SSF100950 2 221 3.56E-71 T 19-04-2016 ALIDE2_RS18185 d86d8086b4b01d5b925830324eb20252 229 SMART SM00882 6 219 4.0E-74 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS22360 02a0e084cc33bedfb555f6cd0f80b9f1 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.2E-19 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22360 02a0e084cc33bedfb555f6cd0f80b9f1 302 Gene3D G3DSA:3.40.190.10 92 175 8.7E-16 T 19-04-2016 ALIDE2_RS22360 02a0e084cc33bedfb555f6cd0f80b9f1 302 Gene3D G3DSA:1.10.10.10 4 86 1.5E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22360 02a0e084cc33bedfb555f6cd0f80b9f1 302 SUPERFAMILY SSF46785 2 113 1.96E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22360 02a0e084cc33bedfb555f6cd0f80b9f1 302 PANTHER PTHR30419 1 301 2.0E-78 T 19-04-2016 ALIDE2_RS22360 02a0e084cc33bedfb555f6cd0f80b9f1 302 PANTHER PTHR30419:SF2 1 301 2.0E-78 T 19-04-2016 ALIDE2_RS22360 02a0e084cc33bedfb555f6cd0f80b9f1 302 Gene3D G3DSA:3.40.190.10 176 265 3.5E-18 T 19-04-2016 ALIDE2_RS22360 02a0e084cc33bedfb555f6cd0f80b9f1 302 Pfam PF03466 LysR substrate binding domain 90 293 3.4E-35 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS22360 02a0e084cc33bedfb555f6cd0f80b9f1 302 SUPERFAMILY SSF53850 90 293 2.01E-39 T 19-04-2016 ALIDE2_RS02220 195f20494d6020e1cdf89047cca3856b 132 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 17 130 4.1E-22 T 19-04-2016 IPR003509 Uncharacterised protein family UPF0102 ALIDE2_RS02220 195f20494d6020e1cdf89047cca3856b 132 PANTHER PTHR34039 13 132 4.8E-32 T 19-04-2016 ALIDE2_RS02220 195f20494d6020e1cdf89047cca3856b 132 Hamap MF_00048 UPF0102 protein YraN [yraN]. 17 130 21.083 T 19-04-2016 IPR003509 Uncharacterised protein family UPF0102 ALIDE2_RS02220 195f20494d6020e1cdf89047cca3856b 132 SUPERFAMILY SSF52980 19 124 4.02E-16 T 19-04-2016 IPR011335 Restriction endonuclease type II-like ALIDE2_RS02220 195f20494d6020e1cdf89047cca3856b 132 Pfam PF02021 Uncharacterised protein family UPF0102 24 117 3.2E-23 T 19-04-2016 IPR003509 Uncharacterised protein family UPF0102 ALIDE2_RS02220 195f20494d6020e1cdf89047cca3856b 132 Gene3D G3DSA:3.40.1350.10 24 131 2.1E-31 T 19-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 ALIDE2_RS02220 195f20494d6020e1cdf89047cca3856b 132 PANTHER PTHR34039:SF1 13 132 4.8E-32 T 19-04-2016 ALIDE2_RS06690 6a412305550aadfd564d513af689eed6 591 PANTHER PTHR32494 137 591 1.3E-125 T 19-04-2016 ALIDE2_RS06690 6a412305550aadfd564d513af689eed6 591 SUPERFAMILY SSF53187 513 587 1.8E-72 T 19-04-2016 ALIDE2_RS06690 6a412305550aadfd564d513af689eed6 591 SUPERFAMILY SSF53187 183 401 1.8E-72 T 19-04-2016 ALIDE2_RS06690 6a412305550aadfd564d513af689eed6 591 Gene3D G3DSA:1.10.3330.10 12 174 8.5E-53 T 19-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 ALIDE2_RS06690 6a412305550aadfd564d513af689eed6 591 SUPERFAMILY SSF55031 392 502 3.84E-25 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS06690 6a412305550aadfd564d513af689eed6 591 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 204 585 2.0E-94 T 19-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 ALIDE2_RS06690 6a412305550aadfd564d513af689eed6 591 Gene3D G3DSA:3.30.70.360 405 505 4.1E-33 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS06690 6a412305550aadfd564d513af689eed6 591 Pfam PF01546 Peptidase family M20/M25/M40 255 584 7.5E-25 T 19-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 ALIDE2_RS06690 6a412305550aadfd564d513af689eed6 591 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 18 171 1.3E-51 T 19-04-2016 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 ALIDE2_RS06690 6a412305550aadfd564d513af689eed6 591 SUPERFAMILY SSF158694 4 172 2.49E-49 T 19-04-2016 ALIDE2_RS06690 6a412305550aadfd564d513af689eed6 591 Pfam PF09349 OHCU decarboxylase 9 170 1.4E-43 T 19-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 ALIDE2_RS06690 6a412305550aadfd564d513af689eed6 591 Gene3D G3DSA:3.40.630.10 180 404 2.2E-98 T 19-04-2016 ALIDE2_RS06690 6a412305550aadfd564d513af689eed6 591 Gene3D G3DSA:3.40.630.10 528 588 2.2E-98 T 19-04-2016 ALIDE2_RS20785 c1d7989e17dd07505ddaad277530dc5b 373 PANTHER PTHR24421:SF1 47 61 1.5E-41 T 19-04-2016 ALIDE2_RS20785 c1d7989e17dd07505ddaad277530dc5b 373 PANTHER PTHR24421:SF1 163 362 1.5E-41 T 19-04-2016 ALIDE2_RS20785 c1d7989e17dd07505ddaad277530dc5b 373 PANTHER PTHR24421 47 61 1.5E-41 T 19-04-2016 ALIDE2_RS20785 c1d7989e17dd07505ddaad277530dc5b 373 PANTHER PTHR24421 163 362 1.5E-41 T 19-04-2016 ALIDE2_RS20785 c1d7989e17dd07505ddaad277530dc5b 373 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 363 2.9E-9 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20785 c1d7989e17dd07505ddaad277530dc5b 373 SUPERFAMILY SSF52172 14 153 8.54E-21 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS20785 c1d7989e17dd07505ddaad277530dc5b 373 Pfam PF07730 Histidine kinase 168 233 1.8E-10 T 19-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ALIDE2_RS20785 c1d7989e17dd07505ddaad277530dc5b 373 Gene3D G3DSA:3.40.50.2300 14 154 1.5E-18 T 19-04-2016 ALIDE2_RS20785 c1d7989e17dd07505ddaad277530dc5b 373 SUPERFAMILY SSF55874 236 362 2.49E-18 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20785 c1d7989e17dd07505ddaad277530dc5b 373 Gene3D G3DSA:3.30.565.10 279 363 3.7E-11 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20785 c1d7989e17dd07505ddaad277530dc5b 373 SMART SM00448 15 131 1.6E-7 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20785 c1d7989e17dd07505ddaad277530dc5b 373 Pfam PF00072 Response regulator receiver domain 18 124 3.8E-10 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20785 c1d7989e17dd07505ddaad277530dc5b 373 SMART SM00387 270 364 1.1E-6 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS21490 934ad181bb66941f78bd55a7b000e19f 699 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 96 116 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS21490 934ad181bb66941f78bd55a7b000e19f 699 SUPERFAMILY SSF51735 298 477 3.01E-48 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21490 934ad181bb66941f78bd55a7b000e19f 699 SUPERFAMILY SSF48179 481 578 3.66E-24 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS21490 934ad181bb66941f78bd55a7b000e19f 699 PANTHER PTHR23309 4 692 2.0E-255 T 19-04-2016 ALIDE2_RS21490 934ad181bb66941f78bd55a7b000e19f 699 PANTHER PTHR23309:SF9 4 692 2.0E-255 T 19-04-2016 ALIDE2_RS21490 934ad181bb66941f78bd55a7b000e19f 699 Gene3D G3DSA:3.90.226.10 2 283 2.8E-63 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS21490 934ad181bb66941f78bd55a7b000e19f 699 Gene3D G3DSA:3.40.50.720 297 482 2.2E-52 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21490 934ad181bb66941f78bd55a7b000e19f 699 SUPERFAMILY SSF48179 606 687 2.13E-16 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS21490 934ad181bb66941f78bd55a7b000e19f 699 SUPERFAMILY SSF52096 3 287 2.57E-63 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS21490 934ad181bb66941f78bd55a7b000e19f 699 Gene3D G3DSA:1.10.1040.10 483 577 1.0E-21 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS21490 934ad181bb66941f78bd55a7b000e19f 699 Gene3D G3DSA:1.10.1040.10 611 693 1.6E-9 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS21490 934ad181bb66941f78bd55a7b000e19f 699 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 300 476 4.3E-55 T 19-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS21490 934ad181bb66941f78bd55a7b000e19f 699 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 201 4.9E-41 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS21490 934ad181bb66941f78bd55a7b000e19f 699 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 481 576 3.3E-21 T 19-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS18275 1eba7e40898f407c598879de52ab7be6 190 Gene3D G3DSA:2.40.30.60 11 111 9.9E-31 T 19-04-2016 IPR002676 RimM protein GO:0006364 ALIDE2_RS18275 1eba7e40898f407c598879de52ab7be6 190 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 16 190 24.348 T 19-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 ALIDE2_RS18275 1eba7e40898f407c598879de52ab7be6 190 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 17 189 1.8E-44 T 19-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 ALIDE2_RS18275 1eba7e40898f407c598879de52ab7be6 190 Pfam PF05239 PRC-barrel domain 115 185 3.2E-8 T 19-04-2016 IPR027275 PRC-barrel domain ALIDE2_RS18275 1eba7e40898f407c598879de52ab7be6 190 PANTHER PTHR33692 10 189 9.3E-50 T 19-04-2016 ALIDE2_RS18275 1eba7e40898f407c598879de52ab7be6 190 SUPERFAMILY SSF50447 15 110 1.41E-19 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain ALIDE2_RS18275 1eba7e40898f407c598879de52ab7be6 190 SUPERFAMILY SSF50346 117 190 3.14E-18 T 19-04-2016 IPR011033 PRC-barrel-like ALIDE2_RS18275 1eba7e40898f407c598879de52ab7be6 190 Pfam PF01782 RimM N-terminal domain 18 107 7.0E-26 T 19-04-2016 IPR002676 RimM protein GO:0006364 ALIDE2_RS18275 1eba7e40898f407c598879de52ab7be6 190 Gene3D G3DSA:2.30.30.240 117 190 1.2E-23 T 19-04-2016 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 363 369 - T 19-04-2016 IPR018303 P-type ATPase, phosphorylation site ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 Pfam PF00122 E1-E2 ATPase 130 352 1.4E-57 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 PRINTS PR00941 Cadmium-transporting ATPase signature 90 102 5.6E-6 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 PRINTS PR00941 Cadmium-transporting ATPase signature 226 242 5.6E-6 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 PRINTS PR00941 Cadmium-transporting ATPase signature 144 164 5.6E-6 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 109 662 1.1E-163 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 SUPERFAMILY SSF81653 165 260 1.7E-19 T 19-04-2016 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 109 663 1.5E-129 T 19-04-2016 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 Pfam PF00702 haloacid dehalogenase-like hydrolase 358 572 2.7E-35 T 19-04-2016 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 SUPERFAMILY SSF81665 111 163 1.14E-6 T 19-04-2016 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 SUPERFAMILY SSF81665 261 352 1.14E-6 T 19-04-2016 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 Gene3D G3DSA:2.70.150.10 112 261 2.7E-19 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 Gene3D G3DSA:3.40.1110.10 377 485 5.2E-12 T 19-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 458 644 1.9E-33 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 132 392 4.7E-34 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 Gene3D G3DSA:3.40.50.1000 336 376 5.5E-42 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 Gene3D G3DSA:3.40.50.1000 486 628 5.5E-42 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 PANTHER PTHR24093 80 666 1.4E-191 T 19-04-2016 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 483 494 1.4E-18 T 19-04-2016 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 505 515 1.4E-18 T 19-04-2016 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 361 375 1.4E-18 T 19-04-2016 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 558 577 1.4E-18 T 19-04-2016 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 210 224 1.4E-18 T 19-04-2016 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 PANTHER PTHR24093:SF317 80 666 1.4E-191 T 19-04-2016 ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 SUPERFAMILY SSF56784 359 379 1.56E-51 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS17255 5f3eae64bdb9013f25e6f366b73c3119 671 SUPERFAMILY SSF56784 416 659 1.56E-51 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS15955 e71d27550977eb3e2d431700714b0cce 393 SUPERFAMILY SSF53901 10 232 4.37E-20 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS15955 e71d27550977eb3e2d431700714b0cce 393 PANTHER PTHR18919 1 393 6.1E-109 T 19-04-2016 ALIDE2_RS15955 e71d27550977eb3e2d431700714b0cce 393 PANTHER PTHR18919:SF108 1 393 6.1E-109 T 19-04-2016 ALIDE2_RS15955 e71d27550977eb3e2d431700714b0cce 393 Gene3D G3DSA:3.40.47.10 21 113 1.9E-13 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS15955 e71d27550977eb3e2d431700714b0cce 393 Gene3D G3DSA:3.40.47.10 198 223 1.9E-13 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS15955 e71d27550977eb3e2d431700714b0cce 393 Gene3D G3DSA:3.40.47.10 246 357 3.0E-7 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS15955 e71d27550977eb3e2d431700714b0cce 393 Gene3D G3DSA:3.40.47.10 149 186 3.0E-7 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS15955 e71d27550977eb3e2d431700714b0cce 393 PIRSF PIRSF000429 4 388 4.5E-19 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS15955 e71d27550977eb3e2d431700714b0cce 393 SUPERFAMILY SSF53901 235 370 3.24E-18 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05630 7d877c119b4312818d141cde1f2eaec5 460 Gene3D G3DSA:3.80.30.20 55 249 5.6E-30 T 19-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe ALIDE2_RS05630 7d877c119b4312818d141cde1f2eaec5 460 SMART SM00729 54 274 1.0E-48 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ALIDE2_RS05630 7d877c119b4312818d141cde1f2eaec5 460 PANTHER PTHR13932 1 454 7.6E-213 T 19-04-2016 ALIDE2_RS05630 7d877c119b4312818d141cde1f2eaec5 460 PANTHER PTHR13932:SF6 1 454 7.6E-213 T 19-04-2016 ALIDE2_RS05630 7d877c119b4312818d141cde1f2eaec5 460 PIRSF PIRSF000167 2 457 8.9E-164 T 19-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 ALIDE2_RS05630 7d877c119b4312818d141cde1f2eaec5 460 SUPERFAMILY SSF102114 2 447 6.41E-133 T 19-04-2016 ALIDE2_RS05630 7d877c119b4312818d141cde1f2eaec5 460 Pfam PF04055 Radical SAM superfamily 59 230 1.7E-21 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ALIDE2_RS05630 7d877c119b4312818d141cde1f2eaec5 460 Pfam PF06969 HemN C-terminal domain 366 434 5.3E-8 T 19-04-2016 IPR010723 HemN, C-terminal ALIDE2_RS05630 7d877c119b4312818d141cde1f2eaec5 460 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 5 460 1.1E-174 T 19-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 ALIDE2_RS06625 eff3436f5f93c35e7f891b6c0176e9b0 510 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 262 269 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS06625 eff3436f5f93c35e7f891b6c0176e9b0 510 Gene3D G3DSA:3.40.605.10 23 276 8.1E-71 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS06625 eff3436f5f93c35e7f891b6c0176e9b0 510 PANTHER PTHR11699:SF144 20 509 1.6E-254 T 19-04-2016 ALIDE2_RS06625 eff3436f5f93c35e7f891b6c0176e9b0 510 Gene3D G3DSA:3.40.309.10 277 457 7.2E-49 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS06625 eff3436f5f93c35e7f891b6c0176e9b0 510 Pfam PF00171 Aldehyde dehydrogenase family 26 488 1.3E-121 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS06625 eff3436f5f93c35e7f891b6c0176e9b0 510 PANTHER PTHR11699 20 509 1.6E-254 T 19-04-2016 ALIDE2_RS06625 eff3436f5f93c35e7f891b6c0176e9b0 510 SUPERFAMILY SSF53720 23 497 3.14E-126 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22450 ee44786d893042771e36cb09d673a0e3 296 Gene3D G3DSA:3.40.190.10 92 177 1.9E-23 T 19-04-2016 ALIDE2_RS22450 ee44786d893042771e36cb09d673a0e3 296 PANTHER PTHR30537 1 295 1.6E-95 T 19-04-2016 ALIDE2_RS22450 ee44786d893042771e36cb09d673a0e3 296 Gene3D G3DSA:1.10.10.10 3 84 5.1E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22450 ee44786d893042771e36cb09d673a0e3 296 Pfam PF03466 LysR substrate binding domain 88 294 7.1E-40 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS22450 ee44786d893042771e36cb09d673a0e3 296 Gene3D G3DSA:3.40.190.10 178 259 3.1E-21 T 19-04-2016 ALIDE2_RS22450 ee44786d893042771e36cb09d673a0e3 296 SUPERFAMILY SSF53850 89 295 1.12E-40 T 19-04-2016 ALIDE2_RS22450 ee44786d893042771e36cb09d673a0e3 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.5E-20 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22450 ee44786d893042771e36cb09d673a0e3 296 SUPERFAMILY SSF46785 3 112 5.03E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22450 ee44786d893042771e36cb09d673a0e3 296 PANTHER PTHR30537:SF5 1 295 1.6E-95 T 19-04-2016 ALIDE2_RS05190 b27d610e9fd381aa5be434085ce92038 483 Pfam PF03972 MmgE/PrpD family 24 459 3.0E-115 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS05190 b27d610e9fd381aa5be434085ce92038 483 PANTHER PTHR16943 24 474 2.2E-79 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS05190 b27d610e9fd381aa5be434085ce92038 483 SUPERFAMILY SSF103378 19 470 5.89E-107 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS05190 b27d610e9fd381aa5be434085ce92038 483 PANTHER PTHR16943:SF8 24 474 2.2E-79 T 19-04-2016 ALIDE2_RS05190 b27d610e9fd381aa5be434085ce92038 483 Gene3D G3DSA:3.30.1330.120 290 429 3.3E-23 T 19-04-2016 ALIDE2_RS21610 820eefbb1895aadbe2ba44f9ee6ecefb 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 4 60 17.327 T 19-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS21610 820eefbb1895aadbe2ba44f9ee6ecefb 60 SUPERFAMILY SSF55129 5 59 9.03E-20 T 19-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain ALIDE2_RS21610 820eefbb1895aadbe2ba44f9ee6ecefb 60 PANTHER PTHR15892 6 59 5.3E-24 T 19-04-2016 ALIDE2_RS21610 820eefbb1895aadbe2ba44f9ee6ecefb 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 7 59 3.8E-24 T 19-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS21610 820eefbb1895aadbe2ba44f9ee6ecefb 60 PIRSF PIRSF002211 1 60 8.6E-26 T 19-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS21610 820eefbb1895aadbe2ba44f9ee6ecefb 60 Pfam PF00327 Ribosomal protein L30p/L7e 7 57 3.4E-18 T 19-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain ALIDE2_RS21610 820eefbb1895aadbe2ba44f9ee6ecefb 60 Gene3D G3DSA:3.30.1390.20 5 59 7.8E-30 T 19-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain ALIDE2_RS07765 7806a0367e23d4d311be06bb4a21a14e 90 SUPERFAMILY SSF81273 55 90 2.43E-8 T 19-04-2016 ALIDE2_RS07765 7806a0367e23d4d311be06bb4a21a14e 90 Gene3D G3DSA:4.10.430.10 54 81 1.1E-5 T 19-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ALIDE2_RS07765 7806a0367e23d4d311be06bb4a21a14e 90 Pfam PF00816 H-NS histone family 7 82 1.3E-20 T 19-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 ALIDE2_RS07765 7806a0367e23d4d311be06bb4a21a14e 90 SMART SM00528 51 90 0.0012 T 19-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ALIDE2_RS06570 bed0e5109068f900d04462b591ef19f0 373 PANTHER PTHR30217 35 259 4.7E-175 T 19-04-2016 ALIDE2_RS06570 bed0e5109068f900d04462b591ef19f0 373 PANTHER PTHR30217 282 372 4.7E-175 T 19-04-2016 ALIDE2_RS06570 bed0e5109068f900d04462b591ef19f0 373 ProSitePatterns PS01276 Peptidase family U32 signature. 202 220 - T 19-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS06570 bed0e5109068f900d04462b591ef19f0 373 Pfam PF01136 Peptidase family U32 118 372 6.7E-69 T 19-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS06570 bed0e5109068f900d04462b591ef19f0 373 PANTHER PTHR30217:SF3 35 259 4.7E-175 T 19-04-2016 ALIDE2_RS06570 bed0e5109068f900d04462b591ef19f0 373 PANTHER PTHR30217:SF3 282 372 4.7E-175 T 19-04-2016 ALIDE2_RS01440 e88bbce5d26b58afd90084ce4031eb4c 290 PANTHER PTHR35563:SF1 1 289 1.3E-59 T 19-04-2016 ALIDE2_RS01440 e88bbce5d26b58afd90084ce4031eb4c 290 Pfam PF04909 Amidohydrolase 23 287 4.1E-34 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 ALIDE2_RS01440 e88bbce5d26b58afd90084ce4031eb4c 290 SUPERFAMILY SSF51556 18 287 1.62E-64 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS01440 e88bbce5d26b58afd90084ce4031eb4c 290 Gene3D G3DSA:3.20.20.140 6 288 8.3E-83 T 19-04-2016 ALIDE2_RS01440 e88bbce5d26b58afd90084ce4031eb4c 290 PANTHER PTHR35563 1 289 1.3E-59 T 19-04-2016 ALIDE2_RS19505 3800014296092cef073311d8304c72bf 395 Pfam PF07687 Peptidase dimerisation domain 192 280 2.3E-4 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS19505 3800014296092cef073311d8304c72bf 395 PANTHER PTHR11014 1 395 6.2E-144 T 19-04-2016 ALIDE2_RS19505 3800014296092cef073311d8304c72bf 395 Gene3D G3DSA:3.30.70.360 188 303 8.7E-37 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS19505 3800014296092cef073311d8304c72bf 395 Pfam PF01546 Peptidase family M20/M25/M40 77 390 2.0E-33 T 19-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 ALIDE2_RS19505 3800014296092cef073311d8304c72bf 395 SUPERFAMILY SSF55031 190 302 2.62E-28 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS19505 3800014296092cef073311d8304c72bf 395 PIRSF PIRSF005962 7 394 1.7E-113 T 19-04-2016 IPR017439 Amidohydrolase GO:0016787 ALIDE2_RS19505 3800014296092cef073311d8304c72bf 395 SUPERFAMILY SSF53187 8 203 6.6E-86 T 19-04-2016 ALIDE2_RS19505 3800014296092cef073311d8304c72bf 395 SUPERFAMILY SSF53187 304 394 6.6E-86 T 19-04-2016 ALIDE2_RS19505 3800014296092cef073311d8304c72bf 395 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 381 2.6E-104 T 19-04-2016 IPR017439 Amidohydrolase GO:0016787 ALIDE2_RS19505 3800014296092cef073311d8304c72bf 395 PANTHER PTHR11014:SF63 1 395 6.2E-144 T 19-04-2016 ALIDE2_RS19505 3800014296092cef073311d8304c72bf 395 Gene3D G3DSA:3.40.630.10 9 184 8.8E-97 T 19-04-2016 ALIDE2_RS19505 3800014296092cef073311d8304c72bf 395 Gene3D G3DSA:3.40.630.10 304 393 8.8E-97 T 19-04-2016 ALIDE2_RS10440 0333a83d06822b3b9c3bd897ee4f3a45 786 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 453 775 1.0E-152 T 19-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 ALIDE2_RS10440 0333a83d06822b3b9c3bd897ee4f3a45 786 SUPERFAMILY SSF51726 418 779 6.8E-118 T 19-04-2016 ALIDE2_RS10440 0333a83d06822b3b9c3bd897ee4f3a45 786 SUPERFAMILY SSF51726 7 415 2.62E-108 T 19-04-2016 ALIDE2_RS10440 0333a83d06822b3b9c3bd897ee4f3a45 786 PANTHER PTHR30519:SF0 4 107 0.0 T 19-04-2016 ALIDE2_RS10440 0333a83d06822b3b9c3bd897ee4f3a45 786 PANTHER PTHR30519:SF0 129 785 0.0 T 19-04-2016 ALIDE2_RS10440 0333a83d06822b3b9c3bd897ee4f3a45 786 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 11 779 0.0 T 19-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 ALIDE2_RS10440 0333a83d06822b3b9c3bd897ee4f3a45 786 Gene3D G3DSA:3.20.20.210 414 780 7.7E-127 T 19-04-2016 ALIDE2_RS10440 0333a83d06822b3b9c3bd897ee4f3a45 786 Gene3D G3DSA:3.20.20.210 7 411 8.7E-144 T 19-04-2016 ALIDE2_RS10440 0333a83d06822b3b9c3bd897ee4f3a45 786 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 6 780 36.536 T 19-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 ALIDE2_RS10440 0333a83d06822b3b9c3bd897ee4f3a45 786 PIRSF PIRSF000382 5 784 0.0 T 19-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 ALIDE2_RS10440 0333a83d06822b3b9c3bd897ee4f3a45 786 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 8 336 1.1E-109 T 19-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 ALIDE2_RS10440 0333a83d06822b3b9c3bd897ee4f3a45 786 PANTHER PTHR30519 4 107 0.0 T 19-04-2016 ALIDE2_RS10440 0333a83d06822b3b9c3bd897ee4f3a45 786 PANTHER PTHR30519 129 785 0.0 T 19-04-2016 ALIDE2_RS12505 b608afea8b06c1c4c05c277badd30664 222 PANTHER PTHR21392 1 206 1.8E-38 T 19-04-2016 ALIDE2_RS12505 b608afea8b06c1c4c05c277badd30664 222 SMART SM01144 7 210 2.1E-56 T 19-04-2016 IPR005636 DTW ALIDE2_RS12505 b608afea8b06c1c4c05c277badd30664 222 Pfam PF03942 DTW domain 8 205 2.7E-40 T 19-04-2016 IPR005636 DTW ALIDE2_RS18640 be8865602decf2e408f5d385c8bf99aa 365 SMART SM00829 14 363 8.6E-5 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ALIDE2_RS18640 be8865602decf2e408f5d385c8bf99aa 365 SUPERFAMILY SSF50129 5 191 5.33E-39 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS18640 be8865602decf2e408f5d385c8bf99aa 365 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 19-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS18640 be8865602decf2e408f5d385c8bf99aa 365 Gene3D G3DSA:3.90.180.10 3 185 1.1E-40 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS18640 be8865602decf2e408f5d385c8bf99aa 365 Gene3D G3DSA:3.40.50.720 186 297 3.6E-38 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS18640 be8865602decf2e408f5d385c8bf99aa 365 Pfam PF00107 Zinc-binding dehydrogenase 194 297 1.8E-27 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ALIDE2_RS18640 be8865602decf2e408f5d385c8bf99aa 365 PANTHER PTHR11695:SF281 16 88 4.9E-114 T 19-04-2016 ALIDE2_RS18640 be8865602decf2e408f5d385c8bf99aa 365 PANTHER PTHR11695:SF281 124 365 4.9E-114 T 19-04-2016 ALIDE2_RS18640 be8865602decf2e408f5d385c8bf99aa 365 PANTHER PTHR11695 16 88 4.9E-114 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS18640 be8865602decf2e408f5d385c8bf99aa 365 PANTHER PTHR11695 124 365 4.9E-114 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS18640 be8865602decf2e408f5d385c8bf99aa 365 SUPERFAMILY SSF51735 157 328 1.58E-40 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS18640 be8865602decf2e408f5d385c8bf99aa 365 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 147 1.6E-21 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ALIDE2_RS21655 77c138005702b556cff4f34635d39632 532 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 383 393 - T 19-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 ALIDE2_RS21655 77c138005702b556cff4f34635d39632 532 Pfam PF01266 FAD dependent oxidoreductase 28 389 8.1E-53 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS21655 77c138005702b556cff4f34635d39632 532 SUPERFAMILY SSF51905 26 355 3.18E-41 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS21655 77c138005702b556cff4f34635d39632 532 PANTHER PTHR11985 14 516 7.3E-200 T 19-04-2016 ALIDE2_RS21655 77c138005702b556cff4f34635d39632 532 Gene3D G3DSA:3.50.50.60 23 326 3.4E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS21655 77c138005702b556cff4f34635d39632 532 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 437 515 7.6E-17 T 19-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 ALIDE2_RS21655 77c138005702b556cff4f34635d39632 532 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 101 113 2.5E-30 T 19-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 ALIDE2_RS21655 77c138005702b556cff4f34635d39632 532 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 40 50 2.5E-30 T 19-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 ALIDE2_RS21655 77c138005702b556cff4f34635d39632 532 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 56 68 2.5E-30 T 19-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 ALIDE2_RS21655 77c138005702b556cff4f34635d39632 532 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 378 390 2.5E-30 T 19-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 ALIDE2_RS21655 77c138005702b556cff4f34635d39632 532 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 345 351 2.5E-30 T 19-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 ALIDE2_RS21655 77c138005702b556cff4f34635d39632 532 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 27 39 2.5E-30 T 19-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 ALIDE2_RS01510 b7ddd3f866cfeb462cccae64ed702cad 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 22 38 1.1E-5 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS01510 b7ddd3f866cfeb462cccae64ed702cad 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 255 273 1.1E-5 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS01510 b7ddd3f866cfeb462cccae64ed702cad 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 44 60 1.1E-5 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS01510 b7ddd3f866cfeb462cccae64ed702cad 384 Pfam PF13458 Periplasmic binding protein 22 371 2.2E-65 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS01510 b7ddd3f866cfeb462cccae64ed702cad 384 PANTHER PTHR30483 4 374 3.5E-63 T 19-04-2016 ALIDE2_RS01510 b7ddd3f866cfeb462cccae64ed702cad 384 Gene3D G3DSA:3.40.50.2300 152 299 9.4E-29 T 19-04-2016 ALIDE2_RS01510 b7ddd3f866cfeb462cccae64ed702cad 384 Gene3D G3DSA:3.40.50.2300 300 349 8.9E-43 T 19-04-2016 ALIDE2_RS01510 b7ddd3f866cfeb462cccae64ed702cad 384 Gene3D G3DSA:3.40.50.2300 17 146 8.9E-43 T 19-04-2016 ALIDE2_RS01510 b7ddd3f866cfeb462cccae64ed702cad 384 SUPERFAMILY SSF53822 20 374 2.19E-77 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS01510 b7ddd3f866cfeb462cccae64ed702cad 384 PANTHER PTHR30483:SF6 4 374 3.5E-63 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS21560 39703139fa2cc658bc462aaef799ce28 396 Pfam PF04986 Putative transposase 144 332 8.4E-61 T 19-04-2016 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS21560 39703139fa2cc658bc462aaef799ce28 396 Pfam PF14319 Transposase zinc-binding domain 10 118 1.3E-39 T 19-04-2016 IPR026889 Transposase zinc-binding domain ALIDE2_RS21560 39703139fa2cc658bc462aaef799ce28 396 PANTHER PTHR37023 6 206 7.8E-45 T 19-04-2016 ALIDE2_RS21560 39703139fa2cc658bc462aaef799ce28 396 PANTHER PTHR37023 225 382 7.8E-45 T 19-04-2016 ALIDE2_RS06595 e3669f55e08ecab7ca5b300fb3aa8928 180 PRINTS PR00773 GrpE protein signature 157 176 6.6E-26 T 19-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 ALIDE2_RS06595 e3669f55e08ecab7ca5b300fb3aa8928 180 PRINTS PR00773 GrpE protein signature 131 146 6.6E-26 T 19-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 ALIDE2_RS06595 e3669f55e08ecab7ca5b300fb3aa8928 180 PRINTS PR00773 GrpE protein signature 78 93 6.6E-26 T 19-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 ALIDE2_RS06595 e3669f55e08ecab7ca5b300fb3aa8928 180 PRINTS PR00773 GrpE protein signature 50 66 6.6E-26 T 19-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 ALIDE2_RS06595 e3669f55e08ecab7ca5b300fb3aa8928 180 ProSitePatterns PS01071 grpE protein signature. 134 176 - T 19-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 ALIDE2_RS06595 e3669f55e08ecab7ca5b300fb3aa8928 180 Pfam PF01025 GrpE 22 177 5.8E-50 T 19-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 ALIDE2_RS06595 e3669f55e08ecab7ca5b300fb3aa8928 180 SUPERFAMILY SSF58014 27 120 5.23E-24 T 19-04-2016 ALIDE2_RS06595 e3669f55e08ecab7ca5b300fb3aa8928 180 SUPERFAMILY SSF51064 126 178 3.4E-16 T 19-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 ALIDE2_RS06595 e3669f55e08ecab7ca5b300fb3aa8928 180 Gene3D G3DSA:2.30.22.10 126 178 7.4E-23 T 19-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 ALIDE2_RS06595 e3669f55e08ecab7ca5b300fb3aa8928 180 Gene3D G3DSA:3.90.20.20 25 120 3.6E-27 T 19-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil ALIDE2_RS06595 e3669f55e08ecab7ca5b300fb3aa8928 180 Hamap MF_01151 Protein GrpE [grpE]. 2 178 19.223 T 19-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 ALIDE2_RS06595 e3669f55e08ecab7ca5b300fb3aa8928 180 PANTHER PTHR21237 14 180 1.2E-49 T 19-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 ALIDE2_RS03615 34dffbc1cf04a6d66be4b51d79d3109e 297 SUPERFAMILY SSF46785 5 114 3.05E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS03615 34dffbc1cf04a6d66be4b51d79d3109e 297 Pfam PF03466 LysR substrate binding domain 91 294 8.1E-37 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS03615 34dffbc1cf04a6d66be4b51d79d3109e 297 PANTHER PTHR30427 3 296 4.7E-64 T 19-04-2016 ALIDE2_RS03615 34dffbc1cf04a6d66be4b51d79d3109e 297 Gene3D G3DSA:3.40.190.10 94 180 5.2E-21 T 19-04-2016 ALIDE2_RS03615 34dffbc1cf04a6d66be4b51d79d3109e 297 Gene3D G3DSA:3.40.190.10 181 262 8.7E-15 T 19-04-2016 ALIDE2_RS03615 34dffbc1cf04a6d66be4b51d79d3109e 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.2E-14 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS03615 34dffbc1cf04a6d66be4b51d79d3109e 297 Gene3D G3DSA:1.10.10.10 8 88 1.8E-16 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS03615 34dffbc1cf04a6d66be4b51d79d3109e 297 SUPERFAMILY SSF53850 94 296 2.64E-36 T 19-04-2016 ALIDE2_RS21430 c40761248a18cf0174566ac251e0d6e9 292 SUPERFAMILY SSF56176 1 174 4.63E-58 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS21430 c40761248a18cf0174566ac251e0d6e9 292 Gene3D G3DSA:3.30.43.10 1 54 3.5E-21 T 19-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 ALIDE2_RS21430 c40761248a18cf0174566ac251e0d6e9 292 Gene3D G3DSA:3.30.390.50 180 286 7.5E-25 T 19-04-2016 ALIDE2_RS21430 c40761248a18cf0174566ac251e0d6e9 292 Gene3D G3DSA:3.30.465.10 60 173 1.8E-37 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ALIDE2_RS21430 c40761248a18cf0174566ac251e0d6e9 292 PANTHER PTHR11908 1 285 2.6E-71 T 19-04-2016 ALIDE2_RS21430 c40761248a18cf0174566ac251e0d6e9 292 SMART SM01092 181 282 5.9E-19 T 19-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal ALIDE2_RS21430 c40761248a18cf0174566ac251e0d6e9 292 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 174 1.9E-51 T 19-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 ALIDE2_RS21430 c40761248a18cf0174566ac251e0d6e9 292 SUPERFAMILY SSF55447 181 285 5.76E-20 T 19-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal ALIDE2_RS21430 c40761248a18cf0174566ac251e0d6e9 292 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 183 281 9.2E-16 T 19-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal ALIDE2_RS21430 c40761248a18cf0174566ac251e0d6e9 292 PANTHER PTHR11908:SF68 1 285 2.6E-71 T 19-04-2016 ALIDE2_RS13160 42888062691e54fd00d52795fb40381f 283 TIGRFAM TIGR01334 modD: modD protein 5 279 8.3E-65 T 19-04-2016 IPR006242 Putative pyrophosphorylase ModD GO:0016763 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.- ALIDE2_RS13160 42888062691e54fd00d52795fb40381f 283 SUPERFAMILY SSF51690 108 278 1.88E-38 T 19-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 ALIDE2_RS13160 42888062691e54fd00d52795fb40381f 283 PANTHER PTHR11948:SF1 11 281 3.2E-50 T 19-04-2016 ALIDE2_RS13160 42888062691e54fd00d52795fb40381f 283 SUPERFAMILY SSF54675 8 107 5.49E-22 T 19-04-2016 ALIDE2_RS13160 42888062691e54fd00d52795fb40381f 283 PANTHER PTHR11948 11 281 3.2E-50 T 19-04-2016 ALIDE2_RS13160 42888062691e54fd00d52795fb40381f 283 PIRSF PIRSF006250 3 282 5.2E-56 T 19-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD ALIDE2_RS13160 42888062691e54fd00d52795fb40381f 283 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 108 276 1.3E-31 T 19-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 ALIDE2_RS13160 42888062691e54fd00d52795fb40381f 283 Gene3D G3DSA:3.90.1170.20 9 130 3.0E-27 T 19-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 ALIDE2_RS13160 42888062691e54fd00d52795fb40381f 283 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 22 106 1.1E-18 T 19-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 ALIDE2_RS13160 42888062691e54fd00d52795fb40381f 283 Gene3D G3DSA:3.20.20.70 131 270 1.2E-36 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS15560 84868d10712e2b1f388041d1bc569bd8 197 PANTHER PTHR31223:SF0 7 180 3.9E-72 T 19-04-2016 ALIDE2_RS15560 84868d10712e2b1f388041d1bc569bd8 197 Gene3D G3DSA:3.40.50.450 5 180 1.7E-63 T 19-04-2016 ALIDE2_RS15560 84868d10712e2b1f388041d1bc569bd8 197 Pfam PF03641 Possible lysine decarboxylase 50 178 1.8E-38 T 19-04-2016 IPR031100 LOG family ALIDE2_RS15560 84868d10712e2b1f388041d1bc569bd8 197 SUPERFAMILY SSF102405 6 180 2.75E-58 T 19-04-2016 ALIDE2_RS15560 84868d10712e2b1f388041d1bc569bd8 197 PANTHER PTHR31223 7 180 3.9E-72 T 19-04-2016 ALIDE2_RS15560 84868d10712e2b1f388041d1bc569bd8 197 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 7 178 1.4E-56 T 19-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG ALIDE2_RS11595 2e6f1578a7ab5563c71687a40c9566f1 234 Gene3D G3DSA:3.30.70.980 128 196 4.5E-16 T 19-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 ALIDE2_RS11595 2e6f1578a7ab5563c71687a40c9566f1 234 Pfam PF01709 Transcriptional regulator 9 229 2.5E-63 T 19-04-2016 IPR002876 Transcriptional regulator TACO1-like ALIDE2_RS11595 2e6f1578a7ab5563c71687a40c9566f1 234 PANTHER PTHR12532 10 229 1.4E-65 T 19-04-2016 IPR002876 Transcriptional regulator TACO1-like ALIDE2_RS11595 2e6f1578a7ab5563c71687a40c9566f1 234 SUPERFAMILY SSF75625 4 231 1.7E-61 T 19-04-2016 IPR029072 YebC-like ALIDE2_RS11595 2e6f1578a7ab5563c71687a40c9566f1 234 Gene3D G3DSA:1.10.10.200 19 73 3.5E-22 T 19-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like ALIDE2_RS11595 2e6f1578a7ab5563c71687a40c9566f1 234 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 234 22.879 T 19-04-2016 IPR002876 Transcriptional regulator TACO1-like ALIDE2_RS11595 2e6f1578a7ab5563c71687a40c9566f1 234 Gene3D G3DSA:3.30.1270.10 78 127 5.3E-22 T 19-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 ALIDE2_RS11595 2e6f1578a7ab5563c71687a40c9566f1 234 Gene3D G3DSA:3.30.1270.10 207 229 5.3E-22 T 19-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 ALIDE2_RS15445 c629124eb06a5dd47d3e5fb9385f33b6 239 PANTHER PTHR24567 8 236 2.7E-40 T 19-04-2016 ALIDE2_RS15445 c629124eb06a5dd47d3e5fb9385f33b6 239 Gene3D G3DSA:2.60.120.10 18 150 6.2E-31 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS15445 c629124eb06a5dd47d3e5fb9385f33b6 239 Gene3D G3DSA:1.10.10.10 155 236 8.0E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15445 c629124eb06a5dd47d3e5fb9385f33b6 239 SUPERFAMILY SSF46785 156 235 1.99E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15445 c629124eb06a5dd47d3e5fb9385f33b6 239 Pfam PF13545 Crp-like helix-turn-helix domain 158 234 1.4E-14 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS15445 c629124eb06a5dd47d3e5fb9385f33b6 239 SMART SM00419 179 227 1.7E-5 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS15445 c629124eb06a5dd47d3e5fb9385f33b6 239 SUPERFAMILY SSF51206 13 150 1.06E-31 T 19-04-2016 IPR018490 Cyclic nucleotide-binding-like ALIDE2_RS15445 c629124eb06a5dd47d3e5fb9385f33b6 239 PANTHER PTHR24567:SF30 8 236 2.7E-40 T 19-04-2016 ALIDE2_RS15445 c629124eb06a5dd47d3e5fb9385f33b6 239 Pfam PF00027 Cyclic nucleotide-binding domain 38 125 2.0E-17 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS15445 c629124eb06a5dd47d3e5fb9385f33b6 239 SMART SM00100 19 137 8.1E-13 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS20020 284c1565dbd8ef7f21d2b1e7ea78008e 169 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 22 144 1.3E-33 T 19-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 ALIDE2_RS20020 284c1565dbd8ef7f21d2b1e7ea78008e 169 PANTHER PTHR33540 12 153 1.8E-28 T 19-04-2016 ALIDE2_RS20020 284c1565dbd8ef7f21d2b1e7ea78008e 169 PANTHER PTHR33540:SF2 12 153 1.8E-28 T 19-04-2016 ALIDE2_RS20020 284c1565dbd8ef7f21d2b1e7ea78008e 169 Gene3D G3DSA:3.40.50.300 18 164 3.4E-41 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20020 284c1565dbd8ef7f21d2b1e7ea78008e 169 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 22 154 5.7E-33 T 19-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 ALIDE2_RS20020 284c1565dbd8ef7f21d2b1e7ea78008e 169 SUPERFAMILY SSF52540 42 149 5.29E-19 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07865 bfba30b8c331b331b0e7dae88a77fdb0 817 Gene3D G3DSA:3.40.50.300 603 718 1.2E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07865 bfba30b8c331b331b0e7dae88a77fdb0 817 Gene3D G3DSA:3.40.50.300 424 515 1.2E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07865 bfba30b8c331b331b0e7dae88a77fdb0 817 SMART SM00382 440 704 3.0E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS07865 bfba30b8c331b331b0e7dae88a77fdb0 817 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 182 388 2.3E-15 T 19-04-2016 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 ALIDE2_RS07865 bfba30b8c331b331b0e7dae88a77fdb0 817 SUPERFAMILY SSF52540 397 738 2.48E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01670 cc3c2661caec5b9a3a2e8f445d7e0b47 229 PANTHER PTHR17630:SF42 9 228 4.0E-40 T 19-04-2016 ALIDE2_RS01670 cc3c2661caec5b9a3a2e8f445d7e0b47 229 PANTHER PTHR17630 9 228 4.0E-40 T 19-04-2016 ALIDE2_RS01670 cc3c2661caec5b9a3a2e8f445d7e0b47 229 SUPERFAMILY SSF53474 2 227 2.03E-46 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS01670 cc3c2661caec5b9a3a2e8f445d7e0b47 229 Gene3D G3DSA:3.40.50.1820 3 228 4.4E-52 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS01670 cc3c2661caec5b9a3a2e8f445d7e0b47 229 Pfam PF01738 Dienelactone hydrolase family 15 227 6.4E-48 T 19-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 ALIDE2_RS12670 0577795f47e1fe3fe62b5e0c758c9ba8 124 PANTHER PTHR11715 3 120 5.7E-63 T 19-04-2016 IPR002930 Glycine cleavage system H-protein ALIDE2_RS12670 0577795f47e1fe3fe62b5e0c758c9ba8 124 Gene3D G3DSA:2.40.50.100 2 122 3.2E-49 T 19-04-2016 ALIDE2_RS12670 0577795f47e1fe3fe62b5e0c758c9ba8 124 Pfam PF01597 Glycine cleavage H-protein 3 120 1.5E-40 T 19-04-2016 IPR002930 Glycine cleavage system H-protein ALIDE2_RS12670 0577795f47e1fe3fe62b5e0c758c9ba8 124 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 44 73 - T 19-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ALIDE2_RS12670 0577795f47e1fe3fe62b5e0c758c9ba8 124 SUPERFAMILY SSF51230 3 120 7.2E-40 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS12670 0577795f47e1fe3fe62b5e0c758c9ba8 124 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 122 25.932 T 19-04-2016 IPR002930 Glycine cleavage system H-protein ALIDE2_RS12670 0577795f47e1fe3fe62b5e0c758c9ba8 124 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 119 3.2E-43 T 19-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 ALIDE2_RS00395 64a8f672caf21f4006c8ecf13a899dda 428 PANTHER PTHR11119:SF49 19 426 6.0E-176 T 19-04-2016 ALIDE2_RS00395 64a8f672caf21f4006c8ecf13a899dda 428 Pfam PF00860 Permease family 30 399 1.9E-90 T 19-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS00395 64a8f672caf21f4006c8ecf13a899dda 428 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 26 422 1.1E-106 T 19-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 ALIDE2_RS00395 64a8f672caf21f4006c8ecf13a899dda 428 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 347 367 - T 19-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 ALIDE2_RS00395 64a8f672caf21f4006c8ecf13a899dda 428 PANTHER PTHR11119 19 426 6.0E-176 T 19-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS05365 2fe86d75c6c9038b68d3b3a5228e4098 225 Pfam PF00571 CBS domain 162 216 2.1E-11 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS05365 2fe86d75c6c9038b68d3b3a5228e4098 225 Pfam PF00571 CBS domain 88 142 4.1E-8 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS05365 2fe86d75c6c9038b68d3b3a5228e4098 225 SUPERFAMILY SSF54631 85 216 1.42E-29 T 19-04-2016 ALIDE2_RS05365 2fe86d75c6c9038b68d3b3a5228e4098 225 PANTHER PTHR11911 76 217 1.2E-25 T 19-04-2016 ALIDE2_RS05365 2fe86d75c6c9038b68d3b3a5228e4098 225 Gene3D G3DSA:3.10.580.10 86 217 1.8E-28 T 19-04-2016 ALIDE2_RS05365 2fe86d75c6c9038b68d3b3a5228e4098 225 SMART SM00116 168 216 3.4E-11 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS05365 2fe86d75c6c9038b68d3b3a5228e4098 225 SMART SM00116 95 143 0.031 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS04470 4c1647c0b84c07548262b12c2cae1c41 444 Pfam PF01595 Domain of unknown function DUF21 9 199 2.2E-42 T 19-04-2016 IPR002550 Domain of unknown function DUF21 ALIDE2_RS04470 4c1647c0b84c07548262b12c2cae1c41 444 Gene3D G3DSA:3.30.465.10 343 427 1.4E-27 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ALIDE2_RS04470 4c1647c0b84c07548262b12c2cae1c41 444 SUPERFAMILY SSF54631 202 337 1.93E-21 T 19-04-2016 ALIDE2_RS04470 4c1647c0b84c07548262b12c2cae1c41 444 Pfam PF00571 CBS domain 286 334 1.6E-4 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS04470 4c1647c0b84c07548262b12c2cae1c41 444 SMART SM01091 348 428 1.9E-29 T 19-04-2016 IPR005170 Transporter-associated domain ALIDE2_RS04470 4c1647c0b84c07548262b12c2cae1c41 444 SUPERFAMILY SSF56176 346 433 7.63E-24 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS04470 4c1647c0b84c07548262b12c2cae1c41 444 PANTHER PTHR22777 1 427 2.1E-214 T 19-04-2016 ALIDE2_RS04470 4c1647c0b84c07548262b12c2cae1c41 444 Gene3D G3DSA:3.10.580.10 200 338 2.5E-11 T 19-04-2016 ALIDE2_RS04470 4c1647c0b84c07548262b12c2cae1c41 444 Pfam PF03471 Transporter associated domain 349 426 1.0E-21 T 19-04-2016 IPR005170 Transporter-associated domain ALIDE2_RS04470 4c1647c0b84c07548262b12c2cae1c41 444 PANTHER PTHR22777:SF16 1 427 2.1E-214 T 19-04-2016 ALIDE2_RS21195 c6c0c258383268d4e97ac563d44074ae 375 SUPERFAMILY SSF56436 57 370 4.9E-79 T 19-04-2016 IPR016187 C-type lectin fold ALIDE2_RS21195 c6c0c258383268d4e97ac563d44074ae 375 Gene3D G3DSA:3.90.1580.10 55 370 4.6E-87 T 19-04-2016 IPR005532 Sulfatase-modifying factor enzyme ALIDE2_RS21195 c6c0c258383268d4e97ac563d44074ae 375 Pfam PF03781 Sulfatase-modifying factor enzyme 1 59 367 2.0E-79 T 19-04-2016 IPR005532 Sulfatase-modifying factor enzyme ALIDE2_RS21195 c6c0c258383268d4e97ac563d44074ae 375 PANTHER PTHR23150 60 147 7.6E-86 T 19-04-2016 ALIDE2_RS21195 c6c0c258383268d4e97ac563d44074ae 375 PANTHER PTHR23150 164 373 7.6E-86 T 19-04-2016 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 Gene3D G3DSA:3.30.413.10 438 581 4.6E-32 T 19-04-2016 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 Gene3D G3DSA:3.90.480.10 110 149 1.6E-26 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 Gene3D G3DSA:3.90.480.10 351 433 1.6E-26 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 Gene3D G3DSA:3.90.480.10 48 78 1.6E-26 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 SUPERFAMILY SSF55124 345 451 1.39E-17 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 Gene3D G3DSA:3.30.413.10 153 303 8.1E-38 T 19-04-2016 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 SUPERFAMILY SSF55124 19 78 2.32E-12 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 SUPERFAMILY SSF55124 111 145 2.32E-12 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 PANTHER PTHR11493:SF47 1 79 3.5E-116 T 19-04-2016 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 PANTHER PTHR11493:SF47 112 328 3.5E-116 T 19-04-2016 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 PANTHER PTHR11493:SF47 357 588 3.5E-116 T 19-04-2016 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 485 581 2.0E-9 T 19-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 151 301 2.1E-34 T 19-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 PANTHER PTHR11493 1 79 3.5E-116 T 19-04-2016 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 PANTHER PTHR11493 112 328 3.5E-116 T 19-04-2016 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 PANTHER PTHR11493 357 588 3.5E-116 T 19-04-2016 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 378 428 1.2E-12 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 SUPERFAMILY SSF56014 437 589 9.95E-36 T 19-04-2016 ALIDE2_RS15360 2e1b856e576eb053fb0babc149c2700c 595 SUPERFAMILY SSF56014 152 310 5.23E-41 T 19-04-2016 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 ProSitePatterns PS01244 Aconitase family signature 2. 473 486 - T 19-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 Gene3D G3DSA:3.30.499.10 27 245 3.8E-62 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 Gene3D G3DSA:3.20.19.10 617 866 2.3E-54 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 PANTHER PTHR11670:SF1 727 871 0.0 T 19-04-2016 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 PANTHER PTHR11670:SF1 23 688 0.0 T 19-04-2016 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 Gene3D G3DSA:3.30.499.10 365 554 7.9E-48 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 PANTHER PTHR11670 727 871 0.0 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 PANTHER PTHR11670 23 688 0.0 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 Pfam PF00330 Aconitase family (aconitate hydratase) 72 542 1.7E-151 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 PRINTS PR00415 Aconitase family signature 213 228 7.3E-33 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 PRINTS PR00415 Aconitase family signature 166 174 7.3E-33 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 PRINTS PR00415 Aconitase family signature 368 382 7.3E-33 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 PRINTS PR00415 Aconitase family signature 199 212 7.3E-33 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 PRINTS PR00415 Aconitase family signature 275 288 7.3E-33 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 PRINTS PR00415 Aconitase family signature 142 155 7.3E-33 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 PRINTS PR00415 Aconitase family signature 411 422 7.3E-33 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 PRINTS PR00415 Aconitase family signature 289 302 7.3E-33 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 PRINTS PR00415 Aconitase family signature 473 486 7.3E-33 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 SUPERFAMILY SSF52016 610 866 8.04E-62 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 ProSitePatterns PS00450 Aconitase family signature 1. 407 423 - T 19-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 SUPERFAMILY SSF53732 13 592 2.22E-179 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 Gene3D G3DSA:3.40.1060.10 246 363 1.1E-32 T 19-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 Pfam PF00694 Aconitase C-terminal domain 668 795 2.9E-33 T 19-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS04875 3538edf61e1c22aae9d4cfc9db79cddd 884 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 29 866 1.4E-285 T 19-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 ALIDE2_RS15465 c67677cceefb676209ac17ad07a2b577 500 PANTHER PTHR11819 6 480 2.4E-184 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS15465 c67677cceefb676209ac17ad07a2b577 500 PANTHER PTHR11819:SF148 6 480 2.4E-184 T 19-04-2016 ALIDE2_RS15465 c67677cceefb676209ac17ad07a2b577 500 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 9 492 9.2E-211 T 19-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 ALIDE2_RS15465 c67677cceefb676209ac17ad07a2b577 500 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 37 440 1.6E-110 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS15465 c67677cceefb676209ac17ad07a2b577 500 Pfam PF00474 Sodium:solute symporter family 37 440 1.2E-122 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS15465 c67677cceefb676209ac17ad07a2b577 500 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 422 442 - T 19-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS11565 05b961d9a9b41be109b647f479f176a5 478 PANTHER PTHR11046 224 474 4.8E-186 T 19-04-2016 ALIDE2_RS11565 05b961d9a9b41be109b647f479f176a5 478 PANTHER PTHR11046 3 208 4.8E-186 T 19-04-2016 ALIDE2_RS11565 05b961d9a9b41be109b647f479f176a5 478 SMART SM00479 3 195 0.0036 T 19-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ALIDE2_RS11565 05b961d9a9b41be109b647f479f176a5 478 Pfam PF00929 Exonuclease 5 185 3.8E-26 T 19-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ALIDE2_RS11565 05b961d9a9b41be109b647f479f176a5 478 PANTHER PTHR11046:SF2 224 474 4.8E-186 T 19-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 ALIDE2_RS11565 05b961d9a9b41be109b647f479f176a5 478 PANTHER PTHR11046:SF2 3 208 4.8E-186 T 19-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 ALIDE2_RS11565 05b961d9a9b41be109b647f479f176a5 478 Gene3D G3DSA:3.30.420.10 2 192 2.0E-78 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS11565 05b961d9a9b41be109b647f479f176a5 478 PIRSF PIRSF000977 1 477 2.1E-204 T 19-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 ALIDE2_RS11565 05b961d9a9b41be109b647f479f176a5 478 SUPERFAMILY SSF53098 1 473 1.01E-117 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS11565 05b961d9a9b41be109b647f479f176a5 478 Pfam PF08411 Exonuclease C-terminal 204 472 1.4E-95 T 19-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 ALIDE2_RS01135 ffcbd8b5a7b1a9374f63a3f62909a540 691 Pfam PF13549 ATP-grasp domain 472 685 1.6E-48 T 19-04-2016 ALIDE2_RS01135 ffcbd8b5a7b1a9374f63a3f62909a540 691 PANTHER PTHR33303 11 686 3.6E-133 T 19-04-2016 ALIDE2_RS01135 ffcbd8b5a7b1a9374f63a3f62909a540 691 Pfam PF13380 CoA binding domain 18 143 7.9E-22 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS01135 ffcbd8b5a7b1a9374f63a3f62909a540 691 PANTHER PTHR33303:SF3 11 686 3.6E-133 T 19-04-2016 ALIDE2_RS01135 ffcbd8b5a7b1a9374f63a3f62909a540 691 SUPERFAMILY SSF56059 474 685 1.3E-27 T 19-04-2016 ALIDE2_RS01135 ffcbd8b5a7b1a9374f63a3f62909a540 691 Gene3D G3DSA:3.40.50.720 5 138 1.1E-37 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS01135 ffcbd8b5a7b1a9374f63a3f62909a540 691 Gene3D G3DSA:3.30.470.20 559 683 3.6E-4 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS01135 ffcbd8b5a7b1a9374f63a3f62909a540 691 SUPERFAMILY SSF51735 6 147 3.45E-35 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS01135 ffcbd8b5a7b1a9374f63a3f62909a540 691 SUPERFAMILY SSF52210 139 299 6.15E-29 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS01135 ffcbd8b5a7b1a9374f63a3f62909a540 691 SMART SM00881 13 108 7.1E-29 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS01135 ffcbd8b5a7b1a9374f63a3f62909a540 691 Gene3D G3DSA:3.40.50.261 139 297 7.9E-22 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS01135 ffcbd8b5a7b1a9374f63a3f62909a540 691 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 163 297 1.2E-33 T 19-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain ALIDE2_RS01135 ffcbd8b5a7b1a9374f63a3f62909a540 691 SUPERFAMILY SSF52210 310 459 8.11E-20 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS14305 00658c44c762adbe2e735488bfb3012e 112 Pfam PF04320 Protein with unknown function (DUF469) 11 109 5.4E-30 T 19-04-2016 IPR007416 Protein of unknown function DUF469 ALIDE2_RS14305 00658c44c762adbe2e735488bfb3012e 112 PANTHER PTHR38778 6 109 1.4E-25 T 19-04-2016 ALIDE2_RS14305 00658c44c762adbe2e735488bfb3012e 112 PANTHER PTHR38778:SF1 6 109 1.4E-25 T 19-04-2016 ALIDE2_RS17180 ce17fb0029877bcc673b2b399b7900b7 391 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 386 44.536 T 19-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17180 ce17fb0029877bcc673b2b399b7900b7 391 SUPERFAMILY SSF51735 3 151 2.51E-44 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS17180 ce17fb0029877bcc673b2b399b7900b7 391 SUPERFAMILY SSF55347 127 268 7.52E-57 T 19-04-2016 ALIDE2_RS17180 ce17fb0029877bcc673b2b399b7900b7 391 PANTHER PTHR30525 1 391 1.7E-198 T 19-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17180 ce17fb0029877bcc673b2b399b7900b7 391 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 387 5.4E-145 T 19-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17180 ce17fb0029877bcc673b2b399b7900b7 391 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 133 5.0E-46 T 19-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17180 ce17fb0029877bcc673b2b399b7900b7 391 Pfam PF13288 DXP reductoisomerase C-terminal domain 265 381 2.1E-37 T 19-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17180 ce17fb0029877bcc673b2b399b7900b7 391 Gene3D G3DSA:3.40.50.720 2 151 9.4E-55 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS17180 ce17fb0029877bcc673b2b399b7900b7 391 SUPERFAMILY SSF69055 296 389 4.97E-26 T 19-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17180 ce17fb0029877bcc673b2b399b7900b7 391 Gene3D G3DSA:1.10.1740.10 307 389 1.1E-25 T 19-04-2016 ALIDE2_RS17180 ce17fb0029877bcc673b2b399b7900b7 391 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 147 233 1.5E-35 T 19-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17180 ce17fb0029877bcc673b2b399b7900b7 391 PIRSF PIRSF006205 2 391 1.2E-145 T 19-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17375 a53f874127cdfc3b03426e656995777d 382 Gene3D G3DSA:3.40.50.1100 52 147 2.4E-23 T 19-04-2016 ALIDE2_RS17375 a53f874127cdfc3b03426e656995777d 382 PANTHER PTHR10314 1 351 8.3E-186 T 19-04-2016 ALIDE2_RS17375 a53f874127cdfc3b03426e656995777d 382 PANTHER PTHR10314:SF126 1 351 8.3E-186 T 19-04-2016 ALIDE2_RS17375 a53f874127cdfc3b03426e656995777d 382 SUPERFAMILY SSF53686 24 340 1.31E-69 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS17375 a53f874127cdfc3b03426e656995777d 382 Gene3D G3DSA:3.40.50.1100 148 338 4.8E-36 T 19-04-2016 ALIDE2_RS17375 a53f874127cdfc3b03426e656995777d 382 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 38 320 2.4E-45 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS23495 b5d25659369e7474a3c5ec937d5ca2f8 514 SUPERFAMILY SSF53850 31 511 2.86E-141 T 19-04-2016 ALIDE2_RS23495 b5d25659369e7474a3c5ec937d5ca2f8 514 PANTHER PTHR30290:SF32 24 503 1.1E-202 T 19-04-2016 ALIDE2_RS23495 b5d25659369e7474a3c5ec937d5ca2f8 514 PANTHER PTHR30290 24 503 1.1E-202 T 19-04-2016 ALIDE2_RS23495 b5d25659369e7474a3c5ec937d5ca2f8 514 Gene3D G3DSA:3.40.190.10 131 280 1.6E-50 T 19-04-2016 ALIDE2_RS23495 b5d25659369e7474a3c5ec937d5ca2f8 514 Gene3D G3DSA:3.10.105.10 281 484 2.0E-54 T 19-04-2016 ALIDE2_RS23495 b5d25659369e7474a3c5ec937d5ca2f8 514 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 430 3.8E-98 T 19-04-2016 IPR000914 Solute-binding protein family 5 domain ALIDE2_RS23495 b5d25659369e7474a3c5ec937d5ca2f8 514 PIRSF PIRSF002741 11 514 9.9E-117 T 19-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ALIDE2_RS03155 88075863979d4646da454427e6f74307 218 PANTHER PTHR30328:SF19 1 216 5.4E-28 T 19-04-2016 ALIDE2_RS03155 88075863979d4646da454427e6f74307 218 PANTHER PTHR30328 1 216 5.4E-28 T 19-04-2016 ALIDE2_RS03155 88075863979d4646da454427e6f74307 218 SUPERFAMILY SSF48498 97 212 8.53E-24 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS03155 88075863979d4646da454427e6f74307 218 SUPERFAMILY SSF46689 23 89 1.69E-13 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS03155 88075863979d4646da454427e6f74307 218 Gene3D G3DSA:1.10.357.10 78 213 5.7E-57 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS03155 88075863979d4646da454427e6f74307 218 Gene3D G3DSA:1.10.10.60 24 77 7.1E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS03155 88075863979d4646da454427e6f74307 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 73 1.3E-7 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 SUPERFAMILY SSF81653 287 384 2.35E-29 T 19-04-2016 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 Pfam PF00702 haloacid dehalogenase-like hydrolase 482 696 8.7E-44 T 19-04-2016 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 Gene3D G3DSA:3.40.1110.10 500 609 2.1E-21 T 19-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 7.8E-30 T 19-04-2016 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 701 7.8E-30 T 19-04-2016 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 607 618 7.8E-30 T 19-04-2016 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 485 499 7.8E-30 T 19-04-2016 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 334 348 7.8E-30 T 19-04-2016 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 717 7.8E-30 T 19-04-2016 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 Gene3D G3DSA:3.30.70.100 1 67 8.9E-11 T 19-04-2016 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 Gene3D G3DSA:2.70.150.10 248 385 2.9E-34 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 Gene3D G3DSA:3.40.50.1000 456 499 1.8E-55 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 Gene3D G3DSA:3.40.50.1000 610 751 1.8E-55 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 PANTHER PTHR24093 149 790 5.3E-225 T 19-04-2016 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 PANTHER PTHR24093 20 95 5.3E-225 T 19-04-2016 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 251 788 7.1E-118 T 19-04-2016 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 SUPERFAMILY SSF56784 483 503 1.94E-57 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 SUPERFAMILY SSF56784 540 786 1.94E-57 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 257 774 4.5E-91 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 223 788 3.1E-180 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 SUPERFAMILY SSF55008 1 68 1.22E-10 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 Pfam PF00403 Heavy-metal-associated domain 17 66 1.8E-8 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 Pfam PF00122 E1-E2 ATPase 255 476 4.7E-65 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 206 789 8.2E-178 T 19-04-2016 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 SUPERFAMILY SSF81665 227 288 5.89E-15 T 19-04-2016 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 SUPERFAMILY SSF81665 385 479 5.89E-15 T 19-04-2016 ALIDE2_RS16690 320e4b51b7aab71508875401775faad6 817 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 487 493 - T 19-04-2016 IPR018303 P-type ATPase, phosphorylation site ALIDE2_RS11100 8da9e9b0eb93600c70796efb22214bf3 183 PANTHER PTHR38588 2 160 8.9E-32 T 19-04-2016 ALIDE2_RS11100 8da9e9b0eb93600c70796efb22214bf3 183 Gene3D G3DSA:3.30.530.20 1 157 3.2E-61 T 19-04-2016 IPR023393 START-like domain ALIDE2_RS11100 8da9e9b0eb93600c70796efb22214bf3 183 SUPERFAMILY SSF55961 1 145 1.36E-38 T 19-04-2016 ALIDE2_RS11100 8da9e9b0eb93600c70796efb22214bf3 183 PANTHER PTHR38588:SF1 2 160 8.9E-32 T 19-04-2016 ALIDE2_RS11100 8da9e9b0eb93600c70796efb22214bf3 183 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 7 144 3.0E-37 T 19-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G ALIDE2_RS11525 438e46878e5e32a64dd2bf2b54e2db86 423 PANTHER PTHR21499 1 419 2.3E-156 T 19-04-2016 ALIDE2_RS11525 438e46878e5e32a64dd2bf2b54e2db86 423 SUPERFAMILY SSF55021 344 418 1.59E-23 T 19-04-2016 ALIDE2_RS11525 438e46878e5e32a64dd2bf2b54e2db86 423 SUPERFAMILY SSF53633 4 254 1.7E-74 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS11525 438e46878e5e32a64dd2bf2b54e2db86 423 Gene3D G3DSA:3.40.1160.10 1 259 1.7E-73 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS11525 438e46878e5e32a64dd2bf2b54e2db86 423 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 66 415 1.9E-113 T 19-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 ALIDE2_RS11525 438e46878e5e32a64dd2bf2b54e2db86 423 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 417 1.5E-124 T 19-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 ALIDE2_RS11525 438e46878e5e32a64dd2bf2b54e2db86 423 SUPERFAMILY SSF55021 261 339 2.62E-17 T 19-04-2016 ALIDE2_RS11525 438e46878e5e32a64dd2bf2b54e2db86 423 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 19-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 ALIDE2_RS11525 438e46878e5e32a64dd2bf2b54e2db86 423 Pfam PF01842 ACT domain 280 336 5.6E-9 T 19-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 ALIDE2_RS11525 438e46878e5e32a64dd2bf2b54e2db86 423 Pfam PF13840 ACT domain 354 413 1.6E-15 T 19-04-2016 IPR027795 GATS-like ACT domain ALIDE2_RS11525 438e46878e5e32a64dd2bf2b54e2db86 423 PIRSF PIRSF000726 57 423 8.1E-136 T 19-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 ALIDE2_RS11525 438e46878e5e32a64dd2bf2b54e2db86 423 PANTHER PTHR21499:SF27 1 419 2.3E-156 T 19-04-2016 ALIDE2_RS11525 438e46878e5e32a64dd2bf2b54e2db86 423 Pfam PF00696 Amino acid kinase family 3 233 6.9E-53 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS11525 438e46878e5e32a64dd2bf2b54e2db86 423 PRINTS PR00474 Glutamate 5-kinase family signature 156 183 3.3E-5 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 ALIDE2_RS11525 438e46878e5e32a64dd2bf2b54e2db86 423 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 3.3E-5 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 2.3E-135 T 19-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 1.9E-45 T 19-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 1.9E-45 T 19-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.9E-45 T 19-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.9E-45 T 19-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 1.9E-45 T 19-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 PANTHER PTHR10836:SF31 1 333 4.5E-226 T 19-04-2016 ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 Gene3D G3DSA:3.40.50.720 2 159 6.1E-79 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 151 6.7E-61 T 19-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 SMART SM00846 3 151 6.7E-97 T 19-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 19-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 SUPERFAMILY SSF55347 150 313 2.14E-74 T 19-04-2016 ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 SUPERFAMILY SSF51735 3 167 1.22E-66 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 5.2E-67 T 19-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 PIRSF PIRSF000149 1 333 2.2E-132 T 19-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 Gene3D G3DSA:3.30.360.10 160 315 4.6E-82 T 19-04-2016 ALIDE2_RS22375 9bd2407bd55d0d6a8cab6545d9c75072 333 PANTHER PTHR10836 1 333 4.5E-226 T 19-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 ALIDE2_RS15940 deced89e6ffa06a1864bc95e96c937eb 518 Gene3D G3DSA:2.30.38.10 335 407 1.3E-28 T 19-04-2016 ALIDE2_RS15940 deced89e6ffa06a1864bc95e96c937eb 518 Gene3D G3DSA:3.40.50.980 169 322 7.5E-37 T 19-04-2016 ALIDE2_RS15940 deced89e6ffa06a1864bc95e96c937eb 518 Gene3D G3DSA:3.40.50.980 3 168 1.2E-27 T 19-04-2016 ALIDE2_RS15940 deced89e6ffa06a1864bc95e96c937eb 518 Gene3D G3DSA:3.30.300.30 411 511 3.1E-30 T 19-04-2016 ALIDE2_RS15940 deced89e6ffa06a1864bc95e96c937eb 518 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS15940 deced89e6ffa06a1864bc95e96c937eb 518 Pfam PF00501 AMP-binding enzyme 14 416 2.7E-91 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS15940 deced89e6ffa06a1864bc95e96c937eb 518 SUPERFAMILY SSF56801 3 513 5.36E-142 T 19-04-2016 ALIDE2_RS15940 deced89e6ffa06a1864bc95e96c937eb 518 PANTHER PTHR24096 3 511 9.5E-147 T 19-04-2016 ALIDE2_RS15940 deced89e6ffa06a1864bc95e96c937eb 518 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 500 6.6E-19 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS01760 394fe96f2f61f4e4e9947b3dfb3e924a 224 ProSitePatterns PS00474 Ribosomal protein L3 signature. 109 132 - T 19-04-2016 IPR019926 Ribosomal protein L3, conserved site ALIDE2_RS01760 394fe96f2f61f4e4e9947b3dfb3e924a 224 Gene3D G3DSA:2.40.30.10 166 221 1.9E-8 T 19-04-2016 ALIDE2_RS01760 394fe96f2f61f4e4e9947b3dfb3e924a 224 Gene3D G3DSA:2.40.30.10 8 37 1.9E-8 T 19-04-2016 ALIDE2_RS01760 394fe96f2f61f4e4e9947b3dfb3e924a 224 Gene3D G3DSA:4.10.960.10 99 165 1.3E-25 T 19-04-2016 ALIDE2_RS01760 394fe96f2f61f4e4e9947b3dfb3e924a 224 PANTHER PTHR11229 1 216 6.0E-104 T 19-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01760 394fe96f2f61f4e4e9947b3dfb3e924a 224 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 6 215 37.778 T 19-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01760 394fe96f2f61f4e4e9947b3dfb3e924a 224 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 8 212 7.2E-83 T 19-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01760 394fe96f2f61f4e4e9947b3dfb3e924a 224 Pfam PF00297 Ribosomal protein L3 62 190 1.1E-15 T 19-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01760 394fe96f2f61f4e4e9947b3dfb3e924a 224 SUPERFAMILY SSF50447 6 219 3.53E-74 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain ALIDE2_RS08230 b100ec24b2ac8dae344f773137ee588d 429 Gene3D G3DSA:1.25.40.10 94 121 4.2E-5 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS08230 b100ec24b2ac8dae344f773137ee588d 429 Gene3D G3DSA:1.25.40.10 347 422 4.2E-5 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS08230 b100ec24b2ac8dae344f773137ee588d 429 Pfam PF07219 HemY protein N-terminus 26 144 8.3E-26 T 19-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 ALIDE2_RS08230 b100ec24b2ac8dae344f773137ee588d 429 SUPERFAMILY SSF48452 97 121 9.49E-5 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS08230 b100ec24b2ac8dae344f773137ee588d 429 SUPERFAMILY SSF48452 348 422 9.49E-5 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS08230 b100ec24b2ac8dae344f773137ee588d 429 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 422 1.6E-67 T 19-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 ALIDE2_RS07505 5540184a83a0da19a70ce87773d8b068 337 PIRSF PIRSF017082 1 336 1.4E-49 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS07505 5540184a83a0da19a70ce87773d8b068 337 SUPERFAMILY SSF53850 136 304 1.19E-5 T 19-04-2016 ALIDE2_RS07505 5540184a83a0da19a70ce87773d8b068 337 PANTHER PTHR30349:SF32 11 292 1.0E-44 T 19-04-2016 ALIDE2_RS07505 5540184a83a0da19a70ce87773d8b068 337 PANTHER PTHR30349 11 292 1.0E-44 T 19-04-2016 ALIDE2_RS07505 5540184a83a0da19a70ce87773d8b068 337 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 60 332 5.1E-45 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22590 73a9254dc0ee61abb65f9264500ed348 224 PANTHER PTHR26402:SF518 1 220 1.2E-78 T 19-04-2016 ALIDE2_RS22590 73a9254dc0ee61abb65f9264500ed348 224 SMART SM00448 1 113 2.0E-35 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS22590 73a9254dc0ee61abb65f9264500ed348 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 3.1E-22 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS22590 73a9254dc0ee61abb65f9264500ed348 224 PANTHER PTHR26402 1 220 1.2E-78 T 19-04-2016 ALIDE2_RS22590 73a9254dc0ee61abb65f9264500ed348 224 Pfam PF00072 Response regulator receiver domain 3 113 1.0E-24 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS22590 73a9254dc0ee61abb65f9264500ed348 224 Gene3D G3DSA:3.40.50.2300 1 120 6.6E-36 T 19-04-2016 ALIDE2_RS22590 73a9254dc0ee61abb65f9264500ed348 224 SMART SM00862 146 219 6.3E-25 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS22590 73a9254dc0ee61abb65f9264500ed348 224 Gene3D G3DSA:1.10.10.10 125 220 2.4E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22590 73a9254dc0ee61abb65f9264500ed348 224 SUPERFAMILY SSF52172 1 174 4.25E-35 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS15585 13ae5d659facef8ebd33fe6e9d6229a8 168 Pfam PF01584 CheW-like domain 21 157 9.8E-37 T 19-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ALIDE2_RS15585 13ae5d659facef8ebd33fe6e9d6229a8 168 Gene3D G3DSA:2.40.50.180 59 94 7.5E-9 T 19-04-2016 ALIDE2_RS15585 13ae5d659facef8ebd33fe6e9d6229a8 168 SMART SM00260 17 154 1.8E-38 T 19-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ALIDE2_RS15585 13ae5d659facef8ebd33fe6e9d6229a8 168 PANTHER PTHR22617 20 167 2.6E-43 T 19-04-2016 ALIDE2_RS15585 13ae5d659facef8ebd33fe6e9d6229a8 168 Gene3D G3DSA:2.30.30.40 95 147 4.7E-4 T 19-04-2016 ALIDE2_RS15585 13ae5d659facef8ebd33fe6e9d6229a8 168 SUPERFAMILY SSF50341 19 159 2.88E-38 T 19-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ALIDE2_RS16015 2e585ae8357e5b73e90b611e9627e137 683 PANTHER PTHR30069:SF13 60 258 6.3E-52 T 19-04-2016 ALIDE2_RS16015 2e585ae8357e5b73e90b611e9627e137 683 PANTHER PTHR30069:SF13 293 575 6.3E-52 T 19-04-2016 ALIDE2_RS16015 2e585ae8357e5b73e90b611e9627e137 683 PANTHER PTHR30069 60 258 6.3E-52 T 19-04-2016 ALIDE2_RS16015 2e585ae8357e5b73e90b611e9627e137 683 PANTHER PTHR30069 293 575 6.3E-52 T 19-04-2016 ALIDE2_RS16015 2e585ae8357e5b73e90b611e9627e137 683 Gene3D G3DSA:2.170.130.10 31 162 2.8E-27 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS16015 2e585ae8357e5b73e90b611e9627e137 683 Gene3D G3DSA:2.40.170.20 170 683 1.1E-65 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS16015 2e585ae8357e5b73e90b611e9627e137 683 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 158 4.9E-17 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS16015 2e585ae8357e5b73e90b611e9627e137 683 SUPERFAMILY SSF56935 41 274 2.66E-88 T 19-04-2016 ALIDE2_RS16015 2e585ae8357e5b73e90b611e9627e137 683 SUPERFAMILY SSF56935 301 683 2.66E-88 T 19-04-2016 ALIDE2_RS16015 2e585ae8357e5b73e90b611e9627e137 683 Pfam PF00593 TonB dependent receptor 441 681 6.7E-21 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS11385 a49a5b5a51ab33d80c78830fe209772b 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 6 147 2.0E-49 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 ALIDE2_RS11385 a49a5b5a51ab33d80c78830fe209772b 149 SUPERFAMILY SSF52304 5 148 2.35E-56 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 ALIDE2_RS11385 a49a5b5a51ab33d80c78830fe209772b 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 9 26 - T 19-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 ALIDE2_RS11385 a49a5b5a51ab33d80c78830fe209772b 149 PANTHER PTHR21272 1 149 7.1E-81 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 ALIDE2_RS11385 a49a5b5a51ab33d80c78830fe209772b 149 Gene3D G3DSA:3.40.50.9100 4 147 9.1E-62 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 ALIDE2_RS11385 a49a5b5a51ab33d80c78830fe209772b 149 PIRSF PIRSF001399 2 149 5.8E-59 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 ALIDE2_RS11385 a49a5b5a51ab33d80c78830fe209772b 149 Pfam PF01220 Dehydroquinase class II 6 145 4.0E-57 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 ALIDE2_RS11385 a49a5b5a51ab33d80c78830fe209772b 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 147 4.2E-54 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 ALIDE2_RS11385 a49a5b5a51ab33d80c78830fe209772b 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 65.924 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 ALIDE2_RS02635 4f655ed23ffb8a3f3b1615112f5e101d 313 SUPERFAMILY SSF52540 4 231 9.15E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02635 4f655ed23ffb8a3f3b1615112f5e101d 313 PANTHER PTHR24220 6 243 5.5E-88 T 19-04-2016 ALIDE2_RS02635 4f655ed23ffb8a3f3b1615112f5e101d 313 PANTHER PTHR24220:SF165 6 243 5.5E-88 T 19-04-2016 ALIDE2_RS02635 4f655ed23ffb8a3f3b1615112f5e101d 313 Gene3D G3DSA:3.40.50.300 2 234 9.5E-70 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02635 4f655ed23ffb8a3f3b1615112f5e101d 313 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS02635 4f655ed23ffb8a3f3b1615112f5e101d 313 Pfam PF00005 ABC transporter 21 169 5.2E-27 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS02635 4f655ed23ffb8a3f3b1615112f5e101d 313 SMART SM00382 29 226 2.6E-13 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS18585 7657f9aaa7dc38249a166fea154e3206 665 Gene3D G3DSA:3.30.300.30 534 643 2.0E-25 T 19-04-2016 ALIDE2_RS18585 7657f9aaa7dc38249a166fea154e3206 665 Pfam PF13193 AMP-binding enzyme C-terminal domain 548 630 2.9E-25 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS18585 7657f9aaa7dc38249a166fea154e3206 665 PANTHER PTHR24095 13 661 3.2E-251 T 19-04-2016 ALIDE2_RS18585 7657f9aaa7dc38249a166fea154e3206 665 Gene3D G3DSA:3.40.50.980 277 437 1.5E-27 T 19-04-2016 ALIDE2_RS18585 7657f9aaa7dc38249a166fea154e3206 665 Pfam PF00501 AMP-binding enzyme 102 539 4.3E-89 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS18585 7657f9aaa7dc38249a166fea154e3206 665 SUPERFAMILY SSF56801 20 661 7.2E-167 T 19-04-2016 ALIDE2_RS18585 7657f9aaa7dc38249a166fea154e3206 665 ProSitePatterns PS00455 Putative AMP-binding domain signature. 271 282 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS18585 7657f9aaa7dc38249a166fea154e3206 665 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 13 665 49.714 T 19-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 ALIDE2_RS18585 7657f9aaa7dc38249a166fea154e3206 665 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 36 91 8.7E-19 T 19-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 ALIDE2_RS18585 7657f9aaa7dc38249a166fea154e3206 665 Gene3D G3DSA:2.30.38.10 448 525 4.6E-9 T 19-04-2016 ALIDE2_RS18585 7657f9aaa7dc38249a166fea154e3206 665 Gene3D G3DSA:3.40.50.980 101 276 6.5E-38 T 19-04-2016 ALIDE2_RS18585 7657f9aaa7dc38249a166fea154e3206 665 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 32 663 1.6E-284 T 19-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 ALIDE2_RS06000 46f34a37f8fd756ddd7e1fa4dc71d1cc 490 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 490 154.837 T 19-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 ALIDE2_RS06000 46f34a37f8fd756ddd7e1fa4dc71d1cc 490 Gene3D G3DSA:3.40.50.880 263 459 1.3E-34 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS06000 46f34a37f8fd756ddd7e1fa4dc71d1cc 490 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 13 237 5.1E-24 T 19-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE2_RS06000 46f34a37f8fd756ddd7e1fa4dc71d1cc 490 SUPERFAMILY SSF52317 265 460 1.19E-32 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS06000 46f34a37f8fd756ddd7e1fa4dc71d1cc 490 Gene3D G3DSA:3.40.50.300 11 250 3.0E-39 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06000 46f34a37f8fd756ddd7e1fa4dc71d1cc 490 PANTHER PTHR21343:SF1 10 461 1.2E-161 T 19-04-2016 ALIDE2_RS06000 46f34a37f8fd756ddd7e1fa4dc71d1cc 490 PANTHER PTHR21343 10 461 1.2E-161 T 19-04-2016 ALIDE2_RS06000 46f34a37f8fd756ddd7e1fa4dc71d1cc 490 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 264 453 1.6E-43 T 19-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 ALIDE2_RS06000 46f34a37f8fd756ddd7e1fa4dc71d1cc 490 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 13 454 2.9E-120 T 19-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 ALIDE2_RS06000 46f34a37f8fd756ddd7e1fa4dc71d1cc 490 SUPERFAMILY SSF52540 12 251 1.52E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11165 10c10f0d4454706146a1b526d4dd3c97 90 Pfam PF01925 Sulfite exporter TauE/SafE 5 86 1.2E-8 T 19-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 3.7E-11 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 3.7E-11 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 593 3.7E-11 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 3.7E-11 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 SUPERFAMILY SSF55874 437 599 8.51E-30 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 PANTHER PTHR24423 349 606 6.7E-49 T 19-04-2016 ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 PANTHER PTHR24423 254 282 6.7E-49 T 19-04-2016 ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 Gene3D G3DSA:1.10.287.130 373 427 1.1E-4 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 SUPERFAMILY SSF47384 369 439 1.51E-8 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 483 595 3.6E-15 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 SMART SM00388 372 442 2.3E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 Gene3D G3DSA:3.30.565.10 428 598 5.4E-29 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 SUPERFAMILY SSF53850 41 263 7.34E-12 T 19-04-2016 ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 439 1.5E-9 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 SMART SM00387 483 596 1.9E-21 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 29 274 1.8E-37 T 19-04-2016 ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 PANTHER PTHR24423:SF497 349 606 6.7E-49 T 19-04-2016 ALIDE2_RS04640 9c7a0a45cbb8d9110bf72300c4cf968a 606 PANTHER PTHR24423:SF497 254 282 6.7E-49 T 19-04-2016 ALIDE2_RS22950 1c5e401e2773d2dbc71ca5158332c817 373 Pfam PF03054 tRNA methyl transferase 7 368 9.4E-131 T 19-04-2016 ALIDE2_RS22950 1c5e401e2773d2dbc71ca5158332c817 373 Gene3D G3DSA:2.40.30.10 291 370 2.9E-27 T 19-04-2016 ALIDE2_RS22950 1c5e401e2773d2dbc71ca5158332c817 373 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 369 38.514 T 19-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 ALIDE2_RS22950 1c5e401e2773d2dbc71ca5158332c817 373 Gene3D G3DSA:2.30.30.280 215 290 8.5E-31 T 19-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 ALIDE2_RS22950 1c5e401e2773d2dbc71ca5158332c817 373 SUPERFAMILY SSF52402 5 246 5.07E-57 T 19-04-2016 ALIDE2_RS22950 1c5e401e2773d2dbc71ca5158332c817 373 Gene3D G3DSA:3.40.50.620 4 213 8.6E-97 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS22950 1c5e401e2773d2dbc71ca5158332c817 373 PANTHER PTHR11933:SF10 1 371 1.3E-179 T 19-04-2016 ALIDE2_RS22950 1c5e401e2773d2dbc71ca5158332c817 373 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 368 1.8E-125 T 19-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 ALIDE2_RS22950 1c5e401e2773d2dbc71ca5158332c817 373 PANTHER PTHR11933 1 371 1.3E-179 T 19-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 ALIDE2_RS17275 5a01441a0bb4ee1f980121479462a6db 159 Pfam PF04214 Protein of unknown function, DUF 61 124 2.7E-31 T 19-04-2016 IPR007332 Protein of unknown function DUF411 ALIDE2_RS04385 b9b63fe93ccec5c1c6ae23432be1eca3 122 Pfam PF06271 RDD family 11 83 1.7E-7 T 19-04-2016 IPR010432 RDD ALIDE2_RS12305 ec5c4dad3875b3f41524f0f3213544c2 438 Gene3D G3DSA:3.40.50.1820 106 233 2.8E-8 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS12305 ec5c4dad3875b3f41524f0f3213544c2 438 Gene3D G3DSA:3.40.50.1820 292 418 2.8E-8 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS12305 ec5c4dad3875b3f41524f0f3213544c2 438 PIRSF PIRSF020818 1 429 3.5E-182 T 19-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase ALIDE2_RS12305 ec5c4dad3875b3f41524f0f3213544c2 438 Pfam PF06850 PHB de-polymerase C-terminus 213 419 2.2E-87 T 19-04-2016 IPR009656 PHB de-polymerase, C-terminal ALIDE2_RS12305 ec5c4dad3875b3f41524f0f3213544c2 438 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 418 1.1E-170 T 19-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase ALIDE2_RS12305 ec5c4dad3875b3f41524f0f3213544c2 438 SUPERFAMILY SSF53474 107 417 4.53E-30 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS06665 506dd77e14c974b5e6e8af4bb00eea5d 495 PANTHER PTHR11119 217 477 1.4E-112 T 19-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS06665 506dd77e14c974b5e6e8af4bb00eea5d 495 PANTHER PTHR11119 5 172 1.4E-112 T 19-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS06665 506dd77e14c974b5e6e8af4bb00eea5d 495 Pfam PF00860 Permease family 211 442 4.0E-69 T 19-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS06665 506dd77e14c974b5e6e8af4bb00eea5d 495 Pfam PF00860 Permease family 18 172 6.1E-35 T 19-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS06665 506dd77e14c974b5e6e8af4bb00eea5d 495 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 15 473 4.9E-114 T 19-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 ALIDE2_RS06665 506dd77e14c974b5e6e8af4bb00eea5d 495 PANTHER PTHR11119:SF3 217 477 1.4E-112 T 19-04-2016 ALIDE2_RS06665 506dd77e14c974b5e6e8af4bb00eea5d 495 PANTHER PTHR11119:SF3 5 172 1.4E-112 T 19-04-2016 ALIDE2_RS18115 7b4b0857101d5af974f3855645537da5 1355 Pfam PF02514 CobN/Magnesium Chelatase 126 1226 6.4E-279 T 19-04-2016 IPR003672 CobN/magnesium chelatase GO:0009058 ALIDE2_RS18115 7b4b0857101d5af974f3855645537da5 1355 PANTHER PTHR23304:SF113 257 1234 1.6E-220 T 19-04-2016 ALIDE2_RS18115 7b4b0857101d5af974f3855645537da5 1355 PANTHER PTHR23304 257 1234 1.6E-220 T 19-04-2016 ALIDE2_RS19620 01df4c6ff9a555a71ccc353ff8e3fe87 77 Pfam PF11137 Protein of unknown function (DUF2909) 4 67 1.7E-27 T 19-04-2016 IPR021313 Protein of unknown function DUF2909 ALIDE2_RS03440 60884bef050077ad32ea579f060458f5 520 PANTHER PTHR32309:SF13 13 311 6.9E-47 T 19-04-2016 ALIDE2_RS03440 60884bef050077ad32ea579f060458f5 520 PANTHER PTHR32309:SF13 331 487 6.9E-47 T 19-04-2016 ALIDE2_RS03440 60884bef050077ad32ea579f060458f5 520 Pfam PF02706 Chain length determinant protein 16 149 5.1E-11 T 19-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 ALIDE2_RS03440 60884bef050077ad32ea579f060458f5 520 PANTHER PTHR32309 13 311 6.9E-47 T 19-04-2016 ALIDE2_RS03440 60884bef050077ad32ea579f060458f5 520 PANTHER PTHR32309 331 487 6.9E-47 T 19-04-2016 ALIDE2_RS03440 60884bef050077ad32ea579f060458f5 520 TIGRFAM TIGR03007 pepcterm_ChnLen: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily 7 509 2.0E-157 T 19-04-2016 IPR014345 PEP-CTERM locus polysaccharide chain length determinant ALIDE2_RS03440 60884bef050077ad32ea579f060458f5 520 Pfam PF13807 G-rich domain on putative tyrosine kinase 369 449 8.1E-11 T 19-04-2016 IPR032807 Tyrosine kinase, G-rich domain ALIDE2_RS19520 6b76df3f999d6810322464ec0d7107a8 477 Gene3D G3DSA:3.30.1330.120 279 400 6.4E-20 T 19-04-2016 ALIDE2_RS19520 6b76df3f999d6810322464ec0d7107a8 477 Pfam PF03972 MmgE/PrpD family 12 428 2.5E-98 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS19520 6b76df3f999d6810322464ec0d7107a8 477 SUPERFAMILY SSF103378 8 458 1.44E-97 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS19520 6b76df3f999d6810322464ec0d7107a8 477 PANTHER PTHR16943 5 427 5.2E-83 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS19520 6b76df3f999d6810322464ec0d7107a8 477 PANTHER PTHR16943:SF8 5 427 5.2E-83 T 19-04-2016 ALIDE2_RS08300 b3cecabd3326dec60bf3bc9400df34e2 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 75 240 7.7E-9 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS08300 b3cecabd3326dec60bf3bc9400df34e2 370 PANTHER PTHR30097 54 366 3.5E-17 T 19-04-2016 ALIDE2_RS08300 b3cecabd3326dec60bf3bc9400df34e2 370 SUPERFAMILY SSF111369 108 218 1.18E-5 T 19-04-2016 ALIDE2_RS08300 b3cecabd3326dec60bf3bc9400df34e2 370 PANTHER PTHR30097:SF4 54 366 3.5E-17 T 19-04-2016 ALIDE2_RS08300 b3cecabd3326dec60bf3bc9400df34e2 370 Gene3D G3DSA:2.40.50.100 192 224 4.2E-7 T 19-04-2016 ALIDE2_RS08300 b3cecabd3326dec60bf3bc9400df34e2 370 Gene3D G3DSA:2.40.50.100 111 125 4.2E-7 T 19-04-2016 ALIDE2_RS20225 5ff6e299a3226c010792254082fbea2c 128 SUPERFAMILY SSF52172 3 120 4.27E-36 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS20225 5ff6e299a3226c010792254082fbea2c 128 SMART SM00448 3 117 1.0E-42 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20225 5ff6e299a3226c010792254082fbea2c 128 Pfam PF00072 Response regulator receiver domain 5 117 3.7E-27 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20225 5ff6e299a3226c010792254082fbea2c 128 PANTHER PTHR26402 3 120 3.2E-38 T 19-04-2016 ALIDE2_RS20225 5ff6e299a3226c010792254082fbea2c 128 Gene3D G3DSA:3.40.50.2300 3 121 3.1E-37 T 19-04-2016 ALIDE2_RS02035 b58f09fa3f4a3083ae1c16295e0bc783 231 PANTHER PTHR23105:SF5 19 229 5.5E-75 T 19-04-2016 ALIDE2_RS02035 b58f09fa3f4a3083ae1c16295e0bc783 231 Gene3D G3DSA:3.30.190.20 161 227 3.9E-46 T 19-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 ALIDE2_RS02035 b58f09fa3f4a3083ae1c16295e0bc783 231 Gene3D G3DSA:3.30.190.20 17 68 3.9E-46 T 19-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 ALIDE2_RS02035 b58f09fa3f4a3083ae1c16295e0bc783 231 PANTHER PTHR23105 19 229 5.5E-75 T 19-04-2016 ALIDE2_RS02035 b58f09fa3f4a3083ae1c16295e0bc783 231 SUPERFAMILY SSF56808 6 226 1.19E-79 T 19-04-2016 IPR023674 Ribosomal protein L1-like ALIDE2_RS02035 b58f09fa3f4a3083ae1c16295e0bc783 231 Gene3D G3DSA:3.40.50.790 69 159 6.7E-40 T 19-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich ALIDE2_RS02035 b58f09fa3f4a3083ae1c16295e0bc783 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 5.9E-102 T 19-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS02035 b58f09fa3f4a3083ae1c16295e0bc783 231 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 6.0E-49 T 19-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein ALIDE2_RS02035 b58f09fa3f4a3083ae1c16295e0bc783 231 PIRSF PIRSF002155 1 227 5.1E-75 T 19-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS02035 b58f09fa3f4a3083ae1c16295e0bc783 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 19-04-2016 IPR023673 Ribosomal protein L1, conserved site ALIDE2_RS02035 b58f09fa3f4a3083ae1c16295e0bc783 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.486 T 19-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS08850 5f3a02155f389045b669c4c174260197 362 Pfam PF01436 NHL repeat 274 298 6.0E-5 T 19-04-2016 IPR001258 NHL repeat GO:0005515 ALIDE2_RS08850 5f3a02155f389045b669c4c174260197 362 Pfam PF01436 NHL repeat 110 136 1.5E-6 T 19-04-2016 IPR001258 NHL repeat GO:0005515 ALIDE2_RS08850 5f3a02155f389045b669c4c174260197 362 Pfam PF01436 NHL repeat 57 82 2.5E-5 T 19-04-2016 IPR001258 NHL repeat GO:0005515 ALIDE2_RS08850 5f3a02155f389045b669c4c174260197 362 Gene3D G3DSA:2.120.10.30 49 358 3.2E-60 T 19-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like ALIDE2_RS08850 5f3a02155f389045b669c4c174260197 362 PANTHER PTHR24104 49 356 7.2E-26 T 19-04-2016 ALIDE2_RS08850 5f3a02155f389045b669c4c174260197 362 SUPERFAMILY SSF101898 54 360 7.59E-35 T 19-04-2016 ALIDE2_RS08310 031e274bef0b4bfd578f31bf922be37d 273 PANTHER PTHR31756:SF3 1 270 5.5E-96 T 19-04-2016 ALIDE2_RS08310 031e274bef0b4bfd578f31bf922be37d 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 3 272 74.612 T 19-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein ALIDE2_RS08310 031e274bef0b4bfd578f31bf922be37d 273 Pfam PF03618 Kinase/pyrophosphorylase 6 263 6.2E-82 T 19-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 ALIDE2_RS08310 031e274bef0b4bfd578f31bf922be37d 273 PANTHER PTHR31756 1 270 5.5E-96 T 19-04-2016 ALIDE2_RS10975 1a63108c35ead3358c172f54c620cd97 508 Gene3D G3DSA:1.10.10.60 16 40 3.4E-5 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS10975 1a63108c35ead3358c172f54c620cd97 508 PANTHER PTHR35004:SF2 2 448 6.2E-77 T 19-04-2016 ALIDE2_RS10975 1a63108c35ead3358c172f54c620cd97 508 Pfam PF00665 Integrase core domain 130 256 8.7E-18 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS10975 1a63108c35ead3358c172f54c620cd97 508 Gene3D G3DSA:3.30.420.10 162 300 1.6E-4 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS10975 1a63108c35ead3358c172f54c620cd97 508 PANTHER PTHR35004 2 448 6.2E-77 T 19-04-2016 ALIDE2_RS03370 1a63108c35ead3358c172f54c620cd97 508 Gene3D G3DSA:1.10.10.60 16 40 3.4E-5 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS03370 1a63108c35ead3358c172f54c620cd97 508 PANTHER PTHR35004:SF2 2 448 6.2E-77 T 19-04-2016 ALIDE2_RS03370 1a63108c35ead3358c172f54c620cd97 508 Pfam PF00665 Integrase core domain 130 256 8.7E-18 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS03370 1a63108c35ead3358c172f54c620cd97 508 Gene3D G3DSA:3.30.420.10 162 300 1.6E-4 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS03370 1a63108c35ead3358c172f54c620cd97 508 PANTHER PTHR35004 2 448 6.2E-77 T 19-04-2016 ALIDE2_RS17520 1a63108c35ead3358c172f54c620cd97 508 Gene3D G3DSA:1.10.10.60 16 40 3.4E-5 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS17520 1a63108c35ead3358c172f54c620cd97 508 PANTHER PTHR35004:SF2 2 448 6.2E-77 T 19-04-2016 ALIDE2_RS17520 1a63108c35ead3358c172f54c620cd97 508 Pfam PF00665 Integrase core domain 130 256 8.7E-18 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS17520 1a63108c35ead3358c172f54c620cd97 508 Gene3D G3DSA:3.30.420.10 162 300 1.6E-4 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS17520 1a63108c35ead3358c172f54c620cd97 508 PANTHER PTHR35004 2 448 6.2E-77 T 19-04-2016 ALIDE2_RS14735 1a63108c35ead3358c172f54c620cd97 508 Gene3D G3DSA:1.10.10.60 16 40 3.4E-5 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS14735 1a63108c35ead3358c172f54c620cd97 508 PANTHER PTHR35004:SF2 2 448 6.2E-77 T 19-04-2016 ALIDE2_RS14735 1a63108c35ead3358c172f54c620cd97 508 Pfam PF00665 Integrase core domain 130 256 8.7E-18 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS14735 1a63108c35ead3358c172f54c620cd97 508 Gene3D G3DSA:3.30.420.10 162 300 1.6E-4 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS14735 1a63108c35ead3358c172f54c620cd97 508 PANTHER PTHR35004 2 448 6.2E-77 T 19-04-2016 ALIDE2_RS10740 1a63108c35ead3358c172f54c620cd97 508 Gene3D G3DSA:1.10.10.60 16 40 3.4E-5 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS10740 1a63108c35ead3358c172f54c620cd97 508 PANTHER PTHR35004:SF2 2 448 6.2E-77 T 19-04-2016 ALIDE2_RS10740 1a63108c35ead3358c172f54c620cd97 508 Pfam PF00665 Integrase core domain 130 256 8.7E-18 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS10740 1a63108c35ead3358c172f54c620cd97 508 Gene3D G3DSA:3.30.420.10 162 300 1.6E-4 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS10740 1a63108c35ead3358c172f54c620cd97 508 PANTHER PTHR35004 2 448 6.2E-77 T 19-04-2016 ALIDE2_RS21395 1a63108c35ead3358c172f54c620cd97 508 Gene3D G3DSA:1.10.10.60 16 40 3.4E-5 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS21395 1a63108c35ead3358c172f54c620cd97 508 PANTHER PTHR35004:SF2 2 448 6.2E-77 T 19-04-2016 ALIDE2_RS21395 1a63108c35ead3358c172f54c620cd97 508 Pfam PF00665 Integrase core domain 130 256 8.7E-18 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS21395 1a63108c35ead3358c172f54c620cd97 508 Gene3D G3DSA:3.30.420.10 162 300 1.6E-4 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS21395 1a63108c35ead3358c172f54c620cd97 508 PANTHER PTHR35004 2 448 6.2E-77 T 19-04-2016 ALIDE2_RS04395 1a63108c35ead3358c172f54c620cd97 508 Gene3D G3DSA:1.10.10.60 16 40 3.4E-5 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS04395 1a63108c35ead3358c172f54c620cd97 508 PANTHER PTHR35004:SF2 2 448 6.2E-77 T 19-04-2016 ALIDE2_RS04395 1a63108c35ead3358c172f54c620cd97 508 Pfam PF00665 Integrase core domain 130 256 8.7E-18 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS04395 1a63108c35ead3358c172f54c620cd97 508 Gene3D G3DSA:3.30.420.10 162 300 1.6E-4 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS04395 1a63108c35ead3358c172f54c620cd97 508 PANTHER PTHR35004 2 448 6.2E-77 T 19-04-2016 ALIDE2_RS12215 a70c2123ebe300db02fe1838a323b13e 231 SUPERFAMILY SSF56529 20 230 6.93E-71 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS12215 a70c2123ebe300db02fe1838a323b13e 231 PANTHER PTHR11820 7 228 1.9E-85 T 19-04-2016 ALIDE2_RS12215 a70c2123ebe300db02fe1838a323b13e 231 PANTHER PTHR11820:SF7 7 228 1.9E-85 T 19-04-2016 ALIDE2_RS12215 a70c2123ebe300db02fe1838a323b13e 231 Gene3D G3DSA:3.90.850.10 22 229 2.0E-80 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS12215 a70c2123ebe300db02fe1838a323b13e 231 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 26 228 9.4E-54 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 Gene3D G3DSA:3.30.450.20 355 473 3.5E-24 T 19-04-2016 ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 Pfam PF13426 PAS domain 374 474 3.2E-9 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 SUPERFAMILY SSF55073 621 785 2.25E-45 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 Gene3D G3DSA:3.20.20.450 797 1045 8.3E-91 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 Gene3D G3DSA:3.30.70.270 618 791 1.1E-52 T 19-04-2016 ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 Pfam PF00990 Diguanylate cyclase, GGDEF domain 616 778 1.7E-45 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 SMART SM00052 793 1038 5.8E-116 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 Pfam PF03924 CHASE domain 81 265 1.3E-38 T 19-04-2016 IPR006189 CHASE domain ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 SMART SM00091 362 429 7.1E-8 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 SMART SM00091 489 555 5.6 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 SMART SM01079 78 276 2.5E-44 T 19-04-2016 IPR006189 CHASE domain ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 SMART SM00267 605 783 3.0E-60 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 Gene3D G3DSA:3.30.450.20 474 595 3.8E-13 T 19-04-2016 ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 PANTHER PTHR33121:SF13 743 1045 5.5E-73 T 19-04-2016 ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 PANTHER PTHR33121:SF13 172 180 5.5E-73 T 19-04-2016 ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 Pfam PF00563 EAL domain 800 1033 2.7E-68 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 SUPERFAMILY SSF55785 349 474 5.06E-23 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 PANTHER PTHR33121 743 1045 5.5E-73 T 19-04-2016 ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 PANTHER PTHR33121 172 180 5.5E-73 T 19-04-2016 ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 358 484 2.7E-26 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 SUPERFAMILY SSF55785 474 594 8.03E-11 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 615 781 1.3E-38 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 SUPERFAMILY SSF141868 799 1046 2.35E-84 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS12165 d88a85a59627bfa7c7dca69f0408eddd 1054 SMART SM00086 436 477 7.1E-4 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS03970 5a0595f74640250f7156cbbf4d91c970 227 PIRSF PIRSF016482 16 227 6.4E-55 T 19-04-2016 IPR007445 Pilus assembly protein, PilO ALIDE2_RS03970 5a0595f74640250f7156cbbf4d91c970 227 Pfam PF04350 Pilus assembly protein, PilO 67 211 3.3E-51 T 19-04-2016 IPR007445 Pilus assembly protein, PilO ALIDE2_RS03970 5a0595f74640250f7156cbbf4d91c970 227 PANTHER PTHR39555:SF1 18 223 1.3E-44 T 19-04-2016 ALIDE2_RS03970 5a0595f74640250f7156cbbf4d91c970 227 PANTHER PTHR39555 18 223 1.3E-44 T 19-04-2016 ALIDE2_RS03970 5a0595f74640250f7156cbbf4d91c970 227 Gene3D G3DSA:3.30.70.60 112 220 5.1E-38 T 19-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 ALIDE2_RS03000 e71f09d169a0505c4782f3cc2efa081f 162 PANTHER PTHR34700 93 160 2.6E-21 T 19-04-2016 ALIDE2_RS03000 e71f09d169a0505c4782f3cc2efa081f 162 Pfam PF04972 BON domain 41 101 4.2E-10 T 19-04-2016 IPR007055 BON domain ALIDE2_RS03000 e71f09d169a0505c4782f3cc2efa081f 162 SMART SM00257 109 158 1.8E-10 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS03000 e71f09d169a0505c4782f3cc2efa081f 162 Pfam PF01476 LysM domain 110 158 6.0E-9 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS03000 e71f09d169a0505c4782f3cc2efa081f 162 Gene3D G3DSA:3.10.350.10 107 158 9.3E-11 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS03000 e71f09d169a0505c4782f3cc2efa081f 162 SUPERFAMILY SSF54106 108 158 7.59E-7 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS11590 58758a3cf50fc9c2a0204c2a3fab3522 328 PANTHER PTHR10314:SF124 8 322 1.9E-170 T 19-04-2016 ALIDE2_RS11590 58758a3cf50fc9c2a0204c2a3fab3522 328 PANTHER PTHR10314 8 322 1.9E-170 T 19-04-2016 ALIDE2_RS11590 58758a3cf50fc9c2a0204c2a3fab3522 328 SUPERFAMILY SSF53686 10 318 3.93E-95 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS11590 58758a3cf50fc9c2a0204c2a3fab3522 328 Gene3D G3DSA:3.40.50.1100 76 322 1.8E-70 T 19-04-2016 ALIDE2_RS11590 58758a3cf50fc9c2a0204c2a3fab3522 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 310 5.9E-75 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 Gene3D G3DSA:3.40.50.880 3 189 1.1E-71 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 PANTHER PTHR11922:SF7 3 188 3.9E-99 T 19-04-2016 ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 PRINTS PR00097 Anthranilate synthase component II signature 4 18 4.4E-35 T 19-04-2016 ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 PRINTS PR00097 Anthranilate synthase component II signature 76 87 4.4E-35 T 19-04-2016 ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 PRINTS PR00097 Anthranilate synthase component II signature 121 133 4.4E-35 T 19-04-2016 ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 PRINTS PR00097 Anthranilate synthase component II signature 166 179 4.4E-35 T 19-04-2016 ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 PRINTS PR00097 Anthranilate synthase component II signature 101 109 4.4E-35 T 19-04-2016 ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 PRINTS PR00097 Anthranilate synthase component II signature 49 58 4.4E-35 T 19-04-2016 ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 Pfam PF00117 Glutamine amidotransferase class-I 6 189 1.1E-55 T 19-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 46 60 7.2E-7 T 19-04-2016 ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 76 92 7.2E-7 T 19-04-2016 ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 SUPERFAMILY SSF52317 1 189 5.77E-59 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 PRINTS PR00096 Glutamine amidotransferase superfamily signature 49 58 6.1E-14 T 19-04-2016 ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 6.1E-14 T 19-04-2016 ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 PRINTS PR00096 Glutamine amidotransferase superfamily signature 76 87 6.1E-14 T 19-04-2016 ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 8.1E-78 T 19-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 ALIDE2_RS21745 4765bef942c1fe06c185822302145692 190 PANTHER PTHR11922 3 188 3.9E-99 T 19-04-2016 ALIDE2_RS19800 b0b5fd3b7397b10070300563cbffcb1c 445 Pfam PF14065 Protein of unknown function (DUF4255) 10 212 2.1E-46 T 19-04-2016 IPR025351 Protein of unknown function DUF4255 ALIDE2_RS20655 954e609c323113be9384b847298d331e 234 PANTHER PTHR20842 1 234 5.7E-69 T 19-04-2016 ALIDE2_RS20655 954e609c323113be9384b847298d331e 234 Pfam PF03575 Peptidase family S51 3 205 3.0E-49 T 19-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 ALIDE2_RS20655 954e609c323113be9384b847298d331e 234 Gene3D G3DSA:3.40.50.880 1 227 5.9E-65 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS20655 954e609c323113be9384b847298d331e 234 SUPERFAMILY SSF52317 3 218 1.07E-37 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS00330 9cbf558182ba50e91483e880ccc4f524 421 PANTHER PTHR23505:SF8 3 387 9.2E-33 T 19-04-2016 ALIDE2_RS00330 9cbf558182ba50e91483e880ccc4f524 421 PANTHER PTHR23505:SF8 411 419 9.2E-33 T 19-04-2016 ALIDE2_RS00330 9cbf558182ba50e91483e880ccc4f524 421 Gene3D G3DSA:1.20.1250.20 16 191 4.3E-26 T 19-04-2016 ALIDE2_RS00330 9cbf558182ba50e91483e880ccc4f524 421 Gene3D G3DSA:1.20.1250.20 223 400 9.6E-14 T 19-04-2016 ALIDE2_RS00330 9cbf558182ba50e91483e880ccc4f524 421 Pfam PF07690 Major Facilitator Superfamily 23 370 1.7E-33 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS00330 9cbf558182ba50e91483e880ccc4f524 421 PANTHER PTHR23505 3 387 9.2E-33 T 19-04-2016 ALIDE2_RS00330 9cbf558182ba50e91483e880ccc4f524 421 PANTHER PTHR23505 411 419 9.2E-33 T 19-04-2016 ALIDE2_RS00330 9cbf558182ba50e91483e880ccc4f524 421 SUPERFAMILY SSF103473 8 406 3.79E-50 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS13450 e5322fcf3dd20c3c29568a5aa4177f74 113 SUPERFAMILY SSF82693 2 31 4.71E-6 T 19-04-2016 ALIDE2_RS13450 e5322fcf3dd20c3c29568a5aa4177f74 113 PANTHER PTHR32063 1 78 2.3E-35 T 19-04-2016 ALIDE2_RS13450 e5322fcf3dd20c3c29568a5aa4177f74 113 Gene3D G3DSA:3.30.2090.10 32 79 1.6E-8 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS13450 e5322fcf3dd20c3c29568a5aa4177f74 113 PANTHER PTHR32063:SF24 1 78 2.3E-35 T 19-04-2016 ALIDE2_RS13450 e5322fcf3dd20c3c29568a5aa4177f74 113 Pfam PF00873 AcrB/AcrD/AcrF family 1 80 8.0E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS13450 e5322fcf3dd20c3c29568a5aa4177f74 113 SUPERFAMILY SSF82714 33 87 1.83E-8 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS12550 274ace8c885f07b16e2772f45562c3e1 405 Gene3D G3DSA:3.40.50.10540 311 400 3.4E-102 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS12550 274ace8c885f07b16e2772f45562c3e1 405 Gene3D G3DSA:3.40.50.10540 12 223 3.4E-102 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS12550 274ace8c885f07b16e2772f45562c3e1 405 Gene3D G3DSA:3.30.1540.10 240 310 2.9E-26 T 19-04-2016 ALIDE2_RS12550 274ace8c885f07b16e2772f45562c3e1 405 Pfam PF02515 CoA-transferase family III 14 377 2.7E-107 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS12550 274ace8c885f07b16e2772f45562c3e1 405 PANTHER PTHR24023:SF593 62 388 8.4E-34 T 19-04-2016 ALIDE2_RS12550 274ace8c885f07b16e2772f45562c3e1 405 PANTHER PTHR24023:SF593 17 46 8.4E-34 T 19-04-2016 ALIDE2_RS12550 274ace8c885f07b16e2772f45562c3e1 405 PANTHER PTHR24023 62 388 8.4E-34 T 19-04-2016 ALIDE2_RS12550 274ace8c885f07b16e2772f45562c3e1 405 PANTHER PTHR24023 17 46 8.4E-34 T 19-04-2016 ALIDE2_RS12550 274ace8c885f07b16e2772f45562c3e1 405 SUPERFAMILY SSF89796 12 400 6.54E-119 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 Gene3D G3DSA:3.30.450.20 318 437 4.6E-19 T 19-04-2016 ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 SUPERFAMILY SSF55785 316 437 3.54E-17 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 Pfam PF00512 His Kinase A (phospho-acceptor) domain 579 643 5.3E-19 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 SUPERFAMILY SSF47384 565 643 1.33E-19 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 SUPERFAMILY SSF55874 633 801 5.89E-45 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 Gene3D G3DSA:3.30.450.20 442 564 9.0E-21 T 19-04-2016 ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 786 799 4.6E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 728 742 4.6E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 762 780 4.6E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 746 756 4.6E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 691 800 8.1E-26 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 PANTHER PTHR24423 318 799 1.0E-114 T 19-04-2016 ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 Gene3D G3DSA:3.30.565.10 651 804 6.5E-44 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 454 565 1.1E-17 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 323 446 1.5E-11 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 SMART SM00388 578 644 1.1E-18 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 SUPERFAMILY SSF55785 436 563 6.77E-22 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 Gene3D G3DSA:1.10.287.130 571 640 5.9E-19 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 Pfam PF08448 PAS fold 333 438 1.1E-10 T 19-04-2016 IPR013656 PAS fold-4 ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 Pfam PF08448 PAS fold 457 565 2.1E-12 T 19-04-2016 IPR013656 PAS fold-4 ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 SMART SM00387 690 802 7.9E-39 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 SMART SM00091 451 517 3.0E-6 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS20215 79231bfd4d871ea743bb9e86cd08f3f8 812 SMART SM00091 326 392 1.3E-8 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS15420 cabf805f983456c4eebb7848a6ff3ab0 267 Gene3D G3DSA:3.20.20.70 9 264 8.4E-52 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS15420 cabf805f983456c4eebb7848a6ff3ab0 267 Pfam PF05690 Thiazole biosynthesis protein ThiG 11 254 2.5E-105 T 19-04-2016 ALIDE2_RS15420 cabf805f983456c4eebb7848a6ff3ab0 267 PANTHER PTHR34266 3 265 5.3E-131 T 19-04-2016 ALIDE2_RS15420 cabf805f983456c4eebb7848a6ff3ab0 267 SUPERFAMILY SSF110399 7 245 1.7E-80 T 19-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 ALIDE2_RS15420 cabf805f983456c4eebb7848a6ff3ab0 267 Hamap MF_00443 Thiazole synthase [thiG]. 8 260 39.917 T 19-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 ALIDE2_RS16990 4ec49459aa7b062fd6a51860e56656a1 362 PANTHER PTHR21071 195 362 2.3E-131 T 19-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS16990 4ec49459aa7b062fd6a51860e56656a1 362 PANTHER PTHR21071 1 172 2.3E-131 T 19-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS16990 4ec49459aa7b062fd6a51860e56656a1 362 Pfam PF01565 FAD binding domain 24 154 6.4E-21 T 19-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ALIDE2_RS16990 4ec49459aa7b062fd6a51860e56656a1 362 Gene3D G3DSA:3.30.43.10 7 71 1.1E-18 T 19-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 ALIDE2_RS16990 4ec49459aa7b062fd6a51860e56656a1 362 Gene3D G3DSA:3.30.465.10 77 258 1.7E-52 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ALIDE2_RS16990 4ec49459aa7b062fd6a51860e56656a1 362 SUPERFAMILY SSF56194 231 362 4.19E-43 T 19-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS16990 4ec49459aa7b062fd6a51860e56656a1 362 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 358 2.8E-65 T 19-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS16990 4ec49459aa7b062fd6a51860e56656a1 362 Gene3D G3DSA:3.90.78.10 259 362 2.4E-40 T 19-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS16990 4ec49459aa7b062fd6a51860e56656a1 362 PANTHER PTHR21071:SF6 195 362 2.3E-131 T 19-04-2016 ALIDE2_RS16990 4ec49459aa7b062fd6a51860e56656a1 362 PANTHER PTHR21071:SF6 1 172 2.3E-131 T 19-04-2016 ALIDE2_RS16990 4ec49459aa7b062fd6a51860e56656a1 362 SUPERFAMILY SSF56176 9 218 4.67E-39 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS16990 4ec49459aa7b062fd6a51860e56656a1 362 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 362 80.046 T 19-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS16990 4ec49459aa7b062fd6a51860e56656a1 362 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 235 362 4.5E-31 T 19-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS11145 599fe75acb2d24f8621578a592168af7 456 SUPERFAMILY SSF53474 300 410 1.07E-8 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS11145 599fe75acb2d24f8621578a592168af7 456 SUPERFAMILY SSF53474 63 204 1.07E-8 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS11145 599fe75acb2d24f8621578a592168af7 456 Gene3D G3DSA:3.40.50.1820 64 190 1.7E-4 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 PANTHER PTHR11451:SF3 408 579 7.4E-147 T 19-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 PANTHER PTHR11451:SF3 4 244 7.4E-147 T 19-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.5E-17 T 19-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.5E-17 T 19-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.5E-17 T 19-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.5E-17 T 19-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 Pfam PF03129 Anticodon binding domain 485 577 6.1E-18 T 19-04-2016 IPR004154 Anticodon-binding ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 SUPERFAMILY SSF52954 473 579 3.27E-31 T 19-04-2016 IPR004154 Anticodon-binding ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 468 4.8E-43 T 19-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 Gene3D G3DSA:3.30.930.10 401 477 1.1E-101 T 19-04-2016 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 Gene3D G3DSA:3.30.930.10 5 204 1.1E-101 T 19-04-2016 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 575 6.0E-221 T 19-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 PIRSF PIRSF001535 1 581 1.1E-261 T 19-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 Gene3D G3DSA:3.90.960.10 253 397 5.3E-30 T 19-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 580 40.283 T 19-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 Pfam PF04073 Aminoacyl-tRNA editing domain 257 387 2.9E-27 T 19-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 Gene3D G3DSA:3.40.50.800 479 579 5.4E-30 T 19-04-2016 IPR004154 Anticodon-binding ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 SUPERFAMILY SSF55826 218 398 4.32E-32 T 19-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 PANTHER PTHR11451 408 579 7.4E-147 T 19-04-2016 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 PANTHER PTHR11451 4 244 7.4E-147 T 19-04-2016 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 SUPERFAMILY SSF55681 10 237 5.94E-97 T 19-04-2016 ALIDE2_RS04460 12c88a17e39e156d92962780dadae553 581 SUPERFAMILY SSF55681 416 487 5.94E-97 T 19-04-2016 ALIDE2_RS05790 2911acf582768ecfbb794efa64b6e3b7 717 SMART SM00881 18 114 3.6E-24 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS05790 2911acf582768ecfbb794efa64b6e3b7 717 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 172 306 3.0E-42 T 19-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain ALIDE2_RS05790 2911acf582768ecfbb794efa64b6e3b7 717 Pfam PF13549 ATP-grasp domain 497 712 2.3E-68 T 19-04-2016 ALIDE2_RS05790 2911acf582768ecfbb794efa64b6e3b7 717 PANTHER PTHR33303:SF3 478 715 7.5E-170 T 19-04-2016 ALIDE2_RS05790 2911acf582768ecfbb794efa64b6e3b7 717 PANTHER PTHR33303:SF3 13 451 7.5E-170 T 19-04-2016 ALIDE2_RS05790 2911acf582768ecfbb794efa64b6e3b7 717 PANTHER PTHR33303 478 715 7.5E-170 T 19-04-2016 ALIDE2_RS05790 2911acf582768ecfbb794efa64b6e3b7 717 PANTHER PTHR33303 13 451 7.5E-170 T 19-04-2016 ALIDE2_RS05790 2911acf582768ecfbb794efa64b6e3b7 717 Gene3D G3DSA:3.40.50.261 146 303 5.1E-25 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS05790 2911acf582768ecfbb794efa64b6e3b7 717 SUPERFAMILY SSF56059 502 712 1.2E-39 T 19-04-2016 ALIDE2_RS05790 2911acf582768ecfbb794efa64b6e3b7 717 SUPERFAMILY SSF52210 313 470 6.41E-23 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS05790 2911acf582768ecfbb794efa64b6e3b7 717 SUPERFAMILY SSF51735 15 154 4.78E-33 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS05790 2911acf582768ecfbb794efa64b6e3b7 717 SUPERFAMILY SSF52210 147 306 3.92E-33 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS05790 2911acf582768ecfbb794efa64b6e3b7 717 Gene3D G3DSA:3.40.50.720 13 145 2.1E-34 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS05790 2911acf582768ecfbb794efa64b6e3b7 717 Pfam PF13380 CoA binding domain 22 149 2.0E-23 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS05790 2911acf582768ecfbb794efa64b6e3b7 717 Gene3D G3DSA:3.30.470.20 508 609 4.8E-8 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 PANTHER PTHR24322 155 187 2.7E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 PANTHER PTHR24322 10 139 2.7E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.0E-27 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.0E-27 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.0E-27 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.0E-27 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.0E-27 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 0.006 T 19-04-2016 ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 9.9E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 9.9E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 9.9E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 PANTHER PTHR24322:SF631 155 187 2.7E-42 T 19-04-2016 ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 PANTHER PTHR24322:SF631 10 139 2.7E-42 T 19-04-2016 ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 Pfam PF00106 short chain dehydrogenase 8 197 5.5E-43 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 Gene3D G3DSA:3.40.50.720 7 251 3.6E-58 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 SUPERFAMILY SSF51735 7 250 1.41E-60 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS23410 d45a308cfd1d01a92aa3944fd15ae065 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 ProSitePatterns PS01244 Aconitase family signature 2. 546 559 - T 19-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 Gene3D G3DSA:3.30.499.10 373 397 3.5E-62 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 Gene3D G3DSA:3.30.499.10 472 628 3.5E-62 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 Gene3D G3DSA:3.40.1060.10 253 371 5.1E-35 T 19-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 Pfam PF00330 Aconitase family (aconitate hydratase) 75 615 1.0E-174 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 Gene3D G3DSA:3.30.499.10 34 252 2.5E-76 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 ProSitePatterns PS00450 Aconitase family signature 1. 480 496 - T 19-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PRINTS PR00415 Aconitase family signature 176 184 1.1E-40 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PRINTS PR00415 Aconitase family signature 484 495 1.1E-40 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PRINTS PR00415 Aconitase family signature 376 390 1.1E-40 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PRINTS PR00415 Aconitase family signature 282 295 1.1E-40 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PRINTS PR00415 Aconitase family signature 296 309 1.1E-40 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PRINTS PR00415 Aconitase family signature 152 165 1.1E-40 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PRINTS PR00415 Aconitase family signature 206 219 1.1E-40 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PRINTS PR00415 Aconitase family signature 546 559 1.1E-40 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PRINTS PR00415 Aconitase family signature 220 235 1.1E-40 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 Pfam PF00694 Aconitase C-terminal domain 761 894 1.3E-37 T 19-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 SUPERFAMILY SSF52016 689 967 4.51E-74 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 Gene3D G3DSA:3.20.19.10 691 967 2.8E-73 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 SUPERFAMILY SSF53732 21 410 1.7E-210 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 SUPERFAMILY SSF53732 454 669 1.7E-210 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PANTHER PTHR11670:SF1 469 704 0.0 T 19-04-2016 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PANTHER PTHR11670:SF1 1 397 0.0 T 19-04-2016 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PANTHER PTHR11670:SF1 827 968 0.0 T 19-04-2016 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PANTHER PTHR11670:SF1 733 778 0.0 T 19-04-2016 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PANTHER PTHR11670 469 704 0.0 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PANTHER PTHR11670 1 397 0.0 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PANTHER PTHR11670 827 968 0.0 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06865 0356ac4f92ffe07ec2fc43ebf2388f79 968 PANTHER PTHR11670 733 778 0.0 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS00610 c8cc42c3188a8a705f79971f4448a4da 220 SUPERFAMILY SSF50814 21 198 1.9E-24 T 19-04-2016 IPR011038 Calycin-like ALIDE2_RS00610 c8cc42c3188a8a705f79971f4448a4da 220 PIRSF PIRSF036226 1 201 1.1E-61 T 19-04-2016 IPR014602 Uncharacterised conserved protein UCP036226 ALIDE2_RS00610 c8cc42c3188a8a705f79971f4448a4da 220 Pfam PF08768 Domain of unknown function (DUF1794) 21 197 2.5E-20 T 19-04-2016 IPR014878 Domain of unknown function DUF1794 ALIDE2_RS13520 ecb6056db0564efb0780e007a29cb74c 347 SUPERFAMILY SSF55347 141 306 7.61E-38 T 19-04-2016 ALIDE2_RS13520 ecb6056db0564efb0780e007a29cb74c 347 Gene3D G3DSA:3.30.360.10 141 304 1.3E-24 T 19-04-2016 ALIDE2_RS13520 ecb6056db0564efb0780e007a29cb74c 347 PIRSF PIRSF000149 2 322 9.7E-45 T 19-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 ALIDE2_RS13520 ecb6056db0564efb0780e007a29cb74c 347 TIGRFAM TIGR01546 GAPDH-II_archae: glyceraldehyde-3-phosphate dehydrogenase, type II 6 338 1.0E-93 T 19-04-2016 IPR006436 Glyceraldehyde-3-phosphate dehydrogenase, type II GO:0005737|GO:0006096|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.59|KEGG: 00710+1.2.1.59|UniPathway: UPA00109 ALIDE2_RS13520 ecb6056db0564efb0780e007a29cb74c 347 Gene3D G3DSA:3.40.50.720 1 108 5.9E-11 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS13520 ecb6056db0564efb0780e007a29cb74c 347 SUPERFAMILY SSF51735 4 155 2.32E-36 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS13520 ecb6056db0564efb0780e007a29cb74c 347 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 192 287 1.6E-7 T 19-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 ALIDE2_RS13520 ecb6056db0564efb0780e007a29cb74c 347 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 142 1.3E-8 T 19-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 ALIDE2_RS13520 ecb6056db0564efb0780e007a29cb74c 347 Hamap MF_00559 Glyceraldehyde-3-phosphate dehydrogenase [gap]. 1 347 149.305 T 19-04-2016 IPR006436 Glyceraldehyde-3-phosphate dehydrogenase, type II GO:0005737|GO:0006096|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.59|KEGG: 00710+1.2.1.59|UniPathway: UPA00109 ALIDE2_RS13520 ecb6056db0564efb0780e007a29cb74c 347 SMART SM00846 4 142 3.5E-6 T 19-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 ALIDE2_RS08425 1c2e77df9a7581ebe6651adf9701af28 327 Gene3D G3DSA:3.40.190.10 129 232 1.1E-5 T 19-04-2016 ALIDE2_RS08425 1c2e77df9a7581ebe6651adf9701af28 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 323 2.5E-83 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS08425 1c2e77df9a7581ebe6651adf9701af28 327 PANTHER PTHR30349 4 288 9.3E-92 T 19-04-2016 ALIDE2_RS08425 1c2e77df9a7581ebe6651adf9701af28 327 SUPERFAMILY SSF53850 101 288 1.09E-15 T 19-04-2016 ALIDE2_RS08425 1c2e77df9a7581ebe6651adf9701af28 327 PIRSF PIRSF017082 1 326 3.4E-94 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS08425 1c2e77df9a7581ebe6651adf9701af28 327 PANTHER PTHR30349:SF16 4 288 9.3E-92 T 19-04-2016 ALIDE2_RS14175 cedd0fb3c9e2ce8a59539e8bdf2d9b2d 148 SUPERFAMILY SSF55961 1 144 6.11E-43 T 19-04-2016 ALIDE2_RS14175 cedd0fb3c9e2ce8a59539e8bdf2d9b2d 148 PANTHER PTHR36929 1 143 1.8E-24 T 19-04-2016 ALIDE2_RS14175 cedd0fb3c9e2ce8a59539e8bdf2d9b2d 148 Gene3D G3DSA:3.30.530.20 2 144 1.6E-40 T 19-04-2016 IPR023393 START-like domain ALIDE2_RS14175 cedd0fb3c9e2ce8a59539e8bdf2d9b2d 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 143 9.1E-28 T 19-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 ALIDE2_RS14175 cedd0fb3c9e2ce8a59539e8bdf2d9b2d 148 PANTHER PTHR36929:SF1 1 143 1.8E-24 T 19-04-2016 ALIDE2_RS01325 f6d0ed4752415fbcda226d3b61b439a9 251 SMART SM00895 93 219 6.8E-10 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS01325 f6d0ed4752415fbcda226d3b61b439a9 251 Pfam PF07729 FCD domain 93 218 4.9E-18 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS01325 f6d0ed4752415fbcda226d3b61b439a9 251 SMART SM00345 25 83 1.3E-15 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS01325 f6d0ed4752415fbcda226d3b61b439a9 251 Gene3D G3DSA:1.20.120.530 86 230 6.5E-29 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS01325 f6d0ed4752415fbcda226d3b61b439a9 251 SUPERFAMILY SSF48008 89 228 6.28E-19 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS01325 f6d0ed4752415fbcda226d3b61b439a9 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 83 9.5E-20 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS01325 f6d0ed4752415fbcda226d3b61b439a9 251 PANTHER PTHR11751 22 109 3.3E-17 T 19-04-2016 ALIDE2_RS01325 f6d0ed4752415fbcda226d3b61b439a9 251 Gene3D G3DSA:1.10.10.10 13 85 1.9E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01325 f6d0ed4752415fbcda226d3b61b439a9 251 SUPERFAMILY SSF46785 16 87 1.34E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01325 f6d0ed4752415fbcda226d3b61b439a9 251 PANTHER PTHR11751:SF283 22 109 3.3E-17 T 19-04-2016 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 PRINTS PR00834 HtrA/DegQ protease family signature 133 153 3.2E-48 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 PRINTS PR00834 HtrA/DegQ protease family signature 329 341 3.2E-48 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 PRINTS PR00834 HtrA/DegQ protease family signature 235 252 3.2E-48 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 PRINTS PR00834 HtrA/DegQ protease family signature 175 199 3.2E-48 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 PRINTS PR00834 HtrA/DegQ protease family signature 112 124 3.2E-48 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 PRINTS PR00834 HtrA/DegQ protease family signature 213 230 3.2E-48 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 PANTHER PTHR22939 47 382 9.5E-112 T 19-04-2016 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 PANTHER PTHR22939:SF81 47 382 9.5E-112 T 19-04-2016 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 Gene3D G3DSA:2.40.10.10 60 168 1.6E-29 T 19-04-2016 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 SMART SM00228 281 371 2.9E-8 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 SUPERFAMILY SSF50156 239 372 2.23E-17 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 Gene3D G3DSA:2.40.10.10 169 285 9.5E-47 T 19-04-2016 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 Gene3D G3DSA:2.30.42.10 299 379 2.3E-19 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 Pfam PF13365 Trypsin-like peptidase domain 103 242 2.8E-34 T 19-04-2016 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 Pfam PF13180 PDZ domain 281 380 2.5E-13 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS10255 680a177b50d5abca6f614313621ff297 384 SUPERFAMILY SSF50494 68 277 1.17E-61 T 19-04-2016 IPR009003 Peptidase S1, PA clan ALIDE2_RS14125 f622fb71f58e06968417a41ca99be560 477 Pfam PF07690 Major Facilitator Superfamily 28 411 2.7E-28 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS14125 f622fb71f58e06968417a41ca99be560 477 Gene3D G3DSA:1.20.1250.20 265 474 1.3E-13 T 19-04-2016 ALIDE2_RS14125 f622fb71f58e06968417a41ca99be560 477 SUPERFAMILY SSF103473 255 470 7.19E-43 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS14125 f622fb71f58e06968417a41ca99be560 477 SUPERFAMILY SSF103473 6 199 7.19E-43 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS14125 f622fb71f58e06968417a41ca99be560 477 Gene3D G3DSA:1.20.1250.20 19 197 5.5E-17 T 19-04-2016 ALIDE2_RS14125 f622fb71f58e06968417a41ca99be560 477 PANTHER PTHR23501 2 472 2.1E-46 T 19-04-2016 ALIDE2_RS18445 5c667dde8639e4631acf3bd97e262d0d 340 SUPERFAMILY SSF47413 6 63 7.31E-16 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS18445 5c667dde8639e4631acf3bd97e262d0d 340 Gene3D G3DSA:3.40.50.2300 175 310 1.2E-41 T 19-04-2016 ALIDE2_RS18445 5c667dde8639e4631acf3bd97e262d0d 340 SMART SM00354 5 75 2.4E-28 T 19-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 ALIDE2_RS18445 5c667dde8639e4631acf3bd97e262d0d 340 PANTHER PTHR30146 5 309 1.7E-92 T 19-04-2016 ALIDE2_RS18445 5c667dde8639e4631acf3bd97e262d0d 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 3.6E-16 T 19-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 ALIDE2_RS18445 5c667dde8639e4631acf3bd97e262d0d 340 SUPERFAMILY SSF53822 62 314 1.59E-61 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS18445 5c667dde8639e4631acf3bd97e262d0d 340 Gene3D G3DSA:3.40.50.2300 58 174 2.4E-39 T 19-04-2016 ALIDE2_RS18445 5c667dde8639e4631acf3bd97e262d0d 340 Gene3D G3DSA:1.10.260.40 7 57 1.4E-22 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS18445 5c667dde8639e4631acf3bd97e262d0d 340 Pfam PF13377 Periplasmic binding protein-like domain 171 332 1.6E-30 T 19-04-2016 ALIDE2_RS21165 55e31903050371f337ba899925dc12b9 284 Pfam PF00005 ABC transporter 32 194 1.2E-29 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS21165 55e31903050371f337ba899925dc12b9 284 PANTHER PTHR24220:SF519 18 123 2.6E-123 T 19-04-2016 ALIDE2_RS21165 55e31903050371f337ba899925dc12b9 284 PANTHER PTHR24220:SF519 140 265 2.6E-123 T 19-04-2016 ALIDE2_RS21165 55e31903050371f337ba899925dc12b9 284 SMART SM00382 41 242 2.4E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS21165 55e31903050371f337ba899925dc12b9 284 SUPERFAMILY SSF52540 15 264 6.47E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21165 55e31903050371f337ba899925dc12b9 284 PANTHER PTHR24220 18 123 2.6E-123 T 19-04-2016 ALIDE2_RS21165 55e31903050371f337ba899925dc12b9 284 PANTHER PTHR24220 140 265 2.6E-123 T 19-04-2016 ALIDE2_RS21165 55e31903050371f337ba899925dc12b9 284 Gene3D G3DSA:3.40.50.300 14 264 2.0E-68 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21165 55e31903050371f337ba899925dc12b9 284 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 243 265 9.6E-6 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALIDE2_RS13785 689c4980801df661906ba247e17daad1 597 SMART SM00470 10 102 1.7E-19 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS13785 689c4980801df661906ba247e17daad1 597 Pfam PF02195 ParB-like nuclease domain 13 101 1.0E-18 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS13785 689c4980801df661906ba247e17daad1 597 SUPERFAMILY SSF110849 12 104 9.42E-22 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS13785 689c4980801df661906ba247e17daad1 597 SUPERFAMILY SSF109709 95 198 1.96E-20 T 19-04-2016 ALIDE2_RS13785 689c4980801df661906ba247e17daad1 597 PANTHER PTHR33375 11 194 1.8E-45 T 19-04-2016 ALIDE2_RS13785 689c4980801df661906ba247e17daad1 597 TIGRFAM TIGR03734 PRTRC_parB: PRTRC system ParB family protein 17 558 4.9E-225 T 19-04-2016 IPR022396 ParB-related, ThiF-related cassette, ParB ALIDE2_RS13785 689c4980801df661906ba247e17daad1 597 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 22 176 3.4E-33 T 19-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 ALIDE2_RS13785 689c4980801df661906ba247e17daad1 597 Gene3D G3DSA:3.90.1530.10 11 107 9.3E-29 T 19-04-2016 ALIDE2_RS06855 845762873e03336b7ba6ffc00b2b13e4 281 PANTHER PTHR24032 1 259 5.6E-97 T 19-04-2016 ALIDE2_RS06855 845762873e03336b7ba6ffc00b2b13e4 281 PIRSF PIRSF000903 1 279 3.6E-99 T 19-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 ALIDE2_RS06855 845762873e03336b7ba6ffc00b2b13e4 281 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 272 44.234 T 19-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 ALIDE2_RS06855 845762873e03336b7ba6ffc00b2b13e4 281 PANTHER PTHR24032:SF27 1 259 5.6E-97 T 19-04-2016 ALIDE2_RS06855 845762873e03336b7ba6ffc00b2b13e4 281 Gene3D G3DSA:3.60.21.10 1 134 1.3E-48 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS06855 845762873e03336b7ba6ffc00b2b13e4 281 Gene3D G3DSA:3.60.21.10 171 274 1.3E-48 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS06855 845762873e03336b7ba6ffc00b2b13e4 281 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 259 3.4E-80 T 19-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 ALIDE2_RS06855 845762873e03336b7ba6ffc00b2b13e4 281 Pfam PF00149 Calcineurin-like phosphoesterase 3 129 4.9E-12 T 19-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 ALIDE2_RS06855 845762873e03336b7ba6ffc00b2b13e4 281 SUPERFAMILY SSF56300 1 256 3.14E-50 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS00260 fd03f54c56f292e5d2fc86da6b05d1c4 371 PANTHER PTHR22893:SF14 1 369 6.8E-161 T 19-04-2016 ALIDE2_RS00260 fd03f54c56f292e5d2fc86da6b05d1c4 371 SUPERFAMILY SSF51395 1 369 6.48E-120 T 19-04-2016 ALIDE2_RS00260 fd03f54c56f292e5d2fc86da6b05d1c4 371 Gene3D G3DSA:3.20.20.70 1 369 1.0E-125 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS00260 fd03f54c56f292e5d2fc86da6b05d1c4 371 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 348 5.0E-82 T 19-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ALIDE2_RS00260 fd03f54c56f292e5d2fc86da6b05d1c4 371 PANTHER PTHR22893 1 369 6.8E-161 T 19-04-2016 ALIDE2_RS22840 cef53433349adb547049f1a809f05b4b 386 SUPERFAMILY SSF52210 239 385 1.83E-54 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS22840 cef53433349adb547049f1a809f05b4b 386 Gene3D G3DSA:3.30.470.20 96 239 1.2E-56 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS22840 cef53433349adb547049f1a809f05b4b 386 Pfam PF00549 CoA-ligase 262 381 9.9E-27 T 19-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS22840 cef53433349adb547049f1a809f05b4b 386 Pfam PF08442 ATP-grasp domain 2 201 5.3E-79 T 19-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS22840 cef53433349adb547049f1a809f05b4b 386 Gene3D G3DSA:3.30.1490.20 22 95 3.4E-35 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS22840 cef53433349adb547049f1a809f05b4b 386 PIRSF PIRSF001554 1 386 6.9E-153 T 19-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 ALIDE2_RS22840 cef53433349adb547049f1a809f05b4b 386 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.388 T 19-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 ALIDE2_RS22840 cef53433349adb547049f1a809f05b4b 386 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 19-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS22840 cef53433349adb547049f1a809f05b4b 386 PANTHER PTHR11815 1 386 1.5E-229 T 19-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 ALIDE2_RS22840 cef53433349adb547049f1a809f05b4b 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.1E-158 T 19-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 ALIDE2_RS22840 cef53433349adb547049f1a809f05b4b 386 PANTHER PTHR11815:SF1 1 386 1.5E-229 T 19-04-2016 ALIDE2_RS22840 cef53433349adb547049f1a809f05b4b 386 Gene3D G3DSA:3.40.50.261 241 383 1.0E-65 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS22840 cef53433349adb547049f1a809f05b4b 386 SUPERFAMILY SSF56059 1 238 5.3E-83 T 19-04-2016 ALIDE2_RS14030 08f106684de10a692fa560ef9fb4bde5 117 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 20 116 27.832 T 19-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 ALIDE2_RS14030 08f106684de10a692fa560ef9fb4bde5 117 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 21 114 7.8E-36 T 19-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 ALIDE2_RS14030 08f106684de10a692fa560ef9fb4bde5 117 SUPERFAMILY SSF47729 22 112 9.13E-31 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ALIDE2_RS14030 08f106684de10a692fa560ef9fb4bde5 117 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 67 86 - T 19-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 ALIDE2_RS14030 08f106684de10a692fa560ef9fb4bde5 117 PRINTS PR01727 Prokaryotic integration host factor signature 79 92 2.6E-13 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS14030 08f106684de10a692fa560ef9fb4bde5 117 PRINTS PR01727 Prokaryotic integration host factor signature 95 109 2.6E-13 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS14030 08f106684de10a692fa560ef9fb4bde5 117 PRINTS PR01727 Prokaryotic integration host factor signature 61 76 2.6E-13 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS14030 08f106684de10a692fa560ef9fb4bde5 117 PANTHER PTHR33175:SF2 21 116 5.5E-41 T 19-04-2016 ALIDE2_RS14030 08f106684de10a692fa560ef9fb4bde5 117 PANTHER PTHR33175 21 116 5.5E-41 T 19-04-2016 ALIDE2_RS14030 08f106684de10a692fa560ef9fb4bde5 117 Pfam PF00216 Bacterial DNA-binding protein 22 110 2.2E-29 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS14030 08f106684de10a692fa560ef9fb4bde5 117 SMART SM00411 22 111 1.1E-37 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS14030 08f106684de10a692fa560ef9fb4bde5 117 Gene3D G3DSA:4.10.520.10 21 112 1.7E-33 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ALIDE2_RS13375 213a2008062600a16efac251ad7f941c 473 Gene3D G3DSA:1.10.443.10 256 442 1.7E-25 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS13375 213a2008062600a16efac251ad7f941c 473 Pfam PF00589 Phage integrase family 258 434 4.7E-18 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS13375 213a2008062600a16efac251ad7f941c 473 PANTHER PTHR30629 385 467 9.5E-51 T 19-04-2016 ALIDE2_RS13375 213a2008062600a16efac251ad7f941c 473 PANTHER PTHR30629 53 369 9.5E-51 T 19-04-2016 ALIDE2_RS13375 213a2008062600a16efac251ad7f941c 473 Gene3D G3DSA:1.10.150.130 157 231 2.2E-12 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS13375 213a2008062600a16efac251ad7f941c 473 SUPERFAMILY SSF56349 158 445 2.09E-44 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS11310 ed486a836992554b47b0df84f75056ae 319 PANTHER PTHR11089 3 283 3.5E-65 T 19-04-2016 ALIDE2_RS11310 ed486a836992554b47b0df84f75056ae 319 Pfam PF01926 50S ribosome-binding GTPase 116 181 1.8E-15 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS11310 ed486a836992554b47b0df84f75056ae 319 Gene3D G3DSA:3.40.50.300 19 170 5.8E-28 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11310 ed486a836992554b47b0df84f75056ae 319 Gene3D G3DSA:1.10.1580.10 177 270 3.1E-25 T 19-04-2016 IPR023179 GTP-binding protein, orthogonal bundle domain ALIDE2_RS11310 ed486a836992554b47b0df84f75056ae 319 SUPERFAMILY SSF52540 10 185 1.21E-36 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11310 ed486a836992554b47b0df84f75056ae 319 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 277 3.0E-91 T 19-04-2016 IPR019991 GTP-binding protein, ribosome biogenesis ALIDE2_RS11310 ed486a836992554b47b0df84f75056ae 319 PIRSF PIRSF006230 1 282 1.3E-89 T 19-04-2016 IPR016478 GTPase, MTG1 ALIDE2_RS07135 a7aa23d19d005aa37bdb6152994f4cc2 267 Pfam PF01522 Polysaccharide deacetylase 33 180 1.1E-19 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ALIDE2_RS07135 a7aa23d19d005aa37bdb6152994f4cc2 267 Gene3D G3DSA:3.20.20.370 31 255 4.3E-41 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ALIDE2_RS07135 a7aa23d19d005aa37bdb6152994f4cc2 267 SUPERFAMILY SSF88713 31 256 3.89E-42 T 19-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ALIDE2_RS07135 a7aa23d19d005aa37bdb6152994f4cc2 267 PANTHER PTHR10587 34 104 1.3E-16 T 19-04-2016 ALIDE2_RS07135 a7aa23d19d005aa37bdb6152994f4cc2 267 PANTHER PTHR10587 123 256 1.3E-16 T 19-04-2016 ALIDE2_RS00630 db0eb37551ff2d6d2b648c2a6273ed10 330 PANTHER PTHR30349:SF16 9 322 2.9E-91 T 19-04-2016 ALIDE2_RS00630 db0eb37551ff2d6d2b648c2a6273ed10 330 PANTHER PTHR30349 9 322 2.9E-91 T 19-04-2016 ALIDE2_RS00630 db0eb37551ff2d6d2b648c2a6273ed10 330 SUPERFAMILY SSF53850 117 289 6.72E-11 T 19-04-2016 ALIDE2_RS00630 db0eb37551ff2d6d2b648c2a6273ed10 330 PIRSF PIRSF017082 4 329 4.4E-78 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00630 db0eb37551ff2d6d2b648c2a6273ed10 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 325 7.2E-88 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS14800 30f63e31a33e40cf015894c8892b401e 186 PANTHER PTHR38011 2 186 6.0E-61 T 19-04-2016 ALIDE2_RS14800 30f63e31a33e40cf015894c8892b401e 186 Pfam PF01872 RibD C-terminal domain 4 175 3.3E-15 T 19-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ALIDE2_RS14800 30f63e31a33e40cf015894c8892b401e 186 PANTHER PTHR38011:SF2 2 186 6.0E-61 T 19-04-2016 ALIDE2_RS14800 30f63e31a33e40cf015894c8892b401e 186 Gene3D G3DSA:3.40.430.10 5 184 4.5E-20 T 19-04-2016 IPR024072 Dihydrofolate reductase-like domain ALIDE2_RS14800 30f63e31a33e40cf015894c8892b401e 186 SUPERFAMILY SSF53597 3 183 8.25E-24 T 19-04-2016 IPR024072 Dihydrofolate reductase-like domain ALIDE2_RS01280 0484d928d1bfd821264be24245014869 367 Gene3D G3DSA:3.40.50.10540 2 202 5.5E-94 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS01280 0484d928d1bfd821264be24245014869 367 Gene3D G3DSA:3.40.50.10540 293 367 5.5E-94 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS01280 0484d928d1bfd821264be24245014869 367 Gene3D G3DSA:3.30.1540.10 208 292 2.4E-26 T 19-04-2016 ALIDE2_RS01280 0484d928d1bfd821264be24245014869 367 SUPERFAMILY SSF89796 2 367 3.66E-119 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS01280 0484d928d1bfd821264be24245014869 367 Pfam PF02515 CoA-transferase family III 2 358 1.7E-112 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS01280 0484d928d1bfd821264be24245014869 367 PANTHER PTHR24023:SF593 29 317 2.9E-31 T 19-04-2016 ALIDE2_RS01280 0484d928d1bfd821264be24245014869 367 PANTHER PTHR24023 29 317 2.9E-31 T 19-04-2016 ALIDE2_RS11660 6ec81957596e85b3b396f106bc0b4801 308 PRINTS PR00073 Coprogen oxidase signature 131 153 1.8E-65 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS11660 6ec81957596e85b3b396f106bc0b4801 308 PRINTS PR00073 Coprogen oxidase signature 101 125 1.8E-65 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS11660 6ec81957596e85b3b396f106bc0b4801 308 PRINTS PR00073 Coprogen oxidase signature 38 54 1.8E-65 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS11660 6ec81957596e85b3b396f106bc0b4801 308 PRINTS PR00073 Coprogen oxidase signature 168 197 1.8E-65 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS11660 6ec81957596e85b3b396f106bc0b4801 308 PRINTS PR00073 Coprogen oxidase signature 240 267 1.8E-65 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS11660 6ec81957596e85b3b396f106bc0b4801 308 PRINTS PR00073 Coprogen oxidase signature 268 294 1.8E-65 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS11660 6ec81957596e85b3b396f106bc0b4801 308 PIRSF PIRSF000166 2 308 1.2E-116 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS11660 6ec81957596e85b3b396f106bc0b4801 308 PANTHER PTHR10755 6 308 2.6E-160 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS11660 6ec81957596e85b3b396f106bc0b4801 308 Pfam PF01218 Coproporphyrinogen III oxidase 14 308 1.5E-123 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS11660 6ec81957596e85b3b396f106bc0b4801 308 Gene3D G3DSA:3.40.1500.10 9 308 4.5E-126 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS11660 6ec81957596e85b3b396f106bc0b4801 308 SUPERFAMILY SSF102886 7 308 8.63E-129 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS11660 6ec81957596e85b3b396f106bc0b4801 308 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 172 196 - T 19-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS11660 6ec81957596e85b3b396f106bc0b4801 308 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 8 283 53.943 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS15580 9ebdd2d91910f3f1e8e30dd84324068a 585 PANTHER PTHR32089:SF63 193 515 9.7E-151 T 19-04-2016 ALIDE2_RS15580 9ebdd2d91910f3f1e8e30dd84324068a 585 SUPERFAMILY SSF58104 232 513 2.35E-72 T 19-04-2016 ALIDE2_RS15580 9ebdd2d91910f3f1e8e30dd84324068a 585 SMART SM00283 265 512 1.1E-89 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS15580 9ebdd2d91910f3f1e8e30dd84324068a 585 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 1.4E-61 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS15580 9ebdd2d91910f3f1e8e30dd84324068a 585 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 1.4E-61 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS15580 9ebdd2d91910f3f1e8e30dd84324068a 585 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 1.4E-61 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS15580 9ebdd2d91910f3f1e8e30dd84324068a 585 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 1.4E-61 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS15580 9ebdd2d91910f3f1e8e30dd84324068a 585 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 1.4E-61 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS15580 9ebdd2d91910f3f1e8e30dd84324068a 585 Pfam PF00672 HAMP domain 193 260 1.6E-16 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS15580 9ebdd2d91910f3f1e8e30dd84324068a 585 Gene3D G3DSA:1.10.287.950 279 484 6.2E-61 T 19-04-2016 ALIDE2_RS15580 9ebdd2d91910f3f1e8e30dd84324068a 585 PANTHER PTHR32089 193 515 9.7E-151 T 19-04-2016 ALIDE2_RS15580 9ebdd2d91910f3f1e8e30dd84324068a 585 SMART SM00304 212 264 2.1E-11 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS15580 9ebdd2d91910f3f1e8e30dd84324068a 585 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 511 1.6E-60 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS15580 9ebdd2d91910f3f1e8e30dd84324068a 585 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 185 3.6E-19 T 19-04-2016 IPR024478 4HB MCP domain ALIDE2_RS21585 d11aabef16c6a9d2870727c2300a22a9 134 Gene3D G3DSA:3.30.420.80 11 134 6.5E-52 T 19-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21585 d11aabef16c6a9d2870727c2300a22a9 134 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 134 32.098 T 19-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21585 d11aabef16c6a9d2870727c2300a22a9 134 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 15 131 1.4E-54 T 19-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21585 d11aabef16c6a9d2870727c2300a22a9 134 SUPERFAMILY SSF53137 19 134 9.81E-46 T 19-04-2016 ALIDE2_RS21585 d11aabef16c6a9d2870727c2300a22a9 134 Pfam PF00411 Ribosomal protein S11 24 133 7.7E-49 T 19-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21585 d11aabef16c6a9d2870727c2300a22a9 134 PANTHER PTHR11759 16 134 2.7E-66 T 19-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21585 d11aabef16c6a9d2870727c2300a22a9 134 ProSitePatterns PS00054 Ribosomal protein S11 signature. 102 124 - T 19-04-2016 IPR018102 Ribosomal S11, conserved site ALIDE2_RS21585 d11aabef16c6a9d2870727c2300a22a9 134 PIRSF PIRSF002131 2 134 2.3E-52 T 19-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS07930 1e9aa76f74a4fbac04087c61436c41db 332 Gene3D G3DSA:2.40.50.100 43 76 7.9E-13 T 19-04-2016 ALIDE2_RS07930 1e9aa76f74a4fbac04087c61436c41db 332 Gene3D G3DSA:2.40.50.100 206 239 7.9E-13 T 19-04-2016 ALIDE2_RS07930 1e9aa76f74a4fbac04087c61436c41db 332 SUPERFAMILY SSF111369 41 131 4.58E-8 T 19-04-2016 ALIDE2_RS07930 1e9aa76f74a4fbac04087c61436c41db 332 PANTHER PTHR32347 33 325 3.1E-61 T 19-04-2016 ALIDE2_RS07930 1e9aa76f74a4fbac04087c61436c41db 332 SUPERFAMILY SSF111369 148 287 1.31E-5 T 19-04-2016 ALIDE2_RS07930 1e9aa76f74a4fbac04087c61436c41db 332 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 318 1.6E-14 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS07930 1e9aa76f74a4fbac04087c61436c41db 332 PANTHER PTHR32347:SF12 33 325 3.1E-61 T 19-04-2016 ALIDE2_RS16190 63ea9459b5397ec19307c1ed646a7771 163 PANTHER PTHR34584 15 163 3.9E-23 T 19-04-2016 ALIDE2_RS16190 63ea9459b5397ec19307c1ed646a7771 163 Pfam PF01899 Na+/H+ ion antiporter subunit 13 161 9.6E-35 T 19-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 ALIDE2_RS16190 63ea9459b5397ec19307c1ed646a7771 163 PIRSF PIRSF019239 2 163 7.3E-34 T 19-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 ALIDE2_RS16190 63ea9459b5397ec19307c1ed646a7771 163 PANTHER PTHR34584:SF1 15 163 3.9E-23 T 19-04-2016 ALIDE2_RS03505 9070626010545f90f228ffb6f3396f9a 320 Gene3D G3DSA:3.20.20.370 49 110 7.9E-25 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ALIDE2_RS03505 9070626010545f90f228ffb6f3396f9a 320 Gene3D G3DSA:3.20.20.370 189 273 7.9E-25 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ALIDE2_RS03505 9070626010545f90f228ffb6f3396f9a 320 SUPERFAMILY SSF88713 189 292 1.65E-31 T 19-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ALIDE2_RS03505 9070626010545f90f228ffb6f3396f9a 320 SUPERFAMILY SSF88713 36 110 1.65E-31 T 19-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ALIDE2_RS03505 9070626010545f90f228ffb6f3396f9a 320 Pfam PF01522 Polysaccharide deacetylase 67 269 4.2E-23 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ALIDE2_RS03505 9070626010545f90f228ffb6f3396f9a 320 PANTHER PTHR34216 184 290 1.3E-36 T 19-04-2016 ALIDE2_RS03505 9070626010545f90f228ffb6f3396f9a 320 PANTHER PTHR34216 12 124 1.3E-36 T 19-04-2016 ALIDE2_RS13180 2c92aeb7c1ceb2ed6da39f730088e23f 264 PANTHER PTHR10108 186 224 8.0E-15 T 19-04-2016 ALIDE2_RS13180 2c92aeb7c1ceb2ed6da39f730088e23f 264 PANTHER PTHR10108 1 165 8.0E-15 T 19-04-2016 ALIDE2_RS13180 2c92aeb7c1ceb2ed6da39f730088e23f 264 PANTHER PTHR10108:SF849 186 224 8.0E-15 T 19-04-2016 ALIDE2_RS13180 2c92aeb7c1ceb2ed6da39f730088e23f 264 PANTHER PTHR10108:SF849 1 165 8.0E-15 T 19-04-2016 ALIDE2_RS13180 2c92aeb7c1ceb2ed6da39f730088e23f 264 Pfam PF13649 Methyltransferase domain 62 143 7.2E-11 T 19-04-2016 ALIDE2_RS13180 2c92aeb7c1ceb2ed6da39f730088e23f 264 Gene3D G3DSA:3.40.50.150 47 155 2.1E-16 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS13180 2c92aeb7c1ceb2ed6da39f730088e23f 264 SUPERFAMILY SSF53335 24 176 8.89E-19 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS23485 597dd8a67831bcb6fcca1f07cddf068a 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 1.3E-29 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS23485 597dd8a67831bcb6fcca1f07cddf068a 302 Gene3D G3DSA:1.10.3720.10 89 296 2.1E-28 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS23485 597dd8a67831bcb6fcca1f07cddf068a 302 PANTHER PTHR30465:SF57 15 300 8.5E-192 T 19-04-2016 ALIDE2_RS23485 597dd8a67831bcb6fcca1f07cddf068a 302 SUPERFAMILY SSF161098 93 283 2.35E-29 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS23485 597dd8a67831bcb6fcca1f07cddf068a 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 69 4.3E-15 T 19-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ALIDE2_RS23485 597dd8a67831bcb6fcca1f07cddf068a 302 PANTHER PTHR30465 15 300 8.5E-192 T 19-04-2016 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 PANTHER PTHR22617 1 696 8.0E-237 T 19-04-2016 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 SMART SM00073 17 114 1.6E-27 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 425 561 1.0E-15 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 SMART SM00387 422 562 2.0E-23 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 SMART SM01231 314 377 9.6E-21 T 19-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 Gene3D G3DSA:1.10.287.560 314 378 1.5E-22 T 19-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 1.8E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 516 1.8E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 559 1.8E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 540 1.8E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 SMART SM00260 554 694 4.2E-35 T 19-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 Gene3D G3DSA:2.30.30.40 650 694 8.3E-24 T 19-04-2016 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 Gene3D G3DSA:2.30.30.40 562 583 8.3E-24 T 19-04-2016 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 SUPERFAMILY SSF47226 17 139 1.31E-29 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 SUPERFAMILY SSF50341 561 694 3.01E-30 T 19-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 SUPERFAMILY SSF55874 380 560 4.19E-36 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 Pfam PF01584 CheW-like domain 567 697 6.4E-26 T 19-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 SUPERFAMILY SSF47384 315 378 2.79E-15 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 Pfam PF01627 Hpt domain 20 111 1.5E-18 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 Gene3D G3DSA:2.40.50.180 585 649 2.2E-10 T 19-04-2016 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 314 377 1.4E-18 T 19-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 PANTHER PTHR22617:SF20 1 696 8.0E-237 T 19-04-2016 ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 Gene3D G3DSA:3.30.565.10 379 561 8.4E-33 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20770 213b193d7ff9ec06aa510eb73188ca8e 699 Gene3D G3DSA:1.20.120.160 16 156 2.1E-41 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS10260 3f718531728cde1ba626e58b0fc68a22 321 PANTHER PTHR10120:SF19 20 305 6.5E-58 T 19-04-2016 ALIDE2_RS10260 3f718531728cde1ba626e58b0fc68a22 321 PANTHER PTHR10120 20 305 6.5E-58 T 19-04-2016 ALIDE2_RS10260 3f718531728cde1ba626e58b0fc68a22 321 Gene3D G3DSA:3.30.2010.10 75 163 3.4E-24 T 19-04-2016 ALIDE2_RS10260 3f718531728cde1ba626e58b0fc68a22 321 Pfam PF01435 Peptidase family M48 84 285 7.9E-31 T 19-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ALIDE2_RS07530 3aa51068d4ff46ab7c5efc57632fe604 315 PIRSF PIRSF017082 1 315 1.7E-65 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS07530 3aa51068d4ff46ab7c5efc57632fe604 315 SUPERFAMILY SSF53850 118 277 9.77E-6 T 19-04-2016 ALIDE2_RS07530 3aa51068d4ff46ab7c5efc57632fe604 315 PANTHER PTHR30349:SF16 7 309 4.3E-57 T 19-04-2016 ALIDE2_RS07530 3aa51068d4ff46ab7c5efc57632fe604 315 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 294 2.5E-49 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS07530 3aa51068d4ff46ab7c5efc57632fe604 315 PANTHER PTHR30349 7 309 4.3E-57 T 19-04-2016 ALIDE2_RS14190 3d8c46775e67147a21e9b31ebe01e1c9 152 PANTHER PTHR36929:SF1 8 152 3.0E-24 T 19-04-2016 ALIDE2_RS14190 3d8c46775e67147a21e9b31ebe01e1c9 152 Gene3D G3DSA:3.30.530.20 5 147 1.9E-32 T 19-04-2016 IPR023393 START-like domain ALIDE2_RS14190 3d8c46775e67147a21e9b31ebe01e1c9 152 PANTHER PTHR36929 8 152 3.0E-24 T 19-04-2016 ALIDE2_RS14190 3d8c46775e67147a21e9b31ebe01e1c9 152 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 20 145 2.3E-17 T 19-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 ALIDE2_RS14190 3d8c46775e67147a21e9b31ebe01e1c9 152 SUPERFAMILY SSF55961 10 145 3.57E-33 T 19-04-2016 ALIDE2_RS05575 3c9606f31a5b2c95257077c751c23c24 147 PANTHER PTHR31964 1 147 3.6E-35 T 19-04-2016 ALIDE2_RS05575 3c9606f31a5b2c95257077c751c23c24 147 Pfam PF00582 Universal stress protein family 1 147 6.3E-32 T 19-04-2016 IPR006016 UspA GO:0006950 ALIDE2_RS05575 3c9606f31a5b2c95257077c751c23c24 147 PANTHER PTHR31964:SF45 1 147 3.6E-35 T 19-04-2016 ALIDE2_RS05575 3c9606f31a5b2c95257077c751c23c24 147 SUPERFAMILY SSF52402 2 147 1.17E-36 T 19-04-2016 ALIDE2_RS05575 3c9606f31a5b2c95257077c751c23c24 147 PRINTS PR01438 Universal stress protein signature 125 147 1.5E-19 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS05575 3c9606f31a5b2c95257077c751c23c24 147 PRINTS PR01438 Universal stress protein signature 107 119 1.5E-19 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS05575 3c9606f31a5b2c95257077c751c23c24 147 PRINTS PR01438 Universal stress protein signature 2 20 1.5E-19 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS05575 3c9606f31a5b2c95257077c751c23c24 147 Gene3D G3DSA:3.40.50.620 1 147 2.4E-39 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS05575 3c9606f31a5b2c95257077c751c23c24 147 PIRSF PIRSF006276 1 147 3.8E-17 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS07295 13dfcbfc55459801423a378e37df0ffc 423 SUPERFAMILY SSF111369 83 296 1.03E-22 T 19-04-2016 ALIDE2_RS07295 13dfcbfc55459801423a378e37df0ffc 423 Gene3D G3DSA:2.40.50.100 99 128 6.8E-14 T 19-04-2016 ALIDE2_RS07295 13dfcbfc55459801423a378e37df0ffc 423 Gene3D G3DSA:2.40.50.100 203 234 6.8E-14 T 19-04-2016 ALIDE2_RS07295 13dfcbfc55459801423a378e37df0ffc 423 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 70 394 4.6E-72 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ALIDE2_RS07295 13dfcbfc55459801423a378e37df0ffc 423 PANTHER PTHR30469 42 405 5.3E-73 T 19-04-2016 ALIDE2_RS07295 13dfcbfc55459801423a378e37df0ffc 423 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 81 296 1.1E-20 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS04220 d243f5db4bd621fcdbfd5a921ecbb8bd 125 SUPERFAMILY SSF101386 7 101 4.49E-21 T 19-04-2016 ALIDE2_RS04220 d243f5db4bd621fcdbfd5a921ecbb8bd 125 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 7 97 8.8E-28 T 19-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 ALIDE2_RS04220 d243f5db4bd621fcdbfd5a921ecbb8bd 125 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 10 100 2.1E-13 T 19-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 ALIDE2_RS04220 d243f5db4bd621fcdbfd5a921ecbb8bd 125 PANTHER PTHR21256 5 112 3.0E-35 T 19-04-2016 ALIDE2_RS04220 d243f5db4bd621fcdbfd5a921ecbb8bd 125 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 4 97 21.031 T 19-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 ALIDE2_RS10995 ebf34424b559cdec0f094ea6a5a8dd83 90 SUPERFAMILY SSF109910 7 83 2.22E-16 T 19-04-2016 IPR005631 Flavinator of succinate dehydrogenase ALIDE2_RS10995 ebf34424b559cdec0f094ea6a5a8dd83 90 Gene3D G3DSA:1.10.150.250 11 89 4.8E-19 T 19-04-2016 IPR005631 Flavinator of succinate dehydrogenase ALIDE2_RS10995 ebf34424b559cdec0f094ea6a5a8dd83 90 Pfam PF03937 Flavinator of succinate dehydrogenase 15 82 7.9E-19 T 19-04-2016 IPR005631 Flavinator of succinate dehydrogenase ALIDE2_RS08565 403ac0027349be8bb82d5ba6115d2ca7 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 9.3E-87 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS08565 403ac0027349be8bb82d5ba6115d2ca7 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 19-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 ALIDE2_RS08565 403ac0027349be8bb82d5ba6115d2ca7 363 PANTHER PTHR11835:SF37 1 362 3.7E-213 T 19-04-2016 ALIDE2_RS08565 403ac0027349be8bb82d5ba6115d2ca7 363 SMART SM01329 7 356 2.4E-176 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS08565 403ac0027349be8bb82d5ba6115d2ca7 363 SUPERFAMILY SSF53659 4 359 8.83E-116 T 19-04-2016 ALIDE2_RS08565 403ac0027349be8bb82d5ba6115d2ca7 363 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 4 358 2.9E-160 T 19-04-2016 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 ALIDE2_RS08565 403ac0027349be8bb82d5ba6115d2ca7 363 PANTHER PTHR11835 1 362 3.7E-213 T 19-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 ALIDE2_RS08565 403ac0027349be8bb82d5ba6115d2ca7 363 Gene3D G3DSA:3.40.718.10 5 350 3.3E-115 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS03045 ca5152d5b8d78a4fd1625f0e26542306 303 Pfam PF13641 Glycosyltransferase like family 2 35 210 6.1E-15 T 19-04-2016 ALIDE2_RS03045 ca5152d5b8d78a4fd1625f0e26542306 303 PANTHER PTHR22916 10 266 1.5E-23 T 19-04-2016 ALIDE2_RS03045 ca5152d5b8d78a4fd1625f0e26542306 303 PANTHER PTHR22916:SF9 10 266 1.5E-23 T 19-04-2016 ALIDE2_RS03045 ca5152d5b8d78a4fd1625f0e26542306 303 TIGRFAM TIGR01556 rhamnosyltran: rhamnosyltransferase 13 289 2.0E-61 T 19-04-2016 IPR006446 Rhamnosyltransferase KEGG: 00540+2.4.-.-|UniPathway: UPA00030 ALIDE2_RS03045 ca5152d5b8d78a4fd1625f0e26542306 303 Gene3D G3DSA:3.90.550.10 10 216 3.9E-25 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS03045 ca5152d5b8d78a4fd1625f0e26542306 303 SUPERFAMILY SSF53448 7 244 4.28E-38 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 582 598 1.2E-16 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 614 639 1.2E-16 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 436 454 1.2E-16 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 554 570 1.2E-16 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 Pfam PF00702 haloacid dehalogenase-like hydrolase 303 596 1.4E-28 T 19-04-2016 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 Gene3D G3DSA:1.20.1110.10 49 100 3.2E-76 T 19-04-2016 IPR023298 P-type ATPase, transmembrane domain ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 Gene3D G3DSA:1.20.1110.10 551 841 3.2E-76 T 19-04-2016 IPR023298 P-type ATPase, transmembrane domain ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 PANTHER PTHR24093 411 849 4.7E-193 T 19-04-2016 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 PANTHER PTHR24093 14 383 4.7E-193 T 19-04-2016 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 SUPERFAMILY SSF81665 632 843 3.01E-83 T 19-04-2016 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 SUPERFAMILY SSF81665 13 106 3.01E-83 T 19-04-2016 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 SUPERFAMILY SSF81665 207 301 3.01E-83 T 19-04-2016 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 Gene3D G3DSA:2.70.150.10 101 202 7.8E-31 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 Gene3D G3DSA:2.70.150.10 14 48 7.8E-31 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 Gene3D G3DSA:3.40.50.1000 483 537 1.5E-4 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 SUPERFAMILY SSF81653 106 202 1.57E-23 T 19-04-2016 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 Pfam PF00689 Cation transporting ATPase, C-terminus 666 837 4.9E-19 T 19-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 Pfam PF00122 E1-E2 ATPase 74 298 1.6E-53 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 SUPERFAMILY SSF56784 305 325 1.55E-54 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 SUPERFAMILY SSF56784 433 672 1.55E-54 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 Gene3D G3DSA:3.40.1110.10 298 482 1.0E-23 T 19-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 551 662 3.9E-29 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 75 325 8.3E-38 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 SMART SM00831 5 68 0.0013 T 19-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 309 315 - T 19-04-2016 IPR018303 P-type ATPase, phosphorylation site ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 Pfam PF00690 Cation transporter/ATPase, N-terminus 12 62 6.4E-8 T 19-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 PANTHER PTHR24093:SF268 411 849 4.7E-193 T 19-04-2016 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 PANTHER PTHR24093:SF268 14 383 4.7E-193 T 19-04-2016 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 152 166 2.9E-39 T 19-04-2016 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 618 2.9E-39 T 19-04-2016 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 307 321 2.9E-39 T 19-04-2016 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 582 601 2.9E-39 T 19-04-2016 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 503 513 2.9E-39 T 19-04-2016 ALIDE2_RS23145 37b59dd4188be43fb99a903c386e5fa7 849 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 481 492 2.9E-39 T 19-04-2016 ALIDE2_RS21895 c35167816258ab457400d928afd8ef70 912 SUPERFAMILY SSF52540 6 234 2.28E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21895 c35167816258ab457400d928afd8ef70 912 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS21895 c35167816258ab457400d928afd8ef70 912 PANTHER PTHR24220 9 391 3.0E-239 T 19-04-2016 ALIDE2_RS21895 c35167816258ab457400d928afd8ef70 912 SUPERFAMILY SSF52540 268 493 2.33E-60 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21895 c35167816258ab457400d928afd8ef70 912 Pfam PF12698 ABC-2 family transporter protein 569 877 1.8E-36 T 19-04-2016 ALIDE2_RS21895 c35167816258ab457400d928afd8ef70 912 Gene3D G3DSA:3.40.50.300 265 495 1.1E-68 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21895 c35167816258ab457400d928afd8ef70 912 Gene3D G3DSA:3.40.50.300 3 235 3.3E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21895 c35167816258ab457400d928afd8ef70 912 Pfam PF00005 ABC transporter 288 431 4.5E-28 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS21895 c35167816258ab457400d928afd8ef70 912 Pfam PF00005 ABC transporter 24 170 2.7E-26 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS21895 c35167816258ab457400d928afd8ef70 912 PANTHER PTHR24220:SF388 9 391 3.0E-239 T 19-04-2016 ALIDE2_RS21895 c35167816258ab457400d928afd8ef70 912 SMART SM00382 296 487 2.3E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS21895 c35167816258ab457400d928afd8ef70 912 SMART SM00382 32 248 6.3E-4 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS22985 1765c61082516441a27829f2575e5d3b 395 SUPERFAMILY SSF54862 32 83 2.37E-6 T 19-04-2016 ALIDE2_RS22985 1765c61082516441a27829f2575e5d3b 395 TIGRFAM TIGR02484 CitB: CitB domain protein 22 386 1.3E-118 T 19-04-2016 IPR012830 Citrate utilization protein B ALIDE2_RS22985 1765c61082516441a27829f2575e5d3b 395 Gene3D G3DSA:3.30.70.20 31 82 7.0E-5 T 19-04-2016 ALIDE2_RS22985 1765c61082516441a27829f2575e5d3b 395 SUPERFAMILY SSF103501 225 386 1.1E-25 T 19-04-2016 IPR023234 NarG-like domain ALIDE2_RS22985 1765c61082516441a27829f2575e5d3b 395 SUPERFAMILY SSF103501 172 198 1.1E-25 T 19-04-2016 IPR023234 NarG-like domain ALIDE2_RS23320 87e6c7b111f5d921c5f4cfa7c62165d1 769 Pfam PF01515 Phosphate acetyl/butaryl transferase 441 762 1.0E-88 T 19-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 ALIDE2_RS23320 87e6c7b111f5d921c5f4cfa7c62165d1 769 SMART SM00919 174 411 8.1E-135 T 19-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 ALIDE2_RS23320 87e6c7b111f5d921c5f4cfa7c62165d1 769 Gene3D G3DSA:3.40.50.10750 580 737 2.2E-51 T 19-04-2016 ALIDE2_RS23320 87e6c7b111f5d921c5f4cfa7c62165d1 769 Pfam PF00390 Malic enzyme, N-terminal domain 31 162 1.1E-25 T 19-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ALIDE2_RS23320 87e6c7b111f5d921c5f4cfa7c62165d1 769 SMART SM01274 29 162 7.5E-74 T 19-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ALIDE2_RS23320 87e6c7b111f5d921c5f4cfa7c62165d1 769 SUPERFAMILY SSF51735 174 462 1.35E-82 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS23320 87e6c7b111f5d921c5f4cfa7c62165d1 769 SUPERFAMILY SSF53659 440 765 1.32E-86 T 19-04-2016 ALIDE2_RS23320 87e6c7b111f5d921c5f4cfa7c62165d1 769 PIRSF PIRSF036684 9 769 0.0 T 19-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 ALIDE2_RS23320 87e6c7b111f5d921c5f4cfa7c62165d1 769 Gene3D G3DSA:3.40.50.720 172 456 6.5E-88 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS23320 87e6c7b111f5d921c5f4cfa7c62165d1 769 SUPERFAMILY SSF53223 21 172 1.29E-51 T 19-04-2016 ALIDE2_RS23320 87e6c7b111f5d921c5f4cfa7c62165d1 769 Pfam PF12434 Malate dehydrogenase enzyme 11 27 1.6E-7 T 19-04-2016 IPR032683 Malate dehydrogenase enzyme, N-terminal ALIDE2_RS23320 87e6c7b111f5d921c5f4cfa7c62165d1 769 Pfam PF03949 Malic enzyme, NAD binding domain 176 371 6.8E-22 T 19-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 ALIDE2_RS23320 87e6c7b111f5d921c5f4cfa7c62165d1 769 PANTHER PTHR23406 45 435 9.8E-156 T 19-04-2016 ALIDE2_RS23320 87e6c7b111f5d921c5f4cfa7c62165d1 769 Gene3D G3DSA:3.40.50.10380 21 171 7.4E-50 T 19-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ALIDE2_RS09840 957c31fe04f8866245b3041d8d309856 291 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 281 45.768 T 19-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 ALIDE2_RS09840 957c31fe04f8866245b3041d8d309856 291 Pfam PF02666 Phosphatidylserine decarboxylase 63 278 3.5E-59 T 19-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 ALIDE2_RS09840 957c31fe04f8866245b3041d8d309856 291 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 278 4.4E-76 T 19-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 ALIDE2_RS09840 957c31fe04f8866245b3041d8d309856 291 PANTHER PTHR10067 10 288 1.3E-101 T 19-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 ALIDE2_RS06875 8e72db2e20da27c888b5d131d06a3ebc 412 Gene3D G3DSA:1.20.1250.20 18 207 2.1E-22 T 19-04-2016 ALIDE2_RS06875 8e72db2e20da27c888b5d131d06a3ebc 412 Gene3D G3DSA:1.20.1250.20 223 409 2.3E-10 T 19-04-2016 ALIDE2_RS06875 8e72db2e20da27c888b5d131d06a3ebc 412 PANTHER PTHR23512 33 396 3.2E-29 T 19-04-2016 ALIDE2_RS06875 8e72db2e20da27c888b5d131d06a3ebc 412 SUPERFAMILY SSF103473 10 406 1.16E-50 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS06875 8e72db2e20da27c888b5d131d06a3ebc 412 Pfam PF07690 Major Facilitator Superfamily 25 282 5.0E-23 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS06875 8e72db2e20da27c888b5d131d06a3ebc 412 PANTHER PTHR23512:SF1 33 396 3.2E-29 T 19-04-2016 ALIDE2_RS14985 d72c5f4d389f9f2982703115458528b9 174 Pfam PF01202 Shikimate kinase 4 112 1.0E-7 T 19-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS14985 d72c5f4d389f9f2982703115458528b9 174 Gene3D G3DSA:3.40.50.300 1 157 1.7E-53 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14985 d72c5f4d389f9f2982703115458528b9 174 SUPERFAMILY SSF52540 1 157 1.41E-17 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14985 d72c5f4d389f9f2982703115458528b9 174 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 1 156 1.9E-44 T 19-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 ALIDE2_RS14985 d72c5f4d389f9f2982703115458528b9 174 PANTHER PTHR11603 1 156 6.2E-56 T 19-04-2016 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 SMART SM00448 1821 1934 1.6E-36 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 SMART SM00260 1644 1785 3.3E-4 T 19-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 Pfam PF01584 CheW-like domain 1656 1784 2.2E-9 T 19-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 1330 1461 2.6E-5 T 19-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1612 1630 6.0E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1556 1570 6.0E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1636 1649 6.0E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 SUPERFAMILY SSF47226 986 1101 7.85E-12 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 SMART SM00073 656 753 2.0E-4 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 SMART SM00073 1158 1267 0.0075 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 SMART SM00073 988 1079 0.25 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 SUPERFAMILY SSF47226 1167 1269 6.28E-23 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 Gene3D G3DSA:1.20.120.160 1166 1299 1.7E-25 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 PANTHER PTHR22617:SF20 635 799 7.2E-116 T 19-04-2016 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 PANTHER PTHR22617:SF20 1161 1378 7.2E-116 T 19-04-2016 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 PANTHER PTHR22617:SF20 1444 1801 7.2E-116 T 19-04-2016 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1515 1651 1.3E-10 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 SUPERFAMILY SSF47384 1330 1384 7.06E-6 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 Pfam PF01627 Hpt domain 989 1062 1.2E-7 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 Pfam PF01627 Hpt domain 658 751 1.3E-14 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 Pfam PF01627 Hpt domain 1171 1267 3.8E-15 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 Gene3D G3DSA:1.20.120.160 632 760 3.7E-27 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 Gene3D G3DSA:1.20.120.160 968 1088 2.3E-23 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 SUPERFAMILY SSF55874 1468 1650 5.76E-32 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 Gene3D G3DSA:1.10.287.560 1329 1383 6.1E-9 T 19-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 Pfam PF00072 Response regulator receiver domain 1823 1934 2.2E-27 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 SMART SM00387 1511 1652 6.0E-16 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 SUPERFAMILY SSF52172 1823 1941 4.55E-37 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 SUPERFAMILY SSF47226 26 153 2.86E-7 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 PANTHER PTHR22617 635 799 7.2E-116 T 19-04-2016 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 PANTHER PTHR22617 1161 1378 7.2E-116 T 19-04-2016 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 PANTHER PTHR22617 1444 1801 7.2E-116 T 19-04-2016 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 Gene3D G3DSA:3.40.50.2300 1821 1942 4.4E-37 T 19-04-2016 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 SMART SM01231 1329 1466 2.2E-11 T 19-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 SUPERFAMILY SSF50341 1651 1784 2.88E-19 T 19-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 Gene3D G3DSA:3.30.565.10 1467 1651 2.4E-28 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 Gene3D G3DSA:2.30.30.40 1740 1784 4.5E-13 T 19-04-2016 ALIDE2_RS19275 ef833a2c7fa3b0648b629321151a5038 1947 SUPERFAMILY SSF47226 657 772 3.14E-23 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS02340 f77b2450f94cfc9e28dc10de4ab1cf9c 242 PANTHER PTHR30598:SF4 2 231 1.4E-87 T 19-04-2016 ALIDE2_RS02340 f77b2450f94cfc9e28dc10de4ab1cf9c 242 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 5 228 7.9E-84 T 19-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 ALIDE2_RS02340 f77b2450f94cfc9e28dc10de4ab1cf9c 242 Gene3D G3DSA:1.20.950.20 5 211 8.2E-63 T 19-04-2016 ALIDE2_RS02340 f77b2450f94cfc9e28dc10de4ab1cf9c 242 PANTHER PTHR30598 2 231 1.4E-87 T 19-04-2016 ALIDE2_RS02340 f77b2450f94cfc9e28dc10de4ab1cf9c 242 Pfam PF02665 Nitrate reductase gamma subunit 6 227 1.5E-79 T 19-04-2016 IPR023234 NarG-like domain ALIDE2_RS02340 f77b2450f94cfc9e28dc10de4ab1cf9c 242 SUPERFAMILY SSF103501 4 227 1.44E-64 T 19-04-2016 IPR023234 NarG-like domain ALIDE2_RS16985 0925fc5cc2943e53d4b1e50bf27b2717 121 Pfam PF03779 SPW repeat 61 107 5.0E-15 T 19-04-2016 IPR005530 SPW repeat ALIDE2_RS16985 0925fc5cc2943e53d4b1e50bf27b2717 121 Pfam PF03779 SPW repeat 12 53 1.3E-10 T 19-04-2016 IPR005530 SPW repeat ALIDE2_RS06440 43d20584fcb645600c48d513b61b6f47 342 PANTHER PTHR22916 9 333 6.6E-23 T 19-04-2016 ALIDE2_RS06440 43d20584fcb645600c48d513b61b6f47 342 SUPERFAMILY SSF53448 8 253 1.5E-39 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS06440 43d20584fcb645600c48d513b61b6f47 342 Gene3D G3DSA:3.90.550.10 9 244 9.4E-32 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS06440 43d20584fcb645600c48d513b61b6f47 342 Pfam PF00535 Glycosyl transferase family 2 11 133 1.9E-19 T 19-04-2016 IPR001173 Glycosyltransferase 2-like ALIDE2_RS21960 4143026d0746862aa88969e2d060ea15 607 Pfam PF00672 HAMP domain 277 342 2.5E-12 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS21960 4143026d0746862aa88969e2d060ea15 607 Gene3D G3DSA:3.30.450.20 132 269 3.4E-24 T 19-04-2016 ALIDE2_RS21960 4143026d0746862aa88969e2d060ea15 607 SMART SM00283 348 595 1.3E-88 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS21960 4143026d0746862aa88969e2d060ea15 607 PANTHER PTHR32089 73 598 5.9E-153 T 19-04-2016 ALIDE2_RS21960 4143026d0746862aa88969e2d060ea15 607 PANTHER PTHR32089:SF63 73 598 5.9E-153 T 19-04-2016 ALIDE2_RS21960 4143026d0746862aa88969e2d060ea15 607 Pfam PF02743 Cache domain 94 255 1.4E-21 T 19-04-2016 IPR033479 Double Cache domain 1 ALIDE2_RS21960 4143026d0746862aa88969e2d060ea15 607 Gene3D G3DSA:1.10.287.950 363 567 2.5E-59 T 19-04-2016 ALIDE2_RS21960 4143026d0746862aa88969e2d060ea15 607 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 408 594 5.2E-60 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS21960 4143026d0746862aa88969e2d060ea15 607 SMART SM00304 293 347 1.7E-10 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS21960 4143026d0746862aa88969e2d060ea15 607 SUPERFAMILY SSF58104 315 596 6.93E-75 T 19-04-2016 ALIDE2_RS21960 4143026d0746862aa88969e2d060ea15 607 SUPERFAMILY SSF103190 89 173 4.08E-8 T 19-04-2016 IPR029151 Periplasmic sensor domain-like ALIDE2_RS11095 db9f99188645c5e144eff4ec4f209fef 413 Gene3D G3DSA:3.40.50.410 226 351 7.7E-5 T 19-04-2016 IPR002035 von Willebrand factor, type A ALIDE2_RS11095 db9f99188645c5e144eff4ec4f209fef 413 PANTHER PTHR39338 9 413 3.2E-64 T 19-04-2016 ALIDE2_RS11095 db9f99188645c5e144eff4ec4f209fef 413 Pfam PF05762 VWA domain containing CoxE-like protein 182 399 1.4E-53 T 19-04-2016 IPR008912 Uncharacterised protein family CoxE-like ALIDE2_RS11095 db9f99188645c5e144eff4ec4f209fef 413 SUPERFAMILY SSF53300 228 365 1.59E-13 T 19-04-2016 IPR002035 von Willebrand factor, type A ALIDE2_RS11095 db9f99188645c5e144eff4ec4f209fef 413 PIRSF PIRSF010256 13 410 2.8E-92 T 19-04-2016 IPR011195 Uncharacterised conserved protein UCP010256 ALIDE2_RS11095 db9f99188645c5e144eff4ec4f209fef 413 PANTHER PTHR39338:SF1 9 413 3.2E-64 T 19-04-2016 ALIDE2_RS06165 b027481e4c565b73bd6a57d98487f8dd 721 PANTHER PTHR32282 31 683 1.3E-117 T 19-04-2016 ALIDE2_RS06165 b027481e4c565b73bd6a57d98487f8dd 721 Pfam PF00912 Transglycosylase 45 219 6.9E-45 T 19-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 ALIDE2_RS06165 b027481e4c565b73bd6a57d98487f8dd 721 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 27 706 1.1E-184 T 19-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 ALIDE2_RS06165 b027481e4c565b73bd6a57d98487f8dd 721 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 631 708 1.7E-19 T 19-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 ALIDE2_RS06165 b027481e4c565b73bd6a57d98487f8dd 721 Pfam PF00905 Penicillin binding protein transpeptidase domain 296 560 9.0E-15 T 19-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ALIDE2_RS06165 b027481e4c565b73bd6a57d98487f8dd 721 SUPERFAMILY SSF53955 34 229 8.15E-44 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS06165 b027481e4c565b73bd6a57d98487f8dd 721 SUPERFAMILY SSF56601 201 607 3.68E-89 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS06165 b027481e4c565b73bd6a57d98487f8dd 721 Gene3D G3DSA:3.40.710.10 220 609 3.3E-78 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS06165 b027481e4c565b73bd6a57d98487f8dd 721 PANTHER PTHR32282:SF0 31 683 1.3E-117 T 19-04-2016 ALIDE2_RS06165 b027481e4c565b73bd6a57d98487f8dd 721 Gene3D G3DSA:1.10.3810.10 53 219 2.3E-43 T 19-04-2016 ALIDE2_RS14085 e608792fe72b1bb56100b5a099a30e5a 90 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 49 7.9E-9 T 19-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain ALIDE2_RS12465 cb856dabb8e87c83e2200415916f7a22 261 PANTHER PTHR30502 10 257 7.6E-57 T 19-04-2016 ALIDE2_RS12465 cb856dabb8e87c83e2200415916f7a22 261 SUPERFAMILY SSF51621 10 236 2.74E-60 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS12465 cb856dabb8e87c83e2200415916f7a22 261 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 23 235 3.0E-31 T 19-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ALIDE2_RS12465 cb856dabb8e87c83e2200415916f7a22 261 Gene3D G3DSA:3.20.20.60 7 238 5.4E-57 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS18465 346de5ece1d3c8b03ff033bb7fcd34b7 353 Pfam PF00005 ABC transporter 24 167 8.0E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS18465 346de5ece1d3c8b03ff033bb7fcd34b7 353 Gene3D G3DSA:3.40.50.300 8 240 8.2E-72 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18465 346de5ece1d3c8b03ff033bb7fcd34b7 353 PANTHER PTHR24220 9 248 3.0E-106 T 19-04-2016 ALIDE2_RS18465 346de5ece1d3c8b03ff033bb7fcd34b7 353 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS18465 346de5ece1d3c8b03ff033bb7fcd34b7 353 SUPERFAMILY SSF52540 8 246 5.32E-77 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18465 346de5ece1d3c8b03ff033bb7fcd34b7 353 SMART SM00382 33 225 1.6E-17 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS18465 346de5ece1d3c8b03ff033bb7fcd34b7 353 Pfam PF08402 TOBE domain 276 345 1.7E-9 T 19-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 ALIDE2_RS18465 346de5ece1d3c8b03ff033bb7fcd34b7 353 PANTHER PTHR24220:SF150 9 248 3.0E-106 T 19-04-2016 ALIDE2_RS18465 346de5ece1d3c8b03ff033bb7fcd34b7 353 SUPERFAMILY SSF50331 255 345 1.67E-12 T 19-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal ALIDE2_RS06480 24194058cec279909630503a5fabaff2 269 PANTHER PTHR10314 1 51 2.8E-18 T 19-04-2016 ALIDE2_RS06480 24194058cec279909630503a5fabaff2 269 PANTHER PTHR10314 74 246 2.8E-18 T 19-04-2016 ALIDE2_RS06480 24194058cec279909630503a5fabaff2 269 PANTHER PTHR10314:SF4 1 51 2.8E-18 T 19-04-2016 ALIDE2_RS06480 24194058cec279909630503a5fabaff2 269 PANTHER PTHR10314:SF4 74 246 2.8E-18 T 19-04-2016 ALIDE2_RS06480 24194058cec279909630503a5fabaff2 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 266 33.208 T 19-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 ALIDE2_RS06480 24194058cec279909630503a5fabaff2 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 19-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 ALIDE2_RS06480 24194058cec279909630503a5fabaff2 269 Gene3D G3DSA:3.20.20.70 2 268 1.9E-99 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS06480 24194058cec279909630503a5fabaff2 269 Pfam PF00290 Tryptophan synthase alpha chain 8 251 1.5E-82 T 19-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 ALIDE2_RS06480 24194058cec279909630503a5fabaff2 269 SUPERFAMILY SSF51366 1 252 3.01E-87 T 19-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 ALIDE2_RS06480 24194058cec279909630503a5fabaff2 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 251 1.9E-68 T 19-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 ALIDE2_RS05840 82263d6af02060df45309593237ef5f3 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 378 6.3E-22 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS05840 82263d6af02060df45309593237ef5f3 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 219 2.0E-20 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS05840 82263d6af02060df45309593237ef5f3 380 PANTHER PTHR10909:SF229 1 379 5.8E-138 T 19-04-2016 ALIDE2_RS05840 82263d6af02060df45309593237ef5f3 380 SUPERFAMILY SSF47203 231 379 1.58E-17 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS05840 82263d6af02060df45309593237ef5f3 380 Gene3D G3DSA:1.20.140.10 221 379 1.2E-27 T 19-04-2016 ALIDE2_RS05840 82263d6af02060df45309593237ef5f3 380 Gene3D G3DSA:1.10.540.10 1 120 2.1E-27 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS05840 82263d6af02060df45309593237ef5f3 380 SUPERFAMILY SSF56645 2 243 3.8E-72 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS05840 82263d6af02060df45309593237ef5f3 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 2.1E-23 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS05840 82263d6af02060df45309593237ef5f3 380 PANTHER PTHR10909 1 379 5.8E-138 T 19-04-2016 ALIDE2_RS05840 82263d6af02060df45309593237ef5f3 380 Gene3D G3DSA:2.40.110.10 125 220 3.8E-35 T 19-04-2016 ALIDE2_RS08445 3a077f0f4dc568b06c1b2f012584942f 321 Gene3D G3DSA:3.40.190.10 115 232 1.0E-19 T 19-04-2016 ALIDE2_RS08445 3a077f0f4dc568b06c1b2f012584942f 321 Pfam PF09084 NMT1/THI5 like 40 248 5.1E-21 T 19-04-2016 IPR015168 SsuA/THI5-like ALIDE2_RS08445 3a077f0f4dc568b06c1b2f012584942f 321 PANTHER PTHR30024:SF14 1 320 1.3E-89 T 19-04-2016 ALIDE2_RS08445 3a077f0f4dc568b06c1b2f012584942f 321 PANTHER PTHR30024 1 320 1.3E-89 T 19-04-2016 ALIDE2_RS08445 3a077f0f4dc568b06c1b2f012584942f 321 SUPERFAMILY SSF53850 37 255 1.76E-34 T 19-04-2016 ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 SUPERFAMILY SSF55874 275 400 3.01E-33 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 Pfam PF00672 HAMP domain 119 186 1.4E-13 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 SMART SM00388 191 253 9.1E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 294 402 1.1E-19 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 Gene3D G3DSA:1.10.287.130 182 249 1.2E-14 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 400 7.0E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 379 7.0E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 341 7.0E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 355 7.0E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 SUPERFAMILY SSF158472 138 188 6.28E-7 T 19-04-2016 ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 Gene3D G3DSA:3.30.565.10 272 402 2.4E-34 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 PANTHER PTHR24423 51 100 5.8E-63 T 19-04-2016 ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 PANTHER PTHR24423 132 400 5.8E-63 T 19-04-2016 ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 PANTHER PTHR24423:SF564 51 100 5.8E-63 T 19-04-2016 ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 PANTHER PTHR24423:SF564 132 400 5.8E-63 T 19-04-2016 ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 SMART SM00387 292 403 8.5E-33 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 SUPERFAMILY SSF47384 174 253 4.71E-14 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 SMART SM00304 138 190 3.5E-12 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS01285 e52d2fbce5d17250410bf97fad1f7ad5 403 Pfam PF00512 His Kinase A (phospho-acceptor) domain 193 253 3.3E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS16295 37eb7f244f247518f2f5e83328d05b5f 343 Gene3D G3DSA:3.30.420.40 181 307 8.5E-10 T 19-04-2016 ALIDE2_RS16295 37eb7f244f247518f2f5e83328d05b5f 343 SUPERFAMILY SSF53067 173 325 2.89E-25 T 19-04-2016 ALIDE2_RS16295 37eb7f244f247518f2f5e83328d05b5f 343 Gene3D G3DSA:3.30.420.40 8 180 2.7E-5 T 19-04-2016 ALIDE2_RS16295 37eb7f244f247518f2f5e83328d05b5f 343 Pfam PF06406 StbA protein 171 319 1.4E-4 T 19-04-2016 IPR009440 Plasmid segregation protein ParM/StbA ALIDE2_RS16295 37eb7f244f247518f2f5e83328d05b5f 343 SUPERFAMILY SSF53067 4 163 3.37E-27 T 19-04-2016 ALIDE2_RS16295 37eb7f244f247518f2f5e83328d05b5f 343 TIGRFAM TIGR03739 PRTRC_D: PRTRC system protein D 7 325 3.3E-163 T 19-04-2016 IPR022389 ParB-related, ThiF-related cassette, protein D ALIDE2_RS18795 d21a98ecf7d329ac185955b94a2b3161 408 SUPERFAMILY SSF102645 187 402 7.72E-69 T 19-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 ALIDE2_RS18795 d21a98ecf7d329ac185955b94a2b3161 408 SUPERFAMILY SSF52507 2 183 3.79E-54 T 19-04-2016 IPR003382 Flavoprotein GO:0003824 ALIDE2_RS18795 d21a98ecf7d329ac185955b94a2b3161 408 Gene3D G3DSA:3.40.50.1950 6 189 9.0E-59 T 19-04-2016 IPR003382 Flavoprotein GO:0003824 ALIDE2_RS18795 d21a98ecf7d329ac185955b94a2b3161 408 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 398 3.0E-120 T 19-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 ALIDE2_RS18795 d21a98ecf7d329ac185955b94a2b3161 408 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 189 373 1.7E-64 T 19-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 ALIDE2_RS18795 d21a98ecf7d329ac185955b94a2b3161 408 PANTHER PTHR14359:SF20 4 402 8.7E-156 T 19-04-2016 ALIDE2_RS18795 d21a98ecf7d329ac185955b94a2b3161 408 Pfam PF02441 Flavoprotein 7 138 1.2E-31 T 19-04-2016 IPR003382 Flavoprotein GO:0003824 ALIDE2_RS18795 d21a98ecf7d329ac185955b94a2b3161 408 Gene3D G3DSA:3.40.50.10300 190 402 2.3E-79 T 19-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 ALIDE2_RS18795 d21a98ecf7d329ac185955b94a2b3161 408 PANTHER PTHR14359 4 402 8.7E-156 T 19-04-2016 ALIDE2_RS16220 48c9c158efe4925ac1096d866664463d 387 SUPERFAMILY SSF103473 3 385 1.44E-43 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS16220 48c9c158efe4925ac1096d866664463d 387 Gene3D G3DSA:1.20.1250.20 3 188 1.1E-15 T 19-04-2016 ALIDE2_RS16220 48c9c158efe4925ac1096d866664463d 387 PRINTS PR01035 Tetracycline resistance protein signature 247 267 1.8E-5 T 19-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ALIDE2_RS16220 48c9c158efe4925ac1096d866664463d 387 PRINTS PR01035 Tetracycline resistance protein signature 40 59 1.8E-5 T 19-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ALIDE2_RS16220 48c9c158efe4925ac1096d866664463d 387 PRINTS PR01035 Tetracycline resistance protein signature 335 358 1.8E-5 T 19-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ALIDE2_RS16220 48c9c158efe4925ac1096d866664463d 387 PRINTS PR01035 Tetracycline resistance protein signature 130 152 1.8E-5 T 19-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ALIDE2_RS16220 48c9c158efe4925ac1096d866664463d 387 Gene3D G3DSA:1.20.1250.20 202 378 8.1E-19 T 19-04-2016 ALIDE2_RS16220 48c9c158efe4925ac1096d866664463d 387 Pfam PF07690 Major Facilitator Superfamily 216 377 1.7E-12 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS16220 48c9c158efe4925ac1096d866664463d 387 Pfam PF07690 Major Facilitator Superfamily 9 187 1.1E-17 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS00370 1550ad23e5634d9203924ddde3cf00a0 304 Gene3D G3DSA:3.40.190.10 179 265 3.3E-13 T 19-04-2016 ALIDE2_RS00370 1550ad23e5634d9203924ddde3cf00a0 304 Gene3D G3DSA:3.40.190.10 95 178 3.1E-19 T 19-04-2016 ALIDE2_RS00370 1550ad23e5634d9203924ddde3cf00a0 304 SUPERFAMILY SSF46785 2 112 5.45E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00370 1550ad23e5634d9203924ddde3cf00a0 304 PANTHER PTHR30126 1 295 1.1E-55 T 19-04-2016 ALIDE2_RS00370 1550ad23e5634d9203924ddde3cf00a0 304 SUPERFAMILY SSF53850 94 298 1.63E-38 T 19-04-2016 ALIDE2_RS00370 1550ad23e5634d9203924ddde3cf00a0 304 Gene3D G3DSA:1.10.10.10 1 86 1.3E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00370 1550ad23e5634d9203924ddde3cf00a0 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 9.9E-16 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00370 1550ad23e5634d9203924ddde3cf00a0 304 Pfam PF03466 LysR substrate binding domain 95 295 6.3E-34 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS06010 a0b319596cc5fe0a6256e6f5a6572abe 167 SUPERFAMILY SSF52949 1 155 3.87E-34 T 19-04-2016 ALIDE2_RS06010 a0b319596cc5fe0a6256e6f5a6572abe 167 PANTHER PTHR12521 1 165 2.7E-38 T 19-04-2016 ALIDE2_RS06010 a0b319596cc5fe0a6256e6f5a6572abe 167 SMART SM00506 1 140 1.5E-12 T 19-04-2016 IPR002589 Macro domain ALIDE2_RS06010 a0b319596cc5fe0a6256e6f5a6572abe 167 Pfam PF01661 Macro domain 28 138 4.0E-8 T 19-04-2016 IPR002589 Macro domain ALIDE2_RS06010 a0b319596cc5fe0a6256e6f5a6572abe 167 Gene3D G3DSA:3.40.220.10 3 140 5.1E-6 T 19-04-2016 ALIDE2_RS00830 606b27a30382bf464ae75e722df5f02a 502 Pfam PF13193 AMP-binding enzyme C-terminal domain 414 489 1.0E-13 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS00830 606b27a30382bf464ae75e722df5f02a 502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 155 166 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS00830 606b27a30382bf464ae75e722df5f02a 502 Gene3D G3DSA:3.30.300.30 400 501 3.8E-31 T 19-04-2016 ALIDE2_RS00830 606b27a30382bf464ae75e722df5f02a 502 SUPERFAMILY SSF56801 4 501 8.24E-139 T 19-04-2016 ALIDE2_RS00830 606b27a30382bf464ae75e722df5f02a 502 PANTHER PTHR24096 5 499 1.4E-132 T 19-04-2016 ALIDE2_RS00830 606b27a30382bf464ae75e722df5f02a 502 Gene3D G3DSA:3.40.50.980 3 160 2.9E-29 T 19-04-2016 ALIDE2_RS00830 606b27a30382bf464ae75e722df5f02a 502 Pfam PF00501 AMP-binding enzyme 11 405 3.8E-93 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS00830 606b27a30382bf464ae75e722df5f02a 502 Gene3D G3DSA:2.30.38.10 322 396 1.5E-24 T 19-04-2016 ALIDE2_RS00830 606b27a30382bf464ae75e722df5f02a 502 Gene3D G3DSA:3.40.50.980 161 321 8.5E-41 T 19-04-2016 ALIDE2_RS16670 ee0c52c8f46f1a38330e4b0a14b5b112 141 Pfam PF13586 Transposase DDE domain 46 130 3.2E-16 T 19-04-2016 IPR025668 Transposase DDE domain ALIDE2_RS16670 ee0c52c8f46f1a38330e4b0a14b5b112 141 PANTHER PTHR30007 1 132 7.6E-26 T 19-04-2016 ALIDE2_RS16670 ee0c52c8f46f1a38330e4b0a14b5b112 141 PANTHER PTHR30007:SF0 1 132 7.6E-26 T 19-04-2016 ALIDE2_RS05310 0569784e4cb68fbb2329173d389d6314 252 SUPERFAMILY SSF64288 61 241 2.98E-38 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ALIDE2_RS05310 0569784e4cb68fbb2329173d389d6314 252 Pfam PF07702 UTRA domain 97 234 1.0E-32 T 19-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ALIDE2_RS05310 0569784e4cb68fbb2329173d389d6314 252 SMART SM00866 95 234 1.7E-31 T 19-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ALIDE2_RS05310 0569784e4cb68fbb2329173d389d6314 252 Gene3D G3DSA:1.10.10.10 6 77 3.1E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05310 0569784e4cb68fbb2329173d389d6314 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 1.4E-18 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05310 0569784e4cb68fbb2329173d389d6314 252 Gene3D G3DSA:3.40.1410.10 88 239 9.2E-39 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ALIDE2_RS05310 0569784e4cb68fbb2329173d389d6314 252 PANTHER PTHR11751:SF432 6 77 5.2E-15 T 19-04-2016 ALIDE2_RS05310 0569784e4cb68fbb2329173d389d6314 252 PANTHER PTHR11751:SF432 202 224 5.2E-15 T 19-04-2016 ALIDE2_RS05310 0569784e4cb68fbb2329173d389d6314 252 SMART SM00345 14 73 1.0E-14 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05310 0569784e4cb68fbb2329173d389d6314 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 8.7E-10 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05310 0569784e4cb68fbb2329173d389d6314 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 8.7E-10 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05310 0569784e4cb68fbb2329173d389d6314 252 SUPERFAMILY SSF46785 2 78 2.35E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05310 0569784e4cb68fbb2329173d389d6314 252 PANTHER PTHR11751 6 77 5.2E-15 T 19-04-2016 ALIDE2_RS05310 0569784e4cb68fbb2329173d389d6314 252 PANTHER PTHR11751 202 224 5.2E-15 T 19-04-2016 ALIDE2_RS05175 2824758ce1706ab81aa2bb7cbfe85e75 363 SUPERFAMILY SSF52540 90 324 2.0E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05175 2824758ce1706ab81aa2bb7cbfe85e75 363 PANTHER PTHR23264:SF19 1 361 3.8E-164 T 19-04-2016 ALIDE2_RS05175 2824758ce1706ab81aa2bb7cbfe85e75 363 Gene3D G3DSA:3.40.50.300 94 338 1.1E-107 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05175 2824758ce1706ab81aa2bb7cbfe85e75 363 ProSitePatterns PS01215 Mrp family signature. 203 219 - T 19-04-2016 IPR000808 Mrp, conserved site GO:0005524 ALIDE2_RS05175 2824758ce1706ab81aa2bb7cbfe85e75 363 SUPERFAMILY SSF117916 1 85 3.6E-17 T 19-04-2016 ALIDE2_RS05175 2824758ce1706ab81aa2bb7cbfe85e75 363 PANTHER PTHR23264 1 361 3.8E-164 T 19-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein ALIDE2_RS05175 2824758ce1706ab81aa2bb7cbfe85e75 363 Pfam PF01883 Domain of unknown function DUF59 5 77 3.0E-21 T 19-04-2016 IPR002744 Domain of unknown function DUF59 ALIDE2_RS05175 2824758ce1706ab81aa2bb7cbfe85e75 363 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 340 37.629 T 19-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein ALIDE2_RS05175 2824758ce1706ab81aa2bb7cbfe85e75 363 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 96 339 4.0E-103 T 19-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein ALIDE2_RS12130 94614d4533f325cd1dfa6db8c2f2d769 294 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 280 1.5E-14 T 19-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ALIDE2_RS12130 94614d4533f325cd1dfa6db8c2f2d769 294 SUPERFAMILY SSF48179 167 291 4.87E-23 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS12130 94614d4533f325cd1dfa6db8c2f2d769 294 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 4.8E-11 T 19-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 ALIDE2_RS12130 94614d4533f325cd1dfa6db8c2f2d769 294 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 159 187 4.8E-11 T 19-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 ALIDE2_RS12130 94614d4533f325cd1dfa6db8c2f2d769 294 PANTHER PTHR22981 1 276 9.9E-63 T 19-04-2016 ALIDE2_RS12130 94614d4533f325cd1dfa6db8c2f2d769 294 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 165 1.4E-33 T 19-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 ALIDE2_RS12130 94614d4533f325cd1dfa6db8c2f2d769 294 Gene3D G3DSA:1.10.1040.10 168 290 4.6E-20 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS12130 94614d4533f325cd1dfa6db8c2f2d769 294 PANTHER PTHR22981:SF27 1 276 9.9E-63 T 19-04-2016 ALIDE2_RS12130 94614d4533f325cd1dfa6db8c2f2d769 294 Gene3D G3DSA:3.40.50.720 2 165 1.3E-43 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12130 94614d4533f325cd1dfa6db8c2f2d769 294 SUPERFAMILY SSF51735 5 165 9.62E-35 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12130 94614d4533f325cd1dfa6db8c2f2d769 294 PIRSF PIRSF000103 1 292 2.2E-69 T 19-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 ALIDE2_RS07285 f4f10ae6195e5b6e86f3ad164b9efe34 279 Pfam PF00494 Squalene/phytoene synthase 13 264 2.0E-79 T 19-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 ALIDE2_RS07285 f4f10ae6195e5b6e86f3ad164b9efe34 279 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 152 177 - T 19-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 ALIDE2_RS07285 f4f10ae6195e5b6e86f3ad164b9efe34 279 Gene3D G3DSA:1.10.600.10 5 278 4.0E-99 T 19-04-2016 IPR008949 Isoprenoid synthase domain ALIDE2_RS07285 f4f10ae6195e5b6e86f3ad164b9efe34 279 SUPERFAMILY SSF48576 4 276 6.24E-87 T 19-04-2016 IPR008949 Isoprenoid synthase domain ALIDE2_RS07285 f4f10ae6195e5b6e86f3ad164b9efe34 279 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 10 275 6.3E-119 T 19-04-2016 IPR017828 Squalene/phytoene synthase HpnD GO:0016117|GO:0016767 ALIDE2_RS07285 f4f10ae6195e5b6e86f3ad164b9efe34 279 PANTHER PTHR31480 11 272 4.0E-70 T 19-04-2016 ALIDE2_RS08345 c329c1477ba8faf6b2ddffc1aee41286 404 PANTHER PTHR30483 1 403 4.2E-180 T 19-04-2016 ALIDE2_RS08345 c329c1477ba8faf6b2ddffc1aee41286 404 Pfam PF13458 Periplasmic binding protein 31 366 2.5E-81 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS08345 c329c1477ba8faf6b2ddffc1aee41286 404 PANTHER PTHR30483:SF17 1 403 4.2E-180 T 19-04-2016 ALIDE2_RS08345 c329c1477ba8faf6b2ddffc1aee41286 404 SUPERFAMILY SSF53822 31 401 1.35E-84 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS08345 c329c1477ba8faf6b2ddffc1aee41286 404 Gene3D G3DSA:3.40.50.2300 158 304 5.7E-17 T 19-04-2016 ALIDE2_RS08345 c329c1477ba8faf6b2ddffc1aee41286 404 Gene3D G3DSA:3.40.50.2300 305 355 7.6E-30 T 19-04-2016 ALIDE2_RS08345 c329c1477ba8faf6b2ddffc1aee41286 404 Gene3D G3DSA:3.40.50.2300 27 150 7.6E-30 T 19-04-2016 ALIDE2_RS13725 1d008c6c6fc0667feb6df0b87d192aef 343 Gene3D G3DSA:3.30.420.40 8 180 7.6E-6 T 19-04-2016 ALIDE2_RS13725 1d008c6c6fc0667feb6df0b87d192aef 343 TIGRFAM TIGR03739 PRTRC_D: PRTRC system protein D 7 325 1.3E-161 T 19-04-2016 IPR022389 ParB-related, ThiF-related cassette, protein D ALIDE2_RS13725 1d008c6c6fc0667feb6df0b87d192aef 343 Gene3D G3DSA:3.30.420.40 181 307 9.6E-9 T 19-04-2016 ALIDE2_RS13725 1d008c6c6fc0667feb6df0b87d192aef 343 SUPERFAMILY SSF53067 4 163 1.7E-27 T 19-04-2016 ALIDE2_RS13725 1d008c6c6fc0667feb6df0b87d192aef 343 SUPERFAMILY SSF53067 174 325 1.5E-24 T 19-04-2016 ALIDE2_RS10590 caa077793e941144605f5bda5ca5f627 364 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 19-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS10590 caa077793e941144605f5bda5ca5f627 364 PIRSF PIRSF001456 3 358 4.2E-129 T 19-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS10590 caa077793e941144605f5bda5ca5f627 364 TIGRFAM TIGR00033 aroC: chorismate synthase 11 349 9.0E-130 T 19-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS10590 caa077793e941144605f5bda5ca5f627 364 PANTHER PTHR21085 2 356 1.2E-184 T 19-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS10590 caa077793e941144605f5bda5ca5f627 364 Pfam PF01264 Chorismate synthase 10 344 4.5E-128 T 19-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS10590 caa077793e941144605f5bda5ca5f627 364 SUPERFAMILY SSF103263 4 351 1.02E-136 T 19-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS10590 caa077793e941144605f5bda5ca5f627 364 Hamap MF_00300 Chorismate synthase [aroC]. 10 353 34.598 T 19-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS10590 caa077793e941144605f5bda5ca5f627 364 Gene3D G3DSA:3.60.150.10 10 351 2.1E-145 T 19-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS10590 caa077793e941144605f5bda5ca5f627 364 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 19-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS10590 caa077793e941144605f5bda5ca5f627 364 ProSitePatterns PS00789 Chorismate synthase signature 3. 318 334 - T 19-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS18020 abe4f93db864702a51d18d56b1fe89e5 331 Gene3D G3DSA:3.40.190.10 201 271 1.6E-16 T 19-04-2016 ALIDE2_RS18020 abe4f93db864702a51d18d56b1fe89e5 331 PANTHER PTHR30293:SF0 1 319 4.5E-70 T 19-04-2016 ALIDE2_RS18020 abe4f93db864702a51d18d56b1fe89e5 331 SUPERFAMILY SSF53850 89 302 4.96E-35 T 19-04-2016 ALIDE2_RS18020 abe4f93db864702a51d18d56b1fe89e5 331 PANTHER PTHR30293 1 319 4.5E-70 T 19-04-2016 ALIDE2_RS18020 abe4f93db864702a51d18d56b1fe89e5 331 Gene3D G3DSA:1.10.10.10 2 83 1.5E-29 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18020 abe4f93db864702a51d18d56b1fe89e5 331 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.0E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS18020 abe4f93db864702a51d18d56b1fe89e5 331 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.0E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS18020 abe4f93db864702a51d18d56b1fe89e5 331 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.0E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS18020 abe4f93db864702a51d18d56b1fe89e5 331 Gene3D G3DSA:3.40.190.10 90 200 6.1E-17 T 19-04-2016 ALIDE2_RS18020 abe4f93db864702a51d18d56b1fe89e5 331 SUPERFAMILY SSF46785 1 112 4.46E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18020 abe4f93db864702a51d18d56b1fe89e5 331 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.0E-21 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS18020 abe4f93db864702a51d18d56b1fe89e5 331 Pfam PF03466 LysR substrate binding domain 90 300 9.1E-33 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS20490 aee08289d8a630b94c53e959916c7875 578 Pfam PF00474 Sodium:solute symporter family 70 495 1.1E-108 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS20490 aee08289d8a630b94c53e959916c7875 578 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 70 495 2.2E-58 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS20490 aee08289d8a630b94c53e959916c7875 578 PANTHER PTHR11819:SF13 39 567 1.5E-242 T 19-04-2016 ALIDE2_RS20490 aee08289d8a630b94c53e959916c7875 578 PANTHER PTHR11819 39 567 1.5E-242 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS20490 aee08289d8a630b94c53e959916c7875 578 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 185 210 - T 19-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 SUPERFAMILY SSF55781 240 405 1.31E-15 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 Gene3D G3DSA:3.30.565.10 493 618 1.0E-9 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 Pfam PF00672 HAMP domain 163 231 9.2E-13 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 Pfam PF01590 GAF domain 269 403 2.3E-6 T 19-04-2016 IPR003018 GAF domain GO:0005515 ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 SUPERFAMILY SSF158472 184 231 3.53E-9 T 19-04-2016 ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 SMART SM00387 527 621 6.8E-14 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 PIRSF PIRSF003167 1 628 3.1E-164 T 19-04-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 Gene3D G3DSA:3.30.450.40 246 415 2.6E-18 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 SMART SM00304 182 234 7.8E-13 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 PANTHER PTHR24421:SF25 1 293 1.5E-48 T 19-04-2016 ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 PANTHER PTHR24421:SF25 417 634 1.5E-48 T 19-04-2016 ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 PANTHER PTHR24421 1 293 1.5E-48 T 19-04-2016 ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 PANTHER PTHR24421 417 634 1.5E-48 T 19-04-2016 ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 529 619 6.2E-9 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 SUPERFAMILY SSF55874 494 618 2.15E-16 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 Pfam PF07730 Histidine kinase 422 488 4.2E-15 T 19-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ALIDE2_RS02305 9ea4f9448b7162d7f03d8088cd1e1bae 638 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 31 131 4.7E-20 T 19-04-2016 IPR029095 NarX-like, N-terminal ALIDE2_RS23085 3f393d27df549a101bbae7121fa47e51 457 SMART SM00387 351 457 3.4E-26 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS23085 3f393d27df549a101bbae7121fa47e51 457 Gene3D G3DSA:3.30.565.10 316 456 7.5E-32 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS23085 3f393d27df549a101bbae7121fa47e51 457 PANTHER PTHR24423:SF496 1 7 2.0E-43 T 19-04-2016 ALIDE2_RS23085 3f393d27df549a101bbae7121fa47e51 457 PANTHER PTHR24423:SF496 191 455 2.0E-43 T 19-04-2016 ALIDE2_RS23085 3f393d27df549a101bbae7121fa47e51 457 SUPERFAMILY SSF55874 316 454 2.75E-30 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS23085 3f393d27df549a101bbae7121fa47e51 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 2.0E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS23085 3f393d27df549a101bbae7121fa47e51 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 2.0E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS23085 3f393d27df549a101bbae7121fa47e51 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 2.0E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS23085 3f393d27df549a101bbae7121fa47e51 457 PANTHER PTHR24423 1 7 2.0E-43 T 19-04-2016 ALIDE2_RS23085 3f393d27df549a101bbae7121fa47e51 457 PANTHER PTHR24423 191 455 2.0E-43 T 19-04-2016 ALIDE2_RS23085 3f393d27df549a101bbae7121fa47e51 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 455 3.9E-17 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS18415 32ba1bf903f47e228b859fc76de33794 393 SUPERFAMILY SSF56645 2 244 9.42E-75 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS18415 32ba1bf903f47e228b859fc76de33794 393 Gene3D G3DSA:1.20.140.10 232 392 3.1E-25 T 19-04-2016 ALIDE2_RS18415 32ba1bf903f47e228b859fc76de33794 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 391 1.2E-16 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS18415 32ba1bf903f47e228b859fc76de33794 393 Gene3D G3DSA:1.10.540.10 1 121 6.0E-27 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS18415 32ba1bf903f47e228b859fc76de33794 393 SUPERFAMILY SSF47203 231 393 1.3E-16 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS18415 32ba1bf903f47e228b859fc76de33794 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 121 3.8E-23 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS18415 32ba1bf903f47e228b859fc76de33794 393 Gene3D G3DSA:2.40.110.10 125 231 5.7E-33 T 19-04-2016 ALIDE2_RS18415 32ba1bf903f47e228b859fc76de33794 393 PANTHER PTHR10909 1 342 1.5E-144 T 19-04-2016 ALIDE2_RS18415 32ba1bf903f47e228b859fc76de33794 393 PANTHER PTHR10909 362 393 1.5E-144 T 19-04-2016 ALIDE2_RS18415 32ba1bf903f47e228b859fc76de33794 393 PANTHER PTHR10909:SF229 1 342 1.5E-144 T 19-04-2016 ALIDE2_RS18415 32ba1bf903f47e228b859fc76de33794 393 PANTHER PTHR10909:SF229 362 393 1.5E-144 T 19-04-2016 ALIDE2_RS18415 32ba1bf903f47e228b859fc76de33794 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 219 3.7E-19 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS17455 f733c58260ae34b6a21c62b0fd128cdc 131 PANTHER PTHR31964:SF26 1 128 8.2E-12 T 19-04-2016 ALIDE2_RS17455 f733c58260ae34b6a21c62b0fd128cdc 131 SUPERFAMILY SSF52402 1 128 6.78E-18 T 19-04-2016 ALIDE2_RS17455 f733c58260ae34b6a21c62b0fd128cdc 131 Pfam PF00582 Universal stress protein family 2 128 9.3E-17 T 19-04-2016 IPR006016 UspA GO:0006950 ALIDE2_RS17455 f733c58260ae34b6a21c62b0fd128cdc 131 PRINTS PR01438 Universal stress protein signature 106 128 4.2E-6 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS17455 f733c58260ae34b6a21c62b0fd128cdc 131 PRINTS PR01438 Universal stress protein signature 88 100 4.2E-6 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS17455 f733c58260ae34b6a21c62b0fd128cdc 131 PANTHER PTHR31964 1 128 8.2E-12 T 19-04-2016 ALIDE2_RS17455 f733c58260ae34b6a21c62b0fd128cdc 131 Gene3D G3DSA:3.40.50.620 2 128 5.9E-21 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS02905 cf08879f6a28e2420b7eb58924d27bb3 300 Gene3D G3DSA:3.40.50.1820 102 298 8.6E-30 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS02905 cf08879f6a28e2420b7eb58924d27bb3 300 Pfam PF12697 Alpha/beta hydrolase family 113 269 1.6E-8 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS02905 cf08879f6a28e2420b7eb58924d27bb3 300 SUPERFAMILY SSF53474 105 263 7.74E-25 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS20145 427af578a17a5dbe44c6df7a2b3247a1 501 SUPERFAMILY SSF53623 101 337 2.63E-67 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20145 427af578a17a5dbe44c6df7a2b3247a1 501 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 428 1.6E-22 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS20145 427af578a17a5dbe44c6df7a2b3247a1 501 SUPERFAMILY SSF53244 339 496 2.22E-47 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS20145 427af578a17a5dbe44c6df7a2b3247a1 501 Gene3D G3DSA:3.40.1390.10 20 99 1.8E-17 T 19-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20145 427af578a17a5dbe44c6df7a2b3247a1 501 PANTHER PTHR23135 8 497 6.2E-153 T 19-04-2016 ALIDE2_RS20145 427af578a17a5dbe44c6df7a2b3247a1 501 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 24 494 6.6E-133 T 19-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 ALIDE2_RS20145 427af578a17a5dbe44c6df7a2b3247a1 501 Gene3D G3DSA:3.90.190.20 343 487 2.7E-53 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS20145 427af578a17a5dbe44c6df7a2b3247a1 501 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 494 30.536 T 19-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 ALIDE2_RS20145 427af578a17a5dbe44c6df7a2b3247a1 501 SUPERFAMILY SSF63418 16 99 8.89E-17 T 19-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20145 427af578a17a5dbe44c6df7a2b3247a1 501 Pfam PF08245 Mur ligase middle domain 110 317 9.7E-41 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20145 427af578a17a5dbe44c6df7a2b3247a1 501 PANTHER PTHR23135:SF4 8 497 6.2E-153 T 19-04-2016 ALIDE2_RS20145 427af578a17a5dbe44c6df7a2b3247a1 501 Gene3D G3DSA:3.40.1190.10 101 342 5.7E-75 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20145 427af578a17a5dbe44c6df7a2b3247a1 501 Pfam PF01225 Mur ligase family, catalytic domain 25 69 4.6E-6 T 19-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS03825 eeb195181dad34706a9fea11ace66b51 324 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS03825 eeb195181dad34706a9fea11ace66b51 324 Pfam PF00005 ABC transporter 23 181 1.5E-29 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS03825 eeb195181dad34706a9fea11ace66b51 324 PANTHER PTHR24220 5 316 3.5E-141 T 19-04-2016 ALIDE2_RS03825 eeb195181dad34706a9fea11ace66b51 324 SUPERFAMILY SSF52540 3 252 4.53E-67 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03825 eeb195181dad34706a9fea11ace66b51 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 1.3E-24 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS03825 eeb195181dad34706a9fea11ace66b51 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 297 1.4E-19 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS03825 eeb195181dad34706a9fea11ace66b51 324 PANTHER PTHR24220:SF535 5 316 3.5E-141 T 19-04-2016 ALIDE2_RS03825 eeb195181dad34706a9fea11ace66b51 324 SMART SM00382 32 239 5.6E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS03825 eeb195181dad34706a9fea11ace66b51 324 Gene3D G3DSA:3.40.50.300 2 255 3.0E-76 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00745 0a35b40d481e35494ce4ddbd8a63cbd3 461 Gene3D G3DSA:3.30.1330.120 274 405 2.5E-27 T 19-04-2016 ALIDE2_RS00745 0a35b40d481e35494ce4ddbd8a63cbd3 461 PANTHER PTHR16943 12 449 5.9E-142 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS00745 0a35b40d481e35494ce4ddbd8a63cbd3 461 PANTHER PTHR16943:SF8 12 449 5.9E-142 T 19-04-2016 ALIDE2_RS00745 0a35b40d481e35494ce4ddbd8a63cbd3 461 SUPERFAMILY SSF103378 10 452 5.89E-114 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS00745 0a35b40d481e35494ce4ddbd8a63cbd3 461 Pfam PF03972 MmgE/PrpD family 12 446 1.5E-129 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS04870 e448c21f5937f82ee77a66d26dfae1bd 313 Pfam PF07729 FCD domain 160 283 2.5E-15 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS04870 e448c21f5937f82ee77a66d26dfae1bd 313 SMART SM00895 159 284 1.9E-9 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS04870 e448c21f5937f82ee77a66d26dfae1bd 313 Gene3D G3DSA:1.10.10.10 78 146 1.2E-4 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS04870 e448c21f5937f82ee77a66d26dfae1bd 313 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 64 1.2E-8 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS04870 e448c21f5937f82ee77a66d26dfae1bd 313 SUPERFAMILY SSF46785 4 69 3.14E-9 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS04870 e448c21f5937f82ee77a66d26dfae1bd 313 Gene3D G3DSA:1.10.10.10 5 65 3.5E-10 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS04870 e448c21f5937f82ee77a66d26dfae1bd 313 SMART SM00345 7 65 6.3E-4 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS04870 e448c21f5937f82ee77a66d26dfae1bd 313 SMART SM00345 91 147 2.2 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS04870 e448c21f5937f82ee77a66d26dfae1bd 313 Gene3D G3DSA:1.20.120.530 153 291 3.8E-20 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS04870 e448c21f5937f82ee77a66d26dfae1bd 313 SUPERFAMILY SSF48008 154 291 6.8E-20 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS02565 a3ffd292d76db0a588c2c147637222de 398 Pfam PF02515 CoA-transferase family III 4 368 1.1E-104 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS02565 a3ffd292d76db0a588c2c147637222de 398 Gene3D G3DSA:3.40.50.10540 2 213 1.3E-97 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS02565 a3ffd292d76db0a588c2c147637222de 398 Gene3D G3DSA:3.40.50.10540 302 391 1.3E-97 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS02565 a3ffd292d76db0a588c2c147637222de 398 SUPERFAMILY SSF89796 1 390 1.11E-116 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS02565 a3ffd292d76db0a588c2c147637222de 398 PANTHER PTHR24023:SF593 53 378 3.4E-32 T 19-04-2016 ALIDE2_RS02565 a3ffd292d76db0a588c2c147637222de 398 Gene3D G3DSA:3.30.1540.10 223 301 4.2E-22 T 19-04-2016 ALIDE2_RS02565 a3ffd292d76db0a588c2c147637222de 398 PANTHER PTHR24023 53 378 3.4E-32 T 19-04-2016 ALIDE2_RS10955 150953aa5e244708e326b65efc4b4121 504 PANTHER PTHR30097 48 413 1.4E-64 T 19-04-2016 ALIDE2_RS10955 150953aa5e244708e326b65efc4b4121 504 SUPERFAMILY SSF111369 205 326 4.05E-6 T 19-04-2016 ALIDE2_RS10955 150953aa5e244708e326b65efc4b4121 504 PANTHER PTHR30097:SF3 48 413 1.4E-64 T 19-04-2016 ALIDE2_RS10955 150953aa5e244708e326b65efc4b4121 504 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 218 394 5.1E-34 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ALIDE2_RS10955 150953aa5e244708e326b65efc4b4121 504 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 114 320 8.6E-63 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS10955 150953aa5e244708e326b65efc4b4121 504 Pfam PF11604 Copper binding periplasmic protein CusF 437 500 2.0E-20 T 19-04-2016 IPR021647 Copper binding periplasmic protein CusF ALIDE2_RS10955 150953aa5e244708e326b65efc4b4121 504 Gene3D G3DSA:2.40.50.100 126 163 3.8E-5 T 19-04-2016 ALIDE2_RS10955 150953aa5e244708e326b65efc4b4121 504 Gene3D G3DSA:2.40.50.100 211 247 3.8E-5 T 19-04-2016 ALIDE2_RS17890 ae4c8992b37d58e3d653eaab5c6192f7 309 PANTHER PTHR30419 1 307 3.6E-62 T 19-04-2016 ALIDE2_RS17890 ae4c8992b37d58e3d653eaab5c6192f7 309 PANTHER PTHR30419:SF2 1 307 3.6E-62 T 19-04-2016 ALIDE2_RS17890 ae4c8992b37d58e3d653eaab5c6192f7 309 SUPERFAMILY SSF46785 4 109 1.56E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17890 ae4c8992b37d58e3d653eaab5c6192f7 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 5.2E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS17890 ae4c8992b37d58e3d653eaab5c6192f7 309 SUPERFAMILY SSF53850 91 301 1.32E-34 T 19-04-2016 ALIDE2_RS17890 ae4c8992b37d58e3d653eaab5c6192f7 309 Gene3D G3DSA:3.40.190.10 181 268 8.6E-16 T 19-04-2016 ALIDE2_RS17890 ae4c8992b37d58e3d653eaab5c6192f7 309 Gene3D G3DSA:3.40.190.10 93 180 4.4E-14 T 19-04-2016 ALIDE2_RS17890 ae4c8992b37d58e3d653eaab5c6192f7 309 Gene3D G3DSA:1.10.10.10 5 88 3.6E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17890 ae4c8992b37d58e3d653eaab5c6192f7 309 Pfam PF03466 LysR substrate binding domain 90 297 6.2E-29 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS03040 6a92132c4befc1ddf4a2cbbd9e0c8d45 393 Pfam PF00534 Glycosyl transferases group 1 212 346 5.0E-9 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 ALIDE2_RS03040 6a92132c4befc1ddf4a2cbbd9e0c8d45 393 PANTHER PTHR12526 14 380 4.1E-18 T 19-04-2016 ALIDE2_RS03040 6a92132c4befc1ddf4a2cbbd9e0c8d45 393 Pfam PF09314 Domain of unknown function (DUF1972) 19 191 1.4E-21 T 19-04-2016 IPR015393 Domain of unknown function DUF1972 ALIDE2_RS03040 6a92132c4befc1ddf4a2cbbd9e0c8d45 393 SUPERFAMILY SSF53756 22 380 7.63E-42 T 19-04-2016 ALIDE2_RS12805 739b920b445f841ac3034454e9692105 660 Gene3D G3DSA:3.40.50.970 5 316 1.8E-104 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS12805 739b920b445f841ac3034454e9692105 660 Gene3D G3DSA:3.40.50.970 325 524 1.9E-61 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS12805 739b920b445f841ac3034454e9692105 660 PANTHER PTHR11624:SF1 333 659 3.7E-265 T 19-04-2016 ALIDE2_RS12805 739b920b445f841ac3034454e9692105 660 PANTHER PTHR11624:SF1 2 309 3.7E-265 T 19-04-2016 ALIDE2_RS12805 739b920b445f841ac3034454e9692105 660 SUPERFAMILY SSF52922 531 659 5.23E-37 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS12805 739b920b445f841ac3034454e9692105 660 PANTHER PTHR11624 333 659 3.7E-265 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS12805 739b920b445f841ac3034454e9692105 660 PANTHER PTHR11624 2 309 3.7E-265 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS12805 739b920b445f841ac3034454e9692105 660 SUPERFAMILY SSF52518 6 315 1.42E-97 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS12805 739b920b445f841ac3034454e9692105 660 Pfam PF02780 Transketolase, C-terminal domain 546 650 1.6E-11 T 19-04-2016 IPR033248 Transketolase, C-terminal domain ALIDE2_RS12805 739b920b445f841ac3034454e9692105 660 SUPERFAMILY SSF52518 364 522 3.82E-54 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS12805 739b920b445f841ac3034454e9692105 660 SMART SM00861 351 521 7.8E-46 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ALIDE2_RS12805 739b920b445f841ac3034454e9692105 660 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 330 9.5E-115 T 19-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 ALIDE2_RS12805 739b920b445f841ac3034454e9692105 660 Pfam PF02779 Transketolase, pyrimidine binding domain 363 520 1.0E-36 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ALIDE2_RS12805 739b920b445f841ac3034454e9692105 660 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 658 1.6E-210 T 19-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 ALIDE2_RS12805 739b920b445f841ac3034454e9692105 660 Gene3D G3DSA:3.40.50.920 534 658 6.3E-43 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS19140 1d80665289725e7e90aed7bdd1cc56b7 599 Gene3D G3DSA:1.20.140.10 272 459 4.8E-51 T 19-04-2016 ALIDE2_RS19140 1d80665289725e7e90aed7bdd1cc56b7 599 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 4.2E-11 T 19-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria ALIDE2_RS19140 1d80665289725e7e90aed7bdd1cc56b7 599 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 271 2.3E-13 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS19140 1d80665289725e7e90aed7bdd1cc56b7 599 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 156 3.8E-10 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS19140 1d80665289725e7e90aed7bdd1cc56b7 599 PANTHER PTHR10909:SF296 1 474 1.3E-200 T 19-04-2016 ALIDE2_RS19140 1d80665289725e7e90aed7bdd1cc56b7 599 Gene3D G3DSA:2.40.110.10 161 271 9.8E-25 T 19-04-2016 ALIDE2_RS19140 1d80665289725e7e90aed7bdd1cc56b7 599 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 449 2.6E-22 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS19140 1d80665289725e7e90aed7bdd1cc56b7 599 SUPERFAMILY SSF56645 36 282 2.88E-56 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS19140 1d80665289725e7e90aed7bdd1cc56b7 599 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 466 590 2.3E-30 T 19-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain ALIDE2_RS19140 1d80665289725e7e90aed7bdd1cc56b7 599 SUPERFAMILY SSF47203 282 456 1.22E-41 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS19140 1d80665289725e7e90aed7bdd1cc56b7 599 PANTHER PTHR10909 1 474 1.3E-200 T 19-04-2016 ALIDE2_RS19140 1d80665289725e7e90aed7bdd1cc56b7 599 Gene3D G3DSA:1.10.540.10 36 158 3.8E-14 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS12320 e1bbfd21c32b33afde06de9f3673ba03 153 Gene3D G3DSA:3.10.129.10 3 151 3.2E-36 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS12320 e1bbfd21c32b33afde06de9f3673ba03 153 SUPERFAMILY SSF54637 9 151 3.48E-32 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS12320 e1bbfd21c32b33afde06de9f3673ba03 153 PANTHER PTHR13078 10 136 2.2E-25 T 19-04-2016 ALIDE2_RS12320 e1bbfd21c32b33afde06de9f3673ba03 153 Pfam PF01575 MaoC like domain 24 118 1.4E-12 T 19-04-2016 IPR002539 MaoC-like domain ALIDE2_RS05515 c25cd1f27966cb207e66918fdec29f7e 100 SUPERFAMILY SSF46626 23 99 5.91E-17 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS05515 c25cd1f27966cb207e66918fdec29f7e 100 PRINTS PR00606 Class ID cytochrome C signature 76 86 1.7E-17 T 19-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 ALIDE2_RS05515 c25cd1f27966cb207e66918fdec29f7e 100 PRINTS PR00606 Class ID cytochrome C signature 24 37 1.7E-17 T 19-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 ALIDE2_RS05515 c25cd1f27966cb207e66918fdec29f7e 100 PRINTS PR00606 Class ID cytochrome C signature 39 52 1.7E-17 T 19-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 ALIDE2_RS05515 c25cd1f27966cb207e66918fdec29f7e 100 PRINTS PR00606 Class ID cytochrome C signature 88 98 1.7E-17 T 19-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 ALIDE2_RS05515 c25cd1f27966cb207e66918fdec29f7e 100 Gene3D G3DSA:1.10.760.10 22 100 1.3E-31 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS05515 c25cd1f27966cb207e66918fdec29f7e 100 Pfam PF00034 Cytochrome c 27 100 3.7E-6 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS23400 99eb7f35aa002f0f6f12ca014498e5fa 116 PANTHER PTHR24012 3 112 2.4E-31 T 19-04-2016 ALIDE2_RS23400 99eb7f35aa002f0f6f12ca014498e5fa 116 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 74 1.4E-22 T 19-04-2016 IPR000504 RNA recognition motif domain GO:0003676 ALIDE2_RS23400 99eb7f35aa002f0f6f12ca014498e5fa 116 SUPERFAMILY SSF54928 3 112 1.48E-35 T 19-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 ALIDE2_RS23400 99eb7f35aa002f0f6f12ca014498e5fa 116 SMART SM00360 4 77 1.2E-27 T 19-04-2016 IPR000504 RNA recognition motif domain GO:0003676 ALIDE2_RS23400 99eb7f35aa002f0f6f12ca014498e5fa 116 Gene3D G3DSA:3.30.70.330 2 98 2.8E-31 T 19-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 ALIDE2_RS15590 b9740e669fc70ec5befd03e2a32c9d7b 177 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.266 T 19-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 ALIDE2_RS15590 b9740e669fc70ec5befd03e2a32c9d7b 177 SUPERFAMILY SSF50324 3 175 1.57E-67 T 19-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 ALIDE2_RS15590 b9740e669fc70ec5befd03e2a32c9d7b 177 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 19-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 ALIDE2_RS15590 b9740e669fc70ec5befd03e2a32c9d7b 177 Pfam PF00719 Inorganic pyrophosphatase 18 174 7.8E-52 T 19-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 ALIDE2_RS15590 b9740e669fc70ec5befd03e2a32c9d7b 177 Gene3D G3DSA:3.90.80.10 4 175 4.4E-61 T 19-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 ALIDE2_RS15590 b9740e669fc70ec5befd03e2a32c9d7b 177 PANTHER PTHR10286 9 175 1.4E-67 T 19-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 ALIDE2_RS13390 56964a9bb9cdedf536e811964e948684 500 SUPERFAMILY SSF56349 124 454 1.38E-35 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS13390 56964a9bb9cdedf536e811964e948684 500 Pfam PF13356 Domain of unknown function (DUF4102) 58 100 1.4E-6 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 ALIDE2_RS13390 56964a9bb9cdedf536e811964e948684 500 Gene3D G3DSA:1.10.443.10 239 452 1.4E-21 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS13390 56964a9bb9cdedf536e811964e948684 500 PANTHER PTHR30629 272 376 2.7E-47 T 19-04-2016 ALIDE2_RS13390 56964a9bb9cdedf536e811964e948684 500 PANTHER PTHR30629 393 489 2.7E-47 T 19-04-2016 ALIDE2_RS13390 56964a9bb9cdedf536e811964e948684 500 PANTHER PTHR30629 6 256 2.7E-47 T 19-04-2016 ALIDE2_RS13390 56964a9bb9cdedf536e811964e948684 500 Gene3D G3DSA:1.10.150.130 124 220 1.4E-8 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS13390 56964a9bb9cdedf536e811964e948684 500 Pfam PF00589 Phage integrase family 275 444 1.2E-11 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 SUPERFAMILY SSF50447 845 941 3.95E-30 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 PANTHER PTHR23115:SF184 796 941 1.6E-197 T 19-04-2016 ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 PANTHER PTHR23115:SF184 427 771 1.6E-197 T 19-04-2016 ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 363 943 8.6E-255 T 19-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 PANTHER PTHR23115 796 941 1.6E-197 T 19-04-2016 ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 PANTHER PTHR23115 427 771 1.6E-197 T 19-04-2016 ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 Gene3D G3DSA:2.40.30.10 845 941 8.2E-34 T 19-04-2016 ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 Gene3D G3DSA:2.40.30.10 615 708 9.4E-24 T 19-04-2016 ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 447 601 8.4E-29 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 Pfam PF00009 Elongation factor Tu GTP binding domain 448 604 5.6E-32 T 19-04-2016 ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 SUPERFAMILY SSF52156 721 850 4.84E-36 T 19-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 Gene3D G3DSA:3.30.56.50 3 51 2.9E-16 T 19-04-2016 ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 SUPERFAMILY SSF50447 616 698 9.66E-26 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 SUPERFAMILY SSF46955 4 51 8.24E-9 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 Gene3D G3DSA:3.40.50.300 440 602 1.6E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 SUPERFAMILY SSF52540 438 613 2.15E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 99 2.4E-14 T 19-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.2E-7 T 19-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 366 417 1.8E-14 T 19-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 941 17.206 T 19-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 Gene3D G3DSA:3.40.50.10050 744 822 1.1E-23 T 19-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 ALIDE2_RS10665 40f5a513c1a9e09569e931c24159230a 943 Pfam PF11987 Translation-initiation factor 2 729 833 1.2E-34 T 19-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 ALIDE2_RS18395 6db44a85749ca7f25fbb49f738d11585 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 13.612 T 19-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18395 6db44a85749ca7f25fbb49f738d11585 56 PANTHER PTHR15238 1 56 4.7E-20 T 19-04-2016 ALIDE2_RS18395 6db44a85749ca7f25fbb49f738d11585 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 6.3E-24 T 19-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18395 6db44a85749ca7f25fbb49f738d11585 56 SUPERFAMILY SSF57829 3 54 5.68E-18 T 19-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 ALIDE2_RS18395 6db44a85749ca7f25fbb49f738d11585 56 Pfam PF00471 Ribosomal protein L33 8 54 5.5E-16 T 19-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18395 6db44a85749ca7f25fbb49f738d11585 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 19-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS15925 4a49abb05f7996939d725f85d40cbfed 283 Gene3D G3DSA:1.10.230.10 125 224 3.2E-13 T 19-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain ALIDE2_RS15925 4a49abb05f7996939d725f85d40cbfed 283 SUPERFAMILY SSF48256 12 263 1.14E-52 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS15925 4a49abb05f7996939d725f85d40cbfed 283 Pfam PF00285 Citrate synthase, C-terminal domain 62 254 2.0E-30 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS15925 4a49abb05f7996939d725f85d40cbfed 283 Pfam PF00285 Citrate synthase, C-terminal domain 18 65 2.2E-6 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS15925 4a49abb05f7996939d725f85d40cbfed 283 PRINTS PR00143 Citrate synthase signature 67 82 5.69E-5 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS15925 4a49abb05f7996939d725f85d40cbfed 283 PRINTS PR00143 Citrate synthase signature 151 171 5.69E-5 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS15925 4a49abb05f7996939d725f85d40cbfed 283 PRINTS PR00143 Citrate synthase signature 89 117 5.69E-5 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS15925 4a49abb05f7996939d725f85d40cbfed 283 PRINTS PR00143 Citrate synthase signature 211 227 5.69E-5 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS15925 4a49abb05f7996939d725f85d40cbfed 283 PRINTS PR00143 Citrate synthase signature 231 245 5.69E-5 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS15925 4a49abb05f7996939d725f85d40cbfed 283 Gene3D G3DSA:1.10.580.10 19 62 3.6E-9 T 19-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 ALIDE2_RS15925 4a49abb05f7996939d725f85d40cbfed 283 Gene3D G3DSA:1.10.580.10 63 124 1.8E-12 T 19-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 ALIDE2_RS15925 4a49abb05f7996939d725f85d40cbfed 283 PANTHER PTHR11739:SF4 7 254 1.3E-27 T 19-04-2016 ALIDE2_RS15925 4a49abb05f7996939d725f85d40cbfed 283 PANTHER PTHR11739 7 254 1.3E-27 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 ALIDE2_RS05220 985b42643b2ab379ec69c8c1f0e247d6 633 SUPERFAMILY SSF142019 222 436 1.57E-63 T 19-04-2016 ALIDE2_RS05220 985b42643b2ab379ec69c8c1f0e247d6 633 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 364 379 - T 19-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 ALIDE2_RS05220 985b42643b2ab379ec69c8c1f0e247d6 633 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 254 415 9.9E-38 T 19-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain ALIDE2_RS05220 985b42643b2ab379ec69c8c1f0e247d6 633 PANTHER PTHR11780:SF10 112 602 4.3E-149 T 19-04-2016 ALIDE2_RS05220 985b42643b2ab379ec69c8c1f0e247d6 633 SUPERFAMILY SSF52833 39 185 5.48E-32 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS05220 985b42643b2ab379ec69c8c1f0e247d6 633 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 53 182 1.4E-23 T 19-04-2016 ALIDE2_RS05220 985b42643b2ab379ec69c8c1f0e247d6 633 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 527 603 1.9E-20 T 19-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 ALIDE2_RS05220 985b42643b2ab379ec69c8c1f0e247d6 633 SUPERFAMILY SSF140490 526 602 7.98E-24 T 19-04-2016 ALIDE2_RS05220 985b42643b2ab379ec69c8c1f0e247d6 633 Gene3D G3DSA:3.40.30.10 115 167 1.3E-6 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS05220 985b42643b2ab379ec69c8c1f0e247d6 633 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 539 550 - T 19-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 ALIDE2_RS05220 985b42643b2ab379ec69c8c1f0e247d6 633 PANTHER PTHR11780 112 602 4.3E-149 T 19-04-2016 ALIDE2_RS05220 985b42643b2ab379ec69c8c1f0e247d6 633 SMART SM00928 526 571 3.1E-20 T 19-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 ALIDE2_RS05220 985b42643b2ab379ec69c8c1f0e247d6 633 SUPERFAMILY SSF142984 438 520 2.35E-21 T 19-04-2016 ALIDE2_RS05220 985b42643b2ab379ec69c8c1f0e247d6 633 Pfam PF10531 SLBB domain 440 489 3.4E-8 T 19-04-2016 IPR019554 Soluble ligand binding domain ALIDE2_RS05860 e0592626a0a6cf2a470efda3fc28d564 410 Gene3D G3DSA:3.90.1150.10 246 404 3.1E-45 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS05860 e0592626a0a6cf2a470efda3fc28d564 410 SUPERFAMILY SSF53383 5 400 1.28E-96 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS05860 e0592626a0a6cf2a470efda3fc28d564 410 Gene3D G3DSA:3.40.640.10 51 245 2.0E-58 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS05860 e0592626a0a6cf2a470efda3fc28d564 410 PANTHER PTHR11751:SF303 9 405 5.1E-159 T 19-04-2016 ALIDE2_RS05860 e0592626a0a6cf2a470efda3fc28d564 410 Pfam PF00155 Aminotransferase class I and II 34 395 1.7E-46 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ALIDE2_RS05860 e0592626a0a6cf2a470efda3fc28d564 410 PANTHER PTHR11751 9 405 5.1E-159 T 19-04-2016 ALIDE2_RS21555 4dfff0a36a080fbf81f2379e6a0e3e26 331 Pfam PF00589 Phage integrase family 126 297 1.4E-37 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS21555 4dfff0a36a080fbf81f2379e6a0e3e26 331 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 98 2.1E-15 T 19-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ALIDE2_RS21555 4dfff0a36a080fbf81f2379e6a0e3e26 331 SUPERFAMILY SSF56349 10 305 6.18E-47 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS21555 4dfff0a36a080fbf81f2379e6a0e3e26 331 Gene3D G3DSA:1.10.150.130 15 98 7.4E-14 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS21555 4dfff0a36a080fbf81f2379e6a0e3e26 331 PANTHER PTHR30349 15 326 6.1E-60 T 19-04-2016 ALIDE2_RS21555 4dfff0a36a080fbf81f2379e6a0e3e26 331 Gene3D G3DSA:1.10.443.10 126 303 2.5E-43 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS21555 4dfff0a36a080fbf81f2379e6a0e3e26 331 PANTHER PTHR30349:SF5 15 326 6.1E-60 T 19-04-2016 ALIDE2_RS10640 f3e74ac84ab1a41716314ce5fef71359 216 Pfam PF00034 Cytochrome c 93 176 6.2E-5 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS10640 f3e74ac84ab1a41716314ce5fef71359 216 Gene3D G3DSA:1.10.760.10 96 178 5.8E-19 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS10640 f3e74ac84ab1a41716314ce5fef71359 216 Gene3D G3DSA:1.10.760.10 4 74 7.4E-20 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS10640 f3e74ac84ab1a41716314ce5fef71359 216 PANTHER PTHR33751:SF2 3 186 2.2E-63 T 19-04-2016 ALIDE2_RS10640 f3e74ac84ab1a41716314ce5fef71359 216 PIRSF PIRSF000005 1 180 2.2E-58 T 19-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 ALIDE2_RS10640 f3e74ac84ab1a41716314ce5fef71359 216 PANTHER PTHR33751 3 186 2.2E-63 T 19-04-2016 ALIDE2_RS10640 f3e74ac84ab1a41716314ce5fef71359 216 SUPERFAMILY SSF46626 7 74 7.46E-17 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS10640 f3e74ac84ab1a41716314ce5fef71359 216 SUPERFAMILY SSF46626 78 177 2.07E-14 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS17960 e8be623f5c7f07c54703fe1ede1da354 159 Pfam PF02542 YgbB family 3 156 5.4E-61 T 19-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17960 e8be623f5c7f07c54703fe1ede1da354 159 SUPERFAMILY SSF69765 1 158 6.41E-61 T 19-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17960 e8be623f5c7f07c54703fe1ede1da354 159 PANTHER PTHR32125 1 156 3.7E-46 T 19-04-2016 ALIDE2_RS17960 e8be623f5c7f07c54703fe1ede1da354 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 3 158 34.675 T 19-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17960 e8be623f5c7f07c54703fe1ede1da354 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 37 52 - T 19-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17960 e8be623f5c7f07c54703fe1ede1da354 159 Gene3D G3DSA:3.30.1330.50 1 158 5.9E-66 T 19-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17960 e8be623f5c7f07c54703fe1ede1da354 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 4 158 2.4E-61 T 19-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS18280 c0568e1228d908956841b48ffed4b84e 84 Gene3D G3DSA:3.30.1320.10 1 79 4.9E-30 T 19-04-2016 IPR023803 Ribosomal protein S16 domain ALIDE2_RS18280 c0568e1228d908956841b48ffed4b84e 84 PANTHER PTHR12919 1 78 2.7E-29 T 19-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18280 c0568e1228d908956841b48ffed4b84e 84 Pfam PF00886 Ribosomal protein S16 8 68 2.5E-22 T 19-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18280 c0568e1228d908956841b48ffed4b84e 84 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 3.1E-25 T 19-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18280 c0568e1228d908956841b48ffed4b84e 84 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.112 T 19-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18280 c0568e1228d908956841b48ffed4b84e 84 SUPERFAMILY SSF54565 1 77 5.1E-27 T 19-04-2016 IPR023803 Ribosomal protein S16 domain ALIDE2_RS21680 d94c5dcefcbba48772cf70e4eb9b4ec0 290 PANTHER PTHR11048:SF7 7 290 2.7E-64 T 19-04-2016 ALIDE2_RS21680 d94c5dcefcbba48772cf70e4eb9b4ec0 290 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 25.753 T 19-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 ALIDE2_RS21680 d94c5dcefcbba48772cf70e4eb9b4ec0 290 Pfam PF01040 UbiA prenyltransferase family 28 269 5.0E-54 T 19-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 ALIDE2_RS21680 d94c5dcefcbba48772cf70e4eb9b4ec0 290 PANTHER PTHR11048 7 290 2.7E-64 T 19-04-2016 ALIDE2_RS21680 d94c5dcefcbba48772cf70e4eb9b4ec0 290 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 12 287 4.0E-83 T 19-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 ALIDE2_RS21680 d94c5dcefcbba48772cf70e4eb9b4ec0 290 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 19-04-2016 IPR030470 UbiA prenyltransferase conserved site ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 7.0E-118 T 19-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 SUPERFAMILY SSF51905 1 313 5.34E-52 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PANTHER PTHR22912:SF48 1 316 5.0E-156 T 19-04-2016 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 19-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 5.3E-39 T 19-04-2016 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.3E-39 T 19-04-2016 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 5.3E-39 T 19-04-2016 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 5.3E-39 T 19-04-2016 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 5.3E-39 T 19-04-2016 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 Gene3D G3DSA:3.50.50.60 4 110 3.1E-35 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PANTHER PTHR22912 1 316 5.0E-156 T 19-04-2016 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 3.6E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 Gene3D G3DSA:3.50.50.60 111 307 3.9E-31 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.4E-72 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.4E-72 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.4E-72 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.4E-72 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 1.4E-72 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.4E-72 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.4E-72 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.4E-72 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS18385 13c1a478eaad94d4b1812476698be8e5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.4E-72 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ALIDE2_RS03145 489f345958f6a8754c50431b19d81f41 296 Hamap MF_00082_B Acetylglutamate kinase [argB]. 27 295 35.426 T 19-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS03145 489f345958f6a8754c50431b19d81f41 296 PRINTS PR00474 Glutamate 5-kinase family signature 195 222 1.6E-6 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 ALIDE2_RS03145 489f345958f6a8754c50431b19d81f41 296 PRINTS PR00474 Glutamate 5-kinase family signature 245 265 1.6E-6 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 ALIDE2_RS03145 489f345958f6a8754c50431b19d81f41 296 Pfam PF00696 Amino acid kinase family 29 271 1.2E-44 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS03145 489f345958f6a8754c50431b19d81f41 296 PIRSF PIRSF000728 14 295 1.2E-101 T 19-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS03145 489f345958f6a8754c50431b19d81f41 296 TIGRFAM TIGR00761 argB: acetylglutamate kinase 30 270 8.8E-73 T 19-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS03145 489f345958f6a8754c50431b19d81f41 296 Gene3D G3DSA:3.40.1160.10 27 294 5.3E-101 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS03145 489f345958f6a8754c50431b19d81f41 296 SUPERFAMILY SSF53633 9 295 3.8E-89 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS03145 489f345958f6a8754c50431b19d81f41 296 PANTHER PTHR23342 7 294 1.4E-110 T 19-04-2016 ALIDE2_RS17150 f6b622de9eb7390ee823b7ad636d7078 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 260 6.6E-102 T 19-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 ALIDE2_RS17150 f6b622de9eb7390ee823b7ad636d7078 262 Gene3D G3DSA:2.160.10.10 2 188 3.7E-52 T 19-04-2016 ALIDE2_RS17150 f6b622de9eb7390ee823b7ad636d7078 262 SUPERFAMILY SSF51161 2 260 1.51E-78 T 19-04-2016 IPR011004 Trimeric LpxA-like ALIDE2_RS17150 f6b622de9eb7390ee823b7ad636d7078 262 PANTHER PTHR23416:SF8 4 254 3.5E-123 T 19-04-2016 ALIDE2_RS17150 f6b622de9eb7390ee823b7ad636d7078 262 Gene3D G3DSA:1.20.1180.10 193 262 4.3E-22 T 19-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 ALIDE2_RS17150 f6b622de9eb7390ee823b7ad636d7078 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 262 45.928 T 19-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 ALIDE2_RS17150 f6b622de9eb7390ee823b7ad636d7078 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 19 48 3.6E-7 T 19-04-2016 IPR001451 Hexapeptide repeat ALIDE2_RS17150 f6b622de9eb7390ee823b7ad636d7078 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 139 3.0E-8 T 19-04-2016 IPR001451 Hexapeptide repeat ALIDE2_RS17150 f6b622de9eb7390ee823b7ad636d7078 262 PIRSF PIRSF000456 1 262 5.2E-105 T 19-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 ALIDE2_RS17150 f6b622de9eb7390ee823b7ad636d7078 262 PANTHER PTHR23416 4 254 3.5E-123 T 19-04-2016 ALIDE2_RS17150 f6b622de9eb7390ee823b7ad636d7078 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 260 2.0E-28 T 19-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 ALIDE2_RS06425 b2e525c4c95b0809cd0efc73e80b4ceb 208 PANTHER PTHR30576 1 204 9.4E-87 T 19-04-2016 ALIDE2_RS06425 b2e525c4c95b0809cd0efc73e80b4ceb 208 Pfam PF02397 Bacterial sugar transferase 3 196 4.2E-54 T 19-04-2016 IPR003362 Bacterial sugar transferase ALIDE2_RS01090 aa98cbd6a014fb876bf404d0b0da18bc 377 Pfam PF00665 Integrase core domain 3 125 4.3E-17 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS01090 aa98cbd6a014fb876bf404d0b0da18bc 377 Gene3D G3DSA:3.30.420.10 31 169 9.7E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS01090 aa98cbd6a014fb876bf404d0b0da18bc 377 PANTHER PTHR35004 1 317 4.8E-61 T 19-04-2016 ALIDE2_RS01090 aa98cbd6a014fb876bf404d0b0da18bc 377 PANTHER PTHR35004:SF2 1 317 4.8E-61 T 19-04-2016 ALIDE2_RS14195 c0359fe23c3ce547e709a5b9ba93b371 248 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 6 247 2.3E-73 T 19-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 ALIDE2_RS14195 c0359fe23c3ce547e709a5b9ba93b371 248 Pfam PF00588 SpoU rRNA Methylase family 101 241 2.1E-39 T 19-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ALIDE2_RS14195 c0359fe23c3ce547e709a5b9ba93b371 248 SUPERFAMILY SSF55315 2 78 7.42E-16 T 19-04-2016 IPR029064 50S ribosomal protein L30e-like ALIDE2_RS14195 c0359fe23c3ce547e709a5b9ba93b371 248 SMART SM00967 6 82 2.9E-14 T 19-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 ALIDE2_RS14195 c0359fe23c3ce547e709a5b9ba93b371 248 SUPERFAMILY SSF75217 97 248 2.35E-48 T 19-04-2016 IPR029028 Alpha/beta knot methyltransferases ALIDE2_RS14195 c0359fe23c3ce547e709a5b9ba93b371 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 78 6.5E-14 T 19-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 ALIDE2_RS14195 c0359fe23c3ce547e709a5b9ba93b371 248 PANTHER PTHR12029 6 248 5.1E-67 T 19-04-2016 ALIDE2_RS14195 c0359fe23c3ce547e709a5b9ba93b371 248 Gene3D G3DSA:3.30.1330.30 1 77 1.7E-19 T 19-04-2016 IPR029064 50S ribosomal protein L30e-like ALIDE2_RS14195 c0359fe23c3ce547e709a5b9ba93b371 248 Gene3D G3DSA:3.40.1280.10 99 247 4.7E-53 T 19-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ALIDE2_RS14195 c0359fe23c3ce547e709a5b9ba93b371 248 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 248 42.968 T 19-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 SUPERFAMILY SSF51621 273 571 1.6E-95 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 179 580 1.9E-124 T 19-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 208 219 - T 19-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 7.3E-28 T 19-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 471 489 - T 19-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 Pfam PF00391 PEP-utilising enzyme, mobile domain 180 249 4.6E-24 T 19-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 276 564 9.1E-103 T 19-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 PIRSF PIRSF000732 1 587 6.4E-196 T 19-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 317 336 3.7E-22 T 19-04-2016 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 471 486 3.7E-22 T 19-04-2016 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 524 536 3.7E-22 T 19-04-2016 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 488 503 3.7E-22 T 19-04-2016 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 Gene3D G3DSA:3.20.20.60 280 582 1.2E-95 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 Gene3D G3DSA:3.50.30.10 136 279 3.6E-44 T 19-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 SUPERFAMILY SSF47831 27 146 3.27E-31 T 19-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 Gene3D G3DSA:1.10.274.10 27 135 2.5E-34 T 19-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 PANTHER PTHR22931:SF28 71 137 2.7E-146 T 19-04-2016 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 PANTHER PTHR22931:SF28 158 574 2.7E-146 T 19-04-2016 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 PANTHER PTHR22931 71 137 2.7E-146 T 19-04-2016 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 PANTHER PTHR22931 158 574 2.7E-146 T 19-04-2016 ALIDE2_RS01845 1e2f0ed361dd29d0f563d1356995be42 588 SUPERFAMILY SSF52009 171 269 2.75E-29 T 19-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 SUPERFAMILY SSF52540 138 442 3.05E-60 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 6.4E-9 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.4E-9 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 435 7.5E-170 T 19-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 Gene3D G3DSA:3.30.300.20 360 437 1.2E-24 T 19-04-2016 IPR015946 K homology domain-like, alpha/beta ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 158 8.9E-22 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 180 338 1.5E-26 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 PANTHER PTHR11649 1 437 5.3E-136 T 19-04-2016 ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 PANTHER PTHR11649:SF5 1 437 5.3E-136 T 19-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 Hamap MF_00195 GTPase Der [der]. 2 438 37.929 T 19-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 Gene3D G3DSA:3.40.50.300 3 164 8.3E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 Gene3D G3DSA:3.40.50.300 177 359 4.7E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 355 435 4.5E-24 T 19-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 Pfam PF01926 50S ribosome-binding GTPase 5 120 4.8E-27 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 Pfam PF01926 50S ribosome-binding GTPase 182 299 7.2E-23 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 SUPERFAMILY SSF52540 4 163 2.76E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07055 6ebea550c4bc670892b21577f14a66d7 447 PIRSF PIRSF006485 1 443 5.2E-168 T 19-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 ALIDE2_RS00470 ba780e86a348b19364de40a9ed7549f8 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 1.9E-28 T 19-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 ALIDE2_RS00470 ba780e86a348b19364de40a9ed7549f8 89 Gene3D G3DSA:3.30.1070.10 33 85 4.7E-21 T 19-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 ALIDE2_RS00470 ba780e86a348b19364de40a9ed7549f8 89 SUPERFAMILY SSF55229 34 85 5.36E-15 T 19-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 ALIDE2_RS00470 ba780e86a348b19364de40a9ed7549f8 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 9.2E-25 T 19-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 ALIDE2_RS00470 ba780e86a348b19364de40a9ed7549f8 89 PANTHER PTHR33404 1 84 9.6E-19 T 19-04-2016 ALIDE2_RS00470 ba780e86a348b19364de40a9ed7549f8 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 18.895 T 19-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 ALIDE2_RS22700 251a7e07e017bb34d2b6b051063b7952 569 Gene3D G3DSA:1.20.1250.20 58 242 2.4E-21 T 19-04-2016 ALIDE2_RS22700 251a7e07e017bb34d2b6b051063b7952 569 Gene3D G3DSA:1.20.1250.20 268 448 7.5E-9 T 19-04-2016 ALIDE2_RS22700 251a7e07e017bb34d2b6b051063b7952 569 PANTHER PTHR23513 40 470 1.0E-104 T 19-04-2016 ALIDE2_RS22700 251a7e07e017bb34d2b6b051063b7952 569 Pfam PF05977 Transmembrane secretion effector 50 565 1.7E-151 T 19-04-2016 IPR010290 Transmembrane secretion effector ALIDE2_RS22700 251a7e07e017bb34d2b6b051063b7952 569 PANTHER PTHR23513:SF7 40 470 1.0E-104 T 19-04-2016 ALIDE2_RS22700 251a7e07e017bb34d2b6b051063b7952 569 SUPERFAMILY SSF103473 59 447 2.62E-49 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS12275 abaec64bcdb19eab171fb45b27d445a8 307 Gene3D G3DSA:1.10.8.10 10 106 6.1E-6 T 19-04-2016 ALIDE2_RS12275 abaec64bcdb19eab171fb45b27d445a8 307 PANTHER PTHR18895 21 301 1.8E-85 T 19-04-2016 ALIDE2_RS12275 abaec64bcdb19eab171fb45b27d445a8 307 Pfam PF05175 Methyltransferase small domain 133 216 3.5E-16 T 19-04-2016 IPR007848 Methyltransferase small domain GO:0008168 ALIDE2_RS12275 abaec64bcdb19eab171fb45b27d445a8 307 PANTHER PTHR18895:SF66 21 301 1.8E-85 T 19-04-2016 ALIDE2_RS12275 abaec64bcdb19eab171fb45b27d445a8 307 Gene3D G3DSA:3.40.50.150 111 282 2.8E-45 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS12275 abaec64bcdb19eab171fb45b27d445a8 307 PIRSF PIRSF037167 5 305 4.6E-95 T 19-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 ALIDE2_RS12275 abaec64bcdb19eab171fb45b27d445a8 307 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 19-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ALIDE2_RS12275 abaec64bcdb19eab171fb45b27d445a8 307 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 34 296 4.3E-52 T 19-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 ALIDE2_RS12275 abaec64bcdb19eab171fb45b27d445a8 307 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 9 295 7.5E-95 T 19-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 ALIDE2_RS12275 abaec64bcdb19eab171fb45b27d445a8 307 SUPERFAMILY SSF53335 18 266 1.15E-42 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS07475 469beb9e4d8125fc3ac4b5a332170539 452 PANTHER PTHR13943 143 451 2.9E-74 T 19-04-2016 ALIDE2_RS07475 469beb9e4d8125fc3ac4b5a332170539 452 PANTHER PTHR13943 41 114 2.9E-74 T 19-04-2016 ALIDE2_RS07475 469beb9e4d8125fc3ac4b5a332170539 452 Pfam PF07287 Protein of unknown function (DUF1446) 6 366 1.1E-111 T 19-04-2016 IPR010839 Protein of unknown function DUF1446 ALIDE2_RS07475 469beb9e4d8125fc3ac4b5a332170539 452 PANTHER PTHR13943:SF48 143 451 2.9E-74 T 19-04-2016 ALIDE2_RS07475 469beb9e4d8125fc3ac4b5a332170539 452 PANTHER PTHR13943:SF48 41 114 2.9E-74 T 19-04-2016 ALIDE2_RS22680 7d0f284d271699495f392506a37af0fd 631 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 612 46.775 T 19-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ALIDE2_RS22680 7d0f284d271699495f392506a37af0fd 631 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 128 596 6.7E-143 T 19-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ALIDE2_RS22680 7d0f284d271699495f392506a37af0fd 631 Pfam PF02355 Protein export membrane protein 429 599 4.2E-18 T 19-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ALIDE2_RS22680 7d0f284d271699495f392506a37af0fd 631 Pfam PF07549 SecD/SecF GG Motif 121 146 2.7E-6 T 19-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ALIDE2_RS22680 7d0f284d271699495f392506a37af0fd 631 PANTHER PTHR30081:SF1 1 178 4.6E-174 T 19-04-2016 ALIDE2_RS22680 7d0f284d271699495f392506a37af0fd 631 PANTHER PTHR30081:SF1 231 289 4.6E-174 T 19-04-2016 ALIDE2_RS22680 7d0f284d271699495f392506a37af0fd 631 PANTHER PTHR30081:SF1 322 631 4.6E-174 T 19-04-2016 ALIDE2_RS22680 7d0f284d271699495f392506a37af0fd 631 SUPERFAMILY SSF82866 406 605 5.49E-38 T 19-04-2016 ALIDE2_RS22680 7d0f284d271699495f392506a37af0fd 631 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 355 589 8.7E-71 T 19-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ALIDE2_RS22680 7d0f284d271699495f392506a37af0fd 631 Pfam PF13721 SecD export protein N-terminal TM region 1 108 3.1E-36 T 19-04-2016 IPR027398 SecD export protein N-terminal TM domain ALIDE2_RS22680 7d0f284d271699495f392506a37af0fd 631 PANTHER PTHR30081 1 178 4.6E-174 T 19-04-2016 ALIDE2_RS22680 7d0f284d271699495f392506a37af0fd 631 PANTHER PTHR30081 231 289 4.6E-174 T 19-04-2016 ALIDE2_RS22680 7d0f284d271699495f392506a37af0fd 631 PANTHER PTHR30081 322 631 4.6E-174 T 19-04-2016 ALIDE2_RS22680 7d0f284d271699495f392506a37af0fd 631 Gene3D G3DSA:1.20.1640.10 425 607 3.0E-22 T 19-04-2016 ALIDE2_RS21045 1d941e34a905fc46c0ce803008cb45a3 324 PANTHER PTHR10314 9 321 2.0E-76 T 19-04-2016 ALIDE2_RS21045 1d941e34a905fc46c0ce803008cb45a3 324 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 47 61 - T 19-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ALIDE2_RS21045 1d941e34a905fc46c0ce803008cb45a3 324 SUPERFAMILY SSF53686 6 321 4.98E-73 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS21045 1d941e34a905fc46c0ce803008cb45a3 324 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 308 1.4E-57 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS21045 1d941e34a905fc46c0ce803008cb45a3 324 PANTHER PTHR10314:SF17 9 321 2.0E-76 T 19-04-2016 ALIDE2_RS21045 1d941e34a905fc46c0ce803008cb45a3 324 Gene3D G3DSA:3.40.50.1100 77 320 1.1E-45 T 19-04-2016 ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 Gene3D G3DSA:3.40.50.360 329 477 6.7E-25 T 19-04-2016 IPR029039 Flavoprotein-like domain ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 PANTHER PTHR19384:SF76 547 736 6.0E-42 T 19-04-2016 ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 Pfam PF00175 Oxidoreductase NAD-binding domain 607 708 6.9E-11 T 19-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 Pfam PF00258 Flavodoxin 339 458 3.2E-14 T 19-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 606 625 6.2E-8 T 19-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 641 652 6.2E-8 T 19-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 531 541 6.2E-8 T 19-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 548 555 6.2E-8 T 19-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 Pfam PF03929 PepSY-associated TM region 8 318 2.9E-36 T 19-04-2016 IPR005625 PepSY-associated TM protein ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 PANTHER PTHR19384 547 736 6.0E-42 T 19-04-2016 ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 Gene3D G3DSA:3.40.50.80 599 736 9.9E-30 T 19-04-2016 ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 Pfam PF00970 Oxidoreductase FAD-binding domain 533 585 8.1E-5 T 19-04-2016 IPR008333 Oxidoreductase, FAD-binding domain ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 SUPERFAMILY SSF52343 601 736 4.98E-28 T 19-04-2016 ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 SUPERFAMILY SSF52218 334 482 1.28E-30 T 19-04-2016 IPR029039 Flavoprotein-like domain ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 SUPERFAMILY SSF63380 517 599 2.17E-16 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ALIDE2_RS23125 5285c7e6a6accd9a0619af8e8dd16236 736 Gene3D G3DSA:2.40.30.10 527 584 2.0E-11 T 19-04-2016 ALIDE2_RS15900 8a6d8ef21b1a4bfc2f3a9704b963c628 236 Pfam PF09339 IclR helix-turn-helix domain 22 71 2.5E-12 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS15900 8a6d8ef21b1a4bfc2f3a9704b963c628 236 SMART SM00346 20 109 3.1E-15 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS15900 8a6d8ef21b1a4bfc2f3a9704b963c628 236 Pfam PF01614 Bacterial transcriptional regulator 170 222 9.2E-7 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS15900 8a6d8ef21b1a4bfc2f3a9704b963c628 236 Gene3D G3DSA:1.10.10.10 8 80 1.1E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15900 8a6d8ef21b1a4bfc2f3a9704b963c628 236 SUPERFAMILY SSF55781 85 235 9.16E-30 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS15900 8a6d8ef21b1a4bfc2f3a9704b963c628 236 PANTHER PTHR30136 17 236 1.8E-41 T 19-04-2016 ALIDE2_RS15900 8a6d8ef21b1a4bfc2f3a9704b963c628 236 SUPERFAMILY SSF46785 22 92 4.32E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15900 8a6d8ef21b1a4bfc2f3a9704b963c628 236 Gene3D G3DSA:3.30.450.40 85 235 4.6E-33 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS15900 8a6d8ef21b1a4bfc2f3a9704b963c628 236 PANTHER PTHR30136:SF14 17 236 1.8E-41 T 19-04-2016 ALIDE2_RS04325 fbba8f3803db52ccd38af1c00601a9ee 141 PANTHER PTHR22769:SF35 1 109 6.1E-23 T 19-04-2016 ALIDE2_RS04325 fbba8f3803db52ccd38af1c00601a9ee 141 SUPERFAMILY SSF55811 2 109 1.06E-30 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS04325 fbba8f3803db52ccd38af1c00601a9ee 141 PRINTS PR00502 NUDIX hydrolase family signature 49 64 2.0E-9 T 19-04-2016 IPR020476 NUDIX hydrolase ALIDE2_RS04325 fbba8f3803db52ccd38af1c00601a9ee 141 PRINTS PR00502 NUDIX hydrolase family signature 35 49 2.0E-9 T 19-04-2016 IPR020476 NUDIX hydrolase ALIDE2_RS04325 fbba8f3803db52ccd38af1c00601a9ee 141 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 19-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ALIDE2_RS04325 fbba8f3803db52ccd38af1c00601a9ee 141 Gene3D G3DSA:3.90.79.10 5 130 6.8E-28 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS04325 fbba8f3803db52ccd38af1c00601a9ee 141 PANTHER PTHR22769 1 109 6.1E-23 T 19-04-2016 ALIDE2_RS04325 fbba8f3803db52ccd38af1c00601a9ee 141 Pfam PF00293 NUDIX domain 8 98 9.0E-17 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 Pfam PF00672 HAMP domain 315 381 2.1E-10 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 Gene3D G3DSA:3.30.565.10 599 741 2.7E-34 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 638 742 9.3E-16 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 703 713 3.8E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 685 699 3.8E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 714 732 3.8E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 PANTHER PTHR24423 1 7 1.1E-60 T 19-04-2016 ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 PANTHER PTHR24423 397 742 1.1E-60 T 19-04-2016 ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 SMART SM00387 638 758 6.6E-25 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 PIRSF PIRSF037532 5 761 2.7E-202 T 19-04-2016 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 Gene3D G3DSA:3.30.450.20 393 517 1.1E-8 T 19-04-2016 ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 SUPERFAMILY SSF55874 598 742 3.67E-31 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 SUPERFAMILY SSF55785 401 473 1.12E-8 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 SMART SM00091 399 465 7.7E-5 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 SUPERFAMILY SSF47384 522 597 3.34E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 Pfam PF00512 His Kinase A (phospho-acceptor) domain 527 596 1.2E-11 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 SUPERFAMILY SSF158472 335 382 2.88E-7 T 19-04-2016 ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 Pfam PF08448 PAS fold 405 461 2.4E-5 T 19-04-2016 IPR013656 PAS fold-4 ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 SMART SM00388 526 598 9.1E-14 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 Gene3D G3DSA:1.10.287.130 522 594 4.7E-11 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS02075 952828d63721f313a0e7e45c4946d0e5 762 SMART SM00304 333 385 1.2E-7 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 SUPERFAMILY SSF55424 436 559 4.3E-34 T 19-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 SUPERFAMILY SSF51905 98 427 3.24E-52 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 TIGRFAM TIGR02053 MerA: mercury(II) reductase 100 561 2.8E-188 T 19-04-2016 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 PANTHER PTHR22912:SF29 86 549 1.8E-127 T 19-04-2016 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 Gene3D G3DSA:3.50.50.60 241 427 1.7E-51 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 SUPERFAMILY SSF55008 2 68 7.2E-18 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 PANTHER PTHR22912 86 549 1.8E-127 T 19-04-2016 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 Gene3D G3DSA:3.30.390.30 432 549 3.3E-39 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 100 418 1.9E-63 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 437 545 4.5E-30 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 Gene3D G3DSA:3.50.50.60 100 240 2.6E-31 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 133 143 - T 19-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 Pfam PF00403 Heavy-metal-associated domain 3 62 5.0E-11 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 PIRSF PIRSF000350 1 561 3.4E-265 T 19-04-2016 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 19-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 PRINTS PR00945 Mercuric reductase class II signature 13 23 3.0E-91 T 19-04-2016 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 PRINTS PR00945 Mercuric reductase class II signature 469 489 3.0E-91 T 19-04-2016 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 PRINTS PR00945 Mercuric reductase class II signature 272 289 3.0E-91 T 19-04-2016 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 PRINTS PR00945 Mercuric reductase class II signature 145 164 3.0E-91 T 19-04-2016 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 PRINTS PR00945 Mercuric reductase class II signature 534 553 3.0E-91 T 19-04-2016 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 PRINTS PR00945 Mercuric reductase class II signature 237 254 3.0E-91 T 19-04-2016 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 PRINTS PR00945 Mercuric reductase class II signature 292 307 3.0E-91 T 19-04-2016 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 PRINTS PR00945 Mercuric reductase class II signature 110 128 3.0E-91 T 19-04-2016 ALIDE2_RS16745 71687549e0830c5a477a7207c483b902 561 Gene3D G3DSA:3.30.70.100 2 68 4.9E-22 T 19-04-2016 ALIDE2_RS00605 afba5e7dbb6aa6b33bdbc075e9cb39d4 533 SUPERFAMILY SSF52540 201 437 9.19E-72 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00605 afba5e7dbb6aa6b33bdbc075e9cb39d4 533 Pfam PF00158 Sigma-54 interaction domain 202 368 4.4E-67 T 19-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ALIDE2_RS00605 afba5e7dbb6aa6b33bdbc075e9cb39d4 533 PANTHER PTHR32071:SF35 201 531 1.7E-157 T 19-04-2016 ALIDE2_RS00605 afba5e7dbb6aa6b33bdbc075e9cb39d4 533 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 415 424 - T 19-04-2016 IPR025944 Sigma-54 interaction domain, conserved site ALIDE2_RS00605 afba5e7dbb6aa6b33bdbc075e9cb39d4 533 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 288 303 - T 19-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ALIDE2_RS00605 afba5e7dbb6aa6b33bdbc075e9cb39d4 533 Gene3D G3DSA:1.10.10.60 423 531 3.2E-8 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS00605 afba5e7dbb6aa6b33bdbc075e9cb39d4 533 SMART SM00382 222 365 1.0E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS00605 afba5e7dbb6aa6b33bdbc075e9cb39d4 533 PANTHER PTHR32071 201 531 1.7E-157 T 19-04-2016 ALIDE2_RS00605 afba5e7dbb6aa6b33bdbc075e9cb39d4 533 Gene3D G3DSA:3.40.50.300 201 374 1.6E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00605 afba5e7dbb6aa6b33bdbc075e9cb39d4 533 SUPERFAMILY SSF46689 479 531 3.32E-8 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS00605 afba5e7dbb6aa6b33bdbc075e9cb39d4 533 SUPERFAMILY SSF55781 29 176 1.55E-11 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00605 afba5e7dbb6aa6b33bdbc075e9cb39d4 533 Gene3D G3DSA:3.30.450.40 7 175 4.3E-10 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00605 afba5e7dbb6aa6b33bdbc075e9cb39d4 533 Gene3D G3DSA:1.10.8.60 375 422 2.2E-19 T 19-04-2016 ALIDE2_RS00605 afba5e7dbb6aa6b33bdbc075e9cb39d4 533 Pfam PF02954 Bacterial regulatory protein, Fis family 492 523 3.8E-5 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS00605 afba5e7dbb6aa6b33bdbc075e9cb39d4 533 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 226 239 - T 19-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ALIDE2_RS00550 c49679df2d3b88aa5f08c4c6608a245c 333 SUPERFAMILY SSF53850 125 329 4.83E-38 T 19-04-2016 ALIDE2_RS00550 c49679df2d3b88aa5f08c4c6608a245c 333 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 40 98 2.1E-20 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00550 c49679df2d3b88aa5f08c4c6608a245c 333 SUPERFAMILY SSF46785 38 121 4.68E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00550 c49679df2d3b88aa5f08c4c6608a245c 333 PANTHER PTHR30346:SF0 38 326 1.4E-86 T 19-04-2016 ALIDE2_RS00550 c49679df2d3b88aa5f08c4c6608a245c 333 Gene3D G3DSA:3.40.190.10 126 211 4.2E-29 T 19-04-2016 ALIDE2_RS00550 c49679df2d3b88aa5f08c4c6608a245c 333 Pfam PF03466 LysR substrate binding domain 124 324 2.3E-39 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS00550 c49679df2d3b88aa5f08c4c6608a245c 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 76 87 1.1E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00550 c49679df2d3b88aa5f08c4c6608a245c 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 66 76 1.1E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00550 c49679df2d3b88aa5f08c4c6608a245c 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 66 1.1E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00550 c49679df2d3b88aa5f08c4c6608a245c 333 PANTHER PTHR30346 38 326 1.4E-86 T 19-04-2016 ALIDE2_RS00550 c49679df2d3b88aa5f08c4c6608a245c 333 Gene3D G3DSA:3.40.190.10 212 298 1.1E-31 T 19-04-2016 ALIDE2_RS00550 c49679df2d3b88aa5f08c4c6608a245c 333 Gene3D G3DSA:1.10.10.10 38 122 5.2E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01875 aa80818189c197e305adea4eb4bc775c 82 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 19-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site ALIDE2_RS01875 aa80818189c197e305adea4eb4bc775c 82 Pfam PF00137 ATP synthase subunit C 10 72 6.5E-12 T 19-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 ALIDE2_RS01875 aa80818189c197e305adea4eb4bc775c 82 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.9E-6 T 19-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 ALIDE2_RS01875 aa80818189c197e305adea4eb4bc775c 82 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.9E-6 T 19-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 ALIDE2_RS01875 aa80818189c197e305adea4eb4bc775c 82 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.9E-6 T 19-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 ALIDE2_RS01875 aa80818189c197e305adea4eb4bc775c 82 Gene3D G3DSA:1.20.20.10 2 78 7.5E-35 T 19-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 ALIDE2_RS01875 aa80818189c197e305adea4eb4bc775c 82 SUPERFAMILY SSF81333 3 78 1.44E-19 T 19-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 ALIDE2_RS01875 aa80818189c197e305adea4eb4bc775c 82 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 2.1E-24 T 19-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ALIDE2_RS01875 aa80818189c197e305adea4eb4bc775c 82 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 76 14.373 T 19-04-2016 ALIDE2_RS02775 ae494881dc135a56d6cd6a495c366182 137 SMART SM00905 22 133 6.9E-23 T 19-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 ALIDE2_RS02775 ae494881dc135a56d6cd6a495c366182 137 SUPERFAMILY SSF55620 21 132 2.95E-23 T 19-04-2016 ALIDE2_RS02775 ae494881dc135a56d6cd6a495c366182 137 Gene3D G3DSA:3.30.1130.10 22 130 3.6E-26 T 19-04-2016 ALIDE2_RS02775 ae494881dc135a56d6cd6a495c366182 137 Pfam PF02152 Dihydroneopterin aldolase 23 130 3.0E-21 T 19-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 ALIDE2_RS22495 d60965623b281ec77ff6c9e3499b1a65 695 SMART SM00881 8 103 1.6E-32 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS22495 d60965623b281ec77ff6c9e3499b1a65 695 SUPERFAMILY SSF52210 135 297 7.98E-37 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS22495 d60965623b281ec77ff6c9e3499b1a65 695 Gene3D G3DSA:3.40.50.720 8 131 1.5E-34 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22495 d60965623b281ec77ff6c9e3499b1a65 695 Gene3D G3DSA:3.30.1490.20 491 525 6.5E-7 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS22495 d60965623b281ec77ff6c9e3499b1a65 695 Pfam PF13549 ATP-grasp domain 476 692 1.3E-51 T 19-04-2016 ALIDE2_RS22495 d60965623b281ec77ff6c9e3499b1a65 695 SUPERFAMILY SSF51735 5 140 6.75E-34 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22495 d60965623b281ec77ff6c9e3499b1a65 695 SUPERFAMILY SSF52210 302 453 4.19E-25 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS22495 d60965623b281ec77ff6c9e3499b1a65 695 PANTHER PTHR33303 9 437 5.5E-146 T 19-04-2016 ALIDE2_RS22495 d60965623b281ec77ff6c9e3499b1a65 695 PANTHER PTHR33303 455 691 5.5E-146 T 19-04-2016 ALIDE2_RS22495 d60965623b281ec77ff6c9e3499b1a65 695 SUPERFAMILY SSF56059 480 692 1.67E-31 T 19-04-2016 ALIDE2_RS22495 d60965623b281ec77ff6c9e3499b1a65 695 Pfam PF13380 CoA binding domain 12 135 1.5E-21 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS22495 d60965623b281ec77ff6c9e3499b1a65 695 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 159 295 3.2E-38 T 19-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain ALIDE2_RS22495 d60965623b281ec77ff6c9e3499b1a65 695 Gene3D G3DSA:3.40.50.261 132 293 8.9E-25 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS22495 d60965623b281ec77ff6c9e3499b1a65 695 PANTHER PTHR33303:SF3 9 437 5.5E-146 T 19-04-2016 ALIDE2_RS22495 d60965623b281ec77ff6c9e3499b1a65 695 PANTHER PTHR33303:SF3 455 691 5.5E-146 T 19-04-2016 ALIDE2_RS11795 29d416a0b0dc8f488953fb5aa2862ee8 82 PANTHER PTHR11014:SF63 2 82 2.1E-15 T 19-04-2016 ALIDE2_RS11795 29d416a0b0dc8f488953fb5aa2862ee8 82 PANTHER PTHR11014 2 82 2.1E-15 T 19-04-2016 ALIDE2_RS11795 29d416a0b0dc8f488953fb5aa2862ee8 82 SUPERFAMILY SSF53187 3 81 3.63E-14 T 19-04-2016 ALIDE2_RS11795 29d416a0b0dc8f488953fb5aa2862ee8 82 Gene3D G3DSA:3.40.630.10 2 81 2.8E-19 T 19-04-2016 ALIDE2_RS13220 c31321caba91ef651605677ca5732220 294 SUPERFAMILY SSF51182 14 292 1.03E-79 T 19-04-2016 IPR011051 RmlC-like cupin domain ALIDE2_RS13220 c31321caba91ef651605677ca5732220 294 Pfam PF02678 Pirin 34 133 5.3E-32 T 19-04-2016 IPR003829 Pirin, N-terminal domain ALIDE2_RS13220 c31321caba91ef651605677ca5732220 294 Gene3D G3DSA:2.60.120.10 11 263 2.1E-76 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS13220 c31321caba91ef651605677ca5732220 294 PIRSF PIRSF006232 6 294 2.5E-85 T 19-04-2016 IPR012093 Pirin ALIDE2_RS13220 c31321caba91ef651605677ca5732220 294 PANTHER PTHR13903:SF12 1 290 6.8E-154 T 19-04-2016 ALIDE2_RS13220 c31321caba91ef651605677ca5732220 294 PANTHER PTHR13903 1 290 6.8E-154 T 19-04-2016 IPR012093 Pirin ALIDE2_RS13220 c31321caba91ef651605677ca5732220 294 Pfam PF05726 Pirin C-terminal cupin domain 188 290 2.0E-28 T 19-04-2016 IPR008778 Pirin, C-terminal domain ALIDE2_RS12450 d0c919f75b7dc344bb63948e7fc968c0 346 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 257 2.8E-19 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS12450 d0c919f75b7dc344bb63948e7fc968c0 346 PANTHER PTHR30469:SF15 29 344 6.1E-55 T 19-04-2016 ALIDE2_RS12450 d0c919f75b7dc344bb63948e7fc968c0 346 PANTHER PTHR30469 29 344 6.1E-55 T 19-04-2016 ALIDE2_RS12450 d0c919f75b7dc344bb63948e7fc968c0 346 SUPERFAMILY SSF111369 45 272 1.7E-21 T 19-04-2016 ALIDE2_RS12450 d0c919f75b7dc344bb63948e7fc968c0 346 Gene3D G3DSA:2.40.50.100 160 191 1.3E-12 T 19-04-2016 ALIDE2_RS12450 d0c919f75b7dc344bb63948e7fc968c0 346 Gene3D G3DSA:2.40.50.100 55 85 1.3E-12 T 19-04-2016 ALIDE2_RS12450 d0c919f75b7dc344bb63948e7fc968c0 346 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 341 1.1E-52 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ALIDE2_RS02590 934d472ebfb83b134ae92e7959cd7296 297 Pfam PF04909 Amidohydrolase 24 294 7.3E-32 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 ALIDE2_RS02590 934d472ebfb83b134ae92e7959cd7296 297 PANTHER PTHR35563:SF1 1 296 1.0E-57 T 19-04-2016 ALIDE2_RS02590 934d472ebfb83b134ae92e7959cd7296 297 PANTHER PTHR35563 1 296 1.0E-57 T 19-04-2016 ALIDE2_RS02590 934d472ebfb83b134ae92e7959cd7296 297 Gene3D G3DSA:3.20.20.140 3 295 8.9E-77 T 19-04-2016 ALIDE2_RS02590 934d472ebfb83b134ae92e7959cd7296 297 SUPERFAMILY SSF51556 19 294 2.24E-59 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS03580 c5a7edf1aff7d5d63f77c2461a2b019c 401 SUPERFAMILY SSF50621 267 401 6.91E-33 T 19-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 ALIDE2_RS03580 c5a7edf1aff7d5d63f77c2461a2b019c 401 PANTHER PTHR11482 329 383 5.0E-81 T 19-04-2016 ALIDE2_RS03580 c5a7edf1aff7d5d63f77c2461a2b019c 401 PANTHER PTHR11482 1 313 5.0E-81 T 19-04-2016 ALIDE2_RS03580 c5a7edf1aff7d5d63f77c2461a2b019c 401 TIGRFAM TIGR03099 dCO2ase_PEP1: pyridoxal-dependent decarboxylase, exosortase A system-associated 4 401 6.2E-183 T 19-04-2016 IPR017530 Pyridoxal-dependent decarboxylase, exosortase system type 1 associated ALIDE2_RS03580 c5a7edf1aff7d5d63f77c2461a2b019c 401 SUPERFAMILY SSF51419 27 286 1.89E-61 T 19-04-2016 IPR029066 PLP-binding barrel ALIDE2_RS03580 c5a7edf1aff7d5d63f77c2461a2b019c 401 Gene3D G3DSA:2.40.37.10 270 401 2.2E-31 T 19-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 ALIDE2_RS03580 c5a7edf1aff7d5d63f77c2461a2b019c 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 274 293 9.1E-10 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 ALIDE2_RS03580 c5a7edf1aff7d5d63f77c2461a2b019c 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 9.1E-10 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 ALIDE2_RS03580 c5a7edf1aff7d5d63f77c2461a2b019c 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 9.1E-10 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 ALIDE2_RS03580 c5a7edf1aff7d5d63f77c2461a2b019c 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 187 200 9.1E-10 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 ALIDE2_RS03580 c5a7edf1aff7d5d63f77c2461a2b019c 401 Gene3D G3DSA:3.20.20.10 38 269 2.6E-63 T 19-04-2016 IPR029066 PLP-binding barrel ALIDE2_RS03580 c5a7edf1aff7d5d63f77c2461a2b019c 401 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 45 284 2.3E-32 T 19-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 ALIDE2_RS03580 c5a7edf1aff7d5d63f77c2461a2b019c 401 PANTHER PTHR11482:SF5 329 383 5.0E-81 T 19-04-2016 ALIDE2_RS03580 c5a7edf1aff7d5d63f77c2461a2b019c 401 PANTHER PTHR11482:SF5 1 313 5.0E-81 T 19-04-2016 ALIDE2_RS03580 c5a7edf1aff7d5d63f77c2461a2b019c 401 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 290 400 1.9E-13 T 19-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 ALIDE2_RS02795 4c09796650d8960f7b8878bfeba74524 64 Pfam PF11146 Protein of unknown function (DUF2905) 3 63 4.1E-19 T 19-04-2016 IPR021320 Protein of unknown function DUF2905 ALIDE2_RS02710 bf2d7aba3696dee4c907e25886d78d80 493 SUPERFAMILY SSF50494 261 481 5.79E-20 T 19-04-2016 IPR009003 Peptidase S1, PA clan ALIDE2_RS02710 bf2d7aba3696dee4c907e25886d78d80 493 Gene3D G3DSA:2.40.10.10 282 402 8.6E-28 T 19-04-2016 ALIDE2_RS21340 a189a9a04854edfce833aa8fd5836498 250 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 144 154 - T 19-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 ALIDE2_RS21340 a189a9a04854edfce833aa8fd5836498 250 PANTHER PTHR31126 112 247 2.0E-58 T 19-04-2016 ALIDE2_RS21340 a189a9a04854edfce833aa8fd5836498 250 PANTHER PTHR31126 5 86 2.0E-58 T 19-04-2016 ALIDE2_RS21340 a189a9a04854edfce833aa8fd5836498 250 SUPERFAMILY SSF52799 8 245 1.41E-53 T 19-04-2016 IPR029021 Protein-tyrosine phosphatase-like ALIDE2_RS21340 a189a9a04854edfce833aa8fd5836498 250 Gene3D G3DSA:3.90.190.10 12 180 1.1E-19 T 19-04-2016 IPR029021 Protein-tyrosine phosphatase-like ALIDE2_RS21340 a189a9a04854edfce833aa8fd5836498 250 Pfam PF13350 Tyrosine phosphatase family 9 245 6.9E-68 T 19-04-2016 IPR026893 Tyrosine/serine-protein phosphatase IphP-type ALIDE2_RS21340 a189a9a04854edfce833aa8fd5836498 250 PANTHER PTHR31126:SF21 112 247 2.0E-58 T 19-04-2016 ALIDE2_RS21340 a189a9a04854edfce833aa8fd5836498 250 PANTHER PTHR31126:SF21 5 86 2.0E-58 T 19-04-2016 ALIDE2_RS02150 81adef712d4c2eaf0f44d00867d97a6c 154 SUPERFAMILY SSF57783 14 88 3.06E-10 T 19-04-2016 ALIDE2_RS02150 81adef712d4c2eaf0f44d00867d97a6c 154 Gene3D G3DSA:3.90.580.10 15 86 1.0E-10 T 19-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ALIDE2_RS02150 81adef712d4c2eaf0f44d00867d97a6c 154 Pfam PF01807 CHC2 zinc finger 24 85 4.8E-6 T 19-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ALIDE2_RS02150 81adef712d4c2eaf0f44d00867d97a6c 154 SMART SM00400 34 85 0.009 T 19-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ALIDE2_RS20015 4cccc7568790f15b37d2f7a0e8b1dec7 468 SMART SM00646 298 453 9.1E-61 T 19-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 ALIDE2_RS20015 4cccc7568790f15b37d2f7a0e8b1dec7 468 SUPERFAMILY SSF53187 380 456 4.39E-53 T 19-04-2016 ALIDE2_RS20015 4cccc7568790f15b37d2f7a0e8b1dec7 468 SUPERFAMILY SSF53187 233 332 4.39E-53 T 19-04-2016 ALIDE2_RS20015 4cccc7568790f15b37d2f7a0e8b1dec7 468 Gene3D G3DSA:3.40.630.40 381 456 1.8E-56 T 19-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 ALIDE2_RS20015 4cccc7568790f15b37d2f7a0e8b1dec7 468 Gene3D G3DSA:3.40.630.40 233 333 1.8E-56 T 19-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 ALIDE2_RS20015 4cccc7568790f15b37d2f7a0e8b1dec7 468 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 234 453 4.6E-47 T 19-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 ALIDE2_RS20015 4cccc7568790f15b37d2f7a0e8b1dec7 468 PANTHER PTHR30404 221 461 2.2E-99 T 19-04-2016 ALIDE2_RS20015 4cccc7568790f15b37d2f7a0e8b1dec7 468 PANTHER PTHR30404 37 185 2.2E-99 T 19-04-2016 ALIDE2_RS20015 4cccc7568790f15b37d2f7a0e8b1dec7 468 Pfam PF11741 AMIN domain 40 143 1.1E-20 T 19-04-2016 IPR021731 AMIN domain ALIDE2_RS20015 4cccc7568790f15b37d2f7a0e8b1dec7 468 PANTHER PTHR30404:SF0 221 461 2.2E-99 T 19-04-2016 ALIDE2_RS20015 4cccc7568790f15b37d2f7a0e8b1dec7 468 PANTHER PTHR30404:SF0 37 185 2.2E-99 T 19-04-2016 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 Gene3D G3DSA:3.40.120.10 247 353 5.0E-40 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 19-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 SUPERFAMILY SSF53738 150 250 4.32E-31 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 9.1E-25 T 19-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 166 185 9.1E-25 T 19-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 200 213 9.1E-25 T 19-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 229 244 9.1E-25 T 19-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 249 1.4E-26 T 19-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 Gene3D G3DSA:3.40.120.10 168 245 1.7E-32 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 Gene3D G3DSA:3.30.310.50 365 455 4.9E-27 T 19-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 134 7.7E-36 T 19-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 PANTHER PTHR22573:SF28 7 458 3.9E-175 T 19-04-2016 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 368 448 7.2E-12 T 19-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 254 357 9.5E-20 T 19-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 SUPERFAMILY SSF55957 364 454 1.06E-19 T 19-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 SUPERFAMILY SSF53738 5 129 8.24E-38 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 PANTHER PTHR22573 7 458 3.9E-175 T 19-04-2016 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 Gene3D G3DSA:3.40.120.10 5 128 1.9E-33 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS14450 490bf00be90e1f50163f99ddcba68302 462 SUPERFAMILY SSF53738 254 350 6.67E-30 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ALIDE2_RS19545 d055032e1aa13761aaaae4da6d8ea5ca 287 PANTHER PTHR21631:SF12 1 253 2.0E-88 T 19-04-2016 ALIDE2_RS19545 d055032e1aa13761aaaae4da6d8ea5ca 287 Pfam PF13714 Phosphoenolpyruvate phosphomutase 7 248 1.2E-54 T 19-04-2016 ALIDE2_RS19545 d055032e1aa13761aaaae4da6d8ea5ca 287 ProSitePatterns PS00161 Isocitrate lyase signature. 116 121 - T 19-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 ALIDE2_RS19545 d055032e1aa13761aaaae4da6d8ea5ca 287 SUPERFAMILY SSF51621 3 283 1.03E-87 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS19545 d055032e1aa13761aaaae4da6d8ea5ca 287 Gene3D G3DSA:3.20.20.60 2 257 8.2E-87 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS19545 d055032e1aa13761aaaae4da6d8ea5ca 287 PANTHER PTHR21631 1 253 2.0E-88 T 19-04-2016 ALIDE2_RS01565 7840ec75a73f3888f3c6df2fd4036a65 232 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 21 200 1.2E-52 T 19-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS01565 7840ec75a73f3888f3c6df2fd4036a65 232 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 232 31.449 T 19-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS01565 7840ec75a73f3888f3c6df2fd4036a65 232 SUPERFAMILY SSF53271 14 209 8.09E-42 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS01565 7840ec75a73f3888f3c6df2fd4036a65 232 PANTHER PTHR19278:SF36 16 231 2.3E-93 T 19-04-2016 ALIDE2_RS01565 7840ec75a73f3888f3c6df2fd4036a65 232 Gene3D G3DSA:3.40.50.2020 17 229 9.8E-75 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS01565 7840ec75a73f3888f3c6df2fd4036a65 232 PANTHER PTHR19278 16 231 2.3E-93 T 19-04-2016 ALIDE2_RS01565 7840ec75a73f3888f3c6df2fd4036a65 232 Pfam PF00156 Phosphoribosyl transferase domain 51 171 3.1E-13 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 ALIDE2_RS08540 a9635eb9749c31125eb59ede19c4646e 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 286 297 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS08540 a9635eb9749c31125eb59ede19c4646e 489 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 481 1.9E-201 T 19-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 ALIDE2_RS08540 a9635eb9749c31125eb59ede19c4646e 489 PANTHER PTHR11699:SF49 1 484 1.6E-272 T 19-04-2016 ALIDE2_RS08540 a9635eb9749c31125eb59ede19c4646e 489 Pfam PF00171 Aldehyde dehydrogenase family 21 483 1.8E-168 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS08540 a9635eb9749c31125eb59ede19c4646e 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS08540 a9635eb9749c31125eb59ede19c4646e 489 SUPERFAMILY SSF53720 10 485 2.49E-168 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS08540 a9635eb9749c31125eb59ede19c4646e 489 Gene3D G3DSA:3.40.605.10 14 272 3.6E-99 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS08540 a9635eb9749c31125eb59ede19c4646e 489 Gene3D G3DSA:3.40.309.10 273 458 1.0E-69 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS08540 a9635eb9749c31125eb59ede19c4646e 489 PANTHER PTHR11699 1 484 1.6E-272 T 19-04-2016 ALIDE2_RS07900 a7e2027c67bcc80e7bf3a0ed987e75d8 314 Gene3D G3DSA:3.40.190.10 90 175 2.8E-19 T 19-04-2016 ALIDE2_RS07900 a7e2027c67bcc80e7bf3a0ed987e75d8 314 PANTHER PTHR30346 1 303 2.6E-82 T 19-04-2016 ALIDE2_RS07900 a7e2027c67bcc80e7bf3a0ed987e75d8 314 Gene3D G3DSA:3.40.190.10 176 261 6.2E-17 T 19-04-2016 ALIDE2_RS07900 a7e2027c67bcc80e7bf3a0ed987e75d8 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.8E-21 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS07900 a7e2027c67bcc80e7bf3a0ed987e75d8 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS07900 a7e2027c67bcc80e7bf3a0ed987e75d8 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS07900 a7e2027c67bcc80e7bf3a0ed987e75d8 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS07900 a7e2027c67bcc80e7bf3a0ed987e75d8 314 Gene3D G3DSA:1.10.10.10 1 85 1.2E-29 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07900 a7e2027c67bcc80e7bf3a0ed987e75d8 314 SUPERFAMILY SSF53850 91 291 4.65E-31 T 19-04-2016 ALIDE2_RS07900 a7e2027c67bcc80e7bf3a0ed987e75d8 314 SUPERFAMILY SSF46785 1 86 2.86E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07900 a7e2027c67bcc80e7bf3a0ed987e75d8 314 Pfam PF03466 LysR substrate binding domain 87 291 2.9E-33 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS20110 e6aefb98759dd92faf25ae27c8fbd46b 322 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 15 314 8.1E-97 T 19-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS20110 e6aefb98759dd92faf25ae27c8fbd46b 322 Gene3D G3DSA:3.30.1490.20 119 184 4.1E-20 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS20110 e6aefb98759dd92faf25ae27c8fbd46b 322 Gene3D G3DSA:3.40.50.20 15 95 7.2E-28 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS20110 e6aefb98759dd92faf25ae27c8fbd46b 322 Pfam PF07478 D-ala D-ala ligase C-terminus 115 311 1.8E-55 T 19-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS20110 e6aefb98759dd92faf25ae27c8fbd46b 322 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 14 315 33.819 T 19-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS20110 e6aefb98759dd92faf25ae27c8fbd46b 322 SUPERFAMILY SSF52440 15 107 1.53E-28 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS20110 e6aefb98759dd92faf25ae27c8fbd46b 322 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 256 285 - T 19-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS20110 e6aefb98759dd92faf25ae27c8fbd46b 322 SUPERFAMILY SSF56059 107 320 2.3E-56 T 19-04-2016 ALIDE2_RS20110 e6aefb98759dd92faf25ae27c8fbd46b 322 Pfam PF01820 D-ala D-ala ligase N-terminus 15 96 1.4E-20 T 19-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS20110 e6aefb98759dd92faf25ae27c8fbd46b 322 Gene3D G3DSA:3.30.470.20 96 114 3.3E-47 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS20110 e6aefb98759dd92faf25ae27c8fbd46b 322 Gene3D G3DSA:3.30.470.20 185 314 3.3E-47 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS20110 e6aefb98759dd92faf25ae27c8fbd46b 322 PANTHER PTHR23132 15 314 1.3E-91 T 19-04-2016 ALIDE2_RS20110 e6aefb98759dd92faf25ae27c8fbd46b 322 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 74 85 - T 19-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS17845 d50c130affbc7c4544bf852928ca6136 520 SMART SM00155 168 195 0.018 T 19-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 ALIDE2_RS17845 d50c130affbc7c4544bf852928ca6136 520 SMART SM00155 411 438 1.2E-5 T 19-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 ALIDE2_RS17845 d50c130affbc7c4544bf852928ca6136 520 SUPERFAMILY SSF56024 283 466 4.49E-36 T 19-04-2016 ALIDE2_RS17845 d50c130affbc7c4544bf852928ca6136 520 Pfam PF13091 PLD-like domain 82 227 8.7E-14 T 19-04-2016 IPR025202 Phospholipase D-like domain ALIDE2_RS17845 d50c130affbc7c4544bf852928ca6136 520 Pfam PF13091 PLD-like domain 323 464 1.9E-21 T 19-04-2016 IPR025202 Phospholipase D-like domain ALIDE2_RS17845 d50c130affbc7c4544bf852928ca6136 520 Gene3D G3DSA:3.30.870.10 265 483 3.2E-48 T 19-04-2016 ALIDE2_RS17845 d50c130affbc7c4544bf852928ca6136 520 Gene3D G3DSA:3.30.870.10 39 234 2.3E-40 T 19-04-2016 ALIDE2_RS17845 d50c130affbc7c4544bf852928ca6136 520 PANTHER PTHR21248 412 483 7.0E-157 T 19-04-2016 ALIDE2_RS17845 d50c130affbc7c4544bf852928ca6136 520 PANTHER PTHR21248 14 392 7.0E-157 T 19-04-2016 ALIDE2_RS17845 d50c130affbc7c4544bf852928ca6136 520 PANTHER PTHR21248:SF12 412 483 7.0E-157 T 19-04-2016 ALIDE2_RS17845 d50c130affbc7c4544bf852928ca6136 520 PANTHER PTHR21248:SF12 14 392 7.0E-157 T 19-04-2016 ALIDE2_RS17845 d50c130affbc7c4544bf852928ca6136 520 SUPERFAMILY SSF56024 50 244 4.19E-41 T 19-04-2016 ALIDE2_RS03885 48c027a61712128aeb36a4613c275868 300 Pfam PF03466 LysR substrate binding domain 90 292 4.0E-46 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS03885 48c027a61712128aeb36a4613c275868 300 Gene3D G3DSA:1.10.10.10 1 80 1.6E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS03885 48c027a61712128aeb36a4613c275868 300 PANTHER PTHR30419 1 286 4.0E-91 T 19-04-2016 ALIDE2_RS03885 48c027a61712128aeb36a4613c275868 300 SUPERFAMILY SSF46785 4 87 2.13E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS03885 48c027a61712128aeb36a4613c275868 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.16E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS03885 48c027a61712128aeb36a4613c275868 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.16E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS03885 48c027a61712128aeb36a4613c275868 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.16E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS03885 48c027a61712128aeb36a4613c275868 300 PANTHER PTHR30419:SF0 1 286 4.0E-91 T 19-04-2016 ALIDE2_RS03885 48c027a61712128aeb36a4613c275868 300 Gene3D G3DSA:3.40.190.10 178 263 1.0E-22 T 19-04-2016 ALIDE2_RS03885 48c027a61712128aeb36a4613c275868 300 Gene3D G3DSA:3.40.190.10 93 177 1.6E-18 T 19-04-2016 ALIDE2_RS03885 48c027a61712128aeb36a4613c275868 300 SUPERFAMILY SSF53850 92 298 1.26E-45 T 19-04-2016 ALIDE2_RS03885 48c027a61712128aeb36a4613c275868 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.9E-20 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12540 a0b6d45c665884e5274d88792461a811 320 SUPERFAMILY SSF53850 86 281 7.24E-15 T 19-04-2016 ALIDE2_RS12540 a0b6d45c665884e5274d88792461a811 320 PANTHER PTHR30349 1 311 2.0E-79 T 19-04-2016 ALIDE2_RS12540 a0b6d45c665884e5274d88792461a811 320 PIRSF PIRSF017082 1 318 3.5E-85 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12540 a0b6d45c665884e5274d88792461a811 320 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 315 2.4E-75 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12540 a0b6d45c665884e5274d88792461a811 320 PANTHER PTHR30349:SF16 1 311 2.0E-79 T 19-04-2016 ALIDE2_RS23060 fc3d488f86a12e8d3a3585af547a4b0f 397 Pfam PF02515 CoA-transferase family III 5 367 1.9E-119 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS23060 fc3d488f86a12e8d3a3585af547a4b0f 397 SUPERFAMILY SSF89796 4 390 2.09E-128 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS23060 fc3d488f86a12e8d3a3585af547a4b0f 397 Gene3D G3DSA:3.30.1540.10 224 305 1.9E-27 T 19-04-2016 ALIDE2_RS23060 fc3d488f86a12e8d3a3585af547a4b0f 397 PANTHER PTHR24023:SF593 77 208 1.7E-25 T 19-04-2016 ALIDE2_RS23060 fc3d488f86a12e8d3a3585af547a4b0f 397 PANTHER PTHR24023 77 208 1.7E-25 T 19-04-2016 ALIDE2_RS23060 fc3d488f86a12e8d3a3585af547a4b0f 397 Gene3D G3DSA:3.40.50.10540 4 217 7.8E-108 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS23060 fc3d488f86a12e8d3a3585af547a4b0f 397 Gene3D G3DSA:3.40.50.10540 306 390 7.8E-108 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS21125 5def31c4d3a465c6550b3610758fd206 702 Gene3D G3DSA:3.40.50.300 411 600 1.1E-24 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21125 5def31c4d3a465c6550b3610758fd206 702 PANTHER PTHR30580 1 702 2.6E-179 T 19-04-2016 ALIDE2_RS21125 5def31c4d3a465c6550b3610758fd206 702 Pfam PF00271 Helicase conserved C-terminal domain 465 547 9.9E-6 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS21125 5def31c4d3a465c6550b3610758fd206 702 Hamap MF_00983 Probable primosomal protein N' [priA]. 15 702 21.075 T 19-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 ALIDE2_RS21125 5def31c4d3a465c6550b3610758fd206 702 Gene3D G3DSA:3.40.50.300 144 315 9.7E-29 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21125 5def31c4d3a465c6550b3610758fd206 702 SMART SM00490 444 549 5.7E-4 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS21125 5def31c4d3a465c6550b3610758fd206 702 Pfam PF00270 DEAD/DEAH box helicase 151 310 4.2E-12 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ALIDE2_RS21125 5def31c4d3a465c6550b3610758fd206 702 SMART SM00487 141 344 2.6E-15 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS21125 5def31c4d3a465c6550b3610758fd206 702 SUPERFAMILY SSF52540 463 550 4.14E-32 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21125 5def31c4d3a465c6550b3610758fd206 702 SUPERFAMILY SSF52540 159 392 4.14E-32 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21125 5def31c4d3a465c6550b3610758fd206 702 TIGRFAM TIGR00595 priA: primosomal protein N' 164 699 8.1E-152 T 19-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 ALIDE2_RS12890 a67479e6156a01dc6f7e70130c3d7961 125 SUPERFAMILY SSF50022 1 106 1.26E-33 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ALIDE2_RS12890 a67479e6156a01dc6f7e70130c3d7961 125 PANTHER PTHR21496 1 100 1.1E-19 T 19-04-2016 ALIDE2_RS12890 a67479e6156a01dc6f7e70130c3d7961 125 Pfam PF00355 Rieske [2Fe-2S] domain 3 81 2.9E-14 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ALIDE2_RS12890 a67479e6156a01dc6f7e70130c3d7961 125 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 101 8.5E-25 T 19-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 ALIDE2_RS12890 a67479e6156a01dc6f7e70130c3d7961 125 Gene3D G3DSA:2.102.10.10 2 105 8.7E-29 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ALIDE2_RS03285 00e66a0d1e13df59887be756370f0b78 235 SUPERFAMILY SSF50685 93 178 3.35E-11 T 19-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain ALIDE2_RS03285 00e66a0d1e13df59887be756370f0b78 235 Pfam PF03330 Lytic transglycolase 91 179 8.1E-25 T 19-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain ALIDE2_RS03285 00e66a0d1e13df59887be756370f0b78 235 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 93 184 3.8E-38 T 19-04-2016 IPR012997 Rare lipoprotein A ALIDE2_RS03285 00e66a0d1e13df59887be756370f0b78 235 PANTHER PTHR34183:SF2 92 189 2.0E-45 T 19-04-2016 ALIDE2_RS03285 00e66a0d1e13df59887be756370f0b78 235 PANTHER PTHR34183 92 189 2.0E-45 T 19-04-2016 ALIDE2_RS13075 0f6740dbf912c739a3d124f57d832f92 169 Pfam PF02600 Disulfide bond formation protein DsbB 11 159 3.6E-39 T 19-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 ALIDE2_RS13075 0f6740dbf912c739a3d124f57d832f92 169 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 6 167 20.584 T 19-04-2016 IPR022920 Disulphide bond formation protein DsbB ALIDE2_RS13075 0f6740dbf912c739a3d124f57d832f92 169 Gene3D G3DSA:1.20.1550.10 10 167 1.0E-45 T 19-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain ALIDE2_RS13075 0f6740dbf912c739a3d124f57d832f92 169 SUPERFAMILY SSF158442 15 160 5.89E-39 T 19-04-2016 ALIDE2_RS13075 0f6740dbf912c739a3d124f57d832f92 169 PANTHER PTHR36570 1 169 8.3E-26 T 19-04-2016 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 PANTHER PTHR32063 2 1042 0.0 T 19-04-2016 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 PANTHER PTHR32063:SF19 2 1042 0.0 T 19-04-2016 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 SUPERFAMILY SSF82693 137 182 5.23E-18 T 19-04-2016 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 SUPERFAMILY SSF82693 268 325 5.23E-18 T 19-04-2016 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 Gene3D G3DSA:3.30.70.1430 46 142 6.4E-24 T 19-04-2016 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1037 0.0 T 19-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 SUPERFAMILY SSF82714 185 265 1.96E-16 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 Pfam PF00873 AcrB/AcrD/AcrF family 11 1034 3.3E-239 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 Gene3D G3DSA:3.30.2090.10 716 802 5.3E-18 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 SUPERFAMILY SSF82693 46 129 3.4E-20 T 19-04-2016 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 SUPERFAMILY SSF82714 716 799 5.75E-17 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 SUPERFAMILY SSF82866 800 1035 2.35E-51 T 19-04-2016 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 Gene3D G3DSA:3.30.2090.10 184 264 5.8E-18 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 SUPERFAMILY SSF82866 291 497 5.89E-43 T 19-04-2016 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.6E-29 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.6E-29 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.6E-29 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 1.6E-29 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.6E-29 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 1.6E-29 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.6E-29 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 Gene3D G3DSA:1.10.3850.10 806 1034 7.4E-58 T 19-04-2016 ALIDE2_RS16790 8becec8f7b156b85caaba706e62f9aa0 1043 Gene3D G3DSA:1.10.3850.10 273 499 9.2E-72 T 19-04-2016 ALIDE2_RS17685 c12cad9367cb99d8e855e1dfd972d7a9 357 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 336 3.0E-39 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS17685 c12cad9367cb99d8e855e1dfd972d7a9 357 PANTHER PTHR32196 22 351 1.2E-67 T 19-04-2016 ALIDE2_RS17685 c12cad9367cb99d8e855e1dfd972d7a9 357 PANTHER PTHR32196:SF22 22 351 1.2E-67 T 19-04-2016 ALIDE2_RS20860 8827bb07c550ce4bcce1d877911b7503 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 103 15.099 T 19-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ALIDE2_RS20860 8827bb07c550ce4bcce1d877911b7503 103 PANTHER PTHR34653 21 103 1.9E-18 T 19-04-2016 ALIDE2_RS20860 8827bb07c550ce4bcce1d877911b7503 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 24 103 1.2E-18 T 19-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ALIDE2_RS20860 8827bb07c550ce4bcce1d877911b7503 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 1.3E-10 T 19-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ALIDE2_RS20860 8827bb07c550ce4bcce1d877911b7503 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 1.3E-10 T 19-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ALIDE2_RS20860 8827bb07c550ce4bcce1d877911b7503 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 1.3E-10 T 19-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ALIDE2_RS20860 8827bb07c550ce4bcce1d877911b7503 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 20 103 2.1E-25 T 19-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ALIDE2_RS17605 968ad5bc095de163e4c4587c87db0453 324 PANTHER PTHR30465:SF0 1 320 2.8E-103 T 19-04-2016 ALIDE2_RS17605 968ad5bc095de163e4c4587c87db0453 324 SUPERFAMILY SSF161098 90 306 7.52E-21 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17605 968ad5bc095de163e4c4587c87db0453 324 PANTHER PTHR30465 1 320 2.8E-103 T 19-04-2016 ALIDE2_RS17605 968ad5bc095de163e4c4587c87db0453 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 9.3E-42 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17605 968ad5bc095de163e4c4587c87db0453 324 Gene3D G3DSA:1.10.3720.10 89 316 1.3E-21 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS13760 fa2740e7be15c10e41d8e7d87db3d4f6 376 PANTHER PTHR30347:SF1 3 349 1.9E-64 T 19-04-2016 ALIDE2_RS13760 fa2740e7be15c10e41d8e7d87db3d4f6 376 Pfam PF13358 DDE superfamily endonuclease 182 328 8.2E-29 T 19-04-2016 ALIDE2_RS13760 fa2740e7be15c10e41d8e7d87db3d4f6 376 Gene3D G3DSA:3.30.420.10 217 343 6.7E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS13760 fa2740e7be15c10e41d8e7d87db3d4f6 376 Pfam PF13565 Homeodomain-like domain 62 141 2.6E-13 T 19-04-2016 ALIDE2_RS13760 fa2740e7be15c10e41d8e7d87db3d4f6 376 PANTHER PTHR30347 3 349 1.9E-64 T 19-04-2016 ALIDE2_RS13760 fa2740e7be15c10e41d8e7d87db3d4f6 376 SUPERFAMILY SSF46689 28 142 5.02E-17 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS21355 fa2740e7be15c10e41d8e7d87db3d4f6 376 PANTHER PTHR30347:SF1 3 349 1.9E-64 T 19-04-2016 ALIDE2_RS21355 fa2740e7be15c10e41d8e7d87db3d4f6 376 Pfam PF13358 DDE superfamily endonuclease 182 328 8.2E-29 T 19-04-2016 ALIDE2_RS21355 fa2740e7be15c10e41d8e7d87db3d4f6 376 Gene3D G3DSA:3.30.420.10 217 343 6.7E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS21355 fa2740e7be15c10e41d8e7d87db3d4f6 376 Pfam PF13565 Homeodomain-like domain 62 141 2.6E-13 T 19-04-2016 ALIDE2_RS21355 fa2740e7be15c10e41d8e7d87db3d4f6 376 PANTHER PTHR30347 3 349 1.9E-64 T 19-04-2016 ALIDE2_RS21355 fa2740e7be15c10e41d8e7d87db3d4f6 376 SUPERFAMILY SSF46689 28 142 5.02E-17 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS03105 fa2740e7be15c10e41d8e7d87db3d4f6 376 PANTHER PTHR30347:SF1 3 349 1.9E-64 T 19-04-2016 ALIDE2_RS03105 fa2740e7be15c10e41d8e7d87db3d4f6 376 Pfam PF13358 DDE superfamily endonuclease 182 328 8.2E-29 T 19-04-2016 ALIDE2_RS03105 fa2740e7be15c10e41d8e7d87db3d4f6 376 Gene3D G3DSA:3.30.420.10 217 343 6.7E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS03105 fa2740e7be15c10e41d8e7d87db3d4f6 376 Pfam PF13565 Homeodomain-like domain 62 141 2.6E-13 T 19-04-2016 ALIDE2_RS03105 fa2740e7be15c10e41d8e7d87db3d4f6 376 PANTHER PTHR30347 3 349 1.9E-64 T 19-04-2016 ALIDE2_RS03105 fa2740e7be15c10e41d8e7d87db3d4f6 376 SUPERFAMILY SSF46689 28 142 5.02E-17 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS02180 fa2740e7be15c10e41d8e7d87db3d4f6 376 PANTHER PTHR30347:SF1 3 349 1.9E-64 T 19-04-2016 ALIDE2_RS02180 fa2740e7be15c10e41d8e7d87db3d4f6 376 Pfam PF13358 DDE superfamily endonuclease 182 328 8.2E-29 T 19-04-2016 ALIDE2_RS02180 fa2740e7be15c10e41d8e7d87db3d4f6 376 Gene3D G3DSA:3.30.420.10 217 343 6.7E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS02180 fa2740e7be15c10e41d8e7d87db3d4f6 376 Pfam PF13565 Homeodomain-like domain 62 141 2.6E-13 T 19-04-2016 ALIDE2_RS02180 fa2740e7be15c10e41d8e7d87db3d4f6 376 PANTHER PTHR30347 3 349 1.9E-64 T 19-04-2016 ALIDE2_RS02180 fa2740e7be15c10e41d8e7d87db3d4f6 376 SUPERFAMILY SSF46689 28 142 5.02E-17 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS17700 fa2740e7be15c10e41d8e7d87db3d4f6 376 PANTHER PTHR30347:SF1 3 349 1.9E-64 T 19-04-2016 ALIDE2_RS17700 fa2740e7be15c10e41d8e7d87db3d4f6 376 Pfam PF13358 DDE superfamily endonuclease 182 328 8.2E-29 T 19-04-2016 ALIDE2_RS17700 fa2740e7be15c10e41d8e7d87db3d4f6 376 Gene3D G3DSA:3.30.420.10 217 343 6.7E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS17700 fa2740e7be15c10e41d8e7d87db3d4f6 376 Pfam PF13565 Homeodomain-like domain 62 141 2.6E-13 T 19-04-2016 ALIDE2_RS17700 fa2740e7be15c10e41d8e7d87db3d4f6 376 PANTHER PTHR30347 3 349 1.9E-64 T 19-04-2016 ALIDE2_RS17700 fa2740e7be15c10e41d8e7d87db3d4f6 376 SUPERFAMILY SSF46689 28 142 5.02E-17 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS03480 e4bf8803a353ba58bec48095050a6ffa 384 Pfam PF13439 Glycosyltransferase Family 4 18 177 5.0E-19 T 19-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ALIDE2_RS03480 e4bf8803a353ba58bec48095050a6ffa 384 TIGRFAM TIGR03088 stp2: sugar transferase, PEP-CTERM/EpsH1 system associated 7 376 9.6E-152 T 19-04-2016 IPR017522 Sugar transferase, PEP-CTERM, Stp2 ALIDE2_RS03480 e4bf8803a353ba58bec48095050a6ffa 384 PANTHER PTHR12526 5 376 4.1E-57 T 19-04-2016 ALIDE2_RS03480 e4bf8803a353ba58bec48095050a6ffa 384 Gene3D G3DSA:3.40.50.2000 166 356 1.7E-30 T 19-04-2016 ALIDE2_RS03480 e4bf8803a353ba58bec48095050a6ffa 384 Pfam PF00534 Glycosyl transferases group 1 198 356 3.6E-31 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 ALIDE2_RS03480 e4bf8803a353ba58bec48095050a6ffa 384 SUPERFAMILY SSF53756 8 375 5.5E-76 T 19-04-2016 ALIDE2_RS19395 40f526ead3a2f0f71ca83cf84c277bb0 1362 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1009 1361 4.5E-60 T 19-04-2016 IPR007452 Translocation and assembly module TamB ALIDE2_RS19395 40f526ead3a2f0f71ca83cf84c277bb0 1362 PANTHER PTHR36985 7 1362 1.2E-45 T 19-04-2016 ALIDE2_RS23070 a361b10191728774453feacf620355e0 516 Pfam PF00501 AMP-binding enzyme 48 383 6.4E-60 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS23070 a361b10191728774453feacf620355e0 516 Gene3D G3DSA:3.30.300.30 411 512 3.4E-26 T 19-04-2016 ALIDE2_RS23070 a361b10191728774453feacf620355e0 516 SUPERFAMILY SSF56801 29 513 2.62E-124 T 19-04-2016 ALIDE2_RS23070 a361b10191728774453feacf620355e0 516 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 501 1.8E-21 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS23070 a361b10191728774453feacf620355e0 516 Gene3D G3DSA:2.30.38.10 353 383 4.0E-5 T 19-04-2016 ALIDE2_RS23070 a361b10191728774453feacf620355e0 516 Gene3D G3DSA:3.40.50.980 37 193 4.7E-30 T 19-04-2016 ALIDE2_RS23070 a361b10191728774453feacf620355e0 516 Gene3D G3DSA:3.40.50.980 194 352 9.0E-23 T 19-04-2016 ALIDE2_RS23070 a361b10191728774453feacf620355e0 516 PANTHER PTHR24095 31 513 3.4E-128 T 19-04-2016 ALIDE2_RS06735 7cc3e0e9ff4c1066be01fde5eeb38726 296 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 259 2.4E-46 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS06735 7cc3e0e9ff4c1066be01fde5eeb38726 296 PANTHER PTHR30085:SF2 11 287 6.2E-83 T 19-04-2016 ALIDE2_RS06735 7cc3e0e9ff4c1066be01fde5eeb38726 296 SUPERFAMILY SSF53850 10 263 2.41E-57 T 19-04-2016 ALIDE2_RS06735 7cc3e0e9ff4c1066be01fde5eeb38726 296 Gene3D G3DSA:3.40.190.10 33 115 1.5E-28 T 19-04-2016 ALIDE2_RS06735 7cc3e0e9ff4c1066be01fde5eeb38726 296 Gene3D G3DSA:3.40.190.10 223 264 1.5E-28 T 19-04-2016 ALIDE2_RS06735 7cc3e0e9ff4c1066be01fde5eeb38726 296 PANTHER PTHR30085 11 287 6.2E-83 T 19-04-2016 ALIDE2_RS06735 7cc3e0e9ff4c1066be01fde5eeb38726 296 SMART SM00062 36 262 2.2E-49 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS06735 7cc3e0e9ff4c1066be01fde5eeb38726 296 Gene3D G3DSA:3.40.190.10 116 222 1.1E-23 T 19-04-2016 ALIDE2_RS06725 00eaced734532981e79f6924c22f1301 297 Pfam PF03466 LysR substrate binding domain 90 294 2.2E-13 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS06725 00eaced734532981e79f6924c22f1301 297 SUPERFAMILY SSF46785 1 84 4.31E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06725 00eaced734532981e79f6924c22f1301 297 Gene3D G3DSA:3.40.190.10 83 163 1.1E-4 T 19-04-2016 ALIDE2_RS06725 00eaced734532981e79f6924c22f1301 297 Gene3D G3DSA:1.10.10.10 1 82 1.8E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06725 00eaced734532981e79f6924c22f1301 297 SUPERFAMILY SSF53850 90 295 2.17E-14 T 19-04-2016 ALIDE2_RS06725 00eaced734532981e79f6924c22f1301 297 PANTHER PTHR30126:SF2 1 294 1.1E-47 T 19-04-2016 ALIDE2_RS06725 00eaced734532981e79f6924c22f1301 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.3E-16 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06725 00eaced734532981e79f6924c22f1301 297 PANTHER PTHR30126 1 294 1.1E-47 T 19-04-2016 ALIDE2_RS06725 00eaced734532981e79f6924c22f1301 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06725 00eaced734532981e79f6924c22f1301 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06725 00eaced734532981e79f6924c22f1301 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06725 00eaced734532981e79f6924c22f1301 297 Gene3D G3DSA:3.40.190.10 195 259 9.2E-4 T 19-04-2016 ALIDE2_RS22615 d121fa02157dee643b4d8ab21f7360a9 242 Gene3D G3DSA:1.20.120.530 84 225 2.5E-31 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS22615 d121fa02157dee643b4d8ab21f7360a9 242 SMART SM00895 90 214 1.1E-21 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS22615 d121fa02157dee643b4d8ab21f7360a9 242 PANTHER PTHR11751 24 106 2.1E-23 T 19-04-2016 ALIDE2_RS22615 d121fa02157dee643b4d8ab21f7360a9 242 SUPERFAMILY SSF48008 86 223 7.85E-30 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS22615 d121fa02157dee643b4d8ab21f7360a9 242 TIGRFAM TIGR03338 phnR_burk: phosphonate utilization associated transcriptional regulator 8 218 4.0E-93 T 19-04-2016 IPR017723 Transcription regulator, 2-aminoethylphosphonate utilisation-associated ALIDE2_RS22615 d121fa02157dee643b4d8ab21f7360a9 242 SMART SM00345 22 80 5.2E-13 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS22615 d121fa02157dee643b4d8ab21f7360a9 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 2.9E-5 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS22615 d121fa02157dee643b4d8ab21f7360a9 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 2.9E-5 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS22615 d121fa02157dee643b4d8ab21f7360a9 242 Pfam PF07729 FCD domain 90 213 1.6E-28 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS22615 d121fa02157dee643b4d8ab21f7360a9 242 Gene3D G3DSA:1.10.10.10 8 81 1.7E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22615 d121fa02157dee643b4d8ab21f7360a9 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 80 1.7E-15 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS22615 d121fa02157dee643b4d8ab21f7360a9 242 SUPERFAMILY SSF46785 14 84 5.39E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS04940 9fc05ad433d9c3a23e2fd12100e7d669 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 60 4.4E-18 T 19-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ALIDE2_RS04940 9fc05ad433d9c3a23e2fd12100e7d669 162 PANTHER PTHR21342 1 158 5.0E-71 T 19-04-2016 ALIDE2_RS04940 9fc05ad433d9c3a23e2fd12100e7d669 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 158 3.0E-57 T 19-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 ALIDE2_RS04940 9fc05ad433d9c3a23e2fd12100e7d669 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 160 33.937 T 19-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 ALIDE2_RS04940 9fc05ad433d9c3a23e2fd12100e7d669 162 PANTHER PTHR21342:SF1 1 158 5.0E-71 T 19-04-2016 ALIDE2_RS04940 9fc05ad433d9c3a23e2fd12100e7d669 162 Gene3D G3DSA:3.40.50.620 5 159 1.1E-51 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS04940 9fc05ad433d9c3a23e2fd12100e7d669 162 Pfam PF01467 Cytidylyltransferase-like 7 135 5.4E-21 T 19-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ALIDE2_RS04940 9fc05ad433d9c3a23e2fd12100e7d669 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 4.2E-47 T 19-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 ALIDE2_RS04940 9fc05ad433d9c3a23e2fd12100e7d669 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 4.2E-47 T 19-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 ALIDE2_RS04940 9fc05ad433d9c3a23e2fd12100e7d669 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 4.2E-47 T 19-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 ALIDE2_RS04940 9fc05ad433d9c3a23e2fd12100e7d669 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 4.2E-47 T 19-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 ALIDE2_RS04940 9fc05ad433d9c3a23e2fd12100e7d669 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 4.2E-47 T 19-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 ALIDE2_RS04940 9fc05ad433d9c3a23e2fd12100e7d669 162 SUPERFAMILY SSF52374 4 157 1.21E-43 T 19-04-2016 ALIDE2_RS15015 02f2f0275c563b5d720e727f153e5386 690 SMART SM00491 509 649 6.9E-31 T 19-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ALIDE2_RS15015 02f2f0275c563b5d720e727f153e5386 690 PANTHER PTHR11472 1 665 1.3E-137 T 19-04-2016 ALIDE2_RS15015 02f2f0275c563b5d720e727f153e5386 690 PANTHER PTHR11472:SF37 1 665 1.3E-137 T 19-04-2016 ALIDE2_RS15015 02f2f0275c563b5d720e727f153e5386 690 Gene3D G3DSA:3.40.50.300 194 259 1.0E-18 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15015 02f2f0275c563b5d720e727f153e5386 690 Gene3D G3DSA:3.40.50.300 425 433 1.0E-18 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15015 02f2f0275c563b5d720e727f153e5386 690 Gene3D G3DSA:3.40.50.300 26 123 1.0E-18 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15015 02f2f0275c563b5d720e727f153e5386 690 Pfam PF13307 Helicase C-terminal domain 496 661 3.4E-32 T 19-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ALIDE2_RS15015 02f2f0275c563b5d720e727f153e5386 690 SUPERFAMILY SSF52540 608 636 1.54E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15015 02f2f0275c563b5d720e727f153e5386 690 SUPERFAMILY SSF52540 191 248 1.54E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15015 02f2f0275c563b5d720e727f153e5386 690 SUPERFAMILY SSF52540 14 114 1.54E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15015 02f2f0275c563b5d720e727f153e5386 690 Pfam PF06733 DEAD_2 181 250 1.9E-5 T 19-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 ALIDE2_RS00975 7a74362f3fa1639a34ba4f5357be89d4 309 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 5 295 14.429 T 19-04-2016 IPR002729 CRISPR-associated protein Cas1 ALIDE2_RS00975 7a74362f3fa1639a34ba4f5357be89d4 309 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 8 244 3.0E-27 T 19-04-2016 IPR002729 CRISPR-associated protein Cas1 ALIDE2_RS00975 7a74362f3fa1639a34ba4f5357be89d4 309 Pfam PF01867 CRISPR associated protein Cas1 12 242 6.1E-28 T 19-04-2016 IPR002729 CRISPR-associated protein Cas1 ALIDE2_RS00975 7a74362f3fa1639a34ba4f5357be89d4 309 PANTHER PTHR34353 1 240 1.9E-34 T 19-04-2016 ALIDE2_RS00975 7a74362f3fa1639a34ba4f5357be89d4 309 TIGRFAM TIGR03639 cas1_NMENI: CRISPR-associated endonuclease Cas1, subtype II/NMENI 4 279 1.4E-71 T 19-04-2016 IPR019855 CRISPR-associated protein Cas1, NMENI subtype ALIDE2_RS08650 2b1b3459042335f54ce9ec6c57cdef3b 469 Gene3D G3DSA:3.60.15.10 1 100 1.5E-52 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS08650 2b1b3459042335f54ce9ec6c57cdef3b 469 Gene3D G3DSA:3.60.15.10 134 262 1.5E-52 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS08650 2b1b3459042335f54ce9ec6c57cdef3b 469 PANTHER PTHR11203:SF11 1 461 1.6E-117 T 19-04-2016 ALIDE2_RS08650 2b1b3459042335f54ce9ec6c57cdef3b 469 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 391 454 2.2E-13 T 19-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain ALIDE2_RS08650 2b1b3459042335f54ce9ec6c57cdef3b 469 Pfam PF10996 Beta-Casp domain 252 377 1.6E-25 T 19-04-2016 IPR022712 Beta-Casp domain ALIDE2_RS08650 2b1b3459042335f54ce9ec6c57cdef3b 469 PANTHER PTHR11203 1 461 1.6E-117 T 19-04-2016 ALIDE2_RS08650 2b1b3459042335f54ce9ec6c57cdef3b 469 SUPERFAMILY SSF56281 1 461 1.44E-133 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS08650 2b1b3459042335f54ce9ec6c57cdef3b 469 Pfam PF00753 Metallo-beta-lactamase superfamily 11 197 1.6E-13 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS08650 2b1b3459042335f54ce9ec6c57cdef3b 469 SMART SM00849 13 224 2.2E-17 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS08650 2b1b3459042335f54ce9ec6c57cdef3b 469 SMART SM01027 252 377 9.2E-58 T 19-04-2016 IPR022712 Beta-Casp domain ALIDE2_RS19995 81c869cd9778cda2d6c5d9e436bb0a31 342 PANTHER PTHR30118 14 326 3.7E-75 T 19-04-2016 ALIDE2_RS19995 81c869cd9778cda2d6c5d9e436bb0a31 342 Gene3D G3DSA:3.40.190.10 191 288 2.0E-22 T 19-04-2016 ALIDE2_RS19995 81c869cd9778cda2d6c5d9e436bb0a31 342 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 4.3E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS19995 81c869cd9778cda2d6c5d9e436bb0a31 342 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.3E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS19995 81c869cd9778cda2d6c5d9e436bb0a31 342 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 4.3E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS19995 81c869cd9778cda2d6c5d9e436bb0a31 342 Gene3D G3DSA:1.10.10.10 20 103 2.3E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS19995 81c869cd9778cda2d6c5d9e436bb0a31 342 Pfam PF03466 LysR substrate binding domain 114 316 5.6E-22 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS19995 81c869cd9778cda2d6c5d9e436bb0a31 342 SUPERFAMILY SSF53850 107 315 1.99E-36 T 19-04-2016 ALIDE2_RS19995 81c869cd9778cda2d6c5d9e436bb0a31 342 PANTHER PTHR30118:SF4 14 326 3.7E-75 T 19-04-2016 ALIDE2_RS19995 81c869cd9778cda2d6c5d9e436bb0a31 342 Gene3D G3DSA:3.40.190.10 292 320 9.6E-27 T 19-04-2016 ALIDE2_RS19995 81c869cd9778cda2d6c5d9e436bb0a31 342 Gene3D G3DSA:3.40.190.10 107 190 9.6E-27 T 19-04-2016 ALIDE2_RS19995 81c869cd9778cda2d6c5d9e436bb0a31 342 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 8.3E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS19995 81c869cd9778cda2d6c5d9e436bb0a31 342 SUPERFAMILY SSF46785 21 103 1.69E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01340 fbc4fd0b29776650337cee33e429427d 330 Gene3D G3DSA:1.10.620.20 1 328 2.1E-102 T 19-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 ALIDE2_RS01340 fbc4fd0b29776650337cee33e429427d 330 SUPERFAMILY SSF47240 1 328 1.24E-103 T 19-04-2016 IPR009078 Ferritin-like superfamily ALIDE2_RS01340 fbc4fd0b29776650337cee33e429427d 330 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 52 273 1.1E-66 T 19-04-2016 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 ALIDE2_RS01340 fbc4fd0b29776650337cee33e429427d 330 PIRSF PIRSF000040 1 330 2.6E-93 T 19-04-2016 IPR012078 Methane/phenol monooxygenase, hydroxylase component GO:0016709|GO:0055114 ALIDE2_RS19885 1db88a913cbb1e30cf24509b01c796b2 159 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 19-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 ALIDE2_RS19885 1db88a913cbb1e30cf24509b01c796b2 159 PANTHER PTHR11995:SF19 10 156 1.5E-118 T 19-04-2016 ALIDE2_RS19885 1db88a913cbb1e30cf24509b01c796b2 159 SUPERFAMILY SSF56770 8 154 5.76E-67 T 19-04-2016 ALIDE2_RS19885 1db88a913cbb1e30cf24509b01c796b2 159 Gene3D G3DSA:3.40.50.700 20 149 2.5E-32 T 19-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 ALIDE2_RS19885 1db88a913cbb1e30cf24509b01c796b2 159 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 36 145 1.3E-22 T 19-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 ALIDE2_RS19885 1db88a913cbb1e30cf24509b01c796b2 159 PANTHER PTHR11995 10 156 1.5E-118 T 19-04-2016 ALIDE2_RS19885 1db88a913cbb1e30cf24509b01c796b2 159 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 3 151 42.735 T 19-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 ALIDE2_RS19885 1db88a913cbb1e30cf24509b01c796b2 159 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 10 152 2.1E-77 T 19-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 ALIDE2_RS18725 8ae6c3e261493873ea5ff86dce15c1e2 796 Pfam PF03772 Competence protein 237 504 2.1E-60 T 19-04-2016 IPR004477 ComEC/Rec2-related protein ALIDE2_RS18725 8ae6c3e261493873ea5ff86dce15c1e2 796 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 258 442 5.5E-26 T 19-04-2016 IPR004477 ComEC/Rec2-related protein ALIDE2_RS18725 8ae6c3e261493873ea5ff86dce15c1e2 796 Pfam PF13567 Domain of unknown function (DUF4131) 5 186 1.1E-29 T 19-04-2016 IPR025405 Domain of unknown function DUF4131 ALIDE2_RS18725 8ae6c3e261493873ea5ff86dce15c1e2 796 Gene3D G3DSA:3.60.15.10 522 756 3.4E-34 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS18725 8ae6c3e261493873ea5ff86dce15c1e2 796 SUPERFAMILY SSF56281 528 770 1.18E-42 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS18725 8ae6c3e261493873ea5ff86dce15c1e2 796 PANTHER PTHR30619 206 772 2.3E-156 T 19-04-2016 ALIDE2_RS18725 8ae6c3e261493873ea5ff86dce15c1e2 796 PANTHER PTHR30619 4 190 2.3E-156 T 19-04-2016 ALIDE2_RS18725 8ae6c3e261493873ea5ff86dce15c1e2 796 PANTHER PTHR30619:SF2 206 772 2.3E-156 T 19-04-2016 ALIDE2_RS18725 8ae6c3e261493873ea5ff86dce15c1e2 796 Pfam PF00753 Metallo-beta-lactamase superfamily 537 733 4.4E-9 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS18725 8ae6c3e261493873ea5ff86dce15c1e2 796 PANTHER PTHR30619:SF2 4 190 2.3E-156 T 19-04-2016 ALIDE2_RS18725 8ae6c3e261493873ea5ff86dce15c1e2 796 SMART SM00849 540 739 7.0E-12 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS18725 8ae6c3e261493873ea5ff86dce15c1e2 796 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 140 767 9.4E-106 T 19-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 ALIDE2_RS12700 c8d4f7d6c85ac4efaad7a2324461dfe8 295 PANTHER PTHR30126 4 294 1.0E-46 T 19-04-2016 ALIDE2_RS12700 c8d4f7d6c85ac4efaad7a2324461dfe8 295 Gene3D G3DSA:3.40.190.10 197 265 9.0E-9 T 19-04-2016 ALIDE2_RS12700 c8d4f7d6c85ac4efaad7a2324461dfe8 295 Gene3D G3DSA:3.40.190.10 83 196 1.5E-16 T 19-04-2016 ALIDE2_RS12700 c8d4f7d6c85ac4efaad7a2324461dfe8 295 Pfam PF03466 LysR substrate binding domain 91 292 6.8E-28 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS12700 c8d4f7d6c85ac4efaad7a2324461dfe8 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.2E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12700 c8d4f7d6c85ac4efaad7a2324461dfe8 295 Gene3D G3DSA:1.10.10.10 2 82 4.6E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12700 c8d4f7d6c85ac4efaad7a2324461dfe8 295 SUPERFAMILY SSF53850 91 294 2.02E-28 T 19-04-2016 ALIDE2_RS12700 c8d4f7d6c85ac4efaad7a2324461dfe8 295 SUPERFAMILY SSF46785 4 113 1.62E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20300 3350d3968a69465e1b6182e73a24ee01 300 Gene3D G3DSA:3.40.190.10 87 192 3.1E-22 T 19-04-2016 ALIDE2_RS20300 3350d3968a69465e1b6182e73a24ee01 300 SUPERFAMILY SSF53850 86 292 7.67E-34 T 19-04-2016 ALIDE2_RS20300 3350d3968a69465e1b6182e73a24ee01 300 Pfam PF03466 LysR substrate binding domain 85 288 2.6E-36 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS20300 3350d3968a69465e1b6182e73a24ee01 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 9.3E-17 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS20300 3350d3968a69465e1b6182e73a24ee01 300 SUPERFAMILY SSF46785 3 109 2.14E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20300 3350d3968a69465e1b6182e73a24ee01 300 Gene3D G3DSA:1.10.10.10 1 84 3.8E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20300 3350d3968a69465e1b6182e73a24ee01 300 PANTHER PTHR30126 1 299 1.3E-51 T 19-04-2016 ALIDE2_RS20300 3350d3968a69465e1b6182e73a24ee01 300 Gene3D G3DSA:3.40.190.10 193 256 8.7E-13 T 19-04-2016 ALIDE2_RS21190 ba5735b2ce4fe2e79f3588f859545a3b 389 PANTHER PTHR40457 112 389 2.5E-49 T 19-04-2016 ALIDE2_RS21190 ba5735b2ce4fe2e79f3588f859545a3b 389 SUPERFAMILY SSF56931 114 388 1.7E-77 T 19-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ALIDE2_RS21190 ba5735b2ce4fe2e79f3588f859545a3b 389 PRINTS PR01486 Bacterial phospholipase A1 protein signature 359 379 1.3E-9 T 19-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ALIDE2_RS21190 ba5735b2ce4fe2e79f3588f859545a3b 389 PRINTS PR01486 Bacterial phospholipase A1 protein signature 163 180 1.3E-9 T 19-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ALIDE2_RS21190 ba5735b2ce4fe2e79f3588f859545a3b 389 PRINTS PR01486 Bacterial phospholipase A1 protein signature 259 277 1.3E-9 T 19-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ALIDE2_RS21190 ba5735b2ce4fe2e79f3588f859545a3b 389 Gene3D G3DSA:2.40.230.10 112 388 4.4E-80 T 19-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ALIDE2_RS21190 ba5735b2ce4fe2e79f3588f859545a3b 389 Pfam PF02253 Phospholipase A1 112 386 2.3E-92 T 19-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ALIDE2_RS06630 d1c1ea3615a4f29b07942b50ebd67622 579 SUPERFAMILY SSF88723 118 180 7.65E-11 T 19-04-2016 IPR029060 PIN domain-like ALIDE2_RS06630 d1c1ea3615a4f29b07942b50ebd67622 579 SUPERFAMILY SSF88723 218 269 7.65E-11 T 19-04-2016 IPR029060 PIN domain-like ALIDE2_RS06630 d1c1ea3615a4f29b07942b50ebd67622 579 PANTHER PTHR30473 314 579 7.5E-174 T 19-04-2016 ALIDE2_RS06630 d1c1ea3615a4f29b07942b50ebd67622 579 PANTHER PTHR30473 118 295 7.5E-174 T 19-04-2016 ALIDE2_RS06630 d1c1ea3615a4f29b07942b50ebd67622 579 Gene3D G3DSA:3.40.50.1010 218 273 5.2E-11 T 19-04-2016 IPR029060 PIN domain-like ALIDE2_RS06630 d1c1ea3615a4f29b07942b50ebd67622 579 Gene3D G3DSA:3.40.50.1010 119 179 5.2E-11 T 19-04-2016 IPR029060 PIN domain-like ALIDE2_RS06630 d1c1ea3615a4f29b07942b50ebd67622 579 Gene3D G3DSA:3.40.50.300 363 578 4.6E-60 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06630 d1c1ea3615a4f29b07942b50ebd67622 579 Pfam PF02562 PhoH-like protein 365 565 8.0E-53 T 19-04-2016 IPR003714 PhoH-like protein GO:0005524 ALIDE2_RS06630 d1c1ea3615a4f29b07942b50ebd67622 579 SUPERFAMILY SSF52540 364 558 1.19E-29 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06630 d1c1ea3615a4f29b07942b50ebd67622 579 SMART SM00670 119 255 9.0E-10 T 19-04-2016 IPR002716 PIN domain ALIDE2_RS06630 d1c1ea3615a4f29b07942b50ebd67622 579 Pfam PF13638 PIN domain 121 268 5.5E-37 T 19-04-2016 IPR002716 PIN domain ALIDE2_RS06630 d1c1ea3615a4f29b07942b50ebd67622 579 PANTHER PTHR30473:SF2 314 579 7.5E-174 T 19-04-2016 ALIDE2_RS06630 d1c1ea3615a4f29b07942b50ebd67622 579 PANTHER PTHR30473:SF2 118 295 7.5E-174 T 19-04-2016 ALIDE2_RS02235 b635becfc3427b6050154c78a4ce6572 310 Gene3D G3DSA:3.40.50.720 18 182 2.2E-51 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS02235 b635becfc3427b6050154c78a4ce6572 310 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 185 303 1.4E-32 T 19-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ALIDE2_RS02235 b635becfc3427b6050154c78a4ce6572 310 Gene3D G3DSA:1.10.1040.10 185 305 9.8E-41 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS02235 b635becfc3427b6050154c78a4ce6572 310 PIRSF PIRSF000103 12 308 8.4E-67 T 19-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 ALIDE2_RS02235 b635becfc3427b6050154c78a4ce6572 310 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 19 179 4.9E-45 T 19-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 ALIDE2_RS02235 b635becfc3427b6050154c78a4ce6572 310 PANTHER PTHR22981 18 305 1.1E-145 T 19-04-2016 ALIDE2_RS02235 b635becfc3427b6050154c78a4ce6572 310 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 21 34 - T 19-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 ALIDE2_RS02235 b635becfc3427b6050154c78a4ce6572 310 PANTHER PTHR22981:SF49 18 305 1.1E-145 T 19-04-2016 ALIDE2_RS02235 b635becfc3427b6050154c78a4ce6572 310 SUPERFAMILY SSF48179 184 305 8.28E-38 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS02235 b635becfc3427b6050154c78a4ce6572 310 SUPERFAMILY SSF51735 18 183 1.35E-48 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21670 2be5595df1a4f15d59f1eb66bf0f5443 279 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 167 271 3.7E-35 T 19-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 ALIDE2_RS21670 2be5595df1a4f15d59f1eb66bf0f5443 279 SUPERFAMILY SSF51735 11 164 2.19E-28 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21670 2be5595df1a4f15d59f1eb66bf0f5443 279 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 9 271 25.684 T 19-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 ALIDE2_RS21670 2be5595df1a4f15d59f1eb66bf0f5443 279 Gene3D G3DSA:3.40.50.720 11 164 3.8E-35 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21670 2be5595df1a4f15d59f1eb66bf0f5443 279 Gene3D G3DSA:1.10.3730.10 166 271 1.7E-36 T 19-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 ALIDE2_RS21670 2be5595df1a4f15d59f1eb66bf0f5443 279 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 226 249 - T 19-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 ALIDE2_RS21670 2be5595df1a4f15d59f1eb66bf0f5443 279 PANTHER PTHR11645 11 275 5.6E-91 T 19-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 ALIDE2_RS21670 2be5595df1a4f15d59f1eb66bf0f5443 279 PANTHER PTHR11645:SF0 11 275 5.6E-91 T 19-04-2016 ALIDE2_RS21670 2be5595df1a4f15d59f1eb66bf0f5443 279 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 11 102 1.8E-13 T 19-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ALIDE2_RS21670 2be5595df1a4f15d59f1eb66bf0f5443 279 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 11 271 7.6E-76 T 19-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 ALIDE2_RS21670 2be5595df1a4f15d59f1eb66bf0f5443 279 PIRSF PIRSF000193 10 274 4.6E-68 T 19-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 ALIDE2_RS21670 2be5595df1a4f15d59f1eb66bf0f5443 279 SUPERFAMILY SSF48179 166 275 5.78E-34 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS10510 a7bab79d1d4d81856a11a843d4b865c2 148 SMART SM00363 8 69 2.5E-7 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS10510 a7bab79d1d4d81856a11a843d4b865c2 148 PANTHER PTHR11079:SF70 1 68 1.7E-12 T 19-04-2016 ALIDE2_RS10510 a7bab79d1d4d81856a11a843d4b865c2 148 SUPERFAMILY SSF55174 7 103 1.22E-27 T 19-04-2016 ALIDE2_RS10510 a7bab79d1d4d81856a11a843d4b865c2 148 PANTHER PTHR11079 1 68 1.7E-12 T 19-04-2016 ALIDE2_RS10510 a7bab79d1d4d81856a11a843d4b865c2 148 Pfam PF01479 S4 domain 8 54 2.2E-10 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS10510 a7bab79d1d4d81856a11a843d4b865c2 148 Gene3D G3DSA:3.10.290.10 5 104 7.6E-34 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS10510 a7bab79d1d4d81856a11a843d4b865c2 148 PIRSF PIRSF016821 5 133 1.6E-42 T 19-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 ALIDE2_RS06720 70bcc2b2247abe601690e1264fd2735a 440 PANTHER PTHR12227:SF0 13 439 7.6E-130 T 19-04-2016 ALIDE2_RS06720 70bcc2b2247abe601690e1264fd2735a 440 Pfam PF05161 MOFRL family 322 433 5.7E-34 T 19-04-2016 IPR007835 MOFRL domain ALIDE2_RS06720 70bcc2b2247abe601690e1264fd2735a 440 Gene3D G3DSA:3.40.50.10180 16 254 1.3E-100 T 19-04-2016 ALIDE2_RS06720 70bcc2b2247abe601690e1264fd2735a 440 Pfam PF13660 Domain of unknown function (DUF4147) 16 243 1.8E-81 T 19-04-2016 IPR025286 MOFRL-associated domain ALIDE2_RS06720 70bcc2b2247abe601690e1264fd2735a 440 PANTHER PTHR12227 13 439 7.6E-130 T 19-04-2016 ALIDE2_RS06720 70bcc2b2247abe601690e1264fd2735a 440 SUPERFAMILY SSF82544 11 439 4.05E-149 T 19-04-2016 ALIDE2_RS06720 70bcc2b2247abe601690e1264fd2735a 440 Gene3D G3DSA:3.40.1480.10 255 439 4.3E-71 T 19-04-2016 IPR007835 MOFRL domain ALIDE2_RS21275 5c318666760540a88a2525c227cc21f1 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 64 1.5E-20 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS21275 5c318666760540a88a2525c227cc21f1 231 Gene3D G3DSA:1.10.10.10 3 65 1.8E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS21275 5c318666760540a88a2525c227cc21f1 231 PANTHER PTHR11751 1 91 8.4E-27 T 19-04-2016 ALIDE2_RS21275 5c318666760540a88a2525c227cc21f1 231 SMART SM00895 75 202 7.4E-21 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS21275 5c318666760540a88a2525c227cc21f1 231 Pfam PF07729 FCD domain 75 201 1.4E-23 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS21275 5c318666760540a88a2525c227cc21f1 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 6.7E-5 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS21275 5c318666760540a88a2525c227cc21f1 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 6.7E-5 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS21275 5c318666760540a88a2525c227cc21f1 231 SUPERFAMILY SSF48008 72 203 5.23E-25 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS21275 5c318666760540a88a2525c227cc21f1 231 Gene3D G3DSA:1.20.120.530 72 207 7.2E-27 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS21275 5c318666760540a88a2525c227cc21f1 231 SUPERFAMILY SSF46785 4 92 8.85E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS21275 5c318666760540a88a2525c227cc21f1 231 SMART SM00345 8 66 9.7E-16 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05115 c8be541e06bc24ca424d53419f60d0fe 335 Gene3D G3DSA:1.10.10.60 283 331 1.0E-11 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS05115 c8be541e06bc24ca424d53419f60d0fe 335 SUPERFAMILY SSF46689 283 331 4.08E-10 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS05115 c8be541e06bc24ca424d53419f60d0fe 335 PANTHER PTHR11019 183 330 3.2E-19 T 19-04-2016 ALIDE2_RS05115 c8be541e06bc24ca424d53419f60d0fe 335 Gene3D G3DSA:1.10.10.60 251 270 8.0E-4 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS05115 c8be541e06bc24ca424d53419f60d0fe 335 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 204 1.2E-45 T 19-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal ALIDE2_RS05115 c8be541e06bc24ca424d53419f60d0fe 335 PANTHER PTHR11019:SF52 183 330 3.2E-19 T 19-04-2016 ALIDE2_RS05115 c8be541e06bc24ca424d53419f60d0fe 335 Pfam PF12833 Helix-turn-helix domain 255 331 9.1E-18 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS05115 c8be541e06bc24ca424d53419f60d0fe 335 SMART SM00342 248 330 9.6E-19 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS20185 d93a81239c188a589ca68f98915f0da2 163 SUPERFAMILY SSF109635 27 122 2.09E-31 T 19-04-2016 ALIDE2_RS20185 d93a81239c188a589ca68f98915f0da2 163 PANTHER PTHR33823:SF2 38 159 8.7E-37 T 19-04-2016 ALIDE2_RS20185 d93a81239c188a589ca68f98915f0da2 163 PANTHER PTHR33823 38 159 8.7E-37 T 19-04-2016 ALIDE2_RS20185 d93a81239c188a589ca68f98915f0da2 163 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 126 150 - T 19-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site ALIDE2_RS20185 d93a81239c188a589ca68f98915f0da2 163 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 40 162 27.646 T 19-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 ALIDE2_RS20185 d93a81239c188a589ca68f98915f0da2 163 SUPERFAMILY SSF57716 123 161 1.33E-7 T 19-04-2016 ALIDE2_RS20185 d93a81239c188a589ca68f98915f0da2 163 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 121 155 2.4E-10 T 19-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 ALIDE2_RS20185 d93a81239c188a589ca68f98915f0da2 163 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 44 152 3.0E-44 T 19-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 ALIDE2_RS14110 8d7b45507fdddad75a687c7d494fd24c 135 PANTHER PTHR34309:SF4 1 133 1.3E-47 T 19-04-2016 ALIDE2_RS14110 8d7b45507fdddad75a687c7d494fd24c 135 Pfam PF03928 Haem-degrading 7 130 8.1E-29 T 19-04-2016 IPR005624 Haem-degrading ALIDE2_RS14110 8d7b45507fdddad75a687c7d494fd24c 135 PANTHER PTHR34309 1 133 1.3E-47 T 19-04-2016 ALIDE2_RS14110 8d7b45507fdddad75a687c7d494fd24c 135 SUPERFAMILY SSF143744 2 134 1.96E-35 T 19-04-2016 ALIDE2_RS04600 823616844457b246c04a88aede0d6b55 207 PANTHER PTHR31876 4 205 2.1E-54 T 19-04-2016 ALIDE2_RS04600 823616844457b246c04a88aede0d6b55 207 Pfam PF04367 Protein of unknown function (DUF502) 59 164 2.0E-38 T 19-04-2016 IPR007462 Protein of unknown function DUF502 ALIDE2_RS04355 7d9585f6ef0906453920d3949ad66b2d 579 PANTHER PTHR30258:SF1 6 579 6.1E-228 T 19-04-2016 ALIDE2_RS04355 7d9585f6ef0906453920d3949ad66b2d 579 Gene3D G3DSA:3.30.450.90 172 302 1.7E-51 T 19-04-2016 ALIDE2_RS04355 7d9585f6ef0906453920d3949ad66b2d 579 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 52 151 1.4E-16 T 19-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 ALIDE2_RS04355 7d9585f6ef0906453920d3949ad66b2d 579 SUPERFAMILY SSF160246 13 150 3.14E-31 T 19-04-2016 ALIDE2_RS04355 7d9585f6ef0906453920d3949ad66b2d 579 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 397 411 - T 19-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ALIDE2_RS04355 7d9585f6ef0906453920d3949ad66b2d 579 Gene3D G3DSA:3.40.50.300 310 577 1.9E-97 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04355 7d9585f6ef0906453920d3949ad66b2d 579 SUPERFAMILY SSF52540 182 576 2.62E-97 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04355 7d9585f6ef0906453920d3949ad66b2d 579 Pfam PF00437 Type II/IV secretion system protein 203 469 6.0E-85 T 19-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ALIDE2_RS04355 7d9585f6ef0906453920d3949ad66b2d 579 PANTHER PTHR30258 6 579 6.1E-228 T 19-04-2016 ALIDE2_RS04355 7d9585f6ef0906453920d3949ad66b2d 579 SMART SM00382 330 453 6.6E-4 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS04355 7d9585f6ef0906453920d3949ad66b2d 579 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 19 578 2.4E-246 T 19-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 ALIDE2_RS04915 670ad8578146fb564ee8e6282e4cdf9a 317 Gene3D G3DSA:3.40.190.10 88 199 2.2E-5 T 19-04-2016 ALIDE2_RS04915 670ad8578146fb564ee8e6282e4cdf9a 317 PANTHER PTHR30126:SF2 8 310 1.5E-80 T 19-04-2016 ALIDE2_RS04915 670ad8578146fb564ee8e6282e4cdf9a 317 Pfam PF03466 LysR substrate binding domain 95 314 9.6E-16 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS04915 670ad8578146fb564ee8e6282e4cdf9a 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.2E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS04915 670ad8578146fb564ee8e6282e4cdf9a 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.2E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS04915 670ad8578146fb564ee8e6282e4cdf9a 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.2E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS04915 670ad8578146fb564ee8e6282e4cdf9a 317 PANTHER PTHR30126 8 310 1.5E-80 T 19-04-2016 ALIDE2_RS04915 670ad8578146fb564ee8e6282e4cdf9a 317 Gene3D G3DSA:1.10.10.10 9 87 3.4E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS04915 670ad8578146fb564ee8e6282e4cdf9a 317 SUPERFAMILY SSF53850 97 314 3.44E-15 T 19-04-2016 ALIDE2_RS04915 670ad8578146fb564ee8e6282e4cdf9a 317 Gene3D G3DSA:3.40.190.10 223 283 9.6E-5 T 19-04-2016 ALIDE2_RS04915 670ad8578146fb564ee8e6282e4cdf9a 317 SUPERFAMILY SSF46785 4 118 1.06E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS04915 670ad8578146fb564ee8e6282e4cdf9a 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 5.2E-20 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15315 a804bfb9d2e8d3cf69c5d05b60f0ad9d 395 PIRSF PIRSF000429 1 391 1.9E-64 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS15315 a804bfb9d2e8d3cf69c5d05b60f0ad9d 395 Pfam PF00108 Thiolase, N-terminal domain 5 114 2.4E-17 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS15315 a804bfb9d2e8d3cf69c5d05b60f0ad9d 395 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 78 96 - T 19-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 ALIDE2_RS15315 a804bfb9d2e8d3cf69c5d05b60f0ad9d 395 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 19-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 ALIDE2_RS15315 a804bfb9d2e8d3cf69c5d05b60f0ad9d 395 SUPERFAMILY SSF53901 266 382 8.42E-30 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS15315 a804bfb9d2e8d3cf69c5d05b60f0ad9d 395 PANTHER PTHR18919 1 395 1.1E-159 T 19-04-2016 ALIDE2_RS15315 a804bfb9d2e8d3cf69c5d05b60f0ad9d 395 Gene3D G3DSA:3.40.47.10 3 236 2.6E-27 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS15315 a804bfb9d2e8d3cf69c5d05b60f0ad9d 395 Pfam PF02803 Thiolase, C-terminal domain 272 366 8.6E-11 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS15315 a804bfb9d2e8d3cf69c5d05b60f0ad9d 395 SUPERFAMILY SSF53901 5 236 5.43E-48 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS15315 a804bfb9d2e8d3cf69c5d05b60f0ad9d 395 Gene3D G3DSA:3.40.47.10 268 389 3.5E-21 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS15315 a804bfb9d2e8d3cf69c5d05b60f0ad9d 395 PANTHER PTHR18919:SF83 1 395 1.1E-159 T 19-04-2016 ALIDE2_RS15065 b455705e8210408fe864f39f5941f42b 450 Pfam PF07287 Protein of unknown function (DUF1446) 9 352 4.7E-129 T 19-04-2016 IPR010839 Protein of unknown function DUF1446 ALIDE2_RS15065 b455705e8210408fe864f39f5941f42b 450 PANTHER PTHR13943 46 121 1.3E-107 T 19-04-2016 ALIDE2_RS15065 b455705e8210408fe864f39f5941f42b 450 PANTHER PTHR13943 142 443 1.3E-107 T 19-04-2016 ALIDE2_RS15065 b455705e8210408fe864f39f5941f42b 450 PANTHER PTHR13943:SF48 46 121 1.3E-107 T 19-04-2016 ALIDE2_RS15065 b455705e8210408fe864f39f5941f42b 450 PANTHER PTHR13943:SF48 142 443 1.3E-107 T 19-04-2016 ALIDE2_RS22130 e9e9b56649154ff8805be4a62e70a375 359 Gene3D G3DSA:3.40.50.300 1 141 4.8E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22130 e9e9b56649154ff8805be4a62e70a375 359 Gene3D G3DSA:1.20.272.20 230 346 3.8E-31 T 19-04-2016 ALIDE2_RS22130 e9e9b56649154ff8805be4a62e70a375 359 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 344 4.9E-72 T 19-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 ALIDE2_RS22130 e9e9b56649154ff8805be4a62e70a375 359 PANTHER PTHR34388 1 354 4.0E-52 T 19-04-2016 ALIDE2_RS22130 e9e9b56649154ff8805be4a62e70a375 359 Gene3D G3DSA:1.10.8.60 145 229 2.1E-34 T 19-04-2016 ALIDE2_RS22130 e9e9b56649154ff8805be4a62e70a375 359 Pfam PF06144 DNA polymerase III, delta subunit 20 197 6.3E-20 T 19-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 ALIDE2_RS22130 e9e9b56649154ff8805be4a62e70a375 359 SUPERFAMILY SSF52540 2 217 3.19E-41 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22130 e9e9b56649154ff8805be4a62e70a375 359 SUPERFAMILY SSF48019 219 347 1.21E-23 T 19-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 ALIDE2_RS15615 f32c247d2e59ff4c8f65eac3e77ff6c8 383 Pfam PF13353 4Fe-4S single cluster domain 52 142 9.5E-8 T 19-04-2016 ALIDE2_RS15615 f32c247d2e59ff4c8f65eac3e77ff6c8 383 SMART SM00729 44 257 8.6E-13 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ALIDE2_RS15615 f32c247d2e59ff4c8f65eac3e77ff6c8 383 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 35 383 3.5E-113 T 19-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS15615 f32c247d2e59ff4c8f65eac3e77ff6c8 383 Pfam PF06463 Molybdenum Cofactor Synthesis C 224 358 3.6E-33 T 19-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS15615 f32c247d2e59ff4c8f65eac3e77ff6c8 383 Gene3D G3DSA:3.20.20.70 35 361 8.5E-75 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS15615 f32c247d2e59ff4c8f65eac3e77ff6c8 383 PANTHER PTHR22960 41 330 1.1E-111 T 19-04-2016 ALIDE2_RS15615 f32c247d2e59ff4c8f65eac3e77ff6c8 383 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 35 383 40.706 T 19-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS15615 f32c247d2e59ff4c8f65eac3e77ff6c8 383 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 50 61 - T 19-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS15615 f32c247d2e59ff4c8f65eac3e77ff6c8 383 SUPERFAMILY SSF102114 36 344 1.22E-71 T 19-04-2016 ALIDE2_RS15615 f32c247d2e59ff4c8f65eac3e77ff6c8 383 Pfam PF04055 Radical SAM superfamily 48 217 4.7E-30 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ALIDE2_RS03250 db867c05c0f1838d9df28460e6a51efd 344 Gene3D G3DSA:3.40.50.720 140 295 2.7E-55 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03250 db867c05c0f1838d9df28460e6a51efd 344 PANTHER PTHR13812 50 325 5.4E-53 T 19-04-2016 ALIDE2_RS03250 db867c05c0f1838d9df28460e6a51efd 344 PANTHER PTHR13812:SF19 50 325 5.4E-53 T 19-04-2016 ALIDE2_RS03250 db867c05c0f1838d9df28460e6a51efd 344 SUPERFAMILY SSF51735 2 335 1.97E-97 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03250 db867c05c0f1838d9df28460e6a51efd 344 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 13 313 2.5E-98 T 19-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin ALIDE2_RS03250 db867c05c0f1838d9df28460e6a51efd 344 Gene3D G3DSA:3.30.1780.10 2 139 9.3E-38 T 19-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal ALIDE2_RS00065 437649f29192416774026795dce3f4b0 397 Pfam PF02515 CoA-transferase family III 4 365 1.5E-117 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS00065 437649f29192416774026795dce3f4b0 397 Gene3D G3DSA:3.30.1540.10 221 304 4.2E-29 T 19-04-2016 ALIDE2_RS00065 437649f29192416774026795dce3f4b0 397 Gene3D G3DSA:3.40.50.10540 305 391 1.1E-105 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00065 437649f29192416774026795dce3f4b0 397 Gene3D G3DSA:3.40.50.10540 4 216 1.1E-105 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00065 437649f29192416774026795dce3f4b0 397 SUPERFAMILY SSF89796 3 390 2.09E-129 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00065 437649f29192416774026795dce3f4b0 397 PANTHER PTHR24023 50 378 3.6E-25 T 19-04-2016 ALIDE2_RS00065 437649f29192416774026795dce3f4b0 397 PANTHER PTHR24023:SF577 50 378 3.6E-25 T 19-04-2016 ALIDE2_RS16085 7d410d5646f4a3bed08968d23531cee3 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 109 1.4E-19 T 19-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 ALIDE2_RS16085 7d410d5646f4a3bed08968d23531cee3 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 1.6E-16 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS16085 7d410d5646f4a3bed08968d23531cee3 220 SUPERFAMILY SSF161098 13 201 1.31E-32 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS16085 7d410d5646f4a3bed08968d23531cee3 220 Gene3D G3DSA:1.10.3720.10 11 217 6.8E-32 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS16085 7d410d5646f4a3bed08968d23531cee3 220 PANTHER PTHR30614 7 220 1.5E-46 T 19-04-2016 ALIDE2_RS05810 a4d7bdf485fd9c7a286a2d6e635b7f61 133 PANTHER PTHR34075 2 116 1.8E-23 T 19-04-2016 ALIDE2_RS05810 a4d7bdf485fd9c7a286a2d6e635b7f61 133 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 52 113 1.7E-15 T 19-04-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal ALIDE2_RS05810 a4d7bdf485fd9c7a286a2d6e635b7f61 133 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 16 47 8.3E-7 T 19-04-2016 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal ALIDE2_RS05810 a4d7bdf485fd9c7a286a2d6e635b7f61 133 SUPERFAMILY SSF50249 3 115 2.4E-27 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS05810 a4d7bdf485fd9c7a286a2d6e635b7f61 133 PANTHER PTHR34075:SF2 2 116 1.8E-23 T 19-04-2016 ALIDE2_RS22410 9e8e6e821626a5638991ba9d6ffacb93 173 Pfam PF02627 Carboxymuconolactone decarboxylase family 39 121 3.5E-12 T 19-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS22410 9e8e6e821626a5638991ba9d6ffacb93 173 Gene3D G3DSA:1.20.1290.10 29 171 1.4E-44 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS22410 9e8e6e821626a5638991ba9d6ffacb93 173 PANTHER PTHR34846:SF2 2 171 1.5E-43 T 19-04-2016 ALIDE2_RS22410 9e8e6e821626a5638991ba9d6ffacb93 173 SUPERFAMILY SSF69118 2 170 7.92E-39 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS22410 9e8e6e821626a5638991ba9d6ffacb93 173 PANTHER PTHR34846 2 171 1.5E-43 T 19-04-2016 ALIDE2_RS00535 252078e47953bb5182033444f4af5c6f 553 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 289 445 8.1E-35 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00535 252078e47953bb5182033444f4af5c6f 553 Gene3D G3DSA:1.20.140.10 281 451 8.2E-43 T 19-04-2016 ALIDE2_RS00535 252078e47953bb5182033444f4af5c6f 553 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 179 279 1.6E-15 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS00535 252078e47953bb5182033444f4af5c6f 553 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 404 423 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS00535 252078e47953bb5182033444f4af5c6f 553 SUPERFAMILY SSF47203 287 450 2.9E-40 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00535 252078e47953bb5182033444f4af5c6f 553 SUPERFAMILY SSF56645 53 296 8.51E-34 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS00535 252078e47953bb5182033444f4af5c6f 553 PANTHER PTHR10909:SF289 27 465 1.6E-160 T 19-04-2016 ALIDE2_RS00535 252078e47953bb5182033444f4af5c6f 553 PANTHER PTHR10909 27 465 1.6E-160 T 19-04-2016 ALIDE2_RS00535 252078e47953bb5182033444f4af5c6f 553 Gene3D G3DSA:2.40.110.10 179 280 3.7E-19 T 19-04-2016 ALIDE2_RS07560 e525ae201be7cfe184b58b273f1b8952 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 2.2E-28 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS07560 e525ae201be7cfe184b58b273f1b8952 383 SUPERFAMILY SSF47203 228 381 1.05E-56 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS07560 e525ae201be7cfe184b58b273f1b8952 383 Gene3D G3DSA:1.20.140.10 217 381 6.3E-68 T 19-04-2016 ALIDE2_RS07560 e525ae201be7cfe184b58b273f1b8952 383 Gene3D G3DSA:1.10.540.10 5 118 5.1E-27 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS07560 e525ae201be7cfe184b58b273f1b8952 383 PIRSF PIRSF016578 5 380 6.5E-20 T 19-04-2016 ALIDE2_RS07560 e525ae201be7cfe184b58b273f1b8952 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS07560 e525ae201be7cfe184b58b273f1b8952 383 Gene3D G3DSA:2.40.110.10 121 216 5.9E-41 T 19-04-2016 ALIDE2_RS07560 e525ae201be7cfe184b58b273f1b8952 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS07560 e525ae201be7cfe184b58b273f1b8952 383 SUPERFAMILY SSF56645 9 242 1.2E-75 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS07560 e525ae201be7cfe184b58b273f1b8952 383 PANTHER PTHR10909 6 383 5.5E-148 T 19-04-2016 ALIDE2_RS07560 e525ae201be7cfe184b58b273f1b8952 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 117 2.7E-24 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS07560 e525ae201be7cfe184b58b273f1b8952 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 379 2.8E-49 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS08470 ff781d63bc8e7b47dddb4dce7d679de5 241 Gene3D G3DSA:3.40.1410.10 96 232 1.5E-44 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ALIDE2_RS08470 ff781d63bc8e7b47dddb4dce7d679de5 241 SUPERFAMILY SSF64288 68 238 1.88E-39 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ALIDE2_RS08470 ff781d63bc8e7b47dddb4dce7d679de5 241 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 14 241 8.9E-89 T 19-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 ALIDE2_RS08470 ff781d63bc8e7b47dddb4dce7d679de5 241 Pfam PF07702 UTRA domain 99 236 7.9E-30 T 19-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ALIDE2_RS08470 ff781d63bc8e7b47dddb4dce7d679de5 241 SMART SM00866 99 236 1.3E-30 T 19-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ALIDE2_RS08470 ff781d63bc8e7b47dddb4dce7d679de5 241 SMART SM00345 19 78 1.7E-18 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS08470 ff781d63bc8e7b47dddb4dce7d679de5 241 Gene3D G3DSA:1.10.10.10 13 86 6.3E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08470 ff781d63bc8e7b47dddb4dce7d679de5 241 PANTHER PTHR11751:SF364 11 102 1.6E-30 T 19-04-2016 ALIDE2_RS08470 ff781d63bc8e7b47dddb4dce7d679de5 241 PANTHER PTHR11751 11 102 1.6E-30 T 19-04-2016 ALIDE2_RS08470 ff781d63bc8e7b47dddb4dce7d679de5 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 78 3.7E-19 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS08470 ff781d63bc8e7b47dddb4dce7d679de5 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 1.5E-5 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS08470 ff781d63bc8e7b47dddb4dce7d679de5 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 1.5E-5 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS08470 ff781d63bc8e7b47dddb4dce7d679de5 241 SUPERFAMILY SSF46785 12 82 2.03E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS04910 04878079430f6fb7c6fb652b18640cd3 312 Gene3D G3DSA:3.20.20.70 7 310 1.6E-73 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS04910 04878079430f6fb7c6fb652b18640cd3 312 SMART SM01130 6 308 1.3E-67 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS04910 04878079430f6fb7c6fb652b18640cd3 312 PANTHER PTHR12128 7 310 3.8E-58 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS04910 04878079430f6fb7c6fb652b18640cd3 312 PIRSF PIRSF001365 3 312 1.0E-55 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS04910 04878079430f6fb7c6fb652b18640cd3 312 SUPERFAMILY SSF51569 5 310 1.78E-66 T 19-04-2016 ALIDE2_RS04910 04878079430f6fb7c6fb652b18640cd3 312 Pfam PF00701 Dihydrodipicolinate synthetase family 7 306 1.3E-36 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS13535 6bcc009df0b28873f0a481edf5486b1a 220 SUPERFAMILY SSF53335 21 204 6.69E-27 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS13535 6bcc009df0b28873f0a481edf5486b1a 220 PANTHER PTHR10108 38 145 1.7E-18 T 19-04-2016 ALIDE2_RS13535 6bcc009df0b28873f0a481edf5486b1a 220 Pfam PF13649 Methyltransferase domain 50 145 9.6E-20 T 19-04-2016 ALIDE2_RS13535 6bcc009df0b28873f0a481edf5486b1a 220 Gene3D G3DSA:3.40.50.150 29 199 9.9E-27 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS14605 ce901b23b819a64e8e9ff0e6e56db05a 745 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 19-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ALIDE2_RS14605 ce901b23b819a64e8e9ff0e6e56db05a 745 Gene3D G3DSA:3.40.718.10 541 648 1.4E-30 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS14605 ce901b23b819a64e8e9ff0e6e56db05a 745 Gene3D G3DSA:3.40.718.10 167 286 1.4E-30 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS14605 ce901b23b819a64e8e9ff0e6e56db05a 745 Gene3D G3DSA:3.40.718.10 341 364 1.4E-30 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS14605 ce901b23b819a64e8e9ff0e6e56db05a 745 SUPERFAMILY SSF53659 5 743 0.0 T 19-04-2016 ALIDE2_RS14605 ce901b23b819a64e8e9ff0e6e56db05a 745 PANTHER PTHR36999 2 745 0.0 T 19-04-2016 ALIDE2_RS14605 ce901b23b819a64e8e9ff0e6e56db05a 745 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 744 0.0 T 19-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ALIDE2_RS14605 ce901b23b819a64e8e9ff0e6e56db05a 745 PIRSF PIRSF009407 1 744 0.0 T 19-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ALIDE2_RS08945 231b679575a78eba845d36fc181da390 328 SMART SM00382 122 254 2.7E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS08945 231b679575a78eba845d36fc181da390 328 SUPERFAMILY SSF52540 90 321 4.67E-42 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08945 231b679575a78eba845d36fc181da390 328 PANTHER PTHR23077 91 300 4.2E-33 T 19-04-2016 ALIDE2_RS08945 231b679575a78eba845d36fc181da390 328 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 126 251 8.2E-29 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS08945 231b679575a78eba845d36fc181da390 328 Gene3D G3DSA:3.40.50.300 90 264 2.0E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07025 54683fb73debcb12061735548c40d39f 275 SUPERFAMILY SSF48452 58 197 7.11E-23 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS07025 54683fb73debcb12061735548c40d39f 275 PANTHER PTHR23083 57 221 1.3E-23 T 19-04-2016 ALIDE2_RS07025 54683fb73debcb12061735548c40d39f 275 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 22 260 5.9E-58 T 19-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW ALIDE2_RS07025 54683fb73debcb12061735548c40d39f 275 Pfam PF13432 Tetratricopeptide repeat 137 195 7.4E-4 T 19-04-2016 ALIDE2_RS07025 54683fb73debcb12061735548c40d39f 275 SMART SM00028 91 124 4.5E-4 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS07025 54683fb73debcb12061735548c40d39f 275 SMART SM00028 57 90 31.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS07025 54683fb73debcb12061735548c40d39f 275 SMART SM00028 161 194 7.8 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS07025 54683fb73debcb12061735548c40d39f 275 Pfam PF14559 Tetratricopeptide repeat 68 127 1.2E-6 T 19-04-2016 ALIDE2_RS07025 54683fb73debcb12061735548c40d39f 275 Gene3D G3DSA:1.25.40.10 57 224 1.7E-27 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS10095 864adea0cb3afe13ddcaa5ac26cd00e3 504 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 22 475 4.0E-135 T 19-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 ALIDE2_RS10095 864adea0cb3afe13ddcaa5ac26cd00e3 504 Pfam PF05136 Phage portal protein, lambda family 23 365 1.5E-116 T 19-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 ALIDE2_RS00820 bc21aee554eff3ab28618ba4a119bf80 399 PIRSF PIRSF005962 12 399 9.5E-127 T 19-04-2016 IPR017439 Amidohydrolase GO:0016787 ALIDE2_RS00820 bc21aee554eff3ab28618ba4a119bf80 399 Gene3D G3DSA:3.40.630.10 19 190 1.6E-98 T 19-04-2016 ALIDE2_RS00820 bc21aee554eff3ab28618ba4a119bf80 399 Gene3D G3DSA:3.40.630.10 310 398 1.6E-98 T 19-04-2016 ALIDE2_RS00820 bc21aee554eff3ab28618ba4a119bf80 399 SUPERFAMILY SSF55031 193 311 9.68E-31 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS00820 bc21aee554eff3ab28618ba4a119bf80 399 SUPERFAMILY SSF53187 17 209 3.59E-86 T 19-04-2016 ALIDE2_RS00820 bc21aee554eff3ab28618ba4a119bf80 399 SUPERFAMILY SSF53187 310 398 3.59E-86 T 19-04-2016 ALIDE2_RS00820 bc21aee554eff3ab28618ba4a119bf80 399 Pfam PF01546 Peptidase family M20/M25/M40 83 395 3.3E-35 T 19-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 ALIDE2_RS00820 bc21aee554eff3ab28618ba4a119bf80 399 Gene3D G3DSA:3.30.70.360 194 309 3.5E-40 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS00820 bc21aee554eff3ab28618ba4a119bf80 399 PANTHER PTHR11014:SF63 5 398 9.2E-145 T 19-04-2016 ALIDE2_RS00820 bc21aee554eff3ab28618ba4a119bf80 399 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 24 382 2.4E-107 T 19-04-2016 IPR017439 Amidohydrolase GO:0016787 ALIDE2_RS00820 bc21aee554eff3ab28618ba4a119bf80 399 Pfam PF07687 Peptidase dimerisation domain 200 289 1.8E-7 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS00820 bc21aee554eff3ab28618ba4a119bf80 399 PANTHER PTHR11014 5 398 9.2E-145 T 19-04-2016 ALIDE2_RS15765 56c00ea732a5b713fe5128ff8f1edf02 180 Gene3D G3DSA:3.30.1330.60 73 178 1.3E-32 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS15765 56c00ea732a5b713fe5128ff8f1edf02 180 PRINTS PR01021 OMPA domain signature 109 124 2.1E-17 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ALIDE2_RS15765 56c00ea732a5b713fe5128ff8f1edf02 180 PRINTS PR01021 OMPA domain signature 79 101 2.1E-17 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ALIDE2_RS15765 56c00ea732a5b713fe5128ff8f1edf02 180 PRINTS PR01021 OMPA domain signature 124 140 2.1E-17 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ALIDE2_RS15765 56c00ea732a5b713fe5128ff8f1edf02 180 PANTHER PTHR30128:SF18 75 180 3.9E-46 T 19-04-2016 ALIDE2_RS15765 56c00ea732a5b713fe5128ff8f1edf02 180 PANTHER PTHR30128 75 180 3.9E-46 T 19-04-2016 ALIDE2_RS15765 56c00ea732a5b713fe5128ff8f1edf02 180 ProSitePatterns PS01068 OmpA-like domain. 111 155 - T 19-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 ALIDE2_RS15765 56c00ea732a5b713fe5128ff8f1edf02 180 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 77 179 7.9E-42 T 19-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 ALIDE2_RS15765 56c00ea732a5b713fe5128ff8f1edf02 180 Pfam PF00691 OmpA family 78 173 3.3E-22 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS15765 56c00ea732a5b713fe5128ff8f1edf02 180 SUPERFAMILY SSF103088 72 177 2.09E-33 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS15610 273a77df87b4ce135df0247f66cbcbbe 280 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 162 241 2.9E-12 T 19-04-2016 IPR029095 NarX-like, N-terminal ALIDE2_RS19720 d8fd04ae936f6217878a68b210832179 338 Pfam PF00069 Protein kinase domain 18 289 1.2E-40 T 19-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ALIDE2_RS19720 d8fd04ae936f6217878a68b210832179 338 Gene3D G3DSA:3.30.200.20 11 100 4.9E-17 T 19-04-2016 ALIDE2_RS19720 d8fd04ae936f6217878a68b210832179 338 Gene3D G3DSA:1.10.510.10 101 292 4.3E-42 T 19-04-2016 ALIDE2_RS19720 d8fd04ae936f6217878a68b210832179 338 PANTHER PTHR24362 8 58 3.0E-54 T 19-04-2016 ALIDE2_RS19720 d8fd04ae936f6217878a68b210832179 338 PANTHER PTHR24362 75 294 3.0E-54 T 19-04-2016 ALIDE2_RS19720 d8fd04ae936f6217878a68b210832179 338 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 160 172 - T 19-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 ALIDE2_RS19720 d8fd04ae936f6217878a68b210832179 338 SUPERFAMILY SSF56112 14 292 1.62E-58 T 19-04-2016 IPR011009 Protein kinase-like domain ALIDE2_RS19720 d8fd04ae936f6217878a68b210832179 338 SMART SM00220 18 293 9.6E-43 T 19-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ALIDE2_RS06245 cf937376a78cf862feb592b7cf6fc57e 339 Pfam PF00849 RNA pseudouridylate synthase 111 272 2.2E-29 T 19-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS06245 cf937376a78cf862feb592b7cf6fc57e 339 PANTHER PTHR11079:SF84 15 332 2.2E-113 T 19-04-2016 ALIDE2_RS06245 cf937376a78cf862feb592b7cf6fc57e 339 Pfam PF01479 S4 domain 33 79 5.2E-5 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS06245 cf937376a78cf862feb592b7cf6fc57e 339 PANTHER PTHR11079 15 332 2.2E-113 T 19-04-2016 ALIDE2_RS06245 cf937376a78cf862feb592b7cf6fc57e 339 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 29 332 1.9E-77 T 19-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS06245 cf937376a78cf862feb592b7cf6fc57e 339 Gene3D G3DSA:3.10.290.10 33 81 2.6E-4 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS06245 cf937376a78cf862feb592b7cf6fc57e 339 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 150 164 - T 19-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS06245 cf937376a78cf862feb592b7cf6fc57e 339 SUPERFAMILY SSF55174 32 83 3.34E-7 T 19-04-2016 ALIDE2_RS06245 cf937376a78cf862feb592b7cf6fc57e 339 SMART SM00363 33 91 7.7E-5 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS06245 cf937376a78cf862feb592b7cf6fc57e 339 SUPERFAMILY SSF55120 97 333 8.0E-66 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS21700 1769ac324e32ef6479e6f1dcb897966a 421 SMART SM00471 170 305 1.1E-11 T 19-04-2016 IPR003607 HD/PDEase domain ALIDE2_RS21700 1769ac324e32ef6479e6f1dcb897966a 421 Gene3D G3DSA:1.10.3210.10 167 319 1.3E-26 T 19-04-2016 IPR006674 HD domain ALIDE2_RS21700 1769ac324e32ef6479e6f1dcb897966a 421 SUPERFAMILY SSF109604 169 335 1.73E-33 T 19-04-2016 ALIDE2_RS21700 1769ac324e32ef6479e6f1dcb897966a 421 TIGRFAM TIGR00277 HDIG: HDIG domain 174 265 5.8E-10 T 19-04-2016 IPR006675 HDIG domain ALIDE2_RS21700 1769ac324e32ef6479e6f1dcb897966a 421 Pfam PF01966 HD domain 175 295 3.6E-17 T 19-04-2016 IPR006674 HD domain ALIDE2_RS21700 1769ac324e32ef6479e6f1dcb897966a 421 Pfam PF11871 Domain of unknown function (DUF3391) 2 141 2.1E-35 T 19-04-2016 IPR021812 Protein of unknown function DUF3391 ALIDE2_RS03500 cd83c853c1c1f51d960b8536d3d7bbd2 443 Pfam PF04932 O-Antigen ligase 204 353 1.7E-12 T 19-04-2016 IPR007016 O-antigen ligase-related ALIDE2_RS03500 cd83c853c1c1f51d960b8536d3d7bbd2 443 TIGRFAM TIGR03097 PEP_O_lig_1: probable O-glycosylation ligase, exosortase A-associated 2 420 1.5E-92 T 19-04-2016 IPR017528 Conserved hypothetical protein CHP03097, O-antigen ligase-related ALIDE2_RS21630 a10a8626634d2997e40598a9cdb5ba01 131 Pfam PF00410 Ribosomal protein S8 5 130 4.1E-50 T 19-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21630 a10a8626634d2997e40598a9cdb5ba01 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 19-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21630 a10a8626634d2997e40598a9cdb5ba01 131 SUPERFAMILY SSF56047 2 130 1.44E-48 T 19-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21630 a10a8626634d2997e40598a9cdb5ba01 131 Gene3D G3DSA:3.30.1490.10 75 130 5.3E-28 T 19-04-2016 ALIDE2_RS21630 a10a8626634d2997e40598a9cdb5ba01 131 Gene3D G3DSA:3.30.1370.30 2 72 1.4E-30 T 19-04-2016 ALIDE2_RS21630 a10a8626634d2997e40598a9cdb5ba01 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.589 T 19-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21630 a10a8626634d2997e40598a9cdb5ba01 131 PANTHER PTHR11758 1 131 1.4E-62 T 19-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS22540 026a9c96e9896c1d97bf8a237d2b6106 151 SUPERFAMILY SSF54637 3 143 8.36E-32 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS22540 026a9c96e9896c1d97bf8a237d2b6106 151 Gene3D G3DSA:3.10.129.10 6 142 3.7E-34 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS22540 026a9c96e9896c1d97bf8a237d2b6106 151 Pfam PF01575 MaoC like domain 20 106 1.5E-17 T 19-04-2016 IPR002539 MaoC-like domain ALIDE2_RS22540 026a9c96e9896c1d97bf8a237d2b6106 151 PANTHER PTHR13078 1 105 2.0E-16 T 19-04-2016 ALIDE2_RS22540 026a9c96e9896c1d97bf8a237d2b6106 151 PRINTS PR01483 Fatty acid synthase signature 25 47 9.8E-5 T 19-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 ALIDE2_RS22540 026a9c96e9896c1d97bf8a237d2b6106 151 PRINTS PR01483 Fatty acid synthase signature 48 69 9.8E-5 T 19-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 ALIDE2_RS12775 c5d2438e727602b678c4b9aa83fa16a7 275 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 13 254 2.4E-38 T 19-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 ALIDE2_RS12775 c5d2438e727602b678c4b9aa83fa16a7 275 PANTHER PTHR11624:SF86 3 273 1.4E-67 T 19-04-2016 ALIDE2_RS12775 c5d2438e727602b678c4b9aa83fa16a7 275 PANTHER PTHR11624 3 273 1.4E-67 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS12775 c5d2438e727602b678c4b9aa83fa16a7 275 SUPERFAMILY SSF52518 4 272 5.44E-76 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS12775 c5d2438e727602b678c4b9aa83fa16a7 275 Gene3D G3DSA:3.40.50.970 3 272 8.9E-83 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS14840 b8cddd8a7f3956b576a3e666bdab29de 201 PANTHER PTHR11592 43 187 1.7E-55 T 19-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 ALIDE2_RS14840 b8cddd8a7f3956b576a3e666bdab29de 201 Pfam PF00255 Glutathione peroxidase 56 152 3.9E-30 T 19-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 ALIDE2_RS14840 b8cddd8a7f3956b576a3e666bdab29de 201 Gene3D G3DSA:3.40.30.10 49 199 2.0E-49 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS14840 b8cddd8a7f3956b576a3e666bdab29de 201 PIRSF PIRSF000303 24 200 3.0E-56 T 19-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 ALIDE2_RS14840 b8cddd8a7f3956b576a3e666bdab29de 201 PRINTS PR01011 Glutathione peroxidase family signature 160 169 4.4E-13 T 19-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 ALIDE2_RS14840 b8cddd8a7f3956b576a3e666bdab29de 201 PRINTS PR01011 Glutathione peroxidase family signature 100 116 4.4E-13 T 19-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 ALIDE2_RS14840 b8cddd8a7f3956b576a3e666bdab29de 201 PRINTS PR01011 Glutathione peroxidase family signature 65 82 4.4E-13 T 19-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 ALIDE2_RS14840 b8cddd8a7f3956b576a3e666bdab29de 201 SUPERFAMILY SSF52833 48 198 3.55E-48 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS14840 b8cddd8a7f3956b576a3e666bdab29de 201 ProSitePatterns PS00460 Glutathione peroxidases active site. 67 82 - T 19-04-2016 IPR029759 Glutathione peroxidase active site ALIDE2_RS14840 b8cddd8a7f3956b576a3e666bdab29de 201 PANTHER PTHR11592:SF31 43 187 1.7E-55 T 19-04-2016 ALIDE2_RS04730 f182b875c053d9cb2fe8ca592746f465 165 Gene3D G3DSA:2.50.20.10 16 147 4.4E-25 T 19-04-2016 ALIDE2_RS04730 f182b875c053d9cb2fe8ca592746f465 165 Pfam PF03550 Outer membrane lipoprotein LolB 38 149 8.5E-18 T 19-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 ALIDE2_RS04730 f182b875c053d9cb2fe8ca592746f465 165 SUPERFAMILY SSF89392 24 137 3.02E-19 T 19-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX ALIDE2_RS14215 e8d42fc1c2a99c50561067f577711686 276 Pfam PF09955 Predicted integral membrane protein (DUF2189) 71 193 1.7E-37 T 19-04-2016 IPR018692 Predicted integral membrane protein DUF2189 ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 PANTHER PTHR24220 21 315 1.5E-188 T 19-04-2016 ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 PANTHER PTHR24220 348 458 1.5E-188 T 19-04-2016 ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 Gene3D G3DSA:3.40.50.300 320 573 4.1E-81 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 Gene3D G3DSA:3.40.50.300 20 277 2.2E-69 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 SUPERFAMILY SSF52540 20 275 3.13E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 549 600 5.0E-12 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 255 285 3.6E-6 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 551 597 2.8E-9 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 SMART SM00382 357 549 1.6E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 SMART SM00382 48 253 9.9E-17 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 PANTHER PTHR24220:SF442 21 315 1.5E-188 T 19-04-2016 ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 PANTHER PTHR24220:SF442 348 458 1.5E-188 T 19-04-2016 ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 SUPERFAMILY SSF52540 321 571 1.66E-72 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 Pfam PF00005 ABC transporter 349 498 2.8E-30 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 Pfam PF00005 ABC transporter 40 203 1.1E-25 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 ProSitePatterns PS00211 ABC transporters family signature. 176 190 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS23500 d6cd88ef2c604b3c4c1fe7f00e979cfc 624 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS07085 85dc3852c2bfc3a7a08d1c4f0ed423bf 382 Pfam PF13393 Histidyl-tRNA synthetase 9 313 2.5E-111 T 19-04-2016 ALIDE2_RS07085 85dc3852c2bfc3a7a08d1c4f0ed423bf 382 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 364 30.915 T 19-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 ALIDE2_RS07085 85dc3852c2bfc3a7a08d1c4f0ed423bf 382 Gene3D G3DSA:3.30.930.10 17 314 2.2E-62 T 19-04-2016 ALIDE2_RS07085 85dc3852c2bfc3a7a08d1c4f0ed423bf 382 PANTHER PTHR11476 12 314 1.1E-50 T 19-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 ALIDE2_RS07085 85dc3852c2bfc3a7a08d1c4f0ed423bf 382 PANTHER PTHR11476:SF5 12 314 1.1E-50 T 19-04-2016 ALIDE2_RS07085 85dc3852c2bfc3a7a08d1c4f0ed423bf 382 PIRSF PIRSF001549 5 331 1.9E-42 T 19-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 ALIDE2_RS07085 85dc3852c2bfc3a7a08d1c4f0ed423bf 382 SUPERFAMILY SSF55681 4 316 5.22E-54 T 19-04-2016 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.8E-78 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.8E-78 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.8E-78 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.8E-78 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.8E-78 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.8E-78 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.8E-78 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.8E-78 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.8E-78 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 SUPERFAMILY SSF50249 103 184 3.67E-13 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 SUPERFAMILY SSF50249 189 276 3.5E-25 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 PIRSF PIRSF002111 1 534 5.0E-208 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 PANTHER PTHR10724:SF6 1 514 6.8E-238 T 19-04-2016 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.6E-200 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 Gene3D G3DSA:2.40.50.140 361 442 1.0E-25 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 SUPERFAMILY SSF50249 343 440 2.47E-22 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 Pfam PF00575 S1 RNA binding domain 276 347 2.7E-20 T 19-04-2016 IPR003029 S1 domain GO:0003676 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 Pfam PF00575 S1 RNA binding domain 103 171 1.9E-9 T 19-04-2016 IPR003029 S1 domain GO:0003676 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 Pfam PF00575 S1 RNA binding domain 189 260 2.4E-21 T 19-04-2016 IPR003029 S1 domain GO:0003676 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 Pfam PF00575 S1 RNA binding domain 19 85 5.4E-6 T 19-04-2016 IPR003029 S1 domain GO:0003676 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 Pfam PF00575 S1 RNA binding domain 450 520 8.7E-17 T 19-04-2016 IPR003029 S1 domain GO:0003676 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 Pfam PF00575 S1 RNA binding domain 363 434 4.7E-19 T 19-04-2016 IPR003029 S1 domain GO:0003676 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 SMART SM00316 190 260 3.8E-28 T 19-04-2016 IPR022967 RNA-binding domain, S1 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 SMART SM00316 19 87 0.0018 T 19-04-2016 IPR022967 RNA-binding domain, S1 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 SMART SM00316 275 347 2.0E-24 T 19-04-2016 IPR022967 RNA-binding domain, S1 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 SMART SM00316 449 520 9.4E-20 T 19-04-2016 IPR022967 RNA-binding domain, S1 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 SMART SM00316 362 434 2.0E-21 T 19-04-2016 IPR022967 RNA-binding domain, S1 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 SMART SM00316 103 171 7.1E-6 T 19-04-2016 IPR022967 RNA-binding domain, S1 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 Gene3D G3DSA:2.40.50.140 184 261 1.2E-29 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 Gene3D G3DSA:2.40.50.140 446 521 6.1E-21 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 Gene3D G3DSA:2.40.50.140 101 172 3.2E-15 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 Gene3D G3DSA:2.40.50.140 281 360 8.0E-29 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 Gene3D G3DSA:2.40.50.140 21 100 5.6E-9 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 SUPERFAMILY SSF50249 2 111 4.19E-18 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 PANTHER PTHR10724 1 514 6.8E-238 T 19-04-2016 ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 SUPERFAMILY SSF50249 449 531 1.42E-18 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS09875 34f0e4b08225e3b6b93eb5970d583ac2 561 SUPERFAMILY SSF50249 255 358 1.04E-25 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS06360 fb39e3d04e4ec884a083bba3b8f23ada 337 Pfam PF07650 KH domain 244 324 2.9E-18 T 19-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 ALIDE2_RS06360 fb39e3d04e4ec884a083bba3b8f23ada 337 Gene3D G3DSA:3.40.50.300 45 228 7.2E-42 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06360 fb39e3d04e4ec884a083bba3b8f23ada 337 SUPERFAMILY SSF52540 47 241 2.24E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06360 fb39e3d04e4ec884a083bba3b8f23ada 337 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 47 67 2.5E-7 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS06360 fb39e3d04e4ec884a083bba3b8f23ada 337 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 115 133 2.5E-7 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS06360 fb39e3d04e4ec884a083bba3b8f23ada 337 Gene3D G3DSA:3.30.300.20 229 332 4.1E-37 T 19-04-2016 IPR015946 K homology domain-like, alpha/beta ALIDE2_RS06360 fb39e3d04e4ec884a083bba3b8f23ada 337 Hamap MF_00367 GTPase Era [era]. 42 336 33.73 T 19-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 ALIDE2_RS06360 fb39e3d04e4ec884a083bba3b8f23ada 337 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 45 205 3.6E-28 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ALIDE2_RS06360 fb39e3d04e4ec884a083bba3b8f23ada 337 PANTHER PTHR11649 42 337 1.6E-102 T 19-04-2016 ALIDE2_RS06360 fb39e3d04e4ec884a083bba3b8f23ada 337 Pfam PF01926 50S ribosome-binding GTPase 47 160 4.9E-22 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS06360 fb39e3d04e4ec884a083bba3b8f23ada 337 PANTHER PTHR11649:SF3 42 337 1.6E-102 T 19-04-2016 ALIDE2_RS06360 fb39e3d04e4ec884a083bba3b8f23ada 337 SUPERFAMILY SSF54814 217 337 1.83E-38 T 19-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 ALIDE2_RS06360 fb39e3d04e4ec884a083bba3b8f23ada 337 TIGRFAM TIGR00436 era: GTP-binding protein Era 46 319 1.7E-79 T 19-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 ALIDE2_RS18450 8ab6180c14dbaac60d200c502c4e48cf 337 SUPERFAMILY SSF53850 30 326 1.61E-63 T 19-04-2016 ALIDE2_RS18450 8ab6180c14dbaac60d200c502c4e48cf 337 Gene3D G3DSA:3.40.190.10 128 266 1.9E-40 T 19-04-2016 ALIDE2_RS18450 8ab6180c14dbaac60d200c502c4e48cf 337 Pfam PF13343 Bacterial extracellular solute-binding protein 77 319 5.3E-51 T 19-04-2016 ALIDE2_RS18450 8ab6180c14dbaac60d200c502c4e48cf 337 PANTHER PTHR30006 45 336 3.7E-46 T 19-04-2016 ALIDE2_RS18450 8ab6180c14dbaac60d200c502c4e48cf 337 Gene3D G3DSA:3.40.190.10 8 123 1.4E-30 T 19-04-2016 ALIDE2_RS18450 8ab6180c14dbaac60d200c502c4e48cf 337 Gene3D G3DSA:3.40.190.10 267 322 1.4E-30 T 19-04-2016 ALIDE2_RS17870 6f588ddd8bd54a34f9ba3fb02926e7a5 316 SUPERFAMILY SSF51735 18 186 5.07E-19 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS17870 6f588ddd8bd54a34f9ba3fb02926e7a5 316 Pfam PF02558 Ketopantoate reductase PanE/ApbA 19 164 1.2E-38 T 19-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 ALIDE2_RS17870 6f588ddd8bd54a34f9ba3fb02926e7a5 316 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 187 309 1.6E-34 T 19-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 ALIDE2_RS17870 6f588ddd8bd54a34f9ba3fb02926e7a5 316 Gene3D G3DSA:1.10.1040.10 196 312 2.0E-36 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS17870 6f588ddd8bd54a34f9ba3fb02926e7a5 316 PANTHER PTHR21708 12 313 2.1E-67 T 19-04-2016 ALIDE2_RS17870 6f588ddd8bd54a34f9ba3fb02926e7a5 316 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 17 313 1.8E-80 T 19-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 ALIDE2_RS17870 6f588ddd8bd54a34f9ba3fb02926e7a5 316 Gene3D G3DSA:3.40.50.720 16 195 3.7E-51 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS17870 6f588ddd8bd54a34f9ba3fb02926e7a5 316 SUPERFAMILY SSF48179 187 310 1.77E-31 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS17930 27d280ececba12ee0e1e4bf7d497c850 748 SUPERFAMILY SSF81301 223 402 1.1E-57 T 19-04-2016 ALIDE2_RS17930 27d280ececba12ee0e1e4bf7d497c850 748 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 58 744 8.8E-168 T 19-04-2016 IPR004811 RelA/SpoT family GO:0015969 ALIDE2_RS17930 27d280ececba12ee0e1e4bf7d497c850 748 Pfam PF13291 ACT domain 673 747 6.7E-16 T 19-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 ALIDE2_RS17930 27d280ececba12ee0e1e4bf7d497c850 748 Pfam PF04607 Region found in RelA / SpoT proteins 266 375 2.5E-35 T 19-04-2016 IPR007685 RelA/SpoT GO:0015969 ALIDE2_RS17930 27d280ececba12ee0e1e4bf7d497c850 748 SUPERFAMILY SSF55021 672 747 1.5E-13 T 19-04-2016 ALIDE2_RS17930 27d280ececba12ee0e1e4bf7d497c850 748 SMART SM00954 266 376 1.1E-60 T 19-04-2016 IPR007685 RelA/SpoT GO:0015969 ALIDE2_RS17930 27d280ececba12ee0e1e4bf7d497c850 748 Gene3D G3DSA:3.30.460.10 208 355 3.4E-49 T 19-04-2016 ALIDE2_RS17930 27d280ececba12ee0e1e4bf7d497c850 748 SUPERFAMILY SSF109604 31 221 5.02E-43 T 19-04-2016 ALIDE2_RS17930 27d280ececba12ee0e1e4bf7d497c850 748 Gene3D G3DSA:3.30.70.260 674 745 4.0E-16 T 19-04-2016 ALIDE2_RS17930 27d280ececba12ee0e1e4bf7d497c850 748 Pfam PF02824 TGS domain 420 478 3.1E-21 T 19-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 ALIDE2_RS17930 27d280ececba12ee0e1e4bf7d497c850 748 Gene3D G3DSA:3.10.20.30 419 481 3.1E-23 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS17930 27d280ececba12ee0e1e4bf7d497c850 748 SUPERFAMILY SSF81271 414 478 3.71E-19 T 19-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ALIDE2_RS17930 27d280ececba12ee0e1e4bf7d497c850 748 PANTHER PTHR21262:SF5 28 748 1.8E-245 T 19-04-2016 ALIDE2_RS17930 27d280ececba12ee0e1e4bf7d497c850 748 Pfam PF13328 HD domain 46 207 5.4E-48 T 19-04-2016 IPR003607 HD/PDEase domain ALIDE2_RS17930 27d280ececba12ee0e1e4bf7d497c850 748 PANTHER PTHR21262 28 748 1.8E-245 T 19-04-2016 ALIDE2_RS20515 1378847b7c183728ecd778fdaa8945ba 164 SUPERFAMILY SSF55826 15 162 1.1E-32 T 19-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ALIDE2_RS20515 1378847b7c183728ecd778fdaa8945ba 164 PANTHER PTHR30411 8 164 2.6E-21 T 19-04-2016 ALIDE2_RS20515 1378847b7c183728ecd778fdaa8945ba 164 Gene3D G3DSA:3.90.960.10 13 163 3.6E-43 T 19-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ALIDE2_RS20515 1378847b7c183728ecd778fdaa8945ba 164 Pfam PF04073 Aminoacyl-tRNA editing domain 35 152 5.2E-24 T 19-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 SUPERFAMILY SSF82693 155 191 5.89E-20 T 19-04-2016 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 PANTHER PTHR32063 2 1033 0.0 T 19-04-2016 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 Gene3D G3DSA:3.30.70.1430 579 667 1.4E-6 T 19-04-2016 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 Pfam PF00873 AcrB/AcrD/AcrF family 5 1033 0.0 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 SUPERFAMILY SSF82714 193 274 1.23E-18 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 Gene3D G3DSA:1.10.3850.10 820 1034 6.0E-60 T 19-04-2016 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 Gene3D G3DSA:1.10.3850.10 283 507 5.4E-50 T 19-04-2016 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 SUPERFAMILY SSF82714 725 814 1.7E-16 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 SUPERFAMILY SSF82693 42 127 4.19E-22 T 19-04-2016 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 SUPERFAMILY SSF82693 277 333 5.89E-20 T 19-04-2016 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 SUPERFAMILY SSF82693 579 667 4.71E-8 T 19-04-2016 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 SUPERFAMILY SSF82866 812 1038 1.29E-56 T 19-04-2016 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 Gene3D G3DSA:3.30.70.1430 42 142 1.4E-29 T 19-04-2016 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1043 0.0 T 19-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 PANTHER PTHR32063:SF24 2 1033 0.0 T 19-04-2016 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 SUPERFAMILY SSF82866 299 506 5.1E-33 T 19-04-2016 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 1.7E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.7E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.7E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.7E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 1.7E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.7E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.7E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 Gene3D G3DSA:3.30.2090.10 725 813 2.7E-18 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS16850 ddbbdbcd02c9928f7b6bc4c6066b2947 1061 Gene3D G3DSA:3.30.2090.10 192 274 9.5E-21 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS14115 237e41ddf187280a6b6961d4e19904d3 229 PANTHER PTHR23291:SF37 18 227 5.4E-39 T 19-04-2016 ALIDE2_RS14115 237e41ddf187280a6b6961d4e19904d3 229 PANTHER PTHR23291 18 227 5.4E-39 T 19-04-2016 IPR006214 Bax inhibitor 1-related ALIDE2_RS14115 237e41ddf187280a6b6961d4e19904d3 229 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 21 221 3.5E-40 T 19-04-2016 ALIDE2_RS19535 0ed81a35e62f277fe29420e39dff1242 210 Pfam PF00694 Aconitase C-terminal domain 1 123 7.7E-29 T 19-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19535 0ed81a35e62f277fe29420e39dff1242 210 PANTHER PTHR11670:SF38 1 197 3.6E-63 T 19-04-2016 ALIDE2_RS19535 0ed81a35e62f277fe29420e39dff1242 210 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 185 6.2E-52 T 19-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19535 0ed81a35e62f277fe29420e39dff1242 210 Gene3D G3DSA:3.20.19.10 1 191 5.6E-36 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS19535 0ed81a35e62f277fe29420e39dff1242 210 PANTHER PTHR11670 1 197 3.6E-63 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19535 0ed81a35e62f277fe29420e39dff1242 210 SUPERFAMILY SSF52016 1 191 3.92E-48 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS00245 b4b2c458bc84bc24872448f4e8b34d31 413 PANTHER PTHR30203 21 403 1.5E-38 T 19-04-2016 ALIDE2_RS00245 b4b2c458bc84bc24872448f4e8b34d31 413 Gene3D G3DSA:1.20.1600.10 20 399 5.4E-34 T 19-04-2016 ALIDE2_RS00245 b4b2c458bc84bc24872448f4e8b34d31 413 SUPERFAMILY SSF56954 6 403 1.7E-49 T 19-04-2016 ALIDE2_RS00245 b4b2c458bc84bc24872448f4e8b34d31 413 Pfam PF02321 Outer membrane efflux protein 238 402 3.8E-16 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS00245 b4b2c458bc84bc24872448f4e8b34d31 413 Pfam PF02321 Outer membrane efflux protein 24 207 1.6E-8 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS00145 f095d9e11ab4464893fdb4e7b62e8a9a 267 SUPERFAMILY SSF55781 91 259 8.5E-34 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00145 f095d9e11ab4464893fdb4e7b62e8a9a 267 Gene3D G3DSA:3.30.450.40 91 259 3.1E-37 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00145 f095d9e11ab4464893fdb4e7b62e8a9a 267 PANTHER PTHR30136 10 262 1.4E-77 T 19-04-2016 ALIDE2_RS00145 f095d9e11ab4464893fdb4e7b62e8a9a 267 PANTHER PTHR30136:SF4 10 262 1.4E-77 T 19-04-2016 ALIDE2_RS00145 f095d9e11ab4464893fdb4e7b62e8a9a 267 Pfam PF09339 IclR helix-turn-helix domain 21 70 2.1E-12 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS00145 f095d9e11ab4464893fdb4e7b62e8a9a 267 Gene3D G3DSA:1.10.10.10 11 80 5.4E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00145 f095d9e11ab4464893fdb4e7b62e8a9a 267 Pfam PF01614 Bacterial transcriptional regulator 139 246 2.3E-6 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS00145 f095d9e11ab4464893fdb4e7b62e8a9a 267 SUPERFAMILY SSF46785 19 92 3.53E-12 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00145 f095d9e11ab4464893fdb4e7b62e8a9a 267 SMART SM00346 19 109 3.7E-21 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS07745 d991c2e2e60129616a55b9d23053ff7f 566 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 551 4.6E-18 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS07745 d991c2e2e60129616a55b9d23053ff7f 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 216 227 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS07745 d991c2e2e60129616a55b9d23053ff7f 566 Pfam PF00501 AMP-binding enzyme 30 464 5.5E-105 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS07745 d991c2e2e60129616a55b9d23053ff7f 566 Gene3D G3DSA:2.30.38.10 379 456 4.3E-25 T 19-04-2016 ALIDE2_RS07745 d991c2e2e60129616a55b9d23053ff7f 566 Gene3D G3DSA:3.30.300.30 462 562 1.2E-27 T 19-04-2016 ALIDE2_RS07745 d991c2e2e60129616a55b9d23053ff7f 566 Gene3D G3DSA:3.40.50.980 223 378 4.0E-47 T 19-04-2016 ALIDE2_RS07745 d991c2e2e60129616a55b9d23053ff7f 566 SUPERFAMILY SSF56801 15 560 1.44E-148 T 19-04-2016 ALIDE2_RS07745 d991c2e2e60129616a55b9d23053ff7f 566 Gene3D G3DSA:3.40.50.980 23 155 4.0E-41 T 19-04-2016 ALIDE2_RS07745 d991c2e2e60129616a55b9d23053ff7f 566 Gene3D G3DSA:3.40.50.980 201 222 4.0E-41 T 19-04-2016 ALIDE2_RS07745 d991c2e2e60129616a55b9d23053ff7f 566 PANTHER PTHR24096 3 559 2.3E-152 T 19-04-2016 ALIDE2_RS07870 af56d5cc02ed55562c00a0e5418931f2 90 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 15 86 2.0E-4 T 19-04-2016 ALIDE2_RS07870 af56d5cc02ed55562c00a0e5418931f2 90 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 12 84 3.4E-10 T 19-04-2016 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB ALIDE2_RS07870 af56d5cc02ed55562c00a0e5418931f2 90 PIRSF PIRSF017854 5 90 1.2E-35 T 19-04-2016 IPR016704 Conjugal transfer, TrbD ALIDE2_RS14320 84a716c39a70b5ec74ede71da12a7d01 431 SUPERFAMILY SSF54826 6 143 5.02E-20 T 19-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ALIDE2_RS14320 84a716c39a70b5ec74ede71da12a7d01 431 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 37 143 2.3E-4 T 19-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ALIDE2_RS14320 84a716c39a70b5ec74ede71da12a7d01 431 Pfam PF13378 Enolase C-terminal domain-like 182 394 9.4E-44 T 19-04-2016 IPR029065 Enolase C-terminal domain-like ALIDE2_RS14320 84a716c39a70b5ec74ede71da12a7d01 431 SUPERFAMILY SSF51604 143 403 2.77E-65 T 19-04-2016 IPR029065 Enolase C-terminal domain-like ALIDE2_RS14320 84a716c39a70b5ec74ede71da12a7d01 431 SMART SM00922 179 273 1.7E-21 T 19-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ALIDE2_RS14320 84a716c39a70b5ec74ede71da12a7d01 431 PANTHER PTHR13794 117 420 2.9E-143 T 19-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 ALIDE2_RS14320 84a716c39a70b5ec74ede71da12a7d01 431 PANTHER PTHR13794 9 101 2.9E-143 T 19-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 ALIDE2_RS14320 84a716c39a70b5ec74ede71da12a7d01 431 PANTHER PTHR13794:SF56 117 420 2.9E-143 T 19-04-2016 ALIDE2_RS14320 84a716c39a70b5ec74ede71da12a7d01 431 PANTHER PTHR13794:SF56 9 101 2.9E-143 T 19-04-2016 ALIDE2_RS14320 84a716c39a70b5ec74ede71da12a7d01 431 Gene3D G3DSA:3.30.390.10 2 145 1.4E-31 T 19-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ALIDE2_RS14320 84a716c39a70b5ec74ede71da12a7d01 431 Gene3D G3DSA:3.20.20.120 146 388 3.8E-63 T 19-04-2016 IPR029065 Enolase C-terminal domain-like ALIDE2_RS09125 688d4dd2e92ecc0775e6657c416a0907 401 PIRSF PIRSF028408 1 399 1.3E-103 T 19-04-2016 IPR014544 Uncharacterised conserved protein UCP028408 ALIDE2_RS09125 688d4dd2e92ecc0775e6657c416a0907 401 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 210 390 1.4E-57 T 19-04-2016 IPR024534 Domain of unknown function DUF2220 ALIDE2_RS09125 688d4dd2e92ecc0775e6657c416a0907 401 Pfam PF11795 Uncharacterized protein conserved in bacteria N-term (DUF3322) 6 187 3.8E-60 T 19-04-2016 IPR024537 Domain of unknown function DUF3322 ALIDE2_RS14210 39d5fec3190bab14599ab2e7ccd8e256 215 PANTHER PTHR30383 14 213 2.3E-42 T 19-04-2016 ALIDE2_RS14210 39d5fec3190bab14599ab2e7ccd8e256 215 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 37 200 7.0E-25 T 19-04-2016 IPR013830 SGNH hydrolase-type esterase domain ALIDE2_RS14210 39d5fec3190bab14599ab2e7ccd8e256 215 PANTHER PTHR30383:SF5 14 213 2.3E-42 T 19-04-2016 ALIDE2_RS14210 39d5fec3190bab14599ab2e7ccd8e256 215 SUPERFAMILY SSF52266 34 214 2.9E-50 T 19-04-2016 IPR013830 SGNH hydrolase-type esterase domain ALIDE2_RS14210 39d5fec3190bab14599ab2e7ccd8e256 215 Gene3D G3DSA:3.40.50.1110 33 214 6.6E-54 T 19-04-2016 IPR013830 SGNH hydrolase-type esterase domain ALIDE2_RS16255 ba3d070277f42bedd5e8e7e6a41ff904 349 Gene3D G3DSA:3.40.190.10 5 122 4.5E-25 T 19-04-2016 ALIDE2_RS16255 ba3d070277f42bedd5e8e7e6a41ff904 349 Gene3D G3DSA:3.40.190.10 277 320 4.5E-25 T 19-04-2016 ALIDE2_RS16255 ba3d070277f42bedd5e8e7e6a41ff904 349 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 126 143 - T 19-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 ALIDE2_RS16255 ba3d070277f42bedd5e8e7e6a41ff904 349 SUPERFAMILY SSF53850 22 336 6.42E-77 T 19-04-2016 ALIDE2_RS16255 ba3d070277f42bedd5e8e7e6a41ff904 349 Pfam PF13416 Bacterial extracellular solute-binding protein 43 314 9.1E-27 T 19-04-2016 ALIDE2_RS16255 ba3d070277f42bedd5e8e7e6a41ff904 349 PANTHER PTHR30006:SF4 8 346 1.5E-112 T 19-04-2016 ALIDE2_RS16255 ba3d070277f42bedd5e8e7e6a41ff904 349 Gene3D G3DSA:3.40.190.10 131 276 1.2E-53 T 19-04-2016 ALIDE2_RS16255 ba3d070277f42bedd5e8e7e6a41ff904 349 PIRSF PIRSF002825 2 349 1.1E-74 T 19-04-2016 IPR026045 Ferric binding protein ALIDE2_RS16255 ba3d070277f42bedd5e8e7e6a41ff904 349 PANTHER PTHR30006 8 346 1.5E-112 T 19-04-2016 ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 615 1.2E-267 T 19-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 Gene3D G3DSA:3.40.50.920 492 615 1.9E-35 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 9 280 1.9E-124 T 19-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 PANTHER PTHR11624:SF20 239 629 0.0 T 19-04-2016 ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 PANTHER PTHR11624:SF20 22 216 0.0 T 19-04-2016 ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 ProSitePatterns PS00801 Transketolase signature 1. 34 53 - T 19-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 SUPERFAMILY SSF52518 315 502 2.44E-58 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 8 618 46.676 T 19-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 ProSitePatterns PS00802 Transketolase signature 2. 423 439 - T 19-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 SUPERFAMILY SSF52518 6 197 7.33E-84 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 SUPERFAMILY SSF52518 241 379 7.33E-84 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 Pfam PF02780 Transketolase, C-terminal domain 493 608 8.4E-28 T 19-04-2016 IPR033248 Transketolase, C-terminal domain ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 PANTHER PTHR11624 239 629 0.0 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 PANTHER PTHR11624 22 216 0.0 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 Pfam PF02779 Transketolase, pyrimidine binding domain 318 476 1.3E-40 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 SUPERFAMILY SSF52922 490 615 4.32E-33 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 Gene3D G3DSA:3.40.50.970 333 482 1.2E-38 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 SMART SM00861 317 481 1.2E-68 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 Gene3D G3DSA:3.40.50.970 23 199 6.6E-81 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS18690 10cf76756aafe0bcf7af868ae61a68d4 630 Gene3D G3DSA:3.40.50.970 240 332 6.6E-81 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS21240 e5ec4d2a84815bd176531c3e9ff9b6e5 390 Gene3D G3DSA:3.20.20.105 1 384 9.0E-161 T 19-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS21240 e5ec4d2a84815bd176531c3e9ff9b6e5 390 PANTHER PTHR21148 1 388 2.4E-161 T 19-04-2016 ALIDE2_RS21240 e5ec4d2a84815bd176531c3e9ff9b6e5 390 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 12 383 8.0E-145 T 19-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS21240 e5ec4d2a84815bd176531c3e9ff9b6e5 390 SUPERFAMILY SSF51713 1 382 1.18E-148 T 19-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS21240 e5ec4d2a84815bd176531c3e9ff9b6e5 390 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 12 384 1.1E-153 T 19-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS21240 e5ec4d2a84815bd176531c3e9ff9b6e5 390 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 2 380 54.391 T 19-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS21240 e5ec4d2a84815bd176531c3e9ff9b6e5 390 Pfam PF01702 Queuine tRNA-ribosyltransferase 130 382 1.2E-88 T 19-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS21240 e5ec4d2a84815bd176531c3e9ff9b6e5 390 PANTHER PTHR21148:SF26 1 388 2.4E-161 T 19-04-2016 ALIDE2_RS14430 603f028b7ebbe4175263d21db1f4b981 224 Gene3D G3DSA:1.20.120.530 84 220 4.0E-12 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS14430 603f028b7ebbe4175263d21db1f4b981 224 SMART SM00345 22 80 6.6E-11 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS14430 603f028b7ebbe4175263d21db1f4b981 224 Gene3D G3DSA:1.10.10.10 12 81 4.4E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14430 603f028b7ebbe4175263d21db1f4b981 224 SUPERFAMILY SSF46785 15 84 9.25E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14430 603f028b7ebbe4175263d21db1f4b981 224 Pfam PF07729 FCD domain 90 211 8.2E-14 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS14430 603f028b7ebbe4175263d21db1f4b981 224 SUPERFAMILY SSF48008 87 220 1.1E-12 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS14430 603f028b7ebbe4175263d21db1f4b981 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 80 1.6E-12 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS14430 603f028b7ebbe4175263d21db1f4b981 224 SMART SM00895 90 213 6.1E-8 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS14430 603f028b7ebbe4175263d21db1f4b981 224 PANTHER PTHR11751 23 110 6.7E-16 T 19-04-2016 ALIDE2_RS18845 fa3cdf68ae25add256b4b6160e6789c1 328 SUPERFAMILY SSF64397 4 267 6.02E-51 T 19-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 ALIDE2_RS18845 fa3cdf68ae25add256b4b6160e6789c1 328 PIRSF PIRSF005261 1 317 1.2E-57 T 19-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 ALIDE2_RS18845 fa3cdf68ae25add256b4b6160e6789c1 328 Pfam PF01430 Hsp33 protein 3 306 1.3E-75 T 19-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 ALIDE2_RS18845 fa3cdf68ae25add256b4b6160e6789c1 328 Gene3D G3DSA:3.90.1280.10 259 315 9.1E-24 T 19-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 ALIDE2_RS18845 fa3cdf68ae25add256b4b6160e6789c1 328 Gene3D G3DSA:1.10.287.480 210 250 8.8E-9 T 19-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain ALIDE2_RS18845 fa3cdf68ae25add256b4b6160e6789c1 328 Gene3D G3DSA:3.55.30.10 3 189 3.5E-56 T 19-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 ALIDE2_RS18845 fa3cdf68ae25add256b4b6160e6789c1 328 SUPERFAMILY SSF118352 260 314 5.36E-19 T 19-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 ALIDE2_RS18845 fa3cdf68ae25add256b4b6160e6789c1 328 PANTHER PTHR30111:SF1 4 321 1.3E-43 T 19-04-2016 ALIDE2_RS18845 fa3cdf68ae25add256b4b6160e6789c1 328 PANTHER PTHR30111 4 321 1.3E-43 T 19-04-2016 ALIDE2_RS19500 eacf765d429c1d5cb1a45ce70a35904e 209 SUPERFAMILY SSF53850 40 170 3.35E-11 T 19-04-2016 ALIDE2_RS19500 eacf765d429c1d5cb1a45ce70a35904e 209 PANTHER PTHR30349 14 173 1.0E-47 T 19-04-2016 ALIDE2_RS19500 eacf765d429c1d5cb1a45ce70a35904e 209 PANTHER PTHR30349:SF32 14 173 1.0E-47 T 19-04-2016 ALIDE2_RS19500 eacf765d429c1d5cb1a45ce70a35904e 209 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 19 205 9.5E-57 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS20065 c4f946756301eba2ec23ffdd4c3281bf 360 Pfam PF04199 Putative cyclase 107 288 8.7E-13 T 19-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 ALIDE2_RS20065 c4f946756301eba2ec23ffdd4c3281bf 360 PANTHER PTHR34861 22 360 8.8E-49 T 19-04-2016 ALIDE2_RS20065 c4f946756301eba2ec23ffdd4c3281bf 360 Gene3D G3DSA:3.50.30.50 187 360 4.2E-20 T 19-04-2016 ALIDE2_RS20065 c4f946756301eba2ec23ffdd4c3281bf 360 Gene3D G3DSA:3.50.30.50 111 151 4.2E-20 T 19-04-2016 ALIDE2_RS20065 c4f946756301eba2ec23ffdd4c3281bf 360 SUPERFAMILY SSF102198 120 141 1.96E-11 T 19-04-2016 ALIDE2_RS20065 c4f946756301eba2ec23ffdd4c3281bf 360 SUPERFAMILY SSF102198 181 359 1.96E-11 T 19-04-2016 ALIDE2_RS03630 bd15f75156bad71c56892c77a01f172d 86 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 2 76 25.04 T 19-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ALIDE2_RS03630 bd15f75156bad71c56892c77a01f172d 86 PANTHER PTHR33370 1 84 3.7E-35 T 19-04-2016 ALIDE2_RS03630 bd15f75156bad71c56892c77a01f172d 86 SUPERFAMILY SSF50249 4 72 1.37E-23 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS03630 bd15f75156bad71c56892c77a01f172d 86 Pfam PF01176 Translation initiation factor 1A / IF-1 8 71 2.0E-22 T 19-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 ALIDE2_RS03630 bd15f75156bad71c56892c77a01f172d 86 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 72 9.4E-30 T 19-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ALIDE2_RS03630 bd15f75156bad71c56892c77a01f172d 86 Gene3D G3DSA:2.40.50.140 2 72 7.5E-34 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS21380 78d8705f60f2132d4268032d9efab348 250 PANTHER PTHR24321 2 249 7.2E-53 T 19-04-2016 ALIDE2_RS21380 78d8705f60f2132d4268032d9efab348 250 PANTHER PTHR24321:SF6 2 249 7.2E-53 T 19-04-2016 ALIDE2_RS21380 78d8705f60f2132d4268032d9efab348 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.7E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21380 78d8705f60f2132d4268032d9efab348 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.7E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21380 78d8705f60f2132d4268032d9efab348 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.7E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21380 78d8705f60f2132d4268032d9efab348 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.7E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21380 78d8705f60f2132d4268032d9efab348 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.7E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21380 78d8705f60f2132d4268032d9efab348 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.7E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21380 78d8705f60f2132d4268032d9efab348 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 248 2.6E-70 T 19-04-2016 ALIDE2_RS21380 78d8705f60f2132d4268032d9efab348 250 SUPERFAMILY SSF51735 5 249 6.76E-87 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21380 78d8705f60f2132d4268032d9efab348 250 Gene3D G3DSA:3.40.50.720 1 249 2.8E-91 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21380 78d8705f60f2132d4268032d9efab348 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.2E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21380 78d8705f60f2132d4268032d9efab348 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.2E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21380 78d8705f60f2132d4268032d9efab348 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.2E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS13620 aa8c35a6e6beb6d6b4d0678ae3e323fd 537 Gene3D G3DSA:2.40.50.100 137 171 6.4E-7 T 19-04-2016 ALIDE2_RS13620 aa8c35a6e6beb6d6b4d0678ae3e323fd 537 Gene3D G3DSA:2.40.50.100 235 266 6.4E-7 T 19-04-2016 ALIDE2_RS13620 aa8c35a6e6beb6d6b4d0678ae3e323fd 537 PANTHER PTHR30097 50 433 1.1E-113 T 19-04-2016 ALIDE2_RS13620 aa8c35a6e6beb6d6b4d0678ae3e323fd 537 PANTHER PTHR30097:SF3 50 433 1.1E-113 T 19-04-2016 ALIDE2_RS13620 aa8c35a6e6beb6d6b4d0678ae3e323fd 537 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 120 341 1.6E-80 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS13620 aa8c35a6e6beb6d6b4d0678ae3e323fd 537 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 110 415 2.9E-43 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ALIDE2_RS13620 aa8c35a6e6beb6d6b4d0678ae3e323fd 537 SUPERFAMILY SSF111369 135 346 7.06E-14 T 19-04-2016 ALIDE2_RS13620 aa8c35a6e6beb6d6b4d0678ae3e323fd 537 Pfam PF11604 Copper binding periplasmic protein CusF 457 524 5.5E-25 T 19-04-2016 IPR021647 Copper binding periplasmic protein CusF ALIDE2_RS23160 c873ac329d96b0fb94cb6a5cb28731d3 323 PANTHER PTHR30349:SF16 4 315 6.0E-77 T 19-04-2016 ALIDE2_RS23160 c873ac329d96b0fb94cb6a5cb28731d3 323 PANTHER PTHR30349 4 315 6.0E-77 T 19-04-2016 ALIDE2_RS23160 c873ac329d96b0fb94cb6a5cb28731d3 323 SUPERFAMILY SSF53850 111 283 1.9E-11 T 19-04-2016 ALIDE2_RS23160 c873ac329d96b0fb94cb6a5cb28731d3 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 319 1.3E-85 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS23160 c873ac329d96b0fb94cb6a5cb28731d3 323 PIRSF PIRSF017082 1 323 1.9E-78 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS04430 be9d4516675b27385c3e1ac841747dd8 309 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 68 82 - T 19-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 ALIDE2_RS04430 be9d4516675b27385c3e1ac841747dd8 309 Pfam PF00348 Polyprenyl synthetase 20 252 2.8E-73 T 19-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 ALIDE2_RS04430 be9d4516675b27385c3e1ac841747dd8 309 SUPERFAMILY SSF48576 3 308 1.12E-94 T 19-04-2016 IPR008949 Isoprenoid synthase domain ALIDE2_RS04430 be9d4516675b27385c3e1ac841747dd8 309 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 190 202 - T 19-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 ALIDE2_RS04430 be9d4516675b27385c3e1ac841747dd8 309 PANTHER PTHR12001:SF47 1 309 8.7E-108 T 19-04-2016 ALIDE2_RS04430 be9d4516675b27385c3e1ac841747dd8 309 Gene3D G3DSA:1.10.600.10 1 308 4.5E-98 T 19-04-2016 IPR008949 Isoprenoid synthase domain ALIDE2_RS04430 be9d4516675b27385c3e1ac841747dd8 309 PANTHER PTHR12001 1 309 8.7E-108 T 19-04-2016 IPR017446 Polyprenyl synthetase-related ALIDE2_RS11065 4e15eff67c57044d112da7e02feb710d 386 Gene3D G3DSA:3.40.50.10540 16 231 3.6E-101 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS11065 4e15eff67c57044d112da7e02feb710d 386 Gene3D G3DSA:3.40.50.10540 320 382 3.6E-101 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS11065 4e15eff67c57044d112da7e02feb710d 386 PANTHER PTHR24023:SF593 69 222 9.4E-24 T 19-04-2016 ALIDE2_RS11065 4e15eff67c57044d112da7e02feb710d 386 SUPERFAMILY SSF89796 18 377 1.1E-121 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS11065 4e15eff67c57044d112da7e02feb710d 386 Pfam PF02515 CoA-transferase family III 20 376 4.3E-118 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS11065 4e15eff67c57044d112da7e02feb710d 386 Gene3D G3DSA:3.30.1540.10 237 319 5.5E-28 T 19-04-2016 ALIDE2_RS11065 4e15eff67c57044d112da7e02feb710d 386 PANTHER PTHR24023 69 222 9.4E-24 T 19-04-2016 ALIDE2_RS09365 d011cee3abc18aa024b9d8a0a038f77b 458 PANTHER PTHR13943 146 329 6.0E-63 T 19-04-2016 ALIDE2_RS09365 d011cee3abc18aa024b9d8a0a038f77b 458 PANTHER PTHR13943 41 115 6.0E-63 T 19-04-2016 ALIDE2_RS09365 d011cee3abc18aa024b9d8a0a038f77b 458 PANTHER PTHR13943:SF48 146 329 6.0E-63 T 19-04-2016 ALIDE2_RS09365 d011cee3abc18aa024b9d8a0a038f77b 458 PANTHER PTHR13943:SF48 41 115 6.0E-63 T 19-04-2016 ALIDE2_RS09365 d011cee3abc18aa024b9d8a0a038f77b 458 Pfam PF07287 Protein of unknown function (DUF1446) 8 368 2.5E-113 T 19-04-2016 IPR010839 Protein of unknown function DUF1446 ALIDE2_RS00865 221208fbedee6e39ca1fd1f499ab6d9d 143 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 36 127 2.9E-15 T 19-04-2016 IPR003736 Phenylacetic acid degradation-related domain ALIDE2_RS00865 221208fbedee6e39ca1fd1f499ab6d9d 143 Pfam PF03061 Thioesterase superfamily 47 121 2.2E-12 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS00865 221208fbedee6e39ca1fd1f499ab6d9d 143 SUPERFAMILY SSF54637 11 129 2.09E-27 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS00865 221208fbedee6e39ca1fd1f499ab6d9d 143 PANTHER PTHR12418 3 127 8.7E-18 T 19-04-2016 ALIDE2_RS00865 221208fbedee6e39ca1fd1f499ab6d9d 143 Gene3D G3DSA:3.10.129.10 10 128 2.1E-29 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS03950 c03857be1408f5f8197e4a9630fb84b9 109 Pfam PF01491 Frataxin-like domain 1 104 3.5E-23 T 19-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 ALIDE2_RS03950 c03857be1408f5f8197e4a9630fb84b9 109 Hamap MF_00142 Protein CyaY [cyaY]. 1 107 25.245 T 19-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 ALIDE2_RS03950 c03857be1408f5f8197e4a9630fb84b9 109 SMART SM01219 1 108 2.5E-44 T 19-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 ALIDE2_RS03950 c03857be1408f5f8197e4a9630fb84b9 109 ProSitePatterns PS01344 Frataxin family signature. 52 66 - T 19-04-2016 IPR020895 Frataxin conserved site ALIDE2_RS03950 c03857be1408f5f8197e4a9630fb84b9 109 Gene3D G3DSA:3.30.920.10 1 107 2.4E-25 T 19-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 ALIDE2_RS03950 c03857be1408f5f8197e4a9630fb84b9 109 SUPERFAMILY SSF55387 1 104 1.38E-29 T 19-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 ALIDE2_RS03950 c03857be1408f5f8197e4a9630fb84b9 109 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 3 107 2.3E-34 T 19-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 ALIDE2_RS03235 abf221b971eb6b32ccb1aadeaf2c1eb1 250 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 56 238 1.4E-11 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS03235 abf221b971eb6b32ccb1aadeaf2c1eb1 250 PANTHER PTHR30085 1 244 2.1E-76 T 19-04-2016 ALIDE2_RS03235 abf221b971eb6b32ccb1aadeaf2c1eb1 250 Gene3D G3DSA:1.10.3720.10 31 237 1.7E-39 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS03235 abf221b971eb6b32ccb1aadeaf2c1eb1 250 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 33 132 1.1E-17 T 19-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 ALIDE2_RS03235 abf221b971eb6b32ccb1aadeaf2c1eb1 250 SUPERFAMILY SSF161098 33 226 5.23E-38 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS03235 abf221b971eb6b32ccb1aadeaf2c1eb1 250 PANTHER PTHR30085:SF4 1 244 2.1E-76 T 19-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 ALIDE2_RS22755 0f24aec1603322e4ada51e004ef59b13 459 SUPERFAMILY SSF48557 10 458 8.17E-101 T 19-04-2016 IPR008948 L-Aspartase-like GO:0003824 ALIDE2_RS22755 0f24aec1603322e4ada51e004ef59b13 459 Gene3D G3DSA:1.20.200.10 119 393 7.7E-85 T 19-04-2016 ALIDE2_RS22755 0f24aec1603322e4ada51e004ef59b13 459 PANTHER PTHR11444 4 455 4.2E-248 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS22755 0f24aec1603322e4ada51e004ef59b13 459 ProSitePatterns PS00163 Fumarate lyases signature. 298 307 - T 19-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 ALIDE2_RS22755 0f24aec1603322e4ada51e004ef59b13 459 PANTHER PTHR11444:SF17 4 455 4.2E-248 T 19-04-2016 ALIDE2_RS22755 0f24aec1603322e4ada51e004ef59b13 459 Pfam PF00206 Lyase 14 316 5.8E-56 T 19-04-2016 IPR022761 Fumarate lyase, N-terminal ALIDE2_RS22755 0f24aec1603322e4ada51e004ef59b13 459 Pfam PF08328 Adenylosuccinate lyase C-terminal 335 449 2.8E-47 T 19-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 ALIDE2_RS22755 0f24aec1603322e4ada51e004ef59b13 459 Gene3D G3DSA:1.10.40.30 394 449 6.4E-29 T 19-04-2016 ALIDE2_RS22755 0f24aec1603322e4ada51e004ef59b13 459 Gene3D G3DSA:1.10.275.10 1 118 3.4E-44 T 19-04-2016 IPR024083 Fumarase/histidase, N-terminal ALIDE2_RS22755 0f24aec1603322e4ada51e004ef59b13 459 PRINTS PR00149 Fumarate lyase superfamily signature 255 282 3.3E-20 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS22755 0f24aec1603322e4ada51e004ef59b13 459 PRINTS PR00149 Fumarate lyase superfamily signature 298 314 3.3E-20 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS22755 0f24aec1603322e4ada51e004ef59b13 459 PRINTS PR00149 Fumarate lyase superfamily signature 162 180 3.3E-20 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS22755 0f24aec1603322e4ada51e004ef59b13 459 PRINTS PR00149 Fumarate lyase superfamily signature 116 134 3.3E-20 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS22755 0f24aec1603322e4ada51e004ef59b13 459 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 458 1.5E-117 T 19-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 ALIDE2_RS18005 5cc8a9e8719269bb0512b5b5bace2d5a 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 254 5.0E-51 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS18005 5cc8a9e8719269bb0512b5b5bace2d5a 254 PANTHER PTHR11941:SF85 6 254 2.1E-79 T 19-04-2016 ALIDE2_RS18005 5cc8a9e8719269bb0512b5b5bace2d5a 254 Gene3D G3DSA:3.90.226.10 3 251 1.1E-66 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS18005 5cc8a9e8719269bb0512b5b5bace2d5a 254 PANTHER PTHR11941 6 254 2.1E-79 T 19-04-2016 ALIDE2_RS18005 5cc8a9e8719269bb0512b5b5bace2d5a 254 SUPERFAMILY SSF52096 2 254 2.68E-69 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 Gene3D G3DSA:3.30.565.10 731 900 3.8E-33 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 SUPERFAMILY SSF52402 249 385 4.86E-11 T 19-04-2016 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 229 5.1E-95 T 19-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 Pfam PF00582 Universal stress protein family 249 380 2.3E-10 T 19-04-2016 IPR006016 UspA GO:0006950 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 Gene3D G3DSA:1.20.120.620 421 518 2.2E-22 T 19-04-2016 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 Gene3D G3DSA:1.10.287.130 673 730 3.3E-16 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 PANTHER PTHR24423:SF562 673 900 6.8E-181 T 19-04-2016 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 PANTHER PTHR24423:SF562 15 196 6.8E-181 T 19-04-2016 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 PANTHER PTHR24423:SF562 249 288 6.8E-181 T 19-04-2016 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 PANTHER PTHR24423:SF562 640 656 6.8E-181 T 19-04-2016 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 845 855 3.6E-14 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 886 899 3.6E-14 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 827 841 3.6E-14 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 861 879 3.6E-14 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 SMART SM00388 677 745 1.9E-16 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 SUPERFAMILY SSF47384 673 744 1.28E-13 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 Gene3D G3DSA:3.40.50.300 20 227 7.6E-98 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 794 900 3.4E-19 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 Pfam PF13493 Domain of unknown function (DUF4118) 422 520 1.8E-17 T 19-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 Pfam PF00512 His Kinase A (phospho-acceptor) domain 678 744 3.9E-13 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 SMART SM00387 789 902 3.0E-31 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 SUPERFAMILY SSF55874 735 900 1.31E-34 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 PANTHER PTHR24423 673 900 6.8E-181 T 19-04-2016 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 PANTHER PTHR24423 15 196 6.8E-181 T 19-04-2016 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 PANTHER PTHR24423 249 288 6.8E-181 T 19-04-2016 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 PANTHER PTHR24423 640 656 6.8E-181 T 19-04-2016 ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 SUPERFAMILY SSF52540 15 225 1.03E-6 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07200 bf29660b8418400a6d8555ee036e18b0 909 Gene3D G3DSA:3.40.50.620 248 385 8.1E-14 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS18025 925d307408db1f6fea7792d0897a15a5 174 SUPERFAMILY SSF69118 4 170 1.25E-43 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS18025 925d307408db1f6fea7792d0897a15a5 174 Pfam PF02627 Carboxymuconolactone decarboxylase family 41 121 3.0E-13 T 19-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS18025 925d307408db1f6fea7792d0897a15a5 174 Gene3D G3DSA:1.20.1290.10 30 169 2.1E-49 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS18025 925d307408db1f6fea7792d0897a15a5 174 PANTHER PTHR34846 22 174 1.2E-47 T 19-04-2016 ALIDE2_RS18025 925d307408db1f6fea7792d0897a15a5 174 PANTHER PTHR34846:SF2 22 174 1.2E-47 T 19-04-2016 ALIDE2_RS22080 ee0a88af98e3b0a4de89d69009c3fb15 399 TIGRFAM TIGR00843 benE: benzoate transporter 11 384 6.6E-124 T 19-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ALIDE2_RS22080 ee0a88af98e3b0a4de89d69009c3fb15 399 PANTHER PTHR30199:SF0 1 395 1.5E-154 T 19-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ALIDE2_RS22080 ee0a88af98e3b0a4de89d69009c3fb15 399 Pfam PF03594 Benzoate membrane transport protein 6 383 1.6E-138 T 19-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ALIDE2_RS22080 ee0a88af98e3b0a4de89d69009c3fb15 399 PANTHER PTHR30199 1 395 1.5E-154 T 19-04-2016 ALIDE2_RS06655 3ea95cc336e6b1f410cfa594cba85707 191 SMART SM00867 25 189 6.0E-56 T 19-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ALIDE2_RS06655 3ea95cc336e6b1f410cfa594cba85707 191 SUPERFAMILY SSF101874 24 191 1.18E-47 T 19-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ALIDE2_RS06655 3ea95cc336e6b1f410cfa594cba85707 191 PANTHER PTHR34406:SF1 5 191 4.9E-40 T 19-04-2016 ALIDE2_RS06655 3ea95cc336e6b1f410cfa594cba85707 191 Pfam PF04264 YceI-like domain 26 188 9.1E-35 T 19-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ALIDE2_RS06655 3ea95cc336e6b1f410cfa594cba85707 191 Gene3D G3DSA:2.40.128.110 23 191 3.7E-47 T 19-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ALIDE2_RS06655 3ea95cc336e6b1f410cfa594cba85707 191 PANTHER PTHR34406 5 191 4.9E-40 T 19-04-2016 ALIDE2_RS18705 63ae9383109b4eabf6ce9f6c8bb7f4e7 379 PANTHER PTHR21266 10 377 2.0E-37 T 19-04-2016 ALIDE2_RS18705 63ae9383109b4eabf6ce9f6c8bb7f4e7 379 SUPERFAMILY SSF50022 7 149 2.75E-32 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ALIDE2_RS18705 63ae9383109b4eabf6ce9f6c8bb7f4e7 379 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 173 372 1.5E-29 T 19-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 ALIDE2_RS18705 63ae9383109b4eabf6ce9f6c8bb7f4e7 379 SUPERFAMILY SSF55961 154 373 8.63E-44 T 19-04-2016 ALIDE2_RS18705 63ae9383109b4eabf6ce9f6c8bb7f4e7 379 Pfam PF00355 Rieske [2Fe-2S] domain 46 127 6.1E-10 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ALIDE2_RS18705 63ae9383109b4eabf6ce9f6c8bb7f4e7 379 Gene3D G3DSA:3.90.380.10 144 369 2.8E-6 T 19-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 ALIDE2_RS18705 63ae9383109b4eabf6ce9f6c8bb7f4e7 379 Gene3D G3DSA:2.102.10.10 39 143 8.4E-23 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ALIDE2_RS18705 63ae9383109b4eabf6ce9f6c8bb7f4e7 379 PANTHER PTHR21266:SF2 10 377 2.0E-37 T 19-04-2016 ALIDE2_RS21975 14071a19ce36ccf8b47c1b3f213a89cb 266 Pfam PF00005 ABC transporter 39 191 6.2E-33 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS21975 14071a19ce36ccf8b47c1b3f213a89cb 266 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS21975 14071a19ce36ccf8b47c1b3f213a89cb 266 Gene3D G3DSA:3.40.50.300 17 259 3.8E-67 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21975 14071a19ce36ccf8b47c1b3f213a89cb 266 SMART SM00382 48 247 1.8E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS21975 14071a19ce36ccf8b47c1b3f213a89cb 266 PANTHER PTHR24220:SF497 25 262 5.5E-132 T 19-04-2016 ALIDE2_RS21975 14071a19ce36ccf8b47c1b3f213a89cb 266 SUPERFAMILY SSF52540 24 262 1.93E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21975 14071a19ce36ccf8b47c1b3f213a89cb 266 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 24 266 3.6E-114 T 19-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 ALIDE2_RS21975 14071a19ce36ccf8b47c1b3f213a89cb 266 PANTHER PTHR24220 25 262 5.5E-132 T 19-04-2016 ALIDE2_RS21975 14071a19ce36ccf8b47c1b3f213a89cb 266 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 240 261 2.4E-7 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALIDE2_RS19145 99e784ce7d98f8a884d30f8bd1cddfcb 211 Gene3D G3DSA:3.40.30.10 4 206 1.2E-29 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS19145 99e784ce7d98f8a884d30f8bd1cddfcb 211 PANTHER PTHR13887 5 206 3.6E-38 T 19-04-2016 ALIDE2_RS19145 99e784ce7d98f8a884d30f8bd1cddfcb 211 Pfam PF01323 DSBA-like thioredoxin domain 6 205 1.9E-23 T 19-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 ALIDE2_RS19145 99e784ce7d98f8a884d30f8bd1cddfcb 211 SUPERFAMILY SSF52833 5 206 2.98E-32 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS19145 99e784ce7d98f8a884d30f8bd1cddfcb 211 PANTHER PTHR13887:SF10 5 206 3.6E-38 T 19-04-2016 ALIDE2_RS18825 8a02505b7d176d2e68b1b44da4d75a2f 259 Gene3D G3DSA:3.40.50.300 9 254 4.7E-77 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18825 8a02505b7d176d2e68b1b44da4d75a2f 259 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS18825 8a02505b7d176d2e68b1b44da4d75a2f 259 PANTHER PTHR24220 10 259 2.2E-159 T 19-04-2016 ALIDE2_RS18825 8a02505b7d176d2e68b1b44da4d75a2f 259 Pfam PF00005 ABC transporter 24 183 3.6E-33 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS18825 8a02505b7d176d2e68b1b44da4d75a2f 259 SMART SM00382 33 231 3.6E-16 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS18825 8a02505b7d176d2e68b1b44da4d75a2f 259 PIRSF PIRSF039085 5 259 2.1E-114 T 19-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ALIDE2_RS18825 8a02505b7d176d2e68b1b44da4d75a2f 259 SUPERFAMILY SSF52540 10 252 1.42E-73 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18825 8a02505b7d176d2e68b1b44da4d75a2f 259 PANTHER PTHR24220:SF347 10 259 2.2E-159 T 19-04-2016 ALIDE2_RS22960 b23b830d9541ed268c038006a9d2a80e 362 Pfam PF04303 PrpF protein 4 357 5.5E-119 T 19-04-2016 IPR007400 PrpF protein ALIDE2_RS22960 b23b830d9541ed268c038006a9d2a80e 362 PANTHER PTHR30349:SF39 4 137 1.2E-54 T 19-04-2016 ALIDE2_RS22960 b23b830d9541ed268c038006a9d2a80e 362 Gene3D G3DSA:3.10.310.10 3 179 9.5E-77 T 19-04-2016 ALIDE2_RS22960 b23b830d9541ed268c038006a9d2a80e 362 PANTHER PTHR30349 4 137 1.2E-54 T 19-04-2016 ALIDE2_RS22960 b23b830d9541ed268c038006a9d2a80e 362 SUPERFAMILY SSF54506 3 168 7.06E-64 T 19-04-2016 ALIDE2_RS22960 b23b830d9541ed268c038006a9d2a80e 362 Gene3D G3DSA:3.10.310.10 180 332 4.3E-49 T 19-04-2016 ALIDE2_RS22960 b23b830d9541ed268c038006a9d2a80e 362 SUPERFAMILY SSF54506 173 358 3.45E-55 T 19-04-2016 ALIDE2_RS08555 c5ec7c045abfbadb838b94c5e02b8ca1 310 Gene3D G3DSA:3.40.190.10 99 188 7.2E-15 T 19-04-2016 ALIDE2_RS08555 c5ec7c045abfbadb838b94c5e02b8ca1 310 Gene3D G3DSA:3.40.190.10 189 273 9.0E-15 T 19-04-2016 ALIDE2_RS08555 c5ec7c045abfbadb838b94c5e02b8ca1 310 Gene3D G3DSA:1.10.10.10 12 96 1.1E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08555 c5ec7c045abfbadb838b94c5e02b8ca1 310 Pfam PF03466 LysR substrate binding domain 98 306 2.0E-34 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS08555 c5ec7c045abfbadb838b94c5e02b8ca1 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 4.9E-17 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS08555 c5ec7c045abfbadb838b94c5e02b8ca1 310 PANTHER PTHR30126 12 306 2.2E-65 T 19-04-2016 ALIDE2_RS08555 c5ec7c045abfbadb838b94c5e02b8ca1 310 SUPERFAMILY SSF46785 12 121 3.31E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08555 c5ec7c045abfbadb838b94c5e02b8ca1 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 3.0E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS08555 c5ec7c045abfbadb838b94c5e02b8ca1 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 3.0E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS08555 c5ec7c045abfbadb838b94c5e02b8ca1 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 3.0E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS08555 c5ec7c045abfbadb838b94c5e02b8ca1 310 SUPERFAMILY SSF53850 99 307 6.05E-34 T 19-04-2016 ALIDE2_RS08555 c5ec7c045abfbadb838b94c5e02b8ca1 310 PANTHER PTHR30126:SF3 12 306 2.2E-65 T 19-04-2016 ALIDE2_RS18945 0133c6220a378f6b5d85e26f6b32eb00 195 SUPERFAMILY SSF53474 6 192 8.83E-18 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS18945 0133c6220a378f6b5d85e26f6b32eb00 195 Pfam PF05728 Uncharacterised protein family (UPF0227) 6 192 5.1E-47 T 19-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA ALIDE2_RS18945 0133c6220a378f6b5d85e26f6b32eb00 195 PANTHER PTHR35602 1 194 1.4E-48 T 19-04-2016 ALIDE2_RS18945 0133c6220a378f6b5d85e26f6b32eb00 195 PANTHER PTHR35602:SF3 1 194 1.4E-48 T 19-04-2016 ALIDE2_RS18945 0133c6220a378f6b5d85e26f6b32eb00 195 Gene3D G3DSA:3.40.50.1820 133 189 1.1E-17 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS18945 0133c6220a378f6b5d85e26f6b32eb00 195 Gene3D G3DSA:3.40.50.1820 4 100 1.1E-17 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS11815 c9cac20084b9b048d36d4b19a8db1e16 146 SUPERFAMILY SSF52402 1 145 1.76E-38 T 19-04-2016 ALIDE2_RS11815 c9cac20084b9b048d36d4b19a8db1e16 146 Gene3D G3DSA:3.40.50.620 1 145 1.3E-40 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS11815 c9cac20084b9b048d36d4b19a8db1e16 146 PANTHER PTHR31964 1 146 5.6E-32 T 19-04-2016 ALIDE2_RS11815 c9cac20084b9b048d36d4b19a8db1e16 146 Pfam PF00582 Universal stress protein family 1 145 2.8E-35 T 19-04-2016 IPR006016 UspA GO:0006950 ALIDE2_RS11815 c9cac20084b9b048d36d4b19a8db1e16 146 PANTHER PTHR31964:SF45 1 146 5.6E-32 T 19-04-2016 ALIDE2_RS11815 c9cac20084b9b048d36d4b19a8db1e16 146 PIRSF PIRSF006276 1 146 7.5E-22 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS11815 c9cac20084b9b048d36d4b19a8db1e16 146 PRINTS PR01438 Universal stress protein signature 123 145 2.5E-22 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS11815 c9cac20084b9b048d36d4b19a8db1e16 146 PRINTS PR01438 Universal stress protein signature 105 117 2.5E-22 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS11815 c9cac20084b9b048d36d4b19a8db1e16 146 PRINTS PR01438 Universal stress protein signature 2 20 2.5E-22 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS23185 f2c0dc08e8f5b7c653ae0685d4abfeb2 410 Gene3D G3DSA:2.40.110.10 134 230 2.1E-29 T 19-04-2016 ALIDE2_RS23185 f2c0dc08e8f5b7c653ae0685d4abfeb2 410 Gene3D G3DSA:1.20.140.10 231 393 1.5E-53 T 19-04-2016 ALIDE2_RS23185 f2c0dc08e8f5b7c653ae0685d4abfeb2 410 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 137 149 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS23185 f2c0dc08e8f5b7c653ae0685d4abfeb2 410 PANTHER PTHR10909:SF305 18 409 3.1E-115 T 19-04-2016 ALIDE2_RS23185 f2c0dc08e8f5b7c653ae0685d4abfeb2 410 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 22 131 5.1E-18 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS23185 f2c0dc08e8f5b7c653ae0685d4abfeb2 410 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 228 2.5E-24 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS23185 f2c0dc08e8f5b7c653ae0685d4abfeb2 410 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 348 367 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS23185 f2c0dc08e8f5b7c653ae0685d4abfeb2 410 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 388 3.6E-41 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS23185 f2c0dc08e8f5b7c653ae0685d4abfeb2 410 SUPERFAMILY SSF47203 239 393 1.55E-49 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS23185 f2c0dc08e8f5b7c653ae0685d4abfeb2 410 Gene3D G3DSA:1.10.540.10 18 132 4.1E-22 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS23185 f2c0dc08e8f5b7c653ae0685d4abfeb2 410 SUPERFAMILY SSF56645 19 250 2.62E-56 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS23185 f2c0dc08e8f5b7c653ae0685d4abfeb2 410 PANTHER PTHR10909 18 409 3.1E-115 T 19-04-2016 ALIDE2_RS23305 6a005d3f1639471adaabebacde74296c 258 SUPERFAMILY SSF52540 26 251 1.11E-55 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23305 6a005d3f1639471adaabebacde74296c 258 PANTHER PTHR24220 29 255 5.9E-106 T 19-04-2016 ALIDE2_RS23305 6a005d3f1639471adaabebacde74296c 258 Gene3D G3DSA:3.40.50.300 26 251 2.7E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23305 6a005d3f1639471adaabebacde74296c 258 PANTHER PTHR24220:SF568 29 255 5.9E-106 T 19-04-2016 ALIDE2_RS23305 6a005d3f1639471adaabebacde74296c 258 SMART SM00382 52 247 1.0E-5 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS23305 6a005d3f1639471adaabebacde74296c 258 Pfam PF00005 ABC transporter 43 183 6.7E-30 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS23305 6a005d3f1639471adaabebacde74296c 258 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS13345 17a8a756c75b20f8012758a3e809d79e 156 SUPERFAMILY SSF75471 5 95 2.75E-25 T 19-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 ALIDE2_RS13345 17a8a756c75b20f8012758a3e809d79e 156 Gene3D G3DSA:3.30.110.60 5 96 4.9E-27 T 19-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 ALIDE2_RS13345 17a8a756c75b20f8012758a3e809d79e 156 SMART SM01103 6 89 2.0E-37 T 19-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 ALIDE2_RS13345 17a8a756c75b20f8012758a3e809d79e 156 PANTHER PTHR31846 6 97 3.8E-13 T 19-04-2016 ALIDE2_RS13345 17a8a756c75b20f8012758a3e809d79e 156 Pfam PF01985 CRS1 / YhbY (CRM) domain 6 89 4.5E-17 T 19-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 ALIDE2_RS13345 17a8a756c75b20f8012758a3e809d79e 156 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 15 94 7.0E-31 T 19-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 ALIDE2_RS05935 c0816a8d7a333735b36e9585d7bd464d 148 Gene3D G3DSA:3.40.630.30 2 146 1.8E-36 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS05935 c0816a8d7a333735b36e9585d7bd464d 148 PANTHER PTHR23091 25 124 8.4E-13 T 19-04-2016 ALIDE2_RS05935 c0816a8d7a333735b36e9585d7bd464d 148 Pfam PF00583 Acetyltransferase (GNAT) family 41 122 2.8E-15 T 19-04-2016 IPR000182 GNAT domain GO:0008080 ALIDE2_RS05935 c0816a8d7a333735b36e9585d7bd464d 148 SUPERFAMILY SSF55729 18 127 5.32E-23 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS12575 866040b5c87b4194429a1904aac2aa7b 571 Gene3D G3DSA:3.30.70.20 512 555 1.9E-4 T 19-04-2016 ALIDE2_RS12575 866040b5c87b4194429a1904aac2aa7b 571 SUPERFAMILY SSF51905 14 225 1.44E-58 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12575 866040b5c87b4194429a1904aac2aa7b 571 SUPERFAMILY SSF51905 328 467 1.44E-58 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12575 866040b5c87b4194429a1904aac2aa7b 571 SUPERFAMILY SSF54373 227 327 2.94E-33 T 19-04-2016 ALIDE2_RS12575 866040b5c87b4194429a1904aac2aa7b 571 Gene3D G3DSA:3.50.50.60 16 297 2.1E-40 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12575 866040b5c87b4194429a1904aac2aa7b 571 PANTHER PTHR10617 12 492 1.2E-248 T 19-04-2016 ALIDE2_RS12575 866040b5c87b4194429a1904aac2aa7b 571 PANTHER PTHR10617:SF107 12 492 1.2E-248 T 19-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 ALIDE2_RS12575 866040b5c87b4194429a1904aac2aa7b 571 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 465 569 3.5E-51 T 19-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 ALIDE2_RS12575 866040b5c87b4194429a1904aac2aa7b 571 Pfam PF13450 NAD(P)-binding Rossmann-like domain 22 67 3.0E-7 T 19-04-2016 ALIDE2_RS12575 866040b5c87b4194429a1904aac2aa7b 571 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 19 41 1.1E-5 T 19-04-2016 ALIDE2_RS12575 866040b5c87b4194429a1904aac2aa7b 571 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 194 209 1.1E-5 T 19-04-2016 ALIDE2_RS12575 866040b5c87b4194429a1904aac2aa7b 571 SUPERFAMILY SSF54862 469 570 2.99E-29 T 19-04-2016 ALIDE2_RS12530 b5ac5ac0596f88f7a47f808a2dfbadd9 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 438 5.3E-8 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS12530 b5ac5ac0596f88f7a47f808a2dfbadd9 455 SMART SM00387 349 454 4.3E-12 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS12530 b5ac5ac0596f88f7a47f808a2dfbadd9 455 PANTHER PTHR24423:SF474 102 146 3.4E-41 T 19-04-2016 ALIDE2_RS12530 b5ac5ac0596f88f7a47f808a2dfbadd9 455 PANTHER PTHR24423:SF474 182 452 3.4E-41 T 19-04-2016 ALIDE2_RS12530 b5ac5ac0596f88f7a47f808a2dfbadd9 455 Gene3D G3DSA:1.10.287.130 233 299 2.0E-7 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS12530 b5ac5ac0596f88f7a47f808a2dfbadd9 455 SUPERFAMILY SSF55874 293 438 2.1E-20 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS12530 b5ac5ac0596f88f7a47f808a2dfbadd9 455 SUPERFAMILY SSF47384 226 302 2.75E-11 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS12530 b5ac5ac0596f88f7a47f808a2dfbadd9 455 PANTHER PTHR24423 102 146 3.4E-41 T 19-04-2016 ALIDE2_RS12530 b5ac5ac0596f88f7a47f808a2dfbadd9 455 PANTHER PTHR24423 182 452 3.4E-41 T 19-04-2016 ALIDE2_RS12530 b5ac5ac0596f88f7a47f808a2dfbadd9 455 Gene3D G3DSA:3.30.565.10 310 448 5.2E-18 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS12530 b5ac5ac0596f88f7a47f808a2dfbadd9 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 302 2.2E-7 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS12530 b5ac5ac0596f88f7a47f808a2dfbadd9 455 SMART SM00388 241 303 3.1E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 Gene3D G3DSA:1.10.287.730 158 179 4.6E-6 T 19-04-2016 ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 PANTHER PTHR22807:SF30 106 453 5.7E-69 T 19-04-2016 ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 Gene3D G3DSA:3.30.70.1170 182 237 2.1E-16 T 19-04-2016 ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 Pfam PF01189 16S rRNA methyltransferase RsmB/F 260 452 4.6E-52 T 19-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 SUPERFAMILY SSF48013 42 158 7.19E-15 T 19-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 335 346 - T 19-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 436 453 1.6E-23 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 262 272 1.6E-23 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 229 243 1.6E-23 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 386 402 1.6E-23 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 336 348 1.6E-23 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 Pfam PF01029 NusB family 39 135 8.7E-6 T 19-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 SUPERFAMILY SSF53335 150 453 2.34E-57 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 Gene3D G3DSA:3.40.50.150 243 453 6.4E-44 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 Gene3D G3DSA:1.10.940.10 12 157 1.2E-13 T 19-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ALIDE2_RS02065 ed480b1f73e9d39995d73c03c960e3dc 455 PANTHER PTHR22807 106 453 5.7E-69 T 19-04-2016 ALIDE2_RS11135 e4fa41a5c507b6cce608e27d896ca94d 337 Gene3D G3DSA:3.90.550.10 10 133 4.4E-32 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS11135 e4fa41a5c507b6cce608e27d896ca94d 337 PANTHER PTHR10859:SF86 7 328 4.4E-157 T 19-04-2016 ALIDE2_RS11135 e4fa41a5c507b6cce608e27d896ca94d 337 PANTHER PTHR10859 7 328 4.4E-157 T 19-04-2016 ALIDE2_RS11135 e4fa41a5c507b6cce608e27d896ca94d 337 Pfam PF00535 Glycosyl transferase family 2 15 178 4.4E-36 T 19-04-2016 IPR001173 Glycosyltransferase 2-like ALIDE2_RS11135 e4fa41a5c507b6cce608e27d896ca94d 337 SUPERFAMILY SSF53448 11 230 9.64E-41 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS20715 88a9c466f5c4581c604833e518b2257c 135 Gene3D G3DSA:1.10.1660.10 3 59 2.6E-19 T 19-04-2016 ALIDE2_RS20715 88a9c466f5c4581c604833e518b2257c 135 Gene3D G3DSA:1.10.1660.10 60 118 3.0E-11 T 19-04-2016 ALIDE2_RS20715 88a9c466f5c4581c604833e518b2257c 135 SUPERFAMILY SSF46955 3 112 4.4E-25 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS20715 88a9c466f5c4581c604833e518b2257c 135 PANTHER PTHR30204 1 124 3.3E-15 T 19-04-2016 ALIDE2_RS20715 88a9c466f5c4581c604833e518b2257c 135 SMART SM00422 4 74 1.4E-15 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS20715 88a9c466f5c4581c604833e518b2257c 135 Pfam PF13411 MerR HTH family regulatory protein 4 72 5.2E-15 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS17285 b097f71dfa31a6ad9617e91a6337fefb 443 Gene3D G3DSA:3.40.190.10 46 106 2.9E-9 T 19-04-2016 ALIDE2_RS17285 b097f71dfa31a6ad9617e91a6337fefb 443 PANTHER PTHR30024:SF13 8 430 3.8E-53 T 19-04-2016 ALIDE2_RS17285 b097f71dfa31a6ad9617e91a6337fefb 443 Pfam PF16868 NMT1-like family 52 255 5.0E-16 T 19-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family ALIDE2_RS17285 b097f71dfa31a6ad9617e91a6337fefb 443 PANTHER PTHR30024 8 430 3.8E-53 T 19-04-2016 ALIDE2_RS17285 b097f71dfa31a6ad9617e91a6337fefb 443 Gene3D G3DSA:3.40.190.10 146 269 1.6E-15 T 19-04-2016 ALIDE2_RS17285 b097f71dfa31a6ad9617e91a6337fefb 443 SUPERFAMILY SSF53850 44 294 2.38E-42 T 19-04-2016 ALIDE2_RS09695 84a207308514cc504c4e39efdd63284a 398 PIRSF PIRSF004810 1 395 1.1E-88 T 19-04-2016 IPR014047 Chromate transporter, long chain ALIDE2_RS09695 84a207308514cc504c4e39efdd63284a 398 TIGRFAM TIGR00937 2A51: chromate efflux transporter 27 388 7.5E-125 T 19-04-2016 IPR014047 Chromate transporter, long chain ALIDE2_RS09695 84a207308514cc504c4e39efdd63284a 398 PANTHER PTHR33567 19 398 5.7E-58 T 19-04-2016 ALIDE2_RS09695 84a207308514cc504c4e39efdd63284a 398 Pfam PF02417 Chromate transporter 224 388 2.4E-32 T 19-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 ALIDE2_RS09695 84a207308514cc504c4e39efdd63284a 398 Pfam PF02417 Chromate transporter 21 186 7.0E-35 T 19-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 ALIDE2_RS10925 0886d4eab91b83aa21fbe96b3190300c 554 Gene3D G3DSA:3.40.50.1820 138 371 1.3E-8 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS10925 0886d4eab91b83aa21fbe96b3190300c 554 SUPERFAMILY SSF53474 92 391 1.6E-24 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS10925 0886d4eab91b83aa21fbe96b3190300c 554 Pfam PF11339 Protein of unknown function (DUF3141) 23 553 1.1E-173 T 19-04-2016 IPR024501 Protein of unknown function DUF3141 ALIDE2_RS15300 94819679cf3512e3b4b9ee06a919045c 285 PANTHER PTHR11795:SF379 1 283 2.4E-75 T 19-04-2016 ALIDE2_RS15300 94819679cf3512e3b4b9ee06a919045c 285 PANTHER PTHR11795 1 283 2.4E-75 T 19-04-2016 ALIDE2_RS15300 94819679cf3512e3b4b9ee06a919045c 285 Pfam PF02653 Branched-chain amino acid transport system / permease component 4 269 8.2E-38 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS08060 9558795b16a2e577409a907924999ae9 168 PANTHER PTHR30471:SF5 17 168 1.6E-73 T 19-04-2016 ALIDE2_RS08060 9558795b16a2e577409a907924999ae9 168 PANTHER PTHR30471 17 168 1.6E-73 T 19-04-2016 ALIDE2_RS08060 9558795b16a2e577409a907924999ae9 168 SUPERFAMILY SSF102712 59 144 6.28E-6 T 19-04-2016 ALIDE2_RS08060 9558795b16a2e577409a907924999ae9 168 Pfam PF04002 RadC-like JAB domain 47 167 6.2E-45 T 19-04-2016 IPR025657 RadC-like JAB domain ALIDE2_RS08060 9558795b16a2e577409a907924999ae9 168 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 117 122 - T 19-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site ALIDE2_RS08060 9558795b16a2e577409a907924999ae9 168 TIGRFAM TIGR00608 radc: DNA repair protein RadC 16 168 4.2E-46 T 19-04-2016 IPR001405 RadC protein ALIDE2_RS08060 9558795b16a2e577409a907924999ae9 168 Gene3D G3DSA:3.40.140.10 45 168 2.8E-49 T 19-04-2016 ALIDE2_RS12915 5680c59f359ab7fdfb4c944cd1c93a1a 253 PANTHER PTHR21091:SF16 5 243 2.9E-64 T 19-04-2016 ALIDE2_RS12915 5680c59f359ab7fdfb4c944cd1c93a1a 253 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 88 121 - T 19-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 ALIDE2_RS12915 5680c59f359ab7fdfb4c944cd1c93a1a 253 Gene3D G3DSA:3.30.950.10 124 245 3.2E-36 T 19-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 ALIDE2_RS12915 5680c59f359ab7fdfb4c944cd1c93a1a 253 PANTHER PTHR21091 5 243 2.9E-64 T 19-04-2016 ALIDE2_RS12915 5680c59f359ab7fdfb4c944cd1c93a1a 253 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 222 5.6E-43 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 ALIDE2_RS12915 5680c59f359ab7fdfb4c944cd1c93a1a 253 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 8 244 1.3E-80 T 19-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 ALIDE2_RS12915 5680c59f359ab7fdfb4c944cd1c93a1a 253 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 13 27 - T 19-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 ALIDE2_RS12915 5680c59f359ab7fdfb4c944cd1c93a1a 253 Gene3D G3DSA:3.40.1010.10 7 123 1.9E-41 T 19-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 ALIDE2_RS12915 5680c59f359ab7fdfb4c944cd1c93a1a 253 SUPERFAMILY SSF53790 7 245 3.4E-67 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 ALIDE2_RS10315 1057fe3685ef0cfbd42a2736f587b257 154 SUPERFAMILY SSF109709 75 128 9.55E-9 T 19-04-2016 ALIDE2_RS14495 a0ffc0db92046066b0e17442808b2908 320 Gene3D G3DSA:3.30.70.1230 14 183 1.0E-24 T 19-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 ALIDE2_RS14495 a0ffc0db92046066b0e17442808b2908 320 SMART SM00240 225 274 3.0E-4 T 19-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ALIDE2_RS14495 a0ffc0db92046066b0e17442808b2908 320 PANTHER PTHR11920 201 218 2.1E-13 T 19-04-2016 ALIDE2_RS14495 a0ffc0db92046066b0e17442808b2908 320 PANTHER PTHR11920 15 182 2.1E-13 T 19-04-2016 ALIDE2_RS14495 a0ffc0db92046066b0e17442808b2908 320 SUPERFAMILY SSF55073 11 182 5.49E-37 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS14495 a0ffc0db92046066b0e17442808b2908 320 Pfam PF00498 FHA domain 227 271 1.3E-9 T 19-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ALIDE2_RS14495 a0ffc0db92046066b0e17442808b2908 320 Gene3D G3DSA:2.60.200.20 225 273 2.4E-12 T 19-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ALIDE2_RS14495 a0ffc0db92046066b0e17442808b2908 320 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 15 177 1.9E-13 T 19-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 ALIDE2_RS14495 a0ffc0db92046066b0e17442808b2908 320 PANTHER PTHR11920:SF341 201 218 2.1E-13 T 19-04-2016 ALIDE2_RS14495 a0ffc0db92046066b0e17442808b2908 320 PANTHER PTHR11920:SF341 15 182 2.1E-13 T 19-04-2016 ALIDE2_RS14495 a0ffc0db92046066b0e17442808b2908 320 SUPERFAMILY SSF49879 217 296 6.7E-15 T 19-04-2016 IPR008984 SMAD/FHA domain GO:0005515 ALIDE2_RS12940 a47b36858e8be78028b69d76276da0b4 184 SUPERFAMILY SSF117916 84 183 9.48E-27 T 19-04-2016 ALIDE2_RS12940 a47b36858e8be78028b69d76276da0b4 184 PANTHER PTHR13696 11 182 1.7E-32 T 19-04-2016 ALIDE2_RS12940 a47b36858e8be78028b69d76276da0b4 184 Pfam PF01883 Domain of unknown function DUF59 87 162 1.3E-14 T 19-04-2016 IPR002744 Domain of unknown function DUF59 ALIDE2_RS12940 a47b36858e8be78028b69d76276da0b4 184 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 10 184 7.2E-68 T 19-04-2016 IPR017776 FeS assembly SUF system protein SufT, putative ALIDE2_RS12940 a47b36858e8be78028b69d76276da0b4 184 PANTHER PTHR13696:SF62 11 182 1.7E-32 T 19-04-2016 ALIDE2_RS22225 83db9d94ca877d7520d9e6b66b829445 165 SUPERFAMILY SSF52255 3 157 1.1E-63 T 19-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 ALIDE2_RS22225 83db9d94ca877d7520d9e6b66b829445 165 SMART SM01001 4 155 2.1E-96 T 19-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 ALIDE2_RS22225 83db9d94ca877d7520d9e6b66b829445 165 PANTHER PTHR23046:SF2 1 152 1.5E-77 T 19-04-2016 ALIDE2_RS22225 83db9d94ca877d7520d9e6b66b829445 165 PIRSF PIRSF001338 1 159 9.0E-64 T 19-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 ALIDE2_RS22225 83db9d94ca877d7520d9e6b66b829445 165 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 159 30.987 T 19-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 ALIDE2_RS22225 83db9d94ca877d7520d9e6b66b829445 165 Pfam PF00731 AIR carboxylase 5 152 1.8E-62 T 19-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 ALIDE2_RS22225 83db9d94ca877d7520d9e6b66b829445 165 Gene3D G3DSA:3.40.50.7700 3 156 1.2E-71 T 19-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 ALIDE2_RS22225 83db9d94ca877d7520d9e6b66b829445 165 PANTHER PTHR23046 1 152 1.5E-77 T 19-04-2016 ALIDE2_RS22225 83db9d94ca877d7520d9e6b66b829445 165 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 154 7.3E-62 T 19-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 ALIDE2_RS00950 8558800f69b8210bee48ac454d96c2a8 430 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 195 427 4.2E-75 T 19-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS00950 8558800f69b8210bee48ac454d96c2a8 430 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 49 177 7.9E-54 T 19-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS00950 8558800f69b8210bee48ac454d96c2a8 430 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 114 127 - T 19-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS00950 8558800f69b8210bee48ac454d96c2a8 430 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 355 366 3.9E-32 T 19-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS00950 8558800f69b8210bee48ac454d96c2a8 430 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 228 248 3.9E-32 T 19-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS00950 8558800f69b8210bee48ac454d96c2a8 430 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 106 120 3.9E-32 T 19-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS00950 8558800f69b8210bee48ac454d96c2a8 430 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 186 208 3.9E-32 T 19-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS00950 8558800f69b8210bee48ac454d96c2a8 430 Gene3D G3DSA:3.40.50.720 195 429 2.3E-84 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00950 8558800f69b8210bee48ac454d96c2a8 430 PIRSF PIRSF000185 23 430 5.5E-162 T 19-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 ALIDE2_RS00950 8558800f69b8210bee48ac454d96c2a8 430 SMART SM00839 197 427 1.2E-101 T 19-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 ALIDE2_RS00950 8558800f69b8210bee48ac454d96c2a8 430 SUPERFAMILY SSF53223 12 197 7.04E-68 T 19-04-2016 ALIDE2_RS00950 8558800f69b8210bee48ac454d96c2a8 430 Gene3D G3DSA:3.40.192.10 53 193 9.0E-57 T 19-04-2016 ALIDE2_RS00950 8558800f69b8210bee48ac454d96c2a8 430 SUPERFAMILY SSF51735 195 429 2.85E-79 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00950 8558800f69b8210bee48ac454d96c2a8 430 PANTHER PTHR11606 44 428 1.0E-181 T 19-04-2016 ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 Pfam PF11880 Domain of unknown function (DUF3400) 1258 1305 5.8E-23 T 19-04-2016 IPR021817 Protein of unknown function DUF3400 ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 Pfam PF02754 Cysteine-rich domain 1043 1132 1.5E-6 T 19-04-2016 IPR004017 Cysteine-rich domain ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 Pfam PF02754 Cysteine-rich domain 1166 1255 5.7E-4 T 19-04-2016 IPR004017 Cysteine-rich domain ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 SUPERFAMILY SSF55103 443 580 7.57E-40 T 19-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 SUPERFAMILY SSF55103 692 773 7.57E-40 T 19-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 Gene3D G3DSA:3.30.43.10 146 302 5.7E-31 T 19-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 Pfam PF01565 FAD binding domain 186 331 6.4E-22 T 19-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 Pfam PF13183 4Fe-4S dicluster domain 834 913 3.5E-7 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 PANTHER PTHR11748 596 773 9.1E-32 T 19-04-2016 ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 PANTHER PTHR11748 149 334 9.1E-32 T 19-04-2016 ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 PANTHER PTHR11748 397 472 9.1E-32 T 19-04-2016 ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 Gene3D G3DSA:1.10.1060.10 832 933 1.7E-14 T 19-04-2016 ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 Pfam PF12447 Protein of unknown function (DUF3683) 19 136 4.5E-51 T 19-04-2016 IPR022153 Protein of unknown function DUF3683 ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 SUPERFAMILY SSF56176 151 414 4.05E-53 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 Pfam PF02913 FAD linked oxidases, C-terminal domain 443 567 3.3E-6 T 19-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 Pfam PF02913 FAD linked oxidases, C-terminal domain 684 772 1.3E-17 T 19-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ALIDE2_RS04555 e1dc4133a122382dac4a692091a91938 1305 SUPERFAMILY SSF46548 810 929 7.59E-14 T 19-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 ALIDE2_RS20400 a39742e6f67b53eb5beae151dee72fbb 399 Pfam PF02803 Thiolase, C-terminal domain 272 397 2.1E-43 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS20400 a39742e6f67b53eb5beae151dee72fbb 399 SUPERFAMILY SSF53901 273 398 3.84E-39 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS20400 a39742e6f67b53eb5beae151dee72fbb 399 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 19-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 ALIDE2_RS20400 a39742e6f67b53eb5beae151dee72fbb 399 PIRSF PIRSF000429 1 399 2.5E-110 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS20400 a39742e6f67b53eb5beae151dee72fbb 399 Gene3D G3DSA:3.40.47.10 4 125 6.9E-54 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS20400 a39742e6f67b53eb5beae151dee72fbb 399 Gene3D G3DSA:3.40.47.10 186 276 6.9E-54 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS20400 a39742e6f67b53eb5beae151dee72fbb 399 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 19-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 ALIDE2_RS20400 a39742e6f67b53eb5beae151dee72fbb 399 Pfam PF00108 Thiolase, N-terminal domain 5 263 4.0E-55 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS20400 a39742e6f67b53eb5beae151dee72fbb 399 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 397 7.8E-117 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS20400 a39742e6f67b53eb5beae151dee72fbb 399 Gene3D G3DSA:3.40.47.10 278 397 1.4E-60 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS20400 a39742e6f67b53eb5beae151dee72fbb 399 Gene3D G3DSA:3.40.47.10 146 185 1.4E-60 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS20400 a39742e6f67b53eb5beae151dee72fbb 399 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 19-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 ALIDE2_RS20400 a39742e6f67b53eb5beae151dee72fbb 399 SUPERFAMILY SSF53901 1 268 3.59E-65 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS20400 a39742e6f67b53eb5beae151dee72fbb 399 PANTHER PTHR18919:SF14 1 399 2.6E-219 T 19-04-2016 ALIDE2_RS20400 a39742e6f67b53eb5beae151dee72fbb 399 PANTHER PTHR18919 1 399 2.6E-219 T 19-04-2016 ALIDE2_RS05890 d913549a471842492e619636d57dc26a 415 SUPERFAMILY SSF63882 12 185 9.81E-50 T 19-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS05890 d913549a471842492e619636d57dc26a 415 Pfam PF03453 MoeA N-terminal region (domain I and II) 16 176 5.0E-36 T 19-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS05890 d913549a471842492e619636d57dc26a 415 Gene3D G3DSA:2.170.190.11 57 139 2.7E-28 T 19-04-2016 ALIDE2_RS05890 d913549a471842492e619636d57dc26a 415 Gene3D G3DSA:2.40.340.10 344 410 5.7E-11 T 19-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS05890 d913549a471842492e619636d57dc26a 415 SUPERFAMILY SSF63867 340 410 5.36E-15 T 19-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS05890 d913549a471842492e619636d57dc26a 415 Gene3D G3DSA:3.90.105.10 140 171 1.1E-20 T 19-04-2016 ALIDE2_RS05890 d913549a471842492e619636d57dc26a 415 PANTHER PTHR10192:SF17 10 414 2.3E-144 T 19-04-2016 ALIDE2_RS05890 d913549a471842492e619636d57dc26a 415 SUPERFAMILY SSF53218 186 335 1.57E-43 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS05890 d913549a471842492e619636d57dc26a 415 Gene3D G3DSA:3.40.980.10 172 343 6.6E-65 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS05890 d913549a471842492e619636d57dc26a 415 PANTHER PTHR10192 10 414 2.3E-144 T 19-04-2016 ALIDE2_RS05890 d913549a471842492e619636d57dc26a 415 SMART SM00852 189 330 8.6E-49 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS05890 d913549a471842492e619636d57dc26a 415 Pfam PF03454 MoeA C-terminal region (domain IV) 344 410 3.1E-10 T 19-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS05890 d913549a471842492e619636d57dc26a 415 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 186 326 2.1E-29 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS05890 d913549a471842492e619636d57dc26a 415 Pfam PF00994 Probable molybdopterin binding domain 190 328 1.5E-26 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS09630 96d28296838157dace3d3cc06ce258e3 495 PANTHER PTHR30203 4 493 2.0E-63 T 19-04-2016 ALIDE2_RS09630 96d28296838157dace3d3cc06ce258e3 495 SUPERFAMILY SSF56954 18 46 4.58E-87 T 19-04-2016 ALIDE2_RS09630 96d28296838157dace3d3cc06ce258e3 495 SUPERFAMILY SSF56954 83 493 4.58E-87 T 19-04-2016 ALIDE2_RS09630 96d28296838157dace3d3cc06ce258e3 495 PANTHER PTHR30203:SF3 4 493 2.0E-63 T 19-04-2016 ALIDE2_RS09630 96d28296838157dace3d3cc06ce258e3 495 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 29 493 7.2E-108 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 ALIDE2_RS09630 96d28296838157dace3d3cc06ce258e3 495 Gene3D G3DSA:1.20.1600.10 81 493 5.3E-85 T 19-04-2016 ALIDE2_RS09630 96d28296838157dace3d3cc06ce258e3 495 Pfam PF02321 Outer membrane efflux protein 92 283 1.6E-12 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS09630 96d28296838157dace3d3cc06ce258e3 495 Pfam PF02321 Outer membrane efflux protein 314 491 2.1E-22 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS09430 de77316451164b0a7b1ce7bbfd9ed4fb 109 SMART SM00418 9 89 8.2E-7 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS09430 de77316451164b0a7b1ce7bbfd9ed4fb 109 PANTHER PTHR33154 1 101 7.1E-21 T 19-04-2016 ALIDE2_RS09430 de77316451164b0a7b1ce7bbfd9ed4fb 109 Pfam PF12840 Helix-turn-helix domain 10 69 1.8E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS09430 de77316451164b0a7b1ce7bbfd9ed4fb 109 PANTHER PTHR33154:SF5 1 101 7.1E-21 T 19-04-2016 ALIDE2_RS09430 de77316451164b0a7b1ce7bbfd9ed4fb 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 5.2E-6 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS09430 de77316451164b0a7b1ce7bbfd9ed4fb 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 5.2E-6 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS09430 de77316451164b0a7b1ce7bbfd9ed4fb 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 5.2E-6 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS09430 de77316451164b0a7b1ce7bbfd9ed4fb 109 SUPERFAMILY SSF46785 3 93 2.19E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS09430 de77316451164b0a7b1ce7bbfd9ed4fb 109 Gene3D G3DSA:1.10.10.10 2 94 6.0E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 38 673 4.6E-198 T 19-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 Pfam PF08264 Anticodon-binding domain of tRNA 717 866 2.2E-25 T 19-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 SUPERFAMILY SSF47323 684 941 1.7E-73 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 PANTHER PTHR11946:SF11 456 916 0.0 T 19-04-2016 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 PANTHER PTHR11946:SF11 289 440 0.0 T 19-04-2016 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 PANTHER PTHR11946:SF11 16 222 0.0 T 19-04-2016 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 PANTHER PTHR11946:SF11 241 266 0.0 T 19-04-2016 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 Pfam PF06827 Zinc finger found in FPG and IleRS 912 938 1.7E-7 T 19-04-2016 IPR010663 Zinc finger, FPG/IleRS-type ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 12 942 20.094 T 19-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 PANTHER PTHR11946 456 916 0.0 T 19-04-2016 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 PANTHER PTHR11946 289 440 0.0 T 19-04-2016 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 PANTHER PTHR11946 16 222 0.0 T 19-04-2016 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 PANTHER PTHR11946 241 266 0.0 T 19-04-2016 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 68 79 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 SUPERFAMILY SSF52374 417 680 1.58E-127 T 19-04-2016 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 SUPERFAMILY SSF52374 14 209 1.58E-127 T 19-04-2016 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 Gene3D G3DSA:1.10.730.10 673 851 1.5E-40 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 Gene3D G3DSA:3.90.740.10 213 403 3.8E-46 T 19-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 25 868 3.7E-252 T 19-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 61 72 3.4E-31 T 19-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 554 567 3.4E-31 T 19-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 593 602 3.4E-31 T 19-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 245 268 3.4E-31 T 19-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 415 430 3.4E-31 T 19-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 SUPERFAMILY SSF50677 211 417 9.52E-43 T 19-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 Gene3D G3DSA:3.40.50.620 27 212 2.3E-126 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS18435 8ef8497c7e04732553deee9afe8f478d 951 Gene3D G3DSA:3.40.50.620 417 670 2.3E-126 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS20365 f0482f81ce77af3daed564b653add037 324 PANTHER PTHR32332:SF22 1 322 1.2E-188 T 19-04-2016 ALIDE2_RS20365 f0482f81ce77af3daed564b653add037 324 PANTHER PTHR32332 1 322 1.2E-188 T 19-04-2016 ALIDE2_RS20365 f0482f81ce77af3daed564b653add037 324 SUPERFAMILY SSF51412 1 315 7.85E-71 T 19-04-2016 ALIDE2_RS20365 f0482f81ce77af3daed564b653add037 324 Pfam PF03060 Nitronate monooxygenase 3 308 1.2E-62 T 19-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ALIDE2_RS20365 f0482f81ce77af3daed564b653add037 324 Gene3D G3DSA:3.20.20.70 1 304 5.5E-78 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS20160 57d073d8106734816a272fedd9ffa57e 308 Gene3D G3DSA:1.10.150.170 111 214 1.2E-33 T 19-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS20160 57d073d8106734816a272fedd9ffa57e 308 PANTHER PTHR11265:SF0 7 306 1.7E-122 T 19-04-2016 ALIDE2_RS20160 57d073d8106734816a272fedd9ffa57e 308 SUPERFAMILY SSF53335 212 304 2.66E-40 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS20160 57d073d8106734816a272fedd9ffa57e 308 SUPERFAMILY SSF53335 7 111 2.66E-40 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS20160 57d073d8106734816a272fedd9ffa57e 308 Gene3D G3DSA:3.40.50.150 7 108 1.9E-44 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS20160 57d073d8106734816a272fedd9ffa57e 308 Gene3D G3DSA:3.40.50.150 215 304 1.9E-44 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS20160 57d073d8106734816a272fedd9ffa57e 308 PIRSF PIRSF004486 2 305 4.7E-90 T 19-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS20160 57d073d8106734816a272fedd9ffa57e 308 Pfam PF01795 MraW methylase family 5 303 2.6E-89 T 19-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS20160 57d073d8106734816a272fedd9ffa57e 308 SUPERFAMILY SSF81799 112 212 6.8E-31 T 19-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS20160 57d073d8106734816a272fedd9ffa57e 308 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 6 303 1.1E-90 T 19-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS20160 57d073d8106734816a272fedd9ffa57e 308 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 304 35.304 T 19-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS20160 57d073d8106734816a272fedd9ffa57e 308 PANTHER PTHR11265 7 306 1.7E-122 T 19-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS02860 5964170c8ca7a2c4efec586895768cb4 190 Gene3D G3DSA:3.40.50.10420 2 188 8.6E-44 T 19-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain ALIDE2_RS02860 5964170c8ca7a2c4efec586895768cb4 190 PANTHER PTHR23407 1 189 3.1E-26 T 19-04-2016 ALIDE2_RS02860 5964170c8ca7a2c4efec586895768cb4 190 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 181 6.2E-34 T 19-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase ALIDE2_RS02860 5964170c8ca7a2c4efec586895768cb4 190 SUPERFAMILY SSF100950 1 188 1.95E-41 T 19-04-2016 ALIDE2_RS02860 5964170c8ca7a2c4efec586895768cb4 190 PIRSF PIRSF006806 1 186 3.3E-26 T 19-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase ALIDE2_RS02860 5964170c8ca7a2c4efec586895768cb4 190 PANTHER PTHR23407:SF1 1 189 3.1E-26 T 19-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase ALIDE2_RS02860 5964170c8ca7a2c4efec586895768cb4 190 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 181 4.5E-22 T 19-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase ALIDE2_RS17990 137482ba50dc149831d3aedabb8e9bef 247 Gene3D G3DSA:3.40.50.2300 1 123 2.0E-30 T 19-04-2016 ALIDE2_RS17990 137482ba50dc149831d3aedabb8e9bef 247 SMART SM00448 1 115 8.2E-28 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS17990 137482ba50dc149831d3aedabb8e9bef 247 PANTHER PTHR26402 1 133 3.3E-27 T 19-04-2016 ALIDE2_RS17990 137482ba50dc149831d3aedabb8e9bef 247 PANTHER PTHR26402 209 247 3.3E-27 T 19-04-2016 ALIDE2_RS17990 137482ba50dc149831d3aedabb8e9bef 247 Gene3D G3DSA:2.40.50.40 138 200 5.7E-14 T 19-04-2016 ALIDE2_RS17990 137482ba50dc149831d3aedabb8e9bef 247 SUPERFAMILY SSF52172 1 122 2.28E-30 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS17990 137482ba50dc149831d3aedabb8e9bef 247 Pfam PF04397 LytTr DNA-binding domain 146 245 2.5E-21 T 19-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 ALIDE2_RS17990 137482ba50dc149831d3aedabb8e9bef 247 Pfam PF00072 Response regulator receiver domain 3 115 5.0E-23 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS17990 137482ba50dc149831d3aedabb8e9bef 247 SMART SM00850 145 246 5.2E-29 T 19-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 ALIDE2_RS15785 aa0a32fa765c598d0cf3e5b3bda26d2f 533 Pfam PF02626 Allophanate hydrolase subunit 2 258 523 7.2E-83 T 19-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B ALIDE2_RS15785 aa0a32fa765c598d0cf3e5b3bda26d2f 533 SMART SM00797 256 533 1.5E-109 T 19-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B ALIDE2_RS15785 aa0a32fa765c598d0cf3e5b3bda26d2f 533 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 235 531 3.1E-70 T 19-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B ALIDE2_RS15785 aa0a32fa765c598d0cf3e5b3bda26d2f 533 Pfam PF02682 Allophanate hydrolase subunit 1 1 191 1.5E-66 T 19-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D ALIDE2_RS15785 aa0a32fa765c598d0cf3e5b3bda26d2f 533 PANTHER PTHR34698:SF2 1 202 2.1E-72 T 19-04-2016 ALIDE2_RS15785 aa0a32fa765c598d0cf3e5b3bda26d2f 533 Gene3D G3DSA:3.30.1360.40 2 66 1.6E-9 T 19-04-2016 IPR024946 Arginine repressor C-terminal-like domain ALIDE2_RS15785 aa0a32fa765c598d0cf3e5b3bda26d2f 533 SUPERFAMILY SSF50891 80 202 2.43E-41 T 19-04-2016 IPR029000 Cyclophilin-like domain ALIDE2_RS15785 aa0a32fa765c598d0cf3e5b3bda26d2f 533 SUPERFAMILY SSF50891 413 529 3.64E-18 T 19-04-2016 IPR029000 Cyclophilin-like domain ALIDE2_RS15785 aa0a32fa765c598d0cf3e5b3bda26d2f 533 PANTHER PTHR34698 1 202 2.1E-72 T 19-04-2016 ALIDE2_RS15785 aa0a32fa765c598d0cf3e5b3bda26d2f 533 Gene3D G3DSA:2.40.100.10 80 203 8.3E-49 T 19-04-2016 IPR029000 Cyclophilin-like domain ALIDE2_RS15785 aa0a32fa765c598d0cf3e5b3bda26d2f 533 Gene3D G3DSA:2.40.100.10 413 530 9.8E-14 T 19-04-2016 IPR029000 Cyclophilin-like domain ALIDE2_RS15785 aa0a32fa765c598d0cf3e5b3bda26d2f 533 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 22 200 1.4E-43 T 19-04-2016 IPR010016 KipI family ALIDE2_RS15785 aa0a32fa765c598d0cf3e5b3bda26d2f 533 SUPERFAMILY SSF160467 2 84 6.02E-12 T 19-04-2016 ALIDE2_RS15785 aa0a32fa765c598d0cf3e5b3bda26d2f 533 SMART SM00796 1 191 1.0E-91 T 19-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D ALIDE2_RS18320 322f18716a2eaf135c8a30cf38e7819c 260 PANTHER PTHR24220 132 258 4.8E-110 T 19-04-2016 ALIDE2_RS18320 322f18716a2eaf135c8a30cf38e7819c 260 PANTHER PTHR24220 11 116 4.8E-110 T 19-04-2016 ALIDE2_RS18320 322f18716a2eaf135c8a30cf38e7819c 260 PANTHER PTHR24220:SF358 132 258 4.8E-110 T 19-04-2016 ALIDE2_RS18320 322f18716a2eaf135c8a30cf38e7819c 260 PANTHER PTHR24220:SF358 11 116 4.8E-110 T 19-04-2016 ALIDE2_RS18320 322f18716a2eaf135c8a30cf38e7819c 260 Gene3D G3DSA:3.40.50.300 6 254 3.2E-68 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18320 322f18716a2eaf135c8a30cf38e7819c 260 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS18320 322f18716a2eaf135c8a30cf38e7819c 260 SMART SM00382 34 242 1.7E-5 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS18320 322f18716a2eaf135c8a30cf38e7819c 260 SUPERFAMILY SSF52540 9 255 2.15E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18320 322f18716a2eaf135c8a30cf38e7819c 260 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 236 256 5.3E-12 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALIDE2_RS18320 322f18716a2eaf135c8a30cf38e7819c 260 Pfam PF00005 ABC transporter 25 185 1.7E-29 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 SMART SM00388 242 308 3.5E-14 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 SMART SM00387 351 463 3.2E-33 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 SUPERFAMILY SSF47384 225 308 5.89E-16 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 SUPERFAMILY SSF55874 297 463 1.44E-34 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 PANTHER PTHR24423:SF354 182 460 6.2E-93 T 19-04-2016 ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 10 460 2.0E-137 T 19-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 Pfam PF00672 HAMP domain 169 238 1.0E-12 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 PANTHER PTHR24423 59 139 6.2E-93 T 19-04-2016 ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 SMART SM00304 188 241 7.9E-7 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 PANTHER PTHR24423 182 460 6.2E-93 T 19-04-2016 ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 308 1.2E-11 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 461 3.6E-19 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 Gene3D G3DSA:1.10.287.130 232 304 2.2E-9 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 PANTHER PTHR24423:SF354 59 139 6.2E-93 T 19-04-2016 ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 Gene3D G3DSA:3.30.565.10 326 464 5.4E-36 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 416 9.8E-11 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 9.8E-11 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 9.8E-11 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS10880 802ce05215bd398c3c9849ad9782035c 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 9.8E-11 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS09535 5239866b223855f030091063b0946faa 188 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 84 187 7.8E-42 T 19-04-2016 IPR021300 Integrating conjugative element protein, PFL4695 ALIDE2_RS09535 5239866b223855f030091063b0946faa 188 Pfam PF11072 Protein of unknown function (DUF2859) 36 186 3.2E-55 T 19-04-2016 IPR021300 Integrating conjugative element protein, PFL4695 ALIDE2_RS11240 4836d087b9aae106498bcb6ba8e63e74 154 SUPERFAMILY SSF52121 11 153 3.79E-52 T 19-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 ALIDE2_RS11240 4836d087b9aae106498bcb6ba8e63e74 154 Gene3D G3DSA:3.40.50.960 9 151 1.6E-53 T 19-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 ALIDE2_RS11240 4836d087b9aae106498bcb6ba8e63e74 154 PANTHER PTHR21058 1 153 3.4E-55 T 19-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 ALIDE2_RS11240 4836d087b9aae106498bcb6ba8e63e74 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 16 150 6.4E-48 T 19-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 ALIDE2_RS11240 4836d087b9aae106498bcb6ba8e63e74 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 12 153 27.02 T 19-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 ALIDE2_RS11240 4836d087b9aae106498bcb6ba8e63e74 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 18 149 3.1E-41 T 19-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 ALIDE2_RS07070 6091ec1191084de91c34278c99ee5db5 458 Pfam PF01145 SPFH domain / Band 7 family 133 320 1.4E-27 T 19-04-2016 IPR001107 Band 7 domain ALIDE2_RS07070 6091ec1191084de91c34278c99ee5db5 458 Pfam PF12221 Bacterial membrane protein N terminal 21 87 5.1E-8 T 19-04-2016 IPR020980 Menbrane protein HflK, N-terminal ALIDE2_RS07070 6091ec1191084de91c34278c99ee5db5 458 SMART SM00244 129 304 1.3E-26 T 19-04-2016 IPR001107 Band 7 domain ALIDE2_RS07070 6091ec1191084de91c34278c99ee5db5 458 SUPERFAMILY SSF117892 191 311 4.18E-20 T 19-04-2016 IPR001107 Band 7 domain ALIDE2_RS07070 6091ec1191084de91c34278c99ee5db5 458 PANTHER PTHR10264 39 446 3.9E-112 T 19-04-2016 IPR001972 Stomatin family GO:0016020 ALIDE2_RS07070 6091ec1191084de91c34278c99ee5db5 458 TIGRFAM TIGR01933 hflK: HflK protein 131 406 3.8E-89 T 19-04-2016 IPR010201 HflK GO:0016021 ALIDE2_RS07070 6091ec1191084de91c34278c99ee5db5 458 PANTHER PTHR10264:SF51 39 446 3.9E-112 T 19-04-2016 IPR010201 HflK GO:0016021 ALIDE2_RS20090 05b67b8a0ad5d42b583ac179a6930221 399 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 21 133 6.3E-11 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS20090 05b67b8a0ad5d42b583ac179a6930221 399 PANTHER PTHR10909 11 394 2.5E-130 T 19-04-2016 ALIDE2_RS20090 05b67b8a0ad5d42b583ac179a6930221 399 PANTHER PTHR10909:SF305 11 394 2.5E-130 T 19-04-2016 ALIDE2_RS20090 05b67b8a0ad5d42b583ac179a6930221 399 SUPERFAMILY SSF47203 242 395 5.15E-48 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS20090 05b67b8a0ad5d42b583ac179a6930221 399 Gene3D G3DSA:2.40.110.10 137 232 3.2E-34 T 19-04-2016 ALIDE2_RS20090 05b67b8a0ad5d42b583ac179a6930221 399 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 392 2.5E-43 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS20090 05b67b8a0ad5d42b583ac179a6930221 399 Gene3D G3DSA:1.20.140.10 233 394 5.1E-56 T 19-04-2016 ALIDE2_RS20090 05b67b8a0ad5d42b583ac179a6930221 399 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 138 231 4.4E-22 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS20090 05b67b8a0ad5d42b583ac179a6930221 399 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 140 152 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS20090 05b67b8a0ad5d42b583ac179a6930221 399 Gene3D G3DSA:1.10.540.10 18 136 1.1E-15 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS20090 05b67b8a0ad5d42b583ac179a6930221 399 SUPERFAMILY SSF56645 18 254 8.64E-59 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS05130 2c28887f4fb409e80a72adde5ef3efc5 405 TIGRFAM TIGR00843 benE: benzoate transporter 18 389 1.2E-114 T 19-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ALIDE2_RS05130 2c28887f4fb409e80a72adde5ef3efc5 405 PANTHER PTHR30199 17 399 4.6E-129 T 19-04-2016 ALIDE2_RS05130 2c28887f4fb409e80a72adde5ef3efc5 405 PANTHER PTHR30199:SF0 17 399 4.6E-129 T 19-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ALIDE2_RS05130 2c28887f4fb409e80a72adde5ef3efc5 405 Pfam PF03594 Benzoate membrane transport protein 18 388 4.0E-134 T 19-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ALIDE2_RS17850 7752beebb177ad875493d4e2beb072af 548 Gene3D G3DSA:3.30.300.30 442 539 5.0E-32 T 19-04-2016 ALIDE2_RS17850 7752beebb177ad875493d4e2beb072af 548 Gene3D G3DSA:3.40.50.980 200 343 1.9E-26 T 19-04-2016 ALIDE2_RS17850 7752beebb177ad875493d4e2beb072af 548 PANTHER PTHR24095 1 540 3.9E-267 T 19-04-2016 ALIDE2_RS17850 7752beebb177ad875493d4e2beb072af 548 SUPERFAMILY SSF56801 15 540 7.46E-139 T 19-04-2016 ALIDE2_RS17850 7752beebb177ad875493d4e2beb072af 548 Pfam PF13193 AMP-binding enzyme C-terminal domain 456 530 1.8E-21 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS17850 7752beebb177ad875493d4e2beb072af 548 PANTHER PTHR24095:SF169 1 540 3.9E-267 T 19-04-2016 ALIDE2_RS17850 7752beebb177ad875493d4e2beb072af 548 Gene3D G3DSA:2.30.38.10 373 441 6.3E-18 T 19-04-2016 ALIDE2_RS17850 7752beebb177ad875493d4e2beb072af 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 190 201 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS17850 7752beebb177ad875493d4e2beb072af 548 Pfam PF00501 AMP-binding enzyme 26 447 3.4E-89 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS17850 7752beebb177ad875493d4e2beb072af 548 Gene3D G3DSA:3.40.50.980 175 199 1.6E-35 T 19-04-2016 ALIDE2_RS17850 7752beebb177ad875493d4e2beb072af 548 Gene3D G3DSA:3.40.50.980 23 132 1.6E-35 T 19-04-2016 ALIDE2_RS11090 590853c35ce5320a6a29bfa89415ffa4 304 PANTHER PTHR22908 12 300 5.7E-82 T 19-04-2016 ALIDE2_RS11090 590853c35ce5320a6a29bfa89415ffa4 304 SUPERFAMILY SSF52540 29 87 2.24E-35 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11090 590853c35ce5320a6a29bfa89415ffa4 304 SUPERFAMILY SSF52540 117 277 2.24E-35 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11090 590853c35ce5320a6a29bfa89415ffa4 304 Pfam PF07728 AAA domain (dynein-related subfamily) 44 195 3.2E-13 T 19-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 ALIDE2_RS11090 590853c35ce5320a6a29bfa89415ffa4 304 SMART SM00382 41 202 2.8E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS11090 590853c35ce5320a6a29bfa89415ffa4 304 PANTHER PTHR22908:SF67 12 300 5.7E-82 T 19-04-2016 ALIDE2_RS11090 590853c35ce5320a6a29bfa89415ffa4 304 Gene3D G3DSA:3.40.50.300 33 227 1.3E-29 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01075 a5962737add8a359e4a0e56ed1b391e1 462 PANTHER PTHR11730 33 460 3.3E-184 T 19-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 ALIDE2_RS01075 a5962737add8a359e4a0e56ed1b391e1 462 SUPERFAMILY SSF111352 57 441 3.01E-126 T 19-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 ALIDE2_RS01075 a5962737add8a359e4a0e56ed1b391e1 462 TIGRFAM TIGR00836 amt: ammonium transporter 61 460 5.7E-134 T 19-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 ALIDE2_RS01075 a5962737add8a359e4a0e56ed1b391e1 462 PANTHER PTHR11730:SF17 33 460 3.3E-184 T 19-04-2016 ALIDE2_RS01075 a5962737add8a359e4a0e56ed1b391e1 462 ProSitePatterns PS01219 Ammonium transporters signature. 214 239 - T 19-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 ALIDE2_RS01075 a5962737add8a359e4a0e56ed1b391e1 462 Pfam PF00909 Ammonium Transporter Family 63 460 8.1E-121 T 19-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 ALIDE2_RS01075 a5962737add8a359e4a0e56ed1b391e1 462 Gene3D G3DSA:1.10.3430.10 57 441 1.4E-139 T 19-04-2016 IPR029020 Ammonium/urea transporter ALIDE2_RS01075 a5962737add8a359e4a0e56ed1b391e1 462 PRINTS PR00342 Rhesus blood group protein signature 284 306 1.1E-9 T 19-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ALIDE2_RS01075 a5962737add8a359e4a0e56ed1b391e1 462 PRINTS PR00342 Rhesus blood group protein signature 253 271 1.1E-9 T 19-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ALIDE2_RS01075 a5962737add8a359e4a0e56ed1b391e1 462 PRINTS PR00342 Rhesus blood group protein signature 339 357 1.1E-9 T 19-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ALIDE2_RS01075 a5962737add8a359e4a0e56ed1b391e1 462 PRINTS PR00342 Rhesus blood group protein signature 158 174 1.1E-9 T 19-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ALIDE2_RS08055 d2b8338e98d1f70e6b13da46efc09551 116 Pfam PF11171 Protein of unknown function (DUF2958) 5 115 2.3E-49 T 19-04-2016 IPR021341 Protein of unknown function DUF2958 ALIDE2_RS11010 f12d28a1a074cfd785d898d5273c3d06 121 PIRSF PIRSF000169 6 121 2.4E-32 T 19-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 ALIDE2_RS11010 f12d28a1a074cfd785d898d5273c3d06 121 PANTHER PTHR38689 17 121 4.9E-21 T 19-04-2016 ALIDE2_RS11010 f12d28a1a074cfd785d898d5273c3d06 121 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 91 1.6E-9 T 19-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 ALIDE2_RS11010 f12d28a1a074cfd785d898d5273c3d06 121 SUPERFAMILY SSF81343 9 121 3.92E-25 T 19-04-2016 ALIDE2_RS11010 f12d28a1a074cfd785d898d5273c3d06 121 PANTHER PTHR38689:SF1 17 121 4.9E-21 T 19-04-2016 ALIDE2_RS11010 f12d28a1a074cfd785d898d5273c3d06 121 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 14 119 7.7E-29 T 19-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 ALIDE2_RS11010 f12d28a1a074cfd785d898d5273c3d06 121 Gene3D G3DSA:1.20.1300.10 8 120 5.8E-29 T 19-04-2016 ALIDE2_RS11345 29b80cf6bb815cf2cd3f938dbfb9c196 291 Pfam PF00892 EamA-like transporter family 4 140 1.8E-6 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS11345 29b80cf6bb815cf2cd3f938dbfb9c196 291 SUPERFAMILY SSF103481 184 283 1.44E-6 T 19-04-2016 ALIDE2_RS11345 29b80cf6bb815cf2cd3f938dbfb9c196 291 PANTHER PTHR22911:SF57 1 290 1.1E-89 T 19-04-2016 ALIDE2_RS11345 29b80cf6bb815cf2cd3f938dbfb9c196 291 SUPERFAMILY SSF103481 36 143 1.18E-7 T 19-04-2016 ALIDE2_RS11345 29b80cf6bb815cf2cd3f938dbfb9c196 291 PANTHER PTHR22911 1 290 1.1E-89 T 19-04-2016 ALIDE2_RS11345 29b80cf6bb815cf2cd3f938dbfb9c196 291 TIGRFAM TIGR00688 rarD: protein RarD 2 256 1.4E-58 T 19-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 Gene3D G3DSA:3.30.70.1430 554 650 1.2E-6 T 19-04-2016 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 Gene3D G3DSA:1.10.3850.10 274 495 4.8E-61 T 19-04-2016 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 Gene3D G3DSA:1.10.3850.10 800 1015 2.2E-56 T 19-04-2016 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.1E-33 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.1E-33 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 1.1E-33 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 1.1E-33 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.1E-33 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.1E-33 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 1.1E-33 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 Gene3D G3DSA:3.30.2090.10 180 262 3.9E-16 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 Gene3D G3DSA:3.30.2090.10 710 796 1.8E-15 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 SUPERFAMILY SSF82714 180 262 8.5E-15 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 SUPERFAMILY SSF82693 266 323 5.23E-17 T 19-04-2016 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 SUPERFAMILY SSF82693 136 179 5.23E-17 T 19-04-2016 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 SUPERFAMILY SSF82866 290 494 1.06E-39 T 19-04-2016 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 SUPERFAMILY SSF82693 553 650 1.31E-9 T 19-04-2016 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 Gene3D G3DSA:3.30.70.1430 42 138 1.4E-19 T 19-04-2016 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 SUPERFAMILY SSF82866 793 1018 4.19E-52 T 19-04-2016 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 2 1018 0.0 T 19-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 PANTHER PTHR32063 1 1011 0.0 T 19-04-2016 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 PANTHER PTHR32063:SF24 1 1011 0.0 T 19-04-2016 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 SUPERFAMILY SSF82693 42 124 3.4E-17 T 19-04-2016 ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 SUPERFAMILY SSF82714 710 795 6.8E-16 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS00235 17d8c2f9e7c62de37aafa1e90246fef3 1031 Pfam PF00873 AcrB/AcrD/AcrF family 5 1012 1.7E-273 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS14860 2260da6b15b320bc0ef3859ce231949e 308 SMART SM00554 63 168 4.4E-21 T 19-04-2016 IPR000782 FAS1 domain ALIDE2_RS14860 2260da6b15b320bc0ef3859ce231949e 308 SMART SM00554 205 307 4.6E-19 T 19-04-2016 IPR000782 FAS1 domain ALIDE2_RS14860 2260da6b15b320bc0ef3859ce231949e 308 PANTHER PTHR10900 29 306 8.5E-71 T 19-04-2016 ALIDE2_RS14860 2260da6b15b320bc0ef3859ce231949e 308 SUPERFAMILY SSF82153 170 307 2.62E-32 T 19-04-2016 IPR000782 FAS1 domain ALIDE2_RS14860 2260da6b15b320bc0ef3859ce231949e 308 SUPERFAMILY SSF82153 28 170 8.11E-34 T 19-04-2016 IPR000782 FAS1 domain ALIDE2_RS14860 2260da6b15b320bc0ef3859ce231949e 308 Gene3D G3DSA:2.30.180.10 28 166 1.4E-34 T 19-04-2016 IPR000782 FAS1 domain ALIDE2_RS14860 2260da6b15b320bc0ef3859ce231949e 308 Gene3D G3DSA:2.30.180.10 170 304 1.0E-32 T 19-04-2016 IPR000782 FAS1 domain ALIDE2_RS14860 2260da6b15b320bc0ef3859ce231949e 308 Pfam PF02469 Fasciclin domain 180 306 9.4E-27 T 19-04-2016 IPR000782 FAS1 domain ALIDE2_RS14860 2260da6b15b320bc0ef3859ce231949e 308 Pfam PF02469 Fasciclin domain 39 167 1.8E-27 T 19-04-2016 IPR000782 FAS1 domain ALIDE2_RS00765 20a283dd8ba7f5e3f4bea44f270c26ed 305 Gene3D G3DSA:3.40.50.720 5 255 1.0E-67 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00765 20a283dd8ba7f5e3f4bea44f270c26ed 305 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 1.2E-40 T 19-04-2016 ALIDE2_RS00765 20a283dd8ba7f5e3f4bea44f270c26ed 305 PANTHER PTHR13078:SF55 1 297 4.7E-189 T 19-04-2016 ALIDE2_RS00765 20a283dd8ba7f5e3f4bea44f270c26ed 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 1.2E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00765 20a283dd8ba7f5e3f4bea44f270c26ed 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 1.2E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00765 20a283dd8ba7f5e3f4bea44f270c26ed 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 1.2E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00765 20a283dd8ba7f5e3f4bea44f270c26ed 305 SUPERFAMILY SSF51735 7 256 4.21E-64 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00765 20a283dd8ba7f5e3f4bea44f270c26ed 305 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS00765 20a283dd8ba7f5e3f4bea44f270c26ed 305 PANTHER PTHR13078 1 297 4.7E-189 T 19-04-2016 ALIDE2_RS00765 20a283dd8ba7f5e3f4bea44f270c26ed 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 4.4E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00765 20a283dd8ba7f5e3f4bea44f270c26ed 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.4E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00765 20a283dd8ba7f5e3f4bea44f270c26ed 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 4.4E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00765 20a283dd8ba7f5e3f4bea44f270c26ed 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 4.4E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00765 20a283dd8ba7f5e3f4bea44f270c26ed 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 4.4E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00765 20a283dd8ba7f5e3f4bea44f270c26ed 305 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 205 2.1E-7 T 19-04-2016 ALIDE2_RS14045 f87919f093bf8dc15cf06a87a13a884e 119 SUPERFAMILY SSF74731 2 116 7.33E-50 T 19-04-2016 ALIDE2_RS14045 f87919f093bf8dc15cf06a87a13a884e 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS14045 f87919f093bf8dc15cf06a87a13a884e 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.141 T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS14045 f87919f093bf8dc15cf06a87a13a884e 119 Pfam PF00453 Ribosomal protein L20 3 108 3.7E-49 T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS14045 f87919f093bf8dc15cf06a87a13a884e 119 PANTHER PTHR10986 2 117 5.9E-62 T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS14045 f87919f093bf8dc15cf06a87a13a884e 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.8E-40 T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS14045 f87919f093bf8dc15cf06a87a13a884e 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.8E-40 T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS14045 f87919f093bf8dc15cf06a87a13a884e 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.8E-40 T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS14045 f87919f093bf8dc15cf06a87a13a884e 119 Gene3D G3DSA:1.10.1900.20 55 117 7.3E-30 T 19-04-2016 ALIDE2_RS14045 f87919f093bf8dc15cf06a87a13a884e 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.0E-49 T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS14045 f87919f093bf8dc15cf06a87a13a884e 119 PANTHER PTHR10986:SF12 2 117 5.9E-62 T 19-04-2016 ALIDE2_RS14045 f87919f093bf8dc15cf06a87a13a884e 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 2.0E-21 T 19-04-2016 ALIDE2_RS18135 0cbde15de8fe7c8a4107d17934ab498c 268 SUPERFAMILY SSF161098 63 244 1.83E-19 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18135 0cbde15de8fe7c8a4107d17934ab498c 268 PANTHER PTHR30151 1 259 1.4E-41 T 19-04-2016 ALIDE2_RS18135 0cbde15de8fe7c8a4107d17934ab498c 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 242 1.2E-12 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18135 0cbde15de8fe7c8a4107d17934ab498c 268 Gene3D G3DSA:1.10.3720.10 62 243 2.0E-14 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 Pfam PF00183 Hsp90 protein 219 652 5.0E-129 T 19-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 SUPERFAMILY SSF55874 5 219 1.57E-61 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 PANTHER PTHR11528:SF44 2 382 0.0 T 19-04-2016 ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 PANTHER PTHR11528:SF44 405 653 0.0 T 19-04-2016 ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 653 32.351 T 19-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 SMART SM00387 26 187 0.0034 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 Gene3D G3DSA:3.30.565.10 5 249 9.5E-80 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 185 3.5E-13 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 SUPERFAMILY SSF54211 242 517 1.52E-95 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 24 33 - T 19-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 PANTHER PTHR11528 2 382 0.0 T 19-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 PANTHER PTHR11528 405 653 0.0 T 19-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 SUPERFAMILY SSF110942 544 652 6.28E-34 T 19-04-2016 ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 PIRSF PIRSF002583 1 653 2.0E-211 T 19-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 PRINTS PR00775 90kDa heat shock protein signature 92 109 2.2E-61 T 19-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 PRINTS PR00775 90kDa heat shock protein signature 193 211 2.2E-61 T 19-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 PRINTS PR00775 90kDa heat shock protein signature 74 91 2.2E-61 T 19-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 PRINTS PR00775 90kDa heat shock protein signature 175 192 2.2E-61 T 19-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 PRINTS PR00775 90kDa heat shock protein signature 123 145 2.2E-61 T 19-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 PRINTS PR00775 90kDa heat shock protein signature 25 47 2.2E-61 T 19-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal ALIDE2_RS02535 f27b2436f8314e5c7185dcc03c396026 653 PRINTS PR00775 90kDa heat shock protein signature 4 24 2.2E-61 T 19-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal ALIDE2_RS20990 84866780720b55a01f6907b4d6201049 381 Hamap MF_00416 Flagellar P-ring protein [flgI]. 17 381 37.301 T 19-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ALIDE2_RS20990 84866780720b55a01f6907b4d6201049 381 PRINTS PR01010 Flagellar P-ring protein signature 268 280 8.9E-79 T 19-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ALIDE2_RS20990 84866780720b55a01f6907b4d6201049 381 PRINTS PR01010 Flagellar P-ring protein signature 37 52 8.9E-79 T 19-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ALIDE2_RS20990 84866780720b55a01f6907b4d6201049 381 PRINTS PR01010 Flagellar P-ring protein signature 72 87 8.9E-79 T 19-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ALIDE2_RS20990 84866780720b55a01f6907b4d6201049 381 PRINTS PR01010 Flagellar P-ring protein signature 121 138 8.9E-79 T 19-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ALIDE2_RS20990 84866780720b55a01f6907b4d6201049 381 PRINTS PR01010 Flagellar P-ring protein signature 178 196 8.9E-79 T 19-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ALIDE2_RS20990 84866780720b55a01f6907b4d6201049 381 PRINTS PR01010 Flagellar P-ring protein signature 52 67 8.9E-79 T 19-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ALIDE2_RS20990 84866780720b55a01f6907b4d6201049 381 PRINTS PR01010 Flagellar P-ring protein signature 138 156 8.9E-79 T 19-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ALIDE2_RS20990 84866780720b55a01f6907b4d6201049 381 PRINTS PR01010 Flagellar P-ring protein signature 204 222 8.9E-79 T 19-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ALIDE2_RS20990 84866780720b55a01f6907b4d6201049 381 PRINTS PR01010 Flagellar P-ring protein signature 99 118 8.9E-79 T 19-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ALIDE2_RS20990 84866780720b55a01f6907b4d6201049 381 PANTHER PTHR30381:SF1 1 381 2.4E-172 T 19-04-2016 ALIDE2_RS20990 84866780720b55a01f6907b4d6201049 381 PANTHER PTHR30381 1 381 2.4E-172 T 19-04-2016 ALIDE2_RS20990 84866780720b55a01f6907b4d6201049 381 Pfam PF02119 Flagellar P-ring protein 37 380 2.6E-135 T 19-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ALIDE2_RS20645 ebda843089078f9f11ee676857ceba50 164 Gene3D G3DSA:3.30.240.20 85 154 2.3E-16 T 19-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain ALIDE2_RS20645 ebda843089078f9f11ee676857ceba50 164 PANTHER PTHR34582:SF6 8 153 8.7E-29 T 19-04-2016 ALIDE2_RS20645 ebda843089078f9f11ee676857ceba50 164 PANTHER PTHR34582 8 153 8.7E-29 T 19-04-2016 ALIDE2_RS20645 ebda843089078f9f11ee676857ceba50 164 Pfam PF04239 Protein of unknown function (DUF421) 92 154 2.3E-13 T 19-04-2016 IPR007353 Protein of unknown function DUF421 ALIDE2_RS04690 91511e59e8aaee3bbe0d61920b1d749e 287 Gene3D G3DSA:1.10.3720.10 75 281 7.2E-28 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS04690 91511e59e8aaee3bbe0d61920b1d749e 287 PANTHER PTHR30465 1 285 1.0E-103 T 19-04-2016 ALIDE2_RS04690 91511e59e8aaee3bbe0d61920b1d749e 287 PANTHER PTHR30465:SF10 1 285 1.0E-103 T 19-04-2016 ALIDE2_RS04690 91511e59e8aaee3bbe0d61920b1d749e 287 SUPERFAMILY SSF161098 78 265 1.09E-27 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS04690 91511e59e8aaee3bbe0d61920b1d749e 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 284 6.6E-34 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS03225 6929e97685b4c3b50341fc0aa8489269 315 SUPERFAMILY SSF46785 4 88 2.99E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS03225 6929e97685b4c3b50341fc0aa8489269 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.2E-16 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS03225 6929e97685b4c3b50341fc0aa8489269 315 SUPERFAMILY SSF53850 96 272 3.26E-21 T 19-04-2016 ALIDE2_RS03225 6929e97685b4c3b50341fc0aa8489269 315 Gene3D G3DSA:3.40.190.10 97 209 4.7E-7 T 19-04-2016 ALIDE2_RS03225 6929e97685b4c3b50341fc0aa8489269 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.1E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS03225 6929e97685b4c3b50341fc0aa8489269 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.1E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS03225 6929e97685b4c3b50341fc0aa8489269 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.1E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS03225 6929e97685b4c3b50341fc0aa8489269 315 Gene3D G3DSA:1.10.10.10 4 87 2.3E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS03225 6929e97685b4c3b50341fc0aa8489269 315 PANTHER PTHR30126 4 307 1.2E-82 T 19-04-2016 ALIDE2_RS03225 6929e97685b4c3b50341fc0aa8489269 315 Gene3D G3DSA:3.40.190.10 210 265 4.7E-7 T 19-04-2016 ALIDE2_RS03225 6929e97685b4c3b50341fc0aa8489269 315 PANTHER PTHR30126:SF2 4 307 1.2E-82 T 19-04-2016 ALIDE2_RS03225 6929e97685b4c3b50341fc0aa8489269 315 Pfam PF03466 LysR substrate binding domain 96 308 1.7E-18 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS00835 9e27843d3e77a810eeae59ac98504ff0 327 SUPERFAMILY SSF53850 116 287 9.78E-13 T 19-04-2016 ALIDE2_RS00835 9e27843d3e77a810eeae59ac98504ff0 327 PIRSF PIRSF017082 1 326 6.6E-76 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00835 9e27843d3e77a810eeae59ac98504ff0 327 PANTHER PTHR30349:SF16 1 312 1.2E-84 T 19-04-2016 ALIDE2_RS00835 9e27843d3e77a810eeae59ac98504ff0 327 PANTHER PTHR30349 1 312 1.2E-84 T 19-04-2016 ALIDE2_RS00835 9e27843d3e77a810eeae59ac98504ff0 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 323 4.1E-88 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS17730 5577afa66de33f29bd7653239f2e1fda 314 Gene3D G3DSA:3.40.50.720 10 120 6.0E-24 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS17730 5577afa66de33f29bd7653239f2e1fda 314 SUPERFAMILY SSF51735 103 284 3.35E-54 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS17730 5577afa66de33f29bd7653239f2e1fda 314 SUPERFAMILY SSF52283 9 137 5.29E-25 T 19-04-2016 ALIDE2_RS17730 5577afa66de33f29bd7653239f2e1fda 314 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 16 309 3.9E-14 T 19-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS17730 5577afa66de33f29bd7653239f2e1fda 314 PANTHER PTHR10996 1 314 7.1E-94 T 19-04-2016 ALIDE2_RS17730 5577afa66de33f29bd7653239f2e1fda 314 Gene3D G3DSA:3.40.50.720 121 285 3.8E-56 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS17730 5577afa66de33f29bd7653239f2e1fda 314 PANTHER PTHR10996:SF152 1 314 7.1E-94 T 19-04-2016 ALIDE2_RS17730 5577afa66de33f29bd7653239f2e1fda 314 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 283 8.4E-52 T 19-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 SUPERFAMILY SSF51246 331 444 8.37E-34 T 19-04-2016 IPR011054 Rudiment single hybrid motif ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 5.2E-31 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 SMART SM00878 336 440 5.2E-45 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.2E-39 T 19-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 SUPERFAMILY SSF51230 593 664 3.14E-17 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 320 1.5E-58 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 Pfam PF00364 Biotin-requiring enzyme 601 664 2.9E-14 T 19-04-2016 IPR000089 Biotin/lipoyl attachment ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 Gene3D G3DSA:3.30.470.20 204 443 1.1E-82 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 SUPERFAMILY SSF56059 83 327 7.25E-59 T 19-04-2016 ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 Gene3D G3DSA:3.30.1490.20 138 203 7.9E-19 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 PANTHER PTHR18866 1 566 2.0E-222 T 19-04-2016 ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 PANTHER PTHR18866 582 667 2.0E-222 T 19-04-2016 ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 Gene3D G3DSA:2.40.50.100 598 664 5.0E-19 T 19-04-2016 ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 Gene3D G3DSA:3.40.50.20 1 130 4.6E-45 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS08145 db52fa76f7194cabcf0ef6b1986c0a01 668 SUPERFAMILY SSF52440 1 112 4.17E-43 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS14205 1e144b6aa5668aa00c96e5e72a110053 240 PANTHER PTHR24220 25 240 2.1E-98 T 19-04-2016 ALIDE2_RS14205 1e144b6aa5668aa00c96e5e72a110053 240 PANTHER PTHR24220:SF509 25 240 2.1E-98 T 19-04-2016 ALIDE2_RS14205 1e144b6aa5668aa00c96e5e72a110053 240 SMART SM00382 52 238 1.2E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS14205 1e144b6aa5668aa00c96e5e72a110053 240 Pfam PF00005 ABC transporter 43 189 4.1E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS14205 1e144b6aa5668aa00c96e5e72a110053 240 SUPERFAMILY SSF52540 23 240 3.75E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14205 1e144b6aa5668aa00c96e5e72a110053 240 Gene3D G3DSA:3.40.50.300 22 240 1.2E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14205 1e144b6aa5668aa00c96e5e72a110053 240 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS02910 545f7e0cb5ba44662a7868a2f640ca9c 405 SUPERFAMILY SSF53901 4 253 1.12E-62 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS02910 545f7e0cb5ba44662a7868a2f640ca9c 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 19-04-2016 IPR018201 Beta-ketoacyl synthase, active site ALIDE2_RS02910 545f7e0cb5ba44662a7868a2f640ca9c 405 SMART SM00825 Beta-ketoacyl synthase 6 404 8.1E-12 T 19-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ALIDE2_RS02910 545f7e0cb5ba44662a7868a2f640ca9c 405 PANTHER PTHR11712 1 405 1.0E-151 T 19-04-2016 ALIDE2_RS02910 545f7e0cb5ba44662a7868a2f640ca9c 405 Gene3D G3DSA:3.40.47.10 263 404 1.8E-47 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS02910 545f7e0cb5ba44662a7868a2f640ca9c 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 1.1E-44 T 19-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal ALIDE2_RS02910 545f7e0cb5ba44662a7868a2f640ca9c 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 361 4.6E-25 T 19-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal ALIDE2_RS02910 545f7e0cb5ba44662a7868a2f640ca9c 405 SUPERFAMILY SSF53901 215 404 8.23E-59 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS02910 545f7e0cb5ba44662a7868a2f640ca9c 405 Gene3D G3DSA:3.40.47.10 3 257 1.4E-58 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS13205 4904b6c96841f72c67fd7a1d70814b5b 659 Gene3D G3DSA:2.40.170.20 161 659 6.9E-70 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS13205 4904b6c96841f72c67fd7a1d70814b5b 659 SUPERFAMILY SSF56935 41 659 1.14E-91 T 19-04-2016 ALIDE2_RS13205 4904b6c96841f72c67fd7a1d70814b5b 659 PANTHER PTHR32552 18 659 4.0E-42 T 19-04-2016 ALIDE2_RS13205 4904b6c96841f72c67fd7a1d70814b5b 659 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 154 1.8E-18 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS13205 4904b6c96841f72c67fd7a1d70814b5b 659 Gene3D G3DSA:2.170.130.10 30 160 1.2E-27 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS13205 4904b6c96841f72c67fd7a1d70814b5b 659 Pfam PF00593 TonB dependent receptor 436 658 1.8E-27 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS14590 b66eb4ade02ea4301dd785ec551083ad 200 PANTHER PTHR39206:SF1 1 198 4.2E-25 T 19-04-2016 ALIDE2_RS14590 b66eb4ade02ea4301dd785ec551083ad 200 Pfam PF06414 Zeta toxin 10 141 3.3E-8 T 19-04-2016 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 ALIDE2_RS14590 b66eb4ade02ea4301dd785ec551083ad 200 PANTHER PTHR39206 1 198 4.2E-25 T 19-04-2016 ALIDE2_RS14590 b66eb4ade02ea4301dd785ec551083ad 200 SUPERFAMILY SSF52540 9 143 6.84E-9 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14590 b66eb4ade02ea4301dd785ec551083ad 200 Gene3D G3DSA:3.40.50.300 10 144 3.6E-7 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12390 4e645790184f125c74e20a8c78843510 357 Hamap MF_01694 Biotin synthase [bioB]. 39 347 40.379 T 19-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 ALIDE2_RS12390 4e645790184f125c74e20a8c78843510 357 Gene3D G3DSA:3.20.20.70 40 345 2.4E-94 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS12390 4e645790184f125c74e20a8c78843510 357 SUPERFAMILY SSF102114 39 345 1.96E-84 T 19-04-2016 ALIDE2_RS12390 4e645790184f125c74e20a8c78843510 357 Pfam PF04055 Radical SAM superfamily 83 229 7.1E-15 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ALIDE2_RS12390 4e645790184f125c74e20a8c78843510 357 PANTHER PTHR22976 37 345 4.9E-142 T 19-04-2016 ALIDE2_RS12390 4e645790184f125c74e20a8c78843510 357 SMART SM00729 77 289 7.6E-33 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ALIDE2_RS12390 4e645790184f125c74e20a8c78843510 357 SMART SM00876 254 346 5.7E-42 T 19-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 ALIDE2_RS12390 4e645790184f125c74e20a8c78843510 357 TIGRFAM TIGR00433 bioB: biotin synthase 49 344 3.3E-115 T 19-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 ALIDE2_RS12390 4e645790184f125c74e20a8c78843510 357 PIRSF PIRSF001619 29 353 2.6E-120 T 19-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 ALIDE2_RS12390 4e645790184f125c74e20a8c78843510 357 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 254 344 5.7E-17 T 19-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 ALIDE2_RS12390 4e645790184f125c74e20a8c78843510 357 PANTHER PTHR22976:SF1 37 345 4.9E-142 T 19-04-2016 ALIDE2_RS00335 8308bb817f1eba1c489180624f07cd83 269 SUPERFAMILY SSF82861 18 101 3.79E-12 T 19-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 ALIDE2_RS00335 8308bb817f1eba1c489180624f07cd83 269 Pfam PF00924 Mechanosensitive ion channel 63 255 2.6E-35 T 19-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ALIDE2_RS00335 8308bb817f1eba1c489180624f07cd83 269 SUPERFAMILY SSF50182 105 170 9.15E-16 T 19-04-2016 IPR010920 LSM domain ALIDE2_RS00335 8308bb817f1eba1c489180624f07cd83 269 PANTHER PTHR30221 5 260 1.0E-119 T 19-04-2016 ALIDE2_RS00335 8308bb817f1eba1c489180624f07cd83 269 Gene3D G3DSA:2.30.30.60 120 169 1.3E-16 T 19-04-2016 ALIDE2_RS00335 8308bb817f1eba1c489180624f07cd83 269 Gene3D G3DSA:3.30.70.100 173 256 7.3E-9 T 19-04-2016 ALIDE2_RS00335 8308bb817f1eba1c489180624f07cd83 269 SUPERFAMILY SSF82689 173 260 8.11E-15 T 19-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ALIDE2_RS00335 8308bb817f1eba1c489180624f07cd83 269 PANTHER PTHR30221:SF3 5 260 1.0E-119 T 19-04-2016 ALIDE2_RS22105 da12bcfb4924834ac840107029bf35b5 426 Gene3D G3DSA:3.40.605.10 6 228 3.8E-96 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22105 da12bcfb4924834ac840107029bf35b5 426 Gene3D G3DSA:3.40.605.10 384 425 3.8E-96 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22105 da12bcfb4924834ac840107029bf35b5 426 PANTHER PTHR11063:SF8 8 425 2.5E-168 T 19-04-2016 ALIDE2_RS22105 da12bcfb4924834ac840107029bf35b5 426 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 332 353 - T 19-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 ALIDE2_RS22105 da12bcfb4924834ac840107029bf35b5 426 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 17 415 6.3E-143 T 19-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 ALIDE2_RS22105 da12bcfb4924834ac840107029bf35b5 426 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 9 425 39.596 T 19-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 ALIDE2_RS22105 da12bcfb4924834ac840107029bf35b5 426 PANTHER PTHR11063 8 425 2.5E-168 T 19-04-2016 ALIDE2_RS22105 da12bcfb4924834ac840107029bf35b5 426 Gene3D G3DSA:3.40.309.10 230 383 7.3E-41 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS22105 da12bcfb4924834ac840107029bf35b5 426 PIRSF PIRSF000151 2 426 4.1E-165 T 19-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 ALIDE2_RS22105 da12bcfb4924834ac840107029bf35b5 426 Pfam PF00171 Aldehyde dehydrogenase family 16 284 8.8E-13 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22105 da12bcfb4924834ac840107029bf35b5 426 Pfam PF00171 Aldehyde dehydrogenase family 318 382 2.9E-7 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS22105 da12bcfb4924834ac840107029bf35b5 426 SUPERFAMILY SSF53720 12 424 2.09E-113 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS16225 9b985589cbdd4bda8ea6c32fe9319481 532 PANTHER PTHR30563 10 519 4.1E-105 T 19-04-2016 ALIDE2_RS16225 9b985589cbdd4bda8ea6c32fe9319481 532 Pfam PF02646 RmuC family 190 487 2.4E-99 T 19-04-2016 IPR003798 DNA recombination RmuC ALIDE2_RS14285 14d7bf3e0e5bf4e81902eeb0ad220cfb 298 PIRSF PIRSF000103 1 298 5.8E-80 T 19-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 ALIDE2_RS14285 14d7bf3e0e5bf4e81902eeb0ad220cfb 298 SUPERFAMILY SSF48179 166 296 2.04E-39 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS14285 14d7bf3e0e5bf4e81902eeb0ad220cfb 298 PANTHER PTHR22981 1 297 3.2E-112 T 19-04-2016 ALIDE2_RS14285 14d7bf3e0e5bf4e81902eeb0ad220cfb 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 19-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 ALIDE2_RS14285 14d7bf3e0e5bf4e81902eeb0ad220cfb 298 SUPERFAMILY SSF51735 1 165 1.46E-44 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS14285 14d7bf3e0e5bf4e81902eeb0ad220cfb 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 294 3.4E-35 T 19-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ALIDE2_RS14285 14d7bf3e0e5bf4e81902eeb0ad220cfb 298 Gene3D G3DSA:1.10.1040.10 166 296 4.9E-45 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS14285 14d7bf3e0e5bf4e81902eeb0ad220cfb 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 164 5.6E-51 T 19-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 ALIDE2_RS14285 14d7bf3e0e5bf4e81902eeb0ad220cfb 298 Gene3D G3DSA:3.40.50.720 1 164 1.5E-56 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS14285 14d7bf3e0e5bf4e81902eeb0ad220cfb 298 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 5 294 2.9E-126 T 19-04-2016 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|UniPathway: UPA00362 ALIDE2_RS12545 6c0520d4e3314e44f4e1cbce8d38403e 335 Gene3D G3DSA:3.40.50.720 147 265 2.4E-36 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12545 6c0520d4e3314e44f4e1cbce8d38403e 335 Gene3D G3DSA:3.90.180.10 1 146 5.9E-39 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS12545 6c0520d4e3314e44f4e1cbce8d38403e 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 4.4E-8 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ALIDE2_RS12545 6c0520d4e3314e44f4e1cbce8d38403e 335 SUPERFAMILY SSF51735 113 269 7.4E-50 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12545 6c0520d4e3314e44f4e1cbce8d38403e 335 SMART SM00829 10 330 6.6E-38 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ALIDE2_RS12545 6c0520d4e3314e44f4e1cbce8d38403e 335 PANTHER PTHR11695:SF31 15 334 4.0E-113 T 19-04-2016 ALIDE2_RS12545 6c0520d4e3314e44f4e1cbce8d38403e 335 PANTHER PTHR11695 15 334 4.0E-113 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS12545 6c0520d4e3314e44f4e1cbce8d38403e 335 SUPERFAMILY SSF50129 1 138 8.07E-35 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS12545 6c0520d4e3314e44f4e1cbce8d38403e 335 Pfam PF00107 Zinc-binding dehydrogenase 153 267 4.3E-34 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ALIDE2_RS23455 afed07b8466f311782524eb7cafbb321 295 SMART SM00062 34 266 6.4E-57 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS23455 afed07b8466f311782524eb7cafbb321 295 SUPERFAMILY SSF53850 6 267 2.22E-64 T 19-04-2016 ALIDE2_RS23455 afed07b8466f311782524eb7cafbb321 295 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 263 6.7E-48 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS23455 afed07b8466f311782524eb7cafbb321 295 Gene3D G3DSA:3.40.190.10 120 226 2.9E-23 T 19-04-2016 ALIDE2_RS23455 afed07b8466f311782524eb7cafbb321 295 PANTHER PTHR30085:SF2 1 291 2.8E-108 T 19-04-2016 ALIDE2_RS23455 afed07b8466f311782524eb7cafbb321 295 PANTHER PTHR30085 1 291 2.8E-108 T 19-04-2016 ALIDE2_RS23455 afed07b8466f311782524eb7cafbb321 295 Gene3D G3DSA:3.40.190.10 227 268 6.5E-31 T 19-04-2016 ALIDE2_RS23455 afed07b8466f311782524eb7cafbb321 295 Gene3D G3DSA:3.40.190.10 31 119 6.5E-31 T 19-04-2016 ALIDE2_RS00585 f2a617895daf37e37b3e319ea945d3ef 676 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 131 671 2.9E-134 T 19-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 ALIDE2_RS00585 f2a617895daf37e37b3e319ea945d3ef 676 Pfam PF03477 ATP cone domain 15 101 5.9E-16 T 19-04-2016 IPR005144 ATP-cone domain ALIDE2_RS00585 f2a617895daf37e37b3e319ea945d3ef 676 SUPERFAMILY SSF51998 132 665 1.86E-154 T 19-04-2016 ALIDE2_RS00585 f2a617895daf37e37b3e319ea945d3ef 676 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 132 665 6.9E-170 T 19-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 ALIDE2_RS00585 f2a617895daf37e37b3e319ea945d3ef 676 PANTHER PTHR21075 5 664 4.2E-217 T 19-04-2016 ALIDE2_RS00585 f2a617895daf37e37b3e319ea945d3ef 676 Gene3D G3DSA:3.20.70.20 137 665 3.2E-194 T 19-04-2016 ALIDE2_RS15635 f6d8cc37aa0f32c282754e7eec27c720 108 Pfam PF00085 Thioredoxin 14 103 5.0E-15 T 19-04-2016 IPR013766 Thioredoxin domain GO:0045454 ALIDE2_RS15635 f6d8cc37aa0f32c282754e7eec27c720 108 Gene3D G3DSA:3.40.30.10 7 104 1.6E-18 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS15635 f6d8cc37aa0f32c282754e7eec27c720 108 SUPERFAMILY SSF52833 11 104 4.79E-21 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS15410 309e0be10e0bcca55f6dc712843b62d6 372 SUPERFAMILY SSF51905 13 227 9.06E-22 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15410 309e0be10e0bcca55f6dc712843b62d6 372 SUPERFAMILY SSF51905 311 352 9.06E-22 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15410 309e0be10e0bcca55f6dc712843b62d6 372 Gene3D G3DSA:3.50.50.60 153 172 9.9E-15 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15410 309e0be10e0bcca55f6dc712843b62d6 372 Gene3D G3DSA:3.50.50.60 13 93 9.9E-15 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15410 309e0be10e0bcca55f6dc712843b62d6 372 Gene3D G3DSA:3.30.9.10 173 309 5.8E-21 T 19-04-2016 ALIDE2_RS15410 309e0be10e0bcca55f6dc712843b62d6 372 Pfam PF01266 FAD dependent oxidoreductase 13 341 2.7E-34 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS15410 309e0be10e0bcca55f6dc712843b62d6 372 SUPERFAMILY SSF54373 220 309 2.75E-16 T 19-04-2016 ALIDE2_RS15410 309e0be10e0bcca55f6dc712843b62d6 372 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 13 351 2.5E-77 T 19-04-2016 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 UniPathway: UPA00060 ALIDE2_RS19850 61eb6f903f4109dcf3cd59783271ee4d 88 PANTHER PTHR23321 6 87 4.0E-42 T 19-04-2016 ALIDE2_RS19850 61eb6f903f4109dcf3cd59783271ee4d 88 SUPERFAMILY SSF47060 2 88 1.18E-34 T 19-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 ALIDE2_RS19850 61eb6f903f4109dcf3cd59783271ee4d 88 SMART SM01387 7 87 1.4E-52 T 19-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS19850 61eb6f903f4109dcf3cd59783271ee4d 88 Gene3D G3DSA:1.10.287.10 3 88 2.1E-38 T 19-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 ALIDE2_RS19850 61eb6f903f4109dcf3cd59783271ee4d 88 ProSitePatterns PS00362 Ribosomal protein S15 signature. 38 68 - T 19-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS19850 61eb6f903f4109dcf3cd59783271ee4d 88 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 2 88 21.555 T 19-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS19850 61eb6f903f4109dcf3cd59783271ee4d 88 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 9 87 2.0E-27 T 19-04-2016 ALIDE2_RS19850 61eb6f903f4109dcf3cd59783271ee4d 88 Pfam PF00312 Ribosomal protein S15 7 87 9.0E-38 T 19-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS19850 61eb6f903f4109dcf3cd59783271ee4d 88 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 88 5.4E-38 T 19-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS14670 06aa9e236789b0c8783eac33d552af73 397 SUPERFAMILY SSF53901 210 384 1.06E-42 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS14670 06aa9e236789b0c8783eac33d552af73 397 SUPERFAMILY SSF53901 6 123 1.06E-42 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS14670 06aa9e236789b0c8783eac33d552af73 397 PANTHER PTHR18919 1 390 2.4E-64 T 19-04-2016 ALIDE2_RS14670 06aa9e236789b0c8783eac33d552af73 397 PANTHER PTHR18919:SF69 1 390 2.4E-64 T 19-04-2016 ALIDE2_RS14670 06aa9e236789b0c8783eac33d552af73 397 Gene3D G3DSA:3.40.47.10 149 188 2.6E-32 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS14670 06aa9e236789b0c8783eac33d552af73 397 Gene3D G3DSA:3.40.47.10 267 387 2.6E-32 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS14670 06aa9e236789b0c8783eac33d552af73 397 PIRSF PIRSF000429 1 390 1.7E-74 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS14670 06aa9e236789b0c8783eac33d552af73 397 ProSitePatterns PS00737 Thiolases signature 2. 329 345 - T 19-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 ALIDE2_RS14670 06aa9e236789b0c8783eac33d552af73 397 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 385 7.0E-75 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS14670 06aa9e236789b0c8783eac33d552af73 397 Gene3D G3DSA:3.40.47.10 189 265 1.3E-38 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS14670 06aa9e236789b0c8783eac33d552af73 397 Gene3D G3DSA:3.40.47.10 6 123 1.3E-38 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS14670 06aa9e236789b0c8783eac33d552af73 397 Pfam PF02803 Thiolase, C-terminal domain 261 383 4.6E-19 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS14670 06aa9e236789b0c8783eac33d552af73 397 Pfam PF00108 Thiolase, N-terminal domain 8 251 1.9E-33 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS20140 11c1258ac85658c7f02584dbe875b911 463 PANTHER PTHR23135:SF3 23 458 7.4E-134 T 19-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS20140 11c1258ac85658c7f02584dbe875b911 463 Pfam PF02875 Mur ligase family, glutamate ligase domain 337 404 7.4E-11 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS20140 11c1258ac85658c7f02584dbe875b911 463 SUPERFAMILY SSF53244 339 456 5.95E-31 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS20140 11c1258ac85658c7f02584dbe875b911 463 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 10 457 30.959 T 19-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS20140 11c1258ac85658c7f02584dbe875b911 463 Pfam PF01225 Mur ligase family, catalytic domain 39 108 2.6E-9 T 19-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20140 11c1258ac85658c7f02584dbe875b911 463 PANTHER PTHR23135 23 458 7.4E-134 T 19-04-2016 ALIDE2_RS20140 11c1258ac85658c7f02584dbe875b911 463 Pfam PF08245 Mur ligase middle domain 118 306 2.0E-38 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20140 11c1258ac85658c7f02584dbe875b911 463 SUPERFAMILY SSF53623 113 325 1.44E-50 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20140 11c1258ac85658c7f02584dbe875b911 463 Gene3D G3DSA:3.40.1190.10 103 324 3.1E-67 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20140 11c1258ac85658c7f02584dbe875b911 463 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 41 455 3.5E-120 T 19-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS20140 11c1258ac85658c7f02584dbe875b911 463 Gene3D G3DSA:3.90.190.20 327 458 9.7E-39 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS20140 11c1258ac85658c7f02584dbe875b911 463 Gene3D G3DSA:3.40.1390.10 26 102 1.1E-17 T 19-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20140 11c1258ac85658c7f02584dbe875b911 463 SUPERFAMILY SSF63418 10 109 2.22E-17 T 19-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS14445 4621cd10096a41cb983bb82bda57c5aa 447 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 39 216 1.3E-56 T 19-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 ALIDE2_RS14445 4621cd10096a41cb983bb82bda57c5aa 447 SUPERFAMILY SSF53756 317 437 1.51E-6 T 19-04-2016 ALIDE2_RS14445 4621cd10096a41cb983bb82bda57c5aa 447 PANTHER PTHR23417 138 148 6.5E-61 T 19-04-2016 ALIDE2_RS14445 4621cd10096a41cb983bb82bda57c5aa 447 PANTHER PTHR23417 3 119 6.5E-61 T 19-04-2016 ALIDE2_RS14445 4621cd10096a41cb983bb82bda57c5aa 447 PANTHER PTHR23417 198 427 6.5E-61 T 19-04-2016 ALIDE2_RS14445 4621cd10096a41cb983bb82bda57c5aa 447 PANTHER PTHR23417:SF2 138 148 6.5E-61 T 19-04-2016 ALIDE2_RS14445 4621cd10096a41cb983bb82bda57c5aa 447 PANTHER PTHR23417:SF2 3 119 6.5E-61 T 19-04-2016 ALIDE2_RS14445 4621cd10096a41cb983bb82bda57c5aa 447 PANTHER PTHR23417:SF2 198 427 6.5E-61 T 19-04-2016 ALIDE2_RS20550 096877a077fb9167071a1abc8e46876b 573 Gene3D G3DSA:3.40.50.980 25 230 4.6E-38 T 19-04-2016 ALIDE2_RS20550 096877a077fb9167071a1abc8e46876b 573 ProSitePatterns PS00455 Putative AMP-binding domain signature. 216 227 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS20550 096877a077fb9167071a1abc8e46876b 573 Gene3D G3DSA:3.30.300.30 464 563 1.4E-34 T 19-04-2016 ALIDE2_RS20550 096877a077fb9167071a1abc8e46876b 573 Gene3D G3DSA:2.30.38.10 384 458 3.6E-30 T 19-04-2016 ALIDE2_RS20550 096877a077fb9167071a1abc8e46876b 573 SUPERFAMILY SSF56801 21 563 7.06E-164 T 19-04-2016 ALIDE2_RS20550 096877a077fb9167071a1abc8e46876b 573 PANTHER PTHR24095 18 568 2.6E-206 T 19-04-2016 ALIDE2_RS20550 096877a077fb9167071a1abc8e46876b 573 Gene3D G3DSA:3.40.50.980 231 375 1.3E-53 T 19-04-2016 ALIDE2_RS20550 096877a077fb9167071a1abc8e46876b 573 Pfam PF00501 AMP-binding enzyme 35 467 6.0E-109 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS20550 096877a077fb9167071a1abc8e46876b 573 Pfam PF13193 AMP-binding enzyme C-terminal domain 476 551 4.0E-19 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS03645 4a2450c89ba9daa533b82c1ccdd071f1 239 SUPERFAMILY SSF52343 89 234 3.4E-31 T 19-04-2016 ALIDE2_RS03645 4a2450c89ba9daa533b82c1ccdd071f1 239 Pfam PF00175 Oxidoreductase NAD-binding domain 110 217 1.4E-20 T 19-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ALIDE2_RS03645 4a2450c89ba9daa533b82c1ccdd071f1 239 Gene3D G3DSA:2.40.30.10 4 90 1.5E-13 T 19-04-2016 ALIDE2_RS03645 4a2450c89ba9daa533b82c1ccdd071f1 239 SUPERFAMILY SSF63380 4 98 1.33E-13 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ALIDE2_RS03645 4a2450c89ba9daa533b82c1ccdd071f1 239 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 4.3E-11 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS03645 4a2450c89ba9daa533b82c1ccdd071f1 239 PRINTS PR00410 Phenol hydroxylase reductase family signature 109 128 4.3E-11 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS03645 4a2450c89ba9daa533b82c1ccdd071f1 239 PRINTS PR00410 Phenol hydroxylase reductase family signature 93 102 4.3E-11 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS03645 4a2450c89ba9daa533b82c1ccdd071f1 239 PRINTS PR00410 Phenol hydroxylase reductase family signature 203 211 4.3E-11 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS03645 4a2450c89ba9daa533b82c1ccdd071f1 239 PANTHER PTHR19370 4 239 3.9E-39 T 19-04-2016 ALIDE2_RS03645 4a2450c89ba9daa533b82c1ccdd071f1 239 Gene3D G3DSA:3.40.50.80 91 232 2.9E-36 T 19-04-2016 ALIDE2_RS18955 0ad7fbd06df2f0fb443e85e3a00ffc07 486 SUPERFAMILY SSF111283 27 485 6.41E-133 T 19-04-2016 ALIDE2_RS18955 0ad7fbd06df2f0fb443e85e3a00ffc07 486 PIRSF PIRSF004919 24 486 5.3E-133 T 19-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS18955 0ad7fbd06df2f0fb443e85e3a00ffc07 486 PANTHER PTHR30624:SF4 23 486 1.7E-221 T 19-04-2016 ALIDE2_RS18955 0ad7fbd06df2f0fb443e85e3a00ffc07 486 PANTHER PTHR30624 23 486 1.7E-221 T 19-04-2016 ALIDE2_RS18955 0ad7fbd06df2f0fb443e85e3a00ffc07 486 Pfam PF01523 Putative modulator of DNA gyrase 44 337 6.0E-66 T 19-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS13855 a6f6e6ab09197814e4af702e2690e299 188 Gene3D G3DSA:2.10.109.10 95 180 2.6E-9 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS13855 a6f6e6ab09197814e4af702e2690e299 188 SUPERFAMILY SSF51306 95 181 1.1E-10 T 19-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C ALIDE2_RS13855 a6f6e6ab09197814e4af702e2690e299 188 Pfam PF00717 Peptidase S24-like 96 158 4.7E-8 T 19-04-2016 IPR019759 Peptidase S24/S26A/S26B ALIDE2_RS21310 f49d090c5202373ce42b29e248d213ca 329 PIRSF PIRSF017082 1 329 5.0E-70 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS21310 f49d090c5202373ce42b29e248d213ca 329 PANTHER PTHR30349:SF32 1 329 2.8E-76 T 19-04-2016 ALIDE2_RS21310 f49d090c5202373ce42b29e248d213ca 329 PANTHER PTHR30349 1 329 2.8E-76 T 19-04-2016 ALIDE2_RS21310 f49d090c5202373ce42b29e248d213ca 329 SUPERFAMILY SSF53850 113 292 1.47E-8 T 19-04-2016 ALIDE2_RS21310 f49d090c5202373ce42b29e248d213ca 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 325 2.9E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS03360 7bae261f9adfd5f3d4a032f193f81b8e 636 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 636 38.72 T 19-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 ALIDE2_RS03360 7bae261f9adfd5f3d4a032f193f81b8e 636 PANTHER PTHR10937:SF0 1 636 2.0E-291 T 19-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 ALIDE2_RS03360 7bae261f9adfd5f3d4a032f193f81b8e 636 SUPERFAMILY SSF53697 265 636 4.64E-107 T 19-04-2016 ALIDE2_RS03360 7bae261f9adfd5f3d4a032f193f81b8e 636 Gene3D G3DSA:3.60.20.10 2 243 1.5E-72 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS03360 7bae261f9adfd5f3d4a032f193f81b8e 636 Pfam PF01380 SIS domain 490 617 1.4E-23 T 19-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 ALIDE2_RS03360 7bae261f9adfd5f3d4a032f193f81b8e 636 Pfam PF01380 SIS domain 320 439 1.7E-22 T 19-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 ALIDE2_RS03360 7bae261f9adfd5f3d4a032f193f81b8e 636 Pfam PF13522 Glutamine amidotransferase domain 72 208 2.6E-20 T 19-04-2016 ALIDE2_RS03360 7bae261f9adfd5f3d4a032f193f81b8e 636 Gene3D G3DSA:3.40.50.10490 470 636 3.2E-64 T 19-04-2016 ALIDE2_RS03360 7bae261f9adfd5f3d4a032f193f81b8e 636 PANTHER PTHR10937 1 636 2.0E-291 T 19-04-2016 ALIDE2_RS03360 7bae261f9adfd5f3d4a032f193f81b8e 636 Gene3D G3DSA:3.40.50.10490 264 469 4.3E-61 T 19-04-2016 ALIDE2_RS03360 7bae261f9adfd5f3d4a032f193f81b8e 636 SUPERFAMILY SSF56235 2 246 4.55E-67 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS03360 7bae261f9adfd5f3d4a032f193f81b8e 636 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 636 4.7E-235 T 19-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 ALIDE2_RS03320 08064fb950ff60af155cfcef7414d9fc 460 PANTHER PTHR21666:SF221 196 419 1.4E-59 T 19-04-2016 ALIDE2_RS03320 08064fb950ff60af155cfcef7414d9fc 460 Gene3D G3DSA:2.70.70.10 282 420 5.9E-48 T 19-04-2016 ALIDE2_RS03320 08064fb950ff60af155cfcef7414d9fc 460 Pfam PF01551 Peptidase family M23 322 416 4.4E-33 T 19-04-2016 IPR016047 Peptidase M23 ALIDE2_RS03320 08064fb950ff60af155cfcef7414d9fc 460 PANTHER PTHR21666 196 419 1.4E-59 T 19-04-2016 ALIDE2_RS03320 08064fb950ff60af155cfcef7414d9fc 460 SUPERFAMILY SSF51261 170 418 1.1E-69 T 19-04-2016 IPR011055 Duplicated hybrid motif ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 Pfam PF03477 ATP cone domain 35 131 1.6E-16 T 19-04-2016 IPR005144 ATP-cone domain ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 289 364 5.2E-21 T 19-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 748 770 - T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 Pfam PF02867 Ribonucleotide reductase, barrel domain 370 904 3.5E-181 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 Gene3D G3DSA:3.20.70.20 280 491 4.3E-84 T 19-04-2016 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 Gene3D G3DSA:3.20.70.20 865 909 4.3E-84 T 19-04-2016 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 Gene3D G3DSA:3.20.70.20 546 703 4.3E-84 T 19-04-2016 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 Gene3D G3DSA:3.20.70.20 759 804 4.3E-84 T 19-04-2016 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 PRINTS PR01183 Ribonucleotide reductase large chain signature 683 706 6.35E-45 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 PRINTS PR01183 Ribonucleotide reductase large chain signature 617 640 6.35E-45 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 PRINTS PR01183 Ribonucleotide reductase large chain signature 580 591 6.35E-45 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 PRINTS PR01183 Ribonucleotide reductase large chain signature 759 786 6.35E-45 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 PRINTS PR01183 Ribonucleotide reductase large chain signature 655 677 6.35E-45 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 PRINTS PR01183 Ribonucleotide reductase large chain signature 445 464 6.35E-45 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 PANTHER PTHR11573 149 931 0.0 T 19-04-2016 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 SUPERFAMILY SSF48168 153 368 1.44E-58 T 19-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 292 908 6.1E-213 T 19-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 SUPERFAMILY SSF51998 369 808 2.47E-181 T 19-04-2016 ALIDE2_RS19020 1bee58925caa3da7007871c53286598c 970 SUPERFAMILY SSF51998 839 909 2.47E-181 T 19-04-2016 ALIDE2_RS03680 2918b0ade58c53e21391c4ede7c3d6d8 770 SMART SM00382 532 718 9.3E-20 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS03680 2918b0ade58c53e21391c4ede7c3d6d8 770 Gene3D G3DSA:1.20.1560.10 173 487 5.5E-85 T 19-04-2016 ALIDE2_RS03680 2918b0ade58c53e21391c4ede7c3d6d8 770 ProSitePatterns PS00211 ABC transporters family signature. 644 658 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS03680 2918b0ade58c53e21391c4ede7c3d6d8 770 SUPERFAMILY SSF90123 173 487 3.53E-78 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ALIDE2_RS03680 2918b0ade58c53e21391c4ede7c3d6d8 770 SUPERFAMILY SSF52540 498 742 3.7E-93 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03680 2918b0ade58c53e21391c4ede7c3d6d8 770 PANTHER PTHR24221 164 751 4.1E-236 T 19-04-2016 ALIDE2_RS03680 2918b0ade58c53e21391c4ede7c3d6d8 770 Pfam PF00664 ABC transporter transmembrane region 187 458 3.6E-43 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ALIDE2_RS03680 2918b0ade58c53e21391c4ede7c3d6d8 770 Gene3D G3DSA:3.40.50.300 506 735 6.3E-87 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03680 2918b0ade58c53e21391c4ede7c3d6d8 770 Pfam PF00005 ABC transporter 524 672 1.2E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS20395 f0bdb2e4983a22a53b70644c4320436e 398 Gene3D G3DSA:1.10.540.10 1 121 2.0E-30 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS20395 f0bdb2e4983a22a53b70644c4320436e 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 121 7.7E-26 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS20395 f0bdb2e4983a22a53b70644c4320436e 398 SUPERFAMILY SSF47203 231 398 1.93E-22 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS20395 f0bdb2e4983a22a53b70644c4320436e 398 PANTHER PTHR10909:SF229 366 398 1.3E-159 T 19-04-2016 ALIDE2_RS20395 f0bdb2e4983a22a53b70644c4320436e 398 PANTHER PTHR10909:SF229 1 347 1.3E-159 T 19-04-2016 ALIDE2_RS20395 f0bdb2e4983a22a53b70644c4320436e 398 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 395 4.4E-23 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS20395 f0bdb2e4983a22a53b70644c4320436e 398 Gene3D G3DSA:1.20.140.10 222 397 1.7E-28 T 19-04-2016 ALIDE2_RS20395 f0bdb2e4983a22a53b70644c4320436e 398 SUPERFAMILY SSF56645 1 243 1.1E-78 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS20395 f0bdb2e4983a22a53b70644c4320436e 398 Gene3D G3DSA:2.40.110.10 124 221 1.3E-36 T 19-04-2016 ALIDE2_RS20395 f0bdb2e4983a22a53b70644c4320436e 398 PANTHER PTHR10909 366 398 1.3E-159 T 19-04-2016 ALIDE2_RS20395 f0bdb2e4983a22a53b70644c4320436e 398 PANTHER PTHR10909 1 347 1.3E-159 T 19-04-2016 ALIDE2_RS20395 f0bdb2e4983a22a53b70644c4320436e 398 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 207 1.1E-21 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS18855 e63aa3a68f072824a206a73f50f71922 268 SUPERFAMILY SSF47240 54 238 8.12E-16 T 19-04-2016 IPR009078 Ferritin-like superfamily ALIDE2_RS18855 e63aa3a68f072824a206a73f50f71922 268 PANTHER PTHR21496 1 266 2.3E-74 T 19-04-2016 ALIDE2_RS18855 e63aa3a68f072824a206a73f50f71922 268 PIRSF PIRSF012318 1 267 1.4E-92 T 19-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 ALIDE2_RS18855 e63aa3a68f072824a206a73f50f71922 268 PANTHER PTHR21496:SF10 1 266 2.3E-74 T 19-04-2016 ALIDE2_RS18855 e63aa3a68f072824a206a73f50f71922 268 Pfam PF04305 Protein of unknown function (DUF455) 14 262 8.5E-90 T 19-04-2016 IPR007402 Protein of unknown function DUF455 ALIDE2_RS06380 a186de2a6179f814973c514d7a77bd58 360 Gene3D G3DSA:3.20.20.300 6 331 1.8E-91 T 19-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ALIDE2_RS06380 a186de2a6179f814973c514d7a77bd58 360 SUPERFAMILY SSF51445 6 334 8.84E-77 T 19-04-2016 IPR017853 Glycoside hydrolase superfamily ALIDE2_RS06380 a186de2a6179f814973c514d7a77bd58 360 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 6 360 49.608 T 19-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 ALIDE2_RS06380 a186de2a6179f814973c514d7a77bd58 360 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 9 310 1.4E-67 T 19-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ALIDE2_RS06380 a186de2a6179f814973c514d7a77bd58 360 PANTHER PTHR30480:SF7 7 316 5.8E-98 T 19-04-2016 ALIDE2_RS06380 a186de2a6179f814973c514d7a77bd58 360 PANTHER PTHR30480 7 316 5.8E-98 T 19-04-2016 ALIDE2_RS06940 c66564538b799bc190377e36b2dbb821 224 SUPERFAMILY SSF46689 13 97 5.64E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS06940 c66564538b799bc190377e36b2dbb821 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 1.9E-6 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS06940 c66564538b799bc190377e36b2dbb821 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 1.9E-6 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS06940 c66564538b799bc190377e36b2dbb821 224 PANTHER PTHR30055 9 119 1.2E-20 T 19-04-2016 ALIDE2_RS06940 c66564538b799bc190377e36b2dbb821 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 1.7E-11 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS06940 c66564538b799bc190377e36b2dbb821 224 Gene3D G3DSA:1.10.357.10 3 192 4.3E-30 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS06060 1b840688341a9589a3194cadeb1b6b94 74 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 9 72 8.3E-29 T 19-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor ALIDE2_RS06060 1b840688341a9589a3194cadeb1b6b94 74 PANTHER PTHR40613 7 73 6.9E-18 T 19-04-2016 ALIDE2_RS06060 1b840688341a9589a3194cadeb1b6b94 74 PANTHER PTHR40613:SF1 7 73 6.9E-18 T 19-04-2016 ALIDE2_RS06060 1b840688341a9589a3194cadeb1b6b94 74 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 19 72 5.0E-20 T 19-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor ALIDE2_RS03340 8341deae76f1b9463faf6999e228377b 260 PANTHER PTHR24423 12 249 1.1E-49 T 19-04-2016 ALIDE2_RS03340 8341deae76f1b9463faf6999e228377b 260 SMART SM00387 147 260 5.5E-19 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS03340 8341deae76f1b9463faf6999e228377b 260 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 149 257 2.0E-15 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS03340 8341deae76f1b9463faf6999e228377b 260 PRINTS PR00344 Bacterial sensor protein C-terminal signature 244 257 1.1E-6 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS03340 8341deae76f1b9463faf6999e228377b 260 PRINTS PR00344 Bacterial sensor protein C-terminal signature 220 238 1.1E-6 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS03340 8341deae76f1b9463faf6999e228377b 260 PRINTS PR00344 Bacterial sensor protein C-terminal signature 187 201 1.1E-6 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS03340 8341deae76f1b9463faf6999e228377b 260 Gene3D G3DSA:3.30.565.10 106 257 8.4E-29 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS03340 8341deae76f1b9463faf6999e228377b 260 SUPERFAMILY SSF55874 106 258 3.01E-29 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS03340 8341deae76f1b9463faf6999e228377b 260 SUPERFAMILY SSF47384 17 104 1.57E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS03340 8341deae76f1b9463faf6999e228377b 260 PANTHER PTHR24423:SF383 12 249 1.1E-49 T 19-04-2016 ALIDE2_RS03340 8341deae76f1b9463faf6999e228377b 260 Gene3D G3DSA:1.10.287.130 27 103 2.7E-7 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS02950 54f3d83d371de9f2d3979138b9b1a4be 411 PANTHER PTHR11516:SF31 1 409 1.4E-268 T 19-04-2016 ALIDE2_RS02950 54f3d83d371de9f2d3979138b9b1a4be 411 Pfam PF00676 Dehydrogenase E1 component 82 376 3.6E-99 T 19-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 ALIDE2_RS02950 54f3d83d371de9f2d3979138b9b1a4be 411 Gene3D G3DSA:3.40.50.970 8 408 1.5E-128 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS02950 54f3d83d371de9f2d3979138b9b1a4be 411 SUPERFAMILY SSF52518 48 408 9.19E-95 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS02950 54f3d83d371de9f2d3979138b9b1a4be 411 Pfam PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal 6 45 7.4E-21 T 19-04-2016 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain KEGG: 00280+1.2.4.4|KEGG: 00640+1.2.4.4|MetaCyc: PWY-5046 ALIDE2_RS02950 54f3d83d371de9f2d3979138b9b1a4be 411 PANTHER PTHR11516 1 409 1.4E-268 T 19-04-2016 ALIDE2_RS07610 c590f7c1991134d7848e84f51b69d7d5 249 PANTHER PTHR21294:SF8 1 249 6.6E-159 T 19-04-2016 ALIDE2_RS07610 c590f7c1991134d7848e84f51b69d7d5 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 19-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 ALIDE2_RS07610 c590f7c1991134d7848e84f51b69d7d5 249 Gene3D G3DSA:3.40.50.620 1 247 7.6E-106 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS07610 c590f7c1991134d7848e84f51b69d7d5 249 PANTHER PTHR21294 1 249 6.6E-159 T 19-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 ALIDE2_RS07610 c590f7c1991134d7848e84f51b69d7d5 249 SMART SM00893 23 211 7.3E-69 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS07610 c590f7c1991134d7848e84f51b69d7d5 249 SUPERFAMILY SSF52402 1 242 6.77E-87 T 19-04-2016 ALIDE2_RS07610 c590f7c1991134d7848e84f51b69d7d5 249 Pfam PF01012 Electron transfer flavoprotein domain 28 206 4.6E-47 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS07610 c590f7c1991134d7848e84f51b69d7d5 249 PIRSF PIRSF000090 1 249 2.9E-86 T 19-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 ALIDE2_RS07280 39c0dc348e4e04da10384478133fedec 544 Gene3D G3DSA:1.10.287.950 289 491 3.5E-58 T 19-04-2016 ALIDE2_RS07280 39c0dc348e4e04da10384478133fedec 544 PANTHER PTHR32089:SF63 164 522 2.6E-137 T 19-04-2016 ALIDE2_RS07280 39c0dc348e4e04da10384478133fedec 544 PANTHER PTHR32089 164 522 2.6E-137 T 19-04-2016 ALIDE2_RS07280 39c0dc348e4e04da10384478133fedec 544 SUPERFAMILY SSF58104 239 520 8.89E-72 T 19-04-2016 ALIDE2_RS07280 39c0dc348e4e04da10384478133fedec 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 518 2.7E-60 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS07280 39c0dc348e4e04da10384478133fedec 544 Pfam PF02203 Tar ligand binding domain homologue 1 150 2.0E-9 T 19-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS07280 39c0dc348e4e04da10384478133fedec 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 370 397 6.2E-55 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS07280 39c0dc348e4e04da10384478133fedec 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 447 476 6.2E-55 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS07280 39c0dc348e4e04da10384478133fedec 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 6.2E-55 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS07280 39c0dc348e4e04da10384478133fedec 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 399 428 6.2E-55 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS07280 39c0dc348e4e04da10384478133fedec 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 293 322 6.2E-55 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS07280 39c0dc348e4e04da10384478133fedec 544 SMART SM00304 219 271 8.7E-7 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS07280 39c0dc348e4e04da10384478133fedec 544 Pfam PF00672 HAMP domain 201 266 7.4E-8 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS07280 39c0dc348e4e04da10384478133fedec 544 SMART SM00283 272 519 1.4E-87 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS01350 3147a41cf4f1c06fe0289b27498f337d 515 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 24 252 8.7E-69 T 19-04-2016 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 ALIDE2_RS01350 3147a41cf4f1c06fe0289b27498f337d 515 Pfam PF04945 YHS domain 410 452 5.7E-16 T 19-04-2016 IPR007029 YHS domain ALIDE2_RS01350 3147a41cf4f1c06fe0289b27498f337d 515 Gene3D G3DSA:1.10.620.20 7 510 3.6E-202 T 19-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 ALIDE2_RS01350 3147a41cf4f1c06fe0289b27498f337d 515 SUPERFAMILY SSF47240 7 513 1.41E-161 T 19-04-2016 IPR009078 Ferritin-like superfamily ALIDE2_RS15775 12b890518314db70e84e1b1bb937b76f 593 Pfam PF00664 ABC transporter transmembrane region 41 313 6.8E-36 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ALIDE2_RS15775 12b890518314db70e84e1b1bb937b76f 593 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 27 589 4.2E-199 T 19-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 ALIDE2_RS15775 12b890518314db70e84e1b1bb937b76f 593 Gene3D G3DSA:1.20.1560.10 27 341 2.2E-52 T 19-04-2016 ALIDE2_RS15775 12b890518314db70e84e1b1bb937b76f 593 SUPERFAMILY SSF52540 349 589 8.46E-85 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15775 12b890518314db70e84e1b1bb937b76f 593 ProSitePatterns PS00211 ABC transporters family signature. 494 508 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS15775 12b890518314db70e84e1b1bb937b76f 593 PANTHER PTHR24221 26 588 1.0E-175 T 19-04-2016 ALIDE2_RS15775 12b890518314db70e84e1b1bb937b76f 593 Gene3D G3DSA:3.40.50.300 356 584 7.6E-80 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15775 12b890518314db70e84e1b1bb937b76f 593 SMART SM00382 383 568 2.2E-21 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS15775 12b890518314db70e84e1b1bb937b76f 593 Pfam PF00005 ABC transporter 374 522 1.6E-33 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS15775 12b890518314db70e84e1b1bb937b76f 593 SUPERFAMILY SSF90123 27 343 2.49E-54 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ALIDE2_RS01780 6b7e7ce981eaecc2efea337771b87c11 91 PIRSF PIRSF002144 1 91 1.7E-32 T 19-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01780 6b7e7ce981eaecc2efea337771b87c11 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 19-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 ALIDE2_RS01780 6b7e7ce981eaecc2efea337771b87c11 91 SUPERFAMILY SSF54570 3 84 3.92E-35 T 19-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01780 6b7e7ce981eaecc2efea337771b87c11 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.2E-24 T 19-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01780 6b7e7ce981eaecc2efea337771b87c11 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.2E-24 T 19-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01780 6b7e7ce981eaecc2efea337771b87c11 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.2E-24 T 19-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01780 6b7e7ce981eaecc2efea337771b87c11 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.418 T 19-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01780 6b7e7ce981eaecc2efea337771b87c11 91 PANTHER PTHR11880 1 91 7.5E-54 T 19-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01780 6b7e7ce981eaecc2efea337771b87c11 91 Gene3D G3DSA:3.30.860.10 1 90 8.4E-41 T 19-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01780 6b7e7ce981eaecc2efea337771b87c11 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.1E-45 T 19-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS01780 6b7e7ce981eaecc2efea337771b87c11 91 Pfam PF00203 Ribosomal protein S19 3 83 9.1E-38 T 19-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS04645 26a61e58e11c47665cfaaa044d40ea81 209 PANTHER PTHR26402 7 203 1.7E-51 T 19-04-2016 ALIDE2_RS04645 26a61e58e11c47665cfaaa044d40ea81 209 SUPERFAMILY SSF52172 6 155 1.1E-30 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS04645 26a61e58e11c47665cfaaa044d40ea81 209 SMART SM00421 142 199 7.3E-17 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS04645 26a61e58e11c47665cfaaa044d40ea81 209 Pfam PF00072 Response regulator receiver domain 9 118 4.5E-21 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS04645 26a61e58e11c47665cfaaa044d40ea81 209 SMART SM00448 7 118 2.1E-26 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS04645 26a61e58e11c47665cfaaa044d40ea81 209 SUPERFAMILY SSF46894 137 200 1.4E-16 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS04645 26a61e58e11c47665cfaaa044d40ea81 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 198 3.3E-15 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS04645 26a61e58e11c47665cfaaa044d40ea81 209 Gene3D G3DSA:3.40.50.2300 7 143 4.8E-30 T 19-04-2016 ALIDE2_RS04645 26a61e58e11c47665cfaaa044d40ea81 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS04645 26a61e58e11c47665cfaaa044d40ea81 209 PANTHER PTHR26402:SF613 7 203 1.7E-51 T 19-04-2016 ALIDE2_RS04645 26a61e58e11c47665cfaaa044d40ea81 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 1.3E-11 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS04645 26a61e58e11c47665cfaaa044d40ea81 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 1.3E-11 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS04645 26a61e58e11c47665cfaaa044d40ea81 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 1.3E-11 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS04645 26a61e58e11c47665cfaaa044d40ea81 209 Gene3D G3DSA:1.10.10.10 144 201 2.0E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02555 23789594d2a764541384c40a3b42d4e6 482 SUPERFAMILY SSF56112 10 285 9.44E-54 T 19-04-2016 IPR011009 Protein kinase-like domain ALIDE2_RS02555 23789594d2a764541384c40a3b42d4e6 482 Gene3D G3DSA:3.40.50.620 351 474 1.0E-11 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS02555 23789594d2a764541384c40a3b42d4e6 482 Gene3D G3DSA:3.30.200.20 7 135 2.7E-11 T 19-04-2016 ALIDE2_RS02555 23789594d2a764541384c40a3b42d4e6 482 Pfam PF00069 Protein kinase domain 44 274 3.3E-31 T 19-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ALIDE2_RS02555 23789594d2a764541384c40a3b42d4e6 482 Gene3D G3DSA:1.10.510.10 136 278 1.6E-34 T 19-04-2016 ALIDE2_RS02555 23789594d2a764541384c40a3b42d4e6 482 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 144 156 - T 19-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 ALIDE2_RS02555 23789594d2a764541384c40a3b42d4e6 482 PANTHER PTHR24362:SF160 1 288 8.4E-54 T 19-04-2016 ALIDE2_RS02555 23789594d2a764541384c40a3b42d4e6 482 SMART SM00220 13 284 5.4E-26 T 19-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ALIDE2_RS02555 23789594d2a764541384c40a3b42d4e6 482 PANTHER PTHR24362 1 288 8.4E-54 T 19-04-2016 ALIDE2_RS02555 23789594d2a764541384c40a3b42d4e6 482 Pfam PF00582 Universal stress protein family 336 472 3.8E-11 T 19-04-2016 IPR006016 UspA GO:0006950 ALIDE2_RS02555 23789594d2a764541384c40a3b42d4e6 482 SUPERFAMILY SSF52402 351 474 4.77E-13 T 19-04-2016 ALIDE2_RS00695 9dd91a7b242bef0e491a8b8e921621e7 386 SUPERFAMILY SSF53901 255 376 4.49E-24 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00695 9dd91a7b242bef0e491a8b8e921621e7 386 Pfam PF02803 Thiolase, C-terminal domain 255 360 8.3E-7 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS00695 9dd91a7b242bef0e491a8b8e921621e7 386 SUPERFAMILY SSF53901 6 230 4.44E-24 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00695 9dd91a7b242bef0e491a8b8e921621e7 386 PANTHER PTHR18919:SF108 4 386 2.5E-120 T 19-04-2016 ALIDE2_RS00695 9dd91a7b242bef0e491a8b8e921621e7 386 PANTHER PTHR18919 4 386 2.5E-120 T 19-04-2016 ALIDE2_RS00695 9dd91a7b242bef0e491a8b8e921621e7 386 PIRSF PIRSF000429 4 381 1.4E-29 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS00695 9dd91a7b242bef0e491a8b8e921621e7 386 Gene3D G3DSA:3.40.47.10 150 185 1.3E-13 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00695 9dd91a7b242bef0e491a8b8e921621e7 386 Gene3D G3DSA:3.40.47.10 247 373 1.3E-13 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00695 9dd91a7b242bef0e491a8b8e921621e7 386 Gene3D G3DSA:3.40.47.10 200 225 1.3E-15 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00695 9dd91a7b242bef0e491a8b8e921621e7 386 Gene3D G3DSA:3.40.47.10 24 115 1.3E-15 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS22940 5064b9dc3d3e2541678a21b78fc81ed0 177 Pfam PF00436 Single-strand binding protein family 4 108 3.9E-42 T 19-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 ALIDE2_RS22940 5064b9dc3d3e2541678a21b78fc81ed0 177 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 38.436 T 19-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 ALIDE2_RS22940 5064b9dc3d3e2541678a21b78fc81ed0 177 PANTHER PTHR10302 3 149 1.8E-47 T 19-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 ALIDE2_RS22940 5064b9dc3d3e2541678a21b78fc81ed0 177 PANTHER PTHR10302 169 177 1.8E-47 T 19-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 ALIDE2_RS22940 5064b9dc3d3e2541678a21b78fc81ed0 177 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 177 1.8E-53 T 19-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 ALIDE2_RS22940 5064b9dc3d3e2541678a21b78fc81ed0 177 SUPERFAMILY SSF50249 3 177 1.85E-62 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS22940 5064b9dc3d3e2541678a21b78fc81ed0 177 Gene3D G3DSA:2.40.50.140 1 122 7.6E-60 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS22940 5064b9dc3d3e2541678a21b78fc81ed0 177 Gene3D G3DSA:2.40.50.140 157 177 7.6E-60 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS01810 9fffb6596655f87852307dae6d308778 168 SUPERFAMILY SSF52833 1 164 9.96E-33 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS01810 9fffb6596655f87852307dae6d308778 168 Pfam PF08534 Redoxin 3 163 2.6E-35 T 19-04-2016 IPR013740 Redoxin GO:0016491 ALIDE2_RS01810 9fffb6596655f87852307dae6d308778 168 PANTHER PTHR10430 2 165 1.8E-72 T 19-04-2016 ALIDE2_RS01810 9fffb6596655f87852307dae6d308778 168 Gene3D G3DSA:3.40.30.10 1 166 8.4E-59 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS16950 fbfe25da746b1660f09eeedc691a6340 447 Pfam PF00764 Arginosuccinate synthase 16 394 6.2E-58 T 19-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS16950 fbfe25da746b1660f09eeedc691a6340 447 SUPERFAMILY SSF69864 190 442 5.49E-77 T 19-04-2016 ALIDE2_RS16950 fbfe25da746b1660f09eeedc691a6340 447 PANTHER PTHR11587:SF2 1 426 1.7E-169 T 19-04-2016 ALIDE2_RS16950 fbfe25da746b1660f09eeedc691a6340 447 SUPERFAMILY SSF52402 6 184 1.13E-29 T 19-04-2016 ALIDE2_RS16950 fbfe25da746b1660f09eeedc691a6340 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 19-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS16950 fbfe25da746b1660f09eeedc691a6340 447 Gene3D G3DSA:1.10.287.400 377 441 1.0E-31 T 19-04-2016 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS16950 fbfe25da746b1660f09eeedc691a6340 447 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 446 69.831 T 19-04-2016 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS16950 fbfe25da746b1660f09eeedc691a6340 447 PANTHER PTHR11587 1 426 1.7E-169 T 19-04-2016 ALIDE2_RS16950 fbfe25da746b1660f09eeedc691a6340 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 2.1E-158 T 19-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS16950 fbfe25da746b1660f09eeedc691a6340 447 Gene3D G3DSA:3.90.1260.10 175 373 3.7E-64 T 19-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS16950 fbfe25da746b1660f09eeedc691a6340 447 Gene3D G3DSA:3.40.50.620 4 174 6.0E-43 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS16950 fbfe25da746b1660f09eeedc691a6340 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 19-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS20855 e85c2f38646150ea8a7bf86fc7e6fff0 564 PANTHER PTHR30046:SF0 9 564 2.1E-154 T 19-04-2016 ALIDE2_RS20855 e85c2f38646150ea8a7bf86fc7e6fff0 564 PIRSF PIRSF004862 14 564 1.8E-141 T 19-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ALIDE2_RS20855 e85c2f38646150ea8a7bf86fc7e6fff0 564 PANTHER PTHR30046 9 564 2.1E-154 T 19-04-2016 ALIDE2_RS20855 e85c2f38646150ea8a7bf86fc7e6fff0 564 Pfam PF08345 Flagellar M-ring protein C-terminal 261 442 2.3E-46 T 19-04-2016 IPR013556 Flagellar M-ring C-terminal ALIDE2_RS20855 e85c2f38646150ea8a7bf86fc7e6fff0 564 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 30 562 7.2E-115 T 19-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ALIDE2_RS20855 e85c2f38646150ea8a7bf86fc7e6fff0 564 Pfam PF01514 Secretory protein of YscJ/FliF family 38 228 1.2E-70 T 19-04-2016 IPR006182 Secretory protein YscJ/FliF ALIDE2_RS20855 e85c2f38646150ea8a7bf86fc7e6fff0 564 PRINTS PR01009 Flagellar M-ring protein signature 365 389 2.0E-34 T 19-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ALIDE2_RS20855 e85c2f38646150ea8a7bf86fc7e6fff0 564 PRINTS PR01009 Flagellar M-ring protein signature 128 146 2.0E-34 T 19-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ALIDE2_RS20855 e85c2f38646150ea8a7bf86fc7e6fff0 564 PRINTS PR01009 Flagellar M-ring protein signature 160 174 2.0E-34 T 19-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ALIDE2_RS20855 e85c2f38646150ea8a7bf86fc7e6fff0 564 PRINTS PR01009 Flagellar M-ring protein signature 274 292 2.0E-34 T 19-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ALIDE2_RS20855 e85c2f38646150ea8a7bf86fc7e6fff0 564 PRINTS PR01009 Flagellar M-ring protein signature 203 221 2.0E-34 T 19-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ALIDE2_RS21205 78896cdd77a1893ba8cfcf42b588d2bb 313 SUPERFAMILY SSF54593 10 272 3.0E-32 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS21205 78896cdd77a1893ba8cfcf42b588d2bb 313 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 160 267 1.8E-12 T 19-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ALIDE2_RS21205 78896cdd77a1893ba8cfcf42b588d2bb 313 Gene3D G3DSA:3.10.180.10 159 306 5.3E-33 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS21205 78896cdd77a1893ba8cfcf42b588d2bb 313 Gene3D G3DSA:3.10.180.10 10 136 2.1E-13 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS00925 0a7b6a2e88e7bd4bce5c5ec8638326dc 305 Gene3D G3DSA:3.40.190.10 179 266 8.1E-19 T 19-04-2016 ALIDE2_RS00925 0a7b6a2e88e7bd4bce5c5ec8638326dc 305 PANTHER PTHR30419 1 298 1.6E-136 T 19-04-2016 ALIDE2_RS00925 0a7b6a2e88e7bd4bce5c5ec8638326dc 305 Gene3D G3DSA:3.40.190.10 94 178 2.0E-24 T 19-04-2016 ALIDE2_RS00925 0a7b6a2e88e7bd4bce5c5ec8638326dc 305 Pfam PF03466 LysR substrate binding domain 92 295 3.2E-40 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS00925 0a7b6a2e88e7bd4bce5c5ec8638326dc 305 PANTHER PTHR30419:SF2 1 298 1.6E-136 T 19-04-2016 ALIDE2_RS00925 0a7b6a2e88e7bd4bce5c5ec8638326dc 305 SUPERFAMILY SSF53850 92 299 6.92E-44 T 19-04-2016 ALIDE2_RS00925 0a7b6a2e88e7bd4bce5c5ec8638326dc 305 SUPERFAMILY SSF46785 3 115 1.4E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00925 0a7b6a2e88e7bd4bce5c5ec8638326dc 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 3.3E-15 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00925 0a7b6a2e88e7bd4bce5c5ec8638326dc 305 Gene3D G3DSA:1.10.10.10 5 88 4.5E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS03980 c1aaceebcd9957c9938a5fc82d093e52 713 Pfam PF00263 Bacterial type II and III secretion system protein 552 706 1.3E-45 T 19-04-2016 IPR004846 Type II/III secretion system GO:0009306 ALIDE2_RS03980 c1aaceebcd9957c9938a5fc82d093e52 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 694 708 7.7E-21 T 19-04-2016 IPR001775 GspD/PilQ family ALIDE2_RS03980 c1aaceebcd9957c9938a5fc82d093e52 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 447 457 7.7E-21 T 19-04-2016 IPR001775 GspD/PilQ family ALIDE2_RS03980 c1aaceebcd9957c9938a5fc82d093e52 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 548 572 7.7E-21 T 19-04-2016 IPR001775 GspD/PilQ family ALIDE2_RS03980 c1aaceebcd9957c9938a5fc82d093e52 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 671 689 7.7E-21 T 19-04-2016 IPR001775 GspD/PilQ family ALIDE2_RS03980 c1aaceebcd9957c9938a5fc82d093e52 713 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 275 706 4.4E-150 T 19-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 ALIDE2_RS03980 c1aaceebcd9957c9938a5fc82d093e52 713 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 652 685 - T 19-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 ALIDE2_RS03980 c1aaceebcd9957c9938a5fc82d093e52 713 Pfam PF03958 Bacterial type II/III secretion system short domain 373 447 1.4E-12 T 19-04-2016 IPR005644 NolW-like ALIDE2_RS03980 c1aaceebcd9957c9938a5fc82d093e52 713 Pfam PF11741 AMIN domain 47 126 6.5E-10 T 19-04-2016 IPR021731 AMIN domain ALIDE2_RS03980 c1aaceebcd9957c9938a5fc82d093e52 713 PANTHER PTHR30604 150 713 1.8E-104 T 19-04-2016 ALIDE2_RS03980 c1aaceebcd9957c9938a5fc82d093e52 713 SMART SM00965 300 348 2.8E-6 T 19-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ALIDE2_RS13290 8a55ad75cfbd31496e0d444ee800c99b 312 PANTHER PTHR30425 6 311 6.5E-147 T 19-04-2016 ALIDE2_RS13290 8a55ad75cfbd31496e0d444ee800c99b 312 Gene3D G3DSA:1.10.3720.10 19 308 5.6E-37 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS13290 8a55ad75cfbd31496e0d444ee800c99b 312 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 8 303 2.0E-94 T 19-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 ALIDE2_RS13290 8a55ad75cfbd31496e0d444ee800c99b 312 SUPERFAMILY SSF161098 20 296 2.62E-33 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS13290 8a55ad75cfbd31496e0d444ee800c99b 312 PANTHER PTHR30425:SF1 6 311 6.5E-147 T 19-04-2016 ALIDE2_RS13290 8a55ad75cfbd31496e0d444ee800c99b 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 305 4.8E-19 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS11235 3cf10cce4db6963d4ba152e310207b39 181 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 38 165 9.4E-34 T 19-04-2016 IPR011605 NusB antitermination factor GO:0006353 ALIDE2_RS11235 3cf10cce4db6963d4ba152e310207b39 181 PANTHER PTHR11078 38 180 6.6E-34 T 19-04-2016 IPR011605 NusB antitermination factor GO:0006353 ALIDE2_RS11235 3cf10cce4db6963d4ba152e310207b39 181 Gene3D G3DSA:1.10.940.10 36 170 8.2E-36 T 19-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ALIDE2_RS11235 3cf10cce4db6963d4ba152e310207b39 181 Pfam PF01029 NusB family 40 162 4.7E-31 T 19-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ALIDE2_RS11235 3cf10cce4db6963d4ba152e310207b39 181 SUPERFAMILY SSF48013 36 167 1.01E-37 T 19-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ALIDE2_RS11235 3cf10cce4db6963d4ba152e310207b39 181 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 36 167 19.405 T 19-04-2016 IPR011605 NusB antitermination factor GO:0006353 ALIDE2_RS06035 cf53ed476d18acb35b277073454cd56f 156 Pfam PF06445 GyrI-like small molecule binding domain 1 156 4.4E-38 T 19-04-2016 IPR029442 GyrI-like small molecule binding domain ALIDE2_RS06035 cf53ed476d18acb35b277073454cd56f 156 PANTHER PTHR40055 1 137 1.0E-22 T 19-04-2016 ALIDE2_RS06035 cf53ed476d18acb35b277073454cd56f 156 SUPERFAMILY SSF55136 1 143 1.47E-38 T 19-04-2016 IPR011256 Regulatory factor, effector binding domain ALIDE2_RS06035 cf53ed476d18acb35b277073454cd56f 156 SMART SM00871 1 156 2.5E-40 T 19-04-2016 IPR010499 Bacterial transcription activator, effector binding ALIDE2_RS06035 cf53ed476d18acb35b277073454cd56f 156 Gene3D G3DSA:3.20.80.10 1 156 2.2E-48 T 19-04-2016 IPR011256 Regulatory factor, effector binding domain ALIDE2_RS06035 cf53ed476d18acb35b277073454cd56f 156 PANTHER PTHR40055:SF1 1 137 1.0E-22 T 19-04-2016 ALIDE2_RS13755 d8a9a7098507aa6adaa47be013ac409c 95 TIGRFAM TIGR03742 PRTRC_F: PRTRC system protein F 3 92 1.5E-28 T 19-04-2016 IPR022283 ParB-related, ThiF-related cassette, protein F ALIDE2_RS13755 d8a9a7098507aa6adaa47be013ac409c 95 Pfam PF14456 Alpha-helical domain 2 9 92 1.0E-23 T 19-04-2016 ALIDE2_RS20080 c0755a197dd4e015245fac13d4900bd5 401 Pfam PF13458 Periplasmic binding protein 26 363 1.3E-83 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS20080 c0755a197dd4e015245fac13d4900bd5 401 PANTHER PTHR30483:SF17 7 400 1.2E-175 T 19-04-2016 ALIDE2_RS20080 c0755a197dd4e015245fac13d4900bd5 401 Gene3D G3DSA:3.40.50.2300 151 301 7.4E-18 T 19-04-2016 ALIDE2_RS20080 c0755a197dd4e015245fac13d4900bd5 401 Gene3D G3DSA:3.40.50.2300 21 145 1.4E-27 T 19-04-2016 ALIDE2_RS20080 c0755a197dd4e015245fac13d4900bd5 401 Gene3D G3DSA:3.40.50.2300 302 338 1.4E-27 T 19-04-2016 ALIDE2_RS20080 c0755a197dd4e015245fac13d4900bd5 401 SUPERFAMILY SSF53822 26 397 8.24E-90 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS20080 c0755a197dd4e015245fac13d4900bd5 401 PANTHER PTHR30483 7 400 1.2E-175 T 19-04-2016 ALIDE2_RS14520 a90b45b839715cfa60080b88438fa02e 425 Gene3D G3DSA:3.90.1150.10 286 424 3.5E-49 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS14520 a90b45b839715cfa60080b88438fa02e 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 422 3.1E-191 T 19-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 ALIDE2_RS14520 a90b45b839715cfa60080b88438fa02e 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 422 1.4E-140 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS14520 a90b45b839715cfa60080b88438fa02e 425 PANTHER PTHR11808 264 425 2.2E-232 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS14520 a90b45b839715cfa60080b88438fa02e 425 PANTHER PTHR11808 1 234 2.2E-232 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS14520 a90b45b839715cfa60080b88438fa02e 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS14520 a90b45b839715cfa60080b88438fa02e 425 PANTHER PTHR11808:SF12 264 425 2.2E-232 T 19-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 ALIDE2_RS14520 a90b45b839715cfa60080b88438fa02e 425 PANTHER PTHR11808:SF12 1 234 2.2E-232 T 19-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 ALIDE2_RS14520 a90b45b839715cfa60080b88438fa02e 425 PIRSF PIRSF001434 1 425 3.1E-131 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS14520 a90b45b839715cfa60080b88438fa02e 425 Gene3D G3DSA:3.40.640.10 2 285 4.8E-121 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS14520 a90b45b839715cfa60080b88438fa02e 425 SUPERFAMILY SSF53383 1 423 1.08E-130 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS19475 8fb86f4543a5c4201127952a4cd43051 214 Gene3D G3DSA:3.40.810.20 9 211 2.0E-73 T 19-04-2016 ALIDE2_RS19475 8fb86f4543a5c4201127952a4cd43051 214 SUPERFAMILY SSF100950 10 212 3.3E-59 T 19-04-2016 ALIDE2_RS19475 8fb86f4543a5c4201127952a4cd43051 214 Pfam PF01144 Coenzyme A transferase 11 199 2.5E-35 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS19475 8fb86f4543a5c4201127952a4cd43051 214 SMART SM00882 10 207 4.7E-62 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS19475 8fb86f4543a5c4201127952a4cd43051 214 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 8 207 3.8E-84 T 19-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 ALIDE2_RS19475 8fb86f4543a5c4201127952a4cd43051 214 PANTHER PTHR13707 13 203 1.1E-78 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS19475 8fb86f4543a5c4201127952a4cd43051 214 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 48 56 - T 19-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 ALIDE2_RS23050 55f154c4f6b782a038f35e1834b22f8d 292 Pfam PF01614 Bacterial transcriptional regulator 166 285 2.5E-9 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS23050 55f154c4f6b782a038f35e1834b22f8d 292 Pfam PF09339 IclR helix-turn-helix domain 48 99 4.3E-8 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS23050 55f154c4f6b782a038f35e1834b22f8d 292 SMART SM00346 46 136 2.1E-9 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS23050 55f154c4f6b782a038f35e1834b22f8d 292 Gene3D G3DSA:3.30.450.40 117 288 9.6E-30 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS23050 55f154c4f6b782a038f35e1834b22f8d 292 PANTHER PTHR30136 22 288 2.2E-31 T 19-04-2016 ALIDE2_RS23050 55f154c4f6b782a038f35e1834b22f8d 292 SUPERFAMILY SSF46785 46 119 1.29E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23050 55f154c4f6b782a038f35e1834b22f8d 292 Gene3D G3DSA:1.10.10.10 45 116 8.0E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23050 55f154c4f6b782a038f35e1834b22f8d 292 SUPERFAMILY SSF55781 120 288 1.37E-26 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS14505 cd087a21a1c42296933d465a24cc4e4b 358 PANTHER PTHR11079 3 152 1.2E-48 T 19-04-2016 ALIDE2_RS14505 cd087a21a1c42296933d465a24cc4e4b 358 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 93 - T 19-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ALIDE2_RS14505 cd087a21a1c42296933d465a24cc4e4b 358 PRINTS PR00412 Epoxide hydrolase signature 235 250 8.1E-6 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS14505 cd087a21a1c42296933d465a24cc4e4b 358 PRINTS PR00412 Epoxide hydrolase signature 215 233 8.1E-6 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS14505 cd087a21a1c42296933d465a24cc4e4b 358 Pfam PF14437 MafB19-like deaminase 6 152 1.2E-33 T 19-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 ALIDE2_RS14505 cd087a21a1c42296933d465a24cc4e4b 358 Gene3D G3DSA:3.40.50.1820 166 283 1.1E-29 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS14505 cd087a21a1c42296933d465a24cc4e4b 358 Gene3D G3DSA:3.40.140.10 2 150 4.2E-64 T 19-04-2016 ALIDE2_RS14505 cd087a21a1c42296933d465a24cc4e4b 358 SUPERFAMILY SSF53474 177 284 1.47E-23 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS14505 cd087a21a1c42296933d465a24cc4e4b 358 Pfam PF00561 alpha/beta hydrolase fold 212 282 3.2E-7 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS14505 cd087a21a1c42296933d465a24cc4e4b 358 SUPERFAMILY SSF53927 3 153 7.53E-58 T 19-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 ALIDE2_RS14505 cd087a21a1c42296933d465a24cc4e4b 358 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 152 50.311 T 19-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 ALIDE2_RS14455 6f54b71ece5bf34d2cf5a4c9cb8ca9a8 323 SUPERFAMILY SSF53850 113 288 3.75E-14 T 19-04-2016 ALIDE2_RS14455 6f54b71ece5bf34d2cf5a4c9cb8ca9a8 323 Gene3D G3DSA:3.40.190.10 126 216 4.0E-4 T 19-04-2016 ALIDE2_RS14455 6f54b71ece5bf34d2cf5a4c9cb8ca9a8 323 PANTHER PTHR30349:SF23 1 322 2.0E-64 T 19-04-2016 ALIDE2_RS14455 6f54b71ece5bf34d2cf5a4c9cb8ca9a8 323 PANTHER PTHR30349 1 322 2.0E-64 T 19-04-2016 ALIDE2_RS14455 6f54b71ece5bf34d2cf5a4c9cb8ca9a8 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 319 6.0E-58 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS14455 6f54b71ece5bf34d2cf5a4c9cb8ca9a8 323 PIRSF PIRSF017082 1 323 9.5E-107 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01590 6ab54812c94b7cf90169d52c181ad503 347 SUPERFAMILY SSF53067 154 342 3.7E-48 T 19-04-2016 ALIDE2_RS01590 6ab54812c94b7cf90169d52c181ad503 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.2E-152 T 19-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 ALIDE2_RS01590 6ab54812c94b7cf90169d52c181ad503 347 PANTHER PTHR19375:SF117 9 332 1.3E-172 T 19-04-2016 ALIDE2_RS01590 6ab54812c94b7cf90169d52c181ad503 347 PANTHER PTHR19375 9 332 1.3E-172 T 19-04-2016 ALIDE2_RS01590 6ab54812c94b7cf90169d52c181ad503 347 Gene3D G3DSA:3.30.420.40 268 322 4.7E-33 T 19-04-2016 ALIDE2_RS01590 6ab54812c94b7cf90169d52c181ad503 347 Gene3D G3DSA:3.30.420.40 165 191 4.7E-33 T 19-04-2016 ALIDE2_RS01590 6ab54812c94b7cf90169d52c181ad503 347 Pfam PF06723 MreB/Mbl protein 11 339 6.8E-146 T 19-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 ALIDE2_RS01590 6ab54812c94b7cf90169d52c181ad503 347 Gene3D G3DSA:3.30.420.40 10 164 7.7E-43 T 19-04-2016 ALIDE2_RS01590 6ab54812c94b7cf90169d52c181ad503 347 Gene3D G3DSA:3.90.640.10 192 264 3.3E-30 T 19-04-2016 ALIDE2_RS01590 6ab54812c94b7cf90169d52c181ad503 347 SUPERFAMILY SSF53067 9 153 1.77E-36 T 19-04-2016 ALIDE2_RS01590 6ab54812c94b7cf90169d52c181ad503 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 5.15E-61 T 19-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 ALIDE2_RS01590 6ab54812c94b7cf90169d52c181ad503 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 5.15E-61 T 19-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 ALIDE2_RS01590 6ab54812c94b7cf90169d52c181ad503 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 5.15E-61 T 19-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 ALIDE2_RS01590 6ab54812c94b7cf90169d52c181ad503 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 5.15E-61 T 19-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 ALIDE2_RS01590 6ab54812c94b7cf90169d52c181ad503 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 5.15E-61 T 19-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 ALIDE2_RS18380 86f7ce8c6179c994e5105bd6e731ef99 778 SMART SM00843 711 776 9.5E-35 T 19-04-2016 IPR018541 FtsK gamma domain ALIDE2_RS18380 86f7ce8c6179c994e5105bd6e731ef99 778 PANTHER PTHR22683:SF41 213 776 3.7E-254 T 19-04-2016 ALIDE2_RS18380 86f7ce8c6179c994e5105bd6e731ef99 778 Gene3D G3DSA:3.40.50.300 369 672 4.9E-96 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18380 86f7ce8c6179c994e5105bd6e731ef99 778 SUPERFAMILY SSF52540 370 677 5.84E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18380 86f7ce8c6179c994e5105bd6e731ef99 778 Pfam PF01580 FtsK/SpoIIIE family 396 605 5.9E-65 T 19-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 ALIDE2_RS18380 86f7ce8c6179c994e5105bd6e731ef99 778 SUPERFAMILY SSF46785 711 775 3.67E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18380 86f7ce8c6179c994e5105bd6e731ef99 778 PANTHER PTHR22683 213 776 3.7E-254 T 19-04-2016 ALIDE2_RS18380 86f7ce8c6179c994e5105bd6e731ef99 778 Pfam PF09397 Ftsk gamma domain 713 773 2.6E-25 T 19-04-2016 IPR018541 FtsK gamma domain ALIDE2_RS18380 86f7ce8c6179c994e5105bd6e731ef99 778 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 24 206 3.1E-49 T 19-04-2016 IPR025199 DNA translocase FtsK, 4TM region ALIDE2_RS11415 fef78ea09441253f357d3d9644745001 156 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 1.1E-23 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ALIDE2_RS11415 fef78ea09441253f357d3d9644745001 156 PANTHER PTHR30154:SF28 1 152 7.8E-62 T 19-04-2016 ALIDE2_RS11415 fef78ea09441253f357d3d9644745001 156 SUPERFAMILY SSF46785 2 62 1.54E-16 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11415 fef78ea09441253f357d3d9644745001 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.3E-18 T 19-04-2016 ALIDE2_RS11415 fef78ea09441253f357d3d9644745001 156 SUPERFAMILY SSF54909 63 152 2.41E-21 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel ALIDE2_RS11415 fef78ea09441253f357d3d9644745001 156 PANTHER PTHR30154 1 152 7.8E-62 T 19-04-2016 ALIDE2_RS11415 fef78ea09441253f357d3d9644745001 156 Gene3D G3DSA:3.30.70.920 57 152 2.7E-29 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ALIDE2_RS11415 fef78ea09441253f357d3d9644745001 156 Gene3D G3DSA:1.10.10.10 1 54 9.3E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11415 fef78ea09441253f357d3d9644745001 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.1E-12 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS11415 fef78ea09441253f357d3d9644745001 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.1E-12 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS11415 fef78ea09441253f357d3d9644745001 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.1E-12 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS11415 fef78ea09441253f357d3d9644745001 156 SMART SM00344 3 112 1.4E-46 T 19-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ALIDE2_RS01790 8f3cc22c1025878b76071af8b3b448cf 290 Pfam PF07650 KH domain 38 110 1.1E-19 T 19-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 ALIDE2_RS01790 8f3cc22c1025878b76071af8b3b448cf 290 SMART SM00322 60 125 6.3E-8 T 19-04-2016 IPR004087 K Homology domain GO:0003676 ALIDE2_RS01790 8f3cc22c1025878b76071af8b3b448cf 290 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.979 T 19-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS01790 8f3cc22c1025878b76071af8b3b448cf 290 Gene3D G3DSA:3.30.300.20 17 107 5.6E-32 T 19-04-2016 IPR015946 K homology domain-like, alpha/beta ALIDE2_RS01790 8f3cc22c1025878b76071af8b3b448cf 290 Gene3D G3DSA:3.30.1140.32 108 206 1.6E-45 T 19-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01790 8f3cc22c1025878b76071af8b3b448cf 290 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 19-04-2016 IPR018280 Ribosomal protein S3, conserved site ALIDE2_RS01790 8f3cc22c1025878b76071af8b3b448cf 290 PANTHER PTHR11760:SF19 2 244 6.0E-127 T 19-04-2016 ALIDE2_RS01790 8f3cc22c1025878b76071af8b3b448cf 290 SUPERFAMILY SSF54814 2 106 1.36E-36 T 19-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 ALIDE2_RS01790 8f3cc22c1025878b76071af8b3b448cf 290 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 9.7E-41 T 19-04-2016 ALIDE2_RS01790 8f3cc22c1025878b76071af8b3b448cf 290 PANTHER PTHR11760 2 244 6.0E-127 T 19-04-2016 ALIDE2_RS01790 8f3cc22c1025878b76071af8b3b448cf 290 SUPERFAMILY SSF54821 108 206 1.96E-39 T 19-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01790 8f3cc22c1025878b76071af8b3b448cf 290 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 7.1E-93 T 19-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS21590 0db091e8aad147a719a72a30871f87fc 121 Gene3D G3DSA:4.10.910.10 73 121 2.4E-26 T 19-04-2016 IPR027437 30s ribosomal protein S13, C-terminal ALIDE2_RS21590 0db091e8aad147a719a72a30871f87fc 121 Gene3D G3DSA:1.10.8.50 1 71 3.1E-28 T 19-04-2016 ALIDE2_RS21590 0db091e8aad147a719a72a30871f87fc 121 Pfam PF00416 Ribosomal protein S13/S18 63 108 2.7E-17 T 19-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21590 0db091e8aad147a719a72a30871f87fc 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 7.5E-53 T 19-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21590 0db091e8aad147a719a72a30871f87fc 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 19-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21590 0db091e8aad147a719a72a30871f87fc 121 PANTHER PTHR10871 1 121 7.7E-61 T 19-04-2016 ALIDE2_RS21590 0db091e8aad147a719a72a30871f87fc 121 SUPERFAMILY SSF46946 2 114 5.18E-45 T 19-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ALIDE2_RS21590 0db091e8aad147a719a72a30871f87fc 121 PIRSF PIRSF002134 1 121 1.2E-41 T 19-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21590 0db091e8aad147a719a72a30871f87fc 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.373 T 19-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 SUPERFAMILY SSF50621 270 424 5.86E-51 T 19-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 PANTHER PTHR11482:SF5 14 429 1.3E-168 T 19-04-2016 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 297 400 3.8E-18 T 19-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 PRINTS PR01181 Diaminopimelate decarboxylase signature 172 181 4.5E-29 T 19-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 PRINTS PR01181 Diaminopimelate decarboxylase signature 390 412 4.5E-29 T 19-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 PRINTS PR01181 Diaminopimelate decarboxylase signature 309 327 4.5E-29 T 19-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 PRINTS PR01181 Diaminopimelate decarboxylase signature 83 100 4.5E-29 T 19-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 Gene3D G3DSA:2.40.37.10 285 424 9.3E-47 T 19-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 SUPERFAMILY SSF51419 34 293 1.06E-79 T 19-04-2016 IPR029066 PLP-binding barrel ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 47 291 1.6E-67 T 19-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 15 422 8.1E-156 T 19-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 PANTHER PTHR11482 14 429 1.3E-168 T 19-04-2016 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 Gene3D G3DSA:3.20.20.10 47 284 3.7E-80 T 19-04-2016 IPR029066 PLP-binding barrel ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 85 97 9.4E-24 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 198 211 9.4E-24 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 380 393 9.4E-24 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 281 300 9.4E-24 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 65 83 9.4E-24 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 ALIDE2_RS03945 bf3f6c4ee1964f59ef7e0798583478da 429 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 23 423 40.877 T 19-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS06080 e0cfd81173aa8d6a3d2a0c0e9c29f62d 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 2.0E-72 T 19-04-2016 IPR010650 PrkA C-terminal domain ALIDE2_RS06080 e0cfd81173aa8d6a3d2a0c0e9c29f62d 640 PIRSF PIRSF000549 1 640 5.6E-287 T 19-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 ALIDE2_RS06080 e0cfd81173aa8d6a3d2a0c0e9c29f62d 640 Pfam PF08298 PrkA AAA domain 19 376 9.5E-171 T 19-04-2016 IPR013153 PrkA AAA domain ALIDE2_RS06080 e0cfd81173aa8d6a3d2a0c0e9c29f62d 640 SMART SM00763 19 376 1.5E-209 T 19-04-2016 IPR013153 PrkA AAA domain ALIDE2_RS06080 e0cfd81173aa8d6a3d2a0c0e9c29f62d 640 PANTHER PTHR30267:SF2 1 640 6.4E-265 T 19-04-2016 ALIDE2_RS06080 e0cfd81173aa8d6a3d2a0c0e9c29f62d 640 Gene3D G3DSA:3.40.50.300 75 154 5.1E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06080 e0cfd81173aa8d6a3d2a0c0e9c29f62d 640 Gene3D G3DSA:3.40.50.300 239 325 5.1E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06080 e0cfd81173aa8d6a3d2a0c0e9c29f62d 640 SUPERFAMILY SSF52540 75 345 1.14E-19 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06080 e0cfd81173aa8d6a3d2a0c0e9c29f62d 640 PANTHER PTHR30267 1 640 6.4E-265 T 19-04-2016 ALIDE2_RS22820 965e948635ed20c3af554638490a2e97 208 SUPERFAMILY SSF49879 3 105 4.02E-28 T 19-04-2016 IPR008984 SMAD/FHA domain GO:0005515 ALIDE2_RS22820 965e948635ed20c3af554638490a2e97 208 PANTHER PTHR15715 1 86 1.0E-14 T 19-04-2016 ALIDE2_RS22820 965e948635ed20c3af554638490a2e97 208 Gene3D G3DSA:2.60.200.20 2 93 4.7E-26 T 19-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ALIDE2_RS22820 965e948635ed20c3af554638490a2e97 208 Gene3D G3DSA:2.60.200.20 118 206 1.1E-5 T 19-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ALIDE2_RS22820 965e948635ed20c3af554638490a2e97 208 SMART SM00240 22 72 2.5E-14 T 19-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ALIDE2_RS22820 965e948635ed20c3af554638490a2e97 208 SUPERFAMILY SSF49879 126 206 5.47E-7 T 19-04-2016 IPR008984 SMAD/FHA domain GO:0005515 ALIDE2_RS22820 965e948635ed20c3af554638490a2e97 208 Pfam PF00498 FHA domain 23 86 2.5E-17 T 19-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ALIDE2_RS12845 78916712b84c4c02a0ae3217568f665b 449 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 68 347 1.1E-41 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ALIDE2_RS12845 78916712b84c4c02a0ae3217568f665b 449 PANTHER PTHR30572 61 348 1.1E-66 T 19-04-2016 ALIDE2_RS12845 78916712b84c4c02a0ae3217568f665b 449 Gene3D G3DSA:2.40.50.100 214 245 1.9E-16 T 19-04-2016 ALIDE2_RS12845 78916712b84c4c02a0ae3217568f665b 449 Gene3D G3DSA:2.40.50.100 89 122 1.9E-16 T 19-04-2016 ALIDE2_RS12845 78916712b84c4c02a0ae3217568f665b 449 PANTHER PTHR30572:SF1 61 348 1.1E-66 T 19-04-2016 ALIDE2_RS12845 78916712b84c4c02a0ae3217568f665b 449 SUPERFAMILY SSF111369 77 330 7.85E-18 T 19-04-2016 ALIDE2_RS12845 78916712b84c4c02a0ae3217568f665b 449 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 83 326 6.3E-18 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS06575 0d911dbd2e8a5692dbff31b8caed88f8 456 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 247 265 - T 19-04-2016 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1|UniPathway: UPA00332 ALIDE2_RS06575 0d911dbd2e8a5692dbff31b8caed88f8 456 Gene3D G3DSA:3.40.640.10 60 296 2.1E-82 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS06575 0d911dbd2e8a5692dbff31b8caed88f8 456 PANTHER PTHR32325 1 450 3.3E-164 T 19-04-2016 ALIDE2_RS06575 0d911dbd2e8a5692dbff31b8caed88f8 456 PIRSF PIRSF001386 1 456 1.3E-191 T 19-04-2016 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1|UniPathway: UPA00332 ALIDE2_RS06575 0d911dbd2e8a5692dbff31b8caed88f8 456 SUPERFAMILY SSF53383 4 452 2.75E-124 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS06575 0d911dbd2e8a5692dbff31b8caed88f8 456 Gene3D G3DSA:3.90.1150.10 297 453 3.2E-54 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS06575 0d911dbd2e8a5692dbff31b8caed88f8 456 Pfam PF01212 Beta-eliminating lyase 47 422 2.4E-81 T 19-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 ALIDE2_RS15075 f5c2c4356c9bfdf8ceea78459b2e3c5c 288 Gene3D G3DSA:3.40.50.620 156 288 1.6E-22 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS15075 f5c2c4356c9bfdf8ceea78459b2e3c5c 288 SUPERFAMILY SSF52402 171 288 3.43E-21 T 19-04-2016 ALIDE2_RS15075 f5c2c4356c9bfdf8ceea78459b2e3c5c 288 SUPERFAMILY SSF52402 3 160 7.7E-13 T 19-04-2016 ALIDE2_RS15075 f5c2c4356c9bfdf8ceea78459b2e3c5c 288 Pfam PF00582 Universal stress protein family 206 288 5.3E-11 T 19-04-2016 IPR006016 UspA GO:0006950 ALIDE2_RS15075 f5c2c4356c9bfdf8ceea78459b2e3c5c 288 Pfam PF00582 Universal stress protein family 7 159 8.9E-7 T 19-04-2016 IPR006016 UspA GO:0006950 ALIDE2_RS15075 f5c2c4356c9bfdf8ceea78459b2e3c5c 288 PRINTS PR01438 Universal stress protein signature 248 260 2.3E-7 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS15075 f5c2c4356c9bfdf8ceea78459b2e3c5c 288 PRINTS PR01438 Universal stress protein signature 266 288 2.3E-7 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS15075 f5c2c4356c9bfdf8ceea78459b2e3c5c 288 PRINTS PR01438 Universal stress protein signature 168 186 2.3E-7 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS15075 f5c2c4356c9bfdf8ceea78459b2e3c5c 288 Gene3D G3DSA:3.40.50.620 4 155 1.7E-12 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS09270 5d9ba729e231df6cb1e3b9bf70e8c874 319 Pfam PF03060 Nitronate monooxygenase 13 254 2.2E-20 T 19-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ALIDE2_RS09270 5d9ba729e231df6cb1e3b9bf70e8c874 319 PANTHER PTHR32332 1 312 2.1E-133 T 19-04-2016 ALIDE2_RS09270 5d9ba729e231df6cb1e3b9bf70e8c874 319 Gene3D G3DSA:3.20.20.70 10 298 1.4E-42 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS09270 5d9ba729e231df6cb1e3b9bf70e8c874 319 PANTHER PTHR32332:SF21 1 312 2.1E-133 T 19-04-2016 ALIDE2_RS09270 5d9ba729e231df6cb1e3b9bf70e8c874 319 SUPERFAMILY SSF51412 5 305 1.47E-56 T 19-04-2016 ALIDE2_RS06755 b93883585cf3752c1abe57fd1848e68a 304 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 167 4.0E-46 T 19-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 ALIDE2_RS06755 b93883585cf3752c1abe57fd1848e68a 304 Gene3D G3DSA:3.40.50.720 5 168 6.9E-54 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS06755 b93883585cf3752c1abe57fd1848e68a 304 SUPERFAMILY SSF51735 6 167 1.61E-41 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS06755 b93883585cf3752c1abe57fd1848e68a 304 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 7 298 3.9E-122 T 19-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 ALIDE2_RS06755 b93883585cf3752c1abe57fd1848e68a 304 PIRSF PIRSF000103 2 299 3.5E-72 T 19-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 ALIDE2_RS06755 b93883585cf3752c1abe57fd1848e68a 304 PANTHER PTHR22981 1 304 1.2E-129 T 19-04-2016 ALIDE2_RS06755 b93883585cf3752c1abe57fd1848e68a 304 Gene3D G3DSA:1.10.1040.10 170 297 1.7E-41 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS06755 b93883585cf3752c1abe57fd1848e68a 304 PANTHER PTHR22981:SF70 1 304 1.2E-129 T 19-04-2016 ALIDE2_RS06755 b93883585cf3752c1abe57fd1848e68a 304 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 290 3.7E-38 T 19-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ALIDE2_RS06755 b93883585cf3752c1abe57fd1848e68a 304 SUPERFAMILY SSF48179 169 297 3.85E-38 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS21215 1b48781d85b8c12bce0b27da59d7b34f 282 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 277 3.3E-62 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS21215 1b48781d85b8c12bce0b27da59d7b34f 282 SUPERFAMILY SSF56529 60 279 1.44E-75 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS21215 1b48781d85b8c12bce0b27da59d7b34f 282 PANTHER PTHR11820 1 282 7.6E-96 T 19-04-2016 ALIDE2_RS21215 1b48781d85b8c12bce0b27da59d7b34f 282 Gene3D G3DSA:3.90.850.10 64 281 5.9E-76 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS21215 1b48781d85b8c12bce0b27da59d7b34f 282 PANTHER PTHR11820:SF6 1 282 7.6E-96 T 19-04-2016 ALIDE2_RS18000 37d693cc9a626a823472c9205565ac8a 294 SUPERFAMILY SSF53474 58 291 2.3E-46 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS18000 37d693cc9a626a823472c9205565ac8a 294 Gene3D G3DSA:3.40.50.1820 58 291 7.1E-63 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS18000 37d693cc9a626a823472c9205565ac8a 294 PANTHER PTHR17630 63 291 5.9E-89 T 19-04-2016 ALIDE2_RS18000 37d693cc9a626a823472c9205565ac8a 294 Pfam PF01738 Dienelactone hydrolase family 68 291 9.1E-61 T 19-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 ALIDE2_RS18000 37d693cc9a626a823472c9205565ac8a 294 PANTHER PTHR17630:SF42 63 291 5.9E-89 T 19-04-2016 ALIDE2_RS12635 b8d097fb61cebdd10780a494193dde09 335 PANTHER PTHR11516 4 33 1.0E-117 T 19-04-2016 ALIDE2_RS12635 b8d097fb61cebdd10780a494193dde09 335 PANTHER PTHR11516 51 334 1.0E-117 T 19-04-2016 ALIDE2_RS12635 b8d097fb61cebdd10780a494193dde09 335 SUPERFAMILY SSF52518 4 335 1.02E-89 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS12635 b8d097fb61cebdd10780a494193dde09 335 PANTHER PTHR11516:SF25 4 33 1.0E-117 T 19-04-2016 ALIDE2_RS12635 b8d097fb61cebdd10780a494193dde09 335 PANTHER PTHR11516:SF25 51 334 1.0E-117 T 19-04-2016 ALIDE2_RS12635 b8d097fb61cebdd10780a494193dde09 335 Gene3D G3DSA:3.40.50.970 3 334 3.0E-118 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS12635 b8d097fb61cebdd10780a494193dde09 335 Pfam PF00676 Dehydrogenase E1 component 53 326 2.9E-79 T 19-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 ALIDE2_RS14040 e46c2b1c7b0f339f11ee7c5df51d75d8 350 Pfam PF01409 tRNA synthetases class II core domain (F) 92 349 6.1E-89 T 19-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 ALIDE2_RS14040 e46c2b1c7b0f339f11ee7c5df51d75d8 350 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 349 4.7E-91 T 19-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ALIDE2_RS14040 e46c2b1c7b0f339f11ee7c5df51d75d8 350 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 4.0E-22 T 19-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ALIDE2_RS14040 e46c2b1c7b0f339f11ee7c5df51d75d8 350 SUPERFAMILY SSF46589 16 99 1.1E-18 T 19-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 ALIDE2_RS14040 e46c2b1c7b0f339f11ee7c5df51d75d8 350 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 349 44.85 T 19-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 ALIDE2_RS14040 e46c2b1c7b0f339f11ee7c5df51d75d8 350 PANTHER PTHR11538 90 185 1.7E-86 T 19-04-2016 ALIDE2_RS14040 e46c2b1c7b0f339f11ee7c5df51d75d8 350 PANTHER PTHR11538 202 349 1.7E-86 T 19-04-2016 ALIDE2_RS14040 e46c2b1c7b0f339f11ee7c5df51d75d8 350 PANTHER PTHR11538 39 52 1.7E-86 T 19-04-2016 ALIDE2_RS14040 e46c2b1c7b0f339f11ee7c5df51d75d8 350 SUPERFAMILY SSF55681 92 349 2.74E-70 T 19-04-2016 ALIDE2_RS14040 e46c2b1c7b0f339f11ee7c5df51d75d8 350 Gene3D G3DSA:3.30.930.10 9 350 1.5E-121 T 19-04-2016 ALIDE2_RS07595 c526e5cd34099c0d33df64c10a11b27b 476 SUPERFAMILY SSF103378 3 465 2.88E-88 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS07595 c526e5cd34099c0d33df64c10a11b27b 476 PANTHER PTHR16943:SF8 1 463 3.5E-44 T 19-04-2016 ALIDE2_RS07595 c526e5cd34099c0d33df64c10a11b27b 476 Pfam PF03972 MmgE/PrpD family 7 459 1.1E-84 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS07595 c526e5cd34099c0d33df64c10a11b27b 476 Gene3D G3DSA:3.30.1330.120 279 404 1.8E-8 T 19-04-2016 ALIDE2_RS07595 c526e5cd34099c0d33df64c10a11b27b 476 PANTHER PTHR16943 1 463 3.5E-44 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 PRINTS PR00145 Argininosuccinate lyase family signature 292 308 1.1E-67 T 19-04-2016 ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 PRINTS PR00145 Argininosuccinate lyase family signature 210 226 1.1E-67 T 19-04-2016 ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 PRINTS PR00145 Argininosuccinate lyase family signature 248 272 1.1E-67 T 19-04-2016 ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 PRINTS PR00145 Argininosuccinate lyase family signature 159 179 1.1E-67 T 19-04-2016 ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 PRINTS PR00145 Argininosuccinate lyase family signature 118 140 1.1E-67 T 19-04-2016 ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 PRINTS PR00145 Argininosuccinate lyase family signature 327 346 1.1E-67 T 19-04-2016 ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 Gene3D G3DSA:1.10.40.30 403 459 8.9E-29 T 19-04-2016 ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 PRINTS PR00149 Fumarate lyase superfamily signature 119 137 1.3E-27 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 PRINTS PR00149 Fumarate lyase superfamily signature 292 308 1.3E-27 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 PRINTS PR00149 Fumarate lyase superfamily signature 164 182 1.3E-27 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 PRINTS PR00149 Fumarate lyase superfamily signature 248 275 1.3E-27 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 Gene3D G3DSA:1.10.275.10 19 123 3.7E-37 T 19-04-2016 IPR024083 Fumarase/histidase, N-terminal ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 Pfam PF14698 Argininosuccinate lyase C-terminal 392 458 6.7E-23 T 19-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 PANTHER PTHR11444 21 484 5.6E-217 T 19-04-2016 IPR000362 Fumarate lyase family ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 Pfam PF00206 Lyase 26 317 5.2E-73 T 19-04-2016 IPR022761 Fumarate lyase, N-terminal ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 PANTHER PTHR11444:SF3 21 484 5.6E-217 T 19-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 TIGRFAM TIGR00838 argH: argininosuccinate lyase 21 484 9.6E-181 T 19-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 SUPERFAMILY SSF48557 21 484 8.01E-143 T 19-04-2016 IPR008948 L-Aspartase-like GO:0003824 ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 ProSitePatterns PS00163 Fumarate lyases signature. 292 301 - T 19-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 Gene3D G3DSA:1.20.200.10 124 402 3.4E-106 T 19-04-2016 ALIDE2_RS06105 ac6c54721dcba48d1a69ca8d5d63fc54 486 Hamap MF_00006 Argininosuccinate lyase [argH]. 19 482 42.559 T 19-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS21780 a823fcd0623cc494f088aa5adcd0c37d 499 SUPERFAMILY SSF56322 15 492 8.63E-150 T 19-04-2016 IPR005801 ADC synthase GO:0009058 ALIDE2_RS21780 a823fcd0623cc494f088aa5adcd0c37d 499 Gene3D G3DSA:3.60.120.10 14 496 1.1E-171 T 19-04-2016 IPR005801 ADC synthase GO:0009058 ALIDE2_RS21780 a823fcd0623cc494f088aa5adcd0c37d 499 PANTHER PTHR11236:SF9 6 496 9.1E-211 T 19-04-2016 ALIDE2_RS21780 a823fcd0623cc494f088aa5adcd0c37d 499 PRINTS PR00095 Anthranilate synthase component I signature 440 454 4.3E-24 T 19-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 ALIDE2_RS21780 a823fcd0623cc494f088aa5adcd0c37d 499 PRINTS PR00095 Anthranilate synthase component I signature 331 344 4.3E-24 T 19-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 ALIDE2_RS21780 a823fcd0623cc494f088aa5adcd0c37d 499 PRINTS PR00095 Anthranilate synthase component I signature 345 358 4.3E-24 T 19-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 ALIDE2_RS21780 a823fcd0623cc494f088aa5adcd0c37d 499 PRINTS PR00095 Anthranilate synthase component I signature 425 439 4.3E-24 T 19-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 ALIDE2_RS21780 a823fcd0623cc494f088aa5adcd0c37d 499 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 177 2.8E-31 T 19-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 ALIDE2_RS21780 a823fcd0623cc494f088aa5adcd0c37d 499 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 491 6.2E-162 T 19-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 ALIDE2_RS21780 a823fcd0623cc494f088aa5adcd0c37d 499 Pfam PF00425 chorismate binding enzyme 226 483 1.2E-93 T 19-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal ALIDE2_RS21780 a823fcd0623cc494f088aa5adcd0c37d 499 PANTHER PTHR11236 6 496 9.1E-211 T 19-04-2016 ALIDE2_RS04565 a062a5531da04207282fba5287b8f824 139 PANTHER PTHR35303:SF1 1 123 4.8E-44 T 19-04-2016 ALIDE2_RS04565 a062a5531da04207282fba5287b8f824 139 Pfam PF06155 Protein of unknown function (DUF971) 14 98 4.2E-29 T 19-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 ALIDE2_RS04565 a062a5531da04207282fba5287b8f824 139 PANTHER PTHR35303 1 123 4.8E-44 T 19-04-2016 ALIDE2_RS03640 39848153ca5c8b9fb058bea1ab02f81a 502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 154 165 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS03640 39848153ca5c8b9fb058bea1ab02f81a 502 Gene3D G3DSA:3.40.50.980 161 311 2.7E-30 T 19-04-2016 ALIDE2_RS03640 39848153ca5c8b9fb058bea1ab02f81a 502 Gene3D G3DSA:3.30.300.30 404 501 4.6E-29 T 19-04-2016 ALIDE2_RS03640 39848153ca5c8b9fb058bea1ab02f81a 502 Pfam PF13193 AMP-binding enzyme C-terminal domain 418 492 7.3E-18 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS03640 39848153ca5c8b9fb058bea1ab02f81a 502 Pfam PF00501 AMP-binding enzyme 8 409 4.7E-89 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS03640 39848153ca5c8b9fb058bea1ab02f81a 502 Gene3D G3DSA:2.30.38.10 328 399 1.7E-25 T 19-04-2016 ALIDE2_RS03640 39848153ca5c8b9fb058bea1ab02f81a 502 Gene3D G3DSA:3.40.50.980 2 160 2.2E-34 T 19-04-2016 ALIDE2_RS03640 39848153ca5c8b9fb058bea1ab02f81a 502 PANTHER PTHR24096 1 499 5.6E-128 T 19-04-2016 ALIDE2_RS03640 39848153ca5c8b9fb058bea1ab02f81a 502 SUPERFAMILY SSF56801 3 501 1.57E-131 T 19-04-2016 ALIDE2_RS11170 d0c7e60157eff5112c461cb3a4b29487 177 PANTHER PTHR26402:SF344 5 117 5.1E-53 T 19-04-2016 ALIDE2_RS11170 d0c7e60157eff5112c461cb3a4b29487 177 PANTHER PTHR26402 5 117 5.1E-53 T 19-04-2016 ALIDE2_RS11170 d0c7e60157eff5112c461cb3a4b29487 177 SUPERFAMILY SSF52172 7 117 1.21E-23 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS11170 d0c7e60157eff5112c461cb3a4b29487 177 SMART SM00448 5 117 2.3E-18 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS11170 d0c7e60157eff5112c461cb3a4b29487 177 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 158 177 1.4E-8 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS11170 d0c7e60157eff5112c461cb3a4b29487 177 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 141 158 1.4E-8 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS11170 d0c7e60157eff5112c461cb3a4b29487 177 Pfam PF00072 Response regulator receiver domain 8 116 7.7E-19 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS11170 d0c7e60157eff5112c461cb3a4b29487 177 Pfam PF02954 Bacterial regulatory protein, Fis family 136 174 5.5E-13 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS11170 d0c7e60157eff5112c461cb3a4b29487 177 Gene3D G3DSA:1.10.10.60 121 176 1.6E-22 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS11170 d0c7e60157eff5112c461cb3a4b29487 177 Gene3D G3DSA:3.40.50.2300 7 116 2.1E-23 T 19-04-2016 ALIDE2_RS11170 d0c7e60157eff5112c461cb3a4b29487 177 SUPERFAMILY SSF46689 133 174 2.26E-13 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS02350 2ba1ffd6d663193e984ec7e0f9719cf4 225 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 19-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ALIDE2_RS02350 2ba1ffd6d663193e984ec7e0f9719cf4 225 PANTHER PTHR11002 2 207 1.1E-59 T 19-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ALIDE2_RS02350 2ba1ffd6d663193e984ec7e0f9719cf4 225 SMART SM00947 30 192 1.5E-61 T 19-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ALIDE2_RS02350 2ba1ffd6d663193e984ec7e0f9719cf4 225 Pfam PF00484 Carbonic anhydrase 37 188 3.7E-49 T 19-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ALIDE2_RS02350 2ba1ffd6d663193e984ec7e0f9719cf4 225 Gene3D G3DSA:3.40.1050.10 4 200 7.7E-67 T 19-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ALIDE2_RS02350 2ba1ffd6d663193e984ec7e0f9719cf4 225 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 87 107 - T 19-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ALIDE2_RS02350 2ba1ffd6d663193e984ec7e0f9719cf4 225 SUPERFAMILY SSF53056 4 201 9.29E-58 T 19-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ALIDE2_RS16880 2cfb19516a31f3f0167739dbc48e8cbd 117 Pfam PF13663 Domain of unknown function (DUF4148) 1 78 1.8E-15 T 19-04-2016 IPR025421 Protein of unknown function DUF4148 ALIDE2_RS18715 943f53a87c61e3f2b0e0ffd71405ea2d 299 PANTHER PTHR11364 1 299 5.0E-80 T 19-04-2016 ALIDE2_RS18715 943f53a87c61e3f2b0e0ffd71405ea2d 299 Pfam PF00581 Rhodanese-like domain 9 147 1.9E-13 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS18715 943f53a87c61e3f2b0e0ffd71405ea2d 299 Pfam PF00581 Rhodanese-like domain 177 290 4.6E-5 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS18715 943f53a87c61e3f2b0e0ffd71405ea2d 299 SMART SM00450 174 294 4.1E-5 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS18715 943f53a87c61e3f2b0e0ffd71405ea2d 299 SMART SM00450 8 150 3.3E-13 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS18715 943f53a87c61e3f2b0e0ffd71405ea2d 299 Gene3D G3DSA:3.40.250.10 1 164 1.1E-47 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS18715 943f53a87c61e3f2b0e0ffd71405ea2d 299 Gene3D G3DSA:3.40.250.10 165 299 8.9E-32 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS18715 943f53a87c61e3f2b0e0ffd71405ea2d 299 PANTHER PTHR11364:SF0 1 299 5.0E-80 T 19-04-2016 ALIDE2_RS18715 943f53a87c61e3f2b0e0ffd71405ea2d 299 SUPERFAMILY SSF52821 177 299 1.44E-29 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS18715 943f53a87c61e3f2b0e0ffd71405ea2d 299 SUPERFAMILY SSF52821 2 157 1.44E-31 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS18720 f91f104b5882f1ab5b5467c635b0a9da 478 Pfam PF00171 Aldehyde dehydrogenase family 14 473 1.2E-159 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS18720 f91f104b5882f1ab5b5467c635b0a9da 478 SUPERFAMILY SSF53720 4 475 1.44E-161 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS18720 f91f104b5882f1ab5b5467c635b0a9da 478 PANTHER PTHR11699 4 475 2.8E-206 T 19-04-2016 ALIDE2_RS18720 f91f104b5882f1ab5b5467c635b0a9da 478 Gene3D G3DSA:3.40.605.10 5 262 6.2E-92 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS18720 f91f104b5882f1ab5b5467c635b0a9da 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS18720 f91f104b5882f1ab5b5467c635b0a9da 478 Gene3D G3DSA:3.40.309.10 263 448 4.6E-64 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS21540 27b80da7a6be92ef3d8c0a312e115b80 243 Pfam PF00589 Phage integrase family 108 241 3.6E-26 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS21540 27b80da7a6be92ef3d8c0a312e115b80 243 Gene3D G3DSA:1.10.443.10 108 240 1.3E-28 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS21540 27b80da7a6be92ef3d8c0a312e115b80 243 PANTHER PTHR30349 1 240 1.5E-47 T 19-04-2016 ALIDE2_RS21540 27b80da7a6be92ef3d8c0a312e115b80 243 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 11 84 1.1E-14 T 19-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ALIDE2_RS21540 27b80da7a6be92ef3d8c0a312e115b80 243 SUPERFAMILY SSF56349 13 241 3.83E-39 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS21540 27b80da7a6be92ef3d8c0a312e115b80 243 Gene3D G3DSA:1.10.150.130 16 84 6.5E-6 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS21540 27b80da7a6be92ef3d8c0a312e115b80 243 PANTHER PTHR30349:SF5 1 240 1.5E-47 T 19-04-2016 ALIDE2_RS23310 54d61f271e734fc3d402bd6ccf70eea8 418 PANTHER PTHR32494:SF6 1 418 1.2E-200 T 19-04-2016 ALIDE2_RS23310 54d61f271e734fc3d402bd6ccf70eea8 418 PIRSF PIRSF001235 10 418 1.3E-139 T 19-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 ALIDE2_RS23310 54d61f271e734fc3d402bd6ccf70eea8 418 Gene3D G3DSA:3.30.70.360 231 333 1.5E-43 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS23310 54d61f271e734fc3d402bd6ccf70eea8 418 PANTHER PTHR32494 1 418 1.2E-200 T 19-04-2016 ALIDE2_RS23310 54d61f271e734fc3d402bd6ccf70eea8 418 SUPERFAMILY SSF55031 218 333 2.36E-32 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS23310 54d61f271e734fc3d402bd6ccf70eea8 418 Gene3D G3DSA:3.40.630.10 10 230 1.7E-117 T 19-04-2016 ALIDE2_RS23310 54d61f271e734fc3d402bd6ccf70eea8 418 Gene3D G3DSA:3.40.630.10 356 415 1.7E-117 T 19-04-2016 ALIDE2_RS23310 54d61f271e734fc3d402bd6ccf70eea8 418 Pfam PF01546 Peptidase family M20/M25/M40 86 411 4.8E-38 T 19-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 ALIDE2_RS23310 54d61f271e734fc3d402bd6ccf70eea8 418 SUPERFAMILY SSF53187 341 413 9.43E-95 T 19-04-2016 ALIDE2_RS23310 54d61f271e734fc3d402bd6ccf70eea8 418 SUPERFAMILY SSF53187 2 228 9.43E-95 T 19-04-2016 ALIDE2_RS23310 54d61f271e734fc3d402bd6ccf70eea8 418 Pfam PF07687 Peptidase dimerisation domain 218 317 3.6E-6 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS23310 54d61f271e734fc3d402bd6ccf70eea8 418 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 17 411 3.5E-134 T 19-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 ALIDE2_RS13185 a05945e5d6ba1ddca24576ff87171511 253 SUPERFAMILY SSF52540 4 227 1.94E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13185 a05945e5d6ba1ddca24576ff87171511 253 Gene3D G3DSA:3.40.50.300 2 229 8.7E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13185 a05945e5d6ba1ddca24576ff87171511 253 PANTHER PTHR24220 6 239 2.6E-89 T 19-04-2016 ALIDE2_RS13185 a05945e5d6ba1ddca24576ff87171511 253 PANTHER PTHR24220:SF582 6 239 2.6E-89 T 19-04-2016 ALIDE2_RS13185 a05945e5d6ba1ddca24576ff87171511 253 SMART SM00382 29 217 4.3E-16 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS13185 a05945e5d6ba1ddca24576ff87171511 253 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS13185 a05945e5d6ba1ddca24576ff87171511 253 Pfam PF00005 ABC transporter 22 169 8.7E-28 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS18990 073be6144157bbd8150f6bd172c158e3 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS18990 073be6144157bbd8150f6bd172c158e3 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.9E-80 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS18990 073be6144157bbd8150f6bd172c158e3 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 4.3E-39 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS18990 073be6144157bbd8150f6bd172c158e3 449 SMART SM00878 336 441 9.5E-66 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS18990 073be6144157bbd8150f6bd172c158e3 449 Gene3D G3DSA:3.30.470.20 204 443 3.2E-99 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS18990 073be6144157bbd8150f6bd172c158e3 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS18990 073be6144157bbd8150f6bd172c158e3 449 Gene3D G3DSA:3.30.1490.20 130 203 2.4E-29 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS18990 073be6144157bbd8150f6bd172c158e3 449 SUPERFAMILY SSF52440 1 113 4.89E-47 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS18990 073be6144157bbd8150f6bd172c158e3 449 SUPERFAMILY SSF51246 331 445 9.42E-44 T 19-04-2016 IPR011054 Rudiment single hybrid motif ALIDE2_RS18990 073be6144157bbd8150f6bd172c158e3 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 2.4E-224 T 19-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 ALIDE2_RS18990 073be6144157bbd8150f6bd172c158e3 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.0E-44 T 19-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain ALIDE2_RS18990 073be6144157bbd8150f6bd172c158e3 449 PANTHER PTHR18866 1 447 8.5E-292 T 19-04-2016 ALIDE2_RS18990 073be6144157bbd8150f6bd172c158e3 449 SUPERFAMILY SSF56059 83 349 1.85E-71 T 19-04-2016 ALIDE2_RS18990 073be6144157bbd8150f6bd172c158e3 449 Gene3D G3DSA:3.40.50.20 1 129 6.6E-52 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS06260 f1d512af1ee30b922048b207c8741ebf 346 PANTHER PTHR30341:SF1 21 339 1.2E-89 T 19-04-2016 ALIDE2_RS06260 f1d512af1ee30b922048b207c8741ebf 346 Gene3D G3DSA:3.90.226.10 237 323 1.2E-45 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS06260 f1d512af1ee30b922048b207c8741ebf 346 Gene3D G3DSA:3.90.226.10 74 199 1.2E-45 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS06260 f1d512af1ee30b922048b207c8741ebf 346 PANTHER PTHR30341 21 339 1.2E-89 T 19-04-2016 ALIDE2_RS06260 f1d512af1ee30b922048b207c8741ebf 346 SUPERFAMILY SSF52096 236 297 9.59E-44 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS06260 f1d512af1ee30b922048b207c8741ebf 346 SUPERFAMILY SSF52096 74 207 9.59E-44 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS06260 f1d512af1ee30b922048b207c8741ebf 346 Pfam PF01343 Peptidase family S49 161 309 3.8E-37 T 19-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 ALIDE2_RS04275 f9c53804c96098c874a87dbf76522946 199 PANTHER PTHR10134:SF8 21 198 4.0E-75 T 19-04-2016 ALIDE2_RS04275 f9c53804c96098c874a87dbf76522946 199 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 194 1.6E-63 T 19-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 ALIDE2_RS04275 f9c53804c96098c874a87dbf76522946 199 PRINTS PR00162 Rieske 2Fe-2S subunit signature 121 132 1.8E-7 T 19-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ALIDE2_RS04275 f9c53804c96098c874a87dbf76522946 199 PRINTS PR00162 Rieske 2Fe-2S subunit signature 166 178 1.8E-7 T 19-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ALIDE2_RS04275 f9c53804c96098c874a87dbf76522946 199 PRINTS PR00162 Rieske 2Fe-2S subunit signature 153 165 1.8E-7 T 19-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ALIDE2_RS04275 f9c53804c96098c874a87dbf76522946 199 Pfam PF00355 Rieske [2Fe-2S] domain 58 181 2.1E-11 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ALIDE2_RS04275 f9c53804c96098c874a87dbf76522946 199 SUPERFAMILY SSF50022 29 193 8.64E-40 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ALIDE2_RS04275 f9c53804c96098c874a87dbf76522946 199 PANTHER PTHR10134 21 198 4.0E-75 T 19-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 ALIDE2_RS04275 f9c53804c96098c874a87dbf76522946 199 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 3 39 3.2E-6 T 19-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 ALIDE2_RS04275 f9c53804c96098c874a87dbf76522946 199 Gene3D G3DSA:2.102.10.10 7 195 4.3E-38 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ALIDE2_RS15005 908785d0efd93e5a1245501263e5d882 1182 Pfam PF14579 Helix-hairpin-helix motif 811 909 1.1E-23 T 19-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS15005 908785d0efd93e5a1245501263e5d882 1182 PANTHER PTHR32294:SF0 487 1180 0.0 T 19-04-2016 ALIDE2_RS15005 908785d0efd93e5a1245501263e5d882 1182 PANTHER PTHR32294:SF0 1 471 0.0 T 19-04-2016 ALIDE2_RS15005 908785d0efd93e5a1245501263e5d882 1182 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 287 736 5.0E-170 T 19-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS15005 908785d0efd93e5a1245501263e5d882 1182 PANTHER PTHR32294 487 1180 0.0 T 19-04-2016 ALIDE2_RS15005 908785d0efd93e5a1245501263e5d882 1182 PANTHER PTHR32294 1 471 0.0 T 19-04-2016 ALIDE2_RS15005 908785d0efd93e5a1245501263e5d882 1182 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 2 1037 0.0 T 19-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS15005 908785d0efd93e5a1245501263e5d882 1182 SMART SM00481 3 70 2.1E-21 T 19-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 ALIDE2_RS15005 908785d0efd93e5a1245501263e5d882 1182 Gene3D G3DSA:2.40.50.140 988 1083 1.1E-5 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS15005 908785d0efd93e5a1245501263e5d882 1182 Pfam PF02811 PHP domain 4 168 1.0E-40 T 19-04-2016 IPR004013 PHP domain GO:0003824 ALIDE2_RS15005 908785d0efd93e5a1245501263e5d882 1182 Gene3D G3DSA:3.20.20.140 1 251 2.5E-22 T 19-04-2016 ALIDE2_RS15005 908785d0efd93e5a1245501263e5d882 1182 SUPERFAMILY SSF89550 1 258 2.75E-12 T 19-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 ALIDE2_RS09560 c5fd3388fc35b21a10e269f8a2f29ad0 125 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 25 125 6.6E-46 T 19-04-2016 IPR021356 Integrating conjugative element protein PFL4702 ALIDE2_RS09560 c5fd3388fc35b21a10e269f8a2f29ad0 125 Pfam PF11190 Protein of unknown function (DUF2976) 38 124 1.3E-32 T 19-04-2016 IPR021356 Integrating conjugative element protein PFL4702 ALIDE2_RS12010 d41871d91f5a26fb3fa51340aee5087d 348 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 6 345 2.4E-120 T 19-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS12010 d41871d91f5a26fb3fa51340aee5087d 348 Pfam PF01180 Dihydroorotate dehydrogenase 50 345 5.1E-87 T 19-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 ALIDE2_RS12010 d41871d91f5a26fb3fa51340aee5087d 348 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 83 102 - T 19-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 ALIDE2_RS12010 d41871d91f5a26fb3fa51340aee5087d 348 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 5 344 48.331 T 19-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS12010 d41871d91f5a26fb3fa51340aee5087d 348 SUPERFAMILY SSF51395 4 345 4.66E-101 T 19-04-2016 ALIDE2_RS12010 d41871d91f5a26fb3fa51340aee5087d 348 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 300 320 - T 19-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 ALIDE2_RS12010 d41871d91f5a26fb3fa51340aee5087d 348 PANTHER PTHR11938 8 346 1.6E-85 T 19-04-2016 ALIDE2_RS12010 d41871d91f5a26fb3fa51340aee5087d 348 Gene3D G3DSA:3.20.20.70 5 346 2.0E-128 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS12010 d41871d91f5a26fb3fa51340aee5087d 348 PIRSF PIRSF000164 16 348 6.7E-95 T 19-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 ALIDE2_RS16090 627108bb7fa79564e351f4ea70e1a94c 300 SUPERFAMILY SSF53850 13 26 2.12E-52 T 19-04-2016 ALIDE2_RS16090 627108bb7fa79564e351f4ea70e1a94c 300 SUPERFAMILY SSF53850 53 280 2.12E-52 T 19-04-2016 ALIDE2_RS16090 627108bb7fa79564e351f4ea70e1a94c 300 Gene3D G3DSA:3.40.190.10 60 144 1.1E-22 T 19-04-2016 ALIDE2_RS16090 627108bb7fa79564e351f4ea70e1a94c 300 Gene3D G3DSA:3.40.190.10 247 280 1.1E-22 T 19-04-2016 ALIDE2_RS16090 627108bb7fa79564e351f4ea70e1a94c 300 PANTHER PTHR18966:SF191 59 279 4.5E-27 T 19-04-2016 ALIDE2_RS16090 627108bb7fa79564e351f4ea70e1a94c 300 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 65 279 9.2E-44 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS16090 627108bb7fa79564e351f4ea70e1a94c 300 PANTHER PTHR18966 59 279 4.5E-27 T 19-04-2016 ALIDE2_RS16090 627108bb7fa79564e351f4ea70e1a94c 300 Gene3D G3DSA:3.40.190.10 145 246 8.8E-29 T 19-04-2016 ALIDE2_RS16090 627108bb7fa79564e351f4ea70e1a94c 300 SMART SM00062 63 292 4.6E-50 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS10985 dab2e461aefb8c86edd72a9daebf4081 290 Pfam PF13356 Domain of unknown function (DUF4102) 2 89 1.5E-15 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 ALIDE2_RS10985 dab2e461aefb8c86edd72a9daebf4081 290 Pfam PF00589 Phage integrase family 205 280 2.6E-9 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS10985 dab2e461aefb8c86edd72a9daebf4081 290 Gene3D G3DSA:1.10.150.130 99 192 4.9E-16 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS10985 dab2e461aefb8c86edd72a9daebf4081 290 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 99 150 2.7E-6 T 19-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ALIDE2_RS10985 dab2e461aefb8c86edd72a9daebf4081 290 PANTHER PTHR30629 1 281 1.2E-56 T 19-04-2016 ALIDE2_RS10985 dab2e461aefb8c86edd72a9daebf4081 290 Gene3D G3DSA:1.10.443.10 202 281 2.8E-10 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS10985 dab2e461aefb8c86edd72a9daebf4081 290 PANTHER PTHR30629:SF2 1 281 1.2E-56 T 19-04-2016 ALIDE2_RS10985 dab2e461aefb8c86edd72a9daebf4081 290 SUPERFAMILY SSF56349 99 281 8.75E-36 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS09180 f93875315f98fa54cdf50637233c434c 388 SUPERFAMILY SSF53901 10 228 2.19E-23 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS09180 f93875315f98fa54cdf50637233c434c 388 Gene3D G3DSA:3.40.47.10 241 354 9.0E-10 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS09180 f93875315f98fa54cdf50637233c434c 388 Gene3D G3DSA:3.40.47.10 142 182 9.0E-10 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS09180 f93875315f98fa54cdf50637233c434c 388 PANTHER PTHR18919:SF108 2 386 1.6E-139 T 19-04-2016 ALIDE2_RS09180 f93875315f98fa54cdf50637233c434c 388 Gene3D G3DSA:3.40.47.10 197 222 1.5E-16 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS09180 f93875315f98fa54cdf50637233c434c 388 Gene3D G3DSA:3.40.47.10 20 113 1.5E-16 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS09180 f93875315f98fa54cdf50637233c434c 388 PIRSF PIRSF000429 2 379 1.2E-28 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS09180 f93875315f98fa54cdf50637233c434c 388 SUPERFAMILY SSF53901 230 371 4.05E-21 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS09180 f93875315f98fa54cdf50637233c434c 388 PANTHER PTHR18919 2 386 1.6E-139 T 19-04-2016 ALIDE2_RS19985 469fa1a46dd7f8ff3f001df0b7b6f062 426 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 23 423 1.1E-146 T 19-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 ALIDE2_RS19985 469fa1a46dd7f8ff3f001df0b7b6f062 426 Gene3D G3DSA:3.20.20.140 73 373 8.6E-103 T 19-04-2016 ALIDE2_RS19985 469fa1a46dd7f8ff3f001df0b7b6f062 426 SUPERFAMILY SSF51338 10 83 8.02E-9 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ALIDE2_RS19985 469fa1a46dd7f8ff3f001df0b7b6f062 426 PANTHER PTHR11271:SF6 53 423 1.4E-120 T 19-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 ALIDE2_RS19985 469fa1a46dd7f8ff3f001df0b7b6f062 426 Pfam PF01979 Amidohydrolase family 65 424 5.3E-51 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 ALIDE2_RS19985 469fa1a46dd7f8ff3f001df0b7b6f062 426 Gene3D G3DSA:2.30.40.10 17 72 2.3E-5 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ALIDE2_RS19985 469fa1a46dd7f8ff3f001df0b7b6f062 426 SUPERFAMILY SSF51556 67 373 2.88E-92 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS19985 469fa1a46dd7f8ff3f001df0b7b6f062 426 PANTHER PTHR11271 53 423 1.4E-120 T 19-04-2016 ALIDE2_RS19985 469fa1a46dd7f8ff3f001df0b7b6f062 426 SUPERFAMILY SSF51338 351 423 2.29E-8 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ALIDE2_RS11355 8cfe535d1630515915cdcbf0a2cefeb6 276 Gene3D G3DSA:2.60.40.1590 25 121 2.9E-32 T 19-04-2016 ALIDE2_RS11355 8cfe535d1630515915cdcbf0a2cefeb6 276 PANTHER PTHR21666 94 276 1.8E-35 T 19-04-2016 ALIDE2_RS11355 8cfe535d1630515915cdcbf0a2cefeb6 276 SUPERFAMILY SSF51261 98 274 3.82E-45 T 19-04-2016 IPR011055 Duplicated hybrid motif ALIDE2_RS11355 8cfe535d1630515915cdcbf0a2cefeb6 276 Gene3D G3DSA:2.70.70.10 127 275 1.7E-42 T 19-04-2016 ALIDE2_RS11355 8cfe535d1630515915cdcbf0a2cefeb6 276 Pfam PF01551 Peptidase family M23 176 270 1.0E-25 T 19-04-2016 IPR016047 Peptidase M23 ALIDE2_RS21970 2daa1dc6a5a1aca81bb7d2425332e72c 517 Pfam PF04552 Sigma-54, DNA binding domain 359 515 3.4E-64 T 19-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding ALIDE2_RS21970 2daa1dc6a5a1aca81bb7d2425332e72c 517 PANTHER PTHR32248 1 65 1.4E-135 T 19-04-2016 ALIDE2_RS21970 2daa1dc6a5a1aca81bb7d2425332e72c 517 PANTHER PTHR32248 86 517 1.4E-135 T 19-04-2016 ALIDE2_RS21970 2daa1dc6a5a1aca81bb7d2425332e72c 517 Pfam PF04963 Sigma-54 factor, core binding domain 139 344 3.6E-52 T 19-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 ALIDE2_RS21970 2daa1dc6a5a1aca81bb7d2425332e72c 517 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 3.5E-18 T 19-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS21970 2daa1dc6a5a1aca81bb7d2425332e72c 517 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 496 503 - T 19-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS21970 2daa1dc6a5a1aca81bb7d2425332e72c 517 PRINTS PR00045 Sigma-54 factor signature 491 509 2.3E-29 T 19-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS21970 2daa1dc6a5a1aca81bb7d2425332e72c 517 PRINTS PR00045 Sigma-54 factor signature 433 444 2.3E-29 T 19-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS21970 2daa1dc6a5a1aca81bb7d2425332e72c 517 PRINTS PR00045 Sigma-54 factor signature 219 236 2.3E-29 T 19-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS21970 2daa1dc6a5a1aca81bb7d2425332e72c 517 PRINTS PR00045 Sigma-54 factor signature 417 429 2.3E-29 T 19-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS21970 2daa1dc6a5a1aca81bb7d2425332e72c 517 PANTHER PTHR32248:SF4 1 65 1.4E-135 T 19-04-2016 ALIDE2_RS21970 2daa1dc6a5a1aca81bb7d2425332e72c 517 PANTHER PTHR32248:SF4 86 517 1.4E-135 T 19-04-2016 ALIDE2_RS21970 2daa1dc6a5a1aca81bb7d2425332e72c 517 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 405 424 - T 19-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS21970 2daa1dc6a5a1aca81bb7d2425332e72c 517 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 515 2.0E-129 T 19-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS21970 2daa1dc6a5a1aca81bb7d2425332e72c 517 PIRSF PIRSF000774 1 517 3.1E-150 T 19-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS03280 00e3792136811d868df7fd97927f1fbb 275 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 5 273 4.7E-94 T 19-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 ALIDE2_RS03280 00e3792136811d868df7fd97927f1fbb 275 Pfam PF02219 Methylenetetrahydrofolate reductase 5 274 6.3E-83 T 19-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 ALIDE2_RS03280 00e3792136811d868df7fd97927f1fbb 275 SUPERFAMILY SSF51730 4 274 1.1E-92 T 19-04-2016 IPR029041 FAD-linked oxidoreductase-like ALIDE2_RS03280 00e3792136811d868df7fd97927f1fbb 275 PANTHER PTHR21091:SF31 132 267 8.5E-35 T 19-04-2016 ALIDE2_RS03280 00e3792136811d868df7fd97927f1fbb 275 Gene3D G3DSA:3.20.20.220 4 274 2.7E-101 T 19-04-2016 IPR029041 FAD-linked oxidoreductase-like ALIDE2_RS03280 00e3792136811d868df7fd97927f1fbb 275 PANTHER PTHR21091 132 267 8.5E-35 T 19-04-2016 ALIDE2_RS20070 9460a33a6c2ee846f47a7e930cc61392 572 Gene3D G3DSA:3.40.50.980 192 224 5.0E-25 T 19-04-2016 ALIDE2_RS20070 9460a33a6c2ee846f47a7e930cc61392 572 Gene3D G3DSA:3.40.50.980 28 153 5.0E-25 T 19-04-2016 ALIDE2_RS20070 9460a33a6c2ee846f47a7e930cc61392 572 Pfam PF13193 AMP-binding enzyme C-terminal domain 475 545 6.7E-8 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS20070 9460a33a6c2ee846f47a7e930cc61392 572 PANTHER PTHR24096 29 119 1.6E-78 T 19-04-2016 ALIDE2_RS20070 9460a33a6c2ee846f47a7e930cc61392 572 PANTHER PTHR24096 140 543 1.6E-78 T 19-04-2016 ALIDE2_RS20070 9460a33a6c2ee846f47a7e930cc61392 572 Gene3D G3DSA:2.30.38.10 392 455 8.7E-19 T 19-04-2016 ALIDE2_RS20070 9460a33a6c2ee846f47a7e930cc61392 572 Gene3D G3DSA:3.40.50.980 225 373 2.1E-17 T 19-04-2016 ALIDE2_RS20070 9460a33a6c2ee846f47a7e930cc61392 572 Pfam PF00501 AMP-binding enzyme 28 466 5.6E-61 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS20070 9460a33a6c2ee846f47a7e930cc61392 572 Gene3D G3DSA:3.30.300.30 462 568 5.6E-21 T 19-04-2016 ALIDE2_RS20070 9460a33a6c2ee846f47a7e930cc61392 572 SUPERFAMILY SSF56801 187 565 5.63E-100 T 19-04-2016 ALIDE2_RS20070 9460a33a6c2ee846f47a7e930cc61392 572 SUPERFAMILY SSF56801 25 139 5.63E-100 T 19-04-2016 ALIDE2_RS05325 283742f896018194599d7873796d1548 426 Gene3D G3DSA:3.30.499.10 291 425 1.3E-44 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05325 283742f896018194599d7873796d1548 426 Gene3D G3DSA:3.30.499.10 3 148 6.6E-25 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05325 283742f896018194599d7873796d1548 426 SUPERFAMILY SSF53732 3 425 6.67E-121 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05325 283742f896018194599d7873796d1548 426 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 5 422 2.6E-127 T 19-04-2016 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05325 283742f896018194599d7873796d1548 426 PANTHER PTHR11670 5 425 7.8E-117 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05325 283742f896018194599d7873796d1548 426 Gene3D G3DSA:3.40.1060.10 149 290 1.1E-35 T 19-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05325 283742f896018194599d7873796d1548 426 PRINTS PR00415 Aconitase family signature 300 311 7.8E-23 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05325 283742f896018194599d7873796d1548 426 PRINTS PR00415 Aconitase family signature 203 216 7.8E-23 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05325 283742f896018194599d7873796d1548 426 PRINTS PR00415 Aconitase family signature 127 142 7.8E-23 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05325 283742f896018194599d7873796d1548 426 PRINTS PR00415 Aconitase family signature 357 370 7.8E-23 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05325 283742f896018194599d7873796d1548 426 PRINTS PR00415 Aconitase family signature 189 202 7.8E-23 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05325 283742f896018194599d7873796d1548 426 PRINTS PR00415 Aconitase family signature 113 126 7.8E-23 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05325 283742f896018194599d7873796d1548 426 PRINTS PR00415 Aconitase family signature 102 110 7.8E-23 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05325 283742f896018194599d7873796d1548 426 Pfam PF00330 Aconitase family (aconitate hydratase) 30 416 2.8E-79 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS07095 50fe74aa1c34f780cc3c5750097be825 174 Pfam PF00156 Phosphoribosyl transferase domain 12 158 4.2E-24 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 ALIDE2_RS07095 50fe74aa1c34f780cc3c5750097be825 174 Gene3D G3DSA:3.40.50.2020 7 163 4.2E-35 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS07095 50fe74aa1c34f780cc3c5750097be825 174 SUPERFAMILY SSF53271 5 168 5.11E-32 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 Gene3D G3DSA:3.40.1060.10 156 293 1.6E-40 T 19-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 19-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 473 59.97 T 19-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 Pfam PF00330 Aconitase family (aconitate hydratase) 7 464 4.6E-153 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 472 5.1E-237 T 19-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 PANTHER PTHR11670 1 311 1.5E-289 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 PANTHER PTHR11670 331 472 1.5E-289 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 Gene3D G3DSA:3.30.499.10 339 472 4.2E-62 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 ProSitePatterns PS00450 Aconitase family signature 1. 343 359 - T 19-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 Gene3D G3DSA:3.30.499.10 2 155 9.2E-23 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 SUPERFAMILY SSF53732 1 471 5.62E-162 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 PANTHER PTHR11670:SF38 1 311 1.5E-289 T 19-04-2016 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 PANTHER PTHR11670:SF38 331 472 1.5E-289 T 19-04-2016 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 PRINTS PR00415 Aconitase family signature 123 136 2.7E-45 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 PRINTS PR00415 Aconitase family signature 213 226 2.7E-45 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 PRINTS PR00415 Aconitase family signature 199 212 2.7E-45 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 PRINTS PR00415 Aconitase family signature 137 152 2.7E-45 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 PRINTS PR00415 Aconitase family signature 347 358 2.7E-45 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 PRINTS PR00415 Aconitase family signature 406 419 2.7E-45 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 PRINTS PR00415 Aconitase family signature 290 304 2.7E-45 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06525 dff38caa84a14e58288d03e0b5c7135d 473 PRINTS PR00415 Aconitase family signature 112 120 2.7E-45 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS16025 6a462ea45bf60a53960008c3b98d0a62 182 SUPERFAMILY SSF55068 3 171 1.44E-73 T 19-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 ALIDE2_RS16025 6a462ea45bf60a53960008c3b98d0a62 182 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 164 37.513 T 19-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 ALIDE2_RS16025 6a462ea45bf60a53960008c3b98d0a62 182 Pfam PF01625 Peptide methionine sulfoxide reductase 7 159 7.8E-66 T 19-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 ALIDE2_RS16025 6a462ea45bf60a53960008c3b98d0a62 182 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 7 159 2.4E-60 T 19-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 ALIDE2_RS16025 6a462ea45bf60a53960008c3b98d0a62 182 PANTHER PTHR10173:SF34 4 159 2.3E-77 T 19-04-2016 ALIDE2_RS16025 6a462ea45bf60a53960008c3b98d0a62 182 PANTHER PTHR10173 4 159 2.3E-77 T 19-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 ALIDE2_RS16025 6a462ea45bf60a53960008c3b98d0a62 182 Gene3D G3DSA:3.30.1060.10 3 159 1.6E-73 T 19-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 ALIDE2_RS14500 8d507441b9e50b8345ba14b4b7b9810a 323 PANTHER PTHR30237:SF2 17 311 1.4E-60 T 19-04-2016 ALIDE2_RS14500 8d507441b9e50b8345ba14b4b7b9810a 323 PIRSF PIRSF028757 13 318 6.8E-58 T 19-04-2016 IPR003507 Peptidase family S66 ALIDE2_RS14500 8d507441b9e50b8345ba14b4b7b9810a 323 Gene3D G3DSA:3.40.50.10740 16 165 3.1E-31 T 19-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain ALIDE2_RS14500 8d507441b9e50b8345ba14b4b7b9810a 323 Gene3D G3DSA:3.50.30.60 193 312 3.8E-42 T 19-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain ALIDE2_RS14500 8d507441b9e50b8345ba14b4b7b9810a 323 SUPERFAMILY SSF141986 192 312 4.18E-39 T 19-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain ALIDE2_RS14500 8d507441b9e50b8345ba14b4b7b9810a 323 SUPERFAMILY SSF52317 15 167 4.39E-26 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS14500 8d507441b9e50b8345ba14b4b7b9810a 323 PANTHER PTHR30237 17 311 1.4E-60 T 19-04-2016 ALIDE2_RS14500 8d507441b9e50b8345ba14b4b7b9810a 323 Pfam PF02016 LD-carboxypeptidase 17 308 6.6E-65 T 19-04-2016 IPR003507 Peptidase family S66 ALIDE2_RS08430 30f3f9c4cd5326576deb15ba5ceba78a 308 PANTHER PTHR30346:SF13 2 276 6.3E-64 T 19-04-2016 ALIDE2_RS08430 30f3f9c4cd5326576deb15ba5ceba78a 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 66 4.1E-19 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS08430 30f3f9c4cd5326576deb15ba5ceba78a 308 SUPERFAMILY SSF53850 87 298 1.55E-36 T 19-04-2016 ALIDE2_RS08430 30f3f9c4cd5326576deb15ba5ceba78a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.2E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS08430 30f3f9c4cd5326576deb15ba5ceba78a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.2E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS08430 30f3f9c4cd5326576deb15ba5ceba78a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.2E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS08430 30f3f9c4cd5326576deb15ba5ceba78a 308 SUPERFAMILY SSF46785 4 111 3.18E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08430 30f3f9c4cd5326576deb15ba5ceba78a 308 Pfam PF03466 LysR substrate binding domain 88 293 3.1E-39 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS08430 30f3f9c4cd5326576deb15ba5ceba78a 308 Gene3D G3DSA:1.10.10.10 3 83 6.4E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08430 30f3f9c4cd5326576deb15ba5ceba78a 308 Gene3D G3DSA:3.40.190.10 90 177 2.6E-18 T 19-04-2016 ALIDE2_RS08430 30f3f9c4cd5326576deb15ba5ceba78a 308 PANTHER PTHR30346 2 276 6.3E-64 T 19-04-2016 ALIDE2_RS08430 30f3f9c4cd5326576deb15ba5ceba78a 308 Gene3D G3DSA:3.40.190.10 178 264 6.7E-37 T 19-04-2016 ALIDE2_RS09330 034dd5271339e3aeea799b4a96584187 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 23 269 5.5E-36 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS09330 034dd5271339e3aeea799b4a96584187 272 SUPERFAMILY SSF52096 16 271 1.19E-59 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS09330 034dd5271339e3aeea799b4a96584187 272 Gene3D G3DSA:1.10.12.10 215 271 3.5E-17 T 19-04-2016 IPR014748 Crontonase, C-terminal ALIDE2_RS09330 034dd5271339e3aeea799b4a96584187 272 PANTHER PTHR11941 3 269 8.0E-57 T 19-04-2016 ALIDE2_RS09330 034dd5271339e3aeea799b4a96584187 272 Gene3D G3DSA:3.90.226.10 17 214 4.8E-43 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS08465 bef11961ea413cae3740ec0cdaba8b4c 529 Gene3D G3DSA:1.20.200.10 206 524 3.4E-123 T 19-04-2016 ALIDE2_RS08465 bef11961ea413cae3740ec0cdaba8b4c 529 SUPERFAMILY SSF48557 9 516 3.06E-183 T 19-04-2016 IPR008948 L-Aspartase-like GO:0003824 ALIDE2_RS08465 bef11961ea413cae3740ec0cdaba8b4c 529 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 13 511 1.1E-197 T 19-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 ALIDE2_RS08465 bef11961ea413cae3740ec0cdaba8b4c 529 Gene3D G3DSA:1.10.275.10 10 205 1.9E-71 T 19-04-2016 IPR024083 Fumarase/histidase, N-terminal ALIDE2_RS08465 bef11961ea413cae3740ec0cdaba8b4c 529 PANTHER PTHR10362 11 507 3.4E-221 T 19-04-2016 ALIDE2_RS08465 bef11961ea413cae3740ec0cdaba8b4c 529 Pfam PF00221 Aromatic amino acid lyase 20 462 1.4E-180 T 19-04-2016 IPR001106 Aromatic amino acid lyase ALIDE2_RS08465 bef11961ea413cae3740ec0cdaba8b4c 529 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 147 162 - T 19-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 ALIDE2_RS08465 bef11961ea413cae3740ec0cdaba8b4c 529 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 11 522 42.837 T 19-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 ALIDE2_RS08465 bef11961ea413cae3740ec0cdaba8b4c 529 PANTHER PTHR10362:SF7 11 507 3.4E-221 T 19-04-2016 ALIDE2_RS08040 44b99151fa5c43aa97ac8c8cd85ecd0a 683 PANTHER PTHR33375 30 675 1.7E-79 T 19-04-2016 ALIDE2_RS08040 44b99151fa5c43aa97ac8c8cd85ecd0a 683 SUPERFAMILY SSF110849 27 146 1.26E-13 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS08040 44b99151fa5c43aa97ac8c8cd85ecd0a 683 SUPERFAMILY SSF109709 119 223 1.27E-21 T 19-04-2016 ALIDE2_RS08040 44b99151fa5c43aa97ac8c8cd85ecd0a 683 SMART SM00470 28 125 4.6E-14 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS08040 44b99151fa5c43aa97ac8c8cd85ecd0a 683 PANTHER PTHR33375:SF2 30 675 1.7E-79 T 19-04-2016 ALIDE2_RS08040 44b99151fa5c43aa97ac8c8cd85ecd0a 683 Pfam PF02195 ParB-like nuclease domain 30 124 4.4E-11 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS08040 44b99151fa5c43aa97ac8c8cd85ecd0a 683 Gene3D G3DSA:3.90.1530.10 22 130 1.2E-15 T 19-04-2016 ALIDE2_RS23945 4147e9601ce7fbecc1cd3ca79be2683b 155 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 1 154 4.9E-52 T 19-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 ALIDE2_RS23945 4147e9601ce7fbecc1cd3ca79be2683b 155 Pfam PF02195 ParB-like nuclease domain 2 81 3.0E-21 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS23945 4147e9601ce7fbecc1cd3ca79be2683b 155 PANTHER PTHR33375 1 154 7.8E-69 T 19-04-2016 ALIDE2_RS23945 4147e9601ce7fbecc1cd3ca79be2683b 155 Gene3D G3DSA:3.90.1530.10 1 87 1.3E-32 T 19-04-2016 ALIDE2_RS23945 4147e9601ce7fbecc1cd3ca79be2683b 155 SMART SM00470 1 81 5.6E-21 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS23945 4147e9601ce7fbecc1cd3ca79be2683b 155 SUPERFAMILY SSF109709 74 153 1.44E-28 T 19-04-2016 ALIDE2_RS23945 4147e9601ce7fbecc1cd3ca79be2683b 155 SUPERFAMILY SSF110849 1 83 9.68E-25 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS12175 cffde05b468cf55a06b641055d2b059a 219 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 195 218 2.2E-6 T 19-04-2016 IPR013424 PEP-CTERM protein-sorting domain ALIDE2_RS12175 cffde05b468cf55a06b641055d2b059a 219 Pfam PF07589 PEP-CTERM motif 194 217 3.5E-8 T 19-04-2016 IPR013424 PEP-CTERM protein-sorting domain ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 Pfam PF00344 SecY translocase 74 412 1.2E-116 T 19-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 ProSitePatterns PS00756 Protein secY signature 2. 168 185 - T 19-04-2016 IPR030659 SecY conserved site ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 Hamap MF_01465 Protein translocase subunit SecY [secY]. 8 428 29.738 T 19-04-2016 IPR026593 Protein translocase subunit SecY ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 PANTHER PTHR10906 16 434 1.2E-213 T 19-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 SUPERFAMILY SSF103491 8 419 9.94E-131 T 19-04-2016 IPR023201 SecY subunit domain ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 PIRSF PIRSF004557 2 435 5.0E-123 T 19-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 ProSitePatterns PS00755 Protein secY signature 1. 74 93 - T 19-04-2016 IPR030659 SecY conserved site ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 73 93 8.5E-94 T 19-04-2016 ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 175 198 8.5E-94 T 19-04-2016 ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 8.5E-94 T 19-04-2016 ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 8.5E-94 T 19-04-2016 ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 8.5E-94 T 19-04-2016 ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 114 137 8.5E-94 T 19-04-2016 ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 21 39 8.5E-94 T 19-04-2016 ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 8.5E-94 T 19-04-2016 ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 149 174 8.5E-94 T 19-04-2016 ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 PANTHER PTHR10906:SF2 16 434 1.2E-213 T 19-04-2016 ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 18 424 8.3E-131 T 19-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 ALIDE2_RS21600 c01ee65cb1f8417b58c4b0bbc711c4a2 439 Gene3D G3DSA:1.10.3370.10 8 432 5.0E-167 T 19-04-2016 IPR023201 SecY subunit domain ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 SUPERFAMILY SSF53697 11 527 1.2E-180 T 19-04-2016 ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 Gene3D G3DSA:3.40.50.10490 13 102 9.1E-116 T 19-04-2016 ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 Gene3D G3DSA:3.40.50.10490 295 490 9.1E-116 T 19-04-2016 ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 Gene3D G3DSA:1.10.1390.10 491 528 7.8E-16 T 19-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 Gene3D G3DSA:3.40.50.10490 124 292 4.6E-64 T 19-04-2016 ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 PANTHER PTHR11469 2 527 1.2E-228 T 19-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 481 498 - T 19-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 267 280 - T 19-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 Pfam PF00342 Phosphoglucose isomerase 56 524 8.4E-167 T 19-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 50 508 38.603 T 19-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 PRINTS PR00662 Glucose-6-phosphate isomerase signature 340 361 6.2E-53 T 19-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 PRINTS PR00662 Glucose-6-phosphate isomerase signature 263 281 6.2E-53 T 19-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 PRINTS PR00662 Glucose-6-phosphate isomerase signature 449 467 6.2E-53 T 19-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 PRINTS PR00662 Glucose-6-phosphate isomerase signature 153 172 6.2E-53 T 19-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 PRINTS PR00662 Glucose-6-phosphate isomerase signature 467 481 6.2E-53 T 19-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 ALIDE2_RS03850 f459cca0c818c7e64db095a34f000374 531 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 494 6.2E-53 T 19-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 ALIDE2_RS04550 adcd97858096d4bdec3119217a18e39d 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 19-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ALIDE2_RS04550 adcd97858096d4bdec3119217a18e39d 409 PANTHER PTHR10996 1 369 1.4E-230 T 19-04-2016 ALIDE2_RS04550 adcd97858096d4bdec3119217a18e39d 409 PANTHER PTHR10996:SF18 1 369 1.4E-230 T 19-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 ALIDE2_RS04550 adcd97858096d4bdec3119217a18e39d 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 1.2E-47 T 19-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ALIDE2_RS04550 adcd97858096d4bdec3119217a18e39d 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 6.5E-37 T 19-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS04550 adcd97858096d4bdec3119217a18e39d 409 SUPERFAMILY SSF55021 332 408 9.16E-17 T 19-04-2016 ALIDE2_RS04550 adcd97858096d4bdec3119217a18e39d 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 19-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ALIDE2_RS04550 adcd97858096d4bdec3119217a18e39d 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 19-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ALIDE2_RS04550 adcd97858096d4bdec3119217a18e39d 409 SUPERFAMILY SSF52283 7 134 4.25E-48 T 19-04-2016 ALIDE2_RS04550 adcd97858096d4bdec3119217a18e39d 409 SUPERFAMILY SSF51735 108 295 6.21E-54 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04550 adcd97858096d4bdec3119217a18e39d 409 Gene3D G3DSA:3.40.50.720 120 297 6.3E-57 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04550 adcd97858096d4bdec3119217a18e39d 409 Gene3D G3DSA:3.40.50.720 8 119 1.0E-34 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04550 adcd97858096d4bdec3119217a18e39d 409 Gene3D G3DSA:3.30.70.260 324 408 1.9E-27 T 19-04-2016 ALIDE2_RS07605 bb83bcdbddca182575d6e5b4726ace52 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 220 2.5E-22 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS07605 bb83bcdbddca182575d6e5b4726ace52 388 Gene3D G3DSA:1.20.140.10 223 387 3.9E-54 T 19-04-2016 ALIDE2_RS07605 bb83bcdbddca182575d6e5b4726ace52 388 PANTHER PTHR10909:SF285 8 388 2.2E-242 T 19-04-2016 ALIDE2_RS07605 bb83bcdbddca182575d6e5b4726ace52 388 Gene3D G3DSA:2.40.110.10 122 222 1.7E-30 T 19-04-2016 ALIDE2_RS07605 bb83bcdbddca182575d6e5b4726ace52 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 117 9.8E-24 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS07605 bb83bcdbddca182575d6e5b4726ace52 388 SUPERFAMILY SSF56645 6 232 3.8E-59 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS07605 bb83bcdbddca182575d6e5b4726ace52 388 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS07605 bb83bcdbddca182575d6e5b4726ace52 388 SUPERFAMILY SSF47203 233 386 5.96E-44 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS07605 bb83bcdbddca182575d6e5b4726ace52 388 PANTHER PTHR10909 8 388 2.2E-242 T 19-04-2016 ALIDE2_RS07605 bb83bcdbddca182575d6e5b4726ace52 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 379 3.2E-33 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS07605 bb83bcdbddca182575d6e5b4726ace52 388 Gene3D G3DSA:1.10.540.10 7 117 2.1E-30 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS12350 f8834cbb0842472c7ee4ea4d1fa25952 321 SUPERFAMILY SSF53850 81 285 1.38E-16 T 19-04-2016 ALIDE2_RS12350 f8834cbb0842472c7ee4ea4d1fa25952 321 Gene3D G3DSA:3.40.190.10 123 238 8.8E-6 T 19-04-2016 ALIDE2_RS12350 f8834cbb0842472c7ee4ea4d1fa25952 321 PIRSF PIRSF017082 1 321 4.9E-85 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12350 f8834cbb0842472c7ee4ea4d1fa25952 321 PANTHER PTHR30349:SF16 1 280 7.2E-77 T 19-04-2016 ALIDE2_RS12350 f8834cbb0842472c7ee4ea4d1fa25952 321 PANTHER PTHR30349 1 280 7.2E-77 T 19-04-2016 ALIDE2_RS12350 f8834cbb0842472c7ee4ea4d1fa25952 321 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 316 8.1E-82 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01230 68a35c83dd27c645baba44c7e0986c55 324 Pfam PF05704 Capsular polysaccharide synthesis protein 58 193 9.2E-17 T 19-04-2016 IPR008441 Capsular polysaccharide synthesis ALIDE2_RS01230 68a35c83dd27c645baba44c7e0986c55 324 SUPERFAMILY SSF53448 52 195 2.44E-21 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS14975 d6fc8a984a5fd7595fe53225f7800550 426 PIRSF PIRSF006066 1 426 1.5E-136 T 19-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 ALIDE2_RS14975 d6fc8a984a5fd7595fe53225f7800550 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 417 5.0E-113 T 19-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit ALIDE2_RS14975 d6fc8a984a5fd7595fe53225f7800550 426 PANTHER PTHR33362 6 425 1.2E-185 T 19-04-2016 ALIDE2_RS14975 d6fc8a984a5fd7595fe53225f7800550 426 PANTHER PTHR33362:SF9 6 425 1.2E-185 T 19-04-2016 ALIDE2_RS14975 d6fc8a984a5fd7595fe53225f7800550 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 420 3.6E-137 T 19-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 ALIDE2_RS01150 245befded2f08dcc0ae06181fe1f39b2 412 Gene3D G3DSA:1.10.1060.10 8 105 7.4E-24 T 19-04-2016 ALIDE2_RS01150 245befded2f08dcc0ae06181fe1f39b2 412 PIRSF PIRSF000139 6 412 6.1E-106 T 19-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit ALIDE2_RS01150 245befded2f08dcc0ae06181fe1f39b2 412 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS01150 245befded2f08dcc0ae06181fe1f39b2 412 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS01150 245befded2f08dcc0ae06181fe1f39b2 412 PANTHER PTHR32479:SF2 14 410 1.2E-104 T 19-04-2016 ALIDE2_RS01150 245befded2f08dcc0ae06181fe1f39b2 412 Pfam PF02754 Cysteine-rich domain 169 254 2.6E-10 T 19-04-2016 IPR004017 Cysteine-rich domain ALIDE2_RS01150 245befded2f08dcc0ae06181fe1f39b2 412 Pfam PF02754 Cysteine-rich domain 304 391 5.5E-6 T 19-04-2016 IPR004017 Cysteine-rich domain ALIDE2_RS01150 245befded2f08dcc0ae06181fe1f39b2 412 PANTHER PTHR32479 14 410 1.2E-104 T 19-04-2016 ALIDE2_RS01150 245befded2f08dcc0ae06181fe1f39b2 412 SUPERFAMILY SSF46548 7 102 1.94E-22 T 19-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 ALIDE2_RS01150 245befded2f08dcc0ae06181fe1f39b2 412 Pfam PF12838 4Fe-4S dicluster domain 24 89 7.6E-13 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS12260 762dc0a2e852f8ec74d91421e2aaaddb 409 Gene3D G3DSA:2.40.110.10 149 245 2.6E-31 T 19-04-2016 ALIDE2_RS12260 762dc0a2e852f8ec74d91421e2aaaddb 409 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 29 144 2.5E-10 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS12260 762dc0a2e852f8ec74d91421e2aaaddb 409 SUPERFAMILY SSF47203 254 406 1.22E-45 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS12260 762dc0a2e852f8ec74d91421e2aaaddb 409 PANTHER PTHR10909:SF305 19 407 5.1E-109 T 19-04-2016 ALIDE2_RS12260 762dc0a2e852f8ec74d91421e2aaaddb 409 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 149 242 4.5E-19 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS12260 762dc0a2e852f8ec74d91421e2aaaddb 409 Gene3D G3DSA:1.10.540.10 18 146 3.5E-13 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS12260 762dc0a2e852f8ec74d91421e2aaaddb 409 PANTHER PTHR10909 19 407 5.1E-109 T 19-04-2016 ALIDE2_RS12260 762dc0a2e852f8ec74d91421e2aaaddb 409 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 256 404 4.8E-42 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS12260 762dc0a2e852f8ec74d91421e2aaaddb 409 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 151 163 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS12260 762dc0a2e852f8ec74d91421e2aaaddb 409 SUPERFAMILY SSF56645 25 265 4.71E-53 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS12260 762dc0a2e852f8ec74d91421e2aaaddb 409 Gene3D G3DSA:1.20.140.10 246 407 1.1E-55 T 19-04-2016 ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 SUPERFAMILY SSF56059 83 348 1.94E-68 T 19-04-2016 ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 SUPERFAMILY SSF52440 1 113 2.45E-48 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 Pfam PF00364 Biotin-requiring enzyme 618 680 1.7E-15 T 19-04-2016 IPR000089 Biotin/lipoyl attachment ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 SMART SM00878 336 452 5.8E-62 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 Gene3D G3DSA:3.30.1490.20 129 202 1.4E-29 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 Gene3D G3DSA:2.40.50.100 616 681 7.7E-20 T 19-04-2016 ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 SUPERFAMILY SSF51230 604 681 5.5E-19 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 SUPERFAMILY SSF51246 331 456 7.85E-43 T 19-04-2016 IPR011054 Rudiment single hybrid motif ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 Pfam PF02785 Biotin carboxylase C-terminal domain 336 452 4.2E-38 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 638 655 - T 19-04-2016 IPR001882 Biotin-binding site ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 8.3E-81 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 PANTHER PTHR18866 1 570 0.0 T 19-04-2016 ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 PANTHER PTHR18866 589 681 0.0 T 19-04-2016 ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 Gene3D G3DSA:3.30.470.20 204 456 3.1E-103 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 Gene3D G3DSA:3.40.50.20 1 128 9.9E-50 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS12380 d6c90d67960e6252fbe5ba3a7c059c7f 682 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 108 1.5E-45 T 19-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain ALIDE2_RS10855 f4b599be89bcc4bdb63840b6225f2ecc 181 Pfam PF11000 Protein of unknown function (DUF2840) 32 178 3.4E-62 T 19-04-2016 IPR021263 Protein of unknown function DUF2840 ALIDE2_RS07955 f4b599be89bcc4bdb63840b6225f2ecc 181 Pfam PF11000 Protein of unknown function (DUF2840) 32 178 3.4E-62 T 19-04-2016 IPR021263 Protein of unknown function DUF2840 ALIDE2_RS02100 9953a77f4daa2a297f7bc6e6df90d5fd 88 Pfam PF01527 Transposase 2 71 1.5E-17 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS02100 9953a77f4daa2a297f7bc6e6df90d5fd 88 PANTHER PTHR33609 2 87 7.1E-38 T 19-04-2016 ALIDE2_RS02100 9953a77f4daa2a297f7bc6e6df90d5fd 88 Gene3D G3DSA:1.10.10.60 15 83 6.2E-10 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS02100 9953a77f4daa2a297f7bc6e6df90d5fd 88 SUPERFAMILY SSF46689 1 69 7.26E-12 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS19680 9953a77f4daa2a297f7bc6e6df90d5fd 88 Pfam PF01527 Transposase 2 71 1.5E-17 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS19680 9953a77f4daa2a297f7bc6e6df90d5fd 88 PANTHER PTHR33609 2 87 7.1E-38 T 19-04-2016 ALIDE2_RS19680 9953a77f4daa2a297f7bc6e6df90d5fd 88 Gene3D G3DSA:1.10.10.60 15 83 6.2E-10 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS19680 9953a77f4daa2a297f7bc6e6df90d5fd 88 SUPERFAMILY SSF46689 1 69 7.26E-12 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS19100 9953a77f4daa2a297f7bc6e6df90d5fd 88 Pfam PF01527 Transposase 2 71 1.5E-17 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS19100 9953a77f4daa2a297f7bc6e6df90d5fd 88 PANTHER PTHR33609 2 87 7.1E-38 T 19-04-2016 ALIDE2_RS19100 9953a77f4daa2a297f7bc6e6df90d5fd 88 Gene3D G3DSA:1.10.10.60 15 83 6.2E-10 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS19100 9953a77f4daa2a297f7bc6e6df90d5fd 88 SUPERFAMILY SSF46689 1 69 7.26E-12 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS19495 182fe482ae93a86a67fbf83aa4c42d15 274 PANTHER PTHR30118 1 271 6.7E-52 T 19-04-2016 ALIDE2_RS19495 182fe482ae93a86a67fbf83aa4c42d15 274 Pfam PF03466 LysR substrate binding domain 60 262 1.4E-20 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS19495 182fe482ae93a86a67fbf83aa4c42d15 274 PANTHER PTHR30118:SF8 1 271 6.7E-52 T 19-04-2016 ALIDE2_RS19495 182fe482ae93a86a67fbf83aa4c42d15 274 SUPERFAMILY SSF53850 54 258 3.08E-33 T 19-04-2016 ALIDE2_RS19495 182fe482ae93a86a67fbf83aa4c42d15 274 Gene3D G3DSA:3.40.190.10 237 263 3.6E-22 T 19-04-2016 ALIDE2_RS19495 182fe482ae93a86a67fbf83aa4c42d15 274 Gene3D G3DSA:3.40.190.10 54 136 3.6E-22 T 19-04-2016 ALIDE2_RS19495 182fe482ae93a86a67fbf83aa4c42d15 274 Gene3D G3DSA:3.40.190.10 137 233 5.2E-16 T 19-04-2016 ALIDE2_RS19495 182fe482ae93a86a67fbf83aa4c42d15 274 Gene3D G3DSA:1.10.10.10 1 48 6.9E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22605 9f7141c73e8010374fcf15fc213c709b 377 Gene3D G3DSA:3.40.50.300 15 254 1.9E-81 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22605 9f7141c73e8010374fcf15fc213c709b 377 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 18 371 6.4E-155 T 19-04-2016 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 ALIDE2_RS22605 9f7141c73e8010374fcf15fc213c709b 377 PANTHER PTHR24220:SF150 21 305 6.8E-124 T 19-04-2016 ALIDE2_RS22605 9f7141c73e8010374fcf15fc213c709b 377 SMART SM00382 44 227 3.4E-19 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS22605 9f7141c73e8010374fcf15fc213c709b 377 SUPERFAMILY SSF50331 253 370 1.98E-7 T 19-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal ALIDE2_RS22605 9f7141c73e8010374fcf15fc213c709b 377 Pfam PF00005 ABC transporter 35 177 1.2E-33 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS22605 9f7141c73e8010374fcf15fc213c709b 377 PANTHER PTHR24220 21 305 6.8E-124 T 19-04-2016 ALIDE2_RS22605 9f7141c73e8010374fcf15fc213c709b 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS22605 9f7141c73e8010374fcf15fc213c709b 377 SUPERFAMILY SSF52540 20 257 1.24E-86 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11700 28078c45207fd07543c87fb533870350 500 Gene3D G3DSA:1.10.10.10 345 393 9.8E-4 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11700 28078c45207fd07543c87fb533870350 500 PANTHER PTHR30154 335 486 2.6E-44 T 19-04-2016 ALIDE2_RS11700 28078c45207fd07543c87fb533870350 500 PANTHER PTHR30154:SF21 335 486 2.6E-44 T 19-04-2016 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 PRINTS PR00986 Valyl-tRNA synthetase signature 505 523 3.2E-36 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 PRINTS PR00986 Valyl-tRNA synthetase signature 53 64 3.2E-36 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 PRINTS PR00986 Valyl-tRNA synthetase signature 247 264 3.2E-36 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 PRINTS PR00986 Valyl-tRNA synthetase signature 470 491 3.2E-36 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 PRINTS PR00986 Valyl-tRNA synthetase signature 363 376 3.2E-36 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 891 956 8.2E-21 T 19-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 Gene3D G3DSA:3.40.50.620 15 210 1.4E-137 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 Gene3D G3DSA:3.40.50.620 358 570 1.4E-137 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 Gene3D G3DSA:3.40.50.620 608 629 1.4E-137 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 Gene3D G3DSA:3.90.740.10 211 355 2.4E-51 T 19-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 SUPERFAMILY SSF47323 641 905 2.43E-65 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 Pfam PF08264 Anticodon-binding domain of tRNA 679 827 3.0E-39 T 19-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 Hamap MF_02004 Valine--tRNA ligase [valS]. 13 956 15.601 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 SUPERFAMILY SSF52374 608 640 1.59E-131 T 19-04-2016 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 SUPERFAMILY SSF52374 14 209 1.59E-131 T 19-04-2016 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 SUPERFAMILY SSF52374 358 570 1.59E-131 T 19-04-2016 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 TIGRFAM TIGR00422 valS: valine--tRNA ligase 14 937 0.0 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 Gene3D G3DSA:1.10.287.380 890 956 2.4E-9 T 19-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 PANTHER PTHR11946:SF5 887 954 0.0 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 PANTHER PTHR11946:SF5 607 865 0.0 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 PANTHER PTHR11946:SF5 4 569 0.0 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 PANTHER PTHR11946 887 954 0.0 T 19-04-2016 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 PANTHER PTHR11946 607 865 0.0 T 19-04-2016 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 PANTHER PTHR11946 4 569 0.0 T 19-04-2016 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 Gene3D G3DSA:1.10.730.10 630 820 7.7E-62 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 46 630 1.2E-204 T 19-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 SUPERFAMILY SSF50677 208 359 1.07E-62 T 19-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 60 71 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS08200 4b90d5c1fdb343c0cfff00e3545b5e03 956 SUPERFAMILY SSF46589 891 955 8.89E-17 T 19-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 ALIDE2_RS06745 af8e40cc5dc4dbf57b7a7b9ff103d217 596 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 8.1E-53 T 19-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ALIDE2_RS06745 af8e40cc5dc4dbf57b7a7b9ff103d217 596 SUPERFAMILY SSF52467 161 348 3.27E-46 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS06745 af8e40cc5dc4dbf57b7a7b9ff103d217 596 Gene3D G3DSA:3.40.50.970 2 182 8.5E-61 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS06745 af8e40cc5dc4dbf57b7a7b9ff103d217 596 SUPERFAMILY SSF52518 3 185 1.77E-49 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS06745 af8e40cc5dc4dbf57b7a7b9ff103d217 596 SUPERFAMILY SSF52518 371 577 2.76E-52 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS06745 af8e40cc5dc4dbf57b7a7b9ff103d217 596 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 558 2.1E-33 T 19-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ALIDE2_RS06745 af8e40cc5dc4dbf57b7a7b9ff103d217 596 PANTHER PTHR18968:SF14 1 580 0.0 T 19-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 ALIDE2_RS06745 af8e40cc5dc4dbf57b7a7b9ff103d217 596 Gene3D G3DSA:3.40.50.970 364 586 3.7E-61 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS06745 af8e40cc5dc4dbf57b7a7b9ff103d217 596 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 594 0.0 T 19-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 ALIDE2_RS06745 af8e40cc5dc4dbf57b7a7b9ff103d217 596 Gene3D G3DSA:3.40.50.1220 185 337 1.3E-47 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS06745 af8e40cc5dc4dbf57b7a7b9ff103d217 596 PANTHER PTHR18968 1 580 0.0 T 19-04-2016 ALIDE2_RS06745 af8e40cc5dc4dbf57b7a7b9ff103d217 596 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 327 3.2E-34 T 19-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ALIDE2_RS03230 88e9b1944ca29d7337a8ed73be10a2d6 299 SUPERFAMILY SSF53850 1 267 5.56E-62 T 19-04-2016 ALIDE2_RS03230 88e9b1944ca29d7337a8ed73be10a2d6 299 PANTHER PTHR30085 1 291 1.4E-92 T 19-04-2016 ALIDE2_RS03230 88e9b1944ca29d7337a8ed73be10a2d6 299 SMART SM00062 34 266 8.4E-50 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS03230 88e9b1944ca29d7337a8ed73be10a2d6 299 PANTHER PTHR30085:SF2 1 291 1.4E-92 T 19-04-2016 ALIDE2_RS03230 88e9b1944ca29d7337a8ed73be10a2d6 299 Gene3D G3DSA:3.40.190.10 120 226 1.8E-28 T 19-04-2016 ALIDE2_RS03230 88e9b1944ca29d7337a8ed73be10a2d6 299 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 264 1.3E-47 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS03230 88e9b1944ca29d7337a8ed73be10a2d6 299 Gene3D G3DSA:3.40.190.10 31 119 1.2E-25 T 19-04-2016 ALIDE2_RS03230 88e9b1944ca29d7337a8ed73be10a2d6 299 Gene3D G3DSA:3.40.190.10 227 268 1.2E-25 T 19-04-2016 ALIDE2_RS13315 5b729a560c99120ad097d157366534a1 272 PANTHER PTHR37323:SF1 35 271 1.3E-59 T 19-04-2016 ALIDE2_RS13315 5b729a560c99120ad097d157366534a1 272 Gene3D G3DSA:3.40.630.30 36 242 3.1E-33 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS13315 5b729a560c99120ad097d157366534a1 272 SUPERFAMILY SSF55729 35 245 3.88E-39 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS13315 5b729a560c99120ad097d157366534a1 272 PANTHER PTHR37323 35 271 1.3E-59 T 19-04-2016 ALIDE2_RS13315 5b729a560c99120ad097d157366534a1 272 Pfam PF13444 Acetyltransferase (GNAT) domain 51 151 1.9E-33 T 19-04-2016 ALIDE2_RS14525 fc4deeb5c2684c117ffb0c2eba84558b 431 Pfam PF03781 Sulfatase-modifying factor enzyme 1 193 340 1.1E-22 T 19-04-2016 IPR005532 Sulfatase-modifying factor enzyme ALIDE2_RS14525 fc4deeb5c2684c117ffb0c2eba84558b 431 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 18 428 2.0E-172 T 19-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 ALIDE2_RS14525 fc4deeb5c2684c117ffb0c2eba84558b 431 PANTHER PTHR23150:SF24 16 430 1.3E-112 T 19-04-2016 ALIDE2_RS14525 fc4deeb5c2684c117ffb0c2eba84558b 431 Gene3D G3DSA:3.90.1580.10 178 430 7.9E-64 T 19-04-2016 IPR005532 Sulfatase-modifying factor enzyme ALIDE2_RS14525 fc4deeb5c2684c117ffb0c2eba84558b 431 SUPERFAMILY SSF56436 188 430 3.58E-70 T 19-04-2016 IPR016187 C-type lectin fold ALIDE2_RS14525 fc4deeb5c2684c117ffb0c2eba84558b 431 SUPERFAMILY SSF109854 18 150 1.05E-6 T 19-04-2016 ALIDE2_RS14525 fc4deeb5c2684c117ffb0c2eba84558b 431 Pfam PF12867 DinB superfamily 22 153 1.3E-15 T 19-04-2016 IPR024775 DinB-like domain ALIDE2_RS14525 fc4deeb5c2684c117ffb0c2eba84558b 431 PANTHER PTHR23150 16 430 1.3E-112 T 19-04-2016 ALIDE2_RS07430 e5f7d42844915eab823b14ada925b880 318 Gene3D G3DSA:3.40.190.10 182 276 2.0E-14 T 19-04-2016 ALIDE2_RS07430 e5f7d42844915eab823b14ada925b880 318 Gene3D G3DSA:1.10.10.10 14 93 4.7E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07430 e5f7d42844915eab823b14ada925b880 318 Gene3D G3DSA:3.40.190.10 99 181 3.6E-25 T 19-04-2016 ALIDE2_RS07430 e5f7d42844915eab823b14ada925b880 318 Gene3D G3DSA:3.40.190.10 282 310 3.6E-25 T 19-04-2016 ALIDE2_RS07430 e5f7d42844915eab823b14ada925b880 318 Pfam PF03466 LysR substrate binding domain 109 304 5.3E-19 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS07430 e5f7d42844915eab823b14ada925b880 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 73 2.5E-20 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS07430 e5f7d42844915eab823b14ada925b880 318 SUPERFAMILY SSF53850 99 303 6.05E-34 T 19-04-2016 ALIDE2_RS07430 e5f7d42844915eab823b14ada925b880 318 SUPERFAMILY SSF46785 14 91 1.36E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07430 e5f7d42844915eab823b14ada925b880 318 PANTHER PTHR30118 6 316 4.3E-74 T 19-04-2016 ALIDE2_RS07430 e5f7d42844915eab823b14ada925b880 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 6.4E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS07430 e5f7d42844915eab823b14ada925b880 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 6.4E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS07430 e5f7d42844915eab823b14ada925b880 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 6.4E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 PANTHER PTHR21256 1 426 2.0E-190 T 19-04-2016 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 PRINTS PR00083 Histidinol dehydrogenase signature 221 242 4.0E-69 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 PRINTS PR00083 Histidinol dehydrogenase signature 162 188 4.0E-69 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 PRINTS PR00083 Histidinol dehydrogenase signature 100 127 4.0E-69 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 PRINTS PR00083 Histidinol dehydrogenase signature 243 262 4.0E-69 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 PRINTS PR00083 Histidinol dehydrogenase signature 312 337 4.0E-69 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 PRINTS PR00083 Histidinol dehydrogenase signature 25 49 4.0E-69 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 PRINTS PR00083 Histidinol dehydrogenase signature 353 371 4.0E-69 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 PRINTS PR00083 Histidinol dehydrogenase signature 192 217 4.0E-69 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 Pfam PF00815 Histidinol dehydrogenase 15 419 2.3E-138 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 11 420 32.187 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 25 419 4.6E-135 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 221 253 - T 19-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 PIRSF PIRSF000099 3 423 1.9E-120 T 19-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 SUPERFAMILY SSF53720 19 420 2.35E-67 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 PANTHER PTHR21256:SF11 1 426 2.0E-190 T 19-04-2016 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 Gene3D G3DSA:3.40.50.1980 19 215 1.5E-66 T 19-04-2016 ALIDE2_RS12495 039676b56f0feeeefa0bfcc950e21652 439 Gene3D G3DSA:3.40.50.1980 216 364 4.8E-58 T 19-04-2016 ALIDE2_RS21345 dd1f652154152a2588855b53fd63b2cf 425 PANTHER PTHR37419 4 338 4.0E-54 T 19-04-2016 ALIDE2_RS21345 dd1f652154152a2588855b53fd63b2cf 425 PANTHER PTHR37419:SF3 4 338 4.0E-54 T 19-04-2016 ALIDE2_RS21345 dd1f652154152a2588855b53fd63b2cf 425 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 5 102 1.0E-29 T 19-04-2016 IPR017508 HipA, N-terminal subdomain 1 ALIDE2_RS21345 dd1f652154152a2588855b53fd63b2cf 425 Pfam PF07804 HipA-like C-terminal domain 237 380 7.2E-37 T 19-04-2016 IPR012893 HipA-like, C-terminal ALIDE2_RS21345 dd1f652154152a2588855b53fd63b2cf 425 Pfam PF07805 HipA-like N-terminal domain 148 227 2.2E-15 T 19-04-2016 IPR012894 HipA, N-terminal subdomain 2 ALIDE2_RS21345 dd1f652154152a2588855b53fd63b2cf 425 Pfam PF13657 HipA N-terminal domain 5 102 6.9E-23 T 19-04-2016 IPR017508 HipA, N-terminal subdomain 1 ALIDE2_RS07525 c4abf491259511edc163282b497485e3 539 SUPERFAMILY SSF51905 3 287 9.81E-86 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07525 c4abf491259511edc163282b497485e3 539 SUPERFAMILY SSF51905 472 531 9.81E-86 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07525 c4abf491259511edc163282b497485e3 539 SUPERFAMILY SSF54373 289 473 4.22E-45 T 19-04-2016 ALIDE2_RS07525 c4abf491259511edc163282b497485e3 539 Pfam PF00732 GMC oxidoreductase 4 292 2.4E-81 T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS07525 c4abf491259511edc163282b497485e3 539 PIRSF PIRSF000137 1 536 5.8E-151 T 19-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 ALIDE2_RS07525 c4abf491259511edc163282b497485e3 539 Gene3D G3DSA:3.50.50.60 466 530 5.2E-124 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07525 c4abf491259511edc163282b497485e3 539 Gene3D G3DSA:3.50.50.60 4 125 5.2E-124 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07525 c4abf491259511edc163282b497485e3 539 Gene3D G3DSA:3.50.50.60 186 312 5.2E-124 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07525 c4abf491259511edc163282b497485e3 539 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS07525 c4abf491259511edc163282b497485e3 539 Pfam PF05199 GMC oxidoreductase 387 522 9.8E-41 T 19-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 ALIDE2_RS07525 c4abf491259511edc163282b497485e3 539 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 253 267 - T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS07525 c4abf491259511edc163282b497485e3 539 PANTHER PTHR11552 4 536 2.4E-196 T 19-04-2016 ALIDE2_RS22340 f09daa9e1c11a0395c00ed4ddfbd1e85 392 Gene3D G3DSA:3.30.1540.10 232 313 7.1E-24 T 19-04-2016 ALIDE2_RS22340 f09daa9e1c11a0395c00ed4ddfbd1e85 392 Pfam PF02515 CoA-transferase family III 6 377 1.2E-120 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS22340 f09daa9e1c11a0395c00ed4ddfbd1e85 392 PANTHER PTHR24023:SF593 89 382 4.1E-38 T 19-04-2016 ALIDE2_RS22340 f09daa9e1c11a0395c00ed4ddfbd1e85 392 PANTHER PTHR24023 89 382 4.1E-38 T 19-04-2016 ALIDE2_RS22340 f09daa9e1c11a0395c00ed4ddfbd1e85 392 SUPERFAMILY SSF89796 4 378 1.09E-123 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS22340 f09daa9e1c11a0395c00ed4ddfbd1e85 392 Gene3D G3DSA:3.40.50.10540 314 377 1.3E-104 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS22340 f09daa9e1c11a0395c00ed4ddfbd1e85 392 Gene3D G3DSA:3.40.50.10540 4 226 1.3E-104 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS22760 65a3cf46a764461cfe3dbc7c0ecc47b7 186 Gene3D G3DSA:3.10.640.10 1 186 4.5E-73 T 19-04-2016 ALIDE2_RS22760 65a3cf46a764461cfe3dbc7c0ecc47b7 186 PANTHER PTHR38784:SF1 1 186 6.0E-59 T 19-04-2016 ALIDE2_RS22760 65a3cf46a764461cfe3dbc7c0ecc47b7 186 PANTHER PTHR38784 1 186 6.0E-59 T 19-04-2016 ALIDE2_RS22760 65a3cf46a764461cfe3dbc7c0ecc47b7 186 PIRSF PIRSF011484 1 186 9.1E-60 T 19-04-2016 IPR009822 YaeQ ALIDE2_RS22760 65a3cf46a764461cfe3dbc7c0ecc47b7 186 SMART SM01322 1 184 2.3E-113 T 19-04-2016 IPR009822 YaeQ ALIDE2_RS22760 65a3cf46a764461cfe3dbc7c0ecc47b7 186 SUPERFAMILY SSF52980 2 186 1.37E-63 T 19-04-2016 IPR011335 Restriction endonuclease type II-like ALIDE2_RS22760 65a3cf46a764461cfe3dbc7c0ecc47b7 186 Pfam PF07152 YaeQ protein 1 181 1.2E-69 T 19-04-2016 IPR009822 YaeQ ALIDE2_RS07580 0fe51953429f490882574c47c39d42cb 645 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 610 9.3E-18 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS07580 0fe51953429f490882574c47c39d42cb 645 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 31 83 3.8E-11 T 19-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 ALIDE2_RS07580 0fe51953429f490882574c47c39d42cb 645 SUPERFAMILY SSF56801 23 642 1.96E-141 T 19-04-2016 ALIDE2_RS07580 0fe51953429f490882574c47c39d42cb 645 Gene3D G3DSA:3.30.300.30 517 619 1.6E-22 T 19-04-2016 ALIDE2_RS07580 0fe51953429f490882574c47c39d42cb 645 Gene3D G3DSA:3.40.50.980 98 270 3.4E-35 T 19-04-2016 ALIDE2_RS07580 0fe51953429f490882574c47c39d42cb 645 PANTHER PTHR24095:SF184 1 643 1.1E-193 T 19-04-2016 ALIDE2_RS07580 0fe51953429f490882574c47c39d42cb 645 PANTHER PTHR24095 1 643 1.1E-193 T 19-04-2016 ALIDE2_RS07580 0fe51953429f490882574c47c39d42cb 645 ProSitePatterns PS00455 Putative AMP-binding domain signature. 265 276 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS07580 0fe51953429f490882574c47c39d42cb 645 Pfam PF00501 AMP-binding enzyme 99 522 3.1E-79 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS07580 0fe51953429f490882574c47c39d42cb 645 Gene3D G3DSA:2.30.38.10 442 516 5.3E-8 T 19-04-2016 ALIDE2_RS07580 0fe51953429f490882574c47c39d42cb 645 Gene3D G3DSA:3.40.50.980 271 426 5.9E-29 T 19-04-2016 ALIDE2_RS04120 c63dd29552619b57dd05a3402584513c 424 Gene3D G3DSA:3.65.10.10 21 225 1.6E-68 T 19-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 ALIDE2_RS04120 c63dd29552619b57dd05a3402584513c 424 PANTHER PTHR21090 1 423 3.0E-172 T 19-04-2016 ALIDE2_RS04120 c63dd29552619b57dd05a3402584513c 424 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 413 9.4E-103 T 19-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 ALIDE2_RS04120 c63dd29552619b57dd05a3402584513c 424 SUPERFAMILY SSF55205 1 423 2.29E-135 T 19-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ALIDE2_RS04120 c63dd29552619b57dd05a3402584513c 424 Gene3D G3DSA:3.65.10.10 226 423 2.5E-54 T 19-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 ALIDE2_RS04120 c63dd29552619b57dd05a3402584513c 424 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 422 3.1E-168 T 19-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS04120 c63dd29552619b57dd05a3402584513c 424 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 423 45.516 T 19-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS10675 c7a67f1540b3c0a2eb7a4727c66f2f18 334 PANTHER PTHR13767 1 308 1.4E-105 T 19-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS10675 c7a67f1540b3c0a2eb7a4727c66f2f18 334 SUPERFAMILY SSF55120 14 247 3.17E-74 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS10675 c7a67f1540b3c0a2eb7a4727c66f2f18 334 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 15 308 17.99 T 19-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS10675 c7a67f1540b3c0a2eb7a4727c66f2f18 334 PANTHER PTHR13767:SF2 1 308 1.4E-105 T 19-04-2016 ALIDE2_RS10675 c7a67f1540b3c0a2eb7a4727c66f2f18 334 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 255 308 2.0E-6 T 19-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS10675 c7a67f1540b3c0a2eb7a4727c66f2f18 334 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 16 228 5.5E-71 T 19-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS10675 c7a67f1540b3c0a2eb7a4727c66f2f18 334 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 192 249 1.2E-12 T 19-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal ALIDE2_RS10675 c7a67f1540b3c0a2eb7a4727c66f2f18 334 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 37 191 7.3E-53 T 19-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 ALIDE2_RS10675 c7a67f1540b3c0a2eb7a4727c66f2f18 334 Gene3D G3DSA:2.30.130.10 255 309 4.0E-4 T 19-04-2016 IPR015947 PUA-like domain ALIDE2_RS18505 65f2633d42ffb8abae7fdecad7acbb18 887 Pfam PF00563 EAL domain 638 873 3.4E-71 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS18505 65f2633d42ffb8abae7fdecad7acbb18 887 SMART SM00052 632 878 7.1E-118 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS18505 65f2633d42ffb8abae7fdecad7acbb18 887 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 451 618 3.4E-39 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS18505 65f2633d42ffb8abae7fdecad7acbb18 887 Gene3D G3DSA:3.30.450.20 318 443 2.3E-10 T 19-04-2016 ALIDE2_RS18505 65f2633d42ffb8abae7fdecad7acbb18 887 Pfam PF12860 PAS fold 336 447 2.5E-20 T 19-04-2016 ALIDE2_RS18505 65f2633d42ffb8abae7fdecad7acbb18 887 SUPERFAMILY SSF55073 460 624 9.55E-46 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS18505 65f2633d42ffb8abae7fdecad7acbb18 887 SMART SM00267 444 622 6.8E-58 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS18505 65f2633d42ffb8abae7fdecad7acbb18 887 PANTHER PTHR33121 617 882 1.7E-86 T 19-04-2016 ALIDE2_RS18505 65f2633d42ffb8abae7fdecad7acbb18 887 Gene3D G3DSA:3.30.70.270 457 629 6.7E-54 T 19-04-2016 ALIDE2_RS18505 65f2633d42ffb8abae7fdecad7acbb18 887 SUPERFAMILY SSF141868 638 882 6.67E-88 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS18505 65f2633d42ffb8abae7fdecad7acbb18 887 Gene3D G3DSA:3.20.20.450 635 882 2.8E-96 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS18505 65f2633d42ffb8abae7fdecad7acbb18 887 SUPERFAMILY SSF55785 316 442 1.97E-7 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS18505 65f2633d42ffb8abae7fdecad7acbb18 887 PANTHER PTHR33121:SF13 617 882 1.7E-86 T 19-04-2016 ALIDE2_RS18505 65f2633d42ffb8abae7fdecad7acbb18 887 Pfam PF00990 Diguanylate cyclase, GGDEF domain 455 616 1.2E-46 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS08630 8a8d8aeab9f4c4064caa7cea4f7e05d2 590 PANTHER PTHR24220:SF546 356 460 6.9E-161 T 19-04-2016 ALIDE2_RS08630 8a8d8aeab9f4c4064caa7cea4f7e05d2 590 PANTHER PTHR24220:SF546 264 312 6.9E-161 T 19-04-2016 ALIDE2_RS08630 8a8d8aeab9f4c4064caa7cea4f7e05d2 590 PANTHER PTHR24220:SF546 21 241 6.9E-161 T 19-04-2016 ALIDE2_RS08630 8a8d8aeab9f4c4064caa7cea4f7e05d2 590 SMART SM00382 365 555 3.9E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS08630 8a8d8aeab9f4c4064caa7cea4f7e05d2 590 SMART SM00382 44 254 5.4E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS08630 8a8d8aeab9f4c4064caa7cea4f7e05d2 590 PANTHER PTHR24220 356 460 6.9E-161 T 19-04-2016 ALIDE2_RS08630 8a8d8aeab9f4c4064caa7cea4f7e05d2 590 PANTHER PTHR24220 264 312 6.9E-161 T 19-04-2016 ALIDE2_RS08630 8a8d8aeab9f4c4064caa7cea4f7e05d2 590 PANTHER PTHR24220 21 241 6.9E-161 T 19-04-2016 ALIDE2_RS08630 8a8d8aeab9f4c4064caa7cea4f7e05d2 590 Gene3D G3DSA:3.40.50.300 337 562 4.3E-68 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08630 8a8d8aeab9f4c4064caa7cea4f7e05d2 590 Gene3D G3DSA:3.40.50.300 16 239 2.9E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08630 8a8d8aeab9f4c4064caa7cea4f7e05d2 590 Pfam PF00005 ABC transporter 35 177 7.3E-26 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS08630 8a8d8aeab9f4c4064caa7cea4f7e05d2 590 Pfam PF00005 ABC transporter 357 500 4.6E-29 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS08630 8a8d8aeab9f4c4064caa7cea4f7e05d2 590 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS08630 8a8d8aeab9f4c4064caa7cea4f7e05d2 590 SUPERFAMILY SSF52540 19 240 6.52E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08630 8a8d8aeab9f4c4064caa7cea4f7e05d2 590 SUPERFAMILY SSF52540 340 559 9.46E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 SUPERFAMILY SSF51735 6 275 1.47E-71 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 275 4.3E-47 T 19-04-2016 ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.9E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 4.9E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 4.9E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 202 7.0E-4 T 19-04-2016 ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 PANTHER PTHR24322 142 150 1.9E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 PANTHER PTHR24322 166 197 1.9E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 PANTHER PTHR24322 12 123 1.9E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 Gene3D G3DSA:3.40.50.720 1 275 1.3E-76 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 PANTHER PTHR24322:SF328 142 150 1.9E-37 T 19-04-2016 ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 PANTHER PTHR24322:SF328 166 197 1.9E-37 T 19-04-2016 ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 PANTHER PTHR24322:SF328 12 123 1.9E-37 T 19-04-2016 ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.6E-34 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 3.6E-34 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 238 258 3.6E-34 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 3.6E-34 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 3.6E-34 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15270 1c49d6c7ec6787c76ac114c5f38cbfbe 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.6E-34 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10520 6d924bd25bf855b62cf60aec4fe9316e 227 PANTHER PTHR26402:SF518 1 224 9.1E-66 T 19-04-2016 ALIDE2_RS10520 6d924bd25bf855b62cf60aec4fe9316e 227 SMART SM00448 1 112 1.2E-38 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS10520 6d924bd25bf855b62cf60aec4fe9316e 227 Gene3D G3DSA:1.10.10.10 127 225 2.3E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS10520 6d924bd25bf855b62cf60aec4fe9316e 227 PANTHER PTHR26402 1 224 9.1E-66 T 19-04-2016 ALIDE2_RS10520 6d924bd25bf855b62cf60aec4fe9316e 227 SMART SM00862 150 223 1.7E-15 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS10520 6d924bd25bf855b62cf60aec4fe9316e 227 SUPERFAMILY SSF52172 2 121 1.57E-37 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS10520 6d924bd25bf855b62cf60aec4fe9316e 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 223 4.2E-16 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS10520 6d924bd25bf855b62cf60aec4fe9316e 227 SUPERFAMILY SSF46894 129 224 2.83E-18 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS10520 6d924bd25bf855b62cf60aec4fe9316e 227 Pfam PF00072 Response regulator receiver domain 4 112 1.5E-25 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS10520 6d924bd25bf855b62cf60aec4fe9316e 227 Gene3D G3DSA:3.40.50.2300 1 121 9.7E-37 T 19-04-2016 ALIDE2_RS00115 013e0c4902b3841726a9d758944fd51a 461 SUPERFAMILY SSF55347 159 324 5.62E-46 T 19-04-2016 ALIDE2_RS00115 013e0c4902b3841726a9d758944fd51a 461 Pfam PF00742 Homoserine dehydrogenase 159 337 1.0E-59 T 19-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 ALIDE2_RS00115 013e0c4902b3841726a9d758944fd51a 461 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 205 227 - T 19-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 ALIDE2_RS00115 013e0c4902b3841726a9d758944fd51a 461 PANTHER PTHR21499:SF2 23 341 3.9E-111 T 19-04-2016 ALIDE2_RS00115 013e0c4902b3841726a9d758944fd51a 461 Gene3D G3DSA:3.30.360.10 171 318 1.6E-50 T 19-04-2016 ALIDE2_RS00115 013e0c4902b3841726a9d758944fd51a 461 SUPERFAMILY SSF51735 24 180 8.51E-32 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00115 013e0c4902b3841726a9d758944fd51a 461 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 30 151 4.8E-20 T 19-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 ALIDE2_RS00115 013e0c4902b3841726a9d758944fd51a 461 PANTHER PTHR21499 23 341 3.9E-111 T 19-04-2016 ALIDE2_RS00115 013e0c4902b3841726a9d758944fd51a 461 Gene3D G3DSA:3.40.50.720 24 170 4.8E-44 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS19080 b03382c0ce18a042d2875508ff2a3e02 239 SUPERFAMILY SSF52833 80 231 9.36E-32 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS19080 b03382c0ce18a042d2875508ff2a3e02 239 Gene3D G3DSA:3.40.30.10 106 237 3.1E-37 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS19080 b03382c0ce18a042d2875508ff2a3e02 239 PANTHER PTHR35272 1 239 2.1E-31 T 19-04-2016 ALIDE2_RS19080 b03382c0ce18a042d2875508ff2a3e02 239 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 81 1.5E-20 T 19-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal ALIDE2_RS19080 b03382c0ce18a042d2875508ff2a3e02 239 Gene3D G3DSA:3.10.450.70 23 85 6.3E-19 T 19-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal ALIDE2_RS19080 b03382c0ce18a042d2875508ff2a3e02 239 ProSitePatterns PS00194 Thioredoxin family active site. 117 135 - T 19-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 ALIDE2_RS19080 b03382c0ce18a042d2875508ff2a3e02 239 Pfam PF13098 Thioredoxin-like domain 110 230 2.8E-31 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS19080 b03382c0ce18a042d2875508ff2a3e02 239 SUPERFAMILY SSF54423 24 80 9.42E-11 T 19-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal ALIDE2_RS14950 d03a658f3004a06cebec624df2042359 401 SUPERFAMILY SSF56349 99 378 5.3E-58 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS14950 d03a658f3004a06cebec624df2042359 401 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 101 150 4.9E-7 T 19-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ALIDE2_RS14950 d03a658f3004a06cebec624df2042359 401 Pfam PF13356 Domain of unknown function (DUF4102) 6 93 1.2E-14 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 ALIDE2_RS14950 d03a658f3004a06cebec624df2042359 401 Pfam PF00589 Phage integrase family 205 370 1.6E-17 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS14950 d03a658f3004a06cebec624df2042359 401 PANTHER PTHR30629:SF2 1 357 8.6E-39 T 19-04-2016 ALIDE2_RS14950 d03a658f3004a06cebec624df2042359 401 Gene3D G3DSA:1.10.443.10 203 378 1.3E-30 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS14950 d03a658f3004a06cebec624df2042359 401 Gene3D G3DSA:1.10.150.130 99 193 1.3E-12 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS14950 d03a658f3004a06cebec624df2042359 401 PANTHER PTHR30629 1 357 8.6E-39 T 19-04-2016 ALIDE2_RS21105 1db5a867d9c5e7182eb17c2df083bb84 198 Gene3D G3DSA:3.40.30.10 26 150 5.1E-26 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS21105 1db5a867d9c5e7182eb17c2df083bb84 198 PANTHER PTHR10681:SF104 22 183 1.2E-24 T 19-04-2016 ALIDE2_RS21105 1db5a867d9c5e7182eb17c2df083bb84 198 SUPERFAMILY SSF52833 23 198 4.6E-30 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS21105 1db5a867d9c5e7182eb17c2df083bb84 198 Pfam PF00578 AhpC/TSA family 26 148 1.4E-16 T 19-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS21105 1db5a867d9c5e7182eb17c2df083bb84 198 PANTHER PTHR10681 22 183 1.2E-24 T 19-04-2016 ALIDE2_RS11870 6b5b6ad3990ca83e6a9125cbe0205457 276 ProSitePatterns PS00194 Thioredoxin family active site. 163 181 - T 19-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 ALIDE2_RS11870 6b5b6ad3990ca83e6a9125cbe0205457 276 Gene3D G3DSA:3.40.30.10 115 268 8.9E-32 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS11870 6b5b6ad3990ca83e6a9125cbe0205457 276 PANTHER PTHR10438:SF244 49 86 2.7E-17 T 19-04-2016 ALIDE2_RS11870 6b5b6ad3990ca83e6a9125cbe0205457 276 PANTHER PTHR10438:SF244 222 268 2.7E-17 T 19-04-2016 ALIDE2_RS11870 6b5b6ad3990ca83e6a9125cbe0205457 276 PANTHER PTHR10438:SF244 155 198 2.7E-17 T 19-04-2016 ALIDE2_RS11870 6b5b6ad3990ca83e6a9125cbe0205457 276 SUPERFAMILY SSF52833 140 269 6.46E-31 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS11870 6b5b6ad3990ca83e6a9125cbe0205457 276 PANTHER PTHR10438 49 86 2.7E-17 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ALIDE2_RS11870 6b5b6ad3990ca83e6a9125cbe0205457 276 PANTHER PTHR10438 222 268 2.7E-17 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ALIDE2_RS11870 6b5b6ad3990ca83e6a9125cbe0205457 276 PANTHER PTHR10438 155 198 2.7E-17 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ALIDE2_RS11870 6b5b6ad3990ca83e6a9125cbe0205457 276 Pfam PF08534 Redoxin 140 255 1.3E-11 T 19-04-2016 IPR013740 Redoxin GO:0016491 ALIDE2_RS15380 9e8c28aaecbd0528ce11b8b69d998883 455 PRINTS PR00315 GTP-binding elongation factor signature 160 169 3.7E-13 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS15380 9e8c28aaecbd0528ce11b8b69d998883 455 PRINTS PR00315 GTP-binding elongation factor signature 79 87 3.7E-13 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS15380 9e8c28aaecbd0528ce11b8b69d998883 455 PRINTS PR00315 GTP-binding elongation factor signature 26 39 3.7E-13 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS15380 9e8c28aaecbd0528ce11b8b69d998883 455 PRINTS PR00315 GTP-binding elongation factor signature 115 126 3.7E-13 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS15380 9e8c28aaecbd0528ce11b8b69d998883 455 PRINTS PR00315 GTP-binding elongation factor signature 99 109 3.7E-13 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ALIDE2_RS15380 9e8c28aaecbd0528ce11b8b69d998883 455 PANTHER PTHR23115 3 326 2.8E-46 T 19-04-2016 ALIDE2_RS15380 9e8c28aaecbd0528ce11b8b69d998883 455 SUPERFAMILY SSF52540 25 249 8.4E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15380 9e8c28aaecbd0528ce11b8b69d998883 455 Gene3D G3DSA:3.40.50.300 23 226 1.8E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15380 9e8c28aaecbd0528ce11b8b69d998883 455 PANTHER PTHR23115:SF91 3 326 2.8E-46 T 19-04-2016 ALIDE2_RS15380 9e8c28aaecbd0528ce11b8b69d998883 455 Gene3D G3DSA:2.40.30.10 240 334 2.4E-9 T 19-04-2016 ALIDE2_RS15380 9e8c28aaecbd0528ce11b8b69d998883 455 SUPERFAMILY SSF50465 354 453 1.73E-24 T 19-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ALIDE2_RS15380 9e8c28aaecbd0528ce11b8b69d998883 455 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 72 87 - T 19-04-2016 IPR031157 Tr-type G domain, conserved site ALIDE2_RS15380 9e8c28aaecbd0528ce11b8b69d998883 455 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 452 9.5E-116 T 19-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 ALIDE2_RS15380 9e8c28aaecbd0528ce11b8b69d998883 455 SUPERFAMILY SSF50447 238 330 3.06E-12 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain ALIDE2_RS15380 9e8c28aaecbd0528ce11b8b69d998883 455 Pfam PF00009 Elongation factor Tu GTP binding domain 25 223 3.0E-34 T 19-04-2016 ALIDE2_RS11295 84b26d7277b4e377bb521ac253a64524 378 Pfam PF01266 FAD dependent oxidoreductase 6 335 8.6E-46 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS11295 84b26d7277b4e377bb521ac253a64524 378 PANTHER PTHR13847:SF180 6 369 8.1E-41 T 19-04-2016 ALIDE2_RS11295 84b26d7277b4e377bb521ac253a64524 378 PANTHER PTHR13847 6 369 8.1E-41 T 19-04-2016 ALIDE2_RS11295 84b26d7277b4e377bb521ac253a64524 378 SUPERFAMILY SSF54373 228 311 7.46E-11 T 19-04-2016 ALIDE2_RS11295 84b26d7277b4e377bb521ac253a64524 378 Gene3D G3DSA:3.50.50.60 147 227 8.7E-34 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11295 84b26d7277b4e377bb521ac253a64524 378 Gene3D G3DSA:3.50.50.60 311 367 8.7E-34 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11295 84b26d7277b4e377bb521ac253a64524 378 Gene3D G3DSA:3.50.50.60 6 83 8.7E-34 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11295 84b26d7277b4e377bb521ac253a64524 378 Gene3D G3DSA:3.30.9.10 91 146 5.6E-5 T 19-04-2016 ALIDE2_RS11295 84b26d7277b4e377bb521ac253a64524 378 Gene3D G3DSA:3.30.9.10 228 247 5.6E-5 T 19-04-2016 ALIDE2_RS11295 84b26d7277b4e377bb521ac253a64524 378 SUPERFAMILY SSF51905 6 228 2.81E-38 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11295 84b26d7277b4e377bb521ac253a64524 378 SUPERFAMILY SSF51905 311 368 2.81E-38 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS13175 d2b36f4c209c7a073098dcd726eb49ac 267 SUPERFAMILY SSF159713 22 260 2.88E-47 T 19-04-2016 ALIDE2_RS13175 d2b36f4c209c7a073098dcd726eb49ac 267 Pfam PF13938 Putative heavy-metal chelation 23 109 3.2E-12 T 19-04-2016 IPR025251 Domain of unknown function DUF4213 ALIDE2_RS13175 d2b36f4c209c7a073098dcd726eb49ac 267 Gene3D G3DSA:3.40.50.150 99 136 8.8E-5 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS13175 d2b36f4c209c7a073098dcd726eb49ac 267 Gene3D G3DSA:3.40.50.150 173 237 8.8E-5 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS13175 d2b36f4c209c7a073098dcd726eb49ac 267 Pfam PF04016 Putative heavy-metal chelation 136 263 5.1E-32 T 19-04-2016 IPR007161 Putative heavy-metal chelation domain ALIDE2_RS08570 1f11da314908fca98a3fb20985a8d7c5 318 SUPERFAMILY SSF53850 109 315 5.79E-43 T 19-04-2016 ALIDE2_RS08570 1f11da314908fca98a3fb20985a8d7c5 318 Pfam PF03466 LysR substrate binding domain 108 312 1.9E-41 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS08570 1f11da314908fca98a3fb20985a8d7c5 318 Gene3D G3DSA:3.40.190.10 197 281 5.6E-25 T 19-04-2016 ALIDE2_RS08570 1f11da314908fca98a3fb20985a8d7c5 318 Gene3D G3DSA:1.10.10.10 24 103 2.1E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08570 1f11da314908fca98a3fb20985a8d7c5 318 SUPERFAMILY SSF46785 23 132 5.99E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08570 1f11da314908fca98a3fb20985a8d7c5 318 Gene3D G3DSA:3.40.190.10 112 196 8.9E-23 T 19-04-2016 ALIDE2_RS08570 1f11da314908fca98a3fb20985a8d7c5 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 83 5.3E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS08570 1f11da314908fca98a3fb20985a8d7c5 318 PANTHER PTHR30537 16 312 8.9E-155 T 19-04-2016 ALIDE2_RS08570 1f11da314908fca98a3fb20985a8d7c5 318 PANTHER PTHR30537:SF18 16 312 8.9E-155 T 19-04-2016 ALIDE2_RS13865 4b544bfffa6d1eb390be030166edaa1a 216 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 165 5.0E-9 T 19-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 ALIDE2_RS13865 4b544bfffa6d1eb390be030166edaa1a 216 Pfam PF05280 Flagellar transcriptional activator (FlhC) 2 173 5.7E-41 T 19-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 ALIDE2_RS13865 4b544bfffa6d1eb390be030166edaa1a 216 SUPERFAMILY SSF160930 6 164 4.45E-30 T 19-04-2016 ALIDE2_RS08610 2289ec15169652011724ec515f22a766 586 PANTHER PTHR36837:SF2 9 586 3.7E-207 T 19-04-2016 ALIDE2_RS08610 2289ec15169652011724ec515f22a766 586 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 98 267 6.4E-57 T 19-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- ALIDE2_RS08610 2289ec15169652011724ec515f22a766 586 SUPERFAMILY SSF53474 212 511 9.22E-42 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS08610 2289ec15169652011724ec515f22a766 586 Pfam PF12551 Poly-beta-hydroxybutyrate polymerase N terminal 23 61 2.2E-16 T 19-04-2016 IPR022211 Poly-beta-hydroxybutyrate polymerase N-terminal ALIDE2_RS08610 2289ec15169652011724ec515f22a766 586 PANTHER PTHR36837 9 586 3.7E-207 T 19-04-2016 ALIDE2_RS08610 2289ec15169652011724ec515f22a766 586 Gene3D G3DSA:3.40.50.1820 218 558 6.9E-31 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS07565 d59ff1281a3e1af86d5b35f622bdfd9b 291 SUPERFAMILY SSF54637 10 159 3.29E-37 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS07565 d59ff1281a3e1af86d5b35f622bdfd9b 291 Gene3D G3DSA:3.10.129.10 147 288 2.4E-43 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS07565 d59ff1281a3e1af86d5b35f622bdfd9b 291 Pfam PF01575 MaoC like domain 171 277 2.2E-24 T 19-04-2016 IPR002539 MaoC-like domain ALIDE2_RS07565 d59ff1281a3e1af86d5b35f622bdfd9b 291 Pfam PF13452 N-terminal half of MaoC dehydratase 56 141 1.0E-8 T 19-04-2016 ALIDE2_RS07565 d59ff1281a3e1af86d5b35f622bdfd9b 291 PANTHER PTHR13078 1 291 5.0E-107 T 19-04-2016 ALIDE2_RS07565 d59ff1281a3e1af86d5b35f622bdfd9b 291 PANTHER PTHR13078:SF55 1 291 5.0E-107 T 19-04-2016 ALIDE2_RS07565 d59ff1281a3e1af86d5b35f622bdfd9b 291 SUPERFAMILY SSF54637 170 285 3.65E-31 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS07565 d59ff1281a3e1af86d5b35f622bdfd9b 291 Gene3D G3DSA:3.10.129.10 1 146 1.0E-43 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS09815 a5eea4f3d3edf1998ef5edc2260a1953 640 PANTHER PTHR30629 1 432 2.3E-134 T 19-04-2016 ALIDE2_RS09815 a5eea4f3d3edf1998ef5edc2260a1953 640 SUPERFAMILY SSF56349 98 399 5.0E-46 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS09815 a5eea4f3d3edf1998ef5edc2260a1953 640 PANTHER PTHR30629:SF4 1 432 2.3E-134 T 19-04-2016 ALIDE2_RS09815 a5eea4f3d3edf1998ef5edc2260a1953 640 Gene3D G3DSA:1.10.443.10 218 397 4.5E-20 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS09815 a5eea4f3d3edf1998ef5edc2260a1953 640 Gene3D G3DSA:1.10.150.130 98 181 9.5E-10 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS09815 a5eea4f3d3edf1998ef5edc2260a1953 640 Pfam PF13356 Domain of unknown function (DUF4102) 3 86 2.8E-15 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 ALIDE2_RS09815 a5eea4f3d3edf1998ef5edc2260a1953 640 Pfam PF00589 Phage integrase family 211 389 3.6E-17 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 TIGRFAM TIGR03186 AKGDH_not_PDH: alpha-ketoglutarate dehydrogenase 11 874 0.0 T 19-04-2016 IPR017600 Alpha-ketoglutarate dehydrogenase ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 SUPERFAMILY SSF52518 486 713 4.93E-92 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 Gene3D G3DSA:3.40.50.970 62 482 3.3E-135 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 PANTHER PTHR11624 376 467 0.0 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 PANTHER PTHR11624 79 307 0.0 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 PANTHER PTHR11624 487 548 0.0 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 PANTHER PTHR11624 566 874 0.0 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 SUPERFAMILY SSF52518 62 479 2.55E-119 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 PANTHER PTHR11624:SF67 376 467 0.0 T 19-04-2016 ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 PANTHER PTHR11624:SF67 79 307 0.0 T 19-04-2016 ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 PANTHER PTHR11624:SF67 487 548 0.0 T 19-04-2016 ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 PANTHER PTHR11624:SF67 566 874 0.0 T 19-04-2016 ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 PIRSF PIRSF000156 6 875 0.0 T 19-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 110 311 2.1E-5 T 19-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 Gene3D G3DSA:3.40.50.920 720 874 4.4E-50 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 SUPERFAMILY SSF52922 715 874 2.62E-36 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 Gene3D G3DSA:3.40.50.970 486 716 3.2E-108 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS11420 f4eb6f196dfd3eb3e63be3d62abb5795 875 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 11 874 0.0 T 19-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ALIDE2_RS02395 fd52ac8645e69fd152fa371f943aed5c 343 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 64 339 7.2E-52 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS02395 fd52ac8645e69fd152fa371f943aed5c 343 PANTHER PTHR30349 33 334 9.1E-48 T 19-04-2016 ALIDE2_RS02395 fd52ac8645e69fd152fa371f943aed5c 343 SUPERFAMILY SSF53850 133 293 8.07E-6 T 19-04-2016 ALIDE2_RS02395 fd52ac8645e69fd152fa371f943aed5c 343 PANTHER PTHR30349:SF32 33 334 9.1E-48 T 19-04-2016 ALIDE2_RS02395 fd52ac8645e69fd152fa371f943aed5c 343 PIRSF PIRSF017082 10 341 1.1E-55 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS19315 ab31eb88f767961245276809f96d48fa 553 Gene3D G3DSA:1.10.3720.10 310 548 9.2E-25 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS19315 ab31eb88f767961245276809f96d48fa 553 Gene3D G3DSA:1.10.3720.10 18 279 1.8E-33 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS19315 ab31eb88f767961245276809f96d48fa 553 SUPERFAMILY SSF161098 16 274 6.73E-42 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS19315 ab31eb88f767961245276809f96d48fa 553 PANTHER PTHR30183:SF2 24 553 7.8E-152 T 19-04-2016 ALIDE2_RS19315 ab31eb88f767961245276809f96d48fa 553 PANTHER PTHR30183 24 553 7.8E-152 T 19-04-2016 ALIDE2_RS19315 ab31eb88f767961245276809f96d48fa 553 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 267 6.0E-13 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS19315 ab31eb88f767961245276809f96d48fa 553 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 361 527 6.9E-6 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS19315 ab31eb88f767961245276809f96d48fa 553 SUPERFAMILY SSF161098 305 547 7.33E-34 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS23930 bba7714009e6eedacddfeefa6d1b08be 76 Pfam PF13932 GidA associated domain 1 70 4.2E-24 T 19-04-2016 IPR026904 GidA associated domain 3 ALIDE2_RS23930 bba7714009e6eedacddfeefa6d1b08be 76 SMART SM01228 1 71 2.6E-42 T 19-04-2016 ALIDE2_RS23930 bba7714009e6eedacddfeefa6d1b08be 76 PANTHER PTHR11806 1 75 1.3E-32 T 19-04-2016 ALIDE2_RS01735 f26ec9fb9625e95f776aa1ec9caf2be7 125 PIRSF PIRSF002133 1 124 3.9E-54 T 19-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01735 f26ec9fb9625e95f776aa1ec9caf2be7 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.758 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS01735 f26ec9fb9625e95f776aa1ec9caf2be7 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 7.7E-70 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS01735 f26ec9fb9625e95f776aa1ec9caf2be7 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 19-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01735 f26ec9fb9625e95f776aa1ec9caf2be7 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.4E-61 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS01735 f26ec9fb9625e95f776aa1ec9caf2be7 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.4E-61 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS01735 f26ec9fb9625e95f776aa1ec9caf2be7 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.4E-61 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS01735 f26ec9fb9625e95f776aa1ec9caf2be7 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.4E-61 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS01735 f26ec9fb9625e95f776aa1ec9caf2be7 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.4E-61 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS01735 f26ec9fb9625e95f776aa1ec9caf2be7 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.4E-61 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS01735 f26ec9fb9625e95f776aa1ec9caf2be7 125 Pfam PF00164 Ribosomal protein S12/S23 4 123 1.7E-43 T 19-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01735 f26ec9fb9625e95f776aa1ec9caf2be7 125 PANTHER PTHR11652 1 116 2.8E-76 T 19-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01735 f26ec9fb9625e95f776aa1ec9caf2be7 125 Gene3D G3DSA:2.40.50.140 1 123 9.5E-66 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS01735 f26ec9fb9625e95f776aa1ec9caf2be7 125 SUPERFAMILY SSF50249 2 124 2.23E-52 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS13775 2564148652c4240df738bfd0b58a400b 152 TIGRFAM TIGR03738 PRTRC_C: PRTRC system protein C 5 68 5.4E-28 T 19-04-2016 IPR022289 ParB-related, ThiF-related cassette, protein C ALIDE2_RS13775 2564148652c4240df738bfd0b58a400b 152 Pfam PF14454 Prokaryotic Ubiquitin 4 66 9.3E-21 T 19-04-2016 IPR032866 Prokaryotic Ubiquitin ALIDE2_RS09265 2af31bb3c472bd247146f3d62db1a378 252 Pfam PF00378 Enoyl-CoA hydratase/isomerase 2 251 1.7E-50 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS09265 2af31bb3c472bd247146f3d62db1a378 252 Gene3D G3DSA:3.90.226.10 1 192 5.2E-55 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS09265 2af31bb3c472bd247146f3d62db1a378 252 SUPERFAMILY SSF52096 1 252 4.98E-73 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS09265 2af31bb3c472bd247146f3d62db1a378 252 PANTHER PTHR11941 1 249 1.9E-70 T 19-04-2016 ALIDE2_RS09265 2af31bb3c472bd247146f3d62db1a378 252 Gene3D G3DSA:1.10.12.10 195 252 1.3E-17 T 19-04-2016 IPR014748 Crontonase, C-terminal ALIDE2_RS19005 7116230949a975b47d0f7368e5ed65af 300 Gene3D G3DSA:3.40.1190.20 3 296 3.5E-52 T 19-04-2016 IPR029056 Ribokinase-like ALIDE2_RS19005 7116230949a975b47d0f7368e5ed65af 300 Pfam PF00294 pfkB family carbohydrate kinase 36 292 5.3E-41 T 19-04-2016 IPR011611 Carbohydrate kinase PfkB ALIDE2_RS19005 7116230949a975b47d0f7368e5ed65af 300 PANTHER PTHR10584:SF15 1 297 3.7E-91 T 19-04-2016 ALIDE2_RS19005 7116230949a975b47d0f7368e5ed65af 300 PANTHER PTHR10584 1 297 3.7E-91 T 19-04-2016 ALIDE2_RS19005 7116230949a975b47d0f7368e5ed65af 300 SUPERFAMILY SSF53613 3 292 4.99E-63 T 19-04-2016 IPR029056 Ribokinase-like ALIDE2_RS19005 7116230949a975b47d0f7368e5ed65af 300 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 19-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ALIDE2_RS15020 a2f5a8ad93c16e283f347acf7a7023ad 267 SMART SM00331 20 248 8.4E-18 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ALIDE2_RS15020 a2f5a8ad93c16e283f347acf7a7023ad 267 Gene3D G3DSA:3.60.40.10 6 248 4.2E-50 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ALIDE2_RS15020 a2f5a8ad93c16e283f347acf7a7023ad 267 PANTHER PTHR13832 4 266 3.1E-28 T 19-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 ALIDE2_RS15020 a2f5a8ad93c16e283f347acf7a7023ad 267 SUPERFAMILY SSF81606 6 248 3.27E-48 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ALIDE2_RS15020 a2f5a8ad93c16e283f347acf7a7023ad 267 Pfam PF13672 Protein phosphatase 2C 14 217 8.0E-12 T 19-04-2016 ALIDE2_RS15020 a2f5a8ad93c16e283f347acf7a7023ad 267 SMART SM00332 3 246 4.2E-6 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ALIDE2_RS15020 a2f5a8ad93c16e283f347acf7a7023ad 267 PANTHER PTHR13832:SF226 4 266 3.1E-28 T 19-04-2016 ALIDE2_RS08770 c5c3011b8e1a6a58ab82034aad56c984 203 Pfam PF11679 Protein of unknown function (DUF3275) 2 199 2.1E-92 T 19-04-2016 IPR021693 Protein of unknown function DUF3275 ALIDE2_RS01455 0af48d8adc048cf9ff5307445839315e 305 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 220 236 - T 19-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ALIDE2_RS01455 0af48d8adc048cf9ff5307445839315e 305 PANTHER PTHR10996 2 304 1.8E-88 T 19-04-2016 ALIDE2_RS01455 0af48d8adc048cf9ff5307445839315e 305 Gene3D G3DSA:3.40.50.720 116 284 2.5E-57 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS01455 0af48d8adc048cf9ff5307445839315e 305 SUPERFAMILY SSF52283 5 134 3.61E-23 T 19-04-2016 ALIDE2_RS01455 0af48d8adc048cf9ff5307445839315e 305 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 19-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ALIDE2_RS01455 0af48d8adc048cf9ff5307445839315e 305 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 304 1.7E-20 T 19-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS01455 0af48d8adc048cf9ff5307445839315e 305 Gene3D G3DSA:3.40.50.720 4 115 6.8E-23 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS01455 0af48d8adc048cf9ff5307445839315e 305 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 281 1.4E-53 T 19-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ALIDE2_RS01455 0af48d8adc048cf9ff5307445839315e 305 SUPERFAMILY SSF51735 100 282 2.86E-52 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11875 d0f8ed55cc197f529446749ab5cabf7c 207 PANTHER PTHR35561 22 201 2.2E-18 T 19-04-2016 ALIDE2_RS11875 d0f8ed55cc197f529446749ab5cabf7c 207 SUPERFAMILY SSF55144 21 200 5.06E-22 T 19-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase ALIDE2_RS11875 d0f8ed55cc197f529446749ab5cabf7c 207 Gene3D G3DSA:3.90.1140.10 21 201 1.7E-27 T 19-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase ALIDE2_RS11875 d0f8ed55cc197f529446749ab5cabf7c 207 Pfam PF13563 2'-5' RNA ligase superfamily 40 183 2.0E-8 T 19-04-2016 ALIDE2_RS18910 37bf338af6f7a0495d33e476bca5ff32 282 PANTHER PTHR21089 6 279 3.4E-112 T 19-04-2016 ALIDE2_RS18910 37bf338af6f7a0495d33e476bca5ff32 282 Gene3D G3DSA:3.40.192.10 3 109 3.5E-33 T 19-04-2016 ALIDE2_RS18910 37bf338af6f7a0495d33e476bca5ff32 282 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 7 278 8.4E-74 T 19-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS18910 37bf338af6f7a0495d33e476bca5ff32 282 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 121 200 6.2E-11 T 19-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ALIDE2_RS18910 37bf338af6f7a0495d33e476bca5ff32 282 SUPERFAMILY SSF53223 3 104 5.47E-28 T 19-04-2016 ALIDE2_RS18910 37bf338af6f7a0495d33e476bca5ff32 282 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 277 29.192 T 19-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS18910 37bf338af6f7a0495d33e476bca5ff32 282 SUPERFAMILY SSF51735 105 276 6.3E-39 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS18910 37bf338af6f7a0495d33e476bca5ff32 282 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 2.8E-20 T 19-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS18910 37bf338af6f7a0495d33e476bca5ff32 282 PANTHER PTHR21089:SF2 6 279 3.4E-112 T 19-04-2016 ALIDE2_RS18910 37bf338af6f7a0495d33e476bca5ff32 282 Gene3D G3DSA:3.40.50.720 110 278 3.1E-41 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS17835 9f3e71ba7874a502443acf41962020d0 244 SUPERFAMILY SSF161098 18 226 1.09E-28 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17835 9f3e71ba7874a502443acf41962020d0 244 PANTHER PTHR30183:SF4 1 227 8.2E-78 T 19-04-2016 ALIDE2_RS17835 9f3e71ba7874a502443acf41962020d0 244 Gene3D G3DSA:1.10.3720.10 19 231 4.4E-23 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17835 9f3e71ba7874a502443acf41962020d0 244 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 228 7.7E-7 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17835 9f3e71ba7874a502443acf41962020d0 244 PANTHER PTHR30183 1 227 8.2E-78 T 19-04-2016 ALIDE2_RS23350 83fb62284a3d207b5ae5f06e906b74a7 371 Gene3D G3DSA:3.30.200.20 26 117 1.4E-31 T 19-04-2016 ALIDE2_RS23350 83fb62284a3d207b5ae5f06e906b74a7 371 Pfam PF01636 Phosphotransferase enzyme family 48 275 6.9E-31 T 19-04-2016 IPR002575 Aminoglycoside phosphotransferase ALIDE2_RS23350 83fb62284a3d207b5ae5f06e906b74a7 371 SUPERFAMILY SSF56112 33 345 3.74E-52 T 19-04-2016 IPR011009 Protein kinase-like domain ALIDE2_RS23350 83fb62284a3d207b5ae5f06e906b74a7 371 Gene3D G3DSA:3.90.1200.10 119 357 5.2E-73 T 19-04-2016 ALIDE2_RS23350 83fb62284a3d207b5ae5f06e906b74a7 371 PANTHER PTHR33540:SF1 37 364 5.4E-93 T 19-04-2016 ALIDE2_RS23350 83fb62284a3d207b5ae5f06e906b74a7 371 PANTHER PTHR33540 37 364 5.4E-93 T 19-04-2016 ALIDE2_RS20540 12b8fac5986bf672dc8ca327e38c1752 259 PANTHER PTHR11941 13 257 1.9E-101 T 19-04-2016 ALIDE2_RS20540 12b8fac5986bf672dc8ca327e38c1752 259 Gene3D G3DSA:3.90.226.10 4 200 2.7E-59 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS20540 12b8fac5986bf672dc8ca327e38c1752 259 SUPERFAMILY SSF52096 3 257 2.02E-76 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS20540 12b8fac5986bf672dc8ca327e38c1752 259 Gene3D G3DSA:1.10.12.10 202 257 1.7E-11 T 19-04-2016 IPR014748 Crontonase, C-terminal ALIDE2_RS20540 12b8fac5986bf672dc8ca327e38c1752 259 PANTHER PTHR11941:SF86 13 257 1.9E-101 T 19-04-2016 ALIDE2_RS20540 12b8fac5986bf672dc8ca327e38c1752 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 257 8.7E-53 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS02955 ac3e32f9b2a1c847ecdcb0cb174be235 334 Gene3D G3DSA:3.40.50.970 1 209 3.4E-81 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS02955 ac3e32f9b2a1c847ecdcb0cb174be235 334 PANTHER PTHR11624 1 333 5.9E-236 T 19-04-2016 IPR033247 Transketolase family ALIDE2_RS02955 ac3e32f9b2a1c847ecdcb0cb174be235 334 Pfam PF02779 Transketolase, pyrimidine binding domain 1 175 5.7E-45 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ALIDE2_RS02955 ac3e32f9b2a1c847ecdcb0cb174be235 334 SMART SM00861 1 176 2.8E-69 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ALIDE2_RS02955 ac3e32f9b2a1c847ecdcb0cb174be235 334 SUPERFAMILY SSF52518 1 179 9.32E-68 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS02955 ac3e32f9b2a1c847ecdcb0cb174be235 334 PANTHER PTHR11624:SF55 1 333 5.9E-236 T 19-04-2016 ALIDE2_RS02955 ac3e32f9b2a1c847ecdcb0cb174be235 334 Gene3D G3DSA:3.40.50.920 211 329 1.4E-43 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS02955 ac3e32f9b2a1c847ecdcb0cb174be235 334 Pfam PF02780 Transketolase, C-terminal domain 208 324 2.5E-34 T 19-04-2016 IPR033248 Transketolase, C-terminal domain ALIDE2_RS02955 ac3e32f9b2a1c847ecdcb0cb174be235 334 SUPERFAMILY SSF52922 202 332 1.7E-41 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS02980 247f317cbf9c85ccdf0cc0deba7b5fff 191 PANTHER PTHR23133 2 175 2.3E-43 T 19-04-2016 ALIDE2_RS02980 247f317cbf9c85ccdf0cc0deba7b5fff 191 SUPERFAMILY SSF56784 1 156 1.18E-38 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS02980 247f317cbf9c85ccdf0cc0deba7b5fff 191 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 2 140 1.3E-25 T 19-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA ALIDE2_RS02980 247f317cbf9c85ccdf0cc0deba7b5fff 191 PANTHER PTHR23133:SF7 2 175 2.3E-43 T 19-04-2016 ALIDE2_RS02980 247f317cbf9c85ccdf0cc0deba7b5fff 191 Gene3D G3DSA:3.40.50.1000 1 153 1.7E-43 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS02980 247f317cbf9c85ccdf0cc0deba7b5fff 191 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 142 1.6E-35 T 19-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 ALIDE2_RS02980 247f317cbf9c85ccdf0cc0deba7b5fff 191 Pfam PF08645 Polynucleotide kinase 3 phosphatase 2 114 2.0E-6 T 19-04-2016 IPR013954 Polynucleotide kinase 3 phosphatase ALIDE2_RS23020 c097f1bb93359e48f1f3836671c9879b 70 Gene3D G3DSA:2.40.50.100 2 69 4.7E-20 T 19-04-2016 ALIDE2_RS23020 c097f1bb93359e48f1f3836671c9879b 70 Pfam PF00364 Biotin-requiring enzyme 4 69 7.7E-15 T 19-04-2016 IPR000089 Biotin/lipoyl attachment ALIDE2_RS23020 c097f1bb93359e48f1f3836671c9879b 70 SUPERFAMILY SSF51230 2 69 3.8E-17 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS01835 b178aeadf37af87427a105e79168efc8 136 Gene3D G3DSA:3.40.50.510 2 133 2.5E-34 T 19-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 ALIDE2_RS01835 b178aeadf37af87427a105e79168efc8 136 Pfam PF03610 PTS system fructose IIA component 5 106 7.3E-15 T 19-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 ALIDE2_RS01835 b178aeadf37af87427a105e79168efc8 136 SUPERFAMILY SSF53062 2 126 3.01E-28 T 19-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 ALIDE2_RS01835 b178aeadf37af87427a105e79168efc8 136 PANTHER PTHR33799 3 129 1.2E-13 T 19-04-2016 ALIDE2_RS19605 5c1442283e1672cb37a055f075deafee 207 SUPERFAMILY SSF110111 66 184 7.45E-47 T 19-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain ALIDE2_RS19605 5c1442283e1672cb37a055f075deafee 207 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 182 1.3E-48 T 19-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 ALIDE2_RS19605 5c1442283e1672cb37a055f075deafee 207 Gene3D G3DSA:2.60.370.10 66 190 1.6E-49 T 19-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain ALIDE2_RS19605 5c1442283e1672cb37a055f075deafee 207 PANTHER PTHR21320 4 183 6.0E-38 T 19-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 ALIDE2_RS19605 5c1442283e1672cb37a055f075deafee 207 PANTHER PTHR21320:SF3 4 183 6.0E-38 T 19-04-2016 ALIDE2_RS19605 5c1442283e1672cb37a055f075deafee 207 PIRSF PIRSF005413 3 201 6.5E-57 T 19-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 ALIDE2_RS11050 19ff4d2ca5dd644ee54eda649cc806b1 297 PANTHER PTHR30346:SF4 1 297 2.5E-86 T 19-04-2016 ALIDE2_RS11050 19ff4d2ca5dd644ee54eda649cc806b1 297 Gene3D G3DSA:3.40.190.10 88 174 3.7E-28 T 19-04-2016 ALIDE2_RS11050 19ff4d2ca5dd644ee54eda649cc806b1 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11050 19ff4d2ca5dd644ee54eda649cc806b1 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11050 19ff4d2ca5dd644ee54eda649cc806b1 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11050 19ff4d2ca5dd644ee54eda649cc806b1 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.5E-21 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11050 19ff4d2ca5dd644ee54eda649cc806b1 297 PANTHER PTHR30346 1 297 2.5E-86 T 19-04-2016 ALIDE2_RS11050 19ff4d2ca5dd644ee54eda649cc806b1 297 SUPERFAMILY SSF53850 87 293 5.43E-39 T 19-04-2016 ALIDE2_RS11050 19ff4d2ca5dd644ee54eda649cc806b1 297 Gene3D G3DSA:3.40.190.10 175 266 2.7E-28 T 19-04-2016 ALIDE2_RS11050 19ff4d2ca5dd644ee54eda649cc806b1 297 Gene3D G3DSA:1.10.10.10 1 87 1.1E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11050 19ff4d2ca5dd644ee54eda649cc806b1 297 SUPERFAMILY SSF46785 1 87 1.16E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11050 19ff4d2ca5dd644ee54eda649cc806b1 297 Pfam PF03466 LysR substrate binding domain 87 292 6.8E-41 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS22965 a03d015b6a7cd51fb939bcc7978c0acf 329 PANTHER PTHR30349 8 295 2.6E-81 T 19-04-2016 ALIDE2_RS22965 a03d015b6a7cd51fb939bcc7978c0acf 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 323 3.9E-79 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22965 a03d015b6a7cd51fb939bcc7978c0acf 329 PIRSF PIRSF017082 2 329 9.2E-70 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22965 a03d015b6a7cd51fb939bcc7978c0acf 329 PANTHER PTHR30349:SF1 8 295 2.6E-81 T 19-04-2016 ALIDE2_RS22965 a03d015b6a7cd51fb939bcc7978c0acf 329 SUPERFAMILY SSF53850 81 294 1.43E-12 T 19-04-2016 ALIDE2_RS11840 dd37115cb4e1d545b374a7f6d22e09d1 225 Pfam PF00849 RNA pseudouridylate synthase 22 176 3.9E-30 T 19-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS11840 dd37115cb4e1d545b374a7f6d22e09d1 225 PANTHER PTHR11079:SF86 16 224 4.1E-46 T 19-04-2016 ALIDE2_RS11840 dd37115cb4e1d545b374a7f6d22e09d1 225 SUPERFAMILY SSF55120 9 224 1.38E-57 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS11840 dd37115cb4e1d545b374a7f6d22e09d1 225 PANTHER PTHR11079 16 224 4.1E-46 T 19-04-2016 ALIDE2_RS11840 dd37115cb4e1d545b374a7f6d22e09d1 225 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 59 73 - T 19-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS11500 ab37c6f4fef64ae12b3fdbe8468d5ed7 356 SMART SM00028 62 95 150.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS11500 ab37c6f4fef64ae12b3fdbe8468d5ed7 356 SMART SM00028 130 158 410.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS11500 ab37c6f4fef64ae12b3fdbe8468d5ed7 356 SMART SM00028 96 129 3.0E-4 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS11500 ab37c6f4fef64ae12b3fdbe8468d5ed7 356 Gene3D G3DSA:1.25.40.10 38 105 6.9E-11 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS11500 ab37c6f4fef64ae12b3fdbe8468d5ed7 356 Pfam PF13414 TPR repeat 106 143 1.9E-7 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS11500 ab37c6f4fef64ae12b3fdbe8468d5ed7 356 Pfam PF13432 Tetratricopeptide repeat 38 93 3.5E-5 T 19-04-2016 ALIDE2_RS11500 ab37c6f4fef64ae12b3fdbe8468d5ed7 356 PANTHER PTHR23083 38 163 7.3E-17 T 19-04-2016 ALIDE2_RS11500 ab37c6f4fef64ae12b3fdbe8468d5ed7 356 SUPERFAMILY SSF54427 246 352 1.13E-15 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS11500 ab37c6f4fef64ae12b3fdbe8468d5ed7 356 SUPERFAMILY SSF48452 38 159 6.58E-22 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS11500 ab37c6f4fef64ae12b3fdbe8468d5ed7 356 Gene3D G3DSA:1.25.40.10 106 162 5.5E-13 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS11500 ab37c6f4fef64ae12b3fdbe8468d5ed7 356 Gene3D G3DSA:3.10.450.50 245 352 3.4E-8 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS03935 45f193d7af37573048770a980fa636ee 213 Pfam PF01794 Ferric reductase like transmembrane component 65 171 3.3E-15 T 19-04-2016 IPR013130 Ferric reductase transmembrane component-like domain ALIDE2_RS03935 45f193d7af37573048770a980fa636ee 213 PANTHER PTHR36964 9 211 7.3E-48 T 19-04-2016 ALIDE2_RS03935 45f193d7af37573048770a980fa636ee 213 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 11 212 24.6 T 19-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 ALIDE2_RS20445 2b6ed1e5f28fb7fc3982b69e33714549 349 PIRSF PIRSF001237 6 349 2.6E-138 T 19-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS20445 2b6ed1e5f28fb7fc3982b69e33714549 349 ProSitePatterns PS00482 Dihydroorotase signature 1. 17 25 - T 19-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS20445 2b6ed1e5f28fb7fc3982b69e33714549 349 ProSitePatterns PS00483 Dihydroorotase signature 2. 250 261 - T 19-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS20445 2b6ed1e5f28fb7fc3982b69e33714549 349 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 10 347 2.4E-138 T 19-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS20445 2b6ed1e5f28fb7fc3982b69e33714549 349 Pfam PF01979 Amidohydrolase family 17 315 5.0E-18 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 ALIDE2_RS20445 2b6ed1e5f28fb7fc3982b69e33714549 349 Gene3D G3DSA:3.20.20.140 8 347 3.8E-133 T 19-04-2016 ALIDE2_RS20445 2b6ed1e5f28fb7fc3982b69e33714549 349 PANTHER PTHR11647 8 321 1.4E-163 T 19-04-2016 ALIDE2_RS20445 2b6ed1e5f28fb7fc3982b69e33714549 349 SUPERFAMILY SSF51556 8 347 1.08E-144 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS20445 2b6ed1e5f28fb7fc3982b69e33714549 349 Hamap MF_00219 Dihydroorotase [pyrC]. 8 348 43.685 T 19-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS20445 2b6ed1e5f28fb7fc3982b69e33714549 349 PANTHER PTHR11647:SF59 8 321 1.4E-163 T 19-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS17855 fdcfb12037716f074314e05621226947 641 SMART SM00493 259 330 1.5E-13 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS17855 fdcfb12037716f074314e05621226947 641 Pfam PF13662 Toprim domain 261 323 8.5E-15 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS17855 fdcfb12037716f074314e05621226947 641 Gene3D G3DSA:3.90.580.10 3 99 3.4E-41 T 19-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ALIDE2_RS17855 fdcfb12037716f074314e05621226947 641 Gene3D G3DSA:1.20.50.20 368 424 3.7E-19 T 19-04-2016 ALIDE2_RS17855 fdcfb12037716f074314e05621226947 641 Hamap MF_00974 DNA primase [dnaG]. 2 635 27.201 T 19-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 ALIDE2_RS17855 fdcfb12037716f074314e05621226947 641 Pfam PF08275 DNA primase catalytic core, N-terminal domain 136 252 1.0E-36 T 19-04-2016 IPR013264 DNA primase, catalytic core, N-terminal ALIDE2_RS17855 fdcfb12037716f074314e05621226947 641 Gene3D G3DSA:3.90.980.10 119 240 2.7E-38 T 19-04-2016 IPR013264 DNA primase, catalytic core, N-terminal ALIDE2_RS17855 fdcfb12037716f074314e05621226947 641 Gene3D G3DSA:3.40.1360.10 241 366 3.6E-42 T 19-04-2016 ALIDE2_RS17855 fdcfb12037716f074314e05621226947 641 Pfam PF10410 DnaB-helicase binding domain of primase 369 417 1.5E-10 T 19-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 ALIDE2_RS17855 fdcfb12037716f074314e05621226947 641 PANTHER PTHR30313 1 433 4.1E-140 T 19-04-2016 ALIDE2_RS17855 fdcfb12037716f074314e05621226947 641 SMART SM00400 34 88 5.3E-33 T 19-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ALIDE2_RS17855 fdcfb12037716f074314e05621226947 641 TIGRFAM TIGR01391 dnaG: DNA primase 3 416 9.7E-135 T 19-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 ALIDE2_RS17855 fdcfb12037716f074314e05621226947 641 SUPERFAMILY SSF56731 119 418 3.4E-99 T 19-04-2016 ALIDE2_RS17855 fdcfb12037716f074314e05621226947 641 SUPERFAMILY SSF57783 3 97 9.35E-37 T 19-04-2016 ALIDE2_RS17855 fdcfb12037716f074314e05621226947 641 Pfam PF01807 CHC2 zinc finger 4 98 6.5E-39 T 19-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ALIDE2_RS13010 7c414e4e89c112d867a5ec0e359021d3 115 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 91 109 - T 19-04-2016 IPR019897 RidA, conserved site ALIDE2_RS13010 7c414e4e89c112d867a5ec0e359021d3 115 SUPERFAMILY SSF55298 1 114 8.8E-34 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ALIDE2_RS13010 7c414e4e89c112d867a5ec0e359021d3 115 PANTHER PTHR11803 1 115 5.3E-35 T 19-04-2016 IPR006175 YjgF/YER057c/UK114 family ALIDE2_RS13010 7c414e4e89c112d867a5ec0e359021d3 115 Pfam PF01042 Endoribonuclease L-PSP 3 114 1.7E-27 T 19-04-2016 IPR006175 YjgF/YER057c/UK114 family ALIDE2_RS13010 7c414e4e89c112d867a5ec0e359021d3 115 Gene3D G3DSA:3.30.1330.40 9 114 3.5E-28 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ALIDE2_RS23045 275ac99f3b0ced7c462c9ca3ff7a7b8d 154 Pfam PF03061 Thioesterase superfamily 62 133 1.1E-13 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS23045 275ac99f3b0ced7c462c9ca3ff7a7b8d 154 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 50 139 8.8E-11 T 19-04-2016 IPR003736 Phenylacetic acid degradation-related domain ALIDE2_RS23045 275ac99f3b0ced7c462c9ca3ff7a7b8d 154 PANTHER PTHR12418 31 135 9.3E-16 T 19-04-2016 ALIDE2_RS23045 275ac99f3b0ced7c462c9ca3ff7a7b8d 154 SUPERFAMILY SSF54637 17 149 1.45E-25 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS23045 275ac99f3b0ced7c462c9ca3ff7a7b8d 154 Gene3D G3DSA:3.10.129.10 15 147 1.4E-39 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS15835 b7fb991793a3f6436f452ddfc54be968 331 PANTHER PTHR11669:SF8 109 222 1.2E-44 T 19-04-2016 ALIDE2_RS15835 b7fb991793a3f6436f452ddfc54be968 331 PANTHER PTHR11669:SF8 13 82 1.2E-44 T 19-04-2016 ALIDE2_RS15835 b7fb991793a3f6436f452ddfc54be968 331 SUPERFAMILY SSF52540 18 224 1.0E-38 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15835 b7fb991793a3f6436f452ddfc54be968 331 Pfam PF13177 DNA polymerase III, delta subunit 20 179 9.4E-35 T 19-04-2016 ALIDE2_RS15835 b7fb991793a3f6436f452ddfc54be968 331 Gene3D G3DSA:3.40.50.300 19 181 1.4E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15835 b7fb991793a3f6436f452ddfc54be968 331 PANTHER PTHR11669 109 222 1.2E-44 T 19-04-2016 ALIDE2_RS15835 b7fb991793a3f6436f452ddfc54be968 331 PANTHER PTHR11669 13 82 1.2E-44 T 19-04-2016 ALIDE2_RS11015 1cf402fcc88e5f0474b95c7e1c505e93 143 PIRSF PIRSF000178 1 140 1.4E-25 T 19-04-2016 ALIDE2_RS11015 1cf402fcc88e5f0474b95c7e1c505e93 143 PANTHER PTHR10978 19 136 7.1E-20 T 19-04-2016 ALIDE2_RS11015 1cf402fcc88e5f0474b95c7e1c505e93 143 PANTHER PTHR10978:SF4 19 136 7.1E-20 T 19-04-2016 ALIDE2_RS11015 1cf402fcc88e5f0474b95c7e1c505e93 143 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 136 1.3E-28 T 19-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 ALIDE2_RS11015 1cf402fcc88e5f0474b95c7e1c505e93 143 SUPERFAMILY SSF81343 19 139 8.5E-23 T 19-04-2016 ALIDE2_RS11015 1cf402fcc88e5f0474b95c7e1c505e93 143 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 16 135 7.7E-24 T 19-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 ALIDE2_RS11015 1cf402fcc88e5f0474b95c7e1c505e93 143 Gene3D G3DSA:1.20.1300.10 5 140 1.4E-33 T 19-04-2016 ALIDE2_RS07935 873e58939e81a0e9acbad4e6b60076e0 230 Gene3D G3DSA:1.10.357.10 57 211 1.8E-22 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS07935 873e58939e81a0e9acbad4e6b60076e0 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 6.6E-7 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS07935 873e58939e81a0e9acbad4e6b60076e0 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 6.6E-7 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS07935 873e58939e81a0e9acbad4e6b60076e0 230 SUPERFAMILY SSF46689 6 77 9.23E-17 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS07935 873e58939e81a0e9acbad4e6b60076e0 230 PANTHER PTHR30055:SF73 1 127 1.0E-25 T 19-04-2016 ALIDE2_RS07935 873e58939e81a0e9acbad4e6b60076e0 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 6.4E-11 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS07935 873e58939e81a0e9acbad4e6b60076e0 230 PANTHER PTHR30055 1 127 1.0E-25 T 19-04-2016 ALIDE2_RS07935 873e58939e81a0e9acbad4e6b60076e0 230 Pfam PF09209 Domain of unknown function (DUF1956) 90 206 3.2E-19 T 19-04-2016 IPR015292 Transcription regulator YbiH, C-terminal ALIDE2_RS07935 873e58939e81a0e9acbad4e6b60076e0 230 SUPERFAMILY SSF48498 85 211 8.45E-31 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS07935 873e58939e81a0e9acbad4e6b60076e0 230 Gene3D G3DSA:1.10.10.60 9 56 2.2E-19 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 SUPERFAMILY SSF52935 328 476 1.44E-38 T 19-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 Gene3D G3DSA:2.40.33.10 76 169 6.4E-27 T 19-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 Gene3D G3DSA:3.40.1380.20 332 474 3.0E-41 T 19-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 PANTHER PTHR11817 2 474 9.8E-230 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 474 1.9E-155 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 SUPERFAMILY SSF50800 73 166 6.8E-24 T 19-04-2016 IPR011037 Pyruvate kinase-like, insert domain ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 SUPERFAMILY SSF51621 3 78 6.28E-91 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 SUPERFAMILY SSF51621 169 343 6.28E-91 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 Pfam PF00224 Pyruvate kinase, barrel domain 5 343 1.8E-118 T 19-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 PANTHER PTHR11817:SF17 2 474 9.8E-230 T 19-04-2016 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 474 1.1E-30 T 19-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 Gene3D G3DSA:3.20.20.60 170 331 1.8E-96 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 Gene3D G3DSA:3.20.20.60 5 75 1.8E-96 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 PRINTS PR01050 Pyruvate kinase family signature 274 298 2.6E-59 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 PRINTS PR01050 Pyruvate kinase family signature 62 78 2.6E-59 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 PRINTS PR01050 Pyruvate kinase family signature 249 273 2.6E-59 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 PRINTS PR01050 Pyruvate kinase family signature 299 317 2.6E-59 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 PRINTS PR01050 Pyruvate kinase family signature 188 202 2.6E-59 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 PRINTS PR01050 Pyruvate kinase family signature 222 248 2.6E-59 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS22320 f96616f4165af14117d712685f0760ca 478 PRINTS PR01050 Pyruvate kinase family signature 318 334 2.6E-59 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS12640 54a4163742ef7a943205ada19e5f4ebf 153 SUPERFAMILY SSF54909 64 144 3.35E-22 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel ALIDE2_RS12640 54a4163742ef7a943205ada19e5f4ebf 153 SMART SM00344 1 110 7.2E-48 T 19-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ALIDE2_RS12640 54a4163742ef7a943205ada19e5f4ebf 153 Gene3D G3DSA:1.10.10.10 1 52 4.0E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12640 54a4163742ef7a943205ada19e5f4ebf 153 Gene3D G3DSA:3.30.70.920 53 145 1.1E-30 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ALIDE2_RS12640 54a4163742ef7a943205ada19e5f4ebf 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 19-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ALIDE2_RS12640 54a4163742ef7a943205ada19e5f4ebf 153 Pfam PF01037 Lrp/AsnC ligand binding domain 67 141 1.3E-26 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ALIDE2_RS12640 54a4163742ef7a943205ada19e5f4ebf 153 PANTHER PTHR30154 1 149 3.6E-58 T 19-04-2016 ALIDE2_RS12640 54a4163742ef7a943205ada19e5f4ebf 153 SUPERFAMILY SSF46785 1 59 3.21E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12640 54a4163742ef7a943205ada19e5f4ebf 153 PANTHER PTHR30154:SF28 1 149 3.6E-58 T 19-04-2016 ALIDE2_RS12640 54a4163742ef7a943205ada19e5f4ebf 153 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.3E-18 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS12640 54a4163742ef7a943205ada19e5f4ebf 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.3E-16 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS12640 54a4163742ef7a943205ada19e5f4ebf 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.3E-16 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS12640 54a4163742ef7a943205ada19e5f4ebf 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.3E-16 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS15010 e4a4852c794778e46113d0e6f3b4f5a4 265 SUPERFAMILY SSF48452 37 111 3.61E-6 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS15010 e4a4852c794778e46113d0e6f3b4f5a4 265 PANTHER PTHR37423 8 247 1.8E-65 T 19-04-2016 ALIDE2_RS15010 e4a4852c794778e46113d0e6f3b4f5a4 265 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 2 245 43.321 T 19-04-2016 IPR017689 Outer membrane protein assembly factor BamD ALIDE2_RS15010 e4a4852c794778e46113d0e6f3b4f5a4 265 Gene3D G3DSA:1.25.40.10 35 230 7.8E-6 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS15010 e4a4852c794778e46113d0e6f3b4f5a4 265 Pfam PF13525 Outer membrane lipoprotein 35 238 1.0E-57 T 19-04-2016 ALIDE2_RS15010 e4a4852c794778e46113d0e6f3b4f5a4 265 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 8 249 7.7E-84 T 19-04-2016 IPR017689 Outer membrane protein assembly factor BamD ALIDE2_RS12365 8f6dbb97a22abb59df8b0932d24ee122 713 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 372 397 - T 19-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 ALIDE2_RS12365 8f6dbb97a22abb59df8b0932d24ee122 713 SUPERFAMILY SSF52242 550 709 2.22E-57 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 ALIDE2_RS12365 8f6dbb97a22abb59df8b0932d24ee122 713 SUPERFAMILY SSF51703 5 545 1.88E-226 T 19-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 ALIDE2_RS12365 8f6dbb97a22abb59df8b0932d24ee122 713 Gene3D G3DSA:3.20.20.240 29 496 3.2E-214 T 19-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 ALIDE2_RS12365 8f6dbb97a22abb59df8b0932d24ee122 713 Gene3D G3DSA:3.40.50.280 550 710 4.7E-70 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 ALIDE2_RS12365 8f6dbb97a22abb59df8b0932d24ee122 713 PANTHER PTHR23408 9 689 0.0 T 19-04-2016 ALIDE2_RS12365 8f6dbb97a22abb59df8b0932d24ee122 713 PANTHER PTHR23408:SF1 9 689 0.0 T 19-04-2016 ALIDE2_RS12365 8f6dbb97a22abb59df8b0932d24ee122 713 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 29 550 1.3E-268 T 19-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 ALIDE2_RS12365 8f6dbb97a22abb59df8b0932d24ee122 713 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 582 711 2.8E-59 T 19-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 ALIDE2_RS12365 8f6dbb97a22abb59df8b0932d24ee122 713 Pfam PF02310 B12 binding domain 585 694 5.2E-16 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 ALIDE2_RS12365 8f6dbb97a22abb59df8b0932d24ee122 713 Pfam PF01642 Methylmalonyl-CoA mutase 30 543 2.4E-241 T 19-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 ALIDE2_RS06250 952fa421cba40636ac1715347e57e4e0 223 SUPERFAMILY SSF56784 8 221 2.29E-56 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS06250 952fa421cba40636ac1715347e57e4e0 223 Gene3D G3DSA:1.10.150.240 27 79 1.2E-7 T 19-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 ALIDE2_RS06250 952fa421cba40636ac1715347e57e4e0 223 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 105 184 7.9E-9 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS06250 952fa421cba40636ac1715347e57e4e0 223 PANTHER PTHR18901:SF40 8 219 2.3E-49 T 19-04-2016 ALIDE2_RS06250 952fa421cba40636ac1715347e57e4e0 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 90 190 1.9E-10 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS06250 952fa421cba40636ac1715347e57e4e0 223 PANTHER PTHR18901 8 219 2.3E-49 T 19-04-2016 ALIDE2_RS06250 952fa421cba40636ac1715347e57e4e0 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 1.9E-28 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS06250 952fa421cba40636ac1715347e57e4e0 223 Gene3D G3DSA:3.40.50.1000 80 221 9.0E-42 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS20370 2effd066483975865fa50ed755f56501 331 SUPERFAMILY SSF53850 116 291 2.61E-10 T 19-04-2016 ALIDE2_RS20370 2effd066483975865fa50ed755f56501 331 PIRSF PIRSF017082 1 330 2.8E-71 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS20370 2effd066483975865fa50ed755f56501 331 PANTHER PTHR30349:SF32 8 329 7.4E-82 T 19-04-2016 ALIDE2_RS20370 2effd066483975865fa50ed755f56501 331 PANTHER PTHR30349 8 329 7.4E-82 T 19-04-2016 ALIDE2_RS20370 2effd066483975865fa50ed755f56501 331 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 327 3.6E-78 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS02215 7326ac0671a144a3f8a7a215d3f631a8 305 Gene3D G3DSA:3.30.950.10 137 252 3.3E-29 T 19-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 ALIDE2_RS02215 7326ac0671a144a3f8a7a215d3f631a8 305 PANTHER PTHR21091 23 222 1.7E-67 T 19-04-2016 ALIDE2_RS02215 7326ac0671a144a3f8a7a215d3f631a8 305 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 26 299 9.3E-68 T 19-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS02215 7326ac0671a144a3f8a7a215d3f631a8 305 Gene3D G3DSA:3.40.1010.10 24 136 3.0E-13 T 19-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 ALIDE2_RS02215 7326ac0671a144a3f8a7a215d3f631a8 305 PANTHER PTHR21091:SF18 23 222 1.7E-67 T 19-04-2016 ALIDE2_RS02215 7326ac0671a144a3f8a7a215d3f631a8 305 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 25 224 6.4E-29 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 ALIDE2_RS02215 7326ac0671a144a3f8a7a215d3f631a8 305 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 106 117 - T 19-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS02215 7326ac0671a144a3f8a7a215d3f631a8 305 PIRSF PIRSF005917 13 304 5.2E-88 T 19-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS02215 7326ac0671a144a3f8a7a215d3f631a8 305 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 25 252 32.653 T 19-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS02215 7326ac0671a144a3f8a7a215d3f631a8 305 SUPERFAMILY SSF53790 23 250 6.94E-68 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 ALIDE2_RS03115 7ee7a88e0734ced011c394c53381f17b 274 Pfam PF01061 ABC-2 type transporter 27 230 8.4E-15 T 19-04-2016 IPR013525 ABC-2 type transporter GO:0016020 ALIDE2_RS03115 7ee7a88e0734ced011c394c53381f17b 274 PANTHER PTHR30413 30 274 1.9E-49 T 19-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ALIDE2_RS03115 7ee7a88e0734ced011c394c53381f17b 274 PANTHER PTHR30413:SF8 30 274 1.9E-49 T 19-04-2016 ALIDE2_RS11180 9c670b40a28be3fc9b0f643767aeb2fe 269 PANTHER PTHR23427:SF6 20 245 2.4E-55 T 19-04-2016 ALIDE2_RS11180 9c670b40a28be3fc9b0f643767aeb2fe 269 Pfam PF02104 SURF1 family 30 246 1.6E-39 T 19-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 ALIDE2_RS11180 9c670b40a28be3fc9b0f643767aeb2fe 269 PANTHER PTHR23427 20 245 2.4E-55 T 19-04-2016 ALIDE2_RS22480 b5265e55d4bccf7994c2a136c4a95a01 383 PANTHER PTHR18919 4 383 4.6E-64 T 19-04-2016 ALIDE2_RS22480 b5265e55d4bccf7994c2a136c4a95a01 383 PANTHER PTHR18919:SF108 4 383 4.6E-64 T 19-04-2016 ALIDE2_RS22480 b5265e55d4bccf7994c2a136c4a95a01 383 Gene3D G3DSA:3.40.47.10 240 356 7.3E-15 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS22480 b5265e55d4bccf7994c2a136c4a95a01 383 Gene3D G3DSA:3.40.47.10 145 184 7.3E-15 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS22480 b5265e55d4bccf7994c2a136c4a95a01 383 SUPERFAMILY SSF53901 228 356 2.88E-18 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS22480 b5265e55d4bccf7994c2a136c4a95a01 383 PIRSF PIRSF000429 3 381 3.9E-27 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS22480 b5265e55d4bccf7994c2a136c4a95a01 383 Gene3D G3DSA:3.40.47.10 17 113 4.5E-21 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS22480 b5265e55d4bccf7994c2a136c4a95a01 383 Gene3D G3DSA:3.40.47.10 195 225 4.5E-21 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS22480 b5265e55d4bccf7994c2a136c4a95a01 383 Pfam PF00108 Thiolase, N-terminal domain 14 223 6.3E-7 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS22480 b5265e55d4bccf7994c2a136c4a95a01 383 SUPERFAMILY SSF53901 7 223 4.76E-27 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS18985 2804c799638493d231b5cd5f4e47991c 152 Pfam PF00364 Biotin-requiring enzyme 78 151 2.9E-24 T 19-04-2016 IPR000089 Biotin/lipoyl attachment ALIDE2_RS18985 2804c799638493d231b5cd5f4e47991c 152 PANTHER PTHR23151 1 152 2.6E-42 T 19-04-2016 ALIDE2_RS18985 2804c799638493d231b5cd5f4e47991c 152 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 152 3.5E-55 T 19-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 ALIDE2_RS18985 2804c799638493d231b5cd5f4e47991c 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 113 126 2.2E-18 T 19-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 ALIDE2_RS18985 2804c799638493d231b5cd5f4e47991c 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 98 112 2.2E-18 T 19-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 ALIDE2_RS18985 2804c799638493d231b5cd5f4e47991c 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 81 94 2.2E-18 T 19-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 ALIDE2_RS18985 2804c799638493d231b5cd5f4e47991c 152 SUPERFAMILY SSF51230 77 152 2.88E-25 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS18985 2804c799638493d231b5cd5f4e47991c 152 Gene3D G3DSA:2.40.50.100 75 152 9.1E-33 T 19-04-2016 ALIDE2_RS07425 d7e8c38a9eaa8d604987df92c0c4238a 473 Gene3D G3DSA:3.30.1330.120 277 404 1.9E-8 T 19-04-2016 ALIDE2_RS07425 d7e8c38a9eaa8d604987df92c0c4238a 473 Pfam PF03972 MmgE/PrpD family 5 455 5.6E-82 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS07425 d7e8c38a9eaa8d604987df92c0c4238a 473 PANTHER PTHR16943 1 457 3.2E-44 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS07425 d7e8c38a9eaa8d604987df92c0c4238a 473 PANTHER PTHR16943:SF8 1 457 3.2E-44 T 19-04-2016 ALIDE2_RS07425 d7e8c38a9eaa8d604987df92c0c4238a 473 SUPERFAMILY SSF103378 1 462 5.36E-91 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS01310 e6bda339db5fb9b157c3047d4f853847 284 PANTHER PTHR22726 19 282 6.0E-62 T 19-04-2016 ALIDE2_RS01310 e6bda339db5fb9b157c3047d4f853847 284 Gene3D G3DSA:3.30.2010.10 106 171 1.3E-15 T 19-04-2016 ALIDE2_RS01310 e6bda339db5fb9b157c3047d4f853847 284 Pfam PF01435 Peptidase family M48 108 269 7.5E-34 T 19-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ALIDE2_RS01130 21e2df83dee3a384aeb051a3f0fc40b6 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 319 2.7E-86 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01130 21e2df83dee3a384aeb051a3f0fc40b6 324 PANTHER PTHR30349 1 323 1.7E-89 T 19-04-2016 ALIDE2_RS01130 21e2df83dee3a384aeb051a3f0fc40b6 324 PIRSF PIRSF017082 1 323 1.2E-85 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01130 21e2df83dee3a384aeb051a3f0fc40b6 324 SUPERFAMILY SSF53850 114 278 2.75E-12 T 19-04-2016 ALIDE2_RS01130 21e2df83dee3a384aeb051a3f0fc40b6 324 PANTHER PTHR30349:SF16 1 323 1.7E-89 T 19-04-2016 ALIDE2_RS07065 7788ace93c1acd690f26aec3f09d5067 392 PANTHER PTHR10229 14 379 2.3E-148 T 19-04-2016 IPR016496 GTPase HflX GO:0005525 ALIDE2_RS07065 7788ace93c1acd690f26aec3f09d5067 392 SUPERFAMILY SSF52540 202 373 4.8E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07065 7788ace93c1acd690f26aec3f09d5067 392 Pfam PF13167 GTP-binding GTPase N-terminal 28 115 8.7E-28 T 19-04-2016 IPR025121 GTPase HflX, N-terminal ALIDE2_RS07065 7788ace93c1acd690f26aec3f09d5067 392 Hamap MF_00900 GTPase HflX [hflX]. 30 387 43.063 T 19-04-2016 IPR016496 GTPase HflX GO:0005525 ALIDE2_RS07065 7788ace93c1acd690f26aec3f09d5067 392 PANTHER PTHR10229:SF0 14 379 2.3E-148 T 19-04-2016 ALIDE2_RS07065 7788ace93c1acd690f26aec3f09d5067 392 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 14 370 3.2E-140 T 19-04-2016 IPR016496 GTPase HflX GO:0005525 ALIDE2_RS07065 7788ace93c1acd690f26aec3f09d5067 392 Pfam PF01926 50S ribosome-binding GTPase 204 323 8.6E-21 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS07065 7788ace93c1acd690f26aec3f09d5067 392 PIRSF PIRSF006809 7 383 7.9E-131 T 19-04-2016 IPR016496 GTPase HflX GO:0005525 ALIDE2_RS07065 7788ace93c1acd690f26aec3f09d5067 392 Pfam PF16360 GTP-binding GTPase Middle Region 117 196 1.8E-27 T 19-04-2016 IPR032305 GTP-binding protein, middle domain ALIDE2_RS07065 7788ace93c1acd690f26aec3f09d5067 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 204 224 6.2E-8 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS07065 7788ace93c1acd690f26aec3f09d5067 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 272 290 6.2E-8 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS07065 7788ace93c1acd690f26aec3f09d5067 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 225 243 6.2E-8 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS07065 7788ace93c1acd690f26aec3f09d5067 392 Gene3D G3DSA:3.40.50.300 201 373 7.7E-35 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07925 11383d7fd6d8eddfb33b39b8198b1786 592 SUPERFAMILY SSF52540 338 563 1.78E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07925 11383d7fd6d8eddfb33b39b8198b1786 592 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS07925 11383d7fd6d8eddfb33b39b8198b1786 592 PANTHER PTHR24220:SF0 302 315 4.9E-144 T 19-04-2016 ALIDE2_RS07925 11383d7fd6d8eddfb33b39b8198b1786 592 PANTHER PTHR24220:SF0 336 465 4.9E-144 T 19-04-2016 ALIDE2_RS07925 11383d7fd6d8eddfb33b39b8198b1786 592 PANTHER PTHR24220:SF0 12 238 4.9E-144 T 19-04-2016 ALIDE2_RS07925 11383d7fd6d8eddfb33b39b8198b1786 592 SUPERFAMILY SSF52540 14 237 4.75E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07925 11383d7fd6d8eddfb33b39b8198b1786 592 SMART SM00382 370 549 2.3E-13 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS07925 11383d7fd6d8eddfb33b39b8198b1786 592 SMART SM00382 40 225 1.3E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS07925 11383d7fd6d8eddfb33b39b8198b1786 592 PANTHER PTHR24220 302 315 4.9E-144 T 19-04-2016 ALIDE2_RS07925 11383d7fd6d8eddfb33b39b8198b1786 592 PANTHER PTHR24220 336 465 4.9E-144 T 19-04-2016 ALIDE2_RS07925 11383d7fd6d8eddfb33b39b8198b1786 592 PANTHER PTHR24220 12 238 4.9E-144 T 19-04-2016 ALIDE2_RS07925 11383d7fd6d8eddfb33b39b8198b1786 592 Gene3D G3DSA:3.40.50.300 8 237 1.8E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07925 11383d7fd6d8eddfb33b39b8198b1786 592 Gene3D G3DSA:3.40.50.300 338 565 2.9E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07925 11383d7fd6d8eddfb33b39b8198b1786 592 Pfam PF00005 ABC transporter 32 174 3.7E-31 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS07925 11383d7fd6d8eddfb33b39b8198b1786 592 Pfam PF00005 ABC transporter 364 503 4.8E-27 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS07150 2eb0f8e580a8910a9fc593f9a0f73d4b 273 SMART SM00852 6 184 1.5E-32 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS07150 2eb0f8e580a8910a9fc593f9a0f73d4b 273 PANTHER PTHR13939 3 210 1.4E-29 T 19-04-2016 ALIDE2_RS07150 2eb0f8e580a8910a9fc593f9a0f73d4b 273 Pfam PF00994 Probable molybdopterin binding domain 7 177 7.7E-28 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS07150 2eb0f8e580a8910a9fc593f9a0f73d4b 273 SUPERFAMILY SSF53218 3 215 2.09E-34 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS07150 2eb0f8e580a8910a9fc593f9a0f73d4b 273 Gene3D G3DSA:3.40.980.10 3 101 6.7E-31 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS07150 2eb0f8e580a8910a9fc593f9a0f73d4b 273 Gene3D G3DSA:3.40.980.10 136 180 6.7E-31 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS07125 ecc331d280d02104aeea283651505eb7 245 SUPERFAMILY SSF55120 67 241 9.12E-40 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS07125 ecc331d280d02104aeea283651505eb7 245 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 236 4.5E-39 T 19-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ALIDE2_RS07125 ecc331d280d02104aeea283651505eb7 245 Pfam PF00849 RNA pseudouridylate synthase 68 206 3.1E-15 T 19-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS07125 ecc331d280d02104aeea283651505eb7 245 PANTHER PTHR21600 3 244 5.3E-47 T 19-04-2016 ALIDE2_RS07125 ecc331d280d02104aeea283651505eb7 245 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 113 127 - T 19-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ALIDE2_RS07125 ecc331d280d02104aeea283651505eb7 245 SUPERFAMILY SSF55174 1 95 1.26E-5 T 19-04-2016 ALIDE2_RS07125 ecc331d280d02104aeea283651505eb7 245 Gene3D G3DSA:3.10.290.10 1 70 3.6E-5 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS10060 c57565b66591b79e7d5072e8a2ac712a 173 Pfam PF11994 Protein of unknown function (DUF3489) 106 172 1.6E-32 T 19-04-2016 IPR021880 Protein of unknown function DUF3489 ALIDE2_RS05950 58d2341216d314cf59b45b758f734062 536 SUPERFAMILY SSF56024 30 260 9.42E-39 T 19-04-2016 ALIDE2_RS05950 58d2341216d314cf59b45b758f734062 536 Gene3D G3DSA:3.30.870.10 272 500 4.4E-40 T 19-04-2016 ALIDE2_RS05950 58d2341216d314cf59b45b758f734062 536 Gene3D G3DSA:3.30.870.10 35 250 3.9E-34 T 19-04-2016 ALIDE2_RS05950 58d2341216d314cf59b45b758f734062 536 PANTHER PTHR21248:SF12 428 519 6.6E-104 T 19-04-2016 ALIDE2_RS05950 58d2341216d314cf59b45b758f734062 536 PANTHER PTHR21248:SF12 40 409 6.6E-104 T 19-04-2016 ALIDE2_RS05950 58d2341216d314cf59b45b758f734062 536 SMART SM00155 182 209 0.23 T 19-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 ALIDE2_RS05950 58d2341216d314cf59b45b758f734062 536 SMART SM00155 427 454 3.3E-4 T 19-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 ALIDE2_RS05950 58d2341216d314cf59b45b758f734062 536 SUPERFAMILY SSF56024 296 491 3.59E-34 T 19-04-2016 ALIDE2_RS05950 58d2341216d314cf59b45b758f734062 536 PANTHER PTHR21248 428 519 6.6E-104 T 19-04-2016 ALIDE2_RS05950 58d2341216d314cf59b45b758f734062 536 PANTHER PTHR21248 40 409 6.6E-104 T 19-04-2016 ALIDE2_RS05950 58d2341216d314cf59b45b758f734062 536 Pfam PF13091 PLD-like domain 90 241 3.3E-15 T 19-04-2016 IPR025202 Phospholipase D-like domain ALIDE2_RS05950 58d2341216d314cf59b45b758f734062 536 Pfam PF13091 PLD-like domain 333 477 5.9E-23 T 19-04-2016 IPR025202 Phospholipase D-like domain ALIDE2_RS09390 67d685ba5e36a676c6c3cccd5862e1a6 508 Gene3D G3DSA:3.30.420.10 162 304 2.2E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS09390 67d685ba5e36a676c6c3cccd5862e1a6 508 Pfam PF00665 Integrase core domain 130 256 8.7E-18 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS09390 67d685ba5e36a676c6c3cccd5862e1a6 508 PANTHER PTHR35004 2 448 3.3E-77 T 19-04-2016 ALIDE2_RS09390 67d685ba5e36a676c6c3cccd5862e1a6 508 PANTHER PTHR35004:SF2 2 448 3.3E-77 T 19-04-2016 ALIDE2_RS09390 67d685ba5e36a676c6c3cccd5862e1a6 508 Gene3D G3DSA:1.10.10.60 16 40 3.4E-5 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS10365 ebaed2420eb53d31eb0bd874a6b490ff 395 PANTHER PTHR11014 8 394 1.2E-150 T 19-04-2016 ALIDE2_RS10365 ebaed2420eb53d31eb0bd874a6b490ff 395 PANTHER PTHR11014:SF63 8 394 1.2E-150 T 19-04-2016 ALIDE2_RS10365 ebaed2420eb53d31eb0bd874a6b490ff 395 Pfam PF07687 Peptidase dimerisation domain 193 285 1.2E-9 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS10365 ebaed2420eb53d31eb0bd874a6b490ff 395 Gene3D G3DSA:3.30.70.360 187 303 2.1E-42 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS10365 ebaed2420eb53d31eb0bd874a6b490ff 395 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 382 2.0E-111 T 19-04-2016 IPR017439 Amidohydrolase GO:0016787 ALIDE2_RS10365 ebaed2420eb53d31eb0bd874a6b490ff 395 SUPERFAMILY SSF53187 5 203 1.69E-88 T 19-04-2016 ALIDE2_RS10365 ebaed2420eb53d31eb0bd874a6b490ff 395 SUPERFAMILY SSF53187 304 394 1.69E-88 T 19-04-2016 ALIDE2_RS10365 ebaed2420eb53d31eb0bd874a6b490ff 395 PIRSF PIRSF005962 1 395 5.7E-125 T 19-04-2016 IPR017439 Amidohydrolase GO:0016787 ALIDE2_RS10365 ebaed2420eb53d31eb0bd874a6b490ff 395 SUPERFAMILY SSF55031 189 301 4.32E-31 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS10365 ebaed2420eb53d31eb0bd874a6b490ff 395 Pfam PF01546 Peptidase family M20/M25/M40 76 391 2.2E-33 T 19-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 ALIDE2_RS10365 ebaed2420eb53d31eb0bd874a6b490ff 395 Gene3D G3DSA:3.40.630.10 3 184 5.5E-100 T 19-04-2016 ALIDE2_RS10365 ebaed2420eb53d31eb0bd874a6b490ff 395 Gene3D G3DSA:3.40.630.10 304 394 5.5E-100 T 19-04-2016 ALIDE2_RS12500 b130c9fbb290e599b08c77e819327da1 201 Gene3D G3DSA:3.40.50.150 11 156 1.4E-14 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS12500 b130c9fbb290e599b08c77e819327da1 201 SUPERFAMILY SSF53335 6 165 4.4E-20 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS12500 b130c9fbb290e599b08c77e819327da1 201 Pfam PF08242 Methyltransferase domain 53 132 1.0E-7 T 19-04-2016 IPR013217 Methyltransferase type 12 ALIDE2_RS11160 e1bae9c18900e98d238861f27f3e7eb2 451 PANTHER PTHR33803 11 448 1.5E-168 T 19-04-2016 ALIDE2_RS11160 e1bae9c18900e98d238861f27f3e7eb2 451 PANTHER PTHR33803:SF1 11 448 1.5E-168 T 19-04-2016 ALIDE2_RS11160 e1bae9c18900e98d238861f27f3e7eb2 451 Pfam PF05598 Transposase domain (DUF772) 53 126 7.1E-16 T 19-04-2016 IPR008490 Transposase InsH, N-terminal ALIDE2_RS11160 e1bae9c18900e98d238861f27f3e7eb2 451 Pfam PF01609 Transposase DDE domain 279 397 6.5E-6 T 19-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS13050 aff70cd7b8a6133dab432ae9c1d81863 373 SUPERFAMILY SSF53822 32 367 1.02E-75 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS13050 aff70cd7b8a6133dab432ae9c1d81863 373 PANTHER PTHR30483 1 362 2.1E-62 T 19-04-2016 ALIDE2_RS13050 aff70cd7b8a6133dab432ae9c1d81863 373 Gene3D G3DSA:3.40.50.2300 156 238 7.5E-10 T 19-04-2016 ALIDE2_RS13050 aff70cd7b8a6133dab432ae9c1d81863 373 Gene3D G3DSA:3.40.50.2300 288 356 3.4E-50 T 19-04-2016 ALIDE2_RS13050 aff70cd7b8a6133dab432ae9c1d81863 373 Gene3D G3DSA:3.40.50.2300 29 155 3.4E-50 T 19-04-2016 ALIDE2_RS13050 aff70cd7b8a6133dab432ae9c1d81863 373 Pfam PF13458 Periplasmic binding protein 32 361 9.1E-58 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS20270 4898ca17675fdcfffcc4bf2d0ee3356c 241 Gene3D G3DSA:3.10.290.10 9 58 2.0E-17 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS20270 4898ca17675fdcfffcc4bf2d0ee3356c 241 SUPERFAMILY SSF55120 104 240 3.31E-12 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS20270 4898ca17675fdcfffcc4bf2d0ee3356c 241 Pfam PF01479 S4 domain 10 52 1.1E-7 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS20270 4898ca17675fdcfffcc4bf2d0ee3356c 241 PANTHER PTHR21600:SF21 10 235 8.9E-53 T 19-04-2016 ALIDE2_RS20270 4898ca17675fdcfffcc4bf2d0ee3356c 241 SMART SM00363 10 75 4.4E-4 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS20270 4898ca17675fdcfffcc4bf2d0ee3356c 241 PANTHER PTHR21600 10 235 8.9E-53 T 19-04-2016 ALIDE2_RS20270 4898ca17675fdcfffcc4bf2d0ee3356c 241 SUPERFAMILY SSF55174 10 75 5.89E-11 T 19-04-2016 ALIDE2_RS20880 4f867fca6b2e2f4ad9b8efebdece2a55 486 PANTHER PTHR30244 317 486 5.6E-127 T 19-04-2016 ALIDE2_RS20880 4f867fca6b2e2f4ad9b8efebdece2a55 486 PANTHER PTHR30244 2 181 5.6E-127 T 19-04-2016 ALIDE2_RS20880 4f867fca6b2e2f4ad9b8efebdece2a55 486 PANTHER PTHR30244:SF1 317 486 5.6E-127 T 19-04-2016 ALIDE2_RS20880 4f867fca6b2e2f4ad9b8efebdece2a55 486 PANTHER PTHR30244:SF1 2 181 5.6E-127 T 19-04-2016 ALIDE2_RS20880 4f867fca6b2e2f4ad9b8efebdece2a55 486 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.0E-46 T 19-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ALIDE2_RS20880 4f867fca6b2e2f4ad9b8efebdece2a55 486 PRINTS PR00207 Flagellin signature 37 54 3.2E-25 T 19-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ALIDE2_RS20880 4f867fca6b2e2f4ad9b8efebdece2a55 486 PRINTS PR00207 Flagellin signature 76 95 3.2E-25 T 19-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ALIDE2_RS20880 4f867fca6b2e2f4ad9b8efebdece2a55 486 PRINTS PR00207 Flagellin signature 111 134 3.2E-25 T 19-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ALIDE2_RS20880 4f867fca6b2e2f4ad9b8efebdece2a55 486 Gene3D G3DSA:1.20.1330.10 54 171 3.3E-59 T 19-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ALIDE2_RS20880 4f867fca6b2e2f4ad9b8efebdece2a55 486 Gene3D G3DSA:1.20.1330.10 388 442 3.3E-59 T 19-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ALIDE2_RS20880 4f867fca6b2e2f4ad9b8efebdece2a55 486 Pfam PF07196 Flagellin hook IN motif 199 241 1.4E-7 T 19-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 ALIDE2_RS20880 4f867fca6b2e2f4ad9b8efebdece2a55 486 Pfam PF00700 Bacterial flagellin C-terminal helical region 401 485 5.9E-27 T 19-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ALIDE2_RS20880 4f867fca6b2e2f4ad9b8efebdece2a55 486 SUPERFAMILY SSF64518 1 486 2.22E-106 T 19-04-2016 ALIDE2_RS18410 1de44dd5f86ec80c14e3201ae1926322 229 PANTHER PTHR38768:SF1 1 219 3.0E-65 T 19-04-2016 ALIDE2_RS18410 1de44dd5f86ec80c14e3201ae1926322 229 SUPERFAMILY SSF46785 6 87 2.31E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18410 1de44dd5f86ec80c14e3201ae1926322 229 Gene3D G3DSA:1.10.10.10 95 176 1.8E-33 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18410 1de44dd5f86ec80c14e3201ae1926322 229 Gene3D G3DSA:1.10.10.10 5 90 5.5E-34 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18410 1de44dd5f86ec80c14e3201ae1926322 229 PANTHER PTHR38768 1 219 3.0E-65 T 19-04-2016 ALIDE2_RS18410 1de44dd5f86ec80c14e3201ae1926322 229 Hamap MF_01584 UPF0502 protein YceH [yceH]. 10 215 32.152 T 19-04-2016 IPR007432 Protein of unknown function DUF480 ALIDE2_RS18410 1de44dd5f86ec80c14e3201ae1926322 229 Pfam PF04337 Protein of unknown function, DUF480 10 159 3.0E-54 T 19-04-2016 IPR007432 Protein of unknown function DUF480 ALIDE2_RS18410 1de44dd5f86ec80c14e3201ae1926322 229 SUPERFAMILY SSF46785 91 176 2.5E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15995 1d6551fb34ae552488c339a11b566a15 217 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 16 217 39.09 T 19-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 ALIDE2_RS15995 1d6551fb34ae552488c339a11b566a15 217 PANTHER PTHR10851 1 217 1.1E-106 T 19-04-2016 ALIDE2_RS15995 1d6551fb34ae552488c339a11b566a15 217 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 40 125 5.0E-24 T 19-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 ALIDE2_RS15995 1d6551fb34ae552488c339a11b566a15 217 PIRSF PIRSF000190 1 217 6.2E-78 T 19-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 ALIDE2_RS15995 1d6551fb34ae552488c339a11b566a15 217 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 8 217 1.9E-86 T 19-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 ALIDE2_RS15995 1d6551fb34ae552488c339a11b566a15 217 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 177 217 2.4E-18 T 19-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 ALIDE2_RS15995 1d6551fb34ae552488c339a11b566a15 217 PANTHER PTHR10851:SF0 1 217 1.1E-106 T 19-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 ALIDE2_RS15995 1d6551fb34ae552488c339a11b566a15 217 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 187 200 - T 19-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 ALIDE2_RS15995 1d6551fb34ae552488c339a11b566a15 217 SUPERFAMILY SSF50475 13 217 8.04E-66 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 ALIDE2_RS15995 1d6551fb34ae552488c339a11b566a15 217 Gene3D G3DSA:2.30.110.10 16 217 3.1E-84 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 ALIDE2_RS04880 84c3c059443d02760ab283a464229082 323 SUPERFAMILY SSF53850 109 287 6.71E-13 T 19-04-2016 ALIDE2_RS04880 84c3c059443d02760ab283a464229082 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 44 318 2.4E-83 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS04880 84c3c059443d02760ab283a464229082 323 PIRSF PIRSF017082 1 322 2.1E-77 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS04880 84c3c059443d02760ab283a464229082 323 PANTHER PTHR30349:SF32 14 320 1.1E-79 T 19-04-2016 ALIDE2_RS04880 84c3c059443d02760ab283a464229082 323 PANTHER PTHR30349 14 320 1.1E-79 T 19-04-2016 ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 SUPERFAMILY SSF52029 184 376 2.79E-83 T 19-04-2016 IPR027409 GroEL-like apical domain ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 3.5E-98 T 19-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.652 T 19-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 SUPERFAMILY SSF48592 406 521 2.06E-77 T 19-04-2016 ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 SUPERFAMILY SSF48592 7 134 2.06E-77 T 19-04-2016 ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 Gene3D G3DSA:1.10.560.10 369 518 1.3E-41 T 19-04-2016 IPR027413 GroEL-like equatorial domain ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 PANTHER PTHR11353 2 548 9.4E-254 T 19-04-2016 ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 Gene3D G3DSA:1.10.560.10 4 188 2.3E-48 T 19-04-2016 IPR027413 GroEL-like equatorial domain ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 19-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 PRINTS PR00298 60kDa chaperonin signature 83 110 3.3E-74 T 19-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 PRINTS PR00298 60kDa chaperonin signature 398 419 3.3E-74 T 19-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 PRINTS PR00298 60kDa chaperonin signature 268 291 3.3E-74 T 19-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 PRINTS PR00298 60kDa chaperonin signature 27 53 3.3E-74 T 19-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 PRINTS PR00298 60kDa chaperonin signature 350 375 3.3E-74 T 19-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 Gene3D G3DSA:3.50.7.10 189 368 3.8E-99 T 19-04-2016 IPR027409 GroEL-like apical domain ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 3.4E-254 T 19-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 ALIDE2_RS03855 b552b2e690a67fe632a1325c72c0d9db 548 SUPERFAMILY SSF54849 139 203 5.49E-24 T 19-04-2016 ALIDE2_RS09425 324f74248a487b980a7fc588081af52e 154 Gene3D G3DSA:3.10.180.10 5 114 5.0E-18 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS09425 324f74248a487b980a7fc588081af52e 154 SUPERFAMILY SSF54593 2 120 1.75E-20 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS09425 324f74248a487b980a7fc588081af52e 154 PANTHER PTHR41294:SF1 2 153 8.0E-39 T 19-04-2016 ALIDE2_RS09425 324f74248a487b980a7fc588081af52e 154 PANTHER PTHR41294 2 153 8.0E-39 T 19-04-2016 ALIDE2_RS20625 3d4c3f2149fc743669f79820427cd8b4 263 SUPERFAMILY SSF55729 40 224 3.81E-10 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS20625 3d4c3f2149fc743669f79820427cd8b4 263 Gene3D G3DSA:3.40.630.30 47 182 1.5E-4 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS20755 f51a18e6f58014993bd2edca7e9169a7 245 SUPERFAMILY SSF64438 72 218 3.66E-51 T 19-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic ALIDE2_RS20755 f51a18e6f58014993bd2edca7e9169a7 245 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 67 217 29.167 T 19-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 ALIDE2_RS20755 f51a18e6f58014993bd2edca7e9169a7 245 Pfam PF03975 CheD chemotactic sensory transduction 114 213 2.0E-34 T 19-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 ALIDE2_RS20755 f51a18e6f58014993bd2edca7e9169a7 245 PANTHER PTHR35147 46 245 1.0E-81 T 19-04-2016 ALIDE2_RS20755 f51a18e6f58014993bd2edca7e9169a7 245 PANTHER PTHR35147:SF2 46 245 1.0E-81 T 19-04-2016 ALIDE2_RS12510 e71d1ad61056b75f3f1cd0b25a76b08c 193 Gene3D G3DSA:1.20.5.810 10 59 5.7E-29 T 19-04-2016 ALIDE2_RS12510 e71d1ad61056b75f3f1cd0b25a76b08c 193 Gene3D G3DSA:1.20.1290.10 62 184 1.9E-36 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS12510 e71d1ad61056b75f3f1cd0b25a76b08c 193 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 61 94 1.5E-10 T 19-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS12510 e71d1ad61056b75f3f1cd0b25a76b08c 193 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 6 180 2.0E-67 T 19-04-2016 IPR010195 Uncharacterised peroxidase-related ALIDE2_RS12510 e71d1ad61056b75f3f1cd0b25a76b08c 193 Pfam PF02627 Carboxymuconolactone decarboxylase family 46 95 4.6E-12 T 19-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS12510 e71d1ad61056b75f3f1cd0b25a76b08c 193 PANTHER PTHR35446:SF2 4 193 2.6E-91 T 19-04-2016 ALIDE2_RS12510 e71d1ad61056b75f3f1cd0b25a76b08c 193 SUPERFAMILY SSF69118 4 188 6.53E-56 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS12510 e71d1ad61056b75f3f1cd0b25a76b08c 193 PANTHER PTHR35446 4 193 2.6E-91 T 19-04-2016 ALIDE2_RS19125 6833692b166f5bffcdcd2681e745685d 197 Gene3D G3DSA:3.40.50.300 66 195 6.4E-19 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19125 6833692b166f5bffcdcd2681e745685d 197 PANTHER PTHR30050 4 196 1.2E-49 T 19-04-2016 ALIDE2_RS19125 6833692b166f5bffcdcd2681e745685d 197 Pfam PF01695 IstB-like ATP binding protein 52 196 1.7E-46 T 19-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 ALIDE2_RS19125 6833692b166f5bffcdcd2681e745685d 197 SUPERFAMILY SSF52540 81 196 1.06E-17 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19125 6833692b166f5bffcdcd2681e745685d 197 PANTHER PTHR30050:SF6 4 196 1.2E-49 T 19-04-2016 ALIDE2_RS03700 bad50613c9cfccb9eb5c2a94ca09d315 310 PANTHER PTHR31367 6 310 1.3E-109 T 19-04-2016 ALIDE2_RS03700 bad50613c9cfccb9eb5c2a94ca09d315 310 PANTHER PTHR31367:SF5 6 310 1.3E-109 T 19-04-2016 ALIDE2_RS03700 bad50613c9cfccb9eb5c2a94ca09d315 310 Pfam PF06189 5'-nucleotidase 39 298 6.1E-107 T 19-04-2016 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|Reactome: REACT_1698 ALIDE2_RS19550 5a861dab313259eecdef7616c7add240 264 SUPERFAMILY SSF46785 10 84 7.23E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS19550 5a861dab313259eecdef7616c7add240 264 SMART SM00866 101 240 7.0E-24 T 19-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ALIDE2_RS19550 5a861dab313259eecdef7616c7add240 264 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 80 2.2E-17 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS19550 5a861dab313259eecdef7616c7add240 264 PANTHER PTHR11751 129 153 2.1E-21 T 19-04-2016 ALIDE2_RS19550 5a861dab313259eecdef7616c7add240 264 PANTHER PTHR11751 16 82 2.1E-21 T 19-04-2016 ALIDE2_RS19550 5a861dab313259eecdef7616c7add240 264 SUPERFAMILY SSF64288 68 244 2.83E-37 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ALIDE2_RS19550 5a861dab313259eecdef7616c7add240 264 Pfam PF07702 UTRA domain 102 238 1.5E-24 T 19-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ALIDE2_RS19550 5a861dab313259eecdef7616c7add240 264 SMART SM00345 21 80 6.1E-18 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS19550 5a861dab313259eecdef7616c7add240 264 Gene3D G3DSA:3.40.1410.10 76 243 5.1E-36 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ALIDE2_RS19550 5a861dab313259eecdef7616c7add240 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 2.5E-7 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS19550 5a861dab313259eecdef7616c7add240 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 2.5E-7 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS19550 5a861dab313259eecdef7616c7add240 264 Gene3D G3DSA:1.10.10.10 11 75 4.9E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17185 96b6b66775837eb9c1bde904007486af 281 PANTHER PTHR13773 1 281 2.6E-48 T 19-04-2016 ALIDE2_RS17185 96b6b66775837eb9c1bde904007486af 281 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 240 266 - T 19-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 ALIDE2_RS17185 96b6b66775837eb9c1bde904007486af 281 Pfam PF01148 Cytidylyltransferase family 3 279 1.9E-49 T 19-04-2016 ALIDE2_RS17185 96b6b66775837eb9c1bde904007486af 281 PANTHER PTHR13773:SF0 1 281 2.6E-48 T 19-04-2016 ALIDE2_RS02420 59006bbed1fca3f2f8e3f1c39c11bbe1 167 PANTHER PTHR13078 14 167 6.0E-38 T 19-04-2016 ALIDE2_RS02420 59006bbed1fca3f2f8e3f1c39c11bbe1 167 Pfam PF01575 MaoC like domain 29 131 8.3E-12 T 19-04-2016 IPR002539 MaoC-like domain ALIDE2_RS02420 59006bbed1fca3f2f8e3f1c39c11bbe1 167 SUPERFAMILY SSF54637 20 166 5.6E-35 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS02420 59006bbed1fca3f2f8e3f1c39c11bbe1 167 Gene3D G3DSA:3.10.129.10 20 166 8.4E-37 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS14160 edfd05188aab32e5c23a255cadc0d7d4 117 PIRSF PIRSF007028 4 117 4.0E-47 T 19-04-2016 IPR009874 Protein of unknown function DUF1428 ALIDE2_RS14160 edfd05188aab32e5c23a255cadc0d7d4 117 Gene3D G3DSA:3.30.70.900 5 116 6.8E-52 T 19-04-2016 ALIDE2_RS14160 edfd05188aab32e5c23a255cadc0d7d4 117 Pfam PF07237 Protein of unknown function (DUF1428) 5 103 1.0E-44 T 19-04-2016 IPR009874 Protein of unknown function DUF1428 ALIDE2_RS14160 edfd05188aab32e5c23a255cadc0d7d4 117 SUPERFAMILY SSF54909 5 115 1.15E-48 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel ALIDE2_RS21870 5fd185b31ddf24cb6931c5ccb12424b1 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 6.1E-9 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS21870 5fd185b31ddf24cb6931c5ccb12424b1 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 6.1E-9 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS21870 5fd185b31ddf24cb6931c5ccb12424b1 229 SUPERFAMILY SSF46689 15 81 1.49E-17 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS21870 5fd185b31ddf24cb6931c5ccb12424b1 229 ProSitePatterns PS01081 TetR-type HTH domain signature. 41 71 - T 19-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ALIDE2_RS21870 5fd185b31ddf24cb6931c5ccb12424b1 229 PANTHER PTHR30055 12 195 3.4E-21 T 19-04-2016 ALIDE2_RS21870 5fd185b31ddf24cb6931c5ccb12424b1 229 Gene3D G3DSA:1.10.357.10 23 196 1.3E-30 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS21870 5fd185b31ddf24cb6931c5ccb12424b1 229 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 75 2.0E-18 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS23490 f42452880967c1bf0e381075db0f9c55 306 PANTHER PTHR30465:SF59 1 305 8.6E-175 T 19-04-2016 ALIDE2_RS23490 f42452880967c1bf0e381075db0f9c55 306 Gene3D G3DSA:1.10.3720.10 87 294 4.6E-22 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS23490 f42452880967c1bf0e381075db0f9c55 306 PANTHER PTHR30465 1 305 8.6E-175 T 19-04-2016 ALIDE2_RS23490 f42452880967c1bf0e381075db0f9c55 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 9.7E-42 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS23490 f42452880967c1bf0e381075db0f9c55 306 SUPERFAMILY SSF161098 92 288 1.64E-22 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS20975 866db5b2891c951b77ffd550764ace6c 246 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 222 1.4E-54 T 19-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 ALIDE2_RS20975 866db5b2891c951b77ffd550764ace6c 246 PANTHER PTHR30435:SF18 1 246 3.5E-73 T 19-04-2016 ALIDE2_RS20975 866db5b2891c951b77ffd550764ace6c 246 Pfam PF00460 Flagella basal body rod protein 5 35 5.7E-10 T 19-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ALIDE2_RS20975 866db5b2891c951b77ffd550764ace6c 246 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 8.1E-36 T 19-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G ALIDE2_RS20975 866db5b2891c951b77ffd550764ace6c 246 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 132 223 1.3E-20 T 19-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G ALIDE2_RS20975 866db5b2891c951b77ffd550764ace6c 246 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 19-04-2016 IPR019776 Flagellar basal body rod protein, conserved site ALIDE2_RS20975 866db5b2891c951b77ffd550764ace6c 246 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 241 8.1E-21 T 19-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ALIDE2_RS20975 866db5b2891c951b77ffd550764ace6c 246 SUPERFAMILY SSF117143 77 203 1.44E-22 T 19-04-2016 ALIDE2_RS20975 866db5b2891c951b77ffd550764ace6c 246 PANTHER PTHR30435 1 246 3.5E-73 T 19-04-2016 ALIDE2_RS13145 96099e1d3ba478e0ac1cded44a11479e 110 PIRSF PIRSF004555 3 110 1.5E-37 T 19-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family ALIDE2_RS13145 96099e1d3ba478e0ac1cded44a11479e 110 PANTHER PTHR33449:SF1 1 110 1.2E-45 T 19-04-2016 ALIDE2_RS13145 96099e1d3ba478e0ac1cded44a11479e 110 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 4.8E-35 T 19-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family ALIDE2_RS13145 96099e1d3ba478e0ac1cded44a11479e 110 Gene3D G3DSA:3.30.1310.10 1 110 1.0E-48 T 19-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family ALIDE2_RS13145 96099e1d3ba478e0ac1cded44a11479e 110 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.076 T 19-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family ALIDE2_RS13145 96099e1d3ba478e0ac1cded44a11479e 110 SUPERFAMILY SSF82607 11 104 6.41E-34 T 19-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family ALIDE2_RS13145 96099e1d3ba478e0ac1cded44a11479e 110 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 104 1.9E-33 T 19-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family ALIDE2_RS13145 96099e1d3ba478e0ac1cded44a11479e 110 PANTHER PTHR33449 1 110 1.2E-45 T 19-04-2016 ALIDE2_RS18595 fa24b8fe244953cdddcea89c277bffff 370 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 179 337 1.3E-27 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18595 fa24b8fe244953cdddcea89c277bffff 370 Gene3D G3DSA:1.10.3720.10 155 341 1.3E-42 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18595 fa24b8fe244953cdddcea89c277bffff 370 PANTHER PTHR30177:SF2 76 358 1.1E-114 T 19-04-2016 ALIDE2_RS18595 fa24b8fe244953cdddcea89c277bffff 370 SUPERFAMILY SSF161098 156 340 4.19E-43 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18595 fa24b8fe244953cdddcea89c277bffff 370 PANTHER PTHR30177 76 358 1.1E-114 T 19-04-2016 ALIDE2_RS04145 da235d32b00514cbd7c908d16fd69d9f 372 Gene3D G3DSA:3.40.640.10 45 273 1.8E-53 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS04145 da235d32b00514cbd7c908d16fd69d9f 372 Gene3D G3DSA:3.90.1150.10 274 370 6.4E-19 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS04145 da235d32b00514cbd7c908d16fd69d9f 372 PANTHER PTHR11751:SF347 9 369 2.4E-54 T 19-04-2016 ALIDE2_RS04145 da235d32b00514cbd7c908d16fd69d9f 372 SUPERFAMILY SSF53383 16 370 9.01E-66 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS04145 da235d32b00514cbd7c908d16fd69d9f 372 PANTHER PTHR11751 9 369 2.4E-54 T 19-04-2016 ALIDE2_RS04145 da235d32b00514cbd7c908d16fd69d9f 372 Pfam PF00155 Aminotransferase class I and II 55 367 2.4E-36 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ALIDE2_RS04145 da235d32b00514cbd7c908d16fd69d9f 372 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 13 372 47.585 T 19-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 ALIDE2_RS04315 a81ce35713613c677f7ceaf26b9b1e69 409 Gene3D G3DSA:3.60.70.12 12 280 6.4E-97 T 19-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 ALIDE2_RS04315 a81ce35713613c677f7ceaf26b9b1e69 409 SUPERFAMILY SSF56266 16 406 6.15E-137 T 19-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 ALIDE2_RS04315 a81ce35713613c677f7ceaf26b9b1e69 409 PANTHER PTHR23100 18 409 2.6E-169 T 19-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 ALIDE2_RS04315 a81ce35713613c677f7ceaf26b9b1e69 409 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 409 158.898 T 19-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 ALIDE2_RS04315 a81ce35713613c677f7ceaf26b9b1e69 409 PANTHER PTHR23100:SF0 18 409 2.6E-169 T 19-04-2016 ALIDE2_RS04315 a81ce35713613c677f7ceaf26b9b1e69 409 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 16 409 5.3E-123 T 19-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 ALIDE2_RS04315 a81ce35713613c677f7ceaf26b9b1e69 409 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 27 407 5.0E-154 T 19-04-2016 ALIDE2_RS04315 a81ce35713613c677f7ceaf26b9b1e69 409 Pfam PF01960 ArgJ family 22 409 4.4E-143 T 19-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 SUPERFAMILY SSF82693 544 645 9.94E-10 T 19-04-2016 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 SUPERFAMILY SSF82714 695 781 3.53E-9 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 SUPERFAMILY SSF82693 136 181 3.66E-14 T 19-04-2016 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 SUPERFAMILY SSF82693 267 312 3.66E-14 T 19-04-2016 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 SUPERFAMILY SSF82693 41 134 1.46E-18 T 19-04-2016 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 Gene3D G3DSA:1.10.3850.10 788 1003 2.3E-54 T 19-04-2016 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 Gene3D G3DSA:3.30.70.1320 269 298 2.2E-10 T 19-04-2016 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 Gene3D G3DSA:3.30.70.1320 139 178 2.2E-10 T 19-04-2016 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 Gene3D G3DSA:3.30.70.1430 41 138 2.9E-21 T 19-04-2016 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 SUPERFAMILY SSF82866 289 488 5.62E-47 T 19-04-2016 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 PANTHER PTHR32063:SF20 1 1012 0.0 T 19-04-2016 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 Gene3D G3DSA:3.30.70.1430 550 645 2.1E-7 T 19-04-2016 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 Gene3D G3DSA:3.30.2090.10 695 781 2.4E-9 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 Gene3D G3DSA:3.30.2090.10 182 264 3.4E-9 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.3E-53 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 1.3E-53 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 1.3E-53 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 PRINTS PR00702 Acriflavin resistance protein family signature 531 548 1.3E-53 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.3E-53 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 1.3E-53 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 1.3E-53 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 1.3E-53 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 SUPERFAMILY SSF82714 182 264 1.18E-10 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 Gene3D G3DSA:1.20.1640.10 299 495 5.8E-57 T 19-04-2016 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 PANTHER PTHR32063 1 1012 0.0 T 19-04-2016 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 Pfam PF00873 AcrB/AcrD/AcrF family 4 1002 6.3E-218 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS22745 114f16b3eec54709b41b116a0345427b 1019 SUPERFAMILY SSF82866 783 1007 2.88E-44 T 19-04-2016 ALIDE2_RS04065 e7078f6b9a1cf9b2f4229d480a042fa4 136 Pfam PF02675 S-adenosylmethionine decarboxylase 23 135 2.9E-29 T 19-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 ALIDE2_RS04065 e7078f6b9a1cf9b2f4229d480a042fa4 136 SUPERFAMILY SSF56276 19 135 7.06E-32 T 19-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 ALIDE2_RS04065 e7078f6b9a1cf9b2f4229d480a042fa4 136 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 19 135 9.1E-31 T 19-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 ALIDE2_RS04065 e7078f6b9a1cf9b2f4229d480a042fa4 136 Gene3D G3DSA:3.60.90.10 16 135 2.5E-35 T 19-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 ALIDE2_RS04065 e7078f6b9a1cf9b2f4229d480a042fa4 136 PANTHER PTHR33866:SF2 10 135 8.5E-32 T 19-04-2016 ALIDE2_RS04065 e7078f6b9a1cf9b2f4229d480a042fa4 136 PANTHER PTHR33866 10 135 8.5E-32 T 19-04-2016 ALIDE2_RS04065 e7078f6b9a1cf9b2f4229d480a042fa4 136 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 17 136 24.015 T 19-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 ALIDE2_RS08340 e414a7901ea90ead32e5f7531b0692a0 342 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 34 211 5.7E-31 T 19-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal ALIDE2_RS08340 e414a7901ea90ead32e5f7531b0692a0 342 Pfam PF12833 Helix-turn-helix domain 261 337 3.3E-14 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS08340 e414a7901ea90ead32e5f7531b0692a0 342 PANTHER PTHR11019:SF52 236 338 7.6E-34 T 19-04-2016 ALIDE2_RS08340 e414a7901ea90ead32e5f7531b0692a0 342 SMART SM00342 253 336 1.8E-15 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS08340 e414a7901ea90ead32e5f7531b0692a0 342 SUPERFAMILY SSF46689 289 338 3.63E-10 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS08340 e414a7901ea90ead32e5f7531b0692a0 342 Gene3D G3DSA:1.10.10.60 289 338 1.5E-12 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS08340 e414a7901ea90ead32e5f7531b0692a0 342 PANTHER PTHR11019 236 338 7.6E-34 T 19-04-2016 ALIDE2_RS21955 7ae732ea235944577b8f6b7825376145 422 Gene3D G3DSA:3.40.50.150 153 223 2.6E-41 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS21955 7ae732ea235944577b8f6b7825376145 422 Gene3D G3DSA:3.40.50.150 259 402 2.6E-41 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS21955 7ae732ea235944577b8f6b7825376145 422 Pfam PF01170 Putative RNA methylase family UPF0020 167 324 2.9E-35 T 19-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS21955 7ae732ea235944577b8f6b7825376145 422 SMART SM00981 61 159 3.9E-26 T 19-04-2016 IPR004114 THUMP domain GO:0003723 ALIDE2_RS21955 7ae732ea235944577b8f6b7825376145 422 PANTHER PTHR14911 351 400 5.5E-48 T 19-04-2016 ALIDE2_RS21955 7ae732ea235944577b8f6b7825376145 422 PANTHER PTHR14911 2 221 5.5E-48 T 19-04-2016 ALIDE2_RS21955 7ae732ea235944577b8f6b7825376145 422 PANTHER PTHR14911 259 330 5.5E-48 T 19-04-2016 ALIDE2_RS21955 7ae732ea235944577b8f6b7825376145 422 PANTHER PTHR14911:SF13 351 400 5.5E-48 T 19-04-2016 ALIDE2_RS21955 7ae732ea235944577b8f6b7825376145 422 PANTHER PTHR14911:SF13 2 221 5.5E-48 T 19-04-2016 ALIDE2_RS21955 7ae732ea235944577b8f6b7825376145 422 PANTHER PTHR14911:SF13 259 330 5.5E-48 T 19-04-2016 ALIDE2_RS21955 7ae732ea235944577b8f6b7825376145 422 Pfam PF02926 THUMP domain 44 159 1.0E-14 T 19-04-2016 IPR004114 THUMP domain GO:0003723 ALIDE2_RS21955 7ae732ea235944577b8f6b7825376145 422 SUPERFAMILY SSF53335 144 226 3.17E-39 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS21955 7ae732ea235944577b8f6b7825376145 422 SUPERFAMILY SSF53335 262 401 3.17E-39 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS19190 0a0008440e3085b682fbf637da272884 897 Gene3D G3DSA:1.25.40.10 419 482 3.8E-16 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS19190 0a0008440e3085b682fbf637da272884 897 Gene3D G3DSA:1.25.40.10 523 802 3.8E-16 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS19190 0a0008440e3085b682fbf637da272884 897 SUPERFAMILY SSF46894 825 893 1.7E-17 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS19190 0a0008440e3085b682fbf637da272884 897 SUPERFAMILY SSF52540 33 86 6.03E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19190 0a0008440e3085b682fbf637da272884 897 SUPERFAMILY SSF52540 114 240 6.03E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19190 0a0008440e3085b682fbf637da272884 897 Gene3D G3DSA:1.10.10.10 830 892 7.4E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS19190 0a0008440e3085b682fbf637da272884 897 Pfam PF13401 AAA domain 43 161 1.2E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS19190 0a0008440e3085b682fbf637da272884 897 Pfam PF00196 Bacterial regulatory proteins, luxR family 831 886 2.9E-14 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS19190 0a0008440e3085b682fbf637da272884 897 SMART SM00421 830 887 4.2E-16 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS19190 0a0008440e3085b682fbf637da272884 897 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 833 847 7.1E-8 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS19190 0a0008440e3085b682fbf637da272884 897 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 863 875 7.1E-8 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS19190 0a0008440e3085b682fbf637da272884 897 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 847 863 7.1E-8 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS19190 0a0008440e3085b682fbf637da272884 897 Gene3D G3DSA:3.40.50.300 27 150 1.3E-4 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06125 469c2fcc51044b2f3cb1c745d7d4cedb 293 SUPERFAMILY SSF46785 2 107 1.78E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06125 469c2fcc51044b2f3cb1c745d7d4cedb 293 Gene3D G3DSA:3.40.190.10 190 254 2.8E-7 T 19-04-2016 ALIDE2_RS06125 469c2fcc51044b2f3cb1c745d7d4cedb 293 Gene3D G3DSA:3.40.190.10 87 189 1.5E-20 T 19-04-2016 ALIDE2_RS06125 469c2fcc51044b2f3cb1c745d7d4cedb 293 Gene3D G3DSA:1.10.10.10 6 80 3.5E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06125 469c2fcc51044b2f3cb1c745d7d4cedb 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 61 5.8E-17 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06125 469c2fcc51044b2f3cb1c745d7d4cedb 293 PANTHER PTHR30126:SF11 1 235 4.1E-40 T 19-04-2016 ALIDE2_RS06125 469c2fcc51044b2f3cb1c745d7d4cedb 293 SUPERFAMILY SSF53850 86 287 1.29E-25 T 19-04-2016 ALIDE2_RS06125 469c2fcc51044b2f3cb1c745d7d4cedb 293 Pfam PF03466 LysR substrate binding domain 85 284 1.5E-29 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS06125 469c2fcc51044b2f3cb1c745d7d4cedb 293 PANTHER PTHR30126 1 235 4.1E-40 T 19-04-2016 ALIDE2_RS21825 75539168b1e0ee167c36330600d5449e 374 SUPERFAMILY SSF55931 5 367 3.92E-110 T 19-04-2016 ALIDE2_RS21825 75539168b1e0ee167c36330600d5449e 374 PANTHER PTHR36510 1 363 3.0E-113 T 19-04-2016 ALIDE2_RS21825 75539168b1e0ee167c36330600d5449e 374 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 297 6.4E-99 T 19-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ALIDE2_RS21825 75539168b1e0ee167c36330600d5449e 374 PANTHER PTHR36510:SF1 1 363 3.0E-113 T 19-04-2016 ALIDE2_RS21825 75539168b1e0ee167c36330600d5449e 374 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 374 102.643 T 19-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ALIDE2_RS21825 75539168b1e0ee167c36330600d5449e 374 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 291 5.5E-56 T 19-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ALIDE2_RS18490 102df18505a2b6478726cce8b97d2687 272 SUPERFAMILY SSF55811 100 268 6.09E-27 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS18490 102df18505a2b6478726cce8b97d2687 272 Pfam PF00293 NUDIX domain 129 253 4.8E-13 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ALIDE2_RS18490 102df18505a2b6478726cce8b97d2687 272 Gene3D G3DSA:3.90.79.10 97 268 3.5E-38 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS04860 7b84240888e87b8a0a70bfff5f934c77 360 SUPERFAMILY SSF51004 25 345 3.92E-38 T 19-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain ALIDE2_RS04860 7b84240888e87b8a0a70bfff5f934c77 360 Pfam PF10282 Lactonase, 7-bladed beta-propeller 7 356 2.3E-89 T 19-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 ALIDE2_RS04860 7b84240888e87b8a0a70bfff5f934c77 360 Gene3D G3DSA:2.130.10.10 6 356 1.2E-86 T 19-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ALIDE2_RS04860 7b84240888e87b8a0a70bfff5f934c77 360 PANTHER PTHR30344 1 360 2.3E-81 T 19-04-2016 ALIDE2_RS04860 7b84240888e87b8a0a70bfff5f934c77 360 PANTHER PTHR30344:SF1 1 360 2.3E-81 T 19-04-2016 ALIDE2_RS04990 53c6afe1759f1a3e4afeaf115b0dee09 135 SMART SM00450 34 131 4.7E-18 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS04990 53c6afe1759f1a3e4afeaf115b0dee09 135 Gene3D G3DSA:3.40.250.10 31 134 4.1E-29 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS04990 53c6afe1759f1a3e4afeaf115b0dee09 135 SUPERFAMILY SSF52821 14 134 1.09E-32 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS04990 53c6afe1759f1a3e4afeaf115b0dee09 135 PANTHER PTHR12231 41 134 7.0E-17 T 19-04-2016 ALIDE2_RS04990 53c6afe1759f1a3e4afeaf115b0dee09 135 PANTHER PTHR12231:SF138 41 134 7.0E-17 T 19-04-2016 ALIDE2_RS04990 53c6afe1759f1a3e4afeaf115b0dee09 135 Pfam PF00581 Rhodanese-like domain 35 127 3.4E-15 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS03710 035aa1f440dde9df4b305cf859251b6f 331 PANTHER PTHR30137:SF2 1 328 8.9E-127 T 19-04-2016 ALIDE2_RS03710 035aa1f440dde9df4b305cf859251b6f 331 PANTHER PTHR30137 1 328 8.9E-127 T 19-04-2016 ALIDE2_RS03710 035aa1f440dde9df4b305cf859251b6f 331 SUPERFAMILY SSF51679 7 327 1.44E-82 T 19-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ALIDE2_RS03710 035aa1f440dde9df4b305cf859251b6f 331 Pfam PF00296 Luciferase-like monooxygenase 23 300 4.5E-36 T 19-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ALIDE2_RS03710 035aa1f440dde9df4b305cf859251b6f 331 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 7 328 1.7E-129 T 19-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 ALIDE2_RS03710 035aa1f440dde9df4b305cf859251b6f 331 Gene3D G3DSA:3.20.20.30 7 327 3.2E-86 T 19-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ALIDE2_RS21255 1b0cf28d93813c9c0fd360fbd25f4394 276 PANTHER PTHR22981:SF63 51 247 5.5E-14 T 19-04-2016 ALIDE2_RS21255 1b0cf28d93813c9c0fd360fbd25f4394 276 SUPERFAMILY SSF51735 2 150 1.97E-17 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21255 1b0cf28d93813c9c0fd360fbd25f4394 276 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 130 4.3E-8 T 19-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 ALIDE2_RS21255 1b0cf28d93813c9c0fd360fbd25f4394 276 PANTHER PTHR22981 51 247 5.5E-14 T 19-04-2016 ALIDE2_RS21255 1b0cf28d93813c9c0fd360fbd25f4394 276 Gene3D G3DSA:1.10.1040.10 159 261 1.1E-25 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS21255 1b0cf28d93813c9c0fd360fbd25f4394 276 Gene3D G3DSA:3.40.50.720 2 157 9.6E-21 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21255 1b0cf28d93813c9c0fd360fbd25f4394 276 SUPERFAMILY SSF48179 152 250 8.84E-18 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS12075 13923a9bd8bb56227ed495d0039a1bc5 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 44 317 6.9E-86 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12075 13923a9bd8bb56227ed495d0039a1bc5 322 SUPERFAMILY SSF53850 105 284 1.47E-12 T 19-04-2016 ALIDE2_RS12075 13923a9bd8bb56227ed495d0039a1bc5 322 PANTHER PTHR30349:SF16 1 310 3.9E-85 T 19-04-2016 ALIDE2_RS12075 13923a9bd8bb56227ed495d0039a1bc5 322 PIRSF PIRSF017082 1 321 3.1E-71 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12075 13923a9bd8bb56227ed495d0039a1bc5 322 PANTHER PTHR30349 1 310 3.9E-85 T 19-04-2016 ALIDE2_RS22870 3cfc4f271aba3083a5608f919a399dc3 323 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 314 35.687 T 19-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ALIDE2_RS22870 3cfc4f271aba3083a5608f919a399dc3 323 SUPERFAMILY SSF53328 1 214 1.11E-62 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ALIDE2_RS22870 3cfc4f271aba3083a5608f919a399dc3 323 Gene3D G3DSA:3.10.25.10 214 320 7.5E-32 T 19-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ALIDE2_RS22870 3cfc4f271aba3083a5608f919a399dc3 323 Pfam PF02911 Formyl transferase, C-terminal domain 211 311 9.1E-25 T 19-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ALIDE2_RS22870 3cfc4f271aba3083a5608f919a399dc3 323 Pfam PF00551 Formyl transferase 2 188 1.6E-43 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ALIDE2_RS22870 3cfc4f271aba3083a5608f919a399dc3 323 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 140 163 - T 19-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ALIDE2_RS22870 3cfc4f271aba3083a5608f919a399dc3 323 SUPERFAMILY SSF50486 212 319 2.83E-28 T 19-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 ALIDE2_RS22870 3cfc4f271aba3083a5608f919a399dc3 323 Gene3D G3DSA:3.40.50.170 1 212 1.1E-77 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ALIDE2_RS22870 3cfc4f271aba3083a5608f919a399dc3 323 PANTHER PTHR11138 1 317 3.3E-105 T 19-04-2016 ALIDE2_RS22870 3cfc4f271aba3083a5608f919a399dc3 323 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 311 4.6E-87 T 19-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ALIDE2_RS04085 104463dbb084834112ceeaecf79b346f 246 PANTHER PTHR30035 1 224 2.7E-64 T 19-04-2016 IPR007428 MlaA lipoprotein GO:0016020 ALIDE2_RS04085 104463dbb084834112ceeaecf79b346f 246 PANTHER PTHR30035:SF3 1 224 2.7E-64 T 19-04-2016 ALIDE2_RS04085 104463dbb084834112ceeaecf79b346f 246 Pfam PF04333 MlaA lipoprotein 36 227 5.4E-74 T 19-04-2016 IPR007428 MlaA lipoprotein GO:0016020 ALIDE2_RS04085 104463dbb084834112ceeaecf79b346f 246 PRINTS PR01805 VacJ lipoprotein signature 105 122 4.0E-27 T 19-04-2016 IPR007428 MlaA lipoprotein GO:0016020 ALIDE2_RS04085 104463dbb084834112ceeaecf79b346f 246 PRINTS PR01805 VacJ lipoprotein signature 37 50 4.0E-27 T 19-04-2016 IPR007428 MlaA lipoprotein GO:0016020 ALIDE2_RS04085 104463dbb084834112ceeaecf79b346f 246 PRINTS PR01805 VacJ lipoprotein signature 141 158 4.0E-27 T 19-04-2016 IPR007428 MlaA lipoprotein GO:0016020 ALIDE2_RS04085 104463dbb084834112ceeaecf79b346f 246 PRINTS PR01805 VacJ lipoprotein signature 54 70 4.0E-27 T 19-04-2016 IPR007428 MlaA lipoprotein GO:0016020 ALIDE2_RS08180 4fdee3a5df1ad612c4483a17d77783c6 301 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 299 1.3E-115 T 19-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 ALIDE2_RS08180 4fdee3a5df1ad612c4483a17d77783c6 301 PANTHER PTHR10314 1 299 1.9E-156 T 19-04-2016 ALIDE2_RS08180 4fdee3a5df1ad612c4483a17d77783c6 301 Gene3D G3DSA:3.40.50.1100 153 300 1.5E-76 T 19-04-2016 ALIDE2_RS08180 4fdee3a5df1ad612c4483a17d77783c6 301 Gene3D G3DSA:3.40.50.1100 1 46 1.5E-76 T 19-04-2016 ALIDE2_RS08180 4fdee3a5df1ad612c4483a17d77783c6 301 TIGRFAM TIGR01138 cysM: cysteine synthase B 6 299 7.5E-134 T 19-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 ALIDE2_RS08180 4fdee3a5df1ad612c4483a17d77783c6 301 Gene3D G3DSA:3.40.50.1100 47 147 2.0E-38 T 19-04-2016 ALIDE2_RS08180 4fdee3a5df1ad612c4483a17d77783c6 301 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 37 55 - T 19-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 ALIDE2_RS08180 4fdee3a5df1ad612c4483a17d77783c6 301 PANTHER PTHR10314:SF100 1 299 1.9E-156 T 19-04-2016 ALIDE2_RS08180 4fdee3a5df1ad612c4483a17d77783c6 301 SUPERFAMILY SSF53686 1 299 5.11E-90 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS08180 4fdee3a5df1ad612c4483a17d77783c6 301 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 288 4.7E-64 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS06395 738df539cc579cc3e3da5f6b5b22c583 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 255 3.8E-9 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALIDE2_RS06395 738df539cc579cc3e3da5f6b5b22c583 257 SMART SM00382 32 233 1.3E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS06395 738df539cc579cc3e3da5f6b5b22c583 257 Gene3D G3DSA:3.40.50.300 5 253 1.7E-67 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06395 738df539cc579cc3e3da5f6b5b22c583 257 PANTHER PTHR24220:SF358 9 107 6.0E-118 T 19-04-2016 ALIDE2_RS06395 738df539cc579cc3e3da5f6b5b22c583 257 PANTHER PTHR24220:SF358 123 257 6.0E-118 T 19-04-2016 ALIDE2_RS06395 738df539cc579cc3e3da5f6b5b22c583 257 PANTHER PTHR24220 9 107 6.0E-118 T 19-04-2016 ALIDE2_RS06395 738df539cc579cc3e3da5f6b5b22c583 257 PANTHER PTHR24220 123 257 6.0E-118 T 19-04-2016 ALIDE2_RS06395 738df539cc579cc3e3da5f6b5b22c583 257 Pfam PF00005 ABC transporter 24 183 5.8E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS06395 738df539cc579cc3e3da5f6b5b22c583 257 SUPERFAMILY SSF52540 7 255 6.15E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 PIRSF PIRSF037495 1 462 2.0E-156 T 19-04-2016 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 270 1.4E-12 T 19-04-2016 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.4E-12 T 19-04-2016 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 179 1.4E-12 T 19-04-2016 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 1.4E-12 T 19-04-2016 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 PANTHER PTHR22912:SF141 1 345 7.1E-39 T 19-04-2016 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 Gene3D G3DSA:3.50.50.60 264 335 9.5E-27 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 Gene3D G3DSA:3.50.50.60 8 115 9.5E-27 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 3.6E-15 T 19-04-2016 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 271 3.6E-15 T 19-04-2016 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 3.6E-15 T 19-04-2016 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 3.6E-15 T 19-04-2016 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 3.6E-15 T 19-04-2016 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 SUPERFAMILY SSF51905 5 333 1.2E-33 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 Gene3D G3DSA:3.50.50.60 116 263 6.6E-7 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 309 3.8E-22 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 PANTHER PTHR22912 1 345 7.1E-39 T 19-04-2016 ALIDE2_RS11285 c127672c75a01ee70e2bccbf5c07cfdd 462 Pfam PF04324 BFD-like [2Fe-2S] binding domain 380 431 1.3E-6 T 19-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain ALIDE2_RS12285 f31d9ed33a8553c78daa0182c050b34a 387 Pfam PF00437 Type II/IV secretion system protein 12 272 2.5E-38 T 19-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ALIDE2_RS12285 f31d9ed33a8553c78daa0182c050b34a 387 PANTHER PTHR30486 4 375 8.0E-125 T 19-04-2016 ALIDE2_RS12285 f31d9ed33a8553c78daa0182c050b34a 387 PANTHER PTHR30486:SF3 4 375 8.0E-125 T 19-04-2016 ALIDE2_RS12285 f31d9ed33a8553c78daa0182c050b34a 387 Gene3D G3DSA:3.40.50.300 104 343 8.3E-60 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12285 f31d9ed33a8553c78daa0182c050b34a 387 SUPERFAMILY SSF52540 5 335 1.17E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12285 f31d9ed33a8553c78daa0182c050b34a 387 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 4 343 4.8E-120 T 19-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 ALIDE2_RS12285 f31d9ed33a8553c78daa0182c050b34a 387 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 194 208 - T 19-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ALIDE2_RS02800 5531da36ff85ec8df08c9263b4e3f340 319 SUPERFAMILY SSF53067 2 313 4.72E-43 T 19-04-2016 ALIDE2_RS02800 5531da36ff85ec8df08c9263b4e3f340 319 PANTHER PTHR18964:SF123 1 303 2.2E-28 T 19-04-2016 ALIDE2_RS02800 5531da36ff85ec8df08c9263b4e3f340 319 Pfam PF00480 ROK family 3 310 1.0E-30 T 19-04-2016 IPR000600 ROK family ALIDE2_RS02800 5531da36ff85ec8df08c9263b4e3f340 319 PANTHER PTHR18964 1 303 2.2E-28 T 19-04-2016 ALIDE2_RS02800 5531da36ff85ec8df08c9263b4e3f340 319 Gene3D G3DSA:3.30.420.40 2 159 9.4E-26 T 19-04-2016 ALIDE2_RS02800 5531da36ff85ec8df08c9263b4e3f340 319 Gene3D G3DSA:3.30.420.40 160 298 6.4E-33 T 19-04-2016 ALIDE2_RS02975 76d67d3240c5f01c59a7b2987fb0c6e8 721 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 719 23.498 T 19-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02975 76d67d3240c5f01c59a7b2987fb0c6e8 721 SUPERFAMILY SSF109604 353 523 1.57E-14 T 19-04-2016 ALIDE2_RS02975 76d67d3240c5f01c59a7b2987fb0c6e8 721 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 582 2.5E-199 T 19-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02975 76d67d3240c5f01c59a7b2987fb0c6e8 721 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 2.2E-21 T 19-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02975 76d67d3240c5f01c59a7b2987fb0c6e8 721 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 53 65 2.2E-21 T 19-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02975 76d67d3240c5f01c59a7b2987fb0c6e8 721 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 427 446 2.2E-21 T 19-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02975 76d67d3240c5f01c59a7b2987fb0c6e8 721 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 259 274 2.2E-21 T 19-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02975 76d67d3240c5f01c59a7b2987fb0c6e8 721 PANTHER PTHR30075 4 721 5.1E-240 T 19-04-2016 ALIDE2_RS02975 76d67d3240c5f01c59a7b2987fb0c6e8 721 PANTHER PTHR30075:SF2 4 721 5.1E-240 T 19-04-2016 ALIDE2_RS02975 76d67d3240c5f01c59a7b2987fb0c6e8 721 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 4 719 1.2E-189 T 19-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ALIDE2_RS02975 76d67d3240c5f01c59a7b2987fb0c6e8 721 Pfam PF05746 DALR anticodon binding domain 613 711 5.7E-8 T 19-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 Pfam PF01568 Molydopterin dinucleotide binding domain 856 983 2.9E-19 T 19-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 SUPERFAMILY SSF50692 822 990 2.22E-38 T 19-04-2016 IPR009010 Aspartate decarboxylase-like domain ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 80 129 3.4E-11 T 19-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 PANTHER PTHR11615 765 990 2.0E-295 T 19-04-2016 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 PANTHER PTHR11615 27 399 2.0E-295 T 19-04-2016 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 PANTHER PTHR11615 418 624 2.0E-295 T 19-04-2016 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 SUPERFAMILY SSF53706 75 632 1.07E-201 T 19-04-2016 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 Gene3D G3DSA:2.40.40.20 851 990 1.4E-50 T 19-04-2016 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 Gene3D G3DSA:2.40.40.20 803 814 1.4E-50 T 19-04-2016 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 Gene3D G3DSA:2.40.40.20 686 707 1.4E-50 T 19-04-2016 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 Gene3D G3DSA:2.20.25.90 76 132 7.0E-16 T 19-04-2016 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 Gene3D G3DSA:3.40.50.740 456 639 4.4E-70 T 19-04-2016 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 Gene3D G3DSA:3.40.50.740 389 415 4.4E-70 T 19-04-2016 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 Gene3D G3DSA:3.40.50.740 671 685 4.4E-70 T 19-04-2016 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 Gene3D G3DSA:3.40.50.740 135 206 4.4E-70 T 19-04-2016 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 SMART SM00926 78 132 3.6E-14 T 19-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 Pfam PF00384 Molybdopterin oxidoreductase 135 589 2.6E-56 T 19-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 Gene3D G3DSA:3.40.228.10 208 388 2.1E-60 T 19-04-2016 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 83 100 - T 19-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 PANTHER PTHR11615:SF140 765 990 2.0E-295 T 19-04-2016 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 PANTHER PTHR11615:SF140 27 399 2.0E-295 T 19-04-2016 ALIDE2_RS05255 c19a5a6460db2f3c335c41df14ae9150 990 PANTHER PTHR11615:SF140 418 624 2.0E-295 T 19-04-2016 ALIDE2_RS00625 3590e7cf7fa653839b0f5f4075c07720 524 PANTHER PTHR24096 14 515 6.8E-131 T 19-04-2016 ALIDE2_RS00625 3590e7cf7fa653839b0f5f4075c07720 524 Gene3D G3DSA:2.30.38.10 336 411 8.1E-18 T 19-04-2016 ALIDE2_RS00625 3590e7cf7fa653839b0f5f4075c07720 524 Gene3D G3DSA:3.40.50.980 181 329 9.0E-33 T 19-04-2016 ALIDE2_RS00625 3590e7cf7fa653839b0f5f4075c07720 524 Gene3D G3DSA:3.40.50.980 17 180 5.1E-36 T 19-04-2016 ALIDE2_RS00625 3590e7cf7fa653839b0f5f4075c07720 524 SUPERFAMILY SSF56801 14 518 1.15E-137 T 19-04-2016 ALIDE2_RS00625 3590e7cf7fa653839b0f5f4075c07720 524 Pfam PF13193 AMP-binding enzyme C-terminal domain 432 506 5.8E-19 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS00625 3590e7cf7fa653839b0f5f4075c07720 524 Pfam PF00501 AMP-binding enzyme 23 422 1.1E-80 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS00625 3590e7cf7fa653839b0f5f4075c07720 524 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS00625 3590e7cf7fa653839b0f5f4075c07720 524 Gene3D G3DSA:3.30.300.30 417 516 5.5E-31 T 19-04-2016 ALIDE2_RS16800 728f978b86ccbc94dfc11ae3888a2388 92 Pfam PF01527 Transposase 3 70 6.7E-15 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS16800 728f978b86ccbc94dfc11ae3888a2388 92 SUPERFAMILY SSF46689 1 89 3.05E-20 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS16800 728f978b86ccbc94dfc11ae3888a2388 92 PANTHER PTHR33215 1 91 2.5E-22 T 19-04-2016 ALIDE2_RS16800 728f978b86ccbc94dfc11ae3888a2388 92 PANTHER PTHR33215:SF1 1 91 2.5E-22 T 19-04-2016 ALIDE2_RS16800 728f978b86ccbc94dfc11ae3888a2388 92 Gene3D G3DSA:1.10.10.60 8 86 8.1E-20 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS07145 ea78e937eaa2032f3b4bdbe3f3785c43 301 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 12 221 9.1E-23 T 19-04-2016 ALIDE2_RS00490 435f3dd9a6247e5b5df1b214a9e9345c 179 SUPERFAMILY SSF50475 12 164 4.17E-50 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 ALIDE2_RS00490 435f3dd9a6247e5b5df1b214a9e9345c 179 SMART SM00903 21 165 6.2E-58 T 19-04-2016 IPR002563 Flavin reductase like domain GO:0010181 ALIDE2_RS00490 435f3dd9a6247e5b5df1b214a9e9345c 179 Pfam PF01613 Flavin reductase like domain 23 164 5.5E-34 T 19-04-2016 IPR002563 Flavin reductase like domain GO:0010181 ALIDE2_RS00490 435f3dd9a6247e5b5df1b214a9e9345c 179 Gene3D G3DSA:2.30.110.10 9 163 1.9E-56 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 ALIDE2_RS00490 435f3dd9a6247e5b5df1b214a9e9345c 179 PANTHER PTHR30466:SF2 13 177 5.4E-35 T 19-04-2016 ALIDE2_RS00490 435f3dd9a6247e5b5df1b214a9e9345c 179 PANTHER PTHR30466 13 177 5.4E-35 T 19-04-2016 ALIDE2_RS19555 89e5a22c3f1d515d3123147ec31b38a0 616 Gene3D G3DSA:3.40.50.720 408 540 2.3E-33 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS19555 89e5a22c3f1d515d3123147ec31b38a0 616 SUPERFAMILY SSF51735 412 540 1.24E-32 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS19555 89e5a22c3f1d515d3123147ec31b38a0 616 PANTHER PTHR16254:SF6 12 566 1.1E-211 T 19-04-2016 ALIDE2_RS19555 89e5a22c3f1d515d3123147ec31b38a0 616 Pfam PF00999 Sodium/hydrogen exchanger family 15 381 4.0E-63 T 19-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ALIDE2_RS19555 89e5a22c3f1d515d3123147ec31b38a0 616 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 291 8.3E-86 T 19-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 ALIDE2_RS19555 89e5a22c3f1d515d3123147ec31b38a0 616 Pfam PF02254 TrkA-N domain 412 524 2.4E-22 T 19-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ALIDE2_RS19555 89e5a22c3f1d515d3123147ec31b38a0 616 PANTHER PTHR16254 12 566 1.1E-211 T 19-04-2016 ALIDE2_RS01525 5050b975a85039986d18d7a87b20f2e7 259 SMART SM00382 29 229 1.1E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS01525 5050b975a85039986d18d7a87b20f2e7 259 Pfam PF00005 ABC transporter 21 180 6.1E-29 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS01525 5050b975a85039986d18d7a87b20f2e7 259 PANTHER PTHR24220:SF358 6 256 1.6E-103 T 19-04-2016 ALIDE2_RS01525 5050b975a85039986d18d7a87b20f2e7 259 SUPERFAMILY SSF52540 4 252 7.28E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01525 5050b975a85039986d18d7a87b20f2e7 259 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 252 1.2E-13 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALIDE2_RS01525 5050b975a85039986d18d7a87b20f2e7 259 PANTHER PTHR24220 6 256 1.6E-103 T 19-04-2016 ALIDE2_RS01525 5050b975a85039986d18d7a87b20f2e7 259 Gene3D G3DSA:3.40.50.300 2 252 9.9E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17935 5507f0e29ef5b563e2ff43d79f2512ba 313 Pfam PF12697 Alpha/beta hydrolase family 44 302 2.0E-16 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS17935 5507f0e29ef5b563e2ff43d79f2512ba 313 PANTHER PTHR10992:SF771 225 306 7.8E-25 T 19-04-2016 ALIDE2_RS17935 5507f0e29ef5b563e2ff43d79f2512ba 313 PANTHER PTHR10992:SF771 20 207 7.8E-25 T 19-04-2016 ALIDE2_RS17935 5507f0e29ef5b563e2ff43d79f2512ba 313 PANTHER PTHR10992 225 306 7.8E-25 T 19-04-2016 ALIDE2_RS17935 5507f0e29ef5b563e2ff43d79f2512ba 313 PANTHER PTHR10992 20 207 7.8E-25 T 19-04-2016 ALIDE2_RS17935 5507f0e29ef5b563e2ff43d79f2512ba 313 Gene3D G3DSA:3.40.50.1820 20 304 5.5E-70 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS17935 5507f0e29ef5b563e2ff43d79f2512ba 313 SUPERFAMILY SSF53474 22 304 1.05E-35 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS06150 a0bc3d84bd91c24f0fbe34272e0e9492 549 Gene3D G3DSA:1.10.540.10 153 265 6.9E-23 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS06150 a0bc3d84bd91c24f0fbe34272e0e9492 549 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 393 541 5.5E-38 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS06150 a0bc3d84bd91c24f0fbe34272e0e9492 549 SUPERFAMILY SSF47203 392 539 2.42E-39 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS06150 a0bc3d84bd91c24f0fbe34272e0e9492 549 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 499 518 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS06150 a0bc3d84bd91c24f0fbe34272e0e9492 549 Gene3D G3DSA:1.20.140.10 380 545 2.0E-48 T 19-04-2016 ALIDE2_RS06150 a0bc3d84bd91c24f0fbe34272e0e9492 549 SUPERFAMILY SSF56645 144 404 3.14E-56 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS06150 a0bc3d84bd91c24f0fbe34272e0e9492 549 PANTHER PTHR10909 147 549 1.1E-96 T 19-04-2016 ALIDE2_RS06150 a0bc3d84bd91c24f0fbe34272e0e9492 549 Gene3D G3DSA:2.40.110.10 269 379 2.4E-28 T 19-04-2016 ALIDE2_RS06150 a0bc3d84bd91c24f0fbe34272e0e9492 549 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 269 377 6.4E-19 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS06150 a0bc3d84bd91c24f0fbe34272e0e9492 549 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 153 265 1.9E-22 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS02205 ab63dcb563ddcd9db702870a5b70c162 343 SUPERFAMILY SSF53448 5 266 3.66E-51 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS02205 ab63dcb563ddcd9db702870a5b70c162 343 Pfam PF00535 Glycosyl transferase family 2 12 176 1.4E-27 T 19-04-2016 IPR001173 Glycosyltransferase 2-like ALIDE2_RS02205 ab63dcb563ddcd9db702870a5b70c162 343 Gene3D G3DSA:3.90.550.10 8 182 3.8E-29 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS02205 ab63dcb563ddcd9db702870a5b70c162 343 PANTHER PTHR10859 7 343 2.2E-109 T 19-04-2016 ALIDE2_RS02205 ab63dcb563ddcd9db702870a5b70c162 343 PANTHER PTHR10859:SF49 7 343 2.2E-109 T 19-04-2016 ALIDE2_RS07885 75052b0820b4a67c1776f2dd0bead5cf 154 SUPERFAMILY SSF47598 4 42 3.22E-6 T 19-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 ALIDE2_RS07885 75052b0820b4a67c1776f2dd0bead5cf 154 Gene3D G3DSA:1.10.1220.10 6 38 1.2E-5 T 19-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 ALIDE2_RS07885 75052b0820b4a67c1776f2dd0bead5cf 154 Pfam PF01402 Ribbon-helix-helix protein, copG family 10 41 7.0E-5 T 19-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 ALIDE2_RS04205 fc90c22432da10c257441f05b0df6e63 338 Gene3D G3DSA:3.40.50.720 1 179 1.3E-51 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04205 fc90c22432da10c257441f05b0df6e63 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 2.0E-5 T 19-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 ALIDE2_RS04205 fc90c22432da10c257441f05b0df6e63 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 2.0E-5 T 19-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 ALIDE2_RS04205 fc90c22432da10c257441f05b0df6e63 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 2.0E-5 T 19-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 ALIDE2_RS04205 fc90c22432da10c257441f05b0df6e63 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 330 5.1E-127 T 19-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 ALIDE2_RS04205 fc90c22432da10c257441f05b0df6e63 338 PANTHER PTHR10366:SF39 1 329 6.0E-139 T 19-04-2016 ALIDE2_RS04205 fc90c22432da10c257441f05b0df6e63 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 323 7.1E-55 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04205 fc90c22432da10c257441f05b0df6e63 338 Gene3D G3DSA:3.90.25.10 180 231 1.3E-46 T 19-04-2016 ALIDE2_RS04205 fc90c22432da10c257441f05b0df6e63 338 Gene3D G3DSA:3.90.25.10 263 329 1.3E-46 T 19-04-2016 ALIDE2_RS04205 fc90c22432da10c257441f05b0df6e63 338 SUPERFAMILY SSF51735 1 328 6.87E-93 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04205 fc90c22432da10c257441f05b0df6e63 338 PANTHER PTHR10366 1 329 6.0E-139 T 19-04-2016 ALIDE2_RS05065 7c027a359b333cbba365ce980e6c88d6 120 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 89 2.0E-9 T 19-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 ALIDE2_RS05065 7c027a359b333cbba365ce980e6c88d6 120 PANTHER PTHR37950:SF1 2 118 1.3E-22 T 19-04-2016 ALIDE2_RS05065 7c027a359b333cbba365ce980e6c88d6 120 PANTHER PTHR37950 2 118 1.3E-22 T 19-04-2016 ALIDE2_RS05065 7c027a359b333cbba365ce980e6c88d6 120 SUPERFAMILY SSF55331 2 118 9.94E-25 T 19-04-2016 IPR014347 Tautomerase/MIF superfamily ALIDE2_RS05065 7c027a359b333cbba365ce980e6c88d6 120 Gene3D G3DSA:3.30.429.10 1 118 2.0E-31 T 19-04-2016 ALIDE2_RS10565 eb4fb2e5bbc18986686aefcbe10fd511 241 PANTHER PTHR12725:SF65 1 241 1.6E-46 T 19-04-2016 ALIDE2_RS10565 eb4fb2e5bbc18986686aefcbe10fd511 241 PANTHER PTHR12725 1 241 1.6E-46 T 19-04-2016 ALIDE2_RS10565 eb4fb2e5bbc18986686aefcbe10fd511 241 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 171 4.6E-5 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS10565 eb4fb2e5bbc18986686aefcbe10fd511 241 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 201 214 4.6E-5 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS10565 eb4fb2e5bbc18986686aefcbe10fd511 241 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 17 28 4.6E-5 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS10565 eb4fb2e5bbc18986686aefcbe10fd511 241 Pfam PF13419 Haloacid dehalogenase-like hydrolase 144 211 2.9E-8 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS10565 eb4fb2e5bbc18986686aefcbe10fd511 241 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 132 206 5.2E-8 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS10565 eb4fb2e5bbc18986686aefcbe10fd511 241 Gene3D G3DSA:3.40.50.1000 16 236 1.2E-30 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS10565 eb4fb2e5bbc18986686aefcbe10fd511 241 SUPERFAMILY SSF56784 17 240 7.37E-40 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS14640 30bb21fa4e9007c5e7f602b26b0da6a8 261 Gene3D G3DSA:3.90.550.10 7 260 4.4E-75 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS14640 30bb21fa4e9007c5e7f602b26b0da6a8 261 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 5 260 41.229 T 19-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 ALIDE2_RS14640 30bb21fa4e9007c5e7f602b26b0da6a8 261 SUPERFAMILY SSF53448 7 260 1.48E-57 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS14640 30bb21fa4e9007c5e7f602b26b0da6a8 261 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 7 253 1.0E-84 T 19-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 ALIDE2_RS14640 30bb21fa4e9007c5e7f602b26b0da6a8 261 PANTHER PTHR21485 7 261 5.1E-98 T 19-04-2016 ALIDE2_RS14640 30bb21fa4e9007c5e7f602b26b0da6a8 261 Pfam PF02348 Cytidylyltransferase 9 233 1.3E-50 T 19-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 ALIDE2_RS14640 30bb21fa4e9007c5e7f602b26b0da6a8 261 PANTHER PTHR21485:SF4 7 261 5.1E-98 T 19-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 ALIDE2_RS22180 736d81c6acbdb4d88f7547a7cce3c198 217 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 203 1.4E-31 T 19-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 ALIDE2_RS22180 736d81c6acbdb4d88f7547a7cce3c198 217 PANTHER PTHR30625 19 214 2.8E-31 T 19-04-2016 ALIDE2_RS22180 736d81c6acbdb4d88f7547a7cce3c198 217 PANTHER PTHR30625:SF3 19 214 2.8E-31 T 19-04-2016 ALIDE2_RS18060 d3ffcd7375b99d6e66a74d653459ee4b 316 Gene3D G3DSA:3.90.1200.10 106 312 5.7E-64 T 19-04-2016 ALIDE2_RS18060 d3ffcd7375b99d6e66a74d653459ee4b 316 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 307 1.8E-96 T 19-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 ALIDE2_RS18060 d3ffcd7375b99d6e66a74d653459ee4b 316 Gene3D G3DSA:3.30.200.20 1 102 3.5E-39 T 19-04-2016 ALIDE2_RS18060 d3ffcd7375b99d6e66a74d653459ee4b 316 Pfam PF01636 Phosphotransferase enzyme family 27 256 6.0E-32 T 19-04-2016 IPR002575 Aminoglycoside phosphotransferase ALIDE2_RS18060 d3ffcd7375b99d6e66a74d653459ee4b 316 PANTHER PTHR21064 12 285 3.7E-40 T 19-04-2016 ALIDE2_RS18060 d3ffcd7375b99d6e66a74d653459ee4b 316 Hamap MF_00301 Homoserine kinase [thrB]. 1 316 164.575 T 19-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 ALIDE2_RS18060 d3ffcd7375b99d6e66a74d653459ee4b 316 SUPERFAMILY SSF56112 5 311 9.04E-72 T 19-04-2016 IPR011009 Protein kinase-like domain ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 SUPERFAMILY SSF53748 14 393 9.89E-137 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 Pfam PF00162 Phosphoglycerate kinase 15 383 7.3E-135 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 Gene3D G3DSA:3.40.50.1270 180 381 1.4E-80 T 19-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 19 29 - T 19-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 PIRSF PIRSF000724 3 396 1.6E-132 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 393 38.281 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 Gene3D G3DSA:3.40.50.1260 14 179 4.7E-59 T 19-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 PANTHER PTHR11406 16 396 6.9E-181 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 7.6E-79 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 PRINTS PR00477 Phosphoglycerate kinase family signature 14 30 7.6E-79 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 PRINTS PR00477 Phosphoglycerate kinase family signature 191 210 7.6E-79 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 7.6E-79 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 PRINTS PR00477 Phosphoglycerate kinase family signature 313 338 7.6E-79 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 PRINTS PR00477 Phosphoglycerate kinase family signature 168 190 7.6E-79 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 PRINTS PR00477 Phosphoglycerate kinase family signature 36 58 7.6E-79 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 7.6E-79 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS22885 adfd04731f6942b732f2220794eeaa32 397 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 7.6E-79 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 ALIDE2_RS16000 e8f7d30b40054e04d1000f5184ce3569 312 Pfam PF03547 Membrane transport protein 5 147 4.8E-9 T 19-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 ALIDE2_RS16000 e8f7d30b40054e04d1000f5184ce3569 312 Pfam PF03547 Membrane transport protein 162 303 2.6E-15 T 19-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 ALIDE2_RS16000 e8f7d30b40054e04d1000f5184ce3569 312 PANTHER PTHR31752:SF13 99 310 6.6E-22 T 19-04-2016 ALIDE2_RS16000 e8f7d30b40054e04d1000f5184ce3569 312 PANTHER PTHR31752 99 310 6.6E-22 T 19-04-2016 ALIDE2_RS01395 e4065d6e66948f0487f5cb9060645bc5 260 SUPERFAMILY SSF56529 1 260 6.8E-86 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS01395 e4065d6e66948f0487f5cb9060645bc5 260 Gene3D G3DSA:3.90.850.10 3 260 9.0E-93 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS01395 e4065d6e66948f0487f5cb9060645bc5 260 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 95 258 3.3E-13 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS01395 e4065d6e66948f0487f5cb9060645bc5 260 TIGRFAM TIGR03220 catechol_dmpE: 2-oxopent-4-enoate hydratase 6 259 3.0E-143 T 19-04-2016 IPR017632 2-oxopent-4-enoate hydratase ALIDE2_RS01395 e4065d6e66948f0487f5cb9060645bc5 260 PANTHER PTHR30143 1 260 1.3E-81 T 19-04-2016 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 Gene3D G3DSA:1.10.10.10 730 800 3.0E-32 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 SUPERFAMILY SSF88659 697 799 5.23E-27 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 SUPERFAMILY SSF88659 640 713 9.16E-17 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 Gene3D G3DSA:1.10.10.10 640 691 4.3E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 Pfam PF04545 Sigma-70, region 4 736 788 1.9E-18 T 19-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 563 788 1.9E-40 T 19-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 591 604 - T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 PANTHER PTHR30603:SF0 190 346 1.3E-218 T 19-04-2016 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 PANTHER PTHR30603:SF0 514 802 1.3E-218 T 19-04-2016 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 760 786 - T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 563 799 6.5E-118 T 19-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 SUPERFAMILY SSF88946 309 634 3.3E-108 T 19-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 Pfam PF00140 Sigma-70 factor, region 1.2 292 323 2.0E-12 T 19-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 PANTHER PTHR30603 190 346 1.3E-218 T 19-04-2016 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 PANTHER PTHR30603 514 802 1.3E-218 T 19-04-2016 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 Pfam PF03979 Sigma-70 factor, region 1.1 196 275 5.8E-23 T 19-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 Pfam PF04539 Sigma-70 region 3 646 721 1.6E-22 T 19-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 PRINTS PR00046 Major sigma-70 factor signature 615 623 1.0E-30 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 PRINTS PR00046 Major sigma-70 factor signature 760 775 1.0E-30 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 PRINTS PR00046 Major sigma-70 factor signature 775 786 1.0E-30 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 PRINTS PR00046 Major sigma-70 factor signature 591 604 1.0E-30 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 PRINTS PR00046 Major sigma-70 factor signature 739 751 1.0E-30 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 196 800 41.98 T 19-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 Gene3D G3DSA:1.10.601.10 306 636 6.7E-126 T 19-04-2016 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 Pfam PF04542 Sigma-70 region 2 567 636 2.5E-21 T 19-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS17860 69f0ed2bf946ffb5a6370c99704eea6a 802 Pfam PF04546 Sigma-70, non-essential region 334 536 6.4E-63 T 19-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS20290 a28167869613477b613ee40629af867d 585 SUPERFAMILY SSF51905 110 332 5.01E-30 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS20290 a28167869613477b613ee40629af867d 585 SUPERFAMILY SSF51905 515 570 5.01E-30 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS20290 a28167869613477b613ee40629af867d 585 PIRSF PIRSF038984 7 571 2.5E-220 T 19-04-2016 IPR028348 FAD dependent protein ALIDE2_RS20290 a28167869613477b613ee40629af867d 585 Gene3D G3DSA:3.50.50.60 110 303 4.7E-28 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS20290 a28167869613477b613ee40629af867d 585 Gene3D G3DSA:3.50.50.60 510 565 4.7E-28 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS20290 a28167869613477b613ee40629af867d 585 PANTHER PTHR10617:SF52 85 404 3.3E-160 T 19-04-2016 ALIDE2_RS20290 a28167869613477b613ee40629af867d 585 PANTHER PTHR10617:SF52 507 565 3.3E-160 T 19-04-2016 ALIDE2_RS20290 a28167869613477b613ee40629af867d 585 PANTHER PTHR10617 85 404 3.3E-160 T 19-04-2016 ALIDE2_RS20290 a28167869613477b613ee40629af867d 585 PANTHER PTHR10617 507 565 3.3E-160 T 19-04-2016 ALIDE2_RS21170 c3b174c08224318e488e8332f90ce898 235 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 54 4.9E-9 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS21170 c3b174c08224318e488e8332f90ce898 235 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 62 85 4.9E-9 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS21170 c3b174c08224318e488e8332f90ce898 235 Gene3D G3DSA:1.10.10.60 29 85 9.3E-22 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS21170 c3b174c08224318e488e8332f90ce898 235 Gene3D G3DSA:1.10.357.10 86 221 3.3E-33 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS21170 c3b174c08224318e488e8332f90ce898 235 Pfam PF00440 Bacterial regulatory proteins, tetR family 42 87 5.5E-16 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS21170 c3b174c08224318e488e8332f90ce898 235 SUPERFAMILY SSF46689 30 112 5.64E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS21170 c3b174c08224318e488e8332f90ce898 235 ProSitePatterns PS01081 TetR-type HTH domain signature. 53 84 - T 19-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ALIDE2_RS21170 c3b174c08224318e488e8332f90ce898 235 PANTHER PTHR30055 25 227 5.0E-32 T 19-04-2016 ALIDE2_RS21170 c3b174c08224318e488e8332f90ce898 235 SUPERFAMILY SSF48498 108 218 2.72E-17 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS07695 54058119215eb14614cbde6a6c3b894a 497 PANTHER PTHR11699 5 497 5.3E-241 T 19-04-2016 ALIDE2_RS07695 54058119215eb14614cbde6a6c3b894a 497 PANTHER PTHR11699:SF211 5 497 5.3E-241 T 19-04-2016 ALIDE2_RS07695 54058119215eb14614cbde6a6c3b894a 497 Pfam PF00171 Aldehyde dehydrogenase family 33 493 9.3E-175 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS07695 54058119215eb14614cbde6a6c3b894a 497 Gene3D G3DSA:3.40.605.10 26 283 2.6E-102 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS07695 54058119215eb14614cbde6a6c3b894a 497 SUPERFAMILY SSF53720 24 496 4.71E-171 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS07695 54058119215eb14614cbde6a6c3b894a 497 Gene3D G3DSA:3.40.309.10 284 468 8.0E-67 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS17165 636ab1dd9b1e1df3d868ea0345b2d947 174 PANTHER PTHR35089 6 173 2.1E-38 T 19-04-2016 ALIDE2_RS17165 636ab1dd9b1e1df3d868ea0345b2d947 174 Gene3D G3DSA:3.30.910.20 101 167 1.6E-34 T 19-04-2016 ALIDE2_RS17165 636ab1dd9b1e1df3d868ea0345b2d947 174 Gene3D G3DSA:3.30.910.20 17 63 1.6E-34 T 19-04-2016 ALIDE2_RS17165 636ab1dd9b1e1df3d868ea0345b2d947 174 PIRSF PIRSF002094 1 169 1.3E-52 T 19-04-2016 IPR005632 Chaperone protein Skp GO:0051082 ALIDE2_RS17165 636ab1dd9b1e1df3d868ea0345b2d947 174 SMART SM00935 15 167 3.0E-57 T 19-04-2016 IPR005632 Chaperone protein Skp GO:0051082 ALIDE2_RS17165 636ab1dd9b1e1df3d868ea0345b2d947 174 Pfam PF03938 Outer membrane protein (OmpH-like) 13 166 1.4E-35 T 19-04-2016 IPR005632 Chaperone protein Skp GO:0051082 ALIDE2_RS17165 636ab1dd9b1e1df3d868ea0345b2d947 174 SUPERFAMILY SSF111384 26 167 4.97E-34 T 19-04-2016 IPR024930 Skp domain ALIDE2_RS17165 636ab1dd9b1e1df3d868ea0345b2d947 174 PANTHER PTHR35089:SF1 6 173 2.1E-38 T 19-04-2016 ALIDE2_RS17670 4a4ea44a4d1ad82dd18b3d4c1fe257d0 388 PANTHER PTHR34296 36 375 1.5E-121 T 19-04-2016 ALIDE2_RS17670 4a4ea44a4d1ad82dd18b3d4c1fe257d0 388 Gene3D G3DSA:3.40.50.2300 160 315 1.6E-47 T 19-04-2016 ALIDE2_RS17670 4a4ea44a4d1ad82dd18b3d4c1fe257d0 388 Pfam PF02608 Basic membrane protein 55 322 1.3E-54 T 19-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 ALIDE2_RS17670 4a4ea44a4d1ad82dd18b3d4c1fe257d0 388 PANTHER PTHR34296:SF1 36 375 1.5E-121 T 19-04-2016 ALIDE2_RS20045 616faa7174a446354d728961dca1b045 273 SUPERFAMILY SSF53335 25 253 3.63E-39 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS20045 616faa7174a446354d728961dca1b045 273 PANTHER PTHR10108:SF889 1 157 4.6E-39 T 19-04-2016 ALIDE2_RS20045 616faa7174a446354d728961dca1b045 273 Gene3D G3DSA:3.40.50.150 35 193 8.9E-37 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS20045 616faa7174a446354d728961dca1b045 273 PANTHER PTHR10108 1 157 4.6E-39 T 19-04-2016 ALIDE2_RS20045 616faa7174a446354d728961dca1b045 273 Pfam PF08241 Methyltransferase domain 54 147 4.1E-22 T 19-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 ALIDE2_RS01365 717cd2398e018619062c0e43c209968e 113 SUPERFAMILY SSF54292 2 92 1.19E-20 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS01365 717cd2398e018619062c0e43c209968e 113 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 83 5.4E-14 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS01365 717cd2398e018619062c0e43c209968e 113 Gene3D G3DSA:3.10.20.30 1 91 1.2E-20 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS01365 717cd2398e018619062c0e43c209968e 113 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 19-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ALIDE2_RS00130 a45a35269f1e900ffe7ad9d9db1c70ca 159 Gene3D G3DSA:3.90.1720.10 37 159 2.4E-38 T 19-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS00130 a45a35269f1e900ffe7ad9d9db1c70ca 159 SUPERFAMILY SSF54001 34 159 2.04E-36 T 19-04-2016 ALIDE2_RS00130 a45a35269f1e900ffe7ad9d9db1c70ca 159 Pfam PF00877 NlpC/P60 family 53 157 3.2E-23 T 19-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS00130 a45a35269f1e900ffe7ad9d9db1c70ca 159 PANTHER PTHR21666 48 158 2.2E-28 T 19-04-2016 ALIDE2_RS18935 187bdc9505ef7f8577d7c6578a2b8087 137 PANTHER PTHR11961:SF5 1 137 1.6E-27 T 19-04-2016 ALIDE2_RS18935 187bdc9505ef7f8577d7c6578a2b8087 137 PRINTS PR00604 Class IA and IB cytochrome C signature 101 111 6.6E-15 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 ALIDE2_RS18935 187bdc9505ef7f8577d7c6578a2b8087 137 PRINTS PR00604 Class IA and IB cytochrome C signature 118 126 6.6E-15 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 ALIDE2_RS18935 187bdc9505ef7f8577d7c6578a2b8087 137 PRINTS PR00604 Class IA and IB cytochrome C signature 41 48 6.6E-15 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 ALIDE2_RS18935 187bdc9505ef7f8577d7c6578a2b8087 137 PRINTS PR00604 Class IA and IB cytochrome C signature 82 98 6.6E-15 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 ALIDE2_RS18935 187bdc9505ef7f8577d7c6578a2b8087 137 PRINTS PR00604 Class IA and IB cytochrome C signature 51 66 6.6E-15 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 ALIDE2_RS18935 187bdc9505ef7f8577d7c6578a2b8087 137 PANTHER PTHR11961 1 137 1.6E-27 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 ALIDE2_RS18935 187bdc9505ef7f8577d7c6578a2b8087 137 Pfam PF00034 Cytochrome c 33 126 1.2E-6 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS18935 187bdc9505ef7f8577d7c6578a2b8087 137 Gene3D G3DSA:1.10.760.10 30 128 7.6E-31 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS18935 187bdc9505ef7f8577d7c6578a2b8087 137 SUPERFAMILY SSF46626 30 127 1.33E-29 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS11930 dfa01a9c91a2cd40f2482bb763ff513d 398 Gene3D G3DSA:3.40.640.10 48 317 2.0E-107 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS11930 dfa01a9c91a2cd40f2482bb763ff513d 398 PRINTS PR00799 Aspartate aminotransferase signature 275 300 7.1E-36 T 19-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ALIDE2_RS11930 dfa01a9c91a2cd40f2482bb763ff513d 398 PRINTS PR00799 Aspartate aminotransferase signature 343 361 7.1E-36 T 19-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ALIDE2_RS11930 dfa01a9c91a2cd40f2482bb763ff513d 398 PRINTS PR00799 Aspartate aminotransferase signature 177 196 7.1E-36 T 19-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ALIDE2_RS11930 dfa01a9c91a2cd40f2482bb763ff513d 398 PRINTS PR00799 Aspartate aminotransferase signature 208 220 7.1E-36 T 19-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ALIDE2_RS11930 dfa01a9c91a2cd40f2482bb763ff513d 398 SUPERFAMILY SSF53383 1 398 1.75E-121 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS11930 dfa01a9c91a2cd40f2482bb763ff513d 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 19-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 ALIDE2_RS11930 dfa01a9c91a2cd40f2482bb763ff513d 398 Pfam PF00155 Aminotransferase class I and II 30 394 1.3E-84 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ALIDE2_RS11930 dfa01a9c91a2cd40f2482bb763ff513d 398 PANTHER PTHR11879 1 398 3.6E-220 T 19-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ALIDE2_RS11930 dfa01a9c91a2cd40f2482bb763ff513d 398 PANTHER PTHR11879:SF11 1 398 3.6E-220 T 19-04-2016 ALIDE2_RS14920 a3dfd8c7d43b572fd15f0df42b9a1bf2 229 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 74 5.3E-13 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ALIDE2_RS14920 a3dfd8c7d43b572fd15f0df42b9a1bf2 229 SUPERFAMILY SSF47616 88 223 3.34E-23 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS14920 a3dfd8c7d43b572fd15f0df42b9a1bf2 229 Gene3D G3DSA:3.40.30.10 2 81 1.8E-17 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS14920 a3dfd8c7d43b572fd15f0df42b9a1bf2 229 SUPERFAMILY SSF52833 1 78 2.86E-17 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS14920 a3dfd8c7d43b572fd15f0df42b9a1bf2 229 PANTHER PTHR11260:SF282 1 227 8.5E-85 T 19-04-2016 ALIDE2_RS14920 a3dfd8c7d43b572fd15f0df42b9a1bf2 229 PANTHER PTHR11260 1 227 8.5E-85 T 19-04-2016 ALIDE2_RS14920 a3dfd8c7d43b572fd15f0df42b9a1bf2 229 Pfam PF00043 Glutathione S-transferase, C-terminal domain 152 213 5.7E-9 T 19-04-2016 IPR004046 Glutathione S-transferase, C-terminal ALIDE2_RS14920 a3dfd8c7d43b572fd15f0df42b9a1bf2 229 Gene3D G3DSA:1.20.1050.10 94 219 1.3E-22 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS18880 8810a0e2cfc1cf5e2eba7b4507d2504a 232 SUPERFAMILY SSF55718 121 220 1.09E-5 T 19-04-2016 IPR003033 SCP2 sterol-binding domain ALIDE2_RS18880 8810a0e2cfc1cf5e2eba7b4507d2504a 232 Gene3D G3DSA:1.10.10.10 6 109 1.9E-29 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18880 8810a0e2cfc1cf5e2eba7b4507d2504a 232 Pfam PF01638 HxlR-like helix-turn-helix 19 106 3.9E-23 T 19-04-2016 IPR002577 Helix-turn-helix, HxlR type ALIDE2_RS18880 8810a0e2cfc1cf5e2eba7b4507d2504a 232 PANTHER PTHR33204:SF9 1 141 1.8E-33 T 19-04-2016 ALIDE2_RS18880 8810a0e2cfc1cf5e2eba7b4507d2504a 232 SUPERFAMILY SSF46785 6 109 3.79E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18880 8810a0e2cfc1cf5e2eba7b4507d2504a 232 PANTHER PTHR33204 1 141 1.8E-33 T 19-04-2016 ALIDE2_RS01580 8a2785f7d20f97b77f8a4fbb0400cfc0 496 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 14 487 90.537 T 19-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS01580 8a2785f7d20f97b77f8a4fbb0400cfc0 496 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 18 487 7.0E-168 T 19-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS01580 8a2785f7d20f97b77f8a4fbb0400cfc0 496 PANTHER PTHR11895 6 493 4.9E-205 T 19-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS01580 8a2785f7d20f97b77f8a4fbb0400cfc0 496 PANTHER PTHR11895:SF7 6 493 4.9E-205 T 19-04-2016 ALIDE2_RS01580 8a2785f7d20f97b77f8a4fbb0400cfc0 496 SUPERFAMILY SSF75304 6 493 1.16E-155 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS01580 8a2785f7d20f97b77f8a4fbb0400cfc0 496 Gene3D G3DSA:3.90.1300.10 6 492 6.8E-175 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS01580 8a2785f7d20f97b77f8a4fbb0400cfc0 496 Pfam PF01425 Amidase 28 476 5.8E-149 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS06785 af20663687ef359f8187087e429799b1 405 Gene3D G3DSA:1.10.760.10 307 391 4.5E-5 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS06785 af20663687ef359f8187087e429799b1 405 SUPERFAMILY SSF46626 308 402 3.06E-5 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS06785 af20663687ef359f8187087e429799b1 405 Pfam PF06181 Protein of unknown function (DUF989) 3 302 2.5E-131 T 19-04-2016 IPR010389 Domain of unknown function DUF989 ALIDE2_RS19635 70b05e0f297c6f76257d58f352305026 385 PANTHER PTHR35457:SF1 102 253 1.4E-51 T 19-04-2016 ALIDE2_RS19635 70b05e0f297c6f76257d58f352305026 385 PANTHER PTHR35457:SF1 19 86 1.4E-51 T 19-04-2016 ALIDE2_RS19635 70b05e0f297c6f76257d58f352305026 385 PANTHER PTHR35457:SF1 276 385 1.4E-51 T 19-04-2016 ALIDE2_RS19635 70b05e0f297c6f76257d58f352305026 385 Pfam PF02628 Cytochrome oxidase assembly protein 48 360 4.6E-76 T 19-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 ALIDE2_RS19635 70b05e0f297c6f76257d58f352305026 385 PANTHER PTHR35457 102 253 1.4E-51 T 19-04-2016 ALIDE2_RS19635 70b05e0f297c6f76257d58f352305026 385 PANTHER PTHR35457 19 86 1.4E-51 T 19-04-2016 ALIDE2_RS19635 70b05e0f297c6f76257d58f352305026 385 PANTHER PTHR35457 276 385 1.4E-51 T 19-04-2016 ALIDE2_RS22490 b0ff2eb322d77f773e3f91f1be5a2eca 325 PANTHER PTHR30349:SF16 17 286 5.6E-114 T 19-04-2016 ALIDE2_RS22490 b0ff2eb322d77f773e3f91f1be5a2eca 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 320 4.6E-94 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22490 b0ff2eb322d77f773e3f91f1be5a2eca 325 PANTHER PTHR30349 17 286 5.6E-114 T 19-04-2016 ALIDE2_RS22490 b0ff2eb322d77f773e3f91f1be5a2eca 325 SUPERFAMILY SSF53850 110 287 1.69E-14 T 19-04-2016 ALIDE2_RS22490 b0ff2eb322d77f773e3f91f1be5a2eca 325 PIRSF PIRSF017082 5 325 6.1E-89 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS19565 3545a815bb12ee03d697f5e805ecbae1 206 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 147 2.2E-18 T 19-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE2_RS19565 3545a815bb12ee03d697f5e805ecbae1 206 Gene3D G3DSA:3.40.50.300 3 201 2.5E-33 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19565 3545a815bb12ee03d697f5e805ecbae1 206 PIRSF PIRSF009320 1 202 9.8E-28 T 19-04-2016 ALIDE2_RS19565 3545a815bb12ee03d697f5e805ecbae1 206 SUPERFAMILY SSF52540 1 192 8.54E-32 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19565 3545a815bb12ee03d697f5e805ecbae1 206 PANTHER PTHR13696 1 195 1.6E-27 T 19-04-2016 ALIDE2_RS04090 0a93ef9bdf28622a3ce142ee2b79f585 220 Pfam PF05494 MlaC protein 39 203 1.4E-54 T 19-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC ALIDE2_RS04090 0a93ef9bdf28622a3ce142ee2b79f585 220 Gene3D G3DSA:1.10.10.640 77 117 5.1E-32 T 19-04-2016 IPR023094 Toluene tolerance protein, alpha-helical ALIDE2_RS04090 0a93ef9bdf28622a3ce142ee2b79f585 220 Gene3D G3DSA:1.10.10.640 178 208 5.1E-32 T 19-04-2016 IPR023094 Toluene tolerance protein, alpha-helical ALIDE2_RS04090 0a93ef9bdf28622a3ce142ee2b79f585 220 PANTHER PTHR36573 5 217 2.4E-39 T 19-04-2016 ALIDE2_RS04090 0a93ef9bdf28622a3ce142ee2b79f585 220 Gene3D G3DSA:3.10.450.50 120 177 2.8E-32 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS04090 0a93ef9bdf28622a3ce142ee2b79f585 220 Gene3D G3DSA:3.10.450.50 31 76 2.8E-32 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS04090 0a93ef9bdf28622a3ce142ee2b79f585 220 PIRSF PIRSF004649 3 215 2.7E-47 T 19-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC ALIDE2_RS22205 23def1f68f555d9243b085a32ea570c7 155 SUPERFAMILY SSF55804 1 149 1.57E-38 T 19-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 ALIDE2_RS22205 23def1f68f555d9243b085a32ea570c7 155 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 19-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- ALIDE2_RS22205 23def1f68f555d9243b085a32ea570c7 155 Gene3D G3DSA:3.40.930.10 1 150 1.9E-40 T 19-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- ALIDE2_RS22205 23def1f68f555d9243b085a32ea570c7 155 PANTHER PTHR30505 1 155 1.3E-42 T 19-04-2016 ALIDE2_RS22205 23def1f68f555d9243b085a32ea570c7 155 PANTHER PTHR30505:SF6 1 155 1.3E-42 T 19-04-2016 ALIDE2_RS22205 23def1f68f555d9243b085a32ea570c7 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 146 2.8E-31 T 19-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- ALIDE2_RS04295 bf6bae2f7edb3a96cd368425abd2a2fa 174 Pfam PF04386 Stringent starvation protein B 9 174 4.2E-37 T 19-04-2016 IPR007481 Stringent starvation protein B ALIDE2_RS04295 bf6bae2f7edb3a96cd368425abd2a2fa 174 Gene3D G3DSA:2.30.30.220 6 108 7.6E-47 T 19-04-2016 IPR007481 Stringent starvation protein B ALIDE2_RS04295 bf6bae2f7edb3a96cd368425abd2a2fa 174 PANTHER PTHR37486 3 174 4.0E-51 T 19-04-2016 ALIDE2_RS04295 bf6bae2f7edb3a96cd368425abd2a2fa 174 PANTHER PTHR37486:SF1 3 174 4.0E-51 T 19-04-2016 ALIDE2_RS04295 bf6bae2f7edb3a96cd368425abd2a2fa 174 SUPERFAMILY SSF101738 8 115 4.84E-45 T 19-04-2016 IPR007481 Stringent starvation protein B ALIDE2_RS23390 1c5eef9c8c35404fa4d1e1a7a097476e 376 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 2 369 47.464 T 19-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 ALIDE2_RS23390 1c5eef9c8c35404fa4d1e1a7a097476e 376 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 14 366 1.0E-135 T 19-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 ALIDE2_RS23390 1c5eef9c8c35404fa4d1e1a7a097476e 376 Pfam PF00561 alpha/beta hydrolase fold 43 355 1.1E-32 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS23390 1c5eef9c8c35404fa4d1e1a7a097476e 376 PANTHER PTHR32268:SF11 4 373 1.2E-164 T 19-04-2016 ALIDE2_RS23390 1c5eef9c8c35404fa4d1e1a7a097476e 376 PIRSF PIRSF000443 2 375 1.1E-136 T 19-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 ALIDE2_RS23390 1c5eef9c8c35404fa4d1e1a7a097476e 376 Gene3D G3DSA:3.40.50.1820 233 368 3.7E-37 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS23390 1c5eef9c8c35404fa4d1e1a7a097476e 376 Gene3D G3DSA:3.40.50.1820 23 200 3.7E-37 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS23390 1c5eef9c8c35404fa4d1e1a7a097476e 376 PANTHER PTHR32268 4 373 1.2E-164 T 19-04-2016 ALIDE2_RS23390 1c5eef9c8c35404fa4d1e1a7a097476e 376 SUPERFAMILY SSF53474 6 368 2.07E-102 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS14485 d66dc9678e9d8f2c2798cf4e1cd3a974 175 Gene3D G3DSA:3.30.160.70 12 82 5.1E-4 T 19-04-2016 ALIDE2_RS14485 d66dc9678e9d8f2c2798cf4e1cd3a974 175 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 86 165 8.1E-32 T 19-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 ALIDE2_RS14485 d66dc9678e9d8f2c2798cf4e1cd3a974 175 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 136 142 - T 19-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 ALIDE2_RS14485 d66dc9678e9d8f2c2798cf4e1cd3a974 175 Gene3D G3DSA:1.10.10.10 85 166 5.1E-34 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14485 d66dc9678e9d8f2c2798cf4e1cd3a974 175 SUPERFAMILY SSF46767 85 166 7.19E-31 T 19-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 ALIDE2_RS14485 d66dc9678e9d8f2c2798cf4e1cd3a974 175 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 87 165 3.3E-32 T 19-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 ALIDE2_RS14485 d66dc9678e9d8f2c2798cf4e1cd3a974 175 PANTHER PTHR10815 14 165 5.0E-47 T 19-04-2016 ALIDE2_RS14485 d66dc9678e9d8f2c2798cf4e1cd3a974 175 PANTHER PTHR10815:SF5 14 165 5.0E-47 T 19-04-2016 ALIDE2_RS14485 d66dc9678e9d8f2c2798cf4e1cd3a974 175 SUPERFAMILY SSF53155 9 90 2.94E-14 T 19-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 ALIDE2_RS16185 93d991cb8b1e0cef30351dd7980d638e 570 PANTHER PTHR22773 7 370 8.4E-98 T 19-04-2016 ALIDE2_RS16185 93d991cb8b1e0cef30351dd7980d638e 570 PANTHER PTHR22773 402 551 8.4E-98 T 19-04-2016 ALIDE2_RS16185 93d991cb8b1e0cef30351dd7980d638e 570 Pfam PF00361 Proton-conducting membrane transporter 142 366 9.3E-24 T 19-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 ALIDE2_RS16185 93d991cb8b1e0cef30351dd7980d638e 570 PANTHER PTHR22773:SF49 7 370 8.4E-98 T 19-04-2016 ALIDE2_RS16185 93d991cb8b1e0cef30351dd7980d638e 570 PANTHER PTHR22773:SF49 402 551 8.4E-98 T 19-04-2016 ALIDE2_RS02480 90b44c3ceed9972ff5bc8e4a107c5c15 415 SUPERFAMILY SSF56801 113 385 1.31E-34 T 19-04-2016 ALIDE2_RS02480 90b44c3ceed9972ff5bc8e4a107c5c15 415 PANTHER PTHR36932:SF1 1 368 1.5E-72 T 19-04-2016 ALIDE2_RS02480 90b44c3ceed9972ff5bc8e4a107c5c15 415 Pfam PF00501 AMP-binding enzyme 124 280 4.2E-12 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS02480 90b44c3ceed9972ff5bc8e4a107c5c15 415 Gene3D G3DSA:3.30.300.30 318 404 2.9E-13 T 19-04-2016 ALIDE2_RS02480 90b44c3ceed9972ff5bc8e4a107c5c15 415 Gene3D G3DSA:3.40.50.980 120 242 1.8E-8 T 19-04-2016 ALIDE2_RS02480 90b44c3ceed9972ff5bc8e4a107c5c15 415 PANTHER PTHR36932 1 368 1.5E-72 T 19-04-2016 ALIDE2_RS22335 48e429407ee45b3e59b1692006663b3e 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 319 3.2E-79 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22335 48e429407ee45b3e59b1692006663b3e 323 PANTHER PTHR30349:SF16 8 294 3.9E-87 T 19-04-2016 ALIDE2_RS22335 48e429407ee45b3e59b1692006663b3e 323 PIRSF PIRSF017082 2 323 3.2E-83 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22335 48e429407ee45b3e59b1692006663b3e 323 SUPERFAMILY SSF53850 106 286 6.33E-14 T 19-04-2016 ALIDE2_RS22335 48e429407ee45b3e59b1692006663b3e 323 PANTHER PTHR30349 8 294 3.9E-87 T 19-04-2016 ALIDE2_RS05955 761664cbe140e7447eba66ff7e696bb8 370 PANTHER PTHR11079 7 231 2.2E-50 T 19-04-2016 ALIDE2_RS05955 761664cbe140e7447eba66ff7e696bb8 370 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 103 8.6E-18 T 19-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 ALIDE2_RS05955 761664cbe140e7447eba66ff7e696bb8 370 PIRSF PIRSF006769 1 366 2.2E-114 T 19-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 ALIDE2_RS05955 761664cbe140e7447eba66ff7e696bb8 370 SUPERFAMILY SSF53927 7 147 2.51E-40 T 19-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 ALIDE2_RS05955 761664cbe140e7447eba66ff7e696bb8 370 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 93 - T 19-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ALIDE2_RS05955 761664cbe140e7447eba66ff7e696bb8 370 Pfam PF01872 RibD C-terminal domain 152 358 1.7E-44 T 19-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ALIDE2_RS05955 761664cbe140e7447eba66ff7e696bb8 370 SUPERFAMILY SSF53597 150 362 5.56E-60 T 19-04-2016 IPR024072 Dihydrofolate reductase-like domain ALIDE2_RS05955 761664cbe140e7447eba66ff7e696bb8 370 PANTHER PTHR11079:SF10 7 231 2.2E-50 T 19-04-2016 ALIDE2_RS05955 761664cbe140e7447eba66ff7e696bb8 370 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 9 360 1.1E-100 T 19-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 ALIDE2_RS05955 761664cbe140e7447eba66ff7e696bb8 370 Gene3D G3DSA:3.40.140.10 7 133 1.6E-28 T 19-04-2016 ALIDE2_RS05955 761664cbe140e7447eba66ff7e696bb8 370 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 363 1.4E-51 T 19-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 ALIDE2_RS05955 761664cbe140e7447eba66ff7e696bb8 370 Gene3D G3DSA:3.40.430.10 134 362 1.6E-71 T 19-04-2016 IPR024072 Dihydrofolate reductase-like domain ALIDE2_RS06050 df804783a178e8ed1d811ab3956d0d95 333 PANTHER PTHR11732:SF273 1 333 2.5E-131 T 19-04-2016 ALIDE2_RS06050 df804783a178e8ed1d811ab3956d0d95 333 PRINTS PR00069 Aldo-keto reductase signature 103 121 2.3E-5 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ALIDE2_RS06050 df804783a178e8ed1d811ab3956d0d95 333 PRINTS PR00069 Aldo-keto reductase signature 134 151 2.3E-5 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ALIDE2_RS06050 df804783a178e8ed1d811ab3956d0d95 333 PRINTS PR00069 Aldo-keto reductase signature 39 63 2.3E-5 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ALIDE2_RS06050 df804783a178e8ed1d811ab3956d0d95 333 SUPERFAMILY SSF51430 1 311 9.56E-97 T 19-04-2016 IPR023210 NADP-dependent oxidoreductase domain ALIDE2_RS06050 df804783a178e8ed1d811ab3956d0d95 333 Pfam PF00248 Aldo/keto reductase family 16 309 3.0E-67 T 19-04-2016 IPR023210 NADP-dependent oxidoreductase domain ALIDE2_RS06050 df804783a178e8ed1d811ab3956d0d95 333 PANTHER PTHR11732 1 333 2.5E-131 T 19-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta ALIDE2_RS06050 df804783a178e8ed1d811ab3956d0d95 333 Gene3D G3DSA:3.20.20.100 1 310 8.0E-94 T 19-04-2016 IPR023210 NADP-dependent oxidoreductase domain ALIDE2_RS21725 19e386cbb2292e1e61ddc1135bb610a2 301 Pfam PF03466 LysR substrate binding domain 93 299 9.2E-39 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS21725 19e386cbb2292e1e61ddc1135bb610a2 301 PANTHER PTHR30419:SF3 1 295 2.0E-61 T 19-04-2016 ALIDE2_RS21725 19e386cbb2292e1e61ddc1135bb610a2 301 PANTHER PTHR30419 1 295 2.0E-61 T 19-04-2016 ALIDE2_RS21725 19e386cbb2292e1e61ddc1135bb610a2 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 2.0E-21 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS21725 19e386cbb2292e1e61ddc1135bb610a2 301 Gene3D G3DSA:3.40.190.10 181 267 7.2E-23 T 19-04-2016 ALIDE2_RS21725 19e386cbb2292e1e61ddc1135bb610a2 301 SUPERFAMILY SSF46785 9 114 3.01E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS21725 19e386cbb2292e1e61ddc1135bb610a2 301 Gene3D G3DSA:1.10.10.10 9 84 5.5E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS21725 19e386cbb2292e1e61ddc1135bb610a2 301 SUPERFAMILY SSF53850 95 300 3.8E-37 T 19-04-2016 ALIDE2_RS21725 19e386cbb2292e1e61ddc1135bb610a2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.1E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS21725 19e386cbb2292e1e61ddc1135bb610a2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.1E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS21725 19e386cbb2292e1e61ddc1135bb610a2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.1E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS21725 19e386cbb2292e1e61ddc1135bb610a2 301 Gene3D G3DSA:3.40.190.10 95 180 1.5E-14 T 19-04-2016 ALIDE2_RS06200 c94d6a749163002edf4a868fa392d989 408 Pfam PF02515 CoA-transferase family III 6 384 6.7E-132 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS06200 c94d6a749163002edf4a868fa392d989 408 Gene3D G3DSA:3.40.50.10540 317 408 9.9E-120 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS06200 c94d6a749163002edf4a868fa392d989 408 Gene3D G3DSA:3.40.50.10540 2 228 9.9E-120 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS06200 c94d6a749163002edf4a868fa392d989 408 PANTHER PTHR24023 33 395 8.3E-39 T 19-04-2016 ALIDE2_RS06200 c94d6a749163002edf4a868fa392d989 408 Gene3D G3DSA:3.30.1540.10 234 316 3.3E-33 T 19-04-2016 ALIDE2_RS06200 c94d6a749163002edf4a868fa392d989 408 PANTHER PTHR24023:SF593 33 395 8.3E-39 T 19-04-2016 ALIDE2_RS06200 c94d6a749163002edf4a868fa392d989 408 SUPERFAMILY SSF89796 4 408 4.58E-142 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS13730 eb1c738f214227a0f35ee5854a6aa0fc 379 SUPERFAMILY SSF56349 64 324 4.41E-8 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS13730 eb1c738f214227a0f35ee5854a6aa0fc 379 Pfam PF12834 Phage integrase, N-terminal 63 142 1.6E-7 T 19-04-2016 IPR024457 Putative integrase, N-terminal ALIDE2_RS13730 eb1c738f214227a0f35ee5854a6aa0fc 379 Pfam PF12835 Integrase 177 310 2.6E-6 T 19-04-2016 IPR024456 Integrase catalytic domain, putative ALIDE2_RS13730 eb1c738f214227a0f35ee5854a6aa0fc 379 Gene3D G3DSA:1.10.150.130 61 144 6.0E-6 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 SUPERFAMILY SSF52540 1020 1215 1.22E-37 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 SUPERFAMILY SSF52540 1392 1514 1.22E-37 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 SMART SM00382 657 945 0.69 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 SMART SM00382 1613 1943 2.5 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 SMART SM00382 1034 1509 3.6 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:3.40.50.300 634 716 5.6E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:3.40.50.300 504 617 1.6E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:3.40.50.300 1423 1545 5.4E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:3.40.50.300 1010 1069 5.4E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:3.40.50.300 3 53 1.6E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:3.40.50.300 1814 1934 1.3E-48 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:3.40.50.300 849 980 5.6E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:3.40.50.300 1601 1653 1.3E-48 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:1.20.1580.10 246 279 1.4E-37 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:1.20.1580.10 1105 1140 5.5E-50 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:1.20.1580.10 1347 1422 5.5E-50 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:1.20.1580.10 94 131 1.4E-37 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:1.20.1580.10 441 503 1.4E-37 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:1.20.1580.10 392 409 1.4E-37 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:1.20.1580.10 1275 1308 5.5E-50 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 SUPERFAMILY SSF52540 1672 1916 2.67E-39 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 SUPERFAMILY SSF52540 1602 1642 2.67E-39 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:1.20.1580.10 718 848 2.4E-38 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:1.20.1580.10 1687 1813 1.6E-50 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 PANTHER PTHR32282:SF2 2 409 0.0 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 PANTHER PTHR32282:SF2 441 523 0.0 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 PANTHER PTHR32282:SF2 1589 1645 0.0 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 PANTHER PTHR32282:SF2 1436 1550 0.0 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 PANTHER PTHR32282:SF2 1668 1943 0.0 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 SUPERFAMILY SSF52540 643 952 8.04E-35 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:3.30.1490.20 194 234 5.6E-4 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 PANTHER PTHR32282 2 409 0.0 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 PANTHER PTHR32282 441 523 0.0 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 PANTHER PTHR32282 1589 1645 0.0 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 PANTHER PTHR32282 1436 1550 0.0 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 PANTHER PTHR32282 1668 1943 0.0 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 SUPERFAMILY SSF52540 479 595 4.87E-37 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 Gene3D G3DSA:1.10.8.280 281 391 7.2E-22 T 19-04-2016 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 963 1.5E-275 T 19-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 SUPERFAMILY SSF52540 6 187 4.87E-37 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 ProSitePatterns PS00211 ABC transporters family signature. 1823 1837 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 ProSitePatterns PS00211 ABC transporters family signature. 858 872 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS20465 b6cbc4b46f1ebf52430ac3859e54a298 1944 ProSitePatterns PS00211 ABC transporters family signature. 1432 1446 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS07650 bdff59b12693b0deac5c751fc0a0e8ba 297 PANTHER PTHR30482:SF10 8 297 1.0E-60 T 19-04-2016 ALIDE2_RS07650 bdff59b12693b0deac5c751fc0a0e8ba 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 259 4.9E-31 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS07650 bdff59b12693b0deac5c751fc0a0e8ba 297 PANTHER PTHR30482 8 297 1.0E-60 T 19-04-2016 ALIDE2_RS07650 bdff59b12693b0deac5c751fc0a0e8ba 297 Gene3D G3DSA:1.10.3470.10 36 190 1.5E-4 T 19-04-2016 IPR029022 ABC transporter, BtuC-like ALIDE2_RS01610 96285e053e922d3e41c929cf51d3ee76 303 ProSitePatterns PS01053 Arginase family signature. 225 246 - T 19-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 ALIDE2_RS01610 96285e053e922d3e41c929cf51d3ee76 303 Pfam PF00491 Arginase family 4 295 6.7E-74 T 19-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 ALIDE2_RS01610 96285e053e922d3e41c929cf51d3ee76 303 TIGRFAM TIGR01229 rocF_arginase: arginase 6 299 4.5E-89 T 19-04-2016 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: REACT_13|UniPathway: UPA00158 ALIDE2_RS01610 96285e053e922d3e41c929cf51d3ee76 303 PANTHER PTHR11358 4 297 4.7E-102 T 19-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 ALIDE2_RS01610 96285e053e922d3e41c929cf51d3ee76 303 Gene3D G3DSA:3.40.800.10 4 297 8.9E-85 T 19-04-2016 IPR023696 Ureohydrolase domain ALIDE2_RS01610 96285e053e922d3e41c929cf51d3ee76 303 PIRSF PIRSF036979 2 299 5.2E-31 T 19-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 ALIDE2_RS01610 96285e053e922d3e41c929cf51d3ee76 303 PRINTS PR00116 Arginase signature 120 147 3.5E-43 T 19-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 ALIDE2_RS01610 96285e053e922d3e41c929cf51d3ee76 303 PRINTS PR00116 Arginase signature 257 271 3.5E-43 T 19-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 ALIDE2_RS01610 96285e053e922d3e41c929cf51d3ee76 303 PRINTS PR00116 Arginase signature 93 108 3.5E-43 T 19-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 ALIDE2_RS01610 96285e053e922d3e41c929cf51d3ee76 303 PRINTS PR00116 Arginase signature 174 192 3.5E-43 T 19-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 ALIDE2_RS01610 96285e053e922d3e41c929cf51d3ee76 303 PRINTS PR00116 Arginase signature 222 251 3.5E-43 T 19-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 ALIDE2_RS01610 96285e053e922d3e41c929cf51d3ee76 303 PANTHER PTHR11358:SF2 4 297 4.7E-102 T 19-04-2016 ALIDE2_RS01610 96285e053e922d3e41c929cf51d3ee76 303 SUPERFAMILY SSF52768 4 300 1.98E-84 T 19-04-2016 ALIDE2_RS21570 f6ee7fabb96ad698d1ef0d1d12b85e21 129 Pfam PF01196 Ribosomal protein L17 20 116 8.5E-35 T 19-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21570 f6ee7fabb96ad698d1ef0d1d12b85e21 129 SUPERFAMILY SSF64263 1 118 4.71E-50 T 19-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21570 f6ee7fabb96ad698d1ef0d1d12b85e21 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 19-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21570 f6ee7fabb96ad698d1ef0d1d12b85e21 129 Gene3D G3DSA:3.90.1030.10 1 117 2.3E-50 T 19-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21570 f6ee7fabb96ad698d1ef0d1d12b85e21 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.538 T 19-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21570 f6ee7fabb96ad698d1ef0d1d12b85e21 129 PANTHER PTHR14413 1 121 1.3E-62 T 19-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21570 f6ee7fabb96ad698d1ef0d1d12b85e21 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 3.5E-46 T 19-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS05570 3d87669d29a14ac0e5a3699344dfbdc7 517 Gene3D G3DSA:3.40.50.980 173 319 1.6E-43 T 19-04-2016 ALIDE2_RS05570 3d87669d29a14ac0e5a3699344dfbdc7 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 427 502 3.4E-14 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS05570 3d87669d29a14ac0e5a3699344dfbdc7 517 PANTHER PTHR24096:SF206 5 511 1.3E-199 T 19-04-2016 ALIDE2_RS05570 3d87669d29a14ac0e5a3699344dfbdc7 517 Pfam PF00501 AMP-binding enzyme 31 418 4.7E-96 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS05570 3d87669d29a14ac0e5a3699344dfbdc7 517 Gene3D G3DSA:3.30.300.30 413 512 8.5E-29 T 19-04-2016 ALIDE2_RS05570 3d87669d29a14ac0e5a3699344dfbdc7 517 PANTHER PTHR24096 5 511 1.3E-199 T 19-04-2016 ALIDE2_RS05570 3d87669d29a14ac0e5a3699344dfbdc7 517 SUPERFAMILY SSF56801 7 515 2.09E-147 T 19-04-2016 ALIDE2_RS05570 3d87669d29a14ac0e5a3699344dfbdc7 517 Gene3D G3DSA:2.30.38.10 337 412 3.3E-30 T 19-04-2016 ALIDE2_RS05570 3d87669d29a14ac0e5a3699344dfbdc7 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 167 178 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS05570 3d87669d29a14ac0e5a3699344dfbdc7 517 Gene3D G3DSA:3.40.50.980 19 172 2.8E-32 T 19-04-2016 ALIDE2_RS05795 3429b4999b16683f86d70a71164d1e60 388 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS05795 3429b4999b16683f86d70a71164d1e60 388 SUPERFAMILY SSF47203 233 386 6.77E-50 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS05795 3429b4999b16683f86d70a71164d1e60 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 385 1.6E-43 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS05795 3429b4999b16683f86d70a71164d1e60 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 118 2.0E-17 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS05795 3429b4999b16683f86d70a71164d1e60 388 Gene3D G3DSA:1.20.140.10 227 386 2.2E-59 T 19-04-2016 ALIDE2_RS05795 3429b4999b16683f86d70a71164d1e60 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 223 5.6E-16 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS05795 3429b4999b16683f86d70a71164d1e60 388 Gene3D G3DSA:2.40.110.10 131 226 6.0E-25 T 19-04-2016 ALIDE2_RS05795 3429b4999b16683f86d70a71164d1e60 388 PANTHER PTHR10909 4 386 4.7E-108 T 19-04-2016 ALIDE2_RS05795 3429b4999b16683f86d70a71164d1e60 388 SUPERFAMILY SSF56645 6 245 2.75E-52 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS05795 3429b4999b16683f86d70a71164d1e60 388 Gene3D G3DSA:1.10.540.10 6 125 3.0E-20 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS11545 375050f008666d93aa20b36a959b83dd 383 SUPERFAMILY SSF111369 56 288 2.35E-14 T 19-04-2016 ALIDE2_RS11545 375050f008666d93aa20b36a959b83dd 383 Gene3D G3DSA:2.40.50.100 65 97 7.1E-14 T 19-04-2016 ALIDE2_RS11545 375050f008666d93aa20b36a959b83dd 383 Gene3D G3DSA:2.40.50.100 186 217 7.1E-14 T 19-04-2016 ALIDE2_RS11545 375050f008666d93aa20b36a959b83dd 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 374 1.5E-46 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ALIDE2_RS11545 375050f008666d93aa20b36a959b83dd 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 273 1.6E-16 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS11545 375050f008666d93aa20b36a959b83dd 383 PANTHER PTHR30469 1 383 4.3E-41 T 19-04-2016 ALIDE2_RS05725 310d96ee4bd78929bbc869d91bfad523 253 SUPERFAMILY SSF51735 8 250 2.02E-77 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS05725 310d96ee4bd78929bbc869d91bfad523 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.7E-43 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05725 310d96ee4bd78929bbc869d91bfad523 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.7E-43 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05725 310d96ee4bd78929bbc869d91bfad523 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.7E-43 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05725 310d96ee4bd78929bbc869d91bfad523 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.7E-43 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05725 310d96ee4bd78929bbc869d91bfad523 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.7E-43 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05725 310d96ee4bd78929bbc869d91bfad523 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.7E-43 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05725 310d96ee4bd78929bbc869d91bfad523 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 3.1E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05725 310d96ee4bd78929bbc869d91bfad523 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.1E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05725 310d96ee4bd78929bbc869d91bfad523 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.1E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05725 310d96ee4bd78929bbc869d91bfad523 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 249 7.5E-61 T 19-04-2016 ALIDE2_RS05725 310d96ee4bd78929bbc869d91bfad523 253 PANTHER PTHR24321 7 252 2.1E-51 T 19-04-2016 ALIDE2_RS05725 310d96ee4bd78929bbc869d91bfad523 253 PANTHER PTHR24321:SF6 7 252 2.1E-51 T 19-04-2016 ALIDE2_RS05725 310d96ee4bd78929bbc869d91bfad523 253 Gene3D G3DSA:3.40.50.720 7 250 5.3E-81 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00790 423df3a910e24df9cbfc3c6d9fab6aac 307 Gene3D G3DSA:3.40.190.10 177 259 5.5E-8 T 19-04-2016 ALIDE2_RS00790 423df3a910e24df9cbfc3c6d9fab6aac 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.0E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00790 423df3a910e24df9cbfc3c6d9fab6aac 307 PANTHER PTHR30537:SF5 1 307 1.8E-77 T 19-04-2016 ALIDE2_RS00790 423df3a910e24df9cbfc3c6d9fab6aac 307 Pfam PF03466 LysR substrate binding domain 88 293 9.9E-32 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS00790 423df3a910e24df9cbfc3c6d9fab6aac 307 PANTHER PTHR30537 1 307 1.8E-77 T 19-04-2016 ALIDE2_RS00790 423df3a910e24df9cbfc3c6d9fab6aac 307 SUPERFAMILY SSF46785 1 110 3.44E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00790 423df3a910e24df9cbfc3c6d9fab6aac 307 SUPERFAMILY SSF53850 89 298 1.25E-32 T 19-04-2016 ALIDE2_RS00790 423df3a910e24df9cbfc3c6d9fab6aac 307 Gene3D G3DSA:3.40.190.10 91 176 9.1E-17 T 19-04-2016 ALIDE2_RS00790 423df3a910e24df9cbfc3c6d9fab6aac 307 Gene3D G3DSA:1.10.10.10 1 86 3.7E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS10505 298e4df3aaf203278790c20787a4b92b 355 PANTHER PTHR11177 33 320 7.0E-87 T 19-04-2016 ALIDE2_RS10505 298e4df3aaf203278790c20787a4b92b 355 Gene3D G3DSA:3.40.50.1820 30 352 7.8E-90 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS10505 298e4df3aaf203278790c20787a4b92b 355 PANTHER PTHR11177:SF162 33 320 7.0E-87 T 19-04-2016 ALIDE2_RS10505 298e4df3aaf203278790c20787a4b92b 355 SUPERFAMILY SSF53474 84 349 3.38E-26 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS18085 400704f05482953345090ee3b12b1a82 325 PIRSF PIRSF036500 1 319 1.0E-168 T 19-04-2016 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 ALIDE2_RS18085 400704f05482953345090ee3b12b1a82 325 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 5 309 7.2E-61 T 19-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 ALIDE2_RS18085 400704f05482953345090ee3b12b1a82 325 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 3 314 7.2E-164 T 19-04-2016 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 ALIDE2_RS18085 400704f05482953345090ee3b12b1a82 325 Hamap MF_01511 GMP reductase [guaC]. 1 323 65.011 T 19-04-2016 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 ALIDE2_RS18085 400704f05482953345090ee3b12b1a82 325 SUPERFAMILY SSF51412 3 311 1.96E-85 T 19-04-2016 ALIDE2_RS18085 400704f05482953345090ee3b12b1a82 325 PANTHER PTHR11911:SF97 31 150 7.1E-131 T 19-04-2016 ALIDE2_RS18085 400704f05482953345090ee3b12b1a82 325 PANTHER PTHR11911:SF97 168 313 7.1E-131 T 19-04-2016 ALIDE2_RS18085 400704f05482953345090ee3b12b1a82 325 Gene3D G3DSA:3.20.20.70 4 315 6.3E-79 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS18085 400704f05482953345090ee3b12b1a82 325 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 163 175 - T 19-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 ALIDE2_RS18085 400704f05482953345090ee3b12b1a82 325 PANTHER PTHR11911 31 150 7.1E-131 T 19-04-2016 ALIDE2_RS18085 400704f05482953345090ee3b12b1a82 325 PANTHER PTHR11911 168 313 7.1E-131 T 19-04-2016 ALIDE2_RS18085 400704f05482953345090ee3b12b1a82 325 SMART SM01240 2 322 6.7E-92 T 19-04-2016 ALIDE2_RS23730 6c64baf5f28c4834b4949d55119f95e8 122 PANTHER PTHR33121:SF13 6 122 1.2E-31 T 19-04-2016 ALIDE2_RS23730 6c64baf5f28c4834b4949d55119f95e8 122 SUPERFAMILY SSF141868 5 121 1.22E-38 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS23730 6c64baf5f28c4834b4949d55119f95e8 122 PANTHER PTHR33121 6 122 1.2E-31 T 19-04-2016 ALIDE2_RS23730 6c64baf5f28c4834b4949d55119f95e8 122 Pfam PF00563 EAL domain 6 121 5.4E-30 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS23730 6c64baf5f28c4834b4949d55119f95e8 122 Gene3D G3DSA:3.20.20.450 5 121 4.2E-43 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS23730 6c64baf5f28c4834b4949d55119f95e8 122 SMART SM00052 2 121 4.9E-8 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 Pfam PF00702 haloacid dehalogenase-like hydrolase 494 711 4.1E-40 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 Pfam PF00122 E1-E2 ATPase 266 489 8.7E-66 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 PANTHER PTHR24093 137 807 5.3E-219 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 SUPERFAMILY SSF56784 555 804 3.74E-55 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 SUPERFAMILY SSF56784 496 516 3.74E-55 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 SUPERFAMILY SSF81665 264 299 1.2E-12 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 SUPERFAMILY SSF81665 746 764 1.2E-12 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 SUPERFAMILY SSF81665 397 492 1.2E-12 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 205 807 9.0E-175 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 267 775 3.5E-85 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 Gene3D G3DSA:3.40.1110.10 514 624 4.1E-20 T 19-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 Gene3D G3DSA:2.70.150.10 243 396 1.2E-30 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 622 633 2.7E-28 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 346 360 2.7E-28 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 644 654 2.7E-28 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 498 512 2.7E-28 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 697 716 2.7E-28 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 720 732 2.7E-28 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 PRINTS PR00943 Copper-transporting ATPase signature 208 227 1.9E-17 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 PRINTS PR00943 Copper-transporting ATPase signature 674 691 1.9E-17 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 PRINTS PR00943 Copper-transporting ATPase signature 285 303 1.9E-17 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 PRINTS PR00943 Copper-transporting ATPase signature 265 284 1.9E-17 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 PRINTS PR00943 Copper-transporting ATPase signature 419 433 1.9E-17 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 PRINTS PR00943 Copper-transporting ATPase signature 770 784 1.9E-17 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 PRINTS PR00943 Copper-transporting ATPase signature 481 496 1.9E-17 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 SUPERFAMILY SSF81653 299 396 5.75E-27 T 19-04-2016 ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 Gene3D G3DSA:3.40.50.1000 469 513 6.2E-51 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 Gene3D G3DSA:3.40.50.1000 625 764 6.2E-51 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 500 506 - T 19-04-2016 IPR018303 P-type ATPase, phosphorylation site ALIDE2_RS10935 c2600bbd9bb8737453abb9d058696d33 822 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 223 806 1.2E-182 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS17435 1e88958a39b09d0c2303d23fddde91ea 232 PANTHER PTHR30050:SF5 1 230 2.6E-33 T 19-04-2016 ALIDE2_RS17435 1e88958a39b09d0c2303d23fddde91ea 232 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 3 230 6.8E-61 T 19-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 ALIDE2_RS17435 1e88958a39b09d0c2303d23fddde91ea 232 Gene3D G3DSA:1.10.8.60 167 230 1.7E-25 T 19-04-2016 ALIDE2_RS17435 1e88958a39b09d0c2303d23fddde91ea 232 Gene3D G3DSA:3.40.50.300 1 161 4.3E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17435 1e88958a39b09d0c2303d23fddde91ea 232 Pfam PF00308 Bacterial dnaA protein 125 210 1.6E-6 T 19-04-2016 IPR013317 Chromosomal replication initiator protein DnaA ALIDE2_RS17435 1e88958a39b09d0c2303d23fddde91ea 232 Pfam PF00308 Bacterial dnaA protein 19 81 4.6E-5 T 19-04-2016 IPR013317 Chromosomal replication initiator protein DnaA ALIDE2_RS17435 1e88958a39b09d0c2303d23fddde91ea 232 SUPERFAMILY SSF52540 24 216 9.71E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17435 1e88958a39b09d0c2303d23fddde91ea 232 PANTHER PTHR30050 1 230 2.6E-33 T 19-04-2016 ALIDE2_RS01015 8e05553d2b97111618ce456cda48a392 299 Pfam PF03631 Virulence factor BrkB 28 287 1.9E-47 T 19-04-2016 IPR017039 Virulence factor BrkB ALIDE2_RS01015 8e05553d2b97111618ce456cda48a392 299 PANTHER PTHR30213:SF1 18 278 1.5E-36 T 19-04-2016 ALIDE2_RS01015 8e05553d2b97111618ce456cda48a392 299 PIRSF PIRSF035875 5 298 9.8E-52 T 19-04-2016 IPR017039 Virulence factor BrkB ALIDE2_RS01015 8e05553d2b97111618ce456cda48a392 299 PANTHER PTHR30213 18 278 1.5E-36 T 19-04-2016 ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 Gene3D G3DSA:2.40.50.140 350 419 3.7E-24 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 SUPERFAMILY SSF53955 46 256 5.34E-73 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 Gene3D G3DSA:3.40.710.10 236 316 3.9E-135 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 Gene3D G3DSA:3.40.710.10 420 731 3.9E-135 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 Pfam PF00912 Transglycosylase 59 232 6.9E-62 T 19-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 Gene3D G3DSA:1.10.3810.10 61 235 2.5E-72 T 19-04-2016 ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 Pfam PF17092 Penicillin-binding protein OB-like domain 319 423 3.8E-21 T 19-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 SUPERFAMILY SSF56601 420 736 1.01E-125 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 SUPERFAMILY SSF56601 214 236 1.01E-125 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 SUPERFAMILY SSF56601 265 316 1.01E-125 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 PANTHER PTHR32282:SF5 419 723 2.7E-236 T 19-04-2016 ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 PANTHER PTHR32282:SF5 1 313 2.7E-236 T 19-04-2016 ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 PANTHER PTHR32282 419 723 2.7E-236 T 19-04-2016 ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 PANTHER PTHR32282 1 313 2.7E-236 T 19-04-2016 ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 Pfam PF00905 Penicillin binding protein transpeptidase domain 425 694 1.3E-44 T 19-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ALIDE2_RS03955 4d8651a6520b16c8690e49f389661474 771 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 69 709 7.9E-190 T 19-04-2016 ALIDE2_RS07255 e2d3d5e31a0ebe7f7b477da9d71dcf8b 474 Gene3D G3DSA:3.30.465.10 96 217 1.1E-39 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ALIDE2_RS07255 e2d3d5e31a0ebe7f7b477da9d71dcf8b 474 Pfam PF01565 FAD binding domain 40 177 2.8E-36 T 19-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ALIDE2_RS07255 e2d3d5e31a0ebe7f7b477da9d71dcf8b 474 Gene3D G3DSA:1.10.45.10 432 469 7.9E-15 T 19-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ALIDE2_RS07255 e2d3d5e31a0ebe7f7b477da9d71dcf8b 474 PANTHER PTHR11748:SF76 1 472 4.8E-183 T 19-04-2016 ALIDE2_RS07255 e2d3d5e31a0ebe7f7b477da9d71dcf8b 474 PANTHER PTHR11748 1 472 4.8E-183 T 19-04-2016 ALIDE2_RS07255 e2d3d5e31a0ebe7f7b477da9d71dcf8b 474 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 469 4.1E-50 T 19-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ALIDE2_RS07255 e2d3d5e31a0ebe7f7b477da9d71dcf8b 474 SUPERFAMILY SSF55103 190 472 1.8E-57 T 19-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ALIDE2_RS07255 e2d3d5e31a0ebe7f7b477da9d71dcf8b 474 SUPERFAMILY SSF56176 4 217 8.56E-78 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS07255 e2d3d5e31a0ebe7f7b477da9d71dcf8b 474 Gene3D G3DSA:3.30.43.10 2 95 1.0E-23 T 19-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 ALIDE2_RS01100 4c1cc92bcbdc63ca4290f50305062b53 296 Gene3D G3DSA:1.10.1040.10 164 290 2.1E-34 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS01100 4c1cc92bcbdc63ca4290f50305062b53 296 SUPERFAMILY SSF48179 163 290 5.21E-31 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS01100 4c1cc92bcbdc63ca4290f50305062b53 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 161 2.5E-34 T 19-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 ALIDE2_RS01100 4c1cc92bcbdc63ca4290f50305062b53 296 Gene3D G3DSA:3.40.50.720 1 161 4.3E-45 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS01100 4c1cc92bcbdc63ca4290f50305062b53 296 PANTHER PTHR22981 1 290 2.3E-77 T 19-04-2016 ALIDE2_RS01100 4c1cc92bcbdc63ca4290f50305062b53 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 282 4.0E-30 T 19-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ALIDE2_RS01100 4c1cc92bcbdc63ca4290f50305062b53 296 SUPERFAMILY SSF51735 1 161 2.43E-35 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS01100 4c1cc92bcbdc63ca4290f50305062b53 296 PIRSF PIRSF000103 1 292 7.9E-70 T 19-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 ALIDE2_RS19930 78b59a6498d1a349b4156165eedc52de 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 9 97 1.9E-21 T 19-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 ALIDE2_RS19930 78b59a6498d1a349b4156165eedc52de 102 PANTHER PTHR11434 4 102 1.1E-39 T 19-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 ALIDE2_RS19930 78b59a6498d1a349b4156165eedc52de 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 102 20.156 T 19-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 ALIDE2_RS15415 aeea94297d746dc935d04ff6b2050de2 65 SUPERFAMILY SSF54285 1 65 8.37E-15 T 19-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ALIDE2_RS15415 aeea94297d746dc935d04ff6b2050de2 65 PANTHER PTHR34472 1 65 7.0E-15 T 19-04-2016 ALIDE2_RS15415 aeea94297d746dc935d04ff6b2050de2 65 Pfam PF02597 ThiS family 5 65 1.8E-12 T 19-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 ALIDE2_RS15415 aeea94297d746dc935d04ff6b2050de2 65 Gene3D G3DSA:3.10.20.30 1 65 2.2E-20 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS15415 aeea94297d746dc935d04ff6b2050de2 65 PANTHER PTHR34472:SF1 1 65 7.0E-15 T 19-04-2016 ALIDE2_RS15415 aeea94297d746dc935d04ff6b2050de2 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 6.1E-16 T 19-04-2016 IPR010035 ThiS, thiamine-biosynthesis ALIDE2_RS07840 f14470b683cfe19fe3abd4e7814fb26f 327 Pfam PF03524 Conjugal transfer protein 100 319 9.2E-65 T 19-04-2016 IPR010258 Conjugal transfer, TrbG/VirB9/CagX ALIDE2_RS07840 f14470b683cfe19fe3abd4e7814fb26f 327 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 101 308 1.3E-89 T 19-04-2016 IPR014142 P-type conjugative transfer protein TrbG ALIDE2_RS01045 a582a98443ba1384f427494a333e33a9 966 Gene3D G3DSA:1.10.101.10 2 74 1.8E-7 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS01045 a582a98443ba1384f427494a333e33a9 966 Gene3D G3DSA:3.90.70.10 334 563 1.7E-26 T 19-04-2016 ALIDE2_RS01045 a582a98443ba1384f427494a333e33a9 966 Gene3D G3DSA:3.30.20.10 171 207 4.7E-8 T 19-04-2016 ALIDE2_RS01045 a582a98443ba1384f427494a333e33a9 966 SUPERFAMILY SSF53474 752 864 9.36E-9 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS01045 a582a98443ba1384f427494a333e33a9 966 SUPERFAMILY SSF53474 635 714 9.36E-9 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS01045 a582a98443ba1384f427494a333e33a9 966 Pfam PF00112 Papain family cysteine protease 352 550 6.9E-10 T 19-04-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 ALIDE2_RS01045 a582a98443ba1384f427494a333e33a9 966 SMART SM00645 344 564 0.0023 T 19-04-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 ALIDE2_RS01045 a582a98443ba1384f427494a333e33a9 966 SUPERFAMILY SSF47090 3 75 1.1E-5 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS01045 a582a98443ba1384f427494a333e33a9 966 SUPERFAMILY SSF54001 353 564 1.93E-29 T 19-04-2016 ALIDE2_RS01045 a582a98443ba1384f427494a333e33a9 966 Gene3D G3DSA:3.40.50.1820 733 820 1.8E-4 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS01045 a582a98443ba1384f427494a333e33a9 966 Gene3D G3DSA:3.40.50.1820 634 689 1.8E-4 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS01045 a582a98443ba1384f427494a333e33a9 966 SUPERFAMILY SSF53955 113 265 4.5E-16 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS13795 c37f0cecbd107dedbc49da2678adc746 995 SUPERFAMILY SSF53335 156 582 1.85E-40 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS13795 c37f0cecbd107dedbc49da2678adc746 995 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 463 469 - T 19-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ALIDE2_RS13795 c37f0cecbd107dedbc49da2678adc746 995 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 314 330 3.8E-8 T 19-04-2016 ALIDE2_RS13795 c37f0cecbd107dedbc49da2678adc746 995 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 344 358 3.8E-8 T 19-04-2016 ALIDE2_RS13795 c37f0cecbd107dedbc49da2678adc746 995 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 460 472 3.8E-8 T 19-04-2016 ALIDE2_RS13795 c37f0cecbd107dedbc49da2678adc746 995 Pfam PF02384 N-6 DNA Methylase 292 539 9.6E-15 T 19-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS13795 c37f0cecbd107dedbc49da2678adc746 995 Gene3D G3DSA:3.40.50.150 316 403 1.8E-22 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS13795 c37f0cecbd107dedbc49da2678adc746 995 Gene3D G3DSA:3.40.50.150 443 583 1.8E-22 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS14515 fbed3178451246156103bc1cce4cbc18 657 Pfam PF01136 Peptidase family U32 78 307 9.6E-69 T 19-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS14515 fbed3178451246156103bc1cce4cbc18 657 ProSitePatterns PS01276 Peptidase family U32 signature. 164 182 - T 19-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS14515 fbed3178451246156103bc1cce4cbc18 657 PANTHER PTHR30217:SF10 1 637 2.0E-204 T 19-04-2016 ALIDE2_RS14515 fbed3178451246156103bc1cce4cbc18 657 Pfam PF12392 Collagenase 397 510 5.3E-21 T 19-04-2016 IPR020988 Peptidase U32, collagenase KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS14515 fbed3178451246156103bc1cce4cbc18 657 PANTHER PTHR30217 1 637 2.0E-204 T 19-04-2016 ALIDE2_RS14515 fbed3178451246156103bc1cce4cbc18 657 SUPERFAMILY SSF51395 17 158 4.39E-6 T 19-04-2016 ALIDE2_RS03990 f6dac0f6eae7fa5a0e51e46a757b5ec6 372 PANTHER PTHR21090 2 370 1.9E-184 T 19-04-2016 ALIDE2_RS03990 f6dac0f6eae7fa5a0e51e46a757b5ec6 372 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 9 367 41.798 T 19-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 ALIDE2_RS03990 f6dac0f6eae7fa5a0e51e46a757b5ec6 372 SUPERFAMILY SSF56796 13 365 7.33E-115 T 19-04-2016 ALIDE2_RS03990 f6dac0f6eae7fa5a0e51e46a757b5ec6 372 Gene3D G3DSA:3.40.50.1970 12 179 2.9E-65 T 19-04-2016 ALIDE2_RS03990 f6dac0f6eae7fa5a0e51e46a757b5ec6 372 PIRSF PIRSF001455 11 370 7.7E-110 T 19-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 ALIDE2_RS03990 f6dac0f6eae7fa5a0e51e46a757b5ec6 372 Pfam PF01761 3-dehydroquinate synthase 74 335 1.6E-107 T 19-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 ALIDE2_RS03990 f6dac0f6eae7fa5a0e51e46a757b5ec6 372 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 20 356 1.8E-116 T 19-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 ALIDE2_RS03990 f6dac0f6eae7fa5a0e51e46a757b5ec6 372 Gene3D G3DSA:1.20.1090.10 180 365 8.2E-69 T 19-04-2016 ALIDE2_RS04650 020dc511cdfa8502e8654175e4fd8856 345 SUPERFAMILY SSF46626 78 165 5.92E-25 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS04650 020dc511cdfa8502e8654175e4fd8856 345 PANTHER PTHR35008 46 278 1.8E-33 T 19-04-2016 ALIDE2_RS04650 020dc511cdfa8502e8654175e4fd8856 345 Gene3D G3DSA:1.10.760.10 43 165 1.0E-31 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS04650 020dc511cdfa8502e8654175e4fd8856 345 Pfam PF00034 Cytochrome c 185 273 4.5E-10 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS04650 020dc511cdfa8502e8654175e4fd8856 345 PANTHER PTHR35008:SF4 46 278 1.8E-33 T 19-04-2016 ALIDE2_RS04650 020dc511cdfa8502e8654175e4fd8856 345 Gene3D G3DSA:1.10.760.10 182 281 1.5E-15 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS04650 020dc511cdfa8502e8654175e4fd8856 345 SUPERFAMILY SSF46626 175 281 2.01E-18 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS13475 49f9eb78bddb67e08f2602a8823eac8b 476 PANTHER PTHR30203 67 475 1.7E-39 T 19-04-2016 ALIDE2_RS13475 49f9eb78bddb67e08f2602a8823eac8b 476 PANTHER PTHR30203:SF9 67 475 1.7E-39 T 19-04-2016 ALIDE2_RS13475 49f9eb78bddb67e08f2602a8823eac8b 476 Pfam PF02321 Outer membrane efflux protein 76 247 2.0E-8 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS13475 49f9eb78bddb67e08f2602a8823eac8b 476 Pfam PF02321 Outer membrane efflux protein 281 451 3.0E-8 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS13475 49f9eb78bddb67e08f2602a8823eac8b 476 SUPERFAMILY SSF56954 68 452 9.81E-48 T 19-04-2016 ALIDE2_RS13475 49f9eb78bddb67e08f2602a8823eac8b 476 SUPERFAMILY SSF56954 2 25 9.81E-48 T 19-04-2016 ALIDE2_RS13475 49f9eb78bddb67e08f2602a8823eac8b 476 Gene3D G3DSA:1.20.1600.10 72 452 5.1E-25 T 19-04-2016 ALIDE2_RS17755 b432a394afb4a46d5fb99433f1f34d0e 879 Pfam PF02687 FtsX-like permease family 280 404 4.3E-13 T 19-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 ALIDE2_RS17755 b432a394afb4a46d5fb99433f1f34d0e 879 Pfam PF02687 FtsX-like permease family 754 867 1.7E-16 T 19-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 ALIDE2_RS17755 b432a394afb4a46d5fb99433f1f34d0e 879 PANTHER PTHR30489 252 878 1.8E-52 T 19-04-2016 ALIDE2_RS17755 b432a394afb4a46d5fb99433f1f34d0e 879 PANTHER PTHR30489 11 214 1.8E-52 T 19-04-2016 ALIDE2_RS17755 b432a394afb4a46d5fb99433f1f34d0e 879 PANTHER PTHR30489:SF6 252 878 1.8E-52 T 19-04-2016 ALIDE2_RS17755 b432a394afb4a46d5fb99433f1f34d0e 879 PANTHER PTHR30489:SF6 11 214 1.8E-52 T 19-04-2016 ALIDE2_RS17900 9bb19084743020db82ce6dd5fa468a11 119 SUPERFAMILY SSF54534 3 117 4.91E-43 T 19-04-2016 ALIDE2_RS17900 9bb19084743020db82ce6dd5fa468a11 119 PANTHER PTHR10516 3 118 4.6E-59 T 19-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type ALIDE2_RS17900 9bb19084743020db82ce6dd5fa468a11 119 Gene3D G3DSA:3.10.50.40 4 118 1.3E-48 T 19-04-2016 ALIDE2_RS17900 9bb19084743020db82ce6dd5fa468a11 119 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 22 115 2.1E-34 T 19-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 ALIDE2_RS01575 53c154ee71237507e60387f71ca59d55 481 Pfam PF02934 GatB/GatE catalytic domain 11 293 9.2E-110 T 19-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 ALIDE2_RS01575 53c154ee71237507e60387f71ca59d55 481 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 9 480 2.6E-168 T 19-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 ALIDE2_RS01575 53c154ee71237507e60387f71ca59d55 481 PANTHER PTHR11659 2 480 4.9E-251 T 19-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 ALIDE2_RS01575 53c154ee71237507e60387f71ca59d55 481 SMART SM00845 332 480 6.7E-79 T 19-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 ALIDE2_RS01575 53c154ee71237507e60387f71ca59d55 481 Pfam PF02637 GatB domain 333 480 2.3E-53 T 19-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 ALIDE2_RS01575 53c154ee71237507e60387f71ca59d55 481 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 149 163 - T 19-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 ALIDE2_RS01575 53c154ee71237507e60387f71ca59d55 481 PANTHER PTHR11659:SF0 2 480 4.9E-251 T 19-04-2016 ALIDE2_RS01575 53c154ee71237507e60387f71ca59d55 481 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 8 481 37.02 T 19-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 ALIDE2_RS01575 53c154ee71237507e60387f71ca59d55 481 SUPERFAMILY SSF89095 301 406 1.44E-33 T 19-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 ALIDE2_RS01575 53c154ee71237507e60387f71ca59d55 481 SUPERFAMILY SSF55931 10 300 5.23E-117 T 19-04-2016 ALIDE2_RS01575 53c154ee71237507e60387f71ca59d55 481 Gene3D G3DSA:1.10.10.410 425 481 3.2E-7 T 19-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal ALIDE2_RS02415 a618d8ba5ee609981adcda7dc983720b 416 PANTHER PTHR10909:SF305 13 410 9.1E-128 T 19-04-2016 ALIDE2_RS02415 a618d8ba5ee609981adcda7dc983720b 416 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 229 1.8E-17 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS02415 a618d8ba5ee609981adcda7dc983720b 416 Gene3D G3DSA:1.10.540.10 12 124 1.5E-30 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS02415 a618d8ba5ee609981adcda7dc983720b 416 Gene3D G3DSA:2.40.110.10 128 232 7.4E-29 T 19-04-2016 ALIDE2_RS02415 a618d8ba5ee609981adcda7dc983720b 416 SUPERFAMILY SSF47203 241 393 3.38E-53 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS02415 a618d8ba5ee609981adcda7dc983720b 416 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 247 390 2.7E-45 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS02415 a618d8ba5ee609981adcda7dc983720b 416 SUPERFAMILY SSF56645 12 252 8.9E-63 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS02415 a618d8ba5ee609981adcda7dc983720b 416 PANTHER PTHR10909 13 410 9.1E-128 T 19-04-2016 ALIDE2_RS02415 a618d8ba5ee609981adcda7dc983720b 416 Gene3D G3DSA:1.20.140.10 233 393 5.9E-65 T 19-04-2016 ALIDE2_RS02415 a618d8ba5ee609981adcda7dc983720b 416 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 124 3.4E-28 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS22270 c217c9c58728022ff8dbec73cd8fa8a9 245 PANTHER PTHR33693 114 245 6.5E-12 T 19-04-2016 ALIDE2_RS22270 c217c9c58728022ff8dbec73cd8fa8a9 245 SUPERFAMILY SSF52141 104 240 7.85E-21 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like ALIDE2_RS22270 c217c9c58728022ff8dbec73cd8fa8a9 245 Pfam PF03167 Uracil DNA glycosylase superfamily 114 232 3.2E-11 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like ALIDE2_RS22270 c217c9c58728022ff8dbec73cd8fa8a9 245 Gene3D G3DSA:3.40.470.10 114 241 1.4E-20 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like ALIDE2_RS22270 c217c9c58728022ff8dbec73cd8fa8a9 245 PANTHER PTHR33693:SF1 114 245 6.5E-12 T 19-04-2016 ALIDE2_RS13900 4a5ef54d73b8c026e9d84e69b07f1c8c 178 SUPERFAMILY SSF53955 19 140 5.87E-36 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS13900 4a5ef54d73b8c026e9d84e69b07f1c8c 178 Pfam PF01464 Transglycosylase SLT domain 22 126 2.2E-25 T 19-04-2016 IPR008258 Transglycosylase SLT domain 1 ALIDE2_RS13900 4a5ef54d73b8c026e9d84e69b07f1c8c 178 PANTHER PTHR21666 2 121 6.7E-12 T 19-04-2016 ALIDE2_RS13900 4a5ef54d73b8c026e9d84e69b07f1c8c 178 Gene3D G3DSA:1.10.530.10 22 143 1.4E-21 T 19-04-2016 ALIDE2_RS13025 a85b648585968ee427ccda78e46d3cb5 377 Gene3D G3DSA:3.40.50.2300 159 242 5.0E-7 T 19-04-2016 ALIDE2_RS13025 a85b648585968ee427ccda78e46d3cb5 377 PANTHER PTHR30483 9 375 1.2E-61 T 19-04-2016 ALIDE2_RS13025 a85b648585968ee427ccda78e46d3cb5 377 Pfam PF13458 Periplasmic binding protein 33 359 1.6E-55 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS13025 a85b648585968ee427ccda78e46d3cb5 377 SUPERFAMILY SSF53822 32 376 3.08E-73 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS13025 a85b648585968ee427ccda78e46d3cb5 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 56 72 1.3E-5 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS13025 a85b648585968ee427ccda78e46d3cb5 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 282 295 1.3E-5 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS13025 a85b648585968ee427ccda78e46d3cb5 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 34 50 1.3E-5 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS13025 a85b648585968ee427ccda78e46d3cb5 377 Gene3D G3DSA:3.40.50.2300 29 156 3.7E-46 T 19-04-2016 ALIDE2_RS13025 a85b648585968ee427ccda78e46d3cb5 377 Gene3D G3DSA:3.40.50.2300 289 359 3.7E-46 T 19-04-2016 ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 PANTHER PTHR24322 8 136 3.2E-54 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 PANTHER PTHR24322 152 184 3.2E-54 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 9.9E-47 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 9.9E-47 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 9.9E-47 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.9E-47 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 9.9E-47 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 9.9E-47 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 9.8E-16 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.8E-16 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 9.8E-16 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 Gene3D G3DSA:3.40.50.720 2 244 4.3E-82 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 244 1.6E-114 T 19-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 Pfam PF00106 short chain dehydrogenase 4 196 1.6E-61 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 PANTHER PTHR24322:SF328 8 136 3.2E-54 T 19-04-2016 ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 PANTHER PTHR24322:SF328 152 184 3.2E-54 T 19-04-2016 ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 SUPERFAMILY SSF51735 3 244 5.4E-78 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12245 e42ff66602b8801b8e1705c8e97cdb2b 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 188 4.2E-5 T 19-04-2016 ALIDE2_RS09095 8dbee42523cf1b9176024d49f360bcac 147 PANTHER PTHR30204 1 116 7.2E-45 T 19-04-2016 ALIDE2_RS09095 8dbee42523cf1b9176024d49f360bcac 147 Pfam PF13411 MerR HTH family regulatory protein 4 70 6.4E-21 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS09095 8dbee42523cf1b9176024d49f360bcac 147 SMART SM00422 3 72 4.7E-31 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS09095 8dbee42523cf1b9176024d49f360bcac 147 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 3 129 3.2E-53 T 19-04-2016 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 ALIDE2_RS09095 8dbee42523cf1b9176024d49f360bcac 147 Gene3D G3DSA:1.10.1660.10 3 57 2.0E-27 T 19-04-2016 ALIDE2_RS09095 8dbee42523cf1b9176024d49f360bcac 147 PANTHER PTHR30204:SF18 1 116 7.2E-45 T 19-04-2016 ALIDE2_RS09095 8dbee42523cf1b9176024d49f360bcac 147 Gene3D G3DSA:1.10.1660.10 58 133 1.8E-26 T 19-04-2016 ALIDE2_RS09095 8dbee42523cf1b9176024d49f360bcac 147 SUPERFAMILY SSF46955 4 127 4.4E-36 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS09095 8dbee42523cf1b9176024d49f360bcac 147 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.7E-10 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS09095 8dbee42523cf1b9176024d49f360bcac 147 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.7E-10 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS09095 8dbee42523cf1b9176024d49f360bcac 147 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 1.7E-10 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS07940 3ad321d6e81818d7bebb6be942dc7a29 673 SUPERFAMILY SSF53474 368 465 6.58E-21 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS07940 3ad321d6e81818d7bebb6be942dc7a29 673 SUPERFAMILY SSF53474 506 638 6.58E-21 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS07940 3ad321d6e81818d7bebb6be942dc7a29 673 Gene3D G3DSA:3.40.50.1820 369 470 1.8E-19 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS07940 3ad321d6e81818d7bebb6be942dc7a29 673 Gene3D G3DSA:3.40.50.1820 505 645 1.8E-19 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS15860 fd647a2e74f89630535fca0f559acca8 397 SUPERFAMILY SSF103473 8 388 1.57E-40 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS15860 fd647a2e74f89630535fca0f559acca8 397 PANTHER PTHR23523 5 396 1.1E-79 T 19-04-2016 ALIDE2_RS15860 fd647a2e74f89630535fca0f559acca8 397 Pfam PF07690 Major Facilitator Superfamily 29 343 2.3E-21 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS15860 fd647a2e74f89630535fca0f559acca8 397 Gene3D G3DSA:1.20.1250.20 204 386 3.8E-16 T 19-04-2016 ALIDE2_RS15860 fd647a2e74f89630535fca0f559acca8 397 Gene3D G3DSA:1.20.1250.20 27 181 2.1E-10 T 19-04-2016 ALIDE2_RS15860 fd647a2e74f89630535fca0f559acca8 397 PANTHER PTHR23523:SF1 5 396 1.1E-79 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PANTHER PTHR22912:SF131 1 127 1.3E-222 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PANTHER PTHR22912:SF131 144 468 1.3E-222 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 Gene3D G3DSA:3.50.50.60 2 155 3.4E-38 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 Gene3D G3DSA:3.30.390.30 344 472 1.0E-47 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PIRSF PIRSF000350 1 474 3.2E-84 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 337 6.6E-68 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 356 465 2.8E-36 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 473 1.3E-160 T 19-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 Gene3D G3DSA:3.50.50.60 156 343 1.4E-52 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 210 8.5E-77 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.5E-77 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 432 8.5E-77 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 352 373 8.5E-77 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 8.5E-77 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 158 8.5E-77 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 317 324 8.5E-77 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 288 8.5E-77 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 439 459 8.5E-77 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PANTHER PTHR22912 1 127 1.3E-222 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PANTHER PTHR22912 144 468 1.3E-222 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 SUPERFAMILY SSF51905 1 347 1.94E-57 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 302 324 1.1E-41 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 185 203 1.1E-41 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.1E-41 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.1E-41 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 273 289 1.1E-41 T 19-04-2016 ALIDE2_RS15035 158b3becc9e4f1dd54ed707397b93e6f 475 SUPERFAMILY SSF55424 352 472 2.06E-41 T 19-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 ALIDE2_RS17220 685451e0c788d79a9b786f00c3e351af 413 PANTHER PTHR13847 1 64 3.0E-54 T 19-04-2016 ALIDE2_RS17220 685451e0c788d79a9b786f00c3e351af 413 PANTHER PTHR13847 112 413 3.0E-54 T 19-04-2016 ALIDE2_RS17220 685451e0c788d79a9b786f00c3e351af 413 SUPERFAMILY SSF51905 1 54 6.09E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS17220 685451e0c788d79a9b786f00c3e351af 413 SUPERFAMILY SSF51905 357 413 6.09E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS17220 685451e0c788d79a9b786f00c3e351af 413 SUPERFAMILY SSF51905 105 265 6.09E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS17220 685451e0c788d79a9b786f00c3e351af 413 Gene3D G3DSA:3.30.9.10 265 308 9.5E-8 T 19-04-2016 ALIDE2_RS17220 685451e0c788d79a9b786f00c3e351af 413 Gene3D G3DSA:3.30.9.10 133 186 9.5E-8 T 19-04-2016 ALIDE2_RS17220 685451e0c788d79a9b786f00c3e351af 413 PANTHER PTHR13847:SF148 1 64 3.0E-54 T 19-04-2016 ALIDE2_RS17220 685451e0c788d79a9b786f00c3e351af 413 PANTHER PTHR13847:SF148 112 413 3.0E-54 T 19-04-2016 ALIDE2_RS17220 685451e0c788d79a9b786f00c3e351af 413 Pfam PF01266 FAD dependent oxidoreductase 3 395 3.1E-46 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS17220 685451e0c788d79a9b786f00c3e351af 413 Gene3D G3DSA:3.50.50.60 187 264 1.4E-44 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS17220 685451e0c788d79a9b786f00c3e351af 413 Gene3D G3DSA:3.50.50.60 106 128 1.4E-44 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS17220 685451e0c788d79a9b786f00c3e351af 413 Gene3D G3DSA:3.50.50.60 357 413 1.4E-44 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS17220 685451e0c788d79a9b786f00c3e351af 413 Gene3D G3DSA:3.50.50.60 2 58 1.4E-44 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS09905 686d899cc509412479b26f6f367fe136 219 Gene3D G3DSA:3.30.1330.60 102 214 2.2E-41 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS09905 686d899cc509412479b26f6f367fe136 219 Pfam PF00691 OmpA family 112 207 4.3E-25 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS09905 686d899cc509412479b26f6f367fe136 219 PRINTS PR01021 OMPA domain signature 113 135 1.5E-20 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ALIDE2_RS09905 686d899cc509412479b26f6f367fe136 219 PRINTS PR01021 OMPA domain signature 158 174 1.5E-20 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ALIDE2_RS09905 686d899cc509412479b26f6f367fe136 219 PRINTS PR01021 OMPA domain signature 143 158 1.5E-20 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ALIDE2_RS09905 686d899cc509412479b26f6f367fe136 219 SUPERFAMILY SSF103088 105 213 1.16E-38 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS09905 686d899cc509412479b26f6f367fe136 219 PANTHER PTHR30128 112 218 2.7E-45 T 19-04-2016 ALIDE2_RS18070 514ec901af8a58ac8398ee0e09fb8c56 538 SUPERFAMILY SSF53850 79 291 2.25E-30 T 19-04-2016 ALIDE2_RS18070 514ec901af8a58ac8398ee0e09fb8c56 538 SMART SM00267 362 536 1.4E-63 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS18070 514ec901af8a58ac8398ee0e09fb8c56 538 Pfam PF00990 Diguanylate cyclase, GGDEF domain 374 532 9.0E-48 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS18070 514ec901af8a58ac8398ee0e09fb8c56 538 PANTHER PTHR10799 277 533 9.8E-34 T 19-04-2016 ALIDE2_RS18070 514ec901af8a58ac8398ee0e09fb8c56 538 SUPERFAMILY SSF55073 378 534 2.35E-47 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS18070 514ec901af8a58ac8398ee0e09fb8c56 538 SMART SM00062 78 304 1.6E-4 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS18070 514ec901af8a58ac8398ee0e09fb8c56 538 Gene3D G3DSA:3.30.70.270 375 534 2.3E-53 T 19-04-2016 ALIDE2_RS18070 514ec901af8a58ac8398ee0e09fb8c56 538 Gene3D G3DSA:3.40.190.10 79 158 1.4E-12 T 19-04-2016 ALIDE2_RS18070 514ec901af8a58ac8398ee0e09fb8c56 538 PANTHER PTHR10799:SF750 277 533 9.8E-34 T 19-04-2016 ALIDE2_RS18070 514ec901af8a58ac8398ee0e09fb8c56 538 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 369 534 3.6E-53 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS18070 514ec901af8a58ac8398ee0e09fb8c56 538 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 80 295 1.4E-26 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS18070 514ec901af8a58ac8398ee0e09fb8c56 538 Gene3D G3DSA:3.40.190.10 159 243 1.3E-8 T 19-04-2016 ALIDE2_RS16145 14ef0d5036fc3204ce70af2a5eea394b 185 PANTHER PTHR36917:SF1 1 184 1.1E-62 T 19-04-2016 ALIDE2_RS16145 14ef0d5036fc3204ce70af2a5eea394b 185 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 175 5.5E-57 T 19-04-2016 IPR006008 Intracellular septation protein A GO:0016021 ALIDE2_RS16145 14ef0d5036fc3204ce70af2a5eea394b 185 Pfam PF04279 Intracellular septation protein A 1 175 2.3E-72 T 19-04-2016 IPR006008 Intracellular septation protein A GO:0016021 ALIDE2_RS16145 14ef0d5036fc3204ce70af2a5eea394b 185 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.002 T 19-04-2016 IPR006008 Intracellular septation protein A GO:0016021 ALIDE2_RS16145 14ef0d5036fc3204ce70af2a5eea394b 185 PANTHER PTHR36917 1 184 1.1E-62 T 19-04-2016 ALIDE2_RS11715 642f70f598a33d127afaf72af187590b 574 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 67 138 1.1E-8 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS11715 642f70f598a33d127afaf72af187590b 574 Gene3D G3DSA:2.140.10.20 274 565 1.1E-141 T 19-04-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain ALIDE2_RS11715 642f70f598a33d127afaf72af187590b 574 Gene3D G3DSA:1.10.760.10 53 143 1.4E-22 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS11715 642f70f598a33d127afaf72af187590b 574 SUPERFAMILY SSF46626 7 159 8.33E-19 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS11715 642f70f598a33d127afaf72af187590b 574 SUPERFAMILY SSF51004 147 574 4.45E-121 T 19-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain ALIDE2_RS11715 642f70f598a33d127afaf72af187590b 574 Pfam PF02239 Cytochrome D1 heme domain 175 569 1.9E-153 T 19-04-2016 ALIDE2_RS01430 56e7a0568e911ef9e2e27824f1a7854a 250 Gene3D G3DSA:1.10.10.10 3 75 4.9E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01430 56e7a0568e911ef9e2e27824f1a7854a 250 SUPERFAMILY SSF55781 81 233 2.07E-34 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS01430 56e7a0568e911ef9e2e27824f1a7854a 250 Gene3D G3DSA:3.30.450.40 81 234 8.3E-39 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS01430 56e7a0568e911ef9e2e27824f1a7854a 250 PANTHER PTHR30136 1 245 6.5E-51 T 19-04-2016 ALIDE2_RS01430 56e7a0568e911ef9e2e27824f1a7854a 250 SMART SM00346 15 104 3.4E-17 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS01430 56e7a0568e911ef9e2e27824f1a7854a 250 PANTHER PTHR30136:SF14 1 245 6.5E-51 T 19-04-2016 ALIDE2_RS01430 56e7a0568e911ef9e2e27824f1a7854a 250 Pfam PF01614 Bacterial transcriptional regulator 165 231 4.4E-12 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS01430 56e7a0568e911ef9e2e27824f1a7854a 250 Pfam PF09339 IclR helix-turn-helix domain 17 66 1.3E-12 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS01430 56e7a0568e911ef9e2e27824f1a7854a 250 SUPERFAMILY SSF46785 17 86 3.31E-13 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02685 cf9830dcf80ab2a67d718e103f58a67c 328 SMART SM00829 10 324 1.8E-5 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ALIDE2_RS02685 cf9830dcf80ab2a67d718e103f58a67c 328 SUPERFAMILY SSF51735 119 293 8.6E-37 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS02685 cf9830dcf80ab2a67d718e103f58a67c 328 PANTHER PTHR11695 17 328 6.4E-143 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS02685 cf9830dcf80ab2a67d718e103f58a67c 328 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 325 1.2E-134 T 19-04-2016 IPR014188 Acrylyl-CoA reductase AcuI ALIDE2_RS02685 cf9830dcf80ab2a67d718e103f58a67c 328 Gene3D G3DSA:3.90.180.10 11 135 3.2E-6 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS02685 cf9830dcf80ab2a67d718e103f58a67c 328 PANTHER PTHR11695:SF13 17 328 6.4E-143 T 19-04-2016 IPR014188 Acrylyl-CoA reductase AcuI ALIDE2_RS02685 cf9830dcf80ab2a67d718e103f58a67c 328 Gene3D G3DSA:3.40.50.720 136 292 1.5E-76 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS02685 cf9830dcf80ab2a67d718e103f58a67c 328 Pfam PF00107 Zinc-binding dehydrogenase 160 285 2.1E-13 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ALIDE2_RS02685 cf9830dcf80ab2a67d718e103f58a67c 328 SUPERFAMILY SSF50129 2 144 5.86E-41 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS22445 eeee1e53ded7702cca8a287d5c2233af 453 Pfam PF07287 Protein of unknown function (DUF1446) 9 365 1.2E-121 T 19-04-2016 IPR010839 Protein of unknown function DUF1446 ALIDE2_RS22445 eeee1e53ded7702cca8a287d5c2233af 453 PANTHER PTHR13943 141 349 8.0E-87 T 19-04-2016 ALIDE2_RS22445 eeee1e53ded7702cca8a287d5c2233af 453 PANTHER PTHR13943 44 118 8.0E-87 T 19-04-2016 ALIDE2_RS22445 eeee1e53ded7702cca8a287d5c2233af 453 PANTHER PTHR13943:SF48 141 349 8.0E-87 T 19-04-2016 ALIDE2_RS22445 eeee1e53ded7702cca8a287d5c2233af 453 PANTHER PTHR13943:SF48 44 118 8.0E-87 T 19-04-2016 ALIDE2_RS02525 2fa5d47955a8667f7cc223b900ed2ab3 263 PANTHER PTHR24567 26 235 3.1E-27 T 19-04-2016 ALIDE2_RS02525 2fa5d47955a8667f7cc223b900ed2ab3 263 Pfam PF13545 Crp-like helix-turn-helix domain 166 235 3.3E-12 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS02525 2fa5d47955a8667f7cc223b900ed2ab3 263 SUPERFAMILY SSF51206 23 153 8.25E-23 T 19-04-2016 IPR018490 Cyclic nucleotide-binding-like ALIDE2_RS02525 2fa5d47955a8667f7cc223b900ed2ab3 263 Pfam PF00027 Cyclic nucleotide-binding domain 50 132 3.6E-12 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS02525 2fa5d47955a8667f7cc223b900ed2ab3 263 Gene3D G3DSA:1.10.10.10 165 231 1.4E-13 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02525 2fa5d47955a8667f7cc223b900ed2ab3 263 SMART SM00100 28 149 1.1E-6 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS02525 2fa5d47955a8667f7cc223b900ed2ab3 263 SUPERFAMILY SSF46785 164 236 9.69E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02525 2fa5d47955a8667f7cc223b900ed2ab3 263 Gene3D G3DSA:2.60.120.10 25 152 1.7E-18 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS02525 2fa5d47955a8667f7cc223b900ed2ab3 263 SMART SM00419 182 230 1.1E-5 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS23005 aceeb9a108e3737d1610187792de8542 336 SUPERFAMILY SSF53850 125 291 2.53E-5 T 19-04-2016 ALIDE2_RS23005 aceeb9a108e3737d1610187792de8542 336 PANTHER PTHR30349:SF32 11 292 3.6E-87 T 19-04-2016 ALIDE2_RS23005 aceeb9a108e3737d1610187792de8542 336 PANTHER PTHR30349 11 292 3.6E-87 T 19-04-2016 ALIDE2_RS23005 aceeb9a108e3737d1610187792de8542 336 PIRSF PIRSF017082 5 335 6.6E-72 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS23005 aceeb9a108e3737d1610187792de8542 336 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 58 331 1.4E-73 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS20210 9867f9744e3756efa2caabcbf9bc686d 128 Gene3D G3DSA:3.40.50.2300 3 122 4.0E-36 T 19-04-2016 ALIDE2_RS20210 9867f9744e3756efa2caabcbf9bc686d 128 SUPERFAMILY SSF52172 3 121 1.57E-36 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS20210 9867f9744e3756efa2caabcbf9bc686d 128 PANTHER PTHR26402 3 120 6.4E-39 T 19-04-2016 ALIDE2_RS20210 9867f9744e3756efa2caabcbf9bc686d 128 SMART SM00448 3 117 1.0E-41 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20210 9867f9744e3756efa2caabcbf9bc686d 128 Pfam PF00072 Response regulator receiver domain 5 117 3.5E-27 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS19235 af12373290230533c771d4e24940a9f4 78 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 58 78 3.4E-8 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS19235 af12373290230533c771d4e24940a9f4 78 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 41 58 3.4E-8 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS19235 af12373290230533c771d4e24940a9f4 78 SUPERFAMILY SSF46689 11 77 4.21E-20 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS19235 af12373290230533c771d4e24940a9f4 78 Gene3D G3DSA:1.10.10.60 7 77 1.7E-22 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS19235 af12373290230533c771d4e24940a9f4 78 PANTHER PTHR32071 11 77 6.0E-15 T 19-04-2016 ALIDE2_RS19235 af12373290230533c771d4e24940a9f4 78 Pfam PF02954 Bacterial regulatory protein, Fis family 36 72 1.6E-12 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS19235 af12373290230533c771d4e24940a9f4 78 PIRSF PIRSF002097 1 78 2.8E-33 T 19-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 ALIDE2_RS07770 ec5027eb69da1fad41f840c502ba744a 409 PANTHER PTHR11360:SF126 18 408 4.2E-36 T 19-04-2016 ALIDE2_RS07770 ec5027eb69da1fad41f840c502ba744a 409 PANTHER PTHR11360 18 408 4.2E-36 T 19-04-2016 ALIDE2_RS07770 ec5027eb69da1fad41f840c502ba744a 409 SUPERFAMILY SSF103473 11 407 6.41E-32 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS07770 ec5027eb69da1fad41f840c502ba744a 409 Pfam PF07690 Major Facilitator Superfamily 33 355 3.7E-11 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS07770 ec5027eb69da1fad41f840c502ba744a 409 Gene3D G3DSA:1.20.1250.20 31 201 1.2E-10 T 19-04-2016 ALIDE2_RS07770 ec5027eb69da1fad41f840c502ba744a 409 Gene3D G3DSA:1.20.1250.20 228 404 2.1E-4 T 19-04-2016 ALIDE2_RS20220 83747067466f5ce03af1d4b5204f6dc4 222 PANTHER PTHR26402 97 186 5.0E-15 T 19-04-2016 ALIDE2_RS20220 83747067466f5ce03af1d4b5204f6dc4 222 Pfam PF12728 Helix-turn-helix domain 14 60 4.3E-10 T 19-04-2016 ALIDE2_RS20220 83747067466f5ce03af1d4b5204f6dc4 222 SUPERFAMILY SSF46955 14 68 1.25E-5 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS20220 83747067466f5ce03af1d4b5204f6dc4 222 SUPERFAMILY SSF52172 97 217 2.13E-17 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS20220 83747067466f5ce03af1d4b5204f6dc4 222 SMART SM00448 97 212 1.6E-7 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20220 83747067466f5ce03af1d4b5204f6dc4 222 Gene3D G3DSA:3.40.50.2300 97 217 1.2E-17 T 19-04-2016 ALIDE2_RS20220 83747067466f5ce03af1d4b5204f6dc4 222 Pfam PF00072 Response regulator receiver domain 99 207 8.8E-11 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20220 83747067466f5ce03af1d4b5204f6dc4 222 PANTHER PTHR26402:SF578 97 186 5.0E-15 T 19-04-2016 ALIDE2_RS20220 83747067466f5ce03af1d4b5204f6dc4 222 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 14 60 1.4E-11 T 19-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 ALIDE2_RS02345 290f9e270a9210d508da5511aab266e7 275 SUPERFAMILY SSF109998 36 133 9.02E-5 T 19-04-2016 IPR027304 Trigger factor/SurA domain ALIDE2_RS02345 290f9e270a9210d508da5511aab266e7 275 PANTHER PTHR10657:SF15 87 262 2.3E-18 T 19-04-2016 ALIDE2_RS02345 290f9e270a9210d508da5511aab266e7 275 PANTHER PTHR10657:SF15 38 59 2.3E-18 T 19-04-2016 ALIDE2_RS02345 290f9e270a9210d508da5511aab266e7 275 SUPERFAMILY SSF54534 116 221 1.37E-20 T 19-04-2016 ALIDE2_RS02345 290f9e270a9210d508da5511aab266e7 275 Pfam PF00639 PPIC-type PPIASE domain 123 217 1.8E-18 T 19-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 ALIDE2_RS02345 290f9e270a9210d508da5511aab266e7 275 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 158 178 - T 19-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site ALIDE2_RS02345 290f9e270a9210d508da5511aab266e7 275 PANTHER PTHR10657 87 262 2.3E-18 T 19-04-2016 ALIDE2_RS02345 290f9e270a9210d508da5511aab266e7 275 PANTHER PTHR10657 38 59 2.3E-18 T 19-04-2016 ALIDE2_RS02345 290f9e270a9210d508da5511aab266e7 275 Gene3D G3DSA:3.10.50.40 114 242 7.4E-25 T 19-04-2016 ALIDE2_RS11440 bc54cee8ad015576e1d02288b2c499c6 259 SUPERFAMILY SSF46785 9 90 9.73E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11440 bc54cee8ad015576e1d02288b2c499c6 259 SMART SM00345 18 77 8.3E-21 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS11440 bc54cee8ad015576e1d02288b2c499c6 259 PANTHER PTHR11751 16 116 4.9E-23 T 19-04-2016 ALIDE2_RS11440 bc54cee8ad015576e1d02288b2c499c6 259 Pfam PF07729 FCD domain 100 225 8.9E-25 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS11440 bc54cee8ad015576e1d02288b2c499c6 259 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 8.3E-8 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS11440 bc54cee8ad015576e1d02288b2c499c6 259 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 8.3E-8 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS11440 bc54cee8ad015576e1d02288b2c499c6 259 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 1.2E-21 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS11440 bc54cee8ad015576e1d02288b2c499c6 259 SMART SM00895 100 226 1.9E-23 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS11440 bc54cee8ad015576e1d02288b2c499c6 259 Gene3D G3DSA:1.10.10.10 11 79 9.9E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11440 bc54cee8ad015576e1d02288b2c499c6 259 SUPERFAMILY SSF48008 97 231 1.39E-28 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS11440 bc54cee8ad015576e1d02288b2c499c6 259 Gene3D G3DSA:1.20.120.530 94 234 3.1E-30 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS15795 42c22e05cba2e979be1d5a3984447f45 253 PANTHER PTHR30292 1 253 1.6E-112 T 19-04-2016 ALIDE2_RS15795 42c22e05cba2e979be1d5a3984447f45 253 SUPERFAMILY SSF88713 4 252 8.89E-97 T 19-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ALIDE2_RS15795 42c22e05cba2e979be1d5a3984447f45 253 Pfam PF03746 LamB/YcsF family 5 243 2.3E-99 T 19-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF ALIDE2_RS15795 42c22e05cba2e979be1d5a3984447f45 253 PANTHER PTHR30292:SF0 1 253 1.6E-112 T 19-04-2016 ALIDE2_RS15795 42c22e05cba2e979be1d5a3984447f45 253 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 3 247 45.157 T 19-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF ALIDE2_RS02780 0dc68b1dfadee9b9b88d443c2a32196f 268 PANTHER PTHR24322 13 139 8.6E-14 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS02780 0dc68b1dfadee9b9b88d443c2a32196f 268 PANTHER PTHR24322 164 194 8.6E-14 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS02780 0dc68b1dfadee9b9b88d443c2a32196f 268 Gene3D G3DSA:3.40.50.720 11 251 7.1E-41 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS02780 0dc68b1dfadee9b9b88d443c2a32196f 268 SUPERFAMILY SSF51735 8 251 2.76E-38 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS02780 0dc68b1dfadee9b9b88d443c2a32196f 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 1.6E-21 T 19-04-2016 ALIDE2_RS02780 0dc68b1dfadee9b9b88d443c2a32196f 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 3.2E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS02780 0dc68b1dfadee9b9b88d443c2a32196f 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 3.2E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS02780 0dc68b1dfadee9b9b88d443c2a32196f 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 3.2E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS02780 0dc68b1dfadee9b9b88d443c2a32196f 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 3.2E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS02780 0dc68b1dfadee9b9b88d443c2a32196f 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.2E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS04490 ec974b481787c40ec77d2da33c68618e 360 Gene3D G3DSA:3.30.160.20 212 288 5.5E-34 T 19-04-2016 IPR014720 Double-stranded RNA-binding domain ALIDE2_RS04490 ec974b481787c40ec77d2da33c68618e 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 19-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ALIDE2_RS04490 ec974b481787c40ec77d2da33c68618e 360 Pfam PF03462 PCRF domain 14 203 1.8E-73 T 19-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 ALIDE2_RS04490 ec974b481787c40ec77d2da33c68618e 360 Pfam PF00472 RF-1 domain 213 321 1.3E-39 T 19-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ALIDE2_RS04490 ec974b481787c40ec77d2da33c68618e 360 SMART SM00937 63 178 3.9E-67 T 19-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 ALIDE2_RS04490 ec974b481787c40ec77d2da33c68618e 360 SUPERFAMILY SSF75620 13 352 1.57E-132 T 19-04-2016 ALIDE2_RS04490 ec974b481787c40ec77d2da33c68618e 360 PANTHER PTHR11075 1 356 7.6E-169 T 19-04-2016 ALIDE2_RS04490 ec974b481787c40ec77d2da33c68618e 360 Gene3D G3DSA:1.20.58.410 8 93 8.2E-17 T 19-04-2016 ALIDE2_RS04490 ec974b481787c40ec77d2da33c68618e 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 357 7.0E-155 T 19-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 ALIDE2_RS04490 ec974b481787c40ec77d2da33c68618e 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 39.549 T 19-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 ALIDE2_RS04490 ec974b481787c40ec77d2da33c68618e 360 PANTHER PTHR11075:SF9 1 356 7.6E-169 T 19-04-2016 ALIDE2_RS17805 b719a236ff0318393ffa7e0c67411279 254 Pfam PF13531 Bacterial extracellular solute-binding protein 30 252 2.5E-45 T 19-04-2016 ALIDE2_RS17805 b719a236ff0318393ffa7e0c67411279 254 PANTHER PTHR30632 6 252 5.1E-39 T 19-04-2016 ALIDE2_RS17805 b719a236ff0318393ffa7e0c67411279 254 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 251 1.2E-70 T 19-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 ALIDE2_RS17805 b719a236ff0318393ffa7e0c67411279 254 Gene3D G3DSA:3.40.190.10 116 213 2.1E-37 T 19-04-2016 ALIDE2_RS17805 b719a236ff0318393ffa7e0c67411279 254 SUPERFAMILY SSF53850 28 253 3.26E-61 T 19-04-2016 ALIDE2_RS17805 b719a236ff0318393ffa7e0c67411279 254 Gene3D G3DSA:3.40.190.10 27 115 5.4E-11 T 19-04-2016 ALIDE2_RS17805 b719a236ff0318393ffa7e0c67411279 254 Gene3D G3DSA:3.40.190.10 214 252 5.4E-11 T 19-04-2016 ALIDE2_RS17805 b719a236ff0318393ffa7e0c67411279 254 PIRSF PIRSF004846 6 254 3.1E-48 T 19-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 ALIDE2_RS01825 2fcaf6e4dfd631ad2f8472a0b44ba5df 167 SUPERFAMILY SSF52833 30 166 5.28E-37 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS01825 2fcaf6e4dfd631ad2f8472a0b44ba5df 167 PANTHER PTHR10681 31 163 4.8E-31 T 19-04-2016 ALIDE2_RS01825 2fcaf6e4dfd631ad2f8472a0b44ba5df 167 PANTHER PTHR10681:SF107 31 163 4.8E-31 T 19-04-2016 ALIDE2_RS01825 2fcaf6e4dfd631ad2f8472a0b44ba5df 167 Gene3D G3DSA:3.40.30.10 8 166 2.3E-42 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS01825 2fcaf6e4dfd631ad2f8472a0b44ba5df 167 Pfam PF08534 Redoxin 28 151 7.6E-26 T 19-04-2016 IPR013740 Redoxin GO:0016491 ALIDE2_RS08410 5451972fa3b00a1cb939b894db8ee79a 401 Pfam PF02515 CoA-transferase family III 10 377 3.5E-127 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS08410 5451972fa3b00a1cb939b894db8ee79a 401 PANTHER PTHR24023 51 387 2.1E-30 T 19-04-2016 ALIDE2_RS08410 5451972fa3b00a1cb939b894db8ee79a 401 PANTHER PTHR24023:SF593 51 387 2.1E-30 T 19-04-2016 ALIDE2_RS08410 5451972fa3b00a1cb939b894db8ee79a 401 SUPERFAMILY SSF89796 9 400 1.7E-133 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS08410 5451972fa3b00a1cb939b894db8ee79a 401 Gene3D G3DSA:3.40.50.10540 310 400 2.4E-109 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS08410 5451972fa3b00a1cb939b894db8ee79a 401 Gene3D G3DSA:3.40.50.10540 8 221 2.4E-109 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS08410 5451972fa3b00a1cb939b894db8ee79a 401 Gene3D G3DSA:3.30.1540.10 228 309 7.5E-31 T 19-04-2016 ALIDE2_RS07625 51eb5c596d168fcdb748aac93057a6ed 399 Pfam PF02515 CoA-transferase family III 11 375 4.8E-110 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS07625 51eb5c596d168fcdb748aac93057a6ed 399 PANTHER PTHR24023:SF593 47 386 3.1E-25 T 19-04-2016 ALIDE2_RS07625 51eb5c596d168fcdb748aac93057a6ed 399 SUPERFAMILY SSF89796 5 399 2.49E-126 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07625 51eb5c596d168fcdb748aac93057a6ed 399 Gene3D G3DSA:3.40.50.10540 7 220 9.3E-102 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07625 51eb5c596d168fcdb748aac93057a6ed 399 Gene3D G3DSA:3.40.50.10540 311 399 9.3E-102 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07625 51eb5c596d168fcdb748aac93057a6ed 399 PANTHER PTHR24023 47 386 3.1E-25 T 19-04-2016 ALIDE2_RS07625 51eb5c596d168fcdb748aac93057a6ed 399 Gene3D G3DSA:3.30.1540.10 226 310 1.8E-25 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 340 8.2E-83 T 19-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1365 0.0 T 19-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 Pfam PF04998 RNA polymerase Rpb1, domain 5 765 1314 9.3E-75 T 19-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 Pfam PF04983 RNA polymerase Rpb1, domain 3 487 643 4.2E-22 T 19-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 SMART SM00663 233 512 3.0E-169 T 19-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 Pfam PF00623 RNA polymerase Rpb1, domain 2 390 483 8.9E-27 T 19-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 Pfam PF00623 RNA polymerase Rpb1, domain 2 342 393 4.6E-8 T 19-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 PANTHER PTHR19376 961 1156 0.0 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 PANTHER PTHR19376 1301 1385 0.0 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 PANTHER PTHR19376 569 942 0.0 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 PANTHER PTHR19376 1175 1260 0.0 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 PANTHER PTHR19376 4 549 0.0 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 Pfam PF05000 RNA polymerase Rpb1, domain 4 673 762 3.9E-19 T 19-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 Gene3D G3DSA:2.40.50.100 1155 1206 7.7E-8 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 Gene3D G3DSA:2.40.50.100 979 1018 3.3E-6 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1374 10.365 T 19-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 SUPERFAMILY SSF64484 1132 1361 0.0 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 SUPERFAMILY SSF64484 17 943 0.0 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 PANTHER PTHR19376:SF32 961 1156 0.0 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 PANTHER PTHR19376:SF32 1301 1385 0.0 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 PANTHER PTHR19376:SF32 569 942 0.0 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 PANTHER PTHR19376:SF32 1175 1260 0.0 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 PANTHER PTHR19376:SF32 4 549 0.0 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 Gene3D G3DSA:2.40.40.20 415 487 2.7E-36 T 19-04-2016 ALIDE2_RS02055 862edc7accfdd4415b79bd44b48a1503 1409 Gene3D G3DSA:2.40.40.20 347 374 2.7E-36 T 19-04-2016 ALIDE2_RS06400 a345531522cb34634cf6b7443a2bfe43 419 Pfam PF02653 Branched-chain amino acid transport system / permease component 115 401 1.3E-51 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06400 a345531522cb34634cf6b7443a2bfe43 419 PANTHER PTHR30482:SF9 66 419 5.4E-168 T 19-04-2016 ALIDE2_RS06400 a345531522cb34634cf6b7443a2bfe43 419 Pfam PF11862 Domain of unknown function (DUF3382) 15 106 2.3E-17 T 19-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal ALIDE2_RS06400 a345531522cb34634cf6b7443a2bfe43 419 PANTHER PTHR30482 66 419 5.4E-168 T 19-04-2016 ALIDE2_RS17790 bc661a17e990dc0160e62071856da40e 236 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS17790 bc661a17e990dc0160e62071856da40e 236 Gene3D G3DSA:3.40.50.300 3 225 1.5E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17790 bc661a17e990dc0160e62071856da40e 236 PANTHER PTHR24220 7 225 1.1E-84 T 19-04-2016 ALIDE2_RS17790 bc661a17e990dc0160e62071856da40e 236 SUPERFAMILY SSF52540 4 229 9.69E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17790 bc661a17e990dc0160e62071856da40e 236 Pfam PF00005 ABC transporter 21 163 7.7E-24 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS17790 bc661a17e990dc0160e62071856da40e 236 PANTHER PTHR24220:SF469 7 225 1.1E-84 T 19-04-2016 ALIDE2_RS17790 bc661a17e990dc0160e62071856da40e 236 SMART SM00382 30 215 4.1E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS20915 304c92a02f801eaa5ec808d1374063d3 386 SUPERFAMILY SSF160544 242 349 1.44E-38 T 19-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal ALIDE2_RS20915 304c92a02f801eaa5ec808d1374063d3 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 226 243 1.3E-33 T 19-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ALIDE2_RS20915 304c92a02f801eaa5ec808d1374063d3 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 270 285 1.3E-33 T 19-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ALIDE2_RS20915 304c92a02f801eaa5ec808d1374063d3 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 8 30 1.3E-33 T 19-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ALIDE2_RS20915 304c92a02f801eaa5ec808d1374063d3 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 300 321 1.3E-33 T 19-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ALIDE2_RS20915 304c92a02f801eaa5ec808d1374063d3 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 206 224 1.3E-33 T 19-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ALIDE2_RS20915 304c92a02f801eaa5ec808d1374063d3 386 Gene3D G3DSA:3.40.1690.10 217 351 6.5E-58 T 19-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal ALIDE2_RS20915 304c92a02f801eaa5ec808d1374063d3 386 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 345 7.0E-109 T 19-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ALIDE2_RS20915 304c92a02f801eaa5ec808d1374063d3 386 PANTHER PTHR30531 1 359 4.6E-103 T 19-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ALIDE2_RS22365 61640b09fb1bed9e278846028eaa53b1 258 SUPERFAMILY SSF53448 7 252 1.49E-43 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS22365 61640b09fb1bed9e278846028eaa53b1 258 PANTHER PTHR22572 13 252 2.4E-26 T 19-04-2016 ALIDE2_RS22365 61640b09fb1bed9e278846028eaa53b1 258 Gene3D G3DSA:3.90.550.10 13 253 5.5E-38 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS22365 61640b09fb1bed9e278846028eaa53b1 258 Pfam PF12804 MobA-like NTP transferase domain 13 75 1.8E-12 T 19-04-2016 IPR025877 MobA-like NTP transferase ALIDE2_RS22855 111d85a40a0837148827d306786a2405 406 SUPERFAMILY SSF54106 66 115 6.41E-7 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS22855 111d85a40a0837148827d306786a2405 406 Pfam PF01476 LysM domain 68 114 5.5E-10 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS22855 111d85a40a0837148827d306786a2405 406 PANTHER PTHR34700:SF2 59 254 2.5E-35 T 19-04-2016 ALIDE2_RS22855 111d85a40a0837148827d306786a2405 406 PANTHER PTHR34700:SF2 270 401 2.5E-35 T 19-04-2016 ALIDE2_RS22855 111d85a40a0837148827d306786a2405 406 Gene3D G3DSA:3.10.350.10 66 115 2.7E-7 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS22855 111d85a40a0837148827d306786a2405 406 SMART SM00257 67 116 0.0067 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS22855 111d85a40a0837148827d306786a2405 406 PANTHER PTHR34700 59 254 2.5E-35 T 19-04-2016 ALIDE2_RS22855 111d85a40a0837148827d306786a2405 406 PANTHER PTHR34700 270 401 2.5E-35 T 19-04-2016 ALIDE2_RS03845 c2becf1175266875477a356763cea9a7 316 Hamap MF_00492 Transaldolase [tal]. 1 316 47.455 T 19-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 ALIDE2_RS03845 c2becf1175266875477a356763cea9a7 316 SUPERFAMILY SSF51569 1 313 8.48E-108 T 19-04-2016 ALIDE2_RS03845 c2becf1175266875477a356763cea9a7 316 TIGRFAM TIGR00874 talAB: transaldolase 2 314 1.6E-132 T 19-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 ALIDE2_RS03845 c2becf1175266875477a356763cea9a7 316 Gene3D G3DSA:3.20.20.70 1 314 5.2E-121 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS03845 c2becf1175266875477a356763cea9a7 316 PANTHER PTHR10683 1 314 1.7E-178 T 19-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 ALIDE2_RS03845 c2becf1175266875477a356763cea9a7 316 ProSitePatterns PS00958 Transaldolase active site. 122 139 - T 19-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 ALIDE2_RS03845 c2becf1175266875477a356763cea9a7 316 Pfam PF00923 Transaldolase 13 310 6.3E-92 T 19-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 ALIDE2_RS03845 c2becf1175266875477a356763cea9a7 316 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 19-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 ALIDE2_RS03845 c2becf1175266875477a356763cea9a7 316 PANTHER PTHR10683:SF18 1 314 1.7E-178 T 19-04-2016 ALIDE2_RS07815 d5fcceb2fa093de54ab0f18be4736a4c 322 Pfam PF01609 Transposase DDE domain 136 310 2.8E-30 T 19-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS07815 d5fcceb2fa093de54ab0f18be4736a4c 322 PANTHER PTHR35604:SF2 2 322 9.1E-221 T 19-04-2016 ALIDE2_RS07815 d5fcceb2fa093de54ab0f18be4736a4c 322 Pfam PF05598 Transposase domain (DUF772) 50 124 1.5E-20 T 19-04-2016 IPR008490 Transposase InsH, N-terminal ALIDE2_RS07815 d5fcceb2fa093de54ab0f18be4736a4c 322 PANTHER PTHR35604 2 322 9.1E-221 T 19-04-2016 ALIDE2_RS02445 ea941bf9f6d14da065f958bd149547b5 85 Gene3D G3DSA:1.20.80.10 1 83 3.6E-28 T 19-04-2016 IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle ALIDE2_RS02445 ea941bf9f6d14da065f958bd149547b5 85 SUPERFAMILY SSF47027 4 83 8.24E-27 T 19-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 ALIDE2_RS02445 ea941bf9f6d14da065f958bd149547b5 85 PRINTS PR00689 Acyl-coA-binding protein signature 5 20 2.2E-17 T 19-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 ALIDE2_RS02445 ea941bf9f6d14da065f958bd149547b5 85 PRINTS PR00689 Acyl-coA-binding protein signature 22 40 2.2E-17 T 19-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 ALIDE2_RS02445 ea941bf9f6d14da065f958bd149547b5 85 PRINTS PR00689 Acyl-coA-binding protein signature 66 83 2.2E-17 T 19-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 ALIDE2_RS02445 ea941bf9f6d14da065f958bd149547b5 85 PRINTS PR00689 Acyl-coA-binding protein signature 45 60 2.2E-17 T 19-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 ALIDE2_RS02445 ea941bf9f6d14da065f958bd149547b5 85 PANTHER PTHR23310 1 83 1.3E-30 T 19-04-2016 ALIDE2_RS02445 ea941bf9f6d14da065f958bd149547b5 85 Pfam PF00887 Acyl CoA binding protein 6 83 3.4E-25 T 19-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 ALIDE2_RS21440 6a336ae16944c62e721e680ac54a53b6 303 SMART SM00382 40 209 6.3E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS21440 6a336ae16944c62e721e680ac54a53b6 303 PANTHER PTHR22908 11 299 5.0E-81 T 19-04-2016 ALIDE2_RS21440 6a336ae16944c62e721e680ac54a53b6 303 Gene3D G3DSA:3.40.50.300 32 226 6.1E-30 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21440 6a336ae16944c62e721e680ac54a53b6 303 PANTHER PTHR22908:SF67 11 299 5.0E-81 T 19-04-2016 ALIDE2_RS21440 6a336ae16944c62e721e680ac54a53b6 303 SUPERFAMILY SSF52540 116 281 3.16E-34 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21440 6a336ae16944c62e721e680ac54a53b6 303 SUPERFAMILY SSF52540 28 86 3.16E-34 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21440 6a336ae16944c62e721e680ac54a53b6 303 Pfam PF07728 AAA domain (dynein-related subfamily) 43 195 3.8E-12 T 19-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 ALIDE2_RS21880 de016bd01a79627e2766c4f826bea4f7 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.8E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21880 de016bd01a79627e2766c4f826bea4f7 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.8E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21880 de016bd01a79627e2766c4f826bea4f7 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.8E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21880 de016bd01a79627e2766c4f826bea4f7 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.8E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21880 de016bd01a79627e2766c4f826bea4f7 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.8E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21880 de016bd01a79627e2766c4f826bea4f7 255 Gene3D G3DSA:3.40.50.720 3 254 4.1E-65 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21880 de016bd01a79627e2766c4f826bea4f7 255 PIRSF PIRSF000094 2 255 2.6E-87 T 19-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 ALIDE2_RS21880 de016bd01a79627e2766c4f826bea4f7 255 SUPERFAMILY SSF51735 6 254 2.02E-66 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21880 de016bd01a79627e2766c4f826bea4f7 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 252 2.0E-83 T 19-04-2016 ALIDE2_RS21880 de016bd01a79627e2766c4f826bea4f7 255 PANTHER PTHR24322 159 191 2.3E-51 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21880 de016bd01a79627e2766c4f826bea4f7 255 PANTHER PTHR24322 12 143 2.3E-51 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21880 de016bd01a79627e2766c4f826bea4f7 255 PANTHER PTHR24322:SF317 159 191 2.3E-51 T 19-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 ALIDE2_RS21880 de016bd01a79627e2766c4f826bea4f7 255 PANTHER PTHR24322:SF317 12 143 2.3E-51 T 19-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 ALIDE2_RS09720 09604158fbdfb67d0d79d0899795d167 121 SUPERFAMILY SSF46955 4 109 4.76E-16 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS09720 09604158fbdfb67d0d79d0899795d167 121 SMART SM00422 4 73 1.2E-17 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS09720 09604158fbdfb67d0d79d0899795d167 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 1.8E-14 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS09720 09604158fbdfb67d0d79d0899795d167 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 1.8E-14 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS09720 09604158fbdfb67d0d79d0899795d167 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 1.8E-14 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS09720 09604158fbdfb67d0d79d0899795d167 121 Pfam PF13411 MerR HTH family regulatory protein 4 72 1.3E-10 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS09720 09604158fbdfb67d0d79d0899795d167 121 TIGRFAM TIGR02054 MerD: mercuric resistence transcriptional repressor protein MerD 1 119 6.6E-65 T 19-04-2016 IPR011797 Mercuric resistence transcriptional repressor protein MerD GO:0003677|GO:0045892|GO:0046689 ALIDE2_RS09720 09604158fbdfb67d0d79d0899795d167 121 Gene3D G3DSA:1.10.1660.10 4 109 1.1E-16 T 19-04-2016 ALIDE2_RS16245 ae6d5f88af7d1cec07173c5b79210632 157 PANTHER PTHR31793:SF7 9 155 2.2E-56 T 19-04-2016 ALIDE2_RS16245 ae6d5f88af7d1cec07173c5b79210632 157 SUPERFAMILY SSF54637 22 155 1.0E-35 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS16245 ae6d5f88af7d1cec07173c5b79210632 157 Pfam PF03061 Thioesterase superfamily 41 122 2.8E-13 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS16245 ae6d5f88af7d1cec07173c5b79210632 157 Gene3D G3DSA:3.10.129.10 16 155 2.3E-46 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS16245 ae6d5f88af7d1cec07173c5b79210632 157 PANTHER PTHR31793 9 155 2.2E-56 T 19-04-2016 ALIDE2_RS09075 d88b9187c94fe90b6ce03e8b8dc80f02 99 PANTHER PTHR10245 1 84 3.9E-17 T 19-04-2016 ALIDE2_RS09075 d88b9187c94fe90b6ce03e8b8dc80f02 99 SMART SM00530 28 83 7.1E-11 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS09075 d88b9187c94fe90b6ce03e8b8dc80f02 99 Gene3D G3DSA:1.10.260.40 22 90 8.8E-19 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS09075 d88b9187c94fe90b6ce03e8b8dc80f02 99 PANTHER PTHR10245:SF41 1 84 3.9E-17 T 19-04-2016 ALIDE2_RS09075 d88b9187c94fe90b6ce03e8b8dc80f02 99 Pfam PF01381 Helix-turn-helix 29 81 4.6E-11 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS09075 d88b9187c94fe90b6ce03e8b8dc80f02 99 SUPERFAMILY SSF47413 23 88 1.44E-15 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS15105 d89bf95549ba837f3ab4dfdfb007b2d1 266 Gene3D G3DSA:3.40.50.720 6 205 1.9E-58 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS15105 d89bf95549ba837f3ab4dfdfb007b2d1 266 PANTHER PTHR24322 11 143 1.0E-54 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15105 d89bf95549ba837f3ab4dfdfb007b2d1 266 PANTHER PTHR24322 159 195 1.0E-54 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15105 d89bf95549ba837f3ab4dfdfb007b2d1 266 PANTHER PTHR24322:SF317 11 143 1.0E-54 T 19-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 ALIDE2_RS15105 d89bf95549ba837f3ab4dfdfb007b2d1 266 PANTHER PTHR24322:SF317 159 195 1.0E-54 T 19-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 ALIDE2_RS15105 d89bf95549ba837f3ab4dfdfb007b2d1 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 3.7E-7 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15105 d89bf95549ba837f3ab4dfdfb007b2d1 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.7E-7 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15105 d89bf95549ba837f3ab4dfdfb007b2d1 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 3.7E-7 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15105 d89bf95549ba837f3ab4dfdfb007b2d1 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 3.7E-7 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15105 d89bf95549ba837f3ab4dfdfb007b2d1 266 SUPERFAMILY SSF51735 6 256 2.1E-58 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS15105 d89bf95549ba837f3ab4dfdfb007b2d1 266 PIRSF PIRSF000094 1 264 1.6E-107 T 19-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 ALIDE2_RS15105 d89bf95549ba837f3ab4dfdfb007b2d1 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 256 1.9E-80 T 19-04-2016 ALIDE2_RS22525 029cfd17eaddb7ca44b7275d547dc355 276 PANTHER PTHR12835 4 272 9.6E-46 T 19-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 ALIDE2_RS22525 029cfd17eaddb7ca44b7275d547dc355 276 Gene3D G3DSA:2.30.30.100 232 275 6.4E-9 T 19-04-2016 ALIDE2_RS22525 029cfd17eaddb7ca44b7275d547dc355 276 Gene3D G3DSA:3.30.930.10 14 229 2.7E-49 T 19-04-2016 ALIDE2_RS22525 029cfd17eaddb7ca44b7275d547dc355 276 Pfam PF03099 Biotin/lipoate A/B protein ligase family 32 170 2.1E-8 T 19-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 ALIDE2_RS22525 029cfd17eaddb7ca44b7275d547dc355 276 Pfam PF02237 Biotin protein ligase C terminal domain 233 273 2.3E-7 T 19-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 ALIDE2_RS22525 029cfd17eaddb7ca44b7275d547dc355 276 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 28 272 3.0E-38 T 19-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 ALIDE2_RS22525 029cfd17eaddb7ca44b7275d547dc355 276 SUPERFAMILY SSF55681 14 229 1.04E-36 T 19-04-2016 ALIDE2_RS09355 a8fb2916da3f03626adeea21ea68dda0 534 SUPERFAMILY SSF52096 28 265 3.13E-63 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS09355 a8fb2916da3f03626adeea21ea68dda0 534 PANTHER PTHR22855:SF13 1 534 3.3E-275 T 19-04-2016 ALIDE2_RS09355 a8fb2916da3f03626adeea21ea68dda0 534 SUPERFAMILY SSF52096 277 534 8.57E-74 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS09355 a8fb2916da3f03626adeea21ea68dda0 534 PANTHER PTHR22855 1 534 3.3E-275 T 19-04-2016 ALIDE2_RS09355 a8fb2916da3f03626adeea21ea68dda0 534 Pfam PF01039 Carboxyl transferase domain 48 524 6.7E-132 T 19-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS09355 a8fb2916da3f03626adeea21ea68dda0 534 Gene3D G3DSA:3.90.226.10 31 264 2.0E-68 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS09355 a8fb2916da3f03626adeea21ea68dda0 534 Gene3D G3DSA:3.90.226.10 279 529 1.1E-76 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS00555 121e8ed50fa23aa5660d1b277d380fa7 387 PANTHER PTHR10909 1 387 9.9E-220 T 19-04-2016 ALIDE2_RS00555 121e8ed50fa23aa5660d1b277d380fa7 387 PANTHER PTHR10909:SF241 1 387 9.9E-220 T 19-04-2016 ALIDE2_RS00555 121e8ed50fa23aa5660d1b277d380fa7 387 SUPERFAMILY SSF56645 1 245 8.9E-65 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS00555 121e8ed50fa23aa5660d1b277d380fa7 387 SUPERFAMILY SSF47203 230 385 1.61E-46 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00555 121e8ed50fa23aa5660d1b277d380fa7 387 Gene3D G3DSA:1.10.540.10 3 119 2.1E-34 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00555 121e8ed50fa23aa5660d1b277d380fa7 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 2.4E-18 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS00555 121e8ed50fa23aa5660d1b277d380fa7 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 361 3.0E-35 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00555 121e8ed50fa23aa5660d1b277d380fa7 387 Gene3D G3DSA:1.20.140.10 222 386 5.6E-57 T 19-04-2016 ALIDE2_RS00555 121e8ed50fa23aa5660d1b277d380fa7 387 Gene3D G3DSA:2.40.110.10 122 221 4.9E-28 T 19-04-2016 ALIDE2_RS00555 121e8ed50fa23aa5660d1b277d380fa7 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 6.9E-27 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS03200 d78821252d1869d836b634ef6901b08c 603 SUPERFAMILY SSF90123 23 347 6.54E-63 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ALIDE2_RS03200 d78821252d1869d836b634ef6901b08c 603 PANTHER PTHR24221 21 601 4.0E-304 T 19-04-2016 ALIDE2_RS03200 d78821252d1869d836b634ef6901b08c 603 PANTHER PTHR24221:SF250 21 601 4.0E-304 T 19-04-2016 ALIDE2_RS03200 d78821252d1869d836b634ef6901b08c 603 SUPERFAMILY SSF52540 358 595 1.68E-91 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03200 d78821252d1869d836b634ef6901b08c 603 Pfam PF00664 ABC transporter transmembrane region 37 310 1.6E-34 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ALIDE2_RS03200 d78821252d1869d836b634ef6901b08c 603 Gene3D G3DSA:1.20.1560.10 23 340 1.2E-63 T 19-04-2016 ALIDE2_RS03200 d78821252d1869d836b634ef6901b08c 603 SMART SM00382 385 577 2.8E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS03200 d78821252d1869d836b634ef6901b08c 603 Pfam PF00005 ABC transporter 376 525 4.6E-34 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS03200 d78821252d1869d836b634ef6901b08c 603 ProSitePatterns PS00211 ABC transporters family signature. 497 511 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS03200 d78821252d1869d836b634ef6901b08c 603 Gene3D G3DSA:3.40.50.300 358 590 3.0E-86 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22580 fa4ef09e90be235a05f65e6418227282 342 PIRSF PIRSF017082 10 342 7.3E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22580 fa4ef09e90be235a05f65e6418227282 342 Gene3D G3DSA:3.40.190.10 143 237 2.9E-6 T 19-04-2016 ALIDE2_RS22580 fa4ef09e90be235a05f65e6418227282 342 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 64 339 8.8E-78 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22580 fa4ef09e90be235a05f65e6418227282 342 PANTHER PTHR30349:SF16 12 301 2.4E-76 T 19-04-2016 ALIDE2_RS22580 fa4ef09e90be235a05f65e6418227282 342 SUPERFAMILY SSF53850 127 307 1.96E-11 T 19-04-2016 ALIDE2_RS22580 fa4ef09e90be235a05f65e6418227282 342 PANTHER PTHR30349 12 301 2.4E-76 T 19-04-2016 ALIDE2_RS08320 94418887493dfac33ee9d61c5b0fc2b9 105 Pfam PF13937 Domain of unknown function (DUF4212) 25 90 2.7E-16 T 19-04-2016 IPR019886 Sodium symporter small subunit, predicted ALIDE2_RS08320 94418887493dfac33ee9d61c5b0fc2b9 105 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 26 90 1.5E-17 T 19-04-2016 IPR019886 Sodium symporter small subunit, predicted ALIDE2_RS05445 bc36491a4ca0c003201caa7bb39d97c2 464 TIGRFAM TIGR03013 EpsB_2: sugar transferase, PEP-CTERM system associated 22 463 9.6E-147 T 19-04-2016 IPR017464 Sugar transferase, PEP-CTERM system associated ALIDE2_RS05445 bc36491a4ca0c003201caa7bb39d97c2 464 PANTHER PTHR30576:SF0 10 464 2.9E-104 T 19-04-2016 ALIDE2_RS05445 bc36491a4ca0c003201caa7bb39d97c2 464 Gene3D G3DSA:3.40.50.720 139 216 4.8E-4 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS05445 bc36491a4ca0c003201caa7bb39d97c2 464 Pfam PF02397 Bacterial sugar transferase 275 458 5.8E-57 T 19-04-2016 IPR003362 Bacterial sugar transferase ALIDE2_RS05445 bc36491a4ca0c003201caa7bb39d97c2 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 33 463 1.3E-119 T 19-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase ALIDE2_RS05445 bc36491a4ca0c003201caa7bb39d97c2 464 PANTHER PTHR30576 10 464 2.9E-104 T 19-04-2016 ALIDE2_RS03205 577c785c6dfb28a353787c68e712ca70 110 Gene3D G3DSA:1.10.287.1080 1 96 1.3E-27 T 19-04-2016 ALIDE2_RS03205 577c785c6dfb28a353787c68e712ca70 110 SUPERFAMILY SSF101386 1 104 2.04E-36 T 19-04-2016 ALIDE2_RS03205 577c785c6dfb28a353787c68e712ca70 110 Pfam PF12643 MazG-like family 33 107 3.8E-17 T 19-04-2016 IPR025984 MazG-like domain KEGG: 00240+3.6.1.12 ALIDE2_RS03205 577c785c6dfb28a353787c68e712ca70 110 PIRSF PIRSF029826 1 110 4.9E-44 T 19-04-2016 IPR011394 NTP Pyrophosphohydrolase MazG-related, RS21-C6 ALIDE2_RS03205 577c785c6dfb28a353787c68e712ca70 110 PANTHER PTHR14552 1 104 3.4E-37 T 19-04-2016 ALIDE2_RS07030 e8a13f3f95636b18387b6115f407e82b 298 PANTHER PTHR34475 8 297 1.0E-14 T 19-04-2016 ALIDE2_RS07030 e8a13f3f95636b18387b6115f407e82b 298 Pfam PF13413 Helix-turn-helix domain 25 85 1.6E-13 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS07030 e8a13f3f95636b18387b6115f407e82b 298 PANTHER PTHR34475:SF1 8 297 1.0E-14 T 19-04-2016 ALIDE2_RS07030 e8a13f3f95636b18387b6115f407e82b 298 Gene3D G3DSA:1.10.260.40 20 72 4.5E-4 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS07030 e8a13f3f95636b18387b6115f407e82b 298 Pfam PF13464 Domain of unknown function (DUF4115) 224 297 3.8E-19 T 19-04-2016 IPR025194 Domain of unknown function DUF4115 ALIDE2_RS22005 daa638506167d647fbf21cdee29a19f8 151 Pfam PF09980 Predicted membrane protein (DUF2214) 4 149 5.3E-49 T 19-04-2016 IPR018706 Protein of unknown function DUF2214, membrane ALIDE2_RS01435 d106771a89c33de9e7e9d71e6d506357 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 321 7.2E-90 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01435 d106771a89c33de9e7e9d71e6d506357 326 PIRSF PIRSF017082 1 326 7.9E-86 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01435 d106771a89c33de9e7e9d71e6d506357 326 Gene3D G3DSA:3.40.190.10 128 222 8.0E-4 T 19-04-2016 ALIDE2_RS01435 d106771a89c33de9e7e9d71e6d506357 326 SUPERFAMILY SSF53850 114 287 4.42E-18 T 19-04-2016 ALIDE2_RS01435 d106771a89c33de9e7e9d71e6d506357 326 PANTHER PTHR30349:SF16 1 291 1.6E-92 T 19-04-2016 ALIDE2_RS01435 d106771a89c33de9e7e9d71e6d506357 326 PANTHER PTHR30349 1 291 1.6E-92 T 19-04-2016 ALIDE2_RS14335 73d91b48663540a72a539b39c770d7d2 303 Pfam PF00701 Dihydrodipicolinate synthetase family 12 298 1.5E-51 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS14335 73d91b48663540a72a539b39c770d7d2 303 SUPERFAMILY SSF51569 10 299 8.79E-68 T 19-04-2016 ALIDE2_RS14335 73d91b48663540a72a539b39c770d7d2 303 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 4 302 49.833 T 19-04-2016 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501|UniPathway: UPA00564 ALIDE2_RS14335 73d91b48663540a72a539b39c770d7d2 303 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 3 300 2.7E-129 T 19-04-2016 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501|UniPathway: UPA00564 ALIDE2_RS14335 73d91b48663540a72a539b39c770d7d2 303 Gene3D G3DSA:3.20.20.70 4 301 6.5E-74 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS14335 73d91b48663540a72a539b39c770d7d2 303 SMART SM01130 10 301 9.5E-78 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS14335 73d91b48663540a72a539b39c770d7d2 303 PANTHER PTHR12128 1 302 2.0E-122 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS14335 73d91b48663540a72a539b39c770d7d2 303 PANTHER PTHR12128:SF19 1 302 2.0E-122 T 19-04-2016 ALIDE2_RS14335 73d91b48663540a72a539b39c770d7d2 303 PIRSF PIRSF001365 7 303 2.2E-56 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS22475 ac8e85f5a76d86e579dc697165f6afba 280 Pfam PF09339 IclR helix-turn-helix domain 21 70 7.7E-11 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS22475 ac8e85f5a76d86e579dc697165f6afba 280 SUPERFAMILY SSF46785 20 92 1.54E-13 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22475 ac8e85f5a76d86e579dc697165f6afba 280 Pfam PF01614 Bacterial transcriptional regulator 140 245 1.8E-13 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS22475 ac8e85f5a76d86e579dc697165f6afba 280 Gene3D G3DSA:1.10.10.10 19 88 3.1E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22475 ac8e85f5a76d86e579dc697165f6afba 280 Gene3D G3DSA:3.30.450.40 89 252 4.3E-35 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS22475 ac8e85f5a76d86e579dc697165f6afba 280 PANTHER PTHR30136 20 245 1.7E-44 T 19-04-2016 ALIDE2_RS22475 ac8e85f5a76d86e579dc697165f6afba 280 SUPERFAMILY SSF55781 84 252 6.54E-36 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS22475 ac8e85f5a76d86e579dc697165f6afba 280 SMART SM00346 19 108 4.3E-17 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS03840 b4cd30a3126a75a38e25bbb0bb656e45 281 Gene3D G3DSA:1.10.10.10 1 77 2.6E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS03840 b4cd30a3126a75a38e25bbb0bb656e45 281 SUPERFAMILY SSF46689 2 76 2.69E-19 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS03840 b4cd30a3126a75a38e25bbb0bb656e45 281 PANTHER PTHR30514:SF1 1 274 2.9E-69 T 19-04-2016 ALIDE2_RS03840 b4cd30a3126a75a38e25bbb0bb656e45 281 ProSitePatterns PS00356 LacI-type HTH domain signature. 35 53 - T 19-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 ALIDE2_RS03840 b4cd30a3126a75a38e25bbb0bb656e45 281 PANTHER PTHR30514 1 274 2.9E-69 T 19-04-2016 ALIDE2_RS03840 b4cd30a3126a75a38e25bbb0bb656e45 281 Pfam PF01380 SIS domain 131 253 5.7E-19 T 19-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 ALIDE2_RS03840 b4cd30a3126a75a38e25bbb0bb656e45 281 Gene3D G3DSA:3.40.50.10490 102 262 3.6E-38 T 19-04-2016 ALIDE2_RS03840 b4cd30a3126a75a38e25bbb0bb656e45 281 SUPERFAMILY SSF53697 95 261 4.58E-38 T 19-04-2016 ALIDE2_RS03840 b4cd30a3126a75a38e25bbb0bb656e45 281 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 74 7.8E-19 T 19-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 ALIDE2_RS18375 09dac9ff73f5e5c264c23de8e5c72e01 210 Gene3D G3DSA:2.50.20.10 22 209 1.1E-56 T 19-04-2016 ALIDE2_RS18375 09dac9ff73f5e5c264c23de8e5c72e01 210 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 6 210 27.674 T 19-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 ALIDE2_RS18375 09dac9ff73f5e5c264c23de8e5c72e01 210 PANTHER PTHR35869 5 210 3.2E-39 T 19-04-2016 ALIDE2_RS18375 09dac9ff73f5e5c264c23de8e5c72e01 210 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 9 207 1.3E-23 T 19-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 ALIDE2_RS18375 09dac9ff73f5e5c264c23de8e5c72e01 210 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 34 200 5.4E-42 T 19-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like ALIDE2_RS18375 09dac9ff73f5e5c264c23de8e5c72e01 210 SUPERFAMILY SSF89392 22 208 2.82E-44 T 19-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX ALIDE2_RS05945 ddc966c7270172ecd0cb94b80c9fe0d9 339 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 100 118 - T 19-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 ALIDE2_RS05945 ddc966c7270172ecd0cb94b80c9fe0d9 339 PANTHER PTHR11082:SF26 12 315 2.1E-130 T 19-04-2016 ALIDE2_RS05945 ddc966c7270172ecd0cb94b80c9fe0d9 339 PANTHER PTHR11082 12 315 2.1E-130 T 19-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ALIDE2_RS05945 ddc966c7270172ecd0cb94b80c9fe0d9 339 Gene3D G3DSA:3.20.20.70 8 248 2.3E-60 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS05945 ddc966c7270172ecd0cb94b80c9fe0d9 339 Pfam PF01207 Dihydrouridine synthase (Dus) 13 243 1.5E-65 T 19-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ALIDE2_RS05945 ddc966c7270172ecd0cb94b80c9fe0d9 339 SUPERFAMILY SSF51395 10 303 1.45E-66 T 19-04-2016 ALIDE2_RS05945 ddc966c7270172ecd0cb94b80c9fe0d9 339 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 16 322 51.902 T 19-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 ALIDE2_RS05945 ddc966c7270172ecd0cb94b80c9fe0d9 339 PIRSF PIRSF006621 1 331 2.1E-75 T 19-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ALIDE2_RS11785 b1acabd03af25db4db1e27128a21390f 335 SUPERFAMILY SSF51735 102 297 4.16E-51 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11785 b1acabd03af25db4db1e27128a21390f 335 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 39 327 8.4E-16 T 19-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS11785 b1acabd03af25db4db1e27128a21390f 335 Gene3D G3DSA:3.40.50.720 114 297 4.1E-57 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11785 b1acabd03af25db4db1e27128a21390f 335 Gene3D G3DSA:3.40.50.720 1 113 2.9E-26 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11785 b1acabd03af25db4db1e27128a21390f 335 SUPERFAMILY SSF52283 1 137 4.04E-20 T 19-04-2016 ALIDE2_RS11785 b1acabd03af25db4db1e27128a21390f 335 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 296 1.2E-49 T 19-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ALIDE2_RS11785 b1acabd03af25db4db1e27128a21390f 335 PANTHER PTHR10996 1 320 7.0E-99 T 19-04-2016 ALIDE2_RS11785 b1acabd03af25db4db1e27128a21390f 335 PANTHER PTHR10996:SF127 1 320 7.0E-99 T 19-04-2016 ALIDE2_RS02400 de3b24fb12106da144b3c9446f44393c 302 SUPERFAMILY SSF51621 6 248 1.63E-60 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS02400 de3b24fb12106da144b3c9446f44393c 302 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 10 237 7.3E-40 T 19-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ALIDE2_RS02400 de3b24fb12106da144b3c9446f44393c 302 PANTHER PTHR32308 4 301 1.1E-86 T 19-04-2016 IPR011206 Citrate lyase beta subunit-like ALIDE2_RS02400 de3b24fb12106da144b3c9446f44393c 302 Gene3D G3DSA:3.20.20.60 4 248 5.9E-76 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS02400 de3b24fb12106da144b3c9446f44393c 302 PANTHER PTHR32308:SF2 4 301 1.1E-86 T 19-04-2016 ALIDE2_RS02400 de3b24fb12106da144b3c9446f44393c 302 PIRSF PIRSF015582 1 302 1.6E-81 T 19-04-2016 IPR011206 Citrate lyase beta subunit-like ALIDE2_RS06660 0c5997e7a2f0f2b5c326892abb3b2a93 769 Gene3D G3DSA:3.40.50.10380 16 167 9.2E-52 T 19-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ALIDE2_RS06660 0c5997e7a2f0f2b5c326892abb3b2a93 769 SUPERFAMILY SSF53223 17 168 5.68E-53 T 19-04-2016 ALIDE2_RS06660 0c5997e7a2f0f2b5c326892abb3b2a93 769 SMART SM01274 25 158 3.6E-79 T 19-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ALIDE2_RS06660 0c5997e7a2f0f2b5c326892abb3b2a93 769 PANTHER PTHR23406 39 449 8.9E-167 T 19-04-2016 ALIDE2_RS06660 0c5997e7a2f0f2b5c326892abb3b2a93 769 Pfam PF00390 Malic enzyme, N-terminal domain 26 157 1.6E-27 T 19-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ALIDE2_RS06660 0c5997e7a2f0f2b5c326892abb3b2a93 769 PIRSF PIRSF036684 6 769 0.0 T 19-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 ALIDE2_RS06660 0c5997e7a2f0f2b5c326892abb3b2a93 769 Pfam PF01515 Phosphate acetyl/butaryl transferase 436 761 6.0E-87 T 19-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 ALIDE2_RS06660 0c5997e7a2f0f2b5c326892abb3b2a93 769 SMART SM00919 170 407 1.9E-141 T 19-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 ALIDE2_RS06660 0c5997e7a2f0f2b5c326892abb3b2a93 769 Gene3D G3DSA:3.40.50.720 168 449 3.3E-88 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS06660 0c5997e7a2f0f2b5c326892abb3b2a93 769 SUPERFAMILY SSF53659 436 764 2.47E-85 T 19-04-2016 ALIDE2_RS06660 0c5997e7a2f0f2b5c326892abb3b2a93 769 Pfam PF03949 Malic enzyme, NAD binding domain 172 366 1.7E-22 T 19-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 ALIDE2_RS06660 0c5997e7a2f0f2b5c326892abb3b2a93 769 Gene3D G3DSA:3.40.50.10750 579 737 4.4E-48 T 19-04-2016 ALIDE2_RS06660 0c5997e7a2f0f2b5c326892abb3b2a93 769 SUPERFAMILY SSF51735 170 448 1.04E-84 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS06660 0c5997e7a2f0f2b5c326892abb3b2a93 769 PANTHER PTHR23406:SF23 39 449 8.9E-167 T 19-04-2016 ALIDE2_RS21305 7d886de90c4caa08f239cba098c7f132 327 Gene3D G3DSA:3.40.50.720 164 283 1.2E-8 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21305 7d886de90c4caa08f239cba098c7f132 327 PANTHER PTHR11695:SF403 13 325 1.5E-150 T 19-04-2016 ALIDE2_RS21305 7d886de90c4caa08f239cba098c7f132 327 Gene3D G3DSA:3.90.180.10 1 163 2.8E-57 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS21305 7d886de90c4caa08f239cba098c7f132 327 PANTHER PTHR11695 13 325 1.5E-150 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS21305 7d886de90c4caa08f239cba098c7f132 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 3.3E-31 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ALIDE2_RS21305 7d886de90c4caa08f239cba098c7f132 327 SUPERFAMILY SSF50129 1 160 1.89E-50 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS21305 7d886de90c4caa08f239cba098c7f132 327 TIGRFAM TIGR02822 adh_fam_2: zinc-binding alcohol dehydrogenase family protein 12 325 2.1E-101 T 19-04-2016 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 ALIDE2_RS21305 7d886de90c4caa08f239cba098c7f132 327 SUPERFAMILY SSF51735 140 292 7.98E-24 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04015 9cea33d6bf2638d729cfc5f94c65d24e 405 PANTHER PTHR30483 1 405 1.5E-190 T 19-04-2016 ALIDE2_RS04015 9cea33d6bf2638d729cfc5f94c65d24e 405 PANTHER PTHR30483:SF17 1 405 1.5E-190 T 19-04-2016 ALIDE2_RS04015 9cea33d6bf2638d729cfc5f94c65d24e 405 SUPERFAMILY SSF53822 28 403 6.39E-81 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS04015 9cea33d6bf2638d729cfc5f94c65d24e 405 Pfam PF13458 Periplasmic binding protein 28 368 1.3E-81 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS04015 9cea33d6bf2638d729cfc5f94c65d24e 405 Gene3D G3DSA:3.40.50.2300 305 358 1.5E-24 T 19-04-2016 ALIDE2_RS04015 9cea33d6bf2638d729cfc5f94c65d24e 405 Gene3D G3DSA:3.40.50.2300 24 155 1.5E-24 T 19-04-2016 ALIDE2_RS04015 9cea33d6bf2638d729cfc5f94c65d24e 405 Gene3D G3DSA:3.40.50.2300 156 304 4.1E-16 T 19-04-2016 ALIDE2_RS15150 9ca13f672a694e17b78063bdaf33b6c4 574 PANTHER PTHR18968:SF120 2 557 3.2E-273 T 19-04-2016 ALIDE2_RS15150 9ca13f672a694e17b78063bdaf33b6c4 574 PANTHER PTHR18968 2 557 3.2E-273 T 19-04-2016 ALIDE2_RS15150 9ca13f672a694e17b78063bdaf33b6c4 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 404 550 3.3E-42 T 19-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ALIDE2_RS15150 9ca13f672a694e17b78063bdaf33b6c4 574 SUPERFAMILY SSF52467 173 372 6.98E-34 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS15150 9ca13f672a694e17b78063bdaf33b6c4 574 SUPERFAMILY SSF52518 382 560 1.57E-59 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS15150 9ca13f672a694e17b78063bdaf33b6c4 574 Gene3D G3DSA:3.40.50.970 21 196 3.1E-60 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS15150 9ca13f672a694e17b78063bdaf33b6c4 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 23 187 1.1E-51 T 19-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ALIDE2_RS15150 9ca13f672a694e17b78063bdaf33b6c4 574 Gene3D G3DSA:3.40.50.1220 201 354 3.2E-31 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS15150 9ca13f672a694e17b78063bdaf33b6c4 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 208 345 5.4E-24 T 19-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ALIDE2_RS15150 9ca13f672a694e17b78063bdaf33b6c4 574 Gene3D G3DSA:3.40.50.970 382 559 9.3E-61 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS15150 9ca13f672a694e17b78063bdaf33b6c4 574 SUPERFAMILY SSF52518 22 196 1.57E-50 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 620 7.6E-269 T 19-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 SUPERFAMILY SSF100920 389 541 1.27E-47 T 19-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 622 41.672 T 19-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 PANTHER PTHR19375:SF176 19 620 1.3E-250 T 19-04-2016 ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 Gene3D G3DSA:3.30.420.40 117 207 1.5E-49 T 19-04-2016 ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 Gene3D G3DSA:3.30.420.40 6 48 1.5E-49 T 19-04-2016 ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 Gene3D G3DSA:2.60.34.10 392 533 1.0E-50 T 19-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 PANTHER PTHR19375 19 620 1.3E-250 T 19-04-2016 ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 Gene3D G3DSA:3.30.30.30 62 96 3.3E-6 T 19-04-2016 ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 Gene3D G3DSA:3.30.420.40 208 241 2.3E-31 T 19-04-2016 ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 Gene3D G3DSA:3.30.420.40 319 361 2.3E-31 T 19-04-2016 ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 PRINTS PR00301 70kDa heat shock protein signature 334 350 6.7E-58 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 PRINTS PR00301 70kDa heat shock protein signature 213 223 6.7E-58 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 PRINTS PR00301 70kDa heat shock protein signature 471 487 6.7E-58 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 PRINTS PR00301 70kDa heat shock protein signature 48 60 6.7E-58 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 PRINTS PR00301 70kDa heat shock protein signature 20 33 6.7E-58 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 PRINTS PR00301 70kDa heat shock protein signature 390 409 6.7E-58 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 PRINTS PR00301 70kDa heat shock protein signature 365 385 6.7E-58 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 PRINTS PR00301 70kDa heat shock protein signature 154 174 6.7E-58 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 Gene3D G3DSA:1.20.1270.10 534 620 7.4E-30 T 19-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 207 220 - T 19-04-2016 IPR018181 Heat shock protein 70, conserved site ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 SUPERFAMILY SSF53067 202 381 2.25E-48 T 19-04-2016 ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 SUPERFAMILY SSF53067 19 198 1.55E-49 T 19-04-2016 ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 19-04-2016 IPR018181 Heat shock protein 70, conserved site ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 Pfam PF00012 Hsp70 protein 21 605 8.1E-176 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 SUPERFAMILY SSF100934 509 620 3.92E-34 T 19-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain ALIDE2_RS11965 2fcc03efbce78429f0cbe6cbd05d79c8 622 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 19-04-2016 IPR018181 Heat shock protein 70, conserved site ALIDE2_RS15335 3550056cf09dcd89967cb8d309ce2a7e 339 Gene3D G3DSA:3.40.190.10 32 176 9.4E-49 T 19-04-2016 ALIDE2_RS15335 3550056cf09dcd89967cb8d309ce2a7e 339 Gene3D G3DSA:3.40.190.10 185 304 2.0E-26 T 19-04-2016 ALIDE2_RS15335 3550056cf09dcd89967cb8d309ce2a7e 339 SUPERFAMILY SSF53850 32 337 2.32E-86 T 19-04-2016 ALIDE2_RS15335 3550056cf09dcd89967cb8d309ce2a7e 339 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 155 163 - T 19-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 ALIDE2_RS15335 3550056cf09dcd89967cb8d309ce2a7e 339 Pfam PF13531 Bacterial extracellular solute-binding protein 51 289 1.2E-46 T 19-04-2016 ALIDE2_RS15335 3550056cf09dcd89967cb8d309ce2a7e 339 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 28 335 3.0E-141 T 19-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 ALIDE2_RS15335 3550056cf09dcd89967cb8d309ce2a7e 339 PANTHER PTHR30368 29 339 1.2E-175 T 19-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 ALIDE2_RS15335 3550056cf09dcd89967cb8d309ce2a7e 339 PANTHER PTHR30368:SF2 29 339 1.2E-175 T 19-04-2016 ALIDE2_RS01620 b80530b2581749a5f6c419c8c99331c8 560 Pfam PF00732 GMC oxidoreductase 6 317 3.3E-76 T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS01620 b80530b2581749a5f6c419c8c99331c8 560 Pfam PF05199 GMC oxidoreductase 409 552 1.4E-31 T 19-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 ALIDE2_RS01620 b80530b2581749a5f6c419c8c99331c8 560 Gene3D G3DSA:3.50.50.60 203 335 1.6E-112 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS01620 b80530b2581749a5f6c419c8c99331c8 560 Gene3D G3DSA:3.50.50.60 488 558 1.6E-112 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS01620 b80530b2581749a5f6c419c8c99331c8 560 Gene3D G3DSA:3.50.50.60 2 128 1.6E-112 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS01620 b80530b2581749a5f6c419c8c99331c8 560 SUPERFAMILY SSF54373 312 495 2.16E-62 T 19-04-2016 ALIDE2_RS01620 b80530b2581749a5f6c419c8c99331c8 560 PANTHER PTHR11552 3 558 6.6E-198 T 19-04-2016 ALIDE2_RS01620 b80530b2581749a5f6c419c8c99331c8 560 PANTHER PTHR11552:SF51 3 558 6.6E-198 T 19-04-2016 ALIDE2_RS01620 b80530b2581749a5f6c419c8c99331c8 560 SUPERFAMILY SSF51905 1 310 3.45E-77 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS01620 b80530b2581749a5f6c419c8c99331c8 560 SUPERFAMILY SSF51905 494 558 3.45E-77 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS01620 b80530b2581749a5f6c419c8c99331c8 560 PIRSF PIRSF000137 1 560 2.7E-140 T 19-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 ALIDE2_RS01620 b80530b2581749a5f6c419c8c99331c8 560 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 276 290 - T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS15095 dcec904da1ad2bfa90690266121ade20 153 PANTHER PTHR12714 43 153 1.6E-24 T 19-04-2016 ALIDE2_RS15095 dcec904da1ad2bfa90690266121ade20 153 PANTHER PTHR12714:SF7 43 153 1.6E-24 T 19-04-2016 ALIDE2_RS15095 dcec904da1ad2bfa90690266121ade20 153 Pfam PF04191 Phospholipid methyltransferase 39 140 2.6E-14 T 19-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 ALIDE2_RS15095 dcec904da1ad2bfa90690266121ade20 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 107 152 2.0E-8 T 19-04-2016 ALIDE2_RS16805 1095cbf40a64de91bcd66848c53ee7af 274 Pfam PF13276 HTH-like domain 27 83 5.7E-11 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS16805 1095cbf40a64de91bcd66848c53ee7af 274 PANTHER PTHR32552 1 266 1.2E-67 T 19-04-2016 ALIDE2_RS16805 1095cbf40a64de91bcd66848c53ee7af 274 Gene3D G3DSA:3.30.420.10 101 260 3.9E-38 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS16805 1095cbf40a64de91bcd66848c53ee7af 274 SUPERFAMILY SSF53098 100 268 6.83E-44 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS16805 1095cbf40a64de91bcd66848c53ee7af 274 Pfam PF00665 Integrase core domain 107 221 6.6E-34 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS13310 5eb73b60904d67af341a9410557dc666 724 Hamap MF_00347 Polyphosphate kinase [ppk]. 36 712 29.835 T 19-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ALIDE2_RS13310 5eb73b60904d67af341a9410557dc666 724 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 40 706 1.4E-256 T 19-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ALIDE2_RS13310 5eb73b60904d67af341a9410557dc666 724 PANTHER PTHR30218:SF0 2 710 1.4E-269 T 19-04-2016 ALIDE2_RS13310 5eb73b60904d67af341a9410557dc666 724 PIRSF PIRSF015589 18 719 3.9E-234 T 19-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ALIDE2_RS13310 5eb73b60904d67af341a9410557dc666 724 Pfam PF02503 Polyphosphate kinase middle domain 150 351 3.3E-57 T 19-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 ALIDE2_RS13310 5eb73b60904d67af341a9410557dc666 724 Pfam PF13090 Polyphosphate kinase C-terminal domain 360 705 1.3E-138 T 19-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 ALIDE2_RS13310 5eb73b60904d67af341a9410557dc666 724 Pfam PF13089 Polyphosphate kinase N-terminal domain 41 141 6.6E-26 T 19-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 ALIDE2_RS13310 5eb73b60904d67af341a9410557dc666 724 Gene3D G3DSA:3.30.1840.10 137 329 2.2E-62 T 19-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 ALIDE2_RS13310 5eb73b60904d67af341a9410557dc666 724 Gene3D G3DSA:3.30.870.10 344 529 2.3E-71 T 19-04-2016 ALIDE2_RS13310 5eb73b60904d67af341a9410557dc666 724 PANTHER PTHR30218 2 710 1.4E-269 T 19-04-2016 ALIDE2_RS13310 5eb73b60904d67af341a9410557dc666 724 SUPERFAMILY SSF56024 344 524 3.45E-55 T 19-04-2016 ALIDE2_RS13310 5eb73b60904d67af341a9410557dc666 724 SUPERFAMILY SSF56024 530 707 1.26E-58 T 19-04-2016 ALIDE2_RS13310 5eb73b60904d67af341a9410557dc666 724 SUPERFAMILY SSF140356 40 136 2.49E-26 T 19-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 ALIDE2_RS13310 5eb73b60904d67af341a9410557dc666 724 Gene3D G3DSA:3.30.870.10 530 709 2.6E-59 T 19-04-2016 ALIDE2_RS13310 5eb73b60904d67af341a9410557dc666 724 SUPERFAMILY SSF143724 138 342 4.12E-59 T 19-04-2016 ALIDE2_RS21060 5bfef27256c0ca7d56b22e162e0ef476 375 SUPERFAMILY SSF51735 1 270 6.08E-31 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21060 5bfef27256c0ca7d56b22e162e0ef476 375 SUPERFAMILY SSF51735 304 358 6.08E-31 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21060 5bfef27256c0ca7d56b22e162e0ef476 375 Gene3D G3DSA:3.40.50.720 1 256 7.2E-22 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21060 5bfef27256c0ca7d56b22e162e0ef476 375 PANTHER PTHR32487 2 365 5.7E-77 T 19-04-2016 ALIDE2_RS21060 5bfef27256c0ca7d56b22e162e0ef476 375 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 242 3.1E-6 T 19-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 ALIDE2_RS21060 5bfef27256c0ca7d56b22e162e0ef476 375 PANTHER PTHR32487:SF0 2 365 5.7E-77 T 19-04-2016 ALIDE2_RS09275 10a34b3a6d84a97ed5d990240c70736e 317 PANTHER PTHR30349 1 287 5.7E-73 T 19-04-2016 ALIDE2_RS09275 10a34b3a6d84a97ed5d990240c70736e 317 PIRSF PIRSF017082 1 317 1.2E-67 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS09275 10a34b3a6d84a97ed5d990240c70736e 317 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 43 313 1.3E-82 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS09275 10a34b3a6d84a97ed5d990240c70736e 317 Gene3D G3DSA:3.40.190.10 124 233 4.2E-4 T 19-04-2016 ALIDE2_RS09275 10a34b3a6d84a97ed5d990240c70736e 317 PANTHER PTHR30349:SF32 1 287 5.7E-73 T 19-04-2016 ALIDE2_RS09275 10a34b3a6d84a97ed5d990240c70736e 317 SUPERFAMILY SSF53850 108 278 3.26E-11 T 19-04-2016 ALIDE2_RS00275 868b7e18afbac43dd16714ecd49ce76c 192 Gene3D G3DSA:3.40.50.360 1 190 2.3E-63 T 19-04-2016 IPR029039 Flavoprotein-like domain ALIDE2_RS00275 868b7e18afbac43dd16714ecd49ce76c 192 PANTHER PTHR30543 1 190 7.6E-44 T 19-04-2016 ALIDE2_RS00275 868b7e18afbac43dd16714ecd49ce76c 192 PANTHER PTHR30543:SF6 1 190 7.6E-44 T 19-04-2016 ALIDE2_RS00275 868b7e18afbac43dd16714ecd49ce76c 192 Pfam PF03358 NADPH-dependent FMN reductase 1 155 6.1E-41 T 19-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ALIDE2_RS00275 868b7e18afbac43dd16714ecd49ce76c 192 SUPERFAMILY SSF52218 1 187 6.39E-46 T 19-04-2016 IPR029039 Flavoprotein-like domain ALIDE2_RS02895 1adf32b731caf87343756f6b8becad9e 308 SMART SM00849 21 206 1.8E-22 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS02895 1adf32b731caf87343756f6b8becad9e 308 SUPERFAMILY SSF56281 17 227 5.5E-40 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS02895 1adf32b731caf87343756f6b8becad9e 308 Gene3D G3DSA:3.60.15.10 15 226 9.1E-40 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS02895 1adf32b731caf87343756f6b8becad9e 308 Pfam PF00753 Metallo-beta-lactamase superfamily 17 206 1.1E-20 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS02895 1adf32b731caf87343756f6b8becad9e 308 PANTHER PTHR11935 15 217 4.9E-18 T 19-04-2016 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 371 550 1.2E-68 T 19-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 Pfam PF02096 60Kd inner membrane protein 372 550 9.6E-60 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 Pfam PF14849 YidC periplasmic domain 87 361 3.7E-81 T 19-04-2016 IPR028053 Membrane insertase YidC, N-terminal ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 PRINTS PR00701 60kDa inner membrane protein signature 480 502 9.6E-71 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 PRINTS PR00701 60kDa inner membrane protein signature 433 456 9.6E-71 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 PRINTS PR00701 60kDa inner membrane protein signature 93 114 9.6E-71 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 PRINTS PR00701 60kDa inner membrane protein signature 3 24 9.6E-71 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 PRINTS PR00701 60kDa inner membrane protein signature 342 362 9.6E-71 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 PRINTS PR00701 60kDa inner membrane protein signature 180 200 9.6E-71 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 PRINTS PR00701 60kDa inner membrane protein signature 234 252 9.6E-71 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 PRINTS PR00701 60kDa inner membrane protein signature 516 539 9.6E-71 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 PRINTS PR00701 60kDa inner membrane protein signature 269 284 9.6E-71 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 369 9.5E-110 T 19-04-2016 IPR028053 Membrane insertase YidC, N-terminal ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 552 23.333 T 19-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 PANTHER PTHR12428 187 550 1.7E-97 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 PANTHER PTHR12428:SF14 187 550 1.7E-97 T 19-04-2016 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 PRINTS PR01900 YidC translocation/secretion protein signature 505 529 7.4E-20 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 PRINTS PR01900 YidC translocation/secretion protein signature 486 501 7.4E-20 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ALIDE2_RS23530 8bd3278f7948dc4969c39c306c62faf5 564 PRINTS PR01900 YidC translocation/secretion protein signature 357 373 7.4E-20 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ALIDE2_RS06070 ea3c4db4d54ab35460654127ed28c7ca 240 Pfam PF01814 Hemerythrin HHE cation binding domain 85 223 3.4E-25 T 19-04-2016 IPR012312 Haemerythrin-like ALIDE2_RS06070 ea3c4db4d54ab35460654127ed28c7ca 240 PANTHER PTHR36438:SF1 9 236 7.8E-77 T 19-04-2016 ALIDE2_RS06070 ea3c4db4d54ab35460654127ed28c7ca 240 Gene3D G3DSA:1.20.120.520 86 226 2.2E-26 T 19-04-2016 ALIDE2_RS06070 ea3c4db4d54ab35460654127ed28c7ca 240 PANTHER PTHR36438 9 236 7.8E-77 T 19-04-2016 ALIDE2_RS06070 ea3c4db4d54ab35460654127ed28c7ca 240 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 18 223 2.2E-72 T 19-04-2016 IPR019903 Repair of iron centres family ALIDE2_RS06070 ea3c4db4d54ab35460654127ed28c7ca 240 Pfam PF04405 Domain of Unknown function (DUF542) 16 69 1.2E-22 T 19-04-2016 IPR019903 Repair of iron centres family ALIDE2_RS03750 9259287f362879166d993b39b982cc5a 229 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 28 2.2E-6 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03750 9259287f362879166d993b39b982cc5a 229 SUPERFAMILY SSF54523 44 214 7.85E-5 T 19-04-2016 ALIDE2_RS03750 9259287f362879166d993b39b982cc5a 229 Pfam PF13633 Prokaryotic N-terminal methylation site 9 33 6.3E-8 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03750 9259287f362879166d993b39b982cc5a 229 SUPERFAMILY SSF54523 11 79 6.83E-8 T 19-04-2016 ALIDE2_RS03750 9259287f362879166d993b39b982cc5a 229 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS23165 6fd4dfca545a6fbe09949367771ef281 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 1.1E-28 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS23165 6fd4dfca545a6fbe09949367771ef281 384 Gene3D G3DSA:1.20.140.10 217 380 9.8E-59 T 19-04-2016 ALIDE2_RS23165 6fd4dfca545a6fbe09949367771ef281 384 SUPERFAMILY SSF47203 229 379 5.8E-50 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS23165 6fd4dfca545a6fbe09949367771ef281 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 1.4E-47 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS23165 6fd4dfca545a6fbe09949367771ef281 384 SUPERFAMILY SSF56645 11 241 3.53E-77 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS23165 6fd4dfca545a6fbe09949367771ef281 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS23165 6fd4dfca545a6fbe09949367771ef281 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS23165 6fd4dfca545a6fbe09949367771ef281 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 117 3.4E-26 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS23165 6fd4dfca545a6fbe09949367771ef281 384 PANTHER PTHR10909 11 377 3.0E-135 T 19-04-2016 ALIDE2_RS23165 6fd4dfca545a6fbe09949367771ef281 384 Gene3D G3DSA:2.40.110.10 120 216 7.3E-41 T 19-04-2016 ALIDE2_RS23165 6fd4dfca545a6fbe09949367771ef281 384 Gene3D G3DSA:1.10.540.10 11 118 4.9E-29 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 Gene3D G3DSA:1.10.2060.10 141 256 9.3E-52 T 19-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 Gene3D G3DSA:1.20.5.550 86 137 1.3E-18 T 19-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 Gene3D G3DSA:3.20.20.220 258 609 2.2E-114 T 19-04-2016 IPR029041 FAD-linked oxidoreductase-like ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 SUPERFAMILY SSF81935 87 257 8.5E-61 T 19-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 Gene3D G3DSA:3.40.309.10 905 1094 1.8E-44 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 Pfam PF00171 Aldehyde dehydrogenase family 672 1111 3.4E-119 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 SUPERFAMILY SSF47598 2 44 1.45E-8 T 19-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 144 255 9.6E-46 T 19-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 SUPERFAMILY SSF53720 664 1113 1.7E-127 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 SUPERFAMILY SSF51730 258 612 2.39E-117 T 19-04-2016 IPR029041 FAD-linked oxidoreductase-like ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 PIRSF PIRSF000197 73 1331 0.0 T 19-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 PANTHER PTHR11699:SF18 672 1113 8.5E-171 T 19-04-2016 ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 Gene3D G3DSA:3.40.605.10 670 904 2.7E-67 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 616 1113 1.4E-218 T 19-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 Pfam PF01619 Proline dehydrogenase 267 568 5.6E-101 T 19-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 PANTHER PTHR11699 672 1113 8.5E-171 T 19-04-2016 ALIDE2_RS15460 2768eea79bbbdaf8b5aa53b081c5365b 1331 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 917 928 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS04495 4e112cff024cbe22c9ba8c046f26c3b3 437 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 428 26.724 T 19-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 ALIDE2_RS04495 4e112cff024cbe22c9ba8c046f26c3b3 437 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 177 311 3.2E-44 T 19-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ALIDE2_RS04495 4e112cff024cbe22c9ba8c046f26c3b3 437 SUPERFAMILY SSF69742 1 163 9.42E-40 T 19-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 ALIDE2_RS04495 4e112cff024cbe22c9ba8c046f26c3b3 437 PANTHER PTHR21089 277 372 9.3E-99 T 19-04-2016 ALIDE2_RS04495 4e112cff024cbe22c9ba8c046f26c3b3 437 PANTHER PTHR21089 48 261 9.3E-99 T 19-04-2016 ALIDE2_RS04495 4e112cff024cbe22c9ba8c046f26c3b3 437 PIRSF PIRSF000445 1 436 7.9E-134 T 19-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 ALIDE2_RS04495 4e112cff024cbe22c9ba8c046f26c3b3 437 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 161 1.7E-42 T 19-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 ALIDE2_RS04495 4e112cff024cbe22c9ba8c046f26c3b3 437 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 104 127 - T 19-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 ALIDE2_RS04495 4e112cff024cbe22c9ba8c046f26c3b3 437 SUPERFAMILY SSF51735 168 319 3.54E-34 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04495 4e112cff024cbe22c9ba8c046f26c3b3 437 PANTHER PTHR21089:SF3 277 372 9.3E-99 T 19-04-2016 ALIDE2_RS04495 4e112cff024cbe22c9ba8c046f26c3b3 437 PANTHER PTHR21089:SF3 48 261 9.3E-99 T 19-04-2016 ALIDE2_RS04495 4e112cff024cbe22c9ba8c046f26c3b3 437 Gene3D G3DSA:3.40.50.720 168 316 2.9E-34 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04495 4e112cff024cbe22c9ba8c046f26c3b3 437 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 325 428 2.5E-26 T 19-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 ALIDE2_RS04495 4e112cff024cbe22c9ba8c046f26c3b3 437 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 5 427 1.3E-107 T 19-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 ALIDE2_RS04495 4e112cff024cbe22c9ba8c046f26c3b3 437 SUPERFAMILY SSF69075 322 428 3.27E-17 T 19-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 ALIDE2_RS00910 2e752a85fb40d13906225f4990d8ecd7 604 PANTHER PTHR13943 42 116 3.1E-145 T 19-04-2016 ALIDE2_RS00910 2e752a85fb40d13906225f4990d8ecd7 604 PANTHER PTHR13943 139 579 3.1E-145 T 19-04-2016 ALIDE2_RS00910 2e752a85fb40d13906225f4990d8ecd7 604 PANTHER PTHR13943:SF48 42 116 3.1E-145 T 19-04-2016 ALIDE2_RS00910 2e752a85fb40d13906225f4990d8ecd7 604 PANTHER PTHR13943:SF48 139 579 3.1E-145 T 19-04-2016 ALIDE2_RS00910 2e752a85fb40d13906225f4990d8ecd7 604 Pfam PF07287 Protein of unknown function (DUF1446) 8 351 6.7E-115 T 19-04-2016 IPR010839 Protein of unknown function DUF1446 ALIDE2_RS15100 878ec8820165777b664fafaddf9dd88a 607 Gene3D G3DSA:3.10.105.10 334 568 3.3E-36 T 19-04-2016 ALIDE2_RS15100 878ec8820165777b664fafaddf9dd88a 607 PANTHER PTHR30290:SF2 1 363 9.2E-136 T 19-04-2016 ALIDE2_RS15100 878ec8820165777b664fafaddf9dd88a 607 PANTHER PTHR30290:SF2 390 603 9.2E-136 T 19-04-2016 ALIDE2_RS15100 878ec8820165777b664fafaddf9dd88a 607 PANTHER PTHR30290 1 363 9.2E-136 T 19-04-2016 ALIDE2_RS15100 878ec8820165777b664fafaddf9dd88a 607 PANTHER PTHR30290 390 603 9.2E-136 T 19-04-2016 ALIDE2_RS15100 878ec8820165777b664fafaddf9dd88a 607 PIRSF PIRSF002741 3 604 2.4E-92 T 19-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ALIDE2_RS15100 878ec8820165777b664fafaddf9dd88a 607 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 103 515 2.9E-75 T 19-04-2016 IPR000914 Solute-binding protein family 5 domain ALIDE2_RS15100 878ec8820165777b664fafaddf9dd88a 607 Gene3D G3DSA:3.90.76.10 67 220 2.3E-26 T 19-04-2016 ALIDE2_RS15100 878ec8820165777b664fafaddf9dd88a 607 SUPERFAMILY SSF53850 50 598 8.14E-112 T 19-04-2016 ALIDE2_RS15100 878ec8820165777b664fafaddf9dd88a 607 Gene3D G3DSA:3.40.190.10 221 333 2.1E-26 T 19-04-2016 ALIDE2_RS08475 ecd8b5d68463040c596ffe42aec081c3 492 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 22 440 1.8E-53 T 19-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 ALIDE2_RS08475 ecd8b5d68463040c596ffe42aec081c3 492 PANTHER PTHR31806 9 465 1.2E-108 T 19-04-2016 ALIDE2_RS08475 ecd8b5d68463040c596ffe42aec081c3 492 PIRSF PIRSF002744 1 462 3.5E-112 T 19-04-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 Gene3D G3DSA:3.50.50.60 363 422 3.5E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 Gene3D G3DSA:3.50.50.60 190 273 3.5E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 Gene3D G3DSA:3.50.50.60 2 55 3.5E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 Gene3D G3DSA:3.50.50.60 108 122 3.5E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 PANTHER PTHR13847 1 63 7.7E-211 T 19-04-2016 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 PANTHER PTHR13847 107 419 7.7E-211 T 19-04-2016 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 PANTHER PTHR13847:SF148 1 63 7.7E-211 T 19-04-2016 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 Pfam PF01266 FAD dependent oxidoreductase 2 401 2.7E-69 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 SUPERFAMILY SSF54373 274 363 1.28E-16 T 19-04-2016 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 SUPERFAMILY SSF51905 107 274 4.92E-53 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 SUPERFAMILY SSF51905 363 420 4.92E-53 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 SUPERFAMILY SSF51905 2 54 4.92E-53 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 414 48.44 T 19-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 PANTHER PTHR13847:SF148 107 419 7.7E-211 T 19-04-2016 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 Gene3D G3DSA:3.30.9.10 134 189 5.0E-12 T 19-04-2016 ALIDE2_RS22645 56fabe480fc7f16fbbd9ff194528461c 436 Gene3D G3DSA:3.30.9.10 274 362 5.0E-12 T 19-04-2016 ALIDE2_RS04525 4aee5e07d6068de1aa55ac2e319be58d 249 PANTHER PTHR23344:SF20 9 246 1.8E-60 T 19-04-2016 ALIDE2_RS04525 4aee5e07d6068de1aa55ac2e319be58d 249 SUPERFAMILY SSF51695 10 246 2.62E-63 T 19-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 ALIDE2_RS04525 4aee5e07d6068de1aa55ac2e319be58d 249 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 17 244 8.0E-35 T 19-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ALIDE2_RS04525 4aee5e07d6068de1aa55ac2e319be58d 249 Gene3D G3DSA:3.20.20.190 5 245 5.5E-62 T 19-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 ALIDE2_RS04525 4aee5e07d6068de1aa55ac2e319be58d 249 PANTHER PTHR23344 9 246 1.8E-60 T 19-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 ALIDE2_RS22300 a0663f6255ee2c64c65e18699ecd997b 470 PIRSF PIRSF000204 1 470 1.2E-216 T 19-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 ALIDE2_RS22300 a0663f6255ee2c64c65e18699ecd997b 470 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 465 7.4E-196 T 19-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 ALIDE2_RS22300 a0663f6255ee2c64c65e18699ecd997b 470 PANTHER PTHR10160 4 465 3.4E-247 T 19-04-2016 ALIDE2_RS22300 a0663f6255ee2c64c65e18699ecd997b 470 SUPERFAMILY SSF52467 296 469 6.54E-77 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS22300 a0663f6255ee2c64c65e18699ecd997b 470 Gene3D G3DSA:3.40.50.1220 294 469 3.8E-91 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS15435 7bd7262408eac5c49822493b84994a5a 506 Gene3D G3DSA:1.10.1040.10 190 285 4.5E-25 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS15435 7bd7262408eac5c49822493b84994a5a 506 Gene3D G3DSA:1.10.1040.10 415 495 1.2E-16 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS15435 7bd7262408eac5c49822493b84994a5a 506 SUPERFAMILY SSF51735 6 187 2.45E-48 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS15435 7bd7262408eac5c49822493b84994a5a 506 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 186 2.4E-54 T 19-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS15435 7bd7262408eac5c49822493b84994a5a 506 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 285 6.3E-26 T 19-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS15435 7bd7262408eac5c49822493b84994a5a 506 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 415 493 1.8E-14 T 19-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS15435 7bd7262408eac5c49822493b84994a5a 506 SUPERFAMILY SSF48179 187 294 1.36E-27 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS15435 7bd7262408eac5c49822493b84994a5a 506 SUPERFAMILY SSF48179 415 494 1.02E-15 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS15435 7bd7262408eac5c49822493b84994a5a 506 PANTHER PTHR23309:SF12 8 305 9.2E-194 T 19-04-2016 ALIDE2_RS15435 7bd7262408eac5c49822493b84994a5a 506 PANTHER PTHR23309:SF12 392 501 9.2E-194 T 19-04-2016 ALIDE2_RS15435 7bd7262408eac5c49822493b84994a5a 506 PANTHER PTHR23309 8 305 9.2E-194 T 19-04-2016 ALIDE2_RS15435 7bd7262408eac5c49822493b84994a5a 506 PANTHER PTHR23309 392 501 9.2E-194 T 19-04-2016 ALIDE2_RS15435 7bd7262408eac5c49822493b84994a5a 506 Gene3D G3DSA:3.40.50.720 5 189 5.3E-51 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS09655 bc353f845ddd047ced0040499ab487d0 356 Gene3D G3DSA:3.90.1200.10 108 246 1.1E-10 T 19-04-2016 ALIDE2_RS09655 bc353f845ddd047ced0040499ab487d0 356 Pfam PF01636 Phosphotransferase enzyme family 41 249 3.3E-19 T 19-04-2016 IPR002575 Aminoglycoside phosphotransferase ALIDE2_RS09655 bc353f845ddd047ced0040499ab487d0 356 SUPERFAMILY SSF56112 34 247 2.33E-24 T 19-04-2016 IPR011009 Protein kinase-like domain ALIDE2_RS18750 7f99be929a9d39016e8fc7a9be9c8aeb 176 Pfam PF13489 Methyltransferase domain 3 110 1.4E-8 T 19-04-2016 ALIDE2_RS18750 7f99be929a9d39016e8fc7a9be9c8aeb 176 Gene3D G3DSA:3.40.50.150 5 151 1.9E-19 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS18750 7f99be929a9d39016e8fc7a9be9c8aeb 176 SUPERFAMILY SSF53335 5 150 1.24E-26 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS07825 1788eb6495180e12f1aa378760a170ee 238 Gene3D G3DSA:3.30.420.10 87 230 4.5E-12 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS07825 1788eb6495180e12f1aa378760a170ee 238 Pfam PF00665 Integrase core domain 97 189 6.0E-8 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS07825 1788eb6495180e12f1aa378760a170ee 238 SUPERFAMILY SSF53098 85 230 2.88E-23 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS07825 1788eb6495180e12f1aa378760a170ee 238 PANTHER PTHR10948 8 230 4.8E-50 T 19-04-2016 ALIDE2_RS04920 82f5c6dc8fd30e57deb3cd871b600b99 374 Gene3D G3DSA:1.20.120.140 105 185 4.8E-27 T 19-04-2016 ALIDE2_RS04920 82f5c6dc8fd30e57deb3cd871b600b99 374 Pfam PF02881 SRP54-type protein, helical bundle domain 93 156 4.9E-11 T 19-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 ALIDE2_RS04920 82f5c6dc8fd30e57deb3cd871b600b99 374 PANTHER PTHR11564:SF16 74 374 1.8E-112 T 19-04-2016 ALIDE2_RS04920 82f5c6dc8fd30e57deb3cd871b600b99 374 SMART SM00382 173 330 5.2E-4 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS04920 82f5c6dc8fd30e57deb3cd871b600b99 374 SMART SM00962 174 374 2.2E-107 T 19-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 ALIDE2_RS04920 82f5c6dc8fd30e57deb3cd871b600b99 374 SMART SM00963 84 160 2.8E-16 T 19-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 ALIDE2_RS04920 82f5c6dc8fd30e57deb3cd871b600b99 374 SUPERFAMILY SSF47364 79 154 5.23E-17 T 19-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 ALIDE2_RS04920 82f5c6dc8fd30e57deb3cd871b600b99 374 Gene3D G3DSA:3.40.50.300 186 373 2.5E-78 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04920 82f5c6dc8fd30e57deb3cd871b600b99 374 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 103 374 57.488 T 19-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 ALIDE2_RS04920 82f5c6dc8fd30e57deb3cd871b600b99 374 PANTHER PTHR11564 74 374 1.8E-112 T 19-04-2016 ALIDE2_RS04920 82f5c6dc8fd30e57deb3cd871b600b99 374 Pfam PF00448 SRP54-type protein, GTPase domain 174 373 1.1E-70 T 19-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 ALIDE2_RS04920 82f5c6dc8fd30e57deb3cd871b600b99 374 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 104 373 1.0E-98 T 19-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 ALIDE2_RS04920 82f5c6dc8fd30e57deb3cd871b600b99 374 SUPERFAMILY SSF52540 172 373 3.72E-48 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04920 82f5c6dc8fd30e57deb3cd871b600b99 374 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 347 360 - T 19-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 ALIDE2_RS00895 ea8ab90f4adc8d23d00a597d3f70146f 387 PANTHER PTHR10909:SF227 1 383 7.2E-208 T 19-04-2016 ALIDE2_RS00895 ea8ab90f4adc8d23d00a597d3f70146f 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 221 2.7E-21 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS00895 ea8ab90f4adc8d23d00a597d3f70146f 387 SUPERFAMILY SSF47203 231 380 7.57E-41 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00895 ea8ab90f4adc8d23d00a597d3f70146f 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 118 8.3E-30 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00895 ea8ab90f4adc8d23d00a597d3f70146f 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 380 8.8E-40 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00895 ea8ab90f4adc8d23d00a597d3f70146f 387 Gene3D G3DSA:1.20.140.10 223 380 1.2E-51 T 19-04-2016 ALIDE2_RS00895 ea8ab90f4adc8d23d00a597d3f70146f 387 PANTHER PTHR10909 1 383 7.2E-208 T 19-04-2016 ALIDE2_RS00895 ea8ab90f4adc8d23d00a597d3f70146f 387 Gene3D G3DSA:2.40.110.10 122 222 8.9E-35 T 19-04-2016 ALIDE2_RS00895 ea8ab90f4adc8d23d00a597d3f70146f 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS00895 ea8ab90f4adc8d23d00a597d3f70146f 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS00895 ea8ab90f4adc8d23d00a597d3f70146f 387 Gene3D G3DSA:1.10.540.10 3 119 4.6E-33 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00895 ea8ab90f4adc8d23d00a597d3f70146f 387 SUPERFAMILY SSF56645 2 245 1.31E-73 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS11910 0ecd3039a8879d2b35efcb08c63c79da 447 Gene3D G3DSA:3.40.50.1100 162 429 6.8E-32 T 19-04-2016 ALIDE2_RS11910 0ecd3039a8879d2b35efcb08c63c79da 447 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 447 195.783 T 19-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 ALIDE2_RS11910 0ecd3039a8879d2b35efcb08c63c79da 447 SUPERFAMILY SSF53686 72 432 5.62E-48 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS11910 0ecd3039a8879d2b35efcb08c63c79da 447 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 75 394 9.7E-42 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS11910 0ecd3039a8879d2b35efcb08c63c79da 447 PANTHER PTHR10314:SF9 47 128 7.3E-121 T 19-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 ALIDE2_RS11910 0ecd3039a8879d2b35efcb08c63c79da 447 PANTHER PTHR10314:SF9 155 443 7.3E-121 T 19-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 ALIDE2_RS11910 0ecd3039a8879d2b35efcb08c63c79da 447 PANTHER PTHR10314 47 128 7.3E-121 T 19-04-2016 ALIDE2_RS11910 0ecd3039a8879d2b35efcb08c63c79da 447 PANTHER PTHR10314 155 443 7.3E-121 T 19-04-2016 ALIDE2_RS11910 0ecd3039a8879d2b35efcb08c63c79da 447 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 10 439 2.8E-140 T 19-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 ALIDE2_RS19245 8e1a3b508ad366534d2ad3209d619c1d 434 Pfam PF00202 Aminotransferase class-III 36 401 6.5E-73 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ALIDE2_RS19245 8e1a3b508ad366534d2ad3209d619c1d 434 PANTHER PTHR11986 5 434 2.3E-192 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ALIDE2_RS19245 8e1a3b508ad366534d2ad3209d619c1d 434 Gene3D G3DSA:3.90.1150.10 3 73 3.1E-38 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS19245 8e1a3b508ad366534d2ad3209d619c1d 434 Gene3D G3DSA:3.90.1150.10 328 432 3.1E-38 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS19245 8e1a3b508ad366534d2ad3209d619c1d 434 PANTHER PTHR11986:SF5 5 434 2.3E-192 T 19-04-2016 ALIDE2_RS19245 8e1a3b508ad366534d2ad3209d619c1d 434 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 7 434 98.385 T 19-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 ALIDE2_RS19245 8e1a3b508ad366534d2ad3209d619c1d 434 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 8 432 1.2E-171 T 19-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 ALIDE2_RS19245 8e1a3b508ad366534d2ad3209d619c1d 434 Gene3D G3DSA:3.40.640.10 74 324 1.2E-73 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS19245 8e1a3b508ad366534d2ad3209d619c1d 434 SUPERFAMILY SSF53383 5 433 3.38E-122 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS04755 75e4fcfc7d452617d7d72018c14e6b4f 287 Pfam PF03668 P-loop ATPase protein family 3 285 2.7E-93 T 19-04-2016 IPR005337 RapZ-like family GO:0005524 ALIDE2_RS04755 75e4fcfc7d452617d7d72018c14e6b4f 287 PIRSF PIRSF005052 3 286 1.1E-104 T 19-04-2016 IPR005337 RapZ-like family GO:0005524 ALIDE2_RS04755 75e4fcfc7d452617d7d72018c14e6b4f 287 PANTHER PTHR30448:SF0 1 285 2.4E-119 T 19-04-2016 ALIDE2_RS04755 75e4fcfc7d452617d7d72018c14e6b4f 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 3 286 39.283 T 19-04-2016 IPR005337 RapZ-like family GO:0005524 ALIDE2_RS04755 75e4fcfc7d452617d7d72018c14e6b4f 287 SUPERFAMILY SSF52540 4 159 1.05E-11 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04755 75e4fcfc7d452617d7d72018c14e6b4f 287 PANTHER PTHR30448 1 285 2.4E-119 T 19-04-2016 ALIDE2_RS04755 75e4fcfc7d452617d7d72018c14e6b4f 287 Gene3D G3DSA:3.40.50.300 5 160 1.4E-16 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00530 ddb2667bd4914ff6ac3a43c493e2143e 399 Pfam PF13291 ACT domain 324 392 3.3E-9 T 19-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 ALIDE2_RS00530 ddb2667bd4914ff6ac3a43c493e2143e 399 SUPERFAMILY SSF55021 325 391 2.2E-8 T 19-04-2016 ALIDE2_RS00530 ddb2667bd4914ff6ac3a43c493e2143e 399 SUPERFAMILY SSF53686 4 310 7.73E-92 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS00530 ddb2667bd4914ff6ac3a43c493e2143e 399 Gene3D G3DSA:3.40.50.1100 69 319 1.7E-70 T 19-04-2016 ALIDE2_RS00530 ddb2667bd4914ff6ac3a43c493e2143e 399 PANTHER PTHR10314 1 353 5.6E-143 T 19-04-2016 ALIDE2_RS00530 ddb2667bd4914ff6ac3a43c493e2143e 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 301 2.8E-73 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS00530 ddb2667bd4914ff6ac3a43c493e2143e 399 Gene3D G3DSA:3.30.70.260 321 390 4.7E-11 T 19-04-2016 ALIDE2_RS00530 ddb2667bd4914ff6ac3a43c493e2143e 399 PANTHER PTHR10314:SF17 1 353 5.6E-143 T 19-04-2016 ALIDE2_RS00530 ddb2667bd4914ff6ac3a43c493e2143e 399 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 392 9.4E-130 T 19-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 ALIDE2_RS19305 975a4a98614d7bfd9cc993b00f513167 246 SUPERFAMILY SSF69593 47 192 4.84E-29 T 19-04-2016 ALIDE2_RS19305 975a4a98614d7bfd9cc993b00f513167 246 PANTHER PTHR10434 1 178 2.4E-36 T 19-04-2016 ALIDE2_RS19305 975a4a98614d7bfd9cc993b00f513167 246 Gene3D G3DSA:3.40.1130.10 63 177 2.6E-10 T 19-04-2016 ALIDE2_RS19305 975a4a98614d7bfd9cc993b00f513167 246 Pfam PF01553 Acyltransferase 63 177 4.0E-23 T 19-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ALIDE2_RS19305 975a4a98614d7bfd9cc993b00f513167 246 SMART SM00563 68 180 3.8E-32 T 19-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ALIDE2_RS19305 975a4a98614d7bfd9cc993b00f513167 246 PANTHER PTHR10434:SF8 1 178 2.4E-36 T 19-04-2016 ALIDE2_RS06770 a89ded7acfe246ef1324e4eb8baf8c7e 116 ProSitePatterns PS00769 Transthyretin signature 2. 99 111 - T 19-04-2016 IPR023419 Transthyretin, conserved site ALIDE2_RS06770 a89ded7acfe246ef1324e4eb8baf8c7e 116 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 3 116 4.3E-38 T 19-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 ALIDE2_RS06770 a89ded7acfe246ef1324e4eb8baf8c7e 116 PANTHER PTHR10395 3 116 9.0E-41 T 19-04-2016 ALIDE2_RS06770 a89ded7acfe246ef1324e4eb8baf8c7e 116 SUPERFAMILY SSF49472 3 116 2.75E-39 T 19-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily ALIDE2_RS06770 a89ded7acfe246ef1324e4eb8baf8c7e 116 ProSitePatterns PS00768 Transthyretin signature 1. 6 21 - T 19-04-2016 IPR023418 Transthyretin, thyroxine binding site ALIDE2_RS06770 a89ded7acfe246ef1324e4eb8baf8c7e 116 Gene3D G3DSA:2.60.40.180 3 116 1.7E-36 T 19-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily ALIDE2_RS06770 a89ded7acfe246ef1324e4eb8baf8c7e 116 PANTHER PTHR10395:SF7 3 116 9.0E-41 T 19-04-2016 ALIDE2_RS06770 a89ded7acfe246ef1324e4eb8baf8c7e 116 PRINTS PR00189 Transthyretin signature 2 22 6.4E-8 T 19-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase ALIDE2_RS06770 a89ded7acfe246ef1324e4eb8baf8c7e 116 PRINTS PR00189 Transthyretin signature 94 116 6.4E-8 T 19-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase ALIDE2_RS06770 a89ded7acfe246ef1324e4eb8baf8c7e 116 Pfam PF00576 HIUase/Transthyretin family 3 115 1.2E-34 T 19-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily ALIDE2_RS04235 91846b63a32c8769aa99b8900c3c8a6e 118 PANTHER PTHR23089:SF2 4 111 3.4E-42 T 19-04-2016 ALIDE2_RS04235 91846b63a32c8769aa99b8900c3c8a6e 118 Pfam PF11969 Scavenger mRNA decapping enzyme C-term binding 5 110 1.2E-22 T 19-04-2016 ALIDE2_RS04235 91846b63a32c8769aa99b8900c3c8a6e 118 PRINTS PR00332 Histidine triad family signature 28 46 1.8E-18 T 19-04-2016 IPR001310 Histidine triad (HIT) protein ALIDE2_RS04235 91846b63a32c8769aa99b8900c3c8a6e 118 PRINTS PR00332 Histidine triad family signature 99 109 1.8E-18 T 19-04-2016 IPR001310 Histidine triad (HIT) protein ALIDE2_RS04235 91846b63a32c8769aa99b8900c3c8a6e 118 PRINTS PR00332 Histidine triad family signature 7 23 1.8E-18 T 19-04-2016 IPR001310 Histidine triad (HIT) protein ALIDE2_RS04235 91846b63a32c8769aa99b8900c3c8a6e 118 ProSitePatterns PS00892 HIT domain signature. 92 110 - T 19-04-2016 IPR019808 Histidine triad, conserved site ALIDE2_RS04235 91846b63a32c8769aa99b8900c3c8a6e 118 PANTHER PTHR23089 4 111 3.4E-42 T 19-04-2016 IPR001310 Histidine triad (HIT) protein ALIDE2_RS04235 91846b63a32c8769aa99b8900c3c8a6e 118 SUPERFAMILY SSF54197 3 113 1.55E-36 T 19-04-2016 IPR011146 HIT-like domain GO:0003824 ALIDE2_RS04235 91846b63a32c8769aa99b8900c3c8a6e 118 Gene3D G3DSA:3.30.428.10 2 113 3.2E-37 T 19-04-2016 IPR011146 HIT-like domain GO:0003824 ALIDE2_RS21130 068aff9a4902e59fec58cfce8312891b 395 PANTHER PTHR18919:SF95 1 395 7.8E-188 T 19-04-2016 ALIDE2_RS21130 068aff9a4902e59fec58cfce8312891b 395 PANTHER PTHR18919 1 395 7.8E-188 T 19-04-2016 ALIDE2_RS21130 068aff9a4902e59fec58cfce8312891b 395 PIRSF PIRSF000429 1 395 1.2E-130 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS21130 068aff9a4902e59fec58cfce8312891b 395 Pfam PF00108 Thiolase, N-terminal domain 6 263 3.6E-91 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS21130 068aff9a4902e59fec58cfce8312891b 395 Gene3D G3DSA:3.40.47.10 5 126 4.4E-70 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS21130 068aff9a4902e59fec58cfce8312891b 395 Gene3D G3DSA:3.40.47.10 196 277 4.4E-70 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS21130 068aff9a4902e59fec58cfce8312891b 395 Gene3D G3DSA:3.40.47.10 149 195 3.1E-63 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS21130 068aff9a4902e59fec58cfce8312891b 395 Gene3D G3DSA:3.40.47.10 279 394 3.1E-63 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS21130 068aff9a4902e59fec58cfce8312891b 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 393 1.9E-139 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS21130 068aff9a4902e59fec58cfce8312891b 395 Pfam PF02803 Thiolase, C-terminal domain 272 394 1.4E-44 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS21130 068aff9a4902e59fec58cfce8312891b 395 SUPERFAMILY SSF53901 273 394 7.4E-44 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS21130 068aff9a4902e59fec58cfce8312891b 395 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 19-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 ALIDE2_RS21130 068aff9a4902e59fec58cfce8312891b 395 ProSitePatterns PS00099 Thiolases active site. 376 389 - T 19-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 ALIDE2_RS21130 068aff9a4902e59fec58cfce8312891b 395 SUPERFAMILY SSF53901 5 272 1.85E-83 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS18500 b94dfe5613be8a3c1cf60a08f6507e03 300 SUPERFAMILY SSF103481 42 145 4.45E-16 T 19-04-2016 ALIDE2_RS18500 b94dfe5613be8a3c1cf60a08f6507e03 300 PANTHER PTHR12715:SF12 10 300 5.7E-52 T 19-04-2016 ALIDE2_RS18500 b94dfe5613be8a3c1cf60a08f6507e03 300 PANTHER PTHR12715 10 300 5.7E-52 T 19-04-2016 ALIDE2_RS18500 b94dfe5613be8a3c1cf60a08f6507e03 300 SUPERFAMILY SSF103481 217 298 1.83E-8 T 19-04-2016 ALIDE2_RS18500 b94dfe5613be8a3c1cf60a08f6507e03 300 Pfam PF00892 EamA-like transporter family 10 141 6.4E-22 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS18500 b94dfe5613be8a3c1cf60a08f6507e03 300 Pfam PF00892 EamA-like transporter family 156 297 3.4E-13 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS00315 377d12091e2eee8045572e22d72a31ca 259 Gene3D G3DSA:3.40.50.150 110 203 4.1E-8 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS00315 377d12091e2eee8045572e22d72a31ca 259 PANTHER PTHR13610 11 237 9.0E-38 T 19-04-2016 IPR026170 FAM173 family ALIDE2_RS00315 377d12091e2eee8045572e22d72a31ca 259 PANTHER PTHR13610:SF9 11 237 9.0E-38 T 19-04-2016 ALIDE2_RS00315 377d12091e2eee8045572e22d72a31ca 259 SUPERFAMILY SSF53335 87 221 1.78E-13 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS14435 67ac297ad93d16da0bc8e95caa4449ac 316 Pfam PF00849 RNA pseudouridylate synthase 100 247 2.7E-22 T 19-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS14435 67ac297ad93d16da0bc8e95caa4449ac 316 PANTHER PTHR11079 7 299 5.6E-89 T 19-04-2016 ALIDE2_RS14435 67ac297ad93d16da0bc8e95caa4449ac 316 SUPERFAMILY SSF55120 87 297 6.88E-52 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS14435 67ac297ad93d16da0bc8e95caa4449ac 316 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 139 153 - T 19-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS14435 67ac297ad93d16da0bc8e95caa4449ac 316 PANTHER PTHR11079:SF61 7 299 5.6E-89 T 19-04-2016 ALIDE2_RS01655 fdad1b2885f6b9b545dd8ee04183770f 329 PIRSF PIRSF017082 1 329 1.5E-79 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01655 fdad1b2885f6b9b545dd8ee04183770f 329 SUPERFAMILY SSF53850 115 286 1.74E-10 T 19-04-2016 ALIDE2_RS01655 fdad1b2885f6b9b545dd8ee04183770f 329 PANTHER PTHR30349:SF16 7 286 1.6E-74 T 19-04-2016 ALIDE2_RS01655 fdad1b2885f6b9b545dd8ee04183770f 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 325 9.3E-80 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01655 fdad1b2885f6b9b545dd8ee04183770f 329 PANTHER PTHR30349 7 286 1.6E-74 T 19-04-2016 ALIDE2_RS01890 d7063a25a105ebfad80eba7d3cfb2d21 519 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 387 514 3.1E-42 T 19-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01890 d7063a25a105ebfad80eba7d3cfb2d21 519 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 97 5.6E-14 T 19-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01890 d7063a25a105ebfad80eba7d3cfb2d21 519 PANTHER PTHR15184 1 501 1.6E-280 T 19-04-2016 ALIDE2_RS01890 d7063a25a105ebfad80eba7d3cfb2d21 519 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 380 1.7E-73 T 19-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01890 d7063a25a105ebfad80eba7d3cfb2d21 519 SUPERFAMILY SSF47917 388 518 4.71E-43 T 19-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01890 d7063a25a105ebfad80eba7d3cfb2d21 519 PANTHER PTHR15184:SF3 1 501 1.6E-280 T 19-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01890 d7063a25a105ebfad80eba7d3cfb2d21 519 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 519 1.2E-240 T 19-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01890 d7063a25a105ebfad80eba7d3cfb2d21 519 SUPERFAMILY SSF50615 10 99 4.91E-26 T 19-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01890 d7063a25a105ebfad80eba7d3cfb2d21 519 SUPERFAMILY SSF52540 101 386 1.36E-91 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01890 d7063a25a105ebfad80eba7d3cfb2d21 519 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 519 48.767 T 19-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01890 d7063a25a105ebfad80eba7d3cfb2d21 519 Gene3D G3DSA:3.40.50.300 99 387 1.5E-112 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01890 d7063a25a105ebfad80eba7d3cfb2d21 519 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 371 380 - T 19-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01890 d7063a25a105ebfad80eba7d3cfb2d21 519 Gene3D G3DSA:2.40.30.20 1 98 2.9E-32 T 19-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01890 d7063a25a105ebfad80eba7d3cfb2d21 519 Gene3D G3DSA:1.20.150.20 388 518 2.2E-47 T 19-04-2016 ALIDE2_RS07780 cb4d5b57efa1e5083baf0b64410f23c1 315 PANTHER PTHR24559 164 294 2.3E-20 T 19-04-2016 ALIDE2_RS07780 cb4d5b57efa1e5083baf0b64410f23c1 315 SUPERFAMILY SSF53098 146 302 1.9E-35 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS07780 cb4d5b57efa1e5083baf0b64410f23c1 315 Pfam PF13011 leucine-zipper of insertion element IS481 2 84 7.1E-15 T 19-04-2016 IPR024967 DNA-binding domain, IS481-type ALIDE2_RS07780 cb4d5b57efa1e5083baf0b64410f23c1 315 Pfam PF00665 Integrase core domain 147 262 6.2E-29 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS07780 cb4d5b57efa1e5083baf0b64410f23c1 315 Gene3D G3DSA:3.30.420.10 145 299 6.6E-39 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS07780 cb4d5b57efa1e5083baf0b64410f23c1 315 Gene3D G3DSA:1.10.10.10 79 105 4.4E-4 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18885 e58a398c454d28abea6af1cd1b4f0255 182 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 155 45.221 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ALIDE2_RS18885 e58a398c454d28abea6af1cd1b4f0255 182 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 1.2E-32 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ALIDE2_RS18885 e58a398c454d28abea6af1cd1b4f0255 182 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 85 101 1.2E-32 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ALIDE2_RS18885 e58a398c454d28abea6af1cd1b4f0255 182 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 109 128 1.2E-32 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ALIDE2_RS18885 e58a398c454d28abea6af1cd1b4f0255 182 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 63 79 1.2E-32 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ALIDE2_RS18885 e58a398c454d28abea6af1cd1b4f0255 182 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.2E-32 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ALIDE2_RS18885 e58a398c454d28abea6af1cd1b4f0255 182 SUPERFAMILY SSF53098 1 155 2.05E-50 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS18885 e58a398c454d28abea6af1cd1b4f0255 182 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 155 6.8E-52 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ALIDE2_RS18885 e58a398c454d28abea6af1cd1b4f0255 182 Gene3D G3DSA:3.30.420.10 1 156 4.0E-60 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS18885 e58a398c454d28abea6af1cd1b4f0255 182 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 152 2.7E-47 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ALIDE2_RS18885 e58a398c454d28abea6af1cd1b4f0255 182 PANTHER PTHR30194 1 171 6.4E-59 T 19-04-2016 ALIDE2_RS18885 e58a398c454d28abea6af1cd1b4f0255 182 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 115 149 - T 19-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 ALIDE2_RS14460 69840f11503e92940901f93a85436c23 324 SUPERFAMILY SSF53850 109 289 3.51E-14 T 19-04-2016 ALIDE2_RS14460 69840f11503e92940901f93a85436c23 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 320 1.2E-84 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS14460 69840f11503e92940901f93a85436c23 324 PANTHER PTHR30349:SF16 1 321 9.0E-90 T 19-04-2016 ALIDE2_RS14460 69840f11503e92940901f93a85436c23 324 PANTHER PTHR30349 1 321 9.0E-90 T 19-04-2016 ALIDE2_RS14460 69840f11503e92940901f93a85436c23 324 PIRSF PIRSF017082 1 323 7.5E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS11185 3eee50510a7beeb85c9091edb6ac433e 124 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 27 120 2.3E-29 T 19-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 ALIDE2_RS11185 3eee50510a7beeb85c9091edb6ac433e 124 PANTHER PTHR36835 12 123 5.2E-26 T 19-04-2016 ALIDE2_RS11185 3eee50510a7beeb85c9091edb6ac433e 124 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 31 104 1.2E-15 T 19-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 ALIDE2_RS10595 750aff04bd6b5eab03634f95f9e0ec16 149 PANTHER PTHR30455:SF2 2 149 2.1E-60 T 19-04-2016 ALIDE2_RS10595 750aff04bd6b5eab03634f95f9e0ec16 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 144 2.1E-55 T 19-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 ALIDE2_RS10595 750aff04bd6b5eab03634f95f9e0ec16 149 Pfam PF03477 ATP cone domain 51 136 6.9E-13 T 19-04-2016 IPR005144 ATP-cone domain ALIDE2_RS10595 750aff04bd6b5eab03634f95f9e0ec16 149 PANTHER PTHR30455 2 149 2.1E-60 T 19-04-2016 ALIDE2_RS10595 750aff04bd6b5eab03634f95f9e0ec16 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 82.469 T 19-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 ALIDE2_RS00650 33786d9d62503bec6da3585b93ca1ac8 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS00650 33786d9d62503bec6da3585b93ca1ac8 384 Gene3D G3DSA:1.20.140.10 230 384 7.5E-54 T 19-04-2016 ALIDE2_RS00650 33786d9d62503bec6da3585b93ca1ac8 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 224 5.4E-25 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS00650 33786d9d62503bec6da3585b93ca1ac8 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 383 4.6E-39 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00650 33786d9d62503bec6da3585b93ca1ac8 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 127 139 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS00650 33786d9d62503bec6da3585b93ca1ac8 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 121 6.2E-33 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00650 33786d9d62503bec6da3585b93ca1ac8 384 PANTHER PTHR10909 1 384 1.7E-194 T 19-04-2016 ALIDE2_RS00650 33786d9d62503bec6da3585b93ca1ac8 384 Gene3D G3DSA:2.40.110.10 124 229 2.1E-38 T 19-04-2016 ALIDE2_RS00650 33786d9d62503bec6da3585b93ca1ac8 384 SUPERFAMILY SSF56645 7 248 2.36E-81 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS00650 33786d9d62503bec6da3585b93ca1ac8 384 SUPERFAMILY SSF47203 234 384 3.7E-42 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00650 33786d9d62503bec6da3585b93ca1ac8 384 PANTHER PTHR10909:SF190 1 384 1.7E-194 T 19-04-2016 ALIDE2_RS00650 33786d9d62503bec6da3585b93ca1ac8 384 Gene3D G3DSA:1.10.540.10 10 122 3.4E-35 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS16140 5ed2761fca9fc9d39eb2f891960a75ab 137 SUPERFAMILY SSF51316 6 135 2.04E-54 T 19-04-2016 IPR011057 Mss4-like ALIDE2_RS16140 5ed2761fca9fc9d39eb2f891960a75ab 137 Gene3D G3DSA:2.170.150.20 2 134 1.1E-57 T 19-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 ALIDE2_RS16140 5ed2761fca9fc9d39eb2f891960a75ab 137 PANTHER PTHR10173 3 134 1.3E-55 T 19-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 ALIDE2_RS16140 5ed2761fca9fc9d39eb2f891960a75ab 137 Pfam PF01641 SelR domain 22 134 1.9E-48 T 19-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 ALIDE2_RS16140 5ed2761fca9fc9d39eb2f891960a75ab 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 7 134 2.3E-49 T 19-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 ALIDE2_RS16140 5ed2761fca9fc9d39eb2f891960a75ab 137 PANTHER PTHR10173:SF18 3 134 1.3E-55 T 19-04-2016 ALIDE2_RS06410 239e8b9f17eb17dd8afbd58680ee911a 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 51 67 8.2E-33 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS06410 239e8b9f17eb17dd8afbd58680ee911a 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 281 294 8.2E-33 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS06410 239e8b9f17eb17dd8afbd58680ee911a 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 258 276 8.2E-33 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS06410 239e8b9f17eb17dd8afbd58680ee911a 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 70 88 8.2E-33 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS06410 239e8b9f17eb17dd8afbd58680ee911a 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 91 101 8.2E-33 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS06410 239e8b9f17eb17dd8afbd58680ee911a 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 8.2E-33 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS06410 239e8b9f17eb17dd8afbd58680ee911a 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 332 347 8.2E-33 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS06410 239e8b9f17eb17dd8afbd58680ee911a 372 Pfam PF13458 Periplasmic binding protein 28 366 9.8E-67 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS06410 239e8b9f17eb17dd8afbd58680ee911a 372 Gene3D G3DSA:3.40.50.2300 28 228 5.7E-67 T 19-04-2016 ALIDE2_RS06410 239e8b9f17eb17dd8afbd58680ee911a 372 PANTHER PTHR30483 5 365 9.4E-118 T 19-04-2016 ALIDE2_RS06410 239e8b9f17eb17dd8afbd58680ee911a 372 PANTHER PTHR30483:SF12 5 365 9.4E-118 T 19-04-2016 ALIDE2_RS06410 239e8b9f17eb17dd8afbd58680ee911a 372 SUPERFAMILY SSF53822 29 367 7.06E-94 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS20010 eef17d11b3ff0fe7a66069a7c63916fa 111 SUPERFAMILY SSF51182 14 109 8.54E-18 T 19-04-2016 IPR011051 RmlC-like cupin domain ALIDE2_RS20010 eef17d11b3ff0fe7a66069a7c63916fa 111 Gene3D G3DSA:2.60.120.10 8 105 1.6E-19 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS20010 eef17d11b3ff0fe7a66069a7c63916fa 111 PANTHER PTHR37694 24 105 3.0E-13 T 19-04-2016 ALIDE2_RS20010 eef17d11b3ff0fe7a66069a7c63916fa 111 Pfam PF07883 Cupin domain 45 102 2.8E-9 T 19-04-2016 IPR013096 Cupin 2, conserved barrel ALIDE2_RS14785 0632751c65436e50f2eaff1be0b16acd 174 Pfam PF10502 Signal peptidase, peptidase S26 25 170 7.9E-53 T 19-04-2016 IPR019533 Peptidase S26 ALIDE2_RS14785 0632751c65436e50f2eaff1be0b16acd 174 SUPERFAMILY SSF51306 51 169 7.32E-19 T 19-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C ALIDE2_RS14785 0632751c65436e50f2eaff1be0b16acd 174 Gene3D G3DSA:2.10.109.10 132 171 9.3E-9 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS14785 0632751c65436e50f2eaff1be0b16acd 174 Gene3D G3DSA:2.10.109.10 56 94 9.3E-9 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 PIRSF PIRSF006288 8 874 7.3E-289 T 19-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 Pfam PF13740 ACT domain 805 871 2.8E-5 T 19-04-2016 ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 Pfam PF08335 GlnD PII-uridylyltransferase 178 322 2.1E-28 T 19-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 SUPERFAMILY SSF109604 425 549 8.63E-16 T 19-04-2016 ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 Gene3D G3DSA:1.10.3210.10 428 614 3.9E-22 T 19-04-2016 IPR006674 HD domain ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 SUPERFAMILY SSF55021 693 757 5.83E-9 T 19-04-2016 ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 Pfam PF01966 HD domain 459 587 1.3E-9 T 19-04-2016 IPR006674 HD domain ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 SUPERFAMILY SSF81301 16 170 1.44E-22 T 19-04-2016 ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 PANTHER PTHR13734 111 690 4.7E-97 T 19-04-2016 ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 SUPERFAMILY SSF81593 180 289 8.63E-7 T 19-04-2016 ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 SMART SM00471 454 601 2.2E-6 T 19-04-2016 IPR003607 HD/PDEase domain ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 SUPERFAMILY SSF55021 802 854 5.0E-9 T 19-04-2016 ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 Gene3D G3DSA:3.30.460.10 72 168 6.5E-6 T 19-04-2016 ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 316.489 T 19-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 41 871 3.7E-233 T 19-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 PANTHER PTHR13734:SF45 111 690 4.7E-97 T 19-04-2016 ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 Gene3D G3DSA:3.30.70.260 694 754 8.2E-5 T 19-04-2016 ALIDE2_RS14555 7c91a9b9bdf38b1aa3a901b935195eac 874 Gene3D G3DSA:3.30.70.260 802 868 6.0E-12 T 19-04-2016 ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 PANTHER PTHR24960 225 371 2.1E-70 T 19-04-2016 ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 PANTHER PTHR24960 550 681 2.1E-70 T 19-04-2016 ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 SUPERFAMILY SSF54862 551 651 8.82E-53 T 19-04-2016 ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 SUPERFAMILY SSF54862 180 357 8.82E-53 T 19-04-2016 ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 Gene3D G3DSA:3.30.70.20 596 634 1.6E-5 T 19-04-2016 ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 Gene3D G3DSA:3.30.70.20 302 338 5.0E-15 T 19-04-2016 ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 Pfam PF00037 4Fe-4S binding domain 180 200 1.4E-6 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 Gene3D G3DSA:3.30.70.20 549 595 2.5E-15 T 19-04-2016 ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 Pfam PF12838 4Fe-4S dicluster domain 306 350 1.8E-8 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 Pfam PF13187 4Fe-4S dicluster domain 557 604 1.6E-7 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 Gene3D G3DSA:1.10.1060.10 455 456 4.0E-12 T 19-04-2016 ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 Gene3D G3DSA:1.10.1060.10 339 372 4.0E-12 T 19-04-2016 ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 Gene3D G3DSA:3.30.70.20 180 238 3.5E-13 T 19-04-2016 ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 558 569 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 185 196 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 336 347 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 589 600 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 PANTHER PTHR24960:SF43 225 371 2.1E-70 T 19-04-2016 ALIDE2_RS05240 8b6baa605f31874edde14501f806cf61 687 PANTHER PTHR24960:SF43 550 681 2.1E-70 T 19-04-2016 ALIDE2_RS09945 23a916a81fce86888cec986e806cb19d 123 SUPERFAMILY SSF109709 38 118 1.07E-6 T 19-04-2016 ALIDE2_RS09100 25c6b54cc0badfc56718407f5adbfe40 617 PANTHER PTHR30629 1 433 4.7E-147 T 19-04-2016 ALIDE2_RS09100 25c6b54cc0badfc56718407f5adbfe40 617 Gene3D G3DSA:1.10.150.130 98 196 3.2E-10 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS09100 25c6b54cc0badfc56718407f5adbfe40 617 PANTHER PTHR30629:SF4 1 433 4.7E-147 T 19-04-2016 ALIDE2_RS09100 25c6b54cc0badfc56718407f5adbfe40 617 Pfam PF00589 Phage integrase family 211 390 3.3E-18 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS09100 25c6b54cc0badfc56718407f5adbfe40 617 Gene3D G3DSA:1.10.443.10 211 397 1.1E-20 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS09100 25c6b54cc0badfc56718407f5adbfe40 617 SUPERFAMILY SSF56349 98 400 5.89E-49 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS09100 25c6b54cc0badfc56718407f5adbfe40 617 Pfam PF13356 Domain of unknown function (DUF4102) 3 87 4.4E-17 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 ALIDE2_RS16870 30f1f9aaef2b98159a8772eca9d7960b 348 SUPERFAMILY SSF103481 188 287 6.41E-11 T 19-04-2016 ALIDE2_RS16870 30f1f9aaef2b98159a8772eca9d7960b 348 SUPERFAMILY SSF103481 44 143 1.83E-15 T 19-04-2016 ALIDE2_RS16870 30f1f9aaef2b98159a8772eca9d7960b 348 PANTHER PTHR22911 5 311 2.9E-33 T 19-04-2016 ALIDE2_RS16870 30f1f9aaef2b98159a8772eca9d7960b 348 Pfam PF00892 EamA-like transporter family 4 139 1.5E-21 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS16870 30f1f9aaef2b98159a8772eca9d7960b 348 Pfam PF00892 EamA-like transporter family 156 282 2.3E-9 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS23000 87e5e49d35eda303ca459f318973eaba 515 PANTHER PTHR22855 7 515 4.1E-146 T 19-04-2016 ALIDE2_RS23000 87e5e49d35eda303ca459f318973eaba 515 Gene3D G3DSA:3.90.226.10 8 251 4.2E-50 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS23000 87e5e49d35eda303ca459f318973eaba 515 PANTHER PTHR22855:SF40 7 515 4.1E-146 T 19-04-2016 ALIDE2_RS23000 87e5e49d35eda303ca459f318973eaba 515 SUPERFAMILY SSF52096 2 263 3.32E-48 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS23000 87e5e49d35eda303ca459f318973eaba 515 Gene3D G3DSA:3.90.226.10 252 500 5.3E-59 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS23000 87e5e49d35eda303ca459f318973eaba 515 Pfam PF01039 Carboxyl transferase domain 29 501 5.0E-88 T 19-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS23000 87e5e49d35eda303ca459f318973eaba 515 SUPERFAMILY SSF52096 223 495 3.22E-67 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS03780 d300ce1d3888fcd9eca33f70ff402731 272 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 272 46.938 T 19-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 ALIDE2_RS03780 d300ce1d3888fcd9eca33f70ff402731 272 PANTHER PTHR34148:SF1 1 268 1.2E-42 T 19-04-2016 ALIDE2_RS03780 d300ce1d3888fcd9eca33f70ff402731 272 PANTHER PTHR34148 1 268 1.2E-42 T 19-04-2016 ALIDE2_RS03780 d300ce1d3888fcd9eca33f70ff402731 272 Pfam PF02654 Cobalamin-5-phosphate synthase 10 263 3.8E-49 T 19-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 ALIDE2_RS03795 7c304cd6ae07d9d235dfcf0e1456f172 205 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 46 203 1.8E-38 T 19-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 ALIDE2_RS03795 7c304cd6ae07d9d235dfcf0e1456f172 205 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 5 205 29.456 T 19-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 ALIDE2_RS03795 7c304cd6ae07d9d235dfcf0e1456f172 205 Gene3D G3DSA:1.20.1260.10 53 174 5.9E-9 T 19-04-2016 IPR012347 Ferritin-related ALIDE2_RS03795 7c304cd6ae07d9d235dfcf0e1456f172 205 PANTHER PTHR11237 1 205 2.1E-84 T 19-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 ALIDE2_RS03795 7c304cd6ae07d9d235dfcf0e1456f172 205 SUPERFAMILY SSF47240 45 178 8.12E-15 T 19-04-2016 IPR009078 Ferritin-like superfamily ALIDE2_RS03795 7c304cd6ae07d9d235dfcf0e1456f172 205 PANTHER PTHR11237:SF3 1 205 2.1E-84 T 19-04-2016 ALIDE2_RS22090 c22efc76ade5192caadf89fd7f522578 431 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 17 423 1.1E-181 T 19-04-2016 IPR011718 Glutamate--cysteine ligase GshA ALIDE2_RS22090 c22efc76ade5192caadf89fd7f522578 431 Pfam PF08886 Glutamate-cysteine ligase 17 420 2.1E-199 T 19-04-2016 IPR011718 Glutamate--cysteine ligase GshA ALIDE2_RS12515 c6d6457ac4ed61346e539ae6fa7bba36 578 Pfam PF08019 Domain of unknown function (DUF1705) 81 223 8.8E-40 T 19-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 ALIDE2_RS12515 c6d6457ac4ed61346e539ae6fa7bba36 578 Pfam PF00884 Sulfatase 259 555 4.7E-37 T 19-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 ALIDE2_RS12515 c6d6457ac4ed61346e539ae6fa7bba36 578 SUPERFAMILY SSF53649 259 566 5.45E-20 T 19-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 ALIDE2_RS12515 c6d6457ac4ed61346e539ae6fa7bba36 578 Gene3D G3DSA:3.40.720.10 259 561 5.9E-12 T 19-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 ALIDE2_RS12515 c6d6457ac4ed61346e539ae6fa7bba36 578 PANTHER PTHR30443 23 571 1.3E-181 T 19-04-2016 ALIDE2_RS12515 c6d6457ac4ed61346e539ae6fa7bba36 578 PANTHER PTHR30443:SF0 23 571 1.3E-181 T 19-04-2016 ALIDE2_RS06495 477df0a727050c444ba959b513c1a15a 272 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 249 6.3E-60 T 19-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS06495 477df0a727050c444ba959b513c1a15a 272 Gene3D G3DSA:3.30.70.580 2 103 1.0E-35 T 19-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS06495 477df0a727050c444ba959b513c1a15a 272 PIRSF PIRSF001430 1 265 3.2E-63 T 19-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS06495 477df0a727050c444ba959b513c1a15a 272 Pfam PF01416 tRNA pseudouridine synthase 142 250 2.5E-27 T 19-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS06495 477df0a727050c444ba959b513c1a15a 272 Pfam PF01416 tRNA pseudouridine synthase 8 101 1.2E-8 T 19-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS06495 477df0a727050c444ba959b513c1a15a 272 Gene3D G3DSA:3.30.70.660 106 250 8.0E-44 T 19-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS06495 477df0a727050c444ba959b513c1a15a 272 SUPERFAMILY SSF55120 1 263 3.31E-82 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS06495 477df0a727050c444ba959b513c1a15a 272 PANTHER PTHR11142 1 255 4.7E-86 T 19-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS06495 477df0a727050c444ba959b513c1a15a 272 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 255 31.289 T 19-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS02165 4295696a60fa60a66581c970a6e5117f 407 Gene3D G3DSA:1.10.443.10 209 387 6.6E-23 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS02165 4295696a60fa60a66581c970a6e5117f 407 PANTHER PTHR30629:SF3 1 398 3.7E-116 T 19-04-2016 ALIDE2_RS02165 4295696a60fa60a66581c970a6e5117f 407 Gene3D G3DSA:1.10.150.130 99 198 1.5E-19 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS02165 4295696a60fa60a66581c970a6e5117f 407 PANTHER PTHR30629 1 398 3.7E-116 T 19-04-2016 ALIDE2_RS02165 4295696a60fa60a66581c970a6e5117f 407 Pfam PF00589 Phage integrase family 210 379 1.9E-15 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS02165 4295696a60fa60a66581c970a6e5117f 407 Pfam PF13356 Domain of unknown function (DUF4102) 3 87 6.2E-18 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 ALIDE2_RS02165 4295696a60fa60a66581c970a6e5117f 407 SUPERFAMILY SSF56349 99 391 1.82E-60 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS06955 fb9c46db54e8bc0140920aa51345faab 212 Gene3D G3DSA:3.30.9.10 29 70 2.9E-7 T 19-04-2016 ALIDE2_RS06955 fb9c46db54e8bc0140920aa51345faab 212 SUPERFAMILY SSF51905 2 52 1.35E-7 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS06955 fb9c46db54e8bc0140920aa51345faab 212 Pfam PF01494 FAD binding domain 8 74 2.0E-12 T 19-04-2016 IPR002938 FAD-binding domain GO:0071949 ALIDE2_RS21225 15cab58c663ba9232ddaa7ca2cbc36ff 232 SUPERFAMILY SSF46785 9 105 3.14E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS21225 15cab58c663ba9232ddaa7ca2cbc36ff 232 SMART SM00895 88 220 1.4E-15 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS21225 15cab58c663ba9232ddaa7ca2cbc36ff 232 Gene3D G3DSA:1.20.120.530 82 226 7.3E-31 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS21225 15cab58c663ba9232ddaa7ca2cbc36ff 232 Gene3D G3DSA:1.10.10.10 6 79 1.3E-16 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS21225 15cab58c663ba9232ddaa7ca2cbc36ff 232 PANTHER PTHR11751 21 104 8.9E-17 T 19-04-2016 ALIDE2_RS21225 15cab58c663ba9232ddaa7ca2cbc36ff 232 Pfam PF07729 FCD domain 88 219 9.3E-23 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS21225 15cab58c663ba9232ddaa7ca2cbc36ff 232 SMART SM00345 20 78 1.0E-11 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS21225 15cab58c663ba9232ddaa7ca2cbc36ff 232 SUPERFAMILY SSF48008 85 226 1.83E-20 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS21225 15cab58c663ba9232ddaa7ca2cbc36ff 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 78 3.9E-15 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS03300 7954d0b9c704216e95cbda250cc38919 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 26.966 T 19-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS03300 7954d0b9c704216e95cbda250cc38919 142 PIRSF PIRSF002181 1 142 1.6E-46 T 19-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS03300 7954d0b9c704216e95cbda250cc38919 142 Pfam PF00572 Ribosomal protein L13 14 138 4.4E-53 T 19-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS03300 7954d0b9c704216e95cbda250cc38919 142 Gene3D G3DSA:3.90.1180.10 3 140 4.2E-60 T 19-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS03300 7954d0b9c704216e95cbda250cc38919 142 SUPERFAMILY SSF52161 1 139 1.15E-56 T 19-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS03300 7954d0b9c704216e95cbda250cc38919 142 PANTHER PTHR11545 1 142 2.1E-69 T 19-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS03300 7954d0b9c704216e95cbda250cc38919 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 140 1.0E-58 T 19-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01025 b88a40864715437893f526f07264fff8 257 PANTHER PTHR19370 4 256 4.0E-115 T 19-04-2016 ALIDE2_RS01025 b88a40864715437893f526f07264fff8 257 Pfam PF00175 Oxidoreductase NAD-binding domain 112 227 1.8E-7 T 19-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ALIDE2_RS01025 b88a40864715437893f526f07264fff8 257 Gene3D G3DSA:3.40.50.80 98 256 1.1E-43 T 19-04-2016 ALIDE2_RS01025 b88a40864715437893f526f07264fff8 257 Gene3D G3DSA:2.40.30.10 4 97 5.1E-30 T 19-04-2016 ALIDE2_RS01025 b88a40864715437893f526f07264fff8 257 SUPERFAMILY SSF63380 4 99 9.68E-25 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ALIDE2_RS01025 b88a40864715437893f526f07264fff8 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 6.9E-6 T 19-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ALIDE2_RS01025 b88a40864715437893f526f07264fff8 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 6.9E-6 T 19-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ALIDE2_RS01025 b88a40864715437893f526f07264fff8 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 6.9E-6 T 19-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ALIDE2_RS01025 b88a40864715437893f526f07264fff8 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 6.9E-6 T 19-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ALIDE2_RS01025 b88a40864715437893f526f07264fff8 257 SUPERFAMILY SSF52343 103 255 1.44E-37 T 19-04-2016 ALIDE2_RS01025 b88a40864715437893f526f07264fff8 257 Pfam PF00970 Oxidoreductase FAD-binding domain 18 98 4.9E-8 T 19-04-2016 IPR008333 Oxidoreductase, FAD-binding domain ALIDE2_RS01025 b88a40864715437893f526f07264fff8 257 PANTHER PTHR19370:SF98 4 256 4.0E-115 T 19-04-2016 ALIDE2_RS19215 affe862ffb4d6f97099b4635b5fbd1af 336 PANTHER PTHR30106 5 334 4.6E-51 T 19-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 ALIDE2_RS19215 affe862ffb4d6f97099b4635b5fbd1af 336 Pfam PF03601 Conserved hypothetical protein 698 17 314 7.0E-69 T 19-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 ALIDE2_RS01030 0c53782cfccdf7f3eb1cfd70742712ca 398 Pfam PF13458 Periplasmic binding protein 39 363 2.4E-74 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS01030 0c53782cfccdf7f3eb1cfd70742712ca 398 PANTHER PTHR30483:SF15 5 394 3.0E-146 T 19-04-2016 ALIDE2_RS01030 0c53782cfccdf7f3eb1cfd70742712ca 398 PANTHER PTHR30483 5 394 3.0E-146 T 19-04-2016 ALIDE2_RS01030 0c53782cfccdf7f3eb1cfd70742712ca 398 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 257 275 1.2E-8 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS01030 0c53782cfccdf7f3eb1cfd70742712ca 398 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 333 348 1.2E-8 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS01030 0c53782cfccdf7f3eb1cfd70742712ca 398 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 65 83 1.2E-8 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS01030 0c53782cfccdf7f3eb1cfd70742712ca 398 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 46 62 1.2E-8 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS01030 0c53782cfccdf7f3eb1cfd70742712ca 398 SUPERFAMILY SSF53822 38 382 2.73E-85 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS01030 0c53782cfccdf7f3eb1cfd70742712ca 398 Gene3D G3DSA:3.40.50.2300 38 222 8.5E-46 T 19-04-2016 ALIDE2_RS10265 d8b47ca29b92eac063ab44f5e800b634 156 Pfam PF06146 Phosphate-starvation-inducible E 74 142 5.4E-16 T 19-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like ALIDE2_RS20585 37b8e7cfe4599d69d8ec9f3a2f4f089d 240 Pfam PF00005 ABC transporter 21 167 4.3E-30 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS20585 37b8e7cfe4599d69d8ec9f3a2f4f089d 240 SMART SM00382 30 218 1.5E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS20585 37b8e7cfe4599d69d8ec9f3a2f4f089d 240 PANTHER PTHR24220 7 238 3.0E-123 T 19-04-2016 ALIDE2_RS20585 37b8e7cfe4599d69d8ec9f3a2f4f089d 240 PIRSF PIRSF039137 1 240 1.1E-104 T 19-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 ALIDE2_RS20585 37b8e7cfe4599d69d8ec9f3a2f4f089d 240 Gene3D G3DSA:3.40.50.300 2 236 1.1E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20585 37b8e7cfe4599d69d8ec9f3a2f4f089d 240 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS20585 37b8e7cfe4599d69d8ec9f3a2f4f089d 240 SUPERFAMILY SSF52540 5 237 1.74E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20585 37b8e7cfe4599d69d8ec9f3a2f4f089d 240 PANTHER PTHR24220:SF568 7 238 3.0E-123 T 19-04-2016 ALIDE2_RS06085 887c4a406172571223762f0426d2e028 422 Pfam PF04285 Protein of unknown function (DUF444) 4 418 8.3E-171 T 19-04-2016 IPR006698 Uncharacterised protein family UPF0229 ALIDE2_RS06085 887c4a406172571223762f0426d2e028 422 PANTHER PTHR30510 1 422 5.2E-142 T 19-04-2016 ALIDE2_RS06085 887c4a406172571223762f0426d2e028 422 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 420 35.945 T 19-04-2016 IPR006698 Uncharacterised protein family UPF0229 ALIDE2_RS15790 cde1d7b5cbcef16a3c1d5a2c4f2b537f 270 PIRSF PIRSF029755 3 270 2.2E-120 T 19-04-2016 IPR016938 Uncharacterised protein family UPF0317 ALIDE2_RS15790 cde1d7b5cbcef16a3c1d5a2c4f2b537f 270 SUPERFAMILY SSF160920 16 263 5.23E-113 T 19-04-2016 ALIDE2_RS15790 cde1d7b5cbcef16a3c1d5a2c4f2b537f 270 PANTHER PTHR32022 2 268 2.9E-131 T 19-04-2016 ALIDE2_RS15790 cde1d7b5cbcef16a3c1d5a2c4f2b537f 270 Hamap MF_01830 UPF0317 protein . 16 270 53.422 T 19-04-2016 IPR016938 Uncharacterised protein family UPF0317 ALIDE2_RS15790 cde1d7b5cbcef16a3c1d5a2c4f2b537f 270 Pfam PF07286 Protein of unknown function (DUF1445) 120 262 4.9E-67 T 19-04-2016 IPR009906 Protein of unknown function DUF1445 ALIDE2_RS15790 cde1d7b5cbcef16a3c1d5a2c4f2b537f 270 Gene3D G3DSA:3.40.1640.10 9 172 7.0E-66 T 19-04-2016 ALIDE2_RS01495 ce3af4eb09d5899d81128a6fce47d090 242 Pfam PF09339 IclR helix-turn-helix domain 18 67 5.4E-11 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS01495 ce3af4eb09d5899d81128a6fce47d090 242 SUPERFAMILY SSF55781 80 235 5.89E-21 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS01495 ce3af4eb09d5899d81128a6fce47d090 242 PANTHER PTHR30136 8 240 2.5E-37 T 19-04-2016 ALIDE2_RS01495 ce3af4eb09d5899d81128a6fce47d090 242 SMART SM00346 16 105 8.7E-14 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS01495 ce3af4eb09d5899d81128a6fce47d090 242 SUPERFAMILY SSF46785 16 86 6.39E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01495 ce3af4eb09d5899d81128a6fce47d090 242 PANTHER PTHR30136:SF14 8 240 2.5E-37 T 19-04-2016 ALIDE2_RS01495 ce3af4eb09d5899d81128a6fce47d090 242 Gene3D G3DSA:1.10.10.10 3 76 2.3E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01495 ce3af4eb09d5899d81128a6fce47d090 242 Gene3D G3DSA:3.30.450.40 82 236 1.8E-21 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS01495 ce3af4eb09d5899d81128a6fce47d090 242 Pfam PF01614 Bacterial transcriptional regulator 186 229 1.2E-5 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS08480 9ada56563af4abfba8e8fae99a10a42a 573 Hamap MF_00577 Urocanate hydratase [hutU]. 4 573 49.792 T 19-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 ALIDE2_RS08480 9ada56563af4abfba8e8fae99a10a42a 573 Gene3D G3DSA:3.40.50.10730 153 366 3.8E-89 T 19-04-2016 ALIDE2_RS08480 9ada56563af4abfba8e8fae99a10a42a 573 ProSitePatterns PS01233 Urocanase signature. 459 474 - T 19-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 ALIDE2_RS08480 9ada56563af4abfba8e8fae99a10a42a 573 SUPERFAMILY SSF111326 17 572 2.49E-254 T 19-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 ALIDE2_RS08480 9ada56563af4abfba8e8fae99a10a42a 573 PANTHER PTHR12216 16 573 0.0 T 19-04-2016 ALIDE2_RS08480 9ada56563af4abfba8e8fae99a10a42a 573 PANTHER PTHR12216:SF3 16 573 0.0 T 19-04-2016 ALIDE2_RS08480 9ada56563af4abfba8e8fae99a10a42a 573 PIRSF PIRSF001423 7 573 3.6E-290 T 19-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 ALIDE2_RS08480 9ada56563af4abfba8e8fae99a10a42a 573 Gene3D G3DSA:3.40.1770.10 20 152 5.8E-161 T 19-04-2016 ALIDE2_RS08480 9ada56563af4abfba8e8fae99a10a42a 573 Gene3D G3DSA:3.40.1770.10 377 572 5.8E-161 T 19-04-2016 ALIDE2_RS08480 9ada56563af4abfba8e8fae99a10a42a 573 Pfam PF01175 Urocanase 23 564 3.6E-255 T 19-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 ALIDE2_RS08480 9ada56563af4abfba8e8fae99a10a42a 573 TIGRFAM TIGR01228 hutU: urocanate hydratase 22 571 2.8E-288 T 19-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 ALIDE2_RS00660 37a786fe295cd14896c5e38801e4d091 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 1.4E-129 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS00660 37a786fe295cd14896c5e38801e4d091 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 19-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 ALIDE2_RS00660 37a786fe295cd14896c5e38801e4d091 392 PIRSF PIRSF000429 1 392 4.0E-117 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS00660 37a786fe295cd14896c5e38801e4d091 392 SUPERFAMILY SSF53901 1 264 2.76E-69 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00660 37a786fe295cd14896c5e38801e4d091 392 Pfam PF02803 Thiolase, C-terminal domain 270 391 3.2E-40 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS00660 37a786fe295cd14896c5e38801e4d091 392 Gene3D G3DSA:3.40.47.10 5 126 6.6E-63 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00660 37a786fe295cd14896c5e38801e4d091 392 Gene3D G3DSA:3.40.47.10 188 275 6.6E-63 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00660 37a786fe295cd14896c5e38801e4d091 392 Pfam PF00108 Thiolase, N-terminal domain 5 262 1.8E-64 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS00660 37a786fe295cd14896c5e38801e4d091 392 SUPERFAMILY SSF53901 270 391 1.23E-40 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00660 37a786fe295cd14896c5e38801e4d091 392 Gene3D G3DSA:3.40.47.10 276 391 6.6E-54 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00660 37a786fe295cd14896c5e38801e4d091 392 Gene3D G3DSA:3.40.47.10 151 187 6.6E-54 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS00660 37a786fe295cd14896c5e38801e4d091 392 PANTHER PTHR18919 1 392 4.0E-183 T 19-04-2016 ALIDE2_RS00660 37a786fe295cd14896c5e38801e4d091 392 PANTHER PTHR18919:SF71 1 392 4.0E-183 T 19-04-2016 ALIDE2_RS05350 22aecc3b5182002121ad1de87ff6ee5d 158 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 15 84 1.1E-7 T 19-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 ALIDE2_RS05350 22aecc3b5182002121ad1de87ff6ee5d 158 Gene3D G3DSA:3.10.50.40 14 80 3.3E-12 T 19-04-2016 ALIDE2_RS05350 22aecc3b5182002121ad1de87ff6ee5d 158 Gene3D G3DSA:3.10.50.40 140 157 3.3E-12 T 19-04-2016 ALIDE2_RS05350 22aecc3b5182002121ad1de87ff6ee5d 158 SUPERFAMILY SSF54534 15 157 1.85E-24 T 19-04-2016 ALIDE2_RS12200 4a04e56c2b48187cfa11adf10717a108 827 Gene3D G3DSA:1.10.3810.10 79 255 1.8E-67 T 19-04-2016 ALIDE2_RS12200 4a04e56c2b48187cfa11adf10717a108 827 SUPERFAMILY SSF53955 68 282 2.11E-68 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS12200 4a04e56c2b48187cfa11adf10717a108 827 Pfam PF00912 Transglycosylase 78 254 2.6E-59 T 19-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 ALIDE2_RS12200 4a04e56c2b48187cfa11adf10717a108 827 SUPERFAMILY SSF56601 287 341 1.42E-104 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS12200 4a04e56c2b48187cfa11adf10717a108 827 SUPERFAMILY SSF56601 235 257 1.42E-104 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS12200 4a04e56c2b48187cfa11adf10717a108 827 SUPERFAMILY SSF56601 400 692 1.42E-104 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS12200 4a04e56c2b48187cfa11adf10717a108 827 PANTHER PTHR32282:SF5 399 800 2.2E-169 T 19-04-2016 ALIDE2_RS12200 4a04e56c2b48187cfa11adf10717a108 827 PANTHER PTHR32282:SF5 7 338 2.2E-169 T 19-04-2016 ALIDE2_RS12200 4a04e56c2b48187cfa11adf10717a108 827 Gene3D G3DSA:3.40.710.10 256 341 5.5E-108 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS12200 4a04e56c2b48187cfa11adf10717a108 827 Gene3D G3DSA:3.40.710.10 398 699 5.5E-108 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS12200 4a04e56c2b48187cfa11adf10717a108 827 Pfam PF00905 Penicillin binding protein transpeptidase domain 407 645 1.5E-34 T 19-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ALIDE2_RS12200 4a04e56c2b48187cfa11adf10717a108 827 PANTHER PTHR32282 399 800 2.2E-169 T 19-04-2016 ALIDE2_RS12200 4a04e56c2b48187cfa11adf10717a108 827 PANTHER PTHR32282 7 338 2.2E-169 T 19-04-2016 ALIDE2_RS20985 e24766bc0a37b20663dd15a5f8c455c4 227 Hamap MF_00415 Flagellar L-ring protein [flgH]. 5 225 23.475 T 19-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ALIDE2_RS20985 e24766bc0a37b20663dd15a5f8c455c4 227 PRINTS PR01008 Flagellar L-ring protein signature 204 218 1.3E-19 T 19-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ALIDE2_RS20985 e24766bc0a37b20663dd15a5f8c455c4 227 PRINTS PR01008 Flagellar L-ring protein signature 141 156 1.3E-19 T 19-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ALIDE2_RS20985 e24766bc0a37b20663dd15a5f8c455c4 227 PRINTS PR01008 Flagellar L-ring protein signature 167 183 1.3E-19 T 19-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ALIDE2_RS20985 e24766bc0a37b20663dd15a5f8c455c4 227 PRINTS PR01008 Flagellar L-ring protein signature 70 82 1.3E-19 T 19-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ALIDE2_RS20985 e24766bc0a37b20663dd15a5f8c455c4 227 PRINTS PR01008 Flagellar L-ring protein signature 188 202 1.3E-19 T 19-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ALIDE2_RS20985 e24766bc0a37b20663dd15a5f8c455c4 227 PANTHER PTHR34933 26 227 1.4E-47 T 19-04-2016 ALIDE2_RS20985 e24766bc0a37b20663dd15a5f8c455c4 227 Pfam PF02107 Flagellar L-ring protein 49 226 1.0E-55 T 19-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ALIDE2_RS03460 556987e9abb6832927cbb64853d96507 348 SUPERFAMILY SSF55729 155 315 2.01E-34 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS03460 556987e9abb6832927cbb64853d96507 348 Gene3D G3DSA:3.40.630.30 104 298 7.3E-40 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS03460 556987e9abb6832927cbb64853d96507 348 TIGRFAM TIGR03019 pepcterm_femAB: FemAB-related protein, PEP-CTERM system-associated 18 348 3.2E-154 T 19-04-2016 IPR017469 PEP-CTERM system-associated, FemAB-related ALIDE2_RS03460 556987e9abb6832927cbb64853d96507 348 Pfam PF13480 Acetyltransferase (GNAT) domain 174 281 8.5E-14 T 19-04-2016 ALIDE2_RS00665 ff565c38e5cf133a36d319f3634c85aa 255 PANTHER PTHR24322 161 197 1.9E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00665 ff565c38e5cf133a36d319f3634c85aa 255 PANTHER PTHR24322 11 145 1.9E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00665 ff565c38e5cf133a36d319f3634c85aa 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.9E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00665 ff565c38e5cf133a36d319f3634c85aa 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 3.9E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00665 ff565c38e5cf133a36d319f3634c85aa 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 3.9E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00665 ff565c38e5cf133a36d319f3634c85aa 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.9E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00665 ff565c38e5cf133a36d319f3634c85aa 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 3.9E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00665 ff565c38e5cf133a36d319f3634c85aa 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 3.9E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00665 ff565c38e5cf133a36d319f3634c85aa 255 Pfam PF00106 short chain dehydrogenase 8 204 4.9E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00665 ff565c38e5cf133a36d319f3634c85aa 255 PANTHER PTHR24322:SF356 161 197 1.9E-39 T 19-04-2016 ALIDE2_RS00665 ff565c38e5cf133a36d319f3634c85aa 255 PANTHER PTHR24322:SF356 11 145 1.9E-39 T 19-04-2016 ALIDE2_RS00665 ff565c38e5cf133a36d319f3634c85aa 255 Gene3D G3DSA:3.40.50.720 5 252 3.1E-60 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00665 ff565c38e5cf133a36d319f3634c85aa 255 SUPERFAMILY SSF51735 6 251 1.51E-54 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00665 ff565c38e5cf133a36d319f3634c85aa 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 192 0.0076 T 19-04-2016 ALIDE2_RS00665 ff565c38e5cf133a36d319f3634c85aa 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS06235 cfd8ff3066e8151582a69901c6b4fa64 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 256 33.936 T 19-04-2016 IPR005583 Peroxide stress protein YaaA ALIDE2_RS06235 cfd8ff3066e8151582a69901c6b4fa64 257 PANTHER PTHR30283 2 256 6.6E-100 T 19-04-2016 ALIDE2_RS06235 cfd8ff3066e8151582a69901c6b4fa64 257 Pfam PF03883 Protein of unknown function (DUF328) 1 243 2.3E-88 T 19-04-2016 IPR005583 Peroxide stress protein YaaA ALIDE2_RS06235 cfd8ff3066e8151582a69901c6b4fa64 257 PANTHER PTHR30283:SF3 2 256 6.6E-100 T 19-04-2016 ALIDE2_RS21010 4dc1f909c914013f87dd3d89e658aff5 404 Gene3D G3DSA:1.10.3150.10 199 346 1.7E-17 T 19-04-2016 IPR013976 Metal-dependent hydrolase HDOD ALIDE2_RS21010 4dc1f909c914013f87dd3d89e658aff5 404 SUPERFAMILY SSF109604 198 394 1.19E-24 T 19-04-2016 ALIDE2_RS21010 4dc1f909c914013f87dd3d89e658aff5 404 PANTHER PTHR33525:SF4 192 350 9.2E-12 T 19-04-2016 ALIDE2_RS21010 4dc1f909c914013f87dd3d89e658aff5 404 Pfam PF08668 HDOD domain 201 322 7.2E-7 T 19-04-2016 IPR013976 Metal-dependent hydrolase HDOD ALIDE2_RS21010 4dc1f909c914013f87dd3d89e658aff5 404 PANTHER PTHR33525 192 350 9.2E-12 T 19-04-2016 ALIDE2_RS12355 f71cd577b54e5ea34a095d12050804e2 407 SUPERFAMILY SSF89796 16 405 3.4E-108 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS12355 f71cd577b54e5ea34a095d12050804e2 407 Gene3D G3DSA:3.40.50.10540 16 224 5.0E-90 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS12355 f71cd577b54e5ea34a095d12050804e2 407 Gene3D G3DSA:3.40.50.10540 315 405 5.0E-90 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS12355 f71cd577b54e5ea34a095d12050804e2 407 PANTHER PTHR24023:SF593 243 392 3.9E-24 T 19-04-2016 ALIDE2_RS12355 f71cd577b54e5ea34a095d12050804e2 407 PANTHER PTHR24023:SF593 23 221 3.9E-24 T 19-04-2016 ALIDE2_RS12355 f71cd577b54e5ea34a095d12050804e2 407 PANTHER PTHR24023 243 392 3.9E-24 T 19-04-2016 ALIDE2_RS12355 f71cd577b54e5ea34a095d12050804e2 407 PANTHER PTHR24023 23 221 3.9E-24 T 19-04-2016 ALIDE2_RS12355 f71cd577b54e5ea34a095d12050804e2 407 Gene3D G3DSA:3.30.1540.10 238 314 7.5E-14 T 19-04-2016 ALIDE2_RS12355 f71cd577b54e5ea34a095d12050804e2 407 Pfam PF02515 CoA-transferase family III 20 382 1.7E-96 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS13640 429bd6e33863e0dd53131f66053ef580 348 SUPERFAMILY SSF50974 15 347 8.37E-77 T 19-04-2016 IPR011045 Nitrous oxide reductase, N-terminal ALIDE2_RS13640 429bd6e33863e0dd53131f66053ef580 348 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 108 132 3.7E-7 T 19-04-2016 IPR011964 YVTN beta-propeller repeat ALIDE2_RS13640 429bd6e33863e0dd53131f66053ef580 348 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 133 173 1.5E-13 T 19-04-2016 IPR011964 YVTN beta-propeller repeat ALIDE2_RS13640 429bd6e33863e0dd53131f66053ef580 348 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 29 66 4.3E-10 T 19-04-2016 IPR011964 YVTN beta-propeller repeat ALIDE2_RS13640 429bd6e33863e0dd53131f66053ef580 348 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 308 346 2.6E-11 T 19-04-2016 IPR011964 YVTN beta-propeller repeat ALIDE2_RS13640 429bd6e33863e0dd53131f66053ef580 348 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 175 214 1.1E-13 T 19-04-2016 IPR011964 YVTN beta-propeller repeat ALIDE2_RS13640 429bd6e33863e0dd53131f66053ef580 348 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 217 255 8.0E-8 T 19-04-2016 IPR011964 YVTN beta-propeller repeat ALIDE2_RS13640 429bd6e33863e0dd53131f66053ef580 348 Gene3D G3DSA:2.130.10.10 20 348 8.7E-84 T 19-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ALIDE2_RS13640 429bd6e33863e0dd53131f66053ef580 348 Pfam PF02239 Cytochrome D1 heme domain 226 338 1.6E-6 T 19-04-2016 ALIDE2_RS13640 429bd6e33863e0dd53131f66053ef580 348 Pfam PF02239 Cytochrome D1 heme domain 104 212 4.6E-9 T 19-04-2016 ALIDE2_RS13640 429bd6e33863e0dd53131f66053ef580 348 PANTHER PTHR13833 106 346 2.2E-39 T 19-04-2016 ALIDE2_RS13140 3e290355d953b9f5b07244366349597f 196 SUPERFAMILY SSF111304 4 196 7.19E-70 T 19-04-2016 IPR023627 Recombination protein RecR ALIDE2_RS13140 3e290355d953b9f5b07244366349597f 196 Pfam PF02132 RecR protein 40 78 2.3E-14 T 19-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger ALIDE2_RS13140 3e290355d953b9f5b07244366349597f 196 PANTHER PTHR30446:SF0 1 196 3.9E-97 T 19-04-2016 ALIDE2_RS13140 3e290355d953b9f5b07244366349597f 196 PANTHER PTHR30446 1 196 3.9E-97 T 19-04-2016 ALIDE2_RS13140 3e290355d953b9f5b07244366349597f 196 TIGRFAM TIGR00615 recR: recombination protein RecR 5 196 1.5E-67 T 19-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 ALIDE2_RS13140 3e290355d953b9f5b07244366349597f 196 SMART SM00493 80 165 2.4E-10 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS13140 3e290355d953b9f5b07244366349597f 196 Pfam PF13662 Toprim domain 81 171 3.4E-23 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS13140 3e290355d953b9f5b07244366349597f 196 Hamap MF_00017 Recombination protein RecR [recR]. 1 196 96.921 T 19-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 ALIDE2_RS23055 ca5f66e45ffadf3827615e0a1ae55392 325 PANTHER PTHR30349 1 287 9.4E-67 T 19-04-2016 ALIDE2_RS23055 ca5f66e45ffadf3827615e0a1ae55392 325 PANTHER PTHR30349:SF1 1 287 9.4E-67 T 19-04-2016 ALIDE2_RS23055 ca5f66e45ffadf3827615e0a1ae55392 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 321 1.1E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS23055 ca5f66e45ffadf3827615e0a1ae55392 325 PIRSF PIRSF017082 1 325 3.2E-67 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS23055 ca5f66e45ffadf3827615e0a1ae55392 325 SUPERFAMILY SSF53850 114 284 3.26E-7 T 19-04-2016 ALIDE2_RS03785 f07f16c03bbb2a2e201ddbcda0bf2a2c 521 SUPERFAMILY SSF53686 7 360 4.19E-101 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS03785 f07f16c03bbb2a2e201ddbcda0bf2a2c 521 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 9 516 3.5E-241 T 19-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 ALIDE2_RS03785 f07f16c03bbb2a2e201ddbcda0bf2a2c 521 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 47 60 - T 19-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ALIDE2_RS03785 f07f16c03bbb2a2e201ddbcda0bf2a2c 521 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 315 1.3E-74 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS03785 f07f16c03bbb2a2e201ddbcda0bf2a2c 521 Gene3D G3DSA:3.40.1020.10 365 517 2.8E-53 T 19-04-2016 ALIDE2_RS03785 f07f16c03bbb2a2e201ddbcda0bf2a2c 521 SUPERFAMILY SSF55021 336 426 3.2E-22 T 19-04-2016 ALIDE2_RS03785 f07f16c03bbb2a2e201ddbcda0bf2a2c 521 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 429 516 1.9E-24 T 19-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 ALIDE2_RS03785 f07f16c03bbb2a2e201ddbcda0bf2a2c 521 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 328 422 1.1E-23 T 19-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 ALIDE2_RS03785 f07f16c03bbb2a2e201ddbcda0bf2a2c 521 PANTHER PTHR10314:SF30 1 372 3.6E-199 T 19-04-2016 ALIDE2_RS03785 f07f16c03bbb2a2e201ddbcda0bf2a2c 521 SUPERFAMILY SSF55021 423 516 7.32E-27 T 19-04-2016 ALIDE2_RS03785 f07f16c03bbb2a2e201ddbcda0bf2a2c 521 PANTHER PTHR10314 1 372 3.6E-199 T 19-04-2016 ALIDE2_RS03785 f07f16c03bbb2a2e201ddbcda0bf2a2c 521 Gene3D G3DSA:3.40.50.1100 74 331 5.7E-81 T 19-04-2016 ALIDE2_RS04070 a89b4c853fc15478840c805492953fb2 282 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS04070 a89b4c853fc15478840c805492953fb2 282 SMART SM00382 37 226 8.1E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS04070 a89b4c853fc15478840c805492953fb2 282 Pfam PF00005 ABC transporter 28 177 1.2E-26 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS04070 a89b4c853fc15478840c805492953fb2 282 Gene3D G3DSA:3.40.50.300 4 240 2.6E-70 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04070 a89b4c853fc15478840c805492953fb2 282 PANTHER PTHR24220 14 261 1.7E-134 T 19-04-2016 ALIDE2_RS04070 a89b4c853fc15478840c805492953fb2 282 PANTHER PTHR24220:SF368 14 261 1.7E-134 T 19-04-2016 ALIDE2_RS04070 a89b4c853fc15478840c805492953fb2 282 SUPERFAMILY SSF52540 12 240 5.32E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20085 643b87d3aa1e7a6278b3cfa330bb68d8 320 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 315 3.3E-64 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS20085 643b87d3aa1e7a6278b3cfa330bb68d8 320 PANTHER PTHR30349 5 278 1.1E-65 T 19-04-2016 ALIDE2_RS20085 643b87d3aa1e7a6278b3cfa330bb68d8 320 PIRSF PIRSF017082 1 318 1.0E-75 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS20085 643b87d3aa1e7a6278b3cfa330bb68d8 320 PANTHER PTHR30349:SF16 5 278 1.1E-65 T 19-04-2016 ALIDE2_RS20085 643b87d3aa1e7a6278b3cfa330bb68d8 320 Gene3D G3DSA:3.40.190.10 125 207 2.5E-7 T 19-04-2016 ALIDE2_RS20085 643b87d3aa1e7a6278b3cfa330bb68d8 320 SUPERFAMILY SSF53850 113 289 2.9E-11 T 19-04-2016 ALIDE2_RS00175 2b254fc7a87ab1f6791597e6d23f863c 266 PANTHER PTHR11941 3 222 4.6E-65 T 19-04-2016 ALIDE2_RS00175 2b254fc7a87ab1f6791597e6d23f863c 266 Gene3D G3DSA:3.90.226.10 1 243 1.6E-60 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS00175 2b254fc7a87ab1f6791597e6d23f863c 266 PANTHER PTHR11941:SF85 3 222 4.6E-65 T 19-04-2016 ALIDE2_RS00175 2b254fc7a87ab1f6791597e6d23f863c 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 236 1.0E-42 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS00175 2b254fc7a87ab1f6791597e6d23f863c 266 SUPERFAMILY SSF52096 2 250 1.16E-60 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS09310 a9d4874da73a9eac884d5b783de0a6d8 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 117 2.1E-24 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS09310 a9d4874da73a9eac884d5b783de0a6d8 379 SUPERFAMILY SSF56645 4 239 9.29E-59 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS09310 a9d4874da73a9eac884d5b783de0a6d8 379 PIRSF PIRSF016578 6 361 1.4E-15 T 19-04-2016 ALIDE2_RS09310 a9d4874da73a9eac884d5b783de0a6d8 379 Gene3D G3DSA:1.20.140.10 219 377 9.7E-59 T 19-04-2016 ALIDE2_RS09310 a9d4874da73a9eac884d5b783de0a6d8 379 SUPERFAMILY SSF47203 227 377 4.51E-49 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS09310 a9d4874da73a9eac884d5b783de0a6d8 379 Gene3D G3DSA:2.40.110.10 122 218 4.5E-27 T 19-04-2016 ALIDE2_RS09310 a9d4874da73a9eac884d5b783de0a6d8 379 PANTHER PTHR10909 4 377 5.5E-105 T 19-04-2016 ALIDE2_RS09310 a9d4874da73a9eac884d5b783de0a6d8 379 Gene3D G3DSA:1.10.540.10 4 119 6.3E-28 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS09310 a9d4874da73a9eac884d5b783de0a6d8 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 2.7E-46 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS09310 a9d4874da73a9eac884d5b783de0a6d8 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 215 3.0E-19 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS11485 8233d6d7d9f3fb1dadec61a68cdf284c 175 SUPERFAMILY SSF50891 2 172 1.61E-53 T 19-04-2016 IPR029000 Cyclophilin-like domain ALIDE2_RS11485 8233d6d7d9f3fb1dadec61a68cdf284c 175 PANTHER PTHR11071 21 172 1.4E-56 T 19-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 ALIDE2_RS11485 8233d6d7d9f3fb1dadec61a68cdf284c 175 Gene3D G3DSA:2.40.100.10 3 172 3.8E-51 T 19-04-2016 IPR029000 Cyclophilin-like domain ALIDE2_RS11485 8233d6d7d9f3fb1dadec61a68cdf284c 175 PIRSF PIRSF001467 1 174 2.7E-26 T 19-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 ALIDE2_RS11485 8233d6d7d9f3fb1dadec61a68cdf284c 175 PANTHER PTHR11071:SF265 21 172 1.4E-56 T 19-04-2016 ALIDE2_RS11485 8233d6d7d9f3fb1dadec61a68cdf284c 175 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 16 170 2.3E-44 T 19-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 ALIDE2_RS11485 8233d6d7d9f3fb1dadec61a68cdf284c 175 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 53 65 5.1E-12 T 19-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 ALIDE2_RS11485 8233d6d7d9f3fb1dadec61a68cdf284c 175 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 5.1E-12 T 19-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 ALIDE2_RS11485 8233d6d7d9f3fb1dadec61a68cdf284c 175 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 130 145 5.1E-12 T 19-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 ALIDE2_RS11485 8233d6d7d9f3fb1dadec61a68cdf284c 175 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 48 65 - T 19-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 ALIDE2_RS12335 08157a1d3cddd386da77312e3eafa205 611 Gene3D G3DSA:3.40.50.980 15 198 7.4E-34 T 19-04-2016 ALIDE2_RS12335 08157a1d3cddd386da77312e3eafa205 611 Gene3D G3DSA:2.30.38.10 411 474 5.3E-16 T 19-04-2016 ALIDE2_RS12335 08157a1d3cddd386da77312e3eafa205 611 Gene3D G3DSA:3.30.300.30 478 599 2.4E-5 T 19-04-2016 ALIDE2_RS12335 08157a1d3cddd386da77312e3eafa205 611 PANTHER PTHR24096 15 611 8.5E-170 T 19-04-2016 ALIDE2_RS12335 08157a1d3cddd386da77312e3eafa205 611 Pfam PF00501 AMP-binding enzyme 24 480 6.2E-92 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS12335 08157a1d3cddd386da77312e3eafa205 611 PANTHER PTHR24096:SF193 15 611 8.5E-170 T 19-04-2016 ALIDE2_RS12335 08157a1d3cddd386da77312e3eafa205 611 PRINTS PR00154 AMP-binding signature 187 198 3.1E-5 T 19-04-2016 IPR020459 AMP-binding ALIDE2_RS12335 08157a1d3cddd386da77312e3eafa205 611 PRINTS PR00154 AMP-binding signature 199 207 3.1E-5 T 19-04-2016 IPR020459 AMP-binding ALIDE2_RS12335 08157a1d3cddd386da77312e3eafa205 611 SUPERFAMILY SSF56801 14 295 5.49E-118 T 19-04-2016 ALIDE2_RS12335 08157a1d3cddd386da77312e3eafa205 611 SUPERFAMILY SSF56801 351 609 5.49E-118 T 19-04-2016 ALIDE2_RS12335 08157a1d3cddd386da77312e3eafa205 611 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS12335 08157a1d3cddd386da77312e3eafa205 611 Gene3D G3DSA:3.40.50.980 349 410 8.0E-38 T 19-04-2016 ALIDE2_RS12335 08157a1d3cddd386da77312e3eafa205 611 Gene3D G3DSA:3.40.50.980 199 290 8.0E-38 T 19-04-2016 ALIDE2_RS05900 16a149c7e9765bf791f73e7782d6071d 300 PIRSF PIRSF001365 7 299 1.9E-69 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS05900 16a149c7e9765bf791f73e7782d6071d 300 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 46 63 - T 19-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS05900 16a149c7e9765bf791f73e7782d6071d 300 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 140 170 - T 19-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS05900 16a149c7e9765bf791f73e7782d6071d 300 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 9 292 42.786 T 19-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS05900 16a149c7e9765bf791f73e7782d6071d 300 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 17 286 1.2E-65 T 19-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 ALIDE2_RS05900 16a149c7e9765bf791f73e7782d6071d 300 SMART SM01130 9 293 1.4E-84 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS05900 16a149c7e9765bf791f73e7782d6071d 300 PANTHER PTHR12128:SF34 10 291 5.1E-73 T 19-04-2016 ALIDE2_RS05900 16a149c7e9765bf791f73e7782d6071d 300 Pfam PF00701 Dihydrodipicolinate synthetase family 10 289 3.6E-53 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS05900 16a149c7e9765bf791f73e7782d6071d 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 110 126 3.1E-13 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS05900 16a149c7e9765bf791f73e7782d6071d 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 43 64 3.1E-13 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS05900 16a149c7e9765bf791f73e7782d6071d 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 3.1E-13 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS05900 16a149c7e9765bf791f73e7782d6071d 300 Gene3D G3DSA:3.20.20.70 4 290 5.1E-82 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS05900 16a149c7e9765bf791f73e7782d6071d 300 SUPERFAMILY SSF51569 9 291 6.38E-77 T 19-04-2016 ALIDE2_RS05900 16a149c7e9765bf791f73e7782d6071d 300 PANTHER PTHR12128 10 291 5.1E-73 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS19835 c40148f9d13e3db429c554e977b0dbad 188 PANTHER PTHR30437:SF6 1 188 1.2E-61 T 19-04-2016 ALIDE2_RS19835 c40148f9d13e3db429c554e977b0dbad 188 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 144 160 - T 19-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ALIDE2_RS19835 c40148f9d13e3db429c554e977b0dbad 188 Hamap MF_00930 Transcription elongation factor GreB [greB]. 25 181 50.843 T 19-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 ALIDE2_RS19835 c40148f9d13e3db429c554e977b0dbad 188 Gene3D G3DSA:1.10.287.180 27 99 5.3E-22 T 19-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ALIDE2_RS19835 c40148f9d13e3db429c554e977b0dbad 188 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 107 180 1.9E-24 T 19-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ALIDE2_RS19835 c40148f9d13e3db429c554e977b0dbad 188 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 41 72 - T 19-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ALIDE2_RS19835 c40148f9d13e3db429c554e977b0dbad 188 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 27 181 2.5E-65 T 19-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 ALIDE2_RS19835 c40148f9d13e3db429c554e977b0dbad 188 PANTHER PTHR30437 1 188 1.2E-61 T 19-04-2016 ALIDE2_RS19835 c40148f9d13e3db429c554e977b0dbad 188 Pfam PF03449 Transcription elongation factor, N-terminal 28 98 5.2E-23 T 19-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ALIDE2_RS19835 c40148f9d13e3db429c554e977b0dbad 188 Hamap MF_00105 Transcription elongation factor GreA [greA]. 26 179 26.079 T 19-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 ALIDE2_RS19835 c40148f9d13e3db429c554e977b0dbad 188 SUPERFAMILY SSF54534 106 180 5.62E-20 T 19-04-2016 ALIDE2_RS19835 c40148f9d13e3db429c554e977b0dbad 188 Gene3D G3DSA:3.10.50.30 107 186 1.8E-27 T 19-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ALIDE2_RS19835 c40148f9d13e3db429c554e977b0dbad 188 SUPERFAMILY SSF46557 27 102 1.57E-25 T 19-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ALIDE2_RS19835 c40148f9d13e3db429c554e977b0dbad 188 PIRSF PIRSF006092 25 182 7.5E-42 T 19-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 ALIDE2_RS06610 3f777a37b929d24309f20fafb249f0bd 93 TIGRFAM TIGR00165 S18: ribosomal protein bS18 22 89 2.9E-32 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS06610 3f777a37b929d24309f20fafb249f0bd 93 SUPERFAMILY SSF46911 18 91 7.72E-26 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS06610 3f777a37b929d24309f20fafb249f0bd 93 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 38 90 4.0E-23 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS06610 3f777a37b929d24309f20fafb249f0bd 93 Pfam PF01084 Ribosomal protein S18 35 84 1.6E-22 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS06610 3f777a37b929d24309f20fafb249f0bd 93 PRINTS PR00974 Ribosomal protein S18 family signature 63 77 7.4E-15 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS06610 3f777a37b929d24309f20fafb249f0bd 93 PRINTS PR00974 Ribosomal protein S18 family signature 77 87 7.4E-15 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS06610 3f777a37b929d24309f20fafb249f0bd 93 PRINTS PR00974 Ribosomal protein S18 family signature 45 55 7.4E-15 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS06610 3f777a37b929d24309f20fafb249f0bd 93 PRINTS PR00974 Ribosomal protein S18 family signature 55 62 7.4E-15 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS06610 3f777a37b929d24309f20fafb249f0bd 93 Gene3D G3DSA:4.10.640.10 25 91 1.4E-28 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS06610 3f777a37b929d24309f20fafb249f0bd 93 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 10 90 19.843 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS06610 3f777a37b929d24309f20fafb249f0bd 93 PANTHER PTHR13479 20 93 4.0E-22 T 19-04-2016 ALIDE2_RS04705 60d019dbd36a9aaa85223e02c4ee10ba 209 SUPERFAMILY SSF53178 1 189 1.96E-68 T 19-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ALIDE2_RS04705 60d019dbd36a9aaa85223e02c4ee10ba 209 PANTHER PTHR17224 2 197 4.0E-75 T 19-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ALIDE2_RS04705 60d019dbd36a9aaa85223e02c4ee10ba 209 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 180 34.829 T 19-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ALIDE2_RS04705 60d019dbd36a9aaa85223e02c4ee10ba 209 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 185 3.8E-61 T 19-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ALIDE2_RS04705 60d019dbd36a9aaa85223e02c4ee10ba 209 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 19-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 ALIDE2_RS04705 60d019dbd36a9aaa85223e02c4ee10ba 209 Gene3D G3DSA:3.40.50.1470 1 188 8.7E-71 T 19-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ALIDE2_RS04705 60d019dbd36a9aaa85223e02c4ee10ba 209 PANTHER PTHR17224:SF1 2 197 4.0E-75 T 19-04-2016 ALIDE2_RS04705 60d019dbd36a9aaa85223e02c4ee10ba 209 Pfam PF01195 Peptidyl-tRNA hydrolase 4 184 8.7E-56 T 19-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ALIDE2_RS12395 cb658204a2608c0df0043e8841c68074 335 PIRSF PIRSF017082 4 331 1.8E-71 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12395 cb658204a2608c0df0043e8841c68074 335 PANTHER PTHR30349:SF32 28 329 9.3E-84 T 19-04-2016 ALIDE2_RS12395 cb658204a2608c0df0043e8841c68074 335 SUPERFAMILY SSF53850 121 281 2.06E-11 T 19-04-2016 ALIDE2_RS12395 cb658204a2608c0df0043e8841c68074 335 PANTHER PTHR30349 28 329 9.3E-84 T 19-04-2016 ALIDE2_RS12395 cb658204a2608c0df0043e8841c68074 335 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 328 4.9E-81 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS04700 7adc7c294d55e1176960ed93af5a66e6 85 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS04700 7adc7c294d55e1176960ed93af5a66e6 85 SUPERFAMILY SSF54862 4 76 2.51E-18 T 19-04-2016 ALIDE2_RS04700 7adc7c294d55e1176960ed93af5a66e6 85 Pfam PF13237 4Fe-4S dicluster domain 6 55 4.2E-6 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS04700 7adc7c294d55e1176960ed93af5a66e6 85 Gene3D G3DSA:3.30.70.20 4 75 4.2E-18 T 19-04-2016 ALIDE2_RS04700 7adc7c294d55e1176960ed93af5a66e6 85 PANTHER PTHR24960 1 76 1.8E-27 T 19-04-2016 ALIDE2_RS04700 7adc7c294d55e1176960ed93af5a66e6 85 PANTHER PTHR24960:SF38 1 76 1.8E-27 T 19-04-2016 ALIDE2_RS09690 b3f0456f14a68fb2ab538166ffb1387e 302 SUPERFAMILY SSF52821 212 299 9.69E-15 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS09690 b3f0456f14a68fb2ab538166ffb1387e 302 SMART SM00450 198 297 5.3E-5 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS09690 b3f0456f14a68fb2ab538166ffb1387e 302 PANTHER PTHR11404:SF6 1 211 7.3E-47 T 19-04-2016 ALIDE2_RS09690 b3f0456f14a68fb2ab538166ffb1387e 302 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 191 3.0E-23 T 19-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS09690 b3f0456f14a68fb2ab538166ffb1387e 302 Pfam PF00581 Rhodanese-like domain 213 290 6.9E-5 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS09690 b3f0456f14a68fb2ab538166ffb1387e 302 SUPERFAMILY SSF54719 85 197 2.49E-31 T 19-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS09690 b3f0456f14a68fb2ab538166ffb1387e 302 Gene3D G3DSA:3.40.250.10 212 299 2.3E-11 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS09690 b3f0456f14a68fb2ab538166ffb1387e 302 SUPERFAMILY SSF46609 2 83 4.84E-15 T 19-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS09690 b3f0456f14a68fb2ab538166ffb1387e 302 PANTHER PTHR11404 1 211 7.3E-47 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS17950 d4b85ba7bc2059809507bbcdcabc6bed 243 SMART SM00862 161 237 1.3E-23 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS17950 d4b85ba7bc2059809507bbcdcabc6bed 243 SUPERFAMILY SSF46894 138 239 5.39E-27 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS17950 d4b85ba7bc2059809507bbcdcabc6bed 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 237 2.2E-21 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS17950 d4b85ba7bc2059809507bbcdcabc6bed 243 Gene3D G3DSA:3.40.50.2300 6 130 5.7E-43 T 19-04-2016 ALIDE2_RS17950 d4b85ba7bc2059809507bbcdcabc6bed 243 SUPERFAMILY SSF52172 8 131 1.71E-43 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS17950 d4b85ba7bc2059809507bbcdcabc6bed 243 Gene3D G3DSA:1.10.10.10 139 240 2.9E-30 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17950 d4b85ba7bc2059809507bbcdcabc6bed 243 SMART SM00448 9 120 2.6E-44 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS17950 d4b85ba7bc2059809507bbcdcabc6bed 243 Pfam PF00072 Response regulator receiver domain 11 120 1.9E-32 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS17950 d4b85ba7bc2059809507bbcdcabc6bed 243 PANTHER PTHR26402:SF292 9 240 2.2E-100 T 19-04-2016 ALIDE2_RS17950 d4b85ba7bc2059809507bbcdcabc6bed 243 PANTHER PTHR26402 9 240 2.2E-100 T 19-04-2016 ALIDE2_RS02845 ccbaedbe260812a4ebc3e3abec9a7b84 323 PANTHER PTHR30349 1 276 2.6E-64 T 19-04-2016 ALIDE2_RS02845 ccbaedbe260812a4ebc3e3abec9a7b84 323 PANTHER PTHR30349:SF32 1 276 2.6E-64 T 19-04-2016 ALIDE2_RS02845 ccbaedbe260812a4ebc3e3abec9a7b84 323 PIRSF PIRSF017082 1 323 7.0E-64 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS02845 ccbaedbe260812a4ebc3e3abec9a7b84 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 319 2.3E-66 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS02845 ccbaedbe260812a4ebc3e3abec9a7b84 323 SUPERFAMILY SSF53850 115 286 1.21E-15 T 19-04-2016 ALIDE2_RS14365 db8eec0b4318e5ccb9ae02e0b228b565 247 PIRSF PIRSF037208 3 246 3.1E-88 T 19-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic ALIDE2_RS14365 db8eec0b4318e5ccb9ae02e0b228b565 247 PANTHER PTHR21367 20 242 7.7E-58 T 19-04-2016 IPR030700 Arginine-tRNA-protein transferase ALIDE2_RS14365 db8eec0b4318e5ccb9ae02e0b228b565 247 PANTHER PTHR21367:SF0 20 242 7.7E-58 T 19-04-2016 ALIDE2_RS14365 db8eec0b4318e5ccb9ae02e0b228b565 247 SUPERFAMILY SSF55729 83 244 3.18E-17 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS14365 db8eec0b4318e5ccb9ae02e0b228b565 247 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 3 245 44.779 T 19-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic ALIDE2_RS14365 db8eec0b4318e5ccb9ae02e0b228b565 247 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 110 236 1.8E-35 T 19-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 ALIDE2_RS14365 db8eec0b4318e5ccb9ae02e0b228b565 247 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 20 90 3.3E-19 T 19-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 ALIDE2_RS01180 f7fd2284db7d65175819ca7577d03f9c 204 SUPERFAMILY SSF52833 1 85 2.61E-21 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS01180 f7fd2284db7d65175819ca7577d03f9c 204 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 76 6.2E-15 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ALIDE2_RS01180 f7fd2284db7d65175819ca7577d03f9c 204 Gene3D G3DSA:1.20.1050.10 90 196 8.1E-26 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS01180 f7fd2284db7d65175819ca7577d03f9c 204 Gene3D G3DSA:3.40.30.10 4 89 8.3E-28 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS01180 f7fd2284db7d65175819ca7577d03f9c 204 PANTHER PTHR11260 1 203 8.5E-39 T 19-04-2016 ALIDE2_RS01180 f7fd2284db7d65175819ca7577d03f9c 204 PANTHER PTHR11260:SF178 1 203 8.5E-39 T 19-04-2016 ALIDE2_RS01180 f7fd2284db7d65175819ca7577d03f9c 204 Pfam PF14497 Glutathione S-transferase, C-terminal domain 120 201 6.2E-9 T 19-04-2016 IPR004046 Glutathione S-transferase, C-terminal ALIDE2_RS01180 f7fd2284db7d65175819ca7577d03f9c 204 SUPERFAMILY SSF47616 82 203 1.39E-22 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS19055 8129ad1a100a0af6d45816e57c74f57f 449 PANTHER PTHR11918:SF43 1 438 2.1E-199 T 19-04-2016 ALIDE2_RS19055 8129ad1a100a0af6d45816e57c74f57f 449 Pfam PF01938 TRAM domain 378 438 1.9E-16 T 19-04-2016 IPR002792 TRAM domain ALIDE2_RS19055 8129ad1a100a0af6d45816e57c74f57f 449 Pfam PF00919 Uncharacterized protein family UPF0004 4 102 1.3E-30 T 19-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 ALIDE2_RS19055 8129ad1a100a0af6d45816e57c74f57f 449 Pfam PF04055 Radical SAM superfamily 149 324 1.1E-28 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ALIDE2_RS19055 8129ad1a100a0af6d45816e57c74f57f 449 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 149 169 - T 19-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 ALIDE2_RS19055 8129ad1a100a0af6d45816e57c74f57f 449 SMART SM00729 145 366 4.2E-57 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ALIDE2_RS19055 8129ad1a100a0af6d45816e57c74f57f 449 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 438 4.8E-177 T 19-04-2016 ALIDE2_RS19055 8129ad1a100a0af6d45816e57c74f57f 449 PANTHER PTHR11918 1 438 2.1E-199 T 19-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein ALIDE2_RS19055 8129ad1a100a0af6d45816e57c74f57f 449 SUPERFAMILY SSF102114 122 370 2.09E-58 T 19-04-2016 ALIDE2_RS19055 8129ad1a100a0af6d45816e57c74f57f 449 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 436 1.8E-151 T 19-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 ALIDE2_RS19055 8129ad1a100a0af6d45816e57c74f57f 449 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 439 74.408 T 19-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 ALIDE2_RS19055 8129ad1a100a0af6d45816e57c74f57f 449 Gene3D G3DSA:3.80.30.20 145 377 1.8E-78 T 19-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe ALIDE2_RS14395 54821e9dffdb5b0ef882d1c2ad4e6273 334 PANTHER PTHR10799 191 312 9.5E-26 T 19-04-2016 ALIDE2_RS14395 54821e9dffdb5b0ef882d1c2ad4e6273 334 PANTHER PTHR10799:SF750 191 312 9.5E-26 T 19-04-2016 ALIDE2_RS14395 54821e9dffdb5b0ef882d1c2ad4e6273 334 SMART SM00267 141 313 3.4E-46 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS14395 54821e9dffdb5b0ef882d1c2ad4e6273 334 Gene3D G3DSA:3.30.70.270 154 315 2.5E-51 T 19-04-2016 ALIDE2_RS14395 54821e9dffdb5b0ef882d1c2ad4e6273 334 SUPERFAMILY SSF55073 157 315 1.88E-41 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS14395 54821e9dffdb5b0ef882d1c2ad4e6273 334 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 151 311 8.5E-39 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS14395 54821e9dffdb5b0ef882d1c2ad4e6273 334 Pfam PF00990 Diguanylate cyclase, GGDEF domain 154 309 4.0E-36 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS20195 12149b42e221cd78eebcacba50cf5bd7 76 Pfam PF11534 Hexameric tyrosine-coordinated heme protein (HTHP) 4 75 1.3E-36 T 19-04-2016 IPR021111 Hexameric tyrosine-coordinated heme protein (HTHP) ALIDE2_RS00885 64b46fd733b0361d7cf8d49c8b60d4d8 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 123 6.1E-31 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00885 64b46fd733b0361d7cf8d49c8b60d4d8 382 PANTHER PTHR10909 7 380 8.2E-198 T 19-04-2016 ALIDE2_RS00885 64b46fd733b0361d7cf8d49c8b60d4d8 382 Gene3D G3DSA:1.20.140.10 220 380 1.3E-64 T 19-04-2016 ALIDE2_RS00885 64b46fd733b0361d7cf8d49c8b60d4d8 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 380 4.8E-51 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00885 64b46fd733b0361d7cf8d49c8b60d4d8 382 Gene3D G3DSA:2.40.110.10 127 219 1.9E-37 T 19-04-2016 ALIDE2_RS00885 64b46fd733b0361d7cf8d49c8b60d4d8 382 PANTHER PTHR10909:SF204 7 380 8.2E-198 T 19-04-2016 ALIDE2_RS00885 64b46fd733b0361d7cf8d49c8b60d4d8 382 SUPERFAMILY SSF47203 230 380 1.3E-49 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00885 64b46fd733b0361d7cf8d49c8b60d4d8 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 220 6.9E-25 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS00885 64b46fd733b0361d7cf8d49c8b60d4d8 382 Gene3D G3DSA:1.10.540.10 9 124 1.3E-37 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00885 64b46fd733b0361d7cf8d49c8b60d4d8 382 SUPERFAMILY SSF56645 9 245 3.14E-79 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS01420 1806a487c3771282dada89610fabd586 63 Pfam PF01361 Tautomerase enzyme 2 60 1.6E-24 T 19-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 ALIDE2_RS01420 1806a487c3771282dada89610fabd586 63 Gene3D G3DSA:3.30.429.20 2 61 3.7E-28 T 19-04-2016 ALIDE2_RS01420 1806a487c3771282dada89610fabd586 63 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 61 6.5E-24 T 19-04-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 ALIDE2_RS01420 1806a487c3771282dada89610fabd586 63 SUPERFAMILY SSF55331 2 61 5.24E-21 T 19-04-2016 IPR014347 Tautomerase/MIF superfamily ALIDE2_RS01420 1806a487c3771282dada89610fabd586 63 PANTHER PTHR35530:SF1 1 61 8.9E-17 T 19-04-2016 ALIDE2_RS01420 1806a487c3771282dada89610fabd586 63 PANTHER PTHR35530 1 61 8.9E-17 T 19-04-2016 ALIDE2_RS15210 b279b2f0f9e4326c89cb3953b42fb0e5 324 Pfam PF06067 Domain of unknown function (DUF932) 79 304 3.7E-79 T 19-04-2016 IPR026325 Protein of unknown function DUF932 ALIDE2_RS15210 b279b2f0f9e4326c89cb3953b42fb0e5 324 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 320 3.0E-113 T 19-04-2016 IPR017686 Phage/plasmid-like protein ALIDE2_RS22295 9c9d763dc43a59e660c77d2fd39ab06a 558 Gene3D G3DSA:3.40.50.980 215 383 5.6E-42 T 19-04-2016 ALIDE2_RS22295 9c9d763dc43a59e660c77d2fd39ab06a 558 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS22295 9c9d763dc43a59e660c77d2fd39ab06a 558 PANTHER PTHR24096 175 558 6.7E-167 T 19-04-2016 ALIDE2_RS22295 9c9d763dc43a59e660c77d2fd39ab06a 558 PANTHER PTHR24096 1 155 6.7E-167 T 19-04-2016 ALIDE2_RS22295 9c9d763dc43a59e660c77d2fd39ab06a 558 Gene3D G3DSA:2.30.38.10 384 456 3.3E-26 T 19-04-2016 ALIDE2_RS22295 9c9d763dc43a59e660c77d2fd39ab06a 558 Pfam PF00501 AMP-binding enzyme 32 465 9.7E-105 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS22295 9c9d763dc43a59e660c77d2fd39ab06a 558 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 548 7.9E-17 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS22295 9c9d763dc43a59e660c77d2fd39ab06a 558 SUPERFAMILY SSF56801 18 556 2.09E-150 T 19-04-2016 ALIDE2_RS22295 9c9d763dc43a59e660c77d2fd39ab06a 558 Gene3D G3DSA:3.30.300.30 460 556 1.5E-28 T 19-04-2016 ALIDE2_RS22295 9c9d763dc43a59e660c77d2fd39ab06a 558 Gene3D G3DSA:3.40.50.980 184 214 1.8E-40 T 19-04-2016 ALIDE2_RS22295 9c9d763dc43a59e660c77d2fd39ab06a 558 Gene3D G3DSA:3.40.50.980 24 152 1.8E-40 T 19-04-2016 ALIDE2_RS04250 bdb3b3384b2d254f50b108d0cee4d773 262 Pfam PF00902 Sec-independent protein translocase protein (TatC) 20 232 1.0E-62 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ALIDE2_RS04250 bdb3b3384b2d254f50b108d0cee4d773 262 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 7 259 18.482 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ALIDE2_RS04250 bdb3b3384b2d254f50b108d0cee4d773 262 PANTHER PTHR30371 2 260 5.5E-95 T 19-04-2016 ALIDE2_RS04250 bdb3b3384b2d254f50b108d0cee4d773 262 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 19 237 1.5E-65 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ALIDE2_RS04250 bdb3b3384b2d254f50b108d0cee4d773 262 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 114 140 4.0E-47 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ALIDE2_RS04250 bdb3b3384b2d254f50b108d0cee4d773 262 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 17 44 4.0E-47 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ALIDE2_RS04250 bdb3b3384b2d254f50b108d0cee4d773 262 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 114 4.0E-47 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ALIDE2_RS04250 bdb3b3384b2d254f50b108d0cee4d773 262 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 165 193 4.0E-47 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ALIDE2_RS04250 bdb3b3384b2d254f50b108d0cee4d773 262 PANTHER PTHR30371:SF0 2 260 5.5E-95 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ALIDE2_RS05715 0673302cb12c6d0631c0f819498b9311 395 Pfam PF02515 CoA-transferase family III 6 371 3.8E-118 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS05715 0673302cb12c6d0631c0f819498b9311 395 Gene3D G3DSA:3.40.50.10540 303 395 2.6E-102 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS05715 0673302cb12c6d0631c0f819498b9311 395 Gene3D G3DSA:3.40.50.10540 3 213 2.6E-102 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS05715 0673302cb12c6d0631c0f819498b9311 395 SUPERFAMILY SSF89796 1 395 3.01E-124 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS05715 0673302cb12c6d0631c0f819498b9311 395 Gene3D G3DSA:3.30.1540.10 219 302 2.7E-28 T 19-04-2016 ALIDE2_RS05715 0673302cb12c6d0631c0f819498b9311 395 PANTHER PTHR24023 47 382 1.7E-34 T 19-04-2016 ALIDE2_RS05715 0673302cb12c6d0631c0f819498b9311 395 PANTHER PTHR24023:SF593 47 382 1.7E-34 T 19-04-2016 ALIDE2_RS01475 02ee68e3e7694f2ef17eccbd219f7502 305 PANTHER PTHR10907 1 301 1.6E-73 T 19-04-2016 ALIDE2_RS01475 02ee68e3e7694f2ef17eccbd219f7502 305 PANTHER PTHR10907:SF47 1 301 1.6E-73 T 19-04-2016 ALIDE2_RS01475 02ee68e3e7694f2ef17eccbd219f7502 305 SUPERFAMILY SSF63829 41 302 6.32E-65 T 19-04-2016 ALIDE2_RS01475 02ee68e3e7694f2ef17eccbd219f7502 305 Gene3D G3DSA:2.120.10.30 43 303 6.6E-65 T 19-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like ALIDE2_RS01475 02ee68e3e7694f2ef17eccbd219f7502 305 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 266 284 9.1E-10 T 19-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) ALIDE2_RS01475 02ee68e3e7694f2ef17eccbd219f7502 305 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 162 184 9.1E-10 T 19-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) ALIDE2_RS01475 02ee68e3e7694f2ef17eccbd219f7502 305 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 223 240 9.1E-10 T 19-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) ALIDE2_RS01475 02ee68e3e7694f2ef17eccbd219f7502 305 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 45 283 2.3E-44 T 19-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 Gene3D G3DSA:2.40.50.140 3 109 1.5E-39 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 Pfam PF01336 OB-fold nucleic acid binding domain 20 102 1.4E-17 T 19-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 SUPERFAMILY SSF55261 293 418 7.36E-43 T 19-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 Gene3D G3DSA:3.30.1360.30 279 415 2.8E-46 T 19-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 SUPERFAMILY SSF50249 3 107 3.43E-34 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 PANTHER PTHR22594:SF5 373 579 7.7E-239 T 19-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 PANTHER PTHR22594:SF5 1 299 7.7E-239 T 19-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 590 1.2E-240 T 19-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 3 571 35.605 T 19-04-2016 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 Gene3D G3DSA:3.30.930.10 134 278 9.7E-109 T 19-04-2016 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 Gene3D G3DSA:3.30.930.10 416 592 9.7E-109 T 19-04-2016 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 Pfam PF02938 GAD domain 314 408 5.1E-28 T 19-04-2016 IPR029351 GAD domain ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 482 498 1.67E-26 T 19-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 526 540 1.67E-26 T 19-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 1.67E-26 T 19-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 1.67E-26 T 19-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 PANTHER PTHR22594 373 579 7.7E-239 T 19-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 PANTHER PTHR22594 1 299 7.7E-239 T 19-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 566 2.1E-102 T 19-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 SUPERFAMILY SSF55681 113 294 1.58E-102 T 19-04-2016 ALIDE2_RS04605 d864b6758fd7b1cbfecc901742355367 599 SUPERFAMILY SSF55681 432 593 1.58E-102 T 19-04-2016 ALIDE2_RS02865 d72ad8784bfe269e7c5e470e1d701322 660 Pfam PF01464 Transglycosylase SLT domain 494 595 7.9E-23 T 19-04-2016 IPR008258 Transglycosylase SLT domain 1 ALIDE2_RS02865 d72ad8784bfe269e7c5e470e1d701322 660 SUPERFAMILY SSF48435 28 482 2.35E-107 T 19-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 ALIDE2_RS02865 d72ad8784bfe269e7c5e470e1d701322 660 Gene3D G3DSA:1.10.530.10 480 639 2.6E-49 T 19-04-2016 ALIDE2_RS02865 d72ad8784bfe269e7c5e470e1d701322 660 Gene3D G3DSA:1.25.20.10 29 386 1.3E-94 T 19-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 ALIDE2_RS02865 d72ad8784bfe269e7c5e470e1d701322 660 PANTHER PTHR21666 470 659 9.6E-43 T 19-04-2016 ALIDE2_RS02865 d72ad8784bfe269e7c5e470e1d701322 660 SUPERFAMILY SSF53955 483 642 3.07E-48 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS20905 2ba2cb46e7916be8ce99d502b29b39f8 128 Gene3D G3DSA:3.40.50.2300 4 125 1.3E-37 T 19-04-2016 ALIDE2_RS20905 2ba2cb46e7916be8ce99d502b29b39f8 128 Pfam PF00072 Response regulator receiver domain 8 119 4.9E-32 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20905 2ba2cb46e7916be8ce99d502b29b39f8 128 SMART SM00448 5 119 4.1E-35 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20905 2ba2cb46e7916be8ce99d502b29b39f8 128 SUPERFAMILY SSF52172 5 124 4.13E-35 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS20905 2ba2cb46e7916be8ce99d502b29b39f8 128 PANTHER PTHR26402 5 125 1.4E-42 T 19-04-2016 ALIDE2_RS03455 a627db5bb8078f7ce59b85bf29b40560 288 Pfam PF01522 Polysaccharide deacetylase 10 149 2.5E-19 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ALIDE2_RS03455 a627db5bb8078f7ce59b85bf29b40560 288 PANTHER PTHR10587 42 149 5.6E-26 T 19-04-2016 ALIDE2_RS03455 a627db5bb8078f7ce59b85bf29b40560 288 SUPERFAMILY SSF88713 8 256 1.26E-45 T 19-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ALIDE2_RS03455 a627db5bb8078f7ce59b85bf29b40560 288 TIGRFAM TIGR03006 pepcterm_polyde: polysaccharide deacetylase family protein, PEP-CTERM locus subfamily 9 277 8.2E-135 T 19-04-2016 IPR014344 PEP-CTERM locus, polysaccharide deactylase ALIDE2_RS03455 a627db5bb8078f7ce59b85bf29b40560 288 Pfam PF11959 Domain of unknown function (DUF3473) 151 277 2.7E-51 T 19-04-2016 IPR022560 Domain of unknown function DUF3473 ALIDE2_RS03455 a627db5bb8078f7ce59b85bf29b40560 288 Gene3D G3DSA:3.20.20.370 7 236 1.8E-54 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ALIDE2_RS10580 66d96622eaeb14e2014fdb40b63effbd 433 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 426 2.0E-135 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS10580 66d96622eaeb14e2014fdb40b63effbd 433 PANTHER PTHR11808:SF12 269 430 1.5E-212 T 19-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 ALIDE2_RS10580 66d96622eaeb14e2014fdb40b63effbd 433 PANTHER PTHR11808:SF12 6 239 1.5E-212 T 19-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 ALIDE2_RS10580 66d96622eaeb14e2014fdb40b63effbd 433 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 9 426 4.9E-175 T 19-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 ALIDE2_RS10580 66d96622eaeb14e2014fdb40b63effbd 433 SUPERFAMILY SSF53383 8 426 8.97E-123 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS10580 66d96622eaeb14e2014fdb40b63effbd 433 Gene3D G3DSA:3.90.1150.10 292 428 2.6E-49 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS10580 66d96622eaeb14e2014fdb40b63effbd 433 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS10580 66d96622eaeb14e2014fdb40b63effbd 433 PANTHER PTHR11808 269 430 1.5E-212 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS10580 66d96622eaeb14e2014fdb40b63effbd 433 PANTHER PTHR11808 6 239 1.5E-212 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS10580 66d96622eaeb14e2014fdb40b63effbd 433 PIRSF PIRSF001434 3 429 2.9E-134 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS10580 66d96622eaeb14e2014fdb40b63effbd 433 Gene3D G3DSA:3.40.640.10 8 290 4.9E-113 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS16125 cfd3844342dca9c62974f24ddbfb1047 411 Gene3D G3DSA:3.40.50.2300 156 308 5.6E-27 T 19-04-2016 ALIDE2_RS16125 cfd3844342dca9c62974f24ddbfb1047 411 PANTHER PTHR30483 1 407 1.4E-46 T 19-04-2016 ALIDE2_RS16125 cfd3844342dca9c62974f24ddbfb1047 411 Pfam PF13458 Periplasmic binding protein 27 375 4.4E-66 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS16125 cfd3844342dca9c62974f24ddbfb1047 411 SUPERFAMILY SSF53822 26 377 6.77E-67 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS16125 cfd3844342dca9c62974f24ddbfb1047 411 Gene3D G3DSA:3.40.50.2300 309 362 1.9E-26 T 19-04-2016 ALIDE2_RS16125 cfd3844342dca9c62974f24ddbfb1047 411 Gene3D G3DSA:3.40.50.2300 22 155 1.9E-26 T 19-04-2016 ALIDE2_RS20320 6db005a7d14c8c24dc9f070e9e06d2c2 280 Pfam PF04909 Amidohydrolase 15 279 4.5E-33 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 ALIDE2_RS20320 6db005a7d14c8c24dc9f070e9e06d2c2 280 PANTHER PTHR35563:SF1 10 280 2.6E-59 T 19-04-2016 ALIDE2_RS20320 6db005a7d14c8c24dc9f070e9e06d2c2 280 Gene3D G3DSA:3.20.20.140 7 279 6.5E-86 T 19-04-2016 ALIDE2_RS20320 6db005a7d14c8c24dc9f070e9e06d2c2 280 PANTHER PTHR35563 10 280 2.6E-59 T 19-04-2016 ALIDE2_RS20320 6db005a7d14c8c24dc9f070e9e06d2c2 280 SUPERFAMILY SSF51556 10 279 1.01E-64 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS09255 7e8c10dde94dc0fa271e0bbb578136f1 250 PANTHER PTHR21294:SF8 1 250 8.9E-144 T 19-04-2016 ALIDE2_RS09255 7e8c10dde94dc0fa271e0bbb578136f1 250 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 19-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 ALIDE2_RS09255 7e8c10dde94dc0fa271e0bbb578136f1 250 Pfam PF01012 Electron transfer flavoprotein domain 30 206 1.0E-46 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS09255 7e8c10dde94dc0fa271e0bbb578136f1 250 PIRSF PIRSF000090 1 249 1.8E-81 T 19-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 ALIDE2_RS09255 7e8c10dde94dc0fa271e0bbb578136f1 250 SMART SM00893 23 211 1.1E-60 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS09255 7e8c10dde94dc0fa271e0bbb578136f1 250 SUPERFAMILY SSF52402 2 242 7.67E-81 T 19-04-2016 ALIDE2_RS09255 7e8c10dde94dc0fa271e0bbb578136f1 250 PANTHER PTHR21294 1 250 8.9E-144 T 19-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 ALIDE2_RS09255 7e8c10dde94dc0fa271e0bbb578136f1 250 Gene3D G3DSA:3.40.50.620 2 247 1.4E-98 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS08080 d88928052e1848d9663ff072f11d5381 100 PANTHER PTHR36511:SF3 4 100 1.3E-24 T 19-04-2016 ALIDE2_RS08080 d88928052e1848d9663ff072f11d5381 100 Pfam PF01381 Helix-turn-helix 45 88 2.8E-5 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS08080 d88928052e1848d9663ff072f11d5381 100 PANTHER PTHR36511 4 100 1.3E-24 T 19-04-2016 ALIDE2_RS08080 d88928052e1848d9663ff072f11d5381 100 Gene3D G3DSA:1.10.260.40 44 97 2.9E-18 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS08080 d88928052e1848d9663ff072f11d5381 100 SUPERFAMILY SSF47413 44 97 4.61E-10 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS17010 48ea920aced1e8abbb29c4df75fc7684 210 PANTHER PTHR30309:SF0 2 209 4.2E-67 T 19-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 ALIDE2_RS17010 48ea920aced1e8abbb29c4df75fc7684 210 SMART SM01207 12 198 2.3E-83 T 19-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 ALIDE2_RS17010 48ea920aced1e8abbb29c4df75fc7684 210 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 9 206 20.153 T 19-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 ALIDE2_RS17010 48ea920aced1e8abbb29c4df75fc7684 210 PANTHER PTHR30309 2 209 4.2E-67 T 19-04-2016 ALIDE2_RS17010 48ea920aced1e8abbb29c4df75fc7684 210 Pfam PF02660 Glycerol-3-phosphate acyltransferase 14 197 1.2E-50 T 19-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 ALIDE2_RS17010 48ea920aced1e8abbb29c4df75fc7684 210 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 5 206 7.4E-55 T 19-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 ALIDE2_RS05495 f9c58fdd8405f3e530b6e52929ba437e 571 Pfam PF02272 DHHA1 domain 380 450 1.1E-10 T 19-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 ALIDE2_RS05495 f9c58fdd8405f3e530b6e52929ba437e 571 PANTHER PTHR30255 1 570 1.2E-179 T 19-04-2016 ALIDE2_RS05495 f9c58fdd8405f3e530b6e52929ba437e 571 Pfam PF01368 DHH family 75 200 1.5E-9 T 19-04-2016 IPR001667 DDH domain ALIDE2_RS05495 f9c58fdd8405f3e530b6e52929ba437e 571 SUPERFAMILY SSF64182 47 465 1.83E-111 T 19-04-2016 ALIDE2_RS05495 f9c58fdd8405f3e530b6e52929ba437e 571 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 22 567 1.4E-136 T 19-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 ALIDE2_RS05495 f9c58fdd8405f3e530b6e52929ba437e 571 PANTHER PTHR30255:SF2 1 570 1.2E-179 T 19-04-2016 ALIDE2_RS06740 647a0fef4bb21459eec928db4b1625e5 309 Gene3D G3DSA:3.40.190.10 177 259 5.9E-20 T 19-04-2016 ALIDE2_RS06740 647a0fef4bb21459eec928db4b1625e5 309 Gene3D G3DSA:3.40.190.10 92 176 2.6E-23 T 19-04-2016 ALIDE2_RS06740 647a0fef4bb21459eec928db4b1625e5 309 SUPERFAMILY SSF53850 89 298 1.76E-46 T 19-04-2016 ALIDE2_RS06740 647a0fef4bb21459eec928db4b1625e5 309 SUPERFAMILY SSF46785 4 83 5.2E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06740 647a0fef4bb21459eec928db4b1625e5 309 Gene3D G3DSA:1.10.10.10 4 83 8.9E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06740 647a0fef4bb21459eec928db4b1625e5 309 PANTHER PTHR30537:SF5 1 309 3.5E-114 T 19-04-2016 ALIDE2_RS06740 647a0fef4bb21459eec928db4b1625e5 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.7E-19 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS06740 647a0fef4bb21459eec928db4b1625e5 309 Pfam PF03466 LysR substrate binding domain 88 293 1.1E-44 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS06740 647a0fef4bb21459eec928db4b1625e5 309 PANTHER PTHR30537 1 309 3.5E-114 T 19-04-2016 ALIDE2_RS10965 c4298ca0490c4e7f53f2a411cef66662 202 SUPERFAMILY SSF46785 1 86 1.4E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS10965 c4298ca0490c4e7f53f2a411cef66662 202 Gene3D G3DSA:1.10.10.10 1 85 3.1E-31 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS10965 c4298ca0490c4e7f53f2a411cef66662 202 Pfam PF03466 LysR substrate binding domain 87 185 6.8E-17 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS10965 c4298ca0490c4e7f53f2a411cef66662 202 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.1E-23 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS10965 c4298ca0490c4e7f53f2a411cef66662 202 Gene3D G3DSA:3.40.190.10 90 181 1.2E-17 T 19-04-2016 ALIDE2_RS10965 c4298ca0490c4e7f53f2a411cef66662 202 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.5E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS10965 c4298ca0490c4e7f53f2a411cef66662 202 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.5E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS10965 c4298ca0490c4e7f53f2a411cef66662 202 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.5E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS10965 c4298ca0490c4e7f53f2a411cef66662 202 SUPERFAMILY SSF53850 88 186 1.35E-14 T 19-04-2016 ALIDE2_RS10965 c4298ca0490c4e7f53f2a411cef66662 202 PANTHER PTHR30346 1 184 2.0E-62 T 19-04-2016 ALIDE2_RS15825 0a043e205e7bd4e7edd4fe3f8535e42e 269 SUPERFAMILY SSF51556 2 263 4.81E-83 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS15825 0a043e205e7bd4e7edd4fe3f8535e42e 269 PANTHER PTHR10060:SF20 1 267 7.8E-112 T 19-04-2016 ALIDE2_RS15825 0a043e205e7bd4e7edd4fe3f8535e42e 269 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 263 1.8E-82 T 19-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 ALIDE2_RS15825 0a043e205e7bd4e7edd4fe3f8535e42e 269 PIRSF PIRSF005902 1 266 1.4E-74 T 19-04-2016 IPR001130 TatD family GO:0016788 ALIDE2_RS15825 0a043e205e7bd4e7edd4fe3f8535e42e 269 Pfam PF01026 TatD related DNase 3 263 8.8E-76 T 19-04-2016 IPR001130 TatD family GO:0016788 ALIDE2_RS15825 0a043e205e7bd4e7edd4fe3f8535e42e 269 PANTHER PTHR10060 1 267 7.8E-112 T 19-04-2016 IPR001130 TatD family GO:0016788 ALIDE2_RS15825 0a043e205e7bd4e7edd4fe3f8535e42e 269 Gene3D G3DSA:3.20.20.140 1 263 2.3E-84 T 19-04-2016 ALIDE2_RS15825 0a043e205e7bd4e7edd4fe3f8535e42e 269 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 19-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ALIDE2_RS15825 0a043e205e7bd4e7edd4fe3f8535e42e 269 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 200 216 - T 19-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 23 681 0.0 T 19-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 Gene3D G3DSA:3.40.50.300 296 356 1.2E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 Gene3D G3DSA:3.40.50.300 406 427 1.2E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 Gene3D G3DSA:3.40.50.300 25 107 1.2E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 Hamap MF_00204 UvrABC system protein B [uvrB]. 21 683 43.455 T 19-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 SMART SM00487 27 443 7.4E-30 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 Gene3D G3DSA:3.30.2060.10 177 251 5.3E-12 T 19-04-2016 ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 Pfam PF02151 UvrB/uvrC motif 649 682 1.3E-7 T 19-04-2016 IPR001943 UVR domain GO:0005515 ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 Pfam PF00271 Helicase conserved C-terminal domain 454 562 7.5E-19 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 Pfam PF04851 Type III restriction enzyme, res subunit 34 150 4.1E-9 T 19-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 Gene3D G3DSA:4.10.860.10 643 686 5.8E-17 T 19-04-2016 IPR001943 UVR domain GO:0005515 ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 Gene3D G3DSA:3.40.50.300 436 593 8.8E-39 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 Pfam PF12344 Ultra-violet resistance protein B 569 611 9.5E-21 T 19-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 PANTHER PTHR24029 17 684 0.0 T 19-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 SUPERFAMILY SSF52540 22 432 1.35E-136 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 SMART SM00490 477 563 3.3E-18 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 SUPERFAMILY SSF52540 55 100 4.05E-36 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 SUPERFAMILY SSF52540 476 599 4.05E-36 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11935 5fbdca375459f08c45b2eb6a3254face 695 SUPERFAMILY SSF46600 638 684 2.48E-11 T 19-04-2016 IPR001943 UVR domain GO:0005515 ALIDE2_RS22045 36fa8a5054775fe2db76233432d3bd5a 255 PANTHER PTHR11907:SF10 1 251 3.1E-101 T 19-04-2016 ALIDE2_RS22045 36fa8a5054775fe2db76233432d3bd5a 255 SUPERFAMILY SSF56235 2 252 2.54E-48 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS22045 36fa8a5054775fe2db76233432d3bd5a 255 PANTHER PTHR11907 1 251 3.1E-101 T 19-04-2016 ALIDE2_RS22045 36fa8a5054775fe2db76233432d3bd5a 255 Pfam PF13230 Glutamine amidotransferases class-II 1 253 7.6E-120 T 19-04-2016 IPR026869 Putative glutamine amidotransferase type 2 ALIDE2_RS22045 36fa8a5054775fe2db76233432d3bd5a 255 Gene3D G3DSA:3.60.20.10 1 251 5.1E-69 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS17980 f5f575d85f99c3d73c132638936b3fbc 724 Gene3D G3DSA:3.40.50.720 329 420 4.3E-7 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS17980 f5f575d85f99c3d73c132638936b3fbc 724 SUPERFAMILY SSF56784 8 219 7.05E-44 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS17980 f5f575d85f99c3d73c132638936b3fbc 724 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 192 1.7E-28 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS17980 f5f575d85f99c3d73c132638936b3fbc 724 SUPERFAMILY SSF48179 514 706 2.96E-20 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS17980 f5f575d85f99c3d73c132638936b3fbc 724 Gene3D G3DSA:1.10.1040.10 513 679 5.3E-28 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS17980 f5f575d85f99c3d73c132638936b3fbc 724 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 5.9E-9 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS17980 f5f575d85f99c3d73c132638936b3fbc 724 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 182 195 5.9E-9 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS17980 f5f575d85f99c3d73c132638936b3fbc 724 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 5.9E-9 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS17980 f5f575d85f99c3d73c132638936b3fbc 724 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 5.9E-9 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS17980 f5f575d85f99c3d73c132638936b3fbc 724 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 5.9E-9 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS17980 f5f575d85f99c3d73c132638936b3fbc 724 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 508 643 7.0E-13 T 19-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 ALIDE2_RS17980 f5f575d85f99c3d73c132638936b3fbc 724 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 61 193 2.6E-18 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS17980 f5f575d85f99c3d73c132638936b3fbc 724 Gene3D G3DSA:3.40.50.1000 71 230 1.2E-39 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS17980 f5f575d85f99c3d73c132638936b3fbc 724 PANTHER PTHR18901 9 195 1.2E-49 T 19-04-2016 ALIDE2_RS12675 5b74fab664477b04339e47c1a4246965 962 PANTHER PTHR11773:SF1 8 958 0.0 T 19-04-2016 ALIDE2_RS12675 5b74fab664477b04339e47c1a4246965 962 PANTHER PTHR11773 8 958 0.0 T 19-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 ALIDE2_RS12675 5b74fab664477b04339e47c1a4246965 962 Gene3D G3DSA:3.40.640.10 509 750 1.5E-39 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS12675 5b74fab664477b04339e47c1a4246965 962 Gene3D G3DSA:3.40.640.10 89 310 1.5E-18 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS12675 5b74fab664477b04339e47c1a4246965 962 SUPERFAMILY SSF53383 934 956 1.07E-94 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS12675 5b74fab664477b04339e47c1a4246965 962 SUPERFAMILY SSF53383 482 891 1.07E-94 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS12675 5b74fab664477b04339e47c1a4246965 962 Pfam PF02347 Glycine cleavage system P-protein 457 742 3.1E-11 T 19-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 ALIDE2_RS12675 5b74fab664477b04339e47c1a4246965 962 Pfam PF02347 Glycine cleavage system P-protein 19 447 9.2E-170 T 19-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 ALIDE2_RS12675 5b74fab664477b04339e47c1a4246965 962 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 19 955 0.0 T 19-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 ALIDE2_RS12675 5b74fab664477b04339e47c1a4246965 962 SUPERFAMILY SSF53383 19 448 7.06E-104 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS12675 5b74fab664477b04339e47c1a4246965 962 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 10 961 24.795 T 19-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 Pfam PF02272 DHHA1 domain 799 865 1.6E-13 T 19-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 PANTHER PTHR11777:SF9 1 873 0.0 T 19-04-2016 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 SMART SM00863 652 694 7.7E-19 T 19-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 SUPERFAMILY SSF55186 551 706 2.35E-46 T 19-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 694 1.2E-15 T 19-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 9 852 1.3E-299 T 19-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 Gene3D G3DSA:3.30.930.10 6 251 3.2E-120 T 19-04-2016 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 Pfam PF01411 tRNA synthetases class II (A) 9 553 1.8E-214 T 19-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 SUPERFAMILY SSF101353 256 446 1.06E-57 T 19-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 SUPERFAMILY SSF55681 6 255 2.98E-106 T 19-04-2016 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 SUPERFAMILY SSF50447 454 551 9.42E-19 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 1.6E-30 T 19-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 1.6E-30 T 19-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 1.6E-30 T 19-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 78 89 1.6E-30 T 19-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 1.6E-30 T 19-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 PANTHER PTHR11777 1 873 0.0 T 19-04-2016 ALIDE2_RS14400 da9f40a3106c7f2e498a9a31ba118755 873 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 873 197.206 T 19-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 ALIDE2_RS14015 d06f086da6b46ae92c0a732a65622b28 285 PANTHER PTHR24260 59 271 2.4E-52 T 19-04-2016 ALIDE2_RS14015 d06f086da6b46ae92c0a732a65622b28 285 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 130 144 9.7E-15 T 19-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 ALIDE2_RS14015 d06f086da6b46ae92c0a732a65622b28 285 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 70 85 9.7E-15 T 19-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 ALIDE2_RS14015 d06f086da6b46ae92c0a732a65622b28 285 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 219 231 9.7E-15 T 19-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 ALIDE2_RS14015 d06f086da6b46ae92c0a732a65622b28 285 Pfam PF00089 Trypsin 49 269 3.4E-41 T 19-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 ALIDE2_RS14015 d06f086da6b46ae92c0a732a65622b28 285 Gene3D G3DSA:2.40.10.10 51 77 6.4E-11 T 19-04-2016 ALIDE2_RS14015 d06f086da6b46ae92c0a732a65622b28 285 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 220 231 - T 19-04-2016 IPR033116 Serine proteases, trypsin family, serine active site ALIDE2_RS14015 d06f086da6b46ae92c0a732a65622b28 285 SUPERFAMILY SSF50494 15 272 8.27E-53 T 19-04-2016 IPR009003 Peptidase S1, PA clan ALIDE2_RS14015 d06f086da6b46ae92c0a732a65622b28 285 Gene3D G3DSA:2.40.10.10 78 271 6.7E-44 T 19-04-2016 ALIDE2_RS14015 d06f086da6b46ae92c0a732a65622b28 285 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 80 85 - T 19-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 ALIDE2_RS14015 d06f086da6b46ae92c0a732a65622b28 285 SMART SM00020 39 269 5.3E-47 T 19-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 ALIDE2_RS13320 c5d86423472af546f2ee02e19184b1f9 597 SUPERFAMILY SSF55785 16 134 1.47E-12 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS13320 c5d86423472af546f2ee02e19184b1f9 597 SUPERFAMILY SSF55073 175 332 2.51E-53 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS13320 c5d86423472af546f2ee02e19184b1f9 597 PANTHER PTHR10799 128 440 1.2E-98 T 19-04-2016 ALIDE2_RS13320 c5d86423472af546f2ee02e19184b1f9 597 Pfam PF13426 PAS domain 34 134 1.7E-6 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS13320 c5d86423472af546f2ee02e19184b1f9 597 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 168 328 1.2E-46 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS13320 c5d86423472af546f2ee02e19184b1f9 597 Gene3D G3DSA:3.20.20.450 343 589 2.9E-105 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS13320 c5d86423472af546f2ee02e19184b1f9 597 PANTHER PTHR10799:SF774 128 440 1.2E-98 T 19-04-2016 ALIDE2_RS13320 c5d86423472af546f2ee02e19184b1f9 597 Gene3D G3DSA:3.30.70.270 172 337 2.2E-62 T 19-04-2016 ALIDE2_RS13320 c5d86423472af546f2ee02e19184b1f9 597 Pfam PF00990 Diguanylate cyclase, GGDEF domain 170 326 6.7E-51 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS13320 c5d86423472af546f2ee02e19184b1f9 597 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 141 4.3E-9 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS13320 c5d86423472af546f2ee02e19184b1f9 597 Gene3D G3DSA:3.30.450.20 17 134 2.0E-14 T 19-04-2016 ALIDE2_RS13320 c5d86423472af546f2ee02e19184b1f9 597 Pfam PF00563 EAL domain 346 581 1.0E-79 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS13320 c5d86423472af546f2ee02e19184b1f9 597 SMART SM00052 340 586 4.5E-128 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS13320 c5d86423472af546f2ee02e19184b1f9 597 SMART SM00267 159 330 2.0E-68 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS13320 c5d86423472af546f2ee02e19184b1f9 597 SUPERFAMILY SSF141868 346 590 2.22E-95 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS08975 dbf6ae1ba7a6de2ec92f671fe13a5fb7 136 Pfam PF11990 Protein of unknown function (DUF3487) 13 130 1.8E-43 T 19-04-2016 IPR021877 Protein of unknown function DUF3487 ALIDE2_RS08975 dbf6ae1ba7a6de2ec92f671fe13a5fb7 136 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 14 129 3.1E-44 T 19-04-2016 IPR021877 Protein of unknown function DUF3487 ALIDE2_RS20000 316a4adf9dd7a7bb0195627bda36ff2e 809 PANTHER PTHR11908:SF66 42 808 0.0 T 19-04-2016 ALIDE2_RS20000 316a4adf9dd7a7bb0195627bda36ff2e 809 Gene3D G3DSA:3.30.365.10 493 661 1.2E-54 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS20000 316a4adf9dd7a7bb0195627bda36ff2e 809 SMART SM01008 56 163 2.3E-41 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ALIDE2_RS20000 316a4adf9dd7a7bb0195627bda36ff2e 809 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 199 736 1.6E-194 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS20000 316a4adf9dd7a7bb0195627bda36ff2e 809 SUPERFAMILY SSF56003 165 804 3.4E-195 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS20000 316a4adf9dd7a7bb0195627bda36ff2e 809 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 56 155 2.0E-21 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ALIDE2_RS20000 316a4adf9dd7a7bb0195627bda36ff2e 809 Gene3D G3DSA:3.90.1170.50 42 155 2.8E-38 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ALIDE2_RS20000 316a4adf9dd7a7bb0195627bda36ff2e 809 SUPERFAMILY SSF54665 40 155 3.53E-36 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ALIDE2_RS20000 316a4adf9dd7a7bb0195627bda36ff2e 809 Gene3D G3DSA:3.30.365.10 392 492 7.4E-87 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS20000 316a4adf9dd7a7bb0195627bda36ff2e 809 Gene3D G3DSA:3.30.365.10 662 804 7.4E-87 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS20000 316a4adf9dd7a7bb0195627bda36ff2e 809 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 42 807 0.0 T 19-04-2016 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 ALIDE2_RS20000 316a4adf9dd7a7bb0195627bda36ff2e 809 Gene3D G3DSA:3.30.365.10 220 314 3.6E-31 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS20000 316a4adf9dd7a7bb0195627bda36ff2e 809 PANTHER PTHR11908 42 808 0.0 T 19-04-2016 ALIDE2_RS20000 316a4adf9dd7a7bb0195627bda36ff2e 809 Gene3D G3DSA:3.30.365.10 166 219 1.7E-18 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS20000 316a4adf9dd7a7bb0195627bda36ff2e 809 Gene3D G3DSA:3.30.365.10 316 391 1.7E-18 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS14405 1db7ca8b67f9692d5da80c43be68a1c9 304 SUPERFAMILY SSF51569 5 290 2.72E-80 T 19-04-2016 ALIDE2_RS14405 1db7ca8b67f9692d5da80c43be68a1c9 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 4.0E-13 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS14405 1db7ca8b67f9692d5da80c43be68a1c9 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 4.0E-13 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS14405 1db7ca8b67f9692d5da80c43be68a1c9 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 4.0E-13 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS14405 1db7ca8b67f9692d5da80c43be68a1c9 304 PANTHER PTHR12128 1 304 2.1E-72 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS14405 1db7ca8b67f9692d5da80c43be68a1c9 304 PIRSF PIRSF001365 1 301 7.9E-75 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS14405 1db7ca8b67f9692d5da80c43be68a1c9 304 SMART SM01130 5 293 1.7E-80 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS14405 1db7ca8b67f9692d5da80c43be68a1c9 304 Gene3D G3DSA:3.20.20.70 3 291 1.7E-85 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS14405 1db7ca8b67f9692d5da80c43be68a1c9 304 PANTHER PTHR12128:SF15 1 304 2.1E-72 T 19-04-2016 ALIDE2_RS14405 1db7ca8b67f9692d5da80c43be68a1c9 304 Pfam PF00701 Dihydrodipicolinate synthetase family 7 283 3.0E-50 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ALIDE2_RS13305 1291e24b8f69b909446066cbeae1cc6a 153 SUPERFAMILY SSF53254 3 137 9.03E-22 T 19-04-2016 IPR029033 Histidine phosphatase superfamily ALIDE2_RS13305 1291e24b8f69b909446066cbeae1cc6a 153 Gene3D G3DSA:3.40.50.1240 1 153 2.6E-30 T 19-04-2016 IPR029033 Histidine phosphatase superfamily ALIDE2_RS13305 1291e24b8f69b909446066cbeae1cc6a 153 SMART SM00855 2 109 2.2E-9 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ALIDE2_RS13305 1291e24b8f69b909446066cbeae1cc6a 153 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 77 3.7E-10 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 PANTHER PTHR24322 11 139 2.7E-55 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 PANTHER PTHR24322 155 187 2.7E-55 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 190 1.1E-4 T 19-04-2016 ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 TIGRFAM TIGR03206 benzo_BadH: 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase 4 253 3.8E-132 T 19-04-2016 IPR017619 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.4E-40 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.4E-40 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.4E-40 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.4E-40 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-40 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.4E-40 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 SUPERFAMILY SSF51735 1 254 5.49E-83 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 252 5.5E-66 T 19-04-2016 ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.6E-10 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.6E-10 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.6E-10 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS20335 0053bf766995345f58726561fdda0533 255 Gene3D G3DSA:3.40.50.720 2 253 2.4E-87 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11480 16f0df9f90435c256cd6e88630419192 260 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 260 84.511 T 19-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 ALIDE2_RS11480 16f0df9f90435c256cd6e88630419192 260 PANTHER PTHR34990 5 234 1.4E-53 T 19-04-2016 ALIDE2_RS11480 16f0df9f90435c256cd6e88630419192 260 PANTHER PTHR34990:SF1 5 234 1.4E-53 T 19-04-2016 ALIDE2_RS11480 16f0df9f90435c256cd6e88630419192 260 SUPERFAMILY SSF56300 20 232 3.97E-22 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS11480 16f0df9f90435c256cd6e88630419192 260 Gene3D G3DSA:3.60.21.10 190 218 7.7E-14 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS11480 16f0df9f90435c256cd6e88630419192 260 Gene3D G3DSA:3.60.21.10 21 142 7.7E-14 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS11480 16f0df9f90435c256cd6e88630419192 260 Pfam PF00149 Calcineurin-like phosphoesterase 19 215 1.7E-8 T 19-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 ALIDE2_RS04685 9fcc779fe796e2819001f1268f4b9329 324 PANTHER PTHR24220 5 324 3.6E-134 T 19-04-2016 ALIDE2_RS04685 9fcc779fe796e2819001f1268f4b9329 324 PANTHER PTHR24220:SF586 5 324 3.6E-134 T 19-04-2016 ALIDE2_RS04685 9fcc779fe796e2819001f1268f4b9329 324 Pfam PF00005 ABC transporter 24 180 1.5E-25 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS04685 9fcc779fe796e2819001f1268f4b9329 324 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS04685 9fcc779fe796e2819001f1268f4b9329 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 318 6.8E-20 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS04685 9fcc779fe796e2819001f1268f4b9329 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 299 9.4E-15 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS04685 9fcc779fe796e2819001f1268f4b9329 324 SUPERFAMILY SSF52540 3 251 3.51E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04685 9fcc779fe796e2819001f1268f4b9329 324 Gene3D G3DSA:3.40.50.300 2 253 1.3E-71 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04685 9fcc779fe796e2819001f1268f4b9329 324 SMART SM00382 32 230 2.1E-16 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS06450 caa2bc07bb246697bd6ac46139537831 200 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 114 148 3.0E-6 T 19-04-2016 IPR001451 Hexapeptide repeat ALIDE2_RS06450 caa2bc07bb246697bd6ac46139537831 200 PANTHER PTHR23416:SF23 1 164 1.5E-13 T 19-04-2016 ALIDE2_RS06450 caa2bc07bb246697bd6ac46139537831 200 Gene3D G3DSA:2.160.10.10 34 169 1.1E-24 T 19-04-2016 ALIDE2_RS06450 caa2bc07bb246697bd6ac46139537831 200 SUPERFAMILY SSF51161 12 170 3.88E-24 T 19-04-2016 IPR011004 Trimeric LpxA-like ALIDE2_RS06450 caa2bc07bb246697bd6ac46139537831 200 PANTHER PTHR23416 1 164 1.5E-13 T 19-04-2016 ALIDE2_RS05980 8f7ed82285a2629379eae13cf2c5a091 213 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 10 143 2.6E-22 T 19-04-2016 IPR013362 Pilus modification type IV, PilV ALIDE2_RS05980 8f7ed82285a2629379eae13cf2c5a091 213 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS15400 f7786a4e9f0253e97e19a8a12e65d1fd 158 Pfam PF06347 Bacterial SH3 domain 40 93 1.3E-10 T 19-04-2016 IPR010466 Protein of unknown function DUF1058 ALIDE2_RS15400 f7786a4e9f0253e97e19a8a12e65d1fd 158 Pfam PF08239 Bacterial SH3 domain 106 153 5.8E-12 T 19-04-2016 IPR003646 SH3-like domain, bacterial-type ALIDE2_RS15400 f7786a4e9f0253e97e19a8a12e65d1fd 158 SMART SM00287 34 97 0.1 T 19-04-2016 IPR003646 SH3-like domain, bacterial-type ALIDE2_RS15400 f7786a4e9f0253e97e19a8a12e65d1fd 158 SMART SM00287 99 158 6.8E-6 T 19-04-2016 IPR003646 SH3-like domain, bacterial-type ALIDE2_RS06130 d8bcb173494aa9adc1d486d564eb1bbb 330 PANTHER PTHR30349 6 295 2.7E-99 T 19-04-2016 ALIDE2_RS06130 d8bcb173494aa9adc1d486d564eb1bbb 330 PANTHER PTHR30349:SF16 6 295 2.7E-99 T 19-04-2016 ALIDE2_RS06130 d8bcb173494aa9adc1d486d564eb1bbb 330 PIRSF PIRSF017082 1 330 6.2E-83 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS06130 d8bcb173494aa9adc1d486d564eb1bbb 330 SUPERFAMILY SSF53850 118 293 3.26E-11 T 19-04-2016 ALIDE2_RS06130 d8bcb173494aa9adc1d486d564eb1bbb 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 326 5.3E-93 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS19265 284a278c189b4ac50591d527ea067903 175 Pfam PF01584 CheW-like domain 32 166 2.9E-15 T 19-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ALIDE2_RS19265 284a278c189b4ac50591d527ea067903 175 SMART SM00260 26 165 4.3E-5 T 19-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ALIDE2_RS19265 284a278c189b4ac50591d527ea067903 175 SUPERFAMILY SSF50341 25 170 6.41E-19 T 19-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ALIDE2_RS08155 9ba74c433f296ae00864d66361bd5d83 509 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS08155 9ba74c433f296ae00864d66361bd5d83 509 Gene3D G3DSA:3.40.50.980 171 313 7.7E-26 T 19-04-2016 ALIDE2_RS08155 9ba74c433f296ae00864d66361bd5d83 509 SUPERFAMILY SSF56801 9 507 2.62E-123 T 19-04-2016 ALIDE2_RS08155 9ba74c433f296ae00864d66361bd5d83 509 Gene3D G3DSA:2.30.38.10 339 406 4.3E-18 T 19-04-2016 ALIDE2_RS08155 9ba74c433f296ae00864d66361bd5d83 509 Gene3D G3DSA:3.40.50.980 11 170 1.3E-37 T 19-04-2016 ALIDE2_RS08155 9ba74c433f296ae00864d66361bd5d83 509 Gene3D G3DSA:3.30.300.30 407 506 6.4E-30 T 19-04-2016 ALIDE2_RS08155 9ba74c433f296ae00864d66361bd5d83 509 Pfam PF13193 AMP-binding enzyme C-terminal domain 421 497 2.5E-17 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS08155 9ba74c433f296ae00864d66361bd5d83 509 Pfam PF00501 AMP-binding enzyme 18 412 3.9E-73 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS08155 9ba74c433f296ae00864d66361bd5d83 509 PANTHER PTHR24096 10 502 4.0E-109 T 19-04-2016 ALIDE2_RS06230 5c45d6c0a9e7d767532b31ce19e93db2 284 PANTHER PTHR10869 97 283 1.7E-72 T 19-04-2016 ALIDE2_RS06230 5c45d6c0a9e7d767532b31ce19e93db2 284 SMART SM00702 97 279 2.1E-44 T 19-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 ALIDE2_RS06230 5c45d6c0a9e7d767532b31ce19e93db2 284 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 177 279 8.3E-18 T 19-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ALIDE2_RS23270 856280201cd1c35ccd0011494eea489f 505 PANTHER PTHR11699:SF188 10 489 2.0E-300 T 19-04-2016 ALIDE2_RS23270 856280201cd1c35ccd0011494eea489f 505 SUPERFAMILY SSF53720 6 489 6.54E-147 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS23270 856280201cd1c35ccd0011494eea489f 505 Gene3D G3DSA:3.40.605.10 10 266 6.6E-88 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS23270 856280201cd1c35ccd0011494eea489f 505 Pfam PF00171 Aldehyde dehydrogenase family 23 484 1.6E-136 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS23270 856280201cd1c35ccd0011494eea489f 505 Gene3D G3DSA:3.40.309.10 267 449 1.9E-63 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS23270 856280201cd1c35ccd0011494eea489f 505 PANTHER PTHR11699 10 489 2.0E-300 T 19-04-2016 ALIDE2_RS23270 856280201cd1c35ccd0011494eea489f 505 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 13 488 3.6E-197 T 19-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 ALIDE2_RS02355 66f8e69f3afd89cda2e0e92eeb42714b 216 PANTHER PTHR23026:SF107 19 206 1.4E-30 T 19-04-2016 ALIDE2_RS02355 66f8e69f3afd89cda2e0e92eeb42714b 216 PANTHER PTHR23026 19 206 1.4E-30 T 19-04-2016 ALIDE2_RS02355 66f8e69f3afd89cda2e0e92eeb42714b 216 Gene3D G3DSA:3.40.109.10 20 194 1.1E-32 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 ALIDE2_RS02355 66f8e69f3afd89cda2e0e92eeb42714b 216 PIRSF PIRSF000232 12 201 4.1E-55 T 19-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- ALIDE2_RS02355 66f8e69f3afd89cda2e0e92eeb42714b 216 Pfam PF00881 Nitroreductase family 34 179 8.4E-27 T 19-04-2016 IPR029479 Nitroreductase ALIDE2_RS02355 66f8e69f3afd89cda2e0e92eeb42714b 216 SUPERFAMILY SSF55469 34 197 2.22E-28 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 ALIDE2_RS04855 5804a12dbe4eb59caa47fe5cc462ca5f 355 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 71 85 - T 19-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS04855 5804a12dbe4eb59caa47fe5cc462ca5f 355 Gene3D G3DSA:3.90.180.10 7 182 3.5E-49 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS04855 5804a12dbe4eb59caa47fe5cc462ca5f 355 PANTHER PTHR11695:SF553 13 352 8.3E-105 T 19-04-2016 ALIDE2_RS04855 5804a12dbe4eb59caa47fe5cc462ca5f 355 Pfam PF00107 Zinc-binding dehydrogenase 187 313 1.4E-27 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ALIDE2_RS04855 5804a12dbe4eb59caa47fe5cc462ca5f 355 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 139 1.0E-31 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ALIDE2_RS04855 5804a12dbe4eb59caa47fe5cc462ca5f 355 SUPERFAMILY SSF50129 6 192 2.28E-43 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS04855 5804a12dbe4eb59caa47fe5cc462ca5f 355 Gene3D G3DSA:3.40.50.720 183 299 1.5E-26 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04855 5804a12dbe4eb59caa47fe5cc462ca5f 355 SUPERFAMILY SSF51735 148 318 4.05E-36 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04855 5804a12dbe4eb59caa47fe5cc462ca5f 355 SMART SM00829 10 349 2.1E-8 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ALIDE2_RS04855 5804a12dbe4eb59caa47fe5cc462ca5f 355 PANTHER PTHR11695 13 352 8.3E-105 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 637 34.41 T 19-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 7.3E-53 T 19-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 7.3E-53 T 19-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 7.3E-53 T 19-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 7.3E-53 T 19-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 7.3E-53 T 19-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 PANTHER PTHR11451 1 639 0.0 T 19-04-2016 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 SUPERFAMILY SSF81271 3 61 2.22E-14 T 19-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 SMART SM00863 169 218 1.2E-23 T 19-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 Gene3D G3DSA:3.30.54.20 130 186 2.9E-21 T 19-04-2016 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 PANTHER PTHR11451:SF31 1 639 0.0 T 19-04-2016 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 Gene3D G3DSA:3.30.980.10 187 223 4.3E-42 T 19-04-2016 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 Gene3D G3DSA:3.30.980.10 66 129 4.3E-42 T 19-04-2016 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 528 2.6E-42 T 19-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 Gene3D G3DSA:3.30.930.10 241 529 3.9E-123 T 19-04-2016 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 Pfam PF03129 Anticodon binding domain 540 632 2.6E-16 T 19-04-2016 IPR004154 Anticodon-binding ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 Gene3D G3DSA:3.10.20.30 1 64 3.2E-21 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 SUPERFAMILY SSF52954 529 636 7.25E-28 T 19-04-2016 IPR004154 Anticodon-binding ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 Gene3D G3DSA:3.40.50.800 530 637 7.2E-31 T 19-04-2016 IPR004154 Anticodon-binding ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 1.6E-12 T 19-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 633 2.5E-217 T 19-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 SUPERFAMILY SSF55186 63 240 2.35E-68 T 19-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 Pfam PF02824 TGS domain 3 61 1.8E-8 T 19-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 ALIDE2_RS14060 1d5939bd10dd522f55643cf48c7a9b3d 639 SUPERFAMILY SSF55681 242 525 2.87E-102 T 19-04-2016 ALIDE2_RS23175 532041206d4c43a5b3f0810f953236fd 446 Gene3D G3DSA:3.30.1540.10 274 355 6.3E-26 T 19-04-2016 ALIDE2_RS23175 532041206d4c43a5b3f0810f953236fd 446 PANTHER PTHR24023 118 433 3.7E-21 T 19-04-2016 ALIDE2_RS23175 532041206d4c43a5b3f0810f953236fd 446 Pfam PF02515 CoA-transferase family III 54 423 1.1E-105 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS23175 532041206d4c43a5b3f0810f953236fd 446 Gene3D G3DSA:3.40.50.10540 51 266 5.0E-93 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS23175 532041206d4c43a5b3f0810f953236fd 446 Gene3D G3DSA:3.40.50.10540 356 446 5.0E-93 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS23175 532041206d4c43a5b3f0810f953236fd 446 SUPERFAMILY SSF89796 52 446 2.22E-114 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS23175 532041206d4c43a5b3f0810f953236fd 446 PANTHER PTHR24023:SF593 118 433 3.7E-21 T 19-04-2016 ALIDE2_RS01205 575590318cf6e6f47309af197126a59f 312 PANTHER PTHR11825:SF7 15 311 1.7E-117 T 19-04-2016 ALIDE2_RS01205 575590318cf6e6f47309af197126a59f 312 Gene3D G3DSA:3.20.10.10 139 301 9.4E-57 T 19-04-2016 ALIDE2_RS01205 575590318cf6e6f47309af197126a59f 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 16 312 4.1E-136 T 19-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 ALIDE2_RS01205 575590318cf6e6f47309af197126a59f 312 Pfam PF01063 Amino-transferase class IV 41 272 2.5E-57 T 19-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 ALIDE2_RS01205 575590318cf6e6f47309af197126a59f 312 SUPERFAMILY SSF56752 8 309 2.62E-104 T 19-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 ALIDE2_RS01205 575590318cf6e6f47309af197126a59f 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 199 228 - T 19-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 ALIDE2_RS01205 575590318cf6e6f47309af197126a59f 312 Gene3D G3DSA:3.30.470.10 13 135 3.6E-42 T 19-04-2016 ALIDE2_RS01205 575590318cf6e6f47309af197126a59f 312 PANTHER PTHR11825 15 311 1.7E-117 T 19-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 ALIDE2_RS11605 18245e7b5f8a697831c16078d61c86a9 470 Gene3D G3DSA:3.30.70.20 212 300 7.1E-11 T 19-04-2016 ALIDE2_RS11605 18245e7b5f8a697831c16078d61c86a9 470 PANTHER PTHR24960:SF45 1 391 3.3E-123 T 19-04-2016 ALIDE2_RS11605 18245e7b5f8a697831c16078d61c86a9 470 Pfam PF13746 4Fe-4S dicluster domain 213 315 6.8E-41 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS11605 18245e7b5f8a697831c16078d61c86a9 470 SUPERFAMILY SSF54862 101 123 1.05E-30 T 19-04-2016 ALIDE2_RS11605 18245e7b5f8a697831c16078d61c86a9 470 SUPERFAMILY SSF54862 169 361 1.05E-30 T 19-04-2016 ALIDE2_RS11605 18245e7b5f8a697831c16078d61c86a9 470 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 37 455 1.4E-146 T 19-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 ALIDE2_RS11605 18245e7b5f8a697831c16078d61c86a9 470 Pfam PF12801 4Fe-4S binding domain 93 133 3.2E-10 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS11605 18245e7b5f8a697831c16078d61c86a9 470 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 352 469 3.7E-28 T 19-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain ALIDE2_RS11605 18245e7b5f8a697831c16078d61c86a9 470 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 264 275 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS11605 18245e7b5f8a697831c16078d61c86a9 470 PANTHER PTHR24960 1 391 3.3E-123 T 19-04-2016 ALIDE2_RS11605 18245e7b5f8a697831c16078d61c86a9 470 Gene3D G3DSA:2.60.40.10 352 470 7.3E-34 T 19-04-2016 IPR013783 Immunoglobulin-like fold ALIDE2_RS06545 eed978496b045c3d6098bce86de89ad4 494 PANTHER PTHR30108:SF1 1 494 1.0E-234 T 19-04-2016 ALIDE2_RS06545 eed978496b045c3d6098bce86de89ad4 494 Gene3D G3DSA:3.40.1670.10 344 461 8.1E-52 T 19-04-2016 ALIDE2_RS06545 eed978496b045c3d6098bce86de89ad4 494 Gene3D G3DSA:1.20.5.570 462 494 2.9E-14 T 19-04-2016 ALIDE2_RS06545 eed978496b045c3d6098bce86de89ad4 494 SUPERFAMILY SSF143968 330 493 2.48E-64 T 19-04-2016 ALIDE2_RS06545 eed978496b045c3d6098bce86de89ad4 494 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 462 3.5E-154 T 19-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 ALIDE2_RS06545 eed978496b045c3d6098bce86de89ad4 494 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 438 2.5E-162 T 19-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 ALIDE2_RS06545 eed978496b045c3d6098bce86de89ad4 494 PANTHER PTHR30108 1 494 1.0E-234 T 19-04-2016 ALIDE2_RS06545 eed978496b045c3d6098bce86de89ad4 494 SUPERFAMILY SSF50475 3 329 2.2E-114 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 ALIDE2_RS02615 bf35c43d40719c7d5c482896a60ee593 282 Gene3D G3DSA:1.10.1040.10 188 282 1.1E-34 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS02615 bf35c43d40719c7d5c482896a60ee593 282 SUPERFAMILY SSF48179 185 282 1.62E-33 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS02615 bf35c43d40719c7d5c482896a60ee593 282 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 207 - T 19-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS02615 bf35c43d40719c7d5c482896a60ee593 282 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 8.8E-65 T 19-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS02615 bf35c43d40719c7d5c482896a60ee593 282 SUPERFAMILY SSF51735 1 185 9.44E-59 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS02615 bf35c43d40719c7d5c482896a60ee593 282 PIRSF PIRSF000105 1 282 4.5E-87 T 19-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 ALIDE2_RS02615 bf35c43d40719c7d5c482896a60ee593 282 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 2.6E-35 T 19-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 ALIDE2_RS02615 bf35c43d40719c7d5c482896a60ee593 282 Gene3D G3DSA:3.40.50.720 1 187 1.3E-61 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS02615 bf35c43d40719c7d5c482896a60ee593 282 PANTHER PTHR23309 1 282 9.7E-143 T 19-04-2016 ALIDE2_RS17740 40ca734ad25214c44a957fd6869b9c7a 320 Gene3D G3DSA:1.10.287.890 211 293 6.0E-31 T 19-04-2016 ALIDE2_RS17740 40ca734ad25214c44a957fd6869b9c7a 320 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 296 1.4E-88 T 19-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 ALIDE2_RS17740 40ca734ad25214c44a957fd6869b9c7a 320 PANTHER PTHR11088 3 293 1.9E-95 T 19-04-2016 ALIDE2_RS17740 40ca734ad25214c44a957fd6869b9c7a 320 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 312 29.306 T 19-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 ALIDE2_RS17740 40ca734ad25214c44a957fd6869b9c7a 320 SUPERFAMILY SSF52540 11 156 4.12E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17740 40ca734ad25214c44a957fd6869b9c7a 320 Gene3D G3DSA:3.40.50.300 7 178 2.4E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17740 40ca734ad25214c44a957fd6869b9c7a 320 Pfam PF01715 IPP transferase 46 295 1.3E-84 T 19-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 ALIDE2_RS12170 336fe544c89e998e160ed5465515fd73 109 PANTHER PTHR36116:SF1 1 109 3.3E-48 T 19-04-2016 ALIDE2_RS12170 336fe544c89e998e160ed5465515fd73 109 SUPERFAMILY SSF103481 10 107 1.1E-7 T 19-04-2016 ALIDE2_RS12170 336fe544c89e998e160ed5465515fd73 109 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 108 25.853 T 19-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 ALIDE2_RS12170 336fe544c89e998e160ed5465515fd73 109 PANTHER PTHR36116 1 109 3.3E-48 T 19-04-2016 ALIDE2_RS12170 336fe544c89e998e160ed5465515fd73 109 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 5 109 6.2E-41 T 19-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 ALIDE2_RS13080 25a156f81d137f46a8c1e975aa51700a 375 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS13080 25a156f81d137f46a8c1e975aa51700a 375 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 241 1.6E-120 T 19-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 ALIDE2_RS13080 25a156f81d137f46a8c1e975aa51700a 375 Pfam PF00005 ABC transporter 18 164 6.5E-37 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS13080 25a156f81d137f46a8c1e975aa51700a 375 PANTHER PTHR24220:SF123 4 286 4.4E-142 T 19-04-2016 ALIDE2_RS13080 25a156f81d137f46a8c1e975aa51700a 375 SMART SM00382 27 214 1.4E-21 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS13080 25a156f81d137f46a8c1e975aa51700a 375 Pfam PF12857 TOBE-like domain 296 363 3.0E-19 T 19-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 ALIDE2_RS13080 25a156f81d137f46a8c1e975aa51700a 375 PANTHER PTHR24220 4 286 4.4E-142 T 19-04-2016 ALIDE2_RS13080 25a156f81d137f46a8c1e975aa51700a 375 Gene3D G3DSA:3.40.50.300 2 239 8.3E-86 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13080 25a156f81d137f46a8c1e975aa51700a 375 SUPERFAMILY SSF52540 3 244 6.62E-89 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13080 25a156f81d137f46a8c1e975aa51700a 375 SUPERFAMILY SSF50331 239 368 7.23E-6 T 19-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 PANTHER PTHR24322 10 142 2.5E-54 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 PANTHER PTHR24322 158 194 2.5E-54 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.0E-23 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.0E-23 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.0E-23 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.0E-23 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.0E-23 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.0E-23 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 Pfam PF00106 short chain dehydrogenase 6 196 6.6E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 Gene3D G3DSA:3.40.50.720 2 247 1.2E-64 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 PANTHER PTHR24322:SF356 10 142 2.5E-54 T 19-04-2016 ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 PANTHER PTHR24322:SF356 158 194 2.5E-54 T 19-04-2016 ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 4.4E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 4.4E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 4.4E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS16260 ee6f47d44f8d774d12d08231658e110d 252 SUPERFAMILY SSF51735 2 246 9.05E-57 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS14065 31200ba2253fcb59f4f2a4510c465920 303 SUPERFAMILY SSF55729 12 150 1.95E-15 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS14065 31200ba2253fcb59f4f2a4510c465920 303 Gene3D G3DSA:3.10.50.30 215 302 3.8E-21 T 19-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ALIDE2_RS14065 31200ba2253fcb59f4f2a4510c465920 303 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 221 293 1.5E-13 T 19-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ALIDE2_RS14065 31200ba2253fcb59f4f2a4510c465920 303 SUPERFAMILY SSF54534 219 294 8.76E-13 T 19-04-2016 ALIDE2_RS14065 31200ba2253fcb59f4f2a4510c465920 303 Pfam PF13302 Acetyltransferase (GNAT) domain 17 145 2.9E-12 T 19-04-2016 IPR000182 GNAT domain GO:0008080 ALIDE2_RS14065 31200ba2253fcb59f4f2a4510c465920 303 PANTHER PTHR30437 11 301 7.6E-36 T 19-04-2016 ALIDE2_RS14065 31200ba2253fcb59f4f2a4510c465920 303 Pfam PF14760 Rnk N-terminus 179 214 7.2E-8 T 19-04-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain ALIDE2_RS14065 31200ba2253fcb59f4f2a4510c465920 303 Gene3D G3DSA:3.40.630.30 12 150 8.4E-16 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS14065 31200ba2253fcb59f4f2a4510c465920 303 PANTHER PTHR30437:SF5 11 301 7.6E-36 T 19-04-2016 ALIDE2_RS00100 710ee0f9ba2b01b764d38216ee7f454e 536 Gene3D G3DSA:3.90.226.10 38 270 6.6E-49 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS00100 710ee0f9ba2b01b764d38216ee7f454e 536 Gene3D G3DSA:3.90.226.10 276 524 2.0E-69 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS00100 710ee0f9ba2b01b764d38216ee7f454e 536 PANTHER PTHR22855 15 536 4.0E-246 T 19-04-2016 ALIDE2_RS00100 710ee0f9ba2b01b764d38216ee7f454e 536 SUPERFAMILY SSF52096 31 269 4.43E-53 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS00100 710ee0f9ba2b01b764d38216ee7f454e 536 Pfam PF01039 Carboxyl transferase domain 47 523 5.6E-117 T 19-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS00100 710ee0f9ba2b01b764d38216ee7f454e 536 SUPERFAMILY SSF52096 238 515 1.35E-74 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS00100 710ee0f9ba2b01b764d38216ee7f454e 536 PANTHER PTHR22855:SF29 15 536 4.0E-246 T 19-04-2016 ALIDE2_RS20345 fd0a7fc2c0677270986960a45d66b60c 385 TIGRFAM TIGR03207 cyc_hxne_CoA_dh: cyclohexanecarboxyl-CoA dehydrogenase 8 378 1.2E-209 T 19-04-2016 IPR017620 Cyclohexanecarboxyl-CoA dehydrogenase ALIDE2_RS20345 fd0a7fc2c0677270986960a45d66b60c 385 Gene3D G3DSA:1.10.540.10 2 119 1.2E-25 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS20345 fd0a7fc2c0677270986960a45d66b60c 385 SUPERFAMILY SSF56645 4 241 1.57E-68 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS20345 fd0a7fc2c0677270986960a45d66b60c 385 Gene3D G3DSA:1.20.140.10 221 379 6.5E-47 T 19-04-2016 ALIDE2_RS20345 fd0a7fc2c0677270986960a45d66b60c 385 Gene3D G3DSA:2.40.110.10 123 220 1.8E-32 T 19-04-2016 ALIDE2_RS20345 fd0a7fc2c0677270986960a45d66b60c 385 PANTHER PTHR10909 1 375 1.4E-102 T 19-04-2016 ALIDE2_RS20345 fd0a7fc2c0677270986960a45d66b60c 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 4.9E-22 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS20345 fd0a7fc2c0677270986960a45d66b60c 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 375 5.6E-37 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS20345 fd0a7fc2c0677270986960a45d66b60c 385 PANTHER PTHR10909:SF305 1 375 1.4E-102 T 19-04-2016 ALIDE2_RS20345 fd0a7fc2c0677270986960a45d66b60c 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 119 5.3E-22 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS20345 fd0a7fc2c0677270986960a45d66b60c 385 SUPERFAMILY SSF47203 228 379 7.41E-39 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS04835 fe0c4dd06d284c33ffd89e1c3f7edf5d 465 Gene3D G3DSA:3.30.565.10 296 442 1.3E-19 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS04835 fe0c4dd06d284c33ffd89e1c3f7edf5d 465 SUPERFAMILY SSF55874 299 446 4.85E-23 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS04835 fe0c4dd06d284c33ffd89e1c3f7edf5d 465 SMART SM00388 244 309 2.9E-11 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS04835 fe0c4dd06d284c33ffd89e1c3f7edf5d 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 440 1.3E-6 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS04835 fe0c4dd06d284c33ffd89e1c3f7edf5d 465 PANTHER PTHR24423:SF354 223 433 2.5E-35 T 19-04-2016 ALIDE2_RS04835 fe0c4dd06d284c33ffd89e1c3f7edf5d 465 PANTHER PTHR24423 223 433 2.5E-35 T 19-04-2016 ALIDE2_RS04835 fe0c4dd06d284c33ffd89e1c3f7edf5d 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 309 5.6E-11 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS04835 fe0c4dd06d284c33ffd89e1c3f7edf5d 465 SUPERFAMILY SSF47384 228 310 2.16E-14 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS04835 fe0c4dd06d284c33ffd89e1c3f7edf5d 465 SMART SM00387 354 464 2.5E-8 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS04835 fe0c4dd06d284c33ffd89e1c3f7edf5d 465 Gene3D G3DSA:1.10.287.130 240 295 2.6E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS14610 4964abcf4793938443e0116ea95492e8 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.3E-22 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS14610 4964abcf4793938443e0116ea95492e8 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 2.3E-22 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS14610 4964abcf4793938443e0116ea95492e8 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 2.3E-22 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS14610 4964abcf4793938443e0116ea95492e8 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 2.3E-22 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS14610 4964abcf4793938443e0116ea95492e8 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.3E-22 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS14610 4964abcf4793938443e0116ea95492e8 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 19-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS14610 4964abcf4793938443e0116ea95492e8 193 SUPERFAMILY SSF54719 84 192 5.63E-39 T 19-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS14610 4964abcf4793938443e0116ea95492e8 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 7.4E-34 T 19-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS14610 4964abcf4793938443e0116ea95492e8 193 PANTHER PTHR11404 1 193 8.8E-97 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS14610 4964abcf4793938443e0116ea95492e8 193 Gene3D G3DSA:1.10.287.990 20 82 2.5E-23 T 19-04-2016 ALIDE2_RS14610 4964abcf4793938443e0116ea95492e8 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 81 1.0E-31 T 19-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS14610 4964abcf4793938443e0116ea95492e8 193 SUPERFAMILY SSF46609 1 84 2.88E-33 T 19-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS14610 4964abcf4793938443e0116ea95492e8 193 PIRSF PIRSF000349 1 193 3.2E-78 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS14610 4964abcf4793938443e0116ea95492e8 193 PANTHER PTHR11404:SF8 1 193 8.8E-97 T 19-04-2016 ALIDE2_RS06215 aea5d8249cd0c3622e28994eb2d4425e 397 Hamap MF_01113 DNA polymerase IV [dinB]. 5 397 32.293 T 19-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS06215 aea5d8249cd0c3622e28994eb2d4425e 397 Gene3D G3DSA:3.30.1490.100 277 381 6.7E-30 T 19-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS06215 aea5d8249cd0c3622e28994eb2d4425e 397 Pfam PF11799 impB/mucB/samB family C-terminal domain 272 385 6.5E-18 T 19-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS06215 aea5d8249cd0c3622e28994eb2d4425e 397 Pfam PF00817 impB/mucB/samB family 11 188 8.0E-46 T 19-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS06215 aea5d8249cd0c3622e28994eb2d4425e 397 Gene3D G3DSA:3.30.70.270 99 197 4.4E-27 T 19-04-2016 ALIDE2_RS06215 aea5d8249cd0c3622e28994eb2d4425e 397 PANTHER PTHR11076 4 42 1.4E-109 T 19-04-2016 ALIDE2_RS06215 aea5d8249cd0c3622e28994eb2d4425e 397 PANTHER PTHR11076 72 381 1.4E-109 T 19-04-2016 ALIDE2_RS06215 aea5d8249cd0c3622e28994eb2d4425e 397 SUPERFAMILY SSF56672 70 269 7.65E-78 T 19-04-2016 ALIDE2_RS06215 aea5d8249cd0c3622e28994eb2d4425e 397 SUPERFAMILY SSF56672 5 36 7.65E-78 T 19-04-2016 ALIDE2_RS06215 aea5d8249cd0c3622e28994eb2d4425e 397 Gene3D G3DSA:1.10.150.20 200 269 2.9E-22 T 19-04-2016 ALIDE2_RS06215 aea5d8249cd0c3622e28994eb2d4425e 397 SUPERFAMILY SSF100879 277 381 2.35E-25 T 19-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS06215 aea5d8249cd0c3622e28994eb2d4425e 397 Pfam PF11798 IMS family HHH motif 200 231 6.1E-6 T 19-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS17895 58f9b83c7a4c6565775b343294194103 101 SUPERFAMILY SSF46785 7 97 1.53E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17895 58f9b83c7a4c6565775b343294194103 101 Pfam PF01638 HxlR-like helix-turn-helix 19 95 1.8E-4 T 19-04-2016 IPR002577 Helix-turn-helix, HxlR type ALIDE2_RS17895 58f9b83c7a4c6565775b343294194103 101 Gene3D G3DSA:1.10.10.10 4 96 5.6E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS19980 60fd45a698f2df6a2b7a495852945018 215 PANTHER PTHR30353 1 215 3.4E-80 T 19-04-2016 IPR032818 DedA family ALIDE2_RS19980 60fd45a698f2df6a2b7a495852945018 215 Pfam PF09335 SNARE associated Golgi protein 49 174 2.6E-21 T 19-04-2016 IPR032816 SNARE associated Golgi protein ALIDE2_RS19980 60fd45a698f2df6a2b7a495852945018 215 PANTHER PTHR30353:SF0 1 215 3.4E-80 T 19-04-2016 ALIDE2_RS10685 8217184be6d44971c3e494a4832abd02 292 PANTHER PTHR13600 31 246 1.6E-25 T 19-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- ALIDE2_RS10685 8217184be6d44971c3e494a4832abd02 292 Gene3D G3DSA:3.40.50.150 83 257 8.6E-18 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS10685 8217184be6d44971c3e494a4832abd02 292 Pfam PF04072 Leucine carboxyl methyltransferase 81 200 8.6E-10 T 19-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- ALIDE2_RS10685 8217184be6d44971c3e494a4832abd02 292 SUPERFAMILY SSF53335 31 262 1.45E-36 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS10685 8217184be6d44971c3e494a4832abd02 292 PANTHER PTHR13600:SF19 31 246 1.6E-25 T 19-04-2016 ALIDE2_RS17825 9f9fd10bc9956aed19e7718e2d2daf7f 275 Gene3D G3DSA:3.40.190.10 16 158 3.5E-40 T 19-04-2016 ALIDE2_RS17825 9f9fd10bc9956aed19e7718e2d2daf7f 275 PANTHER PTHR37945 1 275 8.3E-99 T 19-04-2016 ALIDE2_RS17825 9f9fd10bc9956aed19e7718e2d2daf7f 275 Pfam PF12849 PBP superfamily domain 28 250 4.2E-29 T 19-04-2016 IPR024370 PBP domain ALIDE2_RS17825 9f9fd10bc9956aed19e7718e2d2daf7f 275 Gene3D G3DSA:3.40.190.10 192 273 3.3E-28 T 19-04-2016 ALIDE2_RS17825 9f9fd10bc9956aed19e7718e2d2daf7f 275 SUPERFAMILY SSF53850 34 260 3.01E-35 T 19-04-2016 ALIDE2_RS15250 c7b818a2fd47ea514f5971f165353aa3 325 Pfam PF08238 Sel1 repeat 69 95 0.57 T 19-04-2016 IPR006597 Sel1-like repeat ALIDE2_RS15250 c7b818a2fd47ea514f5971f165353aa3 325 Pfam PF08238 Sel1 repeat 98 130 7.8E-6 T 19-04-2016 IPR006597 Sel1-like repeat ALIDE2_RS15250 c7b818a2fd47ea514f5971f165353aa3 325 SUPERFAMILY SSF81901 62 135 1.44E-14 T 19-04-2016 ALIDE2_RS15250 c7b818a2fd47ea514f5971f165353aa3 325 Gene3D G3DSA:1.25.40.10 62 135 2.4E-16 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS15250 c7b818a2fd47ea514f5971f165353aa3 325 SUPERFAMILY SSF53955 164 295 5.91E-43 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS15250 c7b818a2fd47ea514f5971f165353aa3 325 Pfam PF01464 Transglycosylase SLT domain 181 282 1.8E-28 T 19-04-2016 IPR008258 Transglycosylase SLT domain 1 ALIDE2_RS15250 c7b818a2fd47ea514f5971f165353aa3 325 PANTHER PTHR21666 162 293 2.1E-35 T 19-04-2016 ALIDE2_RS15250 c7b818a2fd47ea514f5971f165353aa3 325 SMART SM00671 60 95 1.4 T 19-04-2016 IPR006597 Sel1-like repeat ALIDE2_RS15250 c7b818a2fd47ea514f5971f165353aa3 325 SMART SM00671 96 131 2.6E-9 T 19-04-2016 IPR006597 Sel1-like repeat ALIDE2_RS15250 c7b818a2fd47ea514f5971f165353aa3 325 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 198 226 - T 19-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 ALIDE2_RS15250 c7b818a2fd47ea514f5971f165353aa3 325 Gene3D G3DSA:1.10.530.10 174 297 2.6E-43 T 19-04-2016 ALIDE2_RS20555 f1a66c0519f58792f2ee752c903071ba 352 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 34 216 4.6E-50 T 19-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal ALIDE2_RS20555 f1a66c0519f58792f2ee752c903071ba 352 PANTHER PTHR11019 18 349 3.0E-25 T 19-04-2016 ALIDE2_RS20555 f1a66c0519f58792f2ee752c903071ba 352 SMART SM00342 259 341 1.7E-21 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS20555 f1a66c0519f58792f2ee752c903071ba 352 SUPERFAMILY SSF46689 294 344 9.47E-12 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS20555 f1a66c0519f58792f2ee752c903071ba 352 Pfam PF12833 Helix-turn-helix domain 265 342 7.4E-20 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS20555 f1a66c0519f58792f2ee752c903071ba 352 PANTHER PTHR11019:SF52 18 349 3.0E-25 T 19-04-2016 ALIDE2_RS20555 f1a66c0519f58792f2ee752c903071ba 352 Gene3D G3DSA:1.10.10.60 294 346 1.4E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS03570 0dd9d94482e4359ade7ba4f84d4b7964 86 Gene3D G3DSA:1.10.1200.10 1 79 2.8E-12 T 19-04-2016 IPR009081 Phosphopantetheine binding ACP domain ALIDE2_RS03570 0dd9d94482e4359ade7ba4f84d4b7964 86 SUPERFAMILY SSF47336 4 82 1.19E-10 T 19-04-2016 IPR009081 Phosphopantetheine binding ACP domain ALIDE2_RS03570 0dd9d94482e4359ade7ba4f84d4b7964 86 Pfam PF00550 Phosphopantetheine attachment site 25 77 8.4E-5 T 19-04-2016 IPR009081 Phosphopantetheine binding ACP domain ALIDE2_RS08290 6273e8a3f33e7fd60f31aae3add73fa1 422 Gene3D G3DSA:1.20.1600.10 38 419 3.2E-29 T 19-04-2016 ALIDE2_RS08290 6273e8a3f33e7fd60f31aae3add73fa1 422 SUPERFAMILY SSF56954 6 421 7.72E-44 T 19-04-2016 ALIDE2_RS08290 6273e8a3f33e7fd60f31aae3add73fa1 422 Pfam PF02321 Outer membrane efflux protein 258 418 5.3E-8 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS08290 6273e8a3f33e7fd60f31aae3add73fa1 422 Pfam PF02321 Outer membrane efflux protein 40 214 2.7E-9 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS08290 6273e8a3f33e7fd60f31aae3add73fa1 422 PANTHER PTHR30026 105 420 2.6E-17 T 19-04-2016 ALIDE2_RS12585 afc485857f6095bca31aff46f2af5664 295 PANTHER PTHR32196:SF27 1 290 1.6E-136 T 19-04-2016 ALIDE2_RS12585 afc485857f6095bca31aff46f2af5664 295 PANTHER PTHR32196 1 290 1.6E-136 T 19-04-2016 ALIDE2_RS12585 afc485857f6095bca31aff46f2af5664 295 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 252 3.3E-33 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS02640 985d8d5857d1c70d386dc449ed0d0092 570 Gene3D G3DSA:3.40.50.1820 275 276 1.7E-18 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS02640 985d8d5857d1c70d386dc449ed0d0092 570 Gene3D G3DSA:3.40.50.1820 443 518 1.7E-18 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS02640 985d8d5857d1c70d386dc449ed0d0092 570 Gene3D G3DSA:3.40.50.1820 103 239 1.7E-18 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS02640 985d8d5857d1c70d386dc449ed0d0092 570 PANTHER PTHR33938:SF6 18 570 3.1E-82 T 19-04-2016 ALIDE2_RS02640 985d8d5857d1c70d386dc449ed0d0092 570 PANTHER PTHR33938 18 570 3.1E-82 T 19-04-2016 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 ALIDE2_RS02640 985d8d5857d1c70d386dc449ed0d0092 570 SUPERFAMILY SSF53474 103 242 3.3E-18 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS02640 985d8d5857d1c70d386dc449ed0d0092 570 SUPERFAMILY SSF53474 384 504 3.3E-18 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS02640 985d8d5857d1c70d386dc449ed0d0092 570 Pfam PF07519 Tannase and feruloyl esterase 88 568 9.5E-113 T 19-04-2016 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 ALIDE2_RS22675 4b424e77e63a270d01a861868cdf1616 317 Pfam PF02355 Protein export membrane protein 108 291 1.3E-62 T 19-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ALIDE2_RS22675 4b424e77e63a270d01a861868cdf1616 317 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 4.7E-73 T 19-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ALIDE2_RS22675 4b424e77e63a270d01a861868cdf1616 317 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 7.4E-27 T 19-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ALIDE2_RS22675 4b424e77e63a270d01a861868cdf1616 317 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 7.4E-27 T 19-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ALIDE2_RS22675 4b424e77e63a270d01a861868cdf1616 317 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 7.4E-27 T 19-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ALIDE2_RS22675 4b424e77e63a270d01a861868cdf1616 317 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 7.4E-27 T 19-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ALIDE2_RS22675 4b424e77e63a270d01a861868cdf1616 317 SUPERFAMILY SSF82866 74 294 4.05E-40 T 19-04-2016 ALIDE2_RS22675 4b424e77e63a270d01a861868cdf1616 317 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 28.841 T 19-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ALIDE2_RS22675 4b424e77e63a270d01a861868cdf1616 317 Gene3D G3DSA:1.20.1640.10 99 297 8.4E-30 T 19-04-2016 ALIDE2_RS22675 4b424e77e63a270d01a861868cdf1616 317 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 96 280 6.1E-48 T 19-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ALIDE2_RS22675 4b424e77e63a270d01a861868cdf1616 317 Pfam PF07549 SecD/SecF GG Motif 32 59 6.9E-8 T 19-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ALIDE2_RS22675 4b424e77e63a270d01a861868cdf1616 317 PANTHER PTHR30081 10 315 6.7E-74 T 19-04-2016 ALIDE2_RS17550 1d9840b5c2349e688d5feb9a43e310ce 398 Gene3D G3DSA:3.90.1150.10 303 393 1.4E-37 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS17550 1d9840b5c2349e688d5feb9a43e310ce 398 Gene3D G3DSA:3.90.1150.10 3 55 1.4E-37 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS17550 1d9840b5c2349e688d5feb9a43e310ce 398 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 389 1.2E-137 T 19-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ALIDE2_RS17550 1d9840b5c2349e688d5feb9a43e310ce 398 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 219 256 - T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ALIDE2_RS17550 1d9840b5c2349e688d5feb9a43e310ce 398 PANTHER PTHR11986:SF79 3 388 4.4E-160 T 19-04-2016 ALIDE2_RS17550 1d9840b5c2349e688d5feb9a43e310ce 398 Pfam PF00202 Aminotransferase class-III 18 386 2.3E-109 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ALIDE2_RS17550 1d9840b5c2349e688d5feb9a43e310ce 398 Gene3D G3DSA:3.40.640.10 56 301 7.0E-84 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS17550 1d9840b5c2349e688d5feb9a43e310ce 398 PANTHER PTHR11986 3 388 4.4E-160 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ALIDE2_RS17550 1d9840b5c2349e688d5feb9a43e310ce 398 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 9 393 44.078 T 19-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ALIDE2_RS17550 1d9840b5c2349e688d5feb9a43e310ce 398 SUPERFAMILY SSF53383 11 389 9.39E-123 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS21100 df9f9f6713716c7d18259699318ce245 700 Pfam PF11412 Disulphide bond corrector protein DsbC 28 142 3.4E-21 T 19-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain ALIDE2_RS21100 df9f9f6713716c7d18259699318ce245 700 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 308 484 1.1E-12 T 19-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 ALIDE2_RS21100 df9f9f6713716c7d18259699318ce245 700 ProSitePatterns PS00194 Thioredoxin family active site. 610 628 - T 19-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 ALIDE2_RS21100 df9f9f6713716c7d18259699318ce245 700 PANTHER PTHR32234 6 238 1.9E-138 T 19-04-2016 ALIDE2_RS21100 df9f9f6713716c7d18259699318ce245 700 PANTHER PTHR32234 263 700 1.9E-138 T 19-04-2016 ALIDE2_RS21100 df9f9f6713716c7d18259699318ce245 700 SUPERFAMILY SSF52833 599 698 9.78E-15 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS21100 df9f9f6713716c7d18259699318ce245 700 Pfam PF13899 Thioredoxin-like 596 675 2.9E-17 T 19-04-2016 ALIDE2_RS21100 df9f9f6713716c7d18259699318ce245 700 PANTHER PTHR32234:SF3 6 238 1.9E-138 T 19-04-2016 ALIDE2_RS21100 df9f9f6713716c7d18259699318ce245 700 PANTHER PTHR32234:SF3 263 700 1.9E-138 T 19-04-2016 ALIDE2_RS21100 df9f9f6713716c7d18259699318ce245 700 Gene3D G3DSA:3.40.30.10 591 682 2.8E-13 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS04965 81dcb3fb6215a00dee75543583e0071e 210 PANTHER PTHR26402 2 209 2.2E-67 T 19-04-2016 ALIDE2_RS04965 81dcb3fb6215a00dee75543583e0071e 210 Pfam PF00072 Response regulator receiver domain 5 116 6.2E-28 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS04965 81dcb3fb6215a00dee75543583e0071e 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS04965 81dcb3fb6215a00dee75543583e0071e 210 Gene3D G3DSA:3.40.50.2300 1 119 2.6E-34 T 19-04-2016 ALIDE2_RS04965 81dcb3fb6215a00dee75543583e0071e 210 SUPERFAMILY SSF46894 136 209 4.42E-18 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS04965 81dcb3fb6215a00dee75543583e0071e 210 SMART SM00421 146 203 8.1E-18 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS04965 81dcb3fb6215a00dee75543583e0071e 210 PANTHER PTHR26402:SF458 2 209 2.2E-67 T 19-04-2016 ALIDE2_RS04965 81dcb3fb6215a00dee75543583e0071e 210 Gene3D G3DSA:1.10.10.10 120 209 3.2E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS04965 81dcb3fb6215a00dee75543583e0071e 210 SMART SM00448 2 115 3.8E-29 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS04965 81dcb3fb6215a00dee75543583e0071e 210 SUPERFAMILY SSF52172 1 132 1.2E-32 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS04965 81dcb3fb6215a00dee75543583e0071e 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 8.3E-16 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS04965 81dcb3fb6215a00dee75543583e0071e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 3.1E-9 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS04965 81dcb3fb6215a00dee75543583e0071e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 3.1E-9 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS04965 81dcb3fb6215a00dee75543583e0071e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 3.1E-9 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS01530 212b3d7c1be277a20124b7f8a18f610e 237 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS01530 212b3d7c1be277a20124b7f8a18f610e 237 PANTHER PTHR24220 5 237 1.5E-108 T 19-04-2016 ALIDE2_RS01530 212b3d7c1be277a20124b7f8a18f610e 237 Gene3D G3DSA:3.40.50.300 3 228 3.0E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01530 212b3d7c1be277a20124b7f8a18f610e 237 SMART SM00382 28 214 1.8E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS01530 212b3d7c1be277a20124b7f8a18f610e 237 PANTHER PTHR24220:SF568 5 237 1.5E-108 T 19-04-2016 ALIDE2_RS01530 212b3d7c1be277a20124b7f8a18f610e 237 SUPERFAMILY SSF52540 3 228 3.29E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01530 212b3d7c1be277a20124b7f8a18f610e 237 Pfam PF00005 ABC transporter 19 164 7.1E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS11030 1eb4289a9f7a2f0a8400e6cabcced35b 263 PANTHER PTHR10108 170 240 7.7E-64 T 19-04-2016 ALIDE2_RS11030 1eb4289a9f7a2f0a8400e6cabcced35b 263 PANTHER PTHR10108 1 153 7.7E-64 T 19-04-2016 ALIDE2_RS11030 1eb4289a9f7a2f0a8400e6cabcced35b 263 Gene3D G3DSA:1.10.150.290 187 240 2.2E-27 T 19-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 ALIDE2_RS11030 1eb4289a9f7a2f0a8400e6cabcced35b 263 PANTHER PTHR10108:SF890 170 240 7.7E-64 T 19-04-2016 ALIDE2_RS11030 1eb4289a9f7a2f0a8400e6cabcced35b 263 PANTHER PTHR10108:SF890 1 153 7.7E-64 T 19-04-2016 ALIDE2_RS11030 1eb4289a9f7a2f0a8400e6cabcced35b 263 SUPERFAMILY SSF53335 8 217 2.43E-32 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS11030 1eb4289a9f7a2f0a8400e6cabcced35b 263 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 262 41.678 T 19-04-2016 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 ALIDE2_RS11030 1eb4289a9f7a2f0a8400e6cabcced35b 263 Gene3D G3DSA:3.40.50.150 3 150 2.3E-33 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS11030 1eb4289a9f7a2f0a8400e6cabcced35b 263 Pfam PF13649 Methyltransferase domain 35 126 1.4E-15 T 19-04-2016 ALIDE2_RS15840 3dc4d244a2f9a3231100fc0a58103bfd 218 SUPERFAMILY SSF52540 1 203 2.45E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15840 3dc4d244a2f9a3231100fc0a58103bfd 218 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 201 7.1E-44 T 19-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 ALIDE2_RS15840 3dc4d244a2f9a3231100fc0a58103bfd 218 Gene3D G3DSA:3.40.50.300 4 209 2.6E-68 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15840 3dc4d244a2f9a3231100fc0a58103bfd 218 Hamap MF_00165 Thymidylate kinase [tmk]. 5 211 28.764 T 19-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 ALIDE2_RS15840 3dc4d244a2f9a3231100fc0a58103bfd 218 PANTHER PTHR10344 1 210 1.9E-60 T 19-04-2016 ALIDE2_RS15840 3dc4d244a2f9a3231100fc0a58103bfd 218 Pfam PF02223 Thymidylate kinase 9 201 7.4E-44 T 19-04-2016 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 Gene3D G3DSA:2.40.37.10 213 357 2.9E-50 T 19-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 Pfam PF00842 Alanine racemase, C-terminal domain 233 355 1.0E-34 T 19-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 Hamap MF_01201 Alanine racemase. 2 356 33.007 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 PRINTS PR00992 Alanine racemase signature 124 136 3.8E-62 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 PRINTS PR00992 Alanine racemase signature 195 222 3.8E-62 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 PRINTS PR00992 Alanine racemase signature 158 169 3.8E-62 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 PRINTS PR00992 Alanine racemase signature 26 42 3.8E-62 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 PRINTS PR00992 Alanine racemase signature 287 304 3.8E-62 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 PRINTS PR00992 Alanine racemase signature 339 352 3.8E-62 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 PRINTS PR00992 Alanine racemase signature 249 264 3.8E-62 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 PRINTS PR00992 Alanine racemase signature 61 79 3.8E-62 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 PRINTS PR00992 Alanine racemase signature 266 281 3.8E-62 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 Gene3D G3DSA:3.20.20.10 11 212 2.8E-68 T 19-04-2016 IPR029066 PLP-binding barrel ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 TIGRFAM TIGR00492 alr: alanine racemase 5 356 1.2E-99 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 19-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 SUPERFAMILY SSF51419 10 233 9.98E-65 T 19-04-2016 IPR029066 PLP-binding barrel ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 SMART SM01005 233 356 1.8E-58 T 19-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 PANTHER PTHR30511:SF0 1 357 3.0E-126 T 19-04-2016 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 PANTHER PTHR30511 1 357 3.0E-126 T 19-04-2016 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 SUPERFAMILY SSF50621 230 356 5.23E-42 T 19-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 ALIDE2_RS22640 fb002753c50c118c0988a77cff005412 358 Pfam PF01168 Alanine racemase, N-terminal domain 10 222 2.3E-67 T 19-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS05345 ce9587808f119ca6f64024160605d73b 237 SUPERFAMILY SSF102712 158 214 5.89E-5 T 19-04-2016 ALIDE2_RS05345 ce9587808f119ca6f64024160605d73b 237 Gene3D G3DSA:3.40.140.10 113 236 1.1E-47 T 19-04-2016 ALIDE2_RS05345 ce9587808f119ca6f64024160605d73b 237 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 186 191 - T 19-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site ALIDE2_RS05345 ce9587808f119ca6f64024160605d73b 237 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 236 4.0E-64 T 19-04-2016 IPR001405 RadC protein ALIDE2_RS05345 ce9587808f119ca6f64024160605d73b 237 Pfam PF04002 RadC-like JAB domain 117 236 3.1E-42 T 19-04-2016 IPR025657 RadC-like JAB domain ALIDE2_RS05345 ce9587808f119ca6f64024160605d73b 237 PANTHER PTHR30471:SF5 1 237 4.8E-96 T 19-04-2016 ALIDE2_RS05345 ce9587808f119ca6f64024160605d73b 237 PANTHER PTHR30471 1 237 4.8E-96 T 19-04-2016 ALIDE2_RS18655 97b2f33a0335c11cd9a5c8db040a5574 260 SUPERFAMILY SSF75217 125 180 4.91E-30 T 19-04-2016 IPR029028 Alpha/beta knot methyltransferases ALIDE2_RS18655 97b2f33a0335c11cd9a5c8db040a5574 260 SUPERFAMILY SSF75217 3 94 4.91E-30 T 19-04-2016 IPR029028 Alpha/beta knot methyltransferases ALIDE2_RS18655 97b2f33a0335c11cd9a5c8db040a5574 260 Pfam PF00588 SpoU rRNA Methylase family 4 173 1.5E-26 T 19-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ALIDE2_RS18655 97b2f33a0335c11cd9a5c8db040a5574 260 PANTHER PTHR12029 114 200 4.9E-25 T 19-04-2016 ALIDE2_RS18655 97b2f33a0335c11cd9a5c8db040a5574 260 PANTHER PTHR12029 6 86 4.9E-25 T 19-04-2016 ALIDE2_RS18655 97b2f33a0335c11cd9a5c8db040a5574 260 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 3 252 1.4E-50 T 19-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 ALIDE2_RS18655 97b2f33a0335c11cd9a5c8db040a5574 260 Gene3D G3DSA:3.40.1280.10 3 180 7.7E-28 T 19-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ALIDE2_RS18655 97b2f33a0335c11cd9a5c8db040a5574 260 PIRSF PIRSF004808 1 259 2.9E-58 T 19-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 ALIDE2_RS20575 8c2d4d93e1b2a7036ac13cf9f2fae321 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 290 1.0E-32 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS20575 8c2d4d93e1b2a7036ac13cf9f2fae321 306 PANTHER PTHR11795:SF371 2 306 2.8E-76 T 19-04-2016 ALIDE2_RS20575 8c2d4d93e1b2a7036ac13cf9f2fae321 306 PANTHER PTHR11795 2 306 2.8E-76 T 19-04-2016 ALIDE2_RS21120 b6aeedcdbd79269697e3021639702902 372 Gene3D G3DSA:3.20.20.210 2 368 2.0E-142 T 19-04-2016 ALIDE2_RS21120 b6aeedcdbd79269697e3021639702902 372 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 9 364 1.3E-127 T 19-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS21120 b6aeedcdbd79269697e3021639702902 372 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 145 161 - T 19-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS21120 b6aeedcdbd79269697e3021639702902 372 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 13 363 2.0E-118 T 19-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS21120 b6aeedcdbd79269697e3021639702902 372 SUPERFAMILY SSF51726 7 368 1.41E-107 T 19-04-2016 ALIDE2_RS21120 b6aeedcdbd79269697e3021639702902 372 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 26 35 - T 19-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS21120 b6aeedcdbd79269697e3021639702902 372 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 10 366 47.14 T 19-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS21120 b6aeedcdbd79269697e3021639702902 372 PANTHER PTHR21091 9 371 1.2E-134 T 19-04-2016 ALIDE2_RS21120 b6aeedcdbd79269697e3021639702902 372 PANTHER PTHR21091:SF2 9 371 1.2E-134 T 19-04-2016 ALIDE2_RS14325 40eabb086b70dfb7136a1ffa90f714d2 268 Gene3D G3DSA:1.10.10.10 36 104 4.9E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14325 40eabb086b70dfb7136a1ffa90f714d2 268 Pfam PF00392 Bacterial regulatory proteins, gntR family 44 101 1.9E-20 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS14325 40eabb086b70dfb7136a1ffa90f714d2 268 SUPERFAMILY SSF48008 122 258 3.14E-28 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS14325 40eabb086b70dfb7136a1ffa90f714d2 268 Pfam PF07729 FCD domain 126 251 7.5E-26 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS14325 40eabb086b70dfb7136a1ffa90f714d2 268 SMART SM00345 42 101 1.0E-22 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS14325 40eabb086b70dfb7136a1ffa90f714d2 268 SUPERFAMILY SSF46785 34 105 4.09E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14325 40eabb086b70dfb7136a1ffa90f714d2 268 Gene3D G3DSA:1.20.120.530 122 260 1.0E-30 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS14325 40eabb086b70dfb7136a1ffa90f714d2 268 PANTHER PTHR11751 44 141 1.3E-25 T 19-04-2016 ALIDE2_RS14325 40eabb086b70dfb7136a1ffa90f714d2 268 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 75 91 3.7E-9 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS14325 40eabb086b70dfb7136a1ffa90f714d2 268 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 75 3.7E-9 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS14325 40eabb086b70dfb7136a1ffa90f714d2 268 SMART SM00895 125 252 4.8E-24 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS18460 b37b662e21ba079a81cad3187d5038b4 266 SUPERFAMILY SSF161098 9 256 1.96E-41 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18460 b37b662e21ba079a81cad3187d5038b4 266 PANTHER PTHR30193 1 262 4.0E-40 T 19-04-2016 ALIDE2_RS18460 b37b662e21ba079a81cad3187d5038b4 266 Gene3D G3DSA:1.10.3720.10 11 264 1.0E-38 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18460 b37b662e21ba079a81cad3187d5038b4 266 PANTHER PTHR30193:SF20 1 262 4.0E-40 T 19-04-2016 ALIDE2_RS18460 b37b662e21ba079a81cad3187d5038b4 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 260 1.4E-13 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS05215 170e543b809d5e97ac831ef5b030d3f4 268 PIRSF PIRSF015582 1 268 1.0E-74 T 19-04-2016 IPR011206 Citrate lyase beta subunit-like ALIDE2_RS05215 170e543b809d5e97ac831ef5b030d3f4 268 SUPERFAMILY SSF51621 3 218 1.12E-59 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS05215 170e543b809d5e97ac831ef5b030d3f4 268 Gene3D G3DSA:3.20.20.60 3 220 2.0E-66 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS05215 170e543b809d5e97ac831ef5b030d3f4 268 PANTHER PTHR32308 1 268 6.7E-73 T 19-04-2016 IPR011206 Citrate lyase beta subunit-like ALIDE2_RS05215 170e543b809d5e97ac831ef5b030d3f4 268 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 4 208 1.8E-31 T 19-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ALIDE2_RS15760 54a9beff30b751e0f06261a095ba69c5 262 SUPERFAMILY SSF48452 145 256 1.12E-13 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS15760 54a9beff30b751e0f06261a095ba69c5 262 PANTHER PTHR26312 152 258 5.8E-12 T 19-04-2016 ALIDE2_RS15760 54a9beff30b751e0f06261a095ba69c5 262 Pfam PF16331 TolA binding protein trimerisation 45 125 1.4E-10 T 19-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 ALIDE2_RS15760 54a9beff30b751e0f06261a095ba69c5 262 PANTHER PTHR26312:SF74 152 258 5.8E-12 T 19-04-2016 ALIDE2_RS15760 54a9beff30b751e0f06261a095ba69c5 262 Pfam PF13525 Outer membrane lipoprotein 142 262 1.1E-11 T 19-04-2016 ALIDE2_RS15760 54a9beff30b751e0f06261a095ba69c5 262 Gene3D G3DSA:1.25.40.10 145 258 5.5E-13 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS15760 54a9beff30b751e0f06261a095ba69c5 262 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 141 258 7.9E-34 T 19-04-2016 IPR014162 Tol-Pal system, YbgF ALIDE2_RS20230 f1c99665ee4f85e34787fb002d6bb4b4 269 SUPERFAMILY SSF109604 44 224 3.11E-38 T 19-04-2016 ALIDE2_RS20230 f1c99665ee4f85e34787fb002d6bb4b4 269 Pfam PF13487 HD domain 113 176 1.7E-19 T 19-04-2016 ALIDE2_RS20230 f1c99665ee4f85e34787fb002d6bb4b4 269 Gene3D G3DSA:1.10.3210.10 60 223 3.9E-19 T 19-04-2016 IPR006674 HD domain ALIDE2_RS20230 f1c99665ee4f85e34787fb002d6bb4b4 269 SMART SM00471 58 195 5.5E-8 T 19-04-2016 IPR003607 HD/PDEase domain ALIDE2_RS18015 409b3a400cf308e42f3f450659ce9ef7 324 SUPERFAMILY SSF53850 116 284 7.91E-16 T 19-04-2016 ALIDE2_RS18015 409b3a400cf308e42f3f450659ce9ef7 324 PANTHER PTHR30349:SF1 1 284 3.9E-67 T 19-04-2016 ALIDE2_RS18015 409b3a400cf308e42f3f450659ce9ef7 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 314 1.6E-69 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS18015 409b3a400cf308e42f3f450659ce9ef7 324 PIRSF PIRSF017082 1 324 1.3E-65 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS18015 409b3a400cf308e42f3f450659ce9ef7 324 Gene3D G3DSA:3.40.190.10 128 238 9.7E-7 T 19-04-2016 ALIDE2_RS18015 409b3a400cf308e42f3f450659ce9ef7 324 PANTHER PTHR30349 1 284 3.9E-67 T 19-04-2016 ALIDE2_RS15395 dd00b21361174a0a102b2fb799b8bec7 423 PANTHER PTHR30569 1 358 2.5E-35 T 19-04-2016 IPR030191 Cytosine permease GO:0015209|GO:0016021 ALIDE2_RS15395 dd00b21361174a0a102b2fb799b8bec7 423 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 14 358 1.5E-15 T 19-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 ALIDE2_RS14865 686ad7d0223dccfcea1af27a3c64a0ba 516 Pfam PF03441 FAD binding domain of DNA photolyase 273 470 2.8E-46 T 19-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain ALIDE2_RS14865 686ad7d0223dccfcea1af27a3c64a0ba 516 Gene3D G3DSA:1.10.579.10 284 474 4.7E-46 T 19-04-2016 ALIDE2_RS14865 686ad7d0223dccfcea1af27a3c64a0ba 516 Gene3D G3DSA:1.25.40.80 145 283 2.0E-18 T 19-04-2016 ALIDE2_RS14865 686ad7d0223dccfcea1af27a3c64a0ba 516 SUPERFAMILY SSF48173 191 475 4.71E-73 T 19-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain ALIDE2_RS14865 686ad7d0223dccfcea1af27a3c64a0ba 516 Gene3D G3DSA:3.40.50.620 2 144 1.6E-36 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS14865 686ad7d0223dccfcea1af27a3c64a0ba 516 PANTHER PTHR11455 1 488 4.4E-169 T 19-04-2016 ALIDE2_RS14865 686ad7d0223dccfcea1af27a3c64a0ba 516 SUPERFAMILY SSF52425 3 185 3.27E-41 T 19-04-2016 IPR006050 DNA photolyase, N-terminal ALIDE2_RS14865 686ad7d0223dccfcea1af27a3c64a0ba 516 PANTHER PTHR11455:SF21 1 488 4.4E-169 T 19-04-2016 ALIDE2_RS14865 686ad7d0223dccfcea1af27a3c64a0ba 516 Pfam PF00875 DNA photolyase 4 132 7.7E-23 T 19-04-2016 IPR006050 DNA photolyase, N-terminal ALIDE2_RS16545 de5015772ab07063643badc880ec1499 81 SMART SM00530 20 75 2.8E-9 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS16545 de5015772ab07063643badc880ec1499 81 PANTHER PTHR10245:SF49 12 80 1.4E-12 T 19-04-2016 ALIDE2_RS16545 de5015772ab07063643badc880ec1499 81 Pfam PF13560 Helix-turn-helix domain 16 74 8.9E-10 T 19-04-2016 ALIDE2_RS16545 de5015772ab07063643badc880ec1499 81 PANTHER PTHR10245 12 80 1.4E-12 T 19-04-2016 ALIDE2_RS16545 de5015772ab07063643badc880ec1499 81 SUPERFAMILY SSF47413 14 78 1.41E-14 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS16545 de5015772ab07063643badc880ec1499 81 Gene3D G3DSA:1.10.260.40 13 80 6.9E-19 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS07370 03a49effd8f23144a16bba78a70430fa 321 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 314 4.8E-76 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS07370 03a49effd8f23144a16bba78a70430fa 321 PANTHER PTHR30349 1 270 2.8E-77 T 19-04-2016 ALIDE2_RS07370 03a49effd8f23144a16bba78a70430fa 321 SUPERFAMILY SSF53850 111 275 1.38E-11 T 19-04-2016 ALIDE2_RS07370 03a49effd8f23144a16bba78a70430fa 321 PIRSF PIRSF017082 1 321 6.7E-79 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS07370 03a49effd8f23144a16bba78a70430fa 321 PANTHER PTHR30349:SF16 1 270 2.8E-77 T 19-04-2016 ALIDE2_RS22665 31f2eddc4e81f89be02412940c341f44 152 PANTHER PTHR33602 8 152 4.8E-19 T 19-04-2016 ALIDE2_RS22665 31f2eddc4e81f89be02412940c341f44 152 Gene3D G3DSA:1.10.10.10 101 150 8.4E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22665 31f2eddc4e81f89be02412940c341f44 152 Hamap MF_01114 Regulatory protein RecX [recX]. 2 152 12.966 T 19-04-2016 IPR003783 Regulatory protein RecX GO:0006282 ALIDE2_RS22665 31f2eddc4e81f89be02412940c341f44 152 Gene3D G3DSA:1.10.10.10 56 92 8.5E-8 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22665 31f2eddc4e81f89be02412940c341f44 152 Gene3D G3DSA:1.10.10.10 7 52 3.6E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22665 31f2eddc4e81f89be02412940c341f44 152 Pfam PF02631 RecX family 31 147 3.3E-24 T 19-04-2016 IPR003783 Regulatory protein RecX GO:0006282 ALIDE2_RS22665 31f2eddc4e81f89be02412940c341f44 152 PANTHER PTHR33602:SF1 8 152 4.8E-19 T 19-04-2016 ALIDE2_RS07405 ef94ecd54bd4d6bab9f35191a4494f0f 249 PANTHER PTHR24220:SF358 9 248 2.2E-92 T 19-04-2016 ALIDE2_RS07405 ef94ecd54bd4d6bab9f35191a4494f0f 249 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 222 244 3.2E-6 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALIDE2_RS07405 ef94ecd54bd4d6bab9f35191a4494f0f 249 Gene3D G3DSA:3.40.50.300 4 242 7.2E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07405 ef94ecd54bd4d6bab9f35191a4494f0f 249 PANTHER PTHR24220 9 248 2.2E-92 T 19-04-2016 ALIDE2_RS07405 ef94ecd54bd4d6bab9f35191a4494f0f 249 Pfam PF00005 ABC transporter 24 172 2.3E-25 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS07405 ef94ecd54bd4d6bab9f35191a4494f0f 249 SUPERFAMILY SSF52540 7 245 2.66E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07405 ef94ecd54bd4d6bab9f35191a4494f0f 249 SMART SM00382 32 245 2.3E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 Pfam PF00403 Heavy-metal-associated domain 106 163 2.9E-5 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 Pfam PF00403 Heavy-metal-associated domain 33 89 9.5E-6 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 Gene3D G3DSA:2.70.150.10 244 396 3.3E-24 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 PANTHER PTHR24093:SF317 31 791 4.0E-266 T 19-04-2016 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 PRINTS PR00941 Cadmium-transporting ATPase signature 225 237 8.7E-16 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 PRINTS PR00941 Cadmium-transporting ATPase signature 380 394 8.7E-16 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 PRINTS PR00941 Cadmium-transporting ATPase signature 117 138 8.7E-16 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 PRINTS PR00941 Cadmium-transporting ATPase signature 279 299 8.7E-16 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 PRINTS PR00941 Cadmium-transporting ATPase signature 33 42 8.7E-16 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 PRINTS PR00941 Cadmium-transporting ATPase signature 208 225 8.7E-16 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 PRINTS PR00941 Cadmium-transporting ATPase signature 361 377 8.7E-16 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 SUPERFAMILY SSF56784 553 794 2.16E-54 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 SUPERFAMILY SSF56784 495 514 2.16E-54 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 Pfam PF00702 haloacid dehalogenase-like hydrolase 494 708 9.7E-41 T 19-04-2016 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 496 510 1.8E-23 T 19-04-2016 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 694 713 1.8E-23 T 19-04-2016 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 345 359 1.8E-23 T 19-04-2016 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 718 730 1.8E-23 T 19-04-2016 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 652 1.8E-23 T 19-04-2016 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 245 799 1.1E-144 T 19-04-2016 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 Gene3D G3DSA:3.30.70.100 33 90 7.3E-6 T 19-04-2016 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 SUPERFAMILY SSF81653 299 395 2.09E-23 T 19-04-2016 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 Gene3D G3DSA:3.40.50.1000 469 510 4.3E-40 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 Gene3D G3DSA:3.40.50.1000 623 763 4.3E-40 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 244 797 2.4E-177 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 SUPERFAMILY SSF55008 101 169 9.42E-12 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 Pfam PF00122 E1-E2 ATPase 265 487 1.6E-65 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 267 778 1.6E-75 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 SUPERFAMILY SSF55008 27 96 1.83E-10 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 226 796 1.2E-122 T 19-04-2016 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 SUPERFAMILY SSF81665 396 488 3.4E-16 T 19-04-2016 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 SUPERFAMILY SSF81665 244 298 3.4E-16 T 19-04-2016 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 Gene3D G3DSA:3.40.1110.10 511 622 3.3E-18 T 19-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 PANTHER PTHR24093 31 791 4.0E-266 T 19-04-2016 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 Gene3D G3DSA:3.30.70.100 101 170 7.1E-11 T 19-04-2016 ALIDE2_RS09090 d916db50553d94bb2aa92d77ab83c7e6 800 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 498 504 - T 19-04-2016 IPR018303 P-type ATPase, phosphorylation site ALIDE2_RS00390 bd8fb5c099427a79172288dfa311bc68 171 PANTHER PTHR34846:SF2 2 170 1.8E-32 T 19-04-2016 ALIDE2_RS00390 bd8fb5c099427a79172288dfa311bc68 171 SUPERFAMILY SSF69118 10 169 4.97E-30 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS00390 bd8fb5c099427a79172288dfa311bc68 171 Pfam PF02627 Carboxymuconolactone decarboxylase family 39 108 1.9E-10 T 19-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS00390 bd8fb5c099427a79172288dfa311bc68 171 Gene3D G3DSA:1.20.1290.10 29 169 5.0E-35 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS00390 bd8fb5c099427a79172288dfa311bc68 171 PANTHER PTHR34846 2 170 1.8E-32 T 19-04-2016 ALIDE2_RS22195 00b95665986ba63abbffce241ea9a77b 139 Gene3D G3DSA:1.10.10.10 4 82 6.6E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22195 00b95665986ba63abbffce241ea9a77b 139 SUPERFAMILY SSF46785 4 133 2.64E-40 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22195 00b95665986ba63abbffce241ea9a77b 139 Pfam PF01475 Ferric uptake regulator family 10 129 1.8E-43 T 19-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ALIDE2_RS22195 00b95665986ba63abbffce241ea9a77b 139 PANTHER PTHR33202 4 139 2.9E-42 T 19-04-2016 ALIDE2_RS14770 9b1166133954bf72d07703a8b339cfdd 212 SUPERFAMILY SSF52540 1 210 2.58E-41 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14770 9b1166133954bf72d07703a8b339cfdd 212 PANTHER PTHR13696 1 209 4.9E-63 T 19-04-2016 ALIDE2_RS14770 9b1166133954bf72d07703a8b339cfdd 212 PIRSF PIRSF009320 1 210 7.9E-50 T 19-04-2016 ALIDE2_RS14770 9b1166133954bf72d07703a8b339cfdd 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 145 1.8E-25 T 19-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE2_RS14770 9b1166133954bf72d07703a8b339cfdd 212 Gene3D G3DSA:3.40.50.300 1 210 2.5E-38 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14770 9b1166133954bf72d07703a8b339cfdd 212 PANTHER PTHR13696:SF54 1 209 4.9E-63 T 19-04-2016 ALIDE2_RS11575 8c63899869107c5b74284c082dd8d381 787 Pfam PF01594 Domain of unknown function DUF20 29 361 3.1E-47 T 19-04-2016 IPR002549 Transmembrane protein TqsA-like ALIDE2_RS11575 8c63899869107c5b74284c082dd8d381 787 SMART SM00065 629 771 3.1E-11 T 19-04-2016 IPR003018 GAF domain GO:0005515 ALIDE2_RS11575 8c63899869107c5b74284c082dd8d381 787 PANTHER PTHR21716 24 420 2.8E-45 T 19-04-2016 IPR002549 Transmembrane protein TqsA-like ALIDE2_RS11575 8c63899869107c5b74284c082dd8d381 787 Gene3D G3DSA:3.30.450.40 626 761 8.7E-22 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS11575 8c63899869107c5b74284c082dd8d381 787 SUPERFAMILY SSF55781 631 760 4.8E-27 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS11575 8c63899869107c5b74284c082dd8d381 787 Pfam PF13185 GAF domain 630 757 1.5E-14 T 19-04-2016 IPR003018 GAF domain GO:0005515 ALIDE2_RS04040 178f36410bc0fc9f28f9cd499dc005d3 265 SUPERFAMILY SSF53850 2 263 2.11E-69 T 19-04-2016 ALIDE2_RS04040 178f36410bc0fc9f28f9cd499dc005d3 265 SMART SM00079 39 261 8.1E-4 T 19-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 ALIDE2_RS04040 178f36410bc0fc9f28f9cd499dc005d3 265 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 62 75 - T 19-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 ALIDE2_RS04040 178f36410bc0fc9f28f9cd499dc005d3 265 PANTHER PTHR18966 40 260 1.0E-39 T 19-04-2016 ALIDE2_RS04040 178f36410bc0fc9f28f9cd499dc005d3 265 SMART SM00062 39 262 6.9E-66 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS04040 178f36410bc0fc9f28f9cd499dc005d3 265 PANTHER PTHR18966:SF191 40 260 1.0E-39 T 19-04-2016 ALIDE2_RS04040 178f36410bc0fc9f28f9cd499dc005d3 265 Gene3D G3DSA:3.40.190.10 39 116 1.9E-43 T 19-04-2016 ALIDE2_RS04040 178f36410bc0fc9f28f9cd499dc005d3 265 Gene3D G3DSA:3.40.190.10 223 263 1.9E-43 T 19-04-2016 ALIDE2_RS04040 178f36410bc0fc9f28f9cd499dc005d3 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 261 5.0E-67 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS04040 178f36410bc0fc9f28f9cd499dc005d3 265 Gene3D G3DSA:3.40.190.10 117 222 1.3E-27 T 19-04-2016 ALIDE2_RS00870 3e27328f8516d961a12b5cbc8624ca4e 249 Pfam PF09339 IclR helix-turn-helix domain 12 63 7.5E-9 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS00870 3e27328f8516d961a12b5cbc8624ca4e 249 SMART SM00346 10 101 4.5E-17 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS00870 3e27328f8516d961a12b5cbc8624ca4e 249 Gene3D G3DSA:3.30.450.40 80 241 3.0E-17 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00870 3e27328f8516d961a12b5cbc8624ca4e 249 SUPERFAMILY SSF46785 11 84 4.96E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00870 3e27328f8516d961a12b5cbc8624ca4e 249 PANTHER PTHR30136 8 243 3.6E-30 T 19-04-2016 ALIDE2_RS00870 3e27328f8516d961a12b5cbc8624ca4e 249 Gene3D G3DSA:1.10.10.10 8 79 4.4E-16 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00870 3e27328f8516d961a12b5cbc8624ca4e 249 SUPERFAMILY SSF55781 78 241 2.16E-18 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS02610 92c71bd74211f3ec8a17f62217d62c03 262 SMART SM00346 13 104 1.2E-12 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS02610 92c71bd74211f3ec8a17f62217d62c03 262 SUPERFAMILY SSF55781 81 258 1.44E-29 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS02610 92c71bd74211f3ec8a17f62217d62c03 262 PANTHER PTHR30136 10 258 3.4E-44 T 19-04-2016 ALIDE2_RS02610 92c71bd74211f3ec8a17f62217d62c03 262 Gene3D G3DSA:1.10.10.10 9 82 1.0E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02610 92c71bd74211f3ec8a17f62217d62c03 262 PANTHER PTHR30136:SF3 10 258 3.4E-44 T 19-04-2016 ALIDE2_RS02610 92c71bd74211f3ec8a17f62217d62c03 262 Pfam PF09339 IclR helix-turn-helix domain 15 67 3.9E-15 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS02610 92c71bd74211f3ec8a17f62217d62c03 262 Pfam PF01614 Bacterial transcriptional regulator 137 253 6.1E-11 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS02610 92c71bd74211f3ec8a17f62217d62c03 262 SUPERFAMILY SSF46785 14 84 4.5E-12 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02610 92c71bd74211f3ec8a17f62217d62c03 262 Gene3D G3DSA:3.30.450.40 83 260 2.0E-29 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS12280 542e47e601de345ec65e09e7b04baa5e 392 Gene3D G3DSA:3.40.630.10 8 200 4.1E-75 T 19-04-2016 ALIDE2_RS12280 542e47e601de345ec65e09e7b04baa5e 392 Gene3D G3DSA:3.40.630.10 329 387 4.1E-75 T 19-04-2016 ALIDE2_RS12280 542e47e601de345ec65e09e7b04baa5e 392 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 388 51.472 T 19-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 ALIDE2_RS12280 542e47e601de345ec65e09e7b04baa5e 392 SUPERFAMILY SSF53187 8 191 2.62E-62 T 19-04-2016 ALIDE2_RS12280 542e47e601de345ec65e09e7b04baa5e 392 SUPERFAMILY SSF53187 305 386 2.62E-62 T 19-04-2016 ALIDE2_RS12280 542e47e601de345ec65e09e7b04baa5e 392 Pfam PF01546 Peptidase family M20/M25/M40 76 385 1.9E-44 T 19-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 ALIDE2_RS12280 542e47e601de345ec65e09e7b04baa5e 392 Pfam PF07687 Peptidase dimerisation domain 188 295 7.9E-25 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS12280 542e47e601de345ec65e09e7b04baa5e 392 SUPERFAMILY SSF55031 192 301 3.74E-31 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS12280 542e47e601de345ec65e09e7b04baa5e 392 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 8 386 1.1E-151 T 19-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 ALIDE2_RS12280 542e47e601de345ec65e09e7b04baa5e 392 Gene3D G3DSA:3.30.70.360 201 301 3.9E-37 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS12280 542e47e601de345ec65e09e7b04baa5e 392 PANTHER PTHR11014 8 391 4.8E-85 T 19-04-2016 ALIDE2_RS05635 b3bae0f9fc9658674eead13a646bf2a8 240 PANTHER PTHR42208 1 229 4.5E-12 T 19-04-2016 ALIDE2_RS05635 b3bae0f9fc9658674eead13a646bf2a8 240 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 221 4.0E-35 T 19-04-2016 ALIDE2_RS05635 b3bae0f9fc9658674eead13a646bf2a8 240 PANTHER PTHR42208:SF1 1 229 4.5E-12 T 19-04-2016 ALIDE2_RS07350 2c1dbd443405da383b7840427211c545 153 SUPERFAMILY SSF54637 1 149 6.94E-43 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS07350 2c1dbd443405da383b7840427211c545 153 Gene3D G3DSA:3.10.129.10 2 147 5.9E-43 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS07350 2c1dbd443405da383b7840427211c545 153 Pfam PF01575 MaoC like domain 11 125 1.0E-18 T 19-04-2016 IPR002539 MaoC-like domain ALIDE2_RS07350 2c1dbd443405da383b7840427211c545 153 PANTHER PTHR13078 1 153 5.5E-62 T 19-04-2016 ALIDE2_RS03060 90d399086fc951ea5265018a5ab691df 146 Gene3D G3DSA:3.30.700.10 19 82 4.2E-5 T 19-04-2016 ALIDE2_RS03060 90d399086fc951ea5265018a5ab691df 146 PANTHER PTHR30093 12 146 1.9E-45 T 19-04-2016 ALIDE2_RS03060 90d399086fc951ea5265018a5ab691df 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 18 43 8.0E-14 T 19-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ALIDE2_RS03060 90d399086fc951ea5265018a5ab691df 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 54 72 8.0E-14 T 19-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ALIDE2_RS03060 90d399086fc951ea5265018a5ab691df 146 PANTHER PTHR30093:SF9 12 146 1.9E-45 T 19-04-2016 ALIDE2_RS03060 90d399086fc951ea5265018a5ab691df 146 SUPERFAMILY SSF54523 44 145 2.15E-35 T 19-04-2016 ALIDE2_RS03060 90d399086fc951ea5265018a5ab691df 146 Pfam PF08334 Type II secretion system (T2SS), protein G 41 146 1.1E-39 T 19-04-2016 IPR013545 Type II secretion system protein G ALIDE2_RS03060 90d399086fc951ea5265018a5ab691df 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03060 90d399086fc951ea5265018a5ab691df 146 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 17 145 9.2E-47 T 19-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 ALIDE2_RS03060 90d399086fc951ea5265018a5ab691df 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 38 2.3E-7 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03060 90d399086fc951ea5265018a5ab691df 146 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 14 37 2.5E-8 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS05245 e1688a4cdece7c478f3f8ac9eae16032 211 SUPERFAMILY SSF89155 17 209 6.02E-49 T 19-04-2016 IPR020945 DMSO/Nitrate reductase chaperone ALIDE2_RS05245 e1688a4cdece7c478f3f8ac9eae16032 211 Gene3D G3DSA:1.10.3480.10 18 209 1.1E-48 T 19-04-2016 IPR020945 DMSO/Nitrate reductase chaperone ALIDE2_RS05245 e1688a4cdece7c478f3f8ac9eae16032 211 PANTHER PTHR34227:SF4 1 210 1.4E-42 T 19-04-2016 ALIDE2_RS05245 e1688a4cdece7c478f3f8ac9eae16032 211 Pfam PF02613 Nitrate reductase delta subunit 60 177 4.3E-26 T 19-04-2016 IPR020945 DMSO/Nitrate reductase chaperone ALIDE2_RS05245 e1688a4cdece7c478f3f8ac9eae16032 211 PANTHER PTHR34227 1 210 1.4E-42 T 19-04-2016 ALIDE2_RS02260 8efaeb5c42a3865eb72a4ba0e96ad2d0 376 Gene3D G3DSA:3.40.640.10 21 263 3.4E-49 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS02260 8efaeb5c42a3865eb72a4ba0e96ad2d0 376 PIRSF PIRSF000524 17 375 3.5E-44 T 19-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 ALIDE2_RS02260 8efaeb5c42a3865eb72a4ba0e96ad2d0 376 Gene3D G3DSA:3.90.1150.10 268 373 3.6E-5 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS02260 8efaeb5c42a3865eb72a4ba0e96ad2d0 376 PANTHER PTHR21152 25 314 9.8E-59 T 19-04-2016 ALIDE2_RS02260 8efaeb5c42a3865eb72a4ba0e96ad2d0 376 PANTHER PTHR21152:SF21 25 314 9.8E-59 T 19-04-2016 ALIDE2_RS02260 8efaeb5c42a3865eb72a4ba0e96ad2d0 376 SUPERFAMILY SSF53383 10 373 5.54E-75 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS02260 8efaeb5c42a3865eb72a4ba0e96ad2d0 376 Pfam PF00266 Aminotransferase class-V 22 297 8.2E-17 T 19-04-2016 IPR000192 Aminotransferase class V domain ALIDE2_RS06945 728e9bffc719b2848390f3892889326e 278 PANTHER PTHR11820 1 278 6.3E-128 T 19-04-2016 ALIDE2_RS06945 728e9bffc719b2848390f3892889326e 278 SUPERFAMILY SSF56529 62 278 5.49E-77 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS06945 728e9bffc719b2848390f3892889326e 278 PANTHER PTHR11820:SF71 1 278 6.3E-128 T 19-04-2016 ALIDE2_RS06945 728e9bffc719b2848390f3892889326e 278 Gene3D G3DSA:3.90.850.10 66 278 2.6E-81 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS06945 728e9bffc719b2848390f3892889326e 278 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 73 278 6.5E-68 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS16620 076c09e695ec7fc3e742fbe64cff89d9 211 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 11 206 3.8E-70 T 19-04-2016 IPR014114 Type-F conjugative transfer system protein TraW ALIDE2_RS16620 076c09e695ec7fc3e742fbe64cff89d9 211 Pfam PF12477 Sex factor F TraW protein N terminal 8 36 1.3E-6 T 19-04-2016 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain ALIDE2_RS16065 ffa9c8f019b3cf80f788d3589e2fb7f3 285 SUPERFAMILY SSF103481 188 284 3.4E-13 T 19-04-2016 ALIDE2_RS16065 ffa9c8f019b3cf80f788d3589e2fb7f3 285 PANTHER PTHR12715 17 285 1.3E-31 T 19-04-2016 ALIDE2_RS16065 ffa9c8f019b3cf80f788d3589e2fb7f3 285 SUPERFAMILY SSF103481 49 142 1.44E-8 T 19-04-2016 ALIDE2_RS16065 ffa9c8f019b3cf80f788d3589e2fb7f3 285 Pfam PF00892 EamA-like transporter family 152 281 7.8E-13 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS16065 ffa9c8f019b3cf80f788d3589e2fb7f3 285 Pfam PF00892 EamA-like transporter family 18 139 2.2E-9 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS15370 234b484fe95bfc8dcca53aa3a2317ddd 207 PANTHER PTHR23293 1 186 6.7E-32 T 19-04-2016 ALIDE2_RS15370 234b484fe95bfc8dcca53aa3a2317ddd 207 PANTHER PTHR23293:SF5 1 186 6.7E-32 T 19-04-2016 ALIDE2_RS15370 234b484fe95bfc8dcca53aa3a2317ddd 207 SUPERFAMILY SSF52402 15 189 2.51E-38 T 19-04-2016 ALIDE2_RS15370 234b484fe95bfc8dcca53aa3a2317ddd 207 Gene3D G3DSA:3.40.50.620 14 186 2.8E-36 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS15370 234b484fe95bfc8dcca53aa3a2317ddd 207 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 41 186 3.2E-25 T 19-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 ALIDE2_RS22470 a73d9087959585d1b0bd519faddc5f56 248 PANTHER PTHR21392 3 247 2.6E-101 T 19-04-2016 ALIDE2_RS22470 a73d9087959585d1b0bd519faddc5f56 248 PANTHER PTHR21392:SF1 3 247 2.6E-101 T 19-04-2016 ALIDE2_RS22470 a73d9087959585d1b0bd519faddc5f56 248 SMART SM01144 27 229 2.0E-73 T 19-04-2016 IPR005636 DTW ALIDE2_RS22470 a73d9087959585d1b0bd519faddc5f56 248 Pfam PF03942 DTW domain 29 223 4.6E-40 T 19-04-2016 IPR005636 DTW ALIDE2_RS14140 48198aadcd8713f9f27405049e1f116d 196 PANTHER PTHR33567 20 195 7.6E-25 T 19-04-2016 ALIDE2_RS14140 48198aadcd8713f9f27405049e1f116d 196 Pfam PF02417 Chromate transporter 22 185 1.1E-29 T 19-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 ALIDE2_RS15070 6d039832f0dcb34dd7a57d9e414b32af 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.9E-19 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15070 6d039832f0dcb34dd7a57d9e414b32af 301 SUPERFAMILY SSF46785 3 113 1.43E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15070 6d039832f0dcb34dd7a57d9e414b32af 301 PANTHER PTHR30419 1 296 2.8E-77 T 19-04-2016 ALIDE2_RS15070 6d039832f0dcb34dd7a57d9e414b32af 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 7.0E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15070 6d039832f0dcb34dd7a57d9e414b32af 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 7.0E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15070 6d039832f0dcb34dd7a57d9e414b32af 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 7.0E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15070 6d039832f0dcb34dd7a57d9e414b32af 301 PANTHER PTHR30419:SF3 1 296 2.8E-77 T 19-04-2016 ALIDE2_RS15070 6d039832f0dcb34dd7a57d9e414b32af 301 Gene3D G3DSA:1.10.10.10 5 87 2.8E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15070 6d039832f0dcb34dd7a57d9e414b32af 301 Pfam PF03466 LysR substrate binding domain 91 296 1.3E-45 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS15070 6d039832f0dcb34dd7a57d9e414b32af 301 SUPERFAMILY SSF53850 92 297 1.48E-44 T 19-04-2016 ALIDE2_RS15070 6d039832f0dcb34dd7a57d9e414b32af 301 Gene3D G3DSA:3.40.190.10 175 264 5.4E-22 T 19-04-2016 ALIDE2_RS15070 6d039832f0dcb34dd7a57d9e414b32af 301 Gene3D G3DSA:3.40.190.10 92 174 7.0E-19 T 19-04-2016 ALIDE2_RS14220 04acc66d67e6931bae0b318ba579e0fa 409 SUPERFAMILY SSF53383 27 405 1.99E-78 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS14220 04acc66d67e6931bae0b318ba579e0fa 409 Gene3D G3DSA:3.90.1150.10 266 406 7.3E-27 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS14220 04acc66d67e6931bae0b318ba579e0fa 409 Gene3D G3DSA:3.40.640.10 10 263 1.2E-70 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS14220 04acc66d67e6931bae0b318ba579e0fa 409 PANTHER PTHR11808 11 408 1.1E-89 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS14220 04acc66d67e6931bae0b318ba579e0fa 409 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 11 404 7.0E-76 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS14220 04acc66d67e6931bae0b318ba579e0fa 409 PIRSF PIRSF001434 1 406 1.1E-101 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 ALIDE2_RS02245 7fed9ed7129361e3ebe428b811720fe9 209 PANTHER PTHR24567 72 209 7.2E-15 T 19-04-2016 ALIDE2_RS02245 7fed9ed7129361e3ebe428b811720fe9 209 Gene3D G3DSA:2.60.120.10 73 197 6.7E-23 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS02245 7fed9ed7129361e3ebe428b811720fe9 209 SUPERFAMILY SSF51206 74 198 4.98E-23 T 19-04-2016 IPR018490 Cyclic nucleotide-binding-like ALIDE2_RS02245 7fed9ed7129361e3ebe428b811720fe9 209 Pfam PF00027 Cyclic nucleotide-binding domain 94 178 1.3E-13 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS02245 7fed9ed7129361e3ebe428b811720fe9 209 SMART SM00100 72 193 6.9E-12 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain ALIDE2_RS07230 dea5d217c7a219257bb32f8eded6920a 217 PANTHER PTHR30128 69 211 4.3E-24 T 19-04-2016 ALIDE2_RS07230 dea5d217c7a219257bb32f8eded6920a 217 Pfam PF00691 OmpA family 96 202 3.3E-19 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS07230 dea5d217c7a219257bb32f8eded6920a 217 SUPERFAMILY SSF103088 84 206 6.8E-27 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS07230 dea5d217c7a219257bb32f8eded6920a 217 Gene3D G3DSA:3.30.1330.60 83 206 2.1E-30 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS21050 1288375f46c925ae4f72150c13b78377 362 SUPERFAMILY SSF102198 180 361 9.81E-10 T 19-04-2016 ALIDE2_RS21050 1288375f46c925ae4f72150c13b78377 362 Gene3D G3DSA:3.50.30.50 88 131 8.3E-20 T 19-04-2016 ALIDE2_RS21050 1288375f46c925ae4f72150c13b78377 362 Gene3D G3DSA:3.50.30.50 186 361 8.3E-20 T 19-04-2016 ALIDE2_RS21050 1288375f46c925ae4f72150c13b78377 362 Pfam PF04199 Putative cyclase 97 287 3.5E-12 T 19-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 ALIDE2_RS21050 1288375f46c925ae4f72150c13b78377 362 PANTHER PTHR34861:SF5 7 150 1.1E-51 T 19-04-2016 ALIDE2_RS21050 1288375f46c925ae4f72150c13b78377 362 PANTHER PTHR34861:SF5 174 362 1.1E-51 T 19-04-2016 ALIDE2_RS21050 1288375f46c925ae4f72150c13b78377 362 PANTHER PTHR34861 7 150 1.1E-51 T 19-04-2016 ALIDE2_RS21050 1288375f46c925ae4f72150c13b78377 362 PANTHER PTHR34861 174 362 1.1E-51 T 19-04-2016 ALIDE2_RS06265 e53e0c233ee555a234cfb6391ab1740d 261 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 73 233 1.4E-8 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 ALIDE2_RS06265 e53e0c233ee555a234cfb6391ab1740d 261 PANTHER PTHR21091:SF18 98 202 2.1E-18 T 19-04-2016 ALIDE2_RS06265 e53e0c233ee555a234cfb6391ab1740d 261 Gene3D G3DSA:3.30.950.10 145 243 2.0E-22 T 19-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 ALIDE2_RS06265 e53e0c233ee555a234cfb6391ab1740d 261 SUPERFAMILY SSF53790 8 245 5.23E-54 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 ALIDE2_RS06265 e53e0c233ee555a234cfb6391ab1740d 261 PANTHER PTHR21091 98 202 2.1E-18 T 19-04-2016 ALIDE2_RS03790 e3be286538a01a14e2f6d68656802f89 149 Gene3D G3DSA:2.20.25.10 1 38 2.0E-15 T 19-04-2016 ALIDE2_RS03790 e3be286538a01a14e2f6d68656802f89 149 SUPERFAMILY SSF82784 1 148 1.96E-35 T 19-04-2016 IPR003718 OsmC/Ohr family ALIDE2_RS03790 e3be286538a01a14e2f6d68656802f89 149 Pfam PF02566 OsmC-like protein 44 142 1.5E-14 T 19-04-2016 IPR003718 OsmC/Ohr family ALIDE2_RS03790 e3be286538a01a14e2f6d68656802f89 149 Gene3D G3DSA:3.30.300.20 50 147 8.0E-39 T 19-04-2016 IPR015946 K homology domain-like, alpha/beta ALIDE2_RS03790 e3be286538a01a14e2f6d68656802f89 149 PANTHER PTHR34352 4 149 7.6E-33 T 19-04-2016 ALIDE2_RS07460 b5a398b89a1ad4a6bd39278b2f1af35e 335 PIRSF PIRSF017082 4 334 1.6E-52 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS07460 b5a398b89a1ad4a6bd39278b2f1af35e 335 PANTHER PTHR30349 5 297 1.4E-45 T 19-04-2016 ALIDE2_RS07460 b5a398b89a1ad4a6bd39278b2f1af35e 335 SUPERFAMILY SSF53850 126 295 1.52E-5 T 19-04-2016 ALIDE2_RS07460 b5a398b89a1ad4a6bd39278b2f1af35e 335 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 57 331 2.9E-44 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS07460 b5a398b89a1ad4a6bd39278b2f1af35e 335 PANTHER PTHR30349:SF1 5 297 1.4E-45 T 19-04-2016 ALIDE2_RS20590 68cba0266b54ca9580c39ebbcaa065c8 536 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS20590 68cba0266b54ca9580c39ebbcaa065c8 536 SUPERFAMILY SSF51905 477 535 9.07E-79 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS20590 68cba0266b54ca9580c39ebbcaa065c8 536 SUPERFAMILY SSF51905 3 290 9.07E-79 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS20590 68cba0266b54ca9580c39ebbcaa065c8 536 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 256 270 - T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS20590 68cba0266b54ca9580c39ebbcaa065c8 536 Pfam PF05199 GMC oxidoreductase 392 530 7.8E-42 T 19-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 ALIDE2_RS20590 68cba0266b54ca9580c39ebbcaa065c8 536 Gene3D G3DSA:3.50.50.60 2 126 9.2E-109 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS20590 68cba0266b54ca9580c39ebbcaa065c8 536 Gene3D G3DSA:3.50.50.60 471 535 9.2E-109 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS20590 68cba0266b54ca9580c39ebbcaa065c8 536 Gene3D G3DSA:3.50.50.60 188 315 9.2E-109 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS20590 68cba0266b54ca9580c39ebbcaa065c8 536 PIRSF PIRSF000137 1 536 3.1E-147 T 19-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 ALIDE2_RS20590 68cba0266b54ca9580c39ebbcaa065c8 536 PANTHER PTHR11552 3 535 7.5E-186 T 19-04-2016 ALIDE2_RS20590 68cba0266b54ca9580c39ebbcaa065c8 536 Pfam PF00732 GMC oxidoreductase 5 297 6.4E-76 T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS20590 68cba0266b54ca9580c39ebbcaa065c8 536 SUPERFAMILY SSF54373 292 478 2.65E-44 T 19-04-2016 ALIDE2_RS00755 2da623cf48386cb2f3140f07f581d4ba 388 Gene3D G3DSA:1.10.540.10 6 118 7.2E-34 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00755 2da623cf48386cb2f3140f07f581d4ba 388 PANTHER PTHR10909 7 388 2.9E-269 T 19-04-2016 ALIDE2_RS00755 2da623cf48386cb2f3140f07f581d4ba 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 220 3.9E-22 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS00755 2da623cf48386cb2f3140f07f581d4ba 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 117 2.2E-26 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00755 2da623cf48386cb2f3140f07f581d4ba 388 Gene3D G3DSA:2.40.110.10 122 222 8.0E-31 T 19-04-2016 ALIDE2_RS00755 2da623cf48386cb2f3140f07f581d4ba 388 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS00755 2da623cf48386cb2f3140f07f581d4ba 388 PANTHER PTHR10909:SF285 7 388 2.9E-269 T 19-04-2016 ALIDE2_RS00755 2da623cf48386cb2f3140f07f581d4ba 388 SUPERFAMILY SSF56645 6 245 2.36E-61 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS00755 2da623cf48386cb2f3140f07f581d4ba 388 Gene3D G3DSA:1.20.140.10 223 387 6.4E-54 T 19-04-2016 ALIDE2_RS00755 2da623cf48386cb2f3140f07f581d4ba 388 SUPERFAMILY SSF47203 231 386 2.26E-43 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00755 2da623cf48386cb2f3140f07f581d4ba 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 366 6.7E-34 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS07290 f851a4758be2ca84d297e9c25b2591c2 292 Gene3D G3DSA:1.10.600.10 23 290 1.0E-49 T 19-04-2016 IPR008949 Isoprenoid synthase domain ALIDE2_RS07290 f851a4758be2ca84d297e9c25b2591c2 292 Pfam PF00494 Squalene/phytoene synthase 21 277 2.3E-50 T 19-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 ALIDE2_RS07290 f851a4758be2ca84d297e9c25b2591c2 292 TIGRFAM TIGR03464 HpnC: squalene synthase HpnC 19 290 6.4E-93 T 19-04-2016 IPR017827 Squalene synthase HpnC ALIDE2_RS07290 f851a4758be2ca84d297e9c25b2591c2 292 PANTHER PTHR31480:SF8 23 290 5.0E-50 T 19-04-2016 ALIDE2_RS07290 f851a4758be2ca84d297e9c25b2591c2 292 PANTHER PTHR31480 23 290 5.0E-50 T 19-04-2016 ALIDE2_RS07290 f851a4758be2ca84d297e9c25b2591c2 292 SUPERFAMILY SSF48576 20 292 2.73E-60 T 19-04-2016 IPR008949 Isoprenoid synthase domain ALIDE2_RS06485 ccc788e737c11cc8d052d7dea1d3bc03 422 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 58 388 8.6E-51 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS06485 ccc788e737c11cc8d052d7dea1d3bc03 422 PANTHER PTHR10314:SF3 11 399 2.7E-228 T 19-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 ALIDE2_RS06485 ccc788e737c11cc8d052d7dea1d3bc03 422 SUPERFAMILY SSF53686 7 399 3.93E-144 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS06485 ccc788e737c11cc8d052d7dea1d3bc03 422 PIRSF PIRSF001413 2 407 3.6E-163 T 19-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 ALIDE2_RS06485 ccc788e737c11cc8d052d7dea1d3bc03 422 Gene3D G3DSA:3.40.50.1100 182 403 5.7E-96 T 19-04-2016 ALIDE2_RS06485 ccc788e737c11cc8d052d7dea1d3bc03 422 PANTHER PTHR10314 11 399 2.7E-228 T 19-04-2016 ALIDE2_RS06485 ccc788e737c11cc8d052d7dea1d3bc03 422 Gene3D G3DSA:3.40.50.1100 102 181 5.2E-22 T 19-04-2016 ALIDE2_RS06485 ccc788e737c11cc8d052d7dea1d3bc03 422 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 6 401 52.11 T 19-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 ALIDE2_RS06485 ccc788e737c11cc8d052d7dea1d3bc03 422 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 85 99 - T 19-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 ALIDE2_RS06485 ccc788e737c11cc8d052d7dea1d3bc03 422 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 11 399 1.2E-187 T 19-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 ALIDE2_RS02390 be0fa8981b1b57a4ffd0483141509d8e 691 Pfam PF01568 Molydopterin dinucleotide binding domain 572 682 6.0E-21 T 19-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 ALIDE2_RS02390 be0fa8981b1b57a4ffd0483141509d8e 691 PANTHER PTHR11615:SF127 15 686 1.3E-184 T 19-04-2016 ALIDE2_RS02390 be0fa8981b1b57a4ffd0483141509d8e 691 Gene3D G3DSA:2.40.40.20 550 687 1.2E-37 T 19-04-2016 ALIDE2_RS02390 be0fa8981b1b57a4ffd0483141509d8e 691 SUPERFAMILY SSF50692 530 686 7.69E-37 T 19-04-2016 IPR009010 Aspartate decarboxylase-like domain ALIDE2_RS02390 be0fa8981b1b57a4ffd0483141509d8e 691 SMART SM00926 14 69 7.4E-16 T 19-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 ALIDE2_RS02390 be0fa8981b1b57a4ffd0483141509d8e 691 Pfam PF00384 Molybdopterin oxidoreductase 72 482 2.3E-47 T 19-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS02390 be0fa8981b1b57a4ffd0483141509d8e 691 Gene3D G3DSA:3.40.228.10 149 333 1.3E-63 T 19-04-2016 ALIDE2_RS02390 be0fa8981b1b57a4ffd0483141509d8e 691 Gene3D G3DSA:2.20.25.90 15 72 4.6E-13 T 19-04-2016 ALIDE2_RS02390 be0fa8981b1b57a4ffd0483141509d8e 691 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 16 68 4.2E-9 T 19-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 ALIDE2_RS02390 be0fa8981b1b57a4ffd0483141509d8e 691 Gene3D G3DSA:3.40.50.740 334 543 2.9E-48 T 19-04-2016 ALIDE2_RS02390 be0fa8981b1b57a4ffd0483141509d8e 691 Gene3D G3DSA:3.40.50.740 73 148 2.9E-48 T 19-04-2016 ALIDE2_RS02390 be0fa8981b1b57a4ffd0483141509d8e 691 SUPERFAMILY SSF53706 16 573 9.42E-159 T 19-04-2016 ALIDE2_RS02390 be0fa8981b1b57a4ffd0483141509d8e 691 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 427 444 - T 19-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 ALIDE2_RS02390 be0fa8981b1b57a4ffd0483141509d8e 691 PANTHER PTHR11615 15 686 1.3E-184 T 19-04-2016 ALIDE2_RS01755 d3de122db76cc4cc5d9d372ca95583e6 103 SUPERFAMILY SSF54999 5 102 7.46E-37 T 19-04-2016 IPR027486 Ribosomal protein S10 domain ALIDE2_RS01755 d3de122db76cc4cc5d9d372ca95583e6 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.264 T 19-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01755 d3de122db76cc4cc5d9d372ca95583e6 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 19-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01755 d3de122db76cc4cc5d9d372ca95583e6 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 5.5E-45 T 19-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01755 d3de122db76cc4cc5d9d372ca95583e6 103 SMART SM01403 7 101 7.2E-54 T 19-04-2016 IPR027486 Ribosomal protein S10 domain ALIDE2_RS01755 d3de122db76cc4cc5d9d372ca95583e6 103 Gene3D G3DSA:3.30.70.600 4 102 4.0E-42 T 19-04-2016 IPR027486 Ribosomal protein S10 domain ALIDE2_RS01755 d3de122db76cc4cc5d9d372ca95583e6 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.8E-17 T 19-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01755 d3de122db76cc4cc5d9d372ca95583e6 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.8E-17 T 19-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01755 d3de122db76cc4cc5d9d372ca95583e6 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.8E-17 T 19-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01755 d3de122db76cc4cc5d9d372ca95583e6 103 PANTHER PTHR11700 1 102 7.4E-46 T 19-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01755 d3de122db76cc4cc5d9d372ca95583e6 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.2E-34 T 19-04-2016 IPR027486 Ribosomal protein S10 domain ALIDE2_RS03430 527d356d494394f353335c5cc6a7b28c 480 SUPERFAMILY SSF53448 1 291 2.94E-63 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS03430 527d356d494394f353335c5cc6a7b28c 480 SUPERFAMILY SSF51182 187 480 3.34E-84 T 19-04-2016 IPR011051 RmlC-like cupin domain ALIDE2_RS03430 527d356d494394f353335c5cc6a7b28c 480 Pfam PF01050 Mannose-6-phosphate isomerase 326 476 1.8E-71 T 19-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 ALIDE2_RS03430 527d356d494394f353335c5cc6a7b28c 480 PANTHER PTHR12526 155 300 9.3E-102 T 19-04-2016 ALIDE2_RS03430 527d356d494394f353335c5cc6a7b28c 480 PANTHER PTHR12526 363 480 9.3E-102 T 19-04-2016 ALIDE2_RS03430 527d356d494394f353335c5cc6a7b28c 480 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3 480 2.5E-202 T 19-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 ALIDE2_RS03430 527d356d494394f353335c5cc6a7b28c 480 PANTHER PTHR12526:SF357 155 300 9.3E-102 T 19-04-2016 ALIDE2_RS03430 527d356d494394f353335c5cc6a7b28c 480 PANTHER PTHR12526:SF357 363 480 9.3E-102 T 19-04-2016 ALIDE2_RS03430 527d356d494394f353335c5cc6a7b28c 480 Gene3D G3DSA:3.90.550.10 3 282 8.5E-98 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS03430 527d356d494394f353335c5cc6a7b28c 480 Gene3D G3DSA:2.60.120.10 368 480 2.1E-47 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS03430 527d356d494394f353335c5cc6a7b28c 480 Pfam PF00483 Nucleotidyl transferase 5 297 3.9E-63 T 19-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 16 691 3.3E-201 T 19-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 PANTHER PTHR23355:SF9 561 741 2.3E-226 T 19-04-2016 ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 PANTHER PTHR23355:SF9 21 526 2.3E-226 T 19-04-2016 ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 Pfam PF00575 S1 RNA binding domain 610 688 4.6E-11 T 19-04-2016 IPR003029 S1 domain GO:0003676 ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 SMART SM00955 196 528 2.5E-176 T 19-04-2016 ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 Pfam PF08206 Ribonuclease B OB domain 23 80 1.8E-22 T 19-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 PANTHER PTHR23355 561 741 2.3E-226 T 19-04-2016 ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 PANTHER PTHR23355 21 526 2.3E-226 T 19-04-2016 ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 SUPERFAMILY SSF50249 567 608 2.34E-138 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 SUPERFAMILY SSF50249 156 529 2.34E-138 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 ProSitePatterns PS01175 Ribonuclease II family signature. 495 519 - T 19-04-2016 IPR022966 Ribonuclease II/R, conserved site ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 SMART SM00357 22 81 2.8E-12 T 19-04-2016 IPR011129 Cold shock protein GO:0003676 ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 SUPERFAMILY SSF50249 610 690 1.95E-19 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 Hamap MF_01895 Ribonuclease R [rnr]. 5 691 54.122 T 19-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 SUPERFAMILY SSF50249 74 173 4.71E-19 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 SMART SM00316 608 691 9.5E-13 T 19-04-2016 IPR022967 RNA-binding domain, S1 ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 SMART SM00316 16 78 10.0 T 19-04-2016 IPR022967 RNA-binding domain, S1 ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 TIGRFAM TIGR02063 RNase_R: ribonuclease R 12 532 2.2E-192 T 19-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 SUPERFAMILY SSF50249 15 83 1.03E-17 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 Gene3D G3DSA:2.40.50.140 610 690 6.7E-18 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS10630 0838ed1181c792a99bae1768dd7447bf 763 Pfam PF00773 RNB domain 196 527 1.6E-103 T 19-04-2016 ALIDE2_RS06975 6219ac3db06cf27ab2fc584954adad17 531 PANTHER PTHR22953 216 321 2.2E-99 T 19-04-2016 ALIDE2_RS06975 6219ac3db06cf27ab2fc584954adad17 531 PANTHER PTHR22953 44 199 2.2E-99 T 19-04-2016 ALIDE2_RS06975 6219ac3db06cf27ab2fc584954adad17 531 PANTHER PTHR22953 350 382 2.2E-99 T 19-04-2016 ALIDE2_RS06975 6219ac3db06cf27ab2fc584954adad17 531 Pfam PF09423 PhoD-like phosphatase 156 499 4.1E-101 T 19-04-2016 IPR018946 Alkaline phosphatase D-related ALIDE2_RS06975 6219ac3db06cf27ab2fc584954adad17 531 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 47 143 2.4E-31 T 19-04-2016 IPR032093 Phospholipase D, N-terminal ALIDE2_RS06975 6219ac3db06cf27ab2fc584954adad17 531 Gene3D G3DSA:3.60.21.10 164 433 1.2E-7 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS06975 6219ac3db06cf27ab2fc584954adad17 531 PANTHER PTHR22953:SF28 216 321 2.2E-99 T 19-04-2016 ALIDE2_RS06975 6219ac3db06cf27ab2fc584954adad17 531 PANTHER PTHR22953:SF28 44 199 2.2E-99 T 19-04-2016 ALIDE2_RS06975 6219ac3db06cf27ab2fc584954adad17 531 PANTHER PTHR22953:SF28 350 382 2.2E-99 T 19-04-2016 ALIDE2_RS06975 6219ac3db06cf27ab2fc584954adad17 531 SUPERFAMILY SSF56300 352 497 9.49E-28 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS06975 6219ac3db06cf27ab2fc584954adad17 531 SUPERFAMILY SSF56300 153 321 9.49E-28 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS00495 b465cbe959b102d20190af13898b8b3e 258 PRINTS PR00412 Epoxide hydrolase signature 228 250 8.4E-9 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS00495 b465cbe959b102d20190af13898b8b3e 258 PRINTS PR00412 Epoxide hydrolase signature 83 96 8.4E-9 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS00495 b465cbe959b102d20190af13898b8b3e 258 PRINTS PR00412 Epoxide hydrolase signature 40 55 8.4E-9 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS00495 b465cbe959b102d20190af13898b8b3e 258 SUPERFAMILY SSF53474 10 252 2.94E-56 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS00495 b465cbe959b102d20190af13898b8b3e 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 5.9E-15 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS00495 b465cbe959b102d20190af13898b8b3e 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 40 55 5.9E-15 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS00495 b465cbe959b102d20190af13898b8b3e 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 96 5.9E-15 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS00495 b465cbe959b102d20190af13898b8b3e 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 197 211 5.9E-15 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS00495 b465cbe959b102d20190af13898b8b3e 258 Pfam PF12697 Alpha/beta hydrolase family 16 243 3.0E-20 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS00495 b465cbe959b102d20190af13898b8b3e 258 PANTHER PTHR10992 11 253 2.7E-47 T 19-04-2016 ALIDE2_RS00495 b465cbe959b102d20190af13898b8b3e 258 Gene3D G3DSA:3.40.50.1820 10 252 3.7E-54 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS13800 86054df0204923e39712d557741c8d75 865 Pfam PF04851 Type III restriction enzyme, res subunit 30 161 5.4E-12 T 19-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ALIDE2_RS13800 86054df0204923e39712d557741c8d75 865 SMART SM00487 27 214 5.0E-15 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS13800 86054df0204923e39712d557741c8d75 865 Gene3D G3DSA:3.40.50.300 16 184 4.9E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13800 86054df0204923e39712d557741c8d75 865 SMART SM00491 368 478 0.0017 T 19-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ALIDE2_RS13800 86054df0204923e39712d557741c8d75 865 SUPERFAMILY SSF52540 17 184 5.86E-24 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13800 86054df0204923e39712d557741c8d75 865 Pfam PF13307 Helicase C-terminal domain 355 472 1.8E-7 T 19-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ALIDE2_RS22975 cee985be60fdfb38725f7bede77ab086 314 SUPERFAMILY SSF46785 1 108 1.9E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22975 cee985be60fdfb38725f7bede77ab086 314 Gene3D G3DSA:3.40.190.10 195 270 9.4E-17 T 19-04-2016 ALIDE2_RS22975 cee985be60fdfb38725f7bede77ab086 314 SUPERFAMILY SSF53850 87 300 1.43E-33 T 19-04-2016 ALIDE2_RS22975 cee985be60fdfb38725f7bede77ab086 314 PANTHER PTHR30293 1 314 3.8E-104 T 19-04-2016 ALIDE2_RS22975 cee985be60fdfb38725f7bede77ab086 314 Gene3D G3DSA:1.10.10.10 1 85 3.9E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22975 cee985be60fdfb38725f7bede77ab086 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.7E-19 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22975 cee985be60fdfb38725f7bede77ab086 314 Pfam PF03466 LysR substrate binding domain 85 290 9.8E-35 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS22975 cee985be60fdfb38725f7bede77ab086 314 Gene3D G3DSA:3.40.190.10 87 194 7.9E-24 T 19-04-2016 ALIDE2_RS22975 cee985be60fdfb38725f7bede77ab086 314 PANTHER PTHR30293:SF0 1 314 3.8E-104 T 19-04-2016 ALIDE2_RS14260 1a9a15b4b464fafb0a1044a6aacde68f 304 Gene3D G3DSA:3.40.190.10 183 245 3.1E-5 T 19-04-2016 ALIDE2_RS14260 1a9a15b4b464fafb0a1044a6aacde68f 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.9E-16 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS14260 1a9a15b4b464fafb0a1044a6aacde68f 304 PANTHER PTHR30579 1 291 3.9E-70 T 19-04-2016 ALIDE2_RS14260 1a9a15b4b464fafb0a1044a6aacde68f 304 Gene3D G3DSA:3.40.190.10 94 182 3.1E-17 T 19-04-2016 ALIDE2_RS14260 1a9a15b4b464fafb0a1044a6aacde68f 304 Pfam PF03466 LysR substrate binding domain 89 287 2.0E-32 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS14260 1a9a15b4b464fafb0a1044a6aacde68f 304 SUPERFAMILY SSF46785 1 113 2.5E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14260 1a9a15b4b464fafb0a1044a6aacde68f 304 PANTHER PTHR30579:SF3 1 291 3.9E-70 T 19-04-2016 ALIDE2_RS14260 1a9a15b4b464fafb0a1044a6aacde68f 304 Gene3D G3DSA:1.10.10.10 1 80 1.3E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14260 1a9a15b4b464fafb0a1044a6aacde68f 304 SUPERFAMILY SSF53850 90 290 3.08E-33 T 19-04-2016 ALIDE2_RS12475 4c3605435910eb211de00b752fa8eedc 338 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 61 334 3.3E-81 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12475 4c3605435910eb211de00b752fa8eedc 338 PIRSF PIRSF017082 3 338 4.9E-78 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12475 4c3605435910eb211de00b752fa8eedc 338 SUPERFAMILY SSF53850 70 297 5.43E-14 T 19-04-2016 ALIDE2_RS12475 4c3605435910eb211de00b752fa8eedc 338 PANTHER PTHR30349:SF32 38 338 3.3E-89 T 19-04-2016 ALIDE2_RS12475 4c3605435910eb211de00b752fa8eedc 338 PANTHER PTHR30349 38 338 3.3E-89 T 19-04-2016 ALIDE2_RS12860 e04a95d774dad6a43cffb61f08c2e3cb 145 Gene3D G3DSA:3.10.580.10 2 124 1.6E-34 T 19-04-2016 ALIDE2_RS12860 e04a95d774dad6a43cffb61f08c2e3cb 145 PANTHER PTHR11911 1 143 1.1E-33 T 19-04-2016 ALIDE2_RS12860 e04a95d774dad6a43cffb61f08c2e3cb 145 SMART SM00116 15 62 1.2E-4 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS12860 e04a95d774dad6a43cffb61f08c2e3cb 145 SMART SM00116 80 127 2.1E-8 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS12860 e04a95d774dad6a43cffb61f08c2e3cb 145 SUPERFAMILY SSF54631 3 142 4.42E-34 T 19-04-2016 ALIDE2_RS12860 e04a95d774dad6a43cffb61f08c2e3cb 145 Pfam PF00571 CBS domain 14 61 7.5E-9 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS12860 e04a95d774dad6a43cffb61f08c2e3cb 145 Pfam PF00571 CBS domain 73 125 7.5E-13 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS11735 37870121905e4c095a242051a88c0ec8 257 PANTHER PTHR30346:SF0 8 242 4.2E-47 T 19-04-2016 ALIDE2_RS11735 37870121905e4c095a242051a88c0ec8 257 Gene3D G3DSA:3.40.190.10 106 197 8.8E-25 T 19-04-2016 ALIDE2_RS11735 37870121905e4c095a242051a88c0ec8 257 Gene3D G3DSA:3.40.190.10 22 105 5.6E-29 T 19-04-2016 ALIDE2_RS11735 37870121905e4c095a242051a88c0ec8 257 PANTHER PTHR30346 8 242 4.2E-47 T 19-04-2016 ALIDE2_RS11735 37870121905e4c095a242051a88c0ec8 257 SUPERFAMILY SSF53850 20 223 1.52E-35 T 19-04-2016 ALIDE2_RS11735 37870121905e4c095a242051a88c0ec8 257 Pfam PF03466 LysR substrate binding domain 20 217 9.8E-38 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS01785 f252d0950ea7a8431ee9a8d387fd70a2 110 SUPERFAMILY SSF54843 4 109 3.4E-39 T 19-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01785 f252d0950ea7a8431ee9a8d387fd70a2 110 Pfam PF00237 Ribosomal protein L22p/L17e 10 108 7.8E-33 T 19-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01785 f252d0950ea7a8431ee9a8d387fd70a2 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 6 108 6.8E-45 T 19-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS01785 f252d0950ea7a8431ee9a8d387fd70a2 110 Gene3D G3DSA:3.90.470.10 3 109 1.2E-40 T 19-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01785 f252d0950ea7a8431ee9a8d387fd70a2 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 84 108 - T 19-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01785 f252d0950ea7a8431ee9a8d387fd70a2 110 PANTHER PTHR13501 3 108 2.5E-46 T 19-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS01785 f252d0950ea7a8431ee9a8d387fd70a2 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 2 110 24.617 T 19-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS21285 e59ff0de6c16244af175d2c55bee4ae0 626 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 344 3.1E-43 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS21285 e59ff0de6c16244af175d2c55bee4ae0 626 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 123 614 2.1E-204 T 19-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 ALIDE2_RS21285 e59ff0de6c16244af175d2c55bee4ae0 626 Pfam PF01434 Peptidase family M41 406 613 2.7E-66 T 19-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 ALIDE2_RS21285 e59ff0de6c16244af175d2c55bee4ae0 626 Gene3D G3DSA:3.40.50.300 171 353 6.4E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21285 e59ff0de6c16244af175d2c55bee4ae0 626 SUPERFAMILY SSF140990 426 618 1.26E-62 T 19-04-2016 ALIDE2_RS21285 e59ff0de6c16244af175d2c55bee4ae0 626 PANTHER PTHR23076 15 613 2.8E-267 T 19-04-2016 ALIDE2_RS21285 e59ff0de6c16244af175d2c55bee4ae0 626 PANTHER PTHR23076:SF10 15 613 2.8E-267 T 19-04-2016 ALIDE2_RS21285 e59ff0de6c16244af175d2c55bee4ae0 626 SMART SM00382 207 347 6.2E-25 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS21285 e59ff0de6c16244af175d2c55bee4ae0 626 SUPERFAMILY SSF52540 169 415 3.51E-67 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21285 e59ff0de6c16244af175d2c55bee4ae0 626 ProSitePatterns PS00674 AAA-protein family signature. 315 333 - T 19-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 ALIDE2_RS21285 e59ff0de6c16244af175d2c55bee4ae0 626 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 23 621 35.043 T 19-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 ALIDE2_RS21285 e59ff0de6c16244af175d2c55bee4ae0 626 Pfam PF06480 FtsH Extracellular 27 77 1.1E-5 T 19-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 ALIDE2_RS21285 e59ff0de6c16244af175d2c55bee4ae0 626 Gene3D G3DSA:1.10.8.60 354 420 4.2E-25 T 19-04-2016 ALIDE2_RS12665 8f7f256631cbd5eef28bd1e6282be53e 377 SUPERFAMILY SSF101790 289 376 5.23E-24 T 19-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain ALIDE2_RS12665 8f7f256631cbd5eef28bd1e6282be53e 377 PANTHER PTHR13847 11 370 8.8E-153 T 19-04-2016 ALIDE2_RS12665 8f7f256631cbd5eef28bd1e6282be53e 377 Gene3D G3DSA:3.30.1360.120 9 60 4.2E-54 T 19-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ALIDE2_RS12665 8f7f256631cbd5eef28bd1e6282be53e 377 Gene3D G3DSA:3.30.1360.120 149 236 4.2E-54 T 19-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ALIDE2_RS12665 8f7f256631cbd5eef28bd1e6282be53e 377 PANTHER PTHR13847:SF209 11 370 8.8E-153 T 19-04-2016 ALIDE2_RS12665 8f7f256631cbd5eef28bd1e6282be53e 377 Gene3D G3DSA:3.30.70.1400 61 146 2.8E-28 T 19-04-2016 ALIDE2_RS12665 8f7f256631cbd5eef28bd1e6282be53e 377 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 9 370 2.8E-99 T 19-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ALIDE2_RS12665 8f7f256631cbd5eef28bd1e6282be53e 377 Gene3D G3DSA:2.40.30.110 291 376 1.6E-24 T 19-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ALIDE2_RS12665 8f7f256631cbd5eef28bd1e6282be53e 377 Pfam PF01571 Aminomethyltransferase folate-binding domain 13 259 5.1E-83 T 19-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal ALIDE2_RS12665 8f7f256631cbd5eef28bd1e6282be53e 377 PIRSF PIRSF006487 1 376 1.2E-74 T 19-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ALIDE2_RS12665 8f7f256631cbd5eef28bd1e6282be53e 377 SUPERFAMILY SSF103025 8 285 3.77E-81 T 19-04-2016 ALIDE2_RS12665 8f7f256631cbd5eef28bd1e6282be53e 377 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 272 365 2.7E-19 T 19-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ALIDE2_RS14880 10515265188b4bdb823345dd3a86faa9 434 PANTHER PTHR10742:SF299 1 430 9.9E-142 T 19-04-2016 ALIDE2_RS14880 10515265188b4bdb823345dd3a86faa9 434 Gene3D G3DSA:3.50.50.60 388 430 2.0E-29 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS14880 10515265188b4bdb823345dd3a86faa9 434 Gene3D G3DSA:3.50.50.60 311 322 2.0E-29 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS14880 10515265188b4bdb823345dd3a86faa9 434 Gene3D G3DSA:3.50.50.60 1 38 2.0E-29 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS14880 10515265188b4bdb823345dd3a86faa9 434 Gene3D G3DSA:3.50.50.60 224 279 2.0E-29 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS14880 10515265188b4bdb823345dd3a86faa9 434 PANTHER PTHR10742 1 430 9.9E-142 T 19-04-2016 ALIDE2_RS14880 10515265188b4bdb823345dd3a86faa9 434 SUPERFAMILY SSF51905 1 310 1.1E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS14880 10515265188b4bdb823345dd3a86faa9 434 SUPERFAMILY SSF51905 393 424 1.1E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS14880 10515265188b4bdb823345dd3a86faa9 434 Pfam PF01593 Flavin containing amine oxidoreductase 10 422 2.7E-12 T 19-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 ALIDE2_RS14835 18dc4a84cd615c688fac5057247de752 308 Pfam PF03466 LysR substrate binding domain 89 294 4.8E-12 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS14835 18dc4a84cd615c688fac5057247de752 308 PANTHER PTHR30293:SF2 1 304 6.3E-67 T 19-04-2016 ALIDE2_RS14835 18dc4a84cd615c688fac5057247de752 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.3E-17 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS14835 18dc4a84cd615c688fac5057247de752 308 SUPERFAMILY SSF53850 90 297 1.81E-21 T 19-04-2016 ALIDE2_RS14835 18dc4a84cd615c688fac5057247de752 308 SUPERFAMILY SSF46785 1 84 6.7E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14835 18dc4a84cd615c688fac5057247de752 308 Gene3D G3DSA:1.10.10.10 1 84 2.2E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14835 18dc4a84cd615c688fac5057247de752 308 Gene3D G3DSA:3.40.190.10 93 236 1.0E-6 T 19-04-2016 ALIDE2_RS14835 18dc4a84cd615c688fac5057247de752 308 PANTHER PTHR30293 1 304 6.3E-67 T 19-04-2016 ALIDE2_RS20325 8f7ac7cadd27b317c2ca86407f2cb6db 318 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 44 313 8.0E-83 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS20325 8f7ac7cadd27b317c2ca86407f2cb6db 318 PANTHER PTHR30349 8 277 2.3E-82 T 19-04-2016 ALIDE2_RS20325 8f7ac7cadd27b317c2ca86407f2cb6db 318 SUPERFAMILY SSF53850 105 269 1.24E-11 T 19-04-2016 ALIDE2_RS20325 8f7ac7cadd27b317c2ca86407f2cb6db 318 PANTHER PTHR30349:SF32 8 277 2.3E-82 T 19-04-2016 ALIDE2_RS20325 8f7ac7cadd27b317c2ca86407f2cb6db 318 PIRSF PIRSF017082 2 318 9.0E-87 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS05125 5b2b9706d836cd3573c644933cfe0b39 264 Gene3D G3DSA:3.20.20.10 9 249 1.0E-89 T 19-04-2016 IPR029066 PLP-binding barrel ALIDE2_RS05125 5b2b9706d836cd3573c644933cfe0b39 264 PANTHER PTHR10146 4 264 1.0E-87 T 19-04-2016 IPR011078 Uncharacterised protein family UPF0001 ALIDE2_RS05125 5b2b9706d836cd3573c644933cfe0b39 264 Pfam PF01168 Alanine racemase, N-terminal domain 25 247 1.9E-23 T 19-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS05125 5b2b9706d836cd3573c644933cfe0b39 264 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 20 247 3.9E-54 T 19-04-2016 IPR011078 Uncharacterised protein family UPF0001 ALIDE2_RS05125 5b2b9706d836cd3573c644933cfe0b39 264 PIRSF PIRSF004848 13 252 5.2E-67 T 19-04-2016 IPR011078 Uncharacterised protein family UPF0001 ALIDE2_RS05125 5b2b9706d836cd3573c644933cfe0b39 264 SUPERFAMILY SSF51419 15 245 5.37E-74 T 19-04-2016 IPR029066 PLP-binding barrel ALIDE2_RS17510 449c8a99bf24eefaeb6142c9817fe75a 357 Pfam PF13609 Gram-negative porin 8 329 1.4E-54 T 19-04-2016 ALIDE2_RS17510 449c8a99bf24eefaeb6142c9817fe75a 357 SUPERFAMILY SSF56935 20 357 1.2E-52 T 19-04-2016 ALIDE2_RS17510 449c8a99bf24eefaeb6142c9817fe75a 357 Gene3D G3DSA:2.40.160.10 20 357 2.6E-67 T 19-04-2016 IPR023614 Porin domain ALIDE2_RS03705 e390a824b5ff5587b9977a601986516c 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 71 83 1.3E-27 T 19-04-2016 IPR003004 GspF/PilC family ALIDE2_RS03705 e390a824b5ff5587b9977a601986516c 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 170 198 1.3E-27 T 19-04-2016 IPR003004 GspF/PilC family ALIDE2_RS03705 e390a824b5ff5587b9977a601986516c 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 408 1.3E-27 T 19-04-2016 IPR003004 GspF/PilC family ALIDE2_RS03705 e390a824b5ff5587b9977a601986516c 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 373 387 1.3E-27 T 19-04-2016 IPR003004 GspF/PilC family ALIDE2_RS03705 e390a824b5ff5587b9977a601986516c 409 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 408 1.4E-133 T 19-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 ALIDE2_RS03705 e390a824b5ff5587b9977a601986516c 409 Pfam PF00482 Type II secretion system (T2SS), protein F 75 198 2.1E-31 T 19-04-2016 IPR018076 Type II secretion system F domain ALIDE2_RS03705 e390a824b5ff5587b9977a601986516c 409 Pfam PF00482 Type II secretion system (T2SS), protein F 278 398 4.2E-24 T 19-04-2016 IPR018076 Type II secretion system F domain ALIDE2_RS03705 e390a824b5ff5587b9977a601986516c 409 PANTHER PTHR30012:SF5 2 409 7.6E-130 T 19-04-2016 ALIDE2_RS03705 e390a824b5ff5587b9977a601986516c 409 PANTHER PTHR30012 2 409 7.6E-130 T 19-04-2016 ALIDE2_RS02645 622492ebbd4f2ea8e1e4282f03bc7efd 494 Gene3D G3DSA:3.30.1730.10 12 176 8.1E-57 T 19-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 ALIDE2_RS02645 622492ebbd4f2ea8e1e4282f03bc7efd 494 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 18 494 1.7E-195 T 19-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 ALIDE2_RS02645 622492ebbd4f2ea8e1e4282f03bc7efd 494 PANTHER PTHR21234:SF11 186 231 1.2E-116 T 19-04-2016 ALIDE2_RS02645 622492ebbd4f2ea8e1e4282f03bc7efd 494 PANTHER PTHR21234:SF11 257 494 1.2E-116 T 19-04-2016 ALIDE2_RS02645 622492ebbd4f2ea8e1e4282f03bc7efd 494 PANTHER PTHR21234 186 231 1.2E-116 T 19-04-2016 IPR018017 Nucleoside phosphorylase ALIDE2_RS02645 622492ebbd4f2ea8e1e4282f03bc7efd 494 PANTHER PTHR21234 257 494 1.2E-116 T 19-04-2016 IPR018017 Nucleoside phosphorylase ALIDE2_RS02645 622492ebbd4f2ea8e1e4282f03bc7efd 494 Hamap MF_01932 AMP nucleosidase [amn]. 10 494 62.331 T 19-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 ALIDE2_RS02645 622492ebbd4f2ea8e1e4282f03bc7efd 494 SUPERFAMILY SSF53167 17 494 4.95E-147 T 19-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ALIDE2_RS02645 622492ebbd4f2ea8e1e4282f03bc7efd 494 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 20 173 3.2E-53 T 19-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 ALIDE2_RS02645 622492ebbd4f2ea8e1e4282f03bc7efd 494 Pfam PF01048 Phosphorylase superfamily 280 439 1.1E-12 T 19-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ALIDE2_RS02645 622492ebbd4f2ea8e1e4282f03bc7efd 494 Gene3D G3DSA:3.40.50.1580 180 473 2.4E-116 T 19-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ALIDE2_RS05995 b3b43763282a3be4e5d04240c5f4f410 328 Gene3D G3DSA:3.90.1150.10 233 327 2.7E-7 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS05995 b3b43763282a3be4e5d04240c5f4f410 328 Pfam PF00155 Aminotransferase class I and II 185 312 3.2E-4 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ALIDE2_RS05995 b3b43763282a3be4e5d04240c5f4f410 328 Gene3D G3DSA:3.40.640.10 32 219 2.6E-17 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS05995 b3b43763282a3be4e5d04240c5f4f410 328 SUPERFAMILY SSF53383 17 319 1.35E-35 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS21485 fc843a5e7f7ede3dae11918be672746c 597 SUPERFAMILY SSF56645 32 290 1.57E-47 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS21485 fc843a5e7f7ede3dae11918be672746c 597 PANTHER PTHR10909 5 371 3.2E-173 T 19-04-2016 ALIDE2_RS21485 fc843a5e7f7ede3dae11918be672746c 597 PANTHER PTHR10909 388 474 3.2E-173 T 19-04-2016 ALIDE2_RS21485 fc843a5e7f7ede3dae11918be672746c 597 Gene3D G3DSA:1.10.540.10 28 153 1.1E-12 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS21485 fc843a5e7f7ede3dae11918be672746c 597 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 472 591 2.4E-27 T 19-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain ALIDE2_RS21485 fc843a5e7f7ede3dae11918be672746c 597 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 449 2.1E-18 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS21485 fc843a5e7f7ede3dae11918be672746c 597 Gene3D G3DSA:1.20.140.10 271 454 9.8E-40 T 19-04-2016 ALIDE2_RS21485 fc843a5e7f7ede3dae11918be672746c 597 SUPERFAMILY SSF47203 279 456 7.25E-35 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS21485 fc843a5e7f7ede3dae11918be672746c 597 PANTHER PTHR10909:SF269 5 371 3.2E-173 T 19-04-2016 ALIDE2_RS21485 fc843a5e7f7ede3dae11918be672746c 597 PANTHER PTHR10909:SF269 388 474 3.2E-173 T 19-04-2016 ALIDE2_RS21485 fc843a5e7f7ede3dae11918be672746c 597 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 153 7.6E-10 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS21485 fc843a5e7f7ede3dae11918be672746c 597 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 159 266 3.8E-14 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS21485 fc843a5e7f7ede3dae11918be672746c 597 Gene3D G3DSA:2.40.110.10 157 270 9.2E-23 T 19-04-2016 ALIDE2_RS02900 e2e88cfafee9d3b7c065ca4f31a44da1 561 Gene3D G3DSA:2.30.38.10 388 459 7.8E-30 T 19-04-2016 ALIDE2_RS02900 e2e88cfafee9d3b7c065ca4f31a44da1 561 Pfam PF00501 AMP-binding enzyme 30 468 1.3E-98 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS02900 e2e88cfafee9d3b7c065ca4f31a44da1 561 PANTHER PTHR24096 1 159 4.1E-158 T 19-04-2016 ALIDE2_RS02900 e2e88cfafee9d3b7c065ca4f31a44da1 561 PANTHER PTHR24096 182 558 4.1E-158 T 19-04-2016 ALIDE2_RS02900 e2e88cfafee9d3b7c065ca4f31a44da1 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 215 226 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS02900 e2e88cfafee9d3b7c065ca4f31a44da1 561 Pfam PF13193 AMP-binding enzyme C-terminal domain 477 551 2.1E-19 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS02900 e2e88cfafee9d3b7c065ca4f31a44da1 561 Gene3D G3DSA:3.40.50.980 189 220 7.1E-38 T 19-04-2016 ALIDE2_RS02900 e2e88cfafee9d3b7c065ca4f31a44da1 561 Gene3D G3DSA:3.40.50.980 25 151 7.1E-38 T 19-04-2016 ALIDE2_RS02900 e2e88cfafee9d3b7c065ca4f31a44da1 561 Gene3D G3DSA:3.40.50.980 221 387 2.5E-35 T 19-04-2016 ALIDE2_RS02900 e2e88cfafee9d3b7c065ca4f31a44da1 561 SUPERFAMILY SSF56801 22 559 9.94E-143 T 19-04-2016 ALIDE2_RS02900 e2e88cfafee9d3b7c065ca4f31a44da1 561 Gene3D G3DSA:3.30.300.30 465 559 1.5E-28 T 19-04-2016 ALIDE2_RS16700 4d635d33730f34f66c984561451b2ed8 204 Pfam PF04011 LemA family 7 194 2.9E-63 T 19-04-2016 IPR007156 LemA ALIDE2_RS16700 4d635d33730f34f66c984561451b2ed8 204 Gene3D G3DSA:1.20.1440.20 14 194 2.3E-60 T 19-04-2016 IPR023353 LemA-like domain ALIDE2_RS16700 4d635d33730f34f66c984561451b2ed8 204 PANTHER PTHR34478 1 197 5.7E-83 T 19-04-2016 ALIDE2_RS16700 4d635d33730f34f66c984561451b2ed8 204 PANTHER PTHR34478:SF2 1 197 5.7E-83 T 19-04-2016 ALIDE2_RS16700 4d635d33730f34f66c984561451b2ed8 204 SUPERFAMILY SSF140478 24 180 1.11E-51 T 19-04-2016 IPR023353 LemA-like domain ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 Gene3D G3DSA:3.20.20.70 5 489 6.0E-197 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 PANTHER PTHR11911:SF6 299 489 2.7E-240 T 19-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 PANTHER PTHR11911:SF6 5 281 2.7E-240 T 19-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 477 8.1E-163 T 19-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 SUPERFAMILY SSF54631 94 203 1.11E-24 T 19-04-2016 ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 SMART SM01240 6 477 0.0 T 19-04-2016 ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 PANTHER PTHR11911 299 489 2.7E-240 T 19-04-2016 ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 PANTHER PTHR11911 5 281 2.7E-240 T 19-04-2016 ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 490 83.984 T 19-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 SUPERFAMILY SSF51412 217 481 6.15E-125 T 19-04-2016 ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 SUPERFAMILY SSF51412 4 89 6.15E-125 T 19-04-2016 ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 SMART SM00116 95 142 6.5E-8 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 SMART SM00116 156 206 2.8E-4 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 19-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 Pfam PF00571 CBS domain 147 201 5.5E-5 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 Pfam PF00571 CBS domain 94 138 1.4E-7 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 457 1.7E-188 T 19-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 ALIDE2_RS10730 6ad84a0ad157d6f72a61f45b6faf6b24 491 PIRSF PIRSF000130 1 491 1.4E-200 T 19-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 ALIDE2_RS04010 114de160e8ca7936f60342b3caa5c071 501 PANTHER PTHR11699:SF181 9 486 8.4E-279 T 19-04-2016 ALIDE2_RS04010 114de160e8ca7936f60342b3caa5c071 501 PANTHER PTHR11699 9 486 8.4E-279 T 19-04-2016 ALIDE2_RS04010 114de160e8ca7936f60342b3caa5c071 501 Gene3D G3DSA:3.40.605.10 6 263 3.9E-95 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS04010 114de160e8ca7936f60342b3caa5c071 501 SUPERFAMILY SSF53720 3 485 1.13E-145 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS04010 114de160e8ca7936f60342b3caa5c071 501 Gene3D G3DSA:3.40.309.10 264 444 6.3E-65 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS04010 114de160e8ca7936f60342b3caa5c071 501 Pfam PF00171 Aldehyde dehydrogenase family 22 479 8.7E-136 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS04010 114de160e8ca7936f60342b3caa5c071 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS04010 114de160e8ca7936f60342b3caa5c071 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 8 483 2.4E-216 T 19-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 ALIDE2_RS03255 70cdd20e3e2f6ec1294a25855da500d2 273 Gene3D G3DSA:3.40.50.1000 180 262 1.4E-19 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS03255 70cdd20e3e2f6ec1294a25855da500d2 273 Gene3D G3DSA:3.40.50.1000 15 91 1.4E-19 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS03255 70cdd20e3e2f6ec1294a25855da500d2 273 SUPERFAMILY SSF56784 12 266 1.5E-27 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS03255 70cdd20e3e2f6ec1294a25855da500d2 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 15 234 3.4E-18 T 19-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 ALIDE2_RS03255 70cdd20e3e2f6ec1294a25855da500d2 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 16 81 1.8E-7 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS02680 6b2614b4385dcd3d7cebc12ee654e623 416 PANTHER PTHR24023:SF593 309 398 2.3E-21 T 19-04-2016 ALIDE2_RS02680 6b2614b4385dcd3d7cebc12ee654e623 416 PANTHER PTHR24023:SF593 74 286 2.3E-21 T 19-04-2016 ALIDE2_RS02680 6b2614b4385dcd3d7cebc12ee654e623 416 Gene3D G3DSA:3.30.1540.10 235 323 1.1E-15 T 19-04-2016 ALIDE2_RS02680 6b2614b4385dcd3d7cebc12ee654e623 416 SUPERFAMILY SSF89796 3 411 3.53E-112 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS02680 6b2614b4385dcd3d7cebc12ee654e623 416 Gene3D G3DSA:3.40.50.10540 1 223 3.4E-98 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS02680 6b2614b4385dcd3d7cebc12ee654e623 416 Gene3D G3DSA:3.40.50.10540 324 411 3.4E-98 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS02680 6b2614b4385dcd3d7cebc12ee654e623 416 PANTHER PTHR24023 309 398 2.3E-21 T 19-04-2016 ALIDE2_RS02680 6b2614b4385dcd3d7cebc12ee654e623 416 PANTHER PTHR24023 74 286 2.3E-21 T 19-04-2016 ALIDE2_RS02680 6b2614b4385dcd3d7cebc12ee654e623 416 Pfam PF02515 CoA-transferase family III 5 387 6.2E-107 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS12975 77fbad13bef022dc6facbfd81c282419 148 SUPERFAMILY SSF89095 1 146 1.36E-44 T 19-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 ALIDE2_RS12975 77fbad13bef022dc6facbfd81c282419 148 PANTHER PTHR28055:SF1 1 148 2.3E-56 T 19-04-2016 ALIDE2_RS12975 77fbad13bef022dc6facbfd81c282419 148 Gene3D G3DSA:1.10.10.410 91 147 3.2E-23 T 19-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal ALIDE2_RS12975 77fbad13bef022dc6facbfd81c282419 148 PANTHER PTHR28055 1 148 2.3E-56 T 19-04-2016 ALIDE2_RS12975 77fbad13bef022dc6facbfd81c282419 148 Gene3D G3DSA:1.10.1510.10 1 90 1.0E-34 T 19-04-2016 ALIDE2_RS12975 77fbad13bef022dc6facbfd81c282419 148 Pfam PF09424 Yqey-like protein 4 146 2.0E-55 T 19-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial ALIDE2_RS05075 2d5ef6bb0d5e3adcab17e3e3fa8ad461 289 SMART SM00342 204 286 1.4E-24 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS05075 2d5ef6bb0d5e3adcab17e3e3fa8ad461 289 PANTHER PTHR11019:SF77 11 288 1.0E-35 T 19-04-2016 ALIDE2_RS05075 2d5ef6bb0d5e3adcab17e3e3fa8ad461 289 Pfam PF12833 Helix-turn-helix domain 210 287 5.8E-18 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS05075 2d5ef6bb0d5e3adcab17e3e3fa8ad461 289 Pfam PF12852 Cupin 12 169 1.4E-28 T 19-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain ALIDE2_RS05075 2d5ef6bb0d5e3adcab17e3e3fa8ad461 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 241 282 - T 19-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS05075 2d5ef6bb0d5e3adcab17e3e3fa8ad461 289 Gene3D G3DSA:1.10.10.60 184 241 5.7E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS05075 2d5ef6bb0d5e3adcab17e3e3fa8ad461 289 SUPERFAMILY SSF46689 240 287 1.03E-7 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS05075 2d5ef6bb0d5e3adcab17e3e3fa8ad461 289 PANTHER PTHR11019 11 288 1.0E-35 T 19-04-2016 ALIDE2_RS05075 2d5ef6bb0d5e3adcab17e3e3fa8ad461 289 Gene3D G3DSA:1.10.10.60 242 285 4.2E-10 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS05075 2d5ef6bb0d5e3adcab17e3e3fa8ad461 289 SUPERFAMILY SSF46689 188 237 5.65E-9 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS12270 1e7955364a259b5409bcabc5c7366ebb 334 SUPERFAMILY SSF53850 87 315 2.48E-23 T 19-04-2016 ALIDE2_RS12270 1e7955364a259b5409bcabc5c7366ebb 334 Gene3D G3DSA:3.40.190.10 203 257 4.3E-9 T 19-04-2016 ALIDE2_RS12270 1e7955364a259b5409bcabc5c7366ebb 334 Pfam PF03466 LysR substrate binding domain 87 311 4.8E-20 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS12270 1e7955364a259b5409bcabc5c7366ebb 334 Gene3D G3DSA:3.40.190.10 81 202 3.4E-14 T 19-04-2016 ALIDE2_RS12270 1e7955364a259b5409bcabc5c7366ebb 334 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.0E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12270 1e7955364a259b5409bcabc5c7366ebb 334 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.0E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12270 1e7955364a259b5409bcabc5c7366ebb 334 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.0E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS12270 1e7955364a259b5409bcabc5c7366ebb 334 SUPERFAMILY SSF46785 1 87 1.4E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12270 1e7955364a259b5409bcabc5c7366ebb 334 PANTHER PTHR30293 1 328 2.1E-52 T 19-04-2016 ALIDE2_RS12270 1e7955364a259b5409bcabc5c7366ebb 334 Gene3D G3DSA:1.10.10.10 1 80 2.8E-30 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12270 1e7955364a259b5409bcabc5c7366ebb 334 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.1E-21 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS04290 acd81b0214761206afabb043fa22e0d5 203 SUPERFAMILY SSF52833 1 101 1.48E-26 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS04290 acd81b0214761206afabb043fa22e0d5 203 SUPERFAMILY SSF47616 73 202 1.85E-23 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS04290 acd81b0214761206afabb043fa22e0d5 203 PANTHER PTHR11260 1 202 2.8E-62 T 19-04-2016 ALIDE2_RS04290 acd81b0214761206afabb043fa22e0d5 203 Gene3D G3DSA:1.20.1050.10 91 194 1.0E-17 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS04290 acd81b0214761206afabb043fa22e0d5 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 4.7E-16 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ALIDE2_RS04290 acd81b0214761206afabb043fa22e0d5 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 114 188 6.1E-7 T 19-04-2016 IPR004046 Glutathione S-transferase, C-terminal ALIDE2_RS04290 acd81b0214761206afabb043fa22e0d5 203 Gene3D G3DSA:3.40.30.10 1 90 2.4E-33 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS04290 acd81b0214761206afabb043fa22e0d5 203 PANTHER PTHR11260:SF44 1 202 2.8E-62 T 19-04-2016 ALIDE2_RS18895 5d73cdfcdc14b6b73f12666bf675b60e 270 SUPERFAMILY SSF53098 101 262 2.28E-39 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS18895 5d73cdfcdc14b6b73f12666bf675b60e 270 PANTHER PTHR32552 1 261 3.7E-80 T 19-04-2016 ALIDE2_RS18895 5d73cdfcdc14b6b73f12666bf675b60e 270 Pfam PF13683 Integrase core domain 192 257 3.6E-27 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS18895 5d73cdfcdc14b6b73f12666bf675b60e 270 Gene3D G3DSA:3.30.420.10 101 257 1.5E-42 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS18895 5d73cdfcdc14b6b73f12666bf675b60e 270 PANTHER PTHR32552:SF26 1 261 3.7E-80 T 19-04-2016 ALIDE2_RS09950 96aa88c2bf4cecdbc64963f19a6b061a 459 PANTHER PTHR30461:SF3 1 335 5.2E-56 T 19-04-2016 ALIDE2_RS09950 96aa88c2bf4cecdbc64963f19a6b061a 459 SUPERFAMILY SSF53041 11 166 8.24E-40 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS09950 96aa88c2bf4cecdbc64963f19a6b061a 459 Pfam PF00239 Resolvase, N terminal domain 14 165 2.2E-42 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS09950 96aa88c2bf4cecdbc64963f19a6b061a 459 Gene3D G3DSA:3.40.50.1390 12 147 1.2E-36 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS09950 96aa88c2bf4cecdbc64963f19a6b061a 459 PANTHER PTHR30461 1 335 5.2E-56 T 19-04-2016 ALIDE2_RS09950 96aa88c2bf4cecdbc64963f19a6b061a 459 SMART SM00857 13 166 2.3E-63 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS09950 96aa88c2bf4cecdbc64963f19a6b061a 459 Pfam PF07508 Recombinase 187 281 5.2E-13 T 19-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 ALIDE2_RS22935 0a22361c3340356b33cabfa29c26ae69 392 PANTHER PTHR23504 5 357 3.8E-95 T 19-04-2016 ALIDE2_RS22935 0a22361c3340356b33cabfa29c26ae69 392 PANTHER PTHR23504:SF37 5 357 3.8E-95 T 19-04-2016 ALIDE2_RS22935 0a22361c3340356b33cabfa29c26ae69 392 SUPERFAMILY SSF103473 6 389 5.62E-52 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS22935 0a22361c3340356b33cabfa29c26ae69 392 Gene3D G3DSA:1.20.1250.20 10 188 3.5E-27 T 19-04-2016 ALIDE2_RS22935 0a22361c3340356b33cabfa29c26ae69 392 Gene3D G3DSA:1.20.1250.20 204 387 3.0E-14 T 19-04-2016 ALIDE2_RS22935 0a22361c3340356b33cabfa29c26ae69 392 Pfam PF07690 Major Facilitator Superfamily 15 350 8.0E-36 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS22935 0a22361c3340356b33cabfa29c26ae69 392 ProSitePatterns PS00216 Sugar transport proteins signature 1. 64 80 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ALIDE2_RS02700 a6ba8fd6771c538761469d7129748cf7 316 SUPERFAMILY SSF52540 102 278 1.36E-39 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02700 a6ba8fd6771c538761469d7129748cf7 316 Gene3D G3DSA:3.40.50.300 102 305 3.6E-85 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02700 a6ba8fd6771c538761469d7129748cf7 316 PANTHER PTHR30473 1 312 6.7E-156 T 19-04-2016 ALIDE2_RS02700 a6ba8fd6771c538761469d7129748cf7 316 PANTHER PTHR30473:SF1 1 312 6.7E-156 T 19-04-2016 ALIDE2_RS02700 a6ba8fd6771c538761469d7129748cf7 316 Pfam PF02562 PhoH-like protein 103 306 4.8E-92 T 19-04-2016 IPR003714 PhoH-like protein GO:0005524 ALIDE2_RS03535 b20331ec60b6ef7a3fa7653991256bd7 425 Gene3D G3DSA:3.40.50.720 232 416 2.5E-39 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03535 b20331ec60b6ef7a3fa7653991256bd7 425 PANTHER PTHR11374:SF25 6 417 4.8E-234 T 19-04-2016 ALIDE2_RS03535 b20331ec60b6ef7a3fa7653991256bd7 425 PANTHER PTHR11374 6 417 4.8E-234 T 19-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 ALIDE2_RS03535 b20331ec60b6ef7a3fa7653991256bd7 425 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 416 3.1E-18 T 19-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS03535 b20331ec60b6ef7a3fa7653991256bd7 425 SUPERFAMILY SSF51735 7 191 1.26E-42 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03535 b20331ec60b6ef7a3fa7653991256bd7 425 PIRSF PIRSF500136 1 425 2.3E-146 T 19-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 ALIDE2_RS03535 b20331ec60b6ef7a3fa7653991256bd7 425 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 202 290 9.3E-24 T 19-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS03535 b20331ec60b6ef7a3fa7653991256bd7 425 Gene3D G3DSA:3.40.50.720 4 222 1.7E-53 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03535 b20331ec60b6ef7a3fa7653991256bd7 425 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 7 180 4.3E-30 T 19-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS03535 b20331ec60b6ef7a3fa7653991256bd7 425 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 7 412 5.4E-114 T 19-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 ALIDE2_RS03535 b20331ec60b6ef7a3fa7653991256bd7 425 SUPERFAMILY SSF48179 201 292 5.61E-25 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS03535 b20331ec60b6ef7a3fa7653991256bd7 425 PIRSF PIRSF000124 6 421 1.9E-51 T 19-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 ALIDE2_RS03535 b20331ec60b6ef7a3fa7653991256bd7 425 SMART SM00984 317 418 3.0E-30 T 19-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS03535 b20331ec60b6ef7a3fa7653991256bd7 425 SUPERFAMILY SSF52413 302 417 7.85E-25 T 19-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS05800 1f01294b6b19a7ec47c07ab9e1a9bbfd 258 SUPERFAMILY SSF52096 7 257 1.61E-83 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS05800 1f01294b6b19a7ec47c07ab9e1a9bbfd 258 PANTHER PTHR11941 9 255 2.0E-82 T 19-04-2016 ALIDE2_RS05800 1f01294b6b19a7ec47c07ab9e1a9bbfd 258 Gene3D G3DSA:3.90.226.10 3 198 9.3E-65 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS05800 1f01294b6b19a7ec47c07ab9e1a9bbfd 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS05800 1f01294b6b19a7ec47c07ab9e1a9bbfd 258 Gene3D G3DSA:1.10.12.10 199 257 1.8E-20 T 19-04-2016 IPR014748 Crontonase, C-terminal ALIDE2_RS05800 1f01294b6b19a7ec47c07ab9e1a9bbfd 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 257 1.2E-69 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS10885 ee7a6f8348d3d011f27e8fd83955dca1 227 SUPERFAMILY SSF52172 2 127 1.02E-39 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS10885 ee7a6f8348d3d011f27e8fd83955dca1 227 Pfam PF00072 Response regulator receiver domain 3 113 5.2E-28 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS10885 ee7a6f8348d3d011f27e8fd83955dca1 227 Gene3D G3DSA:3.40.50.2300 2 120 4.7E-39 T 19-04-2016 ALIDE2_RS10885 ee7a6f8348d3d011f27e8fd83955dca1 227 SMART SM00862 146 221 3.4E-24 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS10885 ee7a6f8348d3d011f27e8fd83955dca1 227 Gene3D G3DSA:1.10.10.10 124 224 8.9E-32 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS10885 ee7a6f8348d3d011f27e8fd83955dca1 227 SMART SM00448 1 112 8.4E-42 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS10885 ee7a6f8348d3d011f27e8fd83955dca1 227 SUPERFAMILY SSF46894 124 222 2.07E-28 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS10885 ee7a6f8348d3d011f27e8fd83955dca1 227 PANTHER PTHR26402 1 222 1.0E-104 T 19-04-2016 ALIDE2_RS10885 ee7a6f8348d3d011f27e8fd83955dca1 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 2.2E-24 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS10885 ee7a6f8348d3d011f27e8fd83955dca1 227 PANTHER PTHR26402:SF575 1 222 1.0E-104 T 19-04-2016 ALIDE2_RS10885 ee7a6f8348d3d011f27e8fd83955dca1 227 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 4.4E-106 T 19-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 ALIDE2_RS07990 258de7016f7eef5f43595400397731e8 101 SUPERFAMILY SSF47413 7 66 3.38E-10 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS07990 258de7016f7eef5f43595400397731e8 101 Pfam PF01381 Helix-turn-helix 11 60 5.3E-6 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS07990 258de7016f7eef5f43595400397731e8 101 SMART SM00530 10 63 1.9E-5 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS07990 258de7016f7eef5f43595400397731e8 101 Gene3D G3DSA:1.10.260.40 5 67 3.4E-12 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS11685 d89b5922fa36c4b04b59e6d58d6b36fe 531 SUPERFAMILY SSF46626 11 113 2.12E-18 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS11685 d89b5922fa36c4b04b59e6d58d6b36fe 531 SUPERFAMILY SSF51004 113 524 1.31E-73 T 19-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain ALIDE2_RS11685 d89b5922fa36c4b04b59e6d58d6b36fe 531 Gene3D G3DSA:2.140.10.20 240 518 4.2E-51 T 19-04-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain ALIDE2_RS11685 d89b5922fa36c4b04b59e6d58d6b36fe 531 Pfam PF02239 Cytochrome D1 heme domain 324 522 7.7E-46 T 19-04-2016 ALIDE2_RS11685 d89b5922fa36c4b04b59e6d58d6b36fe 531 Pfam PF02239 Cytochrome D1 heme domain 140 295 1.6E-53 T 19-04-2016 ALIDE2_RS11685 d89b5922fa36c4b04b59e6d58d6b36fe 531 Gene3D G3DSA:2.130.10.10 143 239 2.4E-9 T 19-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ALIDE2_RS11685 d89b5922fa36c4b04b59e6d58d6b36fe 531 Gene3D G3DSA:1.10.760.10 22 105 4.2E-19 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS11685 d89b5922fa36c4b04b59e6d58d6b36fe 531 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 33 103 4.0E-12 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS22255 6ada4b2e28fb58d4aac4ae0ff1a18729 490 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 384 398 2.0E-15 T 19-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ALIDE2_RS22255 6ada4b2e28fb58d4aac4ae0ff1a18729 490 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 444 457 2.0E-15 T 19-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ALIDE2_RS22255 6ada4b2e28fb58d4aac4ae0ff1a18729 490 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 312 334 2.0E-15 T 19-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ALIDE2_RS22255 6ada4b2e28fb58d4aac4ae0ff1a18729 490 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 84 103 2.0E-15 T 19-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ALIDE2_RS22255 6ada4b2e28fb58d4aac4ae0ff1a18729 490 PANTHER PTHR30023:SF0 3 488 3.4E-65 T 19-04-2016 ALIDE2_RS22255 6ada4b2e28fb58d4aac4ae0ff1a18729 490 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 46 486 9.7E-73 T 19-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ALIDE2_RS22255 6ada4b2e28fb58d4aac4ae0ff1a18729 490 SUPERFAMILY SSF56601 41 486 4.64E-91 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS22255 6ada4b2e28fb58d4aac4ae0ff1a18729 490 PANTHER PTHR30023 3 488 3.4E-65 T 19-04-2016 ALIDE2_RS22255 6ada4b2e28fb58d4aac4ae0ff1a18729 490 Gene3D G3DSA:3.40.710.10 255 486 2.4E-67 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS22255 6ada4b2e28fb58d4aac4ae0ff1a18729 490 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 77 466 2.3E-50 T 19-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ALIDE2_RS05875 b539f967ebd19d730c35d98b5c0e567b 142 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 135 10.857 T 19-04-2016 IPR022907 VapC family GO:0004540 ALIDE2_RS05875 b539f967ebd19d730c35d98b5c0e567b 142 PANTHER PTHR33653 1 136 1.1E-28 T 19-04-2016 ALIDE2_RS05875 b539f967ebd19d730c35d98b5c0e567b 142 SUPERFAMILY SSF88723 1 136 3.21E-26 T 19-04-2016 IPR029060 PIN domain-like ALIDE2_RS05875 b539f967ebd19d730c35d98b5c0e567b 142 Pfam PF01850 PIN domain 4 126 5.5E-11 T 19-04-2016 IPR002716 PIN domain ALIDE2_RS05875 b539f967ebd19d730c35d98b5c0e567b 142 PANTHER PTHR33653:SF1 1 136 1.1E-28 T 19-04-2016 ALIDE2_RS05875 b539f967ebd19d730c35d98b5c0e567b 142 Gene3D G3DSA:3.40.50.1010 1 127 1.1E-18 T 19-04-2016 IPR029060 PIN domain-like ALIDE2_RS13350 33cb29750f78f87836119f1814544808 247 SUPERFAMILY SSF53448 11 245 1.78E-30 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS13350 33cb29750f78f87836119f1814544808 247 Gene3D G3DSA:3.90.550.10 92 194 5.4E-4 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS05690 11ce85abe6a92b32fff80d47a21af1d1 189 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 20 188 1.8E-57 T 19-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 ALIDE2_RS05690 11ce85abe6a92b32fff80d47a21af1d1 189 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 18 188 9.6E-58 T 19-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 ALIDE2_RS05690 11ce85abe6a92b32fff80d47a21af1d1 189 PANTHER PTHR30069 18 188 1.1E-55 T 19-04-2016 ALIDE2_RS05690 11ce85abe6a92b32fff80d47a21af1d1 189 SUPERFAMILY SSF52540 18 188 8.4E-60 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05690 11ce85abe6a92b32fff80d47a21af1d1 189 Gene3D G3DSA:3.40.50.300 14 188 2.4E-65 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05690 11ce85abe6a92b32fff80d47a21af1d1 189 PIRSF PIRSF015617 1 189 5.2E-62 T 19-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 ALIDE2_RS01545 664d1f787369b9e11937994ae78ba9b9 400 PANTHER PTHR10909:SF195 1 400 4.5E-103 T 19-04-2016 ALIDE2_RS01545 664d1f787369b9e11937994ae78ba9b9 400 Gene3D G3DSA:1.20.140.10 225 388 2.0E-51 T 19-04-2016 ALIDE2_RS01545 664d1f787369b9e11937994ae78ba9b9 400 SUPERFAMILY SSF47203 232 384 2.42E-48 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS01545 664d1f787369b9e11937994ae78ba9b9 400 SUPERFAMILY SSF56645 1 245 1.57E-61 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS01545 664d1f787369b9e11937994ae78ba9b9 400 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 1.4E-39 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS01545 664d1f787369b9e11937994ae78ba9b9 400 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 124 1.5E-18 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS01545 664d1f787369b9e11937994ae78ba9b9 400 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 208 6.7E-18 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS01545 664d1f787369b9e11937994ae78ba9b9 400 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS01545 664d1f787369b9e11937994ae78ba9b9 400 Gene3D G3DSA:1.10.540.10 1 126 5.6E-27 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS01545 664d1f787369b9e11937994ae78ba9b9 400 PANTHER PTHR10909 1 400 4.5E-103 T 19-04-2016 ALIDE2_RS01545 664d1f787369b9e11937994ae78ba9b9 400 Gene3D G3DSA:2.40.110.10 127 224 1.4E-30 T 19-04-2016 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 Gene3D G3DSA:3.30.160.40 223 306 5.7E-18 T 19-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 PIRSF PIRSF001438 1 309 3.1E-112 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 SUPERFAMILY SSF54782 223 305 2.22E-16 T 19-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 227 301 1.2E-10 T 19-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 Gene3D G3DSA:3.40.190.10 113 201 1.1E-41 T 19-04-2016 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 10 301 7.7E-104 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 SUPERFAMILY SSF53850 9 220 8.79E-81 T 19-04-2016 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 9 303 36.333 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 PANTHER PTHR11557 9 305 1.6E-133 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 Gene3D G3DSA:3.40.190.10 9 112 5.4E-46 T 19-04-2016 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 PRINTS PR00151 Porphobilinogen deaminase signature 232 249 1.9E-45 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 PRINTS PR00151 Porphobilinogen deaminase signature 126 143 1.9E-45 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 PRINTS PR00151 Porphobilinogen deaminase signature 78 97 1.9E-45 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 PRINTS PR00151 Porphobilinogen deaminase signature 145 162 1.9E-45 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 PRINTS PR00151 Porphobilinogen deaminase signature 47 67 1.9E-45 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 10 214 5.1E-80 T 19-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS08245 8277e1221e66fe10769799b536b39d84 309 PANTHER PTHR11557:SF0 9 305 1.6E-133 T 19-04-2016 ALIDE2_RS09570 da5b8bb5729f04c9db6afa8ec9d5f0c3 230 Pfam PF11444 Protein of unknown function (DUF2895) 6 206 5.1E-90 T 19-04-2016 IPR021548 Protein of unknown function DUF2895 ALIDE2_RS09570 da5b8bb5729f04c9db6afa8ec9d5f0c3 230 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 207 1.6E-95 T 19-04-2016 IPR021548 Protein of unknown function DUF2895 ALIDE2_RS11315 ba046cdba3613b889ecc1e6a98cce754 609 SUPERFAMILY SSF50998 456 579 5.49E-6 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ALIDE2_RS03725 6597394b8eb33b7583d93e7443696b92 777 Pfam PF03958 Bacterial type II/III secretion system short domain 213 295 7.6E-15 T 19-04-2016 IPR005644 NolW-like ALIDE2_RS03725 6597394b8eb33b7583d93e7443696b92 777 Pfam PF03958 Bacterial type II/III secretion system short domain 306 434 7.6E-13 T 19-04-2016 IPR005644 NolW-like ALIDE2_RS03725 6597394b8eb33b7583d93e7443696b92 777 Pfam PF03958 Bacterial type II/III secretion system short domain 150 209 6.9E-9 T 19-04-2016 IPR005644 NolW-like ALIDE2_RS03725 6597394b8eb33b7583d93e7443696b92 777 PANTHER PTHR30332:SF8 46 764 7.3E-176 T 19-04-2016 ALIDE2_RS03725 6597394b8eb33b7583d93e7443696b92 777 PRINTS PR00811 Bacterial general secretion pathway protein D signature 557 567 1.3E-29 T 19-04-2016 IPR001775 GspD/PilQ family ALIDE2_RS03725 6597394b8eb33b7583d93e7443696b92 777 PRINTS PR00811 Bacterial general secretion pathway protein D signature 681 695 1.3E-29 T 19-04-2016 IPR001775 GspD/PilQ family ALIDE2_RS03725 6597394b8eb33b7583d93e7443696b92 777 PRINTS PR00811 Bacterial general secretion pathway protein D signature 522 546 1.3E-29 T 19-04-2016 IPR001775 GspD/PilQ family ALIDE2_RS03725 6597394b8eb33b7583d93e7443696b92 777 PRINTS PR00811 Bacterial general secretion pathway protein D signature 434 444 1.3E-29 T 19-04-2016 IPR001775 GspD/PilQ family ALIDE2_RS03725 6597394b8eb33b7583d93e7443696b92 777 PRINTS PR00811 Bacterial general secretion pathway protein D signature 658 676 1.3E-29 T 19-04-2016 IPR001775 GspD/PilQ family ALIDE2_RS03725 6597394b8eb33b7583d93e7443696b92 777 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 50 702 6.5E-183 T 19-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 ALIDE2_RS03725 6597394b8eb33b7583d93e7443696b92 777 PANTHER PTHR30332 46 764 7.3E-176 T 19-04-2016 ALIDE2_RS03725 6597394b8eb33b7583d93e7443696b92 777 Pfam PF00263 Bacterial type II and III secretion system protein 527 694 1.4E-50 T 19-04-2016 IPR004846 Type II/III secretion system GO:0009306 ALIDE2_RS18510 5bd5096a74aa375e7128376363d7e3c4 355 PANTHER PTHR33376 1 283 7.3E-20 T 19-04-2016 ALIDE2_RS18510 5bd5096a74aa375e7128376363d7e3c4 355 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 50 273 1.9E-18 T 19-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 Pfam PF04324 BFD-like [2Fe-2S] binding domain 493 543 2.4E-13 T 19-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 Pfam PF04324 BFD-like [2Fe-2S] binding domain 429 476 1.3E-13 T 19-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 Gene3D G3DSA:3.30.413.10 638 774 1.1E-34 T 19-04-2016 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 PANTHER PTHR22912:SF1 1 421 5.4E-151 T 19-04-2016 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 568 629 5.3E-14 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 SUPERFAMILY SSF51905 4 196 1.3E-41 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 638 773 2.5E-24 T 19-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 287 4.5E-54 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 Gene3D G3DSA:3.50.50.60 3 115 2.6E-25 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 SUPERFAMILY SSF51905 150 317 2.07E-30 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 240 254 5.7E-12 T 19-04-2016 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.7E-12 T 19-04-2016 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 280 287 5.7E-12 T 19-04-2016 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 177 5.7E-12 T 19-04-2016 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 PRINTS PR00397 Sirohaem Fe-binding site signature 642 660 1.2E-7 T 19-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 PRINTS PR00397 Sirohaem Fe-binding site signature 685 703 1.2E-7 T 19-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 Gene3D G3DSA:3.50.50.60 116 312 5.5E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 5.7E-20 T 19-04-2016 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.7E-20 T 19-04-2016 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 5.7E-20 T 19-04-2016 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 5.7E-20 T 19-04-2016 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 5.7E-20 T 19-04-2016 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 PIRSF PIRSF037149 1 814 0.0 T 19-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 PANTHER PTHR22912 1 421 5.4E-151 T 19-04-2016 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 7 799 1.4E-272 T 19-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 SUPERFAMILY SSF55124 527 629 5.23E-23 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 685 701 - T 19-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 ALIDE2_RS12885 7ffefdf93c133ecbd14bf345847d8dcf 816 SUPERFAMILY SSF56014 639 803 6.28E-49 T 19-04-2016 ALIDE2_RS22440 1b8f4dae4d36071e8077521bfeabe2d5 117 PANTHER PTHR13943 2 96 1.5E-26 T 19-04-2016 ALIDE2_RS22440 1b8f4dae4d36071e8077521bfeabe2d5 117 PANTHER PTHR13943:SF48 2 96 1.5E-26 T 19-04-2016 ALIDE2_RS08085 a8bc29190b04f3407d8894e58345df42 127 PIRSF PIRSF018634 2 125 9.5E-32 T 19-04-2016 IPR009387 Toxin HigB-2 ALIDE2_RS08085 a8bc29190b04f3407d8894e58345df42 127 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 3 121 2.6E-43 T 19-04-2016 IPR009387 Toxin HigB-2 ALIDE2_RS09335 81e12197b680e87c7d29590898b2446a 278 SUPERFAMILY SSF52096 9 263 4.98E-73 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS09335 81e12197b680e87c7d29590898b2446a 278 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 241 8.8E-51 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS09335 81e12197b680e87c7d29590898b2446a 278 PANTHER PTHR11941 1 268 4.2E-71 T 19-04-2016 ALIDE2_RS09335 81e12197b680e87c7d29590898b2446a 278 Gene3D G3DSA:3.90.226.10 8 263 7.8E-74 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 120 136 7.8E-26 T 19-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 274 293 7.8E-26 T 19-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 184 196 7.8E-26 T 19-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 PANTHER PTHR12383:SF27 255 320 1.1E-80 T 19-04-2016 ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 PANTHER PTHR12383:SF27 29 231 1.1E-80 T 19-04-2016 ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 Pfam PF00717 Peptidase S24-like 126 208 8.2E-21 T 19-04-2016 IPR019759 Peptidase S24/S26A/S26B ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 105 313 1.7E-50 T 19-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 ProSitePatterns PS00761 Signal peptidases I signature 3. 279 292 - T 19-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 SUPERFAMILY SSF51306 118 320 1.18E-70 T 19-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 PANTHER PTHR12383 255 320 1.1E-80 T 19-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 PANTHER PTHR12383 29 231 1.1E-80 T 19-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 Gene3D G3DSA:2.10.109.10 274 320 1.4E-56 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 Gene3D G3DSA:2.10.109.10 116 193 1.4E-56 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 Gene3D G3DSA:2.170.230.10 194 250 3.3E-5 T 19-04-2016 IPR019766 Peptidase S26A, all-beta subdomain ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 Pfam PF10502 Signal peptidase, peptidase S26 272 311 1.0E-7 T 19-04-2016 IPR019533 Peptidase S26 ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 ProSitePatterns PS00760 Signal peptidases I lysine active site. 186 198 - T 19-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 ALIDE2_RS06345 ef8e7f1015aa574dc8b400a4b6d19246 324 ProSitePatterns PS00501 Signal peptidases I serine active site. 129 136 - T 19-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 ALIDE2_RS12570 369e644521cc5a6147a93f9062ae397a 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 5 51 1.3E-11 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS12570 369e644521cc5a6147a93f9062ae397a 213 SUPERFAMILY SSF48498 73 184 3.34E-13 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS12570 369e644521cc5a6147a93f9062ae397a 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 49 1.5E-8 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS12570 369e644521cc5a6147a93f9062ae397a 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 5 18 1.5E-8 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS12570 369e644521cc5a6147a93f9062ae397a 213 Gene3D G3DSA:1.10.357.10 49 193 1.3E-27 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS12570 369e644521cc5a6147a93f9062ae397a 213 PANTHER PTHR30055 5 204 1.6E-26 T 19-04-2016 ALIDE2_RS12570 369e644521cc5a6147a93f9062ae397a 213 PANTHER PTHR30055:SF56 5 204 1.6E-26 T 19-04-2016 ALIDE2_RS12570 369e644521cc5a6147a93f9062ae397a 213 SUPERFAMILY SSF46689 4 65 2.82E-13 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS12570 369e644521cc5a6147a93f9062ae397a 213 Gene3D G3DSA:1.10.10.60 4 48 2.0E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS13635 746fe41eb89f64fa997e1068408ce746 426 PANTHER PTHR39084 13 426 9.9E-60 T 19-04-2016 ALIDE2_RS13635 746fe41eb89f64fa997e1068408ce746 426 Pfam PF02308 MgtC family 13 138 1.4E-16 T 19-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ALIDE2_RS13635 746fe41eb89f64fa997e1068408ce746 426 Pfam PF13194 Domain of unknown function (DUF4010) 186 396 5.8E-58 T 19-04-2016 IPR025105 Domain of unknown function DUF4010 ALIDE2_RS09320 abd6ba6a64367a2b3ed1a540c17dfcc2 164 PANTHER PTHR13078 1 164 2.5E-19 T 19-04-2016 ALIDE2_RS09320 abd6ba6a64367a2b3ed1a540c17dfcc2 164 SUPERFAMILY SSF54637 14 162 3.32E-29 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS09320 abd6ba6a64367a2b3ed1a540c17dfcc2 164 Gene3D G3DSA:3.10.129.10 14 162 4.4E-32 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS09320 abd6ba6a64367a2b3ed1a540c17dfcc2 164 Pfam PF13452 N-terminal half of MaoC dehydratase 26 151 7.2E-10 T 19-04-2016 ALIDE2_RS05405 04740dbeb68f6b705daca841c175e90e 77 Pfam PF13560 Helix-turn-helix domain 10 69 1.8E-14 T 19-04-2016 ALIDE2_RS05405 04740dbeb68f6b705daca841c175e90e 77 Gene3D G3DSA:1.10.260.40 9 72 1.1E-17 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS05405 04740dbeb68f6b705daca841c175e90e 77 SUPERFAMILY SSF47413 8 72 6.44E-16 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS05405 04740dbeb68f6b705daca841c175e90e 77 SMART SM00530 14 69 5.2E-14 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS11925 db352d31d9ca880618a6ecae09203ef2 808 Pfam PF04055 Radical SAM superfamily 426 631 2.7E-19 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ALIDE2_RS11925 db352d31d9ca880618a6ecae09203ef2 808 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 33 695 1.9E-248 T 19-04-2016 IPR022946 Uncharacterised protein family UPF0313 ALIDE2_RS11925 db352d31d9ca880618a6ecae09203ef2 808 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 32 747 47.234 T 19-04-2016 IPR022946 Uncharacterised protein family UPF0313 ALIDE2_RS11925 db352d31d9ca880618a6ecae09203ef2 808 PANTHER PTHR32331 12 264 0.0 T 19-04-2016 ALIDE2_RS11925 db352d31d9ca880618a6ecae09203ef2 808 PANTHER PTHR32331 294 779 0.0 T 19-04-2016 ALIDE2_RS11925 db352d31d9ca880618a6ecae09203ef2 808 Pfam PF08497 Radical SAM N-terminal 33 425 1.7E-138 T 19-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal ALIDE2_RS11925 db352d31d9ca880618a6ecae09203ef2 808 Gene3D G3DSA:3.80.30.20 420 677 8.1E-49 T 19-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe ALIDE2_RS11925 db352d31d9ca880618a6ecae09203ef2 808 SMART SM00729 422 673 4.3E-6 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ALIDE2_RS11925 db352d31d9ca880618a6ecae09203ef2 808 SUPERFAMILY SSF102114 422 486 2.09E-11 T 19-04-2016 ALIDE2_RS11925 db352d31d9ca880618a6ecae09203ef2 808 SUPERFAMILY SSF102114 516 665 2.09E-11 T 19-04-2016 ALIDE2_RS11925 db352d31d9ca880618a6ecae09203ef2 808 Pfam PF11842 Domain of unknown function (DUF3362) 640 805 8.0E-63 T 19-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal ALIDE2_RS11925 db352d31d9ca880618a6ecae09203ef2 808 PANTHER PTHR32331:SF3 12 264 0.0 T 19-04-2016 ALIDE2_RS11925 db352d31d9ca880618a6ecae09203ef2 808 PANTHER PTHR32331:SF3 294 779 0.0 T 19-04-2016 ALIDE2_RS11925 db352d31d9ca880618a6ecae09203ef2 808 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 426 446 - T 19-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 ALIDE2_RS08535 bd62be2fa4ca3521eb94d803c80f1058 267 PANTHER PTHR30502:SF5 5 250 1.7E-110 T 19-04-2016 ALIDE2_RS08535 bd62be2fa4ca3521eb94d803c80f1058 267 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 17 242 2.1E-59 T 19-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ALIDE2_RS08535 bd62be2fa4ca3521eb94d803c80f1058 267 Gene3D G3DSA:3.20.20.60 4 252 4.6E-79 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS08535 bd62be2fa4ca3521eb94d803c80f1058 267 SUPERFAMILY SSF51621 2 251 5.02E-80 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS08535 bd62be2fa4ca3521eb94d803c80f1058 267 PANTHER PTHR30502 5 250 1.7E-110 T 19-04-2016 ALIDE2_RS03030 4e59c000ba3fd1fc4d9ee11ce1196b00 296 PANTHER PTHR22572:SF105 7 274 3.1E-181 T 19-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 ALIDE2_RS03030 4e59c000ba3fd1fc4d9ee11ce1196b00 296 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 7 291 2.0E-158 T 19-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 ALIDE2_RS03030 4e59c000ba3fd1fc4d9ee11ce1196b00 296 Pfam PF00483 Nucleotidyl transferase 7 243 2.5E-70 T 19-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 ALIDE2_RS03030 4e59c000ba3fd1fc4d9ee11ce1196b00 296 SUPERFAMILY SSF53448 6 291 1.4E-93 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS03030 4e59c000ba3fd1fc4d9ee11ce1196b00 296 Gene3D G3DSA:3.90.550.10 6 267 8.7E-69 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS03030 4e59c000ba3fd1fc4d9ee11ce1196b00 296 PANTHER PTHR22572 7 274 3.1E-181 T 19-04-2016 ALIDE2_RS15930 f655234f1fe33655acce27ce4497b93d 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 4.9E-16 T 19-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 ALIDE2_RS15930 f655234f1fe33655acce27ce4497b93d 335 PANTHER PTHR30146 4 332 6.0E-87 T 19-04-2016 ALIDE2_RS15930 f655234f1fe33655acce27ce4497b93d 335 SUPERFAMILY SSF53822 63 333 4.12E-52 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS15930 f655234f1fe33655acce27ce4497b93d 335 Gene3D G3DSA:3.40.50.2300 170 333 4.3E-43 T 19-04-2016 ALIDE2_RS15930 f655234f1fe33655acce27ce4497b93d 335 SMART SM00354 4 74 2.4E-24 T 19-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 ALIDE2_RS15930 f655234f1fe33655acce27ce4497b93d 335 Gene3D G3DSA:3.40.50.2300 64 169 6.7E-26 T 19-04-2016 ALIDE2_RS15930 f655234f1fe33655acce27ce4497b93d 335 SUPERFAMILY SSF47413 4 62 4.97E-17 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS15930 f655234f1fe33655acce27ce4497b93d 335 Pfam PF13377 Periplasmic binding protein-like domain 171 332 1.2E-25 T 19-04-2016 ALIDE2_RS15930 f655234f1fe33655acce27ce4497b93d 335 Gene3D G3DSA:1.10.260.40 5 63 3.8E-24 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS15930 f655234f1fe33655acce27ce4497b93d 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 19-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 ALIDE2_RS10770 7940d5473fe621d3d66a89d7eabd86ff 688 Gene3D G3DSA:3.90.1530.10 21 129 1.5E-16 T 19-04-2016 ALIDE2_RS10770 7940d5473fe621d3d66a89d7eabd86ff 688 SUPERFAMILY SSF110849 29 126 9.68E-13 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS10770 7940d5473fe621d3d66a89d7eabd86ff 688 PANTHER PTHR33375 29 680 2.3E-84 T 19-04-2016 ALIDE2_RS10770 7940d5473fe621d3d66a89d7eabd86ff 688 SUPERFAMILY SSF109709 118 221 8.37E-19 T 19-04-2016 ALIDE2_RS10770 7940d5473fe621d3d66a89d7eabd86ff 688 SMART SM00470 27 124 4.9E-16 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS10770 7940d5473fe621d3d66a89d7eabd86ff 688 Pfam PF02195 ParB-like nuclease domain 29 111 1.2E-11 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS10770 7940d5473fe621d3d66a89d7eabd86ff 688 Gene3D G3DSA:1.10.287.40 320 382 8.6E-4 T 19-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 ALIDE2_RS10770 7940d5473fe621d3d66a89d7eabd86ff 688 PANTHER PTHR33375:SF2 29 680 2.3E-84 T 19-04-2016 ALIDE2_RS10110 5204799d65a4a95f0379365701bafe45 334 Pfam PF03864 Phage major capsid protein E 10 332 8.7E-115 T 19-04-2016 IPR005564 Major capsid protein GpE GO:0019028 ALIDE2_RS18570 75336936a5d20e20147809fa153bbf28 343 Gene3D G3DSA:1.10.8.300 205 320 2.9E-36 T 19-04-2016 ALIDE2_RS18570 75336936a5d20e20147809fa153bbf28 343 PANTHER PTHR11603 6 326 6.6E-124 T 19-04-2016 ALIDE2_RS18570 75336936a5d20e20147809fa153bbf28 343 PANTHER PTHR11603:SF148 6 326 6.6E-124 T 19-04-2016 ALIDE2_RS18570 75336936a5d20e20147809fa153bbf28 343 Gene3D G3DSA:3.40.50.300 26 188 1.4E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18570 75336936a5d20e20147809fa153bbf28 343 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 45 175 2.3E-63 T 19-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 ALIDE2_RS18570 75336936a5d20e20147809fa153bbf28 343 SUPERFAMILY SSF52540 9 299 2.72E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18570 75336936a5d20e20147809fa153bbf28 343 PIRSF PIRSF002849 1 326 9.9E-128 T 19-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted ALIDE2_RS02510 7386bbeee536c66524cbd2074488802d 643 Gene3D G3DSA:2.30.38.10 405 463 6.3E-16 T 19-04-2016 ALIDE2_RS02510 7386bbeee536c66524cbd2074488802d 643 PANTHER PTHR24096:SF151 3 608 1.7E-197 T 19-04-2016 ALIDE2_RS02510 7386bbeee536c66524cbd2074488802d 643 Pfam PF00501 AMP-binding enzyme 11 469 5.2E-87 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS02510 7386bbeee536c66524cbd2074488802d 643 PANTHER PTHR24096 3 608 1.7E-197 T 19-04-2016 ALIDE2_RS02510 7386bbeee536c66524cbd2074488802d 643 SUPERFAMILY SSF56801 339 603 5.76E-106 T 19-04-2016 ALIDE2_RS02510 7386bbeee536c66524cbd2074488802d 643 SUPERFAMILY SSF56801 3 287 5.76E-106 T 19-04-2016 ALIDE2_RS02510 7386bbeee536c66524cbd2074488802d 643 Gene3D G3DSA:3.40.50.980 336 398 2.4E-24 T 19-04-2016 ALIDE2_RS02510 7386bbeee536c66524cbd2074488802d 643 Gene3D G3DSA:3.40.50.980 191 282 2.4E-24 T 19-04-2016 ALIDE2_RS02510 7386bbeee536c66524cbd2074488802d 643 Gene3D G3DSA:3.40.50.980 3 190 4.6E-29 T 19-04-2016 ALIDE2_RS02510 7386bbeee536c66524cbd2074488802d 643 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS18335 72ad2e6889680b70a5fe76c62bd83cba 439 SUPERFAMILY SSF52540 9 226 2.28E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18335 72ad2e6889680b70a5fe76c62bd83cba 439 SMART SM00382 45 163 4.7E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS18335 72ad2e6889680b70a5fe76c62bd83cba 439 Gene3D G3DSA:1.10.3710.10 339 430 5.4E-33 T 19-04-2016 ALIDE2_RS18335 72ad2e6889680b70a5fe76c62bd83cba 439 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 50 158 2.2E-13 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS18335 72ad2e6889680b70a5fe76c62bd83cba 439 Pfam PF16193 AAA C-terminal domain 184 257 1.6E-22 T 19-04-2016 IPR032423 AAA ATPase, C-terminal domain ALIDE2_RS18335 72ad2e6889680b70a5fe76c62bd83cba 439 SUPERFAMILY SSF48019 242 424 1.93E-75 T 19-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 ALIDE2_RS18335 72ad2e6889680b70a5fe76c62bd83cba 439 Gene3D G3DSA:3.40.50.300 8 151 4.6E-28 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18335 72ad2e6889680b70a5fe76c62bd83cba 439 Pfam PF12002 MgsA AAA+ ATPase C terminal 258 424 6.5E-68 T 19-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal ALIDE2_RS18335 72ad2e6889680b70a5fe76c62bd83cba 439 PANTHER PTHR13779 7 439 1.4E-188 T 19-04-2016 ALIDE2_RS18335 72ad2e6889680b70a5fe76c62bd83cba 439 PANTHER PTHR13779:SF7 7 439 1.4E-188 T 19-04-2016 ALIDE2_RS18335 72ad2e6889680b70a5fe76c62bd83cba 439 Gene3D G3DSA:1.20.272.10 239 337 5.7E-46 T 19-04-2016 ALIDE2_RS18335 72ad2e6889680b70a5fe76c62bd83cba 439 Gene3D G3DSA:1.10.8.60 152 223 7.8E-10 T 19-04-2016 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 Gene3D G3DSA:3.30.470.20 199 364 2.5E-58 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 Gene3D G3DSA:3.20.20.60 488 795 1.1E-99 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 Gene3D G3DSA:3.30.1490.20 9 197 2.0E-65 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 421 432 - T 19-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 Gene3D G3DSA:3.50.30.10 380 481 1.4E-37 T 19-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 SUPERFAMILY SSF56059 8 251 1.08E-106 T 19-04-2016 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 SUPERFAMILY SSF56059 279 392 1.08E-106 T 19-04-2016 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 PIRSF PIRSF000854 5 796 0.0 T 19-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 352 1.6E-116 T 19-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 795 0.0 T 19-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 486 793 2.2E-59 T 19-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 PANTHER PTHR22931 1 271 0.0 T 19-04-2016 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 PANTHER PTHR22931 290 795 0.0 T 19-04-2016 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 Pfam PF00391 PEP-utilising enzyme, mobile domain 391 462 2.9E-26 T 19-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 701 719 - T 19-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 PANTHER PTHR22931:SF7 1 271 0.0 T 19-04-2016 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 PANTHER PTHR22931:SF7 290 795 0.0 T 19-04-2016 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 SUPERFAMILY SSF52009 354 474 5.49E-35 T 19-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ALIDE2_RS08315 829a302bcb173481bc6f9830a9105040 796 SUPERFAMILY SSF51621 471 795 1.07E-93 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS11955 e4d7e72222acf324ea70dfe140ed0457 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 19-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site ALIDE2_RS11955 e4d7e72222acf324ea70dfe140ed0457 107 SUPERFAMILY SSF89360 1 95 1.19E-31 T 19-04-2016 IPR000361 FeS cluster biogenesis ALIDE2_RS11955 e4d7e72222acf324ea70dfe140ed0457 107 PANTHER PTHR10072:SF48 1 107 2.0E-49 T 19-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 ALIDE2_RS11955 e4d7e72222acf324ea70dfe140ed0457 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.7E-22 T 19-04-2016 IPR000361 FeS cluster biogenesis ALIDE2_RS11955 e4d7e72222acf324ea70dfe140ed0457 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.3E-53 T 19-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 ALIDE2_RS11955 e4d7e72222acf324ea70dfe140ed0457 107 Gene3D G3DSA:2.60.300.12 2 95 2.9E-34 T 19-04-2016 IPR000361 FeS cluster biogenesis ALIDE2_RS11955 e4d7e72222acf324ea70dfe140ed0457 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 5.1E-36 T 19-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 ALIDE2_RS11955 e4d7e72222acf324ea70dfe140ed0457 107 PANTHER PTHR10072 1 107 2.0E-49 T 19-04-2016 ALIDE2_RS02430 93506a955a59be00d9c759deed7552a1 291 SUPERFAMILY SSF51621 10 241 3.14E-58 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS02430 93506a955a59be00d9c759deed7552a1 291 PANTHER PTHR32308:SF0 11 291 8.0E-77 T 19-04-2016 ALIDE2_RS02430 93506a955a59be00d9c759deed7552a1 291 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 12 231 7.9E-42 T 19-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ALIDE2_RS02430 93506a955a59be00d9c759deed7552a1 291 Gene3D G3DSA:3.20.20.60 10 242 3.9E-67 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS02430 93506a955a59be00d9c759deed7552a1 291 PANTHER PTHR32308 11 291 8.0E-77 T 19-04-2016 IPR011206 Citrate lyase beta subunit-like ALIDE2_RS02430 93506a955a59be00d9c759deed7552a1 291 PIRSF PIRSF015582 1 291 7.3E-70 T 19-04-2016 IPR011206 Citrate lyase beta subunit-like ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 PANTHER PTHR10422:SF26 45 623 0.0 T 19-04-2016 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 SUPERFAMILY SSF81442 55 569 8.9E-171 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 290 344 - T 19-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 68 513 2.5E-134 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 13 656 0.0 T 19-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 59 84 9.3E-87 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 237 256 9.3E-87 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 471 492 9.3E-87 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 393 411 9.3E-87 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 208 226 9.3E-87 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 379 9.3E-87 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 334 349 9.3E-87 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 109 132 9.3E-87 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 421 440 9.3E-87 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 288 309 9.3E-87 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 136 160 9.3E-87 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 PANTHER PTHR10422 45 623 0.0 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS11195 cfc6ccdb174dc6128d6bc6df26308a46 668 Gene3D G3DSA:1.20.210.10 53 584 1.4E-179 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS12970 0f9e771feb884cf6a445db75e03a64ee 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 20.093 T 19-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS12970 0f9e771feb884cf6a445db75e03a64ee 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.4E-14 T 19-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS12970 0f9e771feb884cf6a445db75e03a64ee 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.4E-14 T 19-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS12970 0f9e771feb884cf6a445db75e03a64ee 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.4E-14 T 19-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS12970 0f9e771feb884cf6a445db75e03a64ee 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.4E-14 T 19-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS12970 0f9e771feb884cf6a445db75e03a64ee 70 PANTHER PTHR21109 1 59 4.8E-22 T 19-04-2016 ALIDE2_RS12970 0f9e771feb884cf6a445db75e03a64ee 70 Pfam PF01165 Ribosomal protein S21 3 57 4.5E-20 T 19-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS12970 0f9e771feb884cf6a445db75e03a64ee 70 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 19-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS12970 0f9e771feb884cf6a445db75e03a64ee 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 42 3.0E-8 T 19-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS12970 0f9e771feb884cf6a445db75e03a64ee 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 5.4E-24 T 19-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01140 e34474c4fde3f99cd0909b2a04d3fb06 370 Pfam PF01565 FAD binding domain 7 136 2.1E-20 T 19-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ALIDE2_RS01140 e34474c4fde3f99cd0909b2a04d3fb06 370 Gene3D G3DSA:1.10.45.10 337 368 4.6E-7 T 19-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ALIDE2_RS01140 e34474c4fde3f99cd0909b2a04d3fb06 370 SUPERFAMILY SSF55103 137 369 7.33E-18 T 19-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ALIDE2_RS01140 e34474c4fde3f99cd0909b2a04d3fb06 370 PANTHER PTHR11748:SF1 5 370 5.3E-68 T 19-04-2016 ALIDE2_RS01140 e34474c4fde3f99cd0909b2a04d3fb06 370 SUPERFAMILY SSF56176 7 174 4.67E-36 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS01140 e34474c4fde3f99cd0909b2a04d3fb06 370 Gene3D G3DSA:3.30.465.10 53 174 1.5E-25 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ALIDE2_RS01140 e34474c4fde3f99cd0909b2a04d3fb06 370 PANTHER PTHR11748 5 370 5.3E-68 T 19-04-2016 ALIDE2_RS01140 e34474c4fde3f99cd0909b2a04d3fb06 370 Pfam PF02913 FAD linked oxidases, C-terminal domain 339 368 4.0E-5 T 19-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ALIDE2_RS17000 bb0c5df3706707a5d22e82127c625480 215 PANTHER PTHR41535:SF1 93 211 9.2E-21 T 19-04-2016 ALIDE2_RS17000 bb0c5df3706707a5d22e82127c625480 215 SUPERFAMILY SSF50630 99 203 1.29E-17 T 19-04-2016 IPR021109 Aspartic peptidase domain ALIDE2_RS17000 bb0c5df3706707a5d22e82127c625480 215 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 96 212 4.5E-32 T 19-04-2016 IPR011969 Clan AA aspartic peptidase, C-terminal ALIDE2_RS17000 bb0c5df3706707a5d22e82127c625480 215 Pfam PF13975 gag-polyprotein putative aspartyl protease 110 198 2.7E-23 T 19-04-2016 ALIDE2_RS17000 bb0c5df3706707a5d22e82127c625480 215 PANTHER PTHR41535 93 211 9.2E-21 T 19-04-2016 ALIDE2_RS08560 0891d4d79c9685f15ea1a49b6d4a54c9 339 Pfam PF01734 Patatin-like phospholipase 45 201 9.0E-26 T 19-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 ALIDE2_RS08560 0891d4d79c9685f15ea1a49b6d4a54c9 339 SUPERFAMILY SSF52151 35 291 1.23E-55 T 19-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 ALIDE2_RS08560 0891d4d79c9685f15ea1a49b6d4a54c9 339 Gene3D G3DSA:3.40.1090.10 44 201 1.5E-12 T 19-04-2016 ALIDE2_RS08560 0891d4d79c9685f15ea1a49b6d4a54c9 339 PANTHER PTHR14226 41 295 4.9E-84 T 19-04-2016 ALIDE2_RS08560 0891d4d79c9685f15ea1a49b6d4a54c9 339 PANTHER PTHR14226:SF24 41 295 4.9E-84 T 19-04-2016 ALIDE2_RS00435 e4e539d3b074df0cc8d373e07a6137c7 262 SUPERFAMILY SSF52096 3 262 2.2E-81 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS00435 e4e539d3b074df0cc8d373e07a6137c7 262 Gene3D G3DSA:3.90.226.10 3 262 7.0E-82 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS00435 e4e539d3b074df0cc8d373e07a6137c7 262 PANTHER PTHR11941 3 261 7.6E-85 T 19-04-2016 ALIDE2_RS00435 e4e539d3b074df0cc8d373e07a6137c7 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 262 3.2E-59 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS10415 a24c2418e94e64fb3af32e2b02b35308 307 PANTHER PTHR11260 167 187 1.6E-30 T 19-04-2016 ALIDE2_RS10415 a24c2418e94e64fb3af32e2b02b35308 307 SUPERFAMILY SSF47616 90 215 5.85E-10 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS10415 a24c2418e94e64fb3af32e2b02b35308 307 PANTHER PTHR11260 3 148 1.6E-30 T 19-04-2016 ALIDE2_RS10415 a24c2418e94e64fb3af32e2b02b35308 307 Gene3D G3DSA:1.20.1050.10 130 215 9.6E-9 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS10415 a24c2418e94e64fb3af32e2b02b35308 307 Gene3D G3DSA:3.40.30.10 3 99 6.3E-10 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS10415 a24c2418e94e64fb3af32e2b02b35308 307 SUPERFAMILY SSF52833 4 102 4.67E-15 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS10415 a24c2418e94e64fb3af32e2b02b35308 307 Pfam PF13410 Glutathione S-transferase, C-terminal domain 148 211 4.1E-8 T 19-04-2016 ALIDE2_RS10415 a24c2418e94e64fb3af32e2b02b35308 307 PANTHER PTHR11260:SF192 3 148 1.6E-30 T 19-04-2016 ALIDE2_RS10415 a24c2418e94e64fb3af32e2b02b35308 307 PANTHER PTHR11260:SF192 167 187 1.6E-30 T 19-04-2016 ALIDE2_RS10415 a24c2418e94e64fb3af32e2b02b35308 307 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 80 6.1E-13 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ALIDE2_RS18555 165904eb36498ae10f450ca6a4c0125f 93 SMART SM00418 10 89 7.2E-24 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS18555 165904eb36498ae10f450ca6a4c0125f 93 Gene3D G3DSA:1.10.10.10 1 92 1.1E-31 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18555 165904eb36498ae10f450ca6a4c0125f 93 Pfam PF01022 Bacterial regulatory protein, arsR family 17 63 1.5E-14 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS18555 165904eb36498ae10f450ca6a4c0125f 93 PANTHER PTHR33154:SF10 1 93 5.6E-29 T 19-04-2016 ALIDE2_RS18555 165904eb36498ae10f450ca6a4c0125f 93 PANTHER PTHR33154 1 93 5.6E-29 T 19-04-2016 ALIDE2_RS18555 165904eb36498ae10f450ca6a4c0125f 93 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 6.46E-11 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS18555 165904eb36498ae10f450ca6a4c0125f 93 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 6.46E-11 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS18555 165904eb36498ae10f450ca6a4c0125f 93 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 6.46E-11 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS18555 165904eb36498ae10f450ca6a4c0125f 93 SUPERFAMILY SSF46785 5 92 1.5E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00600 dd97b48a6bb5f7a1cf7231664b1cf15c 769 SUPERFAMILY SSF81442 282 757 1.7E-75 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS00600 dd97b48a6bb5f7a1cf7231664b1cf15c 769 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 288 733 1.6E-67 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS05330 90391b890bb1d3142144c645bc3bde2c 322 SUPERFAMILY SSF53850 30 277 6.88E-5 T 19-04-2016 ALIDE2_RS05330 90391b890bb1d3142144c645bc3bde2c 322 PIRSF PIRSF017082 4 321 1.2E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS05330 90391b890bb1d3142144c645bc3bde2c 322 PANTHER PTHR30349:SF16 1 314 8.5E-69 T 19-04-2016 ALIDE2_RS05330 90391b890bb1d3142144c645bc3bde2c 322 PANTHER PTHR30349 1 314 8.5E-69 T 19-04-2016 ALIDE2_RS05330 90391b890bb1d3142144c645bc3bde2c 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 318 7.9E-79 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS04155 58d4a37b146aa3ed38da622e3de3f682 222 PANTHER PTHR21235 8 220 1.7E-76 T 19-04-2016 ALIDE2_RS04155 58d4a37b146aa3ed38da622e3de3f682 222 Gene3D G3DSA:3.40.50.880 6 220 8.9E-78 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS04155 58d4a37b146aa3ed38da622e3de3f682 222 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 7 220 34.62 T 19-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 ALIDE2_RS04155 58d4a37b146aa3ed38da622e3de3f682 222 PIRSF PIRSF000495 6 222 5.4E-65 T 19-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 ALIDE2_RS04155 58d4a37b146aa3ed38da622e3de3f682 222 SUPERFAMILY SSF52317 5 220 3.82E-52 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS04155 58d4a37b146aa3ed38da622e3de3f682 222 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 8 219 6.0E-59 T 19-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 ALIDE2_RS04155 58d4a37b146aa3ed38da622e3de3f682 222 PANTHER PTHR21235:SF1 8 220 1.7E-76 T 19-04-2016 ALIDE2_RS04155 58d4a37b146aa3ed38da622e3de3f682 222 Pfam PF00117 Glutamine amidotransferase class-I 47 217 3.1E-14 T 19-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 ALIDE2_RS10470 6332d2bffb66d3c8551eea60c5f4cf74 387 PANTHER PTHR30349 1 374 2.1E-114 T 19-04-2016 ALIDE2_RS10470 6332d2bffb66d3c8551eea60c5f4cf74 387 SUPERFAMILY SSF54506 181 384 4.39E-76 T 19-04-2016 ALIDE2_RS10470 6332d2bffb66d3c8551eea60c5f4cf74 387 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 5 385 2.7E-214 T 19-04-2016 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 UniPathway: UPA00946 ALIDE2_RS10470 6332d2bffb66d3c8551eea60c5f4cf74 387 SUPERFAMILY SSF54506 3 177 2.12E-68 T 19-04-2016 ALIDE2_RS10470 6332d2bffb66d3c8551eea60c5f4cf74 387 Gene3D G3DSA:3.10.310.10 3 188 8.5E-87 T 19-04-2016 ALIDE2_RS10470 6332d2bffb66d3c8551eea60c5f4cf74 387 Gene3D G3DSA:3.10.310.10 189 367 1.9E-79 T 19-04-2016 ALIDE2_RS10470 6332d2bffb66d3c8551eea60c5f4cf74 387 Pfam PF04303 PrpF protein 6 384 1.2E-170 T 19-04-2016 IPR007400 PrpF protein ALIDE2_RS10470 6332d2bffb66d3c8551eea60c5f4cf74 387 PANTHER PTHR30349:SF21 1 374 2.1E-114 T 19-04-2016 ALIDE2_RS17040 d8c3e74396f9482f28f162490a41891f 310 Gene3D G3DSA:3.40.50.1820 11 304 7.5E-52 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS17040 d8c3e74396f9482f28f162490a41891f 310 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 1.4E-7 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS17040 d8c3e74396f9482f28f162490a41891f 310 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 1.4E-7 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS17040 d8c3e74396f9482f28f162490a41891f 310 PRINTS PR00111 Alpha/beta hydrolase fold signature 62 77 1.4E-7 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS17040 d8c3e74396f9482f28f162490a41891f 310 Pfam PF00561 alpha/beta hydrolase fold 33 290 1.3E-23 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS17040 d8c3e74396f9482f28f162490a41891f 310 PANTHER PTHR10992 239 305 1.9E-32 T 19-04-2016 ALIDE2_RS17040 d8c3e74396f9482f28f162490a41891f 310 PANTHER PTHR10992 9 192 1.9E-32 T 19-04-2016 ALIDE2_RS17040 d8c3e74396f9482f28f162490a41891f 310 SUPERFAMILY SSF53474 10 304 1.89E-47 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS17040 d8c3e74396f9482f28f162490a41891f 310 PRINTS PR00412 Epoxide hydrolase signature 62 77 2.0E-8 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS17040 d8c3e74396f9482f28f162490a41891f 310 PRINTS PR00412 Epoxide hydrolase signature 39 57 2.0E-8 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS17040 d8c3e74396f9482f28f162490a41891f 310 PRINTS PR00412 Epoxide hydrolase signature 123 136 2.0E-8 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS17040 d8c3e74396f9482f28f162490a41891f 310 PRINTS PR00412 Epoxide hydrolase signature 280 302 2.0E-8 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS14185 67357a74c44b767ad09b9144e93a09da 127 PANTHER PTHR33993:SF4 1 127 2.4E-42 T 19-04-2016 ALIDE2_RS14185 67357a74c44b767ad09b9144e93a09da 127 PANTHER PTHR33993 1 127 2.4E-42 T 19-04-2016 ALIDE2_RS14185 67357a74c44b767ad09b9144e93a09da 127 SUPERFAMILY SSF54593 1 126 3.09E-18 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS14185 67357a74c44b767ad09b9144e93a09da 127 Gene3D G3DSA:3.10.180.10 6 126 3.6E-29 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS04540 b117b4ba1691e4c71972cffb7f3a1e3a 293 PANTHER PTHR32243 4 292 2.7E-106 T 19-04-2016 ALIDE2_RS04540 b117b4ba1691e4c71972cffb7f3a1e3a 293 PANTHER PTHR32243:SF13 4 292 2.7E-106 T 19-04-2016 ALIDE2_RS04540 b117b4ba1691e4c71972cffb7f3a1e3a 293 SUPERFAMILY SSF161098 55 282 2.09E-51 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS04540 b117b4ba1691e4c71972cffb7f3a1e3a 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 292 1.3E-18 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS04540 b117b4ba1691e4c71972cffb7f3a1e3a 293 Gene3D G3DSA:1.10.3720.10 8 284 2.5E-55 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS21200 dbcac4b7a18c0eac511a8c1575fab47d 599 ProSitePatterns PS00149 Sulfatases signature 2. 156 166 - T 19-04-2016 IPR024607 Sulfatase, conserved site ALIDE2_RS21200 dbcac4b7a18c0eac511a8c1575fab47d 599 Pfam PF00884 Sulfatase 54 462 3.0E-74 T 19-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 ALIDE2_RS21200 dbcac4b7a18c0eac511a8c1575fab47d 599 PANTHER PTHR10342:SF198 310 364 2.1E-127 T 19-04-2016 ALIDE2_RS21200 dbcac4b7a18c0eac511a8c1575fab47d 599 PANTHER PTHR10342:SF198 407 599 2.1E-127 T 19-04-2016 ALIDE2_RS21200 dbcac4b7a18c0eac511a8c1575fab47d 599 PANTHER PTHR10342:SF198 52 271 2.1E-127 T 19-04-2016 ALIDE2_RS21200 dbcac4b7a18c0eac511a8c1575fab47d 599 PANTHER PTHR10342:SF198 11 36 2.1E-127 T 19-04-2016 ALIDE2_RS21200 dbcac4b7a18c0eac511a8c1575fab47d 599 SUPERFAMILY SSF53649 54 564 5.23E-132 T 19-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 ALIDE2_RS21200 dbcac4b7a18c0eac511a8c1575fab47d 599 Gene3D G3DSA:3.30.1120.10 502 570 4.4E-17 T 19-04-2016 ALIDE2_RS21200 dbcac4b7a18c0eac511a8c1575fab47d 599 PANTHER PTHR10342 310 364 2.1E-127 T 19-04-2016 ALIDE2_RS21200 dbcac4b7a18c0eac511a8c1575fab47d 599 PANTHER PTHR10342 407 599 2.1E-127 T 19-04-2016 ALIDE2_RS21200 dbcac4b7a18c0eac511a8c1575fab47d 599 PANTHER PTHR10342 52 271 2.1E-127 T 19-04-2016 ALIDE2_RS21200 dbcac4b7a18c0eac511a8c1575fab47d 599 PANTHER PTHR10342 11 36 2.1E-127 T 19-04-2016 ALIDE2_RS21200 dbcac4b7a18c0eac511a8c1575fab47d 599 Gene3D G3DSA:3.40.720.10 51 488 3.1E-115 T 19-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 Pfam PF14559 Tetratricopeptide repeat 354 415 2.0E-6 T 19-04-2016 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 Gene3D G3DSA:1.25.40.10 171 348 5.9E-13 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 Gene3D G3DSA:1.25.40.10 93 134 5.9E-13 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 Gene3D G3DSA:1.25.40.10 349 570 1.1E-28 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 SMART SM00028 546 579 0.93 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 SMART SM00028 298 331 0.15 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 SMART SM00028 444 477 480.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 SMART SM00028 478 512 160.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 SMART SM00028 199 232 3.4 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 Pfam PF13432 Tetratricopeptide repeat 448 513 9.2E-7 T 19-04-2016 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 Pfam PF13432 Tetratricopeptide repeat 271 323 3.1E-7 T 19-04-2016 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 PANTHER PTHR23083:SF195 264 590 3.4E-34 T 19-04-2016 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 PANTHER PTHR23083:SF195 122 232 3.4E-34 T 19-04-2016 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 PANTHER PTHR23083:SF195 23 34 3.4E-34 T 19-04-2016 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 SUPERFAMILY SSF48452 419 579 3.98E-22 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 SUPERFAMILY SSF48452 198 340 6.96E-13 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 PANTHER PTHR23083 264 590 3.4E-34 T 19-04-2016 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 PANTHER PTHR23083 122 232 3.4E-34 T 19-04-2016 ALIDE2_RS04735 3f595c6807907d84b22be518e47616ff 593 PANTHER PTHR23083 23 34 3.4E-34 T 19-04-2016 ALIDE2_RS22350 bed0f1abd0bdd42f13c5f5a4ffcb6bcd 133 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 57 113 1.7E-15 T 19-04-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal ALIDE2_RS22350 bed0f1abd0bdd42f13c5f5a4ffcb6bcd 133 PANTHER PTHR34075 16 132 8.6E-25 T 19-04-2016 ALIDE2_RS22350 bed0f1abd0bdd42f13c5f5a4ffcb6bcd 133 SUPERFAMILY SSF50249 12 120 1.22E-31 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS22350 bed0f1abd0bdd42f13c5f5a4ffcb6bcd 133 PANTHER PTHR34075:SF2 16 132 8.6E-25 T 19-04-2016 ALIDE2_RS22350 bed0f1abd0bdd42f13c5f5a4ffcb6bcd 133 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 21 56 2.6E-14 T 19-04-2016 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal ALIDE2_RS09915 30b5b45ba8a29debc9b794d2cb17e908 225 Gene3D G3DSA:3.40.50.1000 4 25 4.1E-38 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS09915 30b5b45ba8a29debc9b794d2cb17e908 225 Gene3D G3DSA:3.40.50.1000 82 222 4.1E-38 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS09915 30b5b45ba8a29debc9b794d2cb17e908 225 SUPERFAMILY SSF56784 10 222 6.37E-55 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS09915 30b5b45ba8a29debc9b794d2cb17e908 225 PANTHER PTHR18901:SF24 1 222 1.6E-92 T 19-04-2016 ALIDE2_RS09915 30b5b45ba8a29debc9b794d2cb17e908 225 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 12 222 9.4E-51 T 19-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 ALIDE2_RS09915 30b5b45ba8a29debc9b794d2cb17e908 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 98 190 7.4E-8 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS09915 30b5b45ba8a29debc9b794d2cb17e908 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 186 8.2E-10 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS09915 30b5b45ba8a29debc9b794d2cb17e908 225 PANTHER PTHR18901 1 222 1.6E-92 T 19-04-2016 ALIDE2_RS09915 30b5b45ba8a29debc9b794d2cb17e908 225 Gene3D G3DSA:1.10.150.240 26 81 1.2E-5 T 19-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 ALIDE2_RS09915 30b5b45ba8a29debc9b794d2cb17e908 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 191 3.5E-31 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS13675 edd84d92a5a943f7daf2e0561037d306 221 SMART SM00862 146 220 1.1E-12 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS13675 edd84d92a5a943f7daf2e0561037d306 221 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 210 4.8E-100 T 19-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 ALIDE2_RS13675 edd84d92a5a943f7daf2e0561037d306 221 SMART SM00448 1 112 5.0E-44 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS13675 edd84d92a5a943f7daf2e0561037d306 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 205 3.9E-17 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS13675 edd84d92a5a943f7daf2e0561037d306 221 PANTHER PTHR26402 1 205 3.9E-101 T 19-04-2016 ALIDE2_RS13675 edd84d92a5a943f7daf2e0561037d306 221 Gene3D G3DSA:3.40.50.2300 1 120 8.4E-41 T 19-04-2016 ALIDE2_RS13675 edd84d92a5a943f7daf2e0561037d306 221 Gene3D G3DSA:1.10.10.10 124 206 2.4E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS13675 edd84d92a5a943f7daf2e0561037d306 221 Pfam PF00072 Response regulator receiver domain 3 113 1.8E-28 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS13675 edd84d92a5a943f7daf2e0561037d306 221 SUPERFAMILY SSF46894 122 205 2.47E-21 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS13675 edd84d92a5a943f7daf2e0561037d306 221 SUPERFAMILY SSF52172 1 127 3.98E-41 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS13675 edd84d92a5a943f7daf2e0561037d306 221 PANTHER PTHR26402:SF575 1 205 3.9E-101 T 19-04-2016 ALIDE2_RS00970 eaa9ff37c5c101ba231df6f6d84afa35 1029 TIGRFAM TIGR01865 cas_Csn1: CRISPR subtype II RNA-guided endonuclease Cas9 255 786 8.6E-53 T 19-04-2016 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 ALIDE2_RS00970 eaa9ff37c5c101ba231df6f6d84afa35 1029 Pfam PF13395 HNH endonuclease 604 657 1.3E-18 T 19-04-2016 IPR003615 HNH nuclease ALIDE2_RS00970 eaa9ff37c5c101ba231df6f6d84afa35 1029 Hamap MF_01480 CRISPR-associated endonuclease Cas9 [cas9]. 4 1026 18.395 T 19-04-2016 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 ALIDE2_RS04260 13d6d3d8c7fe5a39f27bdc55a1f39359 248 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 2 247 8.0E-55 T 19-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ALIDE2_RS04260 13d6d3d8c7fe5a39f27bdc55a1f39359 248 Gene3D G3DSA:3.40.1390.30 3 107 1.9E-33 T 19-04-2016 ALIDE2_RS04260 13d6d3d8c7fe5a39f27bdc55a1f39359 248 Gene3D G3DSA:3.40.1390.30 108 215 1.0E-26 T 19-04-2016 ALIDE2_RS04260 13d6d3d8c7fe5a39f27bdc55a1f39359 248 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 234 2.3E-52 T 19-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ALIDE2_RS04260 13d6d3d8c7fe5a39f27bdc55a1f39359 248 SUPERFAMILY SSF102705 2 247 4.05E-73 T 19-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ALIDE2_RS04260 13d6d3d8c7fe5a39f27bdc55a1f39359 248 PANTHER PTHR13799 1 244 1.1E-60 T 19-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ALIDE2_RS14155 67dcce162d9ac4273bda03f28c25683b 221 PANTHER PTHR30328:SF6 13 212 9.6E-13 T 19-04-2016 ALIDE2_RS14155 67dcce162d9ac4273bda03f28c25683b 221 PANTHER PTHR30328 13 212 9.6E-13 T 19-04-2016 ALIDE2_RS14155 67dcce162d9ac4273bda03f28c25683b 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 2.8E-7 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS14155 67dcce162d9ac4273bda03f28c25683b 221 Gene3D G3DSA:1.10.357.10 12 219 9.5E-31 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS14155 67dcce162d9ac4273bda03f28c25683b 221 Pfam PF13305 WHG domain 104 193 2.0E-17 T 19-04-2016 IPR025996 WHG domain ALIDE2_RS14155 67dcce162d9ac4273bda03f28c25683b 221 SUPERFAMILY SSF48498 96 216 7.71E-18 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS14155 67dcce162d9ac4273bda03f28c25683b 221 SUPERFAMILY SSF46689 11 83 1.39E-10 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS16540 11b6705317159c335d098bbcfa4f6824 207 Pfam PF14348 Domain of unknown function (DUF4400) 21 204 1.3E-32 T 19-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type ALIDE2_RS13340 6c58efba2a814bb679ff31e8cef41fc4 220 PIRSF PIRSF005461 1 220 1.6E-71 T 19-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 ALIDE2_RS13340 6c58efba2a814bb679ff31e8cef41fc4 220 PANTHER PTHR10920 1 220 2.7E-92 T 19-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 ALIDE2_RS13340 6c58efba2a814bb679ff31e8cef41fc4 220 Gene3D G3DSA:3.40.50.150 4 218 3.1E-70 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS13340 6c58efba2a814bb679ff31e8cef41fc4 220 SUPERFAMILY SSF53335 31 217 4.09E-38 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS13340 6c58efba2a814bb679ff31e8cef41fc4 220 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 12 216 31.686 T 19-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 ALIDE2_RS13340 6c58efba2a814bb679ff31e8cef41fc4 220 Pfam PF01728 FtsJ-like methyltransferase 32 214 1.3E-56 T 19-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 ALIDE2_RS07310 d093025bd1ceed631e088ecc08a7595f 436 Gene3D G3DSA:3.30.70.1050 1 118 8.7E-37 T 19-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 ALIDE2_RS07310 d093025bd1ceed631e088ecc08a7595f 436 TIGRFAM TIGR00115 tig: trigger factor 11 417 5.2E-134 T 19-04-2016 IPR005215 Trigger factor GO:0015031 ALIDE2_RS07310 d093025bd1ceed631e088ecc08a7595f 436 Gene3D G3DSA:3.10.50.40 153 212 1.3E-10 T 19-04-2016 ALIDE2_RS07310 d093025bd1ceed631e088ecc08a7595f 436 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 233 2.1E-15 T 19-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 ALIDE2_RS07310 d093025bd1ceed631e088ecc08a7595f 436 PANTHER PTHR30560 1 435 2.5E-109 T 19-04-2016 ALIDE2_RS07310 d093025bd1ceed631e088ecc08a7595f 436 Gene3D G3DSA:1.10.3120.10 213 393 2.5E-58 T 19-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 ALIDE2_RS07310 d093025bd1ceed631e088ecc08a7595f 436 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 1.4E-37 T 19-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 ALIDE2_RS07310 d093025bd1ceed631e088ecc08a7595f 436 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 417 2.2E-34 T 19-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 ALIDE2_RS07310 d093025bd1ceed631e088ecc08a7595f 436 Hamap MF_00303 Trigger factor [tig]. 1 423 20.823 T 19-04-2016 IPR005215 Trigger factor GO:0015031 ALIDE2_RS07310 d093025bd1ceed631e088ecc08a7595f 436 SUPERFAMILY SSF109998 250 434 9.71E-48 T 19-04-2016 IPR027304 Trigger factor/SurA domain ALIDE2_RS07310 d093025bd1ceed631e088ecc08a7595f 436 SUPERFAMILY SSF102735 1 130 7.19E-36 T 19-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 ALIDE2_RS07310 d093025bd1ceed631e088ecc08a7595f 436 PIRSF PIRSF003095 1 436 7.9E-124 T 19-04-2016 IPR005215 Trigger factor GO:0015031 ALIDE2_RS07310 d093025bd1ceed631e088ecc08a7595f 436 PANTHER PTHR30560:SF3 1 435 2.5E-109 T 19-04-2016 ALIDE2_RS07310 d093025bd1ceed631e088ecc08a7595f 436 SUPERFAMILY SSF54534 88 243 1.67E-33 T 19-04-2016 ALIDE2_RS05315 0d97e8e7143c723d39c12749053584c6 284 Gene3D G3DSA:3.20.20.60 3 283 1.6E-87 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS05315 0d97e8e7143c723d39c12749053584c6 284 PANTHER PTHR21631:SF4 3 272 3.5E-95 T 19-04-2016 ALIDE2_RS05315 0d97e8e7143c723d39c12749053584c6 284 PANTHER PTHR21631 3 272 3.5E-95 T 19-04-2016 ALIDE2_RS05315 0d97e8e7143c723d39c12749053584c6 284 SUPERFAMILY SSF51621 3 283 1.26E-90 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS05315 0d97e8e7143c723d39c12749053584c6 284 ProSitePatterns PS00161 Isocitrate lyase signature. 113 118 - T 19-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 ALIDE2_RS05315 0d97e8e7143c723d39c12749053584c6 284 Pfam PF13714 Phosphoenolpyruvate phosphomutase 7 243 9.4E-52 T 19-04-2016 ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 SUPERFAMILY SSF46977 455 601 2.09E-42 T 19-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 PIRSF PIRSF000171 3 591 2.4E-43 T 19-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 Pfam PF02910 Fumarate reductase flavoprotein C-term 465 600 2.0E-39 T 19-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 SUPERFAMILY SSF56425 241 359 2.09E-40 T 19-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 Pfam PF00890 FAD binding domain 14 408 3.5E-117 T 19-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 Gene3D G3DSA:1.20.58.100 450 568 1.2E-36 T 19-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 Gene3D G3DSA:3.90.700.10 248 354 6.7E-40 T 19-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 Gene3D G3DSA:3.50.50.60 5 247 5.7E-119 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 Gene3D G3DSA:3.50.50.60 355 428 5.7E-119 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 386 393 1.4E-5 T 19-04-2016 ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 1.4E-5 T 19-04-2016 ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 PANTHER PTHR11632 7 596 2.2E-304 T 19-04-2016 ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 11 601 2.2E-275 T 19-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 SUPERFAMILY SSF51905 363 431 3.59E-79 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 SUPERFAMILY SSF51905 9 264 3.59E-79 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 PANTHER PTHR11632:SF5 7 596 2.2E-304 T 19-04-2016 ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 Gene3D G3DSA:4.10.80.40 569 601 2.2E-23 T 19-04-2016 ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 14 600 3.3E-232 T 19-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 ALIDE2_RS11005 31c06e66697adec44272a9ed625f9f89 601 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 48 57 - T 19-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 ALIDE2_RS07040 2acda43ccaf029045d9cb654fcce5ad2 429 Gene3D G3DSA:3.30.930.10 3 184 1.2E-93 T 19-04-2016 ALIDE2_RS07040 2acda43ccaf029045d9cb654fcce5ad2 429 Gene3D G3DSA:3.30.930.10 220 320 1.2E-93 T 19-04-2016 ALIDE2_RS07040 2acda43ccaf029045d9cb654fcce5ad2 429 Gene3D G3DSA:3.40.50.800 327 422 1.5E-24 T 19-04-2016 IPR004154 Anticodon-binding ALIDE2_RS07040 2acda43ccaf029045d9cb654fcce5ad2 429 Pfam PF03129 Anticodon binding domain 338 422 6.0E-6 T 19-04-2016 IPR004154 Anticodon-binding ALIDE2_RS07040 2acda43ccaf029045d9cb654fcce5ad2 429 Pfam PF13393 Histidyl-tRNA synthetase 9 311 3.7E-51 T 19-04-2016 ALIDE2_RS07040 2acda43ccaf029045d9cb654fcce5ad2 429 SUPERFAMILY SSF55681 7 319 3.38E-100 T 19-04-2016 ALIDE2_RS07040 2acda43ccaf029045d9cb654fcce5ad2 429 PANTHER PTHR11476 1 429 9.4E-186 T 19-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 ALIDE2_RS07040 2acda43ccaf029045d9cb654fcce5ad2 429 PIRSF PIRSF001549 1 424 4.1E-111 T 19-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 ALIDE2_RS07040 2acda43ccaf029045d9cb654fcce5ad2 429 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 427 31.65 T 19-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 ALIDE2_RS07040 2acda43ccaf029045d9cb654fcce5ad2 429 SUPERFAMILY SSF52954 328 421 2.45E-13 T 19-04-2016 IPR004154 Anticodon-binding ALIDE2_RS07040 2acda43ccaf029045d9cb654fcce5ad2 429 PANTHER PTHR11476:SF9 1 429 9.4E-186 T 19-04-2016 ALIDE2_RS07040 2acda43ccaf029045d9cb654fcce5ad2 429 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 410 1.7E-146 T 19-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 ALIDE2_RS13060 bc33ede22b2d0291269c30ca9d0a61f5 1148 SUPERFAMILY SSF52518 27 206 4.18E-15 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS13060 bc33ede22b2d0291269c30ca9d0a61f5 1148 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 728 915 7.4E-26 T 19-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 ALIDE2_RS13060 bc33ede22b2d0291269c30ca9d0a61f5 1148 Gene3D G3DSA:3.40.920.10 719 919 2.8E-19 T 19-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 ALIDE2_RS13060 bc33ede22b2d0291269c30ca9d0a61f5 1148 PANTHER PTHR18968 368 756 5.3E-167 T 19-04-2016 ALIDE2_RS13060 bc33ede22b2d0291269c30ca9d0a61f5 1148 Gene3D G3DSA:3.40.50.970 430 643 1.9E-9 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS13060 bc33ede22b2d0291269c30ca9d0a61f5 1148 SUPERFAMILY SSF53323 719 959 3.92E-32 T 19-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 ALIDE2_RS13060 bc33ede22b2d0291269c30ca9d0a61f5 1148 PANTHER PTHR18968:SF134 368 756 5.3E-167 T 19-04-2016 ALIDE2_RS13060 bc33ede22b2d0291269c30ca9d0a61f5 1148 SUPERFAMILY SSF52518 429 612 1.31E-13 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS13060 bc33ede22b2d0291269c30ca9d0a61f5 1148 SUPERFAMILY SSF52922 280 397 6.8E-7 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ALIDE2_RS13060 bc33ede22b2d0291269c30ca9d0a61f5 1148 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 468 551 2.1E-5 T 19-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ALIDE2_RS08930 cfac6286dc4f8a25d4fd95f9d4d01ef7 568 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 71 77 - T 19-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ALIDE2_RS08930 cfac6286dc4f8a25d4fd95f9d4d01ef7 568 Pfam PF01555 DNA methylase 68 364 1.0E-52 T 19-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS08930 cfac6286dc4f8a25d4fd95f9d4d01ef7 568 SUPERFAMILY SSF53335 282 378 1.9E-77 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS08930 cfac6286dc4f8a25d4fd95f9d4d01ef7 568 SUPERFAMILY SSF53335 44 226 1.9E-77 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS08930 cfac6286dc4f8a25d4fd95f9d4d01ef7 568 PANTHER PTHR13370:SF7 45 254 1.5E-46 T 19-04-2016 ALIDE2_RS08930 cfac6286dc4f8a25d4fd95f9d4d01ef7 568 PANTHER PTHR13370:SF7 287 401 1.5E-46 T 19-04-2016 ALIDE2_RS08930 cfac6286dc4f8a25d4fd95f9d4d01ef7 568 Gene3D G3DSA:3.40.50.150 44 199 2.1E-74 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS08930 cfac6286dc4f8a25d4fd95f9d4d01ef7 568 Gene3D G3DSA:3.40.50.150 279 398 2.1E-74 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS08930 cfac6286dc4f8a25d4fd95f9d4d01ef7 568 PANTHER PTHR13370 45 254 1.5E-46 T 19-04-2016 ALIDE2_RS08930 cfac6286dc4f8a25d4fd95f9d4d01ef7 568 PANTHER PTHR13370 287 401 1.5E-46 T 19-04-2016 ALIDE2_RS08930 cfac6286dc4f8a25d4fd95f9d4d01ef7 568 PIRSF PIRSF015855 2 549 4.1E-122 T 19-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS08930 cfac6286dc4f8a25d4fd95f9d4d01ef7 568 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 102 121 2.7E-23 T 19-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS08930 cfac6286dc4f8a25d4fd95f9d4d01ef7 568 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 68 80 2.7E-23 T 19-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS08930 cfac6286dc4f8a25d4fd95f9d4d01ef7 568 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 332 346 2.7E-23 T 19-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS08930 cfac6286dc4f8a25d4fd95f9d4d01ef7 568 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 309 331 2.7E-23 T 19-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS21505 0d124b096811c32d829695ad1d3a0f51 534 SUPERFAMILY SSF56801 15 528 4.58E-120 T 19-04-2016 ALIDE2_RS21505 0d124b096811c32d829695ad1d3a0f51 534 PANTHER PTHR24096:SF136 30 525 2.2E-190 T 19-04-2016 ALIDE2_RS21505 0d124b096811c32d829695ad1d3a0f51 534 Gene3D G3DSA:3.30.300.30 420 525 4.7E-27 T 19-04-2016 ALIDE2_RS21505 0d124b096811c32d829695ad1d3a0f51 534 Gene3D G3DSA:2.30.38.10 347 418 2.1E-12 T 19-04-2016 ALIDE2_RS21505 0d124b096811c32d829695ad1d3a0f51 534 Gene3D G3DSA:3.40.50.980 178 335 8.4E-32 T 19-04-2016 ALIDE2_RS21505 0d124b096811c32d829695ad1d3a0f51 534 Pfam PF13193 AMP-binding enzyme C-terminal domain 435 518 3.9E-19 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS21505 0d124b096811c32d829695ad1d3a0f51 534 PANTHER PTHR24096 30 525 2.2E-190 T 19-04-2016 ALIDE2_RS21505 0d124b096811c32d829695ad1d3a0f51 534 Pfam PF00501 AMP-binding enzyme 34 425 2.0E-74 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS21505 0d124b096811c32d829695ad1d3a0f51 534 Gene3D G3DSA:3.40.50.980 16 177 3.6E-28 T 19-04-2016 ALIDE2_RS06965 a5f3acda7ba850d337912b854888c730 398 SUPERFAMILY SSF51395 18 209 8.55E-90 T 19-04-2016 ALIDE2_RS06965 a5f3acda7ba850d337912b854888c730 398 SUPERFAMILY SSF51395 242 394 8.55E-90 T 19-04-2016 ALIDE2_RS06965 a5f3acda7ba850d337912b854888c730 398 PIRSF PIRSF000138 1 398 5.9E-127 T 19-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 ALIDE2_RS06965 a5f3acda7ba850d337912b854888c730 398 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 291 297 - T 19-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 ALIDE2_RS06965 a5f3acda7ba850d337912b854888c730 398 PANTHER PTHR10578 16 398 1.3E-116 T 19-04-2016 ALIDE2_RS06965 a5f3acda7ba850d337912b854888c730 398 PANTHER PTHR10578:SF65 16 398 1.3E-116 T 19-04-2016 ALIDE2_RS06965 a5f3acda7ba850d337912b854888c730 398 Gene3D G3DSA:3.20.20.70 19 396 1.7E-122 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS06965 a5f3acda7ba850d337912b854888c730 398 Pfam PF01070 FMN-dependent dehydrogenase 29 394 4.3E-122 T 19-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 ALIDE2_RS13845 696a29a17dbec227d49a95a3f6d158f8 334 Pfam PF08273 Zinc-binding domain of primase-helicase 38 72 4.3E-6 T 19-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- ALIDE2_RS13845 696a29a17dbec227d49a95a3f6d158f8 334 Gene3D G3DSA:3.90.580.10 21 101 5.9E-7 T 19-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ALIDE2_RS13845 696a29a17dbec227d49a95a3f6d158f8 334 SUPERFAMILY SSF57783 17 103 1.19E-12 T 19-04-2016 ALIDE2_RS13845 696a29a17dbec227d49a95a3f6d158f8 334 SMART SM00778 37 74 3.9E-11 T 19-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- ALIDE2_RS13845 696a29a17dbec227d49a95a3f6d158f8 334 Pfam PF13362 Toprim domain 228 325 2.5E-12 T 19-04-2016 IPR006171 Toprim domain ALIDE2_RS01985 bc66ae63bb37b42c843f3895a9f50031 206 Gene3D G3DSA:1.10.10.60 1 44 2.7E-19 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS01985 bc66ae63bb37b42c843f3895a9f50031 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.6E-16 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS01985 bc66ae63bb37b42c843f3895a9f50031 206 SUPERFAMILY SSF46689 1 67 1.23E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS01985 bc66ae63bb37b42c843f3895a9f50031 206 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 202 5.5E-19 T 19-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 ALIDE2_RS01985 bc66ae63bb37b42c843f3895a9f50031 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 19-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ALIDE2_RS01985 bc66ae63bb37b42c843f3895a9f50031 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.6E-10 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS01985 bc66ae63bb37b42c843f3895a9f50031 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.6E-10 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS01985 bc66ae63bb37b42c843f3895a9f50031 206 Gene3D G3DSA:1.10.10.60 45 63 1.1E-8 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS01985 bc66ae63bb37b42c843f3895a9f50031 206 SUPERFAMILY SSF48498 85 203 1.78E-11 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS01985 bc66ae63bb37b42c843f3895a9f50031 206 PANTHER PTHR30055 1 203 1.4E-22 T 19-04-2016 ALIDE2_RS01985 bc66ae63bb37b42c843f3895a9f50031 206 Gene3D G3DSA:1.10.357.10 64 205 1.1E-18 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS16515 0520b4a1cf3eca20a9a1b6edc2d18c27 189 Pfam PF00717 Peptidase S24-like 96 160 5.3E-8 T 19-04-2016 IPR019759 Peptidase S24/S26A/S26B ALIDE2_RS16515 0520b4a1cf3eca20a9a1b6edc2d18c27 189 SUPERFAMILY SSF51306 91 182 3.14E-13 T 19-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C ALIDE2_RS16515 0520b4a1cf3eca20a9a1b6edc2d18c27 189 Gene3D G3DSA:2.10.109.10 94 182 7.1E-12 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS13735 390fd159f98f691af007a6eac91adcfe 109 SUPERFAMILY SSF81273 72 108 3.1E-7 T 19-04-2016 ALIDE2_RS13735 390fd159f98f691af007a6eac91adcfe 109 SMART SM00528 63 108 7.3E-6 T 19-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ALIDE2_RS13735 390fd159f98f691af007a6eac91adcfe 109 Gene3D G3DSA:4.10.430.10 70 108 8.7E-9 T 19-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ALIDE2_RS13735 390fd159f98f691af007a6eac91adcfe 109 Pfam PF00816 H-NS histone family 9 102 4.7E-20 T 19-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 Hamap MF_01201 Alanine racemase. 2 364 31.954 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 SUPERFAMILY SSF50621 228 360 1.92E-44 T 19-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 TIGRFAM TIGR00492 alr: alanine racemase 5 361 1.0E-100 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 19-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 Pfam PF01168 Alanine racemase, N-terminal domain 9 220 1.2E-64 T 19-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 PANTHER PTHR30511:SF0 1 360 7.9E-118 T 19-04-2016 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 PRINTS PR00992 Alanine racemase signature 61 79 5.5E-59 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 PRINTS PR00992 Alanine racemase signature 289 306 5.5E-59 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 PRINTS PR00992 Alanine racemase signature 251 266 5.5E-59 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 PRINTS PR00992 Alanine racemase signature 346 359 5.5E-59 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 PRINTS PR00992 Alanine racemase signature 121 133 5.5E-59 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 PRINTS PR00992 Alanine racemase signature 27 43 5.5E-59 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 PRINTS PR00992 Alanine racemase signature 193 220 5.5E-59 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 PRINTS PR00992 Alanine racemase signature 155 166 5.5E-59 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 PRINTS PR00992 Alanine racemase signature 268 283 5.5E-59 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 Gene3D G3DSA:3.20.20.10 13 210 7.3E-61 T 19-04-2016 IPR029066 PLP-binding barrel ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 Gene3D G3DSA:2.40.37.10 211 360 7.3E-53 T 19-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 SUPERFAMILY SSF51419 9 236 6.11E-59 T 19-04-2016 IPR029066 PLP-binding barrel ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 Pfam PF00842 Alanine racemase, C-terminal domain 235 361 4.1E-38 T 19-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 SMART SM01005 235 364 1.3E-60 T 19-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS01170 b6560c7a3c9b9d8ac9f5c58bb343ac0b 364 PANTHER PTHR30511 1 360 7.9E-118 T 19-04-2016 ALIDE2_RS05940 33dbe551e5d3495bd498f49cb1253f7a 379 PANTHER PTHR18895 205 335 6.4E-20 T 19-04-2016 ALIDE2_RS05940 33dbe551e5d3495bd498f49cb1253f7a 379 Pfam PF05175 Methyltransferase small domain 202 316 6.1E-10 T 19-04-2016 IPR007848 Methyltransferase small domain GO:0008168 ALIDE2_RS05940 33dbe551e5d3495bd498f49cb1253f7a 379 SUPERFAMILY SSF53335 160 316 1.23E-29 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS05940 33dbe551e5d3495bd498f49cb1253f7a 379 Gene3D G3DSA:3.40.50.150 172 341 2.5E-31 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS12740 b5b0bb6e79d81102c719147a8f4cae38 259 PANTHER PTHR11941:SF28 2 256 2.0E-113 T 19-04-2016 ALIDE2_RS12740 b5b0bb6e79d81102c719147a8f4cae38 259 SUPERFAMILY SSF52096 4 258 4.36E-77 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS12740 b5b0bb6e79d81102c719147a8f4cae38 259 PANTHER PTHR11941 2 256 2.0E-113 T 19-04-2016 ALIDE2_RS12740 b5b0bb6e79d81102c719147a8f4cae38 259 Gene3D G3DSA:3.90.226.10 5 257 5.5E-73 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS12740 b5b0bb6e79d81102c719147a8f4cae38 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 258 2.5E-52 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS17135 46b08ce2ed7282f1f338c92f1b058318 258 Gene3D G3DSA:3.30.1330.30 9 98 2.5E-9 T 19-04-2016 IPR029064 50S ribosomal protein L30e-like ALIDE2_RS17135 46b08ce2ed7282f1f338c92f1b058318 258 SUPERFAMILY SSF55315 8 97 1.74E-10 T 19-04-2016 IPR029064 50S ribosomal protein L30e-like ALIDE2_RS17135 46b08ce2ed7282f1f338c92f1b058318 258 SUPERFAMILY SSF75217 108 253 3.34E-31 T 19-04-2016 IPR029028 Alpha/beta knot methyltransferases ALIDE2_RS17135 46b08ce2ed7282f1f338c92f1b058318 258 Gene3D G3DSA:3.40.1280.10 114 253 2.1E-35 T 19-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ALIDE2_RS17135 46b08ce2ed7282f1f338c92f1b058318 258 PANTHER PTHR12029 8 251 2.6E-36 T 19-04-2016 ALIDE2_RS17135 46b08ce2ed7282f1f338c92f1b058318 258 Pfam PF00588 SpoU rRNA Methylase family 116 251 6.2E-26 T 19-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ALIDE2_RS17385 07a2e4e183874d69f6c3388847b00693 336 Gene3D G3DSA:3.20.20.210 2 329 3.2E-39 T 19-04-2016 ALIDE2_RS17385 07a2e4e183874d69f6c3388847b00693 336 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 7 328 5.3E-29 T 19-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 ALIDE2_RS17385 07a2e4e183874d69f6c3388847b00693 336 SUPERFAMILY SSF51726 3 330 2.35E-45 T 19-04-2016 ALIDE2_RS00480 2a3c4f3058b1fe260f63e1a1d1e3dbd0 325 PIRSF PIRSF017082 2 325 4.7E-83 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00480 2a3c4f3058b1fe260f63e1a1d1e3dbd0 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 321 5.3E-84 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00480 2a3c4f3058b1fe260f63e1a1d1e3dbd0 325 PANTHER PTHR30349 4 325 3.6E-85 T 19-04-2016 ALIDE2_RS00480 2a3c4f3058b1fe260f63e1a1d1e3dbd0 325 Gene3D G3DSA:3.40.190.10 139 217 8.0E-4 T 19-04-2016 ALIDE2_RS00480 2a3c4f3058b1fe260f63e1a1d1e3dbd0 325 SUPERFAMILY SSF53850 114 279 2.06E-13 T 19-04-2016 ALIDE2_RS00480 2a3c4f3058b1fe260f63e1a1d1e3dbd0 325 PANTHER PTHR30349:SF16 4 325 3.6E-85 T 19-04-2016 ALIDE2_RS09155 299579f9c71eb580950d80fb3096cac6 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 119 1.4E-26 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS09155 299579f9c71eb580950d80fb3096cac6 388 Gene3D G3DSA:1.20.140.10 223 387 5.0E-55 T 19-04-2016 ALIDE2_RS09155 299579f9c71eb580950d80fb3096cac6 388 Gene3D G3DSA:1.10.540.10 1 119 2.7E-34 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS09155 299579f9c71eb580950d80fb3096cac6 388 SUPERFAMILY SSF47203 231 386 2.42E-46 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS09155 299579f9c71eb580950d80fb3096cac6 388 Gene3D G3DSA:2.40.110.10 122 222 5.9E-30 T 19-04-2016 ALIDE2_RS09155 299579f9c71eb580950d80fb3096cac6 388 SUPERFAMILY SSF56645 1 232 9.82E-65 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS09155 299579f9c71eb580950d80fb3096cac6 388 PANTHER PTHR10909:SF241 1 388 7.4E-221 T 19-04-2016 ALIDE2_RS09155 299579f9c71eb580950d80fb3096cac6 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 366 4.1E-36 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS09155 299579f9c71eb580950d80fb3096cac6 388 PANTHER PTHR10909 1 388 7.4E-221 T 19-04-2016 ALIDE2_RS09155 299579f9c71eb580950d80fb3096cac6 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 219 1.4E-19 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS15555 ed9f6c3d38723d1e7f151813e22d4c41 132 Gene3D G3DSA:1.10.3830.10 12 129 1.2E-41 T 19-04-2016 ALIDE2_RS15555 ed9f6c3d38723d1e7f151813e22d4c41 132 PANTHER PTHR34299 6 130 6.7E-34 T 19-04-2016 ALIDE2_RS15555 ed9f6c3d38723d1e7f151813e22d4c41 132 PANTHER PTHR34299:SF1 6 130 6.7E-34 T 19-04-2016 ALIDE2_RS15555 ed9f6c3d38723d1e7f151813e22d4c41 132 Pfam PF01219 Prokaryotic diacylglycerol kinase 25 124 2.3E-31 T 19-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 ALIDE2_RS20040 49c41b7959904f7d75d2e03a313f88d0 299 PANTHER PTHR30349 6 298 3.5E-100 T 19-04-2016 ALIDE2_RS20040 49c41b7959904f7d75d2e03a313f88d0 299 SUPERFAMILY SSF56349 110 297 2.09E-54 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS20040 49c41b7959904f7d75d2e03a313f88d0 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 11 298 4.5E-109 T 19-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 ALIDE2_RS20040 49c41b7959904f7d75d2e03a313f88d0 299 PANTHER PTHR30349:SF5 6 298 3.5E-100 T 19-04-2016 ALIDE2_RS20040 49c41b7959904f7d75d2e03a313f88d0 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 299 58.123 T 19-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 ALIDE2_RS20040 49c41b7959904f7d75d2e03a313f88d0 299 SUPERFAMILY SSF47823 5 102 2.75E-29 T 19-04-2016 IPR010998 Integrase, Lambda-type, N-terminal ALIDE2_RS20040 49c41b7959904f7d75d2e03a313f88d0 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 7.1E-19 T 19-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ALIDE2_RS20040 49c41b7959904f7d75d2e03a313f88d0 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 299 29.616 T 19-04-2016 IPR023009 Tyrosine recombinase XerC/XerD ALIDE2_RS20040 49c41b7959904f7d75d2e03a313f88d0 299 Gene3D G3DSA:1.10.150.130 6 101 2.9E-24 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS20040 49c41b7959904f7d75d2e03a313f88d0 299 Gene3D G3DSA:1.10.443.10 114 290 1.0E-55 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS20040 49c41b7959904f7d75d2e03a313f88d0 299 Pfam PF00589 Phage integrase family 113 284 8.7E-49 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS01585 bc04b34fa501c7f136f608835c3d79e9 99 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 94 1.4E-14 T 19-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ALIDE2_RS01585 bc04b34fa501c7f136f608835c3d79e9 99 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 99 19.86 T 19-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ALIDE2_RS01585 bc04b34fa501c7f136f608835c3d79e9 99 PANTHER PTHR15004 1 99 7.3E-23 T 19-04-2016 ALIDE2_RS01585 bc04b34fa501c7f136f608835c3d79e9 99 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 5 99 1.2E-23 T 19-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ALIDE2_RS01585 bc04b34fa501c7f136f608835c3d79e9 99 SUPERFAMILY SSF141000 3 97 1.02E-22 T 19-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ALIDE2_RS08660 2f88cfedf45e2d1c8591dce036d4ce26 399 Gene3D G3DSA:2.40.128.140 129 396 2.7E-102 T 19-04-2016 ALIDE2_RS08660 2f88cfedf45e2d1c8591dce036d4ce26 399 Gene3D G3DSA:2.40.128.140 63 93 2.7E-102 T 19-04-2016 ALIDE2_RS08660 2f88cfedf45e2d1c8591dce036d4ce26 399 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 66 397 1.0E-89 T 19-04-2016 IPR018707 Protein of unknown function DUF2219 ALIDE2_RS01625 17c80b205a8b5e6869c2ebaa3b93e422 372 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 130 367 5.7E-65 T 19-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria ALIDE2_RS01625 17c80b205a8b5e6869c2ebaa3b93e422 372 PANTHER PTHR30188:SF3 108 372 3.2E-77 T 19-04-2016 ALIDE2_RS01625 17c80b205a8b5e6869c2ebaa3b93e422 372 PANTHER PTHR30188 108 372 3.2E-77 T 19-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 ALIDE2_RS01625 17c80b205a8b5e6869c2ebaa3b93e422 372 Pfam PF02405 Permease MlaE 158 365 3.0E-65 T 19-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 ALIDE2_RS12360 318ba43520c0805a05c5b7bff50d41af 478 SUPERFAMILY SSF47413 2 61 4.29E-15 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS12360 318ba43520c0805a05c5b7bff50d41af 478 Gene3D G3DSA:1.10.260.40 2 66 8.6E-19 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS12360 318ba43520c0805a05c5b7bff50d41af 478 Pfam PF06114 Domain of unknown function (DUF955) 195 317 2.3E-15 T 19-04-2016 IPR010359 HTH domain, IrrE-type ALIDE2_RS12360 318ba43520c0805a05c5b7bff50d41af 478 SMART SM00530 4 59 1.4E-14 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS12360 318ba43520c0805a05c5b7bff50d41af 478 PIRSF PIRSF019251 1 477 1.2E-164 T 19-04-2016 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 ALIDE2_RS12360 318ba43520c0805a05c5b7bff50d41af 478 Pfam PF01381 Helix-turn-helix 5 58 1.2E-14 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS12360 318ba43520c0805a05c5b7bff50d41af 478 PANTHER PTHR10245 1 59 3.0E-14 T 19-04-2016 ALIDE2_RS12360 318ba43520c0805a05c5b7bff50d41af 478 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 319 474 5.4E-64 T 19-04-2016 IPR018653 Domain of unknown function DUF2083,transcriptional regulator ALIDE2_RS15875 5a3e007879da619a270ce1c80853d51a 193 SUPERFAMILY SSF143744 54 188 2.88E-33 T 19-04-2016 ALIDE2_RS15875 5a3e007879da619a270ce1c80853d51a 193 PANTHER PTHR34309 23 193 4.4E-29 T 19-04-2016 ALIDE2_RS15875 5a3e007879da619a270ce1c80853d51a 193 Pfam PF03928 Haem-degrading 61 185 2.6E-26 T 19-04-2016 IPR005624 Haem-degrading ALIDE2_RS15875 5a3e007879da619a270ce1c80853d51a 193 PANTHER PTHR34309:SF1 23 193 4.4E-29 T 19-04-2016 ALIDE2_RS23505 200b7509e3670a652555fed6c3ad907f 332 PANTHER PTHR10188:SF24 13 332 3.5E-122 T 19-04-2016 ALIDE2_RS23505 200b7509e3670a652555fed6c3ad907f 332 PANTHER PTHR10188 13 332 3.5E-122 T 19-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 ALIDE2_RS23505 200b7509e3670a652555fed6c3ad907f 332 Pfam PF01112 Asparaginase 13 331 8.6E-111 T 19-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 ALIDE2_RS23505 200b7509e3670a652555fed6c3ad907f 332 SUPERFAMILY SSF56235 196 329 5.66E-91 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS23505 200b7509e3670a652555fed6c3ad907f 332 SUPERFAMILY SSF56235 12 164 5.66E-91 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS13250 0241b20122ce21f5503e6a685d088bec 84 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 1.4E-19 T 19-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS13250 0241b20122ce21f5503e6a685d088bec 84 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 70 - T 19-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS13250 0241b20122ce21f5503e6a685d088bec 84 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-7 T 19-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS13250 0241b20122ce21f5503e6a685d088bec 84 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.4E-7 T 19-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS13250 0241b20122ce21f5503e6a685d088bec 84 PANTHER PTHR33280:SF2 1 79 1.0E-25 T 19-04-2016 ALIDE2_RS13250 0241b20122ce21f5503e6a685d088bec 84 SUPERFAMILY SSF143800 1 80 1.14E-20 T 19-04-2016 ALIDE2_RS13250 0241b20122ce21f5503e6a685d088bec 84 Pfam PF01197 Ribosomal protein L31 1 79 1.7E-27 T 19-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS13250 0241b20122ce21f5503e6a685d088bec 84 PANTHER PTHR33280 1 79 1.0E-25 T 19-04-2016 ALIDE2_RS09415 1e6f7830dded3eb72c0b7c8f8cfe4cc9 363 PANTHER PTHR10361:SF31 14 354 3.2E-116 T 19-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 ALIDE2_RS09415 1e6f7830dded3eb72c0b7c8f8cfe4cc9 363 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 16 343 8.8E-116 T 19-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 ALIDE2_RS09415 1e6f7830dded3eb72c0b7c8f8cfe4cc9 363 PANTHER PTHR10361 14 354 3.2E-116 T 19-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ALIDE2_RS09415 1e6f7830dded3eb72c0b7c8f8cfe4cc9 363 PIRSF PIRSF005508 2 360 1.7E-115 T 19-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 ALIDE2_RS09415 1e6f7830dded3eb72c0b7c8f8cfe4cc9 363 Pfam PF01758 Sodium Bile acid symporter family 62 256 5.2E-36 T 19-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 Gene3D G3DSA:3.40.50.720 8 256 3.4E-62 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 5.6E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 5.6E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 5.6E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 PANTHER PTHR24322:SF356 11 150 3.4E-48 T 19-04-2016 ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 PANTHER PTHR24322:SF356 166 202 3.4E-48 T 19-04-2016 ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.4E-29 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-29 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.4E-29 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.4E-29 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.4E-29 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.4E-29 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 1.2E-42 T 19-04-2016 ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 SUPERFAMILY SSF51735 8 256 4.34E-56 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 PANTHER PTHR24322 11 150 3.4E-48 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS08375 abe5bc15785a4876336540fa5ca08f30 260 PANTHER PTHR24322 166 202 3.4E-48 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS12960 e10233b5a767604de59a3ac485a3a003 257 Pfam PF00005 ABC transporter 23 177 9.2E-19 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS12960 e10233b5a767604de59a3ac485a3a003 257 PANTHER PTHR24220:SF85 9 247 2.9E-82 T 19-04-2016 ALIDE2_RS12960 e10233b5a767604de59a3ac485a3a003 257 Gene3D G3DSA:3.40.50.300 5 237 4.1E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12960 e10233b5a767604de59a3ac485a3a003 257 SUPERFAMILY SSF52540 6 237 3.07E-42 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12960 e10233b5a767604de59a3ac485a3a003 257 SMART SM00382 32 229 3.5E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS12960 e10233b5a767604de59a3ac485a3a003 257 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS12960 e10233b5a767604de59a3ac485a3a003 257 PANTHER PTHR24220 9 247 2.9E-82 T 19-04-2016 ALIDE2_RS12960 e10233b5a767604de59a3ac485a3a003 257 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 8 249 2.1E-91 T 19-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 ALIDE2_RS00965 19cc9fc5d3201af2d621f308ff25a058 903 TIGRFAM TIGR02082 metH: methionine synthase 2 872 0.0 T 19-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 ALIDE2_RS00965 19cc9fc5d3201af2d621f308ff25a058 903 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 612 888 2.0E-120 T 19-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 ALIDE2_RS00965 19cc9fc5d3201af2d621f308ff25a058 903 Gene3D G3DSA:3.10.196.10 632 903 5.7E-107 T 19-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 ALIDE2_RS00965 19cc9fc5d3201af2d621f308ff25a058 903 Pfam PF02310 B12 binding domain 423 515 1.4E-17 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 ALIDE2_RS00965 19cc9fc5d3201af2d621f308ff25a058 903 Pfam PF02607 B12 binding domain 324 400 5.2E-25 T 19-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain ALIDE2_RS00965 19cc9fc5d3201af2d621f308ff25a058 903 SMART SM01018 320 408 3.6E-42 T 19-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain ALIDE2_RS00965 19cc9fc5d3201af2d621f308ff25a058 903 SUPERFAMILY SSF47644 321 407 1.7E-25 T 19-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain ALIDE2_RS00965 19cc9fc5d3201af2d621f308ff25a058 903 Gene3D G3DSA:3.20.20.20 17 297 5.7E-117 T 19-04-2016 IPR000489 Pterin-binding domain GO:0042558 ALIDE2_RS00965 19cc9fc5d3201af2d621f308ff25a058 903 SUPERFAMILY SSF56507 580 902 7.19E-122 T 19-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 ALIDE2_RS00965 19cc9fc5d3201af2d621f308ff25a058 903 Gene3D G3DSA:1.10.1240.10 320 405 1.6E-34 T 19-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain ALIDE2_RS00965 19cc9fc5d3201af2d621f308ff25a058 903 Pfam PF00809 Pterin binding enzyme 21 259 2.6E-61 T 19-04-2016 IPR000489 Pterin-binding domain GO:0042558 ALIDE2_RS00965 19cc9fc5d3201af2d621f308ff25a058 903 SUPERFAMILY SSF51717 17 291 1.83E-93 T 19-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 ALIDE2_RS00965 19cc9fc5d3201af2d621f308ff25a058 903 PIRSF PIRSF000381 1 875 0.0 T 19-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 ALIDE2_RS00965 19cc9fc5d3201af2d621f308ff25a058 903 SUPERFAMILY SSF52242 418 569 3.27E-40 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 ALIDE2_RS00965 19cc9fc5d3201af2d621f308ff25a058 903 Gene3D G3DSA:3.40.50.280 419 572 1.4E-60 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 ALIDE2_RS02960 1f2086470c84dc2eee0b678df96c4df5 435 Pfam PF00364 Biotin-requiring enzyme 6 77 8.0E-17 T 19-04-2016 IPR000089 Biotin/lipoyl attachment ALIDE2_RS02960 1f2086470c84dc2eee0b678df96c4df5 435 SUPERFAMILY SSF52777 201 433 2.0E-77 T 19-04-2016 ALIDE2_RS02960 1f2086470c84dc2eee0b678df96c4df5 435 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 19-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ALIDE2_RS02960 1f2086470c84dc2eee0b678df96c4df5 435 PANTHER PTHR23151:SF62 1 435 2.4E-197 T 19-04-2016 ALIDE2_RS02960 1f2086470c84dc2eee0b678df96c4df5 435 Gene3D G3DSA:4.10.320.10 144 194 1.3E-15 T 19-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 ALIDE2_RS02960 1f2086470c84dc2eee0b678df96c4df5 435 Pfam PF02817 e3 binding domain 148 182 8.5E-11 T 19-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 ALIDE2_RS02960 1f2086470c84dc2eee0b678df96c4df5 435 SUPERFAMILY SSF51230 2 95 6.28E-24 T 19-04-2016 IPR011053 Single hybrid motif ALIDE2_RS02960 1f2086470c84dc2eee0b678df96c4df5 435 Gene3D G3DSA:2.40.50.100 3 94 8.8E-22 T 19-04-2016 ALIDE2_RS02960 1f2086470c84dc2eee0b678df96c4df5 435 Gene3D G3DSA:3.30.559.10 201 433 2.8E-81 T 19-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain ALIDE2_RS02960 1f2086470c84dc2eee0b678df96c4df5 435 SUPERFAMILY SSF47005 142 187 2.35E-10 T 19-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 ALIDE2_RS02960 1f2086470c84dc2eee0b678df96c4df5 435 PANTHER PTHR23151 1 435 2.4E-197 T 19-04-2016 ALIDE2_RS02960 1f2086470c84dc2eee0b678df96c4df5 435 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 205 433 3.0E-79 T 19-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 ALIDE2_RS04520 2a26dfe8372a47f9b769148449abce28 810 Gene3D G3DSA:3.30.70.100 712 783 3.1E-8 T 19-04-2016 ALIDE2_RS04520 2a26dfe8372a47f9b769148449abce28 810 Pfam PF12607 Protein of unknown function (DUF3772) 144 205 1.5E-17 T 19-04-2016 IPR022249 Domain of unknown function DUF3772 ALIDE2_RS04520 2a26dfe8372a47f9b769148449abce28 810 Gene3D G3DSA:2.30.30.60 645 694 1.7E-15 T 19-04-2016 ALIDE2_RS04520 2a26dfe8372a47f9b769148449abce28 810 PANTHER PTHR30347 125 800 1.7E-119 T 19-04-2016 ALIDE2_RS04520 2a26dfe8372a47f9b769148449abce28 810 SUPERFAMILY SSF50182 630 695 2.19E-15 T 19-04-2016 IPR010920 LSM domain ALIDE2_RS04520 2a26dfe8372a47f9b769148449abce28 810 PANTHER PTHR30347:SF3 125 800 1.7E-119 T 19-04-2016 ALIDE2_RS04520 2a26dfe8372a47f9b769148449abce28 810 Pfam PF00924 Mechanosensitive ion channel 589 785 2.1E-40 T 19-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ALIDE2_RS04520 2a26dfe8372a47f9b769148449abce28 810 SUPERFAMILY SSF82689 701 792 5.23E-12 T 19-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ALIDE2_RS04520 2a26dfe8372a47f9b769148449abce28 810 SUPERFAMILY SSF82861 546 628 5.23E-10 T 19-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 ALIDE2_RS03295 dd61ae1315f121ebf9b3e3dce993141f 598 PANTHER PTHR24362 17 60 7.0E-41 T 19-04-2016 ALIDE2_RS03295 dd61ae1315f121ebf9b3e3dce993141f 598 PANTHER PTHR24362 80 485 7.0E-41 T 19-04-2016 ALIDE2_RS03295 dd61ae1315f121ebf9b3e3dce993141f 598 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 28 51 - T 19-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 ALIDE2_RS03295 dd61ae1315f121ebf9b3e3dce993141f 598 SUPERFAMILY SSF56112 18 301 1.48E-45 T 19-04-2016 IPR011009 Protein kinase-like domain ALIDE2_RS03295 dd61ae1315f121ebf9b3e3dce993141f 598 PANTHER PTHR24362:SF160 17 60 7.0E-41 T 19-04-2016 ALIDE2_RS03295 dd61ae1315f121ebf9b3e3dce993141f 598 PANTHER PTHR24362:SF160 80 485 7.0E-41 T 19-04-2016 ALIDE2_RS03295 dd61ae1315f121ebf9b3e3dce993141f 598 Gene3D G3DSA:3.30.200.20 16 104 1.5E-15 T 19-04-2016 ALIDE2_RS03295 dd61ae1315f121ebf9b3e3dce993141f 598 Pfam PF00069 Protein kinase domain 23 293 5.5E-27 T 19-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ALIDE2_RS03295 dd61ae1315f121ebf9b3e3dce993141f 598 Gene3D G3DSA:1.10.510.10 105 296 1.0E-25 T 19-04-2016 ALIDE2_RS03315 590e793da73bf217f474f2630d34c1d4 374 SUPERFAMILY SSF53067 68 113 5.96E-24 T 19-04-2016 ALIDE2_RS03315 590e793da73bf217f474f2630d34c1d4 374 SUPERFAMILY SSF53067 147 346 5.96E-24 T 19-04-2016 ALIDE2_RS03315 590e793da73bf217f474f2630d34c1d4 374 SUPERFAMILY SSF53067 9 41 5.96E-24 T 19-04-2016 ALIDE2_RS03315 590e793da73bf217f474f2630d34c1d4 374 PANTHER PTHR30605:SF0 1 373 2.0E-140 T 19-04-2016 ALIDE2_RS03315 590e793da73bf217f474f2630d34c1d4 374 Gene3D G3DSA:3.30.420.40 149 332 1.6E-66 T 19-04-2016 ALIDE2_RS03315 590e793da73bf217f474f2630d34c1d4 374 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 6 374 40.083 T 19-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 ALIDE2_RS03315 590e793da73bf217f474f2630d34c1d4 374 PANTHER PTHR30605 1 373 2.0E-140 T 19-04-2016 ALIDE2_RS03315 590e793da73bf217f474f2630d34c1d4 374 Pfam PF03702 Uncharacterised protein family (UPF0075) 7 374 3.6E-134 T 19-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 ALIDE2_RS22520 2cb763b60111a99268e79109eb700257 183 SMART SM00317 16 134 5.1E-31 T 19-04-2016 IPR001214 SET domain GO:0005515 ALIDE2_RS22520 2cb763b60111a99268e79109eb700257 183 Pfam PF00856 SET domain 27 128 2.0E-18 T 19-04-2016 IPR001214 SET domain GO:0005515 ALIDE2_RS22520 2cb763b60111a99268e79109eb700257 183 Gene3D G3DSA:2.170.270.10 17 156 8.2E-46 T 19-04-2016 ALIDE2_RS22520 2cb763b60111a99268e79109eb700257 183 PANTHER PTHR22884:SF336 16 147 2.2E-35 T 19-04-2016 ALIDE2_RS22520 2cb763b60111a99268e79109eb700257 183 PANTHER PTHR22884 16 147 2.2E-35 T 19-04-2016 ALIDE2_RS22520 2cb763b60111a99268e79109eb700257 183 SUPERFAMILY SSF82199 17 154 4.19E-47 T 19-04-2016 ALIDE2_RS15595 1d541042860fc8e6b0315ced1ee70a09 693 PANTHER PTHR31998:SF0 11 689 0.0 T 19-04-2016 ALIDE2_RS15595 1d541042860fc8e6b0315ced1ee70a09 693 PIRSF PIRSF001265 4 693 3.7E-270 T 19-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 ALIDE2_RS15595 1d541042860fc8e6b0315ced1ee70a09 693 Pfam PF03030 Inorganic H+ pyrophosphatase 19 683 3.1E-270 T 19-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 ALIDE2_RS15595 1d541042860fc8e6b0315ced1ee70a09 693 PANTHER PTHR31998 11 689 0.0 T 19-04-2016 ALIDE2_RS15595 1d541042860fc8e6b0315ced1ee70a09 693 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 8 688 25.739 T 19-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 ALIDE2_RS15595 1d541042860fc8e6b0315ced1ee70a09 693 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 12 689 1.2E-264 T 19-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 ALIDE2_RS09420 44d4823218b1b30d6b77b87b116f4f1c 165 SUPERFAMILY SSF52788 7 145 1.05E-36 T 19-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily ALIDE2_RS09420 44d4823218b1b30d6b77b87b116f4f1c 165 Gene3D G3DSA:3.40.50.270 5 143 1.3E-36 T 19-04-2016 ALIDE2_RS09420 44d4823218b1b30d6b77b87b116f4f1c 165 PANTHER PTHR11717:SF18 10 162 3.5E-30 T 19-04-2016 ALIDE2_RS09420 44d4823218b1b30d6b77b87b116f4f1c 165 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 10 137 3.9E-14 T 19-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily ALIDE2_RS09420 44d4823218b1b30d6b77b87b116f4f1c 165 PANTHER PTHR11717 10 162 3.5E-30 T 19-04-2016 ALIDE2_RS09420 44d4823218b1b30d6b77b87b116f4f1c 165 SMART SM00226 7 145 4.5E-29 T 19-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily ALIDE2_RS19320 0d7aee950d2db79e01ca98ee898ced02 116 Gene3D G3DSA:3.40.30.10 1 116 5.8E-47 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS19320 0d7aee950d2db79e01ca98ee898ced02 116 PANTHER PTHR30041 1 116 1.2E-35 T 19-04-2016 ALIDE2_RS19320 0d7aee950d2db79e01ca98ee898ced02 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 5.3E-43 T 19-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 ALIDE2_RS19320 0d7aee950d2db79e01ca98ee898ced02 116 Pfam PF03960 ArsC family 7 112 8.6E-16 T 19-04-2016 IPR006660 Arsenate reductase-like ALIDE2_RS19320 0d7aee950d2db79e01ca98ee898ced02 116 PANTHER PTHR30041:SF4 1 116 1.2E-35 T 19-04-2016 ALIDE2_RS19320 0d7aee950d2db79e01ca98ee898ced02 116 SUPERFAMILY SSF52833 3 116 1.07E-33 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS18265 ff9bb43e8c779aa0365e3e938a33adba 128 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 115 1.4E-49 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18265 ff9bb43e8c779aa0365e3e938a33adba 128 ProSitePatterns PS01015 Ribosomal protein L19 signature. 88 103 - T 19-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18265 ff9bb43e8c779aa0365e3e938a33adba 128 Pfam PF01245 Ribosomal protein L19 3 115 3.7E-47 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18265 ff9bb43e8c779aa0365e3e938a33adba 128 PANTHER PTHR15680 2 116 7.9E-53 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18265 ff9bb43e8c779aa0365e3e938a33adba 128 PIRSF PIRSF002191 1 128 1.3E-50 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18265 ff9bb43e8c779aa0365e3e938a33adba 128 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 116 30.664 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18265 ff9bb43e8c779aa0365e3e938a33adba 128 PRINTS PR00061 Ribosomal protein L19 signature 36 65 5.1E-37 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18265 ff9bb43e8c779aa0365e3e938a33adba 128 PRINTS PR00061 Ribosomal protein L19 signature 90 115 5.1E-37 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18265 ff9bb43e8c779aa0365e3e938a33adba 128 PRINTS PR00061 Ribosomal protein L19 signature 6 35 5.1E-37 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS18265 ff9bb43e8c779aa0365e3e938a33adba 128 SUPERFAMILY SSF50104 1 117 4.71E-45 T 19-04-2016 IPR008991 Translation protein SH3-like domain ALIDE2_RS03005 d3560b16267ca3a21c4cbce78dd0610b 258 Gene3D G3DSA:3.30.420.40 91 251 1.9E-38 T 19-04-2016 ALIDE2_RS03005 d3560b16267ca3a21c4cbce78dd0610b 258 SUPERFAMILY SSF53067 125 250 1.48E-27 T 19-04-2016 ALIDE2_RS03005 d3560b16267ca3a21c4cbce78dd0610b 258 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 253 16.552 T 19-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 ALIDE2_RS03005 d3560b16267ca3a21c4cbce78dd0610b 258 SUPERFAMILY SSF53067 3 116 8.74E-27 T 19-04-2016 ALIDE2_RS03005 d3560b16267ca3a21c4cbce78dd0610b 258 PANTHER PTHR34265 1 251 1.4E-28 T 19-04-2016 ALIDE2_RS03005 d3560b16267ca3a21c4cbce78dd0610b 258 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 246 2.8E-21 T 19-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 ALIDE2_RS03005 d3560b16267ca3a21c4cbce78dd0610b 258 Pfam PF03309 Type III pantothenate kinase 3 204 1.2E-53 T 19-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 ALIDE2_RS15910 e05b66cdced17c72fe69f6e37770b596 319 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 315 6.5E-81 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS15910 e05b66cdced17c72fe69f6e37770b596 319 PANTHER PTHR30349 3 282 5.5E-80 T 19-04-2016 ALIDE2_RS15910 e05b66cdced17c72fe69f6e37770b596 319 SUPERFAMILY SSF53850 98 281 5.09E-18 T 19-04-2016 ALIDE2_RS15910 e05b66cdced17c72fe69f6e37770b596 319 Gene3D G3DSA:3.40.190.10 125 224 1.0E-6 T 19-04-2016 ALIDE2_RS15910 e05b66cdced17c72fe69f6e37770b596 319 PIRSF PIRSF017082 2 318 1.2E-77 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS15910 e05b66cdced17c72fe69f6e37770b596 319 PANTHER PTHR30349:SF1 3 282 5.5E-80 T 19-04-2016 ALIDE2_RS09185 5a4b279335614f3fe7e4fb5ded77ae6f 310 Pfam PF09339 IclR helix-turn-helix domain 31 79 1.5E-8 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS09185 5a4b279335614f3fe7e4fb5ded77ae6f 310 SUPERFAMILY SSF55781 92 273 2.6E-48 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS09185 5a4b279335614f3fe7e4fb5ded77ae6f 310 Pfam PF01614 Bacterial transcriptional regulator 146 269 1.6E-30 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS09185 5a4b279335614f3fe7e4fb5ded77ae6f 310 SMART SM00346 29 117 9.4E-9 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS09185 5a4b279335614f3fe7e4fb5ded77ae6f 310 Gene3D G3DSA:1.10.10.10 27 96 2.8E-13 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS09185 5a4b279335614f3fe7e4fb5ded77ae6f 310 SUPERFAMILY SSF46785 31 98 3.95E-10 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS09185 5a4b279335614f3fe7e4fb5ded77ae6f 310 PANTHER PTHR30136 5 284 1.1E-57 T 19-04-2016 ALIDE2_RS09185 5a4b279335614f3fe7e4fb5ded77ae6f 310 Gene3D G3DSA:3.30.450.40 102 273 2.3E-54 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS02715 e74520cfdcc19c5e16f82b2103d29903 934 Pfam PF12531 DNA-K related protein 689 932 3.1E-92 T 19-04-2016 IPR021030 Protein of unknown function DUF3731 ALIDE2_RS02715 e74520cfdcc19c5e16f82b2103d29903 934 SUPERFAMILY SSF53067 12 208 6.8E-27 T 19-04-2016 ALIDE2_RS02715 e74520cfdcc19c5e16f82b2103d29903 934 PANTHER PTHR19375 47 318 5.9E-50 T 19-04-2016 ALIDE2_RS02715 e74520cfdcc19c5e16f82b2103d29903 934 PANTHER PTHR19375 11 28 5.9E-50 T 19-04-2016 ALIDE2_RS02715 e74520cfdcc19c5e16f82b2103d29903 934 Gene3D G3DSA:3.30.420.40 10 228 2.3E-30 T 19-04-2016 ALIDE2_RS02715 e74520cfdcc19c5e16f82b2103d29903 934 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 227 240 - T 19-04-2016 IPR018181 Heat shock protein 70, conserved site ALIDE2_RS02715 e74520cfdcc19c5e16f82b2103d29903 934 PRINTS PR00301 70kDa heat shock protein signature 166 186 2.2E-7 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS02715 e74520cfdcc19c5e16f82b2103d29903 934 PRINTS PR00301 70kDa heat shock protein signature 233 243 2.2E-7 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS02715 e74520cfdcc19c5e16f82b2103d29903 934 PRINTS PR00301 70kDa heat shock protein signature 11 24 2.2E-7 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS02715 e74520cfdcc19c5e16f82b2103d29903 934 PANTHER PTHR19375:SF226 47 318 5.9E-50 T 19-04-2016 ALIDE2_RS02715 e74520cfdcc19c5e16f82b2103d29903 934 PANTHER PTHR19375:SF226 11 28 5.9E-50 T 19-04-2016 ALIDE2_RS02715 e74520cfdcc19c5e16f82b2103d29903 934 Pfam PF00012 Hsp70 protein 136 310 5.9E-15 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS02715 e74520cfdcc19c5e16f82b2103d29903 934 Gene3D G3DSA:3.30.420.40 382 420 2.2E-13 T 19-04-2016 ALIDE2_RS02715 e74520cfdcc19c5e16f82b2103d29903 934 Gene3D G3DSA:3.30.420.40 229 314 2.2E-13 T 19-04-2016 ALIDE2_RS02715 e74520cfdcc19c5e16f82b2103d29903 934 SUPERFAMILY SSF53067 222 447 1.05E-25 T 19-04-2016 ALIDE2_RS20565 8693a0d7b41ce13c0a33a399fdf2a483 537 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 84 107 - T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS20565 8693a0d7b41ce13c0a33a399fdf2a483 537 Pfam PF00732 GMC oxidoreductase 7 300 2.0E-77 T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS20565 8693a0d7b41ce13c0a33a399fdf2a483 537 SUPERFAMILY SSF54373 296 478 8.04E-45 T 19-04-2016 ALIDE2_RS20565 8693a0d7b41ce13c0a33a399fdf2a483 537 PANTHER PTHR11552 5 536 1.0E-179 T 19-04-2016 ALIDE2_RS20565 8693a0d7b41ce13c0a33a399fdf2a483 537 PIRSF PIRSF000137 1 537 1.4E-138 T 19-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 ALIDE2_RS20565 8693a0d7b41ce13c0a33a399fdf2a483 537 Pfam PF05199 GMC oxidoreductase 392 530 4.1E-39 T 19-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 ALIDE2_RS20565 8693a0d7b41ce13c0a33a399fdf2a483 537 SUPERFAMILY SSF51905 474 535 2.33E-83 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS20565 8693a0d7b41ce13c0a33a399fdf2a483 537 SUPERFAMILY SSF51905 5 288 2.33E-83 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS20565 8693a0d7b41ce13c0a33a399fdf2a483 537 Gene3D G3DSA:3.50.50.60 471 536 2.4E-118 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS20565 8693a0d7b41ce13c0a33a399fdf2a483 537 Gene3D G3DSA:3.50.50.60 4 128 2.4E-118 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS20565 8693a0d7b41ce13c0a33a399fdf2a483 537 Gene3D G3DSA:3.50.50.60 190 318 2.4E-118 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS20565 8693a0d7b41ce13c0a33a399fdf2a483 537 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS14440 a3abac53b26cd70a2c0140a2d245bd53 901 SUPERFAMILY SSF52210 125 289 3.14E-40 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS14440 a3abac53b26cd70a2c0140a2d245bd53 901 Pfam PF13549 ATP-grasp domain 474 695 4.0E-82 T 19-04-2016 ALIDE2_RS14440 a3abac53b26cd70a2c0140a2d245bd53 901 Pfam PF00583 Acetyltransferase (GNAT) family 809 884 1.4E-9 T 19-04-2016 IPR000182 GNAT domain GO:0008080 ALIDE2_RS14440 a3abac53b26cd70a2c0140a2d245bd53 901 Gene3D G3DSA:3.40.50.720 60 127 3.7E-9 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS14440 a3abac53b26cd70a2c0140a2d245bd53 901 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 148 284 7.2E-51 T 19-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain ALIDE2_RS14440 a3abac53b26cd70a2c0140a2d245bd53 901 PANTHER PTHR11117:SF8 69 700 9.4E-228 T 19-04-2016 ALIDE2_RS14440 a3abac53b26cd70a2c0140a2d245bd53 901 SUPERFAMILY SSF51735 51 126 1.18E-7 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS14440 a3abac53b26cd70a2c0140a2d245bd53 901 SUPERFAMILY SSF52210 290 447 1.44E-35 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS14440 a3abac53b26cd70a2c0140a2d245bd53 901 Gene3D G3DSA:3.40.630.30 738 886 1.6E-22 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS14440 a3abac53b26cd70a2c0140a2d245bd53 901 SUPERFAMILY SSF55729 739 887 4.97E-23 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS14440 a3abac53b26cd70a2c0140a2d245bd53 901 Gene3D G3DSA:3.40.50.261 280 439 2.4E-15 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS14440 a3abac53b26cd70a2c0140a2d245bd53 901 Pfam PF13380 CoA binding domain 59 130 1.3E-4 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS14440 a3abac53b26cd70a2c0140a2d245bd53 901 SUPERFAMILY SSF56059 482 699 1.51E-39 T 19-04-2016 ALIDE2_RS14440 a3abac53b26cd70a2c0140a2d245bd53 901 PANTHER PTHR11117 69 700 9.4E-228 T 19-04-2016 ALIDE2_RS14440 a3abac53b26cd70a2c0140a2d245bd53 901 Gene3D G3DSA:3.40.50.261 128 279 7.7E-30 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS13300 bb5d08600b788c4d113213565ecdd7d1 493 SUPERFAMILY SSF53067 131 304 1.23E-39 T 19-04-2016 ALIDE2_RS13300 bb5d08600b788c4d113213565ecdd7d1 493 Gene3D G3DSA:1.10.3210.10 326 405 4.7E-4 T 19-04-2016 IPR006674 HD domain ALIDE2_RS13300 bb5d08600b788c4d113213565ecdd7d1 493 Pfam PF02541 Ppx/GppA phosphatase family 26 304 2.7E-71 T 19-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 ALIDE2_RS13300 bb5d08600b788c4d113213565ecdd7d1 493 PIRSF PIRSF001267 1 492 1.7E-164 T 19-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 ALIDE2_RS13300 bb5d08600b788c4d113213565ecdd7d1 493 SUPERFAMILY SSF53067 7 128 3.04E-34 T 19-04-2016 ALIDE2_RS13300 bb5d08600b788c4d113213565ecdd7d1 493 PANTHER PTHR30005 1 416 2.1E-126 T 19-04-2016 ALIDE2_RS13300 bb5d08600b788c4d113213565ecdd7d1 493 Gene3D G3DSA:3.30.420.40 3 125 3.2E-41 T 19-04-2016 ALIDE2_RS13300 bb5d08600b788c4d113213565ecdd7d1 493 SUPERFAMILY SSF109604 309 488 4.32E-39 T 19-04-2016 ALIDE2_RS13300 bb5d08600b788c4d113213565ecdd7d1 493 Gene3D G3DSA:3.30.420.150 127 305 1.6E-45 T 19-04-2016 ALIDE2_RS13300 bb5d08600b788c4d113213565ecdd7d1 493 PANTHER PTHR30005:SF4 1 416 2.1E-126 T 19-04-2016 ALIDE2_RS00255 16e93d0ac4e84434472b3f85fe92d4d7 475 SUPERFAMILY SSF55874 295 464 7.99E-26 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS00255 16e93d0ac4e84434472b3f85fe92d4d7 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 445 1.4E-5 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS00255 16e93d0ac4e84434472b3f85fe92d4d7 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 1.4E-5 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS00255 16e93d0ac4e84434472b3f85fe92d4d7 475 SUPERFAMILY SSF47384 224 303 9.42E-15 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS00255 16e93d0ac4e84434472b3f85fe92d4d7 475 Gene3D G3DSA:3.30.565.10 310 464 5.3E-27 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS00255 16e93d0ac4e84434472b3f85fe92d4d7 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 464 2.7E-14 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS00255 16e93d0ac4e84434472b3f85fe92d4d7 475 SMART SM00388 241 306 1.2E-11 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS00255 16e93d0ac4e84434472b3f85fe92d4d7 475 SMART SM00387 352 468 2.2E-18 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS00255 16e93d0ac4e84434472b3f85fe92d4d7 475 PANTHER PTHR24423 182 464 3.0E-48 T 19-04-2016 ALIDE2_RS00255 16e93d0ac4e84434472b3f85fe92d4d7 475 PANTHER PTHR24423 38 51 3.0E-48 T 19-04-2016 ALIDE2_RS00255 16e93d0ac4e84434472b3f85fe92d4d7 475 PANTHER PTHR24423:SF474 182 464 3.0E-48 T 19-04-2016 ALIDE2_RS00255 16e93d0ac4e84434472b3f85fe92d4d7 475 PANTHER PTHR24423:SF474 38 51 3.0E-48 T 19-04-2016 ALIDE2_RS00255 16e93d0ac4e84434472b3f85fe92d4d7 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 305 4.8E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS00255 16e93d0ac4e84434472b3f85fe92d4d7 475 Pfam PF08521 Two-component sensor kinase N-terminal 27 162 4.9E-27 T 19-04-2016 IPR013727 Two-component sensor kinase, N-terminal ALIDE2_RS00255 16e93d0ac4e84434472b3f85fe92d4d7 475 Gene3D G3DSA:1.10.287.130 234 301 2.5E-11 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS05880 8a9573b5d61a7dee9a9b7bd04f334eb3 476 Gene3D G3DSA:3.40.50.1100 116 207 2.5E-7 T 19-04-2016 ALIDE2_RS05880 8a9573b5d61a7dee9a9b7bd04f334eb3 476 Gene3D G3DSA:3.40.50.1100 208 448 1.9E-90 T 19-04-2016 ALIDE2_RS05880 8a9573b5d61a7dee9a9b7bd04f334eb3 476 PANTHER PTHR10314 57 338 4.2E-131 T 19-04-2016 ALIDE2_RS05880 8a9573b5d61a7dee9a9b7bd04f334eb3 476 PANTHER PTHR10314 25 36 4.2E-131 T 19-04-2016 ALIDE2_RS05880 8a9573b5d61a7dee9a9b7bd04f334eb3 476 PANTHER PTHR10314 374 474 4.2E-131 T 19-04-2016 ALIDE2_RS05880 8a9573b5d61a7dee9a9b7bd04f334eb3 476 Gene3D G3DSA:3.90.1380.10 1 86 1.1E-28 T 19-04-2016 IPR029144 Threonine synthase, N-terminal ALIDE2_RS05880 8a9573b5d61a7dee9a9b7bd04f334eb3 476 SUPERFAMILY SSF53686 1 474 5.09E-149 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS05880 8a9573b5d61a7dee9a9b7bd04f334eb3 476 Pfam PF14821 Threonine synthase N terminus 2 83 6.3E-27 T 19-04-2016 IPR029144 Threonine synthase, N-terminal ALIDE2_RS05880 8a9573b5d61a7dee9a9b7bd04f334eb3 476 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 98 337 1.2E-13 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS05880 8a9573b5d61a7dee9a9b7bd04f334eb3 476 PANTHER PTHR10314:SF1 57 338 4.2E-131 T 19-04-2016 ALIDE2_RS05880 8a9573b5d61a7dee9a9b7bd04f334eb3 476 PANTHER PTHR10314:SF1 25 36 4.2E-131 T 19-04-2016 ALIDE2_RS05880 8a9573b5d61a7dee9a9b7bd04f334eb3 476 PANTHER PTHR10314:SF1 374 474 4.2E-131 T 19-04-2016 ALIDE2_RS05880 8a9573b5d61a7dee9a9b7bd04f334eb3 476 TIGRFAM TIGR00260 thrC: threonine synthase 72 434 3.6E-69 T 19-04-2016 IPR004450 Threonine synthase-like ALIDE2_RS14350 5a1edd0ff38e8e2fba7602c4fb9343cd 445 PANTHER PTHR13794:SF47 173 430 9.8E-258 T 19-04-2016 ALIDE2_RS14350 5a1edd0ff38e8e2fba7602c4fb9343cd 445 PANTHER PTHR13794:SF47 4 149 9.8E-258 T 19-04-2016 ALIDE2_RS14350 5a1edd0ff38e8e2fba7602c4fb9343cd 445 Gene3D G3DSA:3.20.20.120 117 148 4.1E-99 T 19-04-2016 IPR029065 Enolase C-terminal domain-like ALIDE2_RS14350 5a1edd0ff38e8e2fba7602c4fb9343cd 445 Gene3D G3DSA:3.20.20.120 180 397 4.1E-99 T 19-04-2016 IPR029065 Enolase C-terminal domain-like ALIDE2_RS14350 5a1edd0ff38e8e2fba7602c4fb9343cd 445 SUPERFAMILY SSF54826 4 134 2.3E-31 T 19-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ALIDE2_RS14350 5a1edd0ff38e8e2fba7602c4fb9343cd 445 SUPERFAMILY SSF51604 136 414 3.36E-76 T 19-04-2016 IPR029065 Enolase C-terminal domain-like ALIDE2_RS14350 5a1edd0ff38e8e2fba7602c4fb9343cd 445 SMART SM00922 185 285 4.1E-14 T 19-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ALIDE2_RS14350 5a1edd0ff38e8e2fba7602c4fb9343cd 445 Pfam PF13378 Enolase C-terminal domain-like 188 404 5.6E-34 T 19-04-2016 IPR029065 Enolase C-terminal domain-like ALIDE2_RS14350 5a1edd0ff38e8e2fba7602c4fb9343cd 445 Gene3D G3DSA:3.30.390.10 7 116 8.9E-12 T 19-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ALIDE2_RS14350 5a1edd0ff38e8e2fba7602c4fb9343cd 445 PANTHER PTHR13794 173 430 9.8E-258 T 19-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 ALIDE2_RS14350 5a1edd0ff38e8e2fba7602c4fb9343cd 445 PANTHER PTHR13794 4 149 9.8E-258 T 19-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 ALIDE2_RS17595 7f269afd460422ed6debb338dd8822b9 215 Gene3D G3DSA:3.50.30.50 8 212 1.5E-51 T 19-04-2016 ALIDE2_RS17595 7f269afd460422ed6debb338dd8822b9 215 TIGRFAM TIGR03035 trp_arylform: arylformamidase 8 214 1.6E-84 T 19-04-2016 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 ALIDE2_RS17595 7f269afd460422ed6debb338dd8822b9 215 Hamap MF_01969 Kynurenine formamidase [kynB]. 8 214 41.724 T 19-04-2016 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 ALIDE2_RS17595 7f269afd460422ed6debb338dd8822b9 215 Pfam PF04199 Putative cyclase 11 157 2.1E-15 T 19-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 ALIDE2_RS17595 7f269afd460422ed6debb338dd8822b9 215 SUPERFAMILY SSF102198 8 212 2.88E-55 T 19-04-2016 ALIDE2_RS17595 7f269afd460422ed6debb338dd8822b9 215 PANTHER PTHR31118 6 211 1.7E-40 T 19-04-2016 ALIDE2_RS08135 8ca39e5aba302e75564a1cd9ae8159bf 453 PANTHER PTHR36932:SF1 5 363 8.1E-46 T 19-04-2016 ALIDE2_RS08135 8ca39e5aba302e75564a1cd9ae8159bf 453 PANTHER PTHR36932 5 363 8.1E-46 T 19-04-2016 ALIDE2_RS08135 8ca39e5aba302e75564a1cd9ae8159bf 453 Gene3D G3DSA:3.30.300.30 341 431 6.5E-16 T 19-04-2016 ALIDE2_RS08135 8ca39e5aba302e75564a1cd9ae8159bf 453 Gene3D G3DSA:3.40.50.980 275 298 5.7E-4 T 19-04-2016 ALIDE2_RS08135 8ca39e5aba302e75564a1cd9ae8159bf 453 Gene3D G3DSA:3.40.50.980 122 203 5.7E-4 T 19-04-2016 ALIDE2_RS08135 8ca39e5aba302e75564a1cd9ae8159bf 453 SUPERFAMILY SSF56801 34 409 1.7E-33 T 19-04-2016 ALIDE2_RS08135 8ca39e5aba302e75564a1cd9ae8159bf 453 Pfam PF00501 AMP-binding enzyme 31 304 6.5E-7 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS04865 21aeba3159916ca1c27b4ceb98e66cf0 245 SMART SM00062 16 236 4.3E-23 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS04865 21aeba3159916ca1c27b4ceb98e66cf0 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 228 1.1E-18 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS04865 21aeba3159916ca1c27b4ceb98e66cf0 245 Gene3D G3DSA:3.40.190.10 6 138 1.7E-16 T 19-04-2016 ALIDE2_RS04865 21aeba3159916ca1c27b4ceb98e66cf0 245 SUPERFAMILY SSF53850 18 233 2.62E-31 T 19-04-2016 ALIDE2_RS20175 9a5d98664d2282752b3fc8deccafc754 181 PANTHER PTHR32194 1 181 3.5E-113 T 19-04-2016 ALIDE2_RS20175 9a5d98664d2282752b3fc8deccafc754 181 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 181 40.479 T 19-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 ALIDE2_RS20175 9a5d98664d2282752b3fc8deccafc754 181 Gene3D G3DSA:3.60.20.10 7 181 1.3E-80 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS20175 9a5d98664d2282752b3fc8deccafc754 181 SUPERFAMILY SSF56235 3 181 1.32E-54 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS20175 9a5d98664d2282752b3fc8deccafc754 181 Pfam PF00227 Proteasome subunit 5 179 1.8E-18 T 19-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 ALIDE2_RS20175 9a5d98664d2282752b3fc8deccafc754 181 PIRSF PIRSF039093 1 181 1.7E-83 T 19-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 ALIDE2_RS20175 9a5d98664d2282752b3fc8deccafc754 181 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 181 1.8E-81 T 19-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 ALIDE2_RS15285 19a9527276e01feeef9267a9022fdff7 235 Gene3D G3DSA:3.40.50.300 1 225 8.6E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15285 19a9527276e01feeef9267a9022fdff7 235 Pfam PF00005 ABC transporter 17 159 1.8E-25 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS15285 19a9527276e01feeef9267a9022fdff7 235 SMART SM00382 26 210 1.2E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS15285 19a9527276e01feeef9267a9022fdff7 235 PANTHER PTHR24220 3 218 1.3E-86 T 19-04-2016 ALIDE2_RS15285 19a9527276e01feeef9267a9022fdff7 235 PANTHER PTHR24220:SF568 3 218 1.3E-86 T 19-04-2016 ALIDE2_RS15285 19a9527276e01feeef9267a9022fdff7 235 SUPERFAMILY SSF52540 2 222 1.09E-55 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15285 19a9527276e01feeef9267a9022fdff7 235 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS02820 ab3cdb98e6a8c0f7a6a8e2375b2730dd 145 PANTHER PTHR10438 30 145 8.5E-41 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ALIDE2_RS02820 ab3cdb98e6a8c0f7a6a8e2375b2730dd 145 Gene3D G3DSA:1.10.1130.10 5 38 4.3E-4 T 19-04-2016 IPR012286 Tetrahaem cytochrome domain ALIDE2_RS02820 ab3cdb98e6a8c0f7a6a8e2375b2730dd 145 Pfam PF00085 Thioredoxin 44 142 3.0E-29 T 19-04-2016 IPR013766 Thioredoxin domain GO:0045454 ALIDE2_RS02820 ab3cdb98e6a8c0f7a6a8e2375b2730dd 145 ProSitePatterns PS00194 Thioredoxin family active site. 62 80 - T 19-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 ALIDE2_RS02820 ab3cdb98e6a8c0f7a6a8e2375b2730dd 145 Gene3D G3DSA:3.40.30.10 40 143 9.5E-35 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS02820 ab3cdb98e6a8c0f7a6a8e2375b2730dd 145 SUPERFAMILY SSF52833 30 143 4.69E-38 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS02820 ab3cdb98e6a8c0f7a6a8e2375b2730dd 145 PRINTS PR00421 Thioredoxin family signature 69 78 1.8E-9 T 19-04-2016 ALIDE2_RS02820 ab3cdb98e6a8c0f7a6a8e2375b2730dd 145 PRINTS PR00421 Thioredoxin family signature 61 69 1.8E-9 T 19-04-2016 ALIDE2_RS02820 ab3cdb98e6a8c0f7a6a8e2375b2730dd 145 PRINTS PR00421 Thioredoxin family signature 109 120 1.8E-9 T 19-04-2016 ALIDE2_RS02820 ab3cdb98e6a8c0f7a6a8e2375b2730dd 145 PANTHER PTHR10438:SF281 30 145 8.5E-41 T 19-04-2016 ALIDE2_RS02820 ab3cdb98e6a8c0f7a6a8e2375b2730dd 145 TIGRFAM TIGR01068 thioredoxin: thioredoxin 47 143 2.0E-31 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ALIDE2_RS01550 de82cfadfe197995ff52d49c782bd261 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.3E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS01550 de82cfadfe197995ff52d49c782bd261 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.3E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS01550 de82cfadfe197995ff52d49c782bd261 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.3E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS01550 de82cfadfe197995ff52d49c782bd261 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.3E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS01550 de82cfadfe197995ff52d49c782bd261 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.3E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS01550 de82cfadfe197995ff52d49c782bd261 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.3E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS01550 de82cfadfe197995ff52d49c782bd261 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 3.4E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS01550 de82cfadfe197995ff52d49c782bd261 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.4E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS01550 de82cfadfe197995ff52d49c782bd261 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 3.4E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS01550 de82cfadfe197995ff52d49c782bd261 257 Gene3D G3DSA:3.40.50.720 4 251 1.8E-75 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS01550 de82cfadfe197995ff52d49c782bd261 257 SUPERFAMILY SSF51735 8 252 2.02E-70 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS01550 de82cfadfe197995ff52d49c782bd261 257 PANTHER PTHR24322 17 145 2.7E-51 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS01550 de82cfadfe197995ff52d49c782bd261 257 PANTHER PTHR24322 161 193 2.7E-51 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS01550 de82cfadfe197995ff52d49c782bd261 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 250 4.0E-53 T 19-04-2016 ALIDE2_RS18245 5875cc71b3045aff8f7156ec02c9d25a 552 PANTHER PTHR11814 6 535 1.1E-199 T 19-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 ALIDE2_RS18245 5875cc71b3045aff8f7156ec02c9d25a 552 Pfam PF01740 STAS domain 474 545 2.6E-9 T 19-04-2016 IPR002645 STAS domain ALIDE2_RS18245 5875cc71b3045aff8f7156ec02c9d25a 552 Pfam PF00916 Sulfate permease family 26 387 3.1E-88 T 19-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 ALIDE2_RS18245 5875cc71b3045aff8f7156ec02c9d25a 552 PANTHER PTHR11814:SF112 6 535 1.1E-199 T 19-04-2016 ALIDE2_RS18245 5875cc71b3045aff8f7156ec02c9d25a 552 Gene3D G3DSA:3.30.750.24 449 549 6.4E-13 T 19-04-2016 IPR002645 STAS domain ALIDE2_RS18245 5875cc71b3045aff8f7156ec02c9d25a 552 SUPERFAMILY SSF52091 448 548 2.16E-14 T 19-04-2016 IPR002645 STAS domain ALIDE2_RS18625 971784e570f62387c6e757b6440aff70 473 PANTHER PTHR30624 24 473 2.5E-135 T 19-04-2016 ALIDE2_RS18625 971784e570f62387c6e757b6440aff70 473 PANTHER PTHR30624:SF1 24 473 2.5E-135 T 19-04-2016 ALIDE2_RS18625 971784e570f62387c6e757b6440aff70 473 SUPERFAMILY SSF111283 30 472 7.98E-117 T 19-04-2016 ALIDE2_RS18625 971784e570f62387c6e757b6440aff70 473 Pfam PF01523 Putative modulator of DNA gyrase 55 346 1.9E-49 T 19-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS08860 a13e9f07fd9cc00ead32c648fb96ded5 238 SMART SM00382 32 216 3.0E-12 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS08860 a13e9f07fd9cc00ead32c648fb96ded5 238 SUPERFAMILY SSF52540 5 223 9.45E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08860 a13e9f07fd9cc00ead32c648fb96ded5 238 PANTHER PTHR24220 9 221 1.3E-53 T 19-04-2016 ALIDE2_RS08860 a13e9f07fd9cc00ead32c648fb96ded5 238 Gene3D G3DSA:3.40.50.300 6 223 5.4E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08860 a13e9f07fd9cc00ead32c648fb96ded5 238 Pfam PF00005 ABC transporter 23 160 1.5E-22 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS01000 5525c61c121ad484e52ee63df544d5a7 445 Pfam PF00665 Integrase core domain 65 185 9.9E-14 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS01000 5525c61c121ad484e52ee63df544d5a7 445 PANTHER PTHR35004:SF2 1 379 8.6E-57 T 19-04-2016 ALIDE2_RS01000 5525c61c121ad484e52ee63df544d5a7 445 Gene3D G3DSA:3.30.420.10 95 214 4.5E-4 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS01000 5525c61c121ad484e52ee63df544d5a7 445 PANTHER PTHR35004 1 379 8.6E-57 T 19-04-2016 ALIDE2_RS13605 c691f3a3c638461709f7f1e310b8d7eb 171 PANTHER PTHR30204 25 144 1.4E-24 T 19-04-2016 ALIDE2_RS13605 c691f3a3c638461709f7f1e310b8d7eb 171 SUPERFAMILY SSF46955 33 155 5.49E-27 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS13605 c691f3a3c638461709f7f1e310b8d7eb 171 PANTHER PTHR30204:SF18 25 144 1.4E-24 T 19-04-2016 ALIDE2_RS13605 c691f3a3c638461709f7f1e310b8d7eb 171 SMART SM00422 33 101 7.1E-21 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS13605 c691f3a3c638461709f7f1e310b8d7eb 171 Pfam PF00376 MerR family regulatory protein 34 70 6.8E-7 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS13605 c691f3a3c638461709f7f1e310b8d7eb 171 Pfam PF09278 MerR, DNA binding 75 136 1.8E-15 T 19-04-2016 IPR015358 Transcription regulator MerR, DNA binding ALIDE2_RS13605 c691f3a3c638461709f7f1e310b8d7eb 171 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 68 88 1.2E-16 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS13605 c691f3a3c638461709f7f1e310b8d7eb 171 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 34 45 1.2E-16 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS13605 c691f3a3c638461709f7f1e310b8d7eb 171 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 45 58 1.2E-16 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS13605 c691f3a3c638461709f7f1e310b8d7eb 171 Gene3D G3DSA:1.10.1660.10 32 87 1.1E-19 T 19-04-2016 ALIDE2_RS13605 c691f3a3c638461709f7f1e310b8d7eb 171 Gene3D G3DSA:1.10.1660.10 88 158 4.4E-23 T 19-04-2016 ALIDE2_RS03605 e2df2774eed4c4e95a372817817bc998 121 PANTHER PTHR30561 1 121 3.0E-13 T 19-04-2016 ALIDE2_RS03605 e2df2774eed4c4e95a372817817bc998 121 PANTHER PTHR30561:SF9 1 121 3.0E-13 T 19-04-2016 ALIDE2_RS03605 e2df2774eed4c4e95a372817817bc998 121 SUPERFAMILY SSF103481 50 120 4.58E-8 T 19-04-2016 ALIDE2_RS05675 183d4229fa0ac5034dc94c0419a946cb 299 Gene3D G3DSA:3.40.50.1980 47 155 6.5E-25 T 19-04-2016 ALIDE2_RS05675 183d4229fa0ac5034dc94c0419a946cb 299 Gene3D G3DSA:3.40.50.1980 171 294 2.4E-24 T 19-04-2016 ALIDE2_RS05675 183d4229fa0ac5034dc94c0419a946cb 299 PANTHER PTHR30535 6 294 1.6E-51 T 19-04-2016 ALIDE2_RS05675 183d4229fa0ac5034dc94c0419a946cb 299 SUPERFAMILY SSF53807 29 294 1.61E-51 T 19-04-2016 ALIDE2_RS05675 183d4229fa0ac5034dc94c0419a946cb 299 Pfam PF01497 Periplasmic binding protein 51 267 1.5E-24 T 19-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 ALIDE2_RS07725 cead80c872d33d963deac762ca83ae94 324 PANTHER PTHR30482:SF10 11 317 4.9E-96 T 19-04-2016 ALIDE2_RS07725 cead80c872d33d963deac762ca83ae94 324 PANTHER PTHR30482 11 317 4.9E-96 T 19-04-2016 ALIDE2_RS07725 cead80c872d33d963deac762ca83ae94 324 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 294 3.1E-38 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS21635 59b5c7c9779f595236ae2bbf49ce4c27 101 PANTHER PTHR19836 1 101 3.5E-50 T 19-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21635 59b5c7c9779f595236ae2bbf49ce4c27 101 SUPERFAMILY SSF57716 2 101 1.07E-34 T 19-04-2016 ALIDE2_RS21635 59b5c7c9779f595236ae2bbf49ce4c27 101 Gene3D G3DSA:4.10.830.10 43 101 4.0E-28 T 19-04-2016 ALIDE2_RS21635 59b5c7c9779f595236ae2bbf49ce4c27 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.337 T 19-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid ALIDE2_RS21635 59b5c7c9779f595236ae2bbf49ce4c27 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 6.2E-25 T 19-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS02030 4eb4c589f61d389c45a68249c25d22be 143 Gene3D G3DSA:3.30.1550.10 2 72 4.6E-36 T 19-04-2016 IPR020784 Ribosomal protein L11, N-terminal ALIDE2_RS02030 4eb4c589f61d389c45a68249c25d22be 143 SUPERFAMILY SSF54747 3 73 7.85E-30 T 19-04-2016 IPR020784 Ribosomal protein L11, N-terminal ALIDE2_RS02030 4eb4c589f61d389c45a68249c25d22be 143 SUPERFAMILY SSF46906 68 141 3.53E-24 T 19-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS02030 4eb4c589f61d389c45a68249c25d22be 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.833 T 19-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS02030 4eb4c589f61d389c45a68249c25d22be 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.0E-21 T 19-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS02030 4eb4c589f61d389c45a68249c25d22be 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.5E-28 T 19-04-2016 IPR020784 Ribosomal protein L11, N-terminal ALIDE2_RS02030 4eb4c589f61d389c45a68249c25d22be 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 19-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS02030 4eb4c589f61d389c45a68249c25d22be 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 3.0E-16 T 19-04-2016 ALIDE2_RS02030 4eb4c589f61d389c45a68249c25d22be 143 SMART SM00649 9 141 1.6E-80 T 19-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS02030 4eb4c589f61d389c45a68249c25d22be 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.0E-62 T 19-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS02030 4eb4c589f61d389c45a68249c25d22be 143 PANTHER PTHR11661 1 142 4.9E-66 T 19-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS02030 4eb4c589f61d389c45a68249c25d22be 143 Gene3D G3DSA:1.10.10.250 73 141 8.3E-28 T 19-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS13875 e163cb2fd69058aa598291620f2d6264 635 Pfam PF12696 TraM recognition site of TraD and TraG 474 599 4.7E-12 T 19-04-2016 IPR032689 TraD/TraG, TraM recognition site ALIDE2_RS13875 e163cb2fd69058aa598291620f2d6264 635 Gene3D G3DSA:3.40.50.300 422 622 7.7E-33 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13875 e163cb2fd69058aa598291620f2d6264 635 Gene3D G3DSA:3.40.50.300 144 239 7.7E-33 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13875 e163cb2fd69058aa598291620f2d6264 635 SUPERFAMILY SSF52540 99 315 4.78E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13875 e163cb2fd69058aa598291620f2d6264 635 SUPERFAMILY SSF52540 376 623 4.78E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13875 e163cb2fd69058aa598291620f2d6264 635 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 6 620 7.3E-204 T 19-04-2016 IPR022458 Conjugative coupling factor TraG/TraD ALIDE2_RS14855 e37e9658c8a22d2460197796d3c8d2d6 512 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 8 225 1.4E-72 T 19-04-2016 IPR007357 Deoxyribodipyrimidine photolyase-related protein ALIDE2_RS14855 e37e9658c8a22d2460197796d3c8d2d6 512 PANTHER PTHR38657 1 512 2.5E-220 T 19-04-2016 ALIDE2_RS14855 e37e9658c8a22d2460197796d3c8d2d6 512 PANTHER PTHR38657:SF1 1 512 2.5E-220 T 19-04-2016 ALIDE2_RS14855 e37e9658c8a22d2460197796d3c8d2d6 512 Gene3D G3DSA:1.25.40.80 229 323 3.2E-10 T 19-04-2016 ALIDE2_RS14855 e37e9658c8a22d2460197796d3c8d2d6 512 SUPERFAMILY SSF48173 231 497 1.57E-59 T 19-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain ALIDE2_RS10785 2712a2d8c3014d09dab159a2b9c521cf 92 Pfam PF00403 Heavy-metal-associated domain 26 86 1.5E-17 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS10785 2712a2d8c3014d09dab159a2b9c521cf 92 PRINTS PR00946 Mercury scavenger protein signature 63 77 7.7E-21 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS10785 2712a2d8c3014d09dab159a2b9c521cf 92 PRINTS PR00946 Mercury scavenger protein signature 48 63 7.7E-21 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS10785 2712a2d8c3014d09dab159a2b9c521cf 92 PRINTS PR00946 Mercury scavenger protein signature 32 48 7.7E-21 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS10785 2712a2d8c3014d09dab159a2b9c521cf 92 PRINTS PR00946 Mercury scavenger protein signature 2 20 7.7E-21 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS10785 2712a2d8c3014d09dab159a2b9c521cf 92 PRINTS PR00946 Mercury scavenger protein signature 77 91 7.7E-21 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS10785 2712a2d8c3014d09dab159a2b9c521cf 92 Gene3D G3DSA:3.30.70.100 23 90 1.3E-21 T 19-04-2016 ALIDE2_RS10785 2712a2d8c3014d09dab159a2b9c521cf 92 SUPERFAMILY SSF55008 20 90 2.62E-20 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS10785 2712a2d8c3014d09dab159a2b9c521cf 92 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 4 91 9.3E-28 T 19-04-2016 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 ALIDE2_RS16925 1fba74feec0af95c1d5aca6fd5df74c1 282 Gene3D G3DSA:3.30.70.1070 206 280 1.9E-19 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 ALIDE2_RS16925 1fba74feec0af95c1d5aca6fd5df74c1 282 Pfam PF05036 Sporulation related domain 207 280 5.4E-17 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 ALIDE2_RS16925 1fba74feec0af95c1d5aca6fd5df74c1 282 PANTHER PTHR38687 38 271 2.9E-12 T 19-04-2016 ALIDE2_RS16925 1fba74feec0af95c1d5aca6fd5df74c1 282 SUPERFAMILY SSF110997 206 279 7.32E-17 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 ALIDE2_RS16925 1fba74feec0af95c1d5aca6fd5df74c1 282 PANTHER PTHR38687:SF1 38 271 2.9E-12 T 19-04-2016 ALIDE2_RS05180 89a942f4ab70df5a50b7346353e85c17 167 SUPERFAMILY SSF54637 13 163 1.4E-47 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS05180 89a942f4ab70df5a50b7346353e85c17 167 PANTHER PTHR13078 11 163 6.7E-74 T 19-04-2016 ALIDE2_RS05180 89a942f4ab70df5a50b7346353e85c17 167 Pfam PF01575 MaoC like domain 25 136 3.5E-20 T 19-04-2016 IPR002539 MaoC-like domain ALIDE2_RS05180 89a942f4ab70df5a50b7346353e85c17 167 Gene3D G3DSA:3.10.129.10 13 162 1.1E-43 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS08015 6fba117c5433c583b0ebbdd9ad66f7c7 361 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 17 344 1.8E-118 T 19-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 ALIDE2_RS08015 6fba117c5433c583b0ebbdd9ad66f7c7 361 PANTHER PTHR10361 10 352 1.3E-121 T 19-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ALIDE2_RS08015 6fba117c5433c583b0ebbdd9ad66f7c7 361 Pfam PF01758 Sodium Bile acid symporter family 63 257 2.2E-36 T 19-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ALIDE2_RS08015 6fba117c5433c583b0ebbdd9ad66f7c7 361 PANTHER PTHR10361:SF31 10 352 1.3E-121 T 19-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 ALIDE2_RS08015 6fba117c5433c583b0ebbdd9ad66f7c7 361 PIRSF PIRSF005508 3 359 9.1E-119 T 19-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 ALIDE2_RS19615 c7c40007b07eb5623e4b68d48fb4af83 294 PANTHER PTHR11403:SF0 149 294 1.2E-86 T 19-04-2016 ALIDE2_RS19615 c7c40007b07eb5623e4b68d48fb4af83 294 PANTHER PTHR11403:SF0 13 120 1.2E-86 T 19-04-2016 ALIDE2_RS19615 c7c40007b07eb5623e4b68d48fb4af83 294 SUPERFAMILY SSF81452 10 294 1.57E-74 T 19-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 ALIDE2_RS19615 c7c40007b07eb5623e4b68d48fb4af83 294 PANTHER PTHR11403 149 294 1.2E-86 T 19-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 ALIDE2_RS19615 c7c40007b07eb5623e4b68d48fb4af83 294 PANTHER PTHR11403 13 120 1.2E-86 T 19-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 ALIDE2_RS19615 c7c40007b07eb5623e4b68d48fb4af83 294 Pfam PF00510 Cytochrome c oxidase subunit III 126 293 4.0E-45 T 19-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 ALIDE2_RS19615 c7c40007b07eb5623e4b68d48fb4af83 294 Pfam PF00510 Cytochrome c oxidase subunit III 13 119 4.0E-11 T 19-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 ALIDE2_RS19615 c7c40007b07eb5623e4b68d48fb4af83 294 Gene3D G3DSA:1.20.120.80 84 294 9.0E-61 T 19-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 ALIDE2_RS19615 c7c40007b07eb5623e4b68d48fb4af83 294 Gene3D G3DSA:1.10.287.70 12 74 7.6E-15 T 19-04-2016 ALIDE2_RS02585 e0a4040d19d914fe481871d2d54980fc 289 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 77 285 1.5E-61 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS02585 e0a4040d19d914fe481871d2d54980fc 289 SUPERFAMILY SSF56529 64 286 3.92E-73 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS02585 e0a4040d19d914fe481871d2d54980fc 289 PANTHER PTHR11820:SF6 1 289 1.4E-102 T 19-04-2016 ALIDE2_RS02585 e0a4040d19d914fe481871d2d54980fc 289 PANTHER PTHR11820 1 289 1.4E-102 T 19-04-2016 ALIDE2_RS02585 e0a4040d19d914fe481871d2d54980fc 289 Gene3D G3DSA:3.90.850.10 68 288 3.7E-73 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS06195 28bc2733005ebd0ccc78d4144e64eadf 612 PANTHER PTHR10909 58 480 4.9E-151 T 19-04-2016 ALIDE2_RS06195 28bc2733005ebd0ccc78d4144e64eadf 612 Gene3D G3DSA:1.20.140.10 292 465 1.2E-37 T 19-04-2016 ALIDE2_RS06195 28bc2733005ebd0ccc78d4144e64eadf 612 SUPERFAMILY SSF56645 115 313 4.58E-37 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS06195 28bc2733005ebd0ccc78d4144e64eadf 612 SUPERFAMILY SSF47203 303 464 3.87E-34 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS06195 28bc2733005ebd0ccc78d4144e64eadf 612 Gene3D G3DSA:2.40.110.10 195 291 2.1E-16 T 19-04-2016 ALIDE2_RS06195 28bc2733005ebd0ccc78d4144e64eadf 612 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 305 460 1.1E-31 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS06195 28bc2733005ebd0ccc78d4144e64eadf 612 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 198 293 5.0E-14 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS06195 28bc2733005ebd0ccc78d4144e64eadf 612 PANTHER PTHR10909:SF262 58 480 4.9E-151 T 19-04-2016 ALIDE2_RS06195 28bc2733005ebd0ccc78d4144e64eadf 612 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 419 438 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS13280 4fa4a529f33961a816068ebbe4951925 262 PANTHER PTHR24220 17 257 3.5E-163 T 19-04-2016 ALIDE2_RS13280 4fa4a529f33961a816068ebbe4951925 262 SUPERFAMILY SSF52540 14 248 2.08E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13280 4fa4a529f33961a816068ebbe4951925 262 SMART SM00382 40 250 5.0E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS13280 4fa4a529f33961a816068ebbe4951925 262 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 16 262 9.7E-120 T 19-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 ALIDE2_RS13280 4fa4a529f33961a816068ebbe4951925 262 Gene3D G3DSA:3.40.50.300 8 253 4.6E-70 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13280 4fa4a529f33961a816068ebbe4951925 262 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS13280 4fa4a529f33961a816068ebbe4951925 262 PANTHER PTHR24220:SF560 17 257 3.5E-163 T 19-04-2016 ALIDE2_RS13280 4fa4a529f33961a816068ebbe4951925 262 Pfam PF00005 ABC transporter 31 186 4.1E-33 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS08220 e493a6db5bd8abc70e597f5c1635bfb9 215 PANTHER PTHR10422 37 157 4.9E-26 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS08220 e493a6db5bd8abc70e597f5c1635bfb9 215 Gene3D G3DSA:1.10.760.10 32 184 8.3E-20 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS08220 e493a6db5bd8abc70e597f5c1635bfb9 215 SUPERFAMILY SSF46626 41 184 5.58E-22 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS08220 e493a6db5bd8abc70e597f5c1635bfb9 215 PANTHER PTHR10422:SF23 37 157 4.9E-26 T 19-04-2016 ALIDE2_RS08220 e493a6db5bd8abc70e597f5c1635bfb9 215 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 6 146 1.9E-39 T 19-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO ALIDE2_RS23715 abd6299c9b9ce143f37f5abc572bef38 86 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 28 83 9.5E-13 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS23715 abd6299c9b9ce143f37f5abc572bef38 86 Gene3D G3DSA:3.30.450.20 11 81 1.6E-15 T 19-04-2016 ALIDE2_RS23715 abd6299c9b9ce143f37f5abc572bef38 86 Pfam PF00989 PAS fold 29 78 2.8E-12 T 19-04-2016 IPR013767 PAS fold GO:0006355 ALIDE2_RS23715 abd6299c9b9ce143f37f5abc572bef38 86 SUPERFAMILY SSF55785 24 81 3.77E-15 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS23715 abd6299c9b9ce143f37f5abc572bef38 86 SMART SM00091 25 84 7.8E-7 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 SMART SM00722 193 352 0.035 T 19-04-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 SMART SM00722 39 187 1.3E-9 T 19-04-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 Gene3D G3DSA:2.160.20.10 11 381 1.8E-40 T 19-04-2016 IPR012334 Pectin lyase fold ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 SUPERFAMILY SSF51126 26 391 6.29E-70 T 19-04-2016 IPR011050 Pectin lyase fold/virulence factor ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 32 405 6.3E-140 T 19-04-2016 IPR026464 Nitrous oxide reductase family maturation protein NosD ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 250 292 1.3E-5 T 19-04-2016 IPR022441 Parallel beta-helix repeat-2 ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 SMART SM00710 301 338 4700.0 T 19-04-2016 IPR006626 Parallel beta-helix repeat ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 SMART SM00710 137 166 83.0 T 19-04-2016 IPR006626 Parallel beta-helix repeat ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 SMART SM00710 189 210 670.0 T 19-04-2016 IPR006626 Parallel beta-helix repeat ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 SMART SM00710 85 113 58.0 T 19-04-2016 IPR006626 Parallel beta-helix repeat ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 SMART SM00710 115 136 2000.0 T 19-04-2016 IPR006626 Parallel beta-helix repeat ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 SMART SM00710 167 188 1500.0 T 19-04-2016 IPR006626 Parallel beta-helix repeat ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 SMART SM00710 256 277 97.0 T 19-04-2016 IPR006626 Parallel beta-helix repeat ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 SMART SM00710 233 255 1100.0 T 19-04-2016 IPR006626 Parallel beta-helix repeat ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 SMART SM00710 278 299 280.0 T 19-04-2016 IPR006626 Parallel beta-helix repeat ALIDE2_RS06825 ad955b3cf536265d6d5214c0e253c600 422 Pfam PF05048 Periplasmic copper-binding protein (NosD) 144 368 5.2E-61 T 19-04-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain ALIDE2_RS01850 86151a67e56189fb7cd61fc2446b1a0c 326 Hamap MF_00206 Lipoyl synthase [lipA]. 1 326 155.612 T 19-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 ALIDE2_RS01850 86151a67e56189fb7cd61fc2446b1a0c 326 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 31 79 1.4E-7 T 19-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 ALIDE2_RS01850 86151a67e56189fb7cd61fc2446b1a0c 326 TIGRFAM TIGR00510 lipA: lipoyl synthase 35 320 9.9E-130 T 19-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 ALIDE2_RS01850 86151a67e56189fb7cd61fc2446b1a0c 326 PIRSF PIRSF005963 2 325 1.2E-128 T 19-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 ALIDE2_RS01850 86151a67e56189fb7cd61fc2446b1a0c 326 SUPERFAMILY SSF102114 58 322 4.05E-71 T 19-04-2016 ALIDE2_RS01850 86151a67e56189fb7cd61fc2446b1a0c 326 Pfam PF04055 Radical SAM superfamily 97 256 8.1E-17 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ALIDE2_RS01850 86151a67e56189fb7cd61fc2446b1a0c 326 SMART SM00729 90 298 1.0E-21 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ALIDE2_RS01850 86151a67e56189fb7cd61fc2446b1a0c 326 PANTHER PTHR10949 25 320 1.6E-165 T 19-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 ALIDE2_RS01850 86151a67e56189fb7cd61fc2446b1a0c 326 Gene3D G3DSA:3.20.20.70 59 320 6.6E-76 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS08370 5c8f9f10c0b01787feb779d5312728a3 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS08370 5c8f9f10c0b01787feb779d5312728a3 258 SUPERFAMILY SSF52096 2 258 3.02E-83 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS08370 5c8f9f10c0b01787feb779d5312728a3 258 PANTHER PTHR11941 3 255 6.9E-89 T 19-04-2016 ALIDE2_RS08370 5c8f9f10c0b01787feb779d5312728a3 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 257 1.9E-65 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS08370 5c8f9f10c0b01787feb779d5312728a3 258 PANTHER PTHR11941:SF54 3 255 6.9E-89 T 19-04-2016 ALIDE2_RS08370 5c8f9f10c0b01787feb779d5312728a3 258 Gene3D G3DSA:3.90.226.10 2 256 1.2E-84 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS14875 dde953d0c2520526084805de572b060b 324 SUPERFAMILY SSF52242 199 300 3.53E-20 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 ALIDE2_RS14875 dde953d0c2520526084805de572b060b 324 SUPERFAMILY SSF46955 21 88 1.92E-12 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS14875 dde953d0c2520526084805de572b060b 324 Gene3D G3DSA:1.10.1660.10 22 79 1.2E-12 T 19-04-2016 ALIDE2_RS14875 dde953d0c2520526084805de572b060b 324 Gene3D G3DSA:3.40.50.280 203 294 5.2E-16 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 ALIDE2_RS14875 dde953d0c2520526084805de572b060b 324 Pfam PF02310 B12 binding domain 204 299 5.5E-13 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 ALIDE2_RS14875 dde953d0c2520526084805de572b060b 324 Pfam PF13411 MerR HTH family regulatory protein 22 78 3.1E-11 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS14875 dde953d0c2520526084805de572b060b 324 SMART SM00422 20 95 0.0013 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS20610 990f074f41009fa2dc64fb08fc7787d5 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 186 8.4E-19 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS20610 990f074f41009fa2dc64fb08fc7787d5 220 SUPERFAMILY SSF56784 3 219 6.35E-50 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS20610 990f074f41009fa2dc64fb08fc7787d5 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 62 187 2.7E-13 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ALIDE2_RS20610 990f074f41009fa2dc64fb08fc7787d5 220 PANTHER PTHR18901:SF9 1 219 1.2E-51 T 19-04-2016 ALIDE2_RS20610 990f074f41009fa2dc64fb08fc7787d5 220 Gene3D G3DSA:3.40.50.1000 2 18 5.9E-40 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS20610 990f074f41009fa2dc64fb08fc7787d5 220 Gene3D G3DSA:3.40.50.1000 86 219 5.9E-40 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS20610 990f074f41009fa2dc64fb08fc7787d5 220 Gene3D G3DSA:1.10.150.240 19 84 1.1E-19 T 19-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 ALIDE2_RS20610 990f074f41009fa2dc64fb08fc7787d5 220 PANTHER PTHR18901 1 219 1.2E-51 T 19-04-2016 ALIDE2_RS23130 b543cc20568f6162a46aef7244e4bda9 325 Pfam PF02424 ApbE family 22 305 7.7E-75 T 19-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 ALIDE2_RS23130 b543cc20568f6162a46aef7244e4bda9 325 PIRSF PIRSF006268 3 321 1.9E-75 T 19-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 ALIDE2_RS23130 b543cc20568f6162a46aef7244e4bda9 325 PANTHER PTHR30040:SF3 13 316 1.0E-88 T 19-04-2016 ALIDE2_RS23130 b543cc20568f6162a46aef7244e4bda9 325 PANTHER PTHR30040 13 316 1.0E-88 T 19-04-2016 ALIDE2_RS23130 b543cc20568f6162a46aef7244e4bda9 325 SUPERFAMILY SSF143631 16 313 5.32E-86 T 19-04-2016 IPR003374 ApbE-like domain ALIDE2_RS02175 fd4193a5c22d124e8ccb9bc06f4c7c9b 217 PANTHER PTHR11374 1 215 1.7E-106 T 19-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 ALIDE2_RS02175 fd4193a5c22d124e8ccb9bc06f4c7c9b 217 PANTHER PTHR11374:SF18 1 215 1.7E-106 T 19-04-2016 ALIDE2_RS02175 fd4193a5c22d124e8ccb9bc06f4c7c9b 217 SUPERFAMILY SSF48179 1 69 5.44E-19 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS02175 fd4193a5c22d124e8ccb9bc06f4c7c9b 217 Gene3D G3DSA:3.40.50.720 6 212 2.1E-70 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS02175 fd4193a5c22d124e8ccb9bc06f4c7c9b 217 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 91 194 8.6E-30 T 19-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS02175 fd4193a5c22d124e8ccb9bc06f4c7c9b 217 PIRSF PIRSF500134 1 213 1.0E-80 T 19-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 ALIDE2_RS02175 fd4193a5c22d124e8ccb9bc06f4c7c9b 217 SUPERFAMILY SSF52413 77 206 1.7E-39 T 19-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS02175 fd4193a5c22d124e8ccb9bc06f4c7c9b 217 PIRSF PIRSF000124 1 210 1.4E-62 T 19-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 ALIDE2_RS02175 fd4193a5c22d124e8ccb9bc06f4c7c9b 217 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 1 67 3.2E-21 T 19-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS02175 fd4193a5c22d124e8ccb9bc06f4c7c9b 217 SMART SM00984 91 195 4.6E-48 T 19-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS15475 e8fe58a5e5668de51662616f4b0dd425 364 PANTHER PTHR21581:SF8 96 347 9.6E-83 T 19-04-2016 ALIDE2_RS15475 e8fe58a5e5668de51662616f4b0dd425 364 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 101 327 1.5E-56 T 19-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 ALIDE2_RS15475 e8fe58a5e5668de51662616f4b0dd425 364 Gene3D G3DSA:3.40.710.10 102 344 8.2E-65 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS15475 e8fe58a5e5668de51662616f4b0dd425 364 PANTHER PTHR21581 96 347 9.6E-83 T 19-04-2016 ALIDE2_RS15475 e8fe58a5e5668de51662616f4b0dd425 364 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 185 202 3.4E-12 T 19-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ALIDE2_RS15475 e8fe58a5e5668de51662616f4b0dd425 364 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 135 146 3.4E-12 T 19-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ALIDE2_RS15475 e8fe58a5e5668de51662616f4b0dd425 364 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 212 225 3.4E-12 T 19-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ALIDE2_RS15475 e8fe58a5e5668de51662616f4b0dd425 364 SUPERFAMILY SSF56601 107 344 3.24E-58 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS00325 64b0c9b563d3f38819f8bcebc3acec07 301 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 295 - T 19-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS00325 64b0c9b563d3f38819f8bcebc3acec07 301 Gene3D G3DSA:2.60.120.10 44 122 1.2E-12 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS00325 64b0c9b563d3f38819f8bcebc3acec07 301 Gene3D G3DSA:1.10.10.60 258 298 4.5E-8 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS00325 64b0c9b563d3f38819f8bcebc3acec07 301 SUPERFAMILY SSF51182 38 233 1.67E-19 T 19-04-2016 IPR011051 RmlC-like cupin domain ALIDE2_RS00325 64b0c9b563d3f38819f8bcebc3acec07 301 Pfam PF02311 AraC-like ligand binding domain 59 159 8.5E-10 T 19-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 ALIDE2_RS00325 64b0c9b563d3f38819f8bcebc3acec07 301 PANTHER PTHR11019:SF99 45 300 2.7E-59 T 19-04-2016 ALIDE2_RS00325 64b0c9b563d3f38819f8bcebc3acec07 301 SMART SM00342 217 299 1.1E-15 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS00325 64b0c9b563d3f38819f8bcebc3acec07 301 Gene3D G3DSA:1.10.10.60 198 253 4.4E-9 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS00325 64b0c9b563d3f38819f8bcebc3acec07 301 Pfam PF12833 Helix-turn-helix domain 223 299 8.1E-19 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS00325 64b0c9b563d3f38819f8bcebc3acec07 301 SUPERFAMILY SSF46689 260 298 9.86E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS00325 64b0c9b563d3f38819f8bcebc3acec07 301 PANTHER PTHR11019 45 300 2.7E-59 T 19-04-2016 ALIDE2_RS24090 822a4c641f96d2fe8bbea1a7c3a1a6f0 122 Pfam PF01863 Protein of unknown function DUF45 5 116 5.8E-38 T 19-04-2016 IPR002725 Protein of unknown function DUF45 ALIDE2_RS24090 822a4c641f96d2fe8bbea1a7c3a1a6f0 122 PANTHER PTHR30399 8 120 1.4E-28 T 19-04-2016 ALIDE2_RS23210 d91f379defade7fa92d3ffb7dba766ab 328 PANTHER PTHR30349:SF32 9 312 1.9E-80 T 19-04-2016 ALIDE2_RS23210 d91f379defade7fa92d3ffb7dba766ab 328 PANTHER PTHR30349 9 312 1.9E-80 T 19-04-2016 ALIDE2_RS23210 d91f379defade7fa92d3ffb7dba766ab 328 PIRSF PIRSF017082 2 326 6.3E-72 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS23210 d91f379defade7fa92d3ffb7dba766ab 328 SUPERFAMILY SSF53850 117 291 2.35E-12 T 19-04-2016 ALIDE2_RS23210 d91f379defade7fa92d3ffb7dba766ab 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 323 6.2E-79 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS20375 ff97233fa3b46d4e4669f895054d0a6f 410 Gene3D G3DSA:3.30.1540.10 230 313 6.7E-30 T 19-04-2016 ALIDE2_RS20375 ff97233fa3b46d4e4669f895054d0a6f 410 PANTHER PTHR24023:SF593 51 392 7.6E-33 T 19-04-2016 ALIDE2_RS20375 ff97233fa3b46d4e4669f895054d0a6f 410 SUPERFAMILY SSF89796 12 405 1.31E-131 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS20375 ff97233fa3b46d4e4669f895054d0a6f 410 Pfam PF02515 CoA-transferase family III 13 380 1.4E-124 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS20375 ff97233fa3b46d4e4669f895054d0a6f 410 PANTHER PTHR24023 51 392 7.6E-33 T 19-04-2016 ALIDE2_RS20375 ff97233fa3b46d4e4669f895054d0a6f 410 Gene3D G3DSA:3.40.50.10540 314 405 3.7E-110 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS20375 ff97233fa3b46d4e4669f895054d0a6f 410 Gene3D G3DSA:3.40.50.10540 11 224 3.7E-110 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS09795 0ef409487f19d388d283d32135b4a9b4 105 SMART SM00966 8 53 1.5E-9 T 19-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 ALIDE2_RS09795 0ef409487f19d388d283d32135b4a9b4 105 Pfam PF15937 prlF antitoxin for toxin YhaV_toxin 8 75 3.0E-16 T 19-04-2016 IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 ALIDE2_RS09795 0ef409487f19d388d283d32135b4a9b4 105 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 8 70 1.0E-8 T 19-04-2016 ALIDE2_RS09795 0ef409487f19d388d283d32135b4a9b4 105 Gene3D G3DSA:2.10.260.10 6 47 3.2E-8 T 19-04-2016 ALIDE2_RS09795 0ef409487f19d388d283d32135b4a9b4 105 SUPERFAMILY SSF89447 3 49 7.85E-11 T 19-04-2016 ALIDE2_RS09795 0ef409487f19d388d283d32135b4a9b4 105 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 9 48 7.2E-10 T 19-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 ALIDE2_RS10395 cc131fc894865d9ca149780893878b76 418 PANTHER PTHR11360 8 410 6.4E-72 T 19-04-2016 ALIDE2_RS10395 cc131fc894865d9ca149780893878b76 418 Gene3D G3DSA:1.20.1250.20 11 194 7.7E-19 T 19-04-2016 ALIDE2_RS10395 cc131fc894865d9ca149780893878b76 418 PANTHER PTHR11360:SF115 8 410 6.4E-72 T 19-04-2016 ALIDE2_RS10395 cc131fc894865d9ca149780893878b76 418 Gene3D G3DSA:1.20.1250.20 230 407 1.4E-21 T 19-04-2016 ALIDE2_RS10395 cc131fc894865d9ca149780893878b76 418 Pfam PF07690 Major Facilitator Superfamily 23 317 5.9E-32 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS10395 cc131fc894865d9ca149780893878b76 418 SUPERFAMILY SSF103473 4 409 3.01E-54 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS09010 3cbfcabbd61e38f5e87542ea51565515 164 PANTHER PTHR30471:SF5 27 164 2.2E-68 T 19-04-2016 ALIDE2_RS09010 3cbfcabbd61e38f5e87542ea51565515 164 SUPERFAMILY SSF102712 58 131 8.63E-5 T 19-04-2016 ALIDE2_RS09010 3cbfcabbd61e38f5e87542ea51565515 164 PANTHER PTHR30471 27 164 2.2E-68 T 19-04-2016 ALIDE2_RS09010 3cbfcabbd61e38f5e87542ea51565515 164 Gene3D G3DSA:3.40.140.10 41 164 1.8E-47 T 19-04-2016 ALIDE2_RS09010 3cbfcabbd61e38f5e87542ea51565515 164 Pfam PF04002 RadC-like JAB domain 44 162 8.1E-41 T 19-04-2016 IPR025657 RadC-like JAB domain ALIDE2_RS09010 3cbfcabbd61e38f5e87542ea51565515 164 TIGRFAM TIGR00608 radc: DNA repair protein RadC 28 164 2.4E-41 T 19-04-2016 IPR001405 RadC protein ALIDE2_RS12400 11d09b25b71d03d4d1e78ee112f36add 226 Gene3D G3DSA:3.40.50.2300 1 123 6.2E-34 T 19-04-2016 ALIDE2_RS12400 11d09b25b71d03d4d1e78ee112f36add 226 Pfam PF00072 Response regulator receiver domain 3 112 1.6E-23 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS12400 11d09b25b71d03d4d1e78ee112f36add 226 SMART SM00448 1 112 6.2E-32 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS12400 11d09b25b71d03d4d1e78ee112f36add 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 5.1E-19 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS12400 11d09b25b71d03d4d1e78ee112f36add 226 PANTHER PTHR26402:SF578 1 221 1.3E-66 T 19-04-2016 ALIDE2_RS12400 11d09b25b71d03d4d1e78ee112f36add 226 SUPERFAMILY SSF52172 1 166 3.66E-34 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS12400 11d09b25b71d03d4d1e78ee112f36add 226 Gene3D G3DSA:1.10.10.10 124 219 2.4E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12400 11d09b25b71d03d4d1e78ee112f36add 226 SMART SM00862 145 218 9.7E-19 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS12400 11d09b25b71d03d4d1e78ee112f36add 226 PANTHER PTHR26402 1 221 1.3E-66 T 19-04-2016 ALIDE2_RS02935 2e27e28f86feb83e9ab9da5216ded53e 161 PANTHER PTHR30154 1 161 2.0E-52 T 19-04-2016 ALIDE2_RS02935 2e27e28f86feb83e9ab9da5216ded53e 161 PANTHER PTHR30154:SF28 1 161 2.0E-52 T 19-04-2016 ALIDE2_RS02935 2e27e28f86feb83e9ab9da5216ded53e 161 SUPERFAMILY SSF46785 6 87 3.15E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02935 2e27e28f86feb83e9ab9da5216ded53e 161 SMART SM00344 8 121 1.3E-30 T 19-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ALIDE2_RS02935 2e27e28f86feb83e9ab9da5216ded53e 161 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 9.4E-15 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS02935 2e27e28f86feb83e9ab9da5216ded53e 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.3E-13 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS02935 2e27e28f86feb83e9ab9da5216ded53e 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.3E-13 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS02935 2e27e28f86feb83e9ab9da5216ded53e 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.3E-13 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ALIDE2_RS02935 2e27e28f86feb83e9ab9da5216ded53e 161 SUPERFAMILY SSF54909 68 161 9.25E-22 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel ALIDE2_RS02935 2e27e28f86feb83e9ab9da5216ded53e 161 Gene3D G3DSA:1.10.10.10 6 59 6.8E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02935 2e27e28f86feb83e9ab9da5216ded53e 161 Gene3D G3DSA:3.30.70.920 62 149 1.4E-35 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ALIDE2_RS02935 2e27e28f86feb83e9ab9da5216ded53e 161 Pfam PF01037 Lrp/AsnC ligand binding domain 76 151 1.2E-24 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ALIDE2_RS18420 599369d01fa065d6f2a54d50484e5774 371 Gene3D G3DSA:1.10.540.10 1 116 2.8E-23 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS18420 599369d01fa065d6f2a54d50484e5774 371 Gene3D G3DSA:2.40.110.10 125 200 1.8E-6 T 19-04-2016 ALIDE2_RS18420 599369d01fa065d6f2a54d50484e5774 371 PANTHER PTHR10909 1 365 8.9E-61 T 19-04-2016 ALIDE2_RS18420 599369d01fa065d6f2a54d50484e5774 371 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 216 343 5.7E-20 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS18420 599369d01fa065d6f2a54d50484e5774 371 SUPERFAMILY SSF56645 1 201 5.1E-37 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS18420 599369d01fa065d6f2a54d50484e5774 371 SUPERFAMILY SSF47203 215 361 9.83E-32 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS18420 599369d01fa065d6f2a54d50484e5774 371 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 1.9E-20 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS18420 599369d01fa065d6f2a54d50484e5774 371 PANTHER PTHR10909:SF341 1 365 8.9E-61 T 19-04-2016 ALIDE2_RS18420 599369d01fa065d6f2a54d50484e5774 371 Gene3D G3DSA:1.20.140.10 217 355 2.8E-28 T 19-04-2016 ALIDE2_RS04050 cbe57540364dbb56e8abf1f4f16c8c13 259 PANTHER PTHR24220 12 259 6.8E-130 T 19-04-2016 ALIDE2_RS04050 cbe57540364dbb56e8abf1f4f16c8c13 259 Pfam PF00005 ABC transporter 26 184 6.8E-35 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS04050 cbe57540364dbb56e8abf1f4f16c8c13 259 SMART SM00382 35 232 6.2E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS04050 cbe57540364dbb56e8abf1f4f16c8c13 259 PIRSF PIRSF039085 7 259 6.4E-114 T 19-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ALIDE2_RS04050 cbe57540364dbb56e8abf1f4f16c8c13 259 PANTHER PTHR24220:SF327 12 259 6.8E-130 T 19-04-2016 ALIDE2_RS04050 cbe57540364dbb56e8abf1f4f16c8c13 259 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS04050 cbe57540364dbb56e8abf1f4f16c8c13 259 Gene3D G3DSA:3.40.50.300 9 256 1.9E-82 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04050 cbe57540364dbb56e8abf1f4f16c8c13 259 SUPERFAMILY SSF52540 10 254 6.46E-77 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10230 921db943a62f2df85c15c2ede55b5884 474 PANTHER PTHR30408 11 457 2.3E-54 T 19-04-2016 ALIDE2_RS10230 921db943a62f2df85c15c2ede55b5884 474 SUPERFAMILY SSF116734 6 217 2.62E-26 T 19-04-2016 ALIDE2_RS10230 921db943a62f2df85c15c2ede55b5884 474 Pfam PF01420 Type I restriction modification DNA specificity domain 234 402 1.4E-4 T 19-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 ALIDE2_RS10230 921db943a62f2df85c15c2ede55b5884 474 SUPERFAMILY SSF116734 220 445 4.09E-37 T 19-04-2016 ALIDE2_RS10230 921db943a62f2df85c15c2ede55b5884 474 PANTHER PTHR30408:SF6 11 457 2.3E-54 T 19-04-2016 ALIDE2_RS10655 dac209f14df61c7adf4f73c8ee4f256b 196 PANTHER PTHR33867:SF1 53 112 2.0E-14 T 19-04-2016 ALIDE2_RS10655 dac209f14df61c7adf4f73c8ee4f256b 196 SUPERFAMILY SSF75420 3 87 2.62E-10 T 19-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal ALIDE2_RS10655 dac209f14df61c7adf4f73c8ee4f256b 196 Pfam PF02576 Putative ribosome maturation factor RimP 6 135 1.2E-21 T 19-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 ALIDE2_RS10655 dac209f14df61c7adf4f73c8ee4f256b 196 PANTHER PTHR33867 53 112 2.0E-14 T 19-04-2016 ALIDE2_RS10655 dac209f14df61c7adf4f73c8ee4f256b 196 Gene3D G3DSA:3.30.300.70 3 84 3.4E-11 T 19-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal ALIDE2_RS10655 dac209f14df61c7adf4f73c8ee4f256b 196 PANTHER PTHR33867 2 34 2.0E-14 T 19-04-2016 ALIDE2_RS10655 dac209f14df61c7adf4f73c8ee4f256b 196 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 183 20.432 T 19-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 ALIDE2_RS10655 dac209f14df61c7adf4f73c8ee4f256b 196 PANTHER PTHR33867:SF1 2 34 2.0E-14 T 19-04-2016 ALIDE2_RS13005 23b07538ce51a483c66a3f96574fdb86 448 PANTHER PTHR30602 9 448 2.5E-156 T 19-04-2016 ALIDE2_RS13005 23b07538ce51a483c66a3f96574fdb86 448 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 9 448 2.5E-180 T 19-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 ALIDE2_RS13005 23b07538ce51a483c66a3f96574fdb86 448 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 448 218.348 T 19-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 ALIDE2_RS13005 23b07538ce51a483c66a3f96574fdb86 448 SUPERFAMILY SSF53633 5 299 2.23E-61 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS13005 23b07538ce51a483c66a3f96574fdb86 448 Gene3D G3DSA:3.40.1160.10 25 297 2.8E-57 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS13005 23b07538ce51a483c66a3f96574fdb86 448 Pfam PF00696 Amino acid kinase family 27 274 1.8E-25 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS13005 23b07538ce51a483c66a3f96574fdb86 448 SUPERFAMILY SSF55729 303 425 1.45E-18 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS13005 23b07538ce51a483c66a3f96574fdb86 448 PIRSF PIRSF000423 2 448 7.7E-178 T 19-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 ALIDE2_RS13005 23b07538ce51a483c66a3f96574fdb86 448 Gene3D G3DSA:3.40.630.30 303 447 2.4E-35 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS13005 23b07538ce51a483c66a3f96574fdb86 448 Pfam PF00583 Acetyltransferase (GNAT) family 347 419 1.9E-7 T 19-04-2016 IPR000182 GNAT domain GO:0008080 ALIDE2_RS22740 1f46f234c871d29cf70cc96b5eccc80b 380 PANTHER PTHR30469:SF15 15 369 6.6E-76 T 19-04-2016 ALIDE2_RS22740 1f46f234c871d29cf70cc96b5eccc80b 380 PANTHER PTHR30469 15 369 6.6E-76 T 19-04-2016 ALIDE2_RS22740 1f46f234c871d29cf70cc96b5eccc80b 380 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 51 278 1.4E-16 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS22740 1f46f234c871d29cf70cc96b5eccc80b 380 SUPERFAMILY SSF111369 57 279 4.32E-24 T 19-04-2016 ALIDE2_RS22740 1f46f234c871d29cf70cc96b5eccc80b 380 Gene3D G3DSA:2.40.50.100 175 207 1.8E-10 T 19-04-2016 ALIDE2_RS22740 1f46f234c871d29cf70cc96b5eccc80b 380 Gene3D G3DSA:2.40.50.100 66 100 1.8E-10 T 19-04-2016 ALIDE2_RS22740 1f46f234c871d29cf70cc96b5eccc80b 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 357 9.5E-64 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ALIDE2_RS00250 b73389712dfa1b17bfc0b3133258a22d 241 PANTHER PTHR26402:SF518 1 234 1.6E-63 T 19-04-2016 ALIDE2_RS00250 b73389712dfa1b17bfc0b3133258a22d 241 Pfam PF00072 Response regulator receiver domain 3 124 1.1E-18 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS00250 b73389712dfa1b17bfc0b3133258a22d 241 SUPERFAMILY SSF52172 1 138 3.56E-31 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS00250 b73389712dfa1b17bfc0b3133258a22d 241 PANTHER PTHR26402 1 234 1.6E-63 T 19-04-2016 ALIDE2_RS00250 b73389712dfa1b17bfc0b3133258a22d 241 SMART SM00862 156 229 4.6E-17 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS00250 b73389712dfa1b17bfc0b3133258a22d 241 Gene3D G3DSA:3.40.50.2300 1 136 1.6E-35 T 19-04-2016 ALIDE2_RS00250 b73389712dfa1b17bfc0b3133258a22d 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 229 5.0E-16 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS00250 b73389712dfa1b17bfc0b3133258a22d 241 SMART SM00448 1 124 3.6E-29 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS00250 b73389712dfa1b17bfc0b3133258a22d 241 SUPERFAMILY SSF46894 130 230 1.67E-21 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS00250 b73389712dfa1b17bfc0b3133258a22d 241 Gene3D G3DSA:1.10.10.10 137 231 4.5E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS18210 f70474426041a5460504c9bfd2c1a11b 487 SUPERFAMILY SSF55785 59 166 1.35E-7 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS18210 f70474426041a5460504c9bfd2c1a11b 487 PANTHER PTHR10799:SF660 344 475 3.4E-12 T 19-04-2016 ALIDE2_RS18210 f70474426041a5460504c9bfd2c1a11b 487 Gene3D G3DSA:3.30.70.270 330 475 2.1E-36 T 19-04-2016 ALIDE2_RS18210 f70474426041a5460504c9bfd2c1a11b 487 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 324 475 1.2E-27 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS18210 f70474426041a5460504c9bfd2c1a11b 487 Gene3D G3DSA:3.30.450.20 224 315 1.0E-11 T 19-04-2016 ALIDE2_RS18210 f70474426041a5460504c9bfd2c1a11b 487 Gene3D G3DSA:3.30.450.20 156 189 1.0E-11 T 19-04-2016 ALIDE2_RS18210 f70474426041a5460504c9bfd2c1a11b 487 Pfam PF00990 Diguanylate cyclase, GGDEF domain 329 474 1.2E-31 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS18210 f70474426041a5460504c9bfd2c1a11b 487 SUPERFAMILY SSF55785 222 324 4.89E-10 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS18210 f70474426041a5460504c9bfd2c1a11b 487 Pfam PF13188 PAS domain 11 99 0.13 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS18210 f70474426041a5460504c9bfd2c1a11b 487 Pfam PF13188 PAS domain 169 269 2.4E-8 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS18210 f70474426041a5460504c9bfd2c1a11b 487 SMART SM00267 317 479 8.7E-33 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS18210 f70474426041a5460504c9bfd2c1a11b 487 Gene3D G3DSA:3.30.450.20 64 155 3.2E-7 T 19-04-2016 ALIDE2_RS18210 f70474426041a5460504c9bfd2c1a11b 487 Gene3D G3DSA:3.30.450.20 7 29 3.2E-7 T 19-04-2016 ALIDE2_RS18210 f70474426041a5460504c9bfd2c1a11b 487 SUPERFAMILY SSF55073 333 475 2.28E-32 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS18210 f70474426041a5460504c9bfd2c1a11b 487 PANTHER PTHR10799 344 475 3.4E-12 T 19-04-2016 ALIDE2_RS01335 ef9dde68b6acf9c2c3c9ad397314d0c5 103 Pfam PF06099 Phenol hydroxylase subunit 18 69 2.0E-22 T 19-04-2016 IPR010353 Phenol hydroxylase subunit KEGG: 00361+1.14.13.7|KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|UniPathway: UPA00728 ALIDE2_RS01335 ef9dde68b6acf9c2c3c9ad397314d0c5 103 ProDom PD468738 PHENOL HYDROXYLASE COMPONENT SUBUNIT PHENOLHYDROXYLASE MONOOXYGENASE TOMA0 P0 HYDROCARBONS IRON 19 63 2.0E-9 T 19-04-2016 IPR010353 Phenol hydroxylase subunit KEGG: 00361+1.14.13.7|KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|UniPathway: UPA00728 ALIDE2_RS14245 8e7cb21ba0af57d86f486f9235e9650c 634 Gene3D G3DSA:3.40.50.980 59 246 1.1E-35 T 19-04-2016 ALIDE2_RS14245 8e7cb21ba0af57d86f486f9235e9650c 634 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 7 631 0.0 T 19-04-2016 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747|UniPathway: UPA00946 ALIDE2_RS14245 8e7cb21ba0af57d86f486f9235e9650c 634 PANTHER PTHR24095:SF165 8 631 0.0 T 19-04-2016 ALIDE2_RS14245 8e7cb21ba0af57d86f486f9235e9650c 634 Pfam PF00501 AMP-binding enzyme 72 507 1.2E-81 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS14245 8e7cb21ba0af57d86f486f9235e9650c 634 PANTHER PTHR24095 8 631 0.0 T 19-04-2016 ALIDE2_RS14245 8e7cb21ba0af57d86f486f9235e9650c 634 Gene3D G3DSA:3.30.300.30 502 616 7.0E-27 T 19-04-2016 ALIDE2_RS14245 8e7cb21ba0af57d86f486f9235e9650c 634 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 8 62 3.2E-20 T 19-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 ALIDE2_RS14245 8e7cb21ba0af57d86f486f9235e9650c 634 SUPERFAMILY SSF56801 7 634 9.94E-162 T 19-04-2016 ALIDE2_RS14245 8e7cb21ba0af57d86f486f9235e9650c 634 Pfam PF13193 AMP-binding enzyme C-terminal domain 516 599 8.8E-23 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS14245 8e7cb21ba0af57d86f486f9235e9650c 634 Gene3D G3DSA:3.40.50.980 247 397 7.6E-29 T 19-04-2016 ALIDE2_RS14245 8e7cb21ba0af57d86f486f9235e9650c 634 Gene3D G3DSA:2.30.38.10 418 501 1.4E-5 T 19-04-2016 ALIDE2_RS21410 1d92225c9b7f167d5e1c8b404ad46cc0 579 PANTHER PTHR11632:SF59 498 569 1.8E-64 T 19-04-2016 ALIDE2_RS21410 1d92225c9b7f167d5e1c8b404ad46cc0 579 PANTHER PTHR11632:SF59 48 478 1.8E-64 T 19-04-2016 ALIDE2_RS21410 1d92225c9b7f167d5e1c8b404ad46cc0 579 PANTHER PTHR11632 498 569 1.8E-64 T 19-04-2016 ALIDE2_RS21410 1d92225c9b7f167d5e1c8b404ad46cc0 579 PANTHER PTHR11632 48 478 1.8E-64 T 19-04-2016 ALIDE2_RS21410 1d92225c9b7f167d5e1c8b404ad46cc0 579 Pfam PF00890 FAD binding domain 51 558 1.1E-50 T 19-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain ALIDE2_RS21410 1d92225c9b7f167d5e1c8b404ad46cc0 579 SUPERFAMILY SSF51905 47 317 7.63E-34 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS21410 1d92225c9b7f167d5e1c8b404ad46cc0 579 SUPERFAMILY SSF51905 511 576 7.63E-34 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS21410 1d92225c9b7f167d5e1c8b404ad46cc0 579 Gene3D G3DSA:3.90.700.10 329 506 6.3E-22 T 19-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain ALIDE2_RS21410 1d92225c9b7f167d5e1c8b404ad46cc0 579 Gene3D G3DSA:3.50.50.60 40 309 1.6E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS21410 1d92225c9b7f167d5e1c8b404ad46cc0 579 Gene3D G3DSA:3.50.50.60 513 573 1.6E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS21410 1d92225c9b7f167d5e1c8b404ad46cc0 579 SUPERFAMILY SSF56425 332 516 1.26E-13 T 19-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain ALIDE2_RS18270 1800266938142774db3e8e7cb3c921aa 255 PIRSF PIRSF000386 1 253 7.9E-84 T 19-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ALIDE2_RS18270 1800266938142774db3e8e7cb3c921aa 255 PANTHER PTHR32125 1 235 5.6E-97 T 19-04-2016 ALIDE2_RS18270 1800266938142774db3e8e7cb3c921aa 255 Gene3D G3DSA:3.40.1280.10 1 164 1.5E-57 T 19-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ALIDE2_RS18270 1800266938142774db3e8e7cb3c921aa 255 PANTHER PTHR32125:SF1 1 235 5.6E-97 T 19-04-2016 ALIDE2_RS18270 1800266938142774db3e8e7cb3c921aa 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 236 2.3E-77 T 19-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ALIDE2_RS18270 1800266938142774db3e8e7cb3c921aa 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 24 228 4.0E-51 T 19-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ALIDE2_RS18270 1800266938142774db3e8e7cb3c921aa 255 SUPERFAMILY SSF75217 1 239 1.24E-86 T 19-04-2016 IPR029028 Alpha/beta knot methyltransferases ALIDE2_RS18270 1800266938142774db3e8e7cb3c921aa 255 Gene3D G3DSA:1.10.1270.20 166 250 3.2E-28 T 19-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ALIDE2_RS18270 1800266938142774db3e8e7cb3c921aa 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 99.041 T 19-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ALIDE2_RS08515 7178635e24627e80b76f5da603341475 477 PANTHER PTHR11271:SF4 32 476 3.1E-148 T 19-04-2016 IPR010252 Formiminoglutamate deiminase ALIDE2_RS08515 7178635e24627e80b76f5da603341475 477 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 22 473 1.0E-177 T 19-04-2016 IPR010252 Formiminoglutamate deiminase ALIDE2_RS08515 7178635e24627e80b76f5da603341475 477 PANTHER PTHR11271 32 476 3.1E-148 T 19-04-2016 ALIDE2_RS08515 7178635e24627e80b76f5da603341475 477 SUPERFAMILY SSF51556 69 396 5.21E-72 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS08515 7178635e24627e80b76f5da603341475 477 Gene3D G3DSA:3.20.20.140 73 417 3.3E-73 T 19-04-2016 ALIDE2_RS08515 7178635e24627e80b76f5da603341475 477 Pfam PF01979 Amidohydrolase family 67 449 3.2E-33 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 Gene3D G3DSA:3.30.70.20 5 57 1.9E-10 T 19-04-2016 ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 435 3.0E-28 T 19-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 Gene3D G3DSA:1.10.3650.10 359 434 3.5E-27 T 19-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 489 4.9E-294 T 19-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 Pfam PF13247 4Fe-4S dicluster domain 175 271 3.5E-38 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 SUPERFAMILY SSF54862 1 494 1.88E-178 T 19-04-2016 ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 PANTHER PTHR11938 1 31 2.1E-131 T 19-04-2016 ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 PANTHER PTHR11938 170 336 2.1E-131 T 19-04-2016 ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 PANTHER PTHR11938 134 143 2.1E-131 T 19-04-2016 ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 Gene3D G3DSA:3.30.70.20 436 465 2.9E-75 T 19-04-2016 ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 Gene3D G3DSA:3.30.70.20 236 358 2.9E-75 T 19-04-2016 ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 PANTHER PTHR11938:SF8 1 31 2.1E-131 T 19-04-2016 ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 PANTHER PTHR11938:SF8 170 336 2.1E-131 T 19-04-2016 ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 PANTHER PTHR11938:SF8 134 143 2.1E-131 T 19-04-2016 ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 Gene3D G3DSA:3.30.70.20 153 195 4.4E-11 T 19-04-2016 ALIDE2_RS02330 62556c2c34d92c8e6ca929b87c9ce8c7 507 Gene3D G3DSA:3.30.70.20 196 235 1.5E-24 T 19-04-2016 ALIDE2_RS13750 b990831be44bc5643011e55a45eda52d 246 Pfam PF14460 Prokaryotic E2 family D 63 231 1.2E-51 T 19-04-2016 IPR032787 Prokaryotic E2 family D ALIDE2_RS13750 b990831be44bc5643011e55a45eda52d 246 TIGRFAM TIGR03737 PRTRC_B: PRTRC system protein B 17 243 8.0E-79 T 19-04-2016 IPR022280 ParB-related, ThiF-related cassette, protein B ALIDE2_RS06490 0b2e8ec0ee86550ade0168cd29197163 238 SUPERFAMILY SSF51366 9 228 4.39E-47 T 19-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 ALIDE2_RS06490 0b2e8ec0ee86550ade0168cd29197163 238 PANTHER PTHR22854:SF6 8 228 6.0E-48 T 19-04-2016 ALIDE2_RS06490 0b2e8ec0ee86550ade0168cd29197163 238 Gene3D G3DSA:3.20.20.70 8 229 2.1E-57 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS06490 0b2e8ec0ee86550ade0168cd29197163 238 PANTHER PTHR22854 8 228 6.0E-48 T 19-04-2016 ALIDE2_RS06490 0b2e8ec0ee86550ade0168cd29197163 238 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 9 230 35.697 T 19-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 ALIDE2_RS06490 0b2e8ec0ee86550ade0168cd29197163 238 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 11 225 5.0E-35 T 19-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 ALIDE2_RS20820 375b87636cf17c7229ed16aafe0caae2 334 Gene3D G3DSA:2.30.330.10 248 321 1.2E-9 T 19-04-2016 ALIDE2_RS20820 375b87636cf17c7229ed16aafe0caae2 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 9.0E-24 T 19-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ALIDE2_RS20820 375b87636cf17c7229ed16aafe0caae2 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 9.0E-24 T 19-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ALIDE2_RS20820 375b87636cf17c7229ed16aafe0caae2 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 9.0E-24 T 19-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ALIDE2_RS20820 375b87636cf17c7229ed16aafe0caae2 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 9.0E-24 T 19-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ALIDE2_RS20820 375b87636cf17c7229ed16aafe0caae2 334 SUPERFAMILY SSF101801 249 322 5.36E-13 T 19-04-2016 IPR001543 Surface presentation of antigen (SpoA) ALIDE2_RS20820 375b87636cf17c7229ed16aafe0caae2 334 PIRSF PIRSF002888 2 327 4.1E-90 T 19-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ALIDE2_RS20820 375b87636cf17c7229ed16aafe0caae2 334 SUPERFAMILY SSF103039 54 230 9.94E-21 T 19-04-2016 IPR028976 CheC-like domain ALIDE2_RS20820 375b87636cf17c7229ed16aafe0caae2 334 SUPERFAMILY SSF103039 5 14 9.94E-21 T 19-04-2016 IPR028976 CheC-like domain ALIDE2_RS20820 375b87636cf17c7229ed16aafe0caae2 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 318 7.7E-100 T 19-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ALIDE2_RS20820 375b87636cf17c7229ed16aafe0caae2 334 PANTHER PTHR30034:SF0 2 318 1.2E-122 T 19-04-2016 ALIDE2_RS20820 375b87636cf17c7229ed16aafe0caae2 334 PANTHER PTHR30034 2 318 1.2E-122 T 19-04-2016 ALIDE2_RS20820 375b87636cf17c7229ed16aafe0caae2 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 252 319 3.3E-18 T 19-04-2016 IPR001543 Surface presentation of antigen (SpoA) ALIDE2_RS20820 375b87636cf17c7229ed16aafe0caae2 334 Pfam PF02154 Flagellar motor switch protein FliM 38 230 1.3E-66 T 19-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ALIDE2_RS06145 a31f4599420e0d19eb083051933b7008 699 Gene3D G3DSA:3.40.50.720 9 140 4.9E-32 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS06145 a31f4599420e0d19eb083051933b7008 699 PANTHER PTHR33303 15 696 3.4E-121 T 19-04-2016 ALIDE2_RS06145 a31f4599420e0d19eb083051933b7008 699 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 165 300 1.6E-36 T 19-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain ALIDE2_RS06145 a31f4599420e0d19eb083051933b7008 699 Pfam PF13549 ATP-grasp domain 483 694 3.7E-45 T 19-04-2016 ALIDE2_RS06145 a31f4599420e0d19eb083051933b7008 699 SUPERFAMILY SSF52210 315 465 6.28E-21 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS06145 a31f4599420e0d19eb083051933b7008 699 SUPERFAMILY SSF52210 142 302 1.7E-28 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS06145 a31f4599420e0d19eb083051933b7008 699 SMART SM00881 15 110 6.8E-26 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS06145 a31f4599420e0d19eb083051933b7008 699 PANTHER PTHR33303:SF3 15 696 3.4E-121 T 19-04-2016 ALIDE2_RS06145 a31f4599420e0d19eb083051933b7008 699 SUPERFAMILY SSF51735 9 149 1.87E-30 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS06145 a31f4599420e0d19eb083051933b7008 699 Gene3D G3DSA:3.40.50.261 141 298 3.3E-18 T 19-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 ALIDE2_RS06145 a31f4599420e0d19eb083051933b7008 699 Pfam PF13380 CoA binding domain 19 146 1.9E-21 T 19-04-2016 IPR003781 CoA-binding GO:0048037 ALIDE2_RS06145 a31f4599420e0d19eb083051933b7008 699 SUPERFAMILY SSF56059 484 695 7.06E-25 T 19-04-2016 ALIDE2_RS06270 ae683c6bc9b4cb84b1f430a19d0d3e19 199 Pfam PF02545 Maf-like protein 11 193 2.0E-43 T 19-04-2016 IPR003697 Maf-like protein GO:0005737 ALIDE2_RS06270 ae683c6bc9b4cb84b1f430a19d0d3e19 199 PANTHER PTHR11746:SF102 129 195 2.3E-24 T 19-04-2016 ALIDE2_RS06270 ae683c6bc9b4cb84b1f430a19d0d3e19 199 PANTHER PTHR11746 129 195 2.3E-24 T 19-04-2016 ALIDE2_RS06270 ae683c6bc9b4cb84b1f430a19d0d3e19 199 SUPERFAMILY SSF52972 10 192 9.81E-56 T 19-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like ALIDE2_RS06270 ae683c6bc9b4cb84b1f430a19d0d3e19 199 TIGRFAM TIGR00172 maf: septum formation protein Maf 9 192 8.2E-47 T 19-04-2016 IPR003697 Maf-like protein GO:0005737 ALIDE2_RS06270 ae683c6bc9b4cb84b1f430a19d0d3e19 199 Gene3D G3DSA:3.90.950.10 10 196 1.4E-54 T 19-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like ALIDE2_RS06270 ae683c6bc9b4cb84b1f430a19d0d3e19 199 PIRSF PIRSF006305 5 198 2.9E-41 T 19-04-2016 IPR003697 Maf-like protein GO:0005737 ALIDE2_RS06270 ae683c6bc9b4cb84b1f430a19d0d3e19 199 Hamap MF_00528 Septum formation protein Maf [maf]. 10 198 28.671 T 19-04-2016 IPR003697 Maf-like protein GO:0005737 ALIDE2_RS14925 9897acb103b2dcf9c868d8adeb58adbc 487 Gene3D G3DSA:3.40.50.620 2 152 3.5E-44 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS14925 9897acb103b2dcf9c868d8adeb58adbc 487 PANTHER PTHR11455:SF18 1 485 9.4E-183 T 19-04-2016 ALIDE2_RS14925 9897acb103b2dcf9c868d8adeb58adbc 487 Pfam PF00875 DNA photolyase 5 172 1.8E-47 T 19-04-2016 IPR006050 DNA photolyase, N-terminal ALIDE2_RS14925 9897acb103b2dcf9c868d8adeb58adbc 487 PRINTS PR00147 DNA photolyase signature 388 402 3.7E-29 T 19-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 ALIDE2_RS14925 9897acb103b2dcf9c868d8adeb58adbc 487 PRINTS PR00147 DNA photolyase signature 149 165 3.7E-29 T 19-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 ALIDE2_RS14925 9897acb103b2dcf9c868d8adeb58adbc 487 PRINTS PR00147 DNA photolyase signature 349 367 3.7E-29 T 19-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 ALIDE2_RS14925 9897acb103b2dcf9c868d8adeb58adbc 487 PRINTS PR00147 DNA photolyase signature 329 345 3.7E-29 T 19-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 ALIDE2_RS14925 9897acb103b2dcf9c868d8adeb58adbc 487 Gene3D G3DSA:1.10.579.10 289 479 1.0E-75 T 19-04-2016 ALIDE2_RS14925 9897acb103b2dcf9c868d8adeb58adbc 487 PANTHER PTHR11455 1 485 9.4E-183 T 19-04-2016 ALIDE2_RS14925 9897acb103b2dcf9c868d8adeb58adbc 487 Gene3D G3DSA:1.25.40.80 212 288 8.0E-34 T 19-04-2016 ALIDE2_RS14925 9897acb103b2dcf9c868d8adeb58adbc 487 Gene3D G3DSA:1.25.40.80 153 168 8.0E-34 T 19-04-2016 ALIDE2_RS14925 9897acb103b2dcf9c868d8adeb58adbc 487 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 349 368 - T 19-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal ALIDE2_RS14925 9897acb103b2dcf9c868d8adeb58adbc 487 SUPERFAMILY SSF48173 200 481 2.09E-105 T 19-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain ALIDE2_RS14925 9897acb103b2dcf9c868d8adeb58adbc 487 Pfam PF03441 FAD binding domain of DNA photolyase 280 478 2.6E-81 T 19-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain ALIDE2_RS14925 9897acb103b2dcf9c868d8adeb58adbc 487 SUPERFAMILY SSF52425 4 189 1.96E-49 T 19-04-2016 IPR006050 DNA photolyase, N-terminal ALIDE2_RS04505 36ec1cdf8085faa754adfa9fde16cd79 297 SUPERFAMILY SSF46785 1 83 2.85E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS04505 36ec1cdf8085faa754adfa9fde16cd79 297 PANTHER PTHR30537:SF26 1 295 5.2E-81 T 19-04-2016 ALIDE2_RS04505 36ec1cdf8085faa754adfa9fde16cd79 297 Pfam PF03466 LysR substrate binding domain 94 293 5.3E-30 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS04505 36ec1cdf8085faa754adfa9fde16cd79 297 PANTHER PTHR30537 1 295 5.2E-81 T 19-04-2016 ALIDE2_RS04505 36ec1cdf8085faa754adfa9fde16cd79 297 Gene3D G3DSA:1.10.10.10 1 85 1.1E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS04505 36ec1cdf8085faa754adfa9fde16cd79 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.8E-11 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS04505 36ec1cdf8085faa754adfa9fde16cd79 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.8E-11 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS04505 36ec1cdf8085faa754adfa9fde16cd79 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.8E-11 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS04505 36ec1cdf8085faa754adfa9fde16cd79 297 Gene3D G3DSA:3.40.190.10 179 256 1.2E-20 T 19-04-2016 ALIDE2_RS04505 36ec1cdf8085faa754adfa9fde16cd79 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.9E-21 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS04505 36ec1cdf8085faa754adfa9fde16cd79 297 Gene3D G3DSA:3.40.190.10 95 178 1.3E-23 T 19-04-2016 ALIDE2_RS04505 36ec1cdf8085faa754adfa9fde16cd79 297 SUPERFAMILY SSF53850 94 294 7.06E-33 T 19-04-2016 ALIDE2_RS08500 9ff6030e03635371844ca80bcdf5ccbc 260 SUPERFAMILY SSF52540 13 252 5.44E-75 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08500 9ff6030e03635371844ca80bcdf5ccbc 260 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS08500 9ff6030e03635371844ca80bcdf5ccbc 260 SMART SM00382 38 230 1.5E-13 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS08500 9ff6030e03635371844ca80bcdf5ccbc 260 Gene3D G3DSA:3.40.50.300 12 255 7.6E-83 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08500 9ff6030e03635371844ca80bcdf5ccbc 260 PIRSF PIRSF039085 10 258 7.2E-110 T 19-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ALIDE2_RS08500 9ff6030e03635371844ca80bcdf5ccbc 260 Pfam PF00005 ABC transporter 29 182 1.4E-34 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS08500 9ff6030e03635371844ca80bcdf5ccbc 260 PANTHER PTHR24220:SF447 15 259 2.7E-127 T 19-04-2016 ALIDE2_RS08500 9ff6030e03635371844ca80bcdf5ccbc 260 PANTHER PTHR24220 15 259 2.7E-127 T 19-04-2016 ALIDE2_RS11020 2eb3655c05f993be1f37ade4c96dd38a 263 Pfam PF07702 UTRA domain 123 256 2.5E-32 T 19-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ALIDE2_RS11020 2eb3655c05f993be1f37ade4c96dd38a 263 SMART SM00345 33 92 5.5E-22 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS11020 2eb3655c05f993be1f37ade4c96dd38a 263 SUPERFAMILY SSF64288 81 262 5.34E-38 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ALIDE2_RS11020 2eb3655c05f993be1f37ade4c96dd38a 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 92 6.0E-21 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS11020 2eb3655c05f993be1f37ade4c96dd38a 263 SUPERFAMILY SSF46785 27 96 3.48E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11020 2eb3655c05f993be1f37ade4c96dd38a 263 SMART SM00866 115 257 3.5E-29 T 19-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ALIDE2_RS11020 2eb3655c05f993be1f37ade4c96dd38a 263 PANTHER PTHR11751 143 167 6.0E-23 T 19-04-2016 ALIDE2_RS11020 2eb3655c05f993be1f37ade4c96dd38a 263 PANTHER PTHR11751 28 94 6.0E-23 T 19-04-2016 ALIDE2_RS11020 2eb3655c05f993be1f37ade4c96dd38a 263 Gene3D G3DSA:3.40.1410.10 90 262 1.3E-43 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ALIDE2_RS11020 2eb3655c05f993be1f37ade4c96dd38a 263 Gene3D G3DSA:1.10.10.10 28 89 8.6E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11020 2eb3655c05f993be1f37ade4c96dd38a 263 PANTHER PTHR11751:SF292 143 167 6.0E-23 T 19-04-2016 ALIDE2_RS11020 2eb3655c05f993be1f37ade4c96dd38a 263 PANTHER PTHR11751:SF292 28 94 6.0E-23 T 19-04-2016 ALIDE2_RS11020 2eb3655c05f993be1f37ade4c96dd38a 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 66 1.3E-6 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS11020 2eb3655c05f993be1f37ade4c96dd38a 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 66 82 1.3E-6 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS13745 53e039cfd30fe82bc11639705b16d32a 235 Gene3D G3DSA:3.40.140.10 86 161 2.5E-4 T 19-04-2016 ALIDE2_RS13745 53e039cfd30fe82bc11639705b16d32a 235 SUPERFAMILY SSF102712 83 165 1.44E-5 T 19-04-2016 ALIDE2_RS13745 53e039cfd30fe82bc11639705b16d32a 235 TIGRFAM TIGR03735 PRTRC_A: PRTRC system protein A 8 194 5.7E-61 T 19-04-2016 IPR022499 ParB-related, ThiF-related cassette, protein A ALIDE2_RS13745 53e039cfd30fe82bc11639705b16d32a 235 Pfam PF09436 Domain of unknown function (DUF2016) 7 77 3.4E-25 T 19-04-2016 IPR018560 Domain of unknown function DUF2016 ALIDE2_RS13745 53e039cfd30fe82bc11639705b16d32a 235 Pfam PF14464 Prokaryotic homologs of the JAB domain 84 170 4.2E-13 T 19-04-2016 IPR028090 JAB domain, prokaryotic ALIDE2_RS11960 0b33da86e08f30b39732347ac812beec 172 PANTHER PTHR14021:SF15 8 171 1.4E-38 T 19-04-2016 ALIDE2_RS11960 0b33da86e08f30b39732347ac812beec 172 Pfam PF07743 HSCB C-terminal oligomerisation domain 91 164 6.2E-18 T 19-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 ALIDE2_RS11960 0b33da86e08f30b39732347ac812beec 172 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 5 171 20.196 T 19-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 ALIDE2_RS11960 0b33da86e08f30b39732347ac812beec 172 PANTHER PTHR14021 8 171 1.4E-38 T 19-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 ALIDE2_RS11960 0b33da86e08f30b39732347ac812beec 172 Gene3D G3DSA:1.10.287.110 4 76 2.4E-23 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS11960 0b33da86e08f30b39732347ac812beec 172 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 21 168 5.3E-28 T 19-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 ALIDE2_RS11960 0b33da86e08f30b39732347ac812beec 172 SMART SM00271 5 70 4.7E-4 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS11960 0b33da86e08f30b39732347ac812beec 172 SUPERFAMILY SSF46565 6 79 1.44E-16 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS11960 0b33da86e08f30b39732347ac812beec 172 Gene3D G3DSA:1.20.1280.20 85 170 9.0E-24 T 19-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 ALIDE2_RS11960 0b33da86e08f30b39732347ac812beec 172 SUPERFAMILY SSF47144 83 170 4.58E-18 T 19-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 ALIDE2_RS04475 d8b4549191d55c9ff8512001530ac1e5 335 SUPERFAMILY SSF52540 88 326 2.55E-28 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04475 d8b4549191d55c9ff8512001530ac1e5 335 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 109 246 2.2E-13 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS04475 d8b4549191d55c9ff8512001530ac1e5 335 SMART SM00382 105 252 4.0E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS04475 d8b4549191d55c9ff8512001530ac1e5 335 PANTHER PTHR10046 113 261 4.8E-19 T 19-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 ALIDE2_RS04475 d8b4549191d55c9ff8512001530ac1e5 335 Gene3D G3DSA:3.40.50.300 105 264 6.7E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04475 d8b4549191d55c9ff8512001530ac1e5 335 PANTHER PTHR10046:SF47 113 261 4.8E-19 T 19-04-2016 ALIDE2_RS05560 8fba8fbc7fa86ee192e02089071b7b14 340 PIRSF PIRSF017082 8 340 3.4E-78 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS05560 8fba8fbc7fa86ee192e02089071b7b14 340 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 64 335 5.5E-79 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS05560 8fba8fbc7fa86ee192e02089071b7b14 340 SUPERFAMILY SSF53850 104 302 1.78E-13 T 19-04-2016 ALIDE2_RS05560 8fba8fbc7fa86ee192e02089071b7b14 340 PANTHER PTHR30349 1 292 2.4E-83 T 19-04-2016 ALIDE2_RS05560 8fba8fbc7fa86ee192e02089071b7b14 340 PANTHER PTHR30349:SF16 1 292 2.4E-83 T 19-04-2016 ALIDE2_RS07905 cb0ab6aeb7eda93834853ebccfbdd3e2 406 SUPERFAMILY SSF51905 277 382 3.98E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07905 cb0ab6aeb7eda93834853ebccfbdd3e2 406 SUPERFAMILY SSF51905 12 177 3.98E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07905 cb0ab6aeb7eda93834853ebccfbdd3e2 406 Gene3D G3DSA:3.50.50.60 278 353 1.6E-27 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07905 cb0ab6aeb7eda93834853ebccfbdd3e2 406 Gene3D G3DSA:3.50.50.60 12 183 1.6E-27 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07905 cb0ab6aeb7eda93834853ebccfbdd3e2 406 PANTHER PTHR13789 1 378 1.1E-69 T 19-04-2016 ALIDE2_RS07905 cb0ab6aeb7eda93834853ebccfbdd3e2 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 2.919028E-10 T 19-04-2016 ALIDE2_RS07905 cb0ab6aeb7eda93834853ebccfbdd3e2 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 305 321 2.919028E-10 T 19-04-2016 ALIDE2_RS07905 cb0ab6aeb7eda93834853ebccfbdd3e2 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 305 2.919028E-10 T 19-04-2016 ALIDE2_RS07905 cb0ab6aeb7eda93834853ebccfbdd3e2 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 11 33 2.919028E-10 T 19-04-2016 ALIDE2_RS07905 cb0ab6aeb7eda93834853ebccfbdd3e2 406 Pfam PF01494 FAD binding domain 12 327 8.1E-13 T 19-04-2016 IPR002938 FAD-binding domain GO:0071949 ALIDE2_RS07905 cb0ab6aeb7eda93834853ebccfbdd3e2 406 PANTHER PTHR13789:SF251 1 378 1.1E-69 T 19-04-2016 ALIDE2_RS09585 2e61825bb0bb8e4c0371df0b52aef663 144 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 12 140 3.2E-53 T 19-04-2016 IPR022262 Lipoprotein, putative ALIDE2_RS22610 9ced5eef337bcef2b5a15dd24cfa2948 345 SUPERFAMILY SSF53850 29 335 1.75E-69 T 19-04-2016 ALIDE2_RS22610 9ced5eef337bcef2b5a15dd24cfa2948 345 PIRSF PIRSF002825 5 339 1.2E-91 T 19-04-2016 IPR026045 Ferric binding protein ALIDE2_RS22610 9ced5eef337bcef2b5a15dd24cfa2948 345 Gene3D G3DSA:3.40.190.10 133 270 4.7E-43 T 19-04-2016 ALIDE2_RS22610 9ced5eef337bcef2b5a15dd24cfa2948 345 PANTHER PTHR30006 33 345 6.8E-125 T 19-04-2016 ALIDE2_RS22610 9ced5eef337bcef2b5a15dd24cfa2948 345 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 15 343 6.7E-161 T 19-04-2016 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative ALIDE2_RS22610 9ced5eef337bcef2b5a15dd24cfa2948 345 Pfam PF13343 Bacterial extracellular solute-binding protein 80 310 1.2E-29 T 19-04-2016 ALIDE2_RS22610 9ced5eef337bcef2b5a15dd24cfa2948 345 PANTHER PTHR30006:SF9 33 345 6.8E-125 T 19-04-2016 ALIDE2_RS22610 9ced5eef337bcef2b5a15dd24cfa2948 345 Gene3D G3DSA:3.40.190.10 271 330 3.2E-46 T 19-04-2016 ALIDE2_RS22610 9ced5eef337bcef2b5a15dd24cfa2948 345 Gene3D G3DSA:3.40.190.10 8 130 3.2E-46 T 19-04-2016 ALIDE2_RS01225 25989b57e74fcb2dc9e937e856ed9a68 348 Pfam PF00535 Glycosyl transferase family 2 10 146 2.1E-28 T 19-04-2016 IPR001173 Glycosyltransferase 2-like ALIDE2_RS01225 25989b57e74fcb2dc9e937e856ed9a68 348 Gene3D G3DSA:3.90.550.10 9 236 1.0E-38 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS01225 25989b57e74fcb2dc9e937e856ed9a68 348 SUPERFAMILY SSF53448 7 239 1.22E-42 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS01225 25989b57e74fcb2dc9e937e856ed9a68 348 PANTHER PTHR22916 169 234 4.0E-38 T 19-04-2016 ALIDE2_RS01225 25989b57e74fcb2dc9e937e856ed9a68 348 PANTHER PTHR22916 5 153 4.0E-38 T 19-04-2016 ALIDE2_RS00640 e289ad55105f2289cf395e4b919dabf1 336 PANTHER PTHR30349 14 276 4.3E-69 T 19-04-2016 ALIDE2_RS00640 e289ad55105f2289cf395e4b919dabf1 336 SUPERFAMILY SSF53850 131 289 3.57E-8 T 19-04-2016 ALIDE2_RS00640 e289ad55105f2289cf395e4b919dabf1 336 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 332 5.1E-70 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00640 e289ad55105f2289cf395e4b919dabf1 336 PIRSF PIRSF017082 4 335 1.8E-72 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00640 e289ad55105f2289cf395e4b919dabf1 336 PANTHER PTHR30349:SF32 14 276 4.3E-69 T 19-04-2016 ALIDE2_RS15890 2a6b5e065691093562080f9c9115a253 291 SUPERFAMILY SSF56529 42 281 2.59E-36 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS15890 2a6b5e065691093562080f9c9115a253 291 PANTHER PTHR30143 72 291 4.2E-26 T 19-04-2016 ALIDE2_RS15890 2a6b5e065691093562080f9c9115a253 291 Gene3D G3DSA:3.90.850.10 38 281 1.7E-46 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS02405 6ad47df41044317c5f15c2314195958a 410 SUPERFAMILY SSF89796 7 402 3.01E-120 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS02405 6ad47df41044317c5f15c2314195958a 410 Gene3D G3DSA:3.30.1540.10 242 322 1.5E-27 T 19-04-2016 ALIDE2_RS02405 6ad47df41044317c5f15c2314195958a 410 PANTHER PTHR24023:SF593 67 400 3.8E-25 T 19-04-2016 ALIDE2_RS02405 6ad47df41044317c5f15c2314195958a 410 PANTHER PTHR24023:SF593 15 44 3.8E-25 T 19-04-2016 ALIDE2_RS02405 6ad47df41044317c5f15c2314195958a 410 PANTHER PTHR24023 67 400 3.8E-25 T 19-04-2016 ALIDE2_RS02405 6ad47df41044317c5f15c2314195958a 410 PANTHER PTHR24023 15 44 3.8E-25 T 19-04-2016 ALIDE2_RS02405 6ad47df41044317c5f15c2314195958a 410 Pfam PF02515 CoA-transferase family III 12 389 3.7E-123 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS02405 6ad47df41044317c5f15c2314195958a 410 Gene3D G3DSA:3.40.50.10540 10 234 4.1E-98 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS02405 6ad47df41044317c5f15c2314195958a 410 Gene3D G3DSA:3.40.50.10540 323 401 4.1E-98 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS15440 94f0217e1ed1487d6f075ad941cfae72 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS15440 94f0217e1ed1487d6f075ad941cfae72 259 PANTHER PTHR11941 11 258 2.8E-62 T 19-04-2016 ALIDE2_RS15440 94f0217e1ed1487d6f075ad941cfae72 259 SUPERFAMILY SSF52096 5 259 3.08E-64 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS15440 94f0217e1ed1487d6f075ad941cfae72 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 259 1.4E-50 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS15440 94f0217e1ed1487d6f075ad941cfae72 259 Gene3D G3DSA:3.90.226.10 4 259 4.1E-66 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS13705 456d7b34b24eb739ea120d1e26ce0a76 146 Gene3D G3DSA:3.10.129.10 35 132 4.7E-14 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS13705 456d7b34b24eb739ea120d1e26ce0a76 146 SUPERFAMILY SSF54637 10 137 3.21E-21 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS13705 456d7b34b24eb739ea120d1e26ce0a76 146 Pfam PF03061 Thioesterase superfamily 47 119 2.6E-7 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 455 3.9E-28 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 Gene3D G3DSA:3.50.50.60 7 145 9.2E-36 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PANTHER PTHR22912 1 458 4.3E-190 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 465 3.2E-140 T 19-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PIRSF PIRSF000350 1 459 1.0E-79 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 SUPERFAMILY SSF51905 3 337 5.98E-55 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 Gene3D G3DSA:3.30.390.30 334 464 3.3E-36 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 327 9.6E-67 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PANTHER PTHR22912:SF146 1 458 4.3E-190 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 5.2E-38 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.2E-38 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 5.2E-38 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 5.2E-38 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 141 159 5.2E-38 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 Gene3D G3DSA:3.50.50.60 146 333 1.1E-48 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 19-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 SUPERFAMILY SSF55424 345 463 3.44E-32 T 19-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 7.7E-68 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 7.7E-68 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 7.7E-68 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 7.7E-68 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 153 7.7E-68 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 7.7E-68 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 7.7E-68 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 7.7E-68 T 19-04-2016 ALIDE2_RS02965 17b4d04befc87a68538d92d79206b769 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 7.7E-68 T 19-04-2016 ALIDE2_RS02225 6612096ea048678c44848cfccd61a631 200 Gene3D G3DSA:3.40.50.10490 2 192 1.3E-41 T 19-04-2016 ALIDE2_RS02225 6612096ea048678c44848cfccd61a631 200 Pfam PF13580 SIS domain 16 146 2.4E-27 T 19-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 ALIDE2_RS02225 6612096ea048678c44848cfccd61a631 200 SUPERFAMILY SSF53697 2 191 1.25E-37 T 19-04-2016 ALIDE2_RS02225 6612096ea048678c44848cfccd61a631 200 PANTHER PTHR30390 2 197 3.2E-61 T 19-04-2016 ALIDE2_RS02225 6612096ea048678c44848cfccd61a631 200 PANTHER PTHR30390:SF5 2 197 3.2E-61 T 19-04-2016 ALIDE2_RS09205 2ce2a6253cdd91f45d0fc764bc910724 272 SUPERFAMILY SSF52096 1 261 3.89E-75 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS09205 2ce2a6253cdd91f45d0fc764bc910724 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 260 2.1E-46 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS09205 2ce2a6253cdd91f45d0fc764bc910724 272 Gene3D G3DSA:3.90.226.10 1 260 8.2E-72 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS09205 2ce2a6253cdd91f45d0fc764bc910724 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS09205 2ce2a6253cdd91f45d0fc764bc910724 272 PANTHER PTHR11941 2 260 4.7E-74 T 19-04-2016 ALIDE2_RS07345 484f1cffb8d53157794b2b4a31357905 294 PIRSF PIRSF015582 1 294 1.1E-80 T 19-04-2016 IPR011206 Citrate lyase beta subunit-like ALIDE2_RS07345 484f1cffb8d53157794b2b4a31357905 294 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 9 230 2.7E-33 T 19-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ALIDE2_RS07345 484f1cffb8d53157794b2b4a31357905 294 PANTHER PTHR32308 5 291 2.4E-62 T 19-04-2016 IPR011206 Citrate lyase beta subunit-like ALIDE2_RS07345 484f1cffb8d53157794b2b4a31357905 294 SUPERFAMILY SSF51621 5 241 2.97E-51 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS07345 484f1cffb8d53157794b2b4a31357905 294 Gene3D G3DSA:3.20.20.60 3 241 9.7E-61 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS22235 5492da8ef6c71501a5ad96f28eb5c8f4 332 PIRSF PIRSF004930 4 332 9.0E-97 T 19-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 ALIDE2_RS22235 5492da8ef6c71501a5ad96f28eb5c8f4 332 Pfam PF01300 Telomere recombination 17 197 8.1E-50 T 19-04-2016 IPR006070 YrdC-like domain GO:0003725 ALIDE2_RS22235 5492da8ef6c71501a5ad96f28eb5c8f4 332 Gene3D G3DSA:3.90.870.10 8 203 3.8E-72 T 19-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain ALIDE2_RS22235 5492da8ef6c71501a5ad96f28eb5c8f4 332 PANTHER PTHR17490 4 332 9.1E-77 T 19-04-2016 ALIDE2_RS22235 5492da8ef6c71501a5ad96f28eb5c8f4 332 SUPERFAMILY SSF55821 8 205 1.34E-57 T 19-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain ALIDE2_RS22235 5492da8ef6c71501a5ad96f28eb5c8f4 332 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 10 205 6.8E-48 T 19-04-2016 IPR006070 YrdC-like domain GO:0003725 ALIDE2_RS22235 5492da8ef6c71501a5ad96f28eb5c8f4 332 Pfam PF03481 Putative GTP-binding controlling metal-binding 219 330 2.2E-18 T 19-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain ALIDE2_RS22385 733d843e1a6dff60c2bd04e42c7ec790 293 Gene3D G3DSA:3.40.50.880 13 267 5.2E-48 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS22385 733d843e1a6dff60c2bd04e42c7ec790 293 Pfam PF07722 Peptidase C26 13 239 8.4E-52 T 19-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 ALIDE2_RS22385 733d843e1a6dff60c2bd04e42c7ec790 293 PANTHER PTHR11922 45 240 6.6E-39 T 19-04-2016 ALIDE2_RS22385 733d843e1a6dff60c2bd04e42c7ec790 293 SUPERFAMILY SSF52317 34 262 1.15E-35 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS22385 733d843e1a6dff60c2bd04e42c7ec790 293 PANTHER PTHR11922:SF18 45 240 6.6E-39 T 19-04-2016 ALIDE2_RS13040 fb009a66c0946f8941229b9d402f23e3 260 Pfam PF00005 ABC transporter 20 179 4.6E-29 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS13040 fb009a66c0946f8941229b9d402f23e3 260 Gene3D G3DSA:3.40.50.300 2 247 2.6E-69 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13040 fb009a66c0946f8941229b9d402f23e3 260 PANTHER PTHR24220:SF358 6 249 1.7E-81 T 19-04-2016 ALIDE2_RS13040 fb009a66c0946f8941229b9d402f23e3 260 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS13040 fb009a66c0946f8941229b9d402f23e3 260 SUPERFAMILY SSF52540 3 249 2.51E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13040 fb009a66c0946f8941229b9d402f23e3 260 SMART SM00382 29 227 3.7E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS13040 fb009a66c0946f8941229b9d402f23e3 260 PANTHER PTHR24220 6 249 1.7E-81 T 19-04-2016 ALIDE2_RS15920 2829d36b060b00d74137d9532aeb1cdb 400 Pfam PF02515 CoA-transferase family III 6 377 1.2E-126 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS15920 2829d36b060b00d74137d9532aeb1cdb 400 SUPERFAMILY SSF89796 4 400 9.03E-129 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS15920 2829d36b060b00d74137d9532aeb1cdb 400 Gene3D G3DSA:3.40.50.10540 308 400 1.9E-107 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS15920 2829d36b060b00d74137d9532aeb1cdb 400 Gene3D G3DSA:3.40.50.10540 2 219 1.9E-107 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS15920 2829d36b060b00d74137d9532aeb1cdb 400 PANTHER PTHR24023 44 387 3.1E-30 T 19-04-2016 ALIDE2_RS15920 2829d36b060b00d74137d9532aeb1cdb 400 Gene3D G3DSA:3.30.1540.10 225 307 7.0E-30 T 19-04-2016 ALIDE2_RS15920 2829d36b060b00d74137d9532aeb1cdb 400 PANTHER PTHR24023:SF593 44 387 3.1E-30 T 19-04-2016 ALIDE2_RS18540 9613d9a207a258f3b455660bd1c67190 174 SUPERFAMILY SSF52141 12 168 6.02E-34 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like ALIDE2_RS18540 9613d9a207a258f3b455660bd1c67190 174 Pfam PF03167 Uracil DNA glycosylase superfamily 16 166 3.5E-8 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like ALIDE2_RS18540 9613d9a207a258f3b455660bd1c67190 174 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 11 164 8.3E-45 T 19-04-2016 IPR026353 Hypoxanthine-DNA glycosylase ALIDE2_RS18540 9613d9a207a258f3b455660bd1c67190 174 Gene3D G3DSA:3.40.470.10 12 167 6.9E-34 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like ALIDE2_RS18540 9613d9a207a258f3b455660bd1c67190 174 SMART SM00986 13 168 8.0E-12 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like ALIDE2_RS18540 9613d9a207a258f3b455660bd1c67190 174 SMART SM00987 13 168 8.0E-12 T 19-04-2016 ALIDE2_RS09860 eb44188c46782d80150188aa260f872e 349 SMART SM00267 170 343 2.6E-57 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS09860 eb44188c46782d80150188aa260f872e 349 Gene3D G3DSA:3.30.70.270 183 345 1.0E-53 T 19-04-2016 ALIDE2_RS09860 eb44188c46782d80150188aa260f872e 349 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 342 5.0E-47 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS09860 eb44188c46782d80150188aa260f872e 349 PANTHER PTHR10799:SF710 66 341 3.0E-23 T 19-04-2016 ALIDE2_RS09860 eb44188c46782d80150188aa260f872e 349 SUPERFAMILY SSF55073 186 344 1.26E-46 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS09860 eb44188c46782d80150188aa260f872e 349 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 339 5.9E-44 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS09860 eb44188c46782d80150188aa260f872e 349 PANTHER PTHR10799 66 341 3.0E-23 T 19-04-2016 ALIDE2_RS04840 a3a3f60332e688eba1f1e20a01d5a86f 221 SUPERFAMILY SSF52172 1 176 8.54E-40 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS04840 a3a3f60332e688eba1f1e20a01d5a86f 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 5.5E-21 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS04840 a3a3f60332e688eba1f1e20a01d5a86f 221 PANTHER PTHR26402:SF316 1 220 5.6E-80 T 19-04-2016 ALIDE2_RS04840 a3a3f60332e688eba1f1e20a01d5a86f 221 Pfam PF00072 Response regulator receiver domain 3 112 5.2E-28 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS04840 a3a3f60332e688eba1f1e20a01d5a86f 221 SMART SM00862 145 220 1.4E-19 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS04840 a3a3f60332e688eba1f1e20a01d5a86f 221 PANTHER PTHR26402 1 220 5.6E-80 T 19-04-2016 ALIDE2_RS04840 a3a3f60332e688eba1f1e20a01d5a86f 221 SMART SM00448 1 112 1.4E-40 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS04840 a3a3f60332e688eba1f1e20a01d5a86f 221 Gene3D G3DSA:3.40.50.2300 1 121 1.7E-38 T 19-04-2016 ALIDE2_RS04840 a3a3f60332e688eba1f1e20a01d5a86f 221 Gene3D G3DSA:1.10.10.10 123 220 6.8E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22685 10bff9a9d2ab73ce1e5f5583df98450f 110 SMART SM01323 22 104 8.3E-44 T 19-04-2016 IPR003849 Preprotein translocase YajC ALIDE2_RS22685 10bff9a9d2ab73ce1e5f5583df98450f 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 24 104 1.9E-27 T 19-04-2016 IPR003849 Preprotein translocase YajC ALIDE2_RS22685 10bff9a9d2ab73ce1e5f5583df98450f 110 Pfam PF02699 Preprotein translocase subunit 27 102 9.6E-30 T 19-04-2016 IPR003849 Preprotein translocase YajC ALIDE2_RS22685 10bff9a9d2ab73ce1e5f5583df98450f 110 PANTHER PTHR33909 2 110 7.4E-31 T 19-04-2016 ALIDE2_RS22685 10bff9a9d2ab73ce1e5f5583df98450f 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 44 62 3.0E-14 T 19-04-2016 IPR003849 Preprotein translocase YajC ALIDE2_RS22685 10bff9a9d2ab73ce1e5f5583df98450f 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 24 44 3.0E-14 T 19-04-2016 IPR003849 Preprotein translocase YajC ALIDE2_RS22685 10bff9a9d2ab73ce1e5f5583df98450f 110 PANTHER PTHR33909:SF1 2 110 7.4E-31 T 19-04-2016 ALIDE2_RS11320 33708f04af87de8ad405fcd62984edf5 256 PANTHER PTHR11079 5 225 2.4E-54 T 19-04-2016 ALIDE2_RS11320 33708f04af87de8ad405fcd62984edf5 256 Pfam PF00849 RNA pseudouridylate synthase 17 171 1.1E-25 T 19-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS11320 33708f04af87de8ad405fcd62984edf5 256 PANTHER PTHR11079:SF60 5 225 2.4E-54 T 19-04-2016 ALIDE2_RS11320 33708f04af87de8ad405fcd62984edf5 256 SUPERFAMILY SSF55120 7 226 1.34E-51 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS11320 33708f04af87de8ad405fcd62984edf5 256 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 57 71 - T 19-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 178 193 - T 19-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 PANTHER PTHR30587:SF0 35 251 5.2E-116 T 19-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 226 238 - T 19-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 PANTHER PTHR30587 35 251 5.2E-116 T 19-04-2016 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 54 249 4.2E-85 T 19-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 Pfam PF00813 FliP family 54 245 2.5E-78 T 19-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 49 58 1.6E-26 T 19-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 149 161 1.6E-26 T 19-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 171 183 1.6E-26 T 19-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 239 249 1.6E-26 T 19-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 109 121 1.6E-26 T 19-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 121 135 1.6E-26 T 19-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 199 220 3.4E-65 T 19-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 223 248 3.4E-65 T 19-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 51 70 3.4E-65 T 19-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 178 198 3.4E-65 T 19-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 70 90 3.4E-65 T 19-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ALIDE2_RS20805 61f735c1fa95a970b7c075cd8549fedf 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 3.4E-65 T 19-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ALIDE2_RS19920 bb0ef032260135e5fa055d5783c768f4 170 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 27 148 1.1E-44 T 19-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 ALIDE2_RS19920 bb0ef032260135e5fa055d5783c768f4 170 PANTHER PTHR10849:SF20 12 170 7.9E-85 T 19-04-2016 ALIDE2_RS19920 bb0ef032260135e5fa055d5783c768f4 170 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 71 82 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS19920 bb0ef032260135e5fa055d5783c768f4 170 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 110 121 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS19920 bb0ef032260135e5fa055d5783c768f4 170 PANTHER PTHR10849 12 170 7.9E-85 T 19-04-2016 ALIDE2_RS19920 bb0ef032260135e5fa055d5783c768f4 170 SUPERFAMILY SSF54862 44 153 2.85E-25 T 19-04-2016 ALIDE2_RS19920 bb0ef032260135e5fa055d5783c768f4 170 Pfam PF12838 4Fe-4S dicluster domain 70 123 2.7E-11 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS19920 bb0ef032260135e5fa055d5783c768f4 170 Gene3D G3DSA:1.10.1060.10 23 136 5.9E-22 T 19-04-2016 ALIDE2_RS19920 bb0ef032260135e5fa055d5783c768f4 170 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 18 167 27.592 T 19-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 ALIDE2_RS16725 417575a1788d85030798c29b2a99d313 299 SUPERFAMILY SSF53271 5 156 7.24E-34 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS16725 417575a1788d85030798c29b2a99d313 299 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 6 295 1.8E-52 T 19-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 ALIDE2_RS16725 417575a1788d85030798c29b2a99d313 299 SMART SM01400 3 118 1.2E-33 T 19-04-2016 ALIDE2_RS16725 417575a1788d85030798c29b2a99d313 299 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 115 7.1E-18 T 19-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 ALIDE2_RS16725 417575a1788d85030798c29b2a99d313 299 SUPERFAMILY SSF53271 159 282 3.02E-22 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS16725 417575a1788d85030798c29b2a99d313 299 Pfam PF00156 Phosphoribosyl transferase domain 136 281 8.2E-12 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 ALIDE2_RS16725 417575a1788d85030798c29b2a99d313 299 PANTHER PTHR10210 4 278 1.9E-42 T 19-04-2016 ALIDE2_RS16725 417575a1788d85030798c29b2a99d313 299 PANTHER PTHR10210:SF32 4 278 1.9E-42 T 19-04-2016 ALIDE2_RS16725 417575a1788d85030798c29b2a99d313 299 Gene3D G3DSA:3.40.50.2020 159 278 1.5E-16 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS16725 417575a1788d85030798c29b2a99d313 299 Gene3D G3DSA:3.40.50.2020 4 158 1.9E-30 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 Pfam PF00106 short chain dehydrogenase 9 203 2.1E-44 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.4E-23 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.4E-23 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.4E-23 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.4E-23 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.4E-23 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 4.3E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 4.3E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 4.3E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 PANTHER PTHR24322:SF530 55 149 5.0E-57 T 19-04-2016 ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 PANTHER PTHR24322:SF530 165 196 5.0E-57 T 19-04-2016 ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 PANTHER PTHR24322:SF530 12 31 5.0E-57 T 19-04-2016 ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 SUPERFAMILY SSF51735 1 242 2.82E-66 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 Gene3D G3DSA:3.40.50.720 2 237 1.9E-65 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 204 1.6E-4 T 19-04-2016 ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 PANTHER PTHR24322 55 149 5.0E-57 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 PANTHER PTHR24322 165 196 5.0E-57 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS11260 97a47e869dc71f4dc8495088e69f5ed3 302 PANTHER PTHR24322 12 31 5.0E-57 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS23385 463fb2f2a04b049abd9dc1c3c8bd760e 194 Gene3D G3DSA:3.40.50.150 9 173 1.4E-26 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS23385 463fb2f2a04b049abd9dc1c3c8bd760e 194 Pfam PF07021 Methionine biosynthesis protein MetW 7 190 2.8E-65 T 19-04-2016 IPR010743 Methionine biosynthesis MetW ALIDE2_RS23385 463fb2f2a04b049abd9dc1c3c8bd760e 194 PANTHER PTHR10108:SF831 7 169 1.6E-40 T 19-04-2016 ALIDE2_RS23385 463fb2f2a04b049abd9dc1c3c8bd760e 194 PANTHER PTHR10108 7 169 1.6E-40 T 19-04-2016 ALIDE2_RS23385 463fb2f2a04b049abd9dc1c3c8bd760e 194 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 7 191 4.0E-71 T 19-04-2016 IPR010743 Methionine biosynthesis MetW ALIDE2_RS23385 463fb2f2a04b049abd9dc1c3c8bd760e 194 SUPERFAMILY SSF53335 8 170 1.84E-26 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS19205 82803ef18d94a6f3e86aa4b6cc525dd9 357 Pfam PF14870 Photosynthesis system II assembly factor YCF48 57 126 1.4E-8 T 19-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain ALIDE2_RS19205 82803ef18d94a6f3e86aa4b6cc525dd9 357 Pfam PF14870 Photosynthesis system II assembly factor YCF48 163 288 5.8E-11 T 19-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain ALIDE2_RS19205 82803ef18d94a6f3e86aa4b6cc525dd9 357 Gene3D G3DSA:2.130.10.10 44 327 6.9E-32 T 19-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ALIDE2_RS19205 82803ef18d94a6f3e86aa4b6cc525dd9 357 SUPERFAMILY SSF110296 48 126 1.78E-39 T 19-04-2016 ALIDE2_RS19205 82803ef18d94a6f3e86aa4b6cc525dd9 357 SUPERFAMILY SSF110296 166 329 1.78E-39 T 19-04-2016 ALIDE2_RS21295 8f428e8f6e0013756e1df51ca74d03cf 209 Gene3D G3DSA:3.40.50.2020 3 61 2.5E-36 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS21295 8f428e8f6e0013756e1df51ca74d03cf 209 Gene3D G3DSA:3.40.50.2020 94 204 2.5E-36 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS21295 8f428e8f6e0013756e1df51ca74d03cf 209 PANTHER PTHR31299 1 207 3.8E-63 T 19-04-2016 ALIDE2_RS21295 8f428e8f6e0013756e1df51ca74d03cf 209 SUPERFAMILY SSF53271 2 208 2.1E-47 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS21295 8f428e8f6e0013756e1df51ca74d03cf 209 Pfam PF00156 Phosphoribosyl transferase domain 8 195 4.6E-34 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 ALIDE2_RS08400 9c2b7127f1d96180cae5199528cbfd1c 360 PIRSF PIRSF015557 2 360 7.6E-99 T 19-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 ALIDE2_RS08400 9c2b7127f1d96180cae5199528cbfd1c 360 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 7 356 3.3E-122 T 19-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 ALIDE2_RS08400 9c2b7127f1d96180cae5199528cbfd1c 360 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 7 356 3.0E-127 T 19-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 ALIDE2_RS15820 2c10598dcfacc57d1a445dfdc5de17f1 226 SMART SM00248 123 155 0.12 T 19-04-2016 IPR002110 Ankyrin repeat GO:0005515 ALIDE2_RS15820 2c10598dcfacc57d1a445dfdc5de17f1 226 SMART SM00248 93 122 0.021 T 19-04-2016 IPR002110 Ankyrin repeat GO:0005515 ALIDE2_RS15820 2c10598dcfacc57d1a445dfdc5de17f1 226 SMART SM00248 59 89 2000.0 T 19-04-2016 IPR002110 Ankyrin repeat GO:0005515 ALIDE2_RS15820 2c10598dcfacc57d1a445dfdc5de17f1 226 SMART SM00248 159 188 0.0035 T 19-04-2016 IPR002110 Ankyrin repeat GO:0005515 ALIDE2_RS15820 2c10598dcfacc57d1a445dfdc5de17f1 226 Pfam PF12796 Ankyrin repeats (3 copies) 98 190 1.1E-17 T 19-04-2016 IPR020683 Ankyrin repeat-containing domain ALIDE2_RS15820 2c10598dcfacc57d1a445dfdc5de17f1 226 SUPERFAMILY SSF48403 33 212 5.39E-38 T 19-04-2016 IPR020683 Ankyrin repeat-containing domain ALIDE2_RS15820 2c10598dcfacc57d1a445dfdc5de17f1 226 Gene3D G3DSA:1.25.40.20 34 215 7.7E-42 T 19-04-2016 IPR020683 Ankyrin repeat-containing domain ALIDE2_RS15820 2c10598dcfacc57d1a445dfdc5de17f1 226 PANTHER PTHR24198 34 211 6.8E-36 T 19-04-2016 ALIDE2_RS08550 653c1493c8256b7b2ad7c5277280c3cf 329 PANTHER PTHR30349 1 279 3.5E-77 T 19-04-2016 ALIDE2_RS08550 653c1493c8256b7b2ad7c5277280c3cf 329 PIRSF PIRSF017082 1 325 1.9E-83 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS08550 653c1493c8256b7b2ad7c5277280c3cf 329 PANTHER PTHR30349:SF16 1 279 3.5E-77 T 19-04-2016 ALIDE2_RS08550 653c1493c8256b7b2ad7c5277280c3cf 329 SUPERFAMILY SSF53850 112 289 3.53E-13 T 19-04-2016 ALIDE2_RS08550 653c1493c8256b7b2ad7c5277280c3cf 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 322 2.7E-71 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS19175 9db5508cc7fb240d6ca66ad0405c1abc 326 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 142 163 - T 19-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 ALIDE2_RS19175 9db5508cc7fb240d6ca66ad0405c1abc 326 SUPERFAMILY SSF51735 114 265 2.8E-46 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS19175 9db5508cc7fb240d6ca66ad0405c1abc 326 PANTHER PTHR11695 16 326 1.8E-111 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS19175 9db5508cc7fb240d6ca66ad0405c1abc 326 Gene3D G3DSA:3.40.50.720 149 258 1.2E-31 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS19175 9db5508cc7fb240d6ca66ad0405c1abc 326 Gene3D G3DSA:3.90.180.10 3 148 1.1E-40 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS19175 9db5508cc7fb240d6ca66ad0405c1abc 326 Pfam PF00107 Zinc-binding dehydrogenase 153 258 8.4E-31 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ALIDE2_RS19175 9db5508cc7fb240d6ca66ad0405c1abc 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 91 1.7E-9 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ALIDE2_RS19175 9db5508cc7fb240d6ca66ad0405c1abc 326 PANTHER PTHR11695:SF605 16 326 1.8E-111 T 19-04-2016 ALIDE2_RS19175 9db5508cc7fb240d6ca66ad0405c1abc 326 SMART SM00829 11 324 5.5E-24 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ALIDE2_RS19175 9db5508cc7fb240d6ca66ad0405c1abc 326 SUPERFAMILY SSF50129 3 146 3.3E-34 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS12835 94c2b9f951c94319de8295443058d2de 403 PANTHER PTHR30572 1 403 7.5E-143 T 19-04-2016 ALIDE2_RS12835 94c2b9f951c94319de8295443058d2de 403 Pfam PF02687 FtsX-like permease family 284 396 9.6E-21 T 19-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 ALIDE2_RS12835 94c2b9f951c94319de8295443058d2de 403 PANTHER PTHR30572:SF9 1 403 7.5E-143 T 19-04-2016 ALIDE2_RS12835 94c2b9f951c94319de8295443058d2de 403 Pfam PF12704 MacB-like periplasmic core domain 21 242 6.9E-39 T 19-04-2016 IPR025857 MacB-like periplasmic core domain ALIDE2_RS06375 e6b6b2dfb540ab65d0a4828a61538258 130 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 129 1.5E-27 T 19-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 ALIDE2_RS06375 e6b6b2dfb540ab65d0a4828a61538258 130 SUPERFAMILY SSF56214 1 128 8.24E-29 T 19-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 ALIDE2_RS06375 e6b6b2dfb540ab65d0a4828a61538258 130 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 96 4.0E-39 T 19-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 ALIDE2_RS06375 e6b6b2dfb540ab65d0a4828a61538258 130 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 129 8.9E-23 T 19-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 ALIDE2_RS06375 e6b6b2dfb540ab65d0a4828a61538258 130 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 125 1.3E-21 T 19-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 ALIDE2_RS06375 e6b6b2dfb540ab65d0a4828a61538258 130 Gene3D G3DSA:3.90.470.20 1 129 5.0E-34 T 19-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 ALIDE2_RS06375 e6b6b2dfb540ab65d0a4828a61538258 130 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 129 23.43 T 19-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 ALIDE2_RS02930 15d845ca65e79fec6c2b5a6d5f76c27e 233 Gene3D G3DSA:3.40.630.30 31 163 3.3E-17 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS02930 15d845ca65e79fec6c2b5a6d5f76c27e 233 Pfam PF00583 Acetyltransferase (GNAT) family 91 163 2.0E-6 T 19-04-2016 IPR000182 GNAT domain GO:0008080 ALIDE2_RS02930 15d845ca65e79fec6c2b5a6d5f76c27e 233 SUPERFAMILY SSF55729 31 167 3.19E-16 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS01425 51bef5623e86153588bd73f42aa01bd4 212 SUPERFAMILY SSF56281 2 209 1.04E-55 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS01425 51bef5623e86153588bd73f42aa01bd4 212 PANTHER PTHR11935 1 209 2.4E-99 T 19-04-2016 ALIDE2_RS01425 51bef5623e86153588bd73f42aa01bd4 212 SMART SM00849 13 193 1.2E-36 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS01425 51bef5623e86153588bd73f42aa01bd4 212 Gene3D G3DSA:3.60.15.10 3 209 2.3E-59 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS01425 51bef5623e86153588bd73f42aa01bd4 212 Pfam PF00753 Metallo-beta-lactamase superfamily 10 183 5.8E-30 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS01425 51bef5623e86153588bd73f42aa01bd4 212 PANTHER PTHR11935:SF115 1 209 2.4E-99 T 19-04-2016 ALIDE2_RS21020 9b4c8799277c37601bce106dbc8d9ee2 479 Pfam PF00155 Aminotransferase class I and II 152 464 4.3E-30 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ALIDE2_RS21020 9b4c8799277c37601bce106dbc8d9ee2 479 SUPERFAMILY SSF46785 3 77 4.34E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS21020 9b4c8799277c37601bce106dbc8d9ee2 479 SMART SM00345 8 67 8.3E-14 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS21020 9b4c8799277c37601bce106dbc8d9ee2 479 PANTHER PTHR11751 103 479 1.6E-77 T 19-04-2016 ALIDE2_RS21020 9b4c8799277c37601bce106dbc8d9ee2 479 Gene3D G3DSA:1.10.10.10 4 68 1.5E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS21020 9b4c8799277c37601bce106dbc8d9ee2 479 PANTHER PTHR11751:SF386 103 479 1.6E-77 T 19-04-2016 ALIDE2_RS21020 9b4c8799277c37601bce106dbc8d9ee2 479 SUPERFAMILY SSF53383 135 465 7.15E-71 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS21020 9b4c8799277c37601bce106dbc8d9ee2 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 67 7.0E-13 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS21020 9b4c8799277c37601bce106dbc8d9ee2 479 Gene3D G3DSA:3.40.640.10 161 375 5.2E-59 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS22075 800ef67fd2b76a4fe9b5e60140e62ce2 339 PANTHER PTHR21621 16 337 6.6E-111 T 19-04-2016 ALIDE2_RS22075 800ef67fd2b76a4fe9b5e60140e62ce2 339 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 22 141 4.2E-46 T 19-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 ALIDE2_RS22075 800ef67fd2b76a4fe9b5e60140e62ce2 339 PANTHER PTHR21621:SF4 16 337 6.6E-111 T 19-04-2016 ALIDE2_RS22075 800ef67fd2b76a4fe9b5e60140e62ce2 339 Gene3D G3DSA:3.40.50.20 22 150 2.6E-52 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS22075 800ef67fd2b76a4fe9b5e60140e62ce2 339 Gene3D G3DSA:3.30.1490.20 158 212 4.4E-29 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ALIDE2_RS22075 800ef67fd2b76a4fe9b5e60140e62ce2 339 SUPERFAMILY SSF52440 22 143 1.7E-41 T 19-04-2016 IPR016185 Pre-ATP-grasp domain ALIDE2_RS22075 800ef67fd2b76a4fe9b5e60140e62ce2 339 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 145 318 3.1E-69 T 19-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 ALIDE2_RS22075 800ef67fd2b76a4fe9b5e60140e62ce2 339 Gene3D G3DSA:3.30.470.20 213 321 1.5E-43 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS22075 800ef67fd2b76a4fe9b5e60140e62ce2 339 Hamap MF_00162 Glutathione synthetase [gshB]. 1 337 153.523 T 19-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 ALIDE2_RS22075 800ef67fd2b76a4fe9b5e60140e62ce2 339 TIGRFAM TIGR01380 glut_syn: glutathione synthase 22 333 4.6E-121 T 19-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 ALIDE2_RS22075 800ef67fd2b76a4fe9b5e60140e62ce2 339 SUPERFAMILY SSF56059 145 331 1.87E-54 T 19-04-2016 ALIDE2_RS03660 6fd47918dea953fb7e33782c8c6b6bb4 223 Gene3D G3DSA:3.40.30.10 10 217 4.0E-49 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS03660 6fd47918dea953fb7e33782c8c6b6bb4 223 PANTHER PTHR13887:SF10 1 223 2.0E-46 T 19-04-2016 ALIDE2_RS03660 6fd47918dea953fb7e33782c8c6b6bb4 223 SUPERFAMILY SSF52833 8 221 7.91E-50 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS03660 6fd47918dea953fb7e33782c8c6b6bb4 223 Pfam PF01323 DSBA-like thioredoxin domain 11 215 2.6E-37 T 19-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 ALIDE2_RS03660 6fd47918dea953fb7e33782c8c6b6bb4 223 PANTHER PTHR13887 1 223 2.0E-46 T 19-04-2016 ALIDE2_RS01795 35f37bc9bc9e85009336eda756747cda 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 19-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS01795 35f37bc9bc9e85009336eda756747cda 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.887 T 19-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 ALIDE2_RS01795 35f37bc9bc9e85009336eda756747cda 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.2E-38 T 19-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 ALIDE2_RS01795 35f37bc9bc9e85009336eda756747cda 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.2E-38 T 19-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 ALIDE2_RS01795 35f37bc9bc9e85009336eda756747cda 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.2E-38 T 19-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 ALIDE2_RS01795 35f37bc9bc9e85009336eda756747cda 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.2E-38 T 19-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 ALIDE2_RS01795 35f37bc9bc9e85009336eda756747cda 138 Gene3D G3DSA:3.90.1170.10 22 135 4.0E-51 T 19-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01795 35f37bc9bc9e85009336eda756747cda 138 PANTHER PTHR12220 1 136 8.9E-69 T 19-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 ALIDE2_RS01795 35f37bc9bc9e85009336eda756747cda 138 SUPERFAMILY SSF54686 1 134 1.83E-52 T 19-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01795 35f37bc9bc9e85009336eda756747cda 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 8.9E-47 T 19-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS01795 35f37bc9bc9e85009336eda756747cda 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 6.3E-58 T 19-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 ALIDE2_RS02915 df90a2f7d228e3b23c4cc5a59718276e 168 Gene3D G3DSA:3.10.129.10 3 163 4.1E-55 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS02915 df90a2f7d228e3b23c4cc5a59718276e 168 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 165 4.7E-82 T 19-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 ALIDE2_RS02915 df90a2f7d228e3b23c4cc5a59718276e 168 Pfam PF07977 FabA-like domain 26 155 5.5E-49 T 19-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ALIDE2_RS02915 df90a2f7d228e3b23c4cc5a59718276e 168 SUPERFAMILY SSF54637 4 163 1.16E-50 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS22245 0cfb42e0403e873a7707701e0cb8fcf3 231 SUPERFAMILY SSF56925 23 231 1.26E-18 T 19-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ALIDE2_RS22245 0cfb42e0403e873a7707701e0cb8fcf3 231 PANTHER PTHR36920:SF1 1 231 2.1E-36 T 19-04-2016 ALIDE2_RS22245 0cfb42e0403e873a7707701e0cb8fcf3 231 Gene3D G3DSA:2.40.160.20 24 231 5.1E-48 T 19-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ALIDE2_RS22245 0cfb42e0403e873a7707701e0cb8fcf3 231 PANTHER PTHR36920 1 231 2.1E-36 T 19-04-2016 ALIDE2_RS22245 0cfb42e0403e873a7707701e0cb8fcf3 231 Pfam PF03922 OmpW family 23 231 1.1E-27 T 19-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 ALIDE2_RS13095 ec9536774a723bc0f7bc869230a210dc 333 Gene3D G3DSA:3.30.230.10 48 106 1.5E-4 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALIDE2_RS13095 ec9536774a723bc0f7bc869230a210dc 333 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 19 328 5.8E-116 T 19-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 ALIDE2_RS13095 ec9536774a723bc0f7bc869230a210dc 333 PANTHER PTHR30368:SF2 20 333 1.5E-136 T 19-04-2016 ALIDE2_RS13095 ec9536774a723bc0f7bc869230a210dc 333 PANTHER PTHR30368 20 333 1.5E-136 T 19-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 ALIDE2_RS13095 ec9536774a723bc0f7bc869230a210dc 333 Gene3D G3DSA:3.40.190.10 117 279 1.4E-65 T 19-04-2016 ALIDE2_RS13095 ec9536774a723bc0f7bc869230a210dc 333 SUPERFAMILY SSF53850 23 330 4.98E-76 T 19-04-2016 ALIDE2_RS13095 ec9536774a723bc0f7bc869230a210dc 333 Pfam PF13531 Bacterial extracellular solute-binding protein 45 279 8.7E-40 T 19-04-2016 ALIDE2_RS03010 612d748061dba2fa07aae17ae79e7c6a 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.2E-7 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS03010 612d748061dba2fa07aae17ae79e7c6a 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.2E-7 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS03010 612d748061dba2fa07aae17ae79e7c6a 225 Gene3D G3DSA:1.10.357.10 3 193 7.9E-25 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS03010 612d748061dba2fa07aae17ae79e7c6a 225 PANTHER PTHR30055 1 197 1.1E-30 T 19-04-2016 ALIDE2_RS03010 612d748061dba2fa07aae17ae79e7c6a 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 8.6E-10 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS03010 612d748061dba2fa07aae17ae79e7c6a 225 Pfam PF13972 Bacterial transcriptional repressor 62 209 2.3E-40 T 19-04-2016 IPR025722 Bacterial transcriptional repressor TetR ALIDE2_RS03010 612d748061dba2fa07aae17ae79e7c6a 225 PANTHER PTHR30055:SF30 1 197 1.1E-30 T 19-04-2016 ALIDE2_RS03010 612d748061dba2fa07aae17ae79e7c6a 225 SUPERFAMILY SSF46689 5 73 1.46E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS09660 58f776a0fd3f51e904f6b094b91b8a3d 600 SMART SM00382 377 567 8.0E-16 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS09660 58f776a0fd3f51e904f6b094b91b8a3d 600 Pfam PF00664 ABC transporter transmembrane region 34 303 2.4E-43 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ALIDE2_RS09660 58f776a0fd3f51e904f6b094b91b8a3d 600 Gene3D G3DSA:3.40.50.300 350 582 4.0E-68 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09660 58f776a0fd3f51e904f6b094b91b8a3d 600 SUPERFAMILY SSF52540 349 589 3.55E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09660 58f776a0fd3f51e904f6b094b91b8a3d 600 Gene3D G3DSA:1.20.1560.10 23 334 1.3E-80 T 19-04-2016 ALIDE2_RS09660 58f776a0fd3f51e904f6b094b91b8a3d 600 Pfam PF00005 ABC transporter 368 519 1.5E-28 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS09660 58f776a0fd3f51e904f6b094b91b8a3d 600 SUPERFAMILY SSF90123 23 336 9.03E-72 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ALIDE2_RS09660 58f776a0fd3f51e904f6b094b91b8a3d 600 PANTHER PTHR24221 23 600 1.7E-152 T 19-04-2016 ALIDE2_RS08730 571e71ceae0085e3b2c95b50c67398ac 127 SUPERFAMILY SSF50249 2 117 3.77E-25 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS08730 571e71ceae0085e3b2c95b50c67398ac 127 Pfam PF00436 Single-strand binding protein family 8 109 3.2E-13 T 19-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 ALIDE2_RS08730 571e71ceae0085e3b2c95b50c67398ac 127 Gene3D G3DSA:2.40.50.140 4 113 1.4E-22 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS08730 571e71ceae0085e3b2c95b50c67398ac 127 PIRSF PIRSF002070 1 126 5.3E-17 T 19-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 ALIDE2_RS10575 7c02019c7d1662954b30df472e0c7a1e 268 PANTHER PTHR10992 2 267 1.3E-35 T 19-04-2016 ALIDE2_RS10575 7c02019c7d1662954b30df472e0c7a1e 268 Gene3D G3DSA:3.40.50.1820 6 267 9.5E-47 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS10575 7c02019c7d1662954b30df472e0c7a1e 268 Pfam PF12697 Alpha/beta hydrolase family 26 259 6.8E-19 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS10575 7c02019c7d1662954b30df472e0c7a1e 268 SUPERFAMILY SSF53474 2 267 1.49E-47 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS10320 32694b0f0a1db795baa92424613312a8 117 SUPERFAMILY SSF109709 32 92 1.7E-7 T 19-04-2016 ALIDE2_RS11890 705b7edb30b471ba7da861a186128d0f 147 Pfam PF13490 Putative zinc-finger 7 36 1.2E-6 T 19-04-2016 IPR027383 Putative zinc-finger ALIDE2_RS20200 69425e1bc8b6eeb8e06f149181c85658 241 PANTHER PTHR26402 6 123 9.1E-21 T 19-04-2016 ALIDE2_RS20200 69425e1bc8b6eeb8e06f149181c85658 241 SMART SM00448 6 117 6.6E-17 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20200 69425e1bc8b6eeb8e06f149181c85658 241 Gene3D G3DSA:3.40.50.2300 6 124 1.2E-23 T 19-04-2016 ALIDE2_RS20200 69425e1bc8b6eeb8e06f149181c85658 241 Pfam PF01627 Hpt domain 160 223 1.1E-4 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS20200 69425e1bc8b6eeb8e06f149181c85658 241 SUPERFAMILY SSF52172 6 126 2.85E-26 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS20200 69425e1bc8b6eeb8e06f149181c85658 241 SUPERFAMILY SSF47226 103 230 4.06E-15 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS20200 69425e1bc8b6eeb8e06f149181c85658 241 Pfam PF00072 Response regulator receiver domain 8 117 7.5E-15 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20200 69425e1bc8b6eeb8e06f149181c85658 241 Gene3D G3DSA:1.20.120.160 129 230 6.6E-13 T 19-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ALIDE2_RS19825 a7d39e4d519d5162532e1b1d6e7fe4e0 67 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 60 16.227 T 19-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS19825 a7d39e4d519d5162532e1b1d6e7fe4e0 67 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 57 4.8E-18 T 19-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS19825 a7d39e4d519d5162532e1b1d6e7fe4e0 67 Gene3D G3DSA:3.90.940.10 1 63 4.4E-11 T 19-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS19825 a7d39e4d519d5162532e1b1d6e7fe4e0 67 Pfam PF01192 RNA polymerase Rpb6 8 57 3.7E-14 T 19-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS19825 a7d39e4d519d5162532e1b1d6e7fe4e0 67 PANTHER PTHR34476 2 62 2.0E-16 T 19-04-2016 ALIDE2_RS19825 a7d39e4d519d5162532e1b1d6e7fe4e0 67 SUPERFAMILY SSF63562 1 63 1.2E-19 T 19-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS19825 a7d39e4d519d5162532e1b1d6e7fe4e0 67 SMART SM01409 8 59 1.8E-14 T 19-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ALIDE2_RS13630 87f73cfd9af26d27740514d497056737 82 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 1.2E-30 T 19-04-2016 IPR021250 Protein of unknown function DUF2789 ALIDE2_RS12255 fddda7600bb145e49676113fe8de357c 328 SUPERFAMILY SSF53850 110 291 2.57E-9 T 19-04-2016 ALIDE2_RS12255 fddda7600bb145e49676113fe8de357c 328 PIRSF PIRSF017082 1 327 1.0E-76 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12255 fddda7600bb145e49676113fe8de357c 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 324 1.8E-73 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12255 fddda7600bb145e49676113fe8de357c 328 PANTHER PTHR30349:SF16 4 320 1.7E-71 T 19-04-2016 ALIDE2_RS12255 fddda7600bb145e49676113fe8de357c 328 PANTHER PTHR30349 4 320 1.7E-71 T 19-04-2016 ALIDE2_RS21035 06b256603e0aef1d2eb25e8a87eedb9d 393 Gene3D G3DSA:3.90.1150.10 271 390 1.9E-13 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS21035 06b256603e0aef1d2eb25e8a87eedb9d 393 PANTHER PTHR11751 13 390 2.0E-122 T 19-04-2016 ALIDE2_RS21035 06b256603e0aef1d2eb25e8a87eedb9d 393 Pfam PF00155 Aminotransferase class I and II 43 384 6.2E-35 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ALIDE2_RS21035 06b256603e0aef1d2eb25e8a87eedb9d 393 Gene3D G3DSA:3.40.640.10 57 270 1.9E-75 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS21035 06b256603e0aef1d2eb25e8a87eedb9d 393 PANTHER PTHR11751:SF294 13 390 2.0E-122 T 19-04-2016 ALIDE2_RS21035 06b256603e0aef1d2eb25e8a87eedb9d 393 SUPERFAMILY SSF53383 4 390 3.58E-104 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS16345 2d653498d0591ba561ce91c80e55205e 587 SUPERFAMILY SSF110849 13 138 2.62E-21 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS16345 2d653498d0591ba561ce91c80e55205e 587 Pfam PF02195 ParB-like nuclease domain 13 101 2.7E-18 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS16345 2d653498d0591ba561ce91c80e55205e 587 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 21 181 1.7E-30 T 19-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 ALIDE2_RS16345 2d653498d0591ba561ce91c80e55205e 587 SMART SM00470 10 102 9.3E-18 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS16345 2d653498d0591ba561ce91c80e55205e 587 TIGRFAM TIGR03734 PRTRC_parB: PRTRC system ParB family protein 17 558 2.9E-233 T 19-04-2016 IPR022396 ParB-related, ThiF-related cassette, ParB ALIDE2_RS16345 2d653498d0591ba561ce91c80e55205e 587 PANTHER PTHR33375 11 194 1.9E-42 T 19-04-2016 ALIDE2_RS16345 2d653498d0591ba561ce91c80e55205e 587 Gene3D G3DSA:3.90.1530.10 11 107 3.3E-27 T 19-04-2016 ALIDE2_RS06550 ce5bf9e6492d683525d0df1a3a79e339 194 Pfam PF02441 Flavoprotein 5 130 1.8E-27 T 19-04-2016 IPR003382 Flavoprotein GO:0003824 ALIDE2_RS06550 ce5bf9e6492d683525d0df1a3a79e339 194 Gene3D G3DSA:3.40.50.1950 5 189 8.9E-79 T 19-04-2016 IPR003382 Flavoprotein GO:0003824 ALIDE2_RS06550 ce5bf9e6492d683525d0df1a3a79e339 194 SUPERFAMILY SSF52507 5 189 1.57E-63 T 19-04-2016 IPR003382 Flavoprotein GO:0003824 ALIDE2_RS06550 ce5bf9e6492d683525d0df1a3a79e339 194 PANTHER PTHR30108:SF10 1 189 5.1E-85 T 19-04-2016 ALIDE2_RS06550 ce5bf9e6492d683525d0df1a3a79e339 194 PANTHER PTHR30108 1 189 5.1E-85 T 19-04-2016 ALIDE2_RS06550 ce5bf9e6492d683525d0df1a3a79e339 194 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 6 187 8.4E-73 T 19-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 ALIDE2_RS06550 ce5bf9e6492d683525d0df1a3a79e339 194 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 189 37.551 T 19-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 ALIDE2_RS11940 3a9d7aad804debb4835eafbb1c80e362 178 PANTHER PTHR33221 2 155 1.3E-57 T 19-04-2016 ALIDE2_RS11940 3a9d7aad804debb4835eafbb1c80e362 178 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 2.4E-44 T 19-04-2016 IPR000944 Transcription regulator Rrf2-type ALIDE2_RS11940 3a9d7aad804debb4835eafbb1c80e362 178 Gene3D G3DSA:1.10.10.10 1 136 7.3E-32 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11940 3a9d7aad804debb4835eafbb1c80e362 178 PANTHER PTHR33221:SF1 2 155 1.3E-57 T 19-04-2016 ALIDE2_RS11940 3a9d7aad804debb4835eafbb1c80e362 178 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 7.5E-64 T 19-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 ALIDE2_RS11940 3a9d7aad804debb4835eafbb1c80e362 178 SUPERFAMILY SSF46785 2 133 5.0E-37 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11940 3a9d7aad804debb4835eafbb1c80e362 178 Pfam PF02082 Transcriptional regulator 1 82 6.2E-28 T 19-04-2016 IPR000944 Transcription regulator Rrf2-type ALIDE2_RS23255 1dfd45612a8644f11c7b745ac9897ac3 107 Pfam PF00460 Flagella basal body rod protein 14 41 2.0E-5 T 19-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ALIDE2_RS23255 1dfd45612a8644f11c7b745ac9897ac3 107 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 48 103 3.2E-5 T 19-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ALIDE2_RS23430 63fdf0f2f24ed0ff6e08ea0f0b817e99 661 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 11 290 2.6E-72 T 19-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 ALIDE2_RS23430 63fdf0f2f24ed0ff6e08ea0f0b817e99 661 PANTHER PTHR16254 7 570 7.3E-171 T 19-04-2016 ALIDE2_RS23430 63fdf0f2f24ed0ff6e08ea0f0b817e99 661 SUPERFAMILY SSF51735 413 553 1.32E-33 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS23430 63fdf0f2f24ed0ff6e08ea0f0b817e99 661 Pfam PF02254 TrkA-N domain 416 529 5.2E-24 T 19-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ALIDE2_RS23430 63fdf0f2f24ed0ff6e08ea0f0b817e99 661 Gene3D G3DSA:3.40.50.720 412 544 4.5E-35 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS23430 63fdf0f2f24ed0ff6e08ea0f0b817e99 661 Pfam PF02080 TrkA-C domain 590 658 1.1E-8 T 19-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ALIDE2_RS23430 63fdf0f2f24ed0ff6e08ea0f0b817e99 661 SUPERFAMILY SSF116726 578 656 4.84E-9 T 19-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ALIDE2_RS23430 63fdf0f2f24ed0ff6e08ea0f0b817e99 661 Gene3D G3DSA:3.30.70.1450 586 657 1.1E-9 T 19-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ALIDE2_RS23430 63fdf0f2f24ed0ff6e08ea0f0b817e99 661 PANTHER PTHR16254:SF6 7 570 7.3E-171 T 19-04-2016 ALIDE2_RS23430 63fdf0f2f24ed0ff6e08ea0f0b817e99 661 Pfam PF00999 Sodium/hydrogen exchanger family 7 379 8.5E-65 T 19-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ALIDE2_RS00735 3bf14884992c8a60b83f1e0a274000d2 287 SUPERFAMILY SSF51621 9 232 1.22E-56 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS00735 3bf14884992c8a60b83f1e0a274000d2 287 Gene3D G3DSA:3.20.20.60 9 232 1.4E-64 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS00735 3bf14884992c8a60b83f1e0a274000d2 287 PIRSF PIRSF015582 1 287 2.9E-69 T 19-04-2016 IPR011206 Citrate lyase beta subunit-like ALIDE2_RS00735 3bf14884992c8a60b83f1e0a274000d2 287 PANTHER PTHR32308 10 278 9.1E-67 T 19-04-2016 IPR011206 Citrate lyase beta subunit-like ALIDE2_RS00735 3bf14884992c8a60b83f1e0a274000d2 287 PANTHER PTHR32308:SF0 10 278 9.1E-67 T 19-04-2016 ALIDE2_RS00735 3bf14884992c8a60b83f1e0a274000d2 287 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 11 222 9.5E-35 T 19-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ALIDE2_RS12690 547797ec8636669a76f8a316a9775e38 286 Gene3D G3DSA:3.40.50.1820 5 284 1.4E-78 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS12690 547797ec8636669a76f8a316a9775e38 286 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 284 4.8E-134 T 19-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 ALIDE2_RS12690 547797ec8636669a76f8a316a9775e38 286 PANTHER PTHR10061 4 286 9.3E-159 T 19-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 ALIDE2_RS12690 547797ec8636669a76f8a316a9775e38 286 SUPERFAMILY SSF53474 5 284 1.61E-81 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS12690 547797ec8636669a76f8a316a9775e38 286 Pfam PF00756 Putative esterase 25 278 2.4E-53 T 19-04-2016 IPR000801 Putative esterase ALIDE2_RS17680 6dde2812bb6fcf275dc10a1e8266ebff 306 PANTHER PTHR32196 8 305 1.6E-94 T 19-04-2016 ALIDE2_RS17680 6dde2812bb6fcf275dc10a1e8266ebff 306 PANTHER PTHR32196:SF33 8 305 1.6E-94 T 19-04-2016 ALIDE2_RS17680 6dde2812bb6fcf275dc10a1e8266ebff 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 279 1.1E-35 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16695 000b26b64491b1f4aad68a8eb7246c47 440 Gene3D G3DSA:1.20.1250.20 236 410 8.8E-9 T 19-04-2016 ALIDE2_RS16695 000b26b64491b1f4aad68a8eb7246c47 440 Gene3D G3DSA:1.20.1250.20 21 211 4.2E-26 T 19-04-2016 ALIDE2_RS16695 000b26b64491b1f4aad68a8eb7246c47 440 SUPERFAMILY SSF103473 20 413 3.53E-39 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS16695 000b26b64491b1f4aad68a8eb7246c47 440 PANTHER PTHR23504 7 413 7.7E-22 T 19-04-2016 ALIDE2_RS16695 000b26b64491b1f4aad68a8eb7246c47 440 PRINTS PR01035 Tetracycline resistance protein signature 155 177 2.4E-8 T 19-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ALIDE2_RS16695 000b26b64491b1f4aad68a8eb7246c47 440 PRINTS PR01035 Tetracycline resistance protein signature 330 350 2.4E-8 T 19-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ALIDE2_RS16695 000b26b64491b1f4aad68a8eb7246c47 440 PRINTS PR01035 Tetracycline resistance protein signature 32 48 2.4E-8 T 19-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ALIDE2_RS16695 000b26b64491b1f4aad68a8eb7246c47 440 Pfam PF07690 Major Facilitator Superfamily 27 216 2.7E-22 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS22785 b1d169c8c5be04e58469e61d9ef311a0 306 Pfam PF03466 LysR substrate binding domain 91 296 5.2E-37 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS22785 b1d169c8c5be04e58469e61d9ef311a0 306 SUPERFAMILY SSF46785 1 84 1.08E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22785 b1d169c8c5be04e58469e61d9ef311a0 306 PANTHER PTHR30346 1 301 5.1E-75 T 19-04-2016 ALIDE2_RS22785 b1d169c8c5be04e58469e61d9ef311a0 306 Gene3D G3DSA:3.40.190.10 179 268 6.1E-26 T 19-04-2016 ALIDE2_RS22785 b1d169c8c5be04e58469e61d9ef311a0 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.6E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22785 b1d169c8c5be04e58469e61d9ef311a0 306 PANTHER PTHR30346:SF0 1 301 5.1E-75 T 19-04-2016 ALIDE2_RS22785 b1d169c8c5be04e58469e61d9ef311a0 306 SUPERFAMILY SSF53850 90 301 7.29E-35 T 19-04-2016 ALIDE2_RS22785 b1d169c8c5be04e58469e61d9ef311a0 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.9E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22785 b1d169c8c5be04e58469e61d9ef311a0 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.9E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22785 b1d169c8c5be04e58469e61d9ef311a0 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.9E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22785 b1d169c8c5be04e58469e61d9ef311a0 306 Gene3D G3DSA:1.10.10.10 1 85 6.3E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22785 b1d169c8c5be04e58469e61d9ef311a0 306 Gene3D G3DSA:3.40.190.10 88 178 8.1E-21 T 19-04-2016 ALIDE2_RS15055 bc39b65db8f9f0cd1b457cecf920342e 327 PANTHER PTHR30349:SF32 7 281 9.2E-82 T 19-04-2016 ALIDE2_RS15055 bc39b65db8f9f0cd1b457cecf920342e 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 323 3.2E-86 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS15055 bc39b65db8f9f0cd1b457cecf920342e 327 PANTHER PTHR30349 7 281 9.2E-82 T 19-04-2016 ALIDE2_RS15055 bc39b65db8f9f0cd1b457cecf920342e 327 SUPERFAMILY SSF53850 119 282 1.85E-15 T 19-04-2016 ALIDE2_RS15055 bc39b65db8f9f0cd1b457cecf920342e 327 Gene3D G3DSA:3.40.190.10 130 264 2.9E-7 T 19-04-2016 ALIDE2_RS15055 bc39b65db8f9f0cd1b457cecf920342e 327 PIRSF PIRSF017082 1 326 1.3E-82 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS11540 95b215aa344464dc2b014b7d5cb31d92 202 SUPERFAMILY SSF46689 6 87 4.44E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS11540 95b215aa344464dc2b014b7d5cb31d92 202 Pfam PF08359 YsiA-like protein, C-terminal region 70 179 3.8E-5 T 19-04-2016 IPR013570 Transcription regulator YsiA, C-terminal ALIDE2_RS11540 95b215aa344464dc2b014b7d5cb31d92 202 Gene3D G3DSA:1.10.357.10 65 199 1.0E-26 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS11540 95b215aa344464dc2b014b7d5cb31d92 202 SUPERFAMILY SSF48498 84 199 1.2E-22 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS11540 95b215aa344464dc2b014b7d5cb31d92 202 Gene3D G3DSA:1.10.10.60 11 64 4.2E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS11540 95b215aa344464dc2b014b7d5cb31d92 202 PANTHER PTHR30055 1 201 2.3E-28 T 19-04-2016 ALIDE2_RS11540 95b215aa344464dc2b014b7d5cb31d92 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 63 1.5E-9 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS08715 d9e1c7ea5dd80c79462fd2565ad07d2d 405 SUPERFAMILY SSF56024 5 157 5.61E-8 T 19-04-2016 ALIDE2_RS08715 d9e1c7ea5dd80c79462fd2565ad07d2d 405 Gene3D G3DSA:3.30.870.10 47 152 3.1E-5 T 19-04-2016 ALIDE2_RS08715 d9e1c7ea5dd80c79462fd2565ad07d2d 405 Pfam PF13091 PLD-like domain 16 153 1.2E-10 T 19-04-2016 IPR025202 Phospholipase D-like domain ALIDE2_RS15650 a83cc341b013a0ea78a54d2f835d3239 225 PANTHER PTHR33254 8 221 8.5E-20 T 19-04-2016 ALIDE2_RS15650 a83cc341b013a0ea78a54d2f835d3239 225 SUPERFAMILY SSF89562 17 186 1.44E-31 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS15650 a83cc341b013a0ea78a54d2f835d3239 225 PANTHER PTHR33254:SF5 8 221 8.5E-20 T 19-04-2016 ALIDE2_RS15650 a83cc341b013a0ea78a54d2f835d3239 225 Pfam PF03737 Demethylmenaquinone methyltransferase 21 174 2.5E-29 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS15650 a83cc341b013a0ea78a54d2f835d3239 225 Gene3D G3DSA:3.50.30.40 17 183 1.2E-36 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS03035 62cbb61500c642a39c602a8a2a07e46f 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 175 5.0E-79 T 19-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ALIDE2_RS03035 62cbb61500c642a39c602a8a2a07e46f 181 SUPERFAMILY SSF51182 1 178 3.86E-80 T 19-04-2016 IPR011051 RmlC-like cupin domain ALIDE2_RS03035 62cbb61500c642a39c602a8a2a07e46f 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 4 178 5.2E-85 T 19-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ALIDE2_RS03035 62cbb61500c642a39c602a8a2a07e46f 181 Gene3D G3DSA:2.60.120.10 1 178 2.1E-85 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS03035 62cbb61500c642a39c602a8a2a07e46f 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 175 7.4E-76 T 19-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ALIDE2_RS03035 62cbb61500c642a39c602a8a2a07e46f 181 PANTHER PTHR21047 7 179 4.4E-77 T 19-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ALIDE2_RS15885 a3d3c3a475b15241a6694bf81aa88ffa 327 Pfam PF07859 alpha/beta hydrolase fold 95 300 1.6E-72 T 19-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 ALIDE2_RS15885 a3d3c3a475b15241a6694bf81aa88ffa 327 Gene3D G3DSA:3.40.50.1820 13 324 1.5E-95 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS15885 a3d3c3a475b15241a6694bf81aa88ffa 327 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 95 111 - T 19-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 ALIDE2_RS15885 a3d3c3a475b15241a6694bf81aa88ffa 327 PANTHER PTHR23024 65 321 1.3E-79 T 19-04-2016 ALIDE2_RS15885 a3d3c3a475b15241a6694bf81aa88ffa 327 SUPERFAMILY SSF53474 35 322 6.49E-71 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS15885 a3d3c3a475b15241a6694bf81aa88ffa 327 PANTHER PTHR23024:SF24 65 321 1.3E-79 T 19-04-2016 ALIDE2_RS05745 45723ab7704057e5e1b0d2fffe8c890e 189 Gene3D G3DSA:3.10.450.50 12 140 1.1E-26 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS05745 45723ab7704057e5e1b0d2fffe8c890e 189 Pfam PF13577 SnoaL-like domain 10 131 5.9E-19 T 19-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain ALIDE2_RS05745 45723ab7704057e5e1b0d2fffe8c890e 189 SUPERFAMILY SSF54427 9 139 3.07E-33 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS14300 0996c7ec82733dac562077a6f0ca9bdd 402 PIRSF PIRSF001413 3 402 1.2E-155 T 19-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 ALIDE2_RS14300 0996c7ec82733dac562077a6f0ca9bdd 402 Gene3D G3DSA:3.40.50.1100 108 180 5.7E-15 T 19-04-2016 ALIDE2_RS14300 0996c7ec82733dac562077a6f0ca9bdd 402 SUPERFAMILY SSF53686 11 399 9.56E-132 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS14300 0996c7ec82733dac562077a6f0ca9bdd 402 PANTHER PTHR10314 15 398 2.1E-179 T 19-04-2016 ALIDE2_RS14300 0996c7ec82733dac562077a6f0ca9bdd 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 387 1.1E-46 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS14300 0996c7ec82733dac562077a6f0ca9bdd 402 Gene3D G3DSA:3.40.50.1100 181 401 2.5E-85 T 19-04-2016 ALIDE2_RS14300 0996c7ec82733dac562077a6f0ca9bdd 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 89 103 - T 19-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 ALIDE2_RS14300 0996c7ec82733dac562077a6f0ca9bdd 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 400 48.704 T 19-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 ALIDE2_RS14300 0996c7ec82733dac562077a6f0ca9bdd 402 PANTHER PTHR10314:SF3 15 398 2.1E-179 T 19-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 ALIDE2_RS14300 0996c7ec82733dac562077a6f0ca9bdd 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 398 6.6E-165 T 19-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 ALIDE2_RS23855 c45840ace13c8e4d5548b498d74e01e9 320 SUPERFAMILY SSF81653 168 265 1.09E-27 T 19-04-2016 ALIDE2_RS23855 c45840ace13c8e4d5548b498d74e01e9 320 PANTHER PTHR24093:SF332 40 320 4.5E-98 T 19-04-2016 ALIDE2_RS23855 c45840ace13c8e4d5548b498d74e01e9 320 Gene3D G3DSA:2.70.150.10 108 266 2.7E-30 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS23855 c45840ace13c8e4d5548b498d74e01e9 320 Pfam PF00122 E1-E2 ATPase 136 320 1.4E-50 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 ALIDE2_RS23855 c45840ace13c8e4d5548b498d74e01e9 320 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 138 320 1.6E-23 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 ALIDE2_RS23855 c45840ace13c8e4d5548b498d74e01e9 320 PANTHER PTHR24093 40 320 4.5E-98 T 19-04-2016 ALIDE2_RS23855 c45840ace13c8e4d5548b498d74e01e9 320 SUPERFAMILY SSF81665 124 169 1.96E-5 T 19-04-2016 ALIDE2_RS23855 c45840ace13c8e4d5548b498d74e01e9 320 SUPERFAMILY SSF81665 266 320 1.96E-5 T 19-04-2016 ALIDE2_RS11290 7cb1ceba825b4f3a4d954a95556f7ec5 114 SUPERFAMILY SSF54292 24 103 2.36E-19 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS11290 7cb1ceba825b4f3a4d954a95556f7ec5 114 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 22 102 9.6E-30 T 19-04-2016 ALIDE2_RS11290 7cb1ceba825b4f3a4d954a95556f7ec5 114 Gene3D G3DSA:3.10.20.30 23 94 2.4E-7 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS05710 b1d42ea2c723a0ec35edfc80d5043da6 321 SUPERFAMILY SSF53850 76 284 9.2E-13 T 19-04-2016 ALIDE2_RS05710 b1d42ea2c723a0ec35edfc80d5043da6 321 PANTHER PTHR30349 1 318 2.3E-84 T 19-04-2016 ALIDE2_RS05710 b1d42ea2c723a0ec35edfc80d5043da6 321 PANTHER PTHR30349:SF16 1 318 2.3E-84 T 19-04-2016 ALIDE2_RS05710 b1d42ea2c723a0ec35edfc80d5043da6 321 PIRSF PIRSF017082 1 320 1.2E-80 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS05710 b1d42ea2c723a0ec35edfc80d5043da6 321 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 317 5.5E-82 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00070 71f20d4dea573be74a2044a48a5793dc 285 Gene3D G3DSA:3.90.226.10 9 273 1.5E-54 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS00070 71f20d4dea573be74a2044a48a5793dc 285 PANTHER PTHR11941:SF86 10 273 1.0E-56 T 19-04-2016 ALIDE2_RS00070 71f20d4dea573be74a2044a48a5793dc 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 275 1.9E-34 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS00070 71f20d4dea573be74a2044a48a5793dc 285 PANTHER PTHR11941 10 273 1.0E-56 T 19-04-2016 ALIDE2_RS00070 71f20d4dea573be74a2044a48a5793dc 285 SUPERFAMILY SSF52096 8 274 1.03E-58 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS04560 1f45c67fe1a0b2c8088d71e954b8f131 150 SUPERFAMILY SSF54197 4 141 9.19E-34 T 19-04-2016 IPR011146 HIT-like domain GO:0003824 ALIDE2_RS04560 1f45c67fe1a0b2c8088d71e954b8f131 150 PANTHER PTHR23089 25 144 1.0E-13 T 19-04-2016 IPR001310 Histidine triad (HIT) protein ALIDE2_RS04560 1f45c67fe1a0b2c8088d71e954b8f131 150 PANTHER PTHR23089:SF13 25 144 1.0E-13 T 19-04-2016 ALIDE2_RS04560 1f45c67fe1a0b2c8088d71e954b8f131 150 Gene3D G3DSA:3.30.428.10 3 140 2.6E-36 T 19-04-2016 IPR011146 HIT-like domain GO:0003824 ALIDE2_RS04560 1f45c67fe1a0b2c8088d71e954b8f131 150 PIRSF PIRSF000714 4 143 2.8E-40 T 19-04-2016 IPR026026 Histidine triad hydrolase, Hint-type ALIDE2_RS04560 1f45c67fe1a0b2c8088d71e954b8f131 150 Pfam PF01230 HIT domain 25 101 7.5E-14 T 19-04-2016 IPR001310 Histidine triad (HIT) protein ALIDE2_RS03890 c62aba5a75c5f6f81831770406731ad5 326 PANTHER PTHR30349:SF32 13 275 6.4E-87 T 19-04-2016 ALIDE2_RS03890 c62aba5a75c5f6f81831770406731ad5 326 PANTHER PTHR30349 13 275 6.4E-87 T 19-04-2016 ALIDE2_RS03890 c62aba5a75c5f6f81831770406731ad5 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 317 7.4E-78 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS03890 c62aba5a75c5f6f81831770406731ad5 326 SUPERFAMILY SSF53850 50 278 6.52E-14 T 19-04-2016 ALIDE2_RS03890 c62aba5a75c5f6f81831770406731ad5 326 PIRSF PIRSF017082 4 324 5.8E-75 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS21325 7e748d2f2539f0c96c9d4b9f13add69c 416 Pfam PF08495 FIST N domain 40 221 1.2E-28 T 19-04-2016 IPR013702 FIST domain, N-terminal ALIDE2_RS21325 7e748d2f2539f0c96c9d4b9f13add69c 416 Pfam PF10442 FIST C domain 223 395 2.0E-31 T 19-04-2016 IPR019494 FIST, C-domain ALIDE2_RS21325 7e748d2f2539f0c96c9d4b9f13add69c 416 SMART SM01204 223 397 4.9E-33 T 19-04-2016 IPR019494 FIST, C-domain ALIDE2_RS21325 7e748d2f2539f0c96c9d4b9f13add69c 416 SMART SM00897 37 222 5.0E-41 T 19-04-2016 IPR013702 FIST domain, N-terminal ALIDE2_RS01900 235d8e3ce030a4cbbebbff2f8b675a31 469 SUPERFAMILY SSF52540 77 355 1.03E-85 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01900 235d8e3ce030a4cbbebbff2f8b675a31 469 PANTHER PTHR15184:SF44 5 469 0.0 T 19-04-2016 ALIDE2_RS01900 235d8e3ce030a4cbbebbff2f8b675a31 469 Hamap MF_01347 ATP synthase subunit beta [atpB]. 3 467 56.607 T 19-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01900 235d8e3ce030a4cbbebbff2f8b675a31 469 Gene3D G3DSA:2.40.10.170 3 75 2.1E-28 T 19-04-2016 ALIDE2_RS01900 235d8e3ce030a4cbbebbff2f8b675a31 469 SUPERFAMILY SSF47917 352 468 2.12E-54 T 19-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01900 235d8e3ce030a4cbbebbff2f8b675a31 469 Gene3D G3DSA:3.40.50.300 77 350 3.5E-108 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01900 235d8e3ce030a4cbbebbff2f8b675a31 469 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 73 4.1E-19 T 19-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01900 235d8e3ce030a4cbbebbff2f8b675a31 469 SUPERFAMILY SSF50615 4 75 9.16E-25 T 19-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01900 235d8e3ce030a4cbbebbff2f8b675a31 469 Gene3D G3DSA:1.10.1140.10 352 468 3.6E-56 T 19-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01900 235d8e3ce030a4cbbebbff2f8b675a31 469 PANTHER PTHR15184 5 469 0.0 T 19-04-2016 ALIDE2_RS01900 235d8e3ce030a4cbbebbff2f8b675a31 469 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 1.4E-60 T 19-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01900 235d8e3ce030a4cbbebbff2f8b675a31 469 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 5 467 5.3E-248 T 19-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS01900 235d8e3ce030a4cbbebbff2f8b675a31 469 SMART SM00382 142 334 0.0063 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS01900 235d8e3ce030a4cbbebbff2f8b675a31 469 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 19-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ALIDE2_RS06185 88695ae685556a4662fa389e1fc105df 390 Pfam PF01070 FMN-dependent dehydrogenase 17 379 9.7E-134 T 19-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 ALIDE2_RS06185 88695ae685556a4662fa389e1fc105df 390 PIRSF PIRSF000138 2 383 7.3E-126 T 19-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 ALIDE2_RS06185 88695ae685556a4662fa389e1fc105df 390 SUPERFAMILY SSF51395 6 379 2.56E-105 T 19-04-2016 ALIDE2_RS06185 88695ae685556a4662fa389e1fc105df 390 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 277 283 - T 19-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 ALIDE2_RS06185 88695ae685556a4662fa389e1fc105df 390 PANTHER PTHR10578 1 384 4.5E-224 T 19-04-2016 ALIDE2_RS06185 88695ae685556a4662fa389e1fc105df 390 PANTHER PTHR10578:SF76 1 384 4.5E-224 T 19-04-2016 ALIDE2_RS06185 88695ae685556a4662fa389e1fc105df 390 Gene3D G3DSA:3.20.20.70 7 380 5.3E-142 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS09865 ae17776ae9fe2342244a96a72604829c 257 Pfam PF07786 Protein of unknown function (DUF1624) 14 242 4.5E-73 T 19-04-2016 IPR012429 Protein of unknown function DUF1624 KEGG: 00531+2.3.1.78 ALIDE2_RS04815 1227db29e78561b19dc124830833af62 308 Gene3D G3DSA:3.30.70.1320 258 299 4.4E-8 T 19-04-2016 ALIDE2_RS04815 1227db29e78561b19dc124830833af62 308 Gene3D G3DSA:3.30.70.1320 126 164 4.4E-8 T 19-04-2016 ALIDE2_RS04815 1227db29e78561b19dc124830833af62 308 Gene3D G3DSA:3.30.2090.10 171 251 4.0E-13 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS04815 1227db29e78561b19dc124830833af62 308 PANTHER PTHR32063 1 307 1.9E-106 T 19-04-2016 ALIDE2_RS04815 1227db29e78561b19dc124830833af62 308 Pfam PF00873 AcrB/AcrD/AcrF family 2 299 1.1E-70 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS04815 1227db29e78561b19dc124830833af62 308 SUPERFAMILY SSF82693 27 112 4.19E-17 T 19-04-2016 ALIDE2_RS04815 1227db29e78561b19dc124830833af62 308 PANTHER PTHR32063:SF24 1 307 1.9E-106 T 19-04-2016 ALIDE2_RS04815 1227db29e78561b19dc124830833af62 308 SUPERFAMILY SSF82693 255 299 1.26E-13 T 19-04-2016 ALIDE2_RS04815 1227db29e78561b19dc124830833af62 308 SUPERFAMILY SSF82693 124 167 1.26E-13 T 19-04-2016 ALIDE2_RS04815 1227db29e78561b19dc124830833af62 308 SUPERFAMILY SSF82714 171 251 5.1E-12 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS04815 1227db29e78561b19dc124830833af62 308 Gene3D G3DSA:3.30.70.1430 27 125 1.3E-20 T 19-04-2016 ALIDE2_RS11920 e2a8841860e3c14091f601e9d0d0f2fb 152 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 24 150 2.7E-25 T 19-04-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 ALIDE2_RS11920 e2a8841860e3c14091f601e9d0d0f2fb 152 PANTHER PTHR38439 17 152 3.0E-46 T 19-04-2016 ALIDE2_RS11920 e2a8841860e3c14091f601e9d0d0f2fb 152 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 128 144 - T 19-04-2016 IPR028871 Blue (type 1) copper protein, binding site ALIDE2_RS11920 e2a8841860e3c14091f601e9d0d0f2fb 152 PANTHER PTHR38439:SF2 17 152 3.0E-46 T 19-04-2016 ALIDE2_RS11920 e2a8841860e3c14091f601e9d0d0f2fb 152 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 30 148 1.0E-39 T 19-04-2016 ALIDE2_RS11920 e2a8841860e3c14091f601e9d0d0f2fb 152 TIGRFAM TIGR02695 azurin: azurin 26 150 1.1E-58 T 19-04-2016 IPR014068 Azurin, proteobacteria ALIDE2_RS11920 e2a8841860e3c14091f601e9d0d0f2fb 152 Gene3D G3DSA:2.60.40.420 25 150 6.1E-54 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS11920 e2a8841860e3c14091f601e9d0d0f2fb 152 SUPERFAMILY SSF49503 24 149 5.46E-44 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS08505 5a73459c8246e2fccaa1d1748bc8ffd1 200 Gene3D G3DSA:2.60.120.10 9 117 1.9E-35 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS08505 5a73459c8246e2fccaa1d1748bc8ffd1 200 PANTHER PTHR37943:SF1 1 126 3.2E-45 T 19-04-2016 ALIDE2_RS08505 5a73459c8246e2fccaa1d1748bc8ffd1 200 Pfam PF05962 HutD 10 165 9.0E-52 T 19-04-2016 IPR010282 Uncharacterised protein family HutD/Ves ALIDE2_RS08505 5a73459c8246e2fccaa1d1748bc8ffd1 200 SUPERFAMILY SSF51182 1 166 6.4E-54 T 19-04-2016 IPR011051 RmlC-like cupin domain ALIDE2_RS08505 5a73459c8246e2fccaa1d1748bc8ffd1 200 PANTHER PTHR37943 1 126 3.2E-45 T 19-04-2016 ALIDE2_RS06985 1a2f812df1d51ab197841895c0e30a91 273 PANTHER PTHR30457 14 267 7.8E-84 T 19-04-2016 ALIDE2_RS06985 1a2f812df1d51ab197841895c0e30a91 273 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 14 265 37.09 T 19-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 ALIDE2_RS06985 1a2f812df1d51ab197841895c0e30a91 273 SUPERFAMILY SSF64167 14 263 7.19E-82 T 19-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 ALIDE2_RS06985 1a2f812df1d51ab197841895c0e30a91 273 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 14 248 1.4E-62 T 19-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 ALIDE2_RS06985 1a2f812df1d51ab197841895c0e30a91 273 Gene3D G3DSA:3.40.1210.10 14 261 2.2E-83 T 19-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 ALIDE2_RS06985 1a2f812df1d51ab197841895c0e30a91 273 Pfam PF01975 Survival protein SurE 16 197 2.9E-55 T 19-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 ALIDE2_RS15405 eef6e1949d889e917579a3f3b48860e9 282 PANTHER PTHR20858:SF17 3 278 1.5E-121 T 19-04-2016 ALIDE2_RS15405 eef6e1949d889e917579a3f3b48860e9 282 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 15 270 1.2E-93 T 19-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ALIDE2_RS15405 eef6e1949d889e917579a3f3b48860e9 282 SUPERFAMILY SSF53613 12 272 1.14E-79 T 19-04-2016 IPR029056 Ribokinase-like ALIDE2_RS15405 eef6e1949d889e917579a3f3b48860e9 282 Gene3D G3DSA:3.40.1190.20 14 270 1.9E-103 T 19-04-2016 IPR029056 Ribokinase-like ALIDE2_RS15405 eef6e1949d889e917579a3f3b48860e9 282 PANTHER PTHR20858 3 278 1.5E-121 T 19-04-2016 ALIDE2_RS15405 eef6e1949d889e917579a3f3b48860e9 282 Pfam PF08543 Phosphomethylpyrimidine kinase 22 269 4.1E-93 T 19-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 ALIDE2_RS12605 070a1ce58f1582e7f35e4d93c9f0e872 526 Gene3D G3DSA:3.50.50.60 203 309 6.9E-74 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12605 070a1ce58f1582e7f35e4d93c9f0e872 526 Gene3D G3DSA:3.50.50.60 421 519 6.9E-74 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12605 070a1ce58f1582e7f35e4d93c9f0e872 526 Gene3D G3DSA:3.50.50.60 15 144 6.9E-74 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12605 070a1ce58f1582e7f35e4d93c9f0e872 526 SUPERFAMILY SSF54373 338 462 3.61E-12 T 19-04-2016 ALIDE2_RS12605 070a1ce58f1582e7f35e4d93c9f0e872 526 PANTHER PTHR11552 15 525 5.0E-95 T 19-04-2016 ALIDE2_RS12605 070a1ce58f1582e7f35e4d93c9f0e872 526 SUPERFAMILY SSF51905 15 314 7.02E-58 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12605 070a1ce58f1582e7f35e4d93c9f0e872 526 SUPERFAMILY SSF51905 461 522 7.02E-58 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12605 070a1ce58f1582e7f35e4d93c9f0e872 526 Pfam PF00732 GMC oxidoreductase 16 307 6.3E-18 T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS12605 070a1ce58f1582e7f35e4d93c9f0e872 526 PANTHER PTHR11552:SF139 15 525 5.0E-95 T 19-04-2016 ALIDE2_RS12605 070a1ce58f1582e7f35e4d93c9f0e872 526 Pfam PF05199 GMC oxidoreductase 396 512 9.6E-18 T 19-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 ALIDE2_RS17440 42330f462b3b39055ebb7910c62fa4b5 650 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 308 324 8.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS17440 42330f462b3b39055ebb7910c62fa4b5 650 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 339 358 8.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS17440 42330f462b3b39055ebb7910c62fa4b5 650 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 101 126 8.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS17440 42330f462b3b39055ebb7910c62fa4b5 650 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 515 530 8.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS17440 42330f462b3b39055ebb7910c62fa4b5 650 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 456 474 8.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS17440 42330f462b3b39055ebb7910c62fa4b5 650 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 198 217 8.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS17440 42330f462b3b39055ebb7910c62fa4b5 650 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 180 198 8.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS17440 42330f462b3b39055ebb7910c62fa4b5 650 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 542 559 8.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS17440 42330f462b3b39055ebb7910c62fa4b5 650 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 478 496 8.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS17440 42330f462b3b39055ebb7910c62fa4b5 650 PANTHER PTHR11686 54 646 2.7E-190 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS17440 42330f462b3b39055ebb7910c62fa4b5 650 SUPERFAMILY SSF56235 72 646 3.28E-140 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS17440 42330f462b3b39055ebb7910c62fa4b5 650 PANTHER PTHR11686:SF27 54 646 2.7E-190 T 19-04-2016 ALIDE2_RS17440 42330f462b3b39055ebb7910c62fa4b5 650 Pfam PF01019 Gamma-glutamyltranspeptidase 94 642 2.7E-139 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS22120 d5db19b274128cb96184e6b0640d165d 435 Pfam PF01400 Astacin (Peptidase family M12A) 94 278 1.4E-51 T 19-04-2016 IPR001506 Peptidase M12A, astacin GO:0004222|GO:0006508 ALIDE2_RS22120 d5db19b274128cb96184e6b0640d165d 435 PRINTS PR00480 Astacin family signature 266 279 4.6E-22 T 19-04-2016 IPR001506 Peptidase M12A, astacin GO:0004222|GO:0006508 ALIDE2_RS22120 d5db19b274128cb96184e6b0640d165d 435 PRINTS PR00480 Astacin family signature 226 241 4.6E-22 T 19-04-2016 IPR001506 Peptidase M12A, astacin GO:0004222|GO:0006508 ALIDE2_RS22120 d5db19b274128cb96184e6b0640d165d 435 PRINTS PR00480 Astacin family signature 114 132 4.6E-22 T 19-04-2016 IPR001506 Peptidase M12A, astacin GO:0004222|GO:0006508 ALIDE2_RS22120 d5db19b274128cb96184e6b0640d165d 435 PRINTS PR00480 Astacin family signature 170 188 4.6E-22 T 19-04-2016 IPR001506 Peptidase M12A, astacin GO:0004222|GO:0006508 ALIDE2_RS22120 d5db19b274128cb96184e6b0640d165d 435 PRINTS PR00480 Astacin family signature 189 206 4.6E-22 T 19-04-2016 IPR001506 Peptidase M12A, astacin GO:0004222|GO:0006508 ALIDE2_RS22120 d5db19b274128cb96184e6b0640d165d 435 SMART SM00235 91 231 7.1E-40 T 19-04-2016 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 ALIDE2_RS22120 d5db19b274128cb96184e6b0640d165d 435 SUPERFAMILY SSF55486 92 279 8.6E-46 T 19-04-2016 ALIDE2_RS22120 d5db19b274128cb96184e6b0640d165d 435 Gene3D G3DSA:3.40.390.10 94 279 1.8E-62 T 19-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 ALIDE2_RS22120 d5db19b274128cb96184e6b0640d165d 435 PANTHER PTHR10127 57 278 3.2E-77 T 19-04-2016 ALIDE2_RS10645 4be8d883ba50856d62e6037c6ccd4b89 429 PIRSF PIRSF000018 21 428 2.4E-131 T 19-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 ALIDE2_RS10645 4be8d883ba50856d62e6037c6ccd4b89 429 Gene3D G3DSA:1.10.3820.10 318 329 7.7E-4 T 19-04-2016 ALIDE2_RS10645 4be8d883ba50856d62e6037c6ccd4b89 429 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 320 404 4.5E-10 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS10645 4be8d883ba50856d62e6037c6ccd4b89 429 Pfam PF00034 Cytochrome c 51 150 2.2E-5 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS10645 4be8d883ba50856d62e6037c6ccd4b89 429 SUPERFAMILY SSF46626 321 424 1.41E-24 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS10645 4be8d883ba50856d62e6037c6ccd4b89 429 Gene3D G3DSA:1.10.760.10 48 150 6.2E-14 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS10645 4be8d883ba50856d62e6037c6ccd4b89 429 Gene3D G3DSA:1.10.760.10 192 302 4.4E-9 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS10645 4be8d883ba50856d62e6037c6ccd4b89 429 Gene3D G3DSA:1.10.760.10 330 426 2.8E-25 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS10645 4be8d883ba50856d62e6037c6ccd4b89 429 SUPERFAMILY SSF46626 41 172 1.97E-26 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS10645 4be8d883ba50856d62e6037c6ccd4b89 429 PANTHER PTHR35008 45 429 6.0E-151 T 19-04-2016 ALIDE2_RS10645 4be8d883ba50856d62e6037c6ccd4b89 429 PANTHER PTHR35008:SF5 45 429 6.0E-151 T 19-04-2016 ALIDE2_RS10645 4be8d883ba50856d62e6037c6ccd4b89 429 SUPERFAMILY SSF46626 193 302 2.68E-18 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS22345 5475cbc9d7643019934aeab0ddeacfba 387 PANTHER PTHR18919:SF108 5 387 8.0E-130 T 19-04-2016 ALIDE2_RS22345 5475cbc9d7643019934aeab0ddeacfba 387 Gene3D G3DSA:3.40.47.10 200 227 2.1E-18 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS22345 5475cbc9d7643019934aeab0ddeacfba 387 Gene3D G3DSA:3.40.47.10 25 116 2.1E-18 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS22345 5475cbc9d7643019934aeab0ddeacfba 387 SUPERFAMILY SSF53901 13 120 1.81E-23 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS22345 5475cbc9d7643019934aeab0ddeacfba 387 PIRSF PIRSF000429 5 381 1.0E-25 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS22345 5475cbc9d7643019934aeab0ddeacfba 387 PANTHER PTHR18919 5 387 8.0E-130 T 19-04-2016 ALIDE2_RS22345 5475cbc9d7643019934aeab0ddeacfba 387 Gene3D G3DSA:3.40.47.10 245 366 2.1E-15 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS22345 5475cbc9d7643019934aeab0ddeacfba 387 Gene3D G3DSA:3.40.47.10 148 185 2.1E-15 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS22345 5475cbc9d7643019934aeab0ddeacfba 387 SUPERFAMILY SSF53901 183 333 1.81E-23 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS22345 5475cbc9d7643019934aeab0ddeacfba 387 Pfam PF02803 Thiolase, C-terminal domain 254 372 4.6E-6 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS22345 5475cbc9d7643019934aeab0ddeacfba 387 SUPERFAMILY SSF53901 246 375 1.27E-25 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS22305 7e7a5ebf901486ef511426af144e34f1 536 SMART SM01003 13 149 2.3E-70 T 19-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal ALIDE2_RS22305 7e7a5ebf901486ef511426af144e34f1 536 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 153 379 3.0E-73 T 19-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ALIDE2_RS22305 7e7a5ebf901486ef511426af144e34f1 536 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 11 536 3.7E-217 T 19-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 ALIDE2_RS22305 7e7a5ebf901486ef511426af144e34f1 536 SMART SM01002 158 322 1.7E-83 T 19-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ALIDE2_RS22305 7e7a5ebf901486ef511426af144e34f1 536 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 445 536 3.6E-34 T 19-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 ALIDE2_RS22305 7e7a5ebf901486ef511426af144e34f1 536 SUPERFAMILY SSF52283 11 180 1.28E-54 T 19-04-2016 ALIDE2_RS22305 7e7a5ebf901486ef511426af144e34f1 536 Gene3D G3DSA:3.40.50.1770 11 198 7.4E-69 T 19-04-2016 ALIDE2_RS22305 7e7a5ebf901486ef511426af144e34f1 536 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 13 148 2.5E-47 T 19-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal ALIDE2_RS22305 7e7a5ebf901486ef511426af144e34f1 536 Gene3D G3DSA:3.40.50.1770 199 382 7.1E-46 T 19-04-2016 ALIDE2_RS22305 7e7a5ebf901486ef511426af144e34f1 536 PIRSF PIRSF000203 10 536 3.2E-236 T 19-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 ALIDE2_RS22305 7e7a5ebf901486ef511426af144e34f1 536 SUPERFAMILY SSF51735 150 326 1.77E-38 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22305 7e7a5ebf901486ef511426af144e34f1 536 PANTHER PTHR10160 11 536 8.5E-262 T 19-04-2016 ALIDE2_RS15830 03398b6a9068d343e5a8c702ad00eb0f 119 Pfam PF07238 PilZ domain 14 97 1.8E-6 T 19-04-2016 IPR009875 PilZ domain GO:0035438 ALIDE2_RS23330 00de13c6f9bf45e2032fdc7be113aac9 141 Gene3D G3DSA:3.30.370.10 42 135 5.0E-30 T 19-04-2016 IPR000468 Barstar (barnase inhibitor) ALIDE2_RS23330 00de13c6f9bf45e2032fdc7be113aac9 141 Pfam PF01337 Barstar (barnase inhibitor) 46 130 1.2E-25 T 19-04-2016 IPR000468 Barstar (barnase inhibitor) ALIDE2_RS23330 00de13c6f9bf45e2032fdc7be113aac9 141 SUPERFAMILY SSF52038 42 134 8.37E-23 T 19-04-2016 IPR000468 Barstar (barnase inhibitor) ALIDE2_RS12370 7f4cd083191f5769f5d72430b034254c 335 PANTHER PTHR23408:SF17 1 332 3.2E-137 T 19-04-2016 ALIDE2_RS12370 7f4cd083191f5769f5d72430b034254c 335 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 19 327 3.7E-99 T 19-04-2016 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 ALIDE2_RS12370 7f4cd083191f5769f5d72430b034254c 335 Gene3D G3DSA:1.20.5.170 8 54 7.2E-17 T 19-04-2016 ALIDE2_RS12370 7f4cd083191f5769f5d72430b034254c 335 Gene3D G3DSA:3.40.50.300 55 266 9.4E-48 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12370 7f4cd083191f5769f5d72430b034254c 335 SUPERFAMILY SSF52540 19 330 4.83E-84 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12370 7f4cd083191f5769f5d72430b034254c 335 PANTHER PTHR23408 1 332 3.2E-137 T 19-04-2016 ALIDE2_RS12370 7f4cd083191f5769f5d72430b034254c 335 Pfam PF03308 ArgK protein 22 299 2.2E-102 T 19-04-2016 ALIDE2_RS02240 b35996535ac6b172bf37d082d6a4024c 378 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 10 350 1.2E-136 T 19-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 ALIDE2_RS02240 b35996535ac6b172bf37d082d6a4024c 378 Pfam PF00437 Type II/IV secretion system protein 126 256 1.6E-36 T 19-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ALIDE2_RS02240 b35996535ac6b172bf37d082d6a4024c 378 Gene3D G3DSA:3.40.50.300 107 351 1.3E-65 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02240 b35996535ac6b172bf37d082d6a4024c 378 PANTHER PTHR30486 10 367 1.4E-152 T 19-04-2016 ALIDE2_RS02240 b35996535ac6b172bf37d082d6a4024c 378 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 200 214 - T 19-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ALIDE2_RS02240 b35996535ac6b172bf37d082d6a4024c 378 PANTHER PTHR30486:SF3 10 367 1.4E-152 T 19-04-2016 ALIDE2_RS02240 b35996535ac6b172bf37d082d6a4024c 378 SUPERFAMILY SSF52540 7 344 9.54E-68 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18220 8c2c4423bed0536fbce6549605244b68 377 Gene3D G3DSA:3.40.50.2300 29 229 9.5E-59 T 19-04-2016 ALIDE2_RS18220 8c2c4423bed0536fbce6549605244b68 377 PANTHER PTHR30483 7 370 9.2E-78 T 19-04-2016 ALIDE2_RS18220 8c2c4423bed0536fbce6549605244b68 377 Pfam PF13458 Periplasmic binding protein 29 370 1.5E-63 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS18220 8c2c4423bed0536fbce6549605244b68 377 SUPERFAMILY SSF53822 29 373 2.2E-89 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS18220 8c2c4423bed0536fbce6549605244b68 377 PANTHER PTHR30483:SF20 7 370 9.2E-78 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS07015 3529ebd527cb586b88167aa1e7c5e439 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 9.0E-39 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS07015 3529ebd527cb586b88167aa1e7c5e439 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 9.0E-39 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS07015 3529ebd527cb586b88167aa1e7c5e439 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 9.0E-39 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS07015 3529ebd527cb586b88167aa1e7c5e439 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 9.0E-39 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS07015 3529ebd527cb586b88167aa1e7c5e439 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 9.0E-39 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS07015 3529ebd527cb586b88167aa1e7c5e439 141 PANTHER PTHR11349 1 134 1.0E-65 T 19-04-2016 ALIDE2_RS07015 3529ebd527cb586b88167aa1e7c5e439 141 Pfam PF00334 Nucleoside diphosphate kinase 4 135 1.7E-54 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS07015 3529ebd527cb586b88167aa1e7c5e439 141 SUPERFAMILY SSF54919 1 138 1.96E-56 T 19-04-2016 ALIDE2_RS07015 3529ebd527cb586b88167aa1e7c5e439 141 SMART SM00562 3 140 4.8E-81 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS07015 3529ebd527cb586b88167aa1e7c5e439 141 Gene3D G3DSA:3.30.70.141 1 137 3.6E-58 T 19-04-2016 ALIDE2_RS07015 3529ebd527cb586b88167aa1e7c5e439 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.547 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 12 385 3.7E-139 T 19-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 Gene3D G3DSA:3.40.50.880 166 385 6.7E-76 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 PRINTS PR00096 Glutamine amidotransferase superfamily signature 274 285 1.0E-10 T 19-04-2016 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 PRINTS PR00096 Glutamine amidotransferase superfamily signature 359 372 1.0E-10 T 19-04-2016 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 PRINTS PR00096 Glutamine amidotransferase superfamily signature 246 255 1.0E-10 T 19-04-2016 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 12 139 2.1E-52 T 19-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 Pfam PF00117 Glutamine amidotransferase class-I 207 381 5.1E-44 T 19-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 SUPERFAMILY SSF52021 11 146 4.05E-56 T 19-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 10 388 46.694 T 19-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 PANTHER PTHR11405 10 183 4.2E-222 T 19-04-2016 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 PANTHER PTHR11405 199 386 4.2E-222 T 19-04-2016 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 316 327 1.5E-38 T 19-04-2016 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 204 218 1.5E-38 T 19-04-2016 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 291 308 1.5E-38 T 19-04-2016 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 243 257 1.5E-38 T 19-04-2016 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 274 290 1.5E-38 T 19-04-2016 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 PRINTS PR00097 Anthranilate synthase component II signature 246 255 1.9E-5 T 19-04-2016 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 PRINTS PR00097 Anthranilate synthase component II signature 359 372 1.9E-5 T 19-04-2016 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 PRINTS PR00097 Anthranilate synthase component II signature 274 285 1.9E-5 T 19-04-2016 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 SUPERFAMILY SSF52317 168 385 4.41E-58 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 Gene3D G3DSA:3.50.30.20 12 143 1.1E-58 T 19-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS13370 2c95dbfd590650d9ad510c63c55e2a0a 392 SMART SM01097 10 140 1.1E-90 T 19-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 ALIDE2_RS07740 d1ef77de7deceb3232f2ad5d5decb378 388 PANTHER PTHR30483:SF6 9 350 4.4E-77 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS07740 d1ef77de7deceb3232f2ad5d5decb378 388 Gene3D G3DSA:3.40.50.2300 163 309 8.3E-27 T 19-04-2016 ALIDE2_RS07740 d1ef77de7deceb3232f2ad5d5decb378 388 PANTHER PTHR30483 9 350 4.4E-77 T 19-04-2016 ALIDE2_RS07740 d1ef77de7deceb3232f2ad5d5decb378 388 Gene3D G3DSA:3.40.50.2300 28 157 8.8E-28 T 19-04-2016 ALIDE2_RS07740 d1ef77de7deceb3232f2ad5d5decb378 388 Gene3D G3DSA:3.40.50.2300 310 344 8.8E-28 T 19-04-2016 ALIDE2_RS07740 d1ef77de7deceb3232f2ad5d5decb378 388 Pfam PF13458 Periplasmic binding protein 33 344 4.4E-53 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS07740 d1ef77de7deceb3232f2ad5d5decb378 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 55 71 5.5E-6 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS07740 d1ef77de7deceb3232f2ad5d5decb378 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 33 49 5.5E-6 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS07740 d1ef77de7deceb3232f2ad5d5decb378 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 288 301 5.5E-6 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS07740 d1ef77de7deceb3232f2ad5d5decb378 388 SUPERFAMILY SSF53822 33 384 5.23E-65 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS22095 6a1c61f0496a31bf567e40048f05d616 488 PANTHER PTHR32024:SF2 1 488 9.1E-165 T 19-04-2016 ALIDE2_RS22095 6a1c61f0496a31bf567e40048f05d616 488 Pfam PF02386 Cation transport protein 49 478 2.8E-58 T 19-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 ALIDE2_RS22095 6a1c61f0496a31bf567e40048f05d616 488 PANTHER PTHR32024 1 488 9.1E-165 T 19-04-2016 ALIDE2_RS22095 6a1c61f0496a31bf567e40048f05d616 488 PIRSF PIRSF006247 1 488 2.5E-160 T 19-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 ALIDE2_RS05540 807fc171b1007d41bdcadc3af69caa64 155 PANTHER PTHR30295 1 155 7.4E-86 T 19-04-2016 ALIDE2_RS05540 807fc171b1007d41bdcadc3af69caa64 155 Pfam PF00210 Ferritin-like domain 10 144 2.7E-32 T 19-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ALIDE2_RS05540 807fc171b1007d41bdcadc3af69caa64 155 Gene3D G3DSA:1.20.1260.10 1 154 1.7E-51 T 19-04-2016 IPR012347 Ferritin-related ALIDE2_RS05540 807fc171b1007d41bdcadc3af69caa64 155 PANTHER PTHR30295:SF9 1 155 7.4E-86 T 19-04-2016 ALIDE2_RS05540 807fc171b1007d41bdcadc3af69caa64 155 PIRSF PIRSF002560 1 155 1.5E-59 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS05540 807fc171b1007d41bdcadc3af69caa64 155 PRINTS PR00601 Bacterioferritin signature 23 43 1.1E-36 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS05540 807fc171b1007d41bdcadc3af69caa64 155 PRINTS PR00601 Bacterioferritin signature 106 126 1.1E-36 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS05540 807fc171b1007d41bdcadc3af69caa64 155 PRINTS PR00601 Bacterioferritin signature 85 105 1.1E-36 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS05540 807fc171b1007d41bdcadc3af69caa64 155 PRINTS PR00601 Bacterioferritin signature 3 22 1.1E-36 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS05540 807fc171b1007d41bdcadc3af69caa64 155 PRINTS PR00601 Bacterioferritin signature 44 64 1.1E-36 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS05540 807fc171b1007d41bdcadc3af69caa64 155 PRINTS PR00601 Bacterioferritin signature 128 149 1.1E-36 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS05540 807fc171b1007d41bdcadc3af69caa64 155 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS05540 807fc171b1007d41bdcadc3af69caa64 155 SUPERFAMILY SSF47240 1 155 1.94E-42 T 19-04-2016 IPR009078 Ferritin-like superfamily ALIDE2_RS05540 807fc171b1007d41bdcadc3af69caa64 155 TIGRFAM TIGR00754 bfr: bacterioferritin 1 153 1.5E-42 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS04115 33ae63ed9f32dc30209a7aee95299613 82 Gene3D G3DSA:3.30.300.90 1 80 9.9E-28 T 19-04-2016 IPR002634 BolA protein ALIDE2_RS04115 33ae63ed9f32dc30209a7aee95299613 82 PIRSF PIRSF003113 1 82 1.6E-21 T 19-04-2016 IPR002634 BolA protein ALIDE2_RS04115 33ae63ed9f32dc30209a7aee95299613 82 Pfam PF01722 BolA-like protein 22 74 7.8E-17 T 19-04-2016 IPR002634 BolA protein ALIDE2_RS04115 33ae63ed9f32dc30209a7aee95299613 82 PANTHER PTHR12735 3 80 5.6E-19 T 19-04-2016 ALIDE2_RS04115 33ae63ed9f32dc30209a7aee95299613 82 SUPERFAMILY SSF82657 1 79 5.62E-27 T 19-04-2016 IPR002634 BolA protein ALIDE2_RS04115 33ae63ed9f32dc30209a7aee95299613 82 PANTHER PTHR12735:SF3 3 80 5.6E-19 T 19-04-2016 ALIDE2_RS20670 ba6844cbb515fceb8827b96b632436e4 326 PANTHER PTHR30349 2 287 2.5E-72 T 19-04-2016 ALIDE2_RS20670 ba6844cbb515fceb8827b96b632436e4 326 PANTHER PTHR30349:SF30 2 287 2.5E-72 T 19-04-2016 ALIDE2_RS20670 ba6844cbb515fceb8827b96b632436e4 326 SUPERFAMILY SSF53850 97 281 3.98E-11 T 19-04-2016 ALIDE2_RS20670 ba6844cbb515fceb8827b96b632436e4 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 322 2.8E-68 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS20670 ba6844cbb515fceb8827b96b632436e4 326 PIRSF PIRSF017082 1 325 1.1E-73 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS19085 f5ceba87baa65892225b40aeb591f65a 376 Pfam PF01494 FAD binding domain 124 324 5.6E-18 T 19-04-2016 IPR002938 FAD-binding domain GO:0071949 ALIDE2_RS19085 f5ceba87baa65892225b40aeb591f65a 376 PANTHER PTHR13789 2 374 6.5E-63 T 19-04-2016 ALIDE2_RS19085 f5ceba87baa65892225b40aeb591f65a 376 Gene3D G3DSA:3.50.50.60 246 341 6.1E-24 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS19085 f5ceba87baa65892225b40aeb591f65a 376 Gene3D G3DSA:3.50.50.60 5 156 6.1E-24 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS19085 f5ceba87baa65892225b40aeb591f65a 376 PANTHER PTHR13789:SF5 2 374 6.5E-63 T 19-04-2016 ALIDE2_RS19085 f5ceba87baa65892225b40aeb591f65a 376 SUPERFAMILY SSF51905 4 151 1.51E-33 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS19085 f5ceba87baa65892225b40aeb591f65a 376 SUPERFAMILY SSF51905 261 375 1.51E-33 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS19085 f5ceba87baa65892225b40aeb591f65a 376 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 279 292 - T 19-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 ALIDE2_RS19085 f5ceba87baa65892225b40aeb591f65a 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 296 3.8E-10 T 19-04-2016 ALIDE2_RS19085 f5ceba87baa65892225b40aeb591f65a 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 265 280 3.8E-10 T 19-04-2016 ALIDE2_RS19085 f5ceba87baa65892225b40aeb591f65a 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.8E-10 T 19-04-2016 ALIDE2_RS22330 bf0bca5c2091356c3b907a64b7ebbc22 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 256 1.6E-41 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS22330 bf0bca5c2091356c3b907a64b7ebbc22 259 PANTHER PTHR11941 18 259 1.7E-65 T 19-04-2016 ALIDE2_RS22330 bf0bca5c2091356c3b907a64b7ebbc22 259 SUPERFAMILY SSF52096 12 257 2.26E-67 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS22330 bf0bca5c2091356c3b907a64b7ebbc22 259 Gene3D G3DSA:3.90.226.10 15 256 2.9E-65 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS22330 bf0bca5c2091356c3b907a64b7ebbc22 259 PANTHER PTHR11941:SF54 18 259 1.7E-65 T 19-04-2016 ALIDE2_RS00405 5b3b7fce813fe521a64f71b182583aa5 422 PANTHER PTHR13789 11 414 9.2E-69 T 19-04-2016 ALIDE2_RS00405 5b3b7fce813fe521a64f71b182583aa5 422 PANTHER PTHR13789:SF5 11 414 9.2E-69 T 19-04-2016 ALIDE2_RS00405 5b3b7fce813fe521a64f71b182583aa5 422 Gene3D G3DSA:3.50.50.60 12 198 2.2E-39 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS00405 5b3b7fce813fe521a64f71b182583aa5 422 Gene3D G3DSA:3.50.50.60 290 379 2.2E-39 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS00405 5b3b7fce813fe521a64f71b182583aa5 422 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 13 412 2.2E-104 T 19-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 ALIDE2_RS00405 5b3b7fce813fe521a64f71b182583aa5 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 13 35 4.3E-14 T 19-04-2016 ALIDE2_RS00405 5b3b7fce813fe521a64f71b182583aa5 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 172 187 4.3E-14 T 19-04-2016 ALIDE2_RS00405 5b3b7fce813fe521a64f71b182583aa5 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 317 4.3E-14 T 19-04-2016 ALIDE2_RS00405 5b3b7fce813fe521a64f71b182583aa5 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 317 333 4.3E-14 T 19-04-2016 ALIDE2_RS00405 5b3b7fce813fe521a64f71b182583aa5 422 Pfam PF01494 FAD binding domain 12 368 2.5E-24 T 19-04-2016 IPR002938 FAD-binding domain GO:0071949 ALIDE2_RS00405 5b3b7fce813fe521a64f71b182583aa5 422 SUPERFAMILY SSF51905 13 193 1.21E-49 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS00405 5b3b7fce813fe521a64f71b182583aa5 422 SUPERFAMILY SSF51905 289 406 1.21E-49 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS17725 c1ad3ad985954f013bf479b0dc880748 145 ProSitePatterns PS00892 HIT domain signature. 95 113 - T 19-04-2016 IPR019808 Histidine triad, conserved site ALIDE2_RS17725 c1ad3ad985954f013bf479b0dc880748 145 SUPERFAMILY SSF54197 12 145 2.63E-39 T 19-04-2016 IPR011146 HIT-like domain GO:0003824 ALIDE2_RS17725 c1ad3ad985954f013bf479b0dc880748 145 Gene3D G3DSA:3.30.428.10 12 145 4.2E-38 T 19-04-2016 IPR011146 HIT-like domain GO:0003824 ALIDE2_RS17725 c1ad3ad985954f013bf479b0dc880748 145 Pfam PF01230 HIT domain 21 116 3.8E-24 T 19-04-2016 IPR001310 Histidine triad (HIT) protein ALIDE2_RS17725 c1ad3ad985954f013bf479b0dc880748 145 PANTHER PTHR23089 9 118 1.8E-41 T 19-04-2016 IPR001310 Histidine triad (HIT) protein ALIDE2_RS17725 c1ad3ad985954f013bf479b0dc880748 145 PRINTS PR00332 Histidine triad family signature 102 112 2.1E-13 T 19-04-2016 IPR001310 Histidine triad (HIT) protein ALIDE2_RS17725 c1ad3ad985954f013bf479b0dc880748 145 PRINTS PR00332 Histidine triad family signature 14 30 2.1E-13 T 19-04-2016 IPR001310 Histidine triad (HIT) protein ALIDE2_RS17725 c1ad3ad985954f013bf479b0dc880748 145 PRINTS PR00332 Histidine triad family signature 35 53 2.1E-13 T 19-04-2016 IPR001310 Histidine triad (HIT) protein ALIDE2_RS16175 eecce7c02b5db1ee0d92ffe71a03f6c7 986 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 62 113 1.2E-7 T 19-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal ALIDE2_RS16175 eecce7c02b5db1ee0d92ffe71a03f6c7 986 Pfam PF13244 Domain of unknown function (DUF4040) 615 680 3.5E-20 T 19-04-2016 IPR025383 Domain of unknown function DUF4040 ALIDE2_RS16175 eecce7c02b5db1ee0d92ffe71a03f6c7 986 PANTHER PTHR22773:SF46 1 576 5.3E-207 T 19-04-2016 ALIDE2_RS16175 eecce7c02b5db1ee0d92ffe71a03f6c7 986 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 822 943 2.2E-32 T 19-04-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein ALIDE2_RS16175 eecce7c02b5db1ee0d92ffe71a03f6c7 986 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 150 171 3.78E-35 T 19-04-2016 ALIDE2_RS16175 eecce7c02b5db1ee0d92ffe71a03f6c7 986 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 3.78E-35 T 19-04-2016 ALIDE2_RS16175 eecce7c02b5db1ee0d92ffe71a03f6c7 986 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 3.78E-35 T 19-04-2016 ALIDE2_RS16175 eecce7c02b5db1ee0d92ffe71a03f6c7 986 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 3.78E-35 T 19-04-2016 ALIDE2_RS16175 eecce7c02b5db1ee0d92ffe71a03f6c7 986 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 3.78E-35 T 19-04-2016 ALIDE2_RS16175 eecce7c02b5db1ee0d92ffe71a03f6c7 986 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 3.78E-35 T 19-04-2016 ALIDE2_RS16175 eecce7c02b5db1ee0d92ffe71a03f6c7 986 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 3.78E-35 T 19-04-2016 ALIDE2_RS16175 eecce7c02b5db1ee0d92ffe71a03f6c7 986 PANTHER PTHR22773 1 576 5.3E-207 T 19-04-2016 ALIDE2_RS16175 eecce7c02b5db1ee0d92ffe71a03f6c7 986 Pfam PF00361 Proton-conducting membrane transporter 126 405 6.4E-63 T 19-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 ALIDE2_RS12895 af582590f00f792929fbe948c182e561 930 PANTHER PTHR11615:SF119 5 740 2.7E-222 T 19-04-2016 ALIDE2_RS12895 af582590f00f792929fbe948c182e561 930 SMART SM00926 2 56 3.6E-20 T 19-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 ALIDE2_RS12895 af582590f00f792929fbe948c182e561 930 SUPERFAMILY SSF53706 3 599 2.09E-186 T 19-04-2016 ALIDE2_RS12895 af582590f00f792929fbe948c182e561 930 Gene3D G3DSA:2.20.25.90 2 52 3.1E-21 T 19-04-2016 ALIDE2_RS12895 af582590f00f792929fbe948c182e561 930 SUPERFAMILY SSF50692 551 723 1.51E-40 T 19-04-2016 IPR009010 Aspartate decarboxylase-like domain ALIDE2_RS12895 af582590f00f792929fbe948c182e561 930 PANTHER PTHR11615 5 740 2.7E-222 T 19-04-2016 ALIDE2_RS12895 af582590f00f792929fbe948c182e561 930 Pfam PF01568 Molydopterin dinucleotide binding domain 598 716 8.5E-27 T 19-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 ALIDE2_RS12895 af582590f00f792929fbe948c182e561 930 Gene3D G3DSA:2.40.40.20 550 723 7.4E-44 T 19-04-2016 ALIDE2_RS12895 af582590f00f792929fbe948c182e561 930 Gene3D G3DSA:3.40.228.10 139 327 5.7E-59 T 19-04-2016 ALIDE2_RS12895 af582590f00f792929fbe948c182e561 930 Pfam PF00384 Molybdopterin oxidoreductase 63 498 1.8E-76 T 19-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS12895 af582590f00f792929fbe948c182e561 930 Gene3D G3DSA:3.40.50.740 328 350 2.1E-73 T 19-04-2016 ALIDE2_RS12895 af582590f00f792929fbe948c182e561 930 Gene3D G3DSA:3.40.50.740 384 541 2.1E-73 T 19-04-2016 ALIDE2_RS12895 af582590f00f792929fbe948c182e561 930 Gene3D G3DSA:3.40.50.740 63 137 2.1E-73 T 19-04-2016 ALIDE2_RS12895 af582590f00f792929fbe948c182e561 930 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 4 51 3.2E-19 T 19-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 ALIDE2_RS12895 af582590f00f792929fbe948c182e561 930 Pfam PF04324 BFD-like [2Fe-2S] binding domain 874 926 1.5E-7 T 19-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain ALIDE2_RS09730 64085292064006297e9baf63dc987199 141 Pfam PF03203 MerC mercury resistance protein 10 121 4.1E-19 T 19-04-2016 IPR004891 MerC mercury resistance protein ALIDE2_RS09730 64085292064006297e9baf63dc987199 141 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 21 141 1.0E-55 T 19-04-2016 IPR004891 MerC mercury resistance protein ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 Gene3D G3DSA:3.30.499.10 6 168 2.2E-23 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 Gene3D G3DSA:3.40.1060.10 170 284 7.9E-29 T 19-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 Pfam PF00330 Aconitase family (aconitate hydratase) 11 461 4.0E-134 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 Gene3D G3DSA:3.30.499.10 339 468 9.7E-58 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 PANTHER PTHR11670 6 311 3.7E-190 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 PANTHER PTHR11670 331 469 3.7E-190 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 ProSitePatterns PS01244 Aconitase family signature 2. 403 416 - T 19-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 PANTHER PTHR11670:SF12 6 311 3.7E-190 T 19-04-2016 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 PANTHER PTHR11670:SF12 331 469 3.7E-190 T 19-04-2016 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 ProSitePatterns PS00450 Aconitase family signature 1. 343 359 - T 19-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 SUPERFAMILY SSF53732 5 468 6.15E-147 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 PRINTS PR00415 Aconitase family signature 112 120 2.4E-37 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 PRINTS PR00415 Aconitase family signature 199 212 2.4E-37 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 PRINTS PR00415 Aconitase family signature 290 304 2.4E-37 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 PRINTS PR00415 Aconitase family signature 123 136 2.4E-37 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 PRINTS PR00415 Aconitase family signature 403 416 2.4E-37 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 PRINTS PR00415 Aconitase family signature 213 226 2.4E-37 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 PRINTS PR00415 Aconitase family signature 137 152 2.4E-37 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 PRINTS PR00415 Aconitase family signature 347 358 2.4E-37 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS19540 d5d4f237b591b2a7edf648bbc771feba 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 6 468 2.6E-169 T 19-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS20135 e7124026341fcb20fd4241d8abbf89ff 392 ProSitePatterns PS01347 MraY family signature 1. 71 83 - T 19-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS20135 e7124026341fcb20fd4241d8abbf89ff 392 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 71 83 9.8E-6 T 19-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS20135 e7124026341fcb20fd4241d8abbf89ff 392 ProSitePatterns PS01348 MraY family signature 2. 215 226 - T 19-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS20135 e7124026341fcb20fd4241d8abbf89ff 392 PANTHER PTHR22926:SF5 178 392 4.6E-156 T 19-04-2016 ALIDE2_RS20135 e7124026341fcb20fd4241d8abbf89ff 392 PANTHER PTHR22926:SF5 2 155 4.6E-156 T 19-04-2016 ALIDE2_RS20135 e7124026341fcb20fd4241d8abbf89ff 392 PANTHER PTHR22926 178 392 4.6E-156 T 19-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS20135 e7124026341fcb20fd4241d8abbf89ff 392 PANTHER PTHR22926 2 155 4.6E-156 T 19-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS20135 e7124026341fcb20fd4241d8abbf89ff 392 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 28 390 23.241 T 19-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS20135 e7124026341fcb20fd4241d8abbf89ff 392 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 41 392 8.1E-122 T 19-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS20135 e7124026341fcb20fd4241d8abbf89ff 392 Pfam PF00953 Glycosyl transferase family 4 102 310 1.6E-34 T 19-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS16815 6514b5fd0309ac8e63747629fb84e21c 221 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 2.1E-9 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS16815 6514b5fd0309ac8e63747629fb84e21c 221 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 2.1E-9 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS16815 6514b5fd0309ac8e63747629fb84e21c 221 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 2.1E-9 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS16815 6514b5fd0309ac8e63747629fb84e21c 221 Pfam PF00581 Rhodanese-like domain 123 213 3.5E-11 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS16815 6514b5fd0309ac8e63747629fb84e21c 221 Pfam PF12840 Helix-turn-helix domain 16 74 3.1E-9 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS16815 6514b5fd0309ac8e63747629fb84e21c 221 PANTHER PTHR12231:SF137 93 221 4.9E-17 T 19-04-2016 ALIDE2_RS16815 6514b5fd0309ac8e63747629fb84e21c 221 SMART SM00450 120 216 5.1E-15 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS16815 6514b5fd0309ac8e63747629fb84e21c 221 Gene3D G3DSA:3.40.250.10 123 220 3.1E-23 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS16815 6514b5fd0309ac8e63747629fb84e21c 221 SUPERFAMILY SSF52821 109 220 1.03E-26 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS16815 6514b5fd0309ac8e63747629fb84e21c 221 PANTHER PTHR12231 93 221 4.9E-17 T 19-04-2016 ALIDE2_RS16815 6514b5fd0309ac8e63747629fb84e21c 221 SUPERFAMILY SSF46785 5 89 4.74E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS16815 6514b5fd0309ac8e63747629fb84e21c 221 Gene3D G3DSA:1.10.10.10 5 99 4.1E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS16815 6514b5fd0309ac8e63747629fb84e21c 221 SMART SM00418 16 94 1.3E-20 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS00720 9c787c4feb8b99ed37f8e1e2f058faa2 327 SUPERFAMILY SSF53850 123 290 4.1E-17 T 19-04-2016 ALIDE2_RS00720 9c787c4feb8b99ed37f8e1e2f058faa2 327 Gene3D G3DSA:3.40.190.10 133 230 7.5E-7 T 19-04-2016 ALIDE2_RS00720 9c787c4feb8b99ed37f8e1e2f058faa2 327 PANTHER PTHR30349:SF1 34 294 4.5E-70 T 19-04-2016 ALIDE2_RS00720 9c787c4feb8b99ed37f8e1e2f058faa2 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 324 6.2E-80 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00720 9c787c4feb8b99ed37f8e1e2f058faa2 327 PIRSF PIRSF017082 1 326 5.2E-76 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00720 9c787c4feb8b99ed37f8e1e2f058faa2 327 PANTHER PTHR30349 34 294 4.5E-70 T 19-04-2016 ALIDE2_RS12725 9022a77a3828a22525f1263197b54aa4 596 SUPERFAMILY SSF47203 281 459 3.38E-43 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS12725 9022a77a3828a22525f1263197b54aa4 596 Gene3D G3DSA:1.10.540.10 35 157 1.4E-16 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS12725 9022a77a3828a22525f1263197b54aa4 596 PANTHER PTHR10909:SF296 3 474 1.7E-188 T 19-04-2016 ALIDE2_RS12725 9022a77a3828a22525f1263197b54aa4 596 PANTHER PTHR10909 3 474 1.7E-188 T 19-04-2016 ALIDE2_RS12725 9022a77a3828a22525f1263197b54aa4 596 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 592 1.6E-29 T 19-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain ALIDE2_RS12725 9022a77a3828a22525f1263197b54aa4 596 Gene3D G3DSA:1.20.140.10 272 458 4.0E-52 T 19-04-2016 ALIDE2_RS12725 9022a77a3828a22525f1263197b54aa4 596 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 155 2.9E-11 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS12725 9022a77a3828a22525f1263197b54aa4 596 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 2 32 1.1E-8 T 19-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria ALIDE2_RS12725 9022a77a3828a22525f1263197b54aa4 596 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 270 2.1E-15 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS12725 9022a77a3828a22525f1263197b54aa4 596 SUPERFAMILY SSF56645 35 293 2.62E-56 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS12725 9022a77a3828a22525f1263197b54aa4 596 Gene3D G3DSA:2.40.110.10 160 271 1.9E-25 T 19-04-2016 ALIDE2_RS12725 9022a77a3828a22525f1263197b54aa4 596 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 449 4.9E-26 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS09325 6bb1d7402b4158b28a95703a3e77e210 323 SUPERFAMILY SSF53850 114 282 9.41E-8 T 19-04-2016 ALIDE2_RS09325 6bb1d7402b4158b28a95703a3e77e210 323 PIRSF PIRSF017082 1 323 7.4E-67 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS09325 6bb1d7402b4158b28a95703a3e77e210 323 PANTHER PTHR30349:SF32 4 295 3.3E-78 T 19-04-2016 ALIDE2_RS09325 6bb1d7402b4158b28a95703a3e77e210 323 PANTHER PTHR30349 4 295 3.3E-78 T 19-04-2016 ALIDE2_RS09325 6bb1d7402b4158b28a95703a3e77e210 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 319 1.3E-77 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS02575 5751a28600e6c0204ba803b16f8c6e30 266 PANTHER PTHR30502:SF0 1 266 4.6E-92 T 19-04-2016 ALIDE2_RS02575 5751a28600e6c0204ba803b16f8c6e30 266 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 17 245 2.3E-58 T 19-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ALIDE2_RS02575 5751a28600e6c0204ba803b16f8c6e30 266 Gene3D G3DSA:3.20.20.60 3 254 3.0E-81 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS02575 5751a28600e6c0204ba803b16f8c6e30 266 PANTHER PTHR30502 1 266 4.6E-92 T 19-04-2016 ALIDE2_RS02575 5751a28600e6c0204ba803b16f8c6e30 266 SUPERFAMILY SSF51621 2 254 1.5E-82 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS20765 d465ac21872e0d155dc00df418d73bbb 160 Gene3D G3DSA:2.40.50.180 55 93 7.0E-10 T 19-04-2016 ALIDE2_RS20765 d465ac21872e0d155dc00df418d73bbb 160 PANTHER PTHR22617 16 155 1.9E-46 T 19-04-2016 ALIDE2_RS20765 d465ac21872e0d155dc00df418d73bbb 160 Pfam PF01584 CheW-like domain 17 151 3.8E-36 T 19-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ALIDE2_RS20765 d465ac21872e0d155dc00df418d73bbb 160 SMART SM00260 13 150 2.0E-38 T 19-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ALIDE2_RS20765 d465ac21872e0d155dc00df418d73bbb 160 Gene3D G3DSA:2.30.30.40 94 144 1.4E-6 T 19-04-2016 ALIDE2_RS20765 d465ac21872e0d155dc00df418d73bbb 160 SUPERFAMILY SSF50341 16 152 1.22E-37 T 19-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ALIDE2_RS20265 93fb73e4c256d1efac99d8c438a412f3 564 Gene3D G3DSA:3.90.79.10 12 215 6.2E-20 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS20265 93fb73e4c256d1efac99d8c438a412f3 564 PANTHER PTHR23131 299 554 2.1E-48 T 19-04-2016 ALIDE2_RS20265 93fb73e4c256d1efac99d8c438a412f3 564 SUPERFAMILY SSF55811 11 103 2.39E-17 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS20265 93fb73e4c256d1efac99d8c438a412f3 564 SUPERFAMILY SSF55811 144 216 2.39E-17 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS20265 93fb73e4c256d1efac99d8c438a412f3 564 SMART SM00849 307 489 1.6E-23 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS20265 93fb73e4c256d1efac99d8c438a412f3 564 Gene3D G3DSA:3.60.15.10 286 516 1.7E-44 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS20265 93fb73e4c256d1efac99d8c438a412f3 564 SUPERFAMILY SSF56281 285 557 1.16E-46 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS20265 93fb73e4c256d1efac99d8c438a412f3 564 Pfam PF00753 Metallo-beta-lactamase superfamily 307 474 1.8E-15 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS05470 9ce7b18ee6be3dc95ac0064cb653ddd0 222 PANTHER PTHR22939:SF104 36 203 1.1E-44 T 19-04-2016 ALIDE2_RS05470 9ce7b18ee6be3dc95ac0064cb653ddd0 222 PANTHER PTHR22939 36 203 1.1E-44 T 19-04-2016 ALIDE2_RS04760 d6c234ca80b31c7adcbff95fff93d980 557 PANTHER PTHR11059 3 557 3.9E-155 T 19-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 ALIDE2_RS04760 d6c234ca80b31c7adcbff95fff93d980 557 Gene3D G3DSA:3.40.50.300 3 204 7.3E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04760 d6c234ca80b31c7adcbff95fff93d980 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 3 548 1.5E-150 T 19-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 ALIDE2_RS04760 d6c234ca80b31c7adcbff95fff93d980 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 505 5.0E-18 T 19-04-2016 IPR003395 RecF/RecN/SMC, N-terminal ALIDE2_RS04760 d6c234ca80b31c7adcbff95fff93d980 557 PIRSF PIRSF003128 2 553 4.9E-157 T 19-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 ALIDE2_RS04760 d6c234ca80b31c7adcbff95fff93d980 557 SUPERFAMILY SSF52540 1 197 7.68E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04760 d6c234ca80b31c7adcbff95fff93d980 557 SUPERFAMILY SSF52540 348 514 7.68E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04760 d6c234ca80b31c7adcbff95fff93d980 557 SUPERFAMILY SSF52540 285 320 7.68E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04760 d6c234ca80b31c7adcbff95fff93d980 557 Gene3D G3DSA:3.40.50.300 367 508 1.5E-9 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14410 fc9f3db83e3c43439d4c577ea4845afd 211 PANTHER PTHR35011 162 207 6.1E-34 T 19-04-2016 ALIDE2_RS14410 fc9f3db83e3c43439d4c577ea4845afd 211 PANTHER PTHR35011 5 143 6.1E-34 T 19-04-2016 ALIDE2_RS14410 fc9f3db83e3c43439d4c577ea4845afd 211 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 43 190 1.2E-30 T 19-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component ALIDE2_RS14410 fc9f3db83e3c43439d4c577ea4845afd 211 PANTHER PTHR35011:SF2 162 207 6.1E-34 T 19-04-2016 ALIDE2_RS14410 fc9f3db83e3c43439d4c577ea4845afd 211 PANTHER PTHR35011:SF2 5 143 6.1E-34 T 19-04-2016 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 SUPERFAMILY SSF82714 185 265 3.01E-16 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 PANTHER PTHR32063:SF19 2 1042 0.0 T 19-04-2016 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 SUPERFAMILY SSF82866 291 497 4.58E-42 T 19-04-2016 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 Pfam PF00873 AcrB/AcrD/AcrF family 13 1034 5.5E-237 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 Gene3D G3DSA:3.30.2090.10 184 265 2.1E-17 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 SUPERFAMILY SSF82693 137 182 6.8E-18 T 19-04-2016 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 SUPERFAMILY SSF82693 268 325 6.8E-18 T 19-04-2016 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 Gene3D G3DSA:3.30.70.1430 46 142 1.5E-23 T 19-04-2016 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 SUPERFAMILY SSF82693 46 129 7.85E-20 T 19-04-2016 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 Gene3D G3DSA:1.10.3850.10 273 499 2.0E-71 T 19-04-2016 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 Gene3D G3DSA:1.10.3850.10 807 1035 8.2E-57 T 19-04-2016 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 Gene3D G3DSA:3.30.2090.10 716 802 1.7E-17 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 SUPERFAMILY SSF82866 800 1036 1.7E-50 T 19-04-2016 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 SUPERFAMILY SSF82714 716 799 1.57E-16 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 PANTHER PTHR32063 2 1042 0.0 T 19-04-2016 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1038 0.0 T 19-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.1E-30 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 2.1E-30 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.1E-30 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 2.1E-30 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 2.1E-30 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 2.1E-30 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS13615 498ddb7aa03f9d156ed00518471ffb55 1059 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.1E-30 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS07340 7644273e6bd49261a762fb6d823edf1d 205 SUPERFAMILY SSF48498 89 202 8.56E-16 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS07340 7644273e6bd49261a762fb6d823edf1d 205 Gene3D G3DSA:1.10.10.60 4 64 4.2E-22 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS07340 7644273e6bd49261a762fb6d823edf1d 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 3.0E-10 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS07340 7644273e6bd49261a762fb6d823edf1d 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 3.0E-10 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS07340 7644273e6bd49261a762fb6d823edf1d 205 SUPERFAMILY SSF46689 10 85 1.3E-19 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS07340 7644273e6bd49261a762fb6d823edf1d 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 8.4E-19 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS07340 7644273e6bd49261a762fb6d823edf1d 205 PANTHER PTHR30055 2 198 2.7E-27 T 19-04-2016 ALIDE2_RS07340 7644273e6bd49261a762fb6d823edf1d 205 Gene3D G3DSA:1.10.357.10 65 202 3.9E-34 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS07340 7644273e6bd49261a762fb6d823edf1d 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 62 - T 19-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ALIDE2_RS12555 ff2cc0ef3ef3b1bb15300ba3bfa37f33 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 119 8.6E-19 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS12555 ff2cc0ef3ef3b1bb15300ba3bfa37f33 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 215 1.1E-21 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS12555 ff2cc0ef3ef3b1bb15300ba3bfa37f33 389 PIRSF PIRSF016578 7 383 7.3E-24 T 19-04-2016 ALIDE2_RS12555 ff2cc0ef3ef3b1bb15300ba3bfa37f33 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 127 139 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS12555 ff2cc0ef3ef3b1bb15300ba3bfa37f33 389 PANTHER PTHR10909 6 385 8.2E-124 T 19-04-2016 ALIDE2_RS12555 ff2cc0ef3ef3b1bb15300ba3bfa37f33 389 Gene3D G3DSA:1.20.140.10 225 381 1.3E-61 T 19-04-2016 ALIDE2_RS12555 ff2cc0ef3ef3b1bb15300ba3bfa37f33 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 379 5.2E-47 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS12555 ff2cc0ef3ef3b1bb15300ba3bfa37f33 389 Gene3D G3DSA:2.40.110.10 126 224 2.3E-29 T 19-04-2016 ALIDE2_RS12555 ff2cc0ef3ef3b1bb15300ba3bfa37f33 389 PANTHER PTHR10909:SF305 6 385 8.2E-124 T 19-04-2016 ALIDE2_RS12555 ff2cc0ef3ef3b1bb15300ba3bfa37f33 389 SUPERFAMILY SSF56645 6 231 9.56E-59 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS12555 ff2cc0ef3ef3b1bb15300ba3bfa37f33 389 SUPERFAMILY SSF47203 230 380 1.35E-52 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS12555 ff2cc0ef3ef3b1bb15300ba3bfa37f33 389 Gene3D G3DSA:1.10.540.10 8 118 1.4E-25 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS02080 1b1ab58c9ae8c72e3195a22849c892f5 231 PANTHER PTHR32071:SF17 1 118 2.2E-34 T 19-04-2016 ALIDE2_RS02080 1b1ab58c9ae8c72e3195a22849c892f5 231 Gene3D G3DSA:3.40.50.2300 1 126 1.3E-33 T 19-04-2016 ALIDE2_RS02080 1b1ab58c9ae8c72e3195a22849c892f5 231 SUPERFAMILY SSF46689 159 222 2.29E-13 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS02080 1b1ab58c9ae8c72e3195a22849c892f5 231 SMART SM00448 2 114 2.4E-31 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS02080 1b1ab58c9ae8c72e3195a22849c892f5 231 Pfam PF00072 Response regulator receiver domain 4 115 3.4E-26 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS02080 1b1ab58c9ae8c72e3195a22849c892f5 231 Pfam PF02954 Bacterial regulatory protein, Fis family 183 220 2.9E-5 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS02080 1b1ab58c9ae8c72e3195a22849c892f5 231 SUPERFAMILY SSF52172 1 124 3.98E-35 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS02080 1b1ab58c9ae8c72e3195a22849c892f5 231 Gene3D G3DSA:1.10.10.60 167 221 1.1E-7 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS02080 1b1ab58c9ae8c72e3195a22849c892f5 231 PANTHER PTHR32071 1 118 2.2E-34 T 19-04-2016 ALIDE2_RS03930 97e0d2e85cbadf34a600b2b37a84d4aa 332 PANTHER PTHR19372 16 327 2.3E-130 T 19-04-2016 ALIDE2_RS03930 97e0d2e85cbadf34a600b2b37a84d4aa 332 Gene3D G3DSA:3.90.420.10 83 329 1.9E-70 T 19-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 ALIDE2_RS03930 97e0d2e85cbadf34a600b2b37a84d4aa 332 PANTHER PTHR19372:SF1 16 327 2.3E-130 T 19-04-2016 ALIDE2_RS03930 97e0d2e85cbadf34a600b2b37a84d4aa 332 SUPERFAMILY SSF56524 76 328 2.62E-92 T 19-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 ALIDE2_RS03930 97e0d2e85cbadf34a600b2b37a84d4aa 332 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 5 332 58.636 T 19-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 ALIDE2_RS03930 97e0d2e85cbadf34a600b2b37a84d4aa 332 Pfam PF00174 Oxidoreductase molybdopterin binding domain 111 266 2.1E-30 T 19-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 ALIDE2_RS12035 09c5129cab74eca3ad6f3a6d6f8f7504 208 SUPERFAMILY SSF52172 7 130 4.55E-33 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS12035 09c5129cab74eca3ad6f3a6d6f8f7504 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 1.4E-19 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS12035 09c5129cab74eca3ad6f3a6d6f8f7504 208 PANTHER PTHR26402 8 201 1.1E-64 T 19-04-2016 ALIDE2_RS12035 09c5129cab74eca3ad6f3a6d6f8f7504 208 Pfam PF00072 Response regulator receiver domain 10 118 4.8E-27 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS12035 09c5129cab74eca3ad6f3a6d6f8f7504 208 Gene3D G3DSA:3.40.50.2300 8 151 1.5E-33 T 19-04-2016 ALIDE2_RS12035 09c5129cab74eca3ad6f3a6d6f8f7504 208 Gene3D G3DSA:1.10.10.10 152 203 1.4E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12035 09c5129cab74eca3ad6f3a6d6f8f7504 208 SMART SM00421 143 200 2.1E-19 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS12035 09c5129cab74eca3ad6f3a6d6f8f7504 208 SUPERFAMILY SSF46894 136 202 5.44E-19 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS12035 09c5129cab74eca3ad6f3a6d6f8f7504 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 5.2E-13 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS12035 09c5129cab74eca3ad6f3a6d6f8f7504 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 5.2E-13 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS12035 09c5129cab74eca3ad6f3a6d6f8f7504 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 5.2E-13 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS12035 09c5129cab74eca3ad6f3a6d6f8f7504 208 SMART SM00448 8 119 1.5E-27 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS12035 09c5129cab74eca3ad6f3a6d6f8f7504 208 PANTHER PTHR26402:SF613 8 201 1.1E-64 T 19-04-2016 ALIDE2_RS12035 09c5129cab74eca3ad6f3a6d6f8f7504 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS04375 51c12a6ee071bd47c69eb3917005c578 228 SMART SM00530 21 76 1.0E-6 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS04375 51c12a6ee071bd47c69eb3917005c578 228 Gene3D G3DSA:1.10.260.40 16 71 3.7E-11 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS04375 51c12a6ee071bd47c69eb3917005c578 228 Pfam PF13560 Helix-turn-helix domain 17 75 2.0E-9 T 19-04-2016 ALIDE2_RS04375 51c12a6ee071bd47c69eb3917005c578 228 SUPERFAMILY SSF47413 12 74 2.76E-12 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS05295 0bdaf7aca2e74c7ff83acc38400cf805 518 PANTHER PTHR12083:SF8 13 371 5.6E-106 T 19-04-2016 ALIDE2_RS05295 0bdaf7aca2e74c7ff83acc38400cf805 518 PANTHER PTHR12083 399 499 5.6E-106 T 19-04-2016 ALIDE2_RS05295 0bdaf7aca2e74c7ff83acc38400cf805 518 Gene3D G3DSA:3.90.1200.10 138 298 5.9E-8 T 19-04-2016 ALIDE2_RS05295 0bdaf7aca2e74c7ff83acc38400cf805 518 SUPERFAMILY SSF52540 337 498 2.19E-18 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05295 0bdaf7aca2e74c7ff83acc38400cf805 518 Pfam PF13671 AAA domain 339 487 1.0E-32 T 19-04-2016 ALIDE2_RS05295 0bdaf7aca2e74c7ff83acc38400cf805 518 Gene3D G3DSA:3.40.50.300 337 478 1.7E-17 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05295 0bdaf7aca2e74c7ff83acc38400cf805 518 PANTHER PTHR12083:SF8 399 499 5.6E-106 T 19-04-2016 ALIDE2_RS05295 0bdaf7aca2e74c7ff83acc38400cf805 518 PANTHER PTHR12083 13 371 5.6E-106 T 19-04-2016 ALIDE2_RS05295 0bdaf7aca2e74c7ff83acc38400cf805 518 SUPERFAMILY SSF56112 37 313 2.89E-16 T 19-04-2016 IPR011009 Protein kinase-like domain ALIDE2_RS13240 331770656953c2a4af5ef3075d91c552 110 PANTHER PTHR10438 4 107 6.2E-40 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ALIDE2_RS13240 331770656953c2a4af5ef3075d91c552 110 TIGRFAM TIGR01068 thioredoxin: thioredoxin 10 108 1.2E-39 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ALIDE2_RS13240 331770656953c2a4af5ef3075d91c552 110 ProSitePatterns PS00194 Thioredoxin family active site. 26 44 - T 19-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 ALIDE2_RS13240 331770656953c2a4af5ef3075d91c552 110 PRINTS PR00421 Thioredoxin family signature 33 42 8.0E-10 T 19-04-2016 ALIDE2_RS13240 331770656953c2a4af5ef3075d91c552 110 PRINTS PR00421 Thioredoxin family signature 73 84 8.0E-10 T 19-04-2016 ALIDE2_RS13240 331770656953c2a4af5ef3075d91c552 110 PRINTS PR00421 Thioredoxin family signature 25 33 8.0E-10 T 19-04-2016 ALIDE2_RS13240 331770656953c2a4af5ef3075d91c552 110 Pfam PF00085 Thioredoxin 6 107 1.6E-34 T 19-04-2016 IPR013766 Thioredoxin domain GO:0045454 ALIDE2_RS13240 331770656953c2a4af5ef3075d91c552 110 Gene3D G3DSA:3.40.30.10 3 109 1.5E-39 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS13240 331770656953c2a4af5ef3075d91c552 110 SUPERFAMILY SSF52833 6 109 3.82E-40 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS13240 331770656953c2a4af5ef3075d91c552 110 PIRSF PIRSF000077 3 109 2.0E-44 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ALIDE2_RS19865 22dc548087f01fcc4f19db63304ea56f 264 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 4 248 40.61 T 19-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 ALIDE2_RS19865 22dc548087f01fcc4f19db63304ea56f 264 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 238 2.2E-66 T 19-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 ALIDE2_RS19865 22dc548087f01fcc4f19db63304ea56f 264 Gene3D G3DSA:3.20.20.70 4 250 2.1E-101 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS19865 22dc548087f01fcc4f19db63304ea56f 264 PANTHER PTHR21139 1 264 1.4E-116 T 19-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 ALIDE2_RS19865 22dc548087f01fcc4f19db63304ea56f 264 SUPERFAMILY SSF51351 3 247 4.06E-89 T 19-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 ALIDE2_RS19865 22dc548087f01fcc4f19db63304ea56f 264 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 19-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 ALIDE2_RS19865 22dc548087f01fcc4f19db63304ea56f 264 Pfam PF00121 Triosephosphate isomerase 6 245 1.4E-90 T 19-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 ALIDE2_RS22455 8f05cf36110954156c62a3aef01be692 158 SUPERFAMILY SSF55136 12 153 3.14E-17 T 19-04-2016 IPR011256 Regulatory factor, effector binding domain ALIDE2_RS22455 8f05cf36110954156c62a3aef01be692 158 Pfam PF06445 GyrI-like small molecule binding domain 38 153 4.6E-12 T 19-04-2016 IPR029442 GyrI-like small molecule binding domain ALIDE2_RS22455 8f05cf36110954156c62a3aef01be692 158 Gene3D G3DSA:3.20.80.10 7 153 5.9E-15 T 19-04-2016 IPR011256 Regulatory factor, effector binding domain ALIDE2_RS22455 8f05cf36110954156c62a3aef01be692 158 SMART SM00871 3 154 1.9E-12 T 19-04-2016 IPR010499 Bacterial transcription activator, effector binding ALIDE2_RS22010 187f16a17b43d308a3bbe8e6d1a5fdf9 445 PANTHER PTHR11958 15 431 1.1E-239 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS22010 187f16a17b43d308a3bbe8e6d1a5fdf9 445 PRINTS PR00173 Glutamate-aspartate symporter signature 85 110 9.1E-25 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS22010 187f16a17b43d308a3bbe8e6d1a5fdf9 445 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 9.1E-25 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS22010 187f16a17b43d308a3bbe8e6d1a5fdf9 445 PRINTS PR00173 Glutamate-aspartate symporter signature 18 38 9.1E-25 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS22010 187f16a17b43d308a3bbe8e6d1a5fdf9 445 PRINTS PR00173 Glutamate-aspartate symporter signature 156 178 9.1E-25 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS22010 187f16a17b43d308a3bbe8e6d1a5fdf9 445 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 9.1E-25 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS22010 187f16a17b43d308a3bbe8e6d1a5fdf9 445 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 13 439 37.616 T 19-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 ALIDE2_RS22010 187f16a17b43d308a3bbe8e6d1a5fdf9 445 PANTHER PTHR11958:SF49 15 431 1.1E-239 T 19-04-2016 ALIDE2_RS22010 187f16a17b43d308a3bbe8e6d1a5fdf9 445 SUPERFAMILY SSF118215 20 413 4.97E-114 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS22010 187f16a17b43d308a3bbe8e6d1a5fdf9 445 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 47 62 - T 19-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS22010 187f16a17b43d308a3bbe8e6d1a5fdf9 445 Pfam PF00375 Sodium:dicarboxylate symporter family 20 412 2.1E-106 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS22010 187f16a17b43d308a3bbe8e6d1a5fdf9 445 Gene3D G3DSA:1.10.3860.10 18 417 3.1E-113 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS22010 187f16a17b43d308a3bbe8e6d1a5fdf9 445 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 19-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS06295 a293a25e016c867a99f4800728351ffb 317 SUPERFAMILY SSF52151 5 122 8.37E-75 T 19-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 ALIDE2_RS06295 a293a25e016c867a99f4800728351ffb 317 SUPERFAMILY SSF52151 196 315 8.37E-75 T 19-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 ALIDE2_RS06295 a293a25e016c867a99f4800728351ffb 317 Gene3D G3DSA:3.40.366.10 3 122 2.4E-65 T 19-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 ALIDE2_RS06295 a293a25e016c867a99f4800728351ffb 317 Gene3D G3DSA:3.40.366.10 203 296 2.4E-65 T 19-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 ALIDE2_RS06295 a293a25e016c867a99f4800728351ffb 317 PANTHER PTHR10982 4 312 6.1E-129 T 19-04-2016 ALIDE2_RS06295 a293a25e016c867a99f4800728351ffb 317 Gene3D G3DSA:3.30.70.250 125 202 3.8E-27 T 19-04-2016 ALIDE2_RS06295 a293a25e016c867a99f4800728351ffb 317 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 4 297 3.9E-97 T 19-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 ALIDE2_RS06295 a293a25e016c867a99f4800728351ffb 317 Pfam PF00698 Acyl transferase domain 7 284 6.2E-32 T 19-04-2016 IPR014043 Acyl transferase ALIDE2_RS06295 a293a25e016c867a99f4800728351ffb 317 PIRSF PIRSF000446 1 317 3.5E-100 T 19-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 ALIDE2_RS06295 a293a25e016c867a99f4800728351ffb 317 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 306 1.7E-35 T 19-04-2016 IPR020801 Polyketide synthase, acyl transferase domain ALIDE2_RS06295 a293a25e016c867a99f4800728351ffb 317 SUPERFAMILY SSF55048 129 203 5.75E-14 T 19-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 ALIDE2_RS17765 24f1f23d2d8fb61224e77878e7728e3e 364 Gene3D G3DSA:2.40.370.10 30 225 1.6E-67 T 19-04-2016 IPR023374 AttH-like domain ALIDE2_RS17765 24f1f23d2d8fb61224e77878e7728e3e 364 Pfam PF07143 CrtC N-terminal lipocalin domain 42 223 1.4E-53 T 19-04-2016 IPR010791 AttH domain ALIDE2_RS17765 24f1f23d2d8fb61224e77878e7728e3e 364 Gene3D G3DSA:2.40.370.10 228 362 4.0E-42 T 19-04-2016 IPR023374 AttH-like domain ALIDE2_RS17765 24f1f23d2d8fb61224e77878e7728e3e 364 SUPERFAMILY SSF159245 21 357 2.22E-98 T 19-04-2016 ALIDE2_RS17765 24f1f23d2d8fb61224e77878e7728e3e 364 PANTHER PTHR38591 20 362 8.9E-69 T 19-04-2016 ALIDE2_RS17765 24f1f23d2d8fb61224e77878e7728e3e 364 Pfam PF17186 Lipocalin-like domain 227 357 3.9E-35 T 19-04-2016 IPR033451 AttH, lipocalin-like domain ALIDE2_RS13770 5a3c802c5a1957199ba46aed2895e8b2 259 TIGRFAM TIGR03742 PRTRC_F: PRTRC system protein F 12 259 9.4E-67 T 19-04-2016 IPR022283 ParB-related, ThiF-related cassette, protein F ALIDE2_RS13770 5a3c802c5a1957199ba46aed2895e8b2 259 Pfam PF14456 Alpha-helical domain 2 62 259 1.1E-48 T 19-04-2016 ALIDE2_RS15895 2c1d2d9b9d0c49483bdf7316fefef907 274 SUPERFAMILY SSF109604 4 258 8.48E-56 T 19-04-2016 ALIDE2_RS15895 2c1d2d9b9d0c49483bdf7316fefef907 274 Pfam PF08668 HDOD domain 13 205 2.7E-40 T 19-04-2016 IPR013976 Metal-dependent hydrolase HDOD ALIDE2_RS15895 2c1d2d9b9d0c49483bdf7316fefef907 274 Gene3D G3DSA:1.10.3150.10 3 257 2.2E-56 T 19-04-2016 IPR013976 Metal-dependent hydrolase HDOD ALIDE2_RS15895 2c1d2d9b9d0c49483bdf7316fefef907 274 PANTHER PTHR33525:SF3 1 236 1.1E-30 T 19-04-2016 ALIDE2_RS15895 2c1d2d9b9d0c49483bdf7316fefef907 274 PANTHER PTHR33525 1 236 1.1E-30 T 19-04-2016 ALIDE2_RS14090 83c605a31f3ddd01c9f465fe1e220efa 237 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 159 235 2.1E-18 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 ALIDE2_RS14090 83c605a31f3ddd01c9f465fe1e220efa 237 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 157 235 5.9E-22 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 ALIDE2_RS14090 83c605a31f3ddd01c9f465fe1e220efa 237 PRINTS PR01217 Proline rich extensin signature 123 140 1.6E-11 T 19-04-2016 ALIDE2_RS14090 83c605a31f3ddd01c9f465fe1e220efa 237 PRINTS PR01217 Proline rich extensin signature 58 70 1.6E-11 T 19-04-2016 ALIDE2_RS14090 83c605a31f3ddd01c9f465fe1e220efa 237 PRINTS PR01217 Proline rich extensin signature 105 121 1.6E-11 T 19-04-2016 ALIDE2_RS14090 83c605a31f3ddd01c9f465fe1e220efa 237 PRINTS PR01217 Proline rich extensin signature 73 94 1.6E-11 T 19-04-2016 ALIDE2_RS14090 83c605a31f3ddd01c9f465fe1e220efa 237 PANTHER PTHR33446:SF2 38 237 3.1E-15 T 19-04-2016 ALIDE2_RS14090 83c605a31f3ddd01c9f465fe1e220efa 237 SUPERFAMILY SSF74653 152 233 3.53E-23 T 19-04-2016 ALIDE2_RS14090 83c605a31f3ddd01c9f465fe1e220efa 237 PANTHER PTHR33446 38 237 3.1E-15 T 19-04-2016 ALIDE2_RS14090 83c605a31f3ddd01c9f465fe1e220efa 237 Gene3D G3DSA:3.30.1150.10 122 236 1.6E-13 T 19-04-2016 ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 Gene3D G3DSA:3.40.50.300 3 110 5.4E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 Gene3D G3DSA:3.40.50.300 239 325 5.4E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 Pfam PF07724 AAA domain (Cdc48 subfamily) 178 323 4.1E-42 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 329 398 5.1E-5 T 19-04-2016 IPR019489 Clp ATPase, C-terminal ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 Gene3D G3DSA:1.10.8.60 328 437 1.5E-32 T 19-04-2016 ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 99 4.1E-6 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 PANTHER PTHR11262 212 437 7.7E-199 T 19-04-2016 ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 PANTHER PTHR11262 1 105 7.7E-199 T 19-04-2016 ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 437 42.786 T 19-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 SMART SM00382 49 326 1.4E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 437 1.0E-203 T 19-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 SUPERFAMILY SSF52540 3 435 9.34E-88 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 PANTHER PTHR11262:SF3 212 437 7.7E-199 T 19-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 PANTHER PTHR11262:SF3 1 105 7.7E-199 T 19-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 SMART SM01086 329 425 2.5E-21 T 19-04-2016 IPR019489 Clp ATPase, C-terminal ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 Gene3D G3DSA:1.10.8.10 207 237 3.0E-29 T 19-04-2016 ALIDE2_RS20170 dc36487ccd04c48e17b06596c7daa5f4 437 Gene3D G3DSA:1.10.8.10 111 171 3.0E-29 T 19-04-2016 ALIDE2_RS01860 0d6ec0ac771604404e30b13e13f932cd 98 PANTHER PTHR38036:SF1 8 98 2.3E-22 T 19-04-2016 ALIDE2_RS01860 0d6ec0ac771604404e30b13e13f932cd 98 Pfam PF04359 Protein of unknown function (DUF493) 16 98 1.7E-30 T 19-04-2016 IPR007454 Uncharacterised protein family UPF0250 ALIDE2_RS01860 0d6ec0ac771604404e30b13e13f932cd 98 PANTHER PTHR38036 8 98 2.3E-22 T 19-04-2016 ALIDE2_RS01860 0d6ec0ac771604404e30b13e13f932cd 98 Gene3D G3DSA:3.30.70.1460 12 98 4.0E-32 T 19-04-2016 IPR027471 YbeD-like domain ALIDE2_RS01860 0d6ec0ac771604404e30b13e13f932cd 98 SUPERFAMILY SSF117991 12 98 3.66E-27 T 19-04-2016 IPR027471 YbeD-like domain ALIDE2_RS01860 0d6ec0ac771604404e30b13e13f932cd 98 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 10 98 22.068 T 19-04-2016 IPR007454 Uncharacterised protein family UPF0250 ALIDE2_RS10735 9898a2ede6b843f556aeb5f399f84783 538 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 538 53.782 T 19-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 ALIDE2_RS10735 9898a2ede6b843f556aeb5f399f84783 538 SUPERFAMILY SSF52317 3 236 2.93E-52 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS10735 9898a2ede6b843f556aeb5f399f84783 538 PANTHER PTHR11922 1 535 4.8E-269 T 19-04-2016 ALIDE2_RS10735 9898a2ede6b843f556aeb5f399f84783 538 SUPERFAMILY SSF54810 411 538 1.44E-46 T 19-04-2016 ALIDE2_RS10735 9898a2ede6b843f556aeb5f399f84783 538 Pfam PF02540 NAD synthase 222 253 1.8E-6 T 19-04-2016 IPR022310 NAD/GMP synthase ALIDE2_RS10735 9898a2ede6b843f556aeb5f399f84783 538 SUPERFAMILY SSF52402 196 426 3.53E-57 T 19-04-2016 ALIDE2_RS10735 9898a2ede6b843f556aeb5f399f84783 538 Gene3D G3DSA:3.30.300.10 407 538 4.9E-52 T 19-04-2016 ALIDE2_RS10735 9898a2ede6b843f556aeb5f399f84783 538 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 203 1.5E-67 T 19-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 ALIDE2_RS10735 9898a2ede6b843f556aeb5f399f84783 538 Pfam PF00117 Glutamine amidotransferase class-I 8 198 8.3E-32 T 19-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 ALIDE2_RS10735 9898a2ede6b843f556aeb5f399f84783 538 PANTHER PTHR11922:SF2 1 535 4.8E-269 T 19-04-2016 ALIDE2_RS10735 9898a2ede6b843f556aeb5f399f84783 538 Gene3D G3DSA:3.40.50.880 2 222 2.7E-55 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS10735 9898a2ede6b843f556aeb5f399f84783 538 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 538 3.0E-140 T 19-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 ALIDE2_RS10735 9898a2ede6b843f556aeb5f399f84783 538 Gene3D G3DSA:3.40.50.620 223 405 6.2E-55 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS10735 9898a2ede6b843f556aeb5f399f84783 538 Pfam PF00958 GMP synthase C terminal domain 452 537 4.7E-42 T 19-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 ALIDE2_RS05760 5f04da06d3c283983124b6f6cda931ea 381 Gene3D G3DSA:2.40.110.10 125 213 8.2E-12 T 19-04-2016 ALIDE2_RS05760 5f04da06d3c283983124b6f6cda931ea 381 Gene3D G3DSA:1.10.540.10 11 119 1.5E-14 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS05760 5f04da06d3c283983124b6f6cda931ea 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 226 372 2.2E-23 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS05760 5f04da06d3c283983124b6f6cda931ea 381 Gene3D G3DSA:1.20.140.10 214 373 2.1E-33 T 19-04-2016 ALIDE2_RS05760 5f04da06d3c283983124b6f6cda931ea 381 SUPERFAMILY SSF47203 226 373 8.7E-33 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS05760 5f04da06d3c283983124b6f6cda931ea 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 119 1.8E-14 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS05760 5f04da06d3c283983124b6f6cda931ea 381 PANTHER PTHR10909 5 355 2.4E-53 T 19-04-2016 ALIDE2_RS05760 5f04da06d3c283983124b6f6cda931ea 381 PANTHER PTHR10909:SF302 5 355 2.4E-53 T 19-04-2016 ALIDE2_RS05760 5f04da06d3c283983124b6f6cda931ea 381 SUPERFAMILY SSF56645 11 222 5.89E-36 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS06220 998845a58e18596805af3ddaddd15db0 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 333 517 2.2E-49 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS06220 998845a58e18596805af3ddaddd15db0 520 SMART SM00086 80 121 1.6E-4 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS06220 998845a58e18596805af3ddaddd15db0 520 Gene3D G3DSA:1.10.287.950 286 489 3.3E-53 T 19-04-2016 ALIDE2_RS06220 998845a58e18596805af3ddaddd15db0 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 114 1.3E-12 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS06220 998845a58e18596805af3ddaddd15db0 520 Gene3D G3DSA:3.30.450.20 21 114 8.5E-23 T 19-04-2016 ALIDE2_RS06220 998845a58e18596805af3ddaddd15db0 520 SUPERFAMILY SSF55785 21 114 1.55E-25 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS06220 998845a58e18596805af3ddaddd15db0 520 SMART SM00283 271 518 1.3E-66 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS06220 998845a58e18596805af3ddaddd15db0 520 PANTHER PTHR32089:SF63 193 520 1.4E-93 T 19-04-2016 ALIDE2_RS06220 998845a58e18596805af3ddaddd15db0 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 292 321 9.0E-45 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS06220 998845a58e18596805af3ddaddd15db0 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 9.0E-45 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS06220 998845a58e18596805af3ddaddd15db0 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 9.0E-45 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS06220 998845a58e18596805af3ddaddd15db0 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 446 475 9.0E-45 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS06220 998845a58e18596805af3ddaddd15db0 520 Pfam PF08447 PAS fold 31 114 2.8E-14 T 19-04-2016 IPR013655 PAS fold-3 GO:0005515 ALIDE2_RS06220 998845a58e18596805af3ddaddd15db0 520 PANTHER PTHR32089 193 520 1.4E-93 T 19-04-2016 ALIDE2_RS06220 998845a58e18596805af3ddaddd15db0 520 SUPERFAMILY SSF58104 242 518 4.71E-61 T 19-04-2016 ALIDE2_RS23030 2b1f5f0471104b5c9f8907d7851d9cff 161 PANTHER PTHR22769 1 121 6.0E-18 T 19-04-2016 ALIDE2_RS23030 2b1f5f0471104b5c9f8907d7851d9cff 161 Pfam PF00293 NUDIX domain 7 123 2.3E-13 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ALIDE2_RS23030 2b1f5f0471104b5c9f8907d7851d9cff 161 Gene3D G3DSA:3.90.79.10 3 151 5.4E-28 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS23030 2b1f5f0471104b5c9f8907d7851d9cff 161 SUPERFAMILY SSF55811 3 146 3.52E-25 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS15345 7882155fe5f3fba644f782b6cbed12bc 221 Pfam PF03458 UPF0126 domain 107 180 8.0E-21 T 19-04-2016 IPR005115 Uncharacterised domain UPF0126 ALIDE2_RS15345 7882155fe5f3fba644f782b6cbed12bc 221 Pfam PF03458 UPF0126 domain 22 95 7.5E-19 T 19-04-2016 IPR005115 Uncharacterised domain UPF0126 ALIDE2_RS15345 7882155fe5f3fba644f782b6cbed12bc 221 PANTHER PTHR30506 13 219 3.0E-94 T 19-04-2016 ALIDE2_RS15345 7882155fe5f3fba644f782b6cbed12bc 221 PANTHER PTHR30506:SF2 13 219 3.0E-94 T 19-04-2016 ALIDE2_RS12330 c4cc7cff4e56c320bc69cd98570a9409 374 SUPERFAMILY SSF51735 13 187 7.68E-24 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12330 c4cc7cff4e56c320bc69cd98570a9409 374 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 16 110 3.5E-15 T 19-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 ALIDE2_RS12330 c4cc7cff4e56c320bc69cd98570a9409 374 SUPERFAMILY SSF55347 133 367 7.19E-54 T 19-04-2016 ALIDE2_RS12330 c4cc7cff4e56c320bc69cd98570a9409 374 Gene3D G3DSA:3.30.360.10 144 265 3.1E-18 T 19-04-2016 ALIDE2_RS12330 c4cc7cff4e56c320bc69cd98570a9409 374 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 132 354 4.4E-12 T 19-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal ALIDE2_RS12330 c4cc7cff4e56c320bc69cd98570a9409 374 Gene3D G3DSA:3.40.50.720 16 143 5.4E-12 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04585 d72e85ce57f7aaf15cde7b80d8d57092 521 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 5 444 9.2E-168 T 19-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 ALIDE2_RS04585 d72e85ce57f7aaf15cde7b80d8d57092 521 PANTHER PTHR10566 10 458 2.9E-218 T 19-04-2016 ALIDE2_RS04585 d72e85ce57f7aaf15cde7b80d8d57092 521 PANTHER PTHR10566:SF79 10 458 2.9E-218 T 19-04-2016 ALIDE2_RS04585 d72e85ce57f7aaf15cde7b80d8d57092 521 Gene3D G3DSA:3.90.1200.10 253 314 4.3E-4 T 19-04-2016 ALIDE2_RS04585 d72e85ce57f7aaf15cde7b80d8d57092 521 Pfam PF03109 ABC1 family 109 229 4.9E-30 T 19-04-2016 IPR004147 UbiB domain ALIDE2_RS04585 d72e85ce57f7aaf15cde7b80d8d57092 521 SUPERFAMILY SSF56112 192 435 5.67E-37 T 19-04-2016 IPR011009 Protein kinase-like domain ALIDE2_RS04585 d72e85ce57f7aaf15cde7b80d8d57092 521 SUPERFAMILY SSF56112 90 157 5.67E-37 T 19-04-2016 IPR011009 Protein kinase-like domain ALIDE2_RS04585 d72e85ce57f7aaf15cde7b80d8d57092 521 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 517 50.208 T 19-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 ALIDE2_RS08335 561e1763f62a57ed5e131868994c602e 594 PANTHER PTHR10909 1 471 1.7E-190 T 19-04-2016 ALIDE2_RS08335 561e1763f62a57ed5e131868994c602e 594 SUPERFAMILY SSF47203 281 456 4.03E-47 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS08335 561e1763f62a57ed5e131868994c602e 594 Gene3D G3DSA:2.40.110.10 161 265 6.8E-25 T 19-04-2016 ALIDE2_RS08335 561e1763f62a57ed5e131868994c602e 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 156 1.4E-12 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS08335 561e1763f62a57ed5e131868994c602e 594 Gene3D G3DSA:1.10.540.10 38 159 5.6E-17 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS08335 561e1763f62a57ed5e131868994c602e 594 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 33 6.0E-6 T 19-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria ALIDE2_RS08335 561e1763f62a57ed5e131868994c602e 594 PANTHER PTHR10909:SF296 1 471 1.7E-190 T 19-04-2016 ALIDE2_RS08335 561e1763f62a57ed5e131868994c602e 594 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 465 589 2.7E-26 T 19-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain ALIDE2_RS08335 561e1763f62a57ed5e131868994c602e 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 446 1.1E-27 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS08335 561e1763f62a57ed5e131868994c602e 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 269 3.3E-14 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS08335 561e1763f62a57ed5e131868994c602e 594 SUPERFAMILY SSF56645 38 280 2.88E-56 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS08335 561e1763f62a57ed5e131868994c602e 594 Gene3D G3DSA:1.20.140.10 266 456 6.3E-54 T 19-04-2016 ALIDE2_RS19025 093e57635875563f77df27b10f49afb5 193 SUPERFAMILY SSF55846 11 184 3.8E-61 T 19-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 ALIDE2_RS19025 093e57635875563f77df27b10f49afb5 193 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 35 173 1.2E-20 T 19-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 ALIDE2_RS19025 093e57635875563f77df27b10f49afb5 193 SMART SM00644 24 172 2.5E-43 T 19-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 ALIDE2_RS19025 093e57635875563f77df27b10f49afb5 193 PANTHER PTHR30417 14 185 1.1E-50 T 19-04-2016 ALIDE2_RS19025 093e57635875563f77df27b10f49afb5 193 PANTHER PTHR30417:SF4 14 185 1.1E-50 T 19-04-2016 ALIDE2_RS19025 093e57635875563f77df27b10f49afb5 193 Gene3D G3DSA:3.40.80.10 12 186 4.8E-64 T 19-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 ALIDE2_RS18235 25ae79bd6edb09b87ef7554abccb5c0f 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 17 108 1.7E-28 T 19-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 ALIDE2_RS18235 25ae79bd6edb09b87ef7554abccb5c0f 112 PANTHER PTHR12599 17 111 1.5E-27 T 19-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 ALIDE2_RS18235 25ae79bd6edb09b87ef7554abccb5c0f 112 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 15 110 22.507 T 19-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 ALIDE2_RS18235 25ae79bd6edb09b87ef7554abccb5c0f 112 SUPERFAMILY SSF55248 17 110 4.45E-31 T 19-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 ALIDE2_RS18235 25ae79bd6edb09b87ef7554abccb5c0f 112 Gene3D G3DSA:3.30.1360.20 16 110 7.2E-30 T 19-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 ALIDE2_RS04095 06470baafb768d1610c7e28f847ccbb3 90 Pfam PF13466 STAS domain 2 83 3.0E-20 T 19-04-2016 IPR002645 STAS domain ALIDE2_RS04095 06470baafb768d1610c7e28f847ccbb3 90 SUPERFAMILY SSF52091 2 87 1.47E-10 T 19-04-2016 IPR002645 STAS domain ALIDE2_RS04095 06470baafb768d1610c7e28f847ccbb3 90 Gene3D G3DSA:3.30.750.24 3 87 1.5E-10 T 19-04-2016 IPR002645 STAS domain ALIDE2_RS04365 9d354b75864e77af3aec1ccd88a142da 163 Gene3D G3DSA:1.10.260.40 6 61 1.5E-8 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS04365 9d354b75864e77af3aec1ccd88a142da 163 SMART SM00530 9 65 3.4E-6 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS04365 9d354b75864e77af3aec1ccd88a142da 163 SUPERFAMILY SSF47413 3 61 2.25E-10 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS04365 9d354b75864e77af3aec1ccd88a142da 163 Pfam PF01381 Helix-turn-helix 12 60 8.4E-8 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS19300 1ffbd0353dec0ca45cbb2496e396257b 431 Gene3D G3DSA:2.30.40.10 2 69 1.5E-12 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ALIDE2_RS19300 1ffbd0353dec0ca45cbb2496e396257b 431 Gene3D G3DSA:3.20.20.140 70 383 7.9E-80 T 19-04-2016 ALIDE2_RS19300 1ffbd0353dec0ca45cbb2496e396257b 431 Pfam PF07969 Amidohydrolase family 69 427 1.0E-9 T 19-04-2016 IPR013108 Amidohydrolase 3 ALIDE2_RS19300 1ffbd0353dec0ca45cbb2496e396257b 431 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 23 429 5.2E-84 T 19-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS19300 1ffbd0353dec0ca45cbb2496e396257b 431 PANTHER PTHR11647 1 431 7.7E-115 T 19-04-2016 ALIDE2_RS19300 1ffbd0353dec0ca45cbb2496e396257b 431 PANTHER PTHR11647:SF70 1 431 7.7E-115 T 19-04-2016 ALIDE2_RS19300 1ffbd0353dec0ca45cbb2496e396257b 431 SUPERFAMILY SSF51338 1 55 1.87E-26 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ALIDE2_RS19300 1ffbd0353dec0ca45cbb2496e396257b 431 SUPERFAMILY SSF51338 373 430 1.87E-26 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ALIDE2_RS19300 1ffbd0353dec0ca45cbb2496e396257b 431 SUPERFAMILY SSF51556 56 362 1.01E-78 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS19300 1ffbd0353dec0ca45cbb2496e396257b 431 Gene3D G3DSA:2.30.40.10 384 431 7.5E-5 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ALIDE2_RS13935 4c5e881a9047843b41f39e9a22296057 281 Pfam PF13098 Thioredoxin-like domain 144 263 1.6E-26 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS13935 4c5e881a9047843b41f39e9a22296057 281 Pfam PF10411 Disulfide bond isomerase protein N-terminus 48 98 1.1E-13 T 19-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal ALIDE2_RS13935 4c5e881a9047843b41f39e9a22296057 281 SUPERFAMILY SSF52833 128 266 7.49E-30 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS13935 4c5e881a9047843b41f39e9a22296057 281 SUPERFAMILY SSF54423 51 101 2.16E-9 T 19-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal ALIDE2_RS13935 4c5e881a9047843b41f39e9a22296057 281 PANTHER PTHR35272 15 274 1.3E-32 T 19-04-2016 ALIDE2_RS13935 4c5e881a9047843b41f39e9a22296057 281 Gene3D G3DSA:3.40.30.10 140 272 1.3E-33 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS13935 4c5e881a9047843b41f39e9a22296057 281 Gene3D G3DSA:3.10.450.70 51 102 2.7E-8 T 19-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal ALIDE2_RS21015 9646aa8d8548053e19bc2eec2433958f 331 Pfam PF03060 Nitronate monooxygenase 12 322 9.0E-45 T 19-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ALIDE2_RS21015 9646aa8d8548053e19bc2eec2433958f 331 PANTHER PTHR32332 7 331 1.1E-67 T 19-04-2016 ALIDE2_RS21015 9646aa8d8548053e19bc2eec2433958f 331 SUPERFAMILY SSF51412 8 329 7.94E-52 T 19-04-2016 ALIDE2_RS21015 9646aa8d8548053e19bc2eec2433958f 331 Gene3D G3DSA:3.20.20.70 8 318 3.2E-52 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS18520 b30df8b7d7f5aa7707a87c7f83f0aa2a 503 PANTHER PTHR35342 2 503 7.7E-285 T 19-04-2016 ALIDE2_RS18520 b30df8b7d7f5aa7707a87c7f83f0aa2a 503 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 441 1.2E-149 T 19-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane ALIDE2_RS18520 b30df8b7d7f5aa7707a87c7f83f0aa2a 503 PANTHER PTHR35342:SF2 2 503 7.7E-285 T 19-04-2016 ALIDE2_RS02250 6685a57b20d9e4b2a4d86a00c3ae7673 347 PANTHER PTHR30486 2 345 9.1E-187 T 19-04-2016 ALIDE2_RS02250 6685a57b20d9e4b2a4d86a00c3ae7673 347 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 19-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ALIDE2_RS02250 6685a57b20d9e4b2a4d86a00c3ae7673 347 Pfam PF00437 Type II/IV secretion system protein 12 266 4.8E-46 T 19-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ALIDE2_RS02250 6685a57b20d9e4b2a4d86a00c3ae7673 347 PANTHER PTHR30486:SF6 2 345 9.1E-187 T 19-04-2016 ALIDE2_RS02250 6685a57b20d9e4b2a4d86a00c3ae7673 347 SUPERFAMILY SSF52540 5 335 2.56E-75 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02250 6685a57b20d9e4b2a4d86a00c3ae7673 347 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 343 6.0E-150 T 19-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 ALIDE2_RS02250 6685a57b20d9e4b2a4d86a00c3ae7673 347 Gene3D G3DSA:3.40.50.300 100 342 2.5E-69 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01935 383ebf40bb2be4496d7eaecc474097a4 270 SUPERFAMILY SSF53850 57 222 1.07E-25 T 19-04-2016 ALIDE2_RS01935 383ebf40bb2be4496d7eaecc474097a4 270 Pfam PF03466 LysR substrate binding domain 56 226 4.0E-25 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS01935 383ebf40bb2be4496d7eaecc474097a4 270 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 38 3.4E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS01935 383ebf40bb2be4496d7eaecc474097a4 270 PANTHER PTHR30537:SF1 1 209 1.9E-69 T 19-04-2016 ALIDE2_RS01935 383ebf40bb2be4496d7eaecc474097a4 270 SUPERFAMILY SSF46785 1 80 5.45E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01935 383ebf40bb2be4496d7eaecc474097a4 270 Gene3D G3DSA:1.10.10.10 1 56 8.3E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01935 383ebf40bb2be4496d7eaecc474097a4 270 PANTHER PTHR30537 1 209 1.9E-69 T 19-04-2016 ALIDE2_RS01935 383ebf40bb2be4496d7eaecc474097a4 270 Gene3D G3DSA:3.40.190.10 61 161 1.7E-18 T 19-04-2016 ALIDE2_RS19380 4bec07d67844e11d4c055a47677da239 179 PANTHER PTHR22888 18 53 5.3E-17 T 19-04-2016 ALIDE2_RS19380 4bec07d67844e11d4c055a47677da239 179 PANTHER PTHR22888 85 178 5.3E-17 T 19-04-2016 ALIDE2_RS19380 4bec07d67844e11d4c055a47677da239 179 SUPERFAMILY SSF49503 95 178 1.13E-20 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS19380 4bec07d67844e11d4c055a47677da239 179 PANTHER PTHR22888:SF12 18 53 5.3E-17 T 19-04-2016 ALIDE2_RS19380 4bec07d67844e11d4c055a47677da239 179 PANTHER PTHR22888:SF12 85 178 5.3E-17 T 19-04-2016 ALIDE2_RS19380 4bec07d67844e11d4c055a47677da239 179 Gene3D G3DSA:2.60.40.420 81 178 1.6E-23 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS19380 4bec07d67844e11d4c055a47677da239 179 Gene3D G3DSA:2.60.40.420 19 40 1.6E-23 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS21900 ecbe62188503a040ae56622dd96a5d52 378 PANTHER PTHR30294 4 377 2.4E-212 T 19-04-2016 ALIDE2_RS21900 ecbe62188503a040ae56622dd96a5d52 378 PANTHER PTHR30294:SF22 4 377 2.4E-212 T 19-04-2016 ALIDE2_RS21900 ecbe62188503a040ae56622dd96a5d52 378 Pfam PF12698 ABC-2 family transporter protein 29 367 8.9E-34 T 19-04-2016 ALIDE2_RS06390 a357e6170b77579fd5a52eb95934a072 233 Pfam PF00005 ABC transporter 17 161 1.8E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS06390 a357e6170b77579fd5a52eb95934a072 233 SUPERFAMILY SSF52540 1 231 5.12E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06390 a357e6170b77579fd5a52eb95934a072 233 Gene3D G3DSA:3.40.50.300 1 227 8.0E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS06390 a357e6170b77579fd5a52eb95934a072 233 PANTHER PTHR24220:SF568 3 232 7.1E-129 T 19-04-2016 ALIDE2_RS06390 a357e6170b77579fd5a52eb95934a072 233 SMART SM00382 26 212 2.8E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS06390 a357e6170b77579fd5a52eb95934a072 233 PANTHER PTHR24220 3 232 7.1E-129 T 19-04-2016 ALIDE2_RS06390 a357e6170b77579fd5a52eb95934a072 233 PIRSF PIRSF039137 1 233 1.2E-103 T 19-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 ALIDE2_RS06390 a357e6170b77579fd5a52eb95934a072 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS19270 7cf52ebc281025fbd09c4c3c64e98694 754 PANTHER PTHR32089 459 754 2.4E-90 T 19-04-2016 ALIDE2_RS19270 7cf52ebc281025fbd09c4c3c64e98694 754 PANTHER PTHR32089 42 47 2.4E-90 T 19-04-2016 ALIDE2_RS19270 7cf52ebc281025fbd09c4c3c64e98694 754 SUPERFAMILY SSF58104 452 753 5.89E-63 T 19-04-2016 ALIDE2_RS19270 7cf52ebc281025fbd09c4c3c64e98694 754 SMART SM00283 491 752 9.1E-79 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS19270 7cf52ebc281025fbd09c4c3c64e98694 754 PANTHER PTHR32089:SF43 459 754 2.4E-90 T 19-04-2016 ALIDE2_RS19270 7cf52ebc281025fbd09c4c3c64e98694 754 PANTHER PTHR32089:SF43 42 47 2.4E-90 T 19-04-2016 ALIDE2_RS19270 7cf52ebc281025fbd09c4c3c64e98694 754 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 103 212 1.8E-19 T 19-04-2016 IPR029095 NarX-like, N-terminal ALIDE2_RS19270 7cf52ebc281025fbd09c4c3c64e98694 754 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 239 337 2.6E-8 T 19-04-2016 IPR029095 NarX-like, N-terminal ALIDE2_RS19270 7cf52ebc281025fbd09c4c3c64e98694 754 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 618 647 8.1E-7 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS19270 7cf52ebc281025fbd09c4c3c64e98694 754 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 519 548 8.1E-7 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS19270 7cf52ebc281025fbd09c4c3c64e98694 754 Gene3D G3DSA:1.10.287.950 506 723 2.5E-49 T 19-04-2016 ALIDE2_RS19270 7cf52ebc281025fbd09c4c3c64e98694 754 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 546 751 3.5E-47 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS17210 09495c4614e142fb5f9315b5401e042e 250 SUPERFAMILY SSF52313 5 228 4.97E-88 T 19-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain ALIDE2_RS17210 09495c4614e142fb5f9315b5401e042e 250 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 223 39.43 T 19-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS17210 09495c4614e142fb5f9315b5401e042e 250 PANTHER PTHR12534 3 224 4.5E-103 T 19-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS17210 09495c4614e142fb5f9315b5401e042e 250 Gene3D G3DSA:3.40.50.10490 156 229 1.1E-58 T 19-04-2016 ALIDE2_RS17210 09495c4614e142fb5f9315b5401e042e 250 Gene3D G3DSA:3.40.50.10490 22 98 1.1E-58 T 19-04-2016 ALIDE2_RS17210 09495c4614e142fb5f9315b5401e042e 250 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 224 9.4E-96 T 19-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 ALIDE2_RS17210 09495c4614e142fb5f9315b5401e042e 250 Pfam PF00318 Ribosomal protein S2 8 222 8.5E-90 T 19-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS17210 09495c4614e142fb5f9315b5401e042e 250 Gene3D G3DSA:1.10.287.610 99 150 7.0E-22 T 19-04-2016 ALIDE2_RS17210 09495c4614e142fb5f9315b5401e042e 250 PRINTS PR00395 Ribosomal protein S2 signature 5 23 3.8E-34 T 19-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS17210 09495c4614e142fb5f9315b5401e042e 250 PRINTS PR00395 Ribosomal protein S2 signature 36 45 3.8E-34 T 19-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS17210 09495c4614e142fb5f9315b5401e042e 250 PRINTS PR00395 Ribosomal protein S2 signature 194 208 3.8E-34 T 19-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS17210 09495c4614e142fb5f9315b5401e042e 250 PRINTS PR00395 Ribosomal protein S2 signature 86 103 3.8E-34 T 19-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS17210 09495c4614e142fb5f9315b5401e042e 250 PRINTS PR00395 Ribosomal protein S2 signature 173 184 3.8E-34 T 19-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS17210 09495c4614e142fb5f9315b5401e042e 250 PRINTS PR00395 Ribosomal protein S2 signature 156 173 3.8E-34 T 19-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS17210 09495c4614e142fb5f9315b5401e042e 250 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 5 16 - T 19-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21890 bb6cc88aee1d195afbea0a3d71aa9b5b 356 PANTHER PTHR30438:SF1 8 356 1.5E-107 T 19-04-2016 ALIDE2_RS21890 bb6cc88aee1d195afbea0a3d71aa9b5b 356 SUPERFAMILY SSF111369 115 293 2.22E-5 T 19-04-2016 ALIDE2_RS21890 bb6cc88aee1d195afbea0a3d71aa9b5b 356 Gene3D G3DSA:2.40.50.100 48 81 5.2E-13 T 19-04-2016 ALIDE2_RS21890 bb6cc88aee1d195afbea0a3d71aa9b5b 356 Gene3D G3DSA:2.40.50.100 212 245 5.2E-13 T 19-04-2016 ALIDE2_RS21890 bb6cc88aee1d195afbea0a3d71aa9b5b 356 PANTHER PTHR30438 8 356 1.5E-107 T 19-04-2016 ALIDE2_RS21890 bb6cc88aee1d195afbea0a3d71aa9b5b 356 SUPERFAMILY SSF111369 41 122 4.32E-8 T 19-04-2016 ALIDE2_RS21890 bb6cc88aee1d195afbea0a3d71aa9b5b 356 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 300 1.5E-12 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS23380 820c43ecacca73fe3f43a29761a86fbf 395 Gene3D G3DSA:3.30.70.270 220 381 3.6E-58 T 19-04-2016 ALIDE2_RS23380 820c43ecacca73fe3f43a29761a86fbf 395 SMART SM00267 208 381 1.2E-59 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS23380 820c43ecacca73fe3f43a29761a86fbf 395 SUPERFAMILY SSF55073 224 380 2.43E-50 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS23380 820c43ecacca73fe3f43a29761a86fbf 395 PANTHER PTHR10799:SF750 102 378 4.6E-29 T 19-04-2016 ALIDE2_RS23380 820c43ecacca73fe3f43a29761a86fbf 395 PANTHER PTHR10799 102 378 4.6E-29 T 19-04-2016 ALIDE2_RS23380 820c43ecacca73fe3f43a29761a86fbf 395 Pfam PF00990 Diguanylate cyclase, GGDEF domain 219 377 1.5E-46 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS23380 820c43ecacca73fe3f43a29761a86fbf 395 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 219 380 1.9E-52 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 SMART SM00382 353 497 1.1E-12 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 357 370 - T 19-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 Pfam PF01590 GAF domain 74 202 2.7E-8 T 19-04-2016 IPR003018 GAF domain GO:0005515 ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 Pfam PF02954 Bacterial regulatory protein, Fis family 617 647 6.6E-8 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 544 553 - T 19-04-2016 IPR025944 Sigma-54 interaction domain, conserved site ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 Gene3D G3DSA:3.30.450.40 157 204 4.3E-4 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 PANTHER PTHR32071 335 647 2.7E-124 T 19-04-2016 ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 420 435 - T 19-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 SUPERFAMILY SSF52540 340 574 3.9E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 Gene3D G3DSA:1.10.10.60 609 647 9.2E-11 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 SUPERFAMILY SSF55781 66 204 3.89E-8 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 SUPERFAMILY SSF46689 544 647 7.89E-8 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 Gene3D G3DSA:1.10.8.60 508 578 6.6E-14 T 19-04-2016 ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 Gene3D G3DSA:3.40.50.300 339 506 3.0E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 Pfam PF00158 Sigma-54 interaction domain 337 498 1.8E-64 T 19-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ALIDE2_RS22160 e3af77b87847d2f09490a6a46e8f8cb7 657 PANTHER PTHR32071:SF5 335 647 2.7E-124 T 19-04-2016 ALIDE2_RS11825 5ea42d47c55ad809d8716966cb6a2f54 325 PANTHER PTHR30349 1 297 3.4E-91 T 19-04-2016 ALIDE2_RS11825 5ea42d47c55ad809d8716966cb6a2f54 325 PANTHER PTHR30349:SF16 1 297 3.4E-91 T 19-04-2016 ALIDE2_RS11825 5ea42d47c55ad809d8716966cb6a2f54 325 PIRSF PIRSF017082 1 325 2.1E-88 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS11825 5ea42d47c55ad809d8716966cb6a2f54 325 SUPERFAMILY SSF53850 115 281 2.49E-13 T 19-04-2016 ALIDE2_RS11825 5ea42d47c55ad809d8716966cb6a2f54 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 320 2.4E-86 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS03665 c099c3d51f04ecb480c1958d220e75b3 160 Pfam PF05981 CreA protein 27 152 4.0E-56 T 19-04-2016 IPR010292 Uncharacterised protein family CreA ALIDE2_RS03665 c099c3d51f04ecb480c1958d220e75b3 160 PANTHER PTHR37952 1 151 7.1E-63 T 19-04-2016 ALIDE2_RS03665 c099c3d51f04ecb480c1958d220e75b3 160 PIRSF PIRSF003174 1 160 2.3E-67 T 19-04-2016 IPR010292 Uncharacterised protein family CreA ALIDE2_RS03665 c099c3d51f04ecb480c1958d220e75b3 160 PANTHER PTHR37952:SF2 1 151 7.1E-63 T 19-04-2016 ALIDE2_RS03400 2d36a7519f8833b584dfd883360a14a3 218 SUPERFAMILY SSF81342 12 208 7.22E-32 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 ALIDE2_RS03400 2d36a7519f8833b584dfd883360a14a3 218 PANTHER PTHR30485:SF1 8 210 6.9E-45 T 19-04-2016 ALIDE2_RS03400 2d36a7519f8833b584dfd883360a14a3 218 PANTHER PTHR30485 8 210 6.9E-45 T 19-04-2016 ALIDE2_RS03400 2d36a7519f8833b584dfd883360a14a3 218 Pfam PF01292 Prokaryotic cytochrome b561 16 202 3.3E-21 T 19-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ALIDE2_RS03400 2d36a7519f8833b584dfd883360a14a3 218 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 170 192 7.1E-5 T 19-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 ALIDE2_RS03400 2d36a7519f8833b584dfd883360a14a3 218 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 18 41 7.1E-5 T 19-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 ALIDE2_RS03400 2d36a7519f8833b584dfd883360a14a3 218 Gene3D G3DSA:1.20.950.20 16 207 5.1E-41 T 19-04-2016 ALIDE2_RS05080 50c295b2a2d1a06197f5bac831f2a850 184 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 3 170 1.2E-27 T 19-04-2016 IPR010195 Uncharacterised peroxidase-related ALIDE2_RS05080 50c295b2a2d1a06197f5bac831f2a850 184 Gene3D G3DSA:1.20.1290.10 41 173 1.3E-34 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS05080 50c295b2a2d1a06197f5bac831f2a850 184 PANTHER PTHR35446 1 171 4.8E-28 T 19-04-2016 ALIDE2_RS05080 50c295b2a2d1a06197f5bac831f2a850 184 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 57 104 4.0E-13 T 19-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS05080 50c295b2a2d1a06197f5bac831f2a850 184 Pfam PF02627 Carboxymuconolactone decarboxylase family 51 118 2.8E-10 T 19-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS05080 50c295b2a2d1a06197f5bac831f2a850 184 SUPERFAMILY SSF69118 1 175 5.18E-51 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS05080 50c295b2a2d1a06197f5bac831f2a850 184 Gene3D G3DSA:1.20.5.810 11 40 1.9E-5 T 19-04-2016 ALIDE2_RS22035 8e00ad10ef78356424e6ddc4c5494db3 62 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 61 1.5E-17 T 19-04-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 ALIDE2_RS22035 8e00ad10ef78356424e6ddc4c5494db3 62 Gene3D G3DSA:3.30.429.20 1 60 1.2E-23 T 19-04-2016 ALIDE2_RS22035 8e00ad10ef78356424e6ddc4c5494db3 62 SUPERFAMILY SSF55331 2 61 9.29E-19 T 19-04-2016 IPR014347 Tautomerase/MIF superfamily ALIDE2_RS22035 8e00ad10ef78356424e6ddc4c5494db3 62 Pfam PF01361 Tautomerase enzyme 5 56 1.7E-14 T 19-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 ALIDE2_RS18300 155476d44b5ff3db0f6a761792e1e3ac 215 Pfam PF01865 Protein of unknown function DUF47 4 213 2.3E-32 T 19-04-2016 IPR018445 Putative phosphate transport regulator ALIDE2_RS18300 155476d44b5ff3db0f6a761792e1e3ac 215 Gene3D G3DSA:1.20.58.220 117 206 5.6E-5 T 19-04-2016 ALIDE2_RS18300 155476d44b5ff3db0f6a761792e1e3ac 215 PANTHER PTHR37298 1 215 6.5E-52 T 19-04-2016 ALIDE2_RS18300 155476d44b5ff3db0f6a761792e1e3ac 215 SUPERFAMILY SSF109755 17 207 1.57E-6 T 19-04-2016 ALIDE2_RS02735 a4c74c69c12b54ebd0225e350ae2c7d3 240 Pfam PF02308 MgtC family 19 139 1.8E-32 T 19-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ALIDE2_RS02735 a4c74c69c12b54ebd0225e350ae2c7d3 240 PANTHER PTHR33778:SF3 1 237 3.3E-80 T 19-04-2016 ALIDE2_RS02735 a4c74c69c12b54ebd0225e350ae2c7d3 240 PRINTS PR01837 MgtC/SapB protein signature 94 118 1.3E-39 T 19-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ALIDE2_RS02735 a4c74c69c12b54ebd0225e350ae2c7d3 240 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.3E-39 T 19-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ALIDE2_RS02735 a4c74c69c12b54ebd0225e350ae2c7d3 240 PRINTS PR01837 MgtC/SapB protein signature 67 89 1.3E-39 T 19-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ALIDE2_RS02735 a4c74c69c12b54ebd0225e350ae2c7d3 240 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.3E-39 T 19-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ALIDE2_RS02735 a4c74c69c12b54ebd0225e350ae2c7d3 240 PANTHER PTHR33778 1 237 3.3E-80 T 19-04-2016 ALIDE2_RS05845 2c16558f796a965887b4a75bfdd42b9d 318 PIRSF PIRSF017082 3 316 5.4E-79 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS05845 2c16558f796a965887b4a75bfdd42b9d 318 SUPERFAMILY SSF53850 106 267 4.71E-9 T 19-04-2016 ALIDE2_RS05845 2c16558f796a965887b4a75bfdd42b9d 318 PANTHER PTHR30349:SF1 5 274 5.6E-71 T 19-04-2016 ALIDE2_RS05845 2c16558f796a965887b4a75bfdd42b9d 318 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 312 7.8E-77 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS05845 2c16558f796a965887b4a75bfdd42b9d 318 PANTHER PTHR30349 5 274 5.6E-71 T 19-04-2016 ALIDE2_RS14095 1accd24429d92843eea34bb3f2525111 239 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 205 1.2E-35 T 19-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 ALIDE2_RS14095 1accd24429d92843eea34bb3f2525111 239 PANTHER PTHR30625:SF3 16 217 4.8E-43 T 19-04-2016 ALIDE2_RS14095 1accd24429d92843eea34bb3f2525111 239 PANTHER PTHR30625 16 217 4.8E-43 T 19-04-2016 ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 644 36.451 T 19-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 SUPERFAMILY SSF53067 188 383 4.26E-69 T 19-04-2016 ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 Gene3D G3DSA:3.30.30.30 53 107 1.9E-27 T 19-04-2016 ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 604 6.3E-287 T 19-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 SUPERFAMILY SSF53067 4 184 1.02E-64 T 19-04-2016 ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 Gene3D G3DSA:3.90.640.10 231 316 3.1E-30 T 19-04-2016 ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 Gene3D G3DSA:2.60.34.10 391 533 8.5E-69 T 19-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 19-04-2016 IPR018181 Heat shock protein 70, conserved site ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 19-04-2016 IPR018181 Heat shock protein 70, conserved site ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 Gene3D G3DSA:1.20.1270.10 534 604 1.5E-26 T 19-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 PANTHER PTHR19375 2 646 0.0 T 19-04-2016 ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 Pfam PF00012 Hsp70 protein 4 604 8.3E-262 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 Gene3D G3DSA:3.30.420.40 197 230 1.5E-34 T 19-04-2016 ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 Gene3D G3DSA:3.30.420.40 320 362 1.5E-34 T 19-04-2016 ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 PRINTS PR00301 70kDa heat shock protein signature 366 386 1.4E-79 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.4E-79 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 PRINTS PR00301 70kDa heat shock protein signature 335 351 1.4E-79 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 PRINTS PR00301 70kDa heat shock protein signature 470 486 1.4E-79 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 PRINTS PR00301 70kDa heat shock protein signature 199 209 1.4E-79 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 PRINTS PR00301 70kDa heat shock protein signature 389 408 1.4E-79 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.4E-79 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.4E-79 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.4E-79 T 19-04-2016 IPR013126 Heat shock protein 70 family ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 PANTHER PTHR19375:SF173 2 646 0.0 T 19-04-2016 ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 Gene3D G3DSA:3.30.420.40 4 52 3.2E-63 T 19-04-2016 ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 Gene3D G3DSA:3.30.420.40 119 196 3.2E-63 T 19-04-2016 ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 SUPERFAMILY SSF100934 508 606 2.94E-18 T 19-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 SUPERFAMILY SSF100920 385 541 5.76E-59 T 19-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain ALIDE2_RS06590 e350c4fc0b37ce5255e9b7b7fc516fd4 647 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 19-04-2016 IPR018181 Heat shock protein 70, conserved site ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 Pfam PF00580 UvrD/REP helicase N-terminal domain 18 454 7.4E-43 T 19-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 Gene3D G3DSA:3.40.50.300 347 455 3.0E-53 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 Gene3D G3DSA:3.40.50.300 21 77 3.0E-53 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 Gene3D G3DSA:3.40.50.300 129 193 3.0E-53 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 Gene3D G3DSA:1.10.486.10 614 743 8.0E-13 T 19-04-2016 ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 Gene3D G3DSA:3.40.50.300 770 805 3.1E-30 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 Gene3D G3DSA:3.40.50.300 840 878 3.1E-30 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 Gene3D G3DSA:3.40.50.300 554 613 3.1E-30 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 Gene3D G3DSA:3.40.50.300 471 522 3.1E-30 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 Pfam PF12705 PD-(D/E)XK nuclease superfamily 931 1079 3.8E-5 T 19-04-2016 ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 PANTHER PTHR11070 843 880 5.5E-68 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 PANTHER PTHR11070 761 813 5.5E-68 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 PANTHER PTHR11070 315 514 5.5E-68 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 PANTHER PTHR11070 19 90 5.5E-68 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 PANTHER PTHR11070 121 214 5.5E-68 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 PANTHER PTHR11070 549 737 5.5E-68 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 Pfam PF13361 UvrD-like helicase C-terminal domain 769 868 2.8E-8 T 19-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 Pfam PF13361 UvrD-like helicase C-terminal domain 550 674 7.7E-11 T 19-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 SUPERFAMILY SSF52540 121 190 6.13E-90 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 SUPERFAMILY SSF52540 18 81 6.13E-90 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 SUPERFAMILY SSF52540 522 795 6.13E-90 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 SUPERFAMILY SSF52540 337 495 6.13E-90 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13230 d390050cdd438d9e150d3de086eeab8c 1095 SUPERFAMILY SSF52540 844 871 6.13E-90 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04850 3276b6c1071a216da24d3fa76a285511 113 Gene3D G3DSA:3.90.850.10 22 112 2.1E-15 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS04850 3276b6c1071a216da24d3fa76a285511 113 SUPERFAMILY SSF56529 27 102 3.51E-10 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS14970 406e58c63962e4dd960c438d8fbf3694 336 PIRSF PIRSF006470 1 331 1.0E-116 T 19-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 ALIDE2_RS14970 406e58c63962e4dd960c438d8fbf3694 336 PANTHER PTHR33376 2 334 1.3E-83 T 19-04-2016 ALIDE2_RS14970 406e58c63962e4dd960c438d8fbf3694 336 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 286 1.9E-83 T 19-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 ALIDE2_RS14970 406e58c63962e4dd960c438d8fbf3694 336 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 311 3.7E-91 T 19-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 ALIDE2_RS14970 406e58c63962e4dd960c438d8fbf3694 336 PANTHER PTHR33376:SF2 2 334 1.3E-83 T 19-04-2016 ALIDE2_RS22505 88e892e303ca48769356bb912827e910 253 SUPERFAMILY SSF51735 6 250 2.33E-66 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22505 88e892e303ca48769356bb912827e910 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.7E-52 T 19-04-2016 ALIDE2_RS22505 88e892e303ca48769356bb912827e910 253 Gene3D G3DSA:3.40.50.720 2 250 6.9E-67 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22505 88e892e303ca48769356bb912827e910 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 5.0E-6 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22505 88e892e303ca48769356bb912827e910 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 5.0E-6 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22505 88e892e303ca48769356bb912827e910 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 5.0E-6 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22505 88e892e303ca48769356bb912827e910 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.5E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22505 88e892e303ca48769356bb912827e910 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.5E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22505 88e892e303ca48769356bb912827e910 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.5E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22505 88e892e303ca48769356bb912827e910 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.5E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22505 88e892e303ca48769356bb912827e910 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.5E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22505 88e892e303ca48769356bb912827e910 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.5E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22505 88e892e303ca48769356bb912827e910 253 PANTHER PTHR24322 159 190 5.3E-33 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22505 88e892e303ca48769356bb912827e910 253 PANTHER PTHR24322 10 143 5.3E-33 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21145 4b092d698c8c66393186fa3b8f1b6b37 273 SUPERFAMILY SSF52540 8 249 3.48E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21145 4b092d698c8c66393186fa3b8f1b6b37 273 Pfam PF00005 ABC transporter 26 177 2.2E-23 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS21145 4b092d698c8c66393186fa3b8f1b6b37 273 PANTHER PTHR24220:SF458 11 272 4.2E-120 T 19-04-2016 ALIDE2_RS21145 4b092d698c8c66393186fa3b8f1b6b37 273 Gene3D G3DSA:3.40.50.300 6 245 2.2E-53 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21145 4b092d698c8c66393186fa3b8f1b6b37 273 SMART SM00382 35 244 4.2E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS21145 4b092d698c8c66393186fa3b8f1b6b37 273 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS21145 4b092d698c8c66393186fa3b8f1b6b37 273 PANTHER PTHR24220 11 272 4.2E-120 T 19-04-2016 ALIDE2_RS01250 9c915e32ce9aae3b87eae8da9e162bb7 239 Pfam PF03473 MOSC domain 55 173 9.1E-25 T 19-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 ALIDE2_RS01250 9c915e32ce9aae3b87eae8da9e162bb7 239 Gene3D G3DSA:2.40.33.20 9 237 2.3E-81 T 19-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like ALIDE2_RS01250 9c915e32ce9aae3b87eae8da9e162bb7 239 PANTHER PTHR30212 29 238 3.4E-66 T 19-04-2016 ALIDE2_RS01250 9c915e32ce9aae3b87eae8da9e162bb7 239 Pfam PF03475 3-alpha domain 183 224 6.6E-6 T 19-04-2016 IPR005163 3-alpha domain ALIDE2_RS01250 9c915e32ce9aae3b87eae8da9e162bb7 239 SUPERFAMILY SSF50800 8 237 6.8E-66 T 19-04-2016 IPR011037 Pyruvate kinase-like, insert domain ALIDE2_RS01250 9c915e32ce9aae3b87eae8da9e162bb7 239 PANTHER PTHR30212:SF2 29 238 3.4E-66 T 19-04-2016 ALIDE2_RS07890 64bd9ad8775ee43ad2ef9b83d5750b61 666 PANTHER PTHR37937:SF1 9 570 9.7E-106 T 19-04-2016 ALIDE2_RS07890 64bd9ad8775ee43ad2ef9b83d5750b61 666 SUPERFAMILY SSF52540 105 554 3.66E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07890 64bd9ad8775ee43ad2ef9b83d5750b61 666 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 111 558 1.3E-103 T 19-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 ALIDE2_RS07890 64bd9ad8775ee43ad2ef9b83d5750b61 666 PANTHER PTHR37937 9 570 9.7E-106 T 19-04-2016 ALIDE2_RS07890 64bd9ad8775ee43ad2ef9b83d5750b61 666 Gene3D G3DSA:3.40.50.300 104 209 4.2E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07890 64bd9ad8775ee43ad2ef9b83d5750b61 666 Gene3D G3DSA:3.40.50.300 347 552 4.2E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22435 1be2762a27c398e6b3ba0700d242114d 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 319 3.2E-86 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22435 1be2762a27c398e6b3ba0700d242114d 323 PANTHER PTHR30349 5 309 1.6E-105 T 19-04-2016 ALIDE2_RS22435 1be2762a27c398e6b3ba0700d242114d 323 SUPERFAMILY SSF53850 111 285 3.8E-14 T 19-04-2016 ALIDE2_RS22435 1be2762a27c398e6b3ba0700d242114d 323 PIRSF PIRSF017082 1 323 1.9E-89 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22435 1be2762a27c398e6b3ba0700d242114d 323 PANTHER PTHR30349:SF16 5 309 1.6E-105 T 19-04-2016 ALIDE2_RS19420 bd9c235b52e60e06a0eaa443b7b25be2 387 Gene3D G3DSA:1.10.540.10 1 118 3.5E-31 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS19420 bd9c235b52e60e06a0eaa443b7b25be2 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 219 4.1E-18 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS19420 bd9c235b52e60e06a0eaa443b7b25be2 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 117 2.2E-22 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS19420 bd9c235b52e60e06a0eaa443b7b25be2 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 365 3.6E-30 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS19420 bd9c235b52e60e06a0eaa443b7b25be2 387 PANTHER PTHR10909:SF285 1 387 5.0E-197 T 19-04-2016 ALIDE2_RS19420 bd9c235b52e60e06a0eaa443b7b25be2 387 SUPERFAMILY SSF47203 230 385 2.58E-38 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS19420 bd9c235b52e60e06a0eaa443b7b25be2 387 Gene3D G3DSA:2.40.110.10 122 221 8.4E-26 T 19-04-2016 ALIDE2_RS19420 bd9c235b52e60e06a0eaa443b7b25be2 387 PANTHER PTHR10909 1 387 5.0E-197 T 19-04-2016 ALIDE2_RS19420 bd9c235b52e60e06a0eaa443b7b25be2 387 SUPERFAMILY SSF56645 2 230 1.44E-55 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS19420 bd9c235b52e60e06a0eaa443b7b25be2 387 Gene3D G3DSA:1.20.140.10 222 386 1.4E-47 T 19-04-2016 ALIDE2_RS06155 5a587a3237f7fb54c63615cf9c811615 415 Gene3D G3DSA:3.40.50.10540 5 215 7.0E-57 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS06155 5a587a3237f7fb54c63615cf9c811615 415 Gene3D G3DSA:3.40.50.10540 311 405 7.0E-57 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS06155 5a587a3237f7fb54c63615cf9c811615 415 Gene3D G3DSA:3.30.1540.10 237 310 4.2E-11 T 19-04-2016 ALIDE2_RS06155 5a587a3237f7fb54c63615cf9c811615 415 SUPERFAMILY SSF89796 4 405 5.23E-69 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS06155 5a587a3237f7fb54c63615cf9c811615 415 Pfam PF02515 CoA-transferase family III 6 381 1.1E-53 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS17540 ebc27e5ddb30bce23105552860825c68 181 Pfam PF03737 Demethylmenaquinone methyltransferase 39 124 9.5E-19 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS17540 ebc27e5ddb30bce23105552860825c68 181 SUPERFAMILY SSF89562 37 134 6.15E-25 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS17540 ebc27e5ddb30bce23105552860825c68 181 PANTHER PTHR33254 36 179 1.8E-60 T 19-04-2016 ALIDE2_RS17540 ebc27e5ddb30bce23105552860825c68 181 PANTHER PTHR33254:SF2 36 179 1.8E-60 T 19-04-2016 ALIDE2_RS17540 ebc27e5ddb30bce23105552860825c68 181 Gene3D G3DSA:3.50.30.40 38 131 5.5E-25 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS18330 7fd8787bcd5600f53fbadb175909ecd4 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 293 1.5E-46 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS18330 7fd8787bcd5600f53fbadb175909ecd4 309 PANTHER PTHR11795:SF371 1 308 4.3E-114 T 19-04-2016 ALIDE2_RS18330 7fd8787bcd5600f53fbadb175909ecd4 309 PANTHER PTHR11795 1 308 4.3E-114 T 19-04-2016 ALIDE2_RS16240 f2cbb63a5254b0b557afd71b1f242866 399 SUPERFAMILY SSF54675 1 134 6.48E-44 T 19-04-2016 ALIDE2_RS16240 f2cbb63a5254b0b557afd71b1f242866 399 Gene3D G3DSA:3.20.140.10 2 396 6.0E-140 T 19-04-2016 ALIDE2_RS16240 f2cbb63a5254b0b557afd71b1f242866 399 SUPERFAMILY SSF51690 116 395 7.65E-84 T 19-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 ALIDE2_RS16240 f2cbb63a5254b0b557afd71b1f242866 399 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 162 396 5.0E-70 T 19-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 ALIDE2_RS16240 f2cbb63a5254b0b557afd71b1f242866 399 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 2 396 1.0E-137 T 19-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 ALIDE2_RS16240 f2cbb63a5254b0b557afd71b1f242866 399 PIRSF PIRSF000484 1 388 5.6E-66 T 19-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 ALIDE2_RS16240 f2cbb63a5254b0b557afd71b1f242866 399 PANTHER PTHR11098:SF16 2 396 4.3E-178 T 19-04-2016 ALIDE2_RS16240 f2cbb63a5254b0b557afd71b1f242866 399 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 397 45.242 T 19-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 ALIDE2_RS16240 f2cbb63a5254b0b557afd71b1f242866 399 PANTHER PTHR11098 2 396 4.3E-178 T 19-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 ALIDE2_RS05185 2ecc323aab8927e43afb597a13b916e7 326 PIRSF PIRSF017082 1 324 1.4E-81 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS05185 2ecc323aab8927e43afb597a13b916e7 326 Gene3D G3DSA:3.40.190.10 137 229 6.9E-4 T 19-04-2016 ALIDE2_RS05185 2ecc323aab8927e43afb597a13b916e7 326 SUPERFAMILY SSF53850 115 280 3.01E-14 T 19-04-2016 ALIDE2_RS05185 2ecc323aab8927e43afb597a13b916e7 326 PANTHER PTHR30349:SF32 27 312 1.5E-90 T 19-04-2016 ALIDE2_RS05185 2ecc323aab8927e43afb597a13b916e7 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 315 1.3E-90 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS05185 2ecc323aab8927e43afb597a13b916e7 326 PANTHER PTHR30349 27 312 1.5E-90 T 19-04-2016 ALIDE2_RS04970 4e9b557dcdae095a8c31d659d2ae8d7e 139 SUPERFAMILY SSF52172 3 118 7.4E-18 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS04970 4e9b557dcdae095a8c31d659d2ae8d7e 139 Gene3D G3DSA:3.40.50.2300 3 116 2.3E-17 T 19-04-2016 ALIDE2_RS04970 4e9b557dcdae095a8c31d659d2ae8d7e 139 Pfam PF00072 Response regulator receiver domain 7 116 4.2E-12 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS04970 4e9b557dcdae095a8c31d659d2ae8d7e 139 SMART SM00448 3 118 1.2E-10 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.8E-36 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.8E-36 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.8E-36 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.8E-36 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 Pfam PF01926 50S ribosome-binding GTPase 161 285 6.0E-25 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 Gene3D G3DSA:3.40.50.300 160 340 3.9E-53 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 Pfam PF01018 GTP1/OBG 3 158 9.9E-57 T 19-04-2016 IPR006169 GTP1/OBG domain GO:0005525 ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 PANTHER PTHR11702:SF3 1 341 1.9E-160 T 19-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 SUPERFAMILY SSF82051 2 158 1.44E-53 T 19-04-2016 IPR006169 GTP1/OBG domain GO:0005525 ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 PIRSF PIRSF002401 1 352 1.3E-133 T 19-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 Gene3D G3DSA:2.70.210.12 2 156 1.8E-53 T 19-04-2016 IPR006169 GTP1/OBG domain GO:0005525 ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 1.5E-141 T 19-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 Hamap MF_01454 GTPase Obg [obg]. 2 334 46.855 T 19-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 SUPERFAMILY SSF52540 152 336 6.99E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 PANTHER PTHR11702 1 341 1.9E-160 T 19-04-2016 ALIDE2_RS04445 49d6673ab45c91ff6b130db26085d924 357 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 19-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 ALIDE2_RS11670 35014e616afe7a28135d773ded988cb8 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 27.291 T 19-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS11670 35014e616afe7a28135d773ded988cb8 155 PIRSF PIRSF004505 1 154 6.0E-43 T 19-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS11670 35014e616afe7a28135d773ded988cb8 155 SUPERFAMILY SSF75217 1 152 2.41E-46 T 19-04-2016 IPR029028 Alpha/beta knot methyltransferases ALIDE2_RS11670 35014e616afe7a28135d773ded988cb8 155 Pfam PF02590 Predicted SPOUT methyltransferase 1 153 3.2E-47 T 19-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS11670 35014e616afe7a28135d773ded988cb8 155 PANTHER PTHR33603 1 154 2.3E-52 T 19-04-2016 ALIDE2_RS11670 35014e616afe7a28135d773ded988cb8 155 PANTHER PTHR33603:SF1 1 154 2.3E-52 T 19-04-2016 ALIDE2_RS11670 35014e616afe7a28135d773ded988cb8 155 Gene3D G3DSA:3.40.1280.10 1 154 1.3E-52 T 19-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ALIDE2_RS21605 ea3687e5c9fff0b47b3ecea967711f11 143 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 18.899 T 19-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS21605 ea3687e5c9fff0b47b3ecea967711f11 143 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 142 3.2E-30 T 19-04-2016 IPR021131 Ribosomal protein L18e/L15P ALIDE2_RS21605 ea3687e5c9fff0b47b3ecea967711f11 143 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 3.9E-46 T 19-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS21605 ea3687e5c9fff0b47b3ecea967711f11 143 PANTHER PTHR12934 1 141 3.0E-57 T 19-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 ALIDE2_RS21605 ea3687e5c9fff0b47b3ecea967711f11 143 Gene3D G3DSA:3.100.10.10 32 142 3.1E-25 T 19-04-2016 ALIDE2_RS21605 ea3687e5c9fff0b47b3ecea967711f11 143 SUPERFAMILY SSF52080 4 141 7.06E-44 T 19-04-2016 IPR021131 Ribosomal protein L18e/L15P ALIDE2_RS21375 2b02af0adbb0109e3fafb9ec10af528b 296 Pfam PF13557 Putative MetA-pathway of phenol degradation 57 291 2.8E-36 T 19-04-2016 IPR025737 MetA-pathway of phenol degradation, putative ALIDE2_RS18545 75f80dc3705158f74e156e09a7940386 281 Gene3D G3DSA:3.20.20.140 7 272 1.4E-65 T 19-04-2016 ALIDE2_RS18545 75f80dc3705158f74e156e09a7940386 281 PIRSF PIRSF005902 2 276 1.4E-56 T 19-04-2016 IPR001130 TatD family GO:0016788 ALIDE2_RS18545 75f80dc3705158f74e156e09a7940386 281 SUPERFAMILY SSF51556 8 272 5.93E-68 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS18545 75f80dc3705158f74e156e09a7940386 281 PANTHER PTHR10060 9 277 2.5E-70 T 19-04-2016 IPR001130 TatD family GO:0016788 ALIDE2_RS18545 75f80dc3705158f74e156e09a7940386 281 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 199 215 - T 19-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ALIDE2_RS18545 75f80dc3705158f74e156e09a7940386 281 Pfam PF01026 TatD related DNase 9 272 4.6E-55 T 19-04-2016 IPR001130 TatD family GO:0016788 ALIDE2_RS22900 0099fd02de8219f896202e7bc5f0b17e 293 SUPERFAMILY SSF103481 43 143 3.4E-16 T 19-04-2016 ALIDE2_RS22900 0099fd02de8219f896202e7bc5f0b17e 293 PANTHER PTHR32322 1 290 1.2E-42 T 19-04-2016 ALIDE2_RS22900 0099fd02de8219f896202e7bc5f0b17e 293 PANTHER PTHR32322:SF9 1 290 1.2E-42 T 19-04-2016 ALIDE2_RS22900 0099fd02de8219f896202e7bc5f0b17e 293 SUPERFAMILY SSF103481 193 290 1.15E-10 T 19-04-2016 ALIDE2_RS22900 0099fd02de8219f896202e7bc5f0b17e 293 Pfam PF00892 EamA-like transporter family 152 287 8.0E-16 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS22900 0099fd02de8219f896202e7bc5f0b17e 293 Pfam PF00892 EamA-like transporter family 9 140 6.3E-21 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS18200 ad68441bea04062ee8eb7666dce06b45 297 PANTHER PTHR23200 3 273 9.2E-58 T 19-04-2016 ALIDE2_RS18200 ad68441bea04062ee8eb7666dce06b45 297 Pfam PF00753 Metallo-beta-lactamase superfamily 61 272 1.1E-18 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS18200 ad68441bea04062ee8eb7666dce06b45 297 PANTHER PTHR23200:SF43 3 273 9.2E-58 T 19-04-2016 ALIDE2_RS18200 ad68441bea04062ee8eb7666dce06b45 297 Gene3D G3DSA:3.60.15.10 4 292 6.0E-45 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS18200 ad68441bea04062ee8eb7666dce06b45 297 SUPERFAMILY SSF56281 49 289 8.94E-33 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS18200 ad68441bea04062ee8eb7666dce06b45 297 SMART SM00849 59 272 1.6E-13 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS13955 bacfaef502f472f7efd73f4a72e9174c 195 TIGRFAM TIGR02771 TraF_Ti: conjugative transfer signal peptidase TraF 37 195 2.2E-38 T 19-04-2016 IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF GO:0000746|GO:0042597 ALIDE2_RS13955 bacfaef502f472f7efd73f4a72e9174c 195 Gene3D G3DSA:2.10.109.10 157 194 1.9E-10 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS13955 bacfaef502f472f7efd73f4a72e9174c 195 Gene3D G3DSA:2.10.109.10 77 120 1.9E-10 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS13955 bacfaef502f472f7efd73f4a72e9174c 195 Pfam PF10502 Signal peptidase, peptidase S26 62 194 7.4E-17 T 19-04-2016 IPR019533 Peptidase S26 ALIDE2_RS13955 bacfaef502f472f7efd73f4a72e9174c 195 SUPERFAMILY SSF51306 65 195 4.6E-24 T 19-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C ALIDE2_RS04285 1c0aeae515ded792af558ed81e8560de 251 Gene3D G3DSA:1.10.760.10 20 216 2.8E-65 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS04285 1c0aeae515ded792af558ed81e8560de 251 Pfam PF02167 Cytochrome C1 family 30 249 1.2E-19 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 ALIDE2_RS04285 1c0aeae515ded792af558ed81e8560de 251 Gene3D G3DSA:1.20.5.100 220 251 8.9E-5 T 19-04-2016 ALIDE2_RS04285 1c0aeae515ded792af558ed81e8560de 251 SUPERFAMILY SSF46626 19 215 4.91E-51 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS04285 1c0aeae515ded792af558ed81e8560de 251 PANTHER PTHR10266:SF3 194 251 1.4E-39 T 19-04-2016 ALIDE2_RS04285 1c0aeae515ded792af558ed81e8560de 251 PANTHER PTHR10266:SF3 6 168 1.4E-39 T 19-04-2016 ALIDE2_RS04285 1c0aeae515ded792af558ed81e8560de 251 PANTHER PTHR10266 194 251 1.4E-39 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 ALIDE2_RS04285 1c0aeae515ded792af558ed81e8560de 251 PANTHER PTHR10266 6 168 1.4E-39 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 ALIDE2_RS05915 19a5d6529d80da59a339d364a6118c3e 158 Pfam PF02391 MoaE protein 6 120 4.9E-36 T 19-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS05915 19a5d6529d80da59a339d364a6118c3e 158 Gene3D G3DSA:3.90.1170.40 2 139 3.6E-58 T 19-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS05915 19a5d6529d80da59a339d364a6118c3e 158 PANTHER PTHR23404 28 149 9.9E-37 T 19-04-2016 ALIDE2_RS05915 19a5d6529d80da59a339d364a6118c3e 158 SUPERFAMILY SSF54690 4 149 7.45E-51 T 19-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS05915 19a5d6529d80da59a339d364a6118c3e 158 PANTHER PTHR23404:SF2 28 149 9.9E-37 T 19-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 ALIDE2_RS08105 787b6d6747a066b9b7f8e43fdfd2dcab 189 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 51 73 - T 19-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ALIDE2_RS08105 787b6d6747a066b9b7f8e43fdfd2dcab 189 PIRSF PIRSF000847 1 189 3.0E-42 T 19-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 ALIDE2_RS08105 787b6d6747a066b9b7f8e43fdfd2dcab 189 PANTHER PTHR14269 3 183 1.3E-58 T 19-04-2016 ALIDE2_RS08105 787b6d6747a066b9b7f8e43fdfd2dcab 189 PANTHER PTHR14269:SF13 3 183 1.3E-58 T 19-04-2016 ALIDE2_RS08105 787b6d6747a066b9b7f8e43fdfd2dcab 189 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 182 4.1E-50 T 19-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 ALIDE2_RS08105 787b6d6747a066b9b7f8e43fdfd2dcab 189 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 73 1.1E-15 T 19-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ALIDE2_RS05015 06f3145400f07246171acc9626e8a1f8 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 322 3.5E-58 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS05015 06f3145400f07246171acc9626e8a1f8 327 PANTHER PTHR30349:SF1 1 293 1.0E-61 T 19-04-2016 ALIDE2_RS05015 06f3145400f07246171acc9626e8a1f8 327 PANTHER PTHR30349 1 293 1.0E-61 T 19-04-2016 ALIDE2_RS05015 06f3145400f07246171acc9626e8a1f8 327 PIRSF PIRSF017082 1 326 1.9E-65 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS10295 17b004f9f815610a7e79d00e743444ad 93 Pfam PF12728 Helix-turn-helix domain 9 57 1.8E-17 T 19-04-2016 ALIDE2_RS10295 17b004f9f815610a7e79d00e743444ad 93 SUPERFAMILY SSF46955 9 57 1.35E-8 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS10295 17b004f9f815610a7e79d00e743444ad 93 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 9 54 3.3E-16 T 19-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 ALIDE2_RS10295 17b004f9f815610a7e79d00e743444ad 93 Gene3D G3DSA:1.10.10.10 10 65 1.6E-8 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05565 58d890add3c26b8f74952ad35b29a60b 273 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 273 1.4E-38 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS05565 58d890add3c26b8f74952ad35b29a60b 273 Gene3D G3DSA:3.90.226.10 16 273 2.7E-56 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS05565 58d890add3c26b8f74952ad35b29a60b 273 SUPERFAMILY SSF52096 16 273 3.37E-57 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS05565 58d890add3c26b8f74952ad35b29a60b 273 PANTHER PTHR11941 12 273 2.1E-53 T 19-04-2016 ALIDE2_RS05565 58d890add3c26b8f74952ad35b29a60b 273 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 108 128 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS06980 f71ff0935bb463752742564e67924702 507 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 345 506 4.4E-45 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS06980 f71ff0935bb463752742564e67924702 507 SMART SM00267 336 507 8.5E-51 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS06980 f71ff0935bb463752742564e67924702 507 PANTHER PTHR10799:SF710 234 503 1.3E-20 T 19-04-2016 ALIDE2_RS06980 f71ff0935bb463752742564e67924702 507 PANTHER PTHR10799 234 503 1.3E-20 T 19-04-2016 ALIDE2_RS06980 f71ff0935bb463752742564e67924702 507 SUPERFAMILY SSF55073 352 505 1.33E-42 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS06980 f71ff0935bb463752742564e67924702 507 Gene3D G3DSA:3.30.70.270 348 505 3.1E-48 T 19-04-2016 ALIDE2_RS06980 f71ff0935bb463752742564e67924702 507 Pfam PF00990 Diguanylate cyclase, GGDEF domain 347 503 5.5E-39 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS07950 e7ab419368b8af40363bebdd1af382be 195 Pfam PF10502 Signal peptidase, peptidase S26 46 191 7.8E-53 T 19-04-2016 IPR019533 Peptidase S26 ALIDE2_RS07950 e7ab419368b8af40363bebdd1af382be 195 Gene3D G3DSA:2.10.109.10 71 115 1.2E-9 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS07950 e7ab419368b8af40363bebdd1af382be 195 Gene3D G3DSA:2.10.109.10 153 192 1.2E-9 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS07950 e7ab419368b8af40363bebdd1af382be 195 SUPERFAMILY SSF51306 53 190 1.1E-20 T 19-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C ALIDE2_RS11970 d610a51ec39707d6755f0485a703883e 112 PANTHER PTHR23426 7 112 3.8E-37 T 19-04-2016 ALIDE2_RS11970 d610a51ec39707d6755f0485a703883e 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 19-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 ALIDE2_RS11970 d610a51ec39707d6755f0485a703883e 112 Gene3D G3DSA:3.10.20.30 7 103 7.9E-32 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS11970 d610a51ec39707d6755f0485a703883e 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 1.2E-53 T 19-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 ALIDE2_RS11970 d610a51ec39707d6755f0485a703883e 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 2.1E-12 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS11970 d610a51ec39707d6755f0485a703883e 112 SUPERFAMILY SSF54292 6 108 3.46E-30 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS11970 d610a51ec39707d6755f0485a703883e 112 PRINTS PR00355 Adrenodoxin signature 60 74 1.6E-9 T 19-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 ALIDE2_RS11970 d610a51ec39707d6755f0485a703883e 112 PRINTS PR00355 Adrenodoxin signature 42 52 1.6E-9 T 19-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 ALIDE2_RS11970 d610a51ec39707d6755f0485a703883e 112 PRINTS PR00355 Adrenodoxin signature 83 91 1.6E-9 T 19-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 ALIDE2_RS00655 8443696451231e42344bf07f81000c72 515 Gene3D G3DSA:3.30.300.30 403 507 2.5E-29 T 19-04-2016 ALIDE2_RS00655 8443696451231e42344bf07f81000c72 515 ProSitePatterns PS00455 Putative AMP-binding domain signature. 154 165 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS00655 8443696451231e42344bf07f81000c72 515 Gene3D G3DSA:3.40.50.980 7 161 5.8E-27 T 19-04-2016 ALIDE2_RS00655 8443696451231e42344bf07f81000c72 515 SUPERFAMILY SSF56801 4 505 2.35E-121 T 19-04-2016 ALIDE2_RS00655 8443696451231e42344bf07f81000c72 515 Pfam PF00501 AMP-binding enzyme 7 404 1.5E-69 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS00655 8443696451231e42344bf07f81000c72 515 Pfam PF13193 AMP-binding enzyme C-terminal domain 414 492 8.4E-20 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS00655 8443696451231e42344bf07f81000c72 515 PANTHER PTHR24096 11 502 1.2E-175 T 19-04-2016 ALIDE2_RS00655 8443696451231e42344bf07f81000c72 515 Gene3D G3DSA:2.30.38.10 327 395 3.6E-16 T 19-04-2016 ALIDE2_RS00655 8443696451231e42344bf07f81000c72 515 PANTHER PTHR24096:SF106 11 502 1.2E-175 T 19-04-2016 ALIDE2_RS00655 8443696451231e42344bf07f81000c72 515 Gene3D G3DSA:3.40.50.980 162 326 1.6E-36 T 19-04-2016 ALIDE2_RS09360 3b294110736b9fc77656ccdc7514a746 103 PANTHER PTHR13943:SF48 7 96 2.6E-16 T 19-04-2016 ALIDE2_RS09360 3b294110736b9fc77656ccdc7514a746 103 PANTHER PTHR13943 7 96 2.6E-16 T 19-04-2016 ALIDE2_RS07045 a211bedf5d4748c6258aa5552cf6d382 226 Pfam PF09976 Tetratricopeptide repeat-like domain 17 210 1.9E-53 T 19-04-2016 IPR018704 Tetratricopeptide repeat-like domain ALIDE2_RS07045 a211bedf5d4748c6258aa5552cf6d382 226 PIRSF PIRSF006170 3 215 6.9E-53 T 19-04-2016 IPR026039 Uncharacterised protein family UPF0070 ALIDE2_RS07045 a211bedf5d4748c6258aa5552cf6d382 226 PANTHER PTHR38035 4 211 7.0E-26 T 19-04-2016 ALIDE2_RS09920 315e4aa659e8b92da67f868f838dba8e 336 Gene3D G3DSA:3.40.50.720 2 115 7.1E-32 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS09920 315e4aa659e8b92da67f868f838dba8e 336 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 19-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ALIDE2_RS09920 315e4aa659e8b92da67f868f838dba8e 336 PANTHER PTHR10996 1 329 3.4E-98 T 19-04-2016 ALIDE2_RS09920 315e4aa659e8b92da67f868f838dba8e 336 SUPERFAMILY SSF52283 1 137 7.75E-33 T 19-04-2016 ALIDE2_RS09920 315e4aa659e8b92da67f868f838dba8e 336 Gene3D G3DSA:3.40.50.720 116 297 5.4E-55 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS09920 315e4aa659e8b92da67f868f838dba8e 336 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 327 1.6E-28 T 19-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS09920 315e4aa659e8b92da67f868f838dba8e 336 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 295 4.7E-51 T 19-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ALIDE2_RS09920 315e4aa659e8b92da67f868f838dba8e 336 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 19-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ALIDE2_RS09920 315e4aa659e8b92da67f868f838dba8e 336 SUPERFAMILY SSF51735 103 296 8.98E-52 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS06465 5b4f5a90488c4018ead718ba6e2d7fa9 211 SMART SM00464 9 206 8.2E-10 T 19-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 ALIDE2_RS06465 5b4f5a90488c4018ead718ba6e2d7fa9 211 SUPERFAMILY SSF88697 9 205 9.19E-48 T 19-04-2016 IPR015947 PUA-like domain ALIDE2_RS06465 5b4f5a90488c4018ead718ba6e2d7fa9 211 PANTHER PTHR23327:SF0 4 142 8.4E-18 T 19-04-2016 ALIDE2_RS06465 5b4f5a90488c4018ead718ba6e2d7fa9 211 PANTHER PTHR23327 4 142 8.4E-18 T 19-04-2016 ALIDE2_RS06465 5b4f5a90488c4018ead718ba6e2d7fa9 211 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 206 9.2E-23 T 19-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 ALIDE2_RS02270 6b45a1c1e7a852331bb401326482564f 433 PANTHER PTHR38442 17 427 8.5E-106 T 19-04-2016 ALIDE2_RS02270 6b45a1c1e7a852331bb401326482564f 433 Pfam PF04286 Protein of unknown function (DUF445) 50 422 7.6E-94 T 19-04-2016 IPR007383 Protein of unknown function DUF445 ALIDE2_RS03905 aca6e2448de3dcbaa484a6d59811d3c6 273 PANTHER PTHR35563 1 273 1.3E-51 T 19-04-2016 ALIDE2_RS03905 aca6e2448de3dcbaa484a6d59811d3c6 273 Pfam PF04909 Amidohydrolase 6 273 1.1E-31 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 ALIDE2_RS03905 aca6e2448de3dcbaa484a6d59811d3c6 273 PANTHER PTHR35563:SF1 1 273 1.3E-51 T 19-04-2016 ALIDE2_RS03905 aca6e2448de3dcbaa484a6d59811d3c6 273 Gene3D G3DSA:3.20.20.140 3 273 4.5E-73 T 19-04-2016 ALIDE2_RS03905 aca6e2448de3dcbaa484a6d59811d3c6 273 SUPERFAMILY SSF51556 3 273 1.74E-59 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS06025 14e3056a57052399491b49568a89829b 487 PANTHER PTHR11895 13 484 1.0E-164 T 19-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS06025 14e3056a57052399491b49568a89829b 487 Gene3D G3DSA:3.90.1300.10 13 483 6.4E-110 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS06025 14e3056a57052399491b49568a89829b 487 SUPERFAMILY SSF75304 13 483 6.02E-114 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS06025 14e3056a57052399491b49568a89829b 487 PANTHER PTHR11895:SF76 13 484 1.0E-164 T 19-04-2016 ALIDE2_RS06025 14e3056a57052399491b49568a89829b 487 Pfam PF01425 Amidase 34 466 4.5E-83 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS03765 e9a2381a8c5b3566085c1ad2bd2d9774 164 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 30 52 3.1E-7 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03765 e9a2381a8c5b3566085c1ad2bd2d9774 164 Gene3D G3DSA:3.30.700.10 34 98 3.5E-11 T 19-04-2016 ALIDE2_RS03765 e9a2381a8c5b3566085c1ad2bd2d9774 164 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 32 53 9.9E-8 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03765 e9a2381a8c5b3566085c1ad2bd2d9774 164 SUPERFAMILY SSF54523 60 163 1.1E-37 T 19-04-2016 ALIDE2_RS03765 e9a2381a8c5b3566085c1ad2bd2d9774 164 PRINTS PR00813 Bacterial general secretion pathway protein G signature 33 58 8.2E-18 T 19-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ALIDE2_RS03765 e9a2381a8c5b3566085c1ad2bd2d9774 164 PRINTS PR00813 Bacterial general secretion pathway protein G signature 69 87 8.2E-18 T 19-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ALIDE2_RS03765 e9a2381a8c5b3566085c1ad2bd2d9774 164 PANTHER PTHR30093:SF9 24 164 1.7E-60 T 19-04-2016 ALIDE2_RS03765 e9a2381a8c5b3566085c1ad2bd2d9774 164 Pfam PF08334 Type II secretion system (T2SS), protein G 56 163 5.0E-43 T 19-04-2016 IPR013545 Type II secretion system protein G ALIDE2_RS03765 e9a2381a8c5b3566085c1ad2bd2d9774 164 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 32 52 - T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03765 e9a2381a8c5b3566085c1ad2bd2d9774 164 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 33 164 6.5E-56 T 19-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 ALIDE2_RS03765 e9a2381a8c5b3566085c1ad2bd2d9774 164 PANTHER PTHR30093 24 164 1.7E-60 T 19-04-2016 ALIDE2_RS07545 58ccbe7526ff58f971e226a891def35e 264 SUPERFAMILY SSF55781 80 259 1.83E-34 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS07545 58ccbe7526ff58f971e226a891def35e 264 PANTHER PTHR30136 4 258 1.4E-50 T 19-04-2016 ALIDE2_RS07545 58ccbe7526ff58f971e226a891def35e 264 PANTHER PTHR30136:SF4 4 258 1.4E-50 T 19-04-2016 ALIDE2_RS07545 58ccbe7526ff58f971e226a891def35e 264 Gene3D G3DSA:1.10.10.10 9 83 1.0E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07545 58ccbe7526ff58f971e226a891def35e 264 Pfam PF09339 IclR helix-turn-helix domain 15 65 1.3E-16 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS07545 58ccbe7526ff58f971e226a891def35e 264 Gene3D G3DSA:3.30.450.40 84 258 1.3E-33 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS07545 58ccbe7526ff58f971e226a891def35e 264 SMART SM00346 13 103 1.9E-17 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS07545 58ccbe7526ff58f971e226a891def35e 264 Pfam PF01614 Bacterial transcriptional regulator 133 254 1.8E-8 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS07545 58ccbe7526ff58f971e226a891def35e 264 SUPERFAMILY SSF46785 15 85 1.04E-12 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06765 d11e81c12cea2767f04a0987f7ca8fbe 596 SUPERFAMILY SSF56235 58 596 4.63E-195 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS06765 d11e81c12cea2767f04a0987f7ca8fbe 596 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 66 587 4.0E-201 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS06765 d11e81c12cea2767f04a0987f7ca8fbe 596 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 408 432 - T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS06765 d11e81c12cea2767f04a0987f7ca8fbe 596 PANTHER PTHR11686:SF9 59 596 2.8E-233 T 19-04-2016 ALIDE2_RS06765 d11e81c12cea2767f04a0987f7ca8fbe 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 180 199 1.9E-79 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS06765 d11e81c12cea2767f04a0987f7ca8fbe 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 88 113 1.9E-79 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS06765 d11e81c12cea2767f04a0987f7ca8fbe 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 497 514 1.9E-79 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS06765 d11e81c12cea2767f04a0987f7ca8fbe 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 473 488 1.9E-79 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS06765 d11e81c12cea2767f04a0987f7ca8fbe 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 408 426 1.9E-79 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS06765 d11e81c12cea2767f04a0987f7ca8fbe 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 308 327 1.9E-79 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS06765 d11e81c12cea2767f04a0987f7ca8fbe 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 162 180 1.9E-79 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS06765 d11e81c12cea2767f04a0987f7ca8fbe 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 432 450 1.9E-79 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS06765 d11e81c12cea2767f04a0987f7ca8fbe 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 278 294 1.9E-79 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS06765 d11e81c12cea2767f04a0987f7ca8fbe 596 Pfam PF01019 Gamma-glutamyltranspeptidase 81 588 2.7E-193 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS06765 d11e81c12cea2767f04a0987f7ca8fbe 596 PANTHER PTHR11686 59 596 2.8E-233 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS21210 6691c89056da15399246b54ce91e926e 587 Gene3D G3DSA:3.50.50.60 7 71 7.9E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS21210 6691c89056da15399246b54ce91e926e 587 Gene3D G3DSA:3.50.50.60 289 369 7.9E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS21210 6691c89056da15399246b54ce91e926e 587 Gene3D G3DSA:3.50.50.60 111 195 7.9E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS21210 6691c89056da15399246b54ce91e926e 587 PANTHER PTHR13789 1 442 3.3E-98 T 19-04-2016 ALIDE2_RS21210 6691c89056da15399246b54ce91e926e 587 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 2.2E-42 T 19-04-2016 ALIDE2_RS21210 6691c89056da15399246b54ce91e926e 587 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 334 352 2.2E-42 T 19-04-2016 ALIDE2_RS21210 6691c89056da15399246b54ce91e926e 587 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 316 2.2E-42 T 19-04-2016 ALIDE2_RS21210 6691c89056da15399246b54ce91e926e 587 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 169 184 2.2E-42 T 19-04-2016 ALIDE2_RS21210 6691c89056da15399246b54ce91e926e 587 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 352 368 2.2E-42 T 19-04-2016 ALIDE2_RS21210 6691c89056da15399246b54ce91e926e 587 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 316 332 2.2E-42 T 19-04-2016 ALIDE2_RS21210 6691c89056da15399246b54ce91e926e 587 PANTHER PTHR13789:SF226 1 442 3.3E-98 T 19-04-2016 ALIDE2_RS21210 6691c89056da15399246b54ce91e926e 587 Pfam PF01494 FAD binding domain 5 367 5.2E-107 T 19-04-2016 IPR002938 FAD-binding domain GO:0071949 ALIDE2_RS21210 6691c89056da15399246b54ce91e926e 587 SUPERFAMILY SSF51905 6 190 4.67E-50 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS21210 6691c89056da15399246b54ce91e926e 587 SUPERFAMILY SSF51905 288 379 4.67E-50 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS05640 4780722523be2ab2c4c4d6155dd3dbe5 415 Gene3D G3DSA:1.10.3210.10 145 278 3.7E-10 T 19-04-2016 IPR006674 HD domain ALIDE2_RS05640 4780722523be2ab2c4c4d6155dd3dbe5 415 TIGRFAM TIGR00277 HDIG: HDIG domain 156 247 3.5E-7 T 19-04-2016 IPR006675 HDIG domain ALIDE2_RS05640 4780722523be2ab2c4c4d6155dd3dbe5 415 Pfam PF13487 HD domain 210 270 1.8E-10 T 19-04-2016 ALIDE2_RS05640 4780722523be2ab2c4c4d6155dd3dbe5 415 SMART SM00471 153 288 5.5E-4 T 19-04-2016 IPR003607 HD/PDEase domain ALIDE2_RS05640 4780722523be2ab2c4c4d6155dd3dbe5 415 Pfam PF11871 Domain of unknown function (DUF3391) 1 121 1.1E-15 T 19-04-2016 IPR021812 Protein of unknown function DUF3391 ALIDE2_RS05640 4780722523be2ab2c4c4d6155dd3dbe5 415 SUPERFAMILY SSF109604 151 318 1.23E-20 T 19-04-2016 ALIDE2_RS06475 4ab06cd28b59110c168b43b25c621f95 290 Gene3D G3DSA:3.90.226.10 21 287 1.9E-69 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS06475 4ab06cd28b59110c168b43b25c621f95 290 PANTHER PTHR22855 1 286 5.8E-147 T 19-04-2016 ALIDE2_RS06475 4ab06cd28b59110c168b43b25c621f95 290 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 283 37.192 T 19-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS06475 4ab06cd28b59110c168b43b25c621f95 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 2.0E-36 T 19-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS06475 4ab06cd28b59110c168b43b25c621f95 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 2.0E-36 T 19-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS06475 4ab06cd28b59110c168b43b25c621f95 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 2.0E-36 T 19-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS06475 4ab06cd28b59110c168b43b25c621f95 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 2.0E-36 T 19-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS06475 4ab06cd28b59110c168b43b25c621f95 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 2.0E-36 T 19-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS06475 4ab06cd28b59110c168b43b25c621f95 290 SUPERFAMILY SSF52096 27 282 1.9E-81 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS06475 4ab06cd28b59110c168b43b25c621f95 290 Pfam PF01039 Carboxyl transferase domain 104 281 3.4E-15 T 19-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS06475 4ab06cd28b59110c168b43b25c621f95 290 PANTHER PTHR22855:SF17 1 286 5.8E-147 T 19-04-2016 ALIDE2_RS06475 4ab06cd28b59110c168b43b25c621f95 290 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 285 2.6E-118 T 19-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS03880 cdbcf2bec68440ef47d1f4c9389541ec 289 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 280 3.1E-56 T 19-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ALIDE2_RS03880 cdbcf2bec68440ef47d1f4c9389541ec 289 PIRSF PIRSF026649 1 289 7.2E-72 T 19-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ALIDE2_RS03880 cdbcf2bec68440ef47d1f4c9389541ec 289 PANTHER PTHR30606:SF5 6 289 4.3E-66 T 19-04-2016 ALIDE2_RS03880 cdbcf2bec68440ef47d1f4c9389541ec 289 PANTHER PTHR30606 6 289 4.3E-66 T 19-04-2016 ALIDE2_RS08090 f3f1d779719b411ea2bf5e2d839a3c35 400 Pfam PF13356 Domain of unknown function (DUF4102) 6 93 9.8E-15 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 ALIDE2_RS08090 f3f1d779719b411ea2bf5e2d839a3c35 400 SUPERFAMILY SSF56349 98 378 5.3E-58 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS08090 f3f1d779719b411ea2bf5e2d839a3c35 400 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 99 150 8.2E-9 T 19-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ALIDE2_RS08090 f3f1d779719b411ea2bf5e2d839a3c35 400 PANTHER PTHR30629 1 378 2.5E-39 T 19-04-2016 ALIDE2_RS08090 f3f1d779719b411ea2bf5e2d839a3c35 400 Gene3D G3DSA:1.10.443.10 203 378 1.4E-29 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS08090 f3f1d779719b411ea2bf5e2d839a3c35 400 Gene3D G3DSA:1.10.150.130 99 193 1.8E-13 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS08090 f3f1d779719b411ea2bf5e2d839a3c35 400 PANTHER PTHR30629:SF2 1 378 2.5E-39 T 19-04-2016 ALIDE2_RS08090 f3f1d779719b411ea2bf5e2d839a3c35 400 Pfam PF00589 Phage integrase family 205 370 3.7E-17 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS12825 0d66aa10c1e9149ceec6e9e01523ec1d 425 PANTHER PTHR30483 6 385 9.2E-40 T 19-04-2016 ALIDE2_RS12825 0d66aa10c1e9149ceec6e9e01523ec1d 425 Pfam PF13458 Periplasmic binding protein 33 383 6.7E-67 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS12825 0d66aa10c1e9149ceec6e9e01523ec1d 425 SUPERFAMILY SSF53822 33 384 6.06E-66 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS12825 0d66aa10c1e9149ceec6e9e01523ec1d 425 Gene3D G3DSA:3.40.50.2300 29 167 2.1E-29 T 19-04-2016 ALIDE2_RS12825 0d66aa10c1e9149ceec6e9e01523ec1d 425 Gene3D G3DSA:3.40.50.2300 320 375 2.1E-29 T 19-04-2016 ALIDE2_RS12825 0d66aa10c1e9149ceec6e9e01523ec1d 425 Gene3D G3DSA:3.40.50.2300 168 319 9.3E-23 T 19-04-2016 ALIDE2_RS04885 19dcf2192c6036da3929847e0d8262eb 329 PANTHER PTHR30349 8 329 4.9E-85 T 19-04-2016 ALIDE2_RS04885 19dcf2192c6036da3929847e0d8262eb 329 PANTHER PTHR30349:SF16 8 329 4.9E-85 T 19-04-2016 ALIDE2_RS04885 19dcf2192c6036da3929847e0d8262eb 329 Gene3D G3DSA:3.40.190.10 130 238 3.5E-5 T 19-04-2016 ALIDE2_RS04885 19dcf2192c6036da3929847e0d8262eb 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 326 5.6E-90 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS04885 19dcf2192c6036da3929847e0d8262eb 329 SUPERFAMILY SSF53850 124 289 6.25E-14 T 19-04-2016 ALIDE2_RS04885 19dcf2192c6036da3929847e0d8262eb 329 PIRSF PIRSF017082 3 329 3.1E-86 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS04615 419bb72454118be184817dfddf915586 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 17 244 3.3E-19 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase ALIDE2_RS04615 419bb72454118be184817dfddf915586 253 Gene3D G3DSA:3.60.10.10 14 181 1.0E-18 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase ALIDE2_RS04615 419bb72454118be184817dfddf915586 253 PANTHER PTHR15822 14 253 1.2E-35 T 19-04-2016 ALIDE2_RS04615 419bb72454118be184817dfddf915586 253 SUPERFAMILY SSF56219 14 251 1.44E-47 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase ALIDE2_RS04615 419bb72454118be184817dfddf915586 253 PANTHER PTHR15822:SF7 14 253 1.2E-35 T 19-04-2016 ALIDE2_RS09340 1d1b6399e7eef303f7a0b3b672b201a6 270 SMART SM00346 24 115 3.6E-12 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS09340 1d1b6399e7eef303f7a0b3b672b201a6 270 Pfam PF01614 Bacterial transcriptional regulator 143 228 3.1E-7 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS09340 1d1b6399e7eef303f7a0b3b672b201a6 270 PANTHER PTHR30136:SF10 1 270 2.2E-33 T 19-04-2016 ALIDE2_RS09340 1d1b6399e7eef303f7a0b3b672b201a6 270 Gene3D G3DSA:1.10.10.10 22 95 1.2E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS09340 1d1b6399e7eef303f7a0b3b672b201a6 270 SUPERFAMILY SSF55781 92 267 2.75E-27 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS09340 1d1b6399e7eef303f7a0b3b672b201a6 270 Gene3D G3DSA:3.30.450.40 96 267 2.6E-25 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS09340 1d1b6399e7eef303f7a0b3b672b201a6 270 Pfam PF09339 IclR helix-turn-helix domain 26 74 2.6E-8 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS09340 1d1b6399e7eef303f7a0b3b672b201a6 270 PANTHER PTHR30136 1 270 2.2E-33 T 19-04-2016 ALIDE2_RS09340 1d1b6399e7eef303f7a0b3b672b201a6 270 SUPERFAMILY SSF46785 24 98 1.24E-9 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06065 e4dbc1d93da4730aef4d9517ed894e3b 123 SUPERFAMILY SSF46458 11 118 2.26E-19 T 19-04-2016 IPR009050 Globin-like ALIDE2_RS06065 e4dbc1d93da4730aef4d9517ed894e3b 123 Gene3D G3DSA:1.10.490.10 11 118 8.9E-15 T 19-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 ALIDE2_RS13470 c5e2388bbcd73609d7bdde4d6370445c 470 Pfam PF07732 Multicopper oxidase 87 195 2.4E-34 T 19-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 ALIDE2_RS13470 c5e2388bbcd73609d7bdde4d6370445c 470 PANTHER PTHR11709:SF33 85 286 5.1E-38 T 19-04-2016 ALIDE2_RS13470 c5e2388bbcd73609d7bdde4d6370445c 470 PANTHER PTHR11709 85 286 5.1E-38 T 19-04-2016 ALIDE2_RS13470 c5e2388bbcd73609d7bdde4d6370445c 470 Gene3D G3DSA:2.60.40.420 45 190 1.9E-37 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS13470 c5e2388bbcd73609d7bdde4d6370445c 470 ProSitePatterns PS00080 Multicopper oxidases signature 2. 320 331 - T 19-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 ALIDE2_RS13470 c5e2388bbcd73609d7bdde4d6370445c 470 SUPERFAMILY SSF49503 63 196 3.13E-36 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS13470 c5e2388bbcd73609d7bdde4d6370445c 470 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 29 1.4E-4 T 19-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ALIDE2_RS13470 c5e2388bbcd73609d7bdde4d6370445c 470 Gene3D G3DSA:2.60.40.420 200 331 9.6E-26 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS13470 c5e2388bbcd73609d7bdde4d6370445c 470 Pfam PF07731 Multicopper oxidase 221 334 1.0E-21 T 19-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 ALIDE2_RS13470 c5e2388bbcd73609d7bdde4d6370445c 470 SUPERFAMILY SSF49503 171 332 9.99E-32 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS20485 2a1e607ee753cb93ef9b386d641ba03d 102 Pfam PF04341 Protein of unknown function, DUF485 10 97 1.1E-33 T 19-04-2016 IPR007436 Protein of unknown function DUF485 ALIDE2_RS20485 2a1e607ee753cb93ef9b386d641ba03d 102 PANTHER PTHR38598 2 100 1.2E-35 T 19-04-2016 ALIDE2_RS19970 a774b37bf17176b6e05b298ab1976bdc 646 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 18 642 27.17 T 19-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 ALIDE2_RS19970 a774b37bf17176b6e05b298ab1976bdc 646 Gene3D G3DSA:3.30.565.10 19 215 3.9E-67 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS19970 a774b37bf17176b6e05b298ab1976bdc 646 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 232 348 1.1E-36 T 19-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS19970 a774b37bf17176b6e05b298ab1976bdc 646 PANTHER PTHR10073 20 642 2.7E-141 T 19-04-2016 ALIDE2_RS19970 a774b37bf17176b6e05b298ab1976bdc 646 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 41 143 4.5E-11 T 19-04-2016 ALIDE2_RS19970 a774b37bf17176b6e05b298ab1976bdc 646 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 19 329 3.4E-88 T 19-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS19970 a774b37bf17176b6e05b298ab1976bdc 646 SUPERFAMILY SSF118116 453 644 2.62E-59 T 19-04-2016 ALIDE2_RS19970 a774b37bf17176b6e05b298ab1976bdc 646 SMART SM00853 458 602 1.6E-55 T 19-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 ALIDE2_RS19970 a774b37bf17176b6e05b298ab1976bdc 646 SUPERFAMILY SSF54211 225 349 1.78E-33 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS19970 a774b37bf17176b6e05b298ab1976bdc 646 Pfam PF08676 MutL C terminal dimerisation domain 454 602 5.5E-49 T 19-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 ALIDE2_RS19970 a774b37bf17176b6e05b298ab1976bdc 646 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 110 116 - T 19-04-2016 IPR014762 DNA mismatch repair, conserved site ALIDE2_RS19970 a774b37bf17176b6e05b298ab1976bdc 646 Gene3D G3DSA:3.30.230.10 224 348 3.3E-38 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALIDE2_RS19970 a774b37bf17176b6e05b298ab1976bdc 646 SUPERFAMILY SSF55874 18 213 8.77E-50 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS19970 a774b37bf17176b6e05b298ab1976bdc 646 SMART SM01340 231 349 6.2E-54 T 19-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 ALIDE2_RS09250 517e3bcfcaa7eb0d6a40272059852637 141 SUPERFAMILY SSF46785 23 89 1.67E-10 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS09250 517e3bcfcaa7eb0d6a40272059852637 141 Pfam PF09339 IclR helix-turn-helix domain 22 71 1.8E-9 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS09250 517e3bcfcaa7eb0d6a40272059852637 141 Gene3D G3DSA:1.10.10.10 22 86 8.0E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS09250 517e3bcfcaa7eb0d6a40272059852637 141 SMART SM00346 20 107 0.0025 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS08450 449b41d7ee7940bbe9f283ae7735e341 275 PANTHER PTHR30151:SF0 9 273 7.0E-94 T 19-04-2016 ALIDE2_RS08450 449b41d7ee7940bbe9f283ae7735e341 275 PANTHER PTHR30151 9 273 7.0E-94 T 19-04-2016 ALIDE2_RS08450 449b41d7ee7940bbe9f283ae7735e341 275 Gene3D G3DSA:1.10.3720.10 73 269 3.0E-20 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS08450 449b41d7ee7940bbe9f283ae7735e341 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 269 2.0E-25 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS08450 449b41d7ee7940bbe9f283ae7735e341 275 SUPERFAMILY SSF161098 78 261 4.45E-28 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS12645 5b3ae6da851f1b8516820f418885cf78 323 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 30 309 1.3E-92 T 19-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 ALIDE2_RS12645 5b3ae6da851f1b8516820f418885cf78 323 SUPERFAMILY SSF53850 139 270 6.37E-5 T 19-04-2016 ALIDE2_RS12645 5b3ae6da851f1b8516820f418885cf78 323 PIRSF PIRSF006470 1 323 6.7E-105 T 19-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 ALIDE2_RS12645 5b3ae6da851f1b8516820f418885cf78 323 PANTHER PTHR33376 16 321 5.9E-93 T 19-04-2016 ALIDE2_RS12645 5b3ae6da851f1b8516820f418885cf78 323 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 31 282 3.4E-80 T 19-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 ALIDE2_RS12645 5b3ae6da851f1b8516820f418885cf78 323 PANTHER PTHR33376:SF2 16 321 5.9E-93 T 19-04-2016 ALIDE2_RS18405 3f09edbaf4abc681621a96169c8d97f8 193 Gene3D G3DSA:3.40.50.170 1 192 5.1E-64 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ALIDE2_RS18405 3f09edbaf4abc681621a96169c8d97f8 193 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 1.8E-68 T 19-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 ALIDE2_RS18405 3f09edbaf4abc681621a96169c8d97f8 193 Pfam PF00551 Formyl transferase 2 186 1.8E-55 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ALIDE2_RS18405 3f09edbaf4abc681621a96169c8d97f8 193 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 192 30.296 T 19-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 ALIDE2_RS18405 3f09edbaf4abc681621a96169c8d97f8 193 SUPERFAMILY SSF53328 2 191 8.77E-59 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ALIDE2_RS18405 3f09edbaf4abc681621a96169c8d97f8 193 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 138 161 - T 19-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ALIDE2_RS18405 3f09edbaf4abc681621a96169c8d97f8 193 PANTHER PTHR10520 1 191 4.8E-86 T 19-04-2016 ALIDE2_RS01485 87b8cdea95587f8344dd9af7c3440913 297 PIRSF PIRSF000103 1 297 1.1E-62 T 19-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 ALIDE2_RS01485 87b8cdea95587f8344dd9af7c3440913 297 SUPERFAMILY SSF48179 170 295 8.28E-29 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS01485 87b8cdea95587f8344dd9af7c3440913 297 SUPERFAMILY SSF51735 9 168 2.8E-34 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS01485 87b8cdea95587f8344dd9af7c3440913 297 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 171 286 5.1E-25 T 19-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ALIDE2_RS01485 87b8cdea95587f8344dd9af7c3440913 297 Gene3D G3DSA:1.10.1040.10 171 294 9.8E-29 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS01485 87b8cdea95587f8344dd9af7c3440913 297 Gene3D G3DSA:3.40.50.720 6 169 2.7E-45 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS01485 87b8cdea95587f8344dd9af7c3440913 297 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 167 7.2E-38 T 19-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 ALIDE2_RS01485 87b8cdea95587f8344dd9af7c3440913 297 PANTHER PTHR22981 9 293 2.1E-70 T 19-04-2016 ALIDE2_RS12900 84816d6b9de356cbfaa4458928aa4998 407 PANTHER PTHR23515:SF4 5 396 2.7E-128 T 19-04-2016 ALIDE2_RS12900 84816d6b9de356cbfaa4458928aa4998 407 Pfam PF07690 Major Facilitator Superfamily 20 329 3.8E-34 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS12900 84816d6b9de356cbfaa4458928aa4998 407 Gene3D G3DSA:1.20.1250.20 212 388 1.0E-14 T 19-04-2016 ALIDE2_RS12900 84816d6b9de356cbfaa4458928aa4998 407 Gene3D G3DSA:1.20.1250.20 15 197 9.3E-23 T 19-04-2016 ALIDE2_RS12900 84816d6b9de356cbfaa4458928aa4998 407 SUPERFAMILY SSF103473 4 394 9.94E-54 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS12900 84816d6b9de356cbfaa4458928aa4998 407 PANTHER PTHR23515 5 396 2.7E-128 T 19-04-2016 ALIDE2_RS07915 9abb23c0adb7a17f015c53cc6ff76188 371 PANTHER PTHR30294 5 369 6.9E-85 T 19-04-2016 ALIDE2_RS07915 9abb23c0adb7a17f015c53cc6ff76188 371 PANTHER PTHR30294:SF12 5 369 6.9E-85 T 19-04-2016 ALIDE2_RS07915 9abb23c0adb7a17f015c53cc6ff76188 371 Pfam PF12698 ABC-2 family transporter protein 32 363 1.8E-38 T 19-04-2016 ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 SMART SM00388 459 536 2.9E-5 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 SUPERFAMILY SSF47384 452 533 9.61E-8 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 Gene3D G3DSA:1.10.287.130 455 532 1.2E-4 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 321 442 1.0E-20 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 642 652 2.4E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 690 2.4E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 671 2.4E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 624 638 2.4E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 Pfam PF00989 PAS fold 322 434 3.8E-14 T 19-04-2016 IPR013767 PAS fold GO:0006355 ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 SMART SM00086 395 437 6.7E-4 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 SUPERFAMILY SSF55785 331 437 4.83E-21 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 Gene3D G3DSA:3.30.565.10 538 691 4.9E-36 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 SMART SM00387 578 693 9.9E-25 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 SUPERFAMILY SSF55874 539 690 2.23E-35 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 691 4.0E-17 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 Gene3D G3DSA:3.30.450.20 307 435 1.9E-18 T 19-04-2016 ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 PANTHER PTHR24423 304 696 1.1E-69 T 19-04-2016 ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 PANTHER PTHR24423 25 36 1.1E-69 T 19-04-2016 ALIDE2_RS22720 0a22ed5a004a391dfb6c546ef4898355 697 SMART SM00091 320 386 2.0E-6 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS24120 5e954199fc6bf736eba509ecfce64c72 137 Pfam PF02515 CoA-transferase family III 1 127 3.2E-47 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS24120 5e954199fc6bf736eba509ecfce64c72 137 SUPERFAMILY SSF89796 1 127 3.53E-48 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS24120 5e954199fc6bf736eba509ecfce64c72 137 Gene3D G3DSA:3.40.50.10540 1 127 3.2E-47 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS18530 84645ab99ab11202e71e920d31aaf0ea 588 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 403 417 - T 19-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ALIDE2_RS18530 84645ab99ab11202e71e920d31aaf0ea 588 SUPERFAMILY SSF160246 13 161 1.28E-13 T 19-04-2016 ALIDE2_RS18530 84645ab99ab11202e71e920d31aaf0ea 588 Gene3D G3DSA:3.30.450.90 192 308 2.9E-43 T 19-04-2016 ALIDE2_RS18530 84645ab99ab11202e71e920d31aaf0ea 588 PANTHER PTHR30258:SF13 11 585 2.8E-239 T 19-04-2016 ALIDE2_RS18530 84645ab99ab11202e71e920d31aaf0ea 588 Pfam PF00437 Type II/IV secretion system protein 214 475 1.1E-72 T 19-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ALIDE2_RS18530 84645ab99ab11202e71e920d31aaf0ea 588 SUPERFAMILY SSF52540 198 582 1.4E-94 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18530 84645ab99ab11202e71e920d31aaf0ea 588 SMART SM00382 336 457 8.2E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS18530 84645ab99ab11202e71e920d31aaf0ea 588 PANTHER PTHR30258 11 585 2.8E-239 T 19-04-2016 ALIDE2_RS18530 84645ab99ab11202e71e920d31aaf0ea 588 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 24 165 1.1E-13 T 19-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 ALIDE2_RS18530 84645ab99ab11202e71e920d31aaf0ea 588 Gene3D G3DSA:3.40.50.300 313 584 5.7E-91 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05740 b683a7b0cee4d97b985eaef826db5b45 331 PIRSF PIRSF017082 3 329 3.5E-80 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS05740 b683a7b0cee4d97b985eaef826db5b45 331 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 326 1.3E-82 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS05740 b683a7b0cee4d97b985eaef826db5b45 331 PANTHER PTHR30349 8 322 3.6E-90 T 19-04-2016 ALIDE2_RS05740 b683a7b0cee4d97b985eaef826db5b45 331 SUPERFAMILY SSF53850 122 290 8.41E-10 T 19-04-2016 ALIDE2_RS05740 b683a7b0cee4d97b985eaef826db5b45 331 PANTHER PTHR30349:SF16 8 322 3.6E-90 T 19-04-2016 ALIDE2_RS08120 adad7fb48947e7602c2c20299551bea4 640 SUPERFAMILY SSF54534 266 372 9.81E-32 T 19-04-2016 ALIDE2_RS08120 adad7fb48947e7602c2c20299551bea4 640 SUPERFAMILY SSF109998 38 168 2.16E-25 T 19-04-2016 IPR027304 Trigger factor/SurA domain ALIDE2_RS08120 adad7fb48947e7602c2c20299551bea4 640 SUPERFAMILY SSF109998 202 240 2.16E-25 T 19-04-2016 IPR027304 Trigger factor/SurA domain ALIDE2_RS08120 adad7fb48947e7602c2c20299551bea4 640 PANTHER PTHR10657:SF11 242 523 7.9E-76 T 19-04-2016 ALIDE2_RS08120 adad7fb48947e7602c2c20299551bea4 640 PANTHER PTHR10657:SF11 1 170 7.9E-76 T 19-04-2016 ALIDE2_RS08120 adad7fb48947e7602c2c20299551bea4 640 Pfam PF13616 PPIC-type PPIASE domain 265 371 1.0E-30 T 19-04-2016 ALIDE2_RS08120 adad7fb48947e7602c2c20299551bea4 640 Gene3D G3DSA:3.10.50.40 262 395 5.2E-46 T 19-04-2016 ALIDE2_RS08120 adad7fb48947e7602c2c20299551bea4 640 PANTHER PTHR10657 242 523 7.9E-76 T 19-04-2016 ALIDE2_RS08120 adad7fb48947e7602c2c20299551bea4 640 PANTHER PTHR10657 1 170 7.9E-76 T 19-04-2016 ALIDE2_RS08120 adad7fb48947e7602c2c20299551bea4 640 Pfam PF13624 SurA N-terminal domain 1 165 6.6E-39 T 19-04-2016 ALIDE2_RS10600 7acc1feda5f6494b306f1f2d664676cf 414 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 414 51.676 T 19-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 ALIDE2_RS10600 7acc1feda5f6494b306f1f2d664676cf 414 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 19-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 ALIDE2_RS10600 7acc1feda5f6494b306f1f2d664676cf 414 PANTHER PTHR11680:SF9 8 413 1.2E-245 T 19-04-2016 ALIDE2_RS10600 7acc1feda5f6494b306f1f2d664676cf 414 Pfam PF00464 Serine hydroxymethyltransferase 8 381 3.2E-170 T 19-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 ALIDE2_RS10600 7acc1feda5f6494b306f1f2d664676cf 414 Gene3D G3DSA:3.90.1150.10 283 413 1.2E-55 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS10600 7acc1feda5f6494b306f1f2d664676cf 414 PIRSF PIRSF000412 1 414 5.2E-166 T 19-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 ALIDE2_RS10600 7acc1feda5f6494b306f1f2d664676cf 414 PANTHER PTHR11680 8 413 1.2E-245 T 19-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 ALIDE2_RS10600 7acc1feda5f6494b306f1f2d664676cf 414 Gene3D G3DSA:3.40.640.10 37 282 5.5E-104 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS10600 7acc1feda5f6494b306f1f2d664676cf 414 SUPERFAMILY SSF53383 6 413 2.34E-177 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS17810 8bc06f67ebf25c8f8f9ea8315a82f38d 227 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 16 222 2.2E-73 T 19-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 ALIDE2_RS17810 8bc06f67ebf25c8f8f9ea8315a82f38d 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 5.9E-19 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17810 8bc06f67ebf25c8f8f9ea8315a82f38d 227 Gene3D G3DSA:1.10.3720.10 7 224 3.6E-39 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17810 8bc06f67ebf25c8f8f9ea8315a82f38d 227 SUPERFAMILY SSF161098 5 221 2.22E-47 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17810 8bc06f67ebf25c8f8f9ea8315a82f38d 227 PANTHER PTHR30183 5 222 5.7E-67 T 19-04-2016 ALIDE2_RS15700 06839904dd36ec4d063b1242422ac41f 349 Gene3D G3DSA:3.40.190.10 133 256 6.9E-12 T 19-04-2016 ALIDE2_RS15700 06839904dd36ec4d063b1242422ac41f 349 PANTHER PTHR30024:SF8 1 266 9.7E-32 T 19-04-2016 ALIDE2_RS15700 06839904dd36ec4d063b1242422ac41f 349 SUPERFAMILY SSF53850 39 285 6.69E-34 T 19-04-2016 ALIDE2_RS15700 06839904dd36ec4d063b1242422ac41f 349 PANTHER PTHR30024 1 266 9.7E-32 T 19-04-2016 ALIDE2_RS15700 06839904dd36ec4d063b1242422ac41f 349 Pfam PF09084 NMT1/THI5 like 53 264 7.4E-16 T 19-04-2016 IPR015168 SsuA/THI5-like ALIDE2_RS14900 bd5f65a2b52a7507472014967d602755 439 Pfam PF13347 MFS/sugar transport protein 21 426 9.7E-45 T 19-04-2016 ALIDE2_RS14900 bd5f65a2b52a7507472014967d602755 439 Gene3D G3DSA:1.20.1250.20 29 216 8.0E-9 T 19-04-2016 ALIDE2_RS14900 bd5f65a2b52a7507472014967d602755 439 Gene3D G3DSA:1.20.1250.20 217 423 2.6E-7 T 19-04-2016 ALIDE2_RS14900 bd5f65a2b52a7507472014967d602755 439 SUPERFAMILY SSF103473 15 425 3.66E-22 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS01605 83eeeb13e4680d3934602c7ffa382430 647 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 606 1.1E-70 T 19-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ALIDE2_RS01605 83eeeb13e4680d3934602c7ffa382430 647 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 17 610 1.6E-229 T 19-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 ALIDE2_RS01605 83eeeb13e4680d3934602c7ffa382430 647 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 235 1.8E-42 T 19-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ALIDE2_RS01605 83eeeb13e4680d3934602c7ffa382430 647 Gene3D G3DSA:3.40.710.10 250 610 1.6E-109 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS01605 83eeeb13e4680d3934602c7ffa382430 647 Gene3D G3DSA:3.90.1310.10 128 249 3.1E-34 T 19-04-2016 ALIDE2_RS01605 83eeeb13e4680d3934602c7ffa382430 647 PANTHER PTHR30627 2 613 4.7E-218 T 19-04-2016 ALIDE2_RS01605 83eeeb13e4680d3934602c7ffa382430 647 SUPERFAMILY SSF56519 54 250 1.15E-47 T 19-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ALIDE2_RS01605 83eeeb13e4680d3934602c7ffa382430 647 PANTHER PTHR30627:SF2 2 613 4.7E-218 T 19-04-2016 ALIDE2_RS01605 83eeeb13e4680d3934602c7ffa382430 647 SUPERFAMILY SSF56601 251 610 9.09E-101 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS02105 5b0f0a22d8fcc006f4519525fb8118f9 91 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 3 78 1.0E-9 T 19-04-2016 IPR006450 Phage protein of unkonwn function ALIDE2_RS02105 5b0f0a22d8fcc006f4519525fb8118f9 91 Pfam PF05135 Phage gp6-like head-tail connector protein 1 88 1.6E-16 T 19-04-2016 IPR021146 Phage gp6-like head-tail connector protein ALIDE2_RS09460 508f8eb346e705669854b89b6e0292bf 121 Pfam PF11284 Protein of unknown function (DUF3085) 22 112 1.2E-34 T 19-04-2016 IPR021436 Protein of unknown function DUF3085 ALIDE2_RS09880 c7dcd83d2f0b723db5ae11e3a5209a84 674 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 17 444 7.3E-130 T 19-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS09880 c7dcd83d2f0b723db5ae11e3a5209a84 674 PANTHER PTHR21090:SF21 9 638 8.2E-161 T 19-04-2016 ALIDE2_RS09880 c7dcd83d2f0b723db5ae11e3a5209a84 674 SUPERFAMILY SSF52540 456 671 1.21E-36 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09880 c7dcd83d2f0b723db5ae11e3a5209a84 674 SUPERFAMILY SSF55205 11 444 6.67E-118 T 19-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ALIDE2_RS09880 c7dcd83d2f0b723db5ae11e3a5209a84 674 Gene3D G3DSA:3.65.10.10 250 444 8.4E-67 T 19-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 ALIDE2_RS09880 c7dcd83d2f0b723db5ae11e3a5209a84 674 Gene3D G3DSA:3.65.10.10 25 249 4.9E-66 T 19-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 ALIDE2_RS09880 c7dcd83d2f0b723db5ae11e3a5209a84 674 TIGRFAM TIGR00017 cmk: cytidylate kinase 456 665 9.3E-65 T 19-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 ALIDE2_RS09880 c7dcd83d2f0b723db5ae11e3a5209a84 674 ProSitePatterns PS00885 EPSP synthase signature 2. 357 375 - T 19-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS09880 c7dcd83d2f0b723db5ae11e3a5209a84 674 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 13 450 33.103 T 19-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS09880 c7dcd83d2f0b723db5ae11e3a5209a84 674 Pfam PF02224 Cytidylate kinase 458 666 9.8E-65 T 19-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 ALIDE2_RS09880 c7dcd83d2f0b723db5ae11e3a5209a84 674 Hamap MF_00238 Cytidylate kinase [cmk]. 456 672 31.683 T 19-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 ALIDE2_RS09880 c7dcd83d2f0b723db5ae11e3a5209a84 674 PANTHER PTHR21090 9 638 8.2E-161 T 19-04-2016 ALIDE2_RS09880 c7dcd83d2f0b723db5ae11e3a5209a84 674 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 17 444 3.8E-122 T 19-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 ALIDE2_RS09880 c7dcd83d2f0b723db5ae11e3a5209a84 674 ProSitePatterns PS00104 EPSP synthase signature 1. 94 108 - T 19-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 ALIDE2_RS09880 c7dcd83d2f0b723db5ae11e3a5209a84 674 Gene3D G3DSA:3.40.50.300 456 669 3.1E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21620 5c8b0a9bcac3cb3cc9b9577b5183398c 121 Gene3D G3DSA:3.30.420.100 25 121 4.1E-33 T 19-04-2016 ALIDE2_RS21620 5c8b0a9bcac3cb3cc9b9577b5183398c 121 PANTHER PTHR12899 1 121 3.4E-31 T 19-04-2016 ALIDE2_RS21620 5c8b0a9bcac3cb3cc9b9577b5183398c 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 121 1.8E-34 T 19-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21620 5c8b0a9bcac3cb3cc9b9577b5183398c 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 121 24.594 T 19-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21620 5c8b0a9bcac3cb3cc9b9577b5183398c 121 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 121 3.1E-32 T 19-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21620 5c8b0a9bcac3cb3cc9b9577b5183398c 121 SUPERFAMILY SSF53137 4 119 4.8E-46 T 19-04-2016 ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 PANTHER PTHR11709:SF2 246 557 1.1E-97 T 19-04-2016 ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 PANTHER PTHR11709:SF2 88 205 1.1E-97 T 19-04-2016 ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 SUPERFAMILY SSF49503 432 558 2.72E-29 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 Pfam PF07732 Multicopper oxidase 76 183 1.0E-28 T 19-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 Gene3D G3DSA:2.60.40.420 425 558 4.8E-33 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 SUPERFAMILY SSF49503 259 346 1.85E-26 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 SUPERFAMILY SSF49503 187 216 1.85E-26 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 ProSitePatterns PS00080 Multicopper oxidases signature 2. 540 551 - T 19-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 32 6.9E-5 T 19-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 Gene3D G3DSA:2.60.40.420 44 186 1.7E-33 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 Pfam PF07731 Multicopper oxidase 427 557 2.9E-22 T 19-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 Gene3D G3DSA:2.60.40.420 249 352 4.4E-38 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 Gene3D G3DSA:2.60.40.420 187 215 4.4E-38 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 PANTHER PTHR11709 246 557 1.1E-97 T 19-04-2016 ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 PANTHER PTHR11709 88 205 1.1E-97 T 19-04-2016 ALIDE2_RS10870 3fc63bc5686c1015079725d5cfb09a13 559 SUPERFAMILY SSF49503 79 184 3.51E-32 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS13445 59cbc705ec804c648799272a2cceff97 276 SUPERFAMILY SSF53098 99 261 6.58E-40 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS13445 59cbc705ec804c648799272a2cceff97 276 PANTHER PTHR32552 1 259 8.0E-132 T 19-04-2016 ALIDE2_RS13445 59cbc705ec804c648799272a2cceff97 276 Gene3D G3DSA:3.30.420.10 100 254 7.5E-44 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS13445 59cbc705ec804c648799272a2cceff97 276 Pfam PF13683 Integrase core domain 188 253 1.2E-29 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS13445 59cbc705ec804c648799272a2cceff97 276 Pfam PF13276 HTH-like domain 33 86 2.6E-10 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS13445 59cbc705ec804c648799272a2cceff97 276 PANTHER PTHR32552:SF35 1 259 8.0E-132 T 19-04-2016 ALIDE2_RS10490 89c2d3973c8068b6c3e311a878ef2456 486 SMART SM00530 9 64 3.3E-14 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS10490 89c2d3973c8068b6c3e311a878ef2456 486 Pfam PF01381 Helix-turn-helix 10 62 6.8E-13 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS10490 89c2d3973c8068b6c3e311a878ef2456 486 PANTHER PTHR10245:SF49 6 71 7.2E-12 T 19-04-2016 ALIDE2_RS10490 89c2d3973c8068b6c3e311a878ef2456 486 PANTHER PTHR10245 6 71 7.2E-12 T 19-04-2016 ALIDE2_RS10490 89c2d3973c8068b6c3e311a878ef2456 486 Gene3D G3DSA:1.10.260.40 3 72 6.6E-20 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS10490 89c2d3973c8068b6c3e311a878ef2456 486 PIRSF PIRSF019251 1 486 7.7E-208 T 19-04-2016 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 ALIDE2_RS10490 89c2d3973c8068b6c3e311a878ef2456 486 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 327 483 1.0E-72 T 19-04-2016 IPR018653 Domain of unknown function DUF2083,transcriptional regulator ALIDE2_RS10490 89c2d3973c8068b6c3e311a878ef2456 486 Pfam PF06114 Domain of unknown function (DUF955) 222 326 1.0E-16 T 19-04-2016 IPR010359 HTH domain, IrrE-type ALIDE2_RS10490 89c2d3973c8068b6c3e311a878ef2456 486 SUPERFAMILY SSF47413 3 69 1.39E-15 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS07020 c6f35a35957bb313da99604ca9c1471c 374 PANTHER PTHR30544 4 371 1.1E-164 T 19-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS07020 c6f35a35957bb313da99604ca9c1471c 374 SUPERFAMILY SSF102114 100 330 5.76E-12 T 19-04-2016 ALIDE2_RS07020 c6f35a35957bb313da99604ca9c1471c 374 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 2 357 1.4E-129 T 19-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS07020 c6f35a35957bb313da99604ca9c1471c 374 Gene3D G3DSA:3.80.30.20 103 286 6.4E-5 T 19-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe ALIDE2_RS07020 c6f35a35957bb313da99604ca9c1471c 374 PANTHER PTHR30544:SF5 4 371 1.1E-164 T 19-04-2016 ALIDE2_RS07020 c6f35a35957bb313da99604ca9c1471c 374 PIRSF PIRSF006004 1 367 2.0E-145 T 19-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS07020 c6f35a35957bb313da99604ca9c1471c 374 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 2 354 74.399 T 19-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ALIDE2_RS07020 c6f35a35957bb313da99604ca9c1471c 374 Pfam PF04055 Radical SAM superfamily 106 279 1.1E-17 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ALIDE2_RS05720 2b28479442ec2d0f6044902691a1aacb 250 SUPERFAMILY SSF51735 5 248 1.88E-81 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS05720 2b28479442ec2d0f6044902691a1aacb 250 PANTHER PTHR24322 11 140 6.6E-45 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05720 2b28479442ec2d0f6044902691a1aacb 250 PANTHER PTHR24322 156 192 6.6E-45 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05720 2b28479442ec2d0f6044902691a1aacb 250 Gene3D G3DSA:3.40.50.720 1 248 1.0E-84 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS05720 2b28479442ec2d0f6044902691a1aacb 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.2E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05720 2b28479442ec2d0f6044902691a1aacb 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.2E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05720 2b28479442ec2d0f6044902691a1aacb 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.2E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05720 2b28479442ec2d0f6044902691a1aacb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.8E-44 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05720 2b28479442ec2d0f6044902691a1aacb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.8E-44 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05720 2b28479442ec2d0f6044902691a1aacb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.8E-44 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05720 2b28479442ec2d0f6044902691a1aacb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.8E-44 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05720 2b28479442ec2d0f6044902691a1aacb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.8E-44 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05720 2b28479442ec2d0f6044902691a1aacb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.8E-44 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS05720 2b28479442ec2d0f6044902691a1aacb 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 247 1.1E-61 T 19-04-2016 ALIDE2_RS05720 2b28479442ec2d0f6044902691a1aacb 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS19745 d4f5ed8699f1366facd6bfc1181d142c 827 TIGRFAM TIGR02243 TIGR02243: putative baseplate assembly protein 508 778 4.5E-53 T 19-04-2016 IPR011749 Conserved hypothetical protein CHP02243 ALIDE2_RS19745 d4f5ed8699f1366facd6bfc1181d142c 827 Pfam PF04865 Baseplate J-like protein 579 731 8.1E-6 T 19-04-2016 IPR006949 Baseplate protein J-like ALIDE2_RS16735 47dc16426881f7e72777c04a0abb53e2 152 PRINTS PR01469 Bacterial carbamate kinase signature 77 92 1.4E-14 T 19-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 ALIDE2_RS16735 47dc16426881f7e72777c04a0abb53e2 152 PRINTS PR01469 Bacterial carbamate kinase signature 22 41 1.4E-14 T 19-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 ALIDE2_RS16735 47dc16426881f7e72777c04a0abb53e2 152 PRINTS PR01469 Bacterial carbamate kinase signature 45 63 1.4E-14 T 19-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 ALIDE2_RS16735 47dc16426881f7e72777c04a0abb53e2 152 Pfam PF00696 Amino acid kinase family 25 107 4.2E-10 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS16735 47dc16426881f7e72777c04a0abb53e2 152 PANTHER PTHR30409:SF1 25 112 1.4E-31 T 19-04-2016 ALIDE2_RS16735 47dc16426881f7e72777c04a0abb53e2 152 PANTHER PTHR30409 25 112 1.4E-31 T 19-04-2016 ALIDE2_RS16735 47dc16426881f7e72777c04a0abb53e2 152 SUPERFAMILY SSF53633 25 113 1.44E-19 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS16735 47dc16426881f7e72777c04a0abb53e2 152 Gene3D G3DSA:3.40.1160.10 24 117 1.7E-24 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS20665 e8c0a1fe3cf3d82c768e92d4c04fa62a 225 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 4 223 5.0E-21 T 19-04-2016 IPR010843 Uncharacterised protein family AroM ALIDE2_RS20665 e8c0a1fe3cf3d82c768e92d4c04fa62a 225 Pfam PF07302 AroM protein 5 224 1.2E-60 T 19-04-2016 IPR010843 Uncharacterised protein family AroM ALIDE2_RS10635 de88b0373069b71e5c1008d93596537c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.6E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10635 de88b0373069b71e5c1008d93596537c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.6E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10635 de88b0373069b71e5c1008d93596537c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.6E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10635 de88b0373069b71e5c1008d93596537c 253 PANTHER PTHR24322 158 189 3.9E-46 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10635 de88b0373069b71e5c1008d93596537c 253 PANTHER PTHR24322 12 142 3.9E-46 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10635 de88b0373069b71e5c1008d93596537c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.1E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10635 de88b0373069b71e5c1008d93596537c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.1E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10635 de88b0373069b71e5c1008d93596537c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.1E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10635 de88b0373069b71e5c1008d93596537c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.1E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10635 de88b0373069b71e5c1008d93596537c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.1E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10635 de88b0373069b71e5c1008d93596537c 253 Gene3D G3DSA:3.40.50.720 7 232 2.7E-62 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS10635 de88b0373069b71e5c1008d93596537c 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS10635 de88b0373069b71e5c1008d93596537c 253 Pfam PF00106 short chain dehydrogenase 8 201 3.5E-49 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10635 de88b0373069b71e5c1008d93596537c 253 SUPERFAMILY SSF51735 1 233 6.91E-59 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS02425 ab096c827e5c928bd333965c255a407d 459 SUPERFAMILY SSF103378 21 450 1.83E-90 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS02425 ab096c827e5c928bd333965c255a407d 459 PANTHER PTHR16943 21 449 6.1E-79 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS02425 ab096c827e5c928bd333965c255a407d 459 PANTHER PTHR16943:SF8 21 449 6.1E-79 T 19-04-2016 ALIDE2_RS02425 ab096c827e5c928bd333965c255a407d 459 Gene3D G3DSA:3.30.1330.120 277 396 2.7E-13 T 19-04-2016 ALIDE2_RS02425 ab096c827e5c928bd333965c255a407d 459 Pfam PF03972 MmgE/PrpD family 24 442 1.4E-87 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS03745 736f7dfd071f56fe19dafaa1298ccc51 325 PIRSF PIRSF002786 2 317 4.7E-55 T 19-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 ALIDE2_RS03745 736f7dfd071f56fe19dafaa1298ccc51 325 Pfam PF03934 Type II secretion system (T2SS), protein K 32 306 1.0E-59 T 19-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 ALIDE2_RS03745 736f7dfd071f56fe19dafaa1298ccc51 325 SUPERFAMILY SSF158544 127 214 9.94E-5 T 19-04-2016 ALIDE2_RS03745 736f7dfd071f56fe19dafaa1298ccc51 325 SUPERFAMILY SSF54523 48 109 5.65E-5 T 19-04-2016 ALIDE2_RS03745 736f7dfd071f56fe19dafaa1298ccc51 325 SUPERFAMILY SSF54523 275 314 5.65E-5 T 19-04-2016 ALIDE2_RS18195 3d38ad4e24deb23196749db0248e6b82 92 SUPERFAMILY SSF54909 1 91 8.85E-36 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel ALIDE2_RS18195 3d38ad4e24deb23196749db0248e6b82 92 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 4.2E-42 T 19-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 ALIDE2_RS18195 3d38ad4e24deb23196749db0248e6b82 92 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 6.0E-15 T 19-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 ALIDE2_RS18195 3d38ad4e24deb23196749db0248e6b82 92 PIRSF PIRSF001486 1 92 7.7E-42 T 19-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 ALIDE2_RS18195 3d38ad4e24deb23196749db0248e6b82 92 Pfam PF02426 Muconolactone delta-isomerase 1 90 1.3E-38 T 19-04-2016 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 ALIDE2_RS07385 b5ba3031f5da2e1c146c851fca7f08f8 256 SUPERFAMILY SSF52096 1 247 5.41E-65 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS07385 b5ba3031f5da2e1c146c851fca7f08f8 256 PANTHER PTHR11941 1 255 3.1E-64 T 19-04-2016 ALIDE2_RS07385 b5ba3031f5da2e1c146c851fca7f08f8 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 255 2.3E-45 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS07385 b5ba3031f5da2e1c146c851fca7f08f8 256 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS07385 b5ba3031f5da2e1c146c851fca7f08f8 256 Gene3D G3DSA:3.90.226.10 3 255 4.3E-66 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS14050 307140ed6aba1fdf7ed395f0766c5d17 67 PANTHER PTHR33343 1 63 4.9E-21 T 19-04-2016 ALIDE2_RS14050 307140ed6aba1fdf7ed395f0766c5d17 67 Pfam PF01632 Ribosomal protein L35 2 62 2.1E-23 T 19-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS14050 307140ed6aba1fdf7ed395f0766c5d17 67 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 9.1E-24 T 19-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS14050 307140ed6aba1fdf7ed395f0766c5d17 67 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 19-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS14050 307140ed6aba1fdf7ed395f0766c5d17 67 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.0E-15 T 19-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS14050 307140ed6aba1fdf7ed395f0766c5d17 67 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.0E-15 T 19-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS14050 307140ed6aba1fdf7ed395f0766c5d17 67 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.0E-15 T 19-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS14050 307140ed6aba1fdf7ed395f0766c5d17 67 SUPERFAMILY SSF143034 2 64 1.31E-22 T 19-04-2016 ALIDE2_RS14050 307140ed6aba1fdf7ed395f0766c5d17 67 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.414 T 19-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS16915 5af90270b2d3de1143739bc85fdf13f4 502 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 465 44.641 T 19-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 ALIDE2_RS16915 5af90270b2d3de1143739bc85fdf13f4 502 Gene3D G3DSA:3.40.50.2020 270 442 3.7E-45 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS16915 5af90270b2d3de1143739bc85fdf13f4 502 SUPERFAMILY SSF56235 2 256 1.63E-66 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS16915 5af90270b2d3de1143739bc85fdf13f4 502 SUPERFAMILY SSF53271 249 475 1.23E-70 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS16915 5af90270b2d3de1143739bc85fdf13f4 502 Pfam PF13537 Glutamine amidotransferase domain 82 212 3.4E-19 T 19-04-2016 IPR017932 Glutamine amidotransferase type 2 domain ALIDE2_RS16915 5af90270b2d3de1143739bc85fdf13f4 502 Pfam PF00156 Phosphoribosyl transferase domain 277 392 9.9E-9 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 ALIDE2_RS16915 5af90270b2d3de1143739bc85fdf13f4 502 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 1.0E-157 T 19-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 ALIDE2_RS16915 5af90270b2d3de1143739bc85fdf13f4 502 PANTHER PTHR11907:SF0 1 477 4.4E-236 T 19-04-2016 ALIDE2_RS16915 5af90270b2d3de1143739bc85fdf13f4 502 Gene3D G3DSA:3.60.20.10 2 256 2.6E-60 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS16915 5af90270b2d3de1143739bc85fdf13f4 502 PANTHER PTHR11907 1 477 4.4E-236 T 19-04-2016 ALIDE2_RS16915 5af90270b2d3de1143739bc85fdf13f4 502 PIRSF PIRSF000485 1 479 4.1E-156 T 19-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 ALIDE2_RS14490 5cd5bfa6330c74a7978f22c249439bbc 307 SUPERFAMILY SSF103481 200 295 1.57E-13 T 19-04-2016 ALIDE2_RS14490 5cd5bfa6330c74a7978f22c249439bbc 307 PANTHER PTHR12715 19 307 3.1E-73 T 19-04-2016 ALIDE2_RS14490 5cd5bfa6330c74a7978f22c249439bbc 307 PANTHER PTHR12715:SF17 19 307 3.1E-73 T 19-04-2016 ALIDE2_RS14490 5cd5bfa6330c74a7978f22c249439bbc 307 Pfam PF00892 EamA-like transporter family 21 147 3.3E-21 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS14490 5cd5bfa6330c74a7978f22c249439bbc 307 Pfam PF00892 EamA-like transporter family 163 295 3.8E-17 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS14490 5cd5bfa6330c74a7978f22c249439bbc 307 SUPERFAMILY SSF103481 49 150 1.23E-18 T 19-04-2016 ALIDE2_RS00220 41075d27eca67ee18949e9fabd816874 65 Gene3D G3DSA:3.30.70.100 2 63 7.5E-19 T 19-04-2016 ALIDE2_RS00220 41075d27eca67ee18949e9fabd816874 65 SUPERFAMILY SSF55008 1 63 2.49E-15 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS00220 41075d27eca67ee18949e9fabd816874 65 Pfam PF00403 Heavy-metal-associated domain 4 62 2.7E-12 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS02315 161bd403445efc537f49eef536aa9218 431 Gene3D G3DSA:1.20.1250.20 211 412 1.8E-22 T 19-04-2016 ALIDE2_RS02315 161bd403445efc537f49eef536aa9218 431 Gene3D G3DSA:1.20.1250.20 17 198 1.2E-23 T 19-04-2016 ALIDE2_RS02315 161bd403445efc537f49eef536aa9218 431 SUPERFAMILY SSF103473 7 410 4.71E-62 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS02315 161bd403445efc537f49eef536aa9218 431 PANTHER PTHR23515 16 295 1.3E-72 T 19-04-2016 ALIDE2_RS02315 161bd403445efc537f49eef536aa9218 431 PANTHER PTHR23515 314 418 1.3E-72 T 19-04-2016 ALIDE2_RS02315 161bd403445efc537f49eef536aa9218 431 Pfam PF07690 Major Facilitator Superfamily 27 305 6.5E-30 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS06135 245a06e9c443edd5df59e566fadf4b32 331 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 1.8E-13 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 ALIDE2_RS06135 245a06e9c443edd5df59e566fadf4b32 331 PRINTS PR00139 Asparaginase/glutaminase family signature 9 20 1.8E-13 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 ALIDE2_RS06135 245a06e9c443edd5df59e566fadf4b32 331 PRINTS PR00139 Asparaginase/glutaminase family signature 86 104 1.8E-13 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 ALIDE2_RS06135 245a06e9c443edd5df59e566fadf4b32 331 SMART SM00870 8 325 4.4E-102 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 ALIDE2_RS06135 245a06e9c443edd5df59e566fadf4b32 331 Gene3D G3DSA:3.40.50.40 214 329 3.4E-26 T 19-04-2016 IPR027473 L-asparaginase, C-terminal domain ALIDE2_RS06135 245a06e9c443edd5df59e566fadf4b32 331 PANTHER PTHR11707 12 318 3.1E-42 T 19-04-2016 ALIDE2_RS06135 245a06e9c443edd5df59e566fadf4b32 331 PANTHER PTHR11707:SF29 12 318 3.1E-42 T 19-04-2016 ALIDE2_RS06135 245a06e9c443edd5df59e566fadf4b32 331 SUPERFAMILY SSF53774 8 330 1.7E-84 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 ALIDE2_RS06135 245a06e9c443edd5df59e566fadf4b32 331 Gene3D G3DSA:3.40.50.1170 8 203 2.0E-52 T 19-04-2016 IPR027474 L-asparaginase, N-terminal ALIDE2_RS06135 245a06e9c443edd5df59e566fadf4b32 331 PIRSF PIRSF500176 6 331 2.6E-75 T 19-04-2016 ALIDE2_RS06135 245a06e9c443edd5df59e566fadf4b32 331 Pfam PF00710 Asparaginase, N-terminal 10 199 9.5E-48 T 19-04-2016 IPR027474 L-asparaginase, N-terminal ALIDE2_RS06135 245a06e9c443edd5df59e566fadf4b32 331 PIRSF PIRSF001220 3 330 2.4E-79 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 ALIDE2_RS13455 c4c9d6a4885340a23d3c126a8ffeaab4 206 Gene3D G3DSA:3.40.50.150 4 190 6.2E-25 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS13455 c4c9d6a4885340a23d3c126a8ffeaab4 206 SUPERFAMILY SSF53335 5 167 6.03E-24 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS13455 c4c9d6a4885340a23d3c126a8ffeaab4 206 Pfam PF13649 Methyltransferase domain 44 140 2.2E-13 T 19-04-2016 ALIDE2_RS12025 d98174aaeed59cbba3436381ec016bff 677 Gene3D G3DSA:1.20.1050.40 12 134 1.6E-16 T 19-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal ALIDE2_RS12025 d98174aaeed59cbba3436381ec016bff 677 SUPERFAMILY SSF55486 1 674 2.69E-181 T 19-04-2016 ALIDE2_RS12025 d98174aaeed59cbba3436381ec016bff 677 Gene3D G3DSA:1.10.1370.10 136 345 1.1E-136 T 19-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 ALIDE2_RS12025 d98174aaeed59cbba3436381ec016bff 677 Gene3D G3DSA:1.10.1370.10 500 675 1.1E-136 T 19-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 ALIDE2_RS12025 d98174aaeed59cbba3436381ec016bff 677 Pfam PF01432 Peptidase family M3 218 674 4.6E-134 T 19-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 ALIDE2_RS12025 d98174aaeed59cbba3436381ec016bff 677 PANTHER PTHR11804 2 675 3.0E-261 T 19-04-2016 ALIDE2_RS12025 d98174aaeed59cbba3436381ec016bff 677 PANTHER PTHR11804:SF8 2 675 3.0E-261 T 19-04-2016 ALIDE2_RS12025 d98174aaeed59cbba3436381ec016bff 677 Gene3D G3DSA:3.40.390.10 355 499 2.7E-50 T 19-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 ALIDE2_RS03510 700c21a9f5880c8dccdb4484086f6fb9 337 Pfam PF01522 Polysaccharide deacetylase 91 281 6.2E-14 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ALIDE2_RS03510 700c21a9f5880c8dccdb4484086f6fb9 337 PANTHER PTHR34216 204 311 1.5E-26 T 19-04-2016 ALIDE2_RS03510 700c21a9f5880c8dccdb4484086f6fb9 337 PANTHER PTHR34216 26 148 1.5E-26 T 19-04-2016 ALIDE2_RS03510 700c21a9f5880c8dccdb4484086f6fb9 337 SUPERFAMILY SSF88713 57 134 2.04E-21 T 19-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ALIDE2_RS03510 700c21a9f5880c8dccdb4484086f6fb9 337 SUPERFAMILY SSF88713 209 288 2.04E-21 T 19-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ALIDE2_RS03510 700c21a9f5880c8dccdb4484086f6fb9 337 Gene3D G3DSA:3.20.20.370 73 134 3.5E-16 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ALIDE2_RS03510 700c21a9f5880c8dccdb4484086f6fb9 337 Gene3D G3DSA:3.20.20.370 209 286 3.5E-16 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ALIDE2_RS11635 5426f7fcbded254efc75d6d1cfea56b9 475 Gene3D G3DSA:3.40.640.10 146 349 7.0E-67 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS11635 5426f7fcbded254efc75d6d1cfea56b9 475 Gene3D G3DSA:1.10.10.10 2 67 1.6E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11635 5426f7fcbded254efc75d6d1cfea56b9 475 SUPERFAMILY SSF53383 94 466 1.95E-89 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS11635 5426f7fcbded254efc75d6d1cfea56b9 475 Gene3D G3DSA:3.90.1150.10 350 465 1.3E-5 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS11635 5426f7fcbded254efc75d6d1cfea56b9 475 PANTHER PTHR11751:SF314 85 464 3.5E-152 T 19-04-2016 ALIDE2_RS11635 5426f7fcbded254efc75d6d1cfea56b9 475 SUPERFAMILY SSF46785 2 76 1.03E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11635 5426f7fcbded254efc75d6d1cfea56b9 475 Pfam PF00155 Aminotransferase class I and II 147 459 1.3E-21 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ALIDE2_RS11635 5426f7fcbded254efc75d6d1cfea56b9 475 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 5.2E-13 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS11635 5426f7fcbded254efc75d6d1cfea56b9 475 SMART SM00345 7 66 2.0E-14 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS11635 5426f7fcbded254efc75d6d1cfea56b9 475 PANTHER PTHR11751 85 464 3.5E-152 T 19-04-2016 ALIDE2_RS02060 204b7f6d0b262ac9bd0029ab39d6ba4b 188 Pfam PF04011 LemA family 152 184 1.5E-6 T 19-04-2016 IPR007156 LemA ALIDE2_RS02060 204b7f6d0b262ac9bd0029ab39d6ba4b 188 Gene3D G3DSA:1.20.1440.20 10 184 1.3E-45 T 19-04-2016 IPR023353 LemA-like domain ALIDE2_RS02060 204b7f6d0b262ac9bd0029ab39d6ba4b 188 SUPERFAMILY SSF140478 89 184 5.49E-10 T 19-04-2016 IPR023353 LemA-like domain ALIDE2_RS05045 b05f19327a7ec4ab557fc2b4b6556b35 294 PIRSF PIRSF000388 19 293 9.2E-97 T 19-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 ALIDE2_RS05045 b05f19327a7ec4ab557fc2b4b6556b35 294 Pfam PF02548 Ketopantoate hydroxymethyltransferase 28 287 2.5E-105 T 19-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 ALIDE2_RS05045 b05f19327a7ec4ab557fc2b4b6556b35 294 SUPERFAMILY SSF51621 28 289 9.81E-97 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS05045 b05f19327a7ec4ab557fc2b4b6556b35 294 PANTHER PTHR20881 18 289 7.6E-128 T 19-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 ALIDE2_RS05045 b05f19327a7ec4ab557fc2b4b6556b35 294 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 27 293 40.594 T 19-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 ALIDE2_RS05045 b05f19327a7ec4ab557fc2b4b6556b35 294 Gene3D G3DSA:3.20.20.60 25 289 5.2E-106 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS05045 b05f19327a7ec4ab557fc2b4b6556b35 294 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 32 289 3.5E-93 T 19-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 ALIDE2_RS01555 770038522f28aa17387c004026c4dfc8 346 SUPERFAMILY SSF56112 7 326 1.83E-63 T 19-04-2016 IPR011009 Protein kinase-like domain ALIDE2_RS01555 770038522f28aa17387c004026c4dfc8 346 PANTHER PTHR21310:SF14 30 247 1.8E-23 T 19-04-2016 ALIDE2_RS01555 770038522f28aa17387c004026c4dfc8 346 PANTHER PTHR21310 30 247 1.8E-23 T 19-04-2016 ALIDE2_RS01555 770038522f28aa17387c004026c4dfc8 346 Pfam PF01636 Phosphotransferase enzyme family 30 251 5.1E-57 T 19-04-2016 IPR002575 Aminoglycoside phosphotransferase ALIDE2_RS01555 770038522f28aa17387c004026c4dfc8 346 Gene3D G3DSA:3.90.1200.10 110 309 1.1E-34 T 19-04-2016 ALIDE2_RS01555 770038522f28aa17387c004026c4dfc8 346 Gene3D G3DSA:3.30.200.20 27 98 1.1E-4 T 19-04-2016 ALIDE2_RS00565 bd1c5d434e2c14280f2fc3bf49bb385a 321 PIRSF PIRSF017082 1 320 3.3E-72 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00565 bd1c5d434e2c14280f2fc3bf49bb385a 321 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 317 6.2E-71 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00565 bd1c5d434e2c14280f2fc3bf49bb385a 321 PANTHER PTHR30349 1 285 2.5E-73 T 19-04-2016 ALIDE2_RS00565 bd1c5d434e2c14280f2fc3bf49bb385a 321 SUPERFAMILY SSF53850 113 282 6.35E-12 T 19-04-2016 ALIDE2_RS00565 bd1c5d434e2c14280f2fc3bf49bb385a 321 PANTHER PTHR30349:SF16 1 285 2.5E-73 T 19-04-2016 ALIDE2_RS11945 839e4bb17f7c4a34e0ed34d71314eb72 406 PANTHER PTHR11601:SF34 8 406 1.9E-228 T 19-04-2016 ALIDE2_RS11945 839e4bb17f7c4a34e0ed34d71314eb72 406 Gene3D G3DSA:3.40.640.10 22 255 2.5E-95 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS11945 839e4bb17f7c4a34e0ed34d71314eb72 406 PIRSF PIRSF005572 6 386 3.0E-127 T 19-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 ALIDE2_RS11945 839e4bb17f7c4a34e0ed34d71314eb72 406 Gene3D G3DSA:3.90.1150.10 256 376 6.8E-48 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS11945 839e4bb17f7c4a34e0ed34d71314eb72 406 PANTHER PTHR11601 8 406 1.9E-228 T 19-04-2016 ALIDE2_RS11945 839e4bb17f7c4a34e0ed34d71314eb72 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 199 218 - T 19-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ALIDE2_RS11945 839e4bb17f7c4a34e0ed34d71314eb72 406 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 7 406 2.7E-220 T 19-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 ALIDE2_RS11945 839e4bb17f7c4a34e0ed34d71314eb72 406 Pfam PF00266 Aminotransferase class-V 9 370 9.5E-83 T 19-04-2016 IPR000192 Aminotransferase class V domain ALIDE2_RS11945 839e4bb17f7c4a34e0ed34d71314eb72 406 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 5 397 52.726 T 19-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 ALIDE2_RS11945 839e4bb17f7c4a34e0ed34d71314eb72 406 SUPERFAMILY SSF53383 8 393 1.12E-110 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS24115 c2afb2962e479319c5f40bf7d32472a8 291 Gene3D G3DSA:3.30.1540.10 80 171 1.0E-18 T 19-04-2016 ALIDE2_RS24115 c2afb2962e479319c5f40bf7d32472a8 291 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 157 287 3.0E-27 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS24115 c2afb2962e479319c5f40bf7d32472a8 291 PANTHER PTHR30349:SF1 164 256 4.9E-19 T 19-04-2016 ALIDE2_RS24115 c2afb2962e479319c5f40bf7d32472a8 291 Pfam PF02515 CoA-transferase family III 1 175 2.9E-26 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS24115 c2afb2962e479319c5f40bf7d32472a8 291 Gene3D G3DSA:3.40.50.10540 207 269 1.7E-14 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS24115 c2afb2962e479319c5f40bf7d32472a8 291 Gene3D G3DSA:3.40.50.10540 1 72 1.7E-14 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS24115 c2afb2962e479319c5f40bf7d32472a8 291 SUPERFAMILY SSF89796 1 175 1.44E-32 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS24115 c2afb2962e479319c5f40bf7d32472a8 291 PANTHER PTHR30349 164 256 4.9E-19 T 19-04-2016 ALIDE2_RS00375 f7b7ca8d31d46b48cdef6debf15d9064 336 SUPERFAMILY SSF53850 131 297 1.01E-17 T 19-04-2016 ALIDE2_RS00375 f7b7ca8d31d46b48cdef6debf15d9064 336 PANTHER PTHR30349:SF16 40 330 4.4E-92 T 19-04-2016 ALIDE2_RS00375 f7b7ca8d31d46b48cdef6debf15d9064 336 PANTHER PTHR30349 40 330 4.4E-92 T 19-04-2016 ALIDE2_RS00375 f7b7ca8d31d46b48cdef6debf15d9064 336 Gene3D G3DSA:3.40.190.10 141 254 4.6E-6 T 19-04-2016 ALIDE2_RS00375 f7b7ca8d31d46b48cdef6debf15d9064 336 PIRSF PIRSF017082 4 334 2.7E-91 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00375 f7b7ca8d31d46b48cdef6debf15d9064 336 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 61 330 1.0E-88 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00525 dfea1386e009689b6e29649716ad2113 622 PANTHER PTHR11561 11 622 0.0 T 19-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 ALIDE2_RS00525 dfea1386e009689b6e29649716ad2113 622 Pfam PF00821 Phosphoenolpyruvate carboxykinase 25 620 2.1E-277 T 19-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 ALIDE2_RS00525 dfea1386e009689b6e29649716ad2113 622 SUPERFAMILY SSF53795 250 620 5.04E-150 T 19-04-2016 ALIDE2_RS00525 dfea1386e009689b6e29649716ad2113 622 Gene3D G3DSA:3.40.449.10 11 249 2.0E-103 T 19-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 ALIDE2_RS00525 dfea1386e009689b6e29649716ad2113 622 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 13 621 49.613 T 19-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 ALIDE2_RS00525 dfea1386e009689b6e29649716ad2113 622 PIRSF PIRSF001348 3 622 3.6E-278 T 19-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 ALIDE2_RS00525 dfea1386e009689b6e29649716ad2113 622 SUPERFAMILY SSF68923 12 249 9.42E-105 T 19-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 ALIDE2_RS00525 dfea1386e009689b6e29649716ad2113 622 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 274 282 - T 19-04-2016 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 ALIDE2_RS00525 dfea1386e009689b6e29649716ad2113 622 Gene3D G3DSA:3.90.228.20 250 321 2.1E-30 T 19-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 ALIDE2_RS00525 dfea1386e009689b6e29649716ad2113 622 Gene3D G3DSA:3.90.228.20 343 620 7.6E-94 T 19-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 ALIDE2_RS10790 ed00821876295385f729e03795ecf5e3 115 Pfam PF02411 MerT mercuric transport protein 4 114 6.0E-32 T 19-04-2016 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 ALIDE2_RS07075 5d01704598e9b8180b711f82ce46ea0b 304 PIRSF PIRSF005651 1 295 9.3E-82 T 19-04-2016 IPR010200 HflC GO:0016021|GO:0052547 ALIDE2_RS07075 5d01704598e9b8180b711f82ce46ea0b 304 SUPERFAMILY SSF117892 54 194 2.48E-23 T 19-04-2016 IPR001107 Band 7 domain ALIDE2_RS07075 5d01704598e9b8180b711f82ce46ea0b 304 PANTHER PTHR10264:SF80 4 286 2.0E-61 T 19-04-2016 ALIDE2_RS07075 5d01704598e9b8180b711f82ce46ea0b 304 SMART SM00244 20 188 7.5E-16 T 19-04-2016 IPR001107 Band 7 domain ALIDE2_RS07075 5d01704598e9b8180b711f82ce46ea0b 304 Pfam PF01145 SPFH domain / Band 7 family 24 202 5.2E-30 T 19-04-2016 IPR001107 Band 7 domain ALIDE2_RS07075 5d01704598e9b8180b711f82ce46ea0b 304 PANTHER PTHR10264 4 286 2.0E-61 T 19-04-2016 IPR001972 Stomatin family GO:0016020 ALIDE2_RS07075 5d01704598e9b8180b711f82ce46ea0b 304 TIGRFAM TIGR01932 hflC: HflC protein 160 286 3.7E-40 T 19-04-2016 IPR010200 HflC GO:0016021|GO:0052547 ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 Gene3D G3DSA:3.40.50.720 4 247 1.9E-90 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 PANTHER PTHR24319 1 247 4.4E-54 T 19-04-2016 ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 PANTHER PTHR24319:SF23 1 247 4.4E-54 T 19-04-2016 ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.6E-10 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.6E-10 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.6E-10 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 1.0E-65 T 19-04-2016 ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.6E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.6E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.6E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.6E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.6E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.6E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 SUPERFAMILY SSF51735 7 247 1.45E-84 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 190 1.9E-4 T 19-04-2016 ALIDE2_RS07570 e3295b1e064aae967057a99321837b95 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS20795 602905d997a9cac916d50f20501f5eda 254 PANTHER PTHR30065 1 254 1.2E-62 T 19-04-2016 ALIDE2_RS20795 602905d997a9cac916d50f20501f5eda 254 PANTHER PTHR30065:SF1 1 254 1.2E-62 T 19-04-2016 ALIDE2_RS20795 602905d997a9cac916d50f20501f5eda 254 Pfam PF01311 Bacterial export proteins, family 1 16 247 1.2E-66 T 19-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ALIDE2_RS20795 602905d997a9cac916d50f20501f5eda 254 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 16 253 3.1E-61 T 19-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 ALIDE2_RS20795 602905d997a9cac916d50f20501f5eda 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.8E-29 T 19-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ALIDE2_RS20795 602905d997a9cac916d50f20501f5eda 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 1.8E-29 T 19-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ALIDE2_RS20795 602905d997a9cac916d50f20501f5eda 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.8E-29 T 19-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ALIDE2_RS20795 602905d997a9cac916d50f20501f5eda 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 1.8E-29 T 19-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 PANTHER PTHR18937:SF261 2 495 2.9E-258 T 19-04-2016 ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 PANTHER PTHR18937:SF261 512 1173 2.9E-258 T 19-04-2016 ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 SUPERFAMILY SSF75553 478 676 2.35E-6 T 19-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 PANTHER PTHR18937 2 495 2.9E-258 T 19-04-2016 ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 PANTHER PTHR18937 512 1173 2.9E-258 T 19-04-2016 ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 SMART SM00968 518 628 2.8E-4 T 19-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1165 0.0 T 19-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1158 1.5E-65 T 19-04-2016 IPR003395 RecF/RecN/SMC, N-terminal ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 Pfam PF06470 SMC proteins Flexible Hinge Domain 524 626 6.8E-7 T 19-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 SUPERFAMILY SSF52540 1051 1167 1.43E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 SUPERFAMILY SSF52540 2 213 1.43E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 PIRSF PIRSF005719 1 1174 1.2E-246 T 19-04-2016 IPR024704 Structural maintenance of chromosomes protein ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 Gene3D G3DSA:3.40.50.300 2 187 4.3E-77 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 Gene3D G3DSA:3.40.50.300 378 379 4.3E-77 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 Gene3D G3DSA:3.40.50.300 1058 1171 4.3E-77 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12180 fbd3a56c5ef016e58d737666a890fc59 1174 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1167 22.744 T 19-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 ALIDE2_RS21705 5edfac3d30afdcaf794eabce5aeedacd 367 PANTHER PTHR30307:SF0 10 365 8.6E-152 T 19-04-2016 ALIDE2_RS21705 5edfac3d30afdcaf794eabce5aeedacd 367 Pfam PF02547 Queuosine biosynthesis protein 10 358 6.4E-123 T 19-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS21705 5edfac3d30afdcaf794eabce5aeedacd 367 SUPERFAMILY SSF111337 9 358 1.18E-123 T 19-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS21705 5edfac3d30afdcaf794eabce5aeedacd 367 Gene3D G3DSA:2.40.10.240 70 146 5.9E-9 T 19-04-2016 ALIDE2_RS21705 5edfac3d30afdcaf794eabce5aeedacd 367 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 9 358 3.2E-119 T 19-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS21705 5edfac3d30afdcaf794eabce5aeedacd 367 PANTHER PTHR30307 10 365 8.6E-152 T 19-04-2016 ALIDE2_RS21705 5edfac3d30afdcaf794eabce5aeedacd 367 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 8 359 43.975 T 19-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 ALIDE2_RS21705 5edfac3d30afdcaf794eabce5aeedacd 367 Gene3D G3DSA:3.40.1780.10 200 358 8.7E-93 T 19-04-2016 ALIDE2_RS21705 5edfac3d30afdcaf794eabce5aeedacd 367 Gene3D G3DSA:3.40.1780.10 8 67 8.7E-93 T 19-04-2016 ALIDE2_RS00515 8f058c539b00c64b4d1ec87bcf264f61 323 Gene3D G3DSA:3.40.190.10 92 192 2.5E-29 T 19-04-2016 ALIDE2_RS00515 8f058c539b00c64b4d1ec87bcf264f61 323 Gene3D G3DSA:3.40.190.10 299 314 2.5E-29 T 19-04-2016 ALIDE2_RS00515 8f058c539b00c64b4d1ec87bcf264f61 323 Pfam PF03466 LysR substrate binding domain 98 312 8.5E-28 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS00515 8f058c539b00c64b4d1ec87bcf264f61 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.1E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00515 8f058c539b00c64b4d1ec87bcf264f61 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.1E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00515 8f058c539b00c64b4d1ec87bcf264f61 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.1E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00515 8f058c539b00c64b4d1ec87bcf264f61 323 Gene3D G3DSA:1.10.10.10 5 87 2.3E-32 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00515 8f058c539b00c64b4d1ec87bcf264f61 323 SUPERFAMILY SSF46785 6 86 6.35E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00515 8f058c539b00c64b4d1ec87bcf264f61 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 7.5E-20 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00515 8f058c539b00c64b4d1ec87bcf264f61 323 SUPERFAMILY SSF53850 92 309 2.44E-45 T 19-04-2016 ALIDE2_RS00515 8f058c539b00c64b4d1ec87bcf264f61 323 Gene3D G3DSA:3.40.190.10 193 283 8.4E-31 T 19-04-2016 ALIDE2_RS00515 8f058c539b00c64b4d1ec87bcf264f61 323 PANTHER PTHR30118 1 321 3.7E-94 T 19-04-2016 ALIDE2_RS00515 8f058c539b00c64b4d1ec87bcf264f61 323 PANTHER PTHR30118:SF8 1 321 3.7E-94 T 19-04-2016 ALIDE2_RS03635 bf8eb696dad4a1a8e0cfe0950306e96b 217 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 26 214 1.1E-54 T 19-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like ALIDE2_RS03635 bf8eb696dad4a1a8e0cfe0950306e96b 217 SUPERFAMILY SSF51197 22 216 1.65E-57 T 19-04-2016 ALIDE2_RS03635 bf8eb696dad4a1a8e0cfe0950306e96b 217 Gene3D G3DSA:2.60.120.590 23 216 1.2E-53 T 19-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like ALIDE2_RS03635 bf8eb696dad4a1a8e0cfe0950306e96b 217 PANTHER PTHR16557 49 214 1.2E-50 T 19-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 ALIDE2_RS04715 e44d6e02af692f61f735b1771365d0dd 319 PANTHER PTHR10210 1 319 2.2E-184 T 19-04-2016 ALIDE2_RS04715 e44d6e02af692f61f735b1771365d0dd 319 Pfam PF14572 Phosphoribosyl synthetase-associated domain 207 317 2.3E-31 T 19-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 ALIDE2_RS04715 e44d6e02af692f61f735b1771365d0dd 319 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 125 3.9E-47 T 19-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 ALIDE2_RS04715 e44d6e02af692f61f735b1771365d0dd 319 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 133 148 - T 19-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 ALIDE2_RS04715 e44d6e02af692f61f735b1771365d0dd 319 SUPERFAMILY SSF53271 73 308 2.97E-66 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS04715 e44d6e02af692f61f735b1771365d0dd 319 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 10 318 1.5E-125 T 19-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 ALIDE2_RS04715 e44d6e02af692f61f735b1771365d0dd 319 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 8 318 48.387 T 19-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 ALIDE2_RS04715 e44d6e02af692f61f735b1771365d0dd 319 Gene3D G3DSA:3.40.50.2020 4 163 1.2E-72 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS04715 e44d6e02af692f61f735b1771365d0dd 319 Gene3D G3DSA:3.40.50.2020 164 292 1.4E-56 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS04715 e44d6e02af692f61f735b1771365d0dd 319 SMART SM01400 8 125 2.5E-72 T 19-04-2016 ALIDE2_RS11690 6c354a8b3b4259cde35e3e0aca9fab8d 406 Gene3D G3DSA:3.20.20.70 26 366 4.9E-70 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS11690 6c354a8b3b4259cde35e3e0aca9fab8d 406 Pfam PF04055 Radical SAM superfamily 37 179 1.1E-20 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ALIDE2_RS11690 6c354a8b3b4259cde35e3e0aca9fab8d 406 PANTHER PTHR11228 276 385 6.4E-72 T 19-04-2016 ALIDE2_RS11690 6c354a8b3b4259cde35e3e0aca9fab8d 406 PANTHER PTHR11228 22 260 6.4E-72 T 19-04-2016 ALIDE2_RS11690 6c354a8b3b4259cde35e3e0aca9fab8d 406 SUPERFAMILY SSF102114 29 355 6.93E-67 T 19-04-2016 ALIDE2_RS11690 6c354a8b3b4259cde35e3e0aca9fab8d 406 PIRSF PIRSF037420 13 393 1.3E-129 T 19-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 ALIDE2_RS11690 6c354a8b3b4259cde35e3e0aca9fab8d 406 PANTHER PTHR11228:SF7 276 385 6.4E-72 T 19-04-2016 ALIDE2_RS11690 6c354a8b3b4259cde35e3e0aca9fab8d 406 PANTHER PTHR11228:SF7 22 260 6.4E-72 T 19-04-2016 ALIDE2_RS11690 6c354a8b3b4259cde35e3e0aca9fab8d 406 TIGRFAM TIGR04051 rSAM_NirJ: heme d1 biosynthesis radical SAM protein NirJ 30 383 8.6E-187 T 19-04-2016 IPR023992 Heme D1 biosynthesis, radical SAM protein NirJ ALIDE2_RS11690 6c354a8b3b4259cde35e3e0aca9fab8d 406 Pfam PF13353 4Fe-4S single cluster domain 34 121 2.9E-7 T 19-04-2016 ALIDE2_RS11055 1d0df954d0c369daf124defe3692f7f7 568 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 416 435 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS11055 1d0df954d0c369daf124defe3692f7f7 568 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 457 1.8E-30 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS11055 1d0df954d0c369daf124defe3692f7f7 568 SUPERFAMILY SSF47203 299 459 3.22E-36 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS11055 1d0df954d0c369daf124defe3692f7f7 568 Gene3D G3DSA:2.40.110.10 191 288 3.5E-21 T 19-04-2016 ALIDE2_RS11055 1d0df954d0c369daf124defe3692f7f7 568 Gene3D G3DSA:1.20.140.10 289 460 3.8E-36 T 19-04-2016 ALIDE2_RS11055 1d0df954d0c369daf124defe3692f7f7 568 PANTHER PTHR10909 55 477 2.2E-165 T 19-04-2016 ALIDE2_RS11055 1d0df954d0c369daf124defe3692f7f7 568 SUPERFAMILY SSF56645 107 310 3.66E-39 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS11055 1d0df954d0c369daf124defe3692f7f7 568 PANTHER PTHR10909:SF262 55 477 2.2E-165 T 19-04-2016 ALIDE2_RS11055 1d0df954d0c369daf124defe3692f7f7 568 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 192 290 1.3E-15 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS08925 38732b742126c6835ca90d8b2168670b 912 Pfam PF04851 Type III restriction enzyme, res subunit 13 238 4.1E-29 T 19-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ALIDE2_RS08925 38732b742126c6835ca90d8b2168670b 912 SUPERFAMILY SSF52540 330 430 1.51E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08925 38732b742126c6835ca90d8b2168670b 912 SUPERFAMILY SSF52540 69 104 1.51E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08925 38732b742126c6835ca90d8b2168670b 912 SUPERFAMILY SSF52540 63 243 5.04E-12 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08925 38732b742126c6835ca90d8b2168670b 912 SUPERFAMILY SSF52540 14 31 5.04E-12 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08925 38732b742126c6835ca90d8b2168670b 912 Gene3D G3DSA:3.40.50.300 64 238 1.2E-7 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08925 38732b742126c6835ca90d8b2168670b 912 Gene3D G3DSA:3.40.50.300 10 28 1.2E-7 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16075 a4e794c373ebcfcfdb8ad4b8294b81ab 633 PANTHER PTHR10909 21 298 3.1E-171 T 19-04-2016 ALIDE2_RS16075 a4e794c373ebcfcfdb8ad4b8294b81ab 633 PANTHER PTHR10909 315 516 3.1E-171 T 19-04-2016 ALIDE2_RS16075 a4e794c373ebcfcfdb8ad4b8294b81ab 633 Gene3D G3DSA:2.40.110.10 169 298 4.8E-25 T 19-04-2016 ALIDE2_RS16075 a4e794c373ebcfcfdb8ad4b8294b81ab 633 Gene3D G3DSA:1.10.540.10 46 159 4.6E-8 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS16075 a4e794c373ebcfcfdb8ad4b8294b81ab 633 Gene3D G3DSA:1.20.140.10 322 495 1.1E-44 T 19-04-2016 ALIDE2_RS16075 a4e794c373ebcfcfdb8ad4b8294b81ab 633 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 21 44 3.5E-6 T 19-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria ALIDE2_RS16075 a4e794c373ebcfcfdb8ad4b8294b81ab 633 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 49 156 5.3E-6 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS16075 a4e794c373ebcfcfdb8ad4b8294b81ab 633 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 510 628 3.9E-25 T 19-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain ALIDE2_RS16075 a4e794c373ebcfcfdb8ad4b8294b81ab 633 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 171 291 1.1E-10 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS16075 a4e794c373ebcfcfdb8ad4b8294b81ab 633 SUPERFAMILY SSF56645 46 294 1.57E-41 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS16075 a4e794c373ebcfcfdb8ad4b8294b81ab 633 PANTHER PTHR10909:SF269 21 298 3.1E-171 T 19-04-2016 ALIDE2_RS16075 a4e794c373ebcfcfdb8ad4b8294b81ab 633 PANTHER PTHR10909:SF269 315 516 3.1E-171 T 19-04-2016 ALIDE2_RS16075 a4e794c373ebcfcfdb8ad4b8294b81ab 633 SUPERFAMILY SSF47203 326 499 7.89E-38 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS16075 a4e794c373ebcfcfdb8ad4b8294b81ab 633 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 322 491 6.7E-17 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS21985 e7b885b9c3729dae205da1d4739bf725 218 Pfam PF01323 DSBA-like thioredoxin domain 58 195 3.6E-13 T 19-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 ALIDE2_RS21985 e7b885b9c3729dae205da1d4739bf725 218 SUPERFAMILY SSF52833 33 211 4.86E-40 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS21985 e7b885b9c3729dae205da1d4739bf725 218 PIRSF PIRSF001488 12 217 1.2E-49 T 19-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL ALIDE2_RS21985 e7b885b9c3729dae205da1d4739bf725 218 Gene3D G3DSA:3.40.30.10 36 213 2.1E-54 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS21985 e7b885b9c3729dae205da1d4739bf725 218 PANTHER PTHR35891:SF2 8 212 5.2E-44 T 19-04-2016 ALIDE2_RS21985 e7b885b9c3729dae205da1d4739bf725 218 PANTHER PTHR35891 8 212 5.2E-44 T 19-04-2016 ALIDE2_RS07410 63d65f5f7d5dba26d3d7477deb0173b2 239 SMART SM00382 31 215 7.0E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS07410 63d65f5f7d5dba26d3d7477deb0173b2 239 PANTHER PTHR24220 8 238 5.8E-103 T 19-04-2016 ALIDE2_RS07410 63d65f5f7d5dba26d3d7477deb0173b2 239 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS07410 63d65f5f7d5dba26d3d7477deb0173b2 239 SUPERFAMILY SSF52540 6 236 5.01E-60 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07410 63d65f5f7d5dba26d3d7477deb0173b2 239 Gene3D G3DSA:3.40.50.300 3 236 1.6E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07410 63d65f5f7d5dba26d3d7477deb0173b2 239 PANTHER PTHR24220:SF568 8 238 5.8E-103 T 19-04-2016 ALIDE2_RS07410 63d65f5f7d5dba26d3d7477deb0173b2 239 Pfam PF00005 ABC transporter 23 167 3.3E-33 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS01955 954f11cb90f944e3b083eada6b7ad070 155 SUPERFAMILY SSF54427 22 138 4.05E-29 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS01955 954f11cb90f944e3b083eada6b7ad070 155 Pfam PF13474 SnoaL-like domain 28 138 3.6E-12 T 19-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain ALIDE2_RS01955 954f11cb90f944e3b083eada6b7ad070 155 Gene3D G3DSA:3.10.450.50 19 140 1.8E-33 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS07805 ae26cc99a28302bf31454bc654366503 128 PANTHER PTHR32182 1 61 2.8E-12 T 19-04-2016 ALIDE2_RS07805 ae26cc99a28302bf31454bc654366503 128 SUPERFAMILY SSF52540 1 51 1.33E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07805 ae26cc99a28302bf31454bc654366503 128 Pfam PF13175 AAA ATPase domain 1 86 5.7E-16 T 19-04-2016 ALIDE2_RS07805 ae26cc99a28302bf31454bc654366503 128 Gene3D G3DSA:3.40.50.300 1 90 2.2E-12 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07805 ae26cc99a28302bf31454bc654366503 128 PANTHER PTHR32182:SF13 1 61 2.8E-12 T 19-04-2016 ALIDE2_RS07275 9a7bd423caa734865ec35fbbaf15798d 430 PANTHER PTHR10742 1 262 6.0E-15 T 19-04-2016 ALIDE2_RS07275 9a7bd423caa734865ec35fbbaf15798d 430 PANTHER PTHR10742 279 430 6.0E-15 T 19-04-2016 ALIDE2_RS07275 9a7bd423caa734865ec35fbbaf15798d 430 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 3 430 2.7E-89 T 19-04-2016 IPR017830 Squalene-associated FAD-dependent desaturase ALIDE2_RS07275 9a7bd423caa734865ec35fbbaf15798d 430 SUPERFAMILY SSF51905 387 430 1.25E-38 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07275 9a7bd423caa734865ec35fbbaf15798d 430 SUPERFAMILY SSF51905 1 304 1.25E-38 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07275 9a7bd423caa734865ec35fbbaf15798d 430 Gene3D G3DSA:3.50.50.60 213 287 4.1E-30 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07275 9a7bd423caa734865ec35fbbaf15798d 430 Gene3D G3DSA:3.50.50.60 390 429 4.1E-30 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07275 9a7bd423caa734865ec35fbbaf15798d 430 Gene3D G3DSA:3.50.50.60 1 39 4.1E-30 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07275 9a7bd423caa734865ec35fbbaf15798d 430 Pfam PF01593 Flavin containing amine oxidoreductase 12 430 3.8E-18 T 19-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 ALIDE2_RS19705 fb88462cd0c0a68235b8863e5202911e 205 SUPERFAMILY SSF52972 1 195 8.63E-61 T 19-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like ALIDE2_RS19705 fb88462cd0c0a68235b8863e5202911e 205 Pfam PF01725 Ham1 family 3 192 7.3E-48 T 19-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 ALIDE2_RS19705 fb88462cd0c0a68235b8863e5202911e 205 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 1 196 41.847 T 19-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 ALIDE2_RS19705 fb88462cd0c0a68235b8863e5202911e 205 Gene3D G3DSA:3.90.950.10 1 196 7.2E-67 T 19-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like ALIDE2_RS19705 fb88462cd0c0a68235b8863e5202911e 205 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 2 192 4.0E-47 T 19-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 ALIDE2_RS19705 fb88462cd0c0a68235b8863e5202911e 205 PANTHER PTHR11067 1 202 2.7E-64 T 19-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 ALIDE2_RS19705 fb88462cd0c0a68235b8863e5202911e 205 PANTHER PTHR11067:SF9 1 202 2.7E-64 T 19-04-2016 ALIDE2_RS06460 bcbdb36fa272bffb5e3027ba21fd4f49 633 Pfam PF02719 Polysaccharide biosynthesis protein 281 586 2.3E-119 T 19-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain ALIDE2_RS06460 bcbdb36fa272bffb5e3027ba21fd4f49 633 PANTHER PTHR10366:SF256 280 570 3.9E-114 T 19-04-2016 ALIDE2_RS06460 bcbdb36fa272bffb5e3027ba21fd4f49 633 Gene3D G3DSA:3.40.50.720 280 477 1.1E-41 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS06460 bcbdb36fa272bffb5e3027ba21fd4f49 633 SUPERFAMILY SSF51735 141 268 2.32E-16 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS06460 bcbdb36fa272bffb5e3027ba21fd4f49 633 Pfam PF13727 CoA-binding domain 89 236 1.2E-6 T 19-04-2016 ALIDE2_RS06460 bcbdb36fa272bffb5e3027ba21fd4f49 633 Gene3D G3DSA:3.90.25.10 478 563 4.6E-6 T 19-04-2016 ALIDE2_RS06460 bcbdb36fa272bffb5e3027ba21fd4f49 633 SUPERFAMILY SSF51735 280 565 8.61E-53 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS06460 bcbdb36fa272bffb5e3027ba21fd4f49 633 Gene3D G3DSA:3.40.50.720 137 219 9.3E-13 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS06460 bcbdb36fa272bffb5e3027ba21fd4f49 633 PANTHER PTHR10366 280 570 3.9E-114 T 19-04-2016 ALIDE2_RS22915 11c477b232d9042181b700252add940d 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 325 3.8E-71 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22915 11c477b232d9042181b700252add940d 330 PANTHER PTHR30349:SF16 10 329 4.7E-75 T 19-04-2016 ALIDE2_RS22915 11c477b232d9042181b700252add940d 330 PANTHER PTHR30349 10 329 4.7E-75 T 19-04-2016 ALIDE2_RS22915 11c477b232d9042181b700252add940d 330 SUPERFAMILY SSF53850 38 295 7.96E-6 T 19-04-2016 ALIDE2_RS22915 11c477b232d9042181b700252add940d 330 PIRSF PIRSF017082 4 329 1.2E-66 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS04230 560820fa1b3edf1a3d6305d33f1a5478 342 Pfam PF01734 Patatin-like phospholipase 12 208 1.4E-21 T 19-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 ALIDE2_RS04230 560820fa1b3edf1a3d6305d33f1a5478 342 PANTHER PTHR14226 1 90 1.1E-45 T 19-04-2016 ALIDE2_RS04230 560820fa1b3edf1a3d6305d33f1a5478 342 PANTHER PTHR14226 122 253 1.1E-45 T 19-04-2016 ALIDE2_RS04230 560820fa1b3edf1a3d6305d33f1a5478 342 PANTHER PTHR14226:SF37 1 90 1.1E-45 T 19-04-2016 ALIDE2_RS04230 560820fa1b3edf1a3d6305d33f1a5478 342 PANTHER PTHR14226:SF37 122 253 1.1E-45 T 19-04-2016 ALIDE2_RS04230 560820fa1b3edf1a3d6305d33f1a5478 342 Gene3D G3DSA:3.40.1090.10 12 210 1.2E-8 T 19-04-2016 ALIDE2_RS04230 560820fa1b3edf1a3d6305d33f1a5478 342 SUPERFAMILY SSF52151 116 336 1.75E-48 T 19-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 ALIDE2_RS04230 560820fa1b3edf1a3d6305d33f1a5478 342 SUPERFAMILY SSF52151 9 88 1.75E-48 T 19-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 ALIDE2_RS22655 1c614ddaa801bfe75126ce362d3d6b6a 159 SUPERFAMILY SSF46785 44 145 2.44E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22655 1c614ddaa801bfe75126ce362d3d6b6a 159 PANTHER PTHR39515 71 128 8.7E-12 T 19-04-2016 ALIDE2_RS22655 1c614ddaa801bfe75126ce362d3d6b6a 159 Gene3D G3DSA:1.10.10.10 16 146 3.1E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22655 1c614ddaa801bfe75126ce362d3d6b6a 159 Pfam PF13463 Winged helix DNA-binding domain 56 119 1.0E-9 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ALIDE2_RS22655 1c614ddaa801bfe75126ce362d3d6b6a 159 PANTHER PTHR39515:SF1 71 128 8.7E-12 T 19-04-2016 ALIDE2_RS08240 ff2c197a37f69e21c18b92246e12324c 274 Gene3D G3DSA:3.40.50.10090 145 268 1.6E-6 T 19-04-2016 ALIDE2_RS08240 ff2c197a37f69e21c18b92246e12324c 274 Gene3D G3DSA:3.40.50.10090 10 118 1.3E-18 T 19-04-2016 ALIDE2_RS08240 ff2c197a37f69e21c18b92246e12324c 274 PANTHER PTHR38042:SF1 3 258 8.9E-22 T 19-04-2016 ALIDE2_RS08240 ff2c197a37f69e21c18b92246e12324c 274 Pfam PF02602 Uroporphyrinogen-III synthase HemD 22 257 1.2E-26 T 19-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS08240 ff2c197a37f69e21c18b92246e12324c 274 SUPERFAMILY SSF69618 9 268 2.88E-38 T 19-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS08240 ff2c197a37f69e21c18b92246e12324c 274 PANTHER PTHR38042 3 258 8.9E-22 T 19-04-2016 ALIDE2_RS04800 11bd0c29b08e988e6adc04aa695575fd 113 Gene3D G3DSA:3.30.70.120 15 112 1.8E-33 T 19-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ALIDE2_RS04800 11bd0c29b08e988e6adc04aa695575fd 113 SUPERFAMILY SSF54913 22 103 7.94E-5 T 19-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta ALIDE2_RS04800 11bd0c29b08e988e6adc04aa695575fd 113 Pfam PF11582 Protein of unknown function (DUF3240) 17 112 1.8E-29 T 19-04-2016 IPR021634 Protein of unknown function DUF3240 ALIDE2_RS00195 13481c8c3cffdd52ad53c12f6b8951d5 313 PANTHER PTHR38103 1 298 2.1E-75 T 19-04-2016 ALIDE2_RS00195 13481c8c3cffdd52ad53c12f6b8951d5 313 PANTHER PTHR38103:SF1 1 298 2.1E-75 T 19-04-2016 ALIDE2_RS00195 13481c8c3cffdd52ad53c12f6b8951d5 313 Pfam PF04381 Putative exonuclease, RdgC 2 293 1.3E-111 T 19-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 ALIDE2_RS14470 fcf693afb97013e3171f3e91f86785da 651 Pfam PF00294 pfkB family carbohydrate kinase 13 329 9.4E-43 T 19-04-2016 IPR011611 Carbohydrate kinase PfkB ALIDE2_RS14470 fcf693afb97013e3171f3e91f86785da 651 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 281 294 - T 19-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ALIDE2_RS14470 fcf693afb97013e3171f3e91f86785da 651 Gene3D G3DSA:3.40.1190.20 6 339 3.9E-76 T 19-04-2016 IPR029056 Ribokinase-like ALIDE2_RS14470 fcf693afb97013e3171f3e91f86785da 651 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 13 336 5.2E-110 T 19-04-2016 IPR030830 5-dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92|UniPathway: UPA00076 ALIDE2_RS14470 fcf693afb97013e3171f3e91f86785da 651 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 332 641 1.5E-128 T 19-04-2016 IPR018659 Protein of unknown function DUF2090 ALIDE2_RS14470 fcf693afb97013e3171f3e91f86785da 651 PANTHER PTHR10584 14 361 1.5E-125 T 19-04-2016 ALIDE2_RS14470 fcf693afb97013e3171f3e91f86785da 651 SUPERFAMILY SSF53613 12 336 6.24E-66 T 19-04-2016 IPR029056 Ribokinase-like ALIDE2_RS14470 fcf693afb97013e3171f3e91f86785da 651 PANTHER PTHR10584:SF194 14 361 1.5E-125 T 19-04-2016 ALIDE2_RS14540 00f93bfd7a9ded16311aaec145a2cde6 330 Pfam PF05661 Protein of unknown function (DUF808) 14 313 5.9E-111 T 19-04-2016 IPR008526 Inner membrane protein YedI ALIDE2_RS14540 00f93bfd7a9ded16311aaec145a2cde6 330 PANTHER PTHR30503 2 30 5.3E-92 T 19-04-2016 ALIDE2_RS14540 00f93bfd7a9ded16311aaec145a2cde6 330 PANTHER PTHR30503 49 329 5.3E-92 T 19-04-2016 ALIDE2_RS14540 00f93bfd7a9ded16311aaec145a2cde6 330 PIRSF PIRSF016660 31 326 1.7E-112 T 19-04-2016 IPR008526 Inner membrane protein YedI ALIDE2_RS01660 f6e1f26890c82b4580477365d19a8f22 177 Pfam PF03737 Demethylmenaquinone methyltransferase 14 160 3.7E-30 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS01660 f6e1f26890c82b4580477365d19a8f22 177 PANTHER PTHR33254 14 165 7.1E-34 T 19-04-2016 ALIDE2_RS01660 f6e1f26890c82b4580477365d19a8f22 177 Gene3D G3DSA:3.50.30.40 13 164 2.7E-38 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS01660 f6e1f26890c82b4580477365d19a8f22 177 SUPERFAMILY SSF89562 13 164 2.88E-32 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS01660 f6e1f26890c82b4580477365d19a8f22 177 PANTHER PTHR33254:SF1 14 165 7.1E-34 T 19-04-2016 ALIDE2_RS00420 072f915508b26d76f94fdbbdeae33484 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 323 4.2E-68 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00420 072f915508b26d76f94fdbbdeae33484 328 PIRSF PIRSF017082 1 326 2.6E-72 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00420 072f915508b26d76f94fdbbdeae33484 328 PANTHER PTHR30349:SF32 23 280 9.2E-68 T 19-04-2016 ALIDE2_RS00420 072f915508b26d76f94fdbbdeae33484 328 PANTHER PTHR30349 23 280 9.2E-68 T 19-04-2016 ALIDE2_RS00420 072f915508b26d76f94fdbbdeae33484 328 SUPERFAMILY SSF53850 120 291 5.44E-11 T 19-04-2016 ALIDE2_RS20950 07a002b6a1fbb2a429fe8f01ee6fcc58 248 PANTHER PTHR36307 5 245 4.4E-26 T 19-04-2016 ALIDE2_RS20950 07a002b6a1fbb2a429fe8f01ee6fcc58 248 SMART SM00858 124 186 3.5E-7 T 19-04-2016 IPR013974 SAF domain ALIDE2_RS20950 07a002b6a1fbb2a429fe8f01ee6fcc58 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 112 245 2.5E-37 T 19-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal ALIDE2_RS20950 07a002b6a1fbb2a429fe8f01ee6fcc58 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 53 245 5.1E-43 T 19-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal ALIDE2_RS15660 ff882706de1286d6c0fef6880c117b00 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.9E-17 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15660 ff882706de1286d6c0fef6880c117b00 308 Gene3D G3DSA:1.10.10.10 9 91 1.4E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15660 ff882706de1286d6c0fef6880c117b00 308 Gene3D G3DSA:3.40.190.10 183 274 5.6E-29 T 19-04-2016 ALIDE2_RS15660 ff882706de1286d6c0fef6880c117b00 308 SUPERFAMILY SSF46785 9 117 3.27E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15660 ff882706de1286d6c0fef6880c117b00 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 8.0E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15660 ff882706de1286d6c0fef6880c117b00 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 8.0E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15660 ff882706de1286d6c0fef6880c117b00 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 8.0E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15660 ff882706de1286d6c0fef6880c117b00 308 PANTHER PTHR30346 4 302 1.0E-75 T 19-04-2016 ALIDE2_RS15660 ff882706de1286d6c0fef6880c117b00 308 SUPERFAMILY SSF53850 94 302 1.26E-37 T 19-04-2016 ALIDE2_RS15660 ff882706de1286d6c0fef6880c117b00 308 Gene3D G3DSA:3.40.190.10 94 182 2.1E-21 T 19-04-2016 ALIDE2_RS15660 ff882706de1286d6c0fef6880c117b00 308 Pfam PF03466 LysR substrate binding domain 93 299 4.8E-38 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS15660 ff882706de1286d6c0fef6880c117b00 308 PANTHER PTHR30346:SF6 4 302 1.0E-75 T 19-04-2016 ALIDE2_RS18565 9c6ad1bef126888c06eb01e3cc7dc753 299 Gene3D G3DSA:2.40.10.10 192 292 2.8E-30 T 19-04-2016 ALIDE2_RS18565 9c6ad1bef126888c06eb01e3cc7dc753 299 Pfam PF13365 Trypsin-like peptidase domain 126 265 2.7E-31 T 19-04-2016 ALIDE2_RS18565 9c6ad1bef126888c06eb01e3cc7dc753 299 Gene3D G3DSA:2.40.10.10 88 191 2.8E-24 T 19-04-2016 ALIDE2_RS18565 9c6ad1bef126888c06eb01e3cc7dc753 299 PRINTS PR00834 HtrA/DegQ protease family signature 236 253 3.8E-33 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS18565 9c6ad1bef126888c06eb01e3cc7dc753 299 PRINTS PR00834 HtrA/DegQ protease family signature 135 147 3.8E-33 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS18565 9c6ad1bef126888c06eb01e3cc7dc753 299 PRINTS PR00834 HtrA/DegQ protease family signature 198 222 3.8E-33 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS18565 9c6ad1bef126888c06eb01e3cc7dc753 299 PRINTS PR00834 HtrA/DegQ protease family signature 156 176 3.8E-33 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS18565 9c6ad1bef126888c06eb01e3cc7dc753 299 PRINTS PR00834 HtrA/DegQ protease family signature 258 275 3.8E-33 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS18565 9c6ad1bef126888c06eb01e3cc7dc753 299 SUPERFAMILY SSF50494 93 291 3.13E-50 T 19-04-2016 IPR009003 Peptidase S1, PA clan ALIDE2_RS18565 9c6ad1bef126888c06eb01e3cc7dc753 299 PANTHER PTHR22939 1 288 7.2E-59 T 19-04-2016 ALIDE2_RS00110 000393ea21e2c37305573cf35edb1367 94 Gene3D G3DSA:3.30.70.20 9 90 5.3E-18 T 19-04-2016 ALIDE2_RS00110 000393ea21e2c37305573cf35edb1367 94 SUPERFAMILY SSF54862 7 78 1.67E-18 T 19-04-2016 ALIDE2_RS00110 000393ea21e2c37305573cf35edb1367 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 20 31 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS00110 000393ea21e2c37305573cf35edb1367 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 58 69 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS00110 000393ea21e2c37305573cf35edb1367 94 Pfam PF14697 4Fe-4S dicluster domain 14 75 1.0E-10 T 19-04-2016 ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 Gene3D G3DSA:1.10.390.10 312 462 2.5E-28 T 19-04-2016 ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 262 272 2.3E-9 T 19-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 130 145 2.3E-9 T 19-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 298 313 2.3E-9 T 19-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 317 329 2.3E-9 T 19-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 180 195 2.3E-9 T 19-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 Pfam PF01433 Peptidase family M1 46 392 1.7E-60 T 19-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 900 0.0 T 19-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 Pfam PF11940 Domain of unknown function (DUF3458) 472 858 8.7E-139 T 19-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 PANTHER PTHR11533:SF152 633 900 0.0 T 19-04-2016 ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 PANTHER PTHR11533:SF152 13 602 0.0 T 19-04-2016 ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 Gene3D G3DSA:1.25.50.10 564 901 2.0E-113 T 19-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 SUPERFAMILY SSF55486 213 462 2.32E-70 T 19-04-2016 ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 PANTHER PTHR11533 633 900 0.0 T 19-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 PANTHER PTHR11533 13 602 0.0 T 19-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 ALIDE2_RS17055 c5d2ea8eec13d36843aca60e20157c16 902 SUPERFAMILY SSF63737 7 196 1.57E-41 T 19-04-2016 ALIDE2_RS13125 287e534735c37b7d19c0aa74921d64da 221 PANTHER PTHR30450 1 221 1.1E-116 T 19-04-2016 ALIDE2_RS13125 287e534735c37b7d19c0aa74921d64da 221 SUPERFAMILY SSF161098 13 205 2.35E-48 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS13125 287e534735c37b7d19c0aa74921d64da 221 PANTHER PTHR30450:SF1 1 221 1.1E-116 T 19-04-2016 ALIDE2_RS13125 287e534735c37b7d19c0aa74921d64da 221 Gene3D G3DSA:1.10.3720.10 12 219 2.7E-45 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS13125 287e534735c37b7d19c0aa74921d64da 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 219 5.6E-27 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS03550 0c1e89226e9065f33e1ed0702b58b832 355 SUPERFAMILY SSF55729 165 331 5.65E-12 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS03550 0c1e89226e9065f33e1ed0702b58b832 355 Pfam PF13480 Acetyltransferase (GNAT) domain 177 317 2.4E-19 T 19-04-2016 ALIDE2_RS09500 6663b38b41edda3353dbc7c8acad28e3 371 SUPERFAMILY SSF53335 19 198 4.97E-23 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS09500 6663b38b41edda3353dbc7c8acad28e3 371 Gene3D G3DSA:3.40.50.150 11 175 1.1E-21 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS09500 6663b38b41edda3353dbc7c8acad28e3 371 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 133 157 9.5E-8 T 19-04-2016 ALIDE2_RS09500 6663b38b41edda3353dbc7c8acad28e3 371 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 104 116 9.5E-8 T 19-04-2016 ALIDE2_RS09500 6663b38b41edda3353dbc7c8acad28e3 371 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 44 58 9.5E-8 T 19-04-2016 ALIDE2_RS09500 6663b38b41edda3353dbc7c8acad28e3 371 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 107 113 - T 19-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ALIDE2_RS09825 f85041217df40259a9b63937e4b14c14 180 SUPERFAMILY SSF46785 2 133 2.12E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS09825 f85041217df40259a9b63937e4b14c14 180 Pfam PF02082 Transcriptional regulator 1 82 3.0E-23 T 19-04-2016 IPR000944 Transcription regulator Rrf2-type ALIDE2_RS09825 f85041217df40259a9b63937e4b14c14 180 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 19-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site ALIDE2_RS09825 f85041217df40259a9b63937e4b14c14 180 PANTHER PTHR33221 2 135 2.5E-40 T 19-04-2016 ALIDE2_RS09825 f85041217df40259a9b63937e4b14c14 180 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 2.2E-33 T 19-04-2016 IPR000944 Transcription regulator Rrf2-type ALIDE2_RS09825 f85041217df40259a9b63937e4b14c14 180 PANTHER PTHR33221:SF1 2 135 2.5E-40 T 19-04-2016 ALIDE2_RS09825 f85041217df40259a9b63937e4b14c14 180 Gene3D G3DSA:1.10.10.10 1 135 7.3E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20790 df036cad47080dd9f14dc004f812d824 209 Gene3D G3DSA:3.40.50.2300 2 120 3.2E-31 T 19-04-2016 ALIDE2_RS20790 df036cad47080dd9f14dc004f812d824 209 SMART SM00448 2 115 2.8E-22 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20790 df036cad47080dd9f14dc004f812d824 209 Gene3D G3DSA:1.10.10.10 121 209 1.1E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20790 df036cad47080dd9f14dc004f812d824 209 PANTHER PTHR26402 2 207 1.1E-56 T 19-04-2016 ALIDE2_RS20790 df036cad47080dd9f14dc004f812d824 209 SUPERFAMILY SSF46894 136 208 2.82E-17 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ALIDE2_RS20790 df036cad47080dd9f14dc004f812d824 209 PANTHER PTHR26402:SF458 2 207 1.1E-56 T 19-04-2016 ALIDE2_RS20790 df036cad47080dd9f14dc004f812d824 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 7.7E-10 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS20790 df036cad47080dd9f14dc004f812d824 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 7.7E-10 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS20790 df036cad47080dd9f14dc004f812d824 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 7.7E-10 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS20790 df036cad47080dd9f14dc004f812d824 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 1.6E-16 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS20790 df036cad47080dd9f14dc004f812d824 209 SMART SM00421 146 203 9.4E-15 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS20790 df036cad47080dd9f14dc004f812d824 209 Pfam PF00072 Response regulator receiver domain 4 115 2.5E-23 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20790 df036cad47080dd9f14dc004f812d824 209 SUPERFAMILY SSF52172 3 133 5.41E-29 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS04995 d142af20ecf5787079e7467d5f4c9d20 87 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 19-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 ALIDE2_RS04995 d142af20ecf5787079e7467d5f4c9d20 87 Gene3D G3DSA:3.40.30.10 1 79 2.7E-28 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS04995 d142af20ecf5787079e7467d5f4c9d20 87 Pfam PF00462 Glutaredoxin 4 64 4.1E-21 T 19-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ALIDE2_RS04995 d142af20ecf5787079e7467d5f4c9d20 87 PANTHER PTHR10168 3 86 1.6E-23 T 19-04-2016 ALIDE2_RS04995 d142af20ecf5787079e7467d5f4c9d20 87 SUPERFAMILY SSF52833 2 84 1.14E-26 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS04995 d142af20ecf5787079e7467d5f4c9d20 87 PRINTS PR00160 Glutaredoxin signature 47 60 5.4E-17 T 19-04-2016 IPR014025 Glutaredoxin subgroup ALIDE2_RS04995 d142af20ecf5787079e7467d5f4c9d20 87 PRINTS PR00160 Glutaredoxin signature 61 74 5.4E-17 T 19-04-2016 IPR014025 Glutaredoxin subgroup ALIDE2_RS04995 d142af20ecf5787079e7467d5f4c9d20 87 PRINTS PR00160 Glutaredoxin signature 4 22 5.4E-17 T 19-04-2016 IPR014025 Glutaredoxin subgroup ALIDE2_RS04995 d142af20ecf5787079e7467d5f4c9d20 87 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 7.6E-34 T 19-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 ALIDE2_RS20700 d02ce24620c255fb4f50cdd4762afba0 608 PIRSF PIRSF000719 6 598 2.5E-234 T 19-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 ALIDE2_RS20700 d02ce24620c255fb4f50cdd4762afba0 608 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 14 590 4.5E-256 T 19-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 ALIDE2_RS20700 d02ce24620c255fb4f50cdd4762afba0 608 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 14 594 0.0 T 19-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 ALIDE2_RS20700 d02ce24620c255fb4f50cdd4762afba0 608 PANTHER PTHR39559 5 601 5.8E-141 T 19-04-2016 ALIDE2_RS20700 d02ce24620c255fb4f50cdd4762afba0 608 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 6 595 44.974 T 19-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 ALIDE2_RS08280 432cb0b7cb80b97e60cdb5a7dfad9e45 485 Pfam PF06628 Catalase-related immune-responsive 416 476 3.9E-21 T 19-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ALIDE2_RS08280 432cb0b7cb80b97e60cdb5a7dfad9e45 485 PIRSF PIRSF038928 1 481 1.3E-222 T 19-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ALIDE2_RS08280 432cb0b7cb80b97e60cdb5a7dfad9e45 485 SUPERFAMILY SSF56634 3 482 5.76E-218 T 19-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ALIDE2_RS08280 432cb0b7cb80b97e60cdb5a7dfad9e45 485 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 19-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ALIDE2_RS08280 432cb0b7cb80b97e60cdb5a7dfad9e45 485 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 19-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ALIDE2_RS08280 432cb0b7cb80b97e60cdb5a7dfad9e45 485 PANTHER PTHR11465 7 478 6.5E-298 T 19-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ALIDE2_RS08280 432cb0b7cb80b97e60cdb5a7dfad9e45 485 Gene3D G3DSA:2.40.180.10 3 358 1.2E-179 T 19-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ALIDE2_RS08280 432cb0b7cb80b97e60cdb5a7dfad9e45 485 PRINTS PR00067 Catalase signature 84 102 4.4E-74 T 19-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ALIDE2_RS08280 432cb0b7cb80b97e60cdb5a7dfad9e45 485 PRINTS PR00067 Catalase signature 124 142 4.4E-74 T 19-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ALIDE2_RS08280 432cb0b7cb80b97e60cdb5a7dfad9e45 485 PRINTS PR00067 Catalase signature 321 347 4.4E-74 T 19-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ALIDE2_RS08280 432cb0b7cb80b97e60cdb5a7dfad9e45 485 PRINTS PR00067 Catalase signature 105 122 4.4E-74 T 19-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ALIDE2_RS08280 432cb0b7cb80b97e60cdb5a7dfad9e45 485 PRINTS PR00067 Catalase signature 21 44 4.4E-74 T 19-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ALIDE2_RS08280 432cb0b7cb80b97e60cdb5a7dfad9e45 485 PRINTS PR00067 Catalase signature 289 316 4.4E-74 T 19-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ALIDE2_RS08280 432cb0b7cb80b97e60cdb5a7dfad9e45 485 Pfam PF00199 Catalase 8 389 2.0E-190 T 19-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ALIDE2_RS08280 432cb0b7cb80b97e60cdb5a7dfad9e45 485 SMART SM01060 8 392 4.1E-291 T 19-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ALIDE2_RS22850 dcb8c0c319bcad2637948202ca9037d9 379 Gene3D G3DSA:1.10.10.10 326 373 6.1E-4 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22850 dcb8c0c319bcad2637948202ca9037d9 379 Gene3D G3DSA:3.40.50.450 125 304 2.0E-13 T 19-04-2016 ALIDE2_RS22850 dcb8c0c319bcad2637948202ca9037d9 379 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 82 303 3.0E-73 T 19-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 ALIDE2_RS22850 dcb8c0c319bcad2637948202ca9037d9 379 PANTHER PTHR32039:SF8 67 375 7.6E-102 T 19-04-2016 ALIDE2_RS22850 dcb8c0c319bcad2637948202ca9037d9 379 Pfam PF02481 DNA recombination-mediator protein A 83 294 9.6E-73 T 19-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 ALIDE2_RS22850 dcb8c0c319bcad2637948202ca9037d9 379 PANTHER PTHR32039 67 375 7.6E-102 T 19-04-2016 ALIDE2_RS22850 dcb8c0c319bcad2637948202ca9037d9 379 SUPERFAMILY SSF102405 86 303 5.49E-40 T 19-04-2016 ALIDE2_RS03565 03c38917b181497c5da71f01cd704ecf 284 SUPERFAMILY SSF53474 10 151 3.57E-23 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS03565 03c38917b181497c5da71f01cd704ecf 284 TIGRFAM TIGR03101 hydr2_PEP: exosortase A system-associated hydrolase 2 11 276 4.4E-84 T 19-04-2016 IPR017532 Hydrolase, ortholog 2, exosortase system type 1 associated ALIDE2_RS03565 03c38917b181497c5da71f01cd704ecf 284 Gene3D G3DSA:3.40.50.1820 13 152 3.2E-21 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS03565 03c38917b181497c5da71f01cd704ecf 284 Pfam PF12146 Serine aminopeptidase, S33 36 158 3.0E-7 T 19-04-2016 IPR022742 Serine aminopeptidase, S33 ALIDE2_RS06175 fbb2fe5bba5c9569ea2cf1accb6090be 410 Pfam PF00672 HAMP domain 157 225 5.6E-7 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS06175 fbb2fe5bba5c9569ea2cf1accb6090be 410 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 401 5.7E-44 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS06175 fbb2fe5bba5c9569ea2cf1accb6090be 410 SMART SM00304 176 229 1.5E-4 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS06175 fbb2fe5bba5c9569ea2cf1accb6090be 410 PANTHER PTHR10799 172 409 1.8E-34 T 19-04-2016 ALIDE2_RS06175 fbb2fe5bba5c9569ea2cf1accb6090be 410 SUPERFAMILY SSF55073 247 400 1.02E-45 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS06175 fbb2fe5bba5c9569ea2cf1accb6090be 410 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 398 1.6E-45 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS06175 fbb2fe5bba5c9569ea2cf1accb6090be 410 PANTHER PTHR10799:SF774 172 409 1.8E-34 T 19-04-2016 ALIDE2_RS06175 fbb2fe5bba5c9569ea2cf1accb6090be 410 Pfam PF17152 Periplasmic sensor domain 39 138 2.3E-22 T 19-04-2016 IPR033417 Periplasmic sensor domain CHASE8 UniPathway: UPA00599 ALIDE2_RS06175 fbb2fe5bba5c9569ea2cf1accb6090be 410 SMART SM00267 231 405 1.8E-62 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS06175 fbb2fe5bba5c9569ea2cf1accb6090be 410 Gene3D G3DSA:3.30.70.270 244 405 1.2E-55 T 19-04-2016 ALIDE2_RS19255 9c73270a0311ffcf643ed0c61f20becf 134 Gene3D G3DSA:3.40.50.2300 7 129 2.5E-36 T 19-04-2016 ALIDE2_RS19255 9c73270a0311ffcf643ed0c61f20becf 134 SMART SM00448 10 123 3.2E-35 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS19255 9c73270a0311ffcf643ed0c61f20becf 134 Pfam PF00072 Response regulator receiver domain 12 124 8.9E-26 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS19255 9c73270a0311ffcf643ed0c61f20becf 134 PANTHER PTHR26402:SF568 10 126 1.8E-61 T 19-04-2016 ALIDE2_RS19255 9c73270a0311ffcf643ed0c61f20becf 134 PANTHER PTHR26402 10 126 1.8E-61 T 19-04-2016 ALIDE2_RS19255 9c73270a0311ffcf643ed0c61f20becf 134 SUPERFAMILY SSF52172 9 127 1.31E-35 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 Gene3D G3DSA:1.20.120.140 4 88 2.1E-31 T 19-04-2016 ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 SMART SM00963 1 86 1.4E-30 T 19-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 454 32.207 T 19-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 Gene3D G3DSA:3.40.50.300 94 297 6.4E-73 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 SUPERFAMILY SSF47446 298 432 2.88E-41 T 19-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 2.7E-20 T 19-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 Pfam PF00448 SRP54-type protein, GTPase domain 100 295 6.7E-69 T 19-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 SMART SM00962 100 296 1.1E-107 T 19-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 SMART SM00382 99 246 1.5E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 PANTHER PTHR11564:SF7 1 435 1.6E-227 T 19-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 Pfam PF02978 Signal peptide binding domain 329 428 5.7E-30 T 19-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 TIGRFAM TIGR00959 ffh: signal recognition particle protein 4 430 4.9E-167 T 19-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 PANTHER PTHR11564 1 435 1.6E-227 T 19-04-2016 ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 Gene3D G3DSA:1.10.260.30 329 432 8.0E-36 T 19-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 SUPERFAMILY SSF47364 2 93 3.93E-25 T 19-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 19-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 ALIDE2_RS19050 a1ae65ada7e9cc24ca42f8eceaf7db55 459 SUPERFAMILY SSF52540 92 298 1.29E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02695 0bdf0603165ecdab7798cd7f356170e8 150 Gene3D G3DSA:3.40.390.30 26 148 6.7E-44 T 19-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 ALIDE2_RS02695 0bdf0603165ecdab7798cd7f356170e8 150 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 111 121 - T 19-04-2016 IPR020549 Endoribonuclease YbeY, conserved site ALIDE2_RS02695 0bdf0603165ecdab7798cd7f356170e8 150 PANTHER PTHR22881 25 149 1.1E-36 T 19-04-2016 ALIDE2_RS02695 0bdf0603165ecdab7798cd7f356170e8 150 SUPERFAMILY SSF55486 26 148 7.81E-41 T 19-04-2016 ALIDE2_RS02695 0bdf0603165ecdab7798cd7f356170e8 150 Pfam PF02130 Uncharacterized protein family UPF0054 27 142 7.2E-30 T 19-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ALIDE2_RS02695 0bdf0603165ecdab7798cd7f356170e8 150 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 41 143 1.8E-31 T 19-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ALIDE2_RS02695 0bdf0603165ecdab7798cd7f356170e8 150 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 7 146 21.391 T 19-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ALIDE2_RS12735 9f03d3c55d60e52ad3cf18407a0ca0f9 249 SMART SM00893 23 211 1.2E-68 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS12735 9f03d3c55d60e52ad3cf18407a0ca0f9 249 PANTHER PTHR21294:SF8 1 249 1.2E-158 T 19-04-2016 ALIDE2_RS12735 9f03d3c55d60e52ad3cf18407a0ca0f9 249 SUPERFAMILY SSF52402 1 242 8.37E-87 T 19-04-2016 ALIDE2_RS12735 9f03d3c55d60e52ad3cf18407a0ca0f9 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 19-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 ALIDE2_RS12735 9f03d3c55d60e52ad3cf18407a0ca0f9 249 PIRSF PIRSF000090 1 249 6.5E-87 T 19-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 ALIDE2_RS12735 9f03d3c55d60e52ad3cf18407a0ca0f9 249 Pfam PF01012 Electron transfer flavoprotein domain 28 206 6.8E-47 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS12735 9f03d3c55d60e52ad3cf18407a0ca0f9 249 PANTHER PTHR21294 1 249 1.2E-158 T 19-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 ALIDE2_RS12735 9f03d3c55d60e52ad3cf18407a0ca0f9 249 Gene3D G3DSA:3.40.50.620 1 247 2.0E-105 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS18960 9ea65c5510e195d665f9b044f536037b 372 PIRSF PIRSF001361 10 372 1.0E-157 T 19-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 ALIDE2_RS18960 9ea65c5510e195d665f9b044f536037b 372 SUPERFAMILY SSF51569 24 369 2.41E-133 T 19-04-2016 ALIDE2_RS18960 9ea65c5510e195d665f9b044f536037b 372 PANTHER PTHR21225 1 372 5.7E-215 T 19-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 ALIDE2_RS18960 9ea65c5510e195d665f9b044f536037b 372 Pfam PF00793 DAHP synthetase I family 61 357 9.2E-103 T 19-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 ALIDE2_RS18960 9ea65c5510e195d665f9b044f536037b 372 Gene3D G3DSA:3.20.20.70 25 371 1.1E-152 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS18960 9ea65c5510e195d665f9b044f536037b 372 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 22 370 2.2E-161 T 19-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 ALIDE2_RS08810 0a841642e712cc36cf6340e94121611e 197 PIRSF PIRSF000349 2 196 2.7E-42 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS08810 0a841642e712cc36cf6340e94121611e 197 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 5.4E-23 T 19-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS08810 0a841642e712cc36cf6340e94121611e 197 PANTHER PTHR11404:SF6 1 192 8.5E-48 T 19-04-2016 ALIDE2_RS08810 0a841642e712cc36cf6340e94121611e 197 SUPERFAMILY SSF54719 82 193 3.14E-31 T 19-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS08810 0a841642e712cc36cf6340e94121611e 197 SUPERFAMILY SSF46609 1 83 1.66E-16 T 19-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS08810 0a841642e712cc36cf6340e94121611e 197 PANTHER PTHR11404 1 192 8.5E-48 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 ALIDE2_RS15325 a697feed2715a73514ee77c774f67634 231 SUPERFAMILY SSF48498 104 188 3.32E-8 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS15325 a697feed2715a73514ee77c774f67634 231 Gene3D G3DSA:1.10.10.60 3 56 9.3E-10 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS15325 a697feed2715a73514ee77c774f67634 231 SUPERFAMILY SSF46689 2 67 3.39E-9 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS15325 a697feed2715a73514ee77c774f67634 231 Gene3D G3DSA:1.10.357.10 57 186 2.1E-10 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS00795 d0fdc86e8057c9ce7f5beed71cafc2d5 394 Gene3D G3DSA:3.30.1540.10 227 304 1.3E-18 T 19-04-2016 ALIDE2_RS00795 d0fdc86e8057c9ce7f5beed71cafc2d5 394 SUPERFAMILY SSF89796 10 392 6.93E-109 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00795 d0fdc86e8057c9ce7f5beed71cafc2d5 394 PANTHER PTHR24023:SF593 77 379 8.4E-35 T 19-04-2016 ALIDE2_RS00795 d0fdc86e8057c9ce7f5beed71cafc2d5 394 PANTHER PTHR24023 77 379 8.4E-35 T 19-04-2016 ALIDE2_RS00795 d0fdc86e8057c9ce7f5beed71cafc2d5 394 Pfam PF02515 CoA-transferase family III 12 368 2.7E-99 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS00795 d0fdc86e8057c9ce7f5beed71cafc2d5 394 Gene3D G3DSA:3.40.50.10540 11 221 2.3E-92 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00795 d0fdc86e8057c9ce7f5beed71cafc2d5 394 Gene3D G3DSA:3.40.50.10540 305 392 2.3E-92 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS09165 425ff504ea16fd5dc1d95fa2f149851e 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 370 2.8E-20 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS09165 425ff504ea16fd5dc1d95fa2f149851e 379 PANTHER PTHR10909:SF302 15 352 8.5E-49 T 19-04-2016 ALIDE2_RS09165 425ff504ea16fd5dc1d95fa2f149851e 379 Gene3D G3DSA:1.20.140.10 212 370 1.3E-29 T 19-04-2016 ALIDE2_RS09165 425ff504ea16fd5dc1d95fa2f149851e 379 PANTHER PTHR10909 15 352 8.5E-49 T 19-04-2016 ALIDE2_RS09165 425ff504ea16fd5dc1d95fa2f149851e 379 SUPERFAMILY SSF56645 14 220 3.27E-32 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS09165 425ff504ea16fd5dc1d95fa2f149851e 379 Gene3D G3DSA:2.40.110.10 130 211 4.7E-5 T 19-04-2016 ALIDE2_RS09165 425ff504ea16fd5dc1d95fa2f149851e 379 SUPERFAMILY SSF47203 230 370 3.38E-33 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS09165 425ff504ea16fd5dc1d95fa2f149851e 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 125 1.2E-15 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS09165 425ff504ea16fd5dc1d95fa2f149851e 379 Gene3D G3DSA:1.10.540.10 15 126 3.5E-18 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS21300 6b3a238e4af66a23d61bc0cb7625f34b 216 SUPERFAMILY SSF53474 4 214 6.99E-34 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS21300 6b3a238e4af66a23d61bc0cb7625f34b 216 Pfam PF01738 Dienelactone hydrolase family 20 210 2.5E-4 T 19-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 ALIDE2_RS21300 6b3a238e4af66a23d61bc0cb7625f34b 216 Gene3D G3DSA:3.40.50.1820 6 213 1.2E-41 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS06995 86b4e269379f1cfac46ed91b4cd8aa6c 300 SUPERFAMILY SSF51261 67 297 1.26E-48 T 19-04-2016 IPR011055 Duplicated hybrid motif ALIDE2_RS06995 86b4e269379f1cfac46ed91b4cd8aa6c 300 Pfam PF01551 Peptidase family M23 200 293 1.4E-30 T 19-04-2016 IPR016047 Peptidase M23 ALIDE2_RS06995 86b4e269379f1cfac46ed91b4cd8aa6c 300 PANTHER PTHR21666:SF222 182 298 2.2E-40 T 19-04-2016 ALIDE2_RS06995 86b4e269379f1cfac46ed91b4cd8aa6c 300 SMART SM00257 67 111 1.4E-9 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS06995 86b4e269379f1cfac46ed91b4cd8aa6c 300 Gene3D G3DSA:3.10.350.10 65 111 5.0E-16 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS06995 86b4e269379f1cfac46ed91b4cd8aa6c 300 Gene3D G3DSA:2.70.70.10 169 298 6.1E-38 T 19-04-2016 ALIDE2_RS06995 86b4e269379f1cfac46ed91b4cd8aa6c 300 PANTHER PTHR21666 182 298 2.2E-40 T 19-04-2016 ALIDE2_RS06995 86b4e269379f1cfac46ed91b4cd8aa6c 300 Pfam PF01476 LysM domain 68 110 2.4E-11 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS17745 c38e99015df694e81aa0f0b9dbd7ffd8 220 SMART SM00382 29 215 3.6E-13 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS17745 c38e99015df694e81aa0f0b9dbd7ffd8 220 SUPERFAMILY SSF52540 4 212 1.43E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17745 c38e99015df694e81aa0f0b9dbd7ffd8 220 Gene3D G3DSA:3.40.50.300 3 212 3.1E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17745 c38e99015df694e81aa0f0b9dbd7ffd8 220 PANTHER PTHR24220 6 211 4.0E-78 T 19-04-2016 ALIDE2_RS17745 c38e99015df694e81aa0f0b9dbd7ffd8 220 Pfam PF00005 ABC transporter 21 166 3.2E-33 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS17745 c38e99015df694e81aa0f0b9dbd7ffd8 220 PANTHER PTHR24220:SF430 6 211 4.0E-78 T 19-04-2016 ALIDE2_RS17745 c38e99015df694e81aa0f0b9dbd7ffd8 220 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS20410 4d257fedfac715d0491cc90323fb2b6f 302 Gene3D G3DSA:1.10.10.10 1 86 2.3E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20410 4d257fedfac715d0491cc90323fb2b6f 302 Gene3D G3DSA:3.40.190.10 215 256 2.3E-5 T 19-04-2016 ALIDE2_RS20410 4d257fedfac715d0491cc90323fb2b6f 302 PANTHER PTHR30537:SF5 1 297 2.3E-66 T 19-04-2016 ALIDE2_RS20410 4d257fedfac715d0491cc90323fb2b6f 302 SUPERFAMILY SSF46785 1 110 1.4E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20410 4d257fedfac715d0491cc90323fb2b6f 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.4E-15 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS20410 4d257fedfac715d0491cc90323fb2b6f 302 PANTHER PTHR30537 1 297 2.3E-66 T 19-04-2016 ALIDE2_RS20410 4d257fedfac715d0491cc90323fb2b6f 302 Gene3D G3DSA:3.40.190.10 91 188 8.3E-14 T 19-04-2016 ALIDE2_RS20410 4d257fedfac715d0491cc90323fb2b6f 302 SUPERFAMILY SSF53850 88 293 1.16E-33 T 19-04-2016 ALIDE2_RS20410 4d257fedfac715d0491cc90323fb2b6f 302 Pfam PF03466 LysR substrate binding domain 87 291 1.4E-32 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS01220 d9ee25d882aad1e1644169afce8591ec 371 Gene3D G3DSA:3.40.50.2000 186 343 1.0E-23 T 19-04-2016 ALIDE2_RS01220 d9ee25d882aad1e1644169afce8591ec 371 Pfam PF00534 Glycosyl transferases group 1 192 344 3.7E-27 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 ALIDE2_RS01220 d9ee25d882aad1e1644169afce8591ec 371 SUPERFAMILY SSF53756 9 363 8.07E-67 T 19-04-2016 ALIDE2_RS01220 d9ee25d882aad1e1644169afce8591ec 371 Pfam PF13439 Glycosyltransferase Family 4 19 174 4.5E-14 T 19-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ALIDE2_RS01220 d9ee25d882aad1e1644169afce8591ec 371 PANTHER PTHR12526 3 365 9.3E-46 T 19-04-2016 ALIDE2_RS15870 9afad3ba07df798ce686fb31d756f66e 214 SMART SM00421 145 202 4.7E-22 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS15870 9afad3ba07df798ce686fb31d756f66e 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.1E-13 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS15870 9afad3ba07df798ce686fb31d756f66e 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.1E-13 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS15870 9afad3ba07df798ce686fb31d756f66e 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.1E-13 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS15870 9afad3ba07df798ce686fb31d756f66e 214 PANTHER PTHR26402:SF613 10 200 1.8E-55 T 19-04-2016 ALIDE2_RS15870 9afad3ba07df798ce686fb31d756f66e 214 Gene3D G3DSA:3.40.50.2300 12 147 4.0E-30 T 19-04-2016 ALIDE2_RS15870 9afad3ba07df798ce686fb31d756f66e 214 PANTHER PTHR26402 10 200 1.8E-55 T 19-04-2016 ALIDE2_RS15870 9afad3ba07df798ce686fb31d756f66e 214 SMART SM00448 10 121 5.8E-23 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS15870 9afad3ba07df798ce686fb31d756f66e 214 SUPERFAMILY SSF52172 12 168 2.85E-29 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS15870 9afad3ba07df798ce686fb31d756f66e 214 Gene3D G3DSA:1.10.10.10 148 203 2.0E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15870 9afad3ba07df798ce686fb31d756f66e 214 Pfam PF00072 Response regulator receiver domain 12 121 3.7E-22 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS15870 9afad3ba07df798ce686fb31d756f66e 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 200 7.9E-21 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ALIDE2_RS23120 1de19d7d2e335cde884b18955c9a5330 159 Pfam PF10029 Predicted periplasmic protein (DUF2271) 25 152 2.4E-34 T 19-04-2016 IPR014469 Protein of unknown function DUF2271 ALIDE2_RS00155 4098a94997a999df39f5ccda4920852b 342 Gene3D G3DSA:1.20.140.10 198 321 1.6E-29 T 19-04-2016 ALIDE2_RS00155 4098a94997a999df39f5ccda4920852b 342 PANTHER PTHR10909:SF302 1 320 6.6E-41 T 19-04-2016 ALIDE2_RS00155 4098a94997a999df39f5ccda4920852b 342 SUPERFAMILY SSF47203 197 327 2.58E-32 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00155 4098a94997a999df39f5ccda4920852b 342 PANTHER PTHR10909 1 320 6.6E-41 T 19-04-2016 ALIDE2_RS00155 4098a94997a999df39f5ccda4920852b 342 SUPERFAMILY SSF56645 1 161 7.07E-19 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS00155 4098a94997a999df39f5ccda4920852b 342 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 84 1.6E-13 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00155 4098a94997a999df39f5ccda4920852b 342 Gene3D G3DSA:1.10.540.10 1 92 1.5E-17 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00155 4098a94997a999df39f5ccda4920852b 342 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 203 322 9.6E-20 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS06330 979fa84d8f977122dcada0806e3464d4 332 Gene3D G3DSA:2.50.20.10 102 194 9.5E-6 T 19-04-2016 ALIDE2_RS06330 979fa84d8f977122dcada0806e3464d4 332 Pfam PF03888 MucB/RseB N-terminal domain 32 208 4.8E-53 T 19-04-2016 IPR033434 MucB/RseB, N-terminal ALIDE2_RS06330 979fa84d8f977122dcada0806e3464d4 332 PANTHER PTHR38782:SF1 7 332 8.9E-40 T 19-04-2016 ALIDE2_RS06330 979fa84d8f977122dcada0806e3464d4 332 PANTHER PTHR38782 7 332 8.9E-40 T 19-04-2016 ALIDE2_RS06330 979fa84d8f977122dcada0806e3464d4 332 Pfam PF17188 MucB/RseB C-terminal domain 227 328 1.3E-22 T 19-04-2016 IPR033436 MucB/RseB, C-terminal ALIDE2_RS06330 979fa84d8f977122dcada0806e3464d4 332 PIRSF PIRSF005427 1 332 9.6E-74 T 19-04-2016 IPR005588 MucB/RseB ALIDE2_RS08705 23fb60855e2ea219f495b99e6cbe74e1 186 Pfam PF11198 Protein of unknown function (DUF2857) 8 182 2.8E-62 T 19-04-2016 IPR021364 Protein of unknown function DUF2857 ALIDE2_RS19810 47b43cd77de0d85bb39ece6d2ab1994e 174 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 12 158 5.1E-46 T 19-04-2016 IPR011747 Conserved hypothetical protein CHP02241 ALIDE2_RS19810 47b43cd77de0d85bb39ece6d2ab1994e 174 Pfam PF06841 T4-like virus tail tube protein gp19 15 157 2.8E-46 T 19-04-2016 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 ALIDE2_RS19810 47b43cd77de0d85bb39ece6d2ab1994e 174 PANTHER PTHR38009:SF1 6 160 3.9E-43 T 19-04-2016 ALIDE2_RS19810 47b43cd77de0d85bb39ece6d2ab1994e 174 PANTHER PTHR38009 6 160 3.9E-43 T 19-04-2016 ALIDE2_RS21855 98d45d2d7337dd356299b9ca80114b00 361 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS21855 98d45d2d7337dd356299b9ca80114b00 361 Pfam PF16074 Type IV Pilus-assembly protein W 238 355 4.8E-11 T 19-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 ALIDE2_RS11110 5601b7f4c6f7c5291232f4a066f56605 215 PANTHER PTHR19136 5 206 9.6E-32 T 19-04-2016 ALIDE2_RS11110 5601b7f4c6f7c5291232f4a066f56605 215 Pfam PF12804 MobA-like NTP transferase domain 10 181 3.6E-35 T 19-04-2016 IPR025877 MobA-like NTP transferase ALIDE2_RS11110 5601b7f4c6f7c5291232f4a066f56605 215 Gene3D G3DSA:3.90.550.10 6 207 3.5E-36 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS11110 5601b7f4c6f7c5291232f4a066f56605 215 PANTHER PTHR19136:SF78 5 206 9.6E-32 T 19-04-2016 ALIDE2_RS11110 5601b7f4c6f7c5291232f4a066f56605 215 SUPERFAMILY SSF53448 8 202 1.91E-33 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS11450 5ca6e4038872497147c87ebc18e2d5f8 296 PIRSF PIRSF000103 1 292 1.8E-67 T 19-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 ALIDE2_RS11450 5ca6e4038872497147c87ebc18e2d5f8 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 10 23 - T 19-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 ALIDE2_RS11450 5ca6e4038872497147c87ebc18e2d5f8 296 SUPERFAMILY SSF48179 169 291 1.93E-37 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS11450 5ca6e4038872497147c87ebc18e2d5f8 296 PANTHER PTHR22981:SF27 1 294 1.3E-125 T 19-04-2016 ALIDE2_RS11450 5ca6e4038872497147c87ebc18e2d5f8 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 164 1.9E-39 T 19-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 ALIDE2_RS11450 5ca6e4038872497147c87ebc18e2d5f8 296 SUPERFAMILY SSF51735 7 167 1.58E-39 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11450 5ca6e4038872497147c87ebc18e2d5f8 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 289 2.1E-37 T 19-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ALIDE2_RS11450 5ca6e4038872497147c87ebc18e2d5f8 296 Gene3D G3DSA:1.10.1040.10 169 290 9.4E-47 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS11450 5ca6e4038872497147c87ebc18e2d5f8 296 Gene3D G3DSA:3.40.50.720 4 167 1.4E-49 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS11450 5ca6e4038872497147c87ebc18e2d5f8 296 PANTHER PTHR22981 1 294 1.3E-125 T 19-04-2016 ALIDE2_RS01560 c6ca8960ade0ae4cab987467f5f565ba 266 SUPERFAMILY SSF56219 2 262 1.57E-67 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase ALIDE2_RS01560 c6ca8960ade0ae4cab987467f5f565ba 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 255 1.1E-20 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase ALIDE2_RS01560 c6ca8960ade0ae4cab987467f5f565ba 266 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 3 261 1.2E-68 T 19-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 ALIDE2_RS01560 c6ca8960ade0ae4cab987467f5f565ba 266 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 3 260 1.7E-65 T 19-04-2016 ALIDE2_RS01560 c6ca8960ade0ae4cab987467f5f565ba 266 Gene3D G3DSA:3.60.10.10 2 263 1.1E-84 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase ALIDE2_RS01560 c6ca8960ade0ae4cab987467f5f565ba 266 PANTHER PTHR22748 2 266 1.4E-88 T 19-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 ALIDE2_RS05355 4722b56a3833dd31ff7d3c7d2911dfc3 327 PANTHER PTHR30426 5 317 1.6E-153 T 19-04-2016 ALIDE2_RS05355 4722b56a3833dd31ff7d3c7d2911dfc3 327 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 287 37.882 T 19-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 ALIDE2_RS05355 4722b56a3833dd31ff7d3c7d2911dfc3 327 Pfam PF02401 LytB protein 7 283 1.6E-94 T 19-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 ALIDE2_RS05355 4722b56a3833dd31ff7d3c7d2911dfc3 327 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 285 5.9E-102 T 19-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 ALIDE2_RS03265 31c0ecda117ef2d259c3e38bac1112e4 256 Pfam PF00106 short chain dehydrogenase 6 187 6.7E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS03265 31c0ecda117ef2d259c3e38bac1112e4 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.5E-20 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS03265 31c0ecda117ef2d259c3e38bac1112e4 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.5E-20 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS03265 31c0ecda117ef2d259c3e38bac1112e4 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 2.5E-20 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS03265 31c0ecda117ef2d259c3e38bac1112e4 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.5E-20 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS03265 31c0ecda117ef2d259c3e38bac1112e4 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 2.5E-20 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS03265 31c0ecda117ef2d259c3e38bac1112e4 256 SUPERFAMILY SSF51735 1 250 1.14E-55 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03265 31c0ecda117ef2d259c3e38bac1112e4 256 PANTHER PTHR24322 149 180 2.2E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS03265 31c0ecda117ef2d259c3e38bac1112e4 256 PANTHER PTHR24322 10 133 2.2E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS03265 31c0ecda117ef2d259c3e38bac1112e4 256 PANTHER PTHR24322:SF329 149 180 2.2E-37 T 19-04-2016 ALIDE2_RS03265 31c0ecda117ef2d259c3e38bac1112e4 256 PANTHER PTHR24322:SF329 10 133 2.2E-37 T 19-04-2016 ALIDE2_RS03265 31c0ecda117ef2d259c3e38bac1112e4 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS03265 31c0ecda117ef2d259c3e38bac1112e4 256 Gene3D G3DSA:3.40.50.720 4 213 4.8E-54 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS18100 d24972f2ccc22f2dbe7e6330c1c6083a 178 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 146 5.2E-7 T 19-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 ALIDE2_RS23090 eaabef0ec6186ca98af2511d254f4c4a 225 SUPERFAMILY SSF52172 1 171 1.85E-38 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS23090 eaabef0ec6186ca98af2511d254f4c4a 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.2E-24 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS23090 eaabef0ec6186ca98af2511d254f4c4a 225 PANTHER PTHR26402:SF316 1 218 7.4E-94 T 19-04-2016 ALIDE2_RS23090 eaabef0ec6186ca98af2511d254f4c4a 225 Pfam PF00072 Response regulator receiver domain 3 112 3.9E-24 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS23090 eaabef0ec6186ca98af2511d254f4c4a 225 Gene3D G3DSA:3.40.50.2300 1 121 5.8E-36 T 19-04-2016 ALIDE2_RS23090 eaabef0ec6186ca98af2511d254f4c4a 225 PANTHER PTHR26402 1 218 7.4E-94 T 19-04-2016 ALIDE2_RS23090 eaabef0ec6186ca98af2511d254f4c4a 225 SMART SM00448 1 112 5.5E-38 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS23090 eaabef0ec6186ca98af2511d254f4c4a 225 Gene3D G3DSA:1.10.10.10 122 217 4.8E-29 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23090 eaabef0ec6186ca98af2511d254f4c4a 225 SMART SM00862 145 216 5.1E-26 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS03835 8c83e10d39a6c711b40946bbdf338b4e 164 PANTHER PTHR30289 1 164 2.5E-79 T 19-04-2016 ALIDE2_RS03835 8c83e10d39a6c711b40946bbdf338b4e 164 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 24 162 6.4E-39 T 19-04-2016 IPR005247 YbhB/YbcL ALIDE2_RS03835 8c83e10d39a6c711b40946bbdf338b4e 164 SUPERFAMILY SSF49777 4 163 1.31E-52 T 19-04-2016 IPR008914 Phosphatidylethanolamine-binding protein ALIDE2_RS03835 8c83e10d39a6c711b40946bbdf338b4e 164 Pfam PF01161 Phosphatidylethanolamine-binding protein 29 162 1.7E-36 T 19-04-2016 IPR008914 Phosphatidylethanolamine-binding protein ALIDE2_RS03835 8c83e10d39a6c711b40946bbdf338b4e 164 PANTHER PTHR30289:SF0 1 164 2.5E-79 T 19-04-2016 ALIDE2_RS03835 8c83e10d39a6c711b40946bbdf338b4e 164 Gene3D G3DSA:3.90.280.10 3 164 2.1E-56 T 19-04-2016 IPR008914 Phosphatidylethanolamine-binding protein ALIDE2_RS15755 94a7e5a09b34c9a37bc9c47d8ece6ef6 258 Gene3D G3DSA:3.40.50.720 233 257 8.8E-45 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS15755 94a7e5a09b34c9a37bc9c47d8ece6ef6 258 Gene3D G3DSA:3.40.50.720 10 192 8.8E-45 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS15755 94a7e5a09b34c9a37bc9c47d8ece6ef6 258 SUPERFAMILY SSF69572 12 257 3.4E-55 T 19-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ALIDE2_RS15755 94a7e5a09b34c9a37bc9c47d8ece6ef6 258 PANTHER PTHR10953 12 167 1.1E-72 T 19-04-2016 ALIDE2_RS15755 94a7e5a09b34c9a37bc9c47d8ece6ef6 258 Pfam PF00899 ThiF family 20 160 6.7E-35 T 19-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ALIDE2_RS15755 94a7e5a09b34c9a37bc9c47d8ece6ef6 258 PANTHER PTHR10953:SF159 12 167 1.1E-72 T 19-04-2016 ALIDE2_RS15755 94a7e5a09b34c9a37bc9c47d8ece6ef6 258 PANTHER PTHR10953 199 243 1.1E-72 T 19-04-2016 ALIDE2_RS15755 94a7e5a09b34c9a37bc9c47d8ece6ef6 258 PANTHER PTHR10953:SF159 199 243 1.1E-72 T 19-04-2016 ALIDE2_RS05370 adadd8735db6d323495ef325a2f79b2e 438 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 237 412 3.1E-40 T 19-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS05370 adadd8735db6d323495ef325a2f79b2e 438 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 112 2.3E-25 T 19-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 ALIDE2_RS05370 adadd8735db6d323495ef325a2f79b2e 438 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 435 39.536 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 ALIDE2_RS05370 adadd8735db6d323495ef325a2f79b2e 438 PANTHER PTHR11778 1 436 6.5E-210 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 ALIDE2_RS05370 adadd8735db6d323495ef325a2f79b2e 438 SUPERFAMILY SSF46589 1 117 4.71E-24 T 19-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 ALIDE2_RS05370 adadd8735db6d323495ef325a2f79b2e 438 PIRSF PIRSF001529 1 438 4.7E-177 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 ALIDE2_RS05370 adadd8735db6d323495ef325a2f79b2e 438 Gene3D G3DSA:3.30.930.10 110 434 1.6E-143 T 19-04-2016 ALIDE2_RS05370 adadd8735db6d323495ef325a2f79b2e 438 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 430 8.4E-162 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 ALIDE2_RS05370 adadd8735db6d323495ef325a2f79b2e 438 SUPERFAMILY SSF55681 121 431 9.12E-101 T 19-04-2016 ALIDE2_RS05370 adadd8735db6d323495ef325a2f79b2e 438 Gene3D G3DSA:1.10.287.40 1 109 1.9E-19 T 19-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 ALIDE2_RS05370 adadd8735db6d323495ef325a2f79b2e 438 PRINTS PR00981 Seryl-tRNA synthetase signature 365 381 8.2E-33 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 ALIDE2_RS05370 adadd8735db6d323495ef325a2f79b2e 438 PRINTS PR00981 Seryl-tRNA synthetase signature 278 290 8.2E-33 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 ALIDE2_RS05370 adadd8735db6d323495ef325a2f79b2e 438 PRINTS PR00981 Seryl-tRNA synthetase signature 330 343 8.2E-33 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 ALIDE2_RS05370 adadd8735db6d323495ef325a2f79b2e 438 PRINTS PR00981 Seryl-tRNA synthetase signature 290 303 8.2E-33 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 ALIDE2_RS05370 adadd8735db6d323495ef325a2f79b2e 438 PRINTS PR00981 Seryl-tRNA synthetase signature 347 363 8.2E-33 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 ALIDE2_RS23105 b4b3556780e66d381a14282d6c5530e8 460 Gene3D G3DSA:3.40.50.80 335 457 1.1E-15 T 19-04-2016 ALIDE2_RS23105 b4b3556780e66d381a14282d6c5530e8 460 Gene3D G3DSA:2.40.30.10 245 329 1.2E-11 T 19-04-2016 ALIDE2_RS23105 b4b3556780e66d381a14282d6c5530e8 460 SUPERFAMILY SSF52343 325 459 9.17E-16 T 19-04-2016 ALIDE2_RS23105 b4b3556780e66d381a14282d6c5530e8 460 SUPERFAMILY SSF63380 247 329 1.34E-13 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ALIDE2_RS23105 b4b3556780e66d381a14282d6c5530e8 460 Pfam PF08022 FAD-binding domain 247 327 9.0E-6 T 19-04-2016 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 ALIDE2_RS23105 b4b3556780e66d381a14282d6c5530e8 460 PANTHER PTHR11972 51 459 6.1E-55 T 19-04-2016 ALIDE2_RS23105 b4b3556780e66d381a14282d6c5530e8 460 PRINTS PR00410 Phenol hydroxylase reductase family signature 340 359 3.5E-5 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS23105 b4b3556780e66d381a14282d6c5530e8 460 PRINTS PR00410 Phenol hydroxylase reductase family signature 427 435 3.5E-5 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS23105 b4b3556780e66d381a14282d6c5530e8 460 PRINTS PR00410 Phenol hydroxylase reductase family signature 324 333 3.5E-5 T 19-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ALIDE2_RS23105 b4b3556780e66d381a14282d6c5530e8 460 Pfam PF01794 Ferric reductase like transmembrane component 52 180 2.6E-16 T 19-04-2016 IPR013130 Ferric reductase transmembrane component-like domain ALIDE2_RS23105 b4b3556780e66d381a14282d6c5530e8 460 PANTHER PTHR11972:SF23 51 459 6.1E-55 T 19-04-2016 ALIDE2_RS12840 04639fe1fca53b3d1ce75be843b86c70 251 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS12840 04639fe1fca53b3d1ce75be843b86c70 251 Pfam PF00005 ABC transporter 34 182 2.9E-29 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS12840 04639fe1fca53b3d1ce75be843b86c70 251 PANTHER PTHR24220 16 237 2.0E-112 T 19-04-2016 ALIDE2_RS12840 04639fe1fca53b3d1ce75be843b86c70 251 Gene3D G3DSA:3.40.50.300 12 233 1.4E-67 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12840 04639fe1fca53b3d1ce75be843b86c70 251 SMART SM00382 43 233 6.7E-12 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS12840 04639fe1fca53b3d1ce75be843b86c70 251 PANTHER PTHR24220:SF578 16 237 2.0E-112 T 19-04-2016 ALIDE2_RS12840 04639fe1fca53b3d1ce75be843b86c70 251 SUPERFAMILY SSF52540 14 236 1.69E-71 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15600 f17e4bd04e7cebe22a43e07ea5e19cbb 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS15600 f17e4bd04e7cebe22a43e07ea5e19cbb 477 Gene3D G3DSA:3.40.605.10 4 259 9.0E-92 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS15600 f17e4bd04e7cebe22a43e07ea5e19cbb 477 Gene3D G3DSA:3.40.309.10 260 448 1.7E-57 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS15600 f17e4bd04e7cebe22a43e07ea5e19cbb 477 PANTHER PTHR11699 4 476 2.0E-192 T 19-04-2016 ALIDE2_RS15600 f17e4bd04e7cebe22a43e07ea5e19cbb 477 SUPERFAMILY SSF53720 4 476 1.7E-151 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS15600 f17e4bd04e7cebe22a43e07ea5e19cbb 477 Pfam PF00171 Aldehyde dehydrogenase family 13 472 1.3E-155 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS15600 f17e4bd04e7cebe22a43e07ea5e19cbb 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS13625 e3279f637e00221b3178d43437f3e174 424 Pfam PF02321 Outer membrane efflux protein 36 219 1.5E-14 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS13625 e3279f637e00221b3178d43437f3e174 424 Pfam PF02321 Outer membrane efflux protein 246 420 2.2E-20 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS13625 e3279f637e00221b3178d43437f3e174 424 PANTHER PTHR30203 33 421 2.8E-41 T 19-04-2016 ALIDE2_RS13625 e3279f637e00221b3178d43437f3e174 424 SUPERFAMILY SSF56954 1 421 5.62E-68 T 19-04-2016 ALIDE2_RS13625 e3279f637e00221b3178d43437f3e174 424 Gene3D G3DSA:1.20.1600.10 33 421 3.6E-50 T 19-04-2016 ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 SUPERFAMILY SSF55785 21 133 4.54E-20 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 SUPERFAMILY SSF55785 128 254 6.0E-23 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 SMART SM00091 143 209 2.3E-5 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 SMART SM00091 16 82 8.6E-6 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 Gene3D G3DSA:3.30.450.20 131 254 1.3E-21 T 19-04-2016 ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 263 3.0E-10 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 136 1.4E-16 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 SMART SM00267 256 428 9.1E-61 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 Pfam PF00990 Diguanylate cyclase, GGDEF domain 267 423 3.2E-44 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 Gene3D G3DSA:3.30.450.20 18 130 7.8E-20 T 19-04-2016 ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 SUPERFAMILY SSF55073 272 427 1.33E-49 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 Gene3D G3DSA:3.30.70.270 269 426 3.1E-53 T 19-04-2016 ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 PANTHER PTHR24423 18 267 2.6E-33 T 19-04-2016 ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 263 426 3.6E-48 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 Pfam PF08448 PAS fold 149 258 3.8E-18 T 19-04-2016 IPR013656 PAS fold-4 ALIDE2_RS04100 1c3400190ca2913f96dc9589cc273d49 431 Pfam PF08448 PAS fold 22 133 4.1E-16 T 19-04-2016 IPR013656 PAS fold-4 ALIDE2_RS03875 4a145399545b9cfcee3c84492f04b09b 284 PANTHER PTHR30606 4 280 5.7E-38 T 19-04-2016 ALIDE2_RS03875 4a145399545b9cfcee3c84492f04b09b 284 PIRSF PIRSF026649 2 281 1.1E-63 T 19-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ALIDE2_RS03875 4a145399545b9cfcee3c84492f04b09b 284 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 271 7.5E-28 T 19-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ALIDE2_RS14105 3ca747acdca1bcc5e4df92e216cb5e3f 75 Pfam PF10636 Hemin uptake protein hemP 40 75 1.7E-16 T 19-04-2016 IPR019600 Hemin uptake protein HemP ALIDE2_RS14105 3ca747acdca1bcc5e4df92e216cb5e3f 75 Gene3D G3DSA:2.10.70.10 39 75 1.3E-17 T 19-04-2016 ALIDE2_RS14080 38fc22628e6d7f7de85eec7ecbed0683 93 Pfam PF02201 SWIB/MDM2 domain 20 92 1.3E-27 T 19-04-2016 IPR003121 SWIB/MDM2 domain GO:0005515 ALIDE2_RS14080 38fc22628e6d7f7de85eec7ecbed0683 93 Gene3D G3DSA:1.10.245.10 10 92 2.1E-30 T 19-04-2016 IPR003121 SWIB/MDM2 domain GO:0005515 ALIDE2_RS14080 38fc22628e6d7f7de85eec7ecbed0683 93 SMART SM00151 18 93 2.8E-28 T 19-04-2016 IPR019835 SWIB domain ALIDE2_RS14080 38fc22628e6d7f7de85eec7ecbed0683 93 SUPERFAMILY SSF47592 10 92 4.8E-26 T 19-04-2016 IPR003121 SWIB/MDM2 domain GO:0005515 ALIDE2_RS14080 38fc22628e6d7f7de85eec7ecbed0683 93 PANTHER PTHR13844 18 91 9.9E-26 T 19-04-2016 ALIDE2_RS19575 37e78387bccecbbc5052a16d51946e9e 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 58 8.9E-17 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS19575 37e78387bccecbbc5052a16d51946e9e 307 PANTHER PTHR30537 3 296 3.6E-74 T 19-04-2016 ALIDE2_RS19575 37e78387bccecbbc5052a16d51946e9e 307 Gene3D G3DSA:3.40.190.10 88 173 2.5E-15 T 19-04-2016 ALIDE2_RS19575 37e78387bccecbbc5052a16d51946e9e 307 Pfam PF03466 LysR substrate binding domain 84 293 3.2E-35 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS19575 37e78387bccecbbc5052a16d51946e9e 307 SUPERFAMILY SSF53850 83 296 8.32E-37 T 19-04-2016 ALIDE2_RS19575 37e78387bccecbbc5052a16d51946e9e 307 Gene3D G3DSA:3.40.190.10 174 259 2.1E-19 T 19-04-2016 ALIDE2_RS19575 37e78387bccecbbc5052a16d51946e9e 307 Gene3D G3DSA:1.10.10.10 3 83 7.8E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS19575 37e78387bccecbbc5052a16d51946e9e 307 SUPERFAMILY SSF46785 3 84 8.09E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS19575 37e78387bccecbbc5052a16d51946e9e 307 PANTHER PTHR30537:SF5 3 296 3.6E-74 T 19-04-2016 ALIDE2_RS20330 e25d137e00eb92a02e7261773bd75b75 168 SUPERFAMILY SSF46785 6 152 2.54E-29 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20330 e25d137e00eb92a02e7261773bd75b75 168 PANTHER PTHR33164 12 162 1.4E-21 T 19-04-2016 ALIDE2_RS20330 e25d137e00eb92a02e7261773bd75b75 168 ProSitePatterns PS01117 MarR-type HTH domain signature. 76 110 - T 19-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site ALIDE2_RS20330 e25d137e00eb92a02e7261773bd75b75 168 Gene3D G3DSA:1.10.10.10 4 154 3.8E-37 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20330 e25d137e00eb92a02e7261773bd75b75 168 Pfam PF12802 MarR family 42 101 5.1E-13 T 19-04-2016 ALIDE2_RS20330 e25d137e00eb92a02e7261773bd75b75 168 SMART SM00347 36 138 7.1E-24 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ALIDE2_RS05590 4f1f5def3ceacca9189193045cef71ba 479 Gene3D G3DSA:1.20.210.10 10 468 8.3E-73 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS05590 4f1f5def3ceacca9189193045cef71ba 479 SUPERFAMILY SSF81442 11 469 9.03E-127 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS05590 4f1f5def3ceacca9189193045cef71ba 479 PANTHER PTHR10422 2 465 1.3E-291 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS05590 4f1f5def3ceacca9189193045cef71ba 479 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 19-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS05590 4f1f5def3ceacca9189193045cef71ba 479 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 8.4E-115 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS05590 4f1f5def3ceacca9189193045cef71ba 479 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 475 9.4E-237 T 19-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS05590 4f1f5def3ceacca9189193045cef71ba 479 PANTHER PTHR10422:SF21 2 465 1.3E-291 T 19-04-2016 ALIDE2_RS06180 0341bf0782d9a2ee84b4fd26a188a7a1 171 Gene3D G3DSA:3.30.1330.60 52 168 4.5E-32 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS06180 0341bf0782d9a2ee84b4fd26a188a7a1 171 Pfam PF00691 OmpA family 67 162 2.0E-19 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS06180 0341bf0782d9a2ee84b4fd26a188a7a1 171 SUPERFAMILY SSF103088 54 168 4.19E-31 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS06180 0341bf0782d9a2ee84b4fd26a188a7a1 171 PANTHER PTHR30128 52 168 1.3E-32 T 19-04-2016 ALIDE2_RS06180 0341bf0782d9a2ee84b4fd26a188a7a1 171 PRINTS PR01021 OMPA domain signature 113 129 7.1E-11 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ALIDE2_RS06180 0341bf0782d9a2ee84b4fd26a188a7a1 171 PRINTS PR01021 OMPA domain signature 98 113 7.1E-11 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ALIDE2_RS06180 0341bf0782d9a2ee84b4fd26a188a7a1 171 PRINTS PR01021 OMPA domain signature 68 90 7.1E-11 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ALIDE2_RS12375 b5216b56910f3920784510998a8685da 510 Gene3D G3DSA:3.90.226.10 254 510 8.7E-100 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS12375 b5216b56910f3920784510998a8685da 510 PANTHER PTHR22855:SF40 1 510 0.0 T 19-04-2016 ALIDE2_RS12375 b5216b56910f3920784510998a8685da 510 Pfam PF01039 Carboxyl transferase domain 27 508 9.9E-198 T 19-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS12375 b5216b56910f3920784510998a8685da 510 SUPERFAMILY SSF52096 3 249 3.37E-81 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS12375 b5216b56910f3920784510998a8685da 510 SUPERFAMILY SSF52096 223 510 1.4E-88 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS12375 b5216b56910f3920784510998a8685da 510 PANTHER PTHR22855 1 510 0.0 T 19-04-2016 ALIDE2_RS12375 b5216b56910f3920784510998a8685da 510 Gene3D G3DSA:3.90.226.10 3 253 3.3E-85 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS20810 6b4b4daea5150b2dbdbc9689ba3bf143 113 Pfam PF04347 Flagellar biosynthesis protein, FliO 20 97 6.6E-16 T 19-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 ALIDE2_RS02925 6d8872cb555f4094142e237c49ffd7e2 295 SUPERFAMILY SSF54631 58 197 1.39E-30 T 19-04-2016 ALIDE2_RS02925 6d8872cb555f4094142e237c49ffd7e2 295 PANTHER PTHR22777 32 290 1.7E-89 T 19-04-2016 ALIDE2_RS02925 6d8872cb555f4094142e237c49ffd7e2 295 Gene3D G3DSA:3.30.465.10 193 283 4.1E-23 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ALIDE2_RS02925 6d8872cb555f4094142e237c49ffd7e2 295 Pfam PF00571 CBS domain 77 124 3.4E-6 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS02925 6d8872cb555f4094142e237c49ffd7e2 295 Pfam PF00571 CBS domain 137 186 1.3E-4 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS02925 6d8872cb555f4094142e237c49ffd7e2 295 Gene3D G3DSA:3.10.580.10 55 192 3.1E-18 T 19-04-2016 ALIDE2_RS02925 6d8872cb555f4094142e237c49ffd7e2 295 Pfam PF03471 Transporter associated domain 206 283 5.9E-17 T 19-04-2016 IPR005170 Transporter-associated domain ALIDE2_RS02925 6d8872cb555f4094142e237c49ffd7e2 295 SUPERFAMILY SSF56176 201 289 6.27E-19 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS02925 6d8872cb555f4094142e237c49ffd7e2 295 SMART SM01091 203 285 7.3E-26 T 19-04-2016 IPR005170 Transporter-associated domain ALIDE2_RS04175 374a7ce82c1f53a2dda41a050f82904b 510 SUPERFAMILY SSF53756 158 218 1.5E-60 T 19-04-2016 ALIDE2_RS04175 374a7ce82c1f53a2dda41a050f82904b 510 SUPERFAMILY SSF53756 246 500 1.5E-60 T 19-04-2016 ALIDE2_RS04175 374a7ce82c1f53a2dda41a050f82904b 510 SUPERFAMILY SSF53756 13 56 1.5E-60 T 19-04-2016 ALIDE2_RS04175 374a7ce82c1f53a2dda41a050f82904b 510 PANTHER PTHR12526 249 507 1.6E-41 T 19-04-2016 ALIDE2_RS04175 374a7ce82c1f53a2dda41a050f82904b 510 PANTHER PTHR12526 157 231 1.6E-41 T 19-04-2016 ALIDE2_RS04175 374a7ce82c1f53a2dda41a050f82904b 510 Gene3D G3DSA:3.40.50.2000 288 480 2.2E-20 T 19-04-2016 ALIDE2_RS04175 374a7ce82c1f53a2dda41a050f82904b 510 Pfam PF11997 Domain of unknown function (DUF3492) 9 290 3.6E-104 T 19-04-2016 IPR022622 Domain of unknown function DUF3492 ALIDE2_RS04175 374a7ce82c1f53a2dda41a050f82904b 510 Pfam PF00534 Glycosyl transferases group 1 314 473 4.2E-22 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 ALIDE2_RS00860 c7bd403a973d8ae7c6b677a91d536b92 385 SUPERFAMILY SSF47203 228 380 1.61E-54 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00860 c7bd403a973d8ae7c6b677a91d536b92 385 Gene3D G3DSA:1.20.140.10 217 383 7.2E-66 T 19-04-2016 ALIDE2_RS00860 c7bd403a973d8ae7c6b677a91d536b92 385 PANTHER PTHR10909 9 383 4.2E-146 T 19-04-2016 ALIDE2_RS00860 c7bd403a973d8ae7c6b677a91d536b92 385 SUPERFAMILY SSF56645 9 242 1.07E-77 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS00860 c7bd403a973d8ae7c6b677a91d536b92 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 3.7E-48 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS00860 c7bd403a973d8ae7c6b677a91d536b92 385 Gene3D G3DSA:2.40.110.10 121 216 2.7E-40 T 19-04-2016 ALIDE2_RS00860 c7bd403a973d8ae7c6b677a91d536b92 385 PIRSF PIRSF016578 4 376 4.8E-22 T 19-04-2016 ALIDE2_RS00860 c7bd403a973d8ae7c6b677a91d536b92 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 117 6.6E-27 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS00860 c7bd403a973d8ae7c6b677a91d536b92 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS00860 c7bd403a973d8ae7c6b677a91d536b92 385 PANTHER PTHR10909:SF305 9 383 4.2E-146 T 19-04-2016 ALIDE2_RS00860 c7bd403a973d8ae7c6b677a91d536b92 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 1.7E-29 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS00860 c7bd403a973d8ae7c6b677a91d536b92 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS00860 c7bd403a973d8ae7c6b677a91d536b92 385 Gene3D G3DSA:1.10.540.10 7 119 9.9E-31 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS20600 c6fb8987c3b17a30f234778266ffebf5 462 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 1.6E-13 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS20600 c6fb8987c3b17a30f234778266ffebf5 462 Gene3D G3DSA:3.40.640.10 140 356 3.3E-59 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS20600 c6fb8987c3b17a30f234778266ffebf5 462 PANTHER PTHR11751:SF386 82 461 2.5E-86 T 19-04-2016 ALIDE2_RS20600 c6fb8987c3b17a30f234778266ffebf5 462 Pfam PF00155 Aminotransferase class I and II 136 459 4.2E-34 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ALIDE2_RS20600 c6fb8987c3b17a30f234778266ffebf5 462 PANTHER PTHR11751 82 461 2.5E-86 T 19-04-2016 ALIDE2_RS20600 c6fb8987c3b17a30f234778266ffebf5 462 SUPERFAMILY SSF53383 100 461 2.36E-74 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS20600 c6fb8987c3b17a30f234778266ffebf5 462 SMART SM00345 12 71 6.3E-14 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS20600 c6fb8987c3b17a30f234778266ffebf5 462 SUPERFAMILY SSF46785 5 75 2.38E-16 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20600 c6fb8987c3b17a30f234778266ffebf5 462 Gene3D G3DSA:1.10.10.10 5 72 8.4E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08190 3dbc43f82d380960544771df228d667b 75 PANTHER PTHR33279 1 75 1.1E-20 T 19-04-2016 ALIDE2_RS08190 3dbc43f82d380960544771df228d667b 75 Gene3D G3DSA:3.30.110.40 1 74 2.9E-29 T 19-04-2016 IPR001455 TusA-like domain ALIDE2_RS08190 3dbc43f82d380960544771df228d667b 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 19-04-2016 IPR001455 TusA-like domain ALIDE2_RS08190 3dbc43f82d380960544771df228d667b 75 Pfam PF01206 Sulfurtransferase TusA 5 73 6.4E-23 T 19-04-2016 IPR001455 TusA-like domain ALIDE2_RS08190 3dbc43f82d380960544771df228d667b 75 SUPERFAMILY SSF64307 3 74 6.28E-24 T 19-04-2016 IPR001455 TusA-like domain ALIDE2_RS04945 b7fa9bc3f0dc2e0426209bf2754b8723 104 Pfam PF04972 BON domain 36 104 1.6E-20 T 19-04-2016 IPR007055 BON domain ALIDE2_RS04945 b7fa9bc3f0dc2e0426209bf2754b8723 104 SMART SM00749 41 104 2.2E-6 T 19-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria ALIDE2_RS04945 b7fa9bc3f0dc2e0426209bf2754b8723 104 PANTHER PTHR34606 6 103 3.9E-15 T 19-04-2016 ALIDE2_RS12820 645a6f697811bb79ae2520555529e8ac 363 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 22 355 9.5E-111 T 19-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 ALIDE2_RS12820 645a6f697811bb79ae2520555529e8ac 363 PANTHER PTHR30106:SF2 20 362 1.9E-126 T 19-04-2016 ALIDE2_RS12820 645a6f697811bb79ae2520555529e8ac 363 PANTHER PTHR30106 20 362 1.9E-126 T 19-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 ALIDE2_RS12820 645a6f697811bb79ae2520555529e8ac 363 Pfam PF03601 Conserved hypothetical protein 698 23 341 5.9E-106 T 19-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 ALIDE2_RS17760 4057681746cf5970d595aee85c0ef750 356 PANTHER PTHR10314:SF126 17 339 8.8E-177 T 19-04-2016 ALIDE2_RS17760 4057681746cf5970d595aee85c0ef750 356 Gene3D G3DSA:3.40.50.1100 150 339 3.5E-36 T 19-04-2016 ALIDE2_RS17760 4057681746cf5970d595aee85c0ef750 356 Gene3D G3DSA:3.40.50.1100 55 149 2.3E-24 T 19-04-2016 ALIDE2_RS17760 4057681746cf5970d595aee85c0ef750 356 PANTHER PTHR10314 17 339 8.8E-177 T 19-04-2016 ALIDE2_RS17760 4057681746cf5970d595aee85c0ef750 356 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 36 322 9.6E-52 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS17760 4057681746cf5970d595aee85c0ef750 356 SUPERFAMILY SSF53686 29 340 6.16E-70 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS03240 12abce7a15bf5c96e5549920af3eee1a 223 Gene3D G3DSA:1.10.3720.10 19 219 7.8E-42 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS03240 12abce7a15bf5c96e5549920af3eee1a 223 PANTHER PTHR30614 1 223 3.2E-90 T 19-04-2016 ALIDE2_RS03240 12abce7a15bf5c96e5549920af3eee1a 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 18 114 4.1E-23 T 19-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 ALIDE2_RS03240 12abce7a15bf5c96e5549920af3eee1a 223 PANTHER PTHR30614:SF1 1 223 3.2E-90 T 19-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 ALIDE2_RS03240 12abce7a15bf5c96e5549920af3eee1a 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 219 4.7E-15 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS03240 12abce7a15bf5c96e5549920af3eee1a 223 SUPERFAMILY SSF161098 17 212 2.09E-39 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS10805 c0af4abb15759c1753707398a93ad29c 104 Pfam PF05284 Protein of unknown function (DUF736) 3 98 1.1E-34 T 19-04-2016 IPR007948 Protein of unknown function DUF736 ALIDE2_RS06365 1168eefa0df10fe3b4eac7d0c7bb523e 257 SUPERFAMILY SSF50249 6 83 3.08E-11 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS06365 1168eefa0df10fe3b4eac7d0c7bb523e 257 PANTHER PTHR33991 5 254 2.4E-27 T 19-04-2016 ALIDE2_RS06365 1168eefa0df10fe3b4eac7d0c7bb523e 257 Pfam PF02565 Recombination protein O C terminal 91 244 4.4E-14 T 19-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ALIDE2_RS06365 1168eefa0df10fe3b4eac7d0c7bb523e 257 Pfam PF11967 Recombination protein O N terminal 7 85 3.6E-18 T 19-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal ALIDE2_RS06365 1168eefa0df10fe3b4eac7d0c7bb523e 257 SUPERFAMILY SSF57863 95 208 3.66E-7 T 19-04-2016 ALIDE2_RS06365 1168eefa0df10fe3b4eac7d0c7bb523e 257 Gene3D G3DSA:2.40.50.140 5 56 3.2E-5 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS06365 1168eefa0df10fe3b4eac7d0c7bb523e 257 Hamap MF_00201 DNA repair protein RecO [recO]. 5 254 21.665 T 19-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ALIDE2_RS06365 1168eefa0df10fe3b4eac7d0c7bb523e 257 TIGRFAM TIGR00613 reco: DNA repair protein RecO 13 165 1.9E-18 T 19-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ALIDE2_RS14820 a16f309f43c64fc9839a4da50bbbf9ee 326 PANTHER PTHR30238:SF0 11 326 3.5E-147 T 19-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 ALIDE2_RS14820 a16f309f43c64fc9839a4da50bbbf9ee 326 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 13 318 1.8E-122 T 19-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 ALIDE2_RS14820 a16f309f43c64fc9839a4da50bbbf9ee 326 PANTHER PTHR30238 11 326 3.5E-147 T 19-04-2016 ALIDE2_RS14820 a16f309f43c64fc9839a4da50bbbf9ee 326 Pfam PF03741 Integral membrane protein TerC family 78 286 4.0E-57 T 19-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 ALIDE2_RS02850 5adcf89a78d394c350eaaaae2eba1876 256 Gene3D G3DSA:3.60.21.10 146 229 4.9E-17 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS02850 5adcf89a78d394c350eaaaae2eba1876 256 Gene3D G3DSA:3.60.21.10 1 62 4.9E-17 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS02850 5adcf89a78d394c350eaaaae2eba1876 256 Pfam PF00149 Calcineurin-like phosphoesterase 18 217 2.2E-9 T 19-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 ALIDE2_RS02850 5adcf89a78d394c350eaaaae2eba1876 256 SUPERFAMILY SSF56300 1 103 1.9E-31 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS02850 5adcf89a78d394c350eaaaae2eba1876 256 SUPERFAMILY SSF56300 143 232 1.9E-31 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS02850 5adcf89a78d394c350eaaaae2eba1876 256 PANTHER PTHR37844 1 256 2.2E-36 T 19-04-2016 ALIDE2_RS17175 d79b82123f47acbae4a504df68229355 453 PANTHER PTHR22939 150 174 1.9E-61 T 19-04-2016 ALIDE2_RS17175 d79b82123f47acbae4a504df68229355 453 PANTHER PTHR22939 221 453 1.9E-61 T 19-04-2016 ALIDE2_RS17175 d79b82123f47acbae4a504df68229355 453 SMART SM00228 212 282 0.0051 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS17175 d79b82123f47acbae4a504df68229355 453 Pfam PF02163 Peptidase family M50 7 438 6.5E-72 T 19-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 ALIDE2_RS17175 d79b82123f47acbae4a504df68229355 453 SUPERFAMILY SSF50156 200 295 1.18E-11 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS17175 d79b82123f47acbae4a504df68229355 453 Gene3D G3DSA:2.30.42.10 202 296 4.1E-14 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS17175 d79b82123f47acbae4a504df68229355 453 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 452 1.7E-97 T 19-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 ALIDE2_RS17175 d79b82123f47acbae4a504df68229355 453 Gene3D G3DSA:2.30.42.10 94 187 1.7E-7 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS17175 d79b82123f47acbae4a504df68229355 453 PANTHER PTHR22939:SF78 150 174 1.9E-61 T 19-04-2016 ALIDE2_RS17175 d79b82123f47acbae4a504df68229355 453 PANTHER PTHR22939:SF78 221 453 1.9E-61 T 19-04-2016 ALIDE2_RS20870 821b7c9db5d751ed24b91bbeade2148b 146 TIGRFAM TIGR00208 fliS: flagellar protein FliS 8 131 1.6E-27 T 19-04-2016 IPR003713 Flagellar protein FliS GO:0044780 ALIDE2_RS20870 821b7c9db5d751ed24b91bbeade2148b 146 SUPERFAMILY SSF101116 12 130 1.57E-29 T 19-04-2016 IPR003713 Flagellar protein FliS GO:0044780 ALIDE2_RS20870 821b7c9db5d751ed24b91bbeade2148b 146 PANTHER PTHR34773 2 146 2.5E-27 T 19-04-2016 ALIDE2_RS20870 821b7c9db5d751ed24b91bbeade2148b 146 Gene3D G3DSA:1.20.120.340 11 132 2.4E-32 T 19-04-2016 IPR003713 Flagellar protein FliS GO:0044780 ALIDE2_RS20870 821b7c9db5d751ed24b91bbeade2148b 146 PIRSF PIRSF039090 4 139 7.0E-36 T 19-04-2016 IPR003713 Flagellar protein FliS GO:0044780 ALIDE2_RS20870 821b7c9db5d751ed24b91bbeade2148b 146 Pfam PF02561 Flagellar protein FliS 11 128 3.9E-31 T 19-04-2016 IPR003713 Flagellar protein FliS GO:0044780 ALIDE2_RS11585 ebc99311f1f567b23adaac026380f35f 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 1.5E-73 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS11585 ebc99311f1f567b23adaac026380f35f 209 Gene3D G3DSA:3.40.50.2020 3 209 2.2E-81 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS11585 ebc99311f1f567b23adaac026380f35f 209 PANTHER PTHR10285 4 198 2.3E-95 T 19-04-2016 ALIDE2_RS11585 ebc99311f1f567b23adaac026380f35f 209 SUPERFAMILY SSF53271 3 207 7.74E-72 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS11585 ebc99311f1f567b23adaac026380f35f 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 45.417 T 19-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 ALIDE2_RS11585 ebc99311f1f567b23adaac026380f35f 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 8.3E-86 T 19-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 ALIDE2_RS22980 2c900d2be9d1abc5334ffcf7be7123f4 478 PANTHER PTHR11632 2 460 9.9E-250 T 19-04-2016 ALIDE2_RS22980 2c900d2be9d1abc5334ffcf7be7123f4 478 Pfam PF00890 FAD binding domain 3 432 3.8E-31 T 19-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain ALIDE2_RS22980 2c900d2be9d1abc5334ffcf7be7123f4 478 Gene3D G3DSA:3.90.700.10 254 393 1.9E-19 T 19-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain ALIDE2_RS22980 2c900d2be9d1abc5334ffcf7be7123f4 478 TIGRFAM TIGR02485 CobZ_N-term: precorrin 3B synthase CobZ 2 460 1.8E-216 T 19-04-2016 IPR012831 Precorrin 3B synthase CobZ ALIDE2_RS22980 2c900d2be9d1abc5334ffcf7be7123f4 478 PANTHER PTHR11632:SF47 2 460 9.9E-250 T 19-04-2016 ALIDE2_RS22980 2c900d2be9d1abc5334ffcf7be7123f4 478 Gene3D G3DSA:3.50.50.60 397 457 3.3E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22980 2c900d2be9d1abc5334ffcf7be7123f4 478 Gene3D G3DSA:3.50.50.60 2 234 3.3E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22980 2c900d2be9d1abc5334ffcf7be7123f4 478 SUPERFAMILY SSF51905 3 190 2.7E-34 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22980 2c900d2be9d1abc5334ffcf7be7123f4 478 SUPERFAMILY SSF51905 395 461 2.7E-34 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS22980 2c900d2be9d1abc5334ffcf7be7123f4 478 SUPERFAMILY SSF56425 264 401 9.77E-24 T 19-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain ALIDE2_RS14755 437506537c9f553ad9a648abcf3a9e0d 249 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 131 233 5.0E-30 T 19-04-2016 IPR018754 Protein of unknown function DUF2285 ALIDE2_RS17295 b4384ecc60a63e95fa437acc5eb4e150 568 PANTHER PTHR24031:SF0 1 516 2.8E-197 T 19-04-2016 ALIDE2_RS17295 b4384ecc60a63e95fa437acc5eb4e150 568 SUPERFAMILY SSF52540 76 362 1.22E-74 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17295 b4384ecc60a63e95fa437acc5eb4e150 568 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 19-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ALIDE2_RS17295 b4384ecc60a63e95fa437acc5eb4e150 568 SMART SM00487 20 225 3.0E-61 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS17295 b4384ecc60a63e95fa437acc5eb4e150 568 Gene3D G3DSA:3.40.50.300 1 214 4.6E-81 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17295 b4384ecc60a63e95fa437acc5eb4e150 568 Gene3D G3DSA:3.40.50.300 215 372 3.3E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17295 b4384ecc60a63e95fa437acc5eb4e150 568 PANTHER PTHR24031 1 516 2.8E-197 T 19-04-2016 ALIDE2_RS17295 b4384ecc60a63e95fa437acc5eb4e150 568 Pfam PF00270 DEAD/DEAH box helicase 25 198 7.3E-49 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ALIDE2_RS17295 b4384ecc60a63e95fa437acc5eb4e150 568 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 564 49.463 T 19-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 ALIDE2_RS17295 b4384ecc60a63e95fa437acc5eb4e150 568 SMART SM00490 261 342 1.5E-31 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS17295 b4384ecc60a63e95fa437acc5eb4e150 568 Pfam PF00271 Helicase conserved C-terminal domain 234 342 6.6E-26 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS17230 48f34f8e512c9a4dba98f6995356fb57 277 Gene3D G3DSA:3.20.20.60 10 235 2.2E-62 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS17230 48f34f8e512c9a4dba98f6995356fb57 277 Pfam PF13714 Phosphoenolpyruvate phosphomutase 16 252 4.9E-69 T 19-04-2016 ALIDE2_RS17230 48f34f8e512c9a4dba98f6995356fb57 277 PANTHER PTHR21631 8 259 2.9E-73 T 19-04-2016 ALIDE2_RS17230 48f34f8e512c9a4dba98f6995356fb57 277 SUPERFAMILY SSF51621 11 272 9.42E-63 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS17230 48f34f8e512c9a4dba98f6995356fb57 277 PANTHER PTHR21631:SF18 8 259 2.9E-73 T 19-04-2016 ALIDE2_RS03345 9367c416cc64f193a5dda235de211cca 111 Pfam PF13591 MerR HTH family regulatory protein 22 104 1.8E-10 T 19-04-2016 ALIDE2_RS05340 3e4da46fc519b328fcfeccdec7923ae2 386 Pfam PF13449 Esterase-like activity of phytase 52 357 2.3E-72 T 19-04-2016 IPR027372 Phytase-like domain ALIDE2_RS05340 3e4da46fc519b328fcfeccdec7923ae2 386 PANTHER PTHR41519 31 373 5.8E-28 T 19-04-2016 ALIDE2_RS05340 3e4da46fc519b328fcfeccdec7923ae2 386 PANTHER PTHR41519:SF1 31 373 5.8E-28 T 19-04-2016 ALIDE2_RS14930 74429172923be06f86e7c7d32352fca0 155 Gene3D G3DSA:3.40.190.10 81 148 6.8E-13 T 19-04-2016 ALIDE2_RS14930 74429172923be06f86e7c7d32352fca0 155 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.3E-23 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS14930 74429172923be06f86e7c7d32352fca0 155 Pfam PF03466 LysR substrate binding domain 87 150 8.0E-11 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS14930 74429172923be06f86e7c7d32352fca0 155 PANTHER PTHR30346:SF6 1 147 9.6E-54 T 19-04-2016 ALIDE2_RS14930 74429172923be06f86e7c7d32352fca0 155 PANTHER PTHR30346 1 147 9.6E-54 T 19-04-2016 ALIDE2_RS14930 74429172923be06f86e7c7d32352fca0 155 Gene3D G3DSA:1.10.10.10 1 80 8.5E-31 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14930 74429172923be06f86e7c7d32352fca0 155 SUPERFAMILY SSF46785 1 86 2.67E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14930 74429172923be06f86e7c7d32352fca0 155 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS14930 74429172923be06f86e7c7d32352fca0 155 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS14930 74429172923be06f86e7c7d32352fca0 155 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS14930 74429172923be06f86e7c7d32352fca0 155 SUPERFAMILY SSF53850 88 151 3.8E-9 T 19-04-2016 ALIDE2_RS18440 32de43d52403703e02d2d72c7551fe4b 165 Pfam PF01252 Signal peptidase (SPase) II 19 157 3.6E-37 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS18440 32de43d52403703e02d2d72c7551fe4b 165 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 164 16.693 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS18440 32de43d52403703e02d2d72c7551fe4b 165 ProSitePatterns PS00855 Signal peptidases II signature. 106 118 - T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS18440 32de43d52403703e02d2d72c7551fe4b 165 PANTHER PTHR33695 9 165 7.0E-48 T 19-04-2016 ALIDE2_RS18440 32de43d52403703e02d2d72c7551fe4b 165 TIGRFAM TIGR00077 lspA: signal peptidase II 17 163 4.3E-40 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS18440 32de43d52403703e02d2d72c7551fe4b 165 PANTHER PTHR33695:SF1 9 165 7.0E-48 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS18440 32de43d52403703e02d2d72c7551fe4b 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 103 118 7.8E-18 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS18440 32de43d52403703e02d2d72c7551fe4b 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 56 64 7.8E-18 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS18440 32de43d52403703e02d2d72c7551fe4b 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 139 155 7.8E-18 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS02805 985eb14525df2261eacbae069a084334 463 SUPERFAMILY SSF53756 2 456 4.4E-143 T 19-04-2016 ALIDE2_RS02805 985eb14525df2261eacbae069a084334 463 Gene3D G3DSA:3.40.50.2000 241 439 7.4E-76 T 19-04-2016 ALIDE2_RS02805 985eb14525df2261eacbae069a084334 463 Gene3D G3DSA:3.40.50.2000 1 240 2.2E-65 T 19-04-2016 ALIDE2_RS02805 985eb14525df2261eacbae069a084334 463 PANTHER PTHR10788 1 462 2.1E-165 T 19-04-2016 ALIDE2_RS02805 985eb14525df2261eacbae069a084334 463 PANTHER PTHR10788:SF6 1 462 2.1E-165 T 19-04-2016 ALIDE2_RS02805 985eb14525df2261eacbae069a084334 463 Pfam PF00982 Glycosyltransferase family 20 16 455 2.9E-128 T 19-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 ALIDE2_RS23110 66ac4ad3e3ba2d40c35046d1014ced7e 184 PANTHER PTHR30529 1 181 1.4E-70 T 19-04-2016 ALIDE2_RS23110 66ac4ad3e3ba2d40c35046d1014ced7e 184 PANTHER PTHR30529:SF3 1 181 1.4E-70 T 19-04-2016 ALIDE2_RS23110 66ac4ad3e3ba2d40c35046d1014ced7e 184 SUPERFAMILY SSF81342 6 177 3.77E-30 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 ALIDE2_RS23110 66ac4ad3e3ba2d40c35046d1014ced7e 184 Pfam PF01292 Prokaryotic cytochrome b561 7 177 1.7E-23 T 19-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ALIDE2_RS12850 822ea334213ac4a2bbff6de5502de8e1 468 SUPERFAMILY SSF56954 3 457 1.44E-97 T 19-04-2016 ALIDE2_RS12850 822ea334213ac4a2bbff6de5502de8e1 468 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 6 454 4.1E-97 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 ALIDE2_RS12850 822ea334213ac4a2bbff6de5502de8e1 468 Pfam PF02321 Outer membrane efflux protein 273 430 3.9E-23 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS12850 822ea334213ac4a2bbff6de5502de8e1 468 Pfam PF02321 Outer membrane efflux protein 64 242 7.9E-25 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS12850 822ea334213ac4a2bbff6de5502de8e1 468 PANTHER PTHR30203 5 461 1.3E-102 T 19-04-2016 ALIDE2_RS12850 822ea334213ac4a2bbff6de5502de8e1 468 Gene3D G3DSA:1.20.1600.10 50 457 5.5E-102 T 19-04-2016 ALIDE2_RS12850 822ea334213ac4a2bbff6de5502de8e1 468 PANTHER PTHR30203:SF3 5 461 1.3E-102 T 19-04-2016 ALIDE2_RS16575 a92fa7fd93a2db33c28eb2ffe0be167f 188 Pfam PF05309 TraE protein 1 182 1.5E-56 T 19-04-2016 IPR007973 Pilus assembly TraE GO:0000746 ALIDE2_RS16575 a92fa7fd93a2db33c28eb2ffe0be167f 188 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 1 181 3.7E-56 T 19-04-2016 IPR007973 Pilus assembly TraE GO:0000746 ALIDE2_RS13020 6b655d23708451d147b933a9a74a9739 258 PANTHER PTHR40267 21 258 4.8E-35 T 19-04-2016 ALIDE2_RS13020 6b655d23708451d147b933a9a74a9739 258 Pfam PF01177 Asp/Glu/Hydantoin racemase 91 239 1.5E-9 T 19-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS13020 6b655d23708451d147b933a9a74a9739 258 PIRSF PIRSF015736 11 258 3.6E-88 T 19-04-2016 IPR026286 Maleate isomerase/Arylmalonate decarboxylase ALIDE2_RS14180 249322c3fa2c51922613f6cdf295046a 161 PIRSF PIRSF021700 2 161 1.2E-67 T 19-04-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase ALIDE2_RS14180 249322c3fa2c51922613f6cdf295046a 161 PANTHER PTHR33990:SF3 5 161 5.1E-115 T 19-04-2016 ALIDE2_RS14180 249322c3fa2c51922613f6cdf295046a 161 Gene3D G3DSA:3.10.180.10 5 133 1.8E-40 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS14180 249322c3fa2c51922613f6cdf295046a 161 PANTHER PTHR33990 5 161 5.1E-115 T 19-04-2016 ALIDE2_RS14180 249322c3fa2c51922613f6cdf295046a 161 SUPERFAMILY SSF54593 6 159 1.85E-49 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS14180 249322c3fa2c51922613f6cdf295046a 161 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 6 121 3.5E-47 T 19-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase ALIDE2_RS18800 1659716ba3ebb71d2e84e4acae8330e8 549 SUPERFAMILY SSF52540 1 272 7.97E-119 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18800 1659716ba3ebb71d2e84e4acae8330e8 549 Gene3D G3DSA:3.40.50.880 292 548 7.9E-95 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS18800 1659716ba3ebb71d2e84e4acae8330e8 549 TIGRFAM TIGR00337 PyrG: CTP synthase 1 541 4.0E-233 T 19-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 ALIDE2_RS18800 1659716ba3ebb71d2e84e4acae8330e8 549 PANTHER PTHR11550 1 548 0.0 T 19-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 ALIDE2_RS18800 1659716ba3ebb71d2e84e4acae8330e8 549 Pfam PF00117 Glutamine amidotransferase class-I 305 541 4.0E-54 T 19-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 ALIDE2_RS18800 1659716ba3ebb71d2e84e4acae8330e8 549 SUPERFAMILY SSF52317 293 548 2.22E-80 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS18800 1659716ba3ebb71d2e84e4acae8330e8 549 Gene3D G3DSA:3.40.50.300 1 287 1.7E-130 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18800 1659716ba3ebb71d2e84e4acae8330e8 549 Pfam PF06418 CTP synthase N-terminus 3 270 1.5E-123 T 19-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 ALIDE2_RS18800 1659716ba3ebb71d2e84e4acae8330e8 549 Hamap MF_01227 CTP synthase [pyrG]. 2 546 50.294 T 19-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 ALIDE2_RS18590 b452c6e380555c7029f0c3029ff9d31a 434 Pfam PF00005 ABC transporter 46 192 6.7E-33 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS18590 b452c6e380555c7029f0c3029ff9d31a 434 Pfam PF00571 CBS domain 348 395 1.9E-4 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS18590 b452c6e380555c7029f0c3029ff9d31a 434 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 395 2.7E-144 T 19-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 ALIDE2_RS18590 b452c6e380555c7029f0c3029ff9d31a 434 PANTHER PTHR24220 315 331 5.9E-152 T 19-04-2016 ALIDE2_RS18590 b452c6e380555c7029f0c3029ff9d31a 434 SMART SM00382 53 242 1.1E-18 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS18590 b452c6e380555c7029f0c3029ff9d31a 434 PANTHER PTHR24220 6 16 5.9E-152 T 19-04-2016 ALIDE2_RS18590 b452c6e380555c7029f0c3029ff9d31a 434 PANTHER PTHR24220 41 297 5.9E-152 T 19-04-2016 ALIDE2_RS18590 b452c6e380555c7029f0c3029ff9d31a 434 PANTHER PTHR24220:SF374 6 16 5.9E-152 T 19-04-2016 ALIDE2_RS18590 b452c6e380555c7029f0c3029ff9d31a 434 Gene3D G3DSA:3.10.580.10 273 396 1.5E-22 T 19-04-2016 ALIDE2_RS18590 b452c6e380555c7029f0c3029ff9d31a 434 PANTHER PTHR24220:SF374 315 331 5.9E-152 T 19-04-2016 ALIDE2_RS18590 b452c6e380555c7029f0c3029ff9d31a 434 SUPERFAMILY SSF52540 43 269 9.78E-76 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18590 b452c6e380555c7029f0c3029ff9d31a 434 SUPERFAMILY SSF54631 275 394 2.02E-15 T 19-04-2016 ALIDE2_RS18590 b452c6e380555c7029f0c3029ff9d31a 434 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS18590 b452c6e380555c7029f0c3029ff9d31a 434 PANTHER PTHR24220:SF374 41 297 5.9E-152 T 19-04-2016 ALIDE2_RS18590 b452c6e380555c7029f0c3029ff9d31a 434 Gene3D G3DSA:3.40.50.300 44 265 1.7E-78 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15905 40ad806cc04d4bb2ff43672551349540 336 Pfam PF04909 Amidohydrolase 28 335 1.1E-38 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 ALIDE2_RS15905 40ad806cc04d4bb2ff43672551349540 336 Gene3D G3DSA:3.20.20.140 22 335 8.0E-50 T 19-04-2016 ALIDE2_RS15905 40ad806cc04d4bb2ff43672551349540 336 PANTHER PTHR21240:SF9 1 335 1.5E-78 T 19-04-2016 ALIDE2_RS15905 40ad806cc04d4bb2ff43672551349540 336 PANTHER PTHR21240 1 335 1.5E-78 T 19-04-2016 ALIDE2_RS15905 40ad806cc04d4bb2ff43672551349540 336 SUPERFAMILY SSF51556 26 335 8.16E-41 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS07050 c7c011bfda73a5252e3502420f8d6a56 382 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 6 381 27.783 T 19-04-2016 IPR017687 Outer membrane protein assembly factor BamB ALIDE2_RS07050 c7c011bfda73a5252e3502420f8d6a56 382 PANTHER PTHR34512:SF1 69 130 9.4E-19 T 19-04-2016 ALIDE2_RS07050 c7c011bfda73a5252e3502420f8d6a56 382 SMART SM00564 181 220 80.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ALIDE2_RS07050 c7c011bfda73a5252e3502420f8d6a56 382 SMART SM00564 145 176 0.041 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ALIDE2_RS07050 c7c011bfda73a5252e3502420f8d6a56 382 SMART SM00564 66 98 2.2 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ALIDE2_RS07050 c7c011bfda73a5252e3502420f8d6a56 382 PANTHER PTHR34512 69 130 9.4E-19 T 19-04-2016 ALIDE2_RS07050 c7c011bfda73a5252e3502420f8d6a56 382 Gene3D G3DSA:2.140.10.10 14 381 6.3E-48 T 19-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain ALIDE2_RS07050 c7c011bfda73a5252e3502420f8d6a56 382 SUPERFAMILY SSF50998 36 379 1.35E-52 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ALIDE2_RS07050 c7c011bfda73a5252e3502420f8d6a56 382 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 14 379 1.6E-93 T 19-04-2016 IPR017687 Outer membrane protein assembly factor BamB ALIDE2_RS07050 c7c011bfda73a5252e3502420f8d6a56 382 PANTHER PTHR34512:SF1 156 382 9.4E-19 T 19-04-2016 ALIDE2_RS07050 c7c011bfda73a5252e3502420f8d6a56 382 Pfam PF13360 PQQ-like domain 80 307 4.4E-53 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat ALIDE2_RS07050 c7c011bfda73a5252e3502420f8d6a56 382 PANTHER PTHR34512 156 382 9.4E-19 T 19-04-2016 ALIDE2_RS13115 3f95687f25582e1ac6b52c9a98d30c8c 183 Gene3D G3DSA:3.40.50.360 1 180 1.2E-50 T 19-04-2016 IPR029039 Flavoprotein-like domain ALIDE2_RS13115 3f95687f25582e1ac6b52c9a98d30c8c 183 PANTHER PTHR30543:SF6 1 182 4.0E-59 T 19-04-2016 ALIDE2_RS13115 3f95687f25582e1ac6b52c9a98d30c8c 183 Pfam PF03358 NADPH-dependent FMN reductase 5 147 1.1E-36 T 19-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ALIDE2_RS13115 3f95687f25582e1ac6b52c9a98d30c8c 183 SUPERFAMILY SSF52218 5 172 4.85E-45 T 19-04-2016 IPR029039 Flavoprotein-like domain ALIDE2_RS13115 3f95687f25582e1ac6b52c9a98d30c8c 183 PANTHER PTHR30543 1 182 4.0E-59 T 19-04-2016 ALIDE2_RS16465 e0f1d2a966d198f960026c01309227a6 317 Pfam PF00589 Phage integrase family 124 298 2.3E-8 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS16465 e0f1d2a966d198f960026c01309227a6 317 SUPERFAMILY SSF56349 102 291 6.47E-16 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS16465 e0f1d2a966d198f960026c01309227a6 317 Gene3D G3DSA:1.10.443.10 105 296 5.4E-16 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS03350 04de14656268e69bb1cbb5ad314aa223 331 SMART SM00271 4 61 1.4E-26 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS03350 04de14656268e69bb1cbb5ad314aa223 331 Pfam PF01556 DnaJ C terminal domain 146 299 1.7E-28 T 19-04-2016 IPR002939 Chaperone DnaJ, C-terminal ALIDE2_RS03350 04de14656268e69bb1cbb5ad314aa223 331 Gene3D G3DSA:2.60.260.20 133 221 6.1E-18 T 19-04-2016 ALIDE2_RS03350 04de14656268e69bb1cbb5ad314aa223 331 PANTHER PTHR24078:SF190 4 316 1.1E-62 T 19-04-2016 ALIDE2_RS03350 04de14656268e69bb1cbb5ad314aa223 331 SUPERFAMILY SSF49493 227 310 2.75E-16 T 19-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ALIDE2_RS03350 04de14656268e69bb1cbb5ad314aa223 331 Gene3D G3DSA:2.60.260.20 227 299 1.6E-12 T 19-04-2016 ALIDE2_RS03350 04de14656268e69bb1cbb5ad314aa223 331 Gene3D G3DSA:1.10.287.110 1 116 1.8E-30 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS03350 04de14656268e69bb1cbb5ad314aa223 331 SUPERFAMILY SSF46565 1 72 1.44E-29 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS03350 04de14656268e69bb1cbb5ad314aa223 331 Pfam PF00226 DnaJ domain 5 66 5.6E-23 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS03350 04de14656268e69bb1cbb5ad314aa223 331 SUPERFAMILY SSF49493 138 234 1.7E-15 T 19-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ALIDE2_RS03350 04de14656268e69bb1cbb5ad314aa223 331 PANTHER PTHR24078 4 316 1.1E-62 T 19-04-2016 ALIDE2_RS03350 04de14656268e69bb1cbb5ad314aa223 331 PRINTS PR00625 DnaJ domain signature 41 61 2.0E-21 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS03350 04de14656268e69bb1cbb5ad314aa223 331 PRINTS PR00625 DnaJ domain signature 7 25 2.0E-21 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS03350 04de14656268e69bb1cbb5ad314aa223 331 PRINTS PR00625 DnaJ domain signature 25 40 2.0E-21 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS03350 04de14656268e69bb1cbb5ad314aa223 331 PRINTS PR00625 DnaJ domain signature 61 80 2.0E-21 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS12760 151987e38d1db16c1c95a48e44003400 685 Gene3D G3DSA:3.90.260.10 358 616 2.3E-50 T 19-04-2016 IPR002931 Transglutaminase-like ALIDE2_RS12760 151987e38d1db16c1c95a48e44003400 685 PANTHER PTHR33490:SF4 28 680 3.1E-57 T 19-04-2016 ALIDE2_RS12760 151987e38d1db16c1c95a48e44003400 685 Pfam PF11992 Domain of unknown function (DUF3488) 17 343 1.5E-105 T 19-04-2016 IPR021878 Protein of unknown function DUF3488 ALIDE2_RS12760 151987e38d1db16c1c95a48e44003400 685 SMART SM00460 424 495 3.0E-21 T 19-04-2016 IPR002931 Transglutaminase-like ALIDE2_RS12760 151987e38d1db16c1c95a48e44003400 685 Pfam PF01841 Transglutaminase-like superfamily 396 493 3.4E-24 T 19-04-2016 IPR002931 Transglutaminase-like ALIDE2_RS12760 151987e38d1db16c1c95a48e44003400 685 SUPERFAMILY SSF54001 288 623 1.12E-62 T 19-04-2016 ALIDE2_RS12760 151987e38d1db16c1c95a48e44003400 685 PANTHER PTHR33490 28 680 3.1E-57 T 19-04-2016 ALIDE2_RS00575 baa7f961bc8499f0a00e1045b9a18ee6 226 PANTHER PTHR30352:SF4 11 168 1.6E-24 T 19-04-2016 ALIDE2_RS00575 baa7f961bc8499f0a00e1045b9a18ee6 226 Gene3D G3DSA:3.20.20.70 24 206 3.9E-22 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS00575 baa7f961bc8499f0a00e1045b9a18ee6 226 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 12 199 1.8E-59 T 19-04-2016 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein ALIDE2_RS00575 baa7f961bc8499f0a00e1045b9a18ee6 226 SUPERFAMILY SSF102114 24 205 9.81E-23 T 19-04-2016 ALIDE2_RS00575 baa7f961bc8499f0a00e1045b9a18ee6 226 Pfam PF13353 4Fe-4S single cluster domain 27 97 4.6E-7 T 19-04-2016 ALIDE2_RS00575 baa7f961bc8499f0a00e1045b9a18ee6 226 Pfam PF04055 Radical SAM superfamily 30 162 1.9E-14 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ALIDE2_RS00575 baa7f961bc8499f0a00e1045b9a18ee6 226 PANTHER PTHR30352 11 168 1.6E-24 T 19-04-2016 ALIDE2_RS13335 71369635333f955a002a29f5cbb997f1 641 SMART SM00382 194 333 2.8E-25 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS13335 71369635333f955a002a29f5cbb997f1 641 Gene3D G3DSA:1.10.8.60 342 415 5.2E-29 T 19-04-2016 ALIDE2_RS13335 71369635333f955a002a29f5cbb997f1 641 ProSitePatterns PS00674 AAA-protein family signature. 301 319 - T 19-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 ALIDE2_RS13335 71369635333f955a002a29f5cbb997f1 641 Gene3D G3DSA:3.40.50.300 157 341 1.3E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13335 71369635333f955a002a29f5cbb997f1 641 SUPERFAMILY SSF52540 155 401 9.36E-72 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13335 71369635333f955a002a29f5cbb997f1 641 SUPERFAMILY SSF140990 412 612 9.02E-77 T 19-04-2016 ALIDE2_RS13335 71369635333f955a002a29f5cbb997f1 641 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 110 601 8.0E-240 T 19-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 ALIDE2_RS13335 71369635333f955a002a29f5cbb997f1 641 Pfam PF06480 FtsH Extracellular 11 94 3.7E-9 T 19-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 ALIDE2_RS13335 71369635333f955a002a29f5cbb997f1 641 PANTHER PTHR23076 3 641 0.0 T 19-04-2016 ALIDE2_RS13335 71369635333f955a002a29f5cbb997f1 641 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 8 615 37.196 T 19-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 ALIDE2_RS13335 71369635333f955a002a29f5cbb997f1 641 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 198 330 1.3E-45 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS13335 71369635333f955a002a29f5cbb997f1 641 Pfam PF01434 Peptidase family M41 392 600 9.6E-83 T 19-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 ALIDE2_RS15505 26857594db8e0a8c593941ce35eade78 337 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 81 331 4.1E-42 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS15505 26857594db8e0a8c593941ce35eade78 337 PANTHER PTHR11820:SF85 282 321 2.8E-135 T 19-04-2016 ALIDE2_RS15505 26857594db8e0a8c593941ce35eade78 337 PANTHER PTHR11820:SF85 9 266 2.8E-135 T 19-04-2016 ALIDE2_RS15505 26857594db8e0a8c593941ce35eade78 337 Gene3D G3DSA:3.90.850.10 304 316 2.7E-43 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS15505 26857594db8e0a8c593941ce35eade78 337 Gene3D G3DSA:3.90.850.10 66 268 2.7E-43 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS15505 26857594db8e0a8c593941ce35eade78 337 SUPERFAMILY SSF56529 76 331 9.81E-58 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS15505 26857594db8e0a8c593941ce35eade78 337 PANTHER PTHR11820 282 321 2.8E-135 T 19-04-2016 ALIDE2_RS15505 26857594db8e0a8c593941ce35eade78 337 PANTHER PTHR11820 9 266 2.8E-135 T 19-04-2016 ALIDE2_RS14625 91934756a70e10eb4260a38ac3943683 141 PANTHER PTHR30558 6 141 2.7E-24 T 19-04-2016 ALIDE2_RS14625 91934756a70e10eb4260a38ac3943683 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 134 6.1E-29 T 19-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS14625 91934756a70e10eb4260a38ac3943683 141 PANTHER PTHR30558:SF5 6 141 2.7E-24 T 19-04-2016 ALIDE2_RS06040 0a635a6da998e8d3b9156db3ef04b510 397 PANTHER PTHR11751 10 396 5.1E-112 T 19-04-2016 ALIDE2_RS06040 0a635a6da998e8d3b9156db3ef04b510 397 PANTHER PTHR11751:SF294 10 396 5.1E-112 T 19-04-2016 ALIDE2_RS06040 0a635a6da998e8d3b9156db3ef04b510 397 SUPERFAMILY SSF53383 2 396 3.5E-104 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS06040 0a635a6da998e8d3b9156db3ef04b510 397 Gene3D G3DSA:3.90.1150.10 277 396 1.4E-9 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS06040 0a635a6da998e8d3b9156db3ef04b510 397 Gene3D G3DSA:3.40.640.10 54 276 1.4E-80 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS06040 0a635a6da998e8d3b9156db3ef04b510 397 Pfam PF00155 Aminotransferase class I and II 42 391 2.3E-39 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ALIDE2_RS18695 89a900965448465bd679c6e800239a16 297 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 19-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 ALIDE2_RS18695 89a900965448465bd679c6e800239a16 297 Gene3D G3DSA:1.10.600.10 8 292 8.2E-90 T 19-04-2016 IPR008949 Isoprenoid synthase domain ALIDE2_RS18695 89a900965448465bd679c6e800239a16 297 Pfam PF00348 Polyprenyl synthetase 36 265 2.6E-56 T 19-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 ALIDE2_RS18695 89a900965448465bd679c6e800239a16 297 PANTHER PTHR12001 2 291 1.5E-104 T 19-04-2016 IPR017446 Polyprenyl synthetase-related ALIDE2_RS18695 89a900965448465bd679c6e800239a16 297 PANTHER PTHR12001:SF23 2 291 1.5E-104 T 19-04-2016 ALIDE2_RS18695 89a900965448465bd679c6e800239a16 297 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 84 100 - T 19-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 ALIDE2_RS18695 89a900965448465bd679c6e800239a16 297 SUPERFAMILY SSF48576 25 275 3.78E-82 T 19-04-2016 IPR008949 Isoprenoid synthase domain ALIDE2_RS21420 de2196ed22116792d7e4f59ee8d03f3d 824 PANTHER PTHR11908 17 823 6.3E-229 T 19-04-2016 ALIDE2_RS21420 de2196ed22116792d7e4f59ee8d03f3d 824 SUPERFAMILY SSF54665 20 168 6.8E-46 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ALIDE2_RS21420 de2196ed22116792d7e4f59ee8d03f3d 824 SUPERFAMILY SSF56003 143 818 1.7E-154 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS21420 de2196ed22116792d7e4f59ee8d03f3d 824 Gene3D G3DSA:3.30.365.10 197 303 1.5E-22 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS21420 de2196ed22116792d7e4f59ee8d03f3d 824 Gene3D G3DSA:3.90.1170.50 21 139 3.8E-47 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ALIDE2_RS21420 de2196ed22116792d7e4f59ee8d03f3d 824 PANTHER PTHR11908:SF76 17 823 6.3E-229 T 19-04-2016 ALIDE2_RS21420 de2196ed22116792d7e4f59ee8d03f3d 824 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 169 755 2.0E-142 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS21420 de2196ed22116792d7e4f59ee8d03f3d 824 Gene3D G3DSA:3.30.365.10 140 196 1.0E-35 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS21420 de2196ed22116792d7e4f59ee8d03f3d 824 Gene3D G3DSA:3.30.365.10 307 381 1.0E-35 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS21420 de2196ed22116792d7e4f59ee8d03f3d 824 SMART SM01008 41 151 1.8E-51 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ALIDE2_RS21420 de2196ed22116792d7e4f59ee8d03f3d 824 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 41 151 6.8E-33 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ALIDE2_RS21420 de2196ed22116792d7e4f59ee8d03f3d 824 Gene3D G3DSA:3.30.365.10 476 652 1.5E-28 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS21420 de2196ed22116792d7e4f59ee8d03f3d 824 Gene3D G3DSA:3.30.365.10 383 475 1.7E-60 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS21420 de2196ed22116792d7e4f59ee8d03f3d 824 Gene3D G3DSA:3.30.365.10 670 819 1.7E-60 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ALIDE2_RS20315 bb43f473c08d4bf1e8f246e7fd98734c 389 Gene3D G3DSA:3.40.50.10540 309 379 1.2E-102 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS20315 bb43f473c08d4bf1e8f246e7fd98734c 389 Gene3D G3DSA:3.40.50.10540 11 224 1.2E-102 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS20315 bb43f473c08d4bf1e8f246e7fd98734c 389 SUPERFAMILY SSF89796 13 379 2.62E-113 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS20315 bb43f473c08d4bf1e8f246e7fd98734c 389 Gene3D G3DSA:3.30.1540.10 228 308 4.7E-19 T 19-04-2016 ALIDE2_RS20315 bb43f473c08d4bf1e8f246e7fd98734c 389 Pfam PF02515 CoA-transferase family III 15 376 8.7E-118 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS20315 bb43f473c08d4bf1e8f246e7fd98734c 389 PANTHER PTHR24023:SF593 89 386 2.1E-33 T 19-04-2016 ALIDE2_RS20315 bb43f473c08d4bf1e8f246e7fd98734c 389 PANTHER PTHR24023 89 386 2.1E-33 T 19-04-2016 ALIDE2_RS18600 33a3d86074ec23252e211e2e0e368265 336 Gene3D G3DSA:3.40.190.100 118 268 1.5E-54 T 19-04-2016 ALIDE2_RS18600 33a3d86074ec23252e211e2e0e368265 336 SUPERFAMILY SSF53850 29 334 3.91E-89 T 19-04-2016 ALIDE2_RS18600 33a3d86074ec23252e211e2e0e368265 336 Gene3D G3DSA:3.40.190.10 28 117 5.1E-50 T 19-04-2016 ALIDE2_RS18600 33a3d86074ec23252e211e2e0e368265 336 Gene3D G3DSA:3.40.190.10 269 335 5.1E-50 T 19-04-2016 ALIDE2_RS18600 33a3d86074ec23252e211e2e0e368265 336 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 40 318 1.0E-54 T 19-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 ALIDE2_RS11610 701daf57b74c6480a2f2d61b2994b2f1 472 PIRSF PIRSF006446 2 459 3.3E-212 T 19-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 ALIDE2_RS11610 701daf57b74c6480a2f2d61b2994b2f1 472 PANTHER PTHR30365 1 456 1.5E-266 T 19-04-2016 ALIDE2_RS11610 701daf57b74c6480a2f2d61b2994b2f1 472 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 9.6E-165 T 19-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 ALIDE2_RS11610 701daf57b74c6480a2f2d61b2994b2f1 472 PANTHER PTHR30365:SF8 1 456 1.5E-266 T 19-04-2016 ALIDE2_RS10555 13ba31e21e3e124b7ffd72561f1e8bde 314 SMART SM00450 25 143 1.3E-16 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS10555 13ba31e21e3e124b7ffd72561f1e8bde 314 SMART SM00450 166 288 9.3E-6 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS10555 13ba31e21e3e124b7ffd72561f1e8bde 314 Gene3D G3DSA:3.40.250.10 163 288 1.5E-20 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS10555 13ba31e21e3e124b7ffd72561f1e8bde 314 PANTHER PTHR11364 5 310 6.4E-44 T 19-04-2016 ALIDE2_RS10555 13ba31e21e3e124b7ffd72561f1e8bde 314 Gene3D G3DSA:3.40.250.10 20 158 1.5E-28 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS10555 13ba31e21e3e124b7ffd72561f1e8bde 314 SUPERFAMILY SSF52821 162 288 8.25E-20 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS10555 13ba31e21e3e124b7ffd72561f1e8bde 314 Pfam PF00581 Rhodanese-like domain 169 284 5.7E-6 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS10555 13ba31e21e3e124b7ffd72561f1e8bde 314 Pfam PF00581 Rhodanese-like domain 26 139 6.2E-15 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS10555 13ba31e21e3e124b7ffd72561f1e8bde 314 SUPERFAMILY SSF52821 20 164 8.38E-27 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS00615 71702982f8c81d422c0f6d9624a1397e 462 PANTHER PTHR30182 1 460 2.0E-236 T 19-04-2016 ALIDE2_RS00615 71702982f8c81d422c0f6d9624a1397e 462 SUPERFAMILY SSF143548 17 157 2.25E-46 T 19-04-2016 IPR029009 Allosteric substrate binding domain ALIDE2_RS00615 71702982f8c81d422c0f6d9624a1397e 462 Gene3D G3DSA:3.30.1330.90 11 157 8.6E-55 T 19-04-2016 IPR029009 Allosteric substrate binding domain ALIDE2_RS00615 71702982f8c81d422c0f6d9624a1397e 462 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 459 5.2E-209 T 19-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 ALIDE2_RS00615 71702982f8c81d422c0f6d9624a1397e 462 Pfam PF03315 Serine dehydratase beta chain 4 156 7.6E-58 T 19-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 ALIDE2_RS00615 71702982f8c81d422c0f6d9624a1397e 462 PANTHER PTHR30182:SF1 1 460 2.0E-236 T 19-04-2016 ALIDE2_RS00615 71702982f8c81d422c0f6d9624a1397e 462 Pfam PF03313 Serine dehydratase alpha chain 195 456 2.7E-102 T 19-04-2016 IPR005130 Serine dehydratase-like, alpha subunit ALIDE2_RS12240 ecd2a226a3699f3323ca6e79206b1891 392 SUPERFAMILY SSF53901 3 270 1.38E-85 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS12240 ecd2a226a3699f3323ca6e79206b1891 392 PANTHER PTHR18919:SF95 1 392 1.6E-220 T 19-04-2016 ALIDE2_RS12240 ecd2a226a3699f3323ca6e79206b1891 392 Pfam PF02803 Thiolase, C-terminal domain 270 392 2.0E-50 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS12240 ecd2a226a3699f3323ca6e79206b1891 392 Gene3D G3DSA:3.40.47.10 142 193 2.1E-69 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS12240 ecd2a226a3699f3323ca6e79206b1891 392 Gene3D G3DSA:3.40.47.10 277 391 2.1E-69 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS12240 ecd2a226a3699f3323ca6e79206b1891 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.1E-143 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS12240 ecd2a226a3699f3323ca6e79206b1891 392 PIRSF PIRSF000429 1 392 3.4E-131 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS12240 ecd2a226a3699f3323ca6e79206b1891 392 PANTHER PTHR18919 1 392 1.6E-220 T 19-04-2016 ALIDE2_RS12240 ecd2a226a3699f3323ca6e79206b1891 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 19-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 ALIDE2_RS12240 ecd2a226a3699f3323ca6e79206b1891 392 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 19-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 ALIDE2_RS12240 ecd2a226a3699f3323ca6e79206b1891 392 Gene3D G3DSA:3.40.47.10 194 276 9.6E-76 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS12240 ecd2a226a3699f3323ca6e79206b1891 392 Gene3D G3DSA:3.40.47.10 3 123 9.6E-76 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS12240 ecd2a226a3699f3323ca6e79206b1891 392 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 19-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 ALIDE2_RS12240 ecd2a226a3699f3323ca6e79206b1891 392 Pfam PF00108 Thiolase, N-terminal domain 4 262 7.3E-104 T 19-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ALIDE2_RS12240 ecd2a226a3699f3323ca6e79206b1891 392 SUPERFAMILY SSF53901 271 392 5.62E-44 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS17105 99fc15ef66b62c6b7b84a5c474e2ae49 412 SUPERFAMILY SSF52540 67 307 3.11E-15 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17105 99fc15ef66b62c6b7b84a5c474e2ae49 412 Pfam PF13481 AAA domain 55 249 4.3E-44 T 19-04-2016 ALIDE2_RS17105 99fc15ef66b62c6b7b84a5c474e2ae49 412 Gene3D G3DSA:3.40.50.300 55 323 1.1E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20205 8a161c59e54cc9498353e8d10261873e 224 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 14 60 2.7E-10 T 19-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 ALIDE2_RS20205 8a161c59e54cc9498353e8d10261873e 224 Pfam PF00072 Response regulator receiver domain 105 214 2.1E-12 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20205 8a161c59e54cc9498353e8d10261873e 224 SUPERFAMILY SSF46955 14 63 4.58E-7 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS20205 8a161c59e54cc9498353e8d10261873e 224 PANTHER PTHR26402 103 192 1.6E-14 T 19-04-2016 ALIDE2_RS20205 8a161c59e54cc9498353e8d10261873e 224 SUPERFAMILY SSF52172 102 223 1.28E-19 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS20205 8a161c59e54cc9498353e8d10261873e 224 Gene3D G3DSA:3.40.50.2300 101 222 9.7E-21 T 19-04-2016 ALIDE2_RS20205 8a161c59e54cc9498353e8d10261873e 224 SMART SM00448 103 218 1.8E-8 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20205 8a161c59e54cc9498353e8d10261873e 224 Pfam PF12728 Helix-turn-helix domain 14 62 6.6E-10 T 19-04-2016 ALIDE2_RS16005 132fc1521177ddc3438134a80aa11b25 406 PANTHER PTHR33567 13 401 9.9E-131 T 19-04-2016 ALIDE2_RS16005 132fc1521177ddc3438134a80aa11b25 406 PIRSF PIRSF004810 3 406 1.8E-123 T 19-04-2016 IPR014047 Chromate transporter, long chain ALIDE2_RS16005 132fc1521177ddc3438134a80aa11b25 406 PANTHER PTHR33567:SF3 13 401 9.9E-131 T 19-04-2016 ALIDE2_RS16005 132fc1521177ddc3438134a80aa11b25 406 Pfam PF02417 Chromate transporter 16 181 1.3E-30 T 19-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 ALIDE2_RS16005 132fc1521177ddc3438134a80aa11b25 406 Pfam PF02417 Chromate transporter 236 401 5.3E-39 T 19-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 ALIDE2_RS16005 132fc1521177ddc3438134a80aa11b25 406 TIGRFAM TIGR00937 2A51: chromate efflux transporter 22 400 3.1E-99 T 19-04-2016 IPR014047 Chromate transporter, long chain ALIDE2_RS13100 1699ee4be79bd2924064c0773c722946 196 Gene3D G3DSA:3.40.50.1820 15 185 2.4E-47 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS13100 1699ee4be79bd2924064c0773c722946 196 Pfam PF06821 Serine hydrolase 16 180 8.6E-63 T 19-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- ALIDE2_RS13100 1699ee4be79bd2924064c0773c722946 196 SUPERFAMILY SSF53474 15 178 1.44E-32 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS17050 a54194f5dbd627a1061bcc81062cba40 300 PANTHER PTHR11075:SF6 4 298 7.1E-135 T 19-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 ALIDE2_RS17050 a54194f5dbd627a1061bcc81062cba40 300 Gene3D G3DSA:1.20.58.410 2 51 3.5E-6 T 19-04-2016 ALIDE2_RS17050 a54194f5dbd627a1061bcc81062cba40 300 Pfam PF00472 RF-1 domain 164 272 8.2E-38 T 19-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ALIDE2_RS17050 a54194f5dbd627a1061bcc81062cba40 300 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 180 196 - T 19-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ALIDE2_RS17050 a54194f5dbd627a1061bcc81062cba40 300 SUPERFAMILY SSF75620 3 297 4.71E-117 T 19-04-2016 ALIDE2_RS17050 a54194f5dbd627a1061bcc81062cba40 300 Gene3D G3DSA:3.30.160.20 163 239 4.8E-36 T 19-04-2016 IPR014720 Double-stranded RNA-binding domain ALIDE2_RS17050 a54194f5dbd627a1061bcc81062cba40 300 Pfam PF03462 PCRF domain 5 154 5.6E-43 T 19-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 ALIDE2_RS17050 a54194f5dbd627a1061bcc81062cba40 300 SMART SM00937 20 130 1.2E-51 T 19-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 ALIDE2_RS17050 a54194f5dbd627a1061bcc81062cba40 300 PANTHER PTHR11075 4 298 7.1E-135 T 19-04-2016 ALIDE2_RS17050 a54194f5dbd627a1061bcc81062cba40 300 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 298 5.8E-132 T 19-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 ALIDE2_RS05000 fc1fdd917bf4d1f4d7325f341466cf38 151 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 11 28 1.9E-29 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ALIDE2_RS05000 fc1fdd917bf4d1f4d7325f341466cf38 151 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 121 139 1.9E-29 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ALIDE2_RS05000 fc1fdd917bf4d1f4d7325f341466cf38 151 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 71 91 1.9E-29 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ALIDE2_RS05000 fc1fdd917bf4d1f4d7325f341466cf38 151 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 95 117 1.9E-29 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ALIDE2_RS05000 fc1fdd917bf4d1f4d7325f341466cf38 151 PANTHER PTHR36918 4 150 1.7E-46 T 19-04-2016 ALIDE2_RS05000 fc1fdd917bf4d1f4d7325f341466cf38 151 PANTHER PTHR36918:SF1 4 150 1.7E-46 T 19-04-2016 ALIDE2_RS05000 fc1fdd917bf4d1f4d7325f341466cf38 151 SUPERFAMILY SSF54611 5 139 6.32E-50 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ALIDE2_RS05000 fc1fdd917bf4d1f4d7325f341466cf38 151 Hamap MF_00821 Protein-export protein SecB [secB]. 1 143 30.071 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ALIDE2_RS05000 fc1fdd917bf4d1f4d7325f341466cf38 151 Gene3D G3DSA:3.10.420.10 3 147 6.7E-59 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ALIDE2_RS05000 fc1fdd917bf4d1f4d7325f341466cf38 151 Pfam PF02556 Preprotein translocase subunit SecB 4 140 1.7E-54 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ALIDE2_RS05000 fc1fdd917bf4d1f4d7325f341466cf38 151 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 4 141 1.3E-47 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ALIDE2_RS19375 6661303ad7bb7736510ef75ed5e181a6 566 Gene3D G3DSA:1.20.210.10 17 504 8.7E-52 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19375 6661303ad7bb7736510ef75ed5e181a6 566 PANTHER PTHR10422:SF17 31 503 2.0E-50 T 19-04-2016 ALIDE2_RS19375 6661303ad7bb7736510ef75ed5e181a6 566 SUPERFAMILY SSF81442 23 509 3.92E-63 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19375 6661303ad7bb7736510ef75ed5e181a6 566 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 25 455 2.6E-56 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19375 6661303ad7bb7736510ef75ed5e181a6 566 PRINTS PR01165 Cytochrome c oxidase subunit I signature 60 83 5.8E-6 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19375 6661303ad7bb7736510ef75ed5e181a6 566 PRINTS PR01165 Cytochrome c oxidase subunit I signature 349 367 5.8E-6 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19375 6661303ad7bb7736510ef75ed5e181a6 566 PRINTS PR01165 Cytochrome c oxidase subunit I signature 377 396 5.8E-6 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19375 6661303ad7bb7736510ef75ed5e181a6 566 PANTHER PTHR10422 31 503 2.0E-50 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS09110 ed4a09ddc05ca5ae60a6789266a5da20 491 Pfam PF11855 Protein of unknown function (DUF3375) 12 489 3.6E-154 T 19-04-2016 IPR021804 Protein of unknown function DUF3375 ALIDE2_RS14355 bf77253f9ead197ed3cfcaced3d83e8e 482 SUPERFAMILY SSF53720 2 478 1.7E-160 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS14355 bf77253f9ead197ed3cfcaced3d83e8e 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS14355 bf77253f9ead197ed3cfcaced3d83e8e 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS14355 bf77253f9ead197ed3cfcaced3d83e8e 482 Pfam PF00171 Aldehyde dehydrogenase family 18 477 3.6E-163 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS14355 bf77253f9ead197ed3cfcaced3d83e8e 482 Gene3D G3DSA:3.40.309.10 259 452 1.1E-65 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ALIDE2_RS14355 bf77253f9ead197ed3cfcaced3d83e8e 482 PANTHER PTHR11699:SF200 5 479 3.2E-233 T 19-04-2016 ALIDE2_RS14355 bf77253f9ead197ed3cfcaced3d83e8e 482 Gene3D G3DSA:3.40.605.10 2 258 7.5E-93 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS14355 bf77253f9ead197ed3cfcaced3d83e8e 482 PANTHER PTHR11699 5 479 3.2E-233 T 19-04-2016 ALIDE2_RS04905 cc425e4758f46a054ff9ef7153accfc0 321 SUPERFAMILY SSF53850 110 285 7.41E-14 T 19-04-2016 ALIDE2_RS04905 cc425e4758f46a054ff9ef7153accfc0 321 PANTHER PTHR30349:SF16 3 275 4.1E-82 T 19-04-2016 ALIDE2_RS04905 cc425e4758f46a054ff9ef7153accfc0 321 PIRSF PIRSF017082 1 321 5.8E-72 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS04905 cc425e4758f46a054ff9ef7153accfc0 321 PANTHER PTHR30349 3 275 4.1E-82 T 19-04-2016 ALIDE2_RS04905 cc425e4758f46a054ff9ef7153accfc0 321 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 317 6.3E-78 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS11085 66f7bd14eb0ee2cfd150b860a3631ffd 263 SMART SM01092 169 261 4.1E-15 T 19-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal ALIDE2_RS11085 66f7bd14eb0ee2cfd150b860a3631ffd 263 PANTHER PTHR11908:SF68 4 262 1.4E-69 T 19-04-2016 ALIDE2_RS11085 66f7bd14eb0ee2cfd150b860a3631ffd 263 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 164 9.6E-46 T 19-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 ALIDE2_RS11085 66f7bd14eb0ee2cfd150b860a3631ffd 263 Gene3D G3DSA:3.30.465.10 55 164 1.4E-35 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ALIDE2_RS11085 66f7bd14eb0ee2cfd150b860a3631ffd 263 SUPERFAMILY SSF55447 168 262 1.05E-17 T 19-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal ALIDE2_RS11085 66f7bd14eb0ee2cfd150b860a3631ffd 263 PANTHER PTHR11908 4 262 1.4E-69 T 19-04-2016 ALIDE2_RS11085 66f7bd14eb0ee2cfd150b860a3631ffd 263 Gene3D G3DSA:3.30.390.50 169 262 3.4E-14 T 19-04-2016 ALIDE2_RS11085 66f7bd14eb0ee2cfd150b860a3631ffd 263 Gene3D G3DSA:3.30.43.10 1 49 3.7E-17 T 19-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 ALIDE2_RS11085 66f7bd14eb0ee2cfd150b860a3631ffd 263 SUPERFAMILY SSF56176 1 165 4.91E-49 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS22550 13f1951ac2f6707d139fedcf2c7e2cd6 398 Gene3D G3DSA:3.40.50.2300 155 301 2.4E-19 T 19-04-2016 ALIDE2_RS22550 13f1951ac2f6707d139fedcf2c7e2cd6 398 SUPERFAMILY SSF53822 28 397 5.0E-87 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS22550 13f1951ac2f6707d139fedcf2c7e2cd6 398 Gene3D G3DSA:3.40.50.2300 302 349 4.3E-31 T 19-04-2016 ALIDE2_RS22550 13f1951ac2f6707d139fedcf2c7e2cd6 398 Gene3D G3DSA:3.40.50.2300 22 151 4.3E-31 T 19-04-2016 ALIDE2_RS22550 13f1951ac2f6707d139fedcf2c7e2cd6 398 PANTHER PTHR30483 8 398 1.3E-166 T 19-04-2016 ALIDE2_RS22550 13f1951ac2f6707d139fedcf2c7e2cd6 398 PANTHER PTHR30483:SF17 8 398 1.3E-166 T 19-04-2016 ALIDE2_RS22550 13f1951ac2f6707d139fedcf2c7e2cd6 398 Pfam PF13458 Periplasmic binding protein 27 362 5.0E-79 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS08020 9360865e0b196b065ce9bc6561848a1a 140 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 2.1E-41 T 19-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 ALIDE2_RS08020 9360865e0b196b065ce9bc6561848a1a 140 SUPERFAMILY SSF52833 3 138 5.52E-40 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS08020 9360865e0b196b065ce9bc6561848a1a 140 PANTHER PTHR30041 1 136 6.2E-51 T 19-04-2016 ALIDE2_RS08020 9360865e0b196b065ce9bc6561848a1a 140 PANTHER PTHR30041:SF0 1 136 6.2E-51 T 19-04-2016 ALIDE2_RS08020 9360865e0b196b065ce9bc6561848a1a 140 Gene3D G3DSA:3.40.30.10 1 140 2.8E-59 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS08020 9360865e0b196b065ce9bc6561848a1a 140 Pfam PF03960 ArsC family 7 115 2.0E-18 T 19-04-2016 IPR006660 Arsenate reductase-like ALIDE2_RS03080 36a9cbe21a97ad53b6e45ef9a59d77ff 303 Pfam PF03934 Type II secretion system (T2SS), protein K 99 213 1.7E-20 T 19-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 ALIDE2_RS03080 36a9cbe21a97ad53b6e45ef9a59d77ff 303 PANTHER PTHR38831 8 202 2.4E-15 T 19-04-2016 ALIDE2_RS03080 36a9cbe21a97ad53b6e45ef9a59d77ff 303 SUPERFAMILY SSF158544 99 191 8.11E-21 T 19-04-2016 ALIDE2_RS03080 36a9cbe21a97ad53b6e45ef9a59d77ff 303 Gene3D G3DSA:1.10.40.60 101 193 2.2E-21 T 19-04-2016 ALIDE2_RS17470 f78c2a50b0abd16676301f006610a8f9 99 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 94 15.768 T 19-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS17470 f78c2a50b0abd16676301f006610a8f9 99 SUPERFAMILY SSF46992 14 95 5.89E-27 T 19-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS17470 f78c2a50b0abd16676301f006610a8f9 99 Gene3D G3DSA:1.20.58.110 14 96 2.2E-27 T 19-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS17470 f78c2a50b0abd16676301f006610a8f9 99 Pfam PF01649 Ribosomal protein S20 14 93 1.1E-24 T 19-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS17470 f78c2a50b0abd16676301f006610a8f9 99 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 21 84 4.0E-26 T 19-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS17470 f78c2a50b0abd16676301f006610a8f9 99 PANTHER PTHR33398:SF1 5 99 1.4E-34 T 19-04-2016 ALIDE2_RS17470 f78c2a50b0abd16676301f006610a8f9 99 PANTHER PTHR33398 5 99 1.4E-34 T 19-04-2016 ALIDE2_RS17470 f78c2a50b0abd16676301f006610a8f9 99 TIGRFAM TIGR00029 S20: ribosomal protein bS20 14 95 7.0E-23 T 19-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21025 de0f98b201e317acc7c1cac2a0e41cba 199 Pfam PF01810 LysE type translocator 15 195 9.6E-10 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 ALIDE2_RS21025 de0f98b201e317acc7c1cac2a0e41cba 199 PANTHER PTHR30086:SF12 1 197 3.4E-32 T 19-04-2016 ALIDE2_RS21025 de0f98b201e317acc7c1cac2a0e41cba 199 PANTHER PTHR30086 1 197 3.4E-32 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 ALIDE2_RS21335 2f133188198a3c4ecedbf85683c71401 143 PANTHER PTHR33175:SF1 46 141 1.9E-18 T 19-04-2016 ALIDE2_RS21335 2f133188198a3c4ecedbf85683c71401 143 SMART SM00411 46 143 3.7E-6 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS21335 2f133188198a3c4ecedbf85683c71401 143 Pfam PF00216 Bacterial DNA-binding protein 47 141 3.0E-14 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS21335 2f133188198a3c4ecedbf85683c71401 143 PANTHER PTHR33175 46 141 1.9E-18 T 19-04-2016 ALIDE2_RS21335 2f133188198a3c4ecedbf85683c71401 143 SUPERFAMILY SSF47729 47 141 2.21E-12 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ALIDE2_RS21335 2f133188198a3c4ecedbf85683c71401 143 Gene3D G3DSA:4.10.520.10 47 141 5.2E-13 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ALIDE2_RS00380 4035b06947788ca0197e88edda769131 268 Gene3D G3DSA:3.40.50.720 4 264 1.8E-79 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00380 4035b06947788ca0197e88edda769131 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 29 263 2.7E-61 T 19-04-2016 ALIDE2_RS00380 4035b06947788ca0197e88edda769131 268 SUPERFAMILY SSF51735 10 264 3.03E-75 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00380 4035b06947788ca0197e88edda769131 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 1.2E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00380 4035b06947788ca0197e88edda769131 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.2E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00380 4035b06947788ca0197e88edda769131 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 1.2E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00380 4035b06947788ca0197e88edda769131 268 PANTHER PTHR24321 6 265 8.8E-53 T 19-04-2016 ALIDE2_RS00380 4035b06947788ca0197e88edda769131 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.3E-32 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00380 4035b06947788ca0197e88edda769131 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.3E-32 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00380 4035b06947788ca0197e88edda769131 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 247 1.3E-32 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00380 4035b06947788ca0197e88edda769131 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.3E-32 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00380 4035b06947788ca0197e88edda769131 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.3E-32 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00380 4035b06947788ca0197e88edda769131 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.3E-32 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00380 4035b06947788ca0197e88edda769131 268 PANTHER PTHR24321:SF6 6 265 8.8E-53 T 19-04-2016 ALIDE2_RS11125 9d4215c2fb5c0801382b92beebabf127 443 Gene3D G3DSA:3.50.50.60 195 299 1.6E-33 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11125 9d4215c2fb5c0801382b92beebabf127 443 Gene3D G3DSA:3.50.50.60 9 107 1.6E-33 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11125 9d4215c2fb5c0801382b92beebabf127 443 PRINTS PR00419 Adrenodoxin reductase family signature 9 31 3.2E-6 T 19-04-2016 ALIDE2_RS11125 9d4215c2fb5c0801382b92beebabf127 443 PRINTS PR00419 Adrenodoxin reductase family signature 32 45 3.2E-6 T 19-04-2016 ALIDE2_RS11125 9d4215c2fb5c0801382b92beebabf127 443 Pfam PF01593 Flavin containing amine oxidoreductase 17 388 1.0E-29 T 19-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 ALIDE2_RS11125 9d4215c2fb5c0801382b92beebabf127 443 PANTHER PTHR10742 9 437 4.1E-70 T 19-04-2016 ALIDE2_RS11125 9d4215c2fb5c0801382b92beebabf127 443 PANTHER PTHR10742:SF266 9 437 4.1E-70 T 19-04-2016 ALIDE2_RS11125 9d4215c2fb5c0801382b92beebabf127 443 SUPERFAMILY SSF51905 10 298 3.56E-44 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11125 9d4215c2fb5c0801382b92beebabf127 443 SUPERFAMILY SSF51905 401 435 3.56E-44 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11740 c4cebece1ea83c9afc81c263a25a09b9 383 Pfam PF00155 Aminotransferase class I and II 30 380 1.7E-55 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ALIDE2_RS11740 c4cebece1ea83c9afc81c263a25a09b9 383 PANTHER PTHR11751:SF301 9 383 1.4E-128 T 19-04-2016 ALIDE2_RS11740 c4cebece1ea83c9afc81c263a25a09b9 383 Gene3D G3DSA:3.90.1150.10 272 382 7.5E-18 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS11740 c4cebece1ea83c9afc81c263a25a09b9 383 Gene3D G3DSA:3.40.640.10 43 271 1.1E-74 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS11740 c4cebece1ea83c9afc81c263a25a09b9 383 SUPERFAMILY SSF53383 5 382 2.63E-101 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS11740 c4cebece1ea83c9afc81c263a25a09b9 383 PANTHER PTHR11751 9 383 1.4E-128 T 19-04-2016 ALIDE2_RS05975 e4e1e019272faa2839cd7b0b7f4e9412 291 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 36 8.7E-5 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS05975 e4e1e019272faa2839cd7b0b7f4e9412 291 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS05975 e4e1e019272faa2839cd7b0b7f4e9412 291 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 11 35 1.8E-7 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS05975 e4e1e019272faa2839cd7b0b7f4e9412 291 Pfam PF16074 Type IV Pilus-assembly protein W 176 282 3.4E-11 T 19-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 ALIDE2_RS16325 a706a1c1633bfe35000f2b224de26c66 246 Pfam PF14460 Prokaryotic E2 family D 65 231 2.9E-52 T 19-04-2016 IPR032787 Prokaryotic E2 family D ALIDE2_RS16325 a706a1c1633bfe35000f2b224de26c66 246 TIGRFAM TIGR03737 PRTRC_B: PRTRC system protein B 17 243 1.4E-83 T 19-04-2016 IPR022280 ParB-related, ThiF-related cassette, protein B ALIDE2_RS00385 79e2def51203e9bce122b691bec3a5c8 253 PANTHER PTHR24322 155 186 5.6E-32 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00385 79e2def51203e9bce122b691bec3a5c8 253 PANTHER PTHR24322 12 139 5.6E-32 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00385 79e2def51203e9bce122b691bec3a5c8 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 2.1E-44 T 19-04-2016 ALIDE2_RS00385 79e2def51203e9bce122b691bec3a5c8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.4E-29 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00385 79e2def51203e9bce122b691bec3a5c8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.4E-29 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00385 79e2def51203e9bce122b691bec3a5c8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.4E-29 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00385 79e2def51203e9bce122b691bec3a5c8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.4E-29 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00385 79e2def51203e9bce122b691bec3a5c8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.4E-29 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00385 79e2def51203e9bce122b691bec3a5c8 253 Gene3D G3DSA:3.40.50.720 1 246 4.5E-62 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00385 79e2def51203e9bce122b691bec3a5c8 253 SUPERFAMILY SSF51735 4 246 9.81E-59 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03760 8b9c51a6a77df791396c1f1aaecd0777 154 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 17 89 1.9E-17 T 19-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 ALIDE2_RS03760 8b9c51a6a77df791396c1f1aaecd0777 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 40 7.5E-7 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03760 8b9c51a6a77df791396c1f1aaecd0777 154 SUPERFAMILY SSF54523 21 98 2.9E-10 T 19-04-2016 ALIDE2_RS03760 8b9c51a6a77df791396c1f1aaecd0777 154 Pfam PF13633 Prokaryotic N-terminal methylation site 18 40 7.6E-7 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03760 8b9c51a6a77df791396c1f1aaecd0777 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 19 39 - T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS24025 f089a857ec8b2cfdf95dcddbe8a97438 227 PANTHER PTHR32552 34 223 2.7E-29 T 19-04-2016 ALIDE2_RS24025 f089a857ec8b2cfdf95dcddbe8a97438 227 PANTHER PTHR32552:SF14 34 223 2.7E-29 T 19-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 ALIDE2_RS24025 f089a857ec8b2cfdf95dcddbe8a97438 227 SUPERFAMILY SSF56935 10 223 2.52E-22 T 19-04-2016 ALIDE2_RS24025 f089a857ec8b2cfdf95dcddbe8a97438 227 Pfam PF00593 TonB dependent receptor 87 155 1.5E-4 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS24025 f089a857ec8b2cfdf95dcddbe8a97438 227 Gene3D G3DSA:2.40.170.20 167 223 2.3E-6 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS24025 f089a857ec8b2cfdf95dcddbe8a97438 227 Gene3D G3DSA:2.40.170.20 24 164 9.6E-26 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 PANTHER PTHR24423 189 465 5.3E-50 T 19-04-2016 ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 PANTHER PTHR24423 1 9 5.3E-50 T 19-04-2016 ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 Gene3D G3DSA:1.10.287.130 240 307 8.3E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 Pfam PF08521 Two-component sensor kinase N-terminal 20 171 7.1E-40 T 19-04-2016 IPR013727 Two-component sensor kinase, N-terminal ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 310 2.7E-9 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 453 3.5E-17 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 Pfam PF00672 HAMP domain 181 244 2.6E-7 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 PANTHER PTHR24423:SF474 189 465 5.3E-50 T 19-04-2016 ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 PANTHER PTHR24423:SF474 1 9 5.3E-50 T 19-04-2016 ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 SMART SM00387 355 466 1.2E-25 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 SUPERFAMILY SSF47384 231 309 2.35E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 SMART SM00388 248 311 1.4E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 Gene3D G3DSA:3.30.565.10 318 466 7.8E-31 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 3.4E-11 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 3.4E-11 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 420 3.4E-11 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS10515 385c8ed86c001affd68f7aaceb71c88f 467 SUPERFAMILY SSF55874 300 464 6.94E-29 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS07510 9ce846ae1104c000f20ca73f48b48a03 405 Gene3D G3DSA:3.40.50.10540 305 390 2.5E-102 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07510 9ce846ae1104c000f20ca73f48b48a03 405 Gene3D G3DSA:3.40.50.10540 2 216 2.5E-102 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07510 9ce846ae1104c000f20ca73f48b48a03 405 Gene3D G3DSA:3.30.1540.10 223 304 8.1E-30 T 19-04-2016 ALIDE2_RS07510 9ce846ae1104c000f20ca73f48b48a03 405 PANTHER PTHR24023:SF593 54 382 1.9E-33 T 19-04-2016 ALIDE2_RS07510 9ce846ae1104c000f20ca73f48b48a03 405 SUPERFAMILY SSF89796 3 390 6.8E-127 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07510 9ce846ae1104c000f20ca73f48b48a03 405 Pfam PF02515 CoA-transferase family III 5 372 2.8E-112 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS07510 9ce846ae1104c000f20ca73f48b48a03 405 PANTHER PTHR24023 54 382 1.9E-33 T 19-04-2016 ALIDE2_RS02520 154ee265fe42c6a8cda466aad1cbdcc0 234 Pfam PF16537 Type II secretion system protein B 174 232 2.1E-20 T 19-04-2016 IPR032389 Type II secretion system protein B ALIDE2_RS02520 154ee265fe42c6a8cda466aad1cbdcc0 234 PRINTS PR01217 Proline rich extensin signature 26 42 6.6E-9 T 19-04-2016 ALIDE2_RS02520 154ee265fe42c6a8cda466aad1cbdcc0 234 PRINTS PR01217 Proline rich extensin signature 68 89 6.6E-9 T 19-04-2016 ALIDE2_RS02520 154ee265fe42c6a8cda466aad1cbdcc0 234 PRINTS PR01217 Proline rich extensin signature 90 106 6.6E-9 T 19-04-2016 ALIDE2_RS02520 154ee265fe42c6a8cda466aad1cbdcc0 234 PRINTS PR01217 Proline rich extensin signature 138 163 6.6E-9 T 19-04-2016 ALIDE2_RS02520 154ee265fe42c6a8cda466aad1cbdcc0 234 PRINTS PR01217 Proline rich extensin signature 110 127 6.6E-9 T 19-04-2016 ALIDE2_RS00620 5dc001cf7df4b6c84efe1dfaadeab88b 316 PANTHER PTHR30349 8 277 5.3E-79 T 19-04-2016 ALIDE2_RS00620 5dc001cf7df4b6c84efe1dfaadeab88b 316 Gene3D G3DSA:3.40.190.10 124 241 3.2E-6 T 19-04-2016 ALIDE2_RS00620 5dc001cf7df4b6c84efe1dfaadeab88b 316 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 44 312 3.4E-80 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00620 5dc001cf7df4b6c84efe1dfaadeab88b 316 PIRSF PIRSF017082 2 316 3.5E-90 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00620 5dc001cf7df4b6c84efe1dfaadeab88b 316 PANTHER PTHR30349:SF16 8 277 5.3E-79 T 19-04-2016 ALIDE2_RS00620 5dc001cf7df4b6c84efe1dfaadeab88b 316 SUPERFAMILY SSF53850 25 269 7.95E-14 T 19-04-2016 ALIDE2_RS08725 a700cdda1634395c90e8b3cdd897cea2 182 Pfam PF11358 Protein of unknown function (DUF3158) 14 167 8.9E-73 T 19-04-2016 IPR021502 Protein of unknown function DUF3158 ALIDE2_RS23415 385b761e403e3dbbe6a29d557ea44b6c 213 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 19 198 1.5E-27 T 19-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related ALIDE2_RS23415 385b761e403e3dbbe6a29d557ea44b6c 213 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 15 198 8.4E-49 T 19-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 ALIDE2_RS18430 2c89d6f41080365723fb7ccb329826ca 348 Pfam PF06574 FAD synthetase 13 171 4.1E-48 T 19-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 ALIDE2_RS18430 2c89d6f41080365723fb7ccb329826ca 348 SUPERFAMILY SSF52374 16 180 8.94E-31 T 19-04-2016 ALIDE2_RS18430 2c89d6f41080365723fb7ccb329826ca 348 Gene3D G3DSA:2.40.30.30 190 342 2.8E-30 T 19-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 ALIDE2_RS18430 2c89d6f41080365723fb7ccb329826ca 348 Pfam PF01687 Riboflavin kinase 188 331 1.0E-26 T 19-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 ALIDE2_RS18430 2c89d6f41080365723fb7ccb329826ca 348 PANTHER PTHR22749 1 331 1.4E-100 T 19-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 ALIDE2_RS18430 2c89d6f41080365723fb7ccb329826ca 348 SUPERFAMILY SSF82114 178 339 1.42E-30 T 19-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 ALIDE2_RS18430 2c89d6f41080365723fb7ccb329826ca 348 PIRSF PIRSF004491 1 339 5.0E-81 T 19-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 ALIDE2_RS18430 2c89d6f41080365723fb7ccb329826ca 348 SMART SM00904 187 332 1.3E-46 T 19-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 ALIDE2_RS18430 2c89d6f41080365723fb7ccb329826ca 348 PANTHER PTHR22749:SF0 1 331 1.4E-100 T 19-04-2016 ALIDE2_RS18430 2c89d6f41080365723fb7ccb329826ca 348 Gene3D G3DSA:3.40.50.620 3 189 1.4E-61 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS18430 2c89d6f41080365723fb7ccb329826ca 348 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 17 331 9.7E-72 T 19-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 ALIDE2_RS03085 cd68c10cf0dde5d580b9a76fe1a03884 337 Pfam PF05137 Fimbrial assembly protein (PilN) 255 325 8.7E-6 T 19-04-2016 IPR007813 Fimbrial assembly PilN ALIDE2_RS11475 f1a295a44ed9e4fbc61d174328f02cd2 277 SUPERFAMILY SSF55486 44 269 1.25E-32 T 19-04-2016 ALIDE2_RS11475 f1a295a44ed9e4fbc61d174328f02cd2 277 Gene3D G3DSA:3.40.390.10 39 267 9.3E-28 T 19-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 ALIDE2_RS11475 f1a295a44ed9e4fbc61d174328f02cd2 277 PANTHER PTHR30164 7 269 7.1E-53 T 19-04-2016 ALIDE2_RS11475 f1a295a44ed9e4fbc61d174328f02cd2 277 Pfam PF06167 Glucose-regulated metallo-peptidase M90 11 269 4.3E-83 T 19-04-2016 IPR010384 MtfA family ALIDE2_RS11640 3a5f82f8b65666e519bd8309598eac14 233 SUPERFAMILY SSF47616 78 208 2.18E-36 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS11640 3a5f82f8b65666e519bd8309598eac14 233 Gene3D G3DSA:1.20.1050.10 84 201 1.3E-49 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS11640 3a5f82f8b65666e519bd8309598eac14 233 SUPERFAMILY SSF52833 1 84 2.6E-22 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS11640 3a5f82f8b65666e519bd8309598eac14 233 PANTHER PTHR11260 2 209 6.0E-67 T 19-04-2016 ALIDE2_RS11640 3a5f82f8b65666e519bd8309598eac14 233 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 80 3.2E-14 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ALIDE2_RS11640 3a5f82f8b65666e519bd8309598eac14 233 Gene3D G3DSA:3.40.30.10 1 83 1.2E-27 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS11640 3a5f82f8b65666e519bd8309598eac14 233 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 197 6.9E-10 T 19-04-2016 IPR004046 Glutathione S-transferase, C-terminal ALIDE2_RS11640 3a5f82f8b65666e519bd8309598eac14 233 PANTHER PTHR11260:SF178 2 209 6.0E-67 T 19-04-2016 ALIDE2_RS01940 3719294c589e39c0cf8d11c6359122e2 177 PANTHER PTHR30373:SF3 26 176 6.1E-49 T 19-04-2016 ALIDE2_RS01940 3719294c589e39c0cf8d11c6359122e2 177 PANTHER PTHR30373 26 176 6.1E-49 T 19-04-2016 ALIDE2_RS01940 3719294c589e39c0cf8d11c6359122e2 177 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 29 149 1.7E-12 T 19-04-2016 IPR007621 TPM domain ALIDE2_RS04350 de21f2f6823950ca7b951ce80ba8350f 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 5.4E-19 T 19-04-2016 IPR003004 GspF/PilC family ALIDE2_RS04350 de21f2f6823950ca7b951ce80ba8350f 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 5.4E-19 T 19-04-2016 IPR003004 GspF/PilC family ALIDE2_RS04350 de21f2f6823950ca7b951ce80ba8350f 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 5.4E-19 T 19-04-2016 IPR003004 GspF/PilC family ALIDE2_RS04350 de21f2f6823950ca7b951ce80ba8350f 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 5.4E-19 T 19-04-2016 IPR003004 GspF/PilC family ALIDE2_RS04350 de21f2f6823950ca7b951ce80ba8350f 405 PANTHER PTHR30012 13 405 1.5E-155 T 19-04-2016 ALIDE2_RS04350 de21f2f6823950ca7b951ce80ba8350f 405 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 1.1E-28 T 19-04-2016 IPR018076 Type II secretion system F domain ALIDE2_RS04350 de21f2f6823950ca7b951ce80ba8350f 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 2.1E-32 T 19-04-2016 IPR018076 Type II secretion system F domain ALIDE2_RS04350 de21f2f6823950ca7b951ce80ba8350f 405 PANTHER PTHR30012:SF0 13 405 1.5E-155 T 19-04-2016 ALIDE2_RS02605 ec1cf02b67af3d30a933e41a2d06e5e6 212 SUPERFAMILY SSF50475 2 197 7.36E-46 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 ALIDE2_RS02605 ec1cf02b67af3d30a933e41a2d06e5e6 212 Pfam PF01613 Flavin reductase like domain 25 166 3.6E-18 T 19-04-2016 IPR002563 Flavin reductase like domain GO:0010181 ALIDE2_RS02605 ec1cf02b67af3d30a933e41a2d06e5e6 212 PANTHER PTHR33798 10 197 6.1E-64 T 19-04-2016 ALIDE2_RS02605 ec1cf02b67af3d30a933e41a2d06e5e6 212 PANTHER PTHR33798:SF1 10 197 6.1E-64 T 19-04-2016 ALIDE2_RS02605 ec1cf02b67af3d30a933e41a2d06e5e6 212 Gene3D G3DSA:2.30.110.10 15 189 2.4E-56 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 ALIDE2_RS02605 ec1cf02b67af3d30a933e41a2d06e5e6 212 SMART SM00903 22 173 2.4E-25 T 19-04-2016 IPR002563 Flavin reductase like domain GO:0010181 ALIDE2_RS17565 bca4e1b5d3c7188e8e83b16ffd848433 69 Pfam PF11160 Protein of unknown function (DUF2945) 8 67 3.9E-24 T 19-04-2016 IPR021331 Protein of unknown function DUF2945 ALIDE2_RS21815 5c36a5b6c8599e15850f9924a2bc4220 662 Pfam PF10136 Site-specific recombinase 23 657 1.0E-236 T 19-04-2016 IPR011385 Site-specific recombinase Gcr ALIDE2_RS21815 5c36a5b6c8599e15850f9924a2bc4220 662 PIRSF PIRSF015380 2 661 3.7E-181 T 19-04-2016 IPR011385 Site-specific recombinase Gcr ALIDE2_RS14390 3894f0f8f56b6e0da53f430c687cadb5 257 PANTHER PTHR23417:SF14 41 257 1.0E-67 T 19-04-2016 ALIDE2_RS14390 3894f0f8f56b6e0da53f430c687cadb5 257 Pfam PF02390 Putative methyltransferase 85 252 1.8E-53 T 19-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 ALIDE2_RS14390 3894f0f8f56b6e0da53f430c687cadb5 257 SUPERFAMILY SSF53335 37 256 1.36E-45 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS14390 3894f0f8f56b6e0da53f430c687cadb5 257 Gene3D G3DSA:3.40.50.150 77 238 8.4E-19 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS14390 3894f0f8f56b6e0da53f430c687cadb5 257 PANTHER PTHR23417 41 257 1.0E-67 T 19-04-2016 ALIDE2_RS14390 3894f0f8f56b6e0da53f430c687cadb5 257 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 45 257 29.478 T 19-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 ALIDE2_RS14390 3894f0f8f56b6e0da53f430c687cadb5 257 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 74 256 2.5E-53 T 19-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 Gene3D G3DSA:1.10.287.130 124 190 2.8E-15 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 Pfam PF00512 His Kinase A (phospho-acceptor) domain 134 193 4.5E-15 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 Gene3D G3DSA:3.30.450.20 12 102 2.0E-8 T 19-04-2016 ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 PANTHER PTHR24423 12 355 1.9E-79 T 19-04-2016 ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 SUPERFAMILY SSF47384 118 194 3.53E-16 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 SUPERFAMILY SSF55874 201 354 2.75E-32 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 355 5.3E-15 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 SMART SM00387 237 356 2.8E-25 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 SUPERFAMILY SSF55785 12 99 4.51E-7 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 PANTHER PTHR24423:SF488 12 355 1.9E-79 T 19-04-2016 ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 303 3.2E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 354 3.2E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 336 3.2E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 307 317 3.2E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 Gene3D G3DSA:3.30.565.10 200 355 8.5E-34 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS07165 d0142543a98b2ef49b2fd67cb20309fb 356 SMART SM00388 132 197 7.8E-17 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SUPERFAMILY SSF48452 778 908 2.66E-16 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 Pfam PF14559 Tetratricopeptide repeat 858 909 1.4E-7 T 19-04-2016 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 Pfam PF14559 Tetratricopeptide repeat 314 360 3.4E-6 T 19-04-2016 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 Gene3D G3DSA:1.25.40.10 443 695 1.2E-35 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 Gene3D G3DSA:1.25.40.10 178 428 4.2E-36 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 Gene3D G3DSA:1.25.40.10 696 904 3.6E-24 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 Pfam PF13432 Tetratricopeptide repeat 36 91 3.3E-7 T 19-04-2016 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 Pfam PF13432 Tetratricopeptide repeat 244 302 6.8E-5 T 19-04-2016 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 Pfam PF13432 Tetratricopeptide repeat 582 643 5.7E-5 T 19-04-2016 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 Pfam PF13432 Tetratricopeptide repeat 377 432 0.012 T 19-04-2016 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 Pfam PF13432 Tetratricopeptide repeat 520 575 3.6E-6 T 19-04-2016 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 Pfam PF13432 Tetratricopeptide repeat 171 233 5.7E-6 T 19-04-2016 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 Pfam PF13432 Tetratricopeptide repeat 443 504 1.6E-4 T 19-04-2016 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SUPERFAMILY SSF48452 36 187 1.32E-12 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 Gene3D G3DSA:1.25.40.10 30 92 1.9E-13 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 Gene3D G3DSA:1.25.40.10 128 177 1.9E-13 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 13 907 6.8E-219 T 19-04-2016 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SMART SM00028 200 234 31.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SMART SM00028 779 812 140.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SMART SM00028 63 96 110.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SMART SM00028 711 744 27.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SMART SM00028 643 676 57.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SMART SM00028 303 336 43.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SMART SM00028 29 62 240.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SMART SM00028 506 539 350.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SMART SM00028 472 505 21.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SMART SM00028 269 302 15.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SMART SM00028 813 845 200.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SMART SM00028 132 165 67.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SMART SM00028 609 642 20.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SMART SM00028 371 404 0.47 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 PANTHER PTHR23083 791 903 4.5E-49 T 19-04-2016 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 PANTHER PTHR23083 255 404 4.5E-49 T 19-04-2016 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 PANTHER PTHR23083 438 546 4.5E-49 T 19-04-2016 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 PANTHER PTHR23083 582 722 4.5E-49 T 19-04-2016 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 PANTHER PTHR23083 6 42 4.5E-49 T 19-04-2016 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SUPERFAMILY SSF48452 431 708 9.7E-25 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS03595 62e32aee655fad6a77b892e6367ef666 926 SUPERFAMILY SSF48452 174 429 3.49E-24 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS01665 1522e5aada40a070b6d95df81122ec22 211 Pfam PF01914 MarC family integral membrane protein 6 205 2.8E-50 T 19-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 ALIDE2_RS01665 1522e5aada40a070b6d95df81122ec22 211 PANTHER PTHR33508:SF1 7 211 7.8E-60 T 19-04-2016 ALIDE2_RS01665 1522e5aada40a070b6d95df81122ec22 211 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 201 7.1E-50 T 19-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 ALIDE2_RS01665 1522e5aada40a070b6d95df81122ec22 211 PANTHER PTHR33508 7 211 7.8E-60 T 19-04-2016 ALIDE2_RS00120 315e04124ba421e2977de7d22425e881 724 Pfam PF00270 DEAD/DEAH box helicase 62 105 1.1E-4 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ALIDE2_RS00120 315e04124ba421e2977de7d22425e881 724 Gene3D G3DSA:3.40.50.300 21 140 2.7E-15 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00120 315e04124ba421e2977de7d22425e881 724 Gene3D G3DSA:3.40.50.300 236 279 2.7E-15 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00120 315e04124ba421e2977de7d22425e881 724 Pfam PF13307 Helicase C-terminal domain 557 716 8.9E-27 T 19-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ALIDE2_RS00120 315e04124ba421e2977de7d22425e881 724 SMART SM00487 22 324 1.7E-5 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS00120 315e04124ba421e2977de7d22425e881 724 PANTHER PTHR11472:SF32 1 717 7.6E-151 T 19-04-2016 ALIDE2_RS00120 315e04124ba421e2977de7d22425e881 724 Pfam PF06733 DEAD_2 225 280 1.7E-6 T 19-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 ALIDE2_RS00120 315e04124ba421e2977de7d22425e881 724 SUPERFAMILY SSF52540 480 494 2.97E-19 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00120 315e04124ba421e2977de7d22425e881 724 SUPERFAMILY SSF52540 60 108 2.97E-19 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00120 315e04124ba421e2977de7d22425e881 724 SUPERFAMILY SSF52540 221 293 2.97E-19 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00120 315e04124ba421e2977de7d22425e881 724 SUPERFAMILY SSF52540 527 697 2.97E-19 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00120 315e04124ba421e2977de7d22425e881 724 SMART SM00491 570 703 1.1E-21 T 19-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ALIDE2_RS00120 315e04124ba421e2977de7d22425e881 724 PANTHER PTHR11472 1 717 7.6E-151 T 19-04-2016 ALIDE2_RS21265 13eee86dd58015190ac716121a5b1e4a 326 PANTHER PTHR30349 10 286 8.6E-84 T 19-04-2016 ALIDE2_RS21265 13eee86dd58015190ac716121a5b1e4a 326 PIRSF PIRSF017082 1 324 1.0E-81 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS21265 13eee86dd58015190ac716121a5b1e4a 326 PANTHER PTHR30349:SF32 10 286 8.6E-84 T 19-04-2016 ALIDE2_RS21265 13eee86dd58015190ac716121a5b1e4a 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 311 1.0E-82 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS21265 13eee86dd58015190ac716121a5b1e4a 326 SUPERFAMILY SSF53850 116 281 6.81E-14 T 19-04-2016 ALIDE2_RS14475 3eb517badba9fabbf458f02dd3fbb99d 290 Pfam PF01380 SIS domain 154 279 3.4E-20 T 19-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 ALIDE2_RS14475 3eb517badba9fabbf458f02dd3fbb99d 290 SUPERFAMILY SSF46689 22 94 2.33E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS14475 3eb517badba9fabbf458f02dd3fbb99d 290 Gene3D G3DSA:1.10.10.10 20 83 1.5E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14475 3eb517badba9fabbf458f02dd3fbb99d 290 PANTHER PTHR30514 11 285 2.8E-41 T 19-04-2016 ALIDE2_RS14475 3eb517badba9fabbf458f02dd3fbb99d 290 Pfam PF01418 Helix-turn-helix domain, rpiR family 23 86 1.7E-9 T 19-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 ALIDE2_RS14475 3eb517badba9fabbf458f02dd3fbb99d 290 SUPERFAMILY SSF53697 126 284 2.83E-22 T 19-04-2016 ALIDE2_RS14475 3eb517badba9fabbf458f02dd3fbb99d 290 Gene3D G3DSA:3.40.50.10490 84 285 6.8E-21 T 19-04-2016 ALIDE2_RS14475 3eb517badba9fabbf458f02dd3fbb99d 290 PANTHER PTHR30514:SF3 11 285 2.8E-41 T 19-04-2016 ALIDE2_RS14290 95078b0913c69c2a4a7808ac4a9bfd45 277 Pfam PF05050 Methyltransferase FkbM domain 88 244 2.2E-16 T 19-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- ALIDE2_RS14290 95078b0913c69c2a4a7808ac4a9bfd45 277 Gene3D G3DSA:3.40.50.150 67 256 4.4E-44 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS14290 95078b0913c69c2a4a7808ac4a9bfd45 277 SUPERFAMILY SSF53335 41 249 3.38E-50 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS14290 95078b0913c69c2a4a7808ac4a9bfd45 277 PANTHER PTHR34203:SF2 83 248 3.0E-28 T 19-04-2016 ALIDE2_RS14290 95078b0913c69c2a4a7808ac4a9bfd45 277 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 85 219 1.1E-29 T 19-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- ALIDE2_RS14290 95078b0913c69c2a4a7808ac4a9bfd45 277 PANTHER PTHR34203 83 248 3.0E-28 T 19-04-2016 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 PANTHER PTHR20854 1 280 8.8E-106 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 19-04-2016 IPR020583 Inositol monophosphatase, metal-binding site ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 1.5E-60 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 1.5E-60 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 1.5E-60 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 PRINTS PR00377 Inositol monophosphatase superfamily signature 182 203 1.5E-60 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 1.5E-60 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 PRINTS PR00377 Inositol monophosphatase superfamily signature 135 158 1.5E-60 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 SUPERFAMILY SSF56655 2 267 2.36E-86 T 19-04-2016 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 Pfam PF00459 Inositol monophosphatase family 5 260 8.1E-68 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 Gene3D G3DSA:3.30.540.10 4 155 6.1E-56 T 19-04-2016 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 216 230 - T 19-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 PANTHER PTHR20854:SF4 1 280 8.8E-106 T 19-04-2016 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 PRINTS PR01959 SuhB family inositol monophosphatase signature 161 187 1.0E-26 T 19-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 PRINTS PR01959 SuhB family inositol monophosphatase signature 203 215 1.0E-26 T 19-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 PRINTS PR01959 SuhB family inositol monophosphatase signature 21 43 1.0E-26 T 19-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 PRINTS PR01959 SuhB family inositol monophosphatase signature 109 128 1.0E-26 T 19-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 ALIDE2_RS18660 bd6c4a5da2c2c4c4b33adaeb85427f6c 317 Gene3D G3DSA:3.40.190.80 156 265 2.1E-34 T 19-04-2016 ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 Gene3D G3DSA:3.90.100.10 635 759 1.1E-36 T 19-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 392 406 - T 19-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 Gene3D G3DSA:3.40.640.10 149 456 1.4E-110 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 SUPERFAMILY SSF55904 613 759 1.31E-42 T 19-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 PIRSF PIRSF009393 1 760 4.7E-271 T 19-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 SUPERFAMILY SSF53383 149 610 1.15E-111 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 143 4.6E-37 T 19-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 PANTHER PTHR11751 150 495 6.6E-140 T 19-04-2016 ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 PANTHER PTHR11751 530 538 6.6E-140 T 19-04-2016 ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 PANTHER PTHR11751 558 678 6.6E-140 T 19-04-2016 ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 618 742 2.1E-46 T 19-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 PANTHER PTHR11751:SF406 150 495 6.6E-140 T 19-04-2016 ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 PANTHER PTHR11751:SF406 530 538 6.6E-140 T 19-04-2016 ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 PANTHER PTHR11751:SF406 558 678 6.6E-140 T 19-04-2016 ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 149 591 3.8E-146 T 19-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 ALIDE2_RS15130 5a4312c6b204ca5c954c86634f0affe5 786 Gene3D G3DSA:3.90.1150.10 460 634 2.5E-67 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS04670 70cd3672f61db45e679c731a31c0bbdf 468 Gene3D G3DSA:3.90.1300.10 4 463 8.1E-120 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS04670 70cd3672f61db45e679c731a31c0bbdf 468 Pfam PF01425 Amidase 25 445 1.5E-85 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS04670 70cd3672f61db45e679c731a31c0bbdf 468 SUPERFAMILY SSF75304 4 462 1.31E-121 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS04670 70cd3672f61db45e679c731a31c0bbdf 468 PANTHER PTHR11895 6 462 1.4E-119 T 19-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS20960 7af2f57f58a89f486d86d88da7cf3037 134 Pfam PF00460 Flagella basal body rod protein 7 36 6.2E-9 T 19-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ALIDE2_RS20960 7af2f57f58a89f486d86d88da7cf3037 134 PANTHER PTHR30435 1 134 3.2E-57 T 19-04-2016 ALIDE2_RS20960 7af2f57f58a89f486d86d88da7cf3037 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 132 7.1E-13 T 19-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ALIDE2_RS20960 7af2f57f58a89f486d86d88da7cf3037 134 PANTHER PTHR30435:SF2 1 134 3.2E-57 T 19-04-2016 ALIDE2_RS20960 7af2f57f58a89f486d86d88da7cf3037 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 1.6E-48 T 19-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 ALIDE2_RS19880 cf7514965ecd84d6df7b8cc30c8c4f94 119 PANTHER PTHR11058:SF10 3 119 2.0E-66 T 19-04-2016 ALIDE2_RS19880 cf7514965ecd84d6df7b8cc30c8c4f94 119 PANTHER PTHR11058 3 119 2.0E-66 T 19-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 ALIDE2_RS19880 cf7514965ecd84d6df7b8cc30c8c4f94 119 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 2 119 20.877 T 19-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 ALIDE2_RS19880 cf7514965ecd84d6df7b8cc30c8c4f94 119 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 118 5.2E-40 T 19-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 ALIDE2_RS19510 eb07db6e70776b5a8a2b8d75b5cf156c 331 PANTHER PTHR30349 3 289 1.1E-83 T 19-04-2016 ALIDE2_RS19510 eb07db6e70776b5a8a2b8d75b5cf156c 331 SUPERFAMILY SSF53850 121 289 3.53E-13 T 19-04-2016 ALIDE2_RS19510 eb07db6e70776b5a8a2b8d75b5cf156c 331 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 325 1.3E-88 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS19510 eb07db6e70776b5a8a2b8d75b5cf156c 331 PANTHER PTHR30349:SF32 3 289 1.1E-83 T 19-04-2016 ALIDE2_RS19510 eb07db6e70776b5a8a2b8d75b5cf156c 331 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 25 9.7E-4 T 19-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ALIDE2_RS19510 eb07db6e70776b5a8a2b8d75b5cf156c 331 Gene3D G3DSA:3.40.190.10 135 236 7.5E-6 T 19-04-2016 ALIDE2_RS19510 eb07db6e70776b5a8a2b8d75b5cf156c 331 PIRSF PIRSF017082 1 330 1.3E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS11780 ca1e78b2c2ea584c99236eb21acb7e2d 377 PANTHER PTHR30483 1 372 5.8E-80 T 19-04-2016 ALIDE2_RS11780 ca1e78b2c2ea584c99236eb21acb7e2d 377 Gene3D G3DSA:3.40.50.2300 28 229 1.2E-66 T 19-04-2016 ALIDE2_RS11780 ca1e78b2c2ea584c99236eb21acb7e2d 377 Pfam PF13458 Periplasmic binding protein 28 372 2.1E-59 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS11780 ca1e78b2c2ea584c99236eb21acb7e2d 377 PANTHER PTHR30483:SF20 1 372 5.8E-80 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS11780 ca1e78b2c2ea584c99236eb21acb7e2d 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 28 44 1.7E-6 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS11780 ca1e78b2c2ea584c99236eb21acb7e2d 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 50 66 1.7E-6 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS11780 ca1e78b2c2ea584c99236eb21acb7e2d 377 SUPERFAMILY SSF53822 28 373 3.3E-92 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS04960 efdd9d71f5203b5e3d1b265ee46536b2 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 444 8.4E-6 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS04960 efdd9d71f5203b5e3d1b265ee46536b2 447 Pfam PF05227 CHASE3 domain 41 171 1.2E-35 T 19-04-2016 IPR007891 CHASE3 ALIDE2_RS04960 efdd9d71f5203b5e3d1b265ee46536b2 447 PANTHER PTHR24421:SF1 2 9 1.3E-34 T 19-04-2016 ALIDE2_RS04960 efdd9d71f5203b5e3d1b265ee46536b2 447 PANTHER PTHR24421:SF1 245 443 1.3E-34 T 19-04-2016 ALIDE2_RS04960 efdd9d71f5203b5e3d1b265ee46536b2 447 Pfam PF07730 Histidine kinase 250 317 5.7E-12 T 19-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ALIDE2_RS04960 efdd9d71f5203b5e3d1b265ee46536b2 447 SUPERFAMILY SSF55874 323 443 1.44E-17 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS04960 efdd9d71f5203b5e3d1b265ee46536b2 447 Gene3D G3DSA:3.30.565.10 331 443 1.3E-7 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS04960 efdd9d71f5203b5e3d1b265ee46536b2 447 SMART SM00387 353 446 1.9E-4 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS04960 efdd9d71f5203b5e3d1b265ee46536b2 447 PANTHER PTHR24421 2 9 1.3E-34 T 19-04-2016 ALIDE2_RS04960 efdd9d71f5203b5e3d1b265ee46536b2 447 PANTHER PTHR24421 245 443 1.3E-34 T 19-04-2016 ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 Gene3D G3DSA:3.30.1330.10 220 425 1.3E-37 T 19-04-2016 IPR016188 PurM-like, N-terminal domain ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 Gene3D G3DSA:3.30.1330.10 653 816 7.5E-15 T 19-04-2016 IPR016188 PurM-like, N-terminal domain ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 PANTHER PTHR10099:SF5 951 1339 0.0 T 19-04-2016 ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 SUPERFAMILY SSF52317 1080 1338 3.06E-87 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 SUPERFAMILY SSF56042 436 663 4.49E-50 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 PANTHER PTHR10099:SF5 4 926 0.0 T 19-04-2016 ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 SUPERFAMILY SSF55326 630 823 2.62E-64 T 19-04-2016 ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 SUPERFAMILY SSF109736 164 229 2.88E-21 T 19-04-2016 ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 Gene3D G3DSA:3.40.50.880 1084 1304 2.6E-12 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 8 1338 0.0 T 19-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 5 1339 20.119 T 19-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 SUPERFAMILY SSF56042 828 922 1.94E-44 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 SUPERFAMILY SSF56042 951 1078 1.94E-44 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 SUPERFAMILY SSF55326 230 429 2.02E-53 T 19-04-2016 ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1083 1338 1.2E-97 T 19-04-2016 ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 SUPERFAMILY SSF82697 5 160 8.37E-37 T 19-04-2016 ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 Pfam PF02769 AIR synthase related protein, C-terminal domain 436 592 6.3E-27 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 Pfam PF02769 AIR synthase related protein, C-terminal domain 840 995 3.1E-13 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 SMART SM01211 1083 1338 2.5E-135 T 19-04-2016 ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 PANTHER PTHR10099 4 926 0.0 T 19-04-2016 ALIDE2_RS14545 f583c777364f3d83139845dd89d18528 1339 PANTHER PTHR10099 951 1339 0.0 T 19-04-2016 ALIDE2_RS04975 ddf26e0ec6360a09bec5a1cb9b273ee6 254 SUPERFAMILY SSF69572 2 248 4.05E-87 T 19-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ALIDE2_RS04975 ddf26e0ec6360a09bec5a1cb9b273ee6 254 Gene3D G3DSA:3.40.50.720 3 247 9.1E-76 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04975 ddf26e0ec6360a09bec5a1cb9b273ee6 254 PANTHER PTHR10953 1 247 3.7E-94 T 19-04-2016 ALIDE2_RS04975 ddf26e0ec6360a09bec5a1cb9b273ee6 254 PANTHER PTHR10953:SF158 1 247 3.7E-94 T 19-04-2016 ALIDE2_RS04975 ddf26e0ec6360a09bec5a1cb9b273ee6 254 Pfam PF00899 ThiF family 9 243 3.4E-63 T 19-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ALIDE2_RS09230 540fdb57c07022b86aaae38ab9af9ec2 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 319 2.4E-71 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS09230 540fdb57c07022b86aaae38ab9af9ec2 324 SUPERFAMILY SSF53850 128 280 9.87E-9 T 19-04-2016 ALIDE2_RS09230 540fdb57c07022b86aaae38ab9af9ec2 324 PANTHER PTHR30349:SF1 1 288 6.8E-75 T 19-04-2016 ALIDE2_RS09230 540fdb57c07022b86aaae38ab9af9ec2 324 PIRSF PIRSF017082 1 322 4.2E-71 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS09230 540fdb57c07022b86aaae38ab9af9ec2 324 PANTHER PTHR30349 1 288 6.8E-75 T 19-04-2016 ALIDE2_RS05200 1010641e3def55e8448da6dd181c8ae4 409 Pfam PF02515 CoA-transferase family III 21 386 5.7E-116 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS05200 1010641e3def55e8448da6dd181c8ae4 409 PANTHER PTHR24023:SF593 88 396 1.7E-14 T 19-04-2016 ALIDE2_RS05200 1010641e3def55e8448da6dd181c8ae4 409 Gene3D G3DSA:3.30.1540.10 245 323 3.8E-28 T 19-04-2016 ALIDE2_RS05200 1010641e3def55e8448da6dd181c8ae4 409 Gene3D G3DSA:3.40.50.10540 19 234 1.3E-93 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS05200 1010641e3def55e8448da6dd181c8ae4 409 Gene3D G3DSA:3.40.50.10540 324 409 1.3E-93 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS05200 1010641e3def55e8448da6dd181c8ae4 409 PANTHER PTHR24023 88 396 1.7E-14 T 19-04-2016 ALIDE2_RS05200 1010641e3def55e8448da6dd181c8ae4 409 SUPERFAMILY SSF89796 18 409 4.06E-114 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS12310 2bc6cb637a22f860de3f0e30b5a3f360 352 Gene3D G3DSA:3.30.460.10 44 168 3.4E-18 T 19-04-2016 ALIDE2_RS12310 2bc6cb637a22f860de3f0e30b5a3f360 352 Pfam PF04607 Region found in RelA / SpoT proteins 53 185 2.2E-19 T 19-04-2016 IPR007685 RelA/SpoT GO:0015969 ALIDE2_RS12310 2bc6cb637a22f860de3f0e30b5a3f360 352 Gene3D G3DSA:1.10.287.860 171 215 4.8E-12 T 19-04-2016 ALIDE2_RS12310 2bc6cb637a22f860de3f0e30b5a3f360 352 SMART SM00954 53 188 6.4E-20 T 19-04-2016 IPR007685 RelA/SpoT GO:0015969 ALIDE2_RS12310 2bc6cb637a22f860de3f0e30b5a3f360 352 SUPERFAMILY SSF81301 16 213 5.07E-32 T 19-04-2016 ALIDE2_RS10860 31ec9cdca5f9c790ab72cc6188bf5d2a 195 SUPERFAMILY SSF51306 53 190 1.2E-20 T 19-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C ALIDE2_RS10860 31ec9cdca5f9c790ab72cc6188bf5d2a 195 Gene3D G3DSA:2.10.109.10 71 115 3.2E-9 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS10860 31ec9cdca5f9c790ab72cc6188bf5d2a 195 Gene3D G3DSA:2.10.109.10 153 192 3.2E-9 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS10860 31ec9cdca5f9c790ab72cc6188bf5d2a 195 Pfam PF10502 Signal peptidase, peptidase S26 46 191 2.3E-52 T 19-04-2016 IPR019533 Peptidase S26 ALIDE2_RS21515 ac9bc1f3e49103286f2e6457c4019025 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 308 6.1E-40 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS21515 ac9bc1f3e49103286f2e6457c4019025 314 PANTHER PTHR32196:SF21 23 314 7.9E-76 T 19-04-2016 ALIDE2_RS21515 ac9bc1f3e49103286f2e6457c4019025 314 PANTHER PTHR32196 23 314 7.9E-76 T 19-04-2016 ALIDE2_RS04435 7633b8a973f2a209725420bba9334db3 103 SUPERFAMILY SSF141091 1 101 2.35E-37 T 19-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 ALIDE2_RS04435 7633b8a973f2a209725420bba9334db3 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.445 T 19-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS04435 7633b8a973f2a209725420bba9334db3 103 PANTHER PTHR21349 1 102 6.8E-41 T 19-04-2016 ALIDE2_RS04435 7633b8a973f2a209725420bba9334db3 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.3E-36 T 19-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS04435 7633b8a973f2a209725420bba9334db3 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 3.2E-40 T 19-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 ALIDE2_RS04435 7633b8a973f2a209725420bba9334db3 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 19-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS02040 11abb8b504727eda042b9ba5dd0387fa 168 PANTHER PTHR11560 3 155 8.6E-46 T 19-04-2016 ALIDE2_RS02040 11abb8b504727eda042b9ba5dd0387fa 168 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 26.147 T 19-04-2016 IPR022973 Ribosomal protein L10 ALIDE2_RS02040 11abb8b504727eda042b9ba5dd0387fa 168 Pfam PF00466 Ribosomal protein L10 4 100 5.2E-23 T 19-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 ALIDE2_RS02040 11abb8b504727eda042b9ba5dd0387fa 168 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 19-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS02040 11abb8b504727eda042b9ba5dd0387fa 168 SUPERFAMILY SSF160369 4 159 4.32E-48 T 19-04-2016 ALIDE2_RS19200 97b80100daef80829acbf3241ff8e6b8 449 Pfam PF07044 Protein of unknown function (DUF1329) 84 443 1.5E-134 T 19-04-2016 IPR010752 Protein of unknown function DUF1329 ALIDE2_RS19200 97b80100daef80829acbf3241ff8e6b8 449 Gene3D G3DSA:2.50.20.10 159 305 1.4E-40 T 19-04-2016 ALIDE2_RS19200 97b80100daef80829acbf3241ff8e6b8 449 Gene3D G3DSA:2.50.20.10 337 444 1.4E-40 T 19-04-2016 ALIDE2_RS18915 a8d112837dcce234798268c79e13a26b 286 Gene3D G3DSA:3.30.1150.10 174 279 1.9E-15 T 19-04-2016 ALIDE2_RS18915 a8d112837dcce234798268c79e13a26b 286 SUPERFAMILY SSF74653 164 278 7.72E-17 T 19-04-2016 ALIDE2_RS18915 a8d112837dcce234798268c79e13a26b 286 Pfam PF13103 TonB C terminal 183 255 1.2E-6 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 ALIDE2_RS18915 a8d112837dcce234798268c79e13a26b 286 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 202 276 9.6E-9 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 ALIDE2_RS11615 b33e7c331addefcdd87e29ff0c0bc8ad 336 PIRSF PIRSF000267 2 336 9.1E-92 T 19-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ALIDE2_RS11615 b33e7c331addefcdd87e29ff0c0bc8ad 336 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 325 9.5E-101 T 19-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ALIDE2_RS11615 b33e7c331addefcdd87e29ff0c0bc8ad 336 PANTHER PTHR30365 1 336 1.6E-163 T 19-04-2016 ALIDE2_RS11615 b33e7c331addefcdd87e29ff0c0bc8ad 336 PANTHER PTHR30365:SF4 1 336 1.6E-163 T 19-04-2016 ALIDE2_RS11615 b33e7c331addefcdd87e29ff0c0bc8ad 336 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 215 5.3E-48 T 19-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ALIDE2_RS07590 e4d54a90940729697349828da2029fa9 393 Pfam PF02515 CoA-transferase family III 4 370 6.3E-105 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS07590 e4d54a90940729697349828da2029fa9 393 PANTHER PTHR24023:SF593 34 380 4.3E-26 T 19-04-2016 ALIDE2_RS07590 e4d54a90940729697349828da2029fa9 393 Gene3D G3DSA:3.30.1540.10 221 301 2.7E-22 T 19-04-2016 ALIDE2_RS07590 e4d54a90940729697349828da2029fa9 393 PANTHER PTHR24023 34 380 4.3E-26 T 19-04-2016 ALIDE2_RS07590 e4d54a90940729697349828da2029fa9 393 SUPERFAMILY SSF89796 1 393 5.23E-116 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07590 e4d54a90940729697349828da2029fa9 393 Gene3D G3DSA:3.40.50.10540 302 393 1.5E-96 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07590 e4d54a90940729697349828da2029fa9 393 Gene3D G3DSA:3.40.50.10540 2 213 1.5E-96 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS21625 e322503bf64f14d207ae989a0bdf836c 177 PIRSF PIRSF002162 1 177 2.3E-47 T 19-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS21625 e322503bf64f14d207ae989a0bdf836c 177 SUPERFAMILY SSF56053 1 82 8.51E-24 T 19-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS21625 e322503bf64f14d207ae989a0bdf836c 177 PANTHER PTHR11655 1 176 3.5E-82 T 19-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS21625 e322503bf64f14d207ae989a0bdf836c 177 Gene3D G3DSA:3.90.930.12 2 82 4.3E-28 T 19-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS21625 e322503bf64f14d207ae989a0bdf836c 177 PANTHER PTHR11655:SF14 1 176 3.5E-82 T 19-04-2016 ALIDE2_RS21625 e322503bf64f14d207ae989a0bdf836c 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.8E-72 T 19-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS21625 e322503bf64f14d207ae989a0bdf836c 177 SUPERFAMILY SSF56053 83 177 6.15E-34 T 19-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS21625 e322503bf64f14d207ae989a0bdf836c 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.1E-33 T 19-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS21625 e322503bf64f14d207ae989a0bdf836c 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.1E-33 T 19-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS21625 e322503bf64f14d207ae989a0bdf836c 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.1E-33 T 19-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS21625 e322503bf64f14d207ae989a0bdf836c 177 Pfam PF00347 Ribosomal protein L6 11 82 4.2E-15 T 19-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS21625 e322503bf64f14d207ae989a0bdf836c 177 Pfam PF00347 Ribosomal protein L6 90 164 4.1E-18 T 19-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS21625 e322503bf64f14d207ae989a0bdf836c 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.873 T 19-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS21625 e322503bf64f14d207ae989a0bdf836c 177 Gene3D G3DSA:3.90.930.12 83 177 1.6E-38 T 19-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 ALIDE2_RS21625 e322503bf64f14d207ae989a0bdf836c 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 19-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS12020 cc64f3ae7dec68fd7a73fb51258a09c8 213 Pfam PF13511 Domain of unknown function (DUF4124) 13 56 4.3E-9 T 19-04-2016 IPR025392 Domain of unknown function DUF4124 ALIDE2_RS12020 cc64f3ae7dec68fd7a73fb51258a09c8 213 Pfam PF00462 Glutaredoxin 77 126 3.1E-6 T 19-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ALIDE2_RS12020 cc64f3ae7dec68fd7a73fb51258a09c8 213 Gene3D G3DSA:3.40.30.10 76 152 1.0E-14 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS12020 cc64f3ae7dec68fd7a73fb51258a09c8 213 SUPERFAMILY SSF52833 76 148 1.47E-10 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS12140 d786bdc090050af582e39b49b73086b6 168 Gene3D G3DSA:3.10.590.10 9 156 3.3E-27 T 19-04-2016 IPR002740 EVE domain ALIDE2_RS12140 d786bdc090050af582e39b49b73086b6 168 PANTHER PTHR14087 8 156 1.1E-67 T 19-04-2016 ALIDE2_RS12140 d786bdc090050af582e39b49b73086b6 168 SUPERFAMILY SSF88697 8 156 4.97E-56 T 19-04-2016 IPR015947 PUA-like domain ALIDE2_RS12140 d786bdc090050af582e39b49b73086b6 168 Pfam PF01878 EVE domain 9 155 2.4E-50 T 19-04-2016 IPR002740 EVE domain ALIDE2_RS16795 5170d0d80a3df329359ceb076864790b 83 SUPERFAMILY SSF55874 2 72 2.33E-20 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS16795 5170d0d80a3df329359ceb076864790b 83 SMART SM00387 1 75 0.0056 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS16795 5170d0d80a3df329359ceb076864790b 83 PANTHER PTHR24423 2 72 1.2E-20 T 19-04-2016 ALIDE2_RS16795 5170d0d80a3df329359ceb076864790b 83 Gene3D G3DSA:3.30.565.10 2 78 6.8E-21 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS16795 5170d0d80a3df329359ceb076864790b 83 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1 72 4.4E-12 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS16795 5170d0d80a3df329359ceb076864790b 83 PRINTS PR00344 Bacterial sensor protein C-terminal signature 18 28 3.0E-8 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS16795 5170d0d80a3df329359ceb076864790b 83 PRINTS PR00344 Bacterial sensor protein C-terminal signature 36 54 3.0E-8 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS16795 5170d0d80a3df329359ceb076864790b 83 PANTHER PTHR24423:SF354 2 72 1.2E-20 T 19-04-2016 ALIDE2_RS14150 395ae17952d561d62ab2eeb31c6c435c 275 Pfam PF02146 Sir2 family 27 201 5.5E-44 T 19-04-2016 IPR003000 Sirtuin family GO:0070403 ALIDE2_RS14150 395ae17952d561d62ab2eeb31c6c435c 275 SUPERFAMILY SSF52467 5 249 2.55E-77 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS14150 395ae17952d561d62ab2eeb31c6c435c 275 PANTHER PTHR11085 9 247 1.4E-79 T 19-04-2016 IPR003000 Sirtuin family GO:0070403 ALIDE2_RS14150 395ae17952d561d62ab2eeb31c6c435c 275 Gene3D G3DSA:3.40.50.1220 84 126 5.9E-39 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS14150 395ae17952d561d62ab2eeb31c6c435c 275 Gene3D G3DSA:3.40.50.1220 180 246 5.9E-39 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS14150 395ae17952d561d62ab2eeb31c6c435c 275 Gene3D G3DSA:3.40.50.1220 6 35 5.9E-39 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS14150 395ae17952d561d62ab2eeb31c6c435c 275 Gene3D G3DSA:3.30.1600.10 36 76 1.4E-21 T 19-04-2016 IPR026591 Sirtuin family, catalytic core small domain ALIDE2_RS14150 395ae17952d561d62ab2eeb31c6c435c 275 Gene3D G3DSA:3.30.1600.10 127 170 1.4E-21 T 19-04-2016 IPR026591 Sirtuin family, catalytic core small domain ALIDE2_RS14150 395ae17952d561d62ab2eeb31c6c435c 275 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 20 247 54.982 T 19-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 ALIDE2_RS05960 1c4aaeaf2e19419b9a42fcb718fe27d4 144 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 8 31 1.2E-8 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS05960 1c4aaeaf2e19419b9a42fcb718fe27d4 144 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 33 118 1.3E-25 T 19-04-2016 IPR031982 Type IV minor pilin ComP ALIDE2_RS05960 1c4aaeaf2e19419b9a42fcb718fe27d4 144 Gene3D G3DSA:3.30.700.10 12 121 1.1E-17 T 19-04-2016 ALIDE2_RS05960 1c4aaeaf2e19419b9a42fcb718fe27d4 144 PANTHER PTHR30093:SF4 1 60 8.9E-21 T 19-04-2016 ALIDE2_RS05960 1c4aaeaf2e19419b9a42fcb718fe27d4 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 7.0E-11 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS05960 1c4aaeaf2e19419b9a42fcb718fe27d4 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS05960 1c4aaeaf2e19419b9a42fcb718fe27d4 144 PANTHER PTHR30093 1 60 8.9E-21 T 19-04-2016 ALIDE2_RS05960 1c4aaeaf2e19419b9a42fcb718fe27d4 144 SUPERFAMILY SSF54523 12 133 1.2E-27 T 19-04-2016 ALIDE2_RS12810 19dd858d8fa420f0156290897d6e1682 320 Gene3D G3DSA:3.40.50.720 110 289 9.2E-56 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12810 19dd858d8fa420f0156290897d6e1682 320 SUPERFAMILY SSF51735 100 287 9.08E-50 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12810 19dd858d8fa420f0156290897d6e1682 320 SUPERFAMILY SSF52283 1 135 3.02E-34 T 19-04-2016 ALIDE2_RS12810 19dd858d8fa420f0156290897d6e1682 320 PANTHER PTHR10996 1 312 5.4E-90 T 19-04-2016 ALIDE2_RS12810 19dd858d8fa420f0156290897d6e1682 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 286 2.2E-49 T 19-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ALIDE2_RS12810 19dd858d8fa420f0156290897d6e1682 320 Gene3D G3DSA:3.40.50.720 1 109 4.0E-33 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12810 19dd858d8fa420f0156290897d6e1682 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 34 316 2.4E-28 T 19-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS22215 fbeef0c5c286422d9cf5647361475da5 306 PANTHER PTHR11609:SF6 14 305 3.6E-132 T 19-04-2016 ALIDE2_RS22215 fbeef0c5c286422d9cf5647361475da5 306 SUPERFAMILY SSF56104 11 305 1.54E-98 T 19-04-2016 ALIDE2_RS22215 fbeef0c5c286422d9cf5647361475da5 306 PANTHER PTHR11609 14 305 3.6E-132 T 19-04-2016 ALIDE2_RS22215 fbeef0c5c286422d9cf5647361475da5 306 ProSitePatterns PS01058 SAICAR synthetase signature 2. 209 217 - T 19-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 ALIDE2_RS22215 fbeef0c5c286422d9cf5647361475da5 306 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 17 306 25.417 T 19-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 ALIDE2_RS22215 fbeef0c5c286422d9cf5647361475da5 306 ProSitePatterns PS01057 SAICAR synthetase signature 1. 110 124 - T 19-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 ALIDE2_RS22215 fbeef0c5c286422d9cf5647361475da5 306 Gene3D G3DSA:3.30.200.20 9 120 2.0E-44 T 19-04-2016 ALIDE2_RS22215 fbeef0c5c286422d9cf5647361475da5 306 Pfam PF01259 SAICAR synthetase 19 272 6.0E-99 T 19-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 ALIDE2_RS22215 fbeef0c5c286422d9cf5647361475da5 306 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 20 305 2.0E-75 T 19-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 ALIDE2_RS22215 fbeef0c5c286422d9cf5647361475da5 306 Gene3D G3DSA:3.30.470.20 121 246 2.2E-52 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS15655 a1678a9e0315809cbec74e9f2420e5f2 300 PANTHER PTHR30085:SF2 1 291 1.4E-80 T 19-04-2016 ALIDE2_RS15655 a1678a9e0315809cbec74e9f2420e5f2 300 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 264 1.4E-45 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS15655 a1678a9e0315809cbec74e9f2420e5f2 300 Gene3D G3DSA:3.40.190.10 118 225 5.6E-26 T 19-04-2016 ALIDE2_RS15655 a1678a9e0315809cbec74e9f2420e5f2 300 SUPERFAMILY SSF53850 1 266 1.93E-55 T 19-04-2016 ALIDE2_RS15655 a1678a9e0315809cbec74e9f2420e5f2 300 PANTHER PTHR30085 1 291 1.4E-80 T 19-04-2016 ALIDE2_RS15655 a1678a9e0315809cbec74e9f2420e5f2 300 SMART SM00062 33 266 2.2E-41 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS15655 a1678a9e0315809cbec74e9f2420e5f2 300 Gene3D G3DSA:3.40.190.10 30 117 4.5E-25 T 19-04-2016 ALIDE2_RS15655 a1678a9e0315809cbec74e9f2420e5f2 300 Gene3D G3DSA:3.40.190.10 226 267 4.5E-25 T 19-04-2016 ALIDE2_RS14270 0de15bd0373585b9c7e8e095a15db91e 132 Pfam PF07007 Protein of unknown function (DUF1311) 32 118 4.8E-14 T 19-04-2016 IPR009739 Protein of unknown function DUF1311 ALIDE2_RS15985 66605571c6a9798c795f6c0332758117 173 Gene3D G3DSA:3.30.1330.60 74 171 1.1E-16 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS15985 66605571c6a9798c795f6c0332758117 173 SUPERFAMILY SSF103088 74 172 1.57E-15 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS15985 66605571c6a9798c795f6c0332758117 173 PRINTS PR01021 OMPA domain signature 122 138 4.8E-5 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ALIDE2_RS15985 66605571c6a9798c795f6c0332758117 173 PRINTS PR01021 OMPA domain signature 107 122 4.8E-5 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ALIDE2_RS15985 66605571c6a9798c795f6c0332758117 173 PRINTS PR01021 OMPA domain signature 78 100 4.8E-5 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ALIDE2_RS15985 66605571c6a9798c795f6c0332758117 173 Pfam PF00691 OmpA family 77 149 3.4E-11 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS13420 406ba00fce111a92413b7717b81482e7 61 SUPERFAMILY SSF53098 9 59 6.2E-8 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS13420 406ba00fce111a92413b7717b81482e7 61 Gene3D G3DSA:3.30.420.10 7 57 1.4E-6 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS02280 3925d84595c58e70a379a0acd8edf951 298 Gene3D G3DSA:3.40.190.10 186 263 8.0E-16 T 19-04-2016 ALIDE2_RS02280 3925d84595c58e70a379a0acd8edf951 298 PANTHER PTHR30537:SF26 9 298 1.4E-82 T 19-04-2016 ALIDE2_RS02280 3925d84595c58e70a379a0acd8edf951 298 SUPERFAMILY SSF53850 99 297 2.17E-38 T 19-04-2016 ALIDE2_RS02280 3925d84595c58e70a379a0acd8edf951 298 Gene3D G3DSA:3.40.190.10 101 185 3.5E-27 T 19-04-2016 ALIDE2_RS02280 3925d84595c58e70a379a0acd8edf951 298 Gene3D G3DSA:1.10.10.10 12 90 7.1E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02280 3925d84595c58e70a379a0acd8edf951 298 Pfam PF03466 LysR substrate binding domain 99 297 2.7E-35 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS02280 3925d84595c58e70a379a0acd8edf951 298 SUPERFAMILY SSF46785 13 90 8.01E-16 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS02280 3925d84595c58e70a379a0acd8edf951 298 PANTHER PTHR30537 9 298 1.4E-82 T 19-04-2016 ALIDE2_RS02280 3925d84595c58e70a379a0acd8edf951 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 73 3.9E-15 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS24040 4b18bd7ee309280e5e79d53796516319 101 Pfam PF03592 Terminase small subunit 7 59 1.9E-5 T 19-04-2016 IPR005335 Terminase small subunit GO:0006323 ALIDE2_RS18345 705e07c82b826774883cb66ded069a8c 277 Pfam PF13683 Integrase core domain 187 253 6.6E-32 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS18345 705e07c82b826774883cb66ded069a8c 277 PANTHER PTHR32552:SF35 1 256 7.1E-135 T 19-04-2016 ALIDE2_RS18345 705e07c82b826774883cb66ded069a8c 277 Gene3D G3DSA:3.30.420.10 100 254 3.6E-43 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS18345 705e07c82b826774883cb66ded069a8c 277 Pfam PF13276 HTH-like domain 35 87 2.2E-12 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS18345 705e07c82b826774883cb66ded069a8c 277 SUPERFAMILY SSF53098 100 261 4.17E-40 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS18345 705e07c82b826774883cb66ded069a8c 277 PANTHER PTHR32552 1 256 7.1E-135 T 19-04-2016 ALIDE2_RS11370 8861e028006290425fcd35abb1328ac1 179 PANTHER PTHR23004 7 179 2.5E-66 T 19-04-2016 ALIDE2_RS11370 8861e028006290425fcd35abb1328ac1 179 Gene3D G3DSA:1.20.58.320 2 78 3.2E-27 T 19-04-2016 ALIDE2_RS11370 8861e028006290425fcd35abb1328ac1 179 Gene3D G3DSA:1.25.40.10 79 179 1.7E-35 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS11370 8861e028006290425fcd35abb1328ac1 179 Pfam PF06041 Bacterial protein of unknown function (DUF924) 6 176 9.6E-59 T 19-04-2016 IPR010323 Protein of unknown function DUF924 ALIDE2_RS11370 8861e028006290425fcd35abb1328ac1 179 PANTHER PTHR23004:SF7 7 179 2.5E-66 T 19-04-2016 ALIDE2_RS11370 8861e028006290425fcd35abb1328ac1 179 SUPERFAMILY SSF48452 2 175 2.2E-66 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS04240 7aada30f3659f0eeb368252b804e506a 82 Pfam PF02416 mttA/Hcf106 family 5 55 3.5E-14 T 19-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ALIDE2_RS04240 7aada30f3659f0eeb368252b804e506a 82 PANTHER PTHR33162 1 45 1.5E-13 T 19-04-2016 ALIDE2_RS04240 7aada30f3659f0eeb368252b804e506a 82 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 1.0E-22 T 19-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ALIDE2_RS04240 7aada30f3659f0eeb368252b804e506a 82 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 75 22.89 T 19-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ALIDE2_RS14845 37dbeb3abf1d463ef39784d0ca43b767 300 Gene3D G3DSA:3.40.50.720 1 241 1.6E-22 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS14845 37dbeb3abf1d463ef39784d0ca43b767 300 SUPERFAMILY SSF51735 1 292 2.07E-42 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS14845 37dbeb3abf1d463ef39784d0ca43b767 300 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 1.0E-100 T 19-04-2016 IPR010099 Epimerase family protein SDR39U1 ALIDE2_RS14845 37dbeb3abf1d463ef39784d0ca43b767 300 PANTHER PTHR11092 1 300 1.9E-127 T 19-04-2016 IPR010099 Epimerase family protein SDR39U1 ALIDE2_RS14845 37dbeb3abf1d463ef39784d0ca43b767 300 Pfam PF08338 Domain of unknown function (DUF1731) 250 295 4.2E-18 T 19-04-2016 IPR013549 Domain of unknown function DUF1731 ALIDE2_RS14845 37dbeb3abf1d463ef39784d0ca43b767 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 216 6.2E-21 T 19-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 ALIDE2_RS14845 37dbeb3abf1d463ef39784d0ca43b767 300 PANTHER PTHR11092:SF0 1 300 1.9E-127 T 19-04-2016 ALIDE2_RS22795 b14019b125b5548fc35e8b525c40be14 118 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 106 5.6E-31 T 19-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV ALIDE2_RS22795 b14019b125b5548fc35e8b525c40be14 118 PANTHER PTHR37309:SF1 1 118 5.3E-32 T 19-04-2016 ALIDE2_RS22795 b14019b125b5548fc35e8b525c40be14 118 PANTHER PTHR37309 1 118 5.3E-32 T 19-04-2016 ALIDE2_RS23115 992db27097977905a44bad9df9372bd1 122 Pfam PF13670 Peptidase propeptide and YPEB domain 8 86 1.0E-25 T 19-04-2016 IPR025711 PepSY domain ALIDE2_RS23225 49ccaecc4f5dde744e44a5b9d76fa21a 555 SUPERFAMILY SSF51905 52 383 1.47E-32 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS23225 49ccaecc4f5dde744e44a5b9d76fa21a 555 Pfam PF01593 Flavin containing amine oxidoreductase 62 378 6.6E-17 T 19-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 ALIDE2_RS23225 49ccaecc4f5dde744e44a5b9d76fa21a 555 PANTHER PTHR10742:SF224 52 549 2.2E-64 T 19-04-2016 ALIDE2_RS23225 49ccaecc4f5dde744e44a5b9d76fa21a 555 PANTHER PTHR10742 52 549 2.2E-64 T 19-04-2016 ALIDE2_RS23225 49ccaecc4f5dde744e44a5b9d76fa21a 555 Gene3D G3DSA:3.50.50.60 52 154 3.9E-25 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS23225 49ccaecc4f5dde744e44a5b9d76fa21a 555 Gene3D G3DSA:3.50.50.60 279 380 3.9E-25 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS08520 e0deedba21a33fb776902a699f67b3b4 273 SUPERFAMILY SSF53187 7 267 2.93E-82 T 19-04-2016 ALIDE2_RS08520 e0deedba21a33fb776902a699f67b3b4 273 Gene3D G3DSA:3.40.630.40 5 267 9.6E-93 T 19-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 ALIDE2_RS08520 e0deedba21a33fb776902a699f67b3b4 273 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 9 267 3.1E-105 T 19-04-2016 IPR010247 N-formylglutamate deformylase ALIDE2_RS08520 e0deedba21a33fb776902a699f67b3b4 273 Pfam PF05013 N-formylglutamate amidohydrolase 16 236 2.8E-69 T 19-04-2016 IPR007709 N-formylglutamate amidohydrolase ALIDE2_RS21885 c13b7690560df3d718d43551773214f2 484 SUPERFAMILY SSF56954 8 473 7.46E-106 T 19-04-2016 ALIDE2_RS21885 c13b7690560df3d718d43551773214f2 484 PANTHER PTHR30203 14 484 3.7E-123 T 19-04-2016 ALIDE2_RS21885 c13b7690560df3d718d43551773214f2 484 PANTHER PTHR30203:SF15 14 484 3.7E-123 T 19-04-2016 ALIDE2_RS21885 c13b7690560df3d718d43551773214f2 484 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 470 9.8E-111 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 ALIDE2_RS21885 c13b7690560df3d718d43551773214f2 484 Pfam PF02321 Outer membrane efflux protein 289 468 2.6E-24 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS21885 c13b7690560df3d718d43551773214f2 484 Pfam PF02321 Outer membrane efflux protein 69 261 9.4E-21 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS21885 c13b7690560df3d718d43551773214f2 484 Gene3D G3DSA:1.20.1600.10 149 319 1.2E-94 T 19-04-2016 ALIDE2_RS21885 c13b7690560df3d718d43551773214f2 484 Gene3D G3DSA:1.20.1600.10 357 470 1.2E-94 T 19-04-2016 ALIDE2_RS21885 c13b7690560df3d718d43551773214f2 484 Gene3D G3DSA:1.20.1600.10 57 95 1.2E-94 T 19-04-2016 ALIDE2_RS21885 c13b7690560df3d718d43551773214f2 484 Gene3D G3DSA:2.20.200.10 320 355 3.5E-19 T 19-04-2016 ALIDE2_RS21885 c13b7690560df3d718d43551773214f2 484 Gene3D G3DSA:2.20.200.10 105 148 3.5E-19 T 19-04-2016 ALIDE2_RS12620 e4390781eda5cecebae11cc85471cf73 237 PANTHER PTHR23151 15 233 1.9E-65 T 19-04-2016 ALIDE2_RS12620 e4390781eda5cecebae11cc85471cf73 237 SUPERFAMILY SSF52777 15 232 2.89E-64 T 19-04-2016 ALIDE2_RS12620 e4390781eda5cecebae11cc85471cf73 237 Gene3D G3DSA:3.30.559.10 15 233 1.4E-64 T 19-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain ALIDE2_RS12620 e4390781eda5cecebae11cc85471cf73 237 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 14 233 2.5E-65 T 19-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 ALIDE2_RS02020 00c45c8817d9c113b267327dafd48447 127 PANTHER PTHR33910:SF1 1 126 2.8E-17 T 19-04-2016 ALIDE2_RS02020 00c45c8817d9c113b267327dafd48447 127 PRINTS PR01650 Bacterial translocase SecE signature 43 64 2.2E-8 T 19-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 ALIDE2_RS02020 00c45c8817d9c113b267327dafd48447 127 PRINTS PR01650 Bacterial translocase SecE signature 64 84 2.2E-8 T 19-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 ALIDE2_RS02020 00c45c8817d9c113b267327dafd48447 127 PRINTS PR01650 Bacterial translocase SecE signature 88 108 2.2E-8 T 19-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 ALIDE2_RS02020 00c45c8817d9c113b267327dafd48447 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 65 122 10.205 T 19-04-2016 IPR022943 Preprotein translocase subunit SecE ALIDE2_RS02020 00c45c8817d9c113b267327dafd48447 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 68 118 1.8E-15 T 19-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 ALIDE2_RS02020 00c45c8817d9c113b267327dafd48447 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 118 5.6E-18 T 19-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 ALIDE2_RS02020 00c45c8817d9c113b267327dafd48447 127 PANTHER PTHR33910 1 126 2.8E-17 T 19-04-2016 ALIDE2_RS02020 00c45c8817d9c113b267327dafd48447 127 Gene3D G3DSA:1.20.5.1030 64 121 6.3E-23 T 19-04-2016 ALIDE2_RS05615 69e06fe9c9a0aefb7ee2e7743c5be708 92 Pfam PF05751 FixH 22 70 4.4E-11 T 19-04-2016 IPR008620 Nitrogen fixation protein FixH ALIDE2_RS18225 8c5a42d1989f862352ce460da16f268b 192 PANTHER PTHR11046:SF1 13 192 1.9E-93 T 19-04-2016 ALIDE2_RS18225 8c5a42d1989f862352ce460da16f268b 192 Hamap MF_00045 Oligoribonuclease [orn]. 14 192 41.071 T 19-04-2016 IPR022894 Oligoribonuclease GO:0016788 ALIDE2_RS18225 8c5a42d1989f862352ce460da16f268b 192 Gene3D G3DSA:3.30.420.10 15 189 3.0E-68 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS18225 8c5a42d1989f862352ce460da16f268b 192 Pfam PF00929 Exonuclease 20 181 4.1E-31 T 19-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ALIDE2_RS18225 8c5a42d1989f862352ce460da16f268b 192 SUPERFAMILY SSF53098 15 191 3.86E-46 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS18225 8c5a42d1989f862352ce460da16f268b 192 PANTHER PTHR11046 13 192 1.9E-93 T 19-04-2016 ALIDE2_RS18225 8c5a42d1989f862352ce460da16f268b 192 SMART SM00479 18 191 1.9E-24 T 19-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ALIDE2_RS05990 ed3d1b0de831909a43d0f2b4b8091579 324 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 12 317 3.3E-61 T 19-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 ALIDE2_RS05990 ed3d1b0de831909a43d0f2b4b8091579 324 Pfam PF03186 CobD/Cbib protein 15 298 5.1E-81 T 19-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 ALIDE2_RS05990 ed3d1b0de831909a43d0f2b4b8091579 324 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 322 83.314 T 19-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 ALIDE2_RS05990 ed3d1b0de831909a43d0f2b4b8091579 324 PANTHER PTHR34308:SF1 3 324 1.7E-70 T 19-04-2016 ALIDE2_RS05990 ed3d1b0de831909a43d0f2b4b8091579 324 PANTHER PTHR34308 3 324 1.7E-70 T 19-04-2016 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 SMART SM00228 285 367 8.1E-11 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 SMART SM00228 404 482 4.4E-6 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 Pfam PF13180 PDZ domain 285 375 7.8E-18 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 Gene3D G3DSA:2.40.10.10 47 176 1.7E-38 T 19-04-2016 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 47 487 4.0E-148 T 19-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 Pfam PF13365 Trypsin-like peptidase domain 115 246 1.4E-35 T 19-04-2016 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 PANTHER PTHR22939 38 69 5.4E-128 T 19-04-2016 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 PANTHER PTHR22939 95 380 5.4E-128 T 19-04-2016 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 SUPERFAMILY SSF50156 405 491 3.68E-11 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 PANTHER PTHR22939:SF98 38 69 5.4E-128 T 19-04-2016 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 PANTHER PTHR22939:SF98 95 380 5.4E-128 T 19-04-2016 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 SUPERFAMILY SSF50494 45 276 1.24E-66 T 19-04-2016 IPR009003 Peptidase S1, PA clan ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 PRINTS PR00834 HtrA/DegQ protease family signature 124 136 3.8E-52 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 PRINTS PR00834 HtrA/DegQ protease family signature 325 337 3.8E-52 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 PRINTS PR00834 HtrA/DegQ protease family signature 185 209 3.8E-52 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 PRINTS PR00834 HtrA/DegQ protease family signature 145 165 3.8E-52 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 PRINTS PR00834 HtrA/DegQ protease family signature 239 256 3.8E-52 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 PRINTS PR00834 HtrA/DegQ protease family signature 217 234 3.8E-52 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 Gene3D G3DSA:2.30.42.10 405 491 1.3E-13 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 Gene3D G3DSA:2.30.42.10 287 382 3.1E-29 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 SUPERFAMILY SSF50156 243 367 2.37E-23 T 19-04-2016 IPR001478 PDZ domain GO:0005515 ALIDE2_RS06335 c73ad172d2ee007872ee32975063baf0 493 Gene3D G3DSA:2.40.10.10 177 286 1.2E-43 T 19-04-2016 ALIDE2_RS07220 0a802443873af681c79d9770ec9dc688 223 Pfam PF11828 Protein of unknown function (DUF3348) 186 215 1.1E-10 T 19-04-2016 IPR021783 Protein of unknown function DUF3348 ALIDE2_RS07220 0a802443873af681c79d9770ec9dc688 223 Pfam PF11828 Protein of unknown function (DUF3348) 1 183 9.7E-49 T 19-04-2016 IPR021783 Protein of unknown function DUF3348 ALIDE2_RS15850 300eaa85fccfb37a26d3f52e0122e5f6 313 PANTHER PTHR22602 6 305 2.3E-44 T 19-04-2016 ALIDE2_RS15850 300eaa85fccfb37a26d3f52e0122e5f6 313 SUPERFAMILY SSF103025 13 231 2.83E-51 T 19-04-2016 ALIDE2_RS15850 300eaa85fccfb37a26d3f52e0122e5f6 313 Pfam PF01571 Aminomethyltransferase folate-binding domain 15 130 1.3E-12 T 19-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal ALIDE2_RS15850 300eaa85fccfb37a26d3f52e0122e5f6 313 PANTHER PTHR22602:SF0 6 305 2.3E-44 T 19-04-2016 ALIDE2_RS15850 300eaa85fccfb37a26d3f52e0122e5f6 313 Gene3D G3DSA:3.30.70.1400 23 108 1.5E-27 T 19-04-2016 ALIDE2_RS15850 300eaa85fccfb37a26d3f52e0122e5f6 313 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 215 271 2.0E-4 T 19-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ALIDE2_RS15850 300eaa85fccfb37a26d3f52e0122e5f6 313 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 177 240 7.8E-23 T 19-04-2016 IPR017703 YgfZ/GcvT conserved site ALIDE2_RS23155 8a520994251d051b5968df40aeba9807 364 SUPERFAMILY SSF51412 4 360 1.02E-41 T 19-04-2016 ALIDE2_RS23155 8a520994251d051b5968df40aeba9807 364 Pfam PF03060 Nitronate monooxygenase 13 349 3.0E-46 T 19-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ALIDE2_RS23155 8a520994251d051b5968df40aeba9807 364 Gene3D G3DSA:3.20.20.70 4 73 1.2E-47 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS23155 8a520994251d051b5968df40aeba9807 364 Gene3D G3DSA:3.20.20.70 108 353 1.2E-47 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS23155 8a520994251d051b5968df40aeba9807 364 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 214 234 - T 19-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 ALIDE2_RS23155 8a520994251d051b5968df40aeba9807 364 PANTHER PTHR10982:SF10 1 114 1.1E-58 T 19-04-2016 ALIDE2_RS23155 8a520994251d051b5968df40aeba9807 364 PANTHER PTHR10982:SF10 143 358 1.1E-58 T 19-04-2016 ALIDE2_RS23155 8a520994251d051b5968df40aeba9807 364 PANTHER PTHR10982 1 114 1.1E-58 T 19-04-2016 ALIDE2_RS23155 8a520994251d051b5968df40aeba9807 364 PANTHER PTHR10982 143 358 1.1E-58 T 19-04-2016 ALIDE2_RS12195 e96bd0de56fad0a3fc5f5b5510045b8c 311 PANTHER PTHR14226 8 308 1.5E-87 T 19-04-2016 ALIDE2_RS12195 e96bd0de56fad0a3fc5f5b5510045b8c 311 SUPERFAMILY SSF52151 8 306 1.62E-57 T 19-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 ALIDE2_RS12195 e96bd0de56fad0a3fc5f5b5510045b8c 311 PANTHER PTHR14226:SF24 8 308 1.5E-87 T 19-04-2016 ALIDE2_RS12195 e96bd0de56fad0a3fc5f5b5510045b8c 311 Gene3D G3DSA:3.40.1090.10 12 174 6.8E-12 T 19-04-2016 ALIDE2_RS12195 e96bd0de56fad0a3fc5f5b5510045b8c 311 Pfam PF01734 Patatin-like phospholipase 12 171 6.0E-20 T 19-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 ALIDE2_RS13090 5de3399cf108f26a476206af6c31d7e0 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 279 4.4E-27 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS13090 5de3399cf108f26a476206af6c31d7e0 288 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 19 278 7.6E-100 T 19-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 ALIDE2_RS13090 5de3399cf108f26a476206af6c31d7e0 288 PANTHER PTHR30406:SF6 11 287 8.1E-164 T 19-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 ALIDE2_RS13090 5de3399cf108f26a476206af6c31d7e0 288 PANTHER PTHR30406 11 287 8.1E-164 T 19-04-2016 ALIDE2_RS13090 5de3399cf108f26a476206af6c31d7e0 288 SUPERFAMILY SSF161098 31 273 1.96E-55 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS13090 5de3399cf108f26a476206af6c31d7e0 288 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 19 282 1.5E-128 T 19-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 ALIDE2_RS13090 5de3399cf108f26a476206af6c31d7e0 288 Gene3D G3DSA:1.10.3720.10 30 282 2.1E-55 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS10705 4903b4d421f03f3e8078623f6f3890b9 121 PANTHER PTHR39335 4 121 2.1E-36 T 19-04-2016 ALIDE2_RS10705 4903b4d421f03f3e8078623f6f3890b9 121 Pfam PF03640 Secreted repeat of unknown function 24 65 5.1E-14 T 19-04-2016 IPR005297 Lipoprotein repeat ALIDE2_RS10705 4903b4d421f03f3e8078623f6f3890b9 121 Pfam PF03640 Secreted repeat of unknown function 78 119 2.5E-21 T 19-04-2016 IPR005297 Lipoprotein repeat ALIDE2_RS10705 4903b4d421f03f3e8078623f6f3890b9 121 PIRSF PIRSF029720 2 121 1.3E-43 T 19-04-2016 IPR014558 Uncharacterised conserved lipoprotein ALIDE2_RS15865 79b5676c7cc1ebee41d689206afc6b1f 493 Pfam PF00512 His Kinase A (phospho-acceptor) domain 267 330 3.1E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS15865 79b5676c7cc1ebee41d689206afc6b1f 493 SUPERFAMILY SSF47384 262 330 1.22E-8 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS15865 79b5676c7cc1ebee41d689206afc6b1f 493 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 489 9.3E-20 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS15865 79b5676c7cc1ebee41d689206afc6b1f 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 488 6.67E-14 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS15865 79b5676c7cc1ebee41d689206afc6b1f 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 449 6.67E-14 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS15865 79b5676c7cc1ebee41d689206afc6b1f 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 6.67E-14 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS15865 79b5676c7cc1ebee41d689206afc6b1f 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 435 6.67E-14 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS15865 79b5676c7cc1ebee41d689206afc6b1f 493 Gene3D G3DSA:3.30.565.10 340 490 5.8E-35 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS15865 79b5676c7cc1ebee41d689206afc6b1f 493 PANTHER PTHR24423 26 33 4.4E-49 T 19-04-2016 ALIDE2_RS15865 79b5676c7cc1ebee41d689206afc6b1f 493 PANTHER PTHR24423 264 489 4.4E-49 T 19-04-2016 ALIDE2_RS15865 79b5676c7cc1ebee41d689206afc6b1f 493 SUPERFAMILY SSF55874 340 489 2.1E-33 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS15865 79b5676c7cc1ebee41d689206afc6b1f 493 SMART SM00388 266 336 6.5E-8 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS15865 79b5676c7cc1ebee41d689206afc6b1f 493 SMART SM00387 380 491 1.4E-26 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS15865 79b5676c7cc1ebee41d689206afc6b1f 493 Gene3D G3DSA:1.10.287.130 264 328 2.0E-5 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS11730 f12eb0c235c99b09dd7326b67c0d13cb 561 Gene3D G3DSA:3.30.70.270 393 555 2.0E-55 T 19-04-2016 ALIDE2_RS11730 f12eb0c235c99b09dd7326b67c0d13cb 561 SUPERFAMILY SSF55073 396 552 1.49E-49 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS11730 f12eb0c235c99b09dd7326b67c0d13cb 561 PANTHER PTHR10799:SF750 286 551 1.3E-32 T 19-04-2016 ALIDE2_RS11730 f12eb0c235c99b09dd7326b67c0d13cb 561 Pfam PF00990 Diguanylate cyclase, GGDEF domain 392 549 8.6E-50 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS11730 f12eb0c235c99b09dd7326b67c0d13cb 561 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 387 553 2.3E-56 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS11730 f12eb0c235c99b09dd7326b67c0d13cb 561 SMART SM00267 380 554 3.6E-70 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS11730 f12eb0c235c99b09dd7326b67c0d13cb 561 PANTHER PTHR10799 286 551 1.3E-32 T 19-04-2016 ALIDE2_RS20415 069db7701b3778604ee9d2ff3071e909 104 SUPERFAMILY SSF48295 4 70 2.04E-15 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 ALIDE2_RS20415 069db7701b3778604ee9d2ff3071e909 104 Pfam PF01527 Transposase 10 73 1.4E-7 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS20415 069db7701b3778604ee9d2ff3071e909 104 Gene3D G3DSA:1.10.10.10 1 71 5.2E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 SUPERFAMILY SSF52540 395 447 8.44E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 SUPERFAMILY SSF52540 159 219 8.44E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 SUPERFAMILY SSF52540 476 592 8.44E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 Pfam PF00176 SNF2 family N-terminal domain 10 264 1.2E-33 T 19-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 SMART SM00490 468 548 3.3E-22 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 Gene3D G3DSA:3.40.50.300 399 571 5.0E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 PANTHER PTHR10799:SF688 681 697 1.3E-63 T 19-04-2016 ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 PANTHER PTHR10799:SF688 26 310 1.3E-63 T 19-04-2016 ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 Gene3D G3DSA:3.40.50.300 39 217 1.3E-21 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 Pfam PF00271 Helicase conserved C-terminal domain 440 548 4.8E-18 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 PANTHER PTHR10799 346 369 1.3E-63 T 19-04-2016 ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 PANTHER PTHR10799 681 697 1.3E-63 T 19-04-2016 ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 PANTHER PTHR10799 395 446 1.3E-63 T 19-04-2016 ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 PANTHER PTHR10799 26 310 1.3E-63 T 19-04-2016 ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 PANTHER PTHR10799 477 616 1.3E-63 T 19-04-2016 ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 SUPERFAMILY SSF52540 32 235 5.21E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 SMART SM00487 38 233 1.6E-24 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 PANTHER PTHR10799:SF688 346 369 1.3E-63 T 19-04-2016 ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 PANTHER PTHR10799:SF688 395 446 1.3E-63 T 19-04-2016 ALIDE2_RS08950 cd7f53dd8c3e4f0ac85f8f7d8ee1f837 959 PANTHER PTHR10799:SF688 477 616 1.3E-63 T 19-04-2016 ALIDE2_RS17620 81e3aa84a1437f71d1408172be30fee4 331 PANTHER PTHR24220:SF336 37 327 3.0E-138 T 19-04-2016 ALIDE2_RS17620 81e3aa84a1437f71d1408172be30fee4 331 PANTHER PTHR24220:SF336 9 19 3.0E-138 T 19-04-2016 ALIDE2_RS17620 81e3aa84a1437f71d1408172be30fee4 331 Gene3D G3DSA:3.40.50.300 5 267 8.5E-77 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17620 81e3aa84a1437f71d1408172be30fee4 331 PANTHER PTHR24220 37 327 3.0E-138 T 19-04-2016 ALIDE2_RS17620 81e3aa84a1437f71d1408172be30fee4 331 PANTHER PTHR24220 9 19 3.0E-138 T 19-04-2016 ALIDE2_RS17620 81e3aa84a1437f71d1408172be30fee4 331 SMART SM00382 49 241 2.2E-17 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS17620 81e3aa84a1437f71d1408172be30fee4 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS17620 81e3aa84a1437f71d1408172be30fee4 331 Pfam PF00005 ABC transporter 41 191 1.1E-28 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS17620 81e3aa84a1437f71d1408172be30fee4 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 327 1.4E-27 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS17620 81e3aa84a1437f71d1408172be30fee4 331 SUPERFAMILY SSF52540 9 263 1.41E-68 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17620 81e3aa84a1437f71d1408172be30fee4 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 307 1.2E-17 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS08920 6e01f60b6cca2a36d76eea813af75fde 875 Gene3D G3DSA:3.40.50.300 275 341 4.9E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08920 6e01f60b6cca2a36d76eea813af75fde 875 Gene3D G3DSA:3.40.50.300 417 418 4.9E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08920 6e01f60b6cca2a36d76eea813af75fde 875 Gene3D G3DSA:3.40.50.300 620 707 4.9E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08920 6e01f60b6cca2a36d76eea813af75fde 875 Gene3D G3DSA:3.40.50.300 92 160 4.9E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08920 6e01f60b6cca2a36d76eea813af75fde 875 Pfam PF13166 AAA domain 627 713 3.5E-11 T 19-04-2016 IPR026866 P-loop containing protein CR006/PrrC ALIDE2_RS08920 6e01f60b6cca2a36d76eea813af75fde 875 SUPERFAMILY SSF52540 99 237 7.36E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08920 6e01f60b6cca2a36d76eea813af75fde 875 SUPERFAMILY SSF52540 558 710 7.36E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04620 778c03ca2a4ddb8b33840d890f0d743c 409 PANTHER PTHR21248:SF5 16 408 1.5E-76 T 19-04-2016 ALIDE2_RS04620 778c03ca2a4ddb8b33840d890f0d743c 409 SUPERFAMILY SSF56024 213 386 1.03E-36 T 19-04-2016 ALIDE2_RS04620 778c03ca2a4ddb8b33840d890f0d743c 409 Gene3D G3DSA:3.30.870.10 233 391 1.4E-35 T 19-04-2016 ALIDE2_RS04620 778c03ca2a4ddb8b33840d890f0d743c 409 Gene3D G3DSA:3.30.870.10 12 181 4.9E-31 T 19-04-2016 ALIDE2_RS04620 778c03ca2a4ddb8b33840d890f0d743c 409 Pfam PF13091 PLD-like domain 30 139 5.1E-11 T 19-04-2016 IPR025202 Phospholipase D-like domain ALIDE2_RS04620 778c03ca2a4ddb8b33840d890f0d743c 409 Pfam PF13091 PLD-like domain 237 363 3.6E-24 T 19-04-2016 IPR025202 Phospholipase D-like domain ALIDE2_RS04620 778c03ca2a4ddb8b33840d890f0d743c 409 Hamap MF_01917 Cardiolipin synthase B [clsB]. 7 409 42.448 T 19-04-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 ALIDE2_RS04620 778c03ca2a4ddb8b33840d890f0d743c 409 PANTHER PTHR21248 16 408 1.5E-76 T 19-04-2016 ALIDE2_RS04620 778c03ca2a4ddb8b33840d890f0d743c 409 SUPERFAMILY SSF56024 11 179 5.23E-35 T 19-04-2016 ALIDE2_RS03655 4f50b556630b07b67ec34f1cd7f37cf3 202 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 113 173 2.2E-12 T 19-04-2016 ALIDE2_RS03655 4f50b556630b07b67ec34f1cd7f37cf3 202 Pfam PF01471 Putative peptidoglycan binding domain 4 29 2.5E-4 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS03655 4f50b556630b07b67ec34f1cd7f37cf3 202 Gene3D G3DSA:1.10.101.10 4 32 4.1E-5 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS03655 4f50b556630b07b67ec34f1cd7f37cf3 202 SUPERFAMILY SSF55166 59 179 6.54E-30 T 19-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain ALIDE2_RS09315 305f1d56dcab353d2fdab67cb5258d0b 148 Gene3D G3DSA:3.10.129.10 5 143 1.5E-39 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS09315 305f1d56dcab353d2fdab67cb5258d0b 148 SUPERFAMILY SSF54637 1 143 1.79E-37 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS09315 305f1d56dcab353d2fdab67cb5258d0b 148 PANTHER PTHR13078 1 142 7.2E-31 T 19-04-2016 ALIDE2_RS09315 305f1d56dcab353d2fdab67cb5258d0b 148 Pfam PF01575 MaoC like domain 12 118 2.0E-19 T 19-04-2016 IPR002539 MaoC-like domain ALIDE2_RS12225 657a138d74d95987af6172cbfcced0ce 282 SUPERFAMILY SSF64438 11 281 2.38E-75 T 19-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic ALIDE2_RS12225 657a138d74d95987af6172cbfcced0ce 282 Gene3D G3DSA:3.60.140.10 11 281 1.7E-98 T 19-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase ALIDE2_RS12225 657a138d74d95987af6172cbfcced0ce 282 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 29 280 1.3E-71 T 19-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase ALIDE2_RS12225 657a138d74d95987af6172cbfcced0ce 282 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 34 281 5.7E-52 T 19-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase ALIDE2_RS12225 657a138d74d95987af6172cbfcced0ce 282 PANTHER PTHR30616:SF3 13 282 9.9E-103 T 19-04-2016 ALIDE2_RS12225 657a138d74d95987af6172cbfcced0ce 282 PANTHER PTHR30616 13 282 9.9E-103 T 19-04-2016 ALIDE2_RS12340 e59219985954ec17484a013ed333b867 211 Gene3D G3DSA:1.10.10.10 5 74 2.3E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12340 e59219985954ec17484a013ed333b867 211 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 4.8E-6 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS12340 e59219985954ec17484a013ed333b867 211 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 4.8E-6 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS12340 e59219985954ec17484a013ed333b867 211 SMART SM00895 83 205 3.6E-20 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS12340 e59219985954ec17484a013ed333b867 211 Gene3D G3DSA:1.20.120.530 76 208 3.0E-32 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS12340 e59219985954ec17484a013ed333b867 211 PANTHER PTHR11751:SF362 11 99 2.7E-25 T 19-04-2016 ALIDE2_RS12340 e59219985954ec17484a013ed333b867 211 SMART SM00345 15 73 3.7E-15 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS12340 e59219985954ec17484a013ed333b867 211 Pfam PF07729 FCD domain 83 204 8.0E-26 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS12340 e59219985954ec17484a013ed333b867 211 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 2.5E-18 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS12340 e59219985954ec17484a013ed333b867 211 PANTHER PTHR11751 11 99 2.7E-25 T 19-04-2016 ALIDE2_RS12340 e59219985954ec17484a013ed333b867 211 SUPERFAMILY SSF46785 7 77 2.85E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12340 e59219985954ec17484a013ed333b867 211 SUPERFAMILY SSF48008 79 208 9.42E-27 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS14850 888174541fc3f393bdfb8885b3b56a91 232 Gene3D G3DSA:3.40.50.720 8 232 4.1E-37 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS14850 888174541fc3f393bdfb8885b3b56a91 232 PANTHER PTHR24322 148 181 1.1E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS14850 888174541fc3f393bdfb8885b3b56a91 232 PANTHER PTHR24322 12 128 1.1E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS14850 888174541fc3f393bdfb8885b3b56a91 232 SUPERFAMILY SSF51735 10 232 4.11E-40 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS14850 888174541fc3f393bdfb8885b3b56a91 232 PANTHER PTHR24322:SF540 148 181 1.1E-26 T 19-04-2016 ALIDE2_RS14850 888174541fc3f393bdfb8885b3b56a91 232 PANTHER PTHR24322:SF540 12 128 1.1E-26 T 19-04-2016 ALIDE2_RS14850 888174541fc3f393bdfb8885b3b56a91 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.3E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS14850 888174541fc3f393bdfb8885b3b56a91 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.3E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS14850 888174541fc3f393bdfb8885b3b56a91 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.3E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS14850 888174541fc3f393bdfb8885b3b56a91 232 Pfam PF00106 short chain dehydrogenase 75 190 2.1E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10710 1eca430d1865c87254ced1e22d9137ce 157 ProSitePatterns PS01317 SsrA-binding protein. 29 41 - T 19-04-2016 IPR020081 SsrA-binding protein, conserved site ALIDE2_RS10710 1eca430d1865c87254ced1e22d9137ce 157 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 135 6.0E-58 T 19-04-2016 IPR000037 SsrA-binding protein GO:0003723 ALIDE2_RS10710 1eca430d1865c87254ced1e22d9137ce 157 PANTHER PTHR30308:SF2 1 157 7.8E-71 T 19-04-2016 ALIDE2_RS10710 1eca430d1865c87254ced1e22d9137ce 157 PANTHER PTHR30308 1 157 7.8E-71 T 19-04-2016 ALIDE2_RS10710 1eca430d1865c87254ced1e22d9137ce 157 Hamap MF_00023 SsrA-binding protein [smpB]. 1 157 72.308 T 19-04-2016 IPR000037 SsrA-binding protein GO:0003723 ALIDE2_RS10710 1eca430d1865c87254ced1e22d9137ce 157 SUPERFAMILY SSF74982 6 135 1.57E-49 T 19-04-2016 IPR023620 Small protein B ALIDE2_RS10710 1eca430d1865c87254ced1e22d9137ce 157 Pfam PF01668 SmpB protein 11 73 1.5E-26 T 19-04-2016 IPR000037 SsrA-binding protein GO:0003723 ALIDE2_RS10710 1eca430d1865c87254ced1e22d9137ce 157 Gene3D G3DSA:2.40.280.10 11 130 2.0E-48 T 19-04-2016 IPR023620 Small protein B ALIDE2_RS10710 1eca430d1865c87254ced1e22d9137ce 157 TIGRFAM TIGR00086 smpB: SsrA-binding protein 11 153 4.0E-53 T 19-04-2016 IPR000037 SsrA-binding protein GO:0003723 ALIDE2_RS13585 4a99c06a186c29b8a2d73a489f813c8f 437 Gene3D G3DSA:1.20.1250.20 244 414 2.6E-11 T 19-04-2016 ALIDE2_RS13585 4a99c06a186c29b8a2d73a489f813c8f 437 Gene3D G3DSA:1.20.1250.20 27 220 1.1E-20 T 19-04-2016 ALIDE2_RS13585 4a99c06a186c29b8a2d73a489f813c8f 437 PANTHER PTHR23504 5 414 5.5E-13 T 19-04-2016 ALIDE2_RS13585 4a99c06a186c29b8a2d73a489f813c8f 437 Pfam PF07690 Major Facilitator Superfamily 31 257 4.7E-19 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS13585 4a99c06a186c29b8a2d73a489f813c8f 437 Pfam PF07690 Major Facilitator Superfamily 262 414 1.9E-8 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS13585 4a99c06a186c29b8a2d73a489f813c8f 437 PRINTS PR01035 Tetracycline resistance protein signature 333 353 1.4E-6 T 19-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ALIDE2_RS13585 4a99c06a186c29b8a2d73a489f813c8f 437 PRINTS PR01035 Tetracycline resistance protein signature 36 52 1.4E-6 T 19-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ALIDE2_RS13585 4a99c06a186c29b8a2d73a489f813c8f 437 PRINTS PR01035 Tetracycline resistance protein signature 159 181 1.4E-6 T 19-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ALIDE2_RS13585 4a99c06a186c29b8a2d73a489f813c8f 437 SUPERFAMILY SSF103473 27 417 1.18E-36 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS13585 4a99c06a186c29b8a2d73a489f813c8f 437 PANTHER PTHR23504:SF18 5 414 5.5E-13 T 19-04-2016 ALIDE2_RS13570 a4927d6ff90665a9a163e890b89cc802 165 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 23 141 2.6E-12 T 19-04-2016 IPR007621 TPM domain ALIDE2_RS13570 a4927d6ff90665a9a163e890b89cc802 165 PANTHER PTHR30373 18 164 3.6E-58 T 19-04-2016 ALIDE2_RS13570 a4927d6ff90665a9a163e890b89cc802 165 PANTHER PTHR30373:SF3 18 164 3.6E-58 T 19-04-2016 ALIDE2_RS00840 e9f8ac832e62683255a2158049e30caa 333 SUPERFAMILY SSF53850 94 288 3.74E-10 T 19-04-2016 ALIDE2_RS00840 e9f8ac832e62683255a2158049e30caa 333 PANTHER PTHR30349 4 295 3.0E-44 T 19-04-2016 ALIDE2_RS00840 e9f8ac832e62683255a2158049e30caa 333 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 324 4.7E-44 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00840 e9f8ac832e62683255a2158049e30caa 333 PANTHER PTHR30349:SF1 4 295 3.0E-44 T 19-04-2016 ALIDE2_RS08355 c92465e17818fcddb722b787213655f5 350 Gene3D G3DSA:3.30.1540.10 225 292 7.0E-6 T 19-04-2016 ALIDE2_RS08355 c92465e17818fcddb722b787213655f5 350 Pfam PF02515 CoA-transferase family III 5 346 4.1E-75 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS08355 c92465e17818fcddb722b787213655f5 350 PANTHER PTHR24023 61 340 1.5E-74 T 19-04-2016 ALIDE2_RS08355 c92465e17818fcddb722b787213655f5 350 PANTHER PTHR24023:SF545 61 340 1.5E-74 T 19-04-2016 ALIDE2_RS08355 c92465e17818fcddb722b787213655f5 350 SUPERFAMILY SSF89796 3 340 3.14E-90 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS08355 c92465e17818fcddb722b787213655f5 350 Gene3D G3DSA:3.40.50.10540 3 209 1.6E-77 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS08355 c92465e17818fcddb722b787213655f5 350 Gene3D G3DSA:3.40.50.10540 293 338 1.6E-77 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07205 659d7e32d1f9e186b5c8f707f3f68b89 236 Gene3D G3DSA:1.10.10.10 133 234 2.5E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07205 659d7e32d1f9e186b5c8f707f3f68b89 236 SUPERFAMILY SSF52172 10 189 2.99E-37 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS07205 659d7e32d1f9e186b5c8f707f3f68b89 236 PANTHER PTHR26402:SF516 10 232 4.2E-127 T 19-04-2016 ALIDE2_RS07205 659d7e32d1f9e186b5c8f707f3f68b89 236 SMART SM00448 10 120 1.0E-34 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS07205 659d7e32d1f9e186b5c8f707f3f68b89 236 SMART SM00862 155 231 1.3E-22 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS07205 659d7e32d1f9e186b5c8f707f3f68b89 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 5.1E-21 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ALIDE2_RS07205 659d7e32d1f9e186b5c8f707f3f68b89 236 Pfam PF00072 Response regulator receiver domain 12 121 5.6E-26 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS07205 659d7e32d1f9e186b5c8f707f3f68b89 236 Gene3D G3DSA:3.40.50.2300 9 129 4.9E-35 T 19-04-2016 ALIDE2_RS07205 659d7e32d1f9e186b5c8f707f3f68b89 236 PANTHER PTHR26402 10 232 4.2E-127 T 19-04-2016 ALIDE2_RS12430 e7a92e0091275a55bfa3240c835a707f 378 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 305 5.2E-17 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12430 e7a92e0091275a55bfa3240c835a707f 378 Gene3D G3DSA:3.50.50.60 105 317 1.1E-13 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12430 e7a92e0091275a55bfa3240c835a707f 378 Gene3D G3DSA:3.50.50.60 5 104 9.9E-17 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12430 e7a92e0091275a55bfa3240c835a707f 378 PANTHER PTHR10632:SF7 5 378 3.4E-55 T 19-04-2016 ALIDE2_RS12430 e7a92e0091275a55bfa3240c835a707f 378 PANTHER PTHR10632 5 378 3.4E-55 T 19-04-2016 ALIDE2_RS12430 e7a92e0091275a55bfa3240c835a707f 378 SUPERFAMILY SSF51905 6 103 1.2E-19 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12430 e7a92e0091275a55bfa3240c835a707f 378 SUPERFAMILY SSF51905 200 323 1.2E-19 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS10400 d7be507ed6f9a61a5d8afe5eed2472ce 263 Pfam PF00106 short chain dehydrogenase 14 207 6.6E-57 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10400 d7be507ed6f9a61a5d8afe5eed2472ce 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 4.9E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10400 d7be507ed6f9a61a5d8afe5eed2472ce 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 4.9E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10400 d7be507ed6f9a61a5d8afe5eed2472ce 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.9E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10400 d7be507ed6f9a61a5d8afe5eed2472ce 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 4.9E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10400 d7be507ed6f9a61a5d8afe5eed2472ce 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 4.9E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10400 d7be507ed6f9a61a5d8afe5eed2472ce 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 4.9E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10400 d7be507ed6f9a61a5d8afe5eed2472ce 263 SUPERFAMILY SSF51735 8 259 8.55E-77 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS10400 d7be507ed6f9a61a5d8afe5eed2472ce 263 PANTHER PTHR24322 166 198 1.4E-58 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10400 d7be507ed6f9a61a5d8afe5eed2472ce 263 PANTHER PTHR24322 18 147 1.4E-58 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10400 d7be507ed6f9a61a5d8afe5eed2472ce 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 7.5E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10400 d7be507ed6f9a61a5d8afe5eed2472ce 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 7.5E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10400 d7be507ed6f9a61a5d8afe5eed2472ce 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 7.5E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS10400 d7be507ed6f9a61a5d8afe5eed2472ce 263 Gene3D G3DSA:3.40.50.720 4 258 5.9E-82 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS19700 cf9e519bef983c656a5e39139e39011f 410 SUPERFAMILY SSF102114 26 408 1.06E-106 T 19-04-2016 ALIDE2_RS19700 cf9e519bef983c656a5e39139e39011f 410 PANTHER PTHR13932 33 410 5.0E-163 T 19-04-2016 ALIDE2_RS19700 cf9e519bef983c656a5e39139e39011f 410 PANTHER PTHR13932:SF7 33 410 5.0E-163 T 19-04-2016 ALIDE2_RS19700 cf9e519bef983c656a5e39139e39011f 410 Gene3D G3DSA:3.80.30.20 35 266 9.7E-35 T 19-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe ALIDE2_RS19700 cf9e519bef983c656a5e39139e39011f 410 Pfam PF06969 HemN C-terminal domain 336 397 2.8E-14 T 19-04-2016 IPR010723 HemN, C-terminal ALIDE2_RS19700 cf9e519bef983c656a5e39139e39011f 410 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 35 376 1.8E-106 T 19-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- ALIDE2_RS19700 cf9e519bef983c656a5e39139e39011f 410 Pfam PF04055 Radical SAM superfamily 39 206 2.4E-21 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ALIDE2_RS19700 cf9e519bef983c656a5e39139e39011f 410 SMART SM00729 34 252 2.1E-56 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ALIDE2_RS10900 16a752ca03f737c3bf3b8313c2d3a595 168 Gene3D G3DSA:2.60.40.420 45 166 1.5E-39 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS10900 16a752ca03f737c3bf3b8313c2d3a595 168 SUPERFAMILY SSF49503 57 166 1.46E-30 T 19-04-2016 IPR008972 Cupredoxin ALIDE2_RS10900 16a752ca03f737c3bf3b8313c2d3a595 168 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 62 166 7.6E-11 T 19-04-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 ALIDE2_RS19015 cb94b0dd541d62a03493e5e87bd7e2fa 396 Pfam PF00268 Ribonucleotide reductase, small chain 76 363 1.8E-81 T 19-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 ALIDE2_RS19015 cb94b0dd541d62a03493e5e87bd7e2fa 396 PANTHER PTHR23409 60 391 1.3E-147 T 19-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 ALIDE2_RS19015 cb94b0dd541d62a03493e5e87bd7e2fa 396 Gene3D G3DSA:1.10.620.20 59 371 2.9E-110 T 19-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 ALIDE2_RS19015 cb94b0dd541d62a03493e5e87bd7e2fa 396 PIRSF PIRSF000355 47 396 1.4E-132 T 19-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 ALIDE2_RS19015 cb94b0dd541d62a03493e5e87bd7e2fa 396 PANTHER PTHR23409:SF18 60 391 1.3E-147 T 19-04-2016 ALIDE2_RS19015 cb94b0dd541d62a03493e5e87bd7e2fa 396 SUPERFAMILY SSF47240 60 367 1.54E-96 T 19-04-2016 IPR009078 Ferritin-like superfamily ALIDE2_RS20115 1f9e7718fed2bd8159417b0b2222e3bc 477 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 459 1.7E-163 T 19-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS20115 1f9e7718fed2bd8159417b0b2222e3bc 477 Gene3D G3DSA:3.90.190.20 315 465 1.9E-54 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS20115 1f9e7718fed2bd8159417b0b2222e3bc 477 Gene3D G3DSA:3.40.50.720 6 92 3.0E-35 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS20115 1f9e7718fed2bd8159417b0b2222e3bc 477 SUPERFAMILY SSF53244 312 464 2.93E-46 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS20115 1f9e7718fed2bd8159417b0b2222e3bc 477 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 404 2.1E-17 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 ALIDE2_RS20115 1f9e7718fed2bd8159417b0b2222e3bc 477 PANTHER PTHR23135 1 454 1.7E-195 T 19-04-2016 ALIDE2_RS20115 1f9e7718fed2bd8159417b0b2222e3bc 477 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 466 42.725 T 19-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 ALIDE2_RS20115 1f9e7718fed2bd8159417b0b2222e3bc 477 Pfam PF08245 Mur ligase middle domain 110 293 2.7E-26 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20115 1f9e7718fed2bd8159417b0b2222e3bc 477 Gene3D G3DSA:3.40.1190.10 94 314 3.8E-79 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20115 1f9e7718fed2bd8159417b0b2222e3bc 477 SUPERFAMILY SSF53623 91 310 1.22E-69 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS20115 1f9e7718fed2bd8159417b0b2222e3bc 477 PANTHER PTHR23135:SF5 1 454 1.7E-195 T 19-04-2016 ALIDE2_RS20115 1f9e7718fed2bd8159417b0b2222e3bc 477 SUPERFAMILY SSF51984 6 92 2.88E-29 T 19-04-2016 ALIDE2_RS20115 1f9e7718fed2bd8159417b0b2222e3bc 477 Pfam PF01225 Mur ligase family, catalytic domain 7 104 3.5E-27 T 19-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 ALIDE2_RS07920 05b7fcc15a4ea5a260df11debba5e401 380 PANTHER PTHR30294:SF12 7 377 6.0E-83 T 19-04-2016 ALIDE2_RS07920 05b7fcc15a4ea5a260df11debba5e401 380 Pfam PF12698 ABC-2 family transporter protein 36 369 7.4E-48 T 19-04-2016 ALIDE2_RS07920 05b7fcc15a4ea5a260df11debba5e401 380 PANTHER PTHR30294 7 377 6.0E-83 T 19-04-2016 ALIDE2_RS09565 4ebdb07b68ab35310193b9a644cd8691 142 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 15 130 1.1E-41 T 19-04-2016 IPR021877 Protein of unknown function DUF3487 ALIDE2_RS09565 4ebdb07b68ab35310193b9a644cd8691 142 Pfam PF11990 Protein of unknown function (DUF3487) 14 130 2.7E-42 T 19-04-2016 IPR021877 Protein of unknown function DUF3487 ALIDE2_RS13360 923c92ebbd43ec9726800a4cf09fb891 158 SUPERFAMILY SSF46557 3 78 1.24E-27 T 19-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ALIDE2_RS13360 923c92ebbd43ec9726800a4cf09fb891 158 SUPERFAMILY SSF54534 83 157 4.84E-24 T 19-04-2016 ALIDE2_RS13360 923c92ebbd43ec9726800a4cf09fb891 158 Gene3D G3DSA:3.10.50.30 82 157 5.1E-31 T 19-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ALIDE2_RS13360 923c92ebbd43ec9726800a4cf09fb891 158 PANTHER PTHR30437 1 157 2.8E-65 T 19-04-2016 ALIDE2_RS13360 923c92ebbd43ec9726800a4cf09fb891 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 3.0E-56 T 19-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 ALIDE2_RS13360 923c92ebbd43ec9726800a4cf09fb891 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 2.1E-31 T 19-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ALIDE2_RS13360 923c92ebbd43ec9726800a4cf09fb891 158 PIRSF PIRSF006092 1 158 1.5E-52 T 19-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 ALIDE2_RS13360 923c92ebbd43ec9726800a4cf09fb891 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.766 T 19-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 ALIDE2_RS13360 923c92ebbd43ec9726800a4cf09fb891 158 Gene3D G3DSA:1.10.287.180 1 75 1.9E-33 T 19-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ALIDE2_RS13360 923c92ebbd43ec9726800a4cf09fb891 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 4.2E-29 T 19-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ALIDE2_RS13360 923c92ebbd43ec9726800a4cf09fb891 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 19-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ALIDE2_RS17415 cfd3b831f6d26e88a775970b4e46cb6f 326 PANTHER PTHR10859 2 318 9.8E-121 T 19-04-2016 ALIDE2_RS17415 cfd3b831f6d26e88a775970b4e46cb6f 326 Pfam PF00535 Glycosyl transferase family 2 17 178 3.2E-31 T 19-04-2016 IPR001173 Glycosyltransferase 2-like ALIDE2_RS17415 cfd3b831f6d26e88a775970b4e46cb6f 326 Gene3D G3DSA:3.90.550.10 14 179 5.2E-27 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS17415 cfd3b831f6d26e88a775970b4e46cb6f 326 SUPERFAMILY SSF53448 12 255 6.75E-41 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS17415 cfd3b831f6d26e88a775970b4e46cb6f 326 PANTHER PTHR10859:SF86 2 318 9.8E-121 T 19-04-2016 ALIDE2_RS20055 6dc96f5aa10d0566fc666388f55141e7 307 PANTHER PTHR33694 1 307 6.7E-116 T 19-04-2016 ALIDE2_RS20055 6dc96f5aa10d0566fc666388f55141e7 307 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 284 45.597 T 19-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 ALIDE2_RS20055 6dc96f5aa10d0566fc666388f55141e7 307 SUPERFAMILY SSF54211 3 124 3.03E-39 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS20055 6dc96f5aa10d0566fc666388f55141e7 307 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3 303 4.1E-111 T 19-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 ALIDE2_RS20055 6dc96f5aa10d0566fc666388f55141e7 307 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 279 5.1E-102 T 19-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 ALIDE2_RS20055 6dc96f5aa10d0566fc666388f55141e7 307 PANTHER PTHR33694:SF1 1 307 6.7E-116 T 19-04-2016 ALIDE2_RS20055 6dc96f5aa10d0566fc666388f55141e7 307 SUPERFAMILY SSF54211 134 282 6.9E-48 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS20055 6dc96f5aa10d0566fc666388f55141e7 307 Gene3D G3DSA:3.30.230.20 3 124 9.6E-42 T 19-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 ALIDE2_RS20055 6dc96f5aa10d0566fc666388f55141e7 307 Gene3D G3DSA:3.30.1700.10 128 286 1.4E-55 T 19-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 ALIDE2_RS13700 ccc4a810ccc6da3c261112bfc79a1700 129 Gene3D G3DSA:3.40.50.9200 4 117 3.1E-5 T 19-04-2016 IPR015032 MTH538 TIR-like domain ALIDE2_RS13700 ccc4a810ccc6da3c261112bfc79a1700 129 SUPERFAMILY SSF52206 42 122 5.23E-7 T 19-04-2016 IPR015032 MTH538 TIR-like domain ALIDE2_RS13700 ccc4a810ccc6da3c261112bfc79a1700 129 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 5 94 2.9E-5 T 19-04-2016 IPR015032 MTH538 TIR-like domain ALIDE2_RS20310 cd85fcc7abcec2d25537e38857308281 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 322 3.8E-76 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS20310 cd85fcc7abcec2d25537e38857308281 325 PANTHER PTHR30349:SF16 5 322 2.9E-84 T 19-04-2016 ALIDE2_RS20310 cd85fcc7abcec2d25537e38857308281 325 PIRSF PIRSF017082 1 325 3.1E-76 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS20310 cd85fcc7abcec2d25537e38857308281 325 PANTHER PTHR30349 5 322 2.9E-84 T 19-04-2016 ALIDE2_RS20310 cd85fcc7abcec2d25537e38857308281 325 SUPERFAMILY SSF53850 113 285 5.74E-12 T 19-04-2016 ALIDE2_RS06560 fc682c5e3975456cf289719318fcad53 172 Gene3D G3DSA:3.30.1050.10 66 134 5.3E-9 T 19-04-2016 IPR003033 SCP2 sterol-binding domain ALIDE2_RS06560 fc682c5e3975456cf289719318fcad53 172 Pfam PF02036 SCP-2 sterol transfer family 51 131 6.1E-13 T 19-04-2016 IPR003033 SCP2 sterol-binding domain ALIDE2_RS06560 fc682c5e3975456cf289719318fcad53 172 SUPERFAMILY SSF55718 49 137 3.77E-16 T 19-04-2016 IPR003033 SCP2 sterol-binding domain ALIDE2_RS06560 fc682c5e3975456cf289719318fcad53 172 PANTHER PTHR10094 19 143 5.8E-26 T 19-04-2016 ALIDE2_RS06560 fc682c5e3975456cf289719318fcad53 172 PANTHER PTHR10094:SF16 19 143 5.8E-26 T 19-04-2016 ALIDE2_RS15500 10f36b30ae1d1752ad0f312132d29495 457 PANTHER PTHR24064 8 432 4.8E-104 T 19-04-2016 ALIDE2_RS15500 10f36b30ae1d1752ad0f312132d29495 457 PANTHER PTHR24064:SF234 8 432 4.8E-104 T 19-04-2016 ALIDE2_RS15500 10f36b30ae1d1752ad0f312132d29495 457 Pfam PF07690 Major Facilitator Superfamily 39 314 2.0E-36 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS15500 10f36b30ae1d1752ad0f312132d29495 457 SUPERFAMILY SSF103473 18 445 8.5E-81 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS15500 10f36b30ae1d1752ad0f312132d29495 457 ProSitePatterns PS00216 Sugar transport proteins signature 1. 86 103 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ALIDE2_RS15500 10f36b30ae1d1752ad0f312132d29495 457 Gene3D G3DSA:1.20.1250.20 28 211 1.8E-36 T 19-04-2016 ALIDE2_RS15500 10f36b30ae1d1752ad0f312132d29495 457 Gene3D G3DSA:1.20.1250.20 267 445 3.6E-26 T 19-04-2016 ALIDE2_RS15500 10f36b30ae1d1752ad0f312132d29495 457 ProSitePatterns PS00217 Sugar transport proteins signature 2. 128 153 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ALIDE2_RS10225 f8e2ea0e4a57d4d121fd2a709fd14321 1023 PANTHER PTHR30195:SF13 8 438 4.5E-303 T 19-04-2016 ALIDE2_RS10225 f8e2ea0e4a57d4d121fd2a709fd14321 1023 PANTHER PTHR30195:SF13 471 942 4.5E-303 T 19-04-2016 ALIDE2_RS10225 f8e2ea0e4a57d4d121fd2a709fd14321 1023 SMART SM00487 290 521 4.2E-11 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS10225 f8e2ea0e4a57d4d121fd2a709fd14321 1023 PANTHER PTHR30195 8 438 4.5E-303 T 19-04-2016 ALIDE2_RS10225 f8e2ea0e4a57d4d121fd2a709fd14321 1023 PANTHER PTHR30195 471 942 4.5E-303 T 19-04-2016 ALIDE2_RS10225 f8e2ea0e4a57d4d121fd2a709fd14321 1023 Gene3D G3DSA:3.40.50.300 481 496 1.1E-18 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10225 f8e2ea0e4a57d4d121fd2a709fd14321 1023 Gene3D G3DSA:3.40.50.300 282 448 1.1E-18 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10225 f8e2ea0e4a57d4d121fd2a709fd14321 1023 SUPERFAMILY SSF52540 481 501 3.17E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10225 f8e2ea0e4a57d4d121fd2a709fd14321 1023 SUPERFAMILY SSF52540 253 448 3.17E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10225 f8e2ea0e4a57d4d121fd2a709fd14321 1023 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 135 224 1.0E-15 T 19-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 ALIDE2_RS10225 f8e2ea0e4a57d4d121fd2a709fd14321 1023 SUPERFAMILY SSF52540 315 378 1.18E-5 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10225 f8e2ea0e4a57d4d121fd2a709fd14321 1023 SUPERFAMILY SSF52540 622 740 1.18E-5 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10225 f8e2ea0e4a57d4d121fd2a709fd14321 1023 Pfam PF04851 Type III restriction enzyme, res subunit 295 493 1.9E-11 T 19-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ALIDE2_RS19045 eb7b2e6acded360529d2ccb109aa2e61 265 Pfam PF01578 Cytochrome C assembly protein 46 259 3.6E-27 T 19-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ALIDE2_RS19045 eb7b2e6acded360529d2ccb109aa2e61 265 PANTHER PTHR38034 4 262 1.0E-34 T 19-04-2016 ALIDE2_RS05750 553dd7b7f1fdac01c06675fbd33b346e 269 PANTHER PTHR11941 1 266 2.6E-79 T 19-04-2016 ALIDE2_RS05750 553dd7b7f1fdac01c06675fbd33b346e 269 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 268 1.1E-57 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS05750 553dd7b7f1fdac01c06675fbd33b346e 269 Gene3D G3DSA:3.90.226.10 4 263 4.4E-76 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS05750 553dd7b7f1fdac01c06675fbd33b346e 269 SUPERFAMILY SSF52096 5 268 5.62E-79 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS03135 939e717068a67b40a57114216772eb6b 214 Pfam PF01464 Transglycosylase SLT domain 84 189 4.5E-29 T 19-04-2016 IPR008258 Transglycosylase SLT domain 1 ALIDE2_RS03135 939e717068a67b40a57114216772eb6b 214 PANTHER PTHR21666 81 209 3.4E-35 T 19-04-2016 ALIDE2_RS03135 939e717068a67b40a57114216772eb6b 214 Gene3D G3DSA:1.10.530.10 80 212 3.1E-44 T 19-04-2016 ALIDE2_RS03135 939e717068a67b40a57114216772eb6b 214 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 101 129 - T 19-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 ALIDE2_RS03135 939e717068a67b40a57114216772eb6b 214 Pfam PF13511 Domain of unknown function (DUF4124) 14 61 2.9E-7 T 19-04-2016 IPR025392 Domain of unknown function DUF4124 ALIDE2_RS03135 939e717068a67b40a57114216772eb6b 214 SUPERFAMILY SSF53955 77 212 1.18E-41 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS14650 4005b8b624b8bcac9f0e23c21923ea9c 320 PANTHER PTHR11707 8 258 7.2E-50 T 19-04-2016 ALIDE2_RS14650 4005b8b624b8bcac9f0e23c21923ea9c 320 Gene3D G3DSA:3.40.50.1170 6 199 1.2E-57 T 19-04-2016 IPR027474 L-asparaginase, N-terminal ALIDE2_RS14650 4005b8b624b8bcac9f0e23c21923ea9c 320 PIRSF PIRSF001220 4 320 1.0E-65 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 ALIDE2_RS14650 4005b8b624b8bcac9f0e23c21923ea9c 320 SMART SM00870 8 318 1.3E-105 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 ALIDE2_RS14650 4005b8b624b8bcac9f0e23c21923ea9c 320 Pfam PF00710 Asparaginase, N-terminal 8 198 6.9E-53 T 19-04-2016 IPR027474 L-asparaginase, N-terminal ALIDE2_RS14650 4005b8b624b8bcac9f0e23c21923ea9c 320 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 11 19 - T 19-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 ALIDE2_RS14650 4005b8b624b8bcac9f0e23c21923ea9c 320 PIRSF PIRSF500176 5 315 8.2E-62 T 19-04-2016 ALIDE2_RS14650 4005b8b624b8bcac9f0e23c21923ea9c 320 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 92 102 - T 19-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 ALIDE2_RS14650 4005b8b624b8bcac9f0e23c21923ea9c 320 SUPERFAMILY SSF53774 5 317 1.96E-81 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 ALIDE2_RS14650 4005b8b624b8bcac9f0e23c21923ea9c 320 PANTHER PTHR11707:SF29 8 258 7.2E-50 T 19-04-2016 ALIDE2_RS14650 4005b8b624b8bcac9f0e23c21923ea9c 320 Gene3D G3DSA:3.40.50.40 224 318 3.1E-30 T 19-04-2016 IPR027473 L-asparaginase, C-terminal domain ALIDE2_RS14650 4005b8b624b8bcac9f0e23c21923ea9c 320 PRINTS PR00139 Asparaginase/glutaminase family signature 91 109 1.5E-15 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 ALIDE2_RS14650 4005b8b624b8bcac9f0e23c21923ea9c 320 PRINTS PR00139 Asparaginase/glutaminase family signature 9 20 1.5E-15 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 ALIDE2_RS14650 4005b8b624b8bcac9f0e23c21923ea9c 320 PRINTS PR00139 Asparaginase/glutaminase family signature 271 289 1.5E-15 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 ALIDE2_RS10300 5242a8bc7f7b2eaaa84899ffd98d5dcf 223 SUPERFAMILY SSF143081 2 215 4.32E-52 T 19-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS10300 5242a8bc7f7b2eaaa84899ffd98d5dcf 223 Gene3D G3DSA:3.90.1680.10 1 217 6.3E-38 T 19-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS10300 5242a8bc7f7b2eaaa84899ffd98d5dcf 223 Pfam PF02586 SOS response associated peptidase (SRAP) 1 216 2.7E-30 T 19-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS10300 5242a8bc7f7b2eaaa84899ffd98d5dcf 223 PANTHER PTHR13604 2 215 5.7E-23 T 19-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS22430 e0f97aa00040b72f9a18ed6d73596f21 157 PANTHER PTHR10516 1 81 4.3E-16 T 19-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type ALIDE2_RS22430 e0f97aa00040b72f9a18ed6d73596f21 157 PANTHER PTHR10516 126 157 4.3E-16 T 19-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type ALIDE2_RS22430 e0f97aa00040b72f9a18ed6d73596f21 157 PANTHER PTHR10516:SF316 1 81 4.3E-16 T 19-04-2016 ALIDE2_RS22430 e0f97aa00040b72f9a18ed6d73596f21 157 PANTHER PTHR10516:SF316 126 157 4.3E-16 T 19-04-2016 ALIDE2_RS22430 e0f97aa00040b72f9a18ed6d73596f21 157 SUPERFAMILY SSF54534 3 137 6.09E-22 T 19-04-2016 ALIDE2_RS22430 e0f97aa00040b72f9a18ed6d73596f21 157 Gene3D G3DSA:3.10.50.40 3 67 4.4E-7 T 19-04-2016 ALIDE2_RS22430 e0f97aa00040b72f9a18ed6d73596f21 157 Gene3D G3DSA:3.10.50.40 119 136 4.4E-7 T 19-04-2016 ALIDE2_RS17070 1425afa6cd7943b49ce041b64c70f45d 321 PIRSF PIRSF037112 16 314 8.5E-102 T 19-04-2016 IPR017113 Antirestriction, ArdC ALIDE2_RS17070 1425afa6cd7943b49ce041b64c70f45d 321 Pfam PF08401 Domain of unknown function (DUF1738) 26 147 2.3E-36 T 19-04-2016 IPR013610 Domain of unknown function DUF1738 ALIDE2_RS23215 1a24833844ad2000bc56a3edb8f82d02 539 SUPERFAMILY SSF56235 3 528 3.09E-146 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS23215 1a24833844ad2000bc56a3edb8f82d02 539 Pfam PF01019 Gamma-glutamyltranspeptidase 20 532 3.2E-124 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS23215 1a24833844ad2000bc56a3edb8f82d02 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 128 147 4.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS23215 1a24833844ad2000bc56a3edb8f82d02 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 438 455 4.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS23215 1a24833844ad2000bc56a3edb8f82d02 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 414 429 4.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS23215 1a24833844ad2000bc56a3edb8f82d02 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 235 251 4.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS23215 1a24833844ad2000bc56a3edb8f82d02 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 27 52 4.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS23215 1a24833844ad2000bc56a3edb8f82d02 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 264 283 4.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS23215 1a24833844ad2000bc56a3edb8f82d02 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 361 379 4.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS23215 1a24833844ad2000bc56a3edb8f82d02 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 383 401 4.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS23215 1a24833844ad2000bc56a3edb8f82d02 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 110 128 4.0E-59 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS23215 1a24833844ad2000bc56a3edb8f82d02 539 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 6 528 1.4E-111 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS23215 1a24833844ad2000bc56a3edb8f82d02 539 PANTHER PTHR11686 3 534 1.6E-137 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS08900 6e5979dd282c23bd8b0c4fb05d30f804 206 SUPERFAMILY SSF53955 116 191 8.44E-15 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS08900 6e5979dd282c23bd8b0c4fb05d30f804 206 SUPERFAMILY SSF53955 46 88 8.44E-15 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS08900 6e5979dd282c23bd8b0c4fb05d30f804 206 Gene3D G3DSA:1.10.530.10 48 176 8.5E-10 T 19-04-2016 ALIDE2_RS11725 7e1cc3ef71185006139d26404194452a 495 PANTHER PTHR30001 1 495 1.4E-190 T 19-04-2016 ALIDE2_RS11725 7e1cc3ef71185006139d26404194452a 495 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 432 3.0E-145 T 19-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 ALIDE2_RS11725 7e1cc3ef71185006139d26404194452a 495 SUPERFAMILY SSF50249 39 130 4.46E-15 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS11725 7e1cc3ef71185006139d26404194452a 495 Gene3D G3DSA:2.40.50.140 30 130 9.4E-30 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS11725 7e1cc3ef71185006139d26404194452a 495 Pfam PF10150 Ribonuclease E/G family 126 399 4.8E-95 T 19-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 ALIDE2_RS11725 7e1cc3ef71185006139d26404194452a 495 SMART SM00316 37 124 4.1E-4 T 19-04-2016 IPR022967 RNA-binding domain, S1 ALIDE2_RS17430 b2a849cd202f738c17f2bede4f4f06b3 224 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 193 1.2E-26 T 19-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 ALIDE2_RS17430 b2a849cd202f738c17f2bede4f4f06b3 224 PANTHER PTHR10000:SF10 1 214 8.5E-51 T 19-04-2016 ALIDE2_RS17430 b2a849cd202f738c17f2bede4f4f06b3 224 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 205 7.7E-44 T 19-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial ALIDE2_RS17430 b2a849cd202f738c17f2bede4f4f06b3 224 SUPERFAMILY SSF56784 1 207 4.91E-35 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS17430 b2a849cd202f738c17f2bede4f4f06b3 224 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 191 7.1E-38 T 19-04-2016 ALIDE2_RS17430 b2a849cd202f738c17f2bede4f4f06b3 224 Gene3D G3DSA:1.20.1440.100 15 81 8.8E-29 T 19-04-2016 ALIDE2_RS17430 b2a849cd202f738c17f2bede4f4f06b3 224 PANTHER PTHR10000 1 214 8.5E-51 T 19-04-2016 ALIDE2_RS17430 b2a849cd202f738c17f2bede4f4f06b3 224 Gene3D G3DSA:3.40.50.1000 82 220 1.7E-48 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS00945 3a4b5ba5670532666bf024b15cbfc8d4 396 Gene3D G3DSA:3.30.1540.10 220 304 1.3E-25 T 19-04-2016 ALIDE2_RS00945 3a4b5ba5670532666bf024b15cbfc8d4 396 Pfam PF02515 CoA-transferase family III 5 370 1.3E-112 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS00945 3a4b5ba5670532666bf024b15cbfc8d4 396 Gene3D G3DSA:3.40.50.10540 2 214 1.6E-99 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00945 3a4b5ba5670532666bf024b15cbfc8d4 396 Gene3D G3DSA:3.40.50.10540 305 387 1.6E-99 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00945 3a4b5ba5670532666bf024b15cbfc8d4 396 SUPERFAMILY SSF89796 3 388 1.44E-125 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00945 3a4b5ba5670532666bf024b15cbfc8d4 396 PANTHER PTHR24023 242 380 5.3E-30 T 19-04-2016 ALIDE2_RS00945 3a4b5ba5670532666bf024b15cbfc8d4 396 PANTHER PTHR24023 42 215 5.3E-30 T 19-04-2016 ALIDE2_RS00945 3a4b5ba5670532666bf024b15cbfc8d4 396 PANTHER PTHR24023:SF593 242 380 5.3E-30 T 19-04-2016 ALIDE2_RS00945 3a4b5ba5670532666bf024b15cbfc8d4 396 PANTHER PTHR24023:SF593 42 215 5.3E-30 T 19-04-2016 ALIDE2_RS01400 a108cd9b811a80774200c7a88efd0262 304 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 117 1.8E-12 T 19-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ALIDE2_RS01400 a108cd9b811a80774200c7a88efd0262 304 SUPERFAMILY SSF55347 131 269 1.11E-60 T 19-04-2016 ALIDE2_RS01400 a108cd9b811a80774200c7a88efd0262 304 PIRSF PIRSF015689 1 298 5.0E-135 T 19-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 ALIDE2_RS01400 a108cd9b811a80774200c7a88efd0262 304 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 304 151.311 T 19-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 ALIDE2_RS01400 a108cd9b811a80774200c7a88efd0262 304 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 131 268 5.3E-66 T 19-04-2016 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 ALIDE2_RS01400 a108cd9b811a80774200c7a88efd0262 304 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 4 293 4.2E-145 T 19-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 ALIDE2_RS01400 a108cd9b811a80774200c7a88efd0262 304 PANTHER PTHR41706 1 300 3.1E-123 T 19-04-2016 ALIDE2_RS01400 a108cd9b811a80774200c7a88efd0262 304 Gene3D G3DSA:3.40.50.720 1 143 1.0E-73 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS01400 a108cd9b811a80774200c7a88efd0262 304 SMART SM00859 6 121 7.9E-6 T 19-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ALIDE2_RS01400 a108cd9b811a80774200c7a88efd0262 304 SUPERFAMILY SSF51735 1 155 4.27E-30 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS01400 a108cd9b811a80774200c7a88efd0262 304 Gene3D G3DSA:3.30.360.10 144 268 2.4E-67 T 19-04-2016 ALIDE2_RS04455 5bec485fba09450469cd2ebd91812ccb 224 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.2E-7 T 19-04-2016 IPR020476 NUDIX hydrolase ALIDE2_RS04455 5bec485fba09450469cd2ebd91812ccb 224 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.2E-7 T 19-04-2016 IPR020476 NUDIX hydrolase ALIDE2_RS04455 5bec485fba09450469cd2ebd91812ccb 224 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 19-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ALIDE2_RS04455 5bec485fba09450469cd2ebd91812ccb 224 SUPERFAMILY SSF55811 6 163 2.57E-30 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS04455 5bec485fba09450469cd2ebd91812ccb 224 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.424 T 19-04-2016 IPR022927 RNA pyrophosphohydrolase RppH ALIDE2_RS04455 5bec485fba09450469cd2ebd91812ccb 224 Pfam PF00293 NUDIX domain 7 136 1.4E-24 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ALIDE2_RS04455 5bec485fba09450469cd2ebd91812ccb 224 Gene3D G3DSA:3.90.79.10 7 152 6.1E-29 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS04455 5bec485fba09450469cd2ebd91812ccb 224 PANTHER PTHR23114 1 169 4.8E-39 T 19-04-2016 ALIDE2_RS09895 bfc66f812d358c5ef34f9a38527c7c41 369 SUPERFAMILY SSF53383 3 366 8.91E-111 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS09895 bfc66f812d358c5ef34f9a38527c7c41 369 Gene3D G3DSA:3.40.640.10 17 261 1.5E-104 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS09895 bfc66f812d358c5ef34f9a38527c7c41 369 PANTHER PTHR21152:SF1 1 366 3.3E-168 T 19-04-2016 ALIDE2_RS09895 bfc66f812d358c5ef34f9a38527c7c41 369 Pfam PF00266 Aminotransferase class-V 5 357 8.8E-47 T 19-04-2016 IPR000192 Aminotransferase class V domain ALIDE2_RS09895 bfc66f812d358c5ef34f9a38527c7c41 369 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 19-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ALIDE2_RS09895 bfc66f812d358c5ef34f9a38527c7c41 369 PANTHER PTHR21152 1 366 3.3E-168 T 19-04-2016 ALIDE2_RS09895 bfc66f812d358c5ef34f9a38527c7c41 369 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 366 3.1E-144 T 19-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 ALIDE2_RS09895 bfc66f812d358c5ef34f9a38527c7c41 369 Gene3D G3DSA:3.90.1150.10 268 366 2.7E-41 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS09895 bfc66f812d358c5ef34f9a38527c7c41 369 PIRSF PIRSF000525 1 369 8.6E-143 T 19-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 ALIDE2_RS09895 bfc66f812d358c5ef34f9a38527c7c41 369 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 368 47.612 T 19-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 ALIDE2_RS07665 1c03af92fc66c9f2b47e824690e1ec20 356 Gene3D G3DSA:3.90.180.10 1 185 2.8E-50 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS07665 1c03af92fc66c9f2b47e824690e1ec20 356 PANTHER PTHR11695 63 356 6.1E-94 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS07665 1c03af92fc66c9f2b47e824690e1ec20 356 PANTHER PTHR11695 12 47 6.1E-94 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS07665 1c03af92fc66c9f2b47e824690e1ec20 356 SUPERFAMILY SSF51735 154 322 1.51E-40 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS07665 1c03af92fc66c9f2b47e824690e1ec20 356 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 149 9.0E-25 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ALIDE2_RS07665 1c03af92fc66c9f2b47e824690e1ec20 356 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 74 88 - T 19-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS07665 1c03af92fc66c9f2b47e824690e1ec20 356 SUPERFAMILY SSF50129 1 188 2.52E-44 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS07665 1c03af92fc66c9f2b47e824690e1ec20 356 Pfam PF00107 Zinc-binding dehydrogenase 191 314 9.7E-28 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ALIDE2_RS07665 1c03af92fc66c9f2b47e824690e1ec20 356 Gene3D G3DSA:3.40.50.720 186 302 1.3E-33 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS07665 1c03af92fc66c9f2b47e824690e1ec20 356 SMART SM00829 8 354 4.9E-5 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ALIDE2_RS03065 59805211ab49decb3cf1f93e9f3098c7 160 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03065 59805211ab49decb3cf1f93e9f3098c7 160 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 34 1.3E-7 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03065 59805211ab49decb3cf1f93e9f3098c7 160 Gene3D G3DSA:3.30.700.10 15 74 1.6E-4 T 19-04-2016 ALIDE2_RS03065 59805211ab49decb3cf1f93e9f3098c7 160 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 11 34 7.7E-8 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03065 59805211ab49decb3cf1f93e9f3098c7 160 SUPERFAMILY SSF54523 15 126 1.02E-14 T 19-04-2016 ALIDE2_RS03065 59805211ab49decb3cf1f93e9f3098c7 160 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 11 147 6.7E-13 T 19-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 ALIDE2_RS17395 631785265529e0ceb727541ff5b41fef 323 PANTHER PTHR30349 1 291 3.2E-84 T 19-04-2016 ALIDE2_RS17395 631785265529e0ceb727541ff5b41fef 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 318 6.2E-88 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS17395 631785265529e0ceb727541ff5b41fef 323 PANTHER PTHR30349:SF32 1 291 3.2E-84 T 19-04-2016 ALIDE2_RS17395 631785265529e0ceb727541ff5b41fef 323 PIRSF PIRSF017082 1 322 2.2E-72 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS17395 631785265529e0ceb727541ff5b41fef 323 SUPERFAMILY SSF53850 107 286 2.17E-11 T 19-04-2016 ALIDE2_RS10375 6547cf05511e118e1171acc9ed099778 300 SUPERFAMILY SSF53850 87 299 8.51E-26 T 19-04-2016 ALIDE2_RS10375 6547cf05511e118e1171acc9ed099778 300 Pfam PF03466 LysR substrate binding domain 91 298 4.0E-24 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS10375 6547cf05511e118e1171acc9ed099778 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS10375 6547cf05511e118e1171acc9ed099778 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS10375 6547cf05511e118e1171acc9ed099778 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS10375 6547cf05511e118e1171acc9ed099778 300 Gene3D G3DSA:3.40.190.10 81 201 6.9E-11 T 19-04-2016 ALIDE2_RS10375 6547cf05511e118e1171acc9ed099778 300 PANTHER PTHR30126 1 298 2.6E-48 T 19-04-2016 ALIDE2_RS10375 6547cf05511e118e1171acc9ed099778 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.1E-22 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS10375 6547cf05511e118e1171acc9ed099778 300 Gene3D G3DSA:1.10.10.10 1 80 7.1E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS10375 6547cf05511e118e1171acc9ed099778 300 SUPERFAMILY SSF46785 1 82 2.0E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS13410 c18805a13ed161554143ee0a2d72ab32 145 SUPERFAMILY SSF55729 38 125 1.95E-7 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS13410 c18805a13ed161554143ee0a2d72ab32 145 Gene3D G3DSA:3.40.630.30 46 132 5.2E-6 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS05600 b05b08dee830d3d4a4e00a6383e65c8c 45 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 8 45 3.0E-11 T 19-04-2016 IPR008621 Cbb3-type cytochrome oxidase component ALIDE2_RS01255 1a4b84dc2668a2aeca9901a4d15caa3b 186 SUPERFAMILY SSF52833 8 162 1.04E-22 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS01255 1a4b84dc2668a2aeca9901a4d15caa3b 186 Gene3D G3DSA:3.40.30.10 8 159 1.6E-38 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS01255 1a4b84dc2668a2aeca9901a4d15caa3b 186 Pfam PF00578 AhpC/TSA family 21 136 1.0E-7 T 19-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS00810 7246e428dcb24fb4b7234dd209c8d357 302 Gene3D G3DSA:1.10.10.10 7 87 1.5E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00810 7246e428dcb24fb4b7234dd209c8d357 302 SUPERFAMILY SSF53850 96 294 8.69E-28 T 19-04-2016 ALIDE2_RS00810 7246e428dcb24fb4b7234dd209c8d357 302 PANTHER PTHR30537:SF26 1 293 8.6E-60 T 19-04-2016 ALIDE2_RS00810 7246e428dcb24fb4b7234dd209c8d357 302 Pfam PF03466 LysR substrate binding domain 95 292 1.0E-24 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS00810 7246e428dcb24fb4b7234dd209c8d357 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 5.4E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS00810 7246e428dcb24fb4b7234dd209c8d357 302 SUPERFAMILY SSF46785 6 87 3.31E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00810 7246e428dcb24fb4b7234dd209c8d357 302 PANTHER PTHR30537 1 293 8.6E-60 T 19-04-2016 ALIDE2_RS00810 7246e428dcb24fb4b7234dd209c8d357 302 Gene3D G3DSA:3.40.190.10 182 262 8.2E-24 T 19-04-2016 ALIDE2_RS00810 7246e428dcb24fb4b7234dd209c8d357 302 Gene3D G3DSA:3.40.190.10 97 181 9.7E-22 T 19-04-2016 ALIDE2_RS14705 f1ade764e8977839393b073171366ccc 149 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 124 4.5E-24 T 19-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ALIDE2_RS14705 f1ade764e8977839393b073171366ccc 149 Gene3D G3DSA:3.10.180.10 1 128 4.4E-46 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS14705 f1ade764e8977839393b073171366ccc 149 SUPERFAMILY SSF54593 1 132 8.99E-36 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS14705 f1ade764e8977839393b073171366ccc 149 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 131 1.7E-63 T 19-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 ALIDE2_RS14705 f1ade764e8977839393b073171366ccc 149 ProSitePatterns PS00935 Glyoxalase I signature 2. 70 82 - T 19-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 ALIDE2_RS14705 f1ade764e8977839393b073171366ccc 149 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 19-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 ALIDE2_RS14705 f1ade764e8977839393b073171366ccc 149 PANTHER PTHR10374 1 126 3.7E-59 T 19-04-2016 ALIDE2_RS18075 13576ac7f64758a67dbfd14394a14d4c 649 Pfam PF05787 Bacterial protein of unknown function (DUF839) 206 559 7.3E-18 T 19-04-2016 IPR008557 Protein of unknown function DUF839 ALIDE2_RS20910 348436bfa5ed12442754baddd4a50fdc 210 PANTHER PTHR22617:SF32 48 210 3.6E-23 T 19-04-2016 ALIDE2_RS20910 348436bfa5ed12442754baddd4a50fdc 210 PANTHER PTHR22617 48 210 3.6E-23 T 19-04-2016 ALIDE2_RS20910 348436bfa5ed12442754baddd4a50fdc 210 Gene3D G3DSA:1.10.287.500 36 160 1.8E-33 T 19-04-2016 ALIDE2_RS20910 348436bfa5ed12442754baddd4a50fdc 210 PIRSF PIRSF002884 1 210 1.2E-54 T 19-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- ALIDE2_RS20910 348436bfa5ed12442754baddd4a50fdc 210 Pfam PF04344 Chemotaxis phosphatase, CheZ 17 210 7.8E-60 T 19-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- ALIDE2_RS20910 348436bfa5ed12442754baddd4a50fdc 210 SUPERFAMILY SSF75708 11 209 1.27E-53 T 19-04-2016 ALIDE2_RS18865 3d86a54f7cc1a65d6b6cef668ffeae3d 428 PANTHER PTHR33525 26 350 1.4E-67 T 19-04-2016 ALIDE2_RS18865 3d86a54f7cc1a65d6b6cef668ffeae3d 428 SMART SM00052 16 220 9.6E-4 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS18865 3d86a54f7cc1a65d6b6cef668ffeae3d 428 SUPERFAMILY SSF109604 206 424 4.71E-38 T 19-04-2016 ALIDE2_RS18865 3d86a54f7cc1a65d6b6cef668ffeae3d 428 PANTHER PTHR33525:SF4 26 350 1.4E-67 T 19-04-2016 ALIDE2_RS18865 3d86a54f7cc1a65d6b6cef668ffeae3d 428 Gene3D G3DSA:3.20.20.450 100 206 4.8E-11 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS18865 3d86a54f7cc1a65d6b6cef668ffeae3d 428 Gene3D G3DSA:1.10.3150.10 207 423 2.8E-34 T 19-04-2016 IPR013976 Metal-dependent hydrolase HDOD ALIDE2_RS18865 3d86a54f7cc1a65d6b6cef668ffeae3d 428 Pfam PF00563 EAL domain 98 215 4.1E-10 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS18865 3d86a54f7cc1a65d6b6cef668ffeae3d 428 Pfam PF08668 HDOD domain 232 343 1.0E-11 T 19-04-2016 IPR013976 Metal-dependent hydrolase HDOD ALIDE2_RS18865 3d86a54f7cc1a65d6b6cef668ffeae3d 428 SUPERFAMILY SSF141868 24 220 3.53E-21 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS18865 3d86a54f7cc1a65d6b6cef668ffeae3d 428 PIRSF PIRSF003180 24 427 7.2E-93 T 19-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing ALIDE2_RS20240 c7cdf499da352bc83bb89d8d96a138dc 585 Gene3D G3DSA:1.10.287.130 339 407 4.8E-19 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS20240 c7cdf499da352bc83bb89d8d96a138dc 585 PANTHER PTHR24423:SF382 344 570 1.7E-79 T 19-04-2016 ALIDE2_RS20240 c7cdf499da352bc83bb89d8d96a138dc 585 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 459 570 3.5E-27 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20240 c7cdf499da352bc83bb89d8d96a138dc 585 SUPERFAMILY SSF55874 401 572 2.75E-43 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20240 c7cdf499da352bc83bb89d8d96a138dc 585 SUPERFAMILY SSF47384 332 412 3.14E-19 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS20240 c7cdf499da352bc83bb89d8d96a138dc 585 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 524 1.7E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS20240 c7cdf499da352bc83bb89d8d96a138dc 585 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 510 1.7E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS20240 c7cdf499da352bc83bb89d8d96a138dc 585 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 568 1.7E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS20240 c7cdf499da352bc83bb89d8d96a138dc 585 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 549 1.7E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 ALIDE2_RS20240 c7cdf499da352bc83bb89d8d96a138dc 585 SMART SM00387 458 571 3.2E-37 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS20240 c7cdf499da352bc83bb89d8d96a138dc 585 SMART SM00388 346 411 4.6E-20 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS20240 c7cdf499da352bc83bb89d8d96a138dc 585 PANTHER PTHR24423 344 570 1.7E-79 T 19-04-2016 ALIDE2_RS20240 c7cdf499da352bc83bb89d8d96a138dc 585 Pfam PF00512 His Kinase A (phospho-acceptor) domain 346 411 2.3E-17 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ALIDE2_RS20240 c7cdf499da352bc83bb89d8d96a138dc 585 Gene3D G3DSA:3.30.565.10 413 576 3.1E-43 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS16970 805928ca1973eadd960b1226d7ca2b4e 714 Pfam PF01968 Hydantoinase/oxoprolinase 223 508 5.3E-77 T 19-04-2016 IPR002821 Hydantoinase/oxoprolinase GO:0016787 ALIDE2_RS16970 805928ca1973eadd960b1226d7ca2b4e 714 PANTHER PTHR11365:SF2 1 706 1.3E-65 T 19-04-2016 ALIDE2_RS16970 805928ca1973eadd960b1226d7ca2b4e 714 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 10 198 1.2E-38 T 19-04-2016 IPR008040 Hydantoinaseoxoprolinase, N-terminal ALIDE2_RS16970 805928ca1973eadd960b1226d7ca2b4e 714 SUPERFAMILY SSF53067 9 84 1.15E-7 T 19-04-2016 ALIDE2_RS16970 805928ca1973eadd960b1226d7ca2b4e 714 SUPERFAMILY SSF53067 279 325 1.15E-7 T 19-04-2016 ALIDE2_RS16970 805928ca1973eadd960b1226d7ca2b4e 714 PANTHER PTHR11365 1 706 1.3E-65 T 19-04-2016 ALIDE2_RS03180 8b50d82e38561e0586e0c019c01acb92 277 SUPERFAMILY SSF54637 128 274 5.52E-24 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS03180 8b50d82e38561e0586e0c019c01acb92 277 Gene3D G3DSA:3.10.129.10 60 116 4.3E-5 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS03180 8b50d82e38561e0586e0c019c01acb92 277 SUPERFAMILY SSF54637 7 113 1.93E-7 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS03180 8b50d82e38561e0586e0c019c01acb92 277 Pfam PF13622 Thioesterase-like superfamily 29 274 5.7E-45 T 19-04-2016 ALIDE2_RS10330 0dc579feb13a24e9f3f00cbcc0174bc9 148 Pfam PF11149 Protein of unknown function (DUF2924) 10 143 2.5E-45 T 19-04-2016 IPR021322 Protein of unknown function DUF2924 ALIDE2_RS17410 58dd8d9c7519ceb9e30b9d991f05e4f0 525 PANTHER PTHR33908 1 378 6.9E-56 T 19-04-2016 ALIDE2_RS17410 58dd8d9c7519ceb9e30b9d991f05e4f0 525 PANTHER PTHR33908:SF3 1 378 6.9E-56 T 19-04-2016 ALIDE2_RS17410 58dd8d9c7519ceb9e30b9d991f05e4f0 525 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 67 229 8.5E-13 T 19-04-2016 ALIDE2_RS18035 bc4982029b91282eb2d7f44ef70cc4c3 271 Gene3D G3DSA:3.40.50.720 9 268 5.4E-78 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS18035 bc4982029b91282eb2d7f44ef70cc4c3 271 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS18035 bc4982029b91282eb2d7f44ef70cc4c3 271 SUPERFAMILY SSF51735 13 268 3.1E-73 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS18035 bc4982029b91282eb2d7f44ef70cc4c3 271 PANTHER PTHR24321:SF6 11 268 4.9E-43 T 19-04-2016 ALIDE2_RS18035 bc4982029b91282eb2d7f44ef70cc4c3 271 PANTHER PTHR24321 11 268 4.9E-43 T 19-04-2016 ALIDE2_RS18035 bc4982029b91282eb2d7f44ef70cc4c3 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 1.3E-11 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS18035 bc4982029b91282eb2d7f44ef70cc4c3 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 1.3E-11 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS18035 bc4982029b91282eb2d7f44ef70cc4c3 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 1.3E-11 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS18035 bc4982029b91282eb2d7f44ef70cc4c3 271 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 266 2.4E-61 T 19-04-2016 ALIDE2_RS18035 bc4982029b91282eb2d7f44ef70cc4c3 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 3.5E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS18035 bc4982029b91282eb2d7f44ef70cc4c3 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 3.5E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS18035 bc4982029b91282eb2d7f44ef70cc4c3 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 3.5E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS18035 bc4982029b91282eb2d7f44ef70cc4c3 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 3.5E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS18035 bc4982029b91282eb2d7f44ef70cc4c3 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 230 250 3.5E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS23405 af8acbd255fb8e922b9659e1ac32428a 144 PANTHER PTHR24012 3 143 8.8E-33 T 19-04-2016 ALIDE2_RS23405 af8acbd255fb8e922b9659e1ac32428a 144 Gene3D G3DSA:3.30.70.330 2 99 8.3E-32 T 19-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 ALIDE2_RS23405 af8acbd255fb8e922b9659e1ac32428a 144 SUPERFAMILY SSF54928 3 113 7.52E-37 T 19-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 ALIDE2_RS23405 af8acbd255fb8e922b9659e1ac32428a 144 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 74 4.0E-24 T 19-04-2016 IPR000504 RNA recognition motif domain GO:0003676 ALIDE2_RS23405 af8acbd255fb8e922b9659e1ac32428a 144 SMART SM00360 4 77 8.3E-31 T 19-04-2016 IPR000504 RNA recognition motif domain GO:0003676 ALIDE2_RS13440 39f172e5cd52f2409918a04d316182c8 88 Gene3D G3DSA:1.10.10.60 9 83 3.5E-11 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS13440 39f172e5cd52f2409918a04d316182c8 88 SUPERFAMILY SSF46689 1 69 1.97E-13 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS13440 39f172e5cd52f2409918a04d316182c8 88 Pfam PF01527 Transposase 2 71 5.9E-22 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS13440 39f172e5cd52f2409918a04d316182c8 88 PANTHER PTHR33609 2 87 4.8E-42 T 19-04-2016 ALIDE2_RS11190 9fc4a5795294306ac93e09fef9ada0f0 210 Gene3D G3DSA:1.20.120.80 29 208 4.9E-53 T 19-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 ALIDE2_RS11190 9fc4a5795294306ac93e09fef9ada0f0 210 Pfam PF00510 Cytochrome c oxidase subunit III 15 208 5.0E-19 T 19-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 ALIDE2_RS11190 9fc4a5795294306ac93e09fef9ada0f0 210 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 32 210 6.1E-81 T 19-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 ALIDE2_RS11190 9fc4a5795294306ac93e09fef9ada0f0 210 PANTHER PTHR11403:SF2 23 210 1.3E-93 T 19-04-2016 ALIDE2_RS11190 9fc4a5795294306ac93e09fef9ada0f0 210 PANTHER PTHR11403 23 210 1.3E-93 T 19-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 ALIDE2_RS11190 9fc4a5795294306ac93e09fef9ada0f0 210 SUPERFAMILY SSF81452 15 208 9.55E-59 T 19-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 ALIDE2_RS16200 ec2315e2a063c2cd74aded37f3a40925 123 Gene3D G3DSA:1.10.287.90 72 116 4.8E-4 T 19-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 ALIDE2_RS16200 ec2315e2a063c2cd74aded37f3a40925 123 PANTHER PTHR34703 8 99 5.1E-17 T 19-04-2016 ALIDE2_RS16200 ec2315e2a063c2cd74aded37f3a40925 123 PANTHER PTHR34703:SF1 8 99 5.1E-17 T 19-04-2016 ALIDE2_RS16200 ec2315e2a063c2cd74aded37f3a40925 123 Pfam PF03334 Na+/H+ antiporter subunit 17 97 6.8E-18 T 19-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 ALIDE2_RS16080 561ad55968a7fe385f600e732ba9f7db 266 Gene3D G3DSA:1.10.3720.10 66 261 3.3E-36 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS16080 561ad55968a7fe385f600e732ba9f7db 266 SUPERFAMILY SSF161098 65 251 7.59E-36 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS16080 561ad55968a7fe385f600e732ba9f7db 266 PANTHER PTHR30614 21 261 1.5E-53 T 19-04-2016 ALIDE2_RS16080 561ad55968a7fe385f600e732ba9f7db 266 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 63 160 2.9E-19 T 19-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 ALIDE2_RS16080 561ad55968a7fe385f600e732ba9f7db 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 256 1.5E-15 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS11075 1ac4149b94983029ec5fdda3c08319d6 155 Gene3D G3DSA:1.10.150.120 75 152 1.7E-36 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 ALIDE2_RS11075 1ac4149b94983029ec5fdda3c08319d6 155 SUPERFAMILY SSF54292 1 78 2.88E-24 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS11075 1ac4149b94983029ec5fdda3c08319d6 155 PANTHER PTHR11908 1 148 7.7E-48 T 19-04-2016 ALIDE2_RS11075 1ac4149b94983029ec5fdda3c08319d6 155 Gene3D G3DSA:3.10.20.30 1 74 1.5E-29 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS11075 1ac4149b94983029ec5fdda3c08319d6 155 SUPERFAMILY SSF47741 85 152 2.75E-33 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 ALIDE2_RS11075 1ac4149b94983029ec5fdda3c08319d6 155 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 53 4.5E-6 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS11075 1ac4149b94983029ec5fdda3c08319d6 155 Pfam PF01799 [2Fe-2S] binding domain 73 146 9.4E-32 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 ALIDE2_RS11075 1ac4149b94983029ec5fdda3c08319d6 155 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 19-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ALIDE2_RS08110 5477e3f27375f3f2d33cb636c4d80c5e 90 Gene3D G3DSA:4.10.520.10 1 90 6.6E-37 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ALIDE2_RS08110 5477e3f27375f3f2d33cb636c4d80c5e 90 SUPERFAMILY SSF47729 1 90 9.13E-32 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ALIDE2_RS08110 5477e3f27375f3f2d33cb636c4d80c5e 90 SMART SM00411 1 90 7.1E-39 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS08110 5477e3f27375f3f2d33cb636c4d80c5e 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.8E-18 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS08110 5477e3f27375f3f2d33cb636c4d80c5e 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.8E-18 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS08110 5477e3f27375f3f2d33cb636c4d80c5e 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.8E-18 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS08110 5477e3f27375f3f2d33cb636c4d80c5e 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 19-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 ALIDE2_RS08110 5477e3f27375f3f2d33cb636c4d80c5e 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.5E-33 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS08110 5477e3f27375f3f2d33cb636c4d80c5e 90 PANTHER PTHR33175 1 90 5.6E-41 T 19-04-2016 ALIDE2_RS21110 e29d634ddbefb669a71d46da3942c46b 248 Pfam PF01925 Sulfite exporter TauE/SafE 11 240 8.4E-32 T 19-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 ALIDE2_RS21110 e29d634ddbefb669a71d46da3942c46b 248 PANTHER PTHR30269 2 244 6.2E-21 T 19-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 ALIDE2_RS20865 22bf23f9c48da03fd10cd44012186f23 99 Pfam PF05400 Flagellar protein FliT 19 89 3.3E-18 T 19-04-2016 IPR008622 Flagellar protein FliT ALIDE2_RS20865 22bf23f9c48da03fd10cd44012186f23 99 Gene3D G3DSA:1.20.58.380 4 91 3.6E-31 T 19-04-2016 ALIDE2_RS13555 4cbccd155fee7d81bf52f03d79e56c1f 299 Gene3D G3DSA:3.40.50.2020 4 158 3.5E-29 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS13555 4cbccd155fee7d81bf52f03d79e56c1f 299 Gene3D G3DSA:3.40.50.2020 159 278 9.2E-15 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS13555 4cbccd155fee7d81bf52f03d79e56c1f 299 SMART SM01400 3 118 7.2E-30 T 19-04-2016 ALIDE2_RS13555 4cbccd155fee7d81bf52f03d79e56c1f 299 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 6 290 5.1E-51 T 19-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 ALIDE2_RS13555 4cbccd155fee7d81bf52f03d79e56c1f 299 SUPERFAMILY SSF53271 5 156 8.75E-34 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS13555 4cbccd155fee7d81bf52f03d79e56c1f 299 Pfam PF00156 Phosphoribosyl transferase domain 159 272 1.5E-13 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 ALIDE2_RS13555 4cbccd155fee7d81bf52f03d79e56c1f 299 PANTHER PTHR10210 4 278 2.2E-40 T 19-04-2016 ALIDE2_RS13555 4cbccd155fee7d81bf52f03d79e56c1f 299 SUPERFAMILY SSF53271 159 287 1.23E-21 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS13555 4cbccd155fee7d81bf52f03d79e56c1f 299 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 116 4.0E-17 T 19-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 ALIDE2_RS13555 4cbccd155fee7d81bf52f03d79e56c1f 299 PANTHER PTHR10210:SF32 4 278 2.2E-40 T 19-04-2016 ALIDE2_RS04150 89f2962c078d692ee85d437b306269ee 210 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 17 210 42.734 T 19-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 ALIDE2_RS04150 89f2962c078d692ee85d437b306269ee 210 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 171 183 - T 19-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 ALIDE2_RS04150 89f2962c078d692ee85d437b306269ee 210 SUPERFAMILY SSF54211 17 101 5.18E-34 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS04150 89f2962c078d692ee85d437b306269ee 210 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 76 89 - T 19-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 ALIDE2_RS04150 89f2962c078d692ee85d437b306269ee 210 SUPERFAMILY SSF54211 103 193 6.83E-34 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS04150 89f2962c078d692ee85d437b306269ee 210 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 46 189 4.2E-64 T 19-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 ALIDE2_RS04150 89f2962c078d692ee85d437b306269ee 210 PANTHER PTHR23133 16 210 2.0E-103 T 19-04-2016 ALIDE2_RS04150 89f2962c078d692ee85d437b306269ee 210 PANTHER PTHR23133:SF2 16 210 2.0E-103 T 19-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 ALIDE2_RS04150 89f2962c078d692ee85d437b306269ee 210 Gene3D G3DSA:3.30.230.40 17 104 3.0E-39 T 19-04-2016 ALIDE2_RS04150 89f2962c078d692ee85d437b306269ee 210 Gene3D G3DSA:3.30.230.40 105 210 1.4E-29 T 19-04-2016 ALIDE2_RS05805 9403ec15dbe17bd068d2932cf32969d5 376 Gene3D G3DSA:3.40.47.10 190 219 6.3E-17 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05805 9403ec15dbe17bd068d2932cf32969d5 376 Gene3D G3DSA:3.40.47.10 17 113 6.3E-17 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05805 9403ec15dbe17bd068d2932cf32969d5 376 SUPERFAMILY SSF53901 4 224 3.01E-27 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05805 9403ec15dbe17bd068d2932cf32969d5 376 PANTHER PTHR18919 2 376 4.1E-89 T 19-04-2016 ALIDE2_RS05805 9403ec15dbe17bd068d2932cf32969d5 376 PANTHER PTHR18919:SF108 2 376 4.1E-89 T 19-04-2016 ALIDE2_RS05805 9403ec15dbe17bd068d2932cf32969d5 376 SUPERFAMILY SSF53901 236 370 1.49E-18 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05805 9403ec15dbe17bd068d2932cf32969d5 376 Gene3D G3DSA:3.40.47.10 239 366 2.2E-11 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05805 9403ec15dbe17bd068d2932cf32969d5 376 Gene3D G3DSA:3.40.47.10 141 178 2.2E-11 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05805 9403ec15dbe17bd068d2932cf32969d5 376 PIRSF PIRSF000429 1 370 1.4E-33 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS08150 029973e4af4e293420c5781f3680e9f2 319 Pfam PF00682 HMGL-like 7 292 1.2E-34 T 19-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 ALIDE2_RS08150 029973e4af4e293420c5781f3680e9f2 319 PANTHER PTHR10277 1 310 6.9E-81 T 19-04-2016 ALIDE2_RS08150 029973e4af4e293420c5781f3680e9f2 319 SUPERFAMILY SSF51569 3 310 3.48E-61 T 19-04-2016 ALIDE2_RS08150 029973e4af4e293420c5781f3680e9f2 319 PANTHER PTHR10277:SF1 1 310 6.9E-81 T 19-04-2016 ALIDE2_RS08150 029973e4af4e293420c5781f3680e9f2 319 Gene3D G3DSA:3.20.20.70 6 301 3.0E-56 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS07420 3787b7e9b1c16fd53f36ad5d8dd4d276 260 PANTHER PTHR24322:SF602 153 185 7.0E-52 T 19-04-2016 ALIDE2_RS07420 3787b7e9b1c16fd53f36ad5d8dd4d276 260 PANTHER PTHR24322:SF602 12 137 7.0E-52 T 19-04-2016 ALIDE2_RS07420 3787b7e9b1c16fd53f36ad5d8dd4d276 260 SUPERFAMILY SSF51735 2 256 1.37E-62 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS07420 3787b7e9b1c16fd53f36ad5d8dd4d276 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 254 1.7E-38 T 19-04-2016 ALIDE2_RS07420 3787b7e9b1c16fd53f36ad5d8dd4d276 260 PANTHER PTHR24322 153 185 7.0E-52 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07420 3787b7e9b1c16fd53f36ad5d8dd4d276 260 PANTHER PTHR24322 12 137 7.0E-52 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07420 3787b7e9b1c16fd53f36ad5d8dd4d276 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 9.1E-25 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07420 3787b7e9b1c16fd53f36ad5d8dd4d276 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 9.1E-25 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07420 3787b7e9b1c16fd53f36ad5d8dd4d276 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 9.1E-25 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07420 3787b7e9b1c16fd53f36ad5d8dd4d276 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 9.1E-25 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07420 3787b7e9b1c16fd53f36ad5d8dd4d276 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 9.1E-25 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS07420 3787b7e9b1c16fd53f36ad5d8dd4d276 260 Gene3D G3DSA:3.40.50.720 1 255 3.9E-63 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS07185 4101842a4b6a42b0e60c8c1bf0f5796d 566 PANTHER PTHR30607 1 564 2.9E-273 T 19-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ALIDE2_RS07185 4101842a4b6a42b0e60c8c1bf0f5796d 566 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 6 559 4.6E-163 T 19-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ALIDE2_RS07185 4101842a4b6a42b0e60c8c1bf0f5796d 566 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 560 27.893 T 19-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ALIDE2_RS07185 4101842a4b6a42b0e60c8c1bf0f5796d 566 PIRSF PIRSF001294 1 562 1.1E-218 T 19-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ALIDE2_RS07185 4101842a4b6a42b0e60c8c1bf0f5796d 566 Pfam PF03814 Potassium-transporting ATPase A subunit 6 558 1.6E-212 T 19-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ALIDE2_RS06320 1b97cbcef8ad94f3a25baf77e1e840a2 211 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 196 7.8E-26 T 19-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS06320 1b97cbcef8ad94f3a25baf77e1e840a2 211 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 55 86 - T 19-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS06320 1b97cbcef8ad94f3a25baf77e1e840a2 211 Gene3D G3DSA:1.10.10.10 138 201 1.3E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06320 1b97cbcef8ad94f3a25baf77e1e840a2 211 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 12 203 2.4E-72 T 19-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS06320 1b97cbcef8ad94f3a25baf77e1e840a2 211 Gene3D G3DSA:1.10.1740.10 10 119 1.5E-32 T 19-04-2016 ALIDE2_RS06320 1b97cbcef8ad94f3a25baf77e1e840a2 211 SUPERFAMILY SSF88659 137 197 1.07E-15 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS06320 1b97cbcef8ad94f3a25baf77e1e840a2 211 Pfam PF08281 Sigma-70, region 4 144 194 7.1E-17 T 19-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS06320 1b97cbcef8ad94f3a25baf77e1e840a2 211 PANTHER PTHR30173 4 200 1.4E-47 T 19-04-2016 ALIDE2_RS06320 1b97cbcef8ad94f3a25baf77e1e840a2 211 Pfam PF04542 Sigma-70 region 2 34 95 1.9E-14 T 19-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS06320 1b97cbcef8ad94f3a25baf77e1e840a2 211 SUPERFAMILY SSF88946 9 106 2.16E-27 T 19-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS03395 ec75ba866a6b1d5f73813741c7a3d098 262 SUPERFAMILY SSF56524 59 261 1.83E-65 T 19-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 ALIDE2_RS03395 ec75ba866a6b1d5f73813741c7a3d098 262 Gene3D G3DSA:3.90.420.10 104 260 5.8E-54 T 19-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 ALIDE2_RS03395 ec75ba866a6b1d5f73813741c7a3d098 262 PANTHER PTHR19372:SF9 6 260 3.3E-93 T 19-04-2016 ALIDE2_RS03395 ec75ba866a6b1d5f73813741c7a3d098 262 PANTHER PTHR19372 6 260 3.3E-93 T 19-04-2016 ALIDE2_RS03395 ec75ba866a6b1d5f73813741c7a3d098 262 Pfam PF00174 Oxidoreductase molybdopterin binding domain 106 251 8.8E-33 T 19-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 ALIDE2_RS19280 511e0dfda37648ae092ca31fcf3fbca4 210 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 8 210 37.823 T 19-04-2016 IPR003774 Protein of unknown function UPF0301 ALIDE2_RS19280 511e0dfda37648ae092ca31fcf3fbca4 210 SUPERFAMILY SSF143456 8 210 1.57E-60 T 19-04-2016 ALIDE2_RS19280 511e0dfda37648ae092ca31fcf3fbca4 210 PANTHER PTHR30327:SF1 1 106 3.5E-56 T 19-04-2016 ALIDE2_RS19280 511e0dfda37648ae092ca31fcf3fbca4 210 PANTHER PTHR30327:SF1 126 210 3.5E-56 T 19-04-2016 ALIDE2_RS19280 511e0dfda37648ae092ca31fcf3fbca4 210 Pfam PF02622 Uncharacterized ACR, COG1678 19 197 2.1E-49 T 19-04-2016 IPR003774 Protein of unknown function UPF0301 ALIDE2_RS19280 511e0dfda37648ae092ca31fcf3fbca4 210 Gene3D G3DSA:3.30.70.1300 48 153 5.6E-32 T 19-04-2016 ALIDE2_RS19280 511e0dfda37648ae092ca31fcf3fbca4 210 Gene3D G3DSA:3.40.1740.10 154 200 5.2E-35 T 19-04-2016 ALIDE2_RS19280 511e0dfda37648ae092ca31fcf3fbca4 210 Gene3D G3DSA:3.40.1740.10 7 47 5.2E-35 T 19-04-2016 ALIDE2_RS19280 511e0dfda37648ae092ca31fcf3fbca4 210 PANTHER PTHR30327 1 106 3.5E-56 T 19-04-2016 ALIDE2_RS19280 511e0dfda37648ae092ca31fcf3fbca4 210 PANTHER PTHR30327 126 210 3.5E-56 T 19-04-2016 ALIDE2_RS00715 abc7395f4289cd274a98e4d957c94dc8 307 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS00715 abc7395f4289cd274a98e4d957c94dc8 307 SUPERFAMILY SSF51735 7 260 2.6E-63 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00715 abc7395f4289cd274a98e4d957c94dc8 307 PANTHER PTHR13078 55 298 1.5E-114 T 19-04-2016 ALIDE2_RS00715 abc7395f4289cd274a98e4d957c94dc8 307 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 207 1.6E-6 T 19-04-2016 ALIDE2_RS00715 abc7395f4289cd274a98e4d957c94dc8 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 5.3E-24 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00715 abc7395f4289cd274a98e4d957c94dc8 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 5.3E-24 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00715 abc7395f4289cd274a98e4d957c94dc8 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 5.3E-24 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00715 abc7395f4289cd274a98e4d957c94dc8 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 5.3E-24 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00715 abc7395f4289cd274a98e4d957c94dc8 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 5.3E-24 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00715 abc7395f4289cd274a98e4d957c94dc8 307 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 252 3.8E-42 T 19-04-2016 ALIDE2_RS00715 abc7395f4289cd274a98e4d957c94dc8 307 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 1.7E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00715 abc7395f4289cd274a98e4d957c94dc8 307 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 1.7E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00715 abc7395f4289cd274a98e4d957c94dc8 307 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 1.7E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS00715 abc7395f4289cd274a98e4d957c94dc8 307 PANTHER PTHR13078:SF55 55 298 1.5E-114 T 19-04-2016 ALIDE2_RS00715 abc7395f4289cd274a98e4d957c94dc8 307 Gene3D G3DSA:3.40.50.720 5 266 5.3E-67 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS00730 288e6d8ae55427f8dc327c3cf81db37c 418 PANTHER PTHR23512:SF1 39 410 3.6E-30 T 19-04-2016 ALIDE2_RS00730 288e6d8ae55427f8dc327c3cf81db37c 418 Gene3D G3DSA:1.20.1250.20 22 202 1.0E-24 T 19-04-2016 ALIDE2_RS00730 288e6d8ae55427f8dc327c3cf81db37c 418 SUPERFAMILY SSF103473 19 410 5.36E-52 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS00730 288e6d8ae55427f8dc327c3cf81db37c 418 PANTHER PTHR23512 39 410 3.6E-30 T 19-04-2016 ALIDE2_RS00730 288e6d8ae55427f8dc327c3cf81db37c 418 Gene3D G3DSA:1.20.1250.20 231 411 8.9E-6 T 19-04-2016 ALIDE2_RS00730 288e6d8ae55427f8dc327c3cf81db37c 418 Pfam PF07690 Major Facilitator Superfamily 28 369 2.0E-33 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS16535 214f54106f625efaf0446e1e411cb46a 633 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 6 620 1.3E-200 T 19-04-2016 IPR022458 Conjugative coupling factor TraG/TraD ALIDE2_RS16535 214f54106f625efaf0446e1e411cb46a 633 Pfam PF12696 TraM recognition site of TraD and TraG 474 599 5.6E-12 T 19-04-2016 IPR032689 TraD/TraG, TraM recognition site ALIDE2_RS16535 214f54106f625efaf0446e1e411cb46a 633 Gene3D G3DSA:3.40.50.300 143 239 8.7E-33 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16535 214f54106f625efaf0446e1e411cb46a 633 Gene3D G3DSA:3.40.50.300 422 623 8.7E-33 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16535 214f54106f625efaf0446e1e411cb46a 633 SUPERFAMILY SSF52540 99 315 9.56E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16535 214f54106f625efaf0446e1e411cb46a 633 SUPERFAMILY SSF52540 376 621 9.56E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04045 abfb11ce9efda727dbf7e5ca692ee4f3 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 108 1.2E-28 T 19-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 ALIDE2_RS04045 abfb11ce9efda727dbf7e5ca692ee4f3 217 PANTHER PTHR30614:SF11 1 217 1.4E-91 T 19-04-2016 ALIDE2_RS04045 abfb11ce9efda727dbf7e5ca692ee4f3 217 Gene3D G3DSA:1.10.3720.10 10 213 1.0E-50 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS04045 abfb11ce9efda727dbf7e5ca692ee4f3 217 SUPERFAMILY SSF161098 11 206 6.02E-45 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS04045 abfb11ce9efda727dbf7e5ca692ee4f3 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 212 6.3E-26 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS04045 abfb11ce9efda727dbf7e5ca692ee4f3 217 PANTHER PTHR30614 1 217 1.4E-91 T 19-04-2016 ALIDE2_RS03515 cd26b3971fca38d4e404dce3e3d6b476 345 Pfam PF13480 Acetyltransferase (GNAT) domain 167 310 5.2E-27 T 19-04-2016 ALIDE2_RS03515 cd26b3971fca38d4e404dce3e3d6b476 345 SUPERFAMILY SSF55729 152 320 5.83E-17 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS08645 3fa2170aeffe9ded0574e14b39582d98 512 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 29 486 1.5E-87 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 ALIDE2_RS08645 3fa2170aeffe9ded0574e14b39582d98 512 PANTHER PTHR30203:SF3 7 504 2.7E-100 T 19-04-2016 ALIDE2_RS08645 3fa2170aeffe9ded0574e14b39582d98 512 Gene3D G3DSA:1.20.1600.10 70 488 7.3E-101 T 19-04-2016 ALIDE2_RS08645 3fa2170aeffe9ded0574e14b39582d98 512 Pfam PF02321 Outer membrane efflux protein 81 267 2.8E-17 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS08645 3fa2170aeffe9ded0574e14b39582d98 512 Pfam PF02321 Outer membrane efflux protein 304 484 3.2E-25 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS08645 3fa2170aeffe9ded0574e14b39582d98 512 PANTHER PTHR30203 7 504 2.7E-100 T 19-04-2016 ALIDE2_RS08645 3fa2170aeffe9ded0574e14b39582d98 512 SUPERFAMILY SSF56954 23 488 8.76E-97 T 19-04-2016 ALIDE2_RS05395 4d6b0eb761e6e03c16dcd8b2491197d3 431 PANTHER PTHR30629 30 408 7.0E-72 T 19-04-2016 ALIDE2_RS05395 4d6b0eb761e6e03c16dcd8b2491197d3 431 Gene3D G3DSA:1.10.443.10 244 399 2.9E-20 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS05395 4d6b0eb761e6e03c16dcd8b2491197d3 431 PANTHER PTHR30629:SF2 30 408 7.0E-72 T 19-04-2016 ALIDE2_RS05395 4d6b0eb761e6e03c16dcd8b2491197d3 431 Gene3D G3DSA:1.10.150.130 106 199 1.2E-12 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS05395 4d6b0eb761e6e03c16dcd8b2491197d3 431 Pfam PF13356 Domain of unknown function (DUF4102) 14 93 1.8E-17 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 ALIDE2_RS05395 4d6b0eb761e6e03c16dcd8b2491197d3 431 Pfam PF00589 Phage integrase family 245 389 1.3E-15 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS05395 4d6b0eb761e6e03c16dcd8b2491197d3 431 SUPERFAMILY SSF56349 106 403 1.03E-52 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS06420 bf62ebb505f4378f9da78bc6c74851ad 515 PANTHER PTHR22594 12 515 4.8E-253 T 19-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS06420 bf62ebb505f4378f9da78bc6c74851ad 515 SUPERFAMILY SSF55681 170 512 7.47E-112 T 19-04-2016 ALIDE2_RS06420 bf62ebb505f4378f9da78bc6c74851ad 515 PRINTS PR00982 Lysyl-tRNA synthetase signature 207 217 5.5E-39 T 19-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 ALIDE2_RS06420 bf62ebb505f4378f9da78bc6c74851ad 515 PRINTS PR00982 Lysyl-tRNA synthetase signature 252 265 5.5E-39 T 19-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 ALIDE2_RS06420 bf62ebb505f4378f9da78bc6c74851ad 515 PRINTS PR00982 Lysyl-tRNA synthetase signature 396 412 5.5E-39 T 19-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 ALIDE2_RS06420 bf62ebb505f4378f9da78bc6c74851ad 515 PRINTS PR00982 Lysyl-tRNA synthetase signature 223 239 5.5E-39 T 19-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 ALIDE2_RS06420 bf62ebb505f4378f9da78bc6c74851ad 515 PRINTS PR00982 Lysyl-tRNA synthetase signature 270 287 5.5E-39 T 19-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 ALIDE2_RS06420 bf62ebb505f4378f9da78bc6c74851ad 515 Gene3D G3DSA:2.40.50.140 15 162 2.8E-45 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS06420 bf62ebb505f4378f9da78bc6c74851ad 515 PANTHER PTHR22594:SF4 12 515 4.8E-253 T 19-04-2016 ALIDE2_RS06420 bf62ebb505f4378f9da78bc6c74851ad 515 Pfam PF00152 tRNA synthetases class II (D, K and N) 170 511 1.1E-80 T 19-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 ALIDE2_RS06420 bf62ebb505f4378f9da78bc6c74851ad 515 Pfam PF01336 OB-fold nucleic acid binding domain 72 154 1.2E-14 T 19-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ALIDE2_RS06420 bf62ebb505f4378f9da78bc6c74851ad 515 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 513 5.2E-195 T 19-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 ALIDE2_RS06420 bf62ebb505f4378f9da78bc6c74851ad 515 Gene3D G3DSA:3.30.930.10 165 510 1.2E-111 T 19-04-2016 ALIDE2_RS06420 bf62ebb505f4378f9da78bc6c74851ad 515 SUPERFAMILY SSF50249 12 163 1.44E-38 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS06420 bf62ebb505f4378f9da78bc6c74851ad 515 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 514 43.27 T 19-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 ALIDE2_RS24085 534573b599945ef15ed319fac802eefb 97 Pfam PF03592 Terminase small subunit 1 72 2.0E-15 T 19-04-2016 IPR005335 Terminase small subunit GO:0006323 ALIDE2_RS03625 fe9e2509f4419d4c4d1e4d54a948d226 427 Gene3D G3DSA:2.130.10.10 97 422 9.0E-13 T 19-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ALIDE2_RS03625 fe9e2509f4419d4c4d1e4d54a948d226 427 SUPERFAMILY SSF82171 97 424 1.57E-12 T 19-04-2016 ALIDE2_RS13610 c3edb7acebd6603e3e9315b4ca837316 549 SUPERFAMILY SSF56059 79 176 4.5E-5 T 19-04-2016 ALIDE2_RS13610 c3edb7acebd6603e3e9315b4ca837316 549 SUPERFAMILY SSF56059 281 412 4.5E-5 T 19-04-2016 ALIDE2_RS10310 1b24f86b42eba68b7bcaaaefafea9e06 428 PANTHER PTHR11076:SF40 1 409 3.0E-178 T 19-04-2016 ALIDE2_RS10310 1b24f86b42eba68b7bcaaaefafea9e06 428 Pfam PF11799 impB/mucB/samB family C-terminal domain 246 358 2.2E-9 T 19-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS10310 1b24f86b42eba68b7bcaaaefafea9e06 428 Gene3D G3DSA:1.10.150.20 173 244 3.9E-14 T 19-04-2016 ALIDE2_RS10310 1b24f86b42eba68b7bcaaaefafea9e06 428 Gene3D G3DSA:3.30.70.270 65 150 1.6E-19 T 19-04-2016 ALIDE2_RS10310 1b24f86b42eba68b7bcaaaefafea9e06 428 SUPERFAMILY SSF56672 1 242 4.18E-63 T 19-04-2016 ALIDE2_RS10310 1b24f86b42eba68b7bcaaaefafea9e06 428 PANTHER PTHR11076 1 409 3.0E-178 T 19-04-2016 ALIDE2_RS10310 1b24f86b42eba68b7bcaaaefafea9e06 428 Pfam PF13438 Domain of unknown function (DUF4113) 375 426 1.6E-18 T 19-04-2016 IPR025188 Domain of unknown function DUF4113 ALIDE2_RS10310 1b24f86b42eba68b7bcaaaefafea9e06 428 Pfam PF00817 impB/mucB/samB family 5 144 3.0E-33 T 19-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ALIDE2_RS06540 9c9f04523d7ea56e618b4a805f19a9bb 382 PANTHER PTHR11712 32 360 9.5E-56 T 19-04-2016 ALIDE2_RS06540 9c9f04523d7ea56e618b4a805f19a9bb 382 SUPERFAMILY SSF48264 13 366 2.1E-70 T 19-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 ALIDE2_RS06540 9c9f04523d7ea56e618b4a805f19a9bb 382 PRINTS PR00359 B-class P450 signature 119 135 5.4E-24 T 19-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ALIDE2_RS06540 9c9f04523d7ea56e618b4a805f19a9bb 382 PRINTS PR00359 B-class P450 signature 302 317 5.4E-24 T 19-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ALIDE2_RS06540 9c9f04523d7ea56e618b4a805f19a9bb 382 PRINTS PR00359 B-class P450 signature 323 332 5.4E-24 T 19-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ALIDE2_RS06540 9c9f04523d7ea56e618b4a805f19a9bb 382 PRINTS PR00359 B-class P450 signature 72 83 5.4E-24 T 19-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ALIDE2_RS06540 9c9f04523d7ea56e618b4a805f19a9bb 382 PRINTS PR00359 B-class P450 signature 257 268 5.4E-24 T 19-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ALIDE2_RS06540 9c9f04523d7ea56e618b4a805f19a9bb 382 PRINTS PR00359 B-class P450 signature 274 301 5.4E-24 T 19-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ALIDE2_RS06540 9c9f04523d7ea56e618b4a805f19a9bb 382 PRINTS PR00359 B-class P450 signature 332 343 5.4E-24 T 19-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ALIDE2_RS06540 9c9f04523d7ea56e618b4a805f19a9bb 382 Pfam PF00067 Cytochrome P450 173 351 5.6E-16 T 19-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 ALIDE2_RS06540 9c9f04523d7ea56e618b4a805f19a9bb 382 Gene3D G3DSA:1.10.630.10 3 380 2.4E-84 T 19-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 ALIDE2_RS22905 ce52a0c9bea11dc67c8b29dbe0440408 274 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 90 103 - T 19-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS22905 ce52a0c9bea11dc67c8b29dbe0440408 274 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 250 3.2E-32 T 19-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS22905 ce52a0c9bea11dc67c8b29dbe0440408 274 SMART SM00934 17 258 2.0E-45 T 19-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS22905 ce52a0c9bea11dc67c8b29dbe0440408 274 SUPERFAMILY SSF51366 3 264 3.93E-73 T 19-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 ALIDE2_RS22905 ce52a0c9bea11dc67c8b29dbe0440408 274 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 2 271 36.747 T 19-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS22905 ce52a0c9bea11dc67c8b29dbe0440408 274 PANTHER PTHR19278:SF1 1 229 1.0E-60 T 19-04-2016 ALIDE2_RS22905 ce52a0c9bea11dc67c8b29dbe0440408 274 PANTHER PTHR19278 1 229 1.0E-60 T 19-04-2016 ALIDE2_RS22905 ce52a0c9bea11dc67c8b29dbe0440408 274 Gene3D G3DSA:3.20.20.70 6 268 1.2E-68 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS22905 ce52a0c9bea11dc67c8b29dbe0440408 274 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 3 258 2.1E-75 T 19-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 ALIDE2_RS16965 b4245a4d3022f63535cdfa208fa215a4 774 Pfam PF02538 Hydantoinase B/oxoprolinase 50 629 3.5E-119 T 19-04-2016 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 ALIDE2_RS01695 8e9acc35606c608c114706e4442a0c25 391 SUPERFAMILY SSF144083 320 383 3.14E-20 T 19-04-2016 ALIDE2_RS01695 8e9acc35606c608c114706e4442a0c25 391 SUPERFAMILY SSF143865 181 319 5.36E-14 T 19-04-2016 ALIDE2_RS01695 8e9acc35606c608c114706e4442a0c25 391 SUPERFAMILY SSF143865 22 154 5.36E-14 T 19-04-2016 ALIDE2_RS01695 8e9acc35606c608c114706e4442a0c25 391 PANTHER PTHR21535 189 385 2.0E-26 T 19-04-2016 ALIDE2_RS01695 8e9acc35606c608c114706e4442a0c25 391 Gene3D G3DSA:1.20.58.340 184 304 4.9E-4 T 19-04-2016 ALIDE2_RS01695 8e9acc35606c608c114706e4442a0c25 391 Pfam PF01544 CorA-like Mg2+ transporter protein 33 381 6.5E-40 T 19-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 ALIDE2_RS01695 8e9acc35606c608c114706e4442a0c25 391 Gene3D G3DSA:1.20.58.340 309 385 7.4E-28 T 19-04-2016 ALIDE2_RS10305 a6edcef7a8456b580428c2c2ffc7fd56 161 PANTHER PTHR33516:SF1 20 159 6.7E-44 T 19-04-2016 ALIDE2_RS10305 a6edcef7a8456b580428c2c2ffc7fd56 161 Pfam PF00717 Peptidase S24-like 70 125 1.3E-10 T 19-04-2016 IPR019759 Peptidase S24/S26A/S26B ALIDE2_RS10305 a6edcef7a8456b580428c2c2ffc7fd56 161 SUPERFAMILY SSF51306 27 146 4.06E-27 T 19-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C ALIDE2_RS10305 a6edcef7a8456b580428c2c2ffc7fd56 161 Gene3D G3DSA:2.10.109.10 38 153 1.1E-34 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS10305 a6edcef7a8456b580428c2c2ffc7fd56 161 PANTHER PTHR33516 20 159 6.7E-44 T 19-04-2016 ALIDE2_RS04900 6035fed6fa9d341419f7b3b7c7691043 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 2.4E-6 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS04900 6035fed6fa9d341419f7b3b7c7691043 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 2.4E-6 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS04900 6035fed6fa9d341419f7b3b7c7691043 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 70 81 2.4E-6 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS04900 6035fed6fa9d341419f7b3b7c7691043 234 PANTHER PTHR24322 12 173 5.4E-33 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS04900 6035fed6fa9d341419f7b3b7c7691043 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 1.2E-35 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS04900 6035fed6fa9d341419f7b3b7c7691043 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.2E-35 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS04900 6035fed6fa9d341419f7b3b7c7691043 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 1.2E-35 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS04900 6035fed6fa9d341419f7b3b7c7691043 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 1.2E-35 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS04900 6035fed6fa9d341419f7b3b7c7691043 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 1.2E-35 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS04900 6035fed6fa9d341419f7b3b7c7691043 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 1.2E-35 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS04900 6035fed6fa9d341419f7b3b7c7691043 234 SUPERFAMILY SSF51735 8 233 6.76E-56 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04900 6035fed6fa9d341419f7b3b7c7691043 234 Gene3D G3DSA:3.40.50.720 8 232 7.7E-59 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04900 6035fed6fa9d341419f7b3b7c7691043 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 230 5.1E-38 T 19-04-2016 ALIDE2_RS19645 176af07d43a8a1110abb95f4b12417fe 187 PANTHER PTHR12151 30 187 3.6E-56 T 19-04-2016 IPR003782 Copper chaperone SCO1/SenC ALIDE2_RS19645 176af07d43a8a1110abb95f4b12417fe 187 Gene3D G3DSA:3.40.30.10 9 185 8.1E-56 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS19645 176af07d43a8a1110abb95f4b12417fe 187 SUPERFAMILY SSF52833 27 185 8.31E-50 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS19645 176af07d43a8a1110abb95f4b12417fe 187 Pfam PF02630 SCO1/SenC 28 162 5.5E-36 T 19-04-2016 IPR003782 Copper chaperone SCO1/SenC ALIDE2_RS06240 a28ca8b3949d42a6bdb0a3cdc5d00f22 1028 Pfam PF10150 Ribonuclease E/G family 120 389 7.1E-95 T 19-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 ALIDE2_RS06240 a28ca8b3949d42a6bdb0a3cdc5d00f22 1028 PANTHER PTHR30001 1 544 2.6E-302 T 19-04-2016 ALIDE2_RS06240 a28ca8b3949d42a6bdb0a3cdc5d00f22 1028 PANTHER PTHR30001 560 860 2.6E-302 T 19-04-2016 ALIDE2_RS06240 a28ca8b3949d42a6bdb0a3cdc5d00f22 1028 Pfam PF00575 S1 RNA binding domain 36 117 4.8E-13 T 19-04-2016 IPR003029 S1 domain GO:0003676 ALIDE2_RS06240 a28ca8b3949d42a6bdb0a3cdc5d00f22 1028 PANTHER PTHR30001:SF1 1 544 2.6E-302 T 19-04-2016 ALIDE2_RS06240 a28ca8b3949d42a6bdb0a3cdc5d00f22 1028 PANTHER PTHR30001:SF1 560 860 2.6E-302 T 19-04-2016 ALIDE2_RS06240 a28ca8b3949d42a6bdb0a3cdc5d00f22 1028 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 422 1.2E-157 T 19-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 ALIDE2_RS06240 a28ca8b3949d42a6bdb0a3cdc5d00f22 1028 SUPERFAMILY SSF50249 39 124 1.51E-18 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS06240 a28ca8b3949d42a6bdb0a3cdc5d00f22 1028 Gene3D G3DSA:2.40.50.140 32 124 2.1E-34 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS06240 a28ca8b3949d42a6bdb0a3cdc5d00f22 1028 Hamap MF_00970 Ribonuclease E [rne]. 1 999 32.848 T 19-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 ALIDE2_RS06240 a28ca8b3949d42a6bdb0a3cdc5d00f22 1028 SMART SM00316 37 118 8.8E-12 T 19-04-2016 IPR022967 RNA-binding domain, S1 ALIDE2_RS14380 e70d15834e9d6660a619f07d402fb9ea 364 Gene3D G3DSA:3.50.50.60 135 221 2.1E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS14380 e70d15834e9d6660a619f07d402fb9ea 364 Gene3D G3DSA:3.50.50.60 22 60 2.1E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS14380 e70d15834e9d6660a619f07d402fb9ea 364 Gene3D G3DSA:3.50.50.60 327 361 2.1E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS14380 e70d15834e9d6660a619f07d402fb9ea 364 PANTHER PTHR16128 17 360 3.3E-55 T 19-04-2016 ALIDE2_RS14380 e70d15834e9d6660a619f07d402fb9ea 364 Gene3D G3DSA:3.90.660.10 68 131 1.3E-43 T 19-04-2016 ALIDE2_RS14380 e70d15834e9d6660a619f07d402fb9ea 364 Gene3D G3DSA:3.90.660.10 222 326 1.3E-43 T 19-04-2016 ALIDE2_RS14380 e70d15834e9d6660a619f07d402fb9ea 364 Pfam PF13450 NAD(P)-binding Rossmann-like domain 26 84 3.1E-14 T 19-04-2016 ALIDE2_RS14380 e70d15834e9d6660a619f07d402fb9ea 364 PRINTS PR00419 Adrenodoxin reductase family signature 46 59 2.6E-7 T 19-04-2016 ALIDE2_RS14380 e70d15834e9d6660a619f07d402fb9ea 364 PRINTS PR00419 Adrenodoxin reductase family signature 23 45 2.6E-7 T 19-04-2016 ALIDE2_RS14380 e70d15834e9d6660a619f07d402fb9ea 364 SUPERFAMILY SSF51905 23 231 2.81E-33 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS14380 e70d15834e9d6660a619f07d402fb9ea 364 SUPERFAMILY SSF51905 318 361 2.81E-33 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS14380 e70d15834e9d6660a619f07d402fb9ea 364 Pfam PF01593 Flavin containing amine oxidoreductase 120 319 1.6E-5 T 19-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 ALIDE2_RS12705 821056fbf864545e16d0fa4a1ec4ac8e 372 Pfam PF04055 Radical SAM superfamily 79 254 2.0E-10 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ALIDE2_RS12705 821056fbf864545e16d0fa4a1ec4ac8e 372 PANTHER PTHR11228 22 329 1.9E-81 T 19-04-2016 ALIDE2_RS12705 821056fbf864545e16d0fa4a1ec4ac8e 372 Gene3D G3DSA:3.20.20.70 82 262 1.6E-5 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS12705 821056fbf864545e16d0fa4a1ec4ac8e 372 PANTHER PTHR11228:SF26 22 329 1.9E-81 T 19-04-2016 ALIDE2_RS12705 821056fbf864545e16d0fa4a1ec4ac8e 372 SUPERFAMILY SSF102114 77 274 7.32E-8 T 19-04-2016 ALIDE2_RS15620 f2ff797af5a2db06e8fb64fc6a51a9c5 210 PANTHER PTHR19136 1 205 1.0E-34 T 19-04-2016 ALIDE2_RS15620 f2ff797af5a2db06e8fb64fc6a51a9c5 210 SUPERFAMILY SSF53448 6 201 2.1E-29 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS15620 f2ff797af5a2db06e8fb64fc6a51a9c5 210 Gene3D G3DSA:3.90.550.10 4 205 4.4E-50 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS15620 f2ff797af5a2db06e8fb64fc6a51a9c5 210 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 201 2.7E-64 T 19-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 ALIDE2_RS15620 f2ff797af5a2db06e8fb64fc6a51a9c5 210 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 204 26.757 T 19-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 ALIDE2_RS15620 f2ff797af5a2db06e8fb64fc6a51a9c5 210 Pfam PF12804 MobA-like NTP transferase domain 9 170 6.5E-34 T 19-04-2016 IPR025877 MobA-like NTP transferase ALIDE2_RS15620 f2ff797af5a2db06e8fb64fc6a51a9c5 210 PANTHER PTHR19136:SF81 1 205 1.0E-34 T 19-04-2016 ALIDE2_RS01345 85e4f9d75cd1ca090d739d3292804273 89 ProDom PD004249 MONOOXYGENASE COMPONENT HYDROXYLASE MMOB/DMPM PHENOL SUBUNIT 3D-STRUCTURE HYDROCARBONS IRON PHENOLHYDROXYLASE 8 83 6.0E-25 T 19-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 ALIDE2_RS01345 85e4f9d75cd1ca090d739d3292804273 89 Gene3D G3DSA:3.90.56.10 2 88 5.4E-35 T 19-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 ALIDE2_RS01345 85e4f9d75cd1ca090d739d3292804273 89 SUPERFAMILY SSF56029 3 88 1.27E-31 T 19-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 ALIDE2_RS01345 85e4f9d75cd1ca090d739d3292804273 89 Pfam PF02406 MmoB/DmpM family 3 85 1.4E-31 T 19-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 ALIDE2_RS10405 2fbe5de6df76bdfa66ab0c06d0ed17cd 141 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 10 121 2.9E-20 T 19-04-2016 IPR003736 Phenylacetic acid degradation-related domain ALIDE2_RS10405 2fbe5de6df76bdfa66ab0c06d0ed17cd 141 Pfam PF03061 Thioesterase superfamily 40 114 5.3E-14 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS10405 2fbe5de6df76bdfa66ab0c06d0ed17cd 141 SUPERFAMILY SSF54637 6 126 1.74E-32 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS10405 2fbe5de6df76bdfa66ab0c06d0ed17cd 141 Gene3D G3DSA:3.10.129.10 6 126 4.4E-33 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS10405 2fbe5de6df76bdfa66ab0c06d0ed17cd 141 PANTHER PTHR12418 8 137 1.3E-23 T 19-04-2016 ALIDE2_RS04200 a5bde790a4b12b8b03deb9048582aedf 943 Gene3D G3DSA:3.20.20.370 540 787 6.7E-5 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ALIDE2_RS04200 a5bde790a4b12b8b03deb9048582aedf 943 Pfam PF03537 Glycoside-hydrolase family GH114 46 274 1.6E-24 T 19-04-2016 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain ALIDE2_RS04200 a5bde790a4b12b8b03deb9048582aedf 943 PANTHER PTHR35882 15 793 2.7E-33 T 19-04-2016 ALIDE2_RS04200 a5bde790a4b12b8b03deb9048582aedf 943 SUPERFAMILY SSF51445 34 288 4.0E-41 T 19-04-2016 IPR017853 Glycoside hydrolase superfamily ALIDE2_RS04200 a5bde790a4b12b8b03deb9048582aedf 943 PIRSF PIRSF029570 4 941 0.0 T 19-04-2016 IPR016925 Uncharacterised conserved protein UCP029570 ALIDE2_RS04200 a5bde790a4b12b8b03deb9048582aedf 943 SUPERFAMILY SSF88713 515 772 1.78E-7 T 19-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ALIDE2_RS21175 d2f6be6e7eec49e35891fab09e1d1446 316 PANTHER PTHR36838 1 307 3.5E-28 T 19-04-2016 ALIDE2_RS21175 d2f6be6e7eec49e35891fab09e1d1446 316 Pfam PF03547 Membrane transport protein 9 147 2.1E-17 T 19-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 ALIDE2_RS21175 d2f6be6e7eec49e35891fab09e1d1446 316 Pfam PF03547 Membrane transport protein 161 308 1.5E-10 T 19-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 ALIDE2_RS21175 d2f6be6e7eec49e35891fab09e1d1446 316 PANTHER PTHR36838:SF1 1 307 3.5E-28 T 19-04-2016 ALIDE2_RS21990 03af8636ed82202c473dd59e3507d3ca 211 SUPERFAMILY SSF110997 134 209 4.45E-20 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 ALIDE2_RS21990 03af8636ed82202c473dd59e3507d3ca 211 Gene3D G3DSA:3.30.70.1070 131 209 3.6E-26 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 ALIDE2_RS21990 03af8636ed82202c473dd59e3507d3ca 211 Pfam PF05036 Sporulation related domain 136 208 1.7E-17 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 ALIDE2_RS04185 3996ab876de991b36370c6a5d09d9442 464 Pfam PF16963 PelD GGDEF domain 338 458 4.3E-40 T 19-04-2016 IPR031583 PelD, GGDEF domain ALIDE2_RS04185 3996ab876de991b36370c6a5d09d9442 464 SUPERFAMILY SSF55781 208 331 1.24E-6 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 239 271 - T 19-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 SUPERFAMILY SSF53720 33 437 2.16E-85 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 11 437 40.863 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 Pfam PF00815 Histidinol dehydrogenase 29 437 2.5E-166 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 PANTHER PTHR21256 1 438 1.6E-195 T 19-04-2016 ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 Gene3D G3DSA:3.40.50.1980 33 249 2.4E-79 T 19-04-2016 ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 436 2.2E-157 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 PRINTS PR00083 Histidinol dehydrogenase signature 239 260 5.4E-83 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 PRINTS PR00083 Histidinol dehydrogenase signature 330 355 5.4E-83 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 5.4E-83 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 PRINTS PR00083 Histidinol dehydrogenase signature 180 206 5.4E-83 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 PRINTS PR00083 Histidinol dehydrogenase signature 261 280 5.4E-83 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 PRINTS PR00083 Histidinol dehydrogenase signature 210 235 5.4E-83 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 PRINTS PR00083 Histidinol dehydrogenase signature 146 172 5.4E-83 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 PRINTS PR00083 Histidinol dehydrogenase signature 371 389 5.4E-83 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS04130 197a7a000fa406e84f92f677266e16fd 438 PIRSF PIRSF000099 5 438 5.3E-155 T 19-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 ALIDE2_RS12685 81f778243b742454c8dd650a4f803c36 371 SMART SM00829 12 367 7.3E-4 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ALIDE2_RS12685 81f778243b742454c8dd650a4f803c36 371 PANTHER PTHR11695:SF560 128 371 1.9E-210 T 19-04-2016 ALIDE2_RS12685 81f778243b742454c8dd650a4f803c36 371 PANTHER PTHR11695:SF560 15 108 1.9E-210 T 19-04-2016 ALIDE2_RS12685 81f778243b742454c8dd650a4f803c36 371 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 19-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS12685 81f778243b742454c8dd650a4f803c36 371 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 1.7E-25 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ALIDE2_RS12685 81f778243b742454c8dd650a4f803c36 371 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 2.0E-217 T 19-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 ALIDE2_RS12685 81f778243b742454c8dd650a4f803c36 371 SUPERFAMILY SSF50129 318 369 8.47E-10 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS12685 81f778243b742454c8dd650a4f803c36 371 Gene3D G3DSA:3.90.180.10 2 190 5.7E-67 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS12685 81f778243b742454c8dd650a4f803c36 371 SUPERFAMILY SSF51735 161 334 2.88E-46 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12685 81f778243b742454c8dd650a4f803c36 371 Gene3D G3DSA:3.40.50.720 191 310 2.8E-41 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS12685 81f778243b742454c8dd650a4f803c36 371 PANTHER PTHR11695 128 371 1.9E-210 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS12685 81f778243b742454c8dd650a4f803c36 371 PANTHER PTHR11695 15 108 1.9E-210 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 ALIDE2_RS12685 81f778243b742454c8dd650a4f803c36 371 Pfam PF00107 Zinc-binding dehydrogenase 197 329 1.0E-24 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ALIDE2_RS12685 81f778243b742454c8dd650a4f803c36 371 SUPERFAMILY SSF50129 1 184 3.65E-70 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS21640 04e046b453cecf60d58fdc602862faa9 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.632 T 19-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21640 04e046b453cecf60d58fdc602862faa9 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 19-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21640 04e046b453cecf60d58fdc602862faa9 179 SUPERFAMILY SSF55282 3 179 9.65E-77 T 19-04-2016 IPR022803 Ribosomal protein L5 domain ALIDE2_RS21640 04e046b453cecf60d58fdc602862faa9 179 Gene3D G3DSA:3.30.1440.10 1 179 2.2E-77 T 19-04-2016 IPR022803 Ribosomal protein L5 domain ALIDE2_RS21640 04e046b453cecf60d58fdc602862faa9 179 PANTHER PTHR11994 1 178 3.3E-93 T 19-04-2016 ALIDE2_RS21640 04e046b453cecf60d58fdc602862faa9 179 PIRSF PIRSF002161 1 179 1.6E-63 T 19-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 ALIDE2_RS21640 04e046b453cecf60d58fdc602862faa9 179 Pfam PF00673 ribosomal L5P family C-terminus 85 177 8.5E-40 T 19-04-2016 IPR031309 Ribosomal protein L5, C-terminal ALIDE2_RS21640 04e046b453cecf60d58fdc602862faa9 179 Pfam PF00281 Ribosomal protein L5 24 80 1.5E-27 T 19-04-2016 IPR031310 Ribosomal protein L5, N-terminal ALIDE2_RS03055 c7d9a232b79fb1439b30de9d074c6eb8 403 PANTHER PTHR30012:SF0 3 403 3.2E-102 T 19-04-2016 ALIDE2_RS03055 c7d9a232b79fb1439b30de9d074c6eb8 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 5.0E-20 T 19-04-2016 IPR003004 GspF/PilC family ALIDE2_RS03055 c7d9a232b79fb1439b30de9d074c6eb8 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 5.0E-20 T 19-04-2016 IPR003004 GspF/PilC family ALIDE2_RS03055 c7d9a232b79fb1439b30de9d074c6eb8 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 5.0E-20 T 19-04-2016 IPR003004 GspF/PilC family ALIDE2_RS03055 c7d9a232b79fb1439b30de9d074c6eb8 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 5.0E-20 T 19-04-2016 IPR003004 GspF/PilC family ALIDE2_RS03055 c7d9a232b79fb1439b30de9d074c6eb8 403 PANTHER PTHR30012 3 403 3.2E-102 T 19-04-2016 ALIDE2_RS03055 c7d9a232b79fb1439b30de9d074c6eb8 403 Pfam PF00482 Type II secretion system (T2SS), protein F 274 393 5.2E-20 T 19-04-2016 IPR018076 Type II secretion system F domain ALIDE2_RS03055 c7d9a232b79fb1439b30de9d074c6eb8 403 Pfam PF00482 Type II secretion system (T2SS), protein F 70 193 2.0E-22 T 19-04-2016 IPR018076 Type II secretion system F domain ALIDE2_RS17735 09bbaab56161555ecdfb363a757041da 308 Gene3D G3DSA:1.20.1250.20 208 294 4.2E-4 T 19-04-2016 ALIDE2_RS17735 09bbaab56161555ecdfb363a757041da 308 Pfam PF07690 Major Facilitator Superfamily 28 296 5.6E-24 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS17735 09bbaab56161555ecdfb363a757041da 308 Gene3D G3DSA:1.20.1250.20 24 195 7.7E-25 T 19-04-2016 ALIDE2_RS17735 09bbaab56161555ecdfb363a757041da 308 PANTHER PTHR23502 22 296 1.4E-53 T 19-04-2016 ALIDE2_RS17735 09bbaab56161555ecdfb363a757041da 308 SUPERFAMILY SSF103473 22 294 9.55E-41 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS17735 09bbaab56161555ecdfb363a757041da 308 PANTHER PTHR23502:SF19 22 296 1.4E-53 T 19-04-2016 ALIDE2_RS00200 071aa30ab2c0563314c3983f6126a270 417 PANTHER PTHR35793 3 417 2.5E-180 T 19-04-2016 ALIDE2_RS00200 071aa30ab2c0563314c3983f6126a270 417 PIRSF PIRSF036542 2 417 1.5E-168 T 19-04-2016 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB ALIDE2_RS00200 071aa30ab2c0563314c3983f6126a270 417 Pfam PF07670 Nucleoside recognition 50 156 2.5E-6 T 19-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 ALIDE2_RS00200 071aa30ab2c0563314c3983f6126a270 417 PANTHER PTHR35793:SF2 3 417 2.5E-180 T 19-04-2016 ALIDE2_RS01465 50074e7a1ec8af0930e07d66114d7979 318 PIRSF PIRSF017082 2 316 2.3E-85 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01465 50074e7a1ec8af0930e07d66114d7979 318 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 43 312 1.1E-87 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01465 50074e7a1ec8af0930e07d66114d7979 318 PANTHER PTHR30349 12 283 2.6E-83 T 19-04-2016 ALIDE2_RS01465 50074e7a1ec8af0930e07d66114d7979 318 PANTHER PTHR30349:SF32 12 283 2.6E-83 T 19-04-2016 ALIDE2_RS01465 50074e7a1ec8af0930e07d66114d7979 318 SUPERFAMILY SSF53850 109 281 4.55E-15 T 19-04-2016 ALIDE2_RS01465 50074e7a1ec8af0930e07d66114d7979 318 Gene3D G3DSA:3.40.190.10 122 240 6.2E-7 T 19-04-2016 ALIDE2_RS21455 5b669c98fdfcf97f104d62c0bd943459 346 Gene3D G3DSA:3.50.50.60 167 215 2.8E-4 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS21455 5b669c98fdfcf97f104d62c0bd943459 346 Pfam PF13478 XdhC Rossmann domain 170 312 2.7E-37 T 19-04-2016 IPR027051 XdhC Rossmann domain ALIDE2_RS21455 5b669c98fdfcf97f104d62c0bd943459 346 Pfam PF02625 XdhC and CoxI family 15 69 8.2E-21 T 19-04-2016 IPR003777 XdhC- CoxI ALIDE2_RS21455 5b669c98fdfcf97f104d62c0bd943459 346 PANTHER PTHR30388:SF4 5 318 1.5E-79 T 19-04-2016 ALIDE2_RS21455 5b669c98fdfcf97f104d62c0bd943459 346 PANTHER PTHR30388 5 318 1.5E-79 T 19-04-2016 ALIDE2_RS16385 0cfa5a103b7b8c7291b8ca3f781b4d77 314 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 47 305 1.3E-32 T 19-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system ALIDE2_RS20495 982a052cd9487b2e4803abdaf449ed07 221 PANTHER PTHR30231:SF7 3 216 5.5E-71 T 19-04-2016 ALIDE2_RS20495 982a052cd9487b2e4803abdaf449ed07 221 SMART SM00479 41 220 5.3E-23 T 19-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ALIDE2_RS20495 982a052cd9487b2e4803abdaf449ed07 221 SUPERFAMILY SSF53098 40 216 1.18E-35 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS20495 982a052cd9487b2e4803abdaf449ed07 221 Pfam PF00929 Exonuclease 43 210 2.1E-18 T 19-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ALIDE2_RS20495 982a052cd9487b2e4803abdaf449ed07 221 PANTHER PTHR30231 3 216 5.5E-71 T 19-04-2016 ALIDE2_RS20495 982a052cd9487b2e4803abdaf449ed07 221 Gene3D G3DSA:3.30.420.10 40 218 2.0E-35 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS20150 6e080f3702397af9152574919c6e73dd 582 Pfam PF00905 Penicillin binding protein transpeptidase domain 258 554 3.4E-71 T 19-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ALIDE2_RS20150 6e080f3702397af9152574919c6e73dd 582 PANTHER PTHR30627 7 581 5.8E-197 T 19-04-2016 ALIDE2_RS20150 6e080f3702397af9152574919c6e73dd 582 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 216 7.1E-19 T 19-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ALIDE2_RS20150 6e080f3702397af9152574919c6e73dd 582 PANTHER PTHR30627:SF1 7 581 5.8E-197 T 19-04-2016 ALIDE2_RS20150 6e080f3702397af9152574919c6e73dd 582 SUPERFAMILY SSF56601 184 567 6.15E-89 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS20150 6e080f3702397af9152574919c6e73dd 582 Gene3D G3DSA:3.40.710.10 240 560 9.8E-85 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS20150 6e080f3702397af9152574919c6e73dd 582 Gene3D G3DSA:3.90.1310.10 140 239 7.7E-32 T 19-04-2016 ALIDE2_RS20150 6e080f3702397af9152574919c6e73dd 582 SUPERFAMILY SSF56519 62 232 6.02E-45 T 19-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ALIDE2_RS10585 3f81b6787407b3ca42e94f1b909b5e8a 151 SUPERFAMILY SSF54631 1 142 2.4E-26 T 19-04-2016 ALIDE2_RS10585 3f81b6787407b3ca42e94f1b909b5e8a 151 PANTHER PTHR11911 1 140 3.6E-21 T 19-04-2016 ALIDE2_RS10585 3f81b6787407b3ca42e94f1b909b5e8a 151 Pfam PF00571 CBS domain 15 60 4.9E-8 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS10585 3f81b6787407b3ca42e94f1b909b5e8a 151 Pfam PF00571 CBS domain 71 125 2.5E-6 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS10585 3f81b6787407b3ca42e94f1b909b5e8a 151 SMART SM00116 13 60 3.8E-6 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS10585 3f81b6787407b3ca42e94f1b909b5e8a 151 SMART SM00116 78 125 11.0 T 19-04-2016 IPR000644 CBS domain ALIDE2_RS10585 3f81b6787407b3ca42e94f1b909b5e8a 151 Gene3D G3DSA:3.10.580.10 1 126 1.1E-23 T 19-04-2016 ALIDE2_RS19285 a2127499eadcb21deb09118b338ec3ad 139 PANTHER PTHR33317 15 135 3.1E-23 T 19-04-2016 ALIDE2_RS19285 a2127499eadcb21deb09118b338ec3ad 139 Pfam PF03652 Holliday junction resolvase 14 136 6.2E-30 T 19-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ALIDE2_RS19285 a2127499eadcb21deb09118b338ec3ad 139 SMART SM00732 13 112 1.7E-22 T 19-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 ALIDE2_RS19285 a2127499eadcb21deb09118b338ec3ad 139 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 16 135 3.2E-22 T 19-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ALIDE2_RS19285 a2127499eadcb21deb09118b338ec3ad 139 Gene3D G3DSA:3.30.420.140 13 137 1.1E-33 T 19-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 ALIDE2_RS19285 a2127499eadcb21deb09118b338ec3ad 139 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 13 139 19.02 T 19-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ALIDE2_RS19285 a2127499eadcb21deb09118b338ec3ad 139 SUPERFAMILY SSF53098 14 138 2.58E-30 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS23525 d0015e2502df8a5b6f2fb36b1c59bdf1 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 442 2.4E-85 T 19-04-2016 IPR000914 Solute-binding protein family 5 domain ALIDE2_RS23525 d0015e2502df8a5b6f2fb36b1c59bdf1 528 SUPERFAMILY SSF53850 25 513 7.42E-127 T 19-04-2016 ALIDE2_RS23525 d0015e2502df8a5b6f2fb36b1c59bdf1 528 PIRSF PIRSF002741 22 524 5.2E-89 T 19-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ALIDE2_RS23525 d0015e2502df8a5b6f2fb36b1c59bdf1 528 PANTHER PTHR30290:SF24 28 511 5.1E-122 T 19-04-2016 ALIDE2_RS23525 d0015e2502df8a5b6f2fb36b1c59bdf1 528 Gene3D G3DSA:3.90.76.10 37 191 6.6E-39 T 19-04-2016 ALIDE2_RS23525 d0015e2502df8a5b6f2fb36b1c59bdf1 528 PANTHER PTHR30290 28 511 5.1E-122 T 19-04-2016 ALIDE2_RS23525 d0015e2502df8a5b6f2fb36b1c59bdf1 528 Gene3D G3DSA:3.10.105.10 303 499 2.5E-45 T 19-04-2016 ALIDE2_RS23525 d0015e2502df8a5b6f2fb36b1c59bdf1 528 Gene3D G3DSA:3.40.190.10 192 302 5.2E-36 T 19-04-2016 ALIDE2_RS04075 6b725d1588c124bfb06df60a1e0011ba 260 Pfam PF02405 Permease MlaE 46 256 2.6E-70 T 19-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 ALIDE2_RS04075 6b725d1588c124bfb06df60a1e0011ba 260 PANTHER PTHR30188:SF4 30 260 2.4E-90 T 19-04-2016 ALIDE2_RS04075 6b725d1588c124bfb06df60a1e0011ba 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 22 258 2.5E-78 T 19-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria ALIDE2_RS04075 6b725d1588c124bfb06df60a1e0011ba 260 PANTHER PTHR30188 30 260 2.4E-90 T 19-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 ALIDE2_RS04545 dde8caeed4246dd9b91583f955c3f2a2 437 SUPERFAMILY SSF53850 23 423 1.47E-72 T 19-04-2016 ALIDE2_RS04545 dde8caeed4246dd9b91583f955c3f2a2 437 Gene3D G3DSA:3.40.190.10 145 345 1.6E-37 T 19-04-2016 ALIDE2_RS04545 dde8caeed4246dd9b91583f955c3f2a2 437 Pfam PF13416 Bacterial extracellular solute-binding protein 42 355 6.4E-40 T 19-04-2016 ALIDE2_RS04545 dde8caeed4246dd9b91583f955c3f2a2 437 PANTHER PTHR30061 8 436 1.3E-132 T 19-04-2016 ALIDE2_RS04545 dde8caeed4246dd9b91583f955c3f2a2 437 PANTHER PTHR30061:SF7 8 436 1.3E-132 T 19-04-2016 ALIDE2_RS09685 25aa6ded83482b6464ad326379fa9d2a 152 Pfam PF09828 Chromate resistance exported protein 3 136 9.6E-53 T 19-04-2016 IPR018634 Chromate resistance exported protein ALIDE2_RS17695 a7284e734843f2e712877a8867e2f6d4 99 SUPERFAMILY SSF55073 2 92 7.85E-21 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS17695 a7284e734843f2e712877a8867e2f6d4 99 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1 91 9.7E-17 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS17695 a7284e734843f2e712877a8867e2f6d4 99 Gene3D G3DSA:3.30.70.270 2 92 8.6E-23 T 19-04-2016 ALIDE2_RS17695 a7284e734843f2e712877a8867e2f6d4 99 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1 89 9.2E-17 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS21140 287c62f829d63a5c2d2db48ddce18459 599 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS21140 287c62f829d63a5c2d2db48ddce18459 599 PANTHER PTHR24096 1 599 1.2E-162 T 19-04-2016 ALIDE2_RS21140 287c62f829d63a5c2d2db48ddce18459 599 Gene3D G3DSA:2.30.38.10 396 462 3.7E-16 T 19-04-2016 ALIDE2_RS21140 287c62f829d63a5c2d2db48ddce18459 599 Gene3D G3DSA:3.30.300.30 467 588 2.1E-5 T 19-04-2016 ALIDE2_RS21140 287c62f829d63a5c2d2db48ddce18459 599 Pfam PF00501 AMP-binding enzyme 13 469 1.1E-90 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS21140 287c62f829d63a5c2d2db48ddce18459 599 Gene3D G3DSA:3.40.50.980 338 395 1.6E-27 T 19-04-2016 ALIDE2_RS21140 287c62f829d63a5c2d2db48ddce18459 599 Gene3D G3DSA:3.40.50.980 195 286 1.6E-27 T 19-04-2016 ALIDE2_RS21140 287c62f829d63a5c2d2db48ddce18459 599 SUPERFAMILY SSF56801 6 291 3.66E-114 T 19-04-2016 ALIDE2_RS21140 287c62f829d63a5c2d2db48ddce18459 599 SUPERFAMILY SSF56801 341 598 3.66E-114 T 19-04-2016 ALIDE2_RS21140 287c62f829d63a5c2d2db48ddce18459 599 Gene3D G3DSA:3.40.50.980 5 194 3.5E-33 T 19-04-2016 ALIDE2_RS21140 287c62f829d63a5c2d2db48ddce18459 599 PANTHER PTHR24096:SF151 1 599 1.2E-162 T 19-04-2016 ALIDE2_RS17155 4a0a36a614021c286a4977b3294b58d6 146 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 141 8.6E-61 T 19-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ALIDE2_RS17155 4a0a36a614021c286a4977b3294b58d6 146 Pfam PF07977 FabA-like domain 11 136 9.6E-37 T 19-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ALIDE2_RS17155 4a0a36a614021c286a4977b3294b58d6 146 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 144 36.36 T 19-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ALIDE2_RS17155 4a0a36a614021c286a4977b3294b58d6 146 PANTHER PTHR30272 1 146 1.3E-77 T 19-04-2016 ALIDE2_RS17155 4a0a36a614021c286a4977b3294b58d6 146 Gene3D G3DSA:3.10.129.10 1 143 4.1E-59 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS17155 4a0a36a614021c286a4977b3294b58d6 146 SUPERFAMILY SSF54637 1 142 7.67E-49 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS05085 8ac02f29c1322a1fcfb2169615a8719f 278 Pfam PF02616 Segregation and condensation protein ScpA 62 273 2.8E-30 T 19-04-2016 IPR003768 Segregation and condensation protein A ALIDE2_RS05085 8ac02f29c1322a1fcfb2169615a8719f 278 PANTHER PTHR33969:SF2 29 273 2.4E-76 T 19-04-2016 ALIDE2_RS05085 8ac02f29c1322a1fcfb2169615a8719f 278 Hamap MF_01805 Segregation and condensation protein A [scpA]. 45 275 21.025 T 19-04-2016 IPR003768 Segregation and condensation protein A ALIDE2_RS05085 8ac02f29c1322a1fcfb2169615a8719f 278 PANTHER PTHR33969 29 273 2.4E-76 T 19-04-2016 ALIDE2_RS05135 244e79d63fbae6fb3212bc497f98d418 490 PANTHER PTHR11751 107 489 1.1E-142 T 19-04-2016 ALIDE2_RS05135 244e79d63fbae6fb3212bc497f98d418 490 PANTHER PTHR11751:SF407 107 489 1.1E-142 T 19-04-2016 ALIDE2_RS05135 244e79d63fbae6fb3212bc497f98d418 490 Gene3D G3DSA:3.40.640.10 155 379 5.4E-60 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS05135 244e79d63fbae6fb3212bc497f98d418 490 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 1.2E-6 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05135 244e79d63fbae6fb3212bc497f98d418 490 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 1.2E-6 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05135 244e79d63fbae6fb3212bc497f98d418 490 Gene3D G3DSA:1.10.10.10 22 90 8.5E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05135 244e79d63fbae6fb3212bc497f98d418 490 SUPERFAMILY SSF53383 131 489 5.41E-88 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS05135 244e79d63fbae6fb3212bc497f98d418 490 Pfam PF00155 Aminotransferase class I and II 162 407 2.1E-22 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ALIDE2_RS05135 244e79d63fbae6fb3212bc497f98d418 490 SMART SM00345 28 87 1.6E-13 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS05135 244e79d63fbae6fb3212bc497f98d418 490 SUPERFAMILY SSF46785 20 94 1.61E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05135 244e79d63fbae6fb3212bc497f98d418 490 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 87 1.1E-15 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS11280 fe56bc42fe43631d9ca065bd48992649 121 Pfam PF01042 Endoribonuclease L-PSP 4 115 2.7E-21 T 19-04-2016 IPR006175 YjgF/YER057c/UK114 family ALIDE2_RS11280 fe56bc42fe43631d9ca065bd48992649 121 Gene3D G3DSA:3.30.1330.40 6 117 4.1E-23 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ALIDE2_RS11280 fe56bc42fe43631d9ca065bd48992649 121 SUPERFAMILY SSF55298 3 117 1.38E-27 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ALIDE2_RS11280 fe56bc42fe43631d9ca065bd48992649 121 PANTHER PTHR11803 13 118 8.6E-26 T 19-04-2016 IPR006175 YjgF/YER057c/UK114 family ALIDE2_RS05545 0c11b168686e898948cde393ab3bb0a0 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 268 19.361 T 19-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 ALIDE2_RS05545 0c11b168686e898948cde393ab3bb0a0 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 267 1.1E-79 T 19-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 ALIDE2_RS05545 0c11b168686e898948cde393ab3bb0a0 271 PANTHER PTHR30589 1 267 1.9E-99 T 19-04-2016 ALIDE2_RS05545 0c11b168686e898948cde393ab3bb0a0 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 145 157 - T 19-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 ALIDE2_RS05545 0c11b168686e898948cde393ab3bb0a0 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 263 2.3E-78 T 19-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 ALIDE2_RS05545 0c11b168686e898948cde393ab3bb0a0 271 PANTHER PTHR30589:SF0 1 267 1.9E-99 T 19-04-2016 ALIDE2_RS02470 ba208cee0ff8c45dede9f3d0db9c88b4 338 PIRSF PIRSF017082 1 337 1.3E-82 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS02470 ba208cee0ff8c45dede9f3d0db9c88b4 338 PANTHER PTHR30349:SF16 15 306 5.8E-109 T 19-04-2016 ALIDE2_RS02470 ba208cee0ff8c45dede9f3d0db9c88b4 338 SUPERFAMILY SSF53850 121 298 4.78E-9 T 19-04-2016 ALIDE2_RS02470 ba208cee0ff8c45dede9f3d0db9c88b4 338 PANTHER PTHR30349 15 306 5.8E-109 T 19-04-2016 ALIDE2_RS02470 ba208cee0ff8c45dede9f3d0db9c88b4 338 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 333 4.2E-91 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS02545 15c29a0cc775bcb02a3a78ec4b50cb64 326 PANTHER PTHR30349:SF1 1 293 6.2E-73 T 19-04-2016 ALIDE2_RS02545 15c29a0cc775bcb02a3a78ec4b50cb64 326 SUPERFAMILY SSF53850 111 292 1.45E-9 T 19-04-2016 ALIDE2_RS02545 15c29a0cc775bcb02a3a78ec4b50cb64 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 305 6.7E-69 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS02545 15c29a0cc775bcb02a3a78ec4b50cb64 326 PANTHER PTHR30349 1 293 6.2E-73 T 19-04-2016 ALIDE2_RS02545 15c29a0cc775bcb02a3a78ec4b50cb64 326 PIRSF PIRSF017082 1 325 5.4E-69 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS07360 4655e03a4e15a17b7e28742a1d533318 414 Gene3D G3DSA:3.40.50.10540 3 229 8.9E-98 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07360 4655e03a4e15a17b7e28742a1d533318 414 Gene3D G3DSA:3.40.50.10540 318 414 8.9E-98 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07360 4655e03a4e15a17b7e28742a1d533318 414 PANTHER PTHR24023:SF593 35 354 9.0E-28 T 19-04-2016 ALIDE2_RS07360 4655e03a4e15a17b7e28742a1d533318 414 SUPERFAMILY SSF89796 5 414 1.57E-118 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07360 4655e03a4e15a17b7e28742a1d533318 414 Pfam PF02515 CoA-transferase family III 7 388 2.1E-109 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS07360 4655e03a4e15a17b7e28742a1d533318 414 Gene3D G3DSA:3.30.1540.10 235 317 6.7E-25 T 19-04-2016 ALIDE2_RS07360 4655e03a4e15a17b7e28742a1d533318 414 PANTHER PTHR24023 35 354 9.0E-28 T 19-04-2016 ALIDE2_RS16375 52e44e1af9fa6f8d635fb4d65732aed8 427 TIGRFAM TIGR04474 tcm_partner: three-Cys-motif partner protein 17 296 9.2E-69 T 19-04-2016 IPR031009 Three-Cys-motif partner protein ALIDE2_RS10460 221232fe40451336ae73663fcf0bf2f0 173 Pfam PF11454 Protein of unknown function (DUF3016) 31 168 2.8E-44 T 19-04-2016 IPR021557 Protein of unknown function DUF3016 ALIDE2_RS01040 e7c536ed540d202a7695d0e798c91471 512 Pfam PF00005 ABC transporter 20 173 8.3E-28 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS01040 e7c536ed540d202a7695d0e798c91471 512 Pfam PF00005 ABC transporter 291 440 8.1E-27 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS01040 e7c536ed540d202a7695d0e798c91471 512 PANTHER PTHR24220 5 374 4.2E-102 T 19-04-2016 ALIDE2_RS01040 e7c536ed540d202a7695d0e798c91471 512 SUPERFAMILY SSF52540 3 244 2.13E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01040 e7c536ed540d202a7695d0e798c91471 512 SUPERFAMILY SSF52540 274 508 2.61E-55 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01040 e7c536ed540d202a7695d0e798c91471 512 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 222 244 9.0E-9 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALIDE2_RS01040 e7c536ed540d202a7695d0e798c91471 512 Gene3D G3DSA:3.40.50.300 2 242 4.7E-67 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01040 e7c536ed540d202a7695d0e798c91471 512 Gene3D G3DSA:3.40.50.300 271 504 3.4E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01040 e7c536ed540d202a7695d0e798c91471 512 SMART SM00382 28 230 4.2E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS01040 e7c536ed540d202a7695d0e798c91471 512 SMART SM00382 300 510 1.2E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS01040 e7c536ed540d202a7695d0e798c91471 512 ProSitePatterns PS00211 ABC transporters family signature. 413 427 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS08140 75c7a487f8f9220472d4c14749964d5d 526 PANTHER PTHR22855:SF13 9 526 5.0E-255 T 19-04-2016 ALIDE2_RS08140 75c7a487f8f9220472d4c14749964d5d 526 Pfam PF01039 Carboxyl transferase domain 38 513 2.6E-127 T 19-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS08140 75c7a487f8f9220472d4c14749964d5d 526 SUPERFAMILY SSF52096 16 258 4.98E-65 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS08140 75c7a487f8f9220472d4c14749964d5d 526 Gene3D G3DSA:3.90.226.10 273 521 9.5E-75 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS08140 75c7a487f8f9220472d4c14749964d5d 526 Gene3D G3DSA:3.90.226.10 19 257 7.3E-66 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS08140 75c7a487f8f9220472d4c14749964d5d 526 SUPERFAMILY SSF52096 266 526 6.83E-78 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS08140 75c7a487f8f9220472d4c14749964d5d 526 PANTHER PTHR22855 9 526 5.0E-255 T 19-04-2016 ALIDE2_RS12415 cf1c8ce0d77050adf9532936e7e3b667 148 Gene3D G3DSA:3.30.300.20 26 139 2.5E-19 T 19-04-2016 IPR015946 K homology domain-like, alpha/beta ALIDE2_RS12415 cf1c8ce0d77050adf9532936e7e3b667 148 SUPERFAMILY SSF82784 7 139 6.54E-23 T 19-04-2016 IPR003718 OsmC/Ohr family ALIDE2_RS12415 cf1c8ce0d77050adf9532936e7e3b667 148 Pfam PF02566 OsmC-like protein 38 137 3.9E-12 T 19-04-2016 IPR003718 OsmC/Ohr family ALIDE2_RS18840 c8de95731fd2ed9de913bf1217d933de 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 22 247 1.4E-64 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS18840 c8de95731fd2ed9de913bf1217d933de 253 PANTHER PTHR18966 14 246 2.5E-64 T 19-04-2016 ALIDE2_RS18840 c8de95731fd2ed9de913bf1217d933de 253 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 44 57 - T 19-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 ALIDE2_RS18840 c8de95731fd2ed9de913bf1217d933de 253 SUPERFAMILY SSF53850 1 250 1.09E-66 T 19-04-2016 ALIDE2_RS18840 c8de95731fd2ed9de913bf1217d933de 253 SMART SM00062 21 249 1.5E-68 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ALIDE2_RS18840 c8de95731fd2ed9de913bf1217d933de 253 Gene3D G3DSA:3.40.190.10 109 205 2.0E-23 T 19-04-2016 ALIDE2_RS18840 c8de95731fd2ed9de913bf1217d933de 253 SMART SM00079 21 248 0.0056 T 19-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 ALIDE2_RS18840 c8de95731fd2ed9de913bf1217d933de 253 Gene3D G3DSA:3.40.190.10 208 249 3.0E-45 T 19-04-2016 ALIDE2_RS18840 c8de95731fd2ed9de913bf1217d933de 253 Gene3D G3DSA:3.40.190.10 21 107 3.0E-45 T 19-04-2016 ALIDE2_RS18840 c8de95731fd2ed9de913bf1217d933de 253 PANTHER PTHR18966:SF152 14 246 2.5E-64 T 19-04-2016 ALIDE2_RS01245 116d8fb85a10a536931d32afd8cde3ef 409 SUPERFAMILY SSF103473 7 401 1.31E-20 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS01245 116d8fb85a10a536931d32afd8cde3ef 409 PANTHER PTHR23537:SF1 1 405 3.2E-46 T 19-04-2016 ALIDE2_RS01245 116d8fb85a10a536931d32afd8cde3ef 409 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 22 397 5.5E-94 T 19-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB ALIDE2_RS01245 116d8fb85a10a536931d32afd8cde3ef 409 PANTHER PTHR23537 1 405 3.2E-46 T 19-04-2016 ALIDE2_RS01245 116d8fb85a10a536931d32afd8cde3ef 409 Gene3D G3DSA:1.20.1250.20 228 397 3.7E-5 T 19-04-2016 ALIDE2_RS01245 116d8fb85a10a536931d32afd8cde3ef 409 Gene3D G3DSA:1.20.1250.20 15 204 3.4E-11 T 19-04-2016 ALIDE2_RS12435 16c1bfaf420ef50840ef30c6b22d001a 430 PANTHER PTHR10632 1 426 1.2E-156 T 19-04-2016 ALIDE2_RS12435 16c1bfaf420ef50840ef30c6b22d001a 430 SUPERFAMILY SSF51905 257 341 7.02E-25 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12435 16c1bfaf420ef50840ef30c6b22d001a 430 SUPERFAMILY SSF51905 3 109 7.02E-25 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12435 16c1bfaf420ef50840ef30c6b22d001a 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 303 2.3E-16 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12435 16c1bfaf420ef50840ef30c6b22d001a 430 PANTHER PTHR10632:SF7 1 426 1.2E-156 T 19-04-2016 ALIDE2_RS12435 16c1bfaf420ef50840ef30c6b22d001a 430 Gene3D G3DSA:3.50.50.60 2 117 9.3E-34 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS12435 16c1bfaf420ef50840ef30c6b22d001a 430 Gene3D G3DSA:3.50.50.60 264 342 9.3E-34 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS07445 22789b89dec14afaa367c1377d387703 158 Gene3D G3DSA:3.10.129.10 44 142 7.6E-15 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS07445 22789b89dec14afaa367c1377d387703 158 SUPERFAMILY SSF54637 43 145 1.24E-15 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS01675 6ba95acc21bdb232fe2fc296bb235b39 522 Pfam PF07690 Major Facilitator Superfamily 28 420 6.5E-54 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS01675 6ba95acc21bdb232fe2fc296bb235b39 522 PANTHER PTHR23501:SF52 8 508 4.9E-218 T 19-04-2016 ALIDE2_RS01675 6ba95acc21bdb232fe2fc296bb235b39 522 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 24 503 1.2E-150 T 19-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 ALIDE2_RS01675 6ba95acc21bdb232fe2fc296bb235b39 522 SUPERFAMILY SSF103473 259 430 2.35E-67 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS01675 6ba95acc21bdb232fe2fc296bb235b39 522 SUPERFAMILY SSF103473 482 505 2.35E-67 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS01675 6ba95acc21bdb232fe2fc296bb235b39 522 SUPERFAMILY SSF103473 9 204 2.35E-67 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS01675 6ba95acc21bdb232fe2fc296bb235b39 522 PANTHER PTHR23501 8 508 4.9E-218 T 19-04-2016 ALIDE2_RS01675 6ba95acc21bdb232fe2fc296bb235b39 522 Gene3D G3DSA:1.20.1250.20 24 201 1.2E-29 T 19-04-2016 ALIDE2_RS01675 6ba95acc21bdb232fe2fc296bb235b39 522 Gene3D G3DSA:1.20.1250.20 487 506 1.5E-20 T 19-04-2016 ALIDE2_RS01675 6ba95acc21bdb232fe2fc296bb235b39 522 Gene3D G3DSA:1.20.1250.20 269 436 1.5E-20 T 19-04-2016 ALIDE2_RS09070 b503de04b54bb1f176b307cbf9115dcd 614 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 471 593 2.8E-48 T 19-04-2016 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal ALIDE2_RS09070 b503de04b54bb1f176b307cbf9115dcd 614 Pfam PF07514 Putative helicase 28 340 4.1E-126 T 19-04-2016 IPR011119 Uncharacterised domain, helicase/relaxase, putative ALIDE2_RS09070 b503de04b54bb1f176b307cbf9115dcd 614 Gene3D G3DSA:2.40.10.200 488 509 1.9E-9 T 19-04-2016 ALIDE2_RS09070 b503de04b54bb1f176b307cbf9115dcd 614 Gene3D G3DSA:2.40.10.200 544 595 1.9E-9 T 19-04-2016 ALIDE2_RS09070 b503de04b54bb1f176b307cbf9115dcd 614 SUPERFAMILY SSF46785 469 594 5.17E-41 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS09070 b503de04b54bb1f176b307cbf9115dcd 614 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 26 243 4.2E-93 T 19-04-2016 IPR022391 Integrating conjugative element relaxase, PFGI-1 class ALIDE2_RS14280 c45c7189b4d0dad7bcd1a89447c10875 128 Pfam PF04993 TfoX N-terminal domain 24 110 8.7E-13 T 19-04-2016 IPR007076 TfoX, N-terminal ALIDE2_RS14280 c45c7189b4d0dad7bcd1a89447c10875 128 SUPERFAMILY SSF159894 19 112 2.46E-12 T 19-04-2016 ALIDE2_RS14280 c45c7189b4d0dad7bcd1a89447c10875 128 Gene3D G3DSA:3.30.1460.30 19 110 8.1E-6 T 19-04-2016 IPR007076 TfoX, N-terminal ALIDE2_RS16630 d46914166a4a6f9c27b16e93239d3d62 254 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 122 252 3.7E-39 T 19-04-2016 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup ALIDE2_RS16630 d46914166a4a6f9c27b16e93239d3d62 254 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 124 234 3.1E-30 T 19-04-2016 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC ALIDE2_RS08655 6ef5746d22fea25aa9d25c74c8728e62 288 PANTHER PTHR31223:SF1 103 280 1.8E-64 T 19-04-2016 ALIDE2_RS08655 6ef5746d22fea25aa9d25c74c8728e62 288 Pfam PF03641 Possible lysine decarboxylase 144 273 1.8E-32 T 19-04-2016 IPR031100 LOG family ALIDE2_RS08655 6ef5746d22fea25aa9d25c74c8728e62 288 SUPERFAMILY SSF102405 109 275 1.98E-56 T 19-04-2016 ALIDE2_RS08655 6ef5746d22fea25aa9d25c74c8728e62 288 SUPERFAMILY SSF102405 31 70 1.98E-56 T 19-04-2016 ALIDE2_RS08655 6ef5746d22fea25aa9d25c74c8728e62 288 Gene3D G3DSA:3.40.50.450 38 71 2.3E-68 T 19-04-2016 ALIDE2_RS08655 6ef5746d22fea25aa9d25c74c8728e62 288 Gene3D G3DSA:3.40.50.450 110 281 2.3E-68 T 19-04-2016 ALIDE2_RS08655 6ef5746d22fea25aa9d25c74c8728e62 288 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 131 275 1.1E-32 T 19-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG ALIDE2_RS08655 6ef5746d22fea25aa9d25c74c8728e62 288 PANTHER PTHR31223 103 280 1.8E-64 T 19-04-2016 ALIDE2_RS09605 4ec9e95e19b0de5aba019ec409cf9507 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 63 2.9E-8 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS09605 4ec9e95e19b0de5aba019ec409cf9507 202 Pfam PF08359 YsiA-like protein, C-terminal region 70 176 1.1E-4 T 19-04-2016 IPR013570 Transcription regulator YsiA, C-terminal ALIDE2_RS09605 4ec9e95e19b0de5aba019ec409cf9507 202 Gene3D G3DSA:1.10.10.60 11 64 1.8E-13 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS09605 4ec9e95e19b0de5aba019ec409cf9507 202 PANTHER PTHR30055 1 179 5.6E-29 T 19-04-2016 ALIDE2_RS09605 4ec9e95e19b0de5aba019ec409cf9507 202 Gene3D G3DSA:1.10.357.10 65 200 8.2E-28 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS09605 4ec9e95e19b0de5aba019ec409cf9507 202 SUPERFAMILY SSF48498 84 199 2.76E-25 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS09605 4ec9e95e19b0de5aba019ec409cf9507 202 SUPERFAMILY SSF46689 6 86 1.59E-12 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS15050 36bc5f415057eed7c876a597c8a0d2b6 352 PANTHER PTHR21716 7 343 3.8E-92 T 19-04-2016 IPR002549 Transmembrane protein TqsA-like ALIDE2_RS15050 36bc5f415057eed7c876a597c8a0d2b6 352 PANTHER PTHR21716:SF13 7 343 3.8E-92 T 19-04-2016 ALIDE2_RS15050 36bc5f415057eed7c876a597c8a0d2b6 352 Pfam PF01594 Domain of unknown function DUF20 12 341 2.6E-52 T 19-04-2016 IPR002549 Transmembrane protein TqsA-like ALIDE2_RS19890 3341308381ae59f108a2b06682c8d96c 202 PANTHER PTHR10884 31 181 7.3E-71 T 19-04-2016 ALIDE2_RS19890 3341308381ae59f108a2b06682c8d96c 202 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 90 151 7.0E-27 T 19-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 ALIDE2_RS19890 3341308381ae59f108a2b06682c8d96c 202 SUPERFAMILY SSF143243 11 185 3.01E-57 T 19-04-2016 ALIDE2_RS19890 3341308381ae59f108a2b06682c8d96c 202 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 35 164 1.5E-44 T 19-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 ALIDE2_RS19890 3341308381ae59f108a2b06682c8d96c 202 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 124 145 - T 19-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 ALIDE2_RS19890 3341308381ae59f108a2b06682c8d96c 202 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 11 171 34.624 T 19-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 ALIDE2_RS19890 3341308381ae59f108a2b06682c8d96c 202 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 35 162 3.8E-42 T 19-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 ALIDE2_RS19710 f07ac7816221f4340a2425404d8529f4 245 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 9 243 2.0E-116 T 19-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 ALIDE2_RS19710 f07ac7816221f4340a2425404d8529f4 245 PANTHER PTHR11953:SF0 9 245 9.8E-80 T 19-04-2016 ALIDE2_RS19710 f07ac7816221f4340a2425404d8529f4 245 ProSitePatterns PS01277 Ribonuclease PH signature. 123 136 - T 19-04-2016 IPR018336 Ribonuclease PH, conserved site ALIDE2_RS19710 f07ac7816221f4340a2425404d8529f4 245 SUPERFAMILY SSF54211 9 187 4.71E-44 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS19710 f07ac7816221f4340a2425404d8529f4 245 Gene3D G3DSA:3.30.230.70 14 242 1.3E-31 T 19-04-2016 IPR027408 PNPase/RNase PH domain ALIDE2_RS19710 f07ac7816221f4340a2425404d8529f4 245 Pfam PF03725 3' exoribonuclease family, domain 2 165 231 3.0E-11 T 19-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 ALIDE2_RS19710 f07ac7816221f4340a2425404d8529f4 245 PANTHER PTHR11953 9 245 9.8E-80 T 19-04-2016 ALIDE2_RS19710 f07ac7816221f4340a2425404d8529f4 245 SUPERFAMILY SSF55666 159 243 1.96E-24 T 19-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 ALIDE2_RS19710 f07ac7816221f4340a2425404d8529f4 245 Pfam PF01138 3' exoribonuclease family, domain 1 17 147 1.5E-22 T 19-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 ALIDE2_RS19710 f07ac7816221f4340a2425404d8529f4 245 Hamap MF_00564 Ribonuclease PH [rph]. 8 244 48.655 T 19-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 ALIDE2_RS14315 6a7b4bc23cb968cf6b4c7943f59f642f 332 PIRSF PIRSF017082 1 332 1.1E-80 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS14315 6a7b4bc23cb968cf6b4c7943f59f642f 332 PANTHER PTHR30349:SF16 1 304 7.0E-81 T 19-04-2016 ALIDE2_RS14315 6a7b4bc23cb968cf6b4c7943f59f642f 332 SUPERFAMILY SSF53850 120 299 1.19E-16 T 19-04-2016 ALIDE2_RS14315 6a7b4bc23cb968cf6b4c7943f59f642f 332 PANTHER PTHR30349 1 304 7.0E-81 T 19-04-2016 ALIDE2_RS14315 6a7b4bc23cb968cf6b4c7943f59f642f 332 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 328 7.2E-87 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS14315 6a7b4bc23cb968cf6b4c7943f59f642f 332 Gene3D G3DSA:3.40.190.10 133 232 2.2E-4 T 19-04-2016 ALIDE2_RS03275 03c9b8f6957a510082ca5292d1f183f3 333 SUPERFAMILY SSF53335 230 331 8.82E-18 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS03275 03c9b8f6957a510082ca5292d1f183f3 333 SUPERFAMILY SSF53335 63 145 8.82E-18 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS03275 03c9b8f6957a510082ca5292d1f183f3 333 Pfam PF01728 FtsJ-like methyltransferase 63 329 2.8E-18 T 19-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 ALIDE2_RS03275 03c9b8f6957a510082ca5292d1f183f3 333 Gene3D G3DSA:3.10.290.10 1 94 3.0E-11 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS03275 03c9b8f6957a510082ca5292d1f183f3 333 Gene3D G3DSA:3.40.50.150 95 124 1.2E-4 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS03275 03c9b8f6957a510082ca5292d1f183f3 333 Gene3D G3DSA:3.40.50.150 206 275 1.2E-4 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS03275 03c9b8f6957a510082ca5292d1f183f3 333 PANTHER PTHR32319 1 145 1.4E-75 T 19-04-2016 ALIDE2_RS03275 03c9b8f6957a510082ca5292d1f183f3 333 PANTHER PTHR32319 231 333 1.4E-75 T 19-04-2016 ALIDE2_RS03275 03c9b8f6957a510082ca5292d1f183f3 333 PANTHER PTHR32319:SF0 1 145 1.4E-75 T 19-04-2016 ALIDE2_RS03275 03c9b8f6957a510082ca5292d1f183f3 333 PANTHER PTHR32319:SF0 231 333 1.4E-75 T 19-04-2016 ALIDE2_RS15080 ffe81f8fe48962d626db4fad8f874823 545 PANTHER PTHR24220:SF574 16 420 1.4E-148 T 19-04-2016 ALIDE2_RS15080 ffe81f8fe48962d626db4fad8f874823 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 518 542 4.5E-4 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS15080 ffe81f8fe48962d626db4fad8f874823 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 279 6.7E-5 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS15080 ffe81f8fe48962d626db4fad8f874823 545 SUPERFAMILY SSF52540 14 258 1.36E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15080 ffe81f8fe48962d626db4fad8f874823 545 Pfam PF00005 ABC transporter 31 186 2.8E-25 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS15080 ffe81f8fe48962d626db4fad8f874823 545 Pfam PF00005 ABC transporter 309 467 1.8E-30 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS15080 ffe81f8fe48962d626db4fad8f874823 545 Gene3D G3DSA:3.40.50.300 13 260 2.4E-73 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15080 ffe81f8fe48962d626db4fad8f874823 545 Gene3D G3DSA:3.40.50.300 300 540 2.2E-71 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15080 ffe81f8fe48962d626db4fad8f874823 545 SMART SM00382 39 236 1.1E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS15080 ffe81f8fe48962d626db4fad8f874823 545 SMART SM00382 317 516 1.8E-16 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS15080 ffe81f8fe48962d626db4fad8f874823 545 SUPERFAMILY SSF52540 302 538 1.13E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15080 ffe81f8fe48962d626db4fad8f874823 545 PANTHER PTHR24220 16 420 1.4E-148 T 19-04-2016 ALIDE2_RS15080 ffe81f8fe48962d626db4fad8f874823 545 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS15080 ffe81f8fe48962d626db4fad8f874823 545 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS15375 12362fd7d423d7b3947b9cc8881e33e1 318 SUPERFAMILY SSF52402 14 226 3.72E-56 T 19-04-2016 ALIDE2_RS15375 12362fd7d423d7b3947b9cc8881e33e1 318 PIRSF PIRSF002936 9 318 1.0E-126 T 19-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 ALIDE2_RS15375 12362fd7d423d7b3947b9cc8881e33e1 318 PANTHER PTHR23293 260 318 9.0E-62 T 19-04-2016 ALIDE2_RS15375 12362fd7d423d7b3947b9cc8881e33e1 318 PANTHER PTHR23293 9 174 9.0E-62 T 19-04-2016 ALIDE2_RS15375 12362fd7d423d7b3947b9cc8881e33e1 318 PANTHER PTHR23293 194 227 9.0E-62 T 19-04-2016 ALIDE2_RS15375 12362fd7d423d7b3947b9cc8881e33e1 318 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 39 271 4.1E-43 T 19-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 ALIDE2_RS15375 12362fd7d423d7b3947b9cc8881e33e1 318 PANTHER PTHR23293:SF6 260 318 9.0E-62 T 19-04-2016 ALIDE2_RS15375 12362fd7d423d7b3947b9cc8881e33e1 318 PANTHER PTHR23293:SF6 9 174 9.0E-62 T 19-04-2016 ALIDE2_RS15375 12362fd7d423d7b3947b9cc8881e33e1 318 PANTHER PTHR23293:SF6 194 227 9.0E-62 T 19-04-2016 ALIDE2_RS15375 12362fd7d423d7b3947b9cc8881e33e1 318 Gene3D G3DSA:3.40.50.620 10 226 1.4E-48 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS15375 12362fd7d423d7b3947b9cc8881e33e1 318 Gene3D G3DSA:3.40.50.620 259 266 1.4E-48 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS17785 cc46161791fc55c6765b5529726d74d6 400 Gene3D G3DSA:3.40.50.2300 24 153 1.1E-32 T 19-04-2016 ALIDE2_RS17785 cc46161791fc55c6765b5529726d74d6 400 Gene3D G3DSA:3.40.50.2300 304 349 1.1E-32 T 19-04-2016 ALIDE2_RS17785 cc46161791fc55c6765b5529726d74d6 400 PANTHER PTHR30483 1 400 2.9E-185 T 19-04-2016 ALIDE2_RS17785 cc46161791fc55c6765b5529726d74d6 400 Gene3D G3DSA:3.40.50.2300 158 303 2.0E-17 T 19-04-2016 ALIDE2_RS17785 cc46161791fc55c6765b5529726d74d6 400 PANTHER PTHR30483:SF17 1 400 2.9E-185 T 19-04-2016 ALIDE2_RS17785 cc46161791fc55c6765b5529726d74d6 400 SUPERFAMILY SSF53822 30 399 7.07E-92 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS17785 cc46161791fc55c6765b5529726d74d6 400 Pfam PF13458 Periplasmic binding protein 30 364 1.2E-85 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.1E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.1E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.1E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.1E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.1E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.1E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 Gene3D G3DSA:3.40.50.720 1 257 2.0E-77 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 SUPERFAMILY SSF51735 3 258 4.03E-71 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 9.5E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 9.5E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 9.5E-13 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 PANTHER PTHR24322 155 187 4.6E-56 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 PANTHER PTHR24322 9 139 4.6E-56 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 Pfam PF00106 short chain dehydrogenase 5 199 1.6E-55 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 PANTHER PTHR24322:SF328 155 187 4.6E-56 T 19-04-2016 ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 PANTHER PTHR24322:SF328 9 139 4.6E-56 T 19-04-2016 ALIDE2_RS17940 8e81d0f7e25e3a1203612790a523d220 260 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 260 4.1E-107 T 19-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 ALIDE2_RS10755 5741b1583e7958cedc20ecc75008df14 419 Gene3D G3DSA:1.10.443.10 237 410 1.1E-33 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS10755 5741b1583e7958cedc20ecc75008df14 419 PANTHER PTHR30349:SF5 131 414 1.3E-33 T 19-04-2016 ALIDE2_RS10755 5741b1583e7958cedc20ecc75008df14 419 Pfam PF00589 Phage integrase family 238 403 1.7E-24 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS10755 5741b1583e7958cedc20ecc75008df14 419 SUPERFAMILY SSF56349 137 411 1.09E-40 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS10755 5741b1583e7958cedc20ecc75008df14 419 Gene3D G3DSA:1.10.150.130 129 217 3.1E-11 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS10755 5741b1583e7958cedc20ecc75008df14 419 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 130 209 5.8E-7 T 19-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ALIDE2_RS10755 5741b1583e7958cedc20ecc75008df14 419 PANTHER PTHR30349 131 414 1.3E-33 T 19-04-2016 ALIDE2_RS09380 118ba4fbc152e840f60caaf9fd112736 185 Gene3D G3DSA:3.40.190.10 86 145 6.6E-4 T 19-04-2016 ALIDE2_RS09380 118ba4fbc152e840f60caaf9fd112736 185 PANTHER PTHR30349 2 178 6.0E-45 T 19-04-2016 ALIDE2_RS09380 118ba4fbc152e840f60caaf9fd112736 185 SUPERFAMILY SSF53850 33 178 1.19E-10 T 19-04-2016 ALIDE2_RS09380 118ba4fbc152e840f60caaf9fd112736 185 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 2 178 2.0E-50 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS09380 118ba4fbc152e840f60caaf9fd112736 185 PANTHER PTHR30349:SF32 2 178 6.0E-45 T 19-04-2016 ALIDE2_RS09650 93f5ad59a9ebe7ab2e180208047d315c 149 Pfam PF09509 Protein of unknown function (Hypoth_ymh) 18 138 2.0E-43 T 19-04-2016 IPR012654 Conserved hypothetical protein CHP02391 ALIDE2_RS09650 93f5ad59a9ebe7ab2e180208047d315c 149 TIGRFAM TIGR02391 hypoth_ymh: TIGR02391 family protein 20 141 1.1E-39 T 19-04-2016 IPR012654 Conserved hypothetical protein CHP02391 ALIDE2_RS07620 fbe76f420b5c5d93cebd5123f8bbd9ff 282 Pfam PF13452 N-terminal half of MaoC dehydratase 76 142 7.5E-9 T 19-04-2016 ALIDE2_RS07620 fbe76f420b5c5d93cebd5123f8bbd9ff 282 PANTHER PTHR28152:SF1 47 282 1.4E-67 T 19-04-2016 ALIDE2_RS07620 fbe76f420b5c5d93cebd5123f8bbd9ff 282 SUPERFAMILY SSF54637 88 144 4.81E-5 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS07620 fbe76f420b5c5d93cebd5123f8bbd9ff 282 SUPERFAMILY SSF54637 169 279 6.17E-15 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS07620 fbe76f420b5c5d93cebd5123f8bbd9ff 282 Gene3D G3DSA:3.10.129.10 137 247 4.6E-10 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS07620 fbe76f420b5c5d93cebd5123f8bbd9ff 282 PANTHER PTHR28152 47 282 1.4E-67 T 19-04-2016 ALIDE2_RS21845 8d9c81942f2fe449c32e348e3d89e1c3 204 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 4.3E-7 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS21845 8d9c81942f2fe449c32e348e3d89e1c3 204 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS21845 8d9c81942f2fe449c32e348e3d89e1c3 204 Gene3D G3DSA:3.30.700.10 10 65 7.1E-5 T 19-04-2016 ALIDE2_RS21845 8d9c81942f2fe449c32e348e3d89e1c3 204 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 29 1.3E-7 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS21845 8d9c81942f2fe449c32e348e3d89e1c3 204 Pfam PF12019 Type II transport protein GspH 45 160 6.7E-10 T 19-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 ALIDE2_RS21845 8d9c81942f2fe449c32e348e3d89e1c3 204 SUPERFAMILY SSF54523 10 115 8.63E-16 T 19-04-2016 ALIDE2_RS19365 3c25a4e15cab804535b46874fd1c7f71 285 Pfam PF02630 SCO1/SenC 56 148 1.8E-9 T 19-04-2016 IPR003782 Copper chaperone SCO1/SenC ALIDE2_RS19365 3c25a4e15cab804535b46874fd1c7f71 285 SUPERFAMILY SSF52833 51 209 6.65E-28 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS19365 3c25a4e15cab804535b46874fd1c7f71 285 PANTHER PTHR12151 10 277 2.6E-23 T 19-04-2016 IPR003782 Copper chaperone SCO1/SenC ALIDE2_RS19365 3c25a4e15cab804535b46874fd1c7f71 285 Gene3D G3DSA:3.40.30.10 50 210 4.4E-34 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS15980 733c89bc7f41018ed842cd42e78d1e7a 348 Gene3D G3DSA:3.20.20.410 37 341 1.1E-64 T 19-04-2016 IPR002763 Protein of unknown function DUF72 ALIDE2_RS15980 733c89bc7f41018ed842cd42e78d1e7a 348 SUPERFAMILY SSF117396 47 341 5.49E-52 T 19-04-2016 IPR002763 Protein of unknown function DUF72 ALIDE2_RS15980 733c89bc7f41018ed842cd42e78d1e7a 348 Pfam PF01904 Protein of unknown function DUF72 72 339 8.0E-42 T 19-04-2016 IPR002763 Protein of unknown function DUF72 ALIDE2_RS15980 733c89bc7f41018ed842cd42e78d1e7a 348 PANTHER PTHR30348 46 269 1.6E-15 T 19-04-2016 ALIDE2_RS20295 3ed0121ef7601751d60e9c9ae511db09 149 Gene3D G3DSA:1.20.1290.10 26 143 1.5E-15 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS20295 3ed0121ef7601751d60e9c9ae511db09 149 PANTHER PTHR33570:SF2 11 139 8.9E-37 T 19-04-2016 ALIDE2_RS20295 3ed0121ef7601751d60e9c9ae511db09 149 SUPERFAMILY SSF69118 4 145 1.53E-24 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS20295 3ed0121ef7601751d60e9c9ae511db09 149 PANTHER PTHR33570 11 139 8.9E-37 T 19-04-2016 ALIDE2_RS20295 3ed0121ef7601751d60e9c9ae511db09 149 Pfam PF02627 Carboxymuconolactone decarboxylase family 38 127 3.2E-12 T 19-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS17420 d44419531efeef35e7fdb06a251d8ba1 172 PANTHER PTHR20941 17 160 3.0E-53 T 19-04-2016 ALIDE2_RS17420 d44419531efeef35e7fdb06a251d8ba1 172 Gene3D G3DSA:3.30.70.560 16 157 7.1E-50 T 19-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 ALIDE2_RS17420 d44419531efeef35e7fdb06a251d8ba1 172 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 18 145 2.2E-38 T 19-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 ALIDE2_RS17420 d44419531efeef35e7fdb06a251d8ba1 172 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 18 145 1.4E-36 T 19-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 ALIDE2_RS17420 d44419531efeef35e7fdb06a251d8ba1 172 SUPERFAMILY SSF55083 16 152 1.26E-48 T 19-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 ALIDE2_RS17420 d44419531efeef35e7fdb06a251d8ba1 172 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 100 111 - T 19-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 ALIDE2_RS07250 5930f8c7634e776be22e45f371287b73 271 PRINTS PR00108 Thymidylate synthase family signature 148 163 3.0E-47 T 19-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 ALIDE2_RS07250 5930f8c7634e776be22e45f371287b73 271 PRINTS PR00108 Thymidylate synthase family signature 122 141 3.0E-47 T 19-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 ALIDE2_RS07250 5930f8c7634e776be22e45f371287b73 271 PRINTS PR00108 Thymidylate synthase family signature 166 192 3.0E-47 T 19-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 ALIDE2_RS07250 5930f8c7634e776be22e45f371287b73 271 PRINTS PR00108 Thymidylate synthase family signature 204 221 3.0E-47 T 19-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 ALIDE2_RS07250 5930f8c7634e776be22e45f371287b73 271 PRINTS PR00108 Thymidylate synthase family signature 48 69 3.0E-47 T 19-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 ALIDE2_RS07250 5930f8c7634e776be22e45f371287b73 271 Pfam PF00303 Thymidylate synthase 8 271 3.5E-123 T 19-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 ALIDE2_RS07250 5930f8c7634e776be22e45f371287b73 271 PANTHER PTHR11548 9 271 3.3E-195 T 19-04-2016 ALIDE2_RS07250 5930f8c7634e776be22e45f371287b73 271 Gene3D G3DSA:3.30.572.10 8 271 1.6E-133 T 19-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 ALIDE2_RS07250 5930f8c7634e776be22e45f371287b73 271 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 8 90 5.4E-38 T 19-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 ALIDE2_RS07250 5930f8c7634e776be22e45f371287b73 271 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 94 271 6.7E-93 T 19-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 ALIDE2_RS07250 5930f8c7634e776be22e45f371287b73 271 SUPERFAMILY SSF55831 4 271 3.53E-131 T 19-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 ALIDE2_RS07250 5930f8c7634e776be22e45f371287b73 271 Hamap MF_00008 Thymidylate synthase [thyA]. 7 271 44.864 T 19-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 ALIDE2_RS07250 5930f8c7634e776be22e45f371287b73 271 ProSitePatterns PS00091 Thymidylate synthase active site. 133 161 - T 19-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 ALIDE2_RS06970 31e533ec7d739be85b385cc2e1c4749c 304 Gene3D G3DSA:1.10.10.10 5 87 5.4E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06970 31e533ec7d739be85b385cc2e1c4749c 304 Gene3D G3DSA:3.40.190.10 194 250 4.2E-8 T 19-04-2016 ALIDE2_RS06970 31e533ec7d739be85b385cc2e1c4749c 304 PANTHER PTHR30126 4 299 1.2E-87 T 19-04-2016 ALIDE2_RS06970 31e533ec7d739be85b385cc2e1c4749c 304 Pfam PF03466 LysR substrate binding domain 89 285 2.6E-35 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS06970 31e533ec7d739be85b385cc2e1c4749c 304 SUPERFAMILY SSF46785 5 112 4.59E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06970 31e533ec7d739be85b385cc2e1c4749c 304 Gene3D G3DSA:3.40.190.10 91 193 8.3E-19 T 19-04-2016 ALIDE2_RS06970 31e533ec7d739be85b385cc2e1c4749c 304 SUPERFAMILY SSF53850 90 279 1.0E-33 T 19-04-2016 ALIDE2_RS06970 31e533ec7d739be85b385cc2e1c4749c 304 PANTHER PTHR30126:SF33 4 299 1.2E-87 T 19-04-2016 ALIDE2_RS06970 31e533ec7d739be85b385cc2e1c4749c 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.9E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS23100 01d426d14afaa675ea35858ff823ca89 103 Pfam PF13670 Peptidase propeptide and YPEB domain 17 94 2.7E-13 T 19-04-2016 IPR025711 PepSY domain ALIDE2_RS01630 c4a221cf927c0d7596e9054d72f940ab 267 PANTHER PTHR24220 9 249 9.9E-97 T 19-04-2016 ALIDE2_RS01630 c4a221cf927c0d7596e9054d72f940ab 267 Gene3D G3DSA:3.40.50.300 4 240 2.3E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01630 c4a221cf927c0d7596e9054d72f940ab 267 SUPERFAMILY SSF52540 6 234 3.78E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS01630 c4a221cf927c0d7596e9054d72f940ab 267 SMART SM00382 36 222 4.0E-13 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS01630 c4a221cf927c0d7596e9054d72f940ab 267 PANTHER PTHR24220:SF483 9 249 9.9E-97 T 19-04-2016 ALIDE2_RS01630 c4a221cf927c0d7596e9054d72f940ab 267 Pfam PF00005 ABC transporter 28 174 1.1E-27 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS12150 69108d6b1ba60d0b0f386408599cdaed 184 Gene3D G3DSA:3.90.1720.10 43 168 5.9E-46 T 19-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS12150 69108d6b1ba60d0b0f386408599cdaed 184 SUPERFAMILY SSF54001 44 168 1.99E-43 T 19-04-2016 ALIDE2_RS12150 69108d6b1ba60d0b0f386408599cdaed 184 PANTHER PTHR21666 44 167 2.8E-40 T 19-04-2016 ALIDE2_RS12150 69108d6b1ba60d0b0f386408599cdaed 184 Pfam PF00877 NlpC/P60 family 59 166 9.8E-30 T 19-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS12100 c005f3b5d283b4a987cea96db7cee3fc 110 PANTHER PTHR36455 2 96 5.7E-13 T 19-04-2016 ALIDE2_RS12100 c005f3b5d283b4a987cea96db7cee3fc 110 PANTHER PTHR36455:SF1 2 96 5.7E-13 T 19-04-2016 ALIDE2_RS12100 c005f3b5d283b4a987cea96db7cee3fc 110 Pfam PF05717 IS66 Orf2 like protein 6 97 1.2E-24 T 19-04-2016 IPR008878 Transposase IS66, Orf2 ALIDE2_RS17120 5d4b88cfad7b0b838c1dd484f5253186 77 SUPERFAMILY SSF46955 10 65 9.15E-6 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS17120 5d4b88cfad7b0b838c1dd484f5253186 77 Pfam PF12728 Helix-turn-helix domain 10 65 3.0E-9 T 19-04-2016 ALIDE2_RS17120 5d4b88cfad7b0b838c1dd484f5253186 77 Gene3D G3DSA:1.10.10.10 10 68 1.2E-6 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS16135 418bd829ae726095fd5b7d57642b9814 495 PANTHER PTHR32057 19 495 1.7E-197 T 19-04-2016 ALIDE2_RS16135 418bd829ae726095fd5b7d57642b9814 495 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 20 463 1.1E-135 T 19-04-2016 IPR003846 Uncharacterised protein family UPF0061 ALIDE2_RS16135 418bd829ae726095fd5b7d57642b9814 495 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 15 481 44.118 T 19-04-2016 IPR003846 Uncharacterised protein family UPF0061 ALIDE2_RS16170 52586781f6023b36ba7072caa93c8330 106 SUPERFAMILY SSF47781 17 83 1.02E-12 T 19-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 ALIDE2_RS16170 52586781f6023b36ba7072caa93c8330 106 Gene3D G3DSA:1.10.150.280 19 83 2.6E-16 T 19-04-2016 ALIDE2_RS16170 52586781f6023b36ba7072caa93c8330 106 Pfam PF12836 Helix-hairpin-helix motif 24 78 2.6E-11 T 19-04-2016 ALIDE2_RS03830 b6b999c2c8f9b6de68d15086c9c5cfda 338 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 244 328 2.4E-29 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS03830 b6b999c2c8f9b6de68d15086c9c5cfda 338 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS03830 b6b999c2c8f9b6de68d15086c9c5cfda 338 SUPERFAMILY SSF52540 34 265 2.77E-69 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03830 b6b999c2c8f9b6de68d15086c9c5cfda 338 PANTHER PTHR24220:SF336 10 20 6.8E-148 T 19-04-2016 ALIDE2_RS03830 b6b999c2c8f9b6de68d15086c9c5cfda 338 PANTHER PTHR24220:SF336 37 332 6.8E-148 T 19-04-2016 ALIDE2_RS03830 b6b999c2c8f9b6de68d15086c9c5cfda 338 SMART SM00382 49 243 2.9E-17 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS03830 b6b999c2c8f9b6de68d15086c9c5cfda 338 Gene3D G3DSA:3.40.50.300 34 267 1.8E-77 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03830 b6b999c2c8f9b6de68d15086c9c5cfda 338 PANTHER PTHR24220 10 20 6.8E-148 T 19-04-2016 ALIDE2_RS03830 b6b999c2c8f9b6de68d15086c9c5cfda 338 PANTHER PTHR24220 37 332 6.8E-148 T 19-04-2016 ALIDE2_RS03830 b6b999c2c8f9b6de68d15086c9c5cfda 338 Pfam PF00005 ABC transporter 41 194 5.2E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS03830 b6b999c2c8f9b6de68d15086c9c5cfda 338 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 309 3.9E-19 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ALIDE2_RS15515 411f5e22aea1a5adf4a49efd486bb00b 278 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 66 88 - T 19-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ALIDE2_RS15515 411f5e22aea1a5adf4a49efd486bb00b 278 Pfam PF01066 CDP-alcohol phosphatidyltransferase 24 88 8.4E-15 T 19-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ALIDE2_RS15515 411f5e22aea1a5adf4a49efd486bb00b 278 PANTHER PTHR15362 18 158 2.8E-34 T 19-04-2016 ALIDE2_RS15515 411f5e22aea1a5adf4a49efd486bb00b 278 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 31 161 1.2E-35 T 19-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 ALIDE2_RS17335 aa072ca56422f8c41dcbaa85a8ddd0e0 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.1E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS17335 aa072ca56422f8c41dcbaa85a8ddd0e0 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.1E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS17335 aa072ca56422f8c41dcbaa85a8ddd0e0 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.1E-10 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS17335 aa072ca56422f8c41dcbaa85a8ddd0e0 316 Gene3D G3DSA:1.10.10.10 1 82 5.7E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17335 aa072ca56422f8c41dcbaa85a8ddd0e0 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.7E-21 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS17335 aa072ca56422f8c41dcbaa85a8ddd0e0 316 PANTHER PTHR30537 1 311 1.5E-99 T 19-04-2016 ALIDE2_RS17335 aa072ca56422f8c41dcbaa85a8ddd0e0 316 SUPERFAMILY SSF46785 3 82 3.85E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17335 aa072ca56422f8c41dcbaa85a8ddd0e0 316 Gene3D G3DSA:3.40.190.10 93 173 1.0E-6 T 19-04-2016 ALIDE2_RS17335 aa072ca56422f8c41dcbaa85a8ddd0e0 316 Gene3D G3DSA:3.40.190.10 174 282 1.4E-32 T 19-04-2016 ALIDE2_RS17335 aa072ca56422f8c41dcbaa85a8ddd0e0 316 Pfam PF03466 LysR substrate binding domain 91 311 5.8E-32 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS17335 aa072ca56422f8c41dcbaa85a8ddd0e0 316 PANTHER PTHR30537:SF15 1 311 1.5E-99 T 19-04-2016 ALIDE2_RS17335 aa072ca56422f8c41dcbaa85a8ddd0e0 316 SUPERFAMILY SSF53850 92 312 1.25E-30 T 19-04-2016 ALIDE2_RS24050 c4b1d970c1ff352ec7825ee175bb26e0 336 Gene3D G3DSA:3.40.50.300 16 232 6.2E-39 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS24050 c4b1d970c1ff352ec7825ee175bb26e0 336 SMART SM00382 23 198 2.3E-5 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS24050 c4b1d970c1ff352ec7825ee175bb26e0 336 Pfam PF13481 AAA domain 11 174 4.9E-32 T 19-04-2016 ALIDE2_RS24050 c4b1d970c1ff352ec7825ee175bb26e0 336 SUPERFAMILY SSF52540 16 222 2.48E-19 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04195 3f3bfe86ea34ae03aed1356e98ff28f6 1267 Gene3D G3DSA:1.25.40.10 628 688 1.0E-6 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS04195 3f3bfe86ea34ae03aed1356e98ff28f6 1267 Gene3D G3DSA:1.25.40.10 537 567 1.0E-6 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS04195 3f3bfe86ea34ae03aed1356e98ff28f6 1267 Gene3D G3DSA:1.25.40.10 158 211 1.0E-6 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS04195 3f3bfe86ea34ae03aed1356e98ff28f6 1267 Gene3D G3DSA:1.25.40.10 753 774 1.0E-6 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS04195 3f3bfe86ea34ae03aed1356e98ff28f6 1267 SUPERFAMILY SSF48452 340 489 8.72E-5 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS04195 3f3bfe86ea34ae03aed1356e98ff28f6 1267 Pfam PF13429 Tetratricopeptide repeat 495 778 1.1E-60 T 19-04-2016 ALIDE2_RS04195 3f3bfe86ea34ae03aed1356e98ff28f6 1267 SUPERFAMILY SSF48452 347 385 7.59E-6 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS04195 3f3bfe86ea34ae03aed1356e98ff28f6 1267 SUPERFAMILY SSF48452 131 267 7.59E-6 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS04195 3f3bfe86ea34ae03aed1356e98ff28f6 1267 Pfam PF14559 Tetratricopeptide repeat 30 75 1.1E-5 T 19-04-2016 ALIDE2_RS04195 3f3bfe86ea34ae03aed1356e98ff28f6 1267 Gene3D G3DSA:1.25.40.10 427 489 1.6E-5 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS04195 3f3bfe86ea34ae03aed1356e98ff28f6 1267 Gene3D G3DSA:1.25.40.10 340 393 1.6E-5 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS12470 17e66eaf7b184d19a772a9f5bab6f0b5 232 SUPERFAMILY SSF89562 10 185 1.83E-18 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS12470 17e66eaf7b184d19a772a9f5bab6f0b5 232 Pfam PF03737 Demethylmenaquinone methyltransferase 16 184 5.2E-16 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS12470 17e66eaf7b184d19a772a9f5bab6f0b5 232 Gene3D G3DSA:3.50.30.40 13 190 2.4E-23 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 20 877 29.167 T 19-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 Gene3D G3DSA:3.90.199.10 51 233 2.4E-86 T 19-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 SMART SM00434 28 524 4.3E-287 T 19-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 PANTHER PTHR10169:SF48 475 843 0.0 T 19-04-2016 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 PANTHER PTHR10169:SF48 22 431 0.0 T 19-04-2016 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 SUPERFAMILY SSF101904 562 880 1.83E-109 T 19-04-2016 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 27 874 0.0 T 19-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 Gene3D G3DSA:1.10.268.10 380 521 5.2E-49 T 19-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 Gene3D G3DSA:2.120.10.90 560 873 4.0E-134 T 19-04-2016 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 Gene3D G3DSA:3.30.1360.40 253 350 2.1E-38 T 19-04-2016 IPR024946 Arginine repressor C-terminal-like domain ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 678 721 4.1E-7 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 726 771 3.6E-15 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 617 660 7.3E-9 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 777 823 1.3E-11 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 567 612 1.6E-9 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 827 871 9.0E-12 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 SUPERFAMILY SSF56719 47 542 6.67E-178 T 19-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 PANTHER PTHR10169 475 843 0.0 T 19-04-2016 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 PANTHER PTHR10169 22 431 0.0 T 19-04-2016 ALIDE2_RS09900 4ee9801b42e2d0de3b8d96d6eece5ac1 896 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 49 529 7.8E-155 T 19-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ALIDE2_RS23395 a3f2ad71de03497853540a4757461e59 192 Pfam PF01169 Uncharacterized protein family UPF0016 105 179 1.8E-23 T 19-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 ALIDE2_RS23395 a3f2ad71de03497853540a4757461e59 192 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 5.8E-20 T 19-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 ALIDE2_RS23395 a3f2ad71de03497853540a4757461e59 192 PANTHER PTHR12608 1 190 2.4E-34 T 19-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 ALIDE2_RS07860 3473c8d3e12af1eb8e0c24fb62d752a9 241 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 7 238 1.8E-68 T 19-04-2016 IPR014147 Type IV conjugative transfer protein TrbJ ALIDE2_RS07860 3473c8d3e12af1eb8e0c24fb62d752a9 241 Pfam PF13605 Domain of unknown function (DUF4141) 5 36 1.3E-9 T 19-04-2016 IPR025415 Protein of unknown function DUF4141 ALIDE2_RS01895 caf0826a31573bd3b7e89f93c1fccdb6 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 5.4E-103 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 ALIDE2_RS01895 caf0826a31573bd3b7e89f93c1fccdb6 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.0E-33 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 ALIDE2_RS01895 caf0826a31573bd3b7e89f93c1fccdb6 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.0E-33 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 ALIDE2_RS01895 caf0826a31573bd3b7e89f93c1fccdb6 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.0E-33 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 ALIDE2_RS01895 caf0826a31573bd3b7e89f93c1fccdb6 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.0E-33 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 ALIDE2_RS01895 caf0826a31573bd3b7e89f93c1fccdb6 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 19-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site ALIDE2_RS01895 caf0826a31573bd3b7e89f93c1fccdb6 288 SUPERFAMILY SSF52943 4 288 1.96E-92 T 19-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain ALIDE2_RS01895 caf0826a31573bd3b7e89f93c1fccdb6 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 35.073 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 ALIDE2_RS01895 caf0826a31573bd3b7e89f93c1fccdb6 288 Gene3D G3DSA:3.40.1380.10 65 192 2.5E-39 T 19-04-2016 ALIDE2_RS01895 caf0826a31573bd3b7e89f93c1fccdb6 288 Pfam PF00231 ATP synthase 5 287 6.5E-89 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 ALIDE2_RS01895 caf0826a31573bd3b7e89f93c1fccdb6 288 Gene3D G3DSA:1.10.287.80 237 283 2.0E-29 T 19-04-2016 ALIDE2_RS01895 caf0826a31573bd3b7e89f93c1fccdb6 288 Gene3D G3DSA:1.10.287.80 203 236 3.9E-41 T 19-04-2016 ALIDE2_RS01895 caf0826a31573bd3b7e89f93c1fccdb6 288 Gene3D G3DSA:1.10.287.80 19 60 3.9E-41 T 19-04-2016 ALIDE2_RS01895 caf0826a31573bd3b7e89f93c1fccdb6 288 PANTHER PTHR11693 1 288 3.9E-112 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 ALIDE2_RS11220 2dab9e6e681dcbd5dc52356d8be7ae65 233 PANTHER PTHR30625:SF3 3 233 6.3E-70 T 19-04-2016 ALIDE2_RS11220 2dab9e6e681dcbd5dc52356d8be7ae65 233 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 206 3.2E-40 T 19-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 ALIDE2_RS11220 2dab9e6e681dcbd5dc52356d8be7ae65 233 PANTHER PTHR30625 3 233 6.3E-70 T 19-04-2016 ALIDE2_RS11220 2dab9e6e681dcbd5dc52356d8be7ae65 233 TIGRFAM TIGR02796 tolQ: protein TolQ 7 221 6.2E-86 T 19-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 ALIDE2_RS22575 b3f0289d327a41f0a3b8fec196e5f841 357 Pfam PF02558 Ketopantoate reductase PanE/ApbA 9 153 1.3E-5 T 19-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 ALIDE2_RS22575 b3f0289d327a41f0a3b8fec196e5f841 357 Gene3D G3DSA:1.10.1040.10 194 344 5.0E-41 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ALIDE2_RS22575 b3f0289d327a41f0a3b8fec196e5f841 357 Pfam PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain 186 325 2.9E-32 T 19-04-2016 IPR003421 Opine dehydrogenase GO:0016491|GO:0050662|GO:0055114 ALIDE2_RS22575 b3f0289d327a41f0a3b8fec196e5f841 357 SUPERFAMILY SSF48179 186 356 1.26E-39 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS22575 b3f0289d327a41f0a3b8fec196e5f841 357 SUPERFAMILY SSF51735 7 151 2.67E-15 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS22575 b3f0289d327a41f0a3b8fec196e5f841 357 Gene3D G3DSA:3.40.50.720 7 181 3.4E-17 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS17365 679d70fedc1181256c5519c31a59cd84 313 PANTHER PTHR10366 19 311 8.9E-46 T 19-04-2016 ALIDE2_RS17365 679d70fedc1181256c5519c31a59cd84 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 26 239 1.9E-8 T 19-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 ALIDE2_RS17365 679d70fedc1181256c5519c31a59cd84 313 Gene3D G3DSA:3.40.50.720 24 312 6.5E-24 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS17365 679d70fedc1181256c5519c31a59cd84 313 PANTHER PTHR10366:SF430 19 311 8.9E-46 T 19-04-2016 ALIDE2_RS17365 679d70fedc1181256c5519c31a59cd84 313 SUPERFAMILY SSF51735 19 311 2.24E-35 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS23370 824380ec75b654d99bd836da1969a060 945 Gene3D G3DSA:3.40.1140.10 2 99 1.3E-26 T 19-04-2016 ALIDE2_RS23370 824380ec75b654d99bd836da1969a060 945 Gene3D G3DSA:3.40.1140.10 836 913 1.3E-26 T 19-04-2016 ALIDE2_RS23370 824380ec75b654d99bd836da1969a060 945 SUPERFAMILY SSF52540 177 233 1.46E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23370 824380ec75b654d99bd836da1969a060 945 SUPERFAMILY SSF52540 810 915 1.46E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23370 824380ec75b654d99bd836da1969a060 945 SUPERFAMILY SSF52540 4 111 1.46E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23370 824380ec75b654d99bd836da1969a060 945 Pfam PF13555 P-loop containing region of AAA domain 4 48 1.4E-10 T 19-04-2016 ALIDE2_RS23370 824380ec75b654d99bd836da1969a060 945 Gene3D G3DSA:3.40.50.300 115 136 7.4E-4 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS23370 824380ec75b654d99bd836da1969a060 945 Gene3D G3DSA:3.40.50.300 180 221 7.4E-4 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05895 239023678160cedd5303515d220300ff 86 SUPERFAMILY SSF54285 5 84 1.76E-18 T 19-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ALIDE2_RS05895 239023678160cedd5303515d220300ff 86 PANTHER PTHR33359 1 86 3.4E-18 T 19-04-2016 ALIDE2_RS05895 239023678160cedd5303515d220300ff 86 Gene3D G3DSA:3.10.20.30 5 86 3.3E-21 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS05895 239023678160cedd5303515d220300ff 86 Pfam PF02597 ThiS family 8 86 6.9E-16 T 19-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 ALIDE2_RS05895 239023678160cedd5303515d220300ff 86 PANTHER PTHR33359:SF1 1 86 3.4E-18 T 19-04-2016 ALIDE2_RS06325 4a584aff68e425350c6122cbbe639892 216 SUPERFAMILY SSF89069 12 79 6.28E-11 T 19-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 ALIDE2_RS06325 4a584aff68e425350c6122cbbe639892 216 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 13 96 1.3E-12 T 19-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 ALIDE2_RS18950 d0d93748a7d48da788c076aa9e07358d 393 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 22 379 7.5E-122 T 19-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 ALIDE2_RS18950 d0d93748a7d48da788c076aa9e07358d 393 PANTHER PTHR30474:SF1 1 385 1.0E-133 T 19-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 ALIDE2_RS18950 d0d93748a7d48da788c076aa9e07358d 393 PANTHER PTHR30474 1 385 1.0E-133 T 19-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 ALIDE2_RS18950 d0d93748a7d48da788c076aa9e07358d 393 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 337 361 - T 19-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 ALIDE2_RS18950 d0d93748a7d48da788c076aa9e07358d 393 Pfam PF01098 Cell cycle protein 26 379 5.0E-94 T 19-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 ALIDE2_RS20155 66b218294fdced74e7878098ead54c4a 104 Pfam PF04999 Cell division protein FtsL 3 84 4.0E-20 T 19-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 ALIDE2_RS20155 66b218294fdced74e7878098ead54c4a 104 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 3 84 1.3E-18 T 19-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 ALIDE2_RS20155 66b218294fdced74e7878098ead54c4a 104 PANTHER PTHR37479 3 87 5.2E-12 T 19-04-2016 ALIDE2_RS20155 66b218294fdced74e7878098ead54c4a 104 PANTHER PTHR37479:SF1 3 87 5.2E-12 T 19-04-2016 ALIDE2_RS20155 66b218294fdced74e7878098ead54c4a 104 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 14.161 T 19-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 ALIDE2_RS09135 5f5f50286f90b1a6f551097e8f568e9d 97 Gene3D G3DSA:1.10.260.40 34 79 2.4E-8 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS09135 5f5f50286f90b1a6f551097e8f568e9d 97 Pfam PF01381 Helix-turn-helix 35 78 8.6E-6 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS09135 5f5f50286f90b1a6f551097e8f568e9d 97 SUPERFAMILY SSF47413 34 81 1.71E-7 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS04480 c78b635f060999ffa958a15ef84e3928 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 103 8.2E-46 T 19-04-2016 IPR004480 Monothiol glutaredoxin-related ALIDE2_RS04480 c78b635f060999ffa958a15ef84e3928 110 Gene3D G3DSA:3.40.30.10 7 103 3.1E-35 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS04480 c78b635f060999ffa958a15ef84e3928 110 Pfam PF00462 Glutaredoxin 17 84 3.9E-18 T 19-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ALIDE2_RS04480 c78b635f060999ffa958a15ef84e3928 110 PANTHER PTHR10293 2 103 3.1E-63 T 19-04-2016 IPR004480 Monothiol glutaredoxin-related ALIDE2_RS04480 c78b635f060999ffa958a15ef84e3928 110 PIRSF PIRSF005894 1 110 3.1E-48 T 19-04-2016 IPR014434 Monothiol glutaredoxin ALIDE2_RS04480 c78b635f060999ffa958a15ef84e3928 110 SUPERFAMILY SSF52833 1 104 3.75E-34 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS01300 7c1f8e6e4f54351d23ebb37cb53ac519 221 SMART SM00342 134 216 1.2E-11 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS01300 7c1f8e6e4f54351d23ebb37cb53ac519 221 Gene3D G3DSA:1.10.10.60 127 173 1.6E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS01300 7c1f8e6e4f54351d23ebb37cb53ac519 221 SUPERFAMILY SSF51182 19 114 3.9E-12 T 19-04-2016 IPR011051 RmlC-like cupin domain ALIDE2_RS01300 7c1f8e6e4f54351d23ebb37cb53ac519 221 PANTHER PTHR11019 12 216 1.5E-15 T 19-04-2016 ALIDE2_RS01300 7c1f8e6e4f54351d23ebb37cb53ac519 221 Pfam PF07883 Cupin domain 17 66 1.9E-7 T 19-04-2016 IPR013096 Cupin 2, conserved barrel ALIDE2_RS01300 7c1f8e6e4f54351d23ebb37cb53ac519 221 Pfam PF12833 Helix-turn-helix domain 140 212 4.7E-12 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS01300 7c1f8e6e4f54351d23ebb37cb53ac519 221 Gene3D G3DSA:2.60.120.10 17 79 1.4E-12 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS01300 7c1f8e6e4f54351d23ebb37cb53ac519 221 PANTHER PTHR11019:SF39 12 216 1.5E-15 T 19-04-2016 ALIDE2_RS19940 5439b4d5ce12cd4146093afe4e4fea3b 491 Pfam PF00361 Proton-conducting membrane transporter 131 413 1.8E-78 T 19-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 ALIDE2_RS19940 5439b4d5ce12cd4146093afe4e4fea3b 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 235 259 1.4E-48 T 19-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 ALIDE2_RS19940 5439b4d5ce12cd4146093afe4e4fea3b 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 323 342 1.4E-48 T 19-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 ALIDE2_RS19940 5439b4d5ce12cd4146093afe4e4fea3b 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 375 401 1.4E-48 T 19-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 ALIDE2_RS19940 5439b4d5ce12cd4146093afe4e4fea3b 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 165 189 1.4E-48 T 19-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 ALIDE2_RS19940 5439b4d5ce12cd4146093afe4e4fea3b 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 135 154 1.4E-48 T 19-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 ALIDE2_RS19940 5439b4d5ce12cd4146093afe4e4fea3b 491 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 4 484 4.2E-181 T 19-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 ALIDE2_RS19940 5439b4d5ce12cd4146093afe4e4fea3b 491 PANTHER PTHR22773:SF40 1 485 1.5E-197 T 19-04-2016 ALIDE2_RS19940 5439b4d5ce12cd4146093afe4e4fea3b 491 PANTHER PTHR22773 1 485 1.5E-197 T 19-04-2016 ALIDE2_RS17200 3a43d402a9fe000a79d318bedd1b3c4a 240 PIRSF PIRSF005650 3 240 5.9E-89 T 19-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 ALIDE2_RS17200 3a43d402a9fe000a79d318bedd1b3c4a 240 SUPERFAMILY SSF53633 7 239 4.84E-71 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS17200 3a43d402a9fe000a79d318bedd1b3c4a 240 PANTHER PTHR21499 1 238 1.4E-107 T 19-04-2016 ALIDE2_RS17200 3a43d402a9fe000a79d318bedd1b3c4a 240 PANTHER PTHR21499:SF23 1 238 1.4E-107 T 19-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 ALIDE2_RS17200 3a43d402a9fe000a79d318bedd1b3c4a 240 Gene3D G3DSA:3.40.1160.10 3 239 7.4E-85 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS17200 3a43d402a9fe000a79d318bedd1b3c4a 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 6 239 44.03 T 19-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 ALIDE2_RS17200 3a43d402a9fe000a79d318bedd1b3c4a 240 Pfam PF00696 Amino acid kinase family 9 218 1.5E-30 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 ALIDE2_RS17200 3a43d402a9fe000a79d318bedd1b3c4a 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 238 7.9E-98 T 19-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 ALIDE2_RS03215 e4561fd26bde06f22647f069e4ab0904 432 PANTHER PTHR33362 1 427 2.4E-95 T 19-04-2016 ALIDE2_RS03215 e4561fd26bde06f22647f069e4ab0904 432 PANTHER PTHR33362:SF2 1 427 2.4E-95 T 19-04-2016 ALIDE2_RS03215 e4561fd26bde06f22647f069e4ab0904 432 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 422 2.6E-92 T 19-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit ALIDE2_RS03215 e4561fd26bde06f22647f069e4ab0904 432 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 427 1.0E-99 T 19-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 ALIDE2_RS03215 e4561fd26bde06f22647f069e4ab0904 432 PIRSF PIRSF006066 1 432 1.2E-116 T 19-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 ALIDE2_RS10930 b5d03e90908f1efcca66708d9b27044d 167 SUPERFAMILY SSF46626 35 150 1.07E-19 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS10930 b5d03e90908f1efcca66708d9b27044d 167 PANTHER PTHR35008 42 158 2.0E-17 T 19-04-2016 ALIDE2_RS10930 b5d03e90908f1efcca66708d9b27044d 167 Gene3D G3DSA:1.10.760.10 43 155 3.4E-17 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS10930 b5d03e90908f1efcca66708d9b27044d 167 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 49 141 5.1E-10 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS04795 a00a4e33cc96bbdb3e50974eb265a3f4 420 Gene3D G3DSA:1.20.1600.10 33 400 2.1E-21 T 19-04-2016 ALIDE2_RS04795 a00a4e33cc96bbdb3e50974eb265a3f4 420 Pfam PF02321 Outer membrane efflux protein 233 399 7.3E-8 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS04795 a00a4e33cc96bbdb3e50974eb265a3f4 420 SUPERFAMILY SSF56954 2 401 4.84E-31 T 19-04-2016 ALIDE2_RS09305 d91dac7b8f69b30541c4aa62320a00f7 407 PANTHER PTHR24023 28 390 8.7E-34 T 19-04-2016 ALIDE2_RS09305 d91dac7b8f69b30541c4aa62320a00f7 407 Gene3D G3DSA:3.30.1540.10 229 311 3.0E-32 T 19-04-2016 ALIDE2_RS09305 d91dac7b8f69b30541c4aa62320a00f7 407 Pfam PF02515 CoA-transferase family III 1 379 3.3E-132 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS09305 d91dac7b8f69b30541c4aa62320a00f7 407 PANTHER PTHR24023:SF593 28 390 8.7E-34 T 19-04-2016 ALIDE2_RS09305 d91dac7b8f69b30541c4aa62320a00f7 407 Gene3D G3DSA:3.40.50.10540 1 223 1.4E-119 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS09305 d91dac7b8f69b30541c4aa62320a00f7 407 Gene3D G3DSA:3.40.50.10540 312 404 1.4E-119 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS09305 d91dac7b8f69b30541c4aa62320a00f7 407 SUPERFAMILY SSF89796 1 403 1.57E-143 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS06795 45c38d3199cee15d8194ee6afd481537 287 PANTHER PTHR30168 2 287 2.9E-126 T 19-04-2016 ALIDE2_RS06795 45c38d3199cee15d8194ee6afd481537 287 SUPERFAMILY SSF55486 88 133 3.35E-5 T 19-04-2016 ALIDE2_RS06795 45c38d3199cee15d8194ee6afd481537 287 SUPERFAMILY SSF55486 161 224 3.35E-5 T 19-04-2016 ALIDE2_RS06795 45c38d3199cee15d8194ee6afd481537 287 Pfam PF04228 Putative neutral zinc metallopeptidase 1 282 7.5E-118 T 19-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative ALIDE2_RS09400 7320ddf29188d323f71f9a6ec048c795 127 SUPERFAMILY SSF50249 2 117 1.17E-24 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS09400 7320ddf29188d323f71f9a6ec048c795 127 PIRSF PIRSF002070 1 126 3.5E-17 T 19-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 ALIDE2_RS09400 7320ddf29188d323f71f9a6ec048c795 127 Pfam PF00436 Single-strand binding protein family 8 109 6.2E-13 T 19-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 ALIDE2_RS09400 7320ddf29188d323f71f9a6ec048c795 127 Gene3D G3DSA:2.40.50.140 4 113 4.2E-22 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS16835 c168c7204d730a4ec3c8633a750b73a9 433 SUPERFAMILY SSF56954 13 424 9.42E-71 T 19-04-2016 ALIDE2_RS16835 c168c7204d730a4ec3c8633a750b73a9 433 Gene3D G3DSA:1.20.1600.10 37 424 3.6E-55 T 19-04-2016 ALIDE2_RS16835 c168c7204d730a4ec3c8633a750b73a9 433 PANTHER PTHR30203 30 423 3.7E-49 T 19-04-2016 ALIDE2_RS16835 c168c7204d730a4ec3c8633a750b73a9 433 Pfam PF02321 Outer membrane efflux protein 257 422 1.7E-16 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS16835 c168c7204d730a4ec3c8633a750b73a9 433 Pfam PF02321 Outer membrane efflux protein 51 223 5.8E-22 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS16835 c168c7204d730a4ec3c8633a750b73a9 433 PANTHER PTHR30203:SF1 30 423 3.7E-49 T 19-04-2016 ALIDE2_RS11405 22d05ab80e4352170182d74f326a344e 220 PANTHER PTHR10655 18 214 4.3E-23 T 19-04-2016 ALIDE2_RS11405 22d05ab80e4352170182d74f326a344e 220 Pfam PF02230 Phospholipase/Carboxylesterase 17 211 5.5E-18 T 19-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 ALIDE2_RS11405 22d05ab80e4352170182d74f326a344e 220 SUPERFAMILY SSF53474 18 214 1.11E-38 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS11405 22d05ab80e4352170182d74f326a344e 220 Gene3D G3DSA:3.40.50.1820 6 216 9.2E-46 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS10340 dbaa6e60d45a8d7f04816c4c2e74fbee 92 SUPERFAMILY SSF47413 1 65 5.38E-11 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS10340 dbaa6e60d45a8d7f04816c4c2e74fbee 92 Pfam PF12844 Helix-turn-helix domain 4 60 4.6E-10 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS10340 dbaa6e60d45a8d7f04816c4c2e74fbee 92 SMART SM00530 6 62 1.4E-7 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS10340 dbaa6e60d45a8d7f04816c4c2e74fbee 92 Gene3D G3DSA:1.10.260.40 3 85 5.4E-14 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS14955 893bceec5054ab6dec9f3da8404dc471 306 Gene3D G3DSA:3.40.190.10 91 172 2.1E-25 T 19-04-2016 ALIDE2_RS14955 893bceec5054ab6dec9f3da8404dc471 306 PANTHER PTHR30346 1 293 1.4E-82 T 19-04-2016 ALIDE2_RS14955 893bceec5054ab6dec9f3da8404dc471 306 Gene3D G3DSA:3.40.190.10 173 266 5.1E-31 T 19-04-2016 ALIDE2_RS14955 893bceec5054ab6dec9f3da8404dc471 306 SUPERFAMILY SSF53850 90 294 2.58E-31 T 19-04-2016 ALIDE2_RS14955 893bceec5054ab6dec9f3da8404dc471 306 SUPERFAMILY SSF46785 1 87 7.32E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14955 893bceec5054ab6dec9f3da8404dc471 306 Gene3D G3DSA:1.10.10.10 1 85 7.3E-34 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14955 893bceec5054ab6dec9f3da8404dc471 306 Pfam PF03466 LysR substrate binding domain 89 288 5.1E-35 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS14955 893bceec5054ab6dec9f3da8404dc471 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.0E-11 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS14955 893bceec5054ab6dec9f3da8404dc471 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.0E-11 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS14955 893bceec5054ab6dec9f3da8404dc471 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.0E-11 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS14955 893bceec5054ab6dec9f3da8404dc471 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.8E-25 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS13945 cccb023eccb898b13614283e4b4b83a5 860 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 35 855 2.1E-280 T 19-04-2016 IPR014117 Type-IV secretion system protein TraC ALIDE2_RS13945 cccb023eccb898b13614283e4b4b83a5 860 Gene3D G3DSA:3.40.50.300 479 558 6.4E-16 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13945 cccb023eccb898b13614283e4b4b83a5 860 Gene3D G3DSA:3.40.50.300 645 769 6.4E-16 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13945 cccb023eccb898b13614283e4b4b83a5 860 SUPERFAMILY SSF52540 435 775 1.25E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13945 cccb023eccb898b13614283e4b4b83a5 860 PANTHER PTHR38467 150 856 2.5E-13 T 19-04-2016 ALIDE2_RS13945 cccb023eccb898b13614283e4b4b83a5 860 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 31 286 2.6E-59 T 19-04-2016 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase ALIDE2_RS13430 49fe6775beb48bdebc9d38f12dbf01ac 585 Pfam PF13245 Part of AAA domain 26 98 1.5E-7 T 19-04-2016 ALIDE2_RS13430 49fe6775beb48bdebc9d38f12dbf01ac 585 Pfam PF00580 UvrD/REP helicase N-terminal domain 160 229 2.5E-7 T 19-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 ALIDE2_RS13430 49fe6775beb48bdebc9d38f12dbf01ac 585 Gene3D G3DSA:3.40.50.300 24 114 2.3E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13430 49fe6775beb48bdebc9d38f12dbf01ac 585 Gene3D G3DSA:3.40.50.300 158 230 2.3E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13430 49fe6775beb48bdebc9d38f12dbf01ac 585 Gene3D G3DSA:3.40.50.300 475 567 8.6E-10 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13430 49fe6775beb48bdebc9d38f12dbf01ac 585 SUPERFAMILY SSF52540 23 279 7.88E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13430 49fe6775beb48bdebc9d38f12dbf01ac 585 SUPERFAMILY SSF52540 311 455 7.88E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13430 49fe6775beb48bdebc9d38f12dbf01ac 585 SUPERFAMILY SSF52540 490 564 7.88E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02230 e7473ab7d55d18e2572eda210082aa41 221 PANTHER PTHR34606 1 202 1.9E-47 T 19-04-2016 ALIDE2_RS02230 e7473ab7d55d18e2572eda210082aa41 221 Pfam PF04972 BON domain 61 117 1.3E-14 T 19-04-2016 IPR007055 BON domain ALIDE2_RS02230 e7473ab7d55d18e2572eda210082aa41 221 Pfam PF04972 BON domain 129 193 2.8E-11 T 19-04-2016 IPR007055 BON domain ALIDE2_RS02230 e7473ab7d55d18e2572eda210082aa41 221 SMART SM00749 55 118 0.72 T 19-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria ALIDE2_RS02230 e7473ab7d55d18e2572eda210082aa41 221 SMART SM00749 133 196 1.0E-8 T 19-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria ALIDE2_RS02230 e7473ab7d55d18e2572eda210082aa41 221 PANTHER PTHR34606:SF4 1 202 1.9E-47 T 19-04-2016 ALIDE2_RS18635 5d6b1e0739acb22118e5ab3c101eabec 198 SMART SM00852 14 159 2.0E-25 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS18635 5d6b1e0739acb22118e5ab3c101eabec 198 PANTHER PTHR10192 5 193 3.2E-83 T 19-04-2016 ALIDE2_RS18635 5d6b1e0739acb22118e5ab3c101eabec 198 Pfam PF00994 Probable molybdopterin binding domain 14 153 1.3E-30 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS18635 5d6b1e0739acb22118e5ab3c101eabec 198 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 11 153 1.1E-39 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS18635 5d6b1e0739acb22118e5ab3c101eabec 198 SUPERFAMILY SSF53218 10 195 1.96E-48 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS18635 5d6b1e0739acb22118e5ab3c101eabec 198 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 75 88 - T 19-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 ALIDE2_RS18635 5d6b1e0739acb22118e5ab3c101eabec 198 Gene3D G3DSA:3.40.980.10 10 195 3.9E-51 T 19-04-2016 IPR001453 MoaB/Mog domain ALIDE2_RS14945 9a3af92c0b083fe47a120aeb80de5e68 307 PANTHER PTHR30547:SF5 143 307 1.7E-123 T 19-04-2016 ALIDE2_RS14945 9a3af92c0b083fe47a120aeb80de5e68 307 Pfam PF06250 Protein of unknown function (DUF1016) 25 307 6.3E-92 T 19-04-2016 IPR009362 Protein of unknown function DUF1016 ALIDE2_RS14945 9a3af92c0b083fe47a120aeb80de5e68 307 PANTHER PTHR30547 143 307 1.7E-123 T 19-04-2016 ALIDE2_RS14945 9a3af92c0b083fe47a120aeb80de5e68 307 PANTHER PTHR30547 4 115 1.7E-123 T 19-04-2016 ALIDE2_RS14945 9a3af92c0b083fe47a120aeb80de5e68 307 PANTHER PTHR30547:SF5 4 115 1.7E-123 T 19-04-2016 ALIDE2_RS02665 89f40058b175bb468b9ef417ac6337ac 248 PANTHER PTHR30269:SF10 1 245 2.9E-74 T 19-04-2016 ALIDE2_RS02665 89f40058b175bb468b9ef417ac6337ac 248 Pfam PF01925 Sulfite exporter TauE/SafE 8 241 9.5E-32 T 19-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 ALIDE2_RS02665 89f40058b175bb468b9ef417ac6337ac 248 PANTHER PTHR30269 1 245 2.9E-74 T 19-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 ALIDE2_RS07175 b785fcd94251c6ba9c544fb3bf157e32 258 PANTHER PTHR22748:SF7 1 257 1.0E-104 T 19-04-2016 ALIDE2_RS07175 b785fcd94251c6ba9c544fb3bf157e32 258 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 214 225 - T 19-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 ALIDE2_RS07175 b785fcd94251c6ba9c544fb3bf157e32 258 PANTHER PTHR22748 1 257 1.0E-104 T 19-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 ALIDE2_RS07175 b785fcd94251c6ba9c544fb3bf157e32 258 Gene3D G3DSA:3.60.10.10 1 257 1.8E-81 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase ALIDE2_RS07175 b785fcd94251c6ba9c544fb3bf157e32 258 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 257 2.8E-76 T 19-04-2016 ALIDE2_RS07175 b785fcd94251c6ba9c544fb3bf157e32 258 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 250 1.9E-27 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase ALIDE2_RS07175 b785fcd94251c6ba9c544fb3bf157e32 258 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 257 9.8E-74 T 19-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 ALIDE2_RS07175 b785fcd94251c6ba9c544fb3bf157e32 258 SUPERFAMILY SSF56219 1 257 7.46E-81 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase ALIDE2_RS18775 9cdad52ded67cbd0d89c5662591e1c5c 374 Pfam PF08007 Cupin superfamily protein 15 285 8.0E-85 T 19-04-2016 IPR003347 JmjC domain ALIDE2_RS18775 9cdad52ded67cbd0d89c5662591e1c5c 374 PANTHER PTHR13096 9 210 6.8E-39 T 19-04-2016 ALIDE2_RS18775 9cdad52ded67cbd0d89c5662591e1c5c 374 SMART SM00558 100 222 2.3E-4 T 19-04-2016 IPR003347 JmjC domain ALIDE2_RS18775 9cdad52ded67cbd0d89c5662591e1c5c 374 Gene3D G3DSA:2.60.120.650 9 212 1.1E-42 T 19-04-2016 ALIDE2_RS18775 9cdad52ded67cbd0d89c5662591e1c5c 374 SUPERFAMILY SSF51197 7 293 1.1E-73 T 19-04-2016 ALIDE2_RS12660 7667f612fb18904c5519ad3114dfa17d 355 Gene3D G3DSA:3.60.15.10 25 294 1.1E-54 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS12660 7667f612fb18904c5519ad3114dfa17d 355 PANTHER PTHR11935:SF109 30 121 3.5E-44 T 19-04-2016 ALIDE2_RS12660 7667f612fb18904c5519ad3114dfa17d 355 PANTHER PTHR11935:SF109 154 295 3.5E-44 T 19-04-2016 ALIDE2_RS12660 7667f612fb18904c5519ad3114dfa17d 355 SUPERFAMILY SSF56281 13 351 7.86E-75 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS12660 7667f612fb18904c5519ad3114dfa17d 355 SMART SM00849 48 264 3.3E-30 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS12660 7667f612fb18904c5519ad3114dfa17d 355 PANTHER PTHR11935 30 121 3.5E-44 T 19-04-2016 ALIDE2_RS12660 7667f612fb18904c5519ad3114dfa17d 355 PANTHER PTHR11935 154 295 3.5E-44 T 19-04-2016 ALIDE2_RS12660 7667f612fb18904c5519ad3114dfa17d 355 Pfam PF00753 Metallo-beta-lactamase superfamily 47 260 2.6E-28 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS21530 b6f5ce6ea7432d4e92da6e15b7251ebd 459 SUPERFAMILY SSF53098 129 370 1.21E-23 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS21530 b6f5ce6ea7432d4e92da6e15b7251ebd 459 PANTHER PTHR37529 15 458 1.5E-18 T 19-04-2016 ALIDE2_RS21530 b6f5ce6ea7432d4e92da6e15b7251ebd 459 Pfam PF01609 Transposase DDE domain 133 361 3.8E-13 T 19-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS09105 0f31c63644ec80833aa7d2b8c24e8da5 203 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 29 104 7.2E-21 T 19-04-2016 IPR025159 Transcriptional regulator, AbiEi antitoxin ALIDE2_RS21510 a9ebb0e5ee1b50ac3eb5be8e80dd7e65 511 ProSitePatterns PS00211 ABC transporters family signature. 412 426 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS21510 a9ebb0e5ee1b50ac3eb5be8e80dd7e65 511 SUPERFAMILY SSF52540 18 245 2.88E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21510 a9ebb0e5ee1b50ac3eb5be8e80dd7e65 511 PANTHER PTHR24220 21 394 5.9E-151 T 19-04-2016 ALIDE2_RS21510 a9ebb0e5ee1b50ac3eb5be8e80dd7e65 511 SUPERFAMILY SSF52540 283 500 1.11E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21510 a9ebb0e5ee1b50ac3eb5be8e80dd7e65 511 Gene3D G3DSA:3.40.50.300 17 248 5.2E-60 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21510 a9ebb0e5ee1b50ac3eb5be8e80dd7e65 511 PANTHER PTHR24220:SF308 21 394 5.9E-151 T 19-04-2016 ALIDE2_RS21510 a9ebb0e5ee1b50ac3eb5be8e80dd7e65 511 Gene3D G3DSA:3.40.50.300 269 503 2.3E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21510 a9ebb0e5ee1b50ac3eb5be8e80dd7e65 511 SMART SM00382 44 264 2.9E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS21510 a9ebb0e5ee1b50ac3eb5be8e80dd7e65 511 SMART SM00382 295 495 0.26 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS21510 a9ebb0e5ee1b50ac3eb5be8e80dd7e65 511 Pfam PF00005 ABC transporter 35 186 2.2E-28 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS21510 a9ebb0e5ee1b50ac3eb5be8e80dd7e65 511 Pfam PF00005 ABC transporter 287 439 3.3E-16 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS20580 d15e02e8a43c80141f5fcede9db05d2b 604 Pfam PF02653 Branched-chain amino acid transport system / permease component 33 292 4.1E-39 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS20580 d15e02e8a43c80141f5fcede9db05d2b 604 PANTHER PTHR24220 341 587 1.0E-114 T 19-04-2016 ALIDE2_RS20580 d15e02e8a43c80141f5fcede9db05d2b 604 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 562 584 5.8E-12 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALIDE2_RS20580 d15e02e8a43c80141f5fcede9db05d2b 604 PANTHER PTHR24220:SF358 341 587 1.0E-114 T 19-04-2016 ALIDE2_RS20580 d15e02e8a43c80141f5fcede9db05d2b 604 Pfam PF00005 ABC transporter 356 513 3.6E-30 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS20580 d15e02e8a43c80141f5fcede9db05d2b 604 Gene3D G3DSA:3.40.50.300 337 583 2.9E-65 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20580 d15e02e8a43c80141f5fcede9db05d2b 604 SMART SM00382 364 561 1.2E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS20580 d15e02e8a43c80141f5fcede9db05d2b 604 SUPERFAMILY SSF52540 338 584 4.65E-65 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16035 3ac7d7b16ef99013a0b1ee00a0ea806c 236 Gene3D G3DSA:3.40.50.150 22 233 2.3E-49 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS16035 3ac7d7b16ef99013a0b1ee00a0ea806c 236 SUPERFAMILY SSF53335 15 200 3.95E-42 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS16035 3ac7d7b16ef99013a0b1ee00a0ea806c 236 PANTHER PTHR11579 9 190 1.1E-31 T 19-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 ALIDE2_RS16035 3ac7d7b16ef99013a0b1ee00a0ea806c 236 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 22 201 3.9E-29 T 19-04-2016 ALIDE2_RS16035 3ac7d7b16ef99013a0b1ee00a0ea806c 236 SMART SM00650 85 229 0.0024 T 19-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 ALIDE2_RS16035 3ac7d7b16ef99013a0b1ee00a0ea806c 236 PANTHER PTHR11579:SF0 9 190 1.1E-31 T 19-04-2016 ALIDE2_RS19560 547170241708268ef9a6e61b9c9f80df 212 PANTHER PTHR30086 1 211 1.2E-63 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 ALIDE2_RS19560 547170241708268ef9a6e61b9c9f80df 212 PIRSF PIRSF006324 1 207 3.0E-46 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 ALIDE2_RS19560 547170241708268ef9a6e61b9c9f80df 212 Pfam PF01810 LysE type translocator 16 202 1.1E-28 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 ALIDE2_RS19560 547170241708268ef9a6e61b9c9f80df 212 PANTHER PTHR30086:SF14 1 211 1.2E-63 T 19-04-2016 ALIDE2_RS05780 b76d411635592d3e121c6db86483d553 385 Pfam PF02803 Thiolase, C-terminal domain 258 368 1.5E-5 T 19-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ALIDE2_RS05780 b76d411635592d3e121c6db86483d553 385 PIRSF PIRSF000429 4 380 3.2E-29 T 19-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ALIDE2_RS05780 b76d411635592d3e121c6db86483d553 385 PANTHER PTHR18919:SF108 5 383 6.8E-130 T 19-04-2016 ALIDE2_RS05780 b76d411635592d3e121c6db86483d553 385 PANTHER PTHR18919 5 383 6.8E-130 T 19-04-2016 ALIDE2_RS05780 b76d411635592d3e121c6db86483d553 385 Gene3D G3DSA:3.40.47.10 196 223 3.2E-13 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05780 b76d411635592d3e121c6db86483d553 385 Gene3D G3DSA:3.40.47.10 23 117 3.2E-13 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05780 b76d411635592d3e121c6db86483d553 385 SUPERFAMILY SSF53901 244 371 1.97E-25 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05780 b76d411635592d3e121c6db86483d553 385 Gene3D G3DSA:3.40.47.10 145 181 3.9E-18 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05780 b76d411635592d3e121c6db86483d553 385 Gene3D G3DSA:3.40.47.10 241 368 3.9E-18 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS05780 b76d411635592d3e121c6db86483d553 385 SUPERFAMILY SSF53901 9 226 1.3E-23 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ALIDE2_RS18515 0ef3ea67045a0cc0b5def5a941279f63 276 Gene3D G3DSA:3.40.50.720 2 271 9.6E-53 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS18515 0ef3ea67045a0cc0b5def5a941279f63 276 PANTHER PTHR24319:SF23 1 270 4.0E-50 T 19-04-2016 ALIDE2_RS18515 0ef3ea67045a0cc0b5def5a941279f63 276 PANTHER PTHR24319 1 270 4.0E-50 T 19-04-2016 ALIDE2_RS18515 0ef3ea67045a0cc0b5def5a941279f63 276 SUPERFAMILY SSF51735 7 271 2.71E-53 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS18515 0ef3ea67045a0cc0b5def5a941279f63 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 5.5E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS18515 0ef3ea67045a0cc0b5def5a941279f63 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 5.5E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS18515 0ef3ea67045a0cc0b5def5a941279f63 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 235 255 5.5E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS18515 0ef3ea67045a0cc0b5def5a941279f63 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.5E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS18515 0ef3ea67045a0cc0b5def5a941279f63 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 5.5E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS18515 0ef3ea67045a0cc0b5def5a941279f63 276 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 270 2.7E-32 T 19-04-2016 ALIDE2_RS19485 e5fd781d40818f1c7b453f67fca9259d 241 Gene3D G3DSA:3.40.50.720 10 236 1.3E-65 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS19485 e5fd781d40818f1c7b453f67fca9259d 241 SUPERFAMILY SSF51735 9 236 1.36E-64 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS19485 e5fd781d40818f1c7b453f67fca9259d 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS19485 e5fd781d40818f1c7b453f67fca9259d 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 1.3E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS19485 e5fd781d40818f1c7b453f67fca9259d 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 160 1.3E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS19485 e5fd781d40818f1c7b453f67fca9259d 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 1.3E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS19485 e5fd781d40818f1c7b453f67fca9259d 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 235 1.6E-46 T 19-04-2016 ALIDE2_RS19485 e5fd781d40818f1c7b453f67fca9259d 241 PANTHER PTHR24322 12 173 5.4E-39 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS19485 e5fd781d40818f1c7b453f67fca9259d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.3E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS19485 e5fd781d40818f1c7b453f67fca9259d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 6.3E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS19485 e5fd781d40818f1c7b453f67fca9259d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 218 6.3E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS19485 e5fd781d40818f1c7b453f67fca9259d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 6.3E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS19485 e5fd781d40818f1c7b453f67fca9259d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 6.3E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS19485 e5fd781d40818f1c7b453f67fca9259d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 6.3E-38 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS22690 9f609e067362697656375e2cbac5ea36 1205 Gene3D G3DSA:3.40.50.970 125 203 3.5E-4 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS22690 9f609e067362697656375e2cbac5ea36 1205 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 483 584 4.0E-7 T 19-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ALIDE2_RS22690 9f609e067362697656375e2cbac5ea36 1205 SUPERFAMILY SSF52518 29 205 2.5E-19 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS22690 9f609e067362697656375e2cbac5ea36 1205 SUPERFAMILY SSF52518 606 668 2.36E-15 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS22690 9f609e067362697656375e2cbac5ea36 1205 SUPERFAMILY SSF52518 463 572 2.36E-15 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS22690 9f609e067362697656375e2cbac5ea36 1205 Gene3D G3DSA:3.40.920.10 770 969 5.7E-15 T 19-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 ALIDE2_RS22690 9f609e067362697656375e2cbac5ea36 1205 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 776 963 4.2E-20 T 19-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 ALIDE2_RS22690 9f609e067362697656375e2cbac5ea36 1205 Gene3D G3DSA:3.40.50.970 459 591 4.8E-15 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS22690 9f609e067362697656375e2cbac5ea36 1205 Gene3D G3DSA:3.40.50.970 627 712 4.8E-15 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold ALIDE2_RS22690 9f609e067362697656375e2cbac5ea36 1205 PANTHER PTHR18968 254 607 2.0E-173 T 19-04-2016 ALIDE2_RS22690 9f609e067362697656375e2cbac5ea36 1205 PANTHER PTHR18968 624 804 2.0E-173 T 19-04-2016 ALIDE2_RS22690 9f609e067362697656375e2cbac5ea36 1205 SUPERFAMILY SSF53323 768 1019 6.02E-33 T 19-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 ALIDE2_RS22690 9f609e067362697656375e2cbac5ea36 1205 PANTHER PTHR18968:SF134 254 607 2.0E-173 T 19-04-2016 ALIDE2_RS22690 9f609e067362697656375e2cbac5ea36 1205 PANTHER PTHR18968:SF134 624 804 2.0E-173 T 19-04-2016 ALIDE2_RS06850 dc49a0ed63f396333a3b2012e267c36c 346 SUPERFAMILY SSF143631 40 339 3.79E-77 T 19-04-2016 IPR003374 ApbE-like domain ALIDE2_RS06850 dc49a0ed63f396333a3b2012e267c36c 346 Pfam PF02424 ApbE family 46 322 8.2E-64 T 19-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 ALIDE2_RS06850 dc49a0ed63f396333a3b2012e267c36c 346 PIRSF PIRSF006268 11 342 3.5E-66 T 19-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 ALIDE2_RS06850 dc49a0ed63f396333a3b2012e267c36c 346 PANTHER PTHR30040:SF2 6 345 1.4E-73 T 19-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 ALIDE2_RS06850 dc49a0ed63f396333a3b2012e267c36c 346 PANTHER PTHR30040 6 345 1.4E-73 T 19-04-2016 ALIDE2_RS12145 0d59d74a203fe152a69ddf596423db72 83 PANTHER PTHR33884:SF1 1 81 5.4E-26 T 19-04-2016 ALIDE2_RS12145 0d59d74a203fe152a69ddf596423db72 83 PANTHER PTHR33884 1 81 5.4E-26 T 19-04-2016 ALIDE2_RS12145 0d59d74a203fe152a69ddf596423db72 83 Pfam PF04226 Transglycosylase associated protein 34 81 4.1E-15 T 19-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 ALIDE2_RS19360 2a34afd71d6d73c098c9e24a171dd8c9 527 Pfam PF12838 4Fe-4S dicluster domain 314 364 5.5E-7 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALIDE2_RS19360 2a34afd71d6d73c098c9e24a171dd8c9 527 Gene3D G3DSA:1.20.810.10 29 380 2.5E-41 T 19-04-2016 IPR027387 Cytochrome b/b6-like domain ALIDE2_RS19360 2a34afd71d6d73c098c9e24a171dd8c9 527 Pfam PF02662 Methyl-viologen-reducing hydrogenase, delta subunit 414 512 1.7E-12 T 19-04-2016 IPR003813 Methyl-viologen-reducing hydrogenase, delta subunit GO:0015948|GO:0055114 ALIDE2_RS19360 2a34afd71d6d73c098c9e24a171dd8c9 527 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 315 326 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS19360 2a34afd71d6d73c098c9e24a171dd8c9 527 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 352 363 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALIDE2_RS19360 2a34afd71d6d73c098c9e24a171dd8c9 527 SUPERFAMILY SSF81342 30 222 1.21E-28 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 ALIDE2_RS19360 2a34afd71d6d73c098c9e24a171dd8c9 527 Pfam PF00033 Cytochrome b/b6/petB 47 215 9.5E-16 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 ALIDE2_RS19360 2a34afd71d6d73c098c9e24a171dd8c9 527 SUPERFAMILY SSF54862 300 364 3.84E-14 T 19-04-2016 ALIDE2_RS23475 8cb0595235f8686b3a7959da027f68d0 272 Pfam PF04951 D-aminopeptidase 1 262 3.2E-94 T 19-04-2016 IPR007035 Peptidase M55, D-aminopeptidase ALIDE2_RS23475 8cb0595235f8686b3a7959da027f68d0 272 Gene3D G3DSA:3.40.50.10780 1 212 3.2E-75 T 19-04-2016 IPR027476 D-aminopeptidase, N-terminal ALIDE2_RS23475 8cb0595235f8686b3a7959da027f68d0 272 SUPERFAMILY SSF63992 1 271 6.28E-95 T 19-04-2016 IPR007035 Peptidase M55, D-aminopeptidase ALIDE2_RS23475 8cb0595235f8686b3a7959da027f68d0 272 PIRSF PIRSF015853 1 272 1.2E-93 T 19-04-2016 IPR007035 Peptidase M55, D-aminopeptidase ALIDE2_RS22990 5e5ada26e3d9e443f6293db8fec0a673 325 SUPERFAMILY SSF53850 114 295 5.65E-14 T 19-04-2016 ALIDE2_RS22990 5e5ada26e3d9e443f6293db8fec0a673 325 PANTHER PTHR30349:SF32 17 287 6.1E-78 T 19-04-2016 ALIDE2_RS22990 5e5ada26e3d9e443f6293db8fec0a673 325 PANTHER PTHR30349 17 287 6.1E-78 T 19-04-2016 ALIDE2_RS22990 5e5ada26e3d9e443f6293db8fec0a673 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 321 2.2E-78 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS22990 5e5ada26e3d9e443f6293db8fec0a673 325 PIRSF PIRSF017082 1 325 1.4E-72 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00915 d63a4cb7c7a76fee1fe1813dce038123 326 PANTHER PTHR30349:SF16 1 326 9.2E-82 T 19-04-2016 ALIDE2_RS00915 d63a4cb7c7a76fee1fe1813dce038123 326 PANTHER PTHR30349 1 326 9.2E-82 T 19-04-2016 ALIDE2_RS00915 d63a4cb7c7a76fee1fe1813dce038123 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 322 2.2E-85 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00915 d63a4cb7c7a76fee1fe1813dce038123 326 SUPERFAMILY SSF53850 129 294 2.99E-7 T 19-04-2016 ALIDE2_RS00915 d63a4cb7c7a76fee1fe1813dce038123 326 PIRSF PIRSF017082 1 326 1.2E-73 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01445 75e42a4919080726d203e60d2f718a09 329 PANTHER PTHR30349:SF32 9 295 2.7E-83 T 19-04-2016 ALIDE2_RS01445 75e42a4919080726d203e60d2f718a09 329 PIRSF PIRSF017082 1 328 2.1E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01445 75e42a4919080726d203e60d2f718a09 329 PANTHER PTHR30349 9 295 2.7E-83 T 19-04-2016 ALIDE2_RS01445 75e42a4919080726d203e60d2f718a09 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 325 8.6E-86 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01445 75e42a4919080726d203e60d2f718a09 329 SUPERFAMILY SSF53850 121 293 8.03E-13 T 19-04-2016 ALIDE2_RS02995 ce0873b779a97883f93e1c30ac6ee1c2 144 SUPERFAMILY SSF52821 17 120 1.51E-19 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS02995 ce0873b779a97883f93e1c30ac6ee1c2 144 SMART SM00450 22 127 2.2E-9 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS02995 ce0873b779a97883f93e1c30ac6ee1c2 144 Pfam PF00581 Rhodanese-like domain 25 119 6.8E-6 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS02995 ce0873b779a97883f93e1c30ac6ee1c2 144 Gene3D G3DSA:3.40.250.10 17 143 2.6E-27 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS01700 d482f294d7f3d462e533e5f5809d5fcd 335 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 331 7.3E-140 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS01700 d482f294d7f3d462e533e5f5809d5fcd 335 Gene3D G3DSA:3.20.20.70 8 334 5.0E-150 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS01700 d482f294d7f3d462e533e5f5809d5fcd 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 7.49E-58 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS01700 d482f294d7f3d462e533e5f5809d5fcd 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 7.49E-58 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS01700 d482f294d7f3d462e533e5f5809d5fcd 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 7.49E-58 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS01700 d482f294d7f3d462e533e5f5809d5fcd 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 7.49E-58 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS01700 d482f294d7f3d462e533e5f5809d5fcd 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 7.49E-58 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS01700 d482f294d7f3d462e533e5f5809d5fcd 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 7.49E-58 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS01700 d482f294d7f3d462e533e5f5809d5fcd 335 SUPERFAMILY SSF51569 7 334 2.34E-144 T 19-04-2016 ALIDE2_RS01700 d482f294d7f3d462e533e5f5809d5fcd 335 PIRSF PIRSF001415 2 335 1.9E-146 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS01700 d482f294d7f3d462e533e5f5809d5fcd 335 SMART SM01004 9 333 2.1E-241 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS01700 d482f294d7f3d462e533e5f5809d5fcd 335 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 19-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS01700 d482f294d7f3d462e533e5f5809d5fcd 335 PANTHER PTHR11458 5 333 2.3E-182 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 ALIDE2_RS21520 696bd3148eaa49288637f79de5d3718f 316 PANTHER PTHR32196 18 314 1.3E-98 T 19-04-2016 ALIDE2_RS21520 696bd3148eaa49288637f79de5d3718f 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 305 7.6E-44 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS21520 696bd3148eaa49288637f79de5d3718f 316 PANTHER PTHR32196:SF34 18 314 1.3E-98 T 19-04-2016 ALIDE2_RS23915 b753e3c03c3f8321685207b6a3792f73 59 Gene3D G3DSA:3.50.50.60 5 59 7.6E-6 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS23915 b753e3c03c3f8321685207b6a3792f73 59 PANTHER PTHR11806 1 59 2.5E-36 T 19-04-2016 ALIDE2_RS23915 b753e3c03c3f8321685207b6a3792f73 59 PANTHER PTHR11806:SF0 1 59 2.5E-36 T 19-04-2016 ALIDE2_RS23915 b753e3c03c3f8321685207b6a3792f73 59 Pfam PF01134 Glucose inhibited division protein A 2 59 6.9E-24 T 19-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 ALIDE2_RS12655 ebb1ed6849d221db372234c4a32d5b50 425 PANTHER PTHR33362:SF2 1 418 2.7E-130 T 19-04-2016 ALIDE2_RS12655 ebb1ed6849d221db372234c4a32d5b50 425 PIRSF PIRSF006066 1 425 1.7E-166 T 19-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 ALIDE2_RS12655 ebb1ed6849d221db372234c4a32d5b50 425 PANTHER PTHR33362 1 418 2.7E-130 T 19-04-2016 ALIDE2_RS12655 ebb1ed6849d221db372234c4a32d5b50 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 418 1.9E-135 T 19-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 ALIDE2_RS12655 ebb1ed6849d221db372234c4a32d5b50 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 413 9.9E-119 T 19-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit ALIDE2_RS12980 0bc9a16baac5d0dd7d906057d935af24 463 Gene3D G3DSA:1.10.3210.10 137 265 9.6E-12 T 19-04-2016 IPR006674 HD domain ALIDE2_RS12980 0bc9a16baac5d0dd7d906057d935af24 463 Pfam PF13487 HD domain 202 256 1.1E-9 T 19-04-2016 ALIDE2_RS12980 0bc9a16baac5d0dd7d906057d935af24 463 SUPERFAMILY SSF109604 140 269 2.66E-11 T 19-04-2016 ALIDE2_RS21500 15f8fb56c6e5c542dde4c5ae171bf177 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 8.6E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21500 15f8fb56c6e5c542dde4c5ae171bf177 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 8.6E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21500 15f8fb56c6e5c542dde4c5ae171bf177 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 8.6E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21500 15f8fb56c6e5c542dde4c5ae171bf177 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 8.6E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21500 15f8fb56c6e5c542dde4c5ae171bf177 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 8.6E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21500 15f8fb56c6e5c542dde4c5ae171bf177 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 8.6E-37 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21500 15f8fb56c6e5c542dde4c5ae171bf177 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.4E-11 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21500 15f8fb56c6e5c542dde4c5ae171bf177 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 2.4E-11 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21500 15f8fb56c6e5c542dde4c5ae171bf177 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 2.4E-11 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21500 15f8fb56c6e5c542dde4c5ae171bf177 257 Gene3D G3DSA:3.40.50.720 6 254 1.8E-81 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21500 15f8fb56c6e5c542dde4c5ae171bf177 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 251 2.4E-59 T 19-04-2016 ALIDE2_RS21500 15f8fb56c6e5c542dde4c5ae171bf177 257 SUPERFAMILY SSF51735 7 255 2.64E-76 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21500 15f8fb56c6e5c542dde4c5ae171bf177 257 PANTHER PTHR24322 161 194 2.5E-48 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21500 15f8fb56c6e5c542dde4c5ae171bf177 257 PANTHER PTHR24322 16 145 2.5E-48 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS21500 15f8fb56c6e5c542dde4c5ae171bf177 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ALIDE2_RS21260 8a973fed832b1ea1a86d24afb7f38f67 322 SUPERFAMILY SSF53850 107 280 9.52E-19 T 19-04-2016 ALIDE2_RS21260 8a973fed832b1ea1a86d24afb7f38f67 322 PANTHER PTHR30349:SF16 1 292 2.5E-97 T 19-04-2016 ALIDE2_RS21260 8a973fed832b1ea1a86d24afb7f38f67 322 Gene3D G3DSA:3.40.190.10 125 237 1.2E-6 T 19-04-2016 ALIDE2_RS21260 8a973fed832b1ea1a86d24afb7f38f67 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 317 2.0E-85 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS21260 8a973fed832b1ea1a86d24afb7f38f67 322 PIRSF PIRSF017082 1 321 7.6E-80 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS21260 8a973fed832b1ea1a86d24afb7f38f67 322 PANTHER PTHR30349 1 292 2.5E-97 T 19-04-2016 ALIDE2_RS19915 f88b8cd6646ccc0870cc2508e7e715fa 358 PANTHER PTHR11432:SF3 9 358 9.5E-161 T 19-04-2016 ALIDE2_RS19915 f88b8cd6646ccc0870cc2508e7e715fa 358 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 24 353 24.636 T 19-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 ALIDE2_RS19915 f88b8cd6646ccc0870cc2508e7e715fa 358 PANTHER PTHR11432 9 358 9.5E-161 T 19-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 ALIDE2_RS19915 f88b8cd6646ccc0870cc2508e7e715fa 358 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 236 249 - T 19-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 ALIDE2_RS19915 f88b8cd6646ccc0870cc2508e7e715fa 358 Pfam PF00146 NADH dehydrogenase 30 346 1.4E-123 T 19-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 ALIDE2_RS19915 f88b8cd6646ccc0870cc2508e7e715fa 358 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 70 85 - T 19-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 Pfam PF14841 FliG middle domain 115 182 3.1E-24 T 19-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 Gene3D G3DSA:1.10.220.30 4 66 3.3E-17 T 19-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 Gene3D G3DSA:1.10.220.30 193 330 7.5E-43 T 19-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 Gene3D G3DSA:1.10.220.30 74 181 1.1E-29 T 19-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 PANTHER PTHR30534:SF0 5 331 1.1E-100 T 19-04-2016 ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 PANTHER PTHR30534 5 331 1.1E-100 T 19-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 Pfam PF01706 FliG C-terminal domain 216 322 1.9E-40 T 19-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 PIRSF PIRSF003161 1 331 1.2E-113 T 19-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 SUPERFAMILY SSF48029 113 323 1.31E-65 T 19-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 SUPERFAMILY SSF48029 3 122 2.22E-23 T 19-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 Pfam PF14842 FliG N-terminal domain 5 102 3.2E-30 T 19-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 3.9E-64 T 19-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 3.9E-64 T 19-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 3.9E-64 T 19-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 3.9E-64 T 19-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 3.9E-64 T 19-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 112 135 3.9E-64 T 19-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 3.9E-64 T 19-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ALIDE2_RS20850 28db8179bd50763f45d43455b2a4b8eb 331 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 7 329 3.3E-106 T 19-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ALIDE2_RS05030 f1ea6e74b2ad0e7ba8ff28c407a12c3b 330 SUPERFAMILY SSF53850 119 288 7.48E-9 T 19-04-2016 ALIDE2_RS05030 f1ea6e74b2ad0e7ba8ff28c407a12c3b 330 PANTHER PTHR30349:SF32 2 230 1.8E-52 T 19-04-2016 ALIDE2_RS05030 f1ea6e74b2ad0e7ba8ff28c407a12c3b 330 PANTHER PTHR30349 2 230 1.8E-52 T 19-04-2016 ALIDE2_RS05030 f1ea6e74b2ad0e7ba8ff28c407a12c3b 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 327 2.4E-47 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS05030 f1ea6e74b2ad0e7ba8ff28c407a12c3b 330 PIRSF PIRSF017082 1 330 3.6E-60 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12385 de33bf52d1b13c06913f6a316b909f7c 153 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 121 1.6E-21 T 19-04-2016 ALIDE2_RS12385 de33bf52d1b13c06913f6a316b909f7c 153 PANTHER PTHR21366 2 149 2.1E-35 T 19-04-2016 ALIDE2_RS12385 de33bf52d1b13c06913f6a316b909f7c 153 Gene3D G3DSA:3.10.180.10 3 145 9.4E-17 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS12385 de33bf52d1b13c06913f6a316b909f7c 153 SUPERFAMILY SSF54593 1 145 4.48E-16 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS12385 de33bf52d1b13c06913f6a316b909f7c 153 PANTHER PTHR21366:SF0 2 149 2.1E-35 T 19-04-2016 ALIDE2_RS12680 9cec2063f43ac780fac3452ce54abbf1 86 Gene3D G3DSA:1.10.357.10 17 77 7.6E-4 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS12680 9cec2063f43ac780fac3452ce54abbf1 86 Pfam PF02583 Metal-sensitive transcriptional repressor 7 82 1.3E-21 T 19-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 ALIDE2_RS12680 9cec2063f43ac780fac3452ce54abbf1 86 PANTHER PTHR33677 1 86 3.0E-23 T 19-04-2016 ALIDE2_RS00805 be510840aa6d955a10de1da2d5114b9b 341 PANTHER PTHR30349:SF16 16 299 5.8E-93 T 19-04-2016 ALIDE2_RS00805 be510840aa6d955a10de1da2d5114b9b 341 PANTHER PTHR30349 16 299 5.8E-93 T 19-04-2016 ALIDE2_RS00805 be510840aa6d955a10de1da2d5114b9b 341 PIRSF PIRSF017082 8 341 3.7E-84 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00805 be510840aa6d955a10de1da2d5114b9b 341 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 65 334 7.5E-89 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00805 be510840aa6d955a10de1da2d5114b9b 341 SUPERFAMILY SSF53850 130 308 2.29E-14 T 19-04-2016 ALIDE2_RS03610 954c01158e14d23e4a319775ff78ccc7 482 Pfam PF01040 UbiA prenyltransferase family 220 442 7.9E-20 T 19-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 ALIDE2_RS03610 954c01158e14d23e4a319775ff78ccc7 482 Gene3D G3DSA:3.40.50.1000 9 167 3.3E-8 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS03610 954c01158e14d23e4a319775ff78ccc7 482 Pfam PF12710 haloacid dehalogenase-like hydrolase 10 149 8.3E-9 T 19-04-2016 ALIDE2_RS03610 954c01158e14d23e4a319775ff78ccc7 482 SUPERFAMILY SSF56784 9 168 2.76E-11 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS03610 954c01158e14d23e4a319775ff78ccc7 482 PANTHER PTHR11048:SF5 149 345 1.0E-42 T 19-04-2016 ALIDE2_RS03610 954c01158e14d23e4a319775ff78ccc7 482 PANTHER PTHR11048 149 345 1.0E-42 T 19-04-2016 ALIDE2_RS19610 4087f12977d4918b4fc12c3d6d55df5e 70 Pfam PF11174 Protein of unknown function (DUF2970) 15 69 2.8E-17 T 19-04-2016 IPR021344 Protein of unknown function DUF2970 ALIDE2_RS18120 6d3a164d6cdbf8bbf836332f541e854b 651 Gene3D G3DSA:2.40.170.20 170 651 3.8E-96 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS18120 6d3a164d6cdbf8bbf836332f541e854b 651 Gene3D G3DSA:2.170.130.10 40 169 7.9E-40 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS18120 6d3a164d6cdbf8bbf836332f541e854b 651 PANTHER PTHR30069 46 595 8.1E-60 T 19-04-2016 ALIDE2_RS18120 6d3a164d6cdbf8bbf836332f541e854b 651 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 166 1.1E-27 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS18120 6d3a164d6cdbf8bbf836332f541e854b 651 SUPERFAMILY SSF56935 46 651 1.78E-120 T 19-04-2016 ALIDE2_RS18120 6d3a164d6cdbf8bbf836332f541e854b 651 Pfam PF00593 TonB dependent receptor 409 649 6.2E-31 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS18120 6d3a164d6cdbf8bbf836332f541e854b 651 PANTHER PTHR30069:SF2 46 595 8.1E-60 T 19-04-2016 ALIDE2_RS13045 9786db8bfc2280bc592a03495ee51c71 239 PANTHER PTHR24220 3 235 1.7E-83 T 19-04-2016 ALIDE2_RS13045 9786db8bfc2280bc592a03495ee51c71 239 Pfam PF00005 ABC transporter 18 164 9.0E-33 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS13045 9786db8bfc2280bc592a03495ee51c71 239 SMART SM00382 27 212 9.0E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS13045 9786db8bfc2280bc592a03495ee51c71 239 Gene3D G3DSA:3.40.50.300 1 231 1.0E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13045 9786db8bfc2280bc592a03495ee51c71 239 SUPERFAMILY SSF52540 2 235 2.72E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13045 9786db8bfc2280bc592a03495ee51c71 239 PANTHER PTHR24220:SF568 3 235 1.7E-83 T 19-04-2016 ALIDE2_RS20775 47e20d70bd46bf8a5376ecead4153a2b 120 SMART SM00448 2 115 5.7E-38 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20775 47e20d70bd46bf8a5376ecead4153a2b 120 Pfam PF00072 Response regulator receiver domain 4 115 2.6E-29 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 ALIDE2_RS20775 47e20d70bd46bf8a5376ecead4153a2b 120 Gene3D G3DSA:3.40.50.2300 3 120 1.7E-37 T 19-04-2016 ALIDE2_RS20775 47e20d70bd46bf8a5376ecead4153a2b 120 PANTHER PTHR26402 2 120 3.6E-43 T 19-04-2016 ALIDE2_RS20775 47e20d70bd46bf8a5376ecead4153a2b 120 SUPERFAMILY SSF52172 2 120 5.55E-38 T 19-04-2016 IPR011006 CheY-like superfamily ALIDE2_RS20520 ef3b2dac4e708cbd44c0398f38ff252a 304 Gene3D G3DSA:3.20.20.70 7 293 5.6E-86 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS20520 ef3b2dac4e708cbd44c0398f38ff252a 304 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 235 244 - T 19-04-2016 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|UniPathway: UPA00896 ALIDE2_RS20520 ef3b2dac4e708cbd44c0398f38ff252a 304 PANTHER PTHR10277 1 298 5.0E-161 T 19-04-2016 ALIDE2_RS20520 ef3b2dac4e708cbd44c0398f38ff252a 304 PANTHER PTHR10277:SF40 1 298 5.0E-161 T 19-04-2016 ALIDE2_RS20520 ef3b2dac4e708cbd44c0398f38ff252a 304 Pfam PF00682 HMGL-like 8 282 6.8E-55 T 19-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 ALIDE2_RS20520 ef3b2dac4e708cbd44c0398f38ff252a 304 SUPERFAMILY SSF51569 5 303 2.01E-70 T 19-04-2016 ALIDE2_RS07630 7121294fe701c2df7def0172a61264ba 281 SUPERFAMILY SSF51621 8 231 6.98E-59 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS07630 7121294fe701c2df7def0172a61264ba 281 PANTHER PTHR32308 9 275 2.0E-68 T 19-04-2016 IPR011206 Citrate lyase beta subunit-like ALIDE2_RS07630 7121294fe701c2df7def0172a61264ba 281 PIRSF PIRSF015582 2 280 1.4E-71 T 19-04-2016 IPR011206 Citrate lyase beta subunit-like ALIDE2_RS07630 7121294fe701c2df7def0172a61264ba 281 Gene3D G3DSA:3.20.20.60 7 231 7.3E-68 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS07630 7121294fe701c2df7def0172a61264ba 281 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 10 222 5.8E-40 T 19-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ALIDE2_RS14510 89e4f7926099c3cd9ea51d38948dbc98 210 SUPERFAMILY SSF50475 10 179 4.36E-34 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 ALIDE2_RS14510 89e4f7926099c3cd9ea51d38948dbc98 210 PIRSF PIRSF010372 1 204 8.4E-49 T 19-04-2016 IPR007396 Transcriptional regulator PAI 2-type ALIDE2_RS14510 89e4f7926099c3cd9ea51d38948dbc98 210 Pfam PF04299 Putative FMN-binding domain 1 161 1.6E-43 T 19-04-2016 IPR007396 Transcriptional regulator PAI 2-type ALIDE2_RS14510 89e4f7926099c3cd9ea51d38948dbc98 210 PANTHER PTHR35802 2 210 3.2E-40 T 19-04-2016 ALIDE2_RS14510 89e4f7926099c3cd9ea51d38948dbc98 210 PANTHER PTHR35802:SF1 2 210 3.2E-40 T 19-04-2016 ALIDE2_RS14510 89e4f7926099c3cd9ea51d38948dbc98 210 Gene3D G3DSA:2.30.110.10 1 202 2.6E-52 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 ALIDE2_RS06505 8d794a20a172afeb848625a6f11594f6 370 Gene3D G3DSA:3.40.50.720 6 144 2.1E-58 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS06505 8d794a20a172afeb848625a6f11594f6 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 122 7.6E-25 T 19-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ALIDE2_RS06505 8d794a20a172afeb848625a6f11594f6 370 SUPERFAMILY SSF55347 136 355 1.07E-69 T 19-04-2016 ALIDE2_RS06505 8d794a20a172afeb848625a6f11594f6 370 PANTHER PTHR10174 203 368 7.1E-130 T 19-04-2016 ALIDE2_RS06505 8d794a20a172afeb848625a6f11594f6 370 PANTHER PTHR10174 105 181 7.1E-130 T 19-04-2016 ALIDE2_RS06505 8d794a20a172afeb848625a6f11594f6 370 PIRSF PIRSF000148 3 370 2.7E-61 T 19-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 ALIDE2_RS06505 8d794a20a172afeb848625a6f11594f6 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 5 368 2.8E-197 T 19-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 ALIDE2_RS06505 8d794a20a172afeb848625a6f11594f6 370 Gene3D G3DSA:3.30.360.10 145 351 5.9E-67 T 19-04-2016 ALIDE2_RS06505 8d794a20a172afeb848625a6f11594f6 370 PANTHER PTHR10174:SF116 203 368 7.1E-130 T 19-04-2016 ALIDE2_RS06505 8d794a20a172afeb848625a6f11594f6 370 PANTHER PTHR10174:SF116 105 181 7.1E-130 T 19-04-2016 ALIDE2_RS06505 8d794a20a172afeb848625a6f11594f6 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 19-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 ALIDE2_RS06505 8d794a20a172afeb848625a6f11594f6 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 368 31.762 T 19-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 ALIDE2_RS06505 8d794a20a172afeb848625a6f11594f6 370 SUPERFAMILY SSF51735 6 149 3.01E-48 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS06505 8d794a20a172afeb848625a6f11594f6 370 SMART SM00859 5 124 5.2E-25 T 19-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ALIDE2_RS06505 8d794a20a172afeb848625a6f11594f6 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 146 354 2.4E-49 T 19-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 ALIDE2_RS19340 c5dcf44da608a559b82aa64cbc2e5a54 467 Gene3D G3DSA:3.30.870.10 97 302 2.0E-36 T 19-04-2016 ALIDE2_RS19340 c5dcf44da608a559b82aa64cbc2e5a54 467 SUPERFAMILY SSF56024 86 301 1.2E-43 T 19-04-2016 ALIDE2_RS19340 c5dcf44da608a559b82aa64cbc2e5a54 467 PANTHER PTHR21248:SF9 20 418 6.0E-66 T 19-04-2016 ALIDE2_RS19340 c5dcf44da608a559b82aa64cbc2e5a54 467 SMART SM00155 383 410 0.036 T 19-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 ALIDE2_RS19340 c5dcf44da608a559b82aa64cbc2e5a54 467 SMART SM00155 201 228 31.0 T 19-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 ALIDE2_RS19340 c5dcf44da608a559b82aa64cbc2e5a54 467 Gene3D G3DSA:3.30.870.10 307 442 1.2E-26 T 19-04-2016 ALIDE2_RS19340 c5dcf44da608a559b82aa64cbc2e5a54 467 SUPERFAMILY SSF56024 254 431 1.14E-28 T 19-04-2016 ALIDE2_RS19340 c5dcf44da608a559b82aa64cbc2e5a54 467 PANTHER PTHR21248 20 418 6.0E-66 T 19-04-2016 ALIDE2_RS19340 c5dcf44da608a559b82aa64cbc2e5a54 467 Pfam PF13091 PLD-like domain 317 434 5.0E-21 T 19-04-2016 IPR025202 Phospholipase D-like domain ALIDE2_RS19340 c5dcf44da608a559b82aa64cbc2e5a54 467 Pfam PF13091 PLD-like domain 118 261 1.3E-15 T 19-04-2016 IPR025202 Phospholipase D-like domain ALIDE2_RS14375 2ff292830fcaef65df9178a26dbf8b36 311 Gene3D G3DSA:3.40.190.10 99 178 7.5E-8 T 19-04-2016 ALIDE2_RS14375 2ff292830fcaef65df9178a26dbf8b36 311 SUPERFAMILY SSF46785 7 89 8.03E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14375 2ff292830fcaef65df9178a26dbf8b36 311 PANTHER PTHR30126 8 297 2.9E-77 T 19-04-2016 ALIDE2_RS14375 2ff292830fcaef65df9178a26dbf8b36 311 Gene3D G3DSA:3.40.190.10 179 259 9.6E-11 T 19-04-2016 ALIDE2_RS14375 2ff292830fcaef65df9178a26dbf8b36 311 PANTHER PTHR30126:SF4 8 297 2.9E-77 T 19-04-2016 ALIDE2_RS14375 2ff292830fcaef65df9178a26dbf8b36 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 5.3E-17 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS14375 2ff292830fcaef65df9178a26dbf8b36 311 SUPERFAMILY SSF53850 95 301 9.65E-28 T 19-04-2016 ALIDE2_RS14375 2ff292830fcaef65df9178a26dbf8b36 311 Gene3D G3DSA:1.10.10.10 11 93 3.3E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14375 2ff292830fcaef65df9178a26dbf8b36 311 Pfam PF03466 LysR substrate binding domain 95 295 1.1E-23 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS21595 47c6cd067887289b94d87bfaed730ee4 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 16.406 T 19-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21595 47c6cd067887289b94d87bfaed730ee4 37 PANTHER PTHR18804 1 37 2.6E-15 T 19-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21595 47c6cd067887289b94d87bfaed730ee4 37 SUPERFAMILY SSF57840 1 37 5.62E-15 T 19-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21595 47c6cd067887289b94d87bfaed730ee4 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 2.0E-8 T 19-04-2016 ALIDE2_RS21595 47c6cd067887289b94d87bfaed730ee4 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 19-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21595 47c6cd067887289b94d87bfaed730ee4 37 Pfam PF00444 Ribosomal protein L36 1 37 9.7E-17 T 19-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS21595 47c6cd067887289b94d87bfaed730ee4 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 6.8E-20 T 19-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ALIDE2_RS11625 15e4f1c1015c265bb02d823668360400 231 Pfam PF04172 LrgB-like family 17 228 1.6E-64 T 19-04-2016 IPR007300 CidB/LrgB family ALIDE2_RS11625 15e4f1c1015c265bb02d823668360400 231 PANTHER PTHR30249:SF5 15 231 2.6E-66 T 19-04-2016 ALIDE2_RS11625 15e4f1c1015c265bb02d823668360400 231 PANTHER PTHR30249 15 231 2.6E-66 T 19-04-2016 ALIDE2_RS19695 4d5ad27c5e348a8457875fee315df2e6 110 Pfam PF11720 Peptidase inhibitor I78 family 46 110 6.2E-12 T 19-04-2016 IPR021719 Proteinase inhibitor I78 ALIDE2_RS21155 9033601336b530f5d576307b30e1eeb5 345 PANTHER PTHR30482:SF5 7 342 2.2E-100 T 19-04-2016 ALIDE2_RS21155 9033601336b530f5d576307b30e1eeb5 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 320 1.4E-35 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS21155 9033601336b530f5d576307b30e1eeb5 345 PANTHER PTHR30482 7 342 2.2E-100 T 19-04-2016 ALIDE2_RS07715 da1a7be30c7a5dc50b90f5a3a20817d8 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 317 5.8E-73 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS07715 da1a7be30c7a5dc50b90f5a3a20817d8 322 SUPERFAMILY SSF53850 109 283 1.93E-9 T 19-04-2016 ALIDE2_RS07715 da1a7be30c7a5dc50b90f5a3a20817d8 322 PIRSF PIRSF017082 1 322 7.4E-75 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS07715 da1a7be30c7a5dc50b90f5a3a20817d8 322 PANTHER PTHR30349:SF16 1 294 2.7E-74 T 19-04-2016 ALIDE2_RS07715 da1a7be30c7a5dc50b90f5a3a20817d8 322 PANTHER PTHR30349 1 294 2.7E-74 T 19-04-2016 ALIDE2_RS23325 f80a2d292f37014fa9e043ad0930c2b4 134 Pfam PF00545 ribonuclease 48 131 1.4E-28 T 19-04-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 ALIDE2_RS23325 f80a2d292f37014fa9e043ad0930c2b4 134 Gene3D G3DSA:3.10.450.30 41 133 1.9E-40 T 19-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 ALIDE2_RS23325 f80a2d292f37014fa9e043ad0930c2b4 134 SUPERFAMILY SSF53933 41 132 9.92E-35 T 19-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 ALIDE2_RS04535 bc6b3750ac94d1065e24fb59ac5538e4 282 SUPERFAMILY SSF161098 4 278 7.06E-59 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS04535 bc6b3750ac94d1065e24fb59ac5538e4 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 277 1.9E-18 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS04535 bc6b3750ac94d1065e24fb59ac5538e4 282 Gene3D G3DSA:1.10.3720.10 4 271 1.6E-50 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS04535 bc6b3750ac94d1065e24fb59ac5538e4 282 PANTHER PTHR32243:SF31 1 280 3.1E-121 T 19-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 ALIDE2_RS04535 bc6b3750ac94d1065e24fb59ac5538e4 282 PANTHER PTHR32243 1 280 3.1E-121 T 19-04-2016 ALIDE2_RS19210 3bcc4ad700d6ca6f7b8f893e2aa9508b 826 Gene3D G3DSA:1.20.1640.10 656 807 1.1E-18 T 19-04-2016 ALIDE2_RS19210 3bcc4ad700d6ca6f7b8f893e2aa9508b 826 Gene3D G3DSA:1.20.1640.10 240 415 1.1E-21 T 19-04-2016 ALIDE2_RS19210 3bcc4ad700d6ca6f7b8f893e2aa9508b 826 PANTHER PTHR33406:SF2 16 119 1.6E-86 T 19-04-2016 ALIDE2_RS19210 3bcc4ad700d6ca6f7b8f893e2aa9508b 826 PANTHER PTHR33406:SF2 154 802 1.6E-86 T 19-04-2016 ALIDE2_RS19210 3bcc4ad700d6ca6f7b8f893e2aa9508b 826 Pfam PF03176 MMPL family 636 805 5.7E-8 T 19-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 ALIDE2_RS19210 3bcc4ad700d6ca6f7b8f893e2aa9508b 826 Pfam PF03176 MMPL family 238 449 4.2E-5 T 19-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 ALIDE2_RS19210 3bcc4ad700d6ca6f7b8f893e2aa9508b 826 PANTHER PTHR33406 16 119 1.6E-86 T 19-04-2016 ALIDE2_RS19210 3bcc4ad700d6ca6f7b8f893e2aa9508b 826 PANTHER PTHR33406 154 802 1.6E-86 T 19-04-2016 ALIDE2_RS19210 3bcc4ad700d6ca6f7b8f893e2aa9508b 826 SUPERFAMILY SSF82866 241 414 3.14E-24 T 19-04-2016 ALIDE2_RS19210 3bcc4ad700d6ca6f7b8f893e2aa9508b 826 SUPERFAMILY SSF82866 657 807 2.49E-27 T 19-04-2016 ALIDE2_RS00360 eeac169cd2e5ac65822f787c7500b467 488 PANTHER PTHR21432 1 487 2.2E-245 T 19-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 ALIDE2_RS00360 eeac169cd2e5ac65822f787c7500b467 488 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 1 486 3.7E-235 T 19-04-2016 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 ALIDE2_RS00360 eeac169cd2e5ac65822f787c7500b467 488 SUPERFAMILY SSF100950 217 486 1.35E-81 T 19-04-2016 ALIDE2_RS00360 eeac169cd2e5ac65822f787c7500b467 488 Gene3D G3DSA:3.40.810.20 217 480 7.0E-72 T 19-04-2016 ALIDE2_RS00360 eeac169cd2e5ac65822f787c7500b467 488 PANTHER PTHR21432:SF10 1 487 2.2E-245 T 19-04-2016 ALIDE2_RS00360 eeac169cd2e5ac65822f787c7500b467 488 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 310 454 4.0E-41 T 19-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain ALIDE2_RS00360 eeac169cd2e5ac65822f787c7500b467 488 Gene3D G3DSA:3.40.1080.10 1 211 4.6E-37 T 19-04-2016 ALIDE2_RS00360 eeac169cd2e5ac65822f787c7500b467 488 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 2 207 8.2E-23 T 19-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 ALIDE2_RS00360 eeac169cd2e5ac65822f787c7500b467 488 SUPERFAMILY SSF100950 1 213 1.75E-62 T 19-04-2016 ALIDE2_RS15715 b04e25e59bc08c3569b6cc4e6152ec9c 116 Pfam PF14090 Helix-turn-helix domain 38 104 2.7E-16 T 19-04-2016 ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 Pfam PF01493 GXGXG motif 1304 1486 1.4E-77 T 19-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 Gene3D G3DSA:3.60.20.10 25 458 4.3E-183 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 Pfam PF04898 Glutamate synthase central domain 478 764 8.2E-111 T 19-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 Pfam PF01645 Conserved region in glutamate synthase 825 1222 3.2E-152 T 19-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 Gene3D G3DSA:3.20.20.70 868 1268 3.3E-180 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 SUPERFAMILY SSF56235 25 450 1.64E-150 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 PANTHER PTHR11938:SF1 14 937 0.0 T 19-04-2016 ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 PANTHER PTHR11938:SF1 1503 1554 0.0 T 19-04-2016 ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 PANTHER PTHR11938:SF1 958 1486 0.0 T 19-04-2016 ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 Pfam PF00310 Glutamine amidotransferases class-II 25 448 1.5E-183 T 19-04-2016 IPR017932 Glutamine amidotransferase type 2 domain ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 Gene3D G3DSA:2.160.20.60 1276 1557 3.9E-101 T 19-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 PANTHER PTHR11938 14 937 0.0 T 19-04-2016 ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 PANTHER PTHR11938 1503 1554 0.0 T 19-04-2016 ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 PANTHER PTHR11938 958 1486 0.0 T 19-04-2016 ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 SUPERFAMILY SSF51395 474 1268 4.03E-263 T 19-04-2016 ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 SUPERFAMILY SSF69336 1271 1549 2.62E-90 T 19-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 ALIDE2_RS04030 851ace945582d4fe7f178920e38c9ad8 1577 Gene3D G3DSA:3.20.20.70 469 815 1.4E-107 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS03445 d18b5ce995b1b7655b417887e196b6cb 320 TIGRFAM TIGR03018 pepcterm_TyrKin: exopolysaccharide/PEP-CTERM locus tyrosine autokinase 80 288 1.3E-85 T 19-04-2016 ALIDE2_RS03445 d18b5ce995b1b7655b417887e196b6cb 320 PANTHER PTHR32309:SF13 119 315 1.0E-39 T 19-04-2016 ALIDE2_RS03445 d18b5ce995b1b7655b417887e196b6cb 320 Gene3D G3DSA:3.40.50.300 116 292 2.3E-29 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03445 d18b5ce995b1b7655b417887e196b6cb 320 PANTHER PTHR32309 119 315 1.0E-39 T 19-04-2016 ALIDE2_RS03445 d18b5ce995b1b7655b417887e196b6cb 320 Pfam PF13614 AAA domain 119 280 5.7E-10 T 19-04-2016 IPR025669 AAA domain ALIDE2_RS03445 d18b5ce995b1b7655b417887e196b6cb 320 SUPERFAMILY SSF52540 117 292 3.66E-30 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02515 d294c1cc89c52393c41ab0fe7cc5a8f5 563 SUPERFAMILY SSF52540 7 269 1.03E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS02515 d294c1cc89c52393c41ab0fe7cc5a8f5 563 PANTHER PTHR35894:SF2 2 272 8.3E-108 T 19-04-2016 ALIDE2_RS02515 d294c1cc89c52393c41ab0fe7cc5a8f5 563 PANTHER PTHR35894 2 272 8.3E-108 T 19-04-2016 ALIDE2_RS02515 d294c1cc89c52393c41ab0fe7cc5a8f5 563 SUPERFAMILY SSF47090 494 553 1.28E-7 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS02515 d294c1cc89c52393c41ab0fe7cc5a8f5 563 Pfam PF13401 AAA domain 42 175 1.3E-22 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS02515 d294c1cc89c52393c41ab0fe7cc5a8f5 563 SMART SM00382 42 190 3.0E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS02515 d294c1cc89c52393c41ab0fe7cc5a8f5 563 Gene3D G3DSA:1.10.101.10 497 551 2.8E-5 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS02515 d294c1cc89c52393c41ab0fe7cc5a8f5 563 Gene3D G3DSA:3.40.50.300 26 187 9.2E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10075 683f57c0ec82da8d73d82d2c889b63fa 652 Pfam PF05876 Phage terminase large subunit (GpA) 36 597 5.8E-206 T 19-04-2016 IPR008866 Bacteriophage lambda, GpA ALIDE2_RS02580 2c20a51b74a4693d80eeb69dd3979f13 273 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 6 272 4.0E-125 T 19-04-2016 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase GO:0019439 UniPathway: UPA00208 ALIDE2_RS02580 2c20a51b74a4693d80eeb69dd3979f13 273 Gene3D G3DSA:3.90.850.10 8 272 1.1E-84 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS02580 2c20a51b74a4693d80eeb69dd3979f13 273 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 91 269 5.1E-7 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS02580 2c20a51b74a4693d80eeb69dd3979f13 273 PANTHER PTHR30143 1 272 2.5E-88 T 19-04-2016 ALIDE2_RS02580 2c20a51b74a4693d80eeb69dd3979f13 273 SUPERFAMILY SSF56529 6 272 3.92E-77 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS02770 16aabff96ae0a079c9150bc453d7c49c 130 SMART SM00905 17 127 2.5E-29 T 19-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 ALIDE2_RS02770 16aabff96ae0a079c9150bc453d7c49c 130 Pfam PF02152 Dihydroneopterin aldolase 18 121 2.4E-21 T 19-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 ALIDE2_RS02770 16aabff96ae0a079c9150bc453d7c49c 130 SUPERFAMILY SSF55620 16 120 5.17E-23 T 19-04-2016 ALIDE2_RS02770 16aabff96ae0a079c9150bc453d7c49c 130 TIGRFAM TIGR00526 folB_dom: FolB domain 16 126 1.1E-13 T 19-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 ALIDE2_RS02770 16aabff96ae0a079c9150bc453d7c49c 130 Gene3D G3DSA:3.30.1130.10 16 125 2.0E-26 T 19-04-2016 ALIDE2_RS01450 2d1f5c0d9fb765a24a51910be051c9e0 228 SUPERFAMILY SSF89562 25 181 2.88E-46 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS01450 2d1f5c0d9fb765a24a51910be051c9e0 228 Pfam PF03737 Demethylmenaquinone methyltransferase 31 175 2.6E-42 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS01450 2d1f5c0d9fb765a24a51910be051c9e0 228 PANTHER PTHR33254:SF5 6 205 2.6E-51 T 19-04-2016 ALIDE2_RS01450 2d1f5c0d9fb765a24a51910be051c9e0 228 Gene3D G3DSA:3.50.30.40 25 181 6.0E-50 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS01450 2d1f5c0d9fb765a24a51910be051c9e0 228 PANTHER PTHR33254 6 205 2.6E-51 T 19-04-2016 ALIDE2_RS08965 d68a9d74c5fd426d2dc53fbd957e724c 79 Pfam PF11660 Protein of unknown function (DUF3262) 4 78 3.4E-25 T 19-04-2016 IPR021676 Protein of unknown function DUF3262 ALIDE2_RS08965 d68a9d74c5fd426d2dc53fbd957e724c 79 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 4 79 2.0E-30 T 19-04-2016 IPR021676 Protein of unknown function DUF3262 ALIDE2_RS18175 35bbcd338bc21fb5e6b8439ea87eb1b6 98 SUPERFAMILY SSF54909 2 90 6.17E-18 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel ALIDE2_RS18175 35bbcd338bc21fb5e6b8439ea87eb1b6 98 Gene3D G3DSA:3.30.70.1060 2 91 6.7E-19 T 19-04-2016 ALIDE2_RS18175 35bbcd338bc21fb5e6b8439ea87eb1b6 98 Pfam PF03795 YCII-related domain 15 88 8.0E-17 T 19-04-2016 IPR005545 YCII-related ALIDE2_RS11950 ab8f52ef96db479a9328f9168717f8a8 133 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 1.3E-67 T 19-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 ALIDE2_RS11950 ab8f52ef96db479a9328f9168717f8a8 133 Pfam PF01592 NifU-like N terminal domain 2 127 2.7E-57 T 19-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 ALIDE2_RS11950 ab8f52ef96db479a9328f9168717f8a8 133 PANTHER PTHR10093 1 128 4.6E-100 T 19-04-2016 ALIDE2_RS11950 ab8f52ef96db479a9328f9168717f8a8 133 SUPERFAMILY SSF82649 1 126 2.15E-47 T 19-04-2016 ALIDE2_RS11950 ab8f52ef96db479a9328f9168717f8a8 133 Gene3D G3DSA:3.90.1010.10 2 128 1.8E-55 T 19-04-2016 ALIDE2_RS11950 ab8f52ef96db479a9328f9168717f8a8 133 PANTHER PTHR10093:SF3 1 128 4.6E-100 T 19-04-2016 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 SUPERFAMILY SSF88659 221 309 5.23E-15 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 12 309 50.116 T 19-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 59 307 1.1E-31 T 19-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 Gene3D G3DSA:1.10.10.10 245 307 1.6E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 SUPERFAMILY SSF88946 26 133 6.41E-40 T 19-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 25 308 2.8E-119 T 19-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 PRINTS PR00046 Major sigma-70 factor signature 88 101 6.9E-16 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 PRINTS PR00046 Major sigma-70 factor signature 292 303 6.9E-16 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 PRINTS PR00046 Major sigma-70 factor signature 277 292 6.9E-16 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 PRINTS PR00046 Major sigma-70 factor signature 112 120 6.9E-16 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 Pfam PF04542 Sigma-70 region 2 64 133 1.7E-17 T 19-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 88 101 - T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 Gene3D G3DSA:1.10.601.10 26 133 1.5E-36 T 19-04-2016 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 Pfam PF00140 Sigma-70 factor, region 1.2 27 56 3.8E-5 T 19-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 Pfam PF04545 Sigma-70, region 4 249 305 1.5E-14 T 19-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 277 303 - T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS19655 d0478fbce7b5411ed923cbe81b8776b8 311 PANTHER PTHR30376 13 307 6.7E-97 T 19-04-2016 ALIDE2_RS11770 265aa6e2512f125a19115f357b3d29c3 145 PANTHER PTHR38767 12 142 1.8E-16 T 19-04-2016 ALIDE2_RS11770 265aa6e2512f125a19115f357b3d29c3 145 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 133 1.1E-35 T 19-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 ALIDE2_RS11770 265aa6e2512f125a19115f357b3d29c3 145 SUPERFAMILY SSF102400 1 138 1.57E-31 T 19-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 ALIDE2_RS11770 265aa6e2512f125a19115f357b3d29c3 145 Gene3D G3DSA:3.40.50.10110 1 138 3.3E-33 T 19-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 ALIDE2_RS20120 2de034d87e3a872d9cff6c261c6c1b57 346 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 1 345 34.031 T 19-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS20120 2de034d87e3a872d9cff6c261c6c1b57 346 PANTHER PTHR21015:SF22 1 345 4.3E-111 T 19-04-2016 ALIDE2_RS20120 2de034d87e3a872d9cff6c261c6c1b57 346 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 175 329 1.6E-39 T 19-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS20120 2de034d87e3a872d9cff6c261c6c1b57 346 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 1 135 2.2E-36 T 19-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS20120 2de034d87e3a872d9cff6c261c6c1b57 346 Gene3D G3DSA:3.40.50.2000 178 321 5.0E-28 T 19-04-2016 ALIDE2_RS20120 2de034d87e3a872d9cff6c261c6c1b57 346 SUPERFAMILY SSF53756 1 344 1.01E-118 T 19-04-2016 ALIDE2_RS20120 2de034d87e3a872d9cff6c261c6c1b57 346 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 339 2.4E-99 T 19-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS20120 2de034d87e3a872d9cff6c261c6c1b57 346 Gene3D G3DSA:3.40.50.2000 1 177 5.8E-67 T 19-04-2016 ALIDE2_RS20120 2de034d87e3a872d9cff6c261c6c1b57 346 PANTHER PTHR21015 1 345 4.3E-111 T 19-04-2016 ALIDE2_RS21005 047f12d8791269da3542dda79537a84c 416 SUPERFAMILY SSF64518 5 415 3.79E-63 T 19-04-2016 ALIDE2_RS21005 047f12d8791269da3542dda79537a84c 416 Gene3D G3DSA:1.20.1330.10 59 142 1.3E-15 T 19-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ALIDE2_RS21005 047f12d8791269da3542dda79537a84c 416 Gene3D G3DSA:1.20.1330.10 320 369 1.3E-15 T 19-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ALIDE2_RS21005 047f12d8791269da3542dda79537a84c 416 Gene3D G3DSA:1.20.1330.10 242 259 1.3E-15 T 19-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ALIDE2_RS21005 047f12d8791269da3542dda79537a84c 416 Pfam PF00669 Bacterial flagellin N-terminal helical region 7 141 8.2E-21 T 19-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ALIDE2_RS21005 047f12d8791269da3542dda79537a84c 416 PANTHER PTHR30244:SF5 328 415 1.2E-34 T 19-04-2016 ALIDE2_RS21005 047f12d8791269da3542dda79537a84c 416 PANTHER PTHR30244:SF5 5 193 1.2E-34 T 19-04-2016 ALIDE2_RS21005 047f12d8791269da3542dda79537a84c 416 PANTHER PTHR30244:SF5 218 303 1.2E-34 T 19-04-2016 ALIDE2_RS21005 047f12d8791269da3542dda79537a84c 416 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 6 415 3.7E-58 T 19-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 ALIDE2_RS21005 047f12d8791269da3542dda79537a84c 416 PANTHER PTHR30244 328 415 1.2E-34 T 19-04-2016 ALIDE2_RS21005 047f12d8791269da3542dda79537a84c 416 PANTHER PTHR30244 5 193 1.2E-34 T 19-04-2016 ALIDE2_RS21005 047f12d8791269da3542dda79537a84c 416 PANTHER PTHR30244 218 303 1.2E-34 T 19-04-2016 ALIDE2_RS22770 07042a165af53866d43a8492afd6a894 134 Pfam PF12512 Protein of unknown function (DUF3717) 4 68 4.3E-28 T 19-04-2016 IPR022191 Protein of unknown function DUF3717 ALIDE2_RS22770 07042a165af53866d43a8492afd6a894 134 PANTHER PTHR35175:SF2 43 120 5.9E-20 T 19-04-2016 ALIDE2_RS22770 07042a165af53866d43a8492afd6a894 134 Pfam PF06945 Protein of unknown function (DUF1289) 74 119 5.3E-17 T 19-04-2016 IPR010710 Protein of unknown function DUF1289 ALIDE2_RS22770 07042a165af53866d43a8492afd6a894 134 PANTHER PTHR35175 43 120 5.9E-20 T 19-04-2016 ALIDE2_RS05785 44ca46b18295456d96394bd089f72317 134 SUPERFAMILY SSF50249 13 121 2.06E-17 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS05785 44ca46b18295456d96394bd089f72317 134 PANTHER PTHR34075 18 125 1.0E-13 T 19-04-2016 ALIDE2_RS05785 44ca46b18295456d96394bd089f72317 134 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 57 115 8.4E-14 T 19-04-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal ALIDE2_RS01320 3d54215c3784afeafd6052f6aec35562 71 SUPERFAMILY SSF46689 21 70 3.54E-8 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS01320 3d54215c3784afeafd6052f6aec35562 71 SMART SM00342 2 68 4.0E-9 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS01320 3d54215c3784afeafd6052f6aec35562 71 Pfam PF12833 Helix-turn-helix domain 2 68 1.3E-16 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ALIDE2_RS01320 3d54215c3784afeafd6052f6aec35562 71 Gene3D G3DSA:1.10.10.60 21 69 6.2E-9 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS01320 3d54215c3784afeafd6052f6aec35562 71 PANTHER PTHR11019:SF61 2 60 2.7E-12 T 19-04-2016 ALIDE2_RS01320 3d54215c3784afeafd6052f6aec35562 71 PANTHER PTHR11019 2 60 2.7E-12 T 19-04-2016 ALIDE2_RS12480 529ec230bd23ff715578deab867a539a 330 PIRSF PIRSF017082 2 329 2.5E-73 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12480 529ec230bd23ff715578deab867a539a 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 326 1.0E-82 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12480 529ec230bd23ff715578deab867a539a 330 PANTHER PTHR30349 2 327 1.5E-85 T 19-04-2016 ALIDE2_RS12480 529ec230bd23ff715578deab867a539a 330 SUPERFAMILY SSF53850 57 293 4.74E-13 T 19-04-2016 ALIDE2_RS12480 529ec230bd23ff715578deab867a539a 330 PANTHER PTHR30349:SF32 2 327 1.5E-85 T 19-04-2016 ALIDE2_RS12185 9696bbb44f3d26aaf1288b5eb9894ef4 364 SMART SM00771 213 343 9.8E-7 T 19-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 ALIDE2_RS12185 9696bbb44f3d26aaf1288b5eb9894ef4 364 Gene3D G3DSA:3.30.1400.10 274 345 2.8E-7 T 19-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 ALIDE2_RS12185 9696bbb44f3d26aaf1288b5eb9894ef4 364 SUPERFAMILY SSF64383 212 347 1.12E-14 T 19-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 ALIDE2_RS14675 a2deaf7a6e4a55ecdf67ddddd8853a41 491 PANTHER PTHR24096 138 476 5.0E-44 T 19-04-2016 ALIDE2_RS14675 a2deaf7a6e4a55ecdf67ddddd8853a41 491 PANTHER PTHR24096:SF232 138 476 5.0E-44 T 19-04-2016 ALIDE2_RS14675 a2deaf7a6e4a55ecdf67ddddd8853a41 491 Gene3D G3DSA:2.30.38.10 302 374 4.1E-12 T 19-04-2016 ALIDE2_RS14675 a2deaf7a6e4a55ecdf67ddddd8853a41 491 Gene3D G3DSA:3.40.50.980 30 114 4.5E-4 T 19-04-2016 ALIDE2_RS14675 a2deaf7a6e4a55ecdf67ddddd8853a41 491 ProSitePatterns PS00455 Putative AMP-binding domain signature. 138 149 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS14675 a2deaf7a6e4a55ecdf67ddddd8853a41 491 Pfam PF13193 AMP-binding enzyme C-terminal domain 393 470 1.6E-10 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS14675 a2deaf7a6e4a55ecdf67ddddd8853a41 491 Gene3D G3DSA:3.40.50.980 132 295 2.1E-20 T 19-04-2016 ALIDE2_RS14675 a2deaf7a6e4a55ecdf67ddddd8853a41 491 Pfam PF00501 AMP-binding enzyme 128 384 7.4E-35 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS14675 a2deaf7a6e4a55ecdf67ddddd8853a41 491 SUPERFAMILY SSF56801 19 479 7.46E-78 T 19-04-2016 ALIDE2_RS14675 a2deaf7a6e4a55ecdf67ddddd8853a41 491 Gene3D G3DSA:3.30.300.30 383 478 4.7E-18 T 19-04-2016 ALIDE2_RS17190 1c1f94fbdd2d6e290dba71a055bfb882 245 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 9 229 1.8E-80 T 19-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 ALIDE2_RS17190 1c1f94fbdd2d6e290dba71a055bfb882 245 Gene3D G3DSA:3.40.1180.10 4 236 2.2E-93 T 19-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 ALIDE2_RS17190 1c1f94fbdd2d6e290dba71a055bfb882 245 Pfam PF01255 Putative undecaprenyl diphosphate synthase 16 229 4.9E-78 T 19-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 ALIDE2_RS17190 1c1f94fbdd2d6e290dba71a055bfb882 245 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 9 230 38.172 T 19-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 ALIDE2_RS17190 1c1f94fbdd2d6e290dba71a055bfb882 245 PANTHER PTHR10291 9 242 9.5E-118 T 19-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 ALIDE2_RS17190 1c1f94fbdd2d6e290dba71a055bfb882 245 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 175 192 - T 19-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 ALIDE2_RS17190 1c1f94fbdd2d6e290dba71a055bfb882 245 SUPERFAMILY SSF64005 7 225 1.7E-80 T 19-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 ALIDE2_RS06055 ba63a52e7ff9c8c9d2deee7ef162945e 146 Pfam PF05425 Copper resistance protein D 45 136 2.2E-11 T 19-04-2016 IPR008457 Copper resistance protein D GO:0016021 ALIDE2_RS22670 93da6e09a6c3480176a89ac940ae7d3e 764 Pfam PF07793 Protein of unknown function (DUF1631) 7 753 6.2E-145 T 19-04-2016 IPR012434 Protein of unknown function DUF1631 ALIDE2_RS09705 56afccfe61d1651d54150d3743cbadd7 149 Gene3D G3DSA:1.10.10.60 90 132 1.0E-5 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS09705 56afccfe61d1651d54150d3743cbadd7 149 Pfam PF00239 Resolvase, N terminal domain 2 88 8.4E-25 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS09705 56afccfe61d1651d54150d3743cbadd7 149 SUPERFAMILY SSF53041 2 87 4.32E-24 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS09705 56afccfe61d1651d54150d3743cbadd7 149 ProSitePatterns PS00398 Site-specific recombinases signature 2. 4 16 - T 19-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ALIDE2_RS09705 56afccfe61d1651d54150d3743cbadd7 149 Gene3D G3DSA:3.40.50.1390 1 72 3.1E-19 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS09705 56afccfe61d1651d54150d3743cbadd7 149 SMART SM00857 1 88 7.5E-6 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS09705 56afccfe61d1651d54150d3743cbadd7 149 PANTHER PTHR30461 4 133 1.1E-28 T 19-04-2016 ALIDE2_RS09705 56afccfe61d1651d54150d3743cbadd7 149 SUPERFAMILY SSF46689 90 132 4.82E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS22630 d8f90e7e8b82d3d0e7f9e4ecbe67336f 179 PANTHER PTHR40202:SF1 5 172 5.0E-34 T 19-04-2016 ALIDE2_RS22630 d8f90e7e8b82d3d0e7f9e4ecbe67336f 179 TIGRFAM TIGR03276 Phn-HD: phosphonate degradation operons associated HDIG domain protein 5 175 1.7E-70 T 19-04-2016 IPR017670 Phosphonate degradation operon associated HDIG domain protein ALIDE2_RS22630 d8f90e7e8b82d3d0e7f9e4ecbe67336f 179 SUPERFAMILY SSF109604 4 78 1.55E-8 T 19-04-2016 ALIDE2_RS22630 d8f90e7e8b82d3d0e7f9e4ecbe67336f 179 PANTHER PTHR40202 5 172 5.0E-34 T 19-04-2016 ALIDE2_RS03860 7a8239915aeb72a777428791f939e2d7 96 SUPERFAMILY SSF50129 1 95 6.8E-35 T 19-04-2016 IPR011032 GroES-like ALIDE2_RS03860 7a8239915aeb72a777428791f939e2d7 96 PANTHER PTHR10772 1 95 1.2E-43 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ALIDE2_RS03860 7a8239915aeb72a777428791f939e2d7 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.637 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ALIDE2_RS03860 7a8239915aeb72a777428791f939e2d7 96 PRINTS PR00297 10kDa chaperonin signature 3 18 9.7E-33 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ALIDE2_RS03860 7a8239915aeb72a777428791f939e2d7 96 PRINTS PR00297 10kDa chaperonin signature 81 94 9.7E-33 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ALIDE2_RS03860 7a8239915aeb72a777428791f939e2d7 96 PRINTS PR00297 10kDa chaperonin signature 25 46 9.7E-33 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ALIDE2_RS03860 7a8239915aeb72a777428791f939e2d7 96 PRINTS PR00297 10kDa chaperonin signature 60 72 9.7E-33 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ALIDE2_RS03860 7a8239915aeb72a777428791f939e2d7 96 SMART SM00883 2 94 6.9E-58 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ALIDE2_RS03860 7a8239915aeb72a777428791f939e2d7 96 Gene3D G3DSA:2.30.33.40 1 95 1.4E-38 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ALIDE2_RS03860 7a8239915aeb72a777428791f939e2d7 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 19-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 ALIDE2_RS03860 7a8239915aeb72a777428791f939e2d7 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 9.9E-36 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ALIDE2_RS18820 b71c0f9be002f06080787c6f574903e4 95 Pfam PF04977 Septum formation initiator 14 91 4.6E-22 T 19-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 ALIDE2_RS18820 b71c0f9be002f06080787c6f574903e4 95 PANTHER PTHR37485:SF1 4 95 1.5E-25 T 19-04-2016 ALIDE2_RS18820 b71c0f9be002f06080787c6f574903e4 95 PANTHER PTHR37485 4 95 1.5E-25 T 19-04-2016 ALIDE2_RS18820 b71c0f9be002f06080787c6f574903e4 95 Hamap MF_00599 Cell division protein FtsB [ftsB]. 4 92 26.052 T 19-04-2016 IPR023081 Cell division protein FtsB ALIDE2_RS09965 3d786ad6473bdb5e1a0ed6f6e686d473 92 Pfam PF01381 Helix-turn-helix 7 60 2.0E-10 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS09965 3d786ad6473bdb5e1a0ed6f6e686d473 92 Gene3D G3DSA:1.10.260.40 3 77 1.2E-14 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS09965 3d786ad6473bdb5e1a0ed6f6e686d473 92 SUPERFAMILY SSF47413 1 65 9.98E-12 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS09965 3d786ad6473bdb5e1a0ed6f6e686d473 92 SMART SM00530 6 62 1.0E-9 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS01970 ccdbc57b0780912bd5172ee1b0b6f466 481 Gene3D G3DSA:1.20.1600.10 60 98 1.8E-105 T 19-04-2016 ALIDE2_RS01970 ccdbc57b0780912bd5172ee1b0b6f466 481 Gene3D G3DSA:1.20.1600.10 144 319 1.8E-105 T 19-04-2016 ALIDE2_RS01970 ccdbc57b0780912bd5172ee1b0b6f466 481 Gene3D G3DSA:1.20.1600.10 357 471 1.8E-105 T 19-04-2016 ALIDE2_RS01970 ccdbc57b0780912bd5172ee1b0b6f466 481 SUPERFAMILY SSF56954 5 473 6.8E-114 T 19-04-2016 ALIDE2_RS01970 ccdbc57b0780912bd5172ee1b0b6f466 481 Pfam PF02321 Outer membrane efflux protein 288 468 1.9E-27 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS01970 ccdbc57b0780912bd5172ee1b0b6f466 481 Pfam PF02321 Outer membrane efflux protein 72 256 4.5E-24 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS01970 ccdbc57b0780912bd5172ee1b0b6f466 481 PANTHER PTHR30203 1 471 8.9E-159 T 19-04-2016 ALIDE2_RS01970 ccdbc57b0780912bd5172ee1b0b6f466 481 PANTHER PTHR30203:SF15 1 471 8.9E-159 T 19-04-2016 ALIDE2_RS01970 ccdbc57b0780912bd5172ee1b0b6f466 481 Gene3D G3DSA:2.20.200.10 320 355 9.4E-19 T 19-04-2016 ALIDE2_RS01970 ccdbc57b0780912bd5172ee1b0b6f466 481 Gene3D G3DSA:2.20.200.10 108 143 9.4E-19 T 19-04-2016 ALIDE2_RS01970 ccdbc57b0780912bd5172ee1b0b6f466 481 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 19 470 3.0E-120 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 ALIDE2_RS21220 aafcbf6705b1b3fecd87cedccca63ca7 380 Pfam PF13609 Gram-negative porin 8 340 1.2E-45 T 19-04-2016 ALIDE2_RS21220 aafcbf6705b1b3fecd87cedccca63ca7 380 SUPERFAMILY SSF56935 20 380 5.5E-48 T 19-04-2016 ALIDE2_RS21220 aafcbf6705b1b3fecd87cedccca63ca7 380 PRINTS PR00184 Neisseria sp. porin signature 51 76 4.9E-5 T 19-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 ALIDE2_RS21220 aafcbf6705b1b3fecd87cedccca63ca7 380 PRINTS PR00184 Neisseria sp. porin signature 311 335 4.9E-5 T 19-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 ALIDE2_RS21220 aafcbf6705b1b3fecd87cedccca63ca7 380 Gene3D G3DSA:2.40.160.10 20 380 5.3E-62 T 19-04-2016 IPR023614 Porin domain ALIDE2_RS07440 7f118120d6ef66d624d6215a1835f43a 385 PANTHER PTHR24023:SF591 36 372 3.3E-107 T 19-04-2016 ALIDE2_RS07440 7f118120d6ef66d624d6215a1835f43a 385 Gene3D G3DSA:3.40.50.10540 5 213 7.5E-102 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07440 7f118120d6ef66d624d6215a1835f43a 385 Gene3D G3DSA:3.40.50.10540 299 384 7.5E-102 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07440 7f118120d6ef66d624d6215a1835f43a 385 PANTHER PTHR24023 36 372 3.3E-107 T 19-04-2016 ALIDE2_RS07440 7f118120d6ef66d624d6215a1835f43a 385 Gene3D G3DSA:3.30.1540.10 224 298 2.3E-5 T 19-04-2016 ALIDE2_RS07440 7f118120d6ef66d624d6215a1835f43a 385 SUPERFAMILY SSF89796 7 384 8.5E-120 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07440 7f118120d6ef66d624d6215a1835f43a 385 Pfam PF02515 CoA-transferase family III 9 360 4.2E-85 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS09060 89535cb37ea21aa1dd18fb81ac190b16 252 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 99 245 9.6E-39 T 19-04-2016 IPR021561 Transcriptional regulator, AbiEi_3 antitoxin, Type IV TA system ALIDE2_RS09060 89535cb37ea21aa1dd18fb81ac190b16 252 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 8 95 4.7E-26 T 19-04-2016 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain ALIDE2_RS08265 1fa1923cafb0e5ba7b4dd1408f69c9bf 158 Gene3D G3DSA:1.20.1260.10 1 156 3.0E-64 T 19-04-2016 IPR012347 Ferritin-related ALIDE2_RS08265 1fa1923cafb0e5ba7b4dd1408f69c9bf 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 4.7E-73 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS08265 1fa1923cafb0e5ba7b4dd1408f69c9bf 158 Pfam PF00210 Ferritin-like domain 8 143 2.1E-40 T 19-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ALIDE2_RS08265 1fa1923cafb0e5ba7b4dd1408f69c9bf 158 PIRSF PIRSF002560 1 157 9.2E-72 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS08265 1fa1923cafb0e5ba7b4dd1408f69c9bf 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS08265 1fa1923cafb0e5ba7b4dd1408f69c9bf 158 PANTHER PTHR30295:SF0 1 154 2.9E-45 T 19-04-2016 ALIDE2_RS08265 1fa1923cafb0e5ba7b4dd1408f69c9bf 158 PANTHER PTHR30295 1 154 2.9E-45 T 19-04-2016 ALIDE2_RS08265 1fa1923cafb0e5ba7b4dd1408f69c9bf 158 SUPERFAMILY SSF47240 1 156 8.34E-53 T 19-04-2016 IPR009078 Ferritin-like superfamily ALIDE2_RS08265 1fa1923cafb0e5ba7b4dd1408f69c9bf 158 PRINTS PR00601 Bacterioferritin signature 107 127 5.3E-66 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS08265 1fa1923cafb0e5ba7b4dd1408f69c9bf 158 PRINTS PR00601 Bacterioferritin signature 23 43 5.3E-66 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS08265 1fa1923cafb0e5ba7b4dd1408f69c9bf 158 PRINTS PR00601 Bacterioferritin signature 128 149 5.3E-66 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS08265 1fa1923cafb0e5ba7b4dd1408f69c9bf 158 PRINTS PR00601 Bacterioferritin signature 65 85 5.3E-66 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS08265 1fa1923cafb0e5ba7b4dd1408f69c9bf 158 PRINTS PR00601 Bacterioferritin signature 3 22 5.3E-66 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS08265 1fa1923cafb0e5ba7b4dd1408f69c9bf 158 PRINTS PR00601 Bacterioferritin signature 86 106 5.3E-66 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS08265 1fa1923cafb0e5ba7b4dd1408f69c9bf 158 PRINTS PR00601 Bacterioferritin signature 44 64 5.3E-66 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ALIDE2_RS15950 b198d40adbc633ba0193ee74576d5076 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 313 1.7E-71 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS15950 b198d40adbc633ba0193ee74576d5076 327 PANTHER PTHR30349 4 287 2.7E-70 T 19-04-2016 ALIDE2_RS15950 b198d40adbc633ba0193ee74576d5076 327 SUPERFAMILY SSF53850 108 280 1.43E-10 T 19-04-2016 ALIDE2_RS15950 b198d40adbc633ba0193ee74576d5076 327 PANTHER PTHR30349:SF16 4 287 2.7E-70 T 19-04-2016 ALIDE2_RS15950 b198d40adbc633ba0193ee74576d5076 327 PIRSF PIRSF017082 2 318 8.7E-68 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS16530 9daca7be6826b2213a8877eca7c6f1e8 597 Pfam PF07514 Putative helicase 32 340 4.1E-94 T 19-04-2016 IPR011119 Uncharacterised domain, helicase/relaxase, putative ALIDE2_RS11705 8c6b074a192a9f0e5fde81d59f1c9747 402 Gene3D G3DSA:2.140.10.20 132 393 2.7E-41 T 19-04-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain ALIDE2_RS11705 8c6b074a192a9f0e5fde81d59f1c9747 402 SUPERFAMILY SSF51004 37 400 2.62E-73 T 19-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain ALIDE2_RS11705 8c6b074a192a9f0e5fde81d59f1c9747 402 Pfam PF02239 Cytochrome D1 heme domain 37 396 5.8E-103 T 19-04-2016 ALIDE2_RS22860 549331028ffbad8b4e8a699cd8fcbe50 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 160 4.7E-54 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS22860 549331028ffbad8b4e8a699cd8fcbe50 171 Gene3D G3DSA:3.90.45.10 4 167 8.8E-64 T 19-04-2016 IPR023635 Peptide deformylase ALIDE2_RS22860 549331028ffbad8b4e8a699cd8fcbe50 171 PANTHER PTHR10458:SF10 1 168 1.2E-89 T 19-04-2016 ALIDE2_RS22860 549331028ffbad8b4e8a699cd8fcbe50 171 Pfam PF01327 Polypeptide deformylase 4 153 9.3E-51 T 19-04-2016 IPR023635 Peptide deformylase ALIDE2_RS22860 549331028ffbad8b4e8a699cd8fcbe50 171 PRINTS PR01576 Peptide deformylase signature 33 62 3.5E-35 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS22860 549331028ffbad8b4e8a699cd8fcbe50 171 PRINTS PR01576 Peptide deformylase signature 90 101 3.5E-35 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS22860 549331028ffbad8b4e8a699cd8fcbe50 171 PRINTS PR01576 Peptide deformylase signature 121 150 3.5E-35 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS22860 549331028ffbad8b4e8a699cd8fcbe50 171 PRINTS PR01576 Peptide deformylase signature 102 120 3.5E-35 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS22860 549331028ffbad8b4e8a699cd8fcbe50 171 SUPERFAMILY SSF56420 2 165 5.23E-62 T 19-04-2016 IPR023635 Peptide deformylase ALIDE2_RS22860 549331028ffbad8b4e8a699cd8fcbe50 171 PANTHER PTHR10458 1 168 1.2E-89 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS22860 549331028ffbad8b4e8a699cd8fcbe50 171 Hamap MF_00163 Peptide deformylase [def]. 2 163 30.622 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS22860 549331028ffbad8b4e8a699cd8fcbe50 171 PIRSF PIRSF004749 1 171 6.1E-55 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS01160 67c03483d2d0f09c1cdf2475b52143c3 294 PANTHER PTHR22911 1 293 2.0E-22 T 19-04-2016 ALIDE2_RS01160 67c03483d2d0f09c1cdf2475b52143c3 294 Pfam PF00892 EamA-like transporter family 7 134 3.0E-13 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS01160 67c03483d2d0f09c1cdf2475b52143c3 294 SUPERFAMILY SSF103481 194 291 1.7E-5 T 19-04-2016 ALIDE2_RS01160 67c03483d2d0f09c1cdf2475b52143c3 294 SUPERFAMILY SSF103481 46 136 6.02E-10 T 19-04-2016 ALIDE2_RS09595 95d30f378d37b2bad5c3981f391adbc5 251 Gene3D G3DSA:3.40.30.10 61 229 1.1E-28 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS09595 95d30f378d37b2bad5c3981f391adbc5 251 PANTHER PTHR13887 1 230 1.9E-12 T 19-04-2016 ALIDE2_RS09595 95d30f378d37b2bad5c3981f391adbc5 251 Pfam PF13462 Thioredoxin 61 206 4.2E-18 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS09595 95d30f378d37b2bad5c3981f391adbc5 251 SUPERFAMILY SSF52833 46 226 3.86E-30 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS09925 e7e761197ad6ad6cb1e52fb704c85f2e 265 PANTHER PTHR30043:SF1 12 263 7.2E-84 T 19-04-2016 ALIDE2_RS09925 e7e761197ad6ad6cb1e52fb704c85f2e 265 PANTHER PTHR30043 12 263 7.2E-84 T 19-04-2016 ALIDE2_RS09925 e7e761197ad6ad6cb1e52fb704c85f2e 265 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 19 264 2.3E-89 T 19-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 ALIDE2_RS09925 e7e761197ad6ad6cb1e52fb704c85f2e 265 SUPERFAMILY SSF161098 69 254 7.85E-37 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS09925 e7e761197ad6ad6cb1e52fb704c85f2e 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 262 3.4E-23 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS09925 e7e761197ad6ad6cb1e52fb704c85f2e 265 Gene3D G3DSA:1.10.3720.10 69 264 2.1E-34 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS19440 345ff48239bd7a2989683715c2b6bb42 199 Gene3D G3DSA:3.40.630.30 3 191 4.7E-56 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS19440 345ff48239bd7a2989683715c2b6bb42 199 Pfam PF13302 Acetyltransferase (GNAT) domain 15 153 1.5E-16 T 19-04-2016 IPR000182 GNAT domain GO:0008080 ALIDE2_RS19440 345ff48239bd7a2989683715c2b6bb42 199 PANTHER PTHR13256:SF20 1 195 1.1E-70 T 19-04-2016 ALIDE2_RS19440 345ff48239bd7a2989683715c2b6bb42 199 SUPERFAMILY SSF55729 5 177 4.08E-36 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS19440 345ff48239bd7a2989683715c2b6bb42 199 PANTHER PTHR13256 1 195 1.1E-70 T 19-04-2016 ALIDE2_RS14330 e448f550420455555ce159fffc0c00ba 316 PANTHER PTHR30349 3 304 1.4E-74 T 19-04-2016 ALIDE2_RS14330 e448f550420455555ce159fffc0c00ba 316 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 41 312 2.9E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS14330 e448f550420455555ce159fffc0c00ba 316 PIRSF PIRSF017082 1 315 4.3E-69 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS14330 e448f550420455555ce159fffc0c00ba 316 SUPERFAMILY SSF53850 107 276 6.51E-9 T 19-04-2016 ALIDE2_RS14330 e448f550420455555ce159fffc0c00ba 316 PANTHER PTHR30349:SF32 3 304 1.4E-74 T 19-04-2016 ALIDE2_RS15125 5bbce76f090d80bd8190e98c1b466912 249 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 13 190 6.0E-70 T 19-04-2016 IPR022301 Integral membrane protein YjbE ALIDE2_RS15125 5bbce76f090d80bd8190e98c1b466912 249 Pfam PF03741 Integral membrane protein TerC family 15 189 6.9E-45 T 19-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 ALIDE2_RS15125 5bbce76f090d80bd8190e98c1b466912 249 PANTHER PTHR30060 1 202 3.9E-41 T 19-04-2016 ALIDE2_RS07550 3a731bcbbdf5e49c282869f695b47270 277 SMART SM00346 21 111 4.3E-7 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS07550 3a731bcbbdf5e49c282869f695b47270 277 Gene3D G3DSA:1.10.10.10 17 90 7.6E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07550 3a731bcbbdf5e49c282869f695b47270 277 Gene3D G3DSA:3.30.450.40 93 271 4.4E-28 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS07550 3a731bcbbdf5e49c282869f695b47270 277 PANTHER PTHR30136:SF4 18 275 1.5E-43 T 19-04-2016 ALIDE2_RS07550 3a731bcbbdf5e49c282869f695b47270 277 Pfam PF09339 IclR helix-turn-helix domain 25 72 9.8E-14 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS07550 3a731bcbbdf5e49c282869f695b47270 277 Pfam PF01614 Bacterial transcriptional regulator 146 271 7.1E-9 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS07550 3a731bcbbdf5e49c282869f695b47270 277 PANTHER PTHR30136 18 275 1.5E-43 T 19-04-2016 ALIDE2_RS07550 3a731bcbbdf5e49c282869f695b47270 277 SUPERFAMILY SSF46785 24 93 1.39E-12 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07550 3a731bcbbdf5e49c282869f695b47270 277 SUPERFAMILY SSF55781 88 272 7.85E-27 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS07750 61dbb6e020ef1ee040cc71398773abeb 408 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 131 8.2E-16 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS07750 61dbb6e020ef1ee040cc71398773abeb 408 SUPERFAMILY SSF56645 1 263 2.88E-69 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS07750 61dbb6e020ef1ee040cc71398773abeb 408 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 238 4.3E-20 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS07750 61dbb6e020ef1ee040cc71398773abeb 408 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 250 398 3.6E-35 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS07750 61dbb6e020ef1ee040cc71398773abeb 408 SUPERFAMILY SSF47203 248 404 4.83E-43 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS07750 61dbb6e020ef1ee040cc71398773abeb 408 Gene3D G3DSA:1.10.540.10 1 134 5.5E-38 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS07750 61dbb6e020ef1ee040cc71398773abeb 408 Gene3D G3DSA:1.20.140.10 240 404 1.7E-47 T 19-04-2016 ALIDE2_RS07750 61dbb6e020ef1ee040cc71398773abeb 408 PANTHER PTHR10909 6 405 2.4E-229 T 19-04-2016 ALIDE2_RS07750 61dbb6e020ef1ee040cc71398773abeb 408 PANTHER PTHR10909:SF221 6 405 2.4E-229 T 19-04-2016 ALIDE2_RS07750 61dbb6e020ef1ee040cc71398773abeb 408 Gene3D G3DSA:2.40.110.10 135 239 4.6E-40 T 19-04-2016 ALIDE2_RS07515 92d46ae0eae0d846665eb2d60b27f76d 309 Gene3D G3DSA:3.40.190.10 189 270 6.1E-15 T 19-04-2016 ALIDE2_RS07515 92d46ae0eae0d846665eb2d60b27f76d 309 SUPERFAMILY SSF53850 98 305 4.62E-36 T 19-04-2016 ALIDE2_RS07515 92d46ae0eae0d846665eb2d60b27f76d 309 PANTHER PTHR30419 7 301 3.7E-53 T 19-04-2016 ALIDE2_RS07515 92d46ae0eae0d846665eb2d60b27f76d 309 SUPERFAMILY SSF46785 13 98 2.52E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07515 92d46ae0eae0d846665eb2d60b27f76d 309 Gene3D G3DSA:3.40.190.10 100 188 7.2E-19 T 19-04-2016 ALIDE2_RS07515 92d46ae0eae0d846665eb2d60b27f76d 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 73 1.0E-12 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS07515 92d46ae0eae0d846665eb2d60b27f76d 309 Pfam PF03466 LysR substrate binding domain 98 301 1.1E-31 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS07515 92d46ae0eae0d846665eb2d60b27f76d 309 Gene3D G3DSA:1.10.10.10 13 98 2.8E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01705 52e2bd62f855ea71e7b8c9a98210eabf 240 PANTHER PTHR12561:SF7 28 121 4.1E-15 T 19-04-2016 ALIDE2_RS01705 52e2bd62f855ea71e7b8c9a98210eabf 240 PANTHER PTHR12561:SF7 142 188 4.1E-15 T 19-04-2016 ALIDE2_RS01705 52e2bd62f855ea71e7b8c9a98210eabf 240 SUPERFAMILY SSF55681 17 230 1.49E-26 T 19-04-2016 ALIDE2_RS01705 52e2bd62f855ea71e7b8c9a98210eabf 240 Gene3D G3DSA:3.90.1550.10 25 194 2.4E-20 T 19-04-2016 ALIDE2_RS01705 52e2bd62f855ea71e7b8c9a98210eabf 240 PANTHER PTHR12561 28 121 4.1E-15 T 19-04-2016 ALIDE2_RS01705 52e2bd62f855ea71e7b8c9a98210eabf 240 PANTHER PTHR12561 142 188 4.1E-15 T 19-04-2016 ALIDE2_RS14690 523ca8ffaf3d1226b3216c5981283776 257 Pfam PF00005 ABC transporter 41 177 6.2E-22 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS14690 523ca8ffaf3d1226b3216c5981283776 257 PANTHER PTHR24220 17 246 1.0E-48 T 19-04-2016 ALIDE2_RS14690 523ca8ffaf3d1226b3216c5981283776 257 Gene3D G3DSA:3.40.50.300 11 240 7.2E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14690 523ca8ffaf3d1226b3216c5981283776 257 SMART SM00382 39 221 5.6E-5 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS14690 523ca8ffaf3d1226b3216c5981283776 257 SUPERFAMILY SSF52540 20 227 2.13E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16120 f2f2c32b11f20b048f5767e9747a9234 317 PANTHER PTHR11795 1 271 1.7E-71 T 19-04-2016 ALIDE2_RS16120 f2f2c32b11f20b048f5767e9747a9234 317 PANTHER PTHR11795 291 315 1.7E-71 T 19-04-2016 ALIDE2_RS16120 f2f2c32b11f20b048f5767e9747a9234 317 PANTHER PTHR11795:SF379 1 271 1.7E-71 T 19-04-2016 ALIDE2_RS16120 f2f2c32b11f20b048f5767e9747a9234 317 PANTHER PTHR11795:SF379 291 315 1.7E-71 T 19-04-2016 ALIDE2_RS16120 f2f2c32b11f20b048f5767e9747a9234 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 262 2.6E-36 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS02790 fbb5e744f449a6f7d4a64f4e36094c28 134 SUPERFAMILY SSF54593 4 133 5.64E-26 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS02790 fbb5e744f449a6f7d4a64f4e36094c28 134 Gene3D G3DSA:3.10.180.10 9 132 2.6E-26 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS02790 fbb5e744f449a6f7d4a64f4e36094c28 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 129 1.4E-10 T 19-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ALIDE2_RS02790 fbb5e744f449a6f7d4a64f4e36094c28 134 PANTHER PTHR21366:SF14 5 132 8.6E-37 T 19-04-2016 ALIDE2_RS02790 fbb5e744f449a6f7d4a64f4e36094c28 134 PANTHER PTHR21366 5 132 8.6E-37 T 19-04-2016 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 PIRSF PIRSF001400 1 426 1.9E-192 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 SUPERFAMILY SSF51604 140 427 2.18E-130 T 19-04-2016 IPR029065 Enolase C-terminal domain-like ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 424 7.7E-134 T 19-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 SMART SM01192 139 426 3.1E-222 T 19-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 SUPERFAMILY SSF54826 4 138 2.09E-56 T 19-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 PANTHER PTHR11902 1 428 1.8E-260 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 426 1.3E-208 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 Pfam PF03952 Enolase, N-terminal domain 4 133 8.6E-59 T 19-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 Hamap MF_00318 Enolase [eno]. 2 412 45.345 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 SMART SM01193 4 134 1.4E-94 T 19-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 Gene3D G3DSA:3.20.20.120 128 425 1.8E-137 T 19-04-2016 IPR029065 Enolase C-terminal domain-like ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 ProSitePatterns PS00164 Enolase signature. 335 348 - T 19-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 Gene3D G3DSA:3.30.390.10 4 126 9.4E-55 T 19-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 PRINTS PR00148 Enolase signature 364 381 1.9E-45 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 PRINTS PR00148 Enolase signature 161 174 1.9E-45 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 PRINTS PR00148 Enolase signature 37 51 1.9E-45 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 PRINTS PR00148 Enolase signature 312 323 1.9E-45 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 PRINTS PR00148 Enolase signature 107 123 1.9E-45 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS18815 de70bce6c50eab0144d5fa8bdee35cb4 428 PRINTS PR00148 Enolase signature 335 349 1.9E-45 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 ALIDE2_RS20955 e912ae95ed96cab0ac19e335c5d7062d 138 PANTHER PTHR30435 2 138 4.1E-34 T 19-04-2016 ALIDE2_RS20955 e912ae95ed96cab0ac19e335c5d7062d 138 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 136 4.4E-29 T 19-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 ALIDE2_RS20955 e912ae95ed96cab0ac19e335c5d7062d 138 PIRSF PIRSF002889 1 138 7.6E-37 T 19-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 ALIDE2_RS20955 e912ae95ed96cab0ac19e335c5d7062d 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 19-04-2016 IPR019776 Flagellar basal body rod protein, conserved site ALIDE2_RS20955 e912ae95ed96cab0ac19e335c5d7062d 138 PANTHER PTHR30435:SF12 2 138 4.1E-34 T 19-04-2016 ALIDE2_RS20955 e912ae95ed96cab0ac19e335c5d7062d 138 Pfam PF00460 Flagella basal body rod protein 9 38 4.4E-8 T 19-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ALIDE2_RS07195 cfece6ac5128dbb8fb71af0f70361cb5 210 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 22 206 31.597 T 19-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ALIDE2_RS07195 cfece6ac5128dbb8fb71af0f70361cb5 210 PANTHER PTHR30042:SF2 19 207 9.2E-74 T 19-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ALIDE2_RS07195 cfece6ac5128dbb8fb71af0f70361cb5 210 PANTHER PTHR30042 19 207 9.2E-74 T 19-04-2016 ALIDE2_RS07195 cfece6ac5128dbb8fb71af0f70361cb5 210 PIRSF PIRSF001296 22 210 5.6E-64 T 19-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ALIDE2_RS07195 cfece6ac5128dbb8fb71af0f70361cb5 210 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 24 205 1.9E-52 T 19-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ALIDE2_RS07195 cfece6ac5128dbb8fb71af0f70361cb5 210 Pfam PF02669 K+-transporting ATPase, c chain 27 204 4.0E-63 T 19-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ALIDE2_RS04465 13124f0a679adb58c7d30826b832ad8c 214 Pfam PF01464 Transglycosylase SLT domain 101 191 1.1E-13 T 19-04-2016 IPR008258 Transglycosylase SLT domain 1 ALIDE2_RS04465 13124f0a679adb58c7d30826b832ad8c 214 Gene3D G3DSA:1.10.530.10 90 191 2.0E-24 T 19-04-2016 ALIDE2_RS04465 13124f0a679adb58c7d30826b832ad8c 214 SUPERFAMILY SSF53955 68 201 2.85E-29 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS04465 13124f0a679adb58c7d30826b832ad8c 214 PANTHER PTHR21666 76 190 2.5E-16 T 19-04-2016 ALIDE2_RS12220 2a5bea95fdbe95c2b63e09cfa68779ce 221 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 220 9.6E-75 T 19-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 ALIDE2_RS12220 2a5bea95fdbe95c2b63e09cfa68779ce 221 Gene3D G3DSA:1.20.1050.10 91 220 2.7E-48 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS12220 2a5bea95fdbe95c2b63e09cfa68779ce 221 Gene3D G3DSA:3.40.30.10 1 90 1.1E-28 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS12220 2a5bea95fdbe95c2b63e09cfa68779ce 221 SUPERFAMILY SSF47616 81 219 8.38E-27 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like ALIDE2_RS12220 2a5bea95fdbe95c2b63e09cfa68779ce 221 SUPERFAMILY SSF52833 1 90 3.43E-24 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS12220 2a5bea95fdbe95c2b63e09cfa68779ce 221 PANTHER PTHR11260 1 221 1.9E-88 T 19-04-2016 ALIDE2_RS12220 2a5bea95fdbe95c2b63e09cfa68779ce 221 PANTHER PTHR11260:SF289 1 221 1.9E-88 T 19-04-2016 ALIDE2_RS12220 2a5bea95fdbe95c2b63e09cfa68779ce 221 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 81 7.3E-16 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ALIDE2_RS16945 49aeea0676f076477d737f2a268b43a0 105 Gene3D G3DSA:2.60.120.10 12 104 6.9E-37 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS16945 49aeea0676f076477d737f2a268b43a0 105 SUPERFAMILY SSF51182 14 104 4.16E-33 T 19-04-2016 IPR011051 RmlC-like cupin domain ALIDE2_RS16945 49aeea0676f076477d737f2a268b43a0 105 PANTHER PTHR36540:SF1 4 104 1.1E-30 T 19-04-2016 ALIDE2_RS16945 49aeea0676f076477d737f2a268b43a0 105 PANTHER PTHR36540 4 104 1.1E-30 T 19-04-2016 ALIDE2_RS16945 49aeea0676f076477d737f2a268b43a0 105 Pfam PF06865 Protein of unknown function (DUF1255) 14 104 2.5E-35 T 19-04-2016 IPR009664 Protein of unknown function DUF1255 ALIDE2_RS16945 49aeea0676f076477d737f2a268b43a0 105 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 12 105 26.398 T 19-04-2016 IPR009664 Protein of unknown function DUF1255 ALIDE2_RS12790 d67df62aa81b233e01716418a12e26c1 327 PIRSF PIRSF006470 3 327 1.2E-109 T 19-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 ALIDE2_RS12790 d67df62aa81b233e01716418a12e26c1 327 PANTHER PTHR33376 1 310 2.1E-97 T 19-04-2016 ALIDE2_RS12790 d67df62aa81b233e01716418a12e26c1 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 287 1.2E-92 T 19-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 ALIDE2_RS12790 d67df62aa81b233e01716418a12e26c1 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 309 2.4E-96 T 19-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 ALIDE2_RS12790 d67df62aa81b233e01716418a12e26c1 327 PANTHER PTHR33376:SF4 1 310 2.1E-97 T 19-04-2016 ALIDE2_RS16315 c55f813867293c9e664292b247b1100c 281 SUPERFAMILY SSF69572 16 201 4.58E-19 T 19-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ALIDE2_RS16315 c55f813867293c9e664292b247b1100c 281 Pfam PF00899 ThiF family 13 222 3.8E-17 T 19-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ALIDE2_RS16315 c55f813867293c9e664292b247b1100c 281 Gene3D G3DSA:3.40.50.720 15 205 1.6E-14 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS16315 c55f813867293c9e664292b247b1100c 281 TIGRFAM TIGR03736 PRTRC_ThiF: PRTRC system ThiF family protein 3 251 2.6E-93 T 19-04-2016 IPR022500 ParB-related, ThiF-related cassette, ThiF ALIDE2_RS16415 12558e20cb1d023f0f8258d4e87aa169 1680 SUPERFAMILY SSF52540 1250 1431 9.62E-24 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16415 12558e20cb1d023f0f8258d4e87aa169 1680 SUPERFAMILY SSF52540 1039 1122 9.62E-24 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16415 12558e20cb1d023f0f8258d4e87aa169 1680 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 208 222 2.0E-5 T 19-04-2016 ALIDE2_RS16415 12558e20cb1d023f0f8258d4e87aa169 1680 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 297 321 2.0E-5 T 19-04-2016 ALIDE2_RS16415 12558e20cb1d023f0f8258d4e87aa169 1680 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 271 283 2.0E-5 T 19-04-2016 ALIDE2_RS16415 12558e20cb1d023f0f8258d4e87aa169 1680 SMART SM00487 856 1129 0.0041 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS16415 12558e20cb1d023f0f8258d4e87aa169 1680 Gene3D G3DSA:3.40.50.150 184 376 5.2E-41 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS16415 12558e20cb1d023f0f8258d4e87aa169 1680 Gene3D G3DSA:3.40.50.300 857 968 6.6E-15 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16415 12558e20cb1d023f0f8258d4e87aa169 1680 Gene3D G3DSA:3.40.50.300 1030 1116 6.6E-15 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16415 12558e20cb1d023f0f8258d4e87aa169 1680 SUPERFAMILY SSF52540 815 970 8.39E-25 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16415 12558e20cb1d023f0f8258d4e87aa169 1680 SUPERFAMILY SSF52540 1031 1127 8.39E-25 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16415 12558e20cb1d023f0f8258d4e87aa169 1680 Gene3D G3DSA:3.40.50.300 1291 1420 1.2E-16 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16415 12558e20cb1d023f0f8258d4e87aa169 1680 SUPERFAMILY SSF53335 172 453 3.21E-34 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS10830 d45805d70e8a1dc1acdc796bf8293e51 250 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 152 234 2.7E-29 T 19-04-2016 IPR018754 Protein of unknown function DUF2285 ALIDE2_RS14235 887756bd5a069290985977fa5b047f7a 257 PANTHER PTHR10799 88 218 9.5E-25 T 19-04-2016 ALIDE2_RS14235 887756bd5a069290985977fa5b047f7a 257 Gene3D G3DSA:3.30.70.270 57 219 4.9E-50 T 19-04-2016 ALIDE2_RS14235 887756bd5a069290985977fa5b047f7a 257 SMART SM00267 43 217 8.5E-45 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS14235 887756bd5a069290985977fa5b047f7a 257 PANTHER PTHR10799:SF750 88 218 9.5E-25 T 19-04-2016 ALIDE2_RS14235 887756bd5a069290985977fa5b047f7a 257 SUPERFAMILY SSF55073 59 217 5.57E-45 T 19-04-2016 IPR029787 Nucleotide cyclase ALIDE2_RS14235 887756bd5a069290985977fa5b047f7a 257 Pfam PF00990 Diguanylate cyclase, GGDEF domain 56 213 4.7E-42 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS14235 887756bd5a069290985977fa5b047f7a 257 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 53 217 3.3E-48 T 19-04-2016 IPR000160 GGDEF domain ALIDE2_RS01115 a7bb6bdd722124547d0d12b242e4a0f7 355 Pfam PF05145 Putative ammonia monooxygenase 30 351 2.9E-78 T 19-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 ALIDE2_RS01115 a7bb6bdd722124547d0d12b242e4a0f7 355 PIRSF PIRSF038991 1 354 5.4E-78 T 19-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 ALIDE2_RS01115 a7bb6bdd722124547d0d12b242e4a0f7 355 PANTHER PTHR38457:SF1 1 353 1.0E-41 T 19-04-2016 ALIDE2_RS01115 a7bb6bdd722124547d0d12b242e4a0f7 355 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 195 351 6.1E-36 T 19-04-2016 IPR017516 AbrB duplication ALIDE2_RS01115 a7bb6bdd722124547d0d12b242e4a0f7 355 PANTHER PTHR38457 1 353 1.0E-41 T 19-04-2016 ALIDE2_RS21905 094e034a5a2284e01aec38f96a1244b7 479 Pfam PF01575 MaoC like domain 34 128 1.8E-21 T 19-04-2016 IPR002539 MaoC-like domain ALIDE2_RS21905 094e034a5a2284e01aec38f96a1244b7 479 Gene3D G3DSA:3.40.50.10750 286 444 1.9E-51 T 19-04-2016 ALIDE2_RS21905 094e034a5a2284e01aec38f96a1244b7 479 SUPERFAMILY SSF54637 20 157 6.85E-41 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS21905 094e034a5a2284e01aec38f96a1244b7 479 PANTHER PTHR13078 18 156 9.2E-44 T 19-04-2016 ALIDE2_RS21905 094e034a5a2284e01aec38f96a1244b7 479 SUPERFAMILY SSF53659 179 473 2.3E-69 T 19-04-2016 ALIDE2_RS21905 094e034a5a2284e01aec38f96a1244b7 479 Gene3D G3DSA:3.10.129.10 23 154 9.2E-48 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS21905 094e034a5a2284e01aec38f96a1244b7 479 Pfam PF01515 Phosphate acetyl/butaryl transferase 229 468 4.7E-47 T 19-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 ALIDE2_RS20890 486c1eb2bce2a0b6f7cc119eb4c26b21 1669 Gene3D G3DSA:3.90.550.10 1052 1318 2.7E-50 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS20890 486c1eb2bce2a0b6f7cc119eb4c26b21 1669 Gene3D G3DSA:3.90.550.10 883 1004 9.3E-6 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS20890 486c1eb2bce2a0b6f7cc119eb4c26b21 1669 SUPERFAMILY SSF53448 1051 1278 2.34E-45 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS20890 486c1eb2bce2a0b6f7cc119eb4c26b21 1669 SUPERFAMILY SSF53448 889 1004 5.72E-5 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS20890 486c1eb2bce2a0b6f7cc119eb4c26b21 1669 PANTHER PTHR41244 420 801 3.4E-105 T 19-04-2016 ALIDE2_RS20890 486c1eb2bce2a0b6f7cc119eb4c26b21 1669 PANTHER PTHR41244:SF1 420 801 3.4E-105 T 19-04-2016 ALIDE2_RS20890 486c1eb2bce2a0b6f7cc119eb4c26b21 1669 Pfam PF14307 Glycosyltransferase WbsX 441 779 2.8E-131 T 19-04-2016 IPR032719 Glycosyltransferase WbsX ALIDE2_RS20890 486c1eb2bce2a0b6f7cc119eb4c26b21 1669 SUPERFAMILY SSF53756 80 330 5.73E-5 T 19-04-2016 ALIDE2_RS20890 486c1eb2bce2a0b6f7cc119eb4c26b21 1669 SUPERFAMILY SSF53756 1320 1652 1.38E-7 T 19-04-2016 ALIDE2_RS20890 486c1eb2bce2a0b6f7cc119eb4c26b21 1669 Pfam PF00535 Glycosyl transferase family 2 1055 1236 9.7E-21 T 19-04-2016 IPR001173 Glycosyltransferase 2-like ALIDE2_RS20890 486c1eb2bce2a0b6f7cc119eb4c26b21 1669 Pfam PF05159 Capsule polysaccharide biosynthesis protein 211 326 3.4E-10 T 19-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 ALIDE2_RS03985 a347a43ebb56383d26fa2cbcd3c10458 515 Pfam PF05345 Putative Ig domain 343 382 9.5E-10 T 19-04-2016 IPR008009 Putative Ig ALIDE2_RS03985 a347a43ebb56383d26fa2cbcd3c10458 515 Gene3D G3DSA:2.60.40.10 341 394 4.0E-5 T 19-04-2016 IPR013783 Immunoglobulin-like fold ALIDE2_RS03985 a347a43ebb56383d26fa2cbcd3c10458 515 SUPERFAMILY SSF49313 325 384 1.73E-6 T 19-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 ALIDE2_RS03090 61d2d4c1d49c9341023c2c47efed299e 182 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 79 172 2.1E-14 T 19-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 ALIDE2_RS20680 4538e13f6082cdb1b83e22a9c539fa5f 130 SUPERFAMILY SSF103473 5 130 1.28E-6 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS20680 4538e13f6082cdb1b83e22a9c539fa5f 130 Gene3D G3DSA:1.20.1250.20 5 93 2.8E-7 T 19-04-2016 ALIDE2_RS16610 d68d65f6f2007f499ba767e08cd20b77 197 TIGRFAM TIGR02771 TraF_Ti: conjugative transfer signal peptidase TraF 39 197 6.6E-41 T 19-04-2016 IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF GO:0000746|GO:0042597 ALIDE2_RS16610 d68d65f6f2007f499ba767e08cd20b77 197 Gene3D G3DSA:2.10.109.10 159 197 3.3E-10 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS16610 d68d65f6f2007f499ba767e08cd20b77 197 Gene3D G3DSA:2.10.109.10 80 122 3.3E-10 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ALIDE2_RS16610 d68d65f6f2007f499ba767e08cd20b77 197 Pfam PF10502 Signal peptidase, peptidase S26 64 196 5.9E-17 T 19-04-2016 IPR019533 Peptidase S26 ALIDE2_RS16610 d68d65f6f2007f499ba767e08cd20b77 197 SUPERFAMILY SSF51306 67 197 1.94E-22 T 19-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C ALIDE2_RS01595 db34c0fccf3b2f1592d7d397c599b510 305 PANTHER PTHR34138:SF1 10 304 1.4E-60 T 19-04-2016 ALIDE2_RS01595 db34c0fccf3b2f1592d7d397c599b510 305 PIRSF PIRSF038471 11 295 3.1E-62 T 19-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 ALIDE2_RS01595 db34c0fccf3b2f1592d7d397c599b510 305 PANTHER PTHR34138 10 304 1.4E-60 T 19-04-2016 ALIDE2_RS01595 db34c0fccf3b2f1592d7d397c599b510 305 Pfam PF04085 rod shape-determining protein MreC 132 281 5.2E-33 T 19-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 ALIDE2_RS01595 db34c0fccf3b2f1592d7d397c599b510 305 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 21 286 7.2E-36 T 19-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 ALIDE2_RS02095 7ed2ff2813f202cc14d9e0d9f41dc708 277 PANTHER PTHR32552:SF35 1 256 3.8E-133 T 19-04-2016 ALIDE2_RS02095 7ed2ff2813f202cc14d9e0d9f41dc708 277 SUPERFAMILY SSF53098 102 261 3.79E-40 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS02095 7ed2ff2813f202cc14d9e0d9f41dc708 277 PANTHER PTHR32552 1 256 3.8E-133 T 19-04-2016 ALIDE2_RS02095 7ed2ff2813f202cc14d9e0d9f41dc708 277 Pfam PF13276 HTH-like domain 35 87 2.2E-12 T 19-04-2016 IPR025948 HTH-like domain ALIDE2_RS02095 7ed2ff2813f202cc14d9e0d9f41dc708 277 Pfam PF13683 Integrase core domain 187 253 6.6E-32 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS02095 7ed2ff2813f202cc14d9e0d9f41dc708 277 Gene3D G3DSA:3.30.420.10 101 254 3.0E-43 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS11060 d7e4028cc00f0044e9baf27f165e129a 330 PIRSF PIRSF017082 1 329 1.1E-75 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS11060 d7e4028cc00f0044e9baf27f165e129a 330 PANTHER PTHR30349:SF16 1 288 4.1E-84 T 19-04-2016 ALIDE2_RS11060 d7e4028cc00f0044e9baf27f165e129a 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 326 6.1E-84 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS11060 d7e4028cc00f0044e9baf27f165e129a 330 SUPERFAMILY SSF53850 119 289 7.76E-15 T 19-04-2016 ALIDE2_RS11060 d7e4028cc00f0044e9baf27f165e129a 330 Gene3D G3DSA:3.40.190.10 184 225 5.8E-4 T 19-04-2016 ALIDE2_RS11060 d7e4028cc00f0044e9baf27f165e129a 330 PANTHER PTHR30349 1 288 4.1E-84 T 19-04-2016 ALIDE2_RS00465 3f439a58675cb559c5c4f738b68ca89a 271 SUPERFAMILY SSF52540 1 269 2.11E-53 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00465 3f439a58675cb559c5c4f738b68ca89a 271 PANTHER PTHR13696:SF1 1 258 6.7E-85 T 19-04-2016 ALIDE2_RS00465 3f439a58675cb559c5c4f738b68ca89a 271 PIRSF PIRSF003092 1 271 1.8E-88 T 19-04-2016 IPR025501 ATP binding protein MinD ALIDE2_RS00465 3f439a58675cb559c5c4f738b68ca89a 271 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 1.2E-28 T 19-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE2_RS00465 3f439a58675cb559c5c4f738b68ca89a 271 PANTHER PTHR13696 1 258 6.7E-85 T 19-04-2016 ALIDE2_RS00465 3f439a58675cb559c5c4f738b68ca89a 271 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.6E-103 T 19-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 ALIDE2_RS00465 3f439a58675cb559c5c4f738b68ca89a 271 Gene3D G3DSA:3.40.50.300 1 248 1.2E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00240 f44256a8fd8c92649b97eb3ea913c628 413 PANTHER PTHR30097 82 406 2.7E-61 T 19-04-2016 ALIDE2_RS00240 f44256a8fd8c92649b97eb3ea913c628 413 Gene3D G3DSA:2.40.50.100 98 129 1.4E-6 T 19-04-2016 ALIDE2_RS00240 f44256a8fd8c92649b97eb3ea913c628 413 Gene3D G3DSA:2.40.50.100 203 230 1.4E-6 T 19-04-2016 ALIDE2_RS00240 f44256a8fd8c92649b97eb3ea913c628 413 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 96 387 4.9E-44 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ALIDE2_RS00240 f44256a8fd8c92649b97eb3ea913c628 413 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 83 315 6.0E-42 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS00240 f44256a8fd8c92649b97eb3ea913c628 413 SUPERFAMILY SSF111369 95 320 1.24E-18 T 19-04-2016 ALIDE2_RS00240 f44256a8fd8c92649b97eb3ea913c628 413 PANTHER PTHR30097:SF4 82 406 2.7E-61 T 19-04-2016 ALIDE2_RS16715 d27e93a7a46893dded1f08febeeabb1e 452 Gene3D G3DSA:3.60.15.10 135 255 2.2E-51 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS16715 d27e93a7a46893dded1f08febeeabb1e 452 Gene3D G3DSA:3.60.15.10 1 100 2.2E-51 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS16715 d27e93a7a46893dded1f08febeeabb1e 452 SUPERFAMILY SSF56281 1 451 1.1E-131 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS16715 d27e93a7a46893dded1f08febeeabb1e 452 SMART SM01027 247 366 3.8E-52 T 19-04-2016 IPR022712 Beta-Casp domain ALIDE2_RS16715 d27e93a7a46893dded1f08febeeabb1e 452 Pfam PF00753 Metallo-beta-lactamase superfamily 16 199 1.1E-18 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS16715 d27e93a7a46893dded1f08febeeabb1e 452 SMART SM00849 13 242 4.2E-14 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS16715 d27e93a7a46893dded1f08febeeabb1e 452 PANTHER PTHR11203:SF11 1 451 6.0E-102 T 19-04-2016 ALIDE2_RS16715 d27e93a7a46893dded1f08febeeabb1e 452 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 380 443 1.7E-12 T 19-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain ALIDE2_RS16715 d27e93a7a46893dded1f08febeeabb1e 452 PANTHER PTHR11203 1 451 6.0E-102 T 19-04-2016 ALIDE2_RS16715 d27e93a7a46893dded1f08febeeabb1e 452 Pfam PF10996 Beta-Casp domain 247 366 3.2E-26 T 19-04-2016 IPR022712 Beta-Casp domain ALIDE2_RS17665 b67833e03a97c0a289c0edd501a788f0 432 Gene3D G3DSA:3.50.50.60 351 396 4.6E-45 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS17665 b67833e03a97c0a289c0edd501a788f0 432 Gene3D G3DSA:3.50.50.60 178 259 4.6E-45 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS17665 b67833e03a97c0a289c0edd501a788f0 432 Gene3D G3DSA:3.50.50.60 25 125 4.6E-45 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS17665 b67833e03a97c0a289c0edd501a788f0 432 PANTHER PTHR13847 1 417 6.3E-95 T 19-04-2016 ALIDE2_RS17665 b67833e03a97c0a289c0edd501a788f0 432 PANTHER PTHR13847:SF190 1 417 6.3E-95 T 19-04-2016 ALIDE2_RS17665 b67833e03a97c0a289c0edd501a788f0 432 SUPERFAMILY SSF51905 351 405 4.34E-45 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS17665 b67833e03a97c0a289c0edd501a788f0 432 SUPERFAMILY SSF51905 35 260 4.34E-45 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS17665 b67833e03a97c0a289c0edd501a788f0 432 Pfam PF01266 FAD dependent oxidoreductase 36 388 1.5E-56 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS10545 0059f4f5d0bf0cc822020f9afe76e686 195 Pfam PF04366 Las17-binding protein actin regulator 108 192 1.4E-13 T 19-04-2016 IPR007461 Ysc84 actin-binding domain ALIDE2_RS02070 aefb4665e1c8ab9ee0d55d30dcd36b2b 193 Pfam PF14334 Domain of unknown function (DUF4390) 22 180 1.4E-53 T 19-04-2016 IPR025500 Protein of unknown function DUF4390 ALIDE2_RS21405 c5999c1931a0d7b56545f840008438b8 130 Gene3D G3DSA:1.10.760.10 36 129 3.7E-22 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS21405 c5999c1931a0d7b56545f840008438b8 130 PANTHER PTHR11961:SF5 39 127 1.6E-13 T 19-04-2016 ALIDE2_RS21405 c5999c1931a0d7b56545f840008438b8 130 SUPERFAMILY SSF46626 37 129 1.02E-19 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS21405 c5999c1931a0d7b56545f840008438b8 130 PANTHER PTHR11961 39 127 1.6E-13 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 ALIDE2_RS21405 c5999c1931a0d7b56545f840008438b8 130 PRINTS PR00604 Class IA and IB cytochrome C signature 85 101 7.1E-10 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 ALIDE2_RS21405 c5999c1931a0d7b56545f840008438b8 130 PRINTS PR00604 Class IA and IB cytochrome C signature 69 79 7.1E-10 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 ALIDE2_RS21405 c5999c1931a0d7b56545f840008438b8 130 PRINTS PR00604 Class IA and IB cytochrome C signature 53 68 7.1E-10 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 ALIDE2_RS21405 c5999c1931a0d7b56545f840008438b8 130 PRINTS PR00604 Class IA and IB cytochrome C signature 104 114 7.1E-10 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 ALIDE2_RS21405 c5999c1931a0d7b56545f840008438b8 130 PRINTS PR00604 Class IA and IB cytochrome C signature 40 47 7.1E-10 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 ALIDE2_RS21405 c5999c1931a0d7b56545f840008438b8 130 PRINTS PR00604 Class IA and IB cytochrome C signature 120 128 7.1E-10 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 ALIDE2_RS05765 e5e57196001e88e808483d04392060be 285 SUPERFAMILY SSF55781 67 240 2.03E-37 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS05765 e5e57196001e88e808483d04392060be 285 Pfam PF09339 IclR helix-turn-helix domain 4 51 2.1E-10 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS05765 e5e57196001e88e808483d04392060be 285 Gene3D G3DSA:3.30.450.40 67 241 4.4E-41 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS05765 e5e57196001e88e808483d04392060be 285 Pfam PF01614 Bacterial transcriptional regulator 123 237 1.2E-18 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS05765 e5e57196001e88e808483d04392060be 285 PANTHER PTHR30136 1 251 2.6E-51 T 19-04-2016 ALIDE2_RS05765 e5e57196001e88e808483d04392060be 285 SUPERFAMILY SSF46785 2 73 4.36E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05765 e5e57196001e88e808483d04392060be 285 SMART SM00346 2 91 1.4E-20 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS05765 e5e57196001e88e808483d04392060be 285 Gene3D G3DSA:1.10.10.10 2 62 2.0E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS10390 7b00027e3a43afe848586bc63cd31a77 88 SUPERFAMILY SSF47598 2 79 6.67E-22 T 19-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 ALIDE2_RS10390 7b00027e3a43afe848586bc63cd31a77 88 Pfam PF08681 Protein of unknown function (DUF1778) 6 80 1.0E-25 T 19-04-2016 IPR014795 Vibrio phage ICP1, Orf50 ALIDE2_RS10390 7b00027e3a43afe848586bc63cd31a77 88 Gene3D G3DSA:1.20.5.780 4 81 3.9E-20 T 19-04-2016 ALIDE2_RS10390 7b00027e3a43afe848586bc63cd31a77 88 PANTHER PTHR35401 6 87 1.5E-25 T 19-04-2016 ALIDE2_RS10390 7b00027e3a43afe848586bc63cd31a77 88 PANTHER PTHR35401:SF1 6 87 1.5E-25 T 19-04-2016 ALIDE2_RS14070 6287e386c5a09a5f5e9f64217d265ac2 443 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 264 442 2.2E-84 T 19-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 ALIDE2_RS14070 6287e386c5a09a5f5e9f64217d265ac2 443 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 16 263 3.8E-109 T 19-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 ALIDE2_RS14070 6287e386c5a09a5f5e9f64217d265ac2 443 Gene3D G3DSA:3.20.20.60 13 425 4.0E-166 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS14070 6287e386c5a09a5f5e9f64217d265ac2 443 PIRSF PIRSF001362 7 443 7.5E-215 T 19-04-2016 ALIDE2_RS14070 6287e386c5a09a5f5e9f64217d265ac2 443 Pfam PF00463 Isocitrate lyase family 20 263 2.6E-62 T 19-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 ALIDE2_RS14070 6287e386c5a09a5f5e9f64217d265ac2 443 Pfam PF00463 Isocitrate lyase family 264 442 7.9E-51 T 19-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 ALIDE2_RS14070 6287e386c5a09a5f5e9f64217d265ac2 443 ProSitePatterns PS00161 Isocitrate lyase signature. 201 206 - T 19-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 ALIDE2_RS14070 6287e386c5a09a5f5e9f64217d265ac2 443 SUPERFAMILY SSF51621 13 442 2.06E-151 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS14070 6287e386c5a09a5f5e9f64217d265ac2 443 PANTHER PTHR21631 8 443 2.4E-165 T 19-04-2016 ALIDE2_RS01980 9524706d132360a99e1596fdcc8ae7a4 426 PANTHER PTHR30158:SF3 9 418 9.4E-151 T 19-04-2016 ALIDE2_RS01980 9524706d132360a99e1596fdcc8ae7a4 426 Gene3D G3DSA:2.40.50.100 81 114 3.7E-21 T 19-04-2016 ALIDE2_RS01980 9524706d132360a99e1596fdcc8ae7a4 426 Gene3D G3DSA:2.40.50.100 189 224 3.7E-21 T 19-04-2016 ALIDE2_RS01980 9524706d132360a99e1596fdcc8ae7a4 426 PANTHER PTHR30158 9 418 9.4E-151 T 19-04-2016 ALIDE2_RS01980 9524706d132360a99e1596fdcc8ae7a4 426 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 383 8.9E-81 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ALIDE2_RS01980 9524706d132360a99e1596fdcc8ae7a4 426 Pfam PF00529 HlyD membrane-fusion protein of T1SS 54 376 1.9E-9 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ALIDE2_RS01980 9524706d132360a99e1596fdcc8ae7a4 426 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 77 310 1.3E-10 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS01980 9524706d132360a99e1596fdcc8ae7a4 426 SUPERFAMILY SSF111369 69 316 7.72E-81 T 19-04-2016 ALIDE2_RS23040 7d6c59d1601239f682896fdc484cde68 705 Pfam PF00593 TonB dependent receptor 452 704 5.1E-30 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS23040 7d6c59d1601239f682896fdc484cde68 705 SUPERFAMILY SSF56935 59 705 7.33E-90 T 19-04-2016 ALIDE2_RS23040 7d6c59d1601239f682896fdc484cde68 705 Gene3D G3DSA:2.40.170.20 174 705 3.8E-72 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS23040 7d6c59d1601239f682896fdc484cde68 705 Gene3D G3DSA:2.170.130.10 50 173 2.2E-15 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS23040 7d6c59d1601239f682896fdc484cde68 705 PANTHER PTHR32552 1 705 1.3E-208 T 19-04-2016 ALIDE2_RS23040 7d6c59d1601239f682896fdc484cde68 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 171 4.5E-12 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS23040 7d6c59d1601239f682896fdc484cde68 705 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 72 705 1.1E-242 T 19-04-2016 IPR010100 TonB-dependent copper receptor ALIDE2_RS23040 7d6c59d1601239f682896fdc484cde68 705 PANTHER PTHR32552:SF12 1 705 1.3E-208 T 19-04-2016 ALIDE2_RS10325 8f4790a6e3e529c5395b6a173138d0df 459 SUPERFAMILY SSF53041 11 166 4.71E-38 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS10325 8f4790a6e3e529c5395b6a173138d0df 459 Gene3D G3DSA:3.40.50.1390 12 147 1.3E-34 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS10325 8f4790a6e3e529c5395b6a173138d0df 459 PANTHER PTHR30461 12 335 2.4E-51 T 19-04-2016 ALIDE2_RS10325 8f4790a6e3e529c5395b6a173138d0df 459 Pfam PF07508 Recombinase 187 283 6.0E-14 T 19-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 ALIDE2_RS10325 8f4790a6e3e529c5395b6a173138d0df 459 PANTHER PTHR30461:SF3 12 335 2.4E-51 T 19-04-2016 ALIDE2_RS10325 8f4790a6e3e529c5395b6a173138d0df 459 SMART SM00857 13 166 1.1E-59 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS10325 8f4790a6e3e529c5395b6a173138d0df 459 Pfam PF00239 Resolvase, N terminal domain 14 165 3.2E-40 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS04625 0b38f18fe3e82fd3d4281874036ea1d9 241 SUPERFAMILY SSF55620 21 238 1.11E-65 T 19-04-2016 ALIDE2_RS04625 0b38f18fe3e82fd3d4281874036ea1d9 241 PANTHER PTHR11109 83 241 1.7E-38 T 19-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 ALIDE2_RS04625 0b38f18fe3e82fd3d4281874036ea1d9 241 Gene3D G3DSA:1.10.286.10 55 100 1.3E-12 T 19-04-2016 ALIDE2_RS04625 0b38f18fe3e82fd3d4281874036ea1d9 241 Gene3D G3DSA:3.30.1130.10 109 238 3.7E-42 T 19-04-2016 ALIDE2_RS04625 0b38f18fe3e82fd3d4281874036ea1d9 241 Pfam PF01227 GTP cyclohydrolase I 58 237 2.2E-53 T 19-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 ALIDE2_RS08420 7c7d2f346898f07ac89c4f82213cb7f7 329 PANTHER PTHR30349 14 291 1.2E-82 T 19-04-2016 ALIDE2_RS08420 7c7d2f346898f07ac89c4f82213cb7f7 329 PANTHER PTHR30349:SF32 14 291 1.2E-82 T 19-04-2016 ALIDE2_RS08420 7c7d2f346898f07ac89c4f82213cb7f7 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 325 4.4E-84 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS08420 7c7d2f346898f07ac89c4f82213cb7f7 329 SUPERFAMILY SSF53850 95 283 1.47E-15 T 19-04-2016 ALIDE2_RS08420 7c7d2f346898f07ac89c4f82213cb7f7 329 PIRSF PIRSF017082 2 327 1.3E-71 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS11760 98636f939179a2eb9a13fedd0903d5e9 364 PANTHER PTHR33529 1 355 3.7E-58 T 19-04-2016 ALIDE2_RS11760 98636f939179a2eb9a13fedd0903d5e9 364 SUPERFAMILY SSF103473 14 143 5.23E-6 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS11760 98636f939179a2eb9a13fedd0903d5e9 364 SUPERFAMILY SSF103473 241 353 5.23E-6 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS11760 98636f939179a2eb9a13fedd0903d5e9 364 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 345 7.3E-54 T 19-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 ALIDE2_RS11760 98636f939179a2eb9a13fedd0903d5e9 364 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 5.6E-111 T 19-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 ALIDE2_RS11760 98636f939179a2eb9a13fedd0903d5e9 364 PANTHER PTHR33529:SF2 1 355 3.7E-58 T 19-04-2016 ALIDE2_RS09735 59c1db73d80ee3ca4e51ce40c59c6c18 91 Gene3D G3DSA:3.30.70.100 21 88 2.3E-23 T 19-04-2016 ALIDE2_RS09735 59c1db73d80ee3ca4e51ce40c59c6c18 91 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 19-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 ALIDE2_RS09735 59c1db73d80ee3ca4e51ce40c59c6c18 91 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 90 8.7E-44 T 19-04-2016 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 ALIDE2_RS09735 59c1db73d80ee3ca4e51ce40c59c6c18 91 SUPERFAMILY SSF55008 17 88 8.51E-22 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS09735 59c1db73d80ee3ca4e51ce40c59c6c18 91 Pfam PF00403 Heavy-metal-associated domain 25 85 2.6E-17 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS09735 59c1db73d80ee3ca4e51ce40c59c6c18 91 PRINTS PR00946 Mercury scavenger protein signature 47 62 3.6E-55 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS09735 59c1db73d80ee3ca4e51ce40c59c6c18 91 PRINTS PR00946 Mercury scavenger protein signature 76 90 3.6E-55 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS09735 59c1db73d80ee3ca4e51ce40c59c6c18 91 PRINTS PR00946 Mercury scavenger protein signature 2 20 3.6E-55 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS09735 59c1db73d80ee3ca4e51ce40c59c6c18 91 PRINTS PR00946 Mercury scavenger protein signature 31 47 3.6E-55 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS09735 59c1db73d80ee3ca4e51ce40c59c6c18 91 PRINTS PR00946 Mercury scavenger protein signature 62 76 3.6E-55 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS09735 59c1db73d80ee3ca4e51ce40c59c6c18 91 PRINTS PR00946 Mercury scavenger protein signature 20 31 3.6E-55 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS12455 e17b0c183079560dd76b9176dff83e71 112 Pfam PF01022 Bacterial regulatory protein, arsR family 22 65 1.1E-13 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS12455 e17b0c183079560dd76b9176dff83e71 112 SUPERFAMILY SSF46785 6 90 1.64E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12455 e17b0c183079560dd76b9176dff83e71 112 SMART SM00418 14 91 6.2E-24 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS12455 e17b0c183079560dd76b9176dff83e71 112 PANTHER PTHR33154 2 104 1.5E-26 T 19-04-2016 ALIDE2_RS12455 e17b0c183079560dd76b9176dff83e71 112 Gene3D G3DSA:1.10.10.10 2 92 7.3E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS12455 e17b0c183079560dd76b9176dff83e71 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 6.2E-12 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS12455 e17b0c183079560dd76b9176dff83e71 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 6.2E-12 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS12455 e17b0c183079560dd76b9176dff83e71 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 6.2E-12 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS03555 a5c156ad13259edcad977917d70fcd16 252 Pfam PF13448 Domain of unknown function (DUF4114) 130 220 2.6E-13 T 19-04-2016 IPR025193 Domain of unknown function DUF4114 ALIDE2_RS03555 a5c156ad13259edcad977917d70fcd16 252 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 224 248 5.7E-7 T 19-04-2016 IPR013424 PEP-CTERM protein-sorting domain ALIDE2_RS03555 a5c156ad13259edcad977917d70fcd16 252 Pfam PF07589 PEP-CTERM motif 224 246 5.2E-7 T 19-04-2016 IPR013424 PEP-CTERM protein-sorting domain ALIDE2_RS08615 0bf3442b7b58b91e0bc210f7a6f3a3ad 202 Gene3D G3DSA:1.10.357.10 64 200 4.3E-28 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS08615 0bf3442b7b58b91e0bc210f7a6f3a3ad 202 SUPERFAMILY SSF48498 84 199 1.44E-24 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS08615 0bf3442b7b58b91e0bc210f7a6f3a3ad 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 62 1.6E-9 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS08615 0bf3442b7b58b91e0bc210f7a6f3a3ad 202 PANTHER PTHR30055 1 198 8.8E-31 T 19-04-2016 ALIDE2_RS08615 0bf3442b7b58b91e0bc210f7a6f3a3ad 202 SUPERFAMILY SSF46689 4 87 1.1E-13 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS08615 0bf3442b7b58b91e0bc210f7a6f3a3ad 202 Pfam PF08359 YsiA-like protein, C-terminal region 72 193 4.8E-6 T 19-04-2016 IPR013570 Transcription regulator YsiA, C-terminal ALIDE2_RS08615 0bf3442b7b58b91e0bc210f7a6f3a3ad 202 Gene3D G3DSA:1.10.10.60 11 63 1.6E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS01070 049ae8102b1b0d18b6c2066f0b48be44 112 PANTHER PTHR30115:SF12 1 112 3.6E-71 T 19-04-2016 ALIDE2_RS01070 049ae8102b1b0d18b6c2066f0b48be44 112 Gene3D G3DSA:3.30.70.120 1 112 1.6E-50 T 19-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ALIDE2_RS01070 049ae8102b1b0d18b6c2066f0b48be44 112 SUPERFAMILY SSF54913 1 112 1.24E-45 T 19-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta ALIDE2_RS01070 049ae8102b1b0d18b6c2066f0b48be44 112 PRINTS PR00340 P-II protein signature 52 75 2.0E-43 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS01070 049ae8102b1b0d18b6c2066f0b48be44 112 PRINTS PR00340 P-II protein signature 2 17 2.0E-43 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS01070 049ae8102b1b0d18b6c2066f0b48be44 112 PRINTS PR00340 P-II protein signature 83 103 2.0E-43 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS01070 049ae8102b1b0d18b6c2066f0b48be44 112 PRINTS PR00340 P-II protein signature 23 41 2.0E-43 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS01070 049ae8102b1b0d18b6c2066f0b48be44 112 PANTHER PTHR30115 1 112 3.6E-71 T 19-04-2016 ALIDE2_RS01070 049ae8102b1b0d18b6c2066f0b48be44 112 SMART SM00938 4 105 2.7E-66 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS01070 049ae8102b1b0d18b6c2066f0b48be44 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 19-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 ALIDE2_RS01070 049ae8102b1b0d18b6c2066f0b48be44 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 19-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 ALIDE2_RS01070 049ae8102b1b0d18b6c2066f0b48be44 112 PIRSF PIRSF039144 1 112 3.9E-54 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS01070 049ae8102b1b0d18b6c2066f0b48be44 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.0E-42 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS12590 54cc59f31e65eae5662dd50d038bc6d2 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS12590 54cc59f31e65eae5662dd50d038bc6d2 264 SUPERFAMILY SSF52540 2 235 8.04E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12590 54cc59f31e65eae5662dd50d038bc6d2 264 Gene3D G3DSA:3.40.50.300 1 235 3.0E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS12590 54cc59f31e65eae5662dd50d038bc6d2 264 SMART SM00382 31 225 2.8E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS12590 54cc59f31e65eae5662dd50d038bc6d2 264 PANTHER PTHR24220:SF534 3 251 2.3E-124 T 19-04-2016 ALIDE2_RS12590 54cc59f31e65eae5662dd50d038bc6d2 264 Pfam PF00005 ABC transporter 22 177 4.0E-25 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS12590 54cc59f31e65eae5662dd50d038bc6d2 264 PANTHER PTHR24220 3 251 2.3E-124 T 19-04-2016 ALIDE2_RS16030 2b2b44b0ad71d47b6f5167cd1f7fdeab 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 73 2.5E-20 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS16030 2b2b44b0ad71d47b6f5167cd1f7fdeab 220 SUPERFAMILY SSF46689 14 89 1.35E-20 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS16030 2b2b44b0ad71d47b6f5167cd1f7fdeab 220 Pfam PF16859 Bacterial transcriptional repressor C-terminal 112 182 8.8E-12 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS16030 2b2b44b0ad71d47b6f5167cd1f7fdeab 220 Gene3D G3DSA:1.10.357.10 70 219 1.1E-24 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS16030 2b2b44b0ad71d47b6f5167cd1f7fdeab 220 SUPERFAMILY SSF48498 94 216 1.71E-19 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS16030 2b2b44b0ad71d47b6f5167cd1f7fdeab 220 PANTHER PTHR30055 8 183 1.8E-30 T 19-04-2016 ALIDE2_RS16030 2b2b44b0ad71d47b6f5167cd1f7fdeab 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 8.7E-13 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS16030 2b2b44b0ad71d47b6f5167cd1f7fdeab 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 8.7E-13 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS16030 2b2b44b0ad71d47b6f5167cd1f7fdeab 220 Gene3D G3DSA:1.10.10.60 15 69 7.2E-24 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS17610 9dbdc36953a8b60ab4b481255d8ab3a5 299 PANTHER PTHR30465 8 298 8.6E-101 T 19-04-2016 ALIDE2_RS17610 9dbdc36953a8b60ab4b481255d8ab3a5 299 PANTHER PTHR30465:SF67 8 298 8.6E-101 T 19-04-2016 ALIDE2_RS17610 9dbdc36953a8b60ab4b481255d8ab3a5 299 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 10 64 1.2E-8 T 19-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ALIDE2_RS17610 9dbdc36953a8b60ab4b481255d8ab3a5 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 298 5.3E-34 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17610 9dbdc36953a8b60ab4b481255d8ab3a5 299 SUPERFAMILY SSF161098 89 280 2.09E-30 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17610 9dbdc36953a8b60ab4b481255d8ab3a5 299 Gene3D G3DSA:1.10.3720.10 89 294 1.1E-33 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS11155 100a3c56ada07617ca27ac7a438612c1 148 Pfam PF01925 Sulfite exporter TauE/SafE 3 148 2.9E-16 T 19-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 ALIDE2_RS11245 cf28ea019a456354f834c7a3f0ebc0a3 373 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 8 210 38.03 T 19-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 ALIDE2_RS11245 cf28ea019a456354f834c7a3f0ebc0a3 373 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 15 204 2.7E-81 T 19-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 ALIDE2_RS11245 cf28ea019a456354f834c7a3f0ebc0a3 373 SUPERFAMILY SSF55821 8 209 2.52E-84 T 19-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain ALIDE2_RS11245 cf28ea019a456354f834c7a3f0ebc0a3 373 PANTHER PTHR21327:SF6 10 371 4.9E-141 T 19-04-2016 ALIDE2_RS11245 cf28ea019a456354f834c7a3f0ebc0a3 373 PIRSF PIRSF001259 9 373 6.0E-118 T 19-04-2016 ALIDE2_RS11245 cf28ea019a456354f834c7a3f0ebc0a3 373 SUPERFAMILY SSF142695 211 371 1.22E-43 T 19-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 ALIDE2_RS11245 cf28ea019a456354f834c7a3f0ebc0a3 373 PANTHER PTHR21327 10 371 4.9E-141 T 19-04-2016 ALIDE2_RS11245 cf28ea019a456354f834c7a3f0ebc0a3 373 Pfam PF00925 GTP cyclohydrolase II 218 371 7.5E-36 T 19-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 ALIDE2_RS11245 cf28ea019a456354f834c7a3f0ebc0a3 373 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 11 206 1.2E-71 T 19-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 ALIDE2_RS11245 cf28ea019a456354f834c7a3f0ebc0a3 373 Gene3D G3DSA:3.90.870.10 8 215 1.4E-96 T 19-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain ALIDE2_RS21270 3a073cd51a644b05a71067a2d517e7bd 224 Pfam PF03737 Demethylmenaquinone methyltransferase 27 173 1.4E-43 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS21270 3a073cd51a644b05a71067a2d517e7bd 224 PANTHER PTHR33254:SF5 1 220 3.2E-59 T 19-04-2016 ALIDE2_RS21270 3a073cd51a644b05a71067a2d517e7bd 224 Gene3D G3DSA:3.50.30.40 25 181 1.4E-50 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS21270 3a073cd51a644b05a71067a2d517e7bd 224 PANTHER PTHR33254 1 220 3.2E-59 T 19-04-2016 ALIDE2_RS21270 3a073cd51a644b05a71067a2d517e7bd 224 SUPERFAMILY SSF89562 24 184 1.12E-45 T 19-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ALIDE2_RS10360 896b9fb630d36bce403176e4b79f2af1 308 Pfam PF04960 Glutaminase 27 308 6.8E-103 T 19-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 ALIDE2_RS10360 896b9fb630d36bce403176e4b79f2af1 308 SUPERFAMILY SSF56601 22 308 1.46E-96 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS10360 896b9fb630d36bce403176e4b79f2af1 308 PANTHER PTHR12544 27 308 1.1E-110 T 19-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 ALIDE2_RS10360 896b9fb630d36bce403176e4b79f2af1 308 Gene3D G3DSA:3.40.710.10 19 308 2.0E-106 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like ALIDE2_RS10360 896b9fb630d36bce403176e4b79f2af1 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 19 308 7.0E-111 T 19-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 ALIDE2_RS10360 896b9fb630d36bce403176e4b79f2af1 308 Hamap MF_00313 Glutaminase [glsA]. 9 308 41.876 T 19-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 ALIDE2_RS07390 bb42d3e120756d369ea17695caa6fc5e 390 SUPERFAMILY SSF53822 30 363 1.59E-65 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS07390 bb42d3e120756d369ea17695caa6fc5e 390 PANTHER PTHR30483 1 370 6.7E-57 T 19-04-2016 ALIDE2_RS07390 bb42d3e120756d369ea17695caa6fc5e 390 Gene3D G3DSA:3.40.50.2300 169 311 1.8E-22 T 19-04-2016 ALIDE2_RS07390 bb42d3e120756d369ea17695caa6fc5e 390 Pfam PF13458 Periplasmic binding protein 31 376 2.9E-63 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS07390 bb42d3e120756d369ea17695caa6fc5e 390 Gene3D G3DSA:3.40.50.2300 312 359 5.4E-27 T 19-04-2016 ALIDE2_RS07390 bb42d3e120756d369ea17695caa6fc5e 390 Gene3D G3DSA:3.40.50.2300 28 158 5.4E-27 T 19-04-2016 ALIDE2_RS02760 2d4bd484e3b9cdc6de45b87856b091d6 204 Pfam PF13590 Domain of unknown function (DUF4136) 34 187 2.6E-8 T 19-04-2016 IPR025411 Domain of unknown function DUF4136 ALIDE2_RS09470 e71705735daba149903dc26137abd1e2 184 Pfam PF12101 Protein of unknown function (DUF3577) 4 132 9.9E-59 T 19-04-2016 IPR021960 Protein of unknown function DUF3577 ALIDE2_RS11330 1aefb479a60038cc624eacc3520b50a2 308 Pfam PF02272 DHHA1 domain 256 302 2.8E-6 T 19-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 ALIDE2_RS11330 1aefb479a60038cc624eacc3520b50a2 308 SUPERFAMILY SSF64182 20 302 3.03E-26 T 19-04-2016 ALIDE2_RS15945 d219dc9653148ec403c5e1519788644c 266 SUPERFAMILY SSF51735 1 262 3.56E-74 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS15945 d219dc9653148ec403c5e1519788644c 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 1.9E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15945 d219dc9653148ec403c5e1519788644c 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.9E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15945 d219dc9653148ec403c5e1519788644c 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.9E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15945 d219dc9653148ec403c5e1519788644c 266 Gene3D G3DSA:3.40.50.720 1 262 1.1E-77 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS15945 d219dc9653148ec403c5e1519788644c 266 PANTHER PTHR24321:SF6 3 262 1.2E-55 T 19-04-2016 ALIDE2_RS15945 d219dc9653148ec403c5e1519788644c 266 PANTHER PTHR24321 3 262 1.2E-55 T 19-04-2016 ALIDE2_RS15945 d219dc9653148ec403c5e1519788644c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 4.6E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15945 d219dc9653148ec403c5e1519788644c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 4.6E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15945 d219dc9653148ec403c5e1519788644c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 4.6E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15945 d219dc9653148ec403c5e1519788644c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 4.6E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15945 d219dc9653148ec403c5e1519788644c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 4.6E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS15945 d219dc9653148ec403c5e1519788644c 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 261 1.5E-61 T 19-04-2016 ALIDE2_RS21740 063206b771f8e1019111844de6bd54bb 343 Pfam PF00591 Glycosyl transferase family, a/b domain 77 327 4.5E-96 T 19-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 ALIDE2_RS21740 063206b771f8e1019111844de6bd54bb 343 SUPERFAMILY SSF47648 3 70 3.27E-16 T 19-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain ALIDE2_RS21740 063206b771f8e1019111844de6bd54bb 343 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 7.2E-12 T 19-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain ALIDE2_RS21740 063206b771f8e1019111844de6bd54bb 343 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 6 336 37.633 T 19-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 ALIDE2_RS21740 063206b771f8e1019111844de6bd54bb 343 Gene3D G3DSA:1.20.970.10 5 70 3.3E-25 T 19-04-2016 ALIDE2_RS21740 063206b771f8e1019111844de6bd54bb 343 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 335 4.3E-125 T 19-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 ALIDE2_RS21740 063206b771f8e1019111844de6bd54bb 343 Gene3D G3DSA:3.40.1030.10 76 338 1.3E-109 T 19-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 ALIDE2_RS21740 063206b771f8e1019111844de6bd54bb 343 SUPERFAMILY SSF52418 77 339 6.02E-99 T 19-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 ALIDE2_RS21740 063206b771f8e1019111844de6bd54bb 343 PANTHER PTHR11922:SF5 1 339 9.5E-114 T 19-04-2016 ALIDE2_RS21740 063206b771f8e1019111844de6bd54bb 343 PANTHER PTHR11922 1 339 9.5E-114 T 19-04-2016 ALIDE2_RS18230 d874ab4e4583b9f9c222c675a243aa3b 437 PANTHER PTHR10120 12 431 1.3E-116 T 19-04-2016 ALIDE2_RS18230 d874ab4e4583b9f9c222c675a243aa3b 437 Gene3D G3DSA:3.30.2010.10 212 302 1.2E-20 T 19-04-2016 ALIDE2_RS18230 d874ab4e4583b9f9c222c675a243aa3b 437 Pfam PF01435 Peptidase family M48 220 431 3.6E-33 T 19-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ALIDE2_RS18230 d874ab4e4583b9f9c222c675a243aa3b 437 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 37 215 2.4E-56 T 19-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 ALIDE2_RS18230 d874ab4e4583b9f9c222c675a243aa3b 437 PANTHER PTHR10120:SF24 12 431 1.3E-116 T 19-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 ALIDE2_RS21250 71ba21522e8973324377bf8a3be43391 137 SMART SM00091 9 75 7.8E-8 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS21250 71ba21522e8973324377bf8a3be43391 137 Pfam PF00989 PAS fold 12 121 1.6E-14 T 19-04-2016 IPR013767 PAS fold GO:0006355 ALIDE2_RS21250 71ba21522e8973324377bf8a3be43391 137 Gene3D G3DSA:3.30.450.20 12 121 2.7E-21 T 19-04-2016 ALIDE2_RS21250 71ba21522e8973324377bf8a3be43391 137 SUPERFAMILY SSF55785 20 134 2.09E-24 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS21250 71ba21522e8973324377bf8a3be43391 137 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 130 2.4E-23 T 19-04-2016 IPR000014 PAS domain ALIDE2_RS21250 71ba21522e8973324377bf8a3be43391 137 SMART SM00086 83 125 6.4E-4 T 19-04-2016 IPR001610 PAC motif ALIDE2_RS17300 109d29566f4004e32411eed7213e7dd4 616 SMART SM00631 134 341 5.3E-4 T 19-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ALIDE2_RS17300 109d29566f4004e32411eed7213e7dd4 616 Gene3D G3DSA:3.40.630.10 119 413 5.9E-47 T 19-04-2016 ALIDE2_RS17300 109d29566f4004e32411eed7213e7dd4 616 SUPERFAMILY SSF53187 134 396 1.29E-39 T 19-04-2016 ALIDE2_RS17300 109d29566f4004e32411eed7213e7dd4 616 Pfam PF00246 Zinc carboxypeptidase 141 290 1.1E-15 T 19-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ALIDE2_RS03775 5e8def4a96bae817acb279638e7eb57f 188 SMART SM00855 3 156 1.8E-6 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ALIDE2_RS03775 5e8def4a96bae817acb279638e7eb57f 188 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 157 4.5E-21 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ALIDE2_RS03775 5e8def4a96bae817acb279638e7eb57f 188 SUPERFAMILY SSF53254 3 165 9.21E-28 T 19-04-2016 IPR029033 Histidine phosphatase superfamily ALIDE2_RS03775 5e8def4a96bae817acb279638e7eb57f 188 Gene3D G3DSA:3.40.50.1240 2 157 6.7E-23 T 19-04-2016 IPR029033 Histidine phosphatase superfamily ALIDE2_RS05025 06913ca8fd68a4dff1aaab8b693d3039 508 Pfam PF07171 MlrC C-terminus 302 483 2.2E-55 T 19-04-2016 IPR010799 Microcystin LR degradation protein MlrC, C-terminal ALIDE2_RS05025 06913ca8fd68a4dff1aaab8b693d3039 508 PIRSF PIRSF012702 1 503 3.7E-172 T 19-04-2016 IPR009197 Microcystin LR degradation protein MlrC ALIDE2_RS05025 06913ca8fd68a4dff1aaab8b693d3039 508 Pfam PF07364 Metallopeptidase family M81 2 292 4.7E-87 T 19-04-2016 IPR015995 Microcystin LR degradation protein MlrC, N-terminal ALIDE2_RS23465 f613fe40a7ef60f4fd076c1a447c3973 301 Pfam PF03466 LysR substrate binding domain 90 293 8.5E-33 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS23465 f613fe40a7ef60f4fd076c1a447c3973 301 Gene3D G3DSA:3.40.190.10 190 266 1.7E-10 T 19-04-2016 ALIDE2_RS23465 f613fe40a7ef60f4fd076c1a447c3973 301 Gene3D G3DSA:1.10.10.10 1 86 4.9E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23465 f613fe40a7ef60f4fd076c1a447c3973 301 SUPERFAMILY SSF46785 1 80 8.71E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23465 f613fe40a7ef60f4fd076c1a447c3973 301 PANTHER PTHR30427 1 293 4.2E-60 T 19-04-2016 ALIDE2_RS23465 f613fe40a7ef60f4fd076c1a447c3973 301 SUPERFAMILY SSF53850 90 295 6.02E-32 T 19-04-2016 ALIDE2_RS23465 f613fe40a7ef60f4fd076c1a447c3973 301 PANTHER PTHR30427:SF1 1 293 4.2E-60 T 19-04-2016 ALIDE2_RS23465 f613fe40a7ef60f4fd076c1a447c3973 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.3E-17 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS23465 f613fe40a7ef60f4fd076c1a447c3973 301 Gene3D G3DSA:3.40.190.10 90 189 6.0E-19 T 19-04-2016 ALIDE2_RS06915 39098befddf3a820e35a0794a2193dce 474 PANTHER PTHR30469 13 406 6.4E-134 T 19-04-2016 ALIDE2_RS06915 39098befddf3a820e35a0794a2193dce 474 SUPERFAMILY SSF111369 85 323 2.09E-54 T 19-04-2016 ALIDE2_RS06915 39098befddf3a820e35a0794a2193dce 474 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 71 395 2.6E-72 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ALIDE2_RS06915 39098befddf3a820e35a0794a2193dce 474 PANTHER PTHR30469:SF12 13 406 6.4E-134 T 19-04-2016 IPR022824 Multidrug resistance protein MdtA ALIDE2_RS06915 39098befddf3a820e35a0794a2193dce 474 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 87 318 3.1E-15 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS06915 39098befddf3a820e35a0794a2193dce 474 Gene3D G3DSA:2.40.50.100 97 129 3.4E-21 T 19-04-2016 ALIDE2_RS06915 39098befddf3a820e35a0794a2193dce 474 Gene3D G3DSA:2.40.50.100 204 238 3.4E-21 T 19-04-2016 ALIDE2_RS11225 3ec031b020f54c69190a2aad2bfcc3a1 140 PANTHER PTHR31793 1 137 1.3E-38 T 19-04-2016 ALIDE2_RS11225 3ec031b020f54c69190a2aad2bfcc3a1 140 SUPERFAMILY SSF54637 1 138 2.07E-36 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS11225 3ec031b020f54c69190a2aad2bfcc3a1 140 PANTHER PTHR31793:SF9 1 137 1.3E-38 T 19-04-2016 ALIDE2_RS11225 3ec031b020f54c69190a2aad2bfcc3a1 140 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 5 99 4.9E-28 T 19-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ALIDE2_RS11225 3ec031b020f54c69190a2aad2bfcc3a1 140 Pfam PF03061 Thioesterase superfamily 16 93 4.0E-18 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS11225 3ec031b020f54c69190a2aad2bfcc3a1 140 PIRSF PIRSF003230 1 140 2.0E-38 T 19-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ALIDE2_RS11225 3ec031b020f54c69190a2aad2bfcc3a1 140 Gene3D G3DSA:3.10.129.10 1 139 1.1E-47 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS06580 9c8aa90a79732036304dc42ec8553286 221 Pfam PF07589 PEP-CTERM motif 187 210 7.7E-9 T 19-04-2016 IPR013424 PEP-CTERM protein-sorting domain ALIDE2_RS06580 9c8aa90a79732036304dc42ec8553286 221 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 188 211 5.5E-6 T 19-04-2016 IPR013424 PEP-CTERM protein-sorting domain ALIDE2_RS07455 8c542c995f31bd7801c3f8a45c0dc683 410 Pfam PF02515 CoA-transferase family III 5 371 2.4E-111 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS07455 8c542c995f31bd7801c3f8a45c0dc683 410 SUPERFAMILY SSF89796 3 392 5.76E-124 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07455 8c542c995f31bd7801c3f8a45c0dc683 410 Gene3D G3DSA:3.30.1540.10 222 303 9.3E-28 T 19-04-2016 ALIDE2_RS07455 8c542c995f31bd7801c3f8a45c0dc683 410 PANTHER PTHR24023:SF593 54 381 4.8E-30 T 19-04-2016 ALIDE2_RS07455 8c542c995f31bd7801c3f8a45c0dc683 410 Gene3D G3DSA:3.40.50.10540 2 215 2.0E-101 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07455 8c542c995f31bd7801c3f8a45c0dc683 410 Gene3D G3DSA:3.40.50.10540 304 392 2.0E-101 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS07455 8c542c995f31bd7801c3f8a45c0dc683 410 PANTHER PTHR24023 54 381 4.8E-30 T 19-04-2016 ALIDE2_RS08285 05bb24391775f1e81a94c3706fde866e 125 ProDom PD074011 PRECURSOR SIGNAL RESISTANCE CZCI ZINC COBALT-ZINC-CADMIUM SYSTEM COBALT CATION CADMIUM 16 78 4.0E-4 T 19-04-2016 IPR020487 Cobalt/zinc/cadmium resistance protein CzcI ALIDE2_RS17560 3fa88377f771599d7bb4b7c4f92a89d5 177 PIRSF PIRSF024492 1 177 5.0E-62 T 19-04-2016 IPR014519 Uncharacterised conserved protein UCP024492 ALIDE2_RS17560 3fa88377f771599d7bb4b7c4f92a89d5 177 PANTHER PTHR39337:SF1 6 177 1.8E-55 T 19-04-2016 ALIDE2_RS17560 3fa88377f771599d7bb4b7c4f92a89d5 177 Pfam PF04343 Protein of unknown function, DUF488 14 139 5.3E-31 T 19-04-2016 IPR007438 Protein of unknown function DUF488 ALIDE2_RS17560 3fa88377f771599d7bb4b7c4f92a89d5 177 PANTHER PTHR39337 6 177 1.8E-55 T 19-04-2016 ALIDE2_RS05775 75af58a166fa541e7cc0b22eb84c8d5a 257 PANTHER PTHR11941 1 254 3.6E-84 T 19-04-2016 ALIDE2_RS05775 75af58a166fa541e7cc0b22eb84c8d5a 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 257 1.5E-62 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS05775 75af58a166fa541e7cc0b22eb84c8d5a 257 SUPERFAMILY SSF52096 2 256 6.15E-81 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS05775 75af58a166fa541e7cc0b22eb84c8d5a 257 Gene3D G3DSA:3.90.226.10 2 251 3.6E-78 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS03685 5c59de0da8373b00955c42b68c67d376 162 Pfam PF08909 Domain of unknown function (DUF1854) 33 161 1.3E-48 T 19-04-2016 IPR015005 Domain of unknown function DUF1854 ALIDE2_RS19750 4a56b7356bceb1a7c29c14cbf332d933 122 SUPERFAMILY SSF160719 26 118 3.79E-18 T 19-04-2016 ALIDE2_RS19750 4a56b7356bceb1a7c29c14cbf332d933 122 Gene3D G3DSA:3.10.450.40 2 117 1.1E-26 T 19-04-2016 ALIDE2_RS19750 4a56b7356bceb1a7c29c14cbf332d933 122 Pfam PF04965 Gene 25-like lysozyme 30 109 1.2E-12 T 19-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD ALIDE2_RS19750 4a56b7356bceb1a7c29c14cbf332d933 122 PANTHER PTHR35862 1 117 2.2E-19 T 19-04-2016 ALIDE2_RS19750 4a56b7356bceb1a7c29c14cbf332d933 122 PANTHER PTHR35862:SF2 1 117 2.2E-19 T 19-04-2016 ALIDE2_RS03800 a1b118c424380e48b64ca18995b01eb5 346 Gene3D G3DSA:2.40.160.10 20 346 1.5E-88 T 19-04-2016 IPR023614 Porin domain ALIDE2_RS03800 a1b118c424380e48b64ca18995b01eb5 346 PRINTS PR00184 Neisseria sp. porin signature 285 309 5.6E-9 T 19-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 ALIDE2_RS03800 a1b118c424380e48b64ca18995b01eb5 346 PRINTS PR00184 Neisseria sp. porin signature 54 79 5.6E-9 T 19-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 ALIDE2_RS03800 a1b118c424380e48b64ca18995b01eb5 346 PRINTS PR00184 Neisseria sp. porin signature 92 111 5.6E-9 T 19-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 ALIDE2_RS03800 a1b118c424380e48b64ca18995b01eb5 346 SUPERFAMILY SSF56935 20 346 1.71E-77 T 19-04-2016 ALIDE2_RS03800 a1b118c424380e48b64ca18995b01eb5 346 Pfam PF13609 Gram-negative porin 7 313 3.6E-64 T 19-04-2016 ALIDE2_RS15490 0d89cf96dc9307e2465c9ec4e91d36b0 302 PANTHER PTHR30419 1 295 1.4E-70 T 19-04-2016 ALIDE2_RS15490 0d89cf96dc9307e2465c9ec4e91d36b0 302 Gene3D G3DSA:3.40.190.10 91 177 3.9E-19 T 19-04-2016 ALIDE2_RS15490 0d89cf96dc9307e2465c9ec4e91d36b0 302 Pfam PF03466 LysR substrate binding domain 90 294 6.1E-42 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS15490 0d89cf96dc9307e2465c9ec4e91d36b0 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.4E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15490 0d89cf96dc9307e2465c9ec4e91d36b0 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.4E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15490 0d89cf96dc9307e2465c9ec4e91d36b0 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.4E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15490 0d89cf96dc9307e2465c9ec4e91d36b0 302 PANTHER PTHR30419:SF3 1 295 1.4E-70 T 19-04-2016 ALIDE2_RS15490 0d89cf96dc9307e2465c9ec4e91d36b0 302 Gene3D G3DSA:3.40.190.10 178 267 2.1E-14 T 19-04-2016 ALIDE2_RS15490 0d89cf96dc9307e2465c9ec4e91d36b0 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.6E-20 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS15490 0d89cf96dc9307e2465c9ec4e91d36b0 302 Gene3D G3DSA:1.10.10.10 1 83 1.3E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15490 0d89cf96dc9307e2465c9ec4e91d36b0 302 SUPERFAMILY SSF46785 3 113 2.9E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15490 0d89cf96dc9307e2465c9ec4e91d36b0 302 SUPERFAMILY SSF53850 92 294 1.17E-41 T 19-04-2016 ALIDE2_RS15450 79a69f75cef2fae3dfb3ba8d7338b7d5 363 PANTHER PTHR12725:SF80 74 207 1.4E-17 T 19-04-2016 ALIDE2_RS15450 79a69f75cef2fae3dfb3ba8d7338b7d5 363 Gene3D G3DSA:3.90.1200.10 123 329 8.3E-34 T 19-04-2016 ALIDE2_RS15450 79a69f75cef2fae3dfb3ba8d7338b7d5 363 Pfam PF01636 Phosphotransferase enzyme family 41 267 1.2E-55 T 19-04-2016 IPR002575 Aminoglycoside phosphotransferase ALIDE2_RS15450 79a69f75cef2fae3dfb3ba8d7338b7d5 363 SUPERFAMILY SSF56112 2 330 1.21E-59 T 19-04-2016 IPR011009 Protein kinase-like domain ALIDE2_RS15450 79a69f75cef2fae3dfb3ba8d7338b7d5 363 PANTHER PTHR12725 74 207 1.4E-17 T 19-04-2016 ALIDE2_RS11465 03c40dd8014292aa5bc8cc458607a774 221 SUPERFAMILY SSF53639 1 218 1.86E-47 T 19-04-2016 IPR001303 Class II aldolase/adducin N-terminal ALIDE2_RS11465 03c40dd8014292aa5bc8cc458607a774 221 PANTHER PTHR22789:SF6 1 218 8.7E-65 T 19-04-2016 ALIDE2_RS11465 03c40dd8014292aa5bc8cc458607a774 221 Gene3D G3DSA:3.40.225.10 1 218 6.8E-65 T 19-04-2016 IPR001303 Class II aldolase/adducin N-terminal ALIDE2_RS11465 03c40dd8014292aa5bc8cc458607a774 221 SMART SM01007 8 196 1.1E-47 T 19-04-2016 IPR001303 Class II aldolase/adducin N-terminal ALIDE2_RS11465 03c40dd8014292aa5bc8cc458607a774 221 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 195 1.7E-39 T 19-04-2016 IPR001303 Class II aldolase/adducin N-terminal ALIDE2_RS11465 03c40dd8014292aa5bc8cc458607a774 221 PANTHER PTHR22789 1 218 8.7E-65 T 19-04-2016 ALIDE2_RS17625 415dd5241052c08e17bdd02e6a660e5b 522 Gene3D G3DSA:3.10.105.10 299 492 4.0E-56 T 19-04-2016 ALIDE2_RS17625 415dd5241052c08e17bdd02e6a660e5b 522 PANTHER PTHR30290 23 503 4.5E-117 T 19-04-2016 ALIDE2_RS17625 415dd5241052c08e17bdd02e6a660e5b 522 Gene3D G3DSA:3.90.76.10 34 180 2.9E-37 T 19-04-2016 ALIDE2_RS17625 415dd5241052c08e17bdd02e6a660e5b 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 65 432 8.1E-92 T 19-04-2016 IPR000914 Solute-binding protein family 5 domain ALIDE2_RS17625 415dd5241052c08e17bdd02e6a660e5b 522 SUPERFAMILY SSF53850 19 504 5.79E-129 T 19-04-2016 ALIDE2_RS17625 415dd5241052c08e17bdd02e6a660e5b 522 PIRSF PIRSF002741 6 517 9.0E-106 T 19-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ALIDE2_RS17625 415dd5241052c08e17bdd02e6a660e5b 522 Gene3D G3DSA:3.40.190.10 181 298 1.9E-37 T 19-04-2016 ALIDE2_RS17625 415dd5241052c08e17bdd02e6a660e5b 522 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 70 91 - T 19-04-2016 IPR023765 Solute-binding protein family 5, conserved site ALIDE2_RS18630 c0f1b2b2de14548aa6f70b9368fe8f3f 222 PANTHER PTHR38101:SF1 38 220 1.6E-37 T 19-04-2016 ALIDE2_RS18630 c0f1b2b2de14548aa6f70b9368fe8f3f 222 Pfam PF04751 Protein of unknown function (DUF615) 37 199 1.2E-49 T 19-04-2016 IPR006839 Ribosome-associated, YjgA ALIDE2_RS18630 c0f1b2b2de14548aa6f70b9368fe8f3f 222 Gene3D G3DSA:1.10.60.30 126 206 5.2E-28 T 19-04-2016 IPR023153 PSPTO4464-like domain ALIDE2_RS18630 c0f1b2b2de14548aa6f70b9368fe8f3f 222 PANTHER PTHR38101 38 220 1.6E-37 T 19-04-2016 ALIDE2_RS18630 c0f1b2b2de14548aa6f70b9368fe8f3f 222 Gene3D G3DSA:1.10.60.30 45 118 5.7E-27 T 19-04-2016 IPR023153 PSPTO4464-like domain ALIDE2_RS18630 c0f1b2b2de14548aa6f70b9368fe8f3f 222 SUPERFAMILY SSF158710 45 202 3.14E-42 T 19-04-2016 ALIDE2_RS03910 173a437e42139bb9889684fef2721f20 230 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 25 212 6.9E-60 T 19-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 ALIDE2_RS03910 173a437e42139bb9889684fef2721f20 230 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 30 216 24.808 T 19-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 ALIDE2_RS03910 173a437e42139bb9889684fef2721f20 230 SUPERFAMILY SSF52540 27 216 5.61E-30 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03910 173a437e42139bb9889684fef2721f20 230 Gene3D G3DSA:3.40.50.300 25 216 4.9E-35 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03910 173a437e42139bb9889684fef2721f20 230 Pfam PF01926 50S ribosome-binding GTPase 44 155 1.4E-17 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 ALIDE2_RS03910 173a437e42139bb9889684fef2721f20 230 PANTHER PTHR11649 42 216 4.8E-38 T 19-04-2016 ALIDE2_RS00940 409588e0827a9c2c2aa4719953ce41ce 337 PANTHER PTHR30349:SF32 18 301 7.8E-87 T 19-04-2016 ALIDE2_RS00940 409588e0827a9c2c2aa4719953ce41ce 337 SUPERFAMILY SSF53850 124 293 1.19E-11 T 19-04-2016 ALIDE2_RS00940 409588e0827a9c2c2aa4719953ce41ce 337 PIRSF PIRSF017082 1 337 1.1E-76 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00940 409588e0827a9c2c2aa4719953ce41ce 337 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 332 1.3E-81 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00940 409588e0827a9c2c2aa4719953ce41ce 337 PANTHER PTHR30349 18 301 7.8E-87 T 19-04-2016 ALIDE2_RS19435 2830791f8419bf18c5f28f639261aa55 337 PANTHER PTHR30349:SF32 9 296 5.5E-44 T 19-04-2016 ALIDE2_RS19435 2830791f8419bf18c5f28f639261aa55 337 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 59 333 7.7E-50 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS19435 2830791f8419bf18c5f28f639261aa55 337 PIRSF PIRSF017082 1 337 6.8E-54 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS19435 2830791f8419bf18c5f28f639261aa55 337 PANTHER PTHR30349 9 296 5.5E-44 T 19-04-2016 ALIDE2_RS19435 2830791f8419bf18c5f28f639261aa55 337 SUPERFAMILY SSF53850 40 288 7.6E-9 T 19-04-2016 ALIDE2_RS06650 ccf5b8dea02cd0f541ae085beda99f12 206 PANTHER PTHR34406 21 200 1.6E-25 T 19-04-2016 ALIDE2_RS06650 ccf5b8dea02cd0f541ae085beda99f12 206 SUPERFAMILY SSF101874 46 200 6.02E-40 T 19-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ALIDE2_RS06650 ccf5b8dea02cd0f541ae085beda99f12 206 SMART SM00867 41 201 4.7E-40 T 19-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ALIDE2_RS06650 ccf5b8dea02cd0f541ae085beda99f12 206 PANTHER PTHR34406:SF1 21 200 1.6E-25 T 19-04-2016 ALIDE2_RS06650 ccf5b8dea02cd0f541ae085beda99f12 206 Gene3D G3DSA:2.40.128.110 44 200 7.8E-39 T 19-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ALIDE2_RS06650 ccf5b8dea02cd0f541ae085beda99f12 206 Pfam PF04264 YceI-like domain 44 200 2.0E-29 T 19-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ALIDE2_RS08415 054077c788e44c6c46858bad8ab7a514 323 Gene3D G3DSA:3.20.20.70 10 295 3.1E-75 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS08415 054077c788e44c6c46858bad8ab7a514 323 PANTHER PTHR10277 1 302 4.6E-119 T 19-04-2016 ALIDE2_RS08415 054077c788e44c6c46858bad8ab7a514 323 Pfam PF00682 HMGL-like 11 283 8.2E-50 T 19-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 ALIDE2_RS08415 054077c788e44c6c46858bad8ab7a514 323 PANTHER PTHR10277:SF1 1 302 4.6E-119 T 19-04-2016 ALIDE2_RS08415 054077c788e44c6c46858bad8ab7a514 323 SUPERFAMILY SSF51569 9 302 7.51E-77 T 19-04-2016 ALIDE2_RS18180 b5d01a6a648c7d64818bcd6810766315 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 311 2.5E-64 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS18180 b5d01a6a648c7d64818bcd6810766315 327 PANTHER PTHR30349:SF1 1 287 8.9E-69 T 19-04-2016 ALIDE2_RS18180 b5d01a6a648c7d64818bcd6810766315 327 PIRSF PIRSF017082 1 326 1.7E-64 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS18180 b5d01a6a648c7d64818bcd6810766315 327 PANTHER PTHR30349 1 287 8.9E-69 T 19-04-2016 ALIDE2_RS18180 b5d01a6a648c7d64818bcd6810766315 327 SUPERFAMILY SSF53850 116 289 2.09E-7 T 19-04-2016 ALIDE2_RS06470 11749e6fa9e99c1dfd35161e96594bd9 182 PANTHER PTHR33219:SF5 22 173 1.2E-30 T 19-04-2016 ALIDE2_RS06470 11749e6fa9e99c1dfd35161e96594bd9 182 PANTHER PTHR33219 22 173 1.2E-30 T 19-04-2016 ALIDE2_RS06470 11749e6fa9e99c1dfd35161e96594bd9 182 Pfam PF02325 YGGT family 15 81 1.4E-16 T 19-04-2016 IPR003425 CCB3/YggT GO:0016020 ALIDE2_RS06470 11749e6fa9e99c1dfd35161e96594bd9 182 Pfam PF02325 YGGT family 107 173 1.1E-17 T 19-04-2016 IPR003425 CCB3/YggT GO:0016020 ALIDE2_RS15235 44e4ea8253082ab78ad6831440644085 220 Pfam PF11726 Protein of unknown function (DUF3296) 40 218 8.1E-49 T 19-04-2016 IPR021723 Inovirus Gp2 ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 Gene3D G3DSA:3.30.230.10 469 583 5.0E-47 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 SUPERFAMILY SSF54211 464 584 1.29E-40 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 SUPERFAMILY SSF54980 387 464 2.73E-17 T 19-04-2016 IPR009022 Elongation factor G, III-V domain ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 Gene3D G3DSA:3.30.70.870 389 465 1.6E-22 T 19-04-2016 ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 Pfam PF00679 Elongation factor G C-terminus 586 672 8.8E-23 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 SUPERFAMILY SSF52540 9 263 8.61E-60 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 PANTHER PTHR23115 286 677 1.1E-191 T 19-04-2016 ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 PANTHER PTHR23115 12 180 1.1E-191 T 19-04-2016 ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 PANTHER PTHR23115 236 264 1.1E-191 T 19-04-2016 ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 Pfam PF00009 Elongation factor Tu GTP binding domain 12 262 5.5E-29 T 19-04-2016 ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 SMART SM00838 585 673 1.6E-21 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 PANTHER PTHR23115:SF98 286 677 1.1E-191 T 19-04-2016 ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 PANTHER PTHR23115:SF98 12 180 1.1E-191 T 19-04-2016 ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 PANTHER PTHR23115:SF98 236 264 1.1E-191 T 19-04-2016 ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 Gene3D G3DSA:2.40.30.10 292 379 1.5E-20 T 19-04-2016 ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 Gene3D G3DSA:3.40.50.300 10 267 2.5E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 SUPERFAMILY SSF54980 588 679 6.71E-22 T 19-04-2016 IPR009022 Elongation factor G, III-V domain ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 SUPERFAMILY SSF50447 247 378 4.89E-24 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 SMART SM00889 465 583 6.2E-58 T 19-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 Pfam PF14492 Elongation Factor G, domain II 389 462 3.1E-19 T 19-04-2016 IPR009022 Elongation factor G, III-V domain ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 Gene3D G3DSA:3.30.70.240 584 671 7.3E-23 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain ALIDE2_RS03695 87b21d8b6b4aff868c7475ad8b32f337 684 Pfam PF03764 Elongation factor G, domain IV 464 582 1.9E-40 T 19-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ALIDE2_RS09910 3485b461ebac2fb723e01fb45e2fa09e 237 PANTHER PTHR10108:SF910 6 233 1.5E-109 T 19-04-2016 ALIDE2_RS09910 3485b461ebac2fb723e01fb45e2fa09e 237 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 7.2E-86 T 19-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 ALIDE2_RS09910 3485b461ebac2fb723e01fb45e2fa09e 237 SUPERFAMILY SSF53335 13 234 2.3E-49 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS09910 3485b461ebac2fb723e01fb45e2fa09e 237 PANTHER PTHR10108 6 233 1.5E-109 T 19-04-2016 ALIDE2_RS09910 3485b461ebac2fb723e01fb45e2fa09e 237 Gene3D G3DSA:3.40.50.150 22 218 1.3E-47 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS09910 3485b461ebac2fb723e01fb45e2fa09e 237 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 235 39.436 T 19-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 ALIDE2_RS09910 3485b461ebac2fb723e01fb45e2fa09e 237 Pfam PF13489 Methyltransferase domain 43 205 5.8E-27 T 19-04-2016 ALIDE2_RS15120 82e69bf427eee24589f42bfbd31f7c7c 304 Pfam PF14743 DNA ligase OB-like domain 233 298 2.0E-25 T 19-04-2016 IPR029319 DNA ligase, OB-like domain ALIDE2_RS15120 82e69bf427eee24589f42bfbd31f7c7c 304 Gene3D G3DSA:3.30.1490.70 172 204 1.5E-7 T 19-04-2016 ALIDE2_RS15120 82e69bf427eee24589f42bfbd31f7c7c 304 Gene3D G3DSA:3.30.1490.70 61 71 1.5E-7 T 19-04-2016 ALIDE2_RS15120 82e69bf427eee24589f42bfbd31f7c7c 304 SUPERFAMILY SSF56091 47 219 4.89E-36 T 19-04-2016 ALIDE2_RS15120 82e69bf427eee24589f42bfbd31f7c7c 304 Gene3D G3DSA:2.40.50.140 205 301 5.0E-31 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS15120 82e69bf427eee24589f42bfbd31f7c7c 304 SUPERFAMILY SSF50249 194 298 4.45E-26 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS15120 82e69bf427eee24589f42bfbd31f7c7c 304 PANTHER PTHR10459:SF61 60 301 3.0E-45 T 19-04-2016 ALIDE2_RS15120 82e69bf427eee24589f42bfbd31f7c7c 304 PANTHER PTHR10459 60 301 3.0E-45 T 19-04-2016 ALIDE2_RS00740 58697815e4e4b61d2e7332548c95a614 331 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 327 1.8E-77 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00740 58697815e4e4b61d2e7332548c95a614 331 SUPERFAMILY SSF53850 116 289 2.92E-10 T 19-04-2016 ALIDE2_RS00740 58697815e4e4b61d2e7332548c95a614 331 PANTHER PTHR30349:SF1 7 290 2.1E-80 T 19-04-2016 ALIDE2_RS00740 58697815e4e4b61d2e7332548c95a614 331 PIRSF PIRSF017082 1 331 4.6E-75 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00740 58697815e4e4b61d2e7332548c95a614 331 PANTHER PTHR30349 7 290 2.1E-80 T 19-04-2016 ALIDE2_RS12715 6f68b8e90a959ed03f944212655727fa 385 Pfam PF01757 Acyltransferase family 10 345 8.5E-18 T 19-04-2016 IPR002656 Acyltransferase 3 GO:0016747 ALIDE2_RS19730 b74ceede4d0632b669ad3fd11b7416e5 1145 Pfam PF14870 Photosynthesis system II assembly factor YCF48 191 264 3.1E-7 T 19-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain ALIDE2_RS19730 b74ceede4d0632b669ad3fd11b7416e5 1145 SUPERFAMILY SSF110296 65 306 1.66E-30 T 19-04-2016 ALIDE2_RS19730 b74ceede4d0632b669ad3fd11b7416e5 1145 Gene3D G3DSA:2.130.10.140 109 329 1.1E-26 T 19-04-2016 ALIDE2_RS19730 b74ceede4d0632b669ad3fd11b7416e5 1145 Gene3D G3DSA:2.130.10.140 68 108 8.2E-4 T 19-04-2016 ALIDE2_RS03560 0bffd3c5d3f8e4daed91c63823fa9b74 280 TIGRFAM TIGR03100 hydr1_PEP: exosortase A system-associated hydrolase 1 5 276 1.9E-89 T 19-04-2016 IPR017531 Hydrolase, ortholog 1, exosortase system type 1 associated ALIDE2_RS03560 0bffd3c5d3f8e4daed91c63823fa9b74 280 Pfam PF12146 Serine aminopeptidase, S33 35 147 1.2E-9 T 19-04-2016 IPR022742 Serine aminopeptidase, S33 ALIDE2_RS03560 0bffd3c5d3f8e4daed91c63823fa9b74 280 SUPERFAMILY SSF53474 205 277 1.92E-26 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS03560 0bffd3c5d3f8e4daed91c63823fa9b74 280 SUPERFAMILY SSF53474 10 145 1.92E-26 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS03560 0bffd3c5d3f8e4daed91c63823fa9b74 280 Gene3D G3DSA:3.40.50.1820 11 276 1.8E-21 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS12990 e02522b60b087dbb7be587f6680a64ae 235 SUPERFAMILY SSF100950 2 228 8.97E-90 T 19-04-2016 ALIDE2_RS12990 e02522b60b087dbb7be587f6680a64ae 235 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 2 216 2.4E-76 T 19-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 ALIDE2_RS12990 e02522b60b087dbb7be587f6680a64ae 235 Gene3D G3DSA:3.40.1080.10 3 216 8.0E-102 T 19-04-2016 ALIDE2_RS12990 e02522b60b087dbb7be587f6680a64ae 235 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 19-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 ALIDE2_RS12990 e02522b60b087dbb7be587f6680a64ae 235 SMART SM00882 5 217 7.5E-95 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS12990 e02522b60b087dbb7be587f6680a64ae 235 PANTHER PTHR13707 3 231 6.9E-140 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS12990 e02522b60b087dbb7be587f6680a64ae 235 Pfam PF01144 Coenzyme A transferase 7 217 7.1E-79 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ALIDE2_RS05680 288b0d76004fd85f6e1569d7e796418e 347 Pfam PF01032 FecCD transport family 29 340 3.6E-74 T 19-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 ALIDE2_RS05680 288b0d76004fd85f6e1569d7e796418e 347 PANTHER PTHR30472 19 346 6.4E-77 T 19-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 ALIDE2_RS05680 288b0d76004fd85f6e1569d7e796418e 347 Gene3D G3DSA:1.10.3470.10 18 341 1.5E-84 T 19-04-2016 IPR029022 ABC transporter, BtuC-like ALIDE2_RS05680 288b0d76004fd85f6e1569d7e796418e 347 SUPERFAMILY SSF81345 19 341 6.67E-69 T 19-04-2016 IPR029022 ABC transporter, BtuC-like ALIDE2_RS09675 8ad004a73287962a9e7990f6bd2a2aec 300 Pfam PF07485 Domain of Unknown Function (DUF1259) 180 294 6.0E-38 T 19-04-2016 IPR011094 Uncharacterised protein family, LppY/LpqO ALIDE2_RS09675 8ad004a73287962a9e7990f6bd2a2aec 300 Pfam PF07485 Domain of Unknown Function (DUF1259) 31 150 2.6E-43 T 19-04-2016 IPR011094 Uncharacterised protein family, LppY/LpqO ALIDE2_RS13170 22215e067e577735d8b25e9d1e33b9b5 238 Pfam PF13531 Bacterial extracellular solute-binding protein 23 238 1.3E-30 T 19-04-2016 ALIDE2_RS13170 22215e067e577735d8b25e9d1e33b9b5 238 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 237 7.4E-29 T 19-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 ALIDE2_RS13170 22215e067e577735d8b25e9d1e33b9b5 238 SUPERFAMILY SSF53850 22 238 1.15E-41 T 19-04-2016 ALIDE2_RS13170 22215e067e577735d8b25e9d1e33b9b5 238 PANTHER PTHR30632 1 238 2.2E-21 T 19-04-2016 ALIDE2_RS13170 22215e067e577735d8b25e9d1e33b9b5 238 Gene3D G3DSA:3.40.190.10 96 200 7.7E-23 T 19-04-2016 ALIDE2_RS13170 22215e067e577735d8b25e9d1e33b9b5 238 Gene3D G3DSA:3.40.190.10 4 77 3.1E-7 T 19-04-2016 ALIDE2_RS13170 22215e067e577735d8b25e9d1e33b9b5 238 Gene3D G3DSA:3.40.190.10 202 237 3.1E-7 T 19-04-2016 ALIDE2_RS09215 675c7958f06fad2eba9c9ebad290f77a 318 PANTHER PTHR30349 2 310 2.3E-75 T 19-04-2016 ALIDE2_RS09215 675c7958f06fad2eba9c9ebad290f77a 318 SUPERFAMILY SSF53850 108 281 8.14E-7 T 19-04-2016 ALIDE2_RS09215 675c7958f06fad2eba9c9ebad290f77a 318 PANTHER PTHR30349:SF32 2 310 2.3E-75 T 19-04-2016 ALIDE2_RS09215 675c7958f06fad2eba9c9ebad290f77a 318 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 314 8.6E-84 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS09215 675c7958f06fad2eba9c9ebad290f77a 318 PIRSF PIRSF017082 1 317 1.2E-73 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS11255 ebda32a5536a6a223e355f2f41776761 293 PANTHER PTHR12318:SF0 10 263 8.7E-44 T 19-04-2016 ALIDE2_RS11255 ebda32a5536a6a223e355f2f41776761 293 Gene3D G3DSA:3.90.79.10 13 111 1.1E-19 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS11255 ebda32a5536a6a223e355f2f41776761 293 Gene3D G3DSA:3.90.79.10 147 222 1.1E-19 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS11255 ebda32a5536a6a223e355f2f41776761 293 SUPERFAMILY SSF55811 89 103 3.78E-16 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS11255 ebda32a5536a6a223e355f2f41776761 293 SUPERFAMILY SSF55811 11 59 3.78E-16 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS11255 ebda32a5536a6a223e355f2f41776761 293 SUPERFAMILY SSF55811 142 214 3.78E-16 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS11255 ebda32a5536a6a223e355f2f41776761 293 PANTHER PTHR12318 10 263 8.7E-44 T 19-04-2016 ALIDE2_RS05605 77098ed320eb04d731352ce751df4943 304 SUPERFAMILY SSF46626 221 297 3.58E-21 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS05605 77098ed320eb04d731352ce751df4943 304 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 225 293 5.0E-12 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS05605 77098ed320eb04d731352ce751df4943 304 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 130 206 2.9E-13 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS05605 77098ed320eb04d731352ce751df4943 304 SUPERFAMILY SSF46626 111 215 4.65E-32 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS05605 77098ed320eb04d731352ce751df4943 304 SUPERFAMILY SSF46626 60 83 4.65E-32 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS05605 77098ed320eb04d731352ce751df4943 304 PIRSF PIRSF000006 5 300 1.2E-95 T 19-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 ALIDE2_RS05605 77098ed320eb04d731352ce751df4943 304 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 41 88 7.1E-24 T 19-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 ALIDE2_RS05605 77098ed320eb04d731352ce751df4943 304 PANTHER PTHR33751:SF1 29 303 3.2E-79 T 19-04-2016 ALIDE2_RS05605 77098ed320eb04d731352ce751df4943 304 PRINTS PR00605 Class IC cytochrome C signature 141 152 5.9E-6 T 19-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 ALIDE2_RS05605 77098ed320eb04d731352ce751df4943 304 PRINTS PR00605 Class IC cytochrome C signature 271 293 5.9E-6 T 19-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 ALIDE2_RS05605 77098ed320eb04d731352ce751df4943 304 PANTHER PTHR33751 29 303 3.2E-79 T 19-04-2016 ALIDE2_RS05605 77098ed320eb04d731352ce751df4943 304 Gene3D G3DSA:1.10.760.10 126 223 1.3E-30 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS05605 77098ed320eb04d731352ce751df4943 304 Gene3D G3DSA:1.10.760.10 65 87 1.3E-30 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS05605 77098ed320eb04d731352ce751df4943 304 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 40 299 1.2E-84 T 19-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 ALIDE2_RS05605 77098ed320eb04d731352ce751df4943 304 Gene3D G3DSA:1.10.760.10 224 299 3.2E-22 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS10760 cacab3ce4c53b8b87cb3a1e93a644132 116 Pfam PF11171 Protein of unknown function (DUF2958) 5 114 1.1E-46 T 19-04-2016 IPR021341 Protein of unknown function DUF2958 ALIDE2_RS14915 43231b0c7876bcb93cef36370ad71946 171 Pfam PF12680 SnoaL-like domain 25 127 9.6E-12 T 19-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain ALIDE2_RS14915 43231b0c7876bcb93cef36370ad71946 171 SUPERFAMILY SSF54427 17 135 1.5E-21 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS14915 43231b0c7876bcb93cef36370ad71946 171 Gene3D G3DSA:3.10.450.50 13 152 7.2E-15 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS10030 2a9fc7793b6591cb2d65cacb302b1f70 158 Gene3D G3DSA:3.30.420.10 4 151 4.6E-10 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS10030 2a9fc7793b6591cb2d65cacb302b1f70 158 SUPERFAMILY SSF53098 4 152 3.87E-30 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS09625 3c022bbfd832bbd360860dacd5417bf6 157 SUPERFAMILY SSF47175 44 146 2.5E-18 T 19-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 ALIDE2_RS09625 3c022bbfd832bbd360860dacd5417bf6 157 Pfam PF01322 Cytochrome C' 47 146 4.6E-6 T 19-04-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 ALIDE2_RS09625 3c022bbfd832bbd360860dacd5417bf6 157 Gene3D G3DSA:1.20.120.10 47 147 1.5E-7 T 19-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 ALIDE2_RS19170 fcce72f0933b7afb993f52ba6f2462a6 285 SUPERFAMILY SSF51197 1 285 3.89E-79 T 19-04-2016 ALIDE2_RS19170 fcce72f0933b7afb993f52ba6f2462a6 285 Gene3D G3DSA:3.60.130.10 1 285 3.3E-84 T 19-04-2016 ALIDE2_RS19170 fcce72f0933b7afb993f52ba6f2462a6 285 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 3 277 2.1E-52 T 19-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 ALIDE2_RS19170 fcce72f0933b7afb993f52ba6f2462a6 285 PANTHER PTHR30468 1 285 1.0E-63 T 19-04-2016 ALIDE2_RS09780 b00e12dd22feb8d8f1cf32b2e1803945 505 Pfam PF07916 TraG-like protein, N-terminal region 10 487 1.2E-97 T 19-04-2016 IPR012931 TraG-like, N-terminal ALIDE2_RS01710 9aea0809aad51a9c10a69383176f0a20 142 PIRSF PIRSF004638 1 142 2.5E-46 T 19-04-2016 IPR005265 Uncharacterised protein family UPF0093 ALIDE2_RS01710 9aea0809aad51a9c10a69383176f0a20 142 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 142 1.9E-41 T 19-04-2016 IPR005265 Uncharacterised protein family UPF0093 ALIDE2_RS01710 9aea0809aad51a9c10a69383176f0a20 142 PANTHER PTHR40255 1 142 3.1E-35 T 19-04-2016 ALIDE2_RS21450 47aca5be689712ac152816bc0c0ff106 183 PANTHER PTHR38588:SF1 2 147 1.2E-32 T 19-04-2016 ALIDE2_RS21450 47aca5be689712ac152816bc0c0ff106 183 SUPERFAMILY SSF55961 1 144 9.62E-39 T 19-04-2016 ALIDE2_RS21450 47aca5be689712ac152816bc0c0ff106 183 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 5 143 5.5E-38 T 19-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G ALIDE2_RS21450 47aca5be689712ac152816bc0c0ff106 183 Gene3D G3DSA:3.30.530.20 1 157 4.4E-61 T 19-04-2016 IPR023393 START-like domain ALIDE2_RS21450 47aca5be689712ac152816bc0c0ff106 183 PANTHER PTHR38588 2 147 1.2E-32 T 19-04-2016 ALIDE2_RS04830 fb6b16507ed2c8267aee775104c526b5 231 Pfam PF01988 VIT family 17 224 1.3E-54 T 19-04-2016 IPR008217 Ccc1 family ALIDE2_RS04830 fb6b16507ed2c8267aee775104c526b5 231 PANTHER PTHR31851 6 230 1.4E-61 T 19-04-2016 ALIDE2_RS23245 34d225cc4eafab81f30980250de9cc4e 345 Pfam PF09851 Short C-terminal domain 315 341 4.2E-9 T 19-04-2016 IPR018649 SHOCT domain ALIDE2_RS23245 34d225cc4eafab81f30980250de9cc4e 345 PANTHER PTHR37826:SF2 1 335 1.4E-72 T 19-04-2016 ALIDE2_RS23245 34d225cc4eafab81f30980250de9cc4e 345 PANTHER PTHR37826 1 335 1.4E-72 T 19-04-2016 ALIDE2_RS23245 34d225cc4eafab81f30980250de9cc4e 345 SUPERFAMILY SSF117892 90 231 3.53E-8 T 19-04-2016 IPR001107 Band 7 domain ALIDE2_RS23245 34d225cc4eafab81f30980250de9cc4e 345 Pfam PF13421 SPFH domain-Band 7 family 26 235 7.9E-77 T 19-04-2016 ALIDE2_RS09765 e30d4e88dde3f7cc2349b02f8911dae8 316 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 30 314 4.3E-132 T 19-04-2016 IPR026331 Integrating conjugative element protein PFL_4710 ALIDE2_RS09765 e30d4e88dde3f7cc2349b02f8911dae8 316 Pfam PF06834 TraU protein 35 304 2.6E-70 T 19-04-2016 IPR009649 TraU ALIDE2_RS19445 b8058d24bf806ea4f5aa885843986552 280 SMART SM00382 25 183 9.8E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS19445 b8058d24bf806ea4f5aa885843986552 280 Gene3D G3DSA:3.40.50.300 8 199 2.3E-30 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19445 b8058d24bf806ea4f5aa885843986552 280 SUPERFAMILY SSF52540 8 246 1.71E-34 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19445 b8058d24bf806ea4f5aa885843986552 280 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 176 3.9E-12 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS19445 b8058d24bf806ea4f5aa885843986552 280 PANTHER PTHR22908 1 235 1.1E-69 T 19-04-2016 ALIDE2_RS05170 c9e39be684e80a5fb50036dc9fd04c0e 357 Pfam PF03595 Voltage-dependent anion channel 24 347 1.3E-44 T 19-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 ALIDE2_RS12880 ab3716cad3ec06fbeab37a31c07a99be 502 Gene3D G3DSA:1.20.1600.10 152 340 4.8E-90 T 19-04-2016 ALIDE2_RS12880 ab3716cad3ec06fbeab37a31c07a99be 502 Gene3D G3DSA:1.20.1600.10 63 100 4.8E-90 T 19-04-2016 ALIDE2_RS12880 ab3716cad3ec06fbeab37a31c07a99be 502 Gene3D G3DSA:1.20.1600.10 378 492 4.8E-90 T 19-04-2016 ALIDE2_RS12880 ab3716cad3ec06fbeab37a31c07a99be 502 SUPERFAMILY SSF56954 3 32 7.72E-102 T 19-04-2016 ALIDE2_RS12880 ab3716cad3ec06fbeab37a31c07a99be 502 SUPERFAMILY SSF56954 65 494 7.72E-102 T 19-04-2016 ALIDE2_RS12880 ab3716cad3ec06fbeab37a31c07a99be 502 Gene3D G3DSA:2.20.200.10 341 376 5.6E-27 T 19-04-2016 ALIDE2_RS12880 ab3716cad3ec06fbeab37a31c07a99be 502 Gene3D G3DSA:2.20.200.10 110 151 5.6E-27 T 19-04-2016 ALIDE2_RS12880 ab3716cad3ec06fbeab37a31c07a99be 502 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 490 6.6E-105 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 ALIDE2_RS12880 ab3716cad3ec06fbeab37a31c07a99be 502 PANTHER PTHR30203 1 492 1.2E-145 T 19-04-2016 ALIDE2_RS12880 ab3716cad3ec06fbeab37a31c07a99be 502 Pfam PF02321 Outer membrane efflux protein 74 264 4.4E-24 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS12880 ab3716cad3ec06fbeab37a31c07a99be 502 Pfam PF02321 Outer membrane efflux protein 305 489 1.6E-30 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS12880 ab3716cad3ec06fbeab37a31c07a99be 502 PANTHER PTHR30203:SF15 1 492 1.2E-145 T 19-04-2016 ALIDE2_RS17840 2b76f5601cc3d9b0bed08b10e6b94716 379 Gene3D G3DSA:3.40.190.10 208 340 2.1E-10 T 19-04-2016 ALIDE2_RS17840 2b76f5601cc3d9b0bed08b10e6b94716 379 SUPERFAMILY SSF53850 194 348 2.85E-14 T 19-04-2016 ALIDE2_RS17840 2b76f5601cc3d9b0bed08b10e6b94716 379 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 80 1.2E-13 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS17840 2b76f5601cc3d9b0bed08b10e6b94716 379 Gene3D G3DSA:1.10.10.10 3 126 5.5E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17840 2b76f5601cc3d9b0bed08b10e6b94716 379 Pfam PF12727 PBP superfamily domain 147 330 3.0E-48 T 19-04-2016 IPR024370 PBP domain ALIDE2_RS17840 2b76f5601cc3d9b0bed08b10e6b94716 379 SUPERFAMILY SSF46785 4 129 1.36E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17840 2b76f5601cc3d9b0bed08b10e6b94716 379 PANTHER PTHR38431 151 357 2.5E-28 T 19-04-2016 ALIDE2_RS18785 24a8c261cebb9b25d0910837982be9ed 148 SUPERFAMILY SSF51283 4 147 1.7E-49 T 19-04-2016 IPR029054 dUTPase-like ALIDE2_RS18785 24a8c261cebb9b25d0910837982be9ed 148 TIGRFAM TIGR00576 dut: dUTP diphosphatase 13 147 6.4E-45 T 19-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 ALIDE2_RS18785 24a8c261cebb9b25d0910837982be9ed 148 Gene3D G3DSA:2.70.40.10 4 147 4.4E-49 T 19-04-2016 IPR029054 dUTPase-like ALIDE2_RS18785 24a8c261cebb9b25d0910837982be9ed 148 Pfam PF00692 dUTPase 15 146 2.1E-35 T 19-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 ALIDE2_RS18785 24a8c261cebb9b25d0910837982be9ed 148 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 147 32.309 T 19-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 ALIDE2_RS18785 24a8c261cebb9b25d0910837982be9ed 148 PANTHER PTHR11241 1 147 2.1E-44 T 19-04-2016 ALIDE2_RS15535 761f83a7b4fca162d45c16629e8e2dac 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 182 3.4E-18 T 19-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS15535 761f83a7b4fca162d45c16629e8e2dac 189 SUPERFAMILY SSF88946 19 84 2.9E-7 T 19-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS15535 761f83a7b4fca162d45c16629e8e2dac 189 PANTHER PTHR30173 23 184 3.6E-24 T 19-04-2016 ALIDE2_RS15535 761f83a7b4fca162d45c16629e8e2dac 189 Pfam PF08281 Sigma-70, region 4 126 178 2.7E-16 T 19-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS15535 761f83a7b4fca162d45c16629e8e2dac 189 Gene3D G3DSA:1.10.10.10 122 183 5.2E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS15535 761f83a7b4fca162d45c16629e8e2dac 189 Gene3D G3DSA:1.10.1740.10 9 98 1.8E-7 T 19-04-2016 ALIDE2_RS15535 761f83a7b4fca162d45c16629e8e2dac 189 SUPERFAMILY SSF88659 119 182 5.61E-16 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ALIDE2_RS09085 88631d9af8d61b8cd44379d134c4872b 359 ProSitePatterns PS00855 Signal peptidases II signature. 293 305 - T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS09085 88631d9af8d61b8cd44379d134c4872b 359 SUPERFAMILY SSF48317 10 187 1.23E-30 T 19-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ALIDE2_RS09085 88631d9af8d61b8cd44379d134c4872b 359 Gene3D G3DSA:1.20.144.10 12 189 5.2E-24 T 19-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ALIDE2_RS09085 88631d9af8d61b8cd44379d134c4872b 359 PANTHER PTHR33695:SF1 178 358 1.1E-47 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS09085 88631d9af8d61b8cd44379d134c4872b 359 Pfam PF01569 PAP2 superfamily 72 186 6.4E-20 T 19-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ALIDE2_RS09085 88631d9af8d61b8cd44379d134c4872b 359 TIGRFAM TIGR00077 lspA: signal peptidase II 201 350 1.5E-39 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS09085 88631d9af8d61b8cd44379d134c4872b 359 PANTHER PTHR33695 178 358 1.1E-47 T 19-04-2016 ALIDE2_RS09085 88631d9af8d61b8cd44379d134c4872b 359 SMART SM00014 70 182 2.9E-10 T 19-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ALIDE2_RS09085 88631d9af8d61b8cd44379d134c4872b 359 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 326 342 4.2E-16 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS09085 88631d9af8d61b8cd44379d134c4872b 359 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 290 305 4.2E-16 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS09085 88631d9af8d61b8cd44379d134c4872b 359 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 244 252 4.2E-16 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS09085 88631d9af8d61b8cd44379d134c4872b 359 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 198 351 15.65 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS09085 88631d9af8d61b8cd44379d134c4872b 359 Pfam PF01252 Signal peptidase (SPase) II 207 344 5.9E-34 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 ALIDE2_RS23260 a928f45e6d67c65e87ec7094a0b1d417 314 PANTHER PTHR30126 19 312 2.9E-69 T 19-04-2016 ALIDE2_RS23260 a928f45e6d67c65e87ec7094a0b1d417 314 Pfam PF03466 LysR substrate binding domain 108 309 1.5E-23 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS23260 a928f45e6d67c65e87ec7094a0b1d417 314 Gene3D G3DSA:3.40.190.10 107 220 9.8E-13 T 19-04-2016 ALIDE2_RS23260 a928f45e6d67c65e87ec7094a0b1d417 314 PANTHER PTHR30126:SF16 19 312 2.9E-69 T 19-04-2016 ALIDE2_RS23260 a928f45e6d67c65e87ec7094a0b1d417 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 80 3.9E-14 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS23260 a928f45e6d67c65e87ec7094a0b1d417 314 SUPERFAMILY SSF46785 19 103 1.42E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23260 a928f45e6d67c65e87ec7094a0b1d417 314 Gene3D G3DSA:1.10.10.10 18 94 2.5E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS23260 a928f45e6d67c65e87ec7094a0b1d417 314 SUPERFAMILY SSF53850 100 310 2.79E-23 T 19-04-2016 ALIDE2_RS23190 9f4f21ca62424b4a2952869969386f70 328 PANTHER PTHR30349:SF32 30 325 4.5E-80 T 19-04-2016 ALIDE2_RS23190 9f4f21ca62424b4a2952869969386f70 328 Gene3D G3DSA:3.40.190.10 183 221 9.1E-4 T 19-04-2016 ALIDE2_RS23190 9f4f21ca62424b4a2952869969386f70 328 SUPERFAMILY SSF53850 124 281 2.51E-10 T 19-04-2016 ALIDE2_RS23190 9f4f21ca62424b4a2952869969386f70 328 PIRSF PIRSF017082 1 327 6.8E-73 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS23190 9f4f21ca62424b4a2952869969386f70 328 PANTHER PTHR30349 30 325 4.5E-80 T 19-04-2016 ALIDE2_RS23190 9f4f21ca62424b4a2952869969386f70 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 324 1.3E-83 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS13975 13e3da3e07b3ff487db41638bc480410 250 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 120 230 1.0E-29 T 19-04-2016 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC ALIDE2_RS13975 13e3da3e07b3ff487db41638bc480410 250 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 118 249 3.2E-38 T 19-04-2016 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup ALIDE2_RS10100 f85ce346592c63029eb24a9233c666a2 413 Gene3D G3DSA:3.90.226.10 204 272 4.3E-32 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS10100 f85ce346592c63029eb24a9233c666a2 413 Gene3D G3DSA:3.90.226.10 44 163 4.3E-32 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS10100 f85ce346592c63029eb24a9233c666a2 413 SUPERFAMILY SSF52096 205 265 6.96E-32 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS10100 f85ce346592c63029eb24a9233c666a2 413 SUPERFAMILY SSF52096 56 174 6.96E-32 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS10100 f85ce346592c63029eb24a9233c666a2 413 PANTHER PTHR33209 32 272 6.2E-46 T 19-04-2016 ALIDE2_RS10100 f85ce346592c63029eb24a9233c666a2 413 Pfam PF01343 Peptidase family S49 128 272 4.9E-32 T 19-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 ALIDE2_RS12910 2d97f5bd507febc8b5b496d46d8752aa 309 SUPERFAMILY SSF47648 6 70 2.49E-15 T 19-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain ALIDE2_RS12910 2d97f5bd507febc8b5b496d46d8752aa 309 Gene3D G3DSA:1.20.970.10 7 66 3.3E-19 T 19-04-2016 ALIDE2_RS12910 2d97f5bd507febc8b5b496d46d8752aa 309 Gene3D G3DSA:3.40.1030.10 79 297 7.1E-24 T 19-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 ALIDE2_RS12910 2d97f5bd507febc8b5b496d46d8752aa 309 SUPERFAMILY SSF52418 78 297 3.14E-33 T 19-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 ALIDE2_RS12910 2d97f5bd507febc8b5b496d46d8752aa 309 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 67 1.3E-11 T 19-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain ALIDE2_RS09750 a7f5c9c1bd0f0fc823fb3dacee900200 159 Gene3D G3DSA:1.10.10.60 115 157 2.0E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS09750 a7f5c9c1bd0f0fc823fb3dacee900200 159 SUPERFAMILY SSF46689 115 156 1.22E-7 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS09750 a7f5c9c1bd0f0fc823fb3dacee900200 159 SMART SM00857 1 113 9.1E-21 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS09750 a7f5c9c1bd0f0fc823fb3dacee900200 159 Pfam PF02796 Helix-turn-helix domain of resolvase 115 158 4.4E-11 T 19-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS09750 a7f5c9c1bd0f0fc823fb3dacee900200 159 Pfam PF00239 Resolvase, N terminal domain 6 113 1.6E-31 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS09750 a7f5c9c1bd0f0fc823fb3dacee900200 159 Gene3D G3DSA:3.40.50.1390 8 97 4.7E-27 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS09750 a7f5c9c1bd0f0fc823fb3dacee900200 159 PANTHER PTHR30461 10 156 6.3E-37 T 19-04-2016 ALIDE2_RS09750 a7f5c9c1bd0f0fc823fb3dacee900200 159 ProSitePatterns PS00398 Site-specific recombinases signature 2. 29 41 - T 19-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ALIDE2_RS09750 a7f5c9c1bd0f0fc823fb3dacee900200 159 SUPERFAMILY SSF53041 6 113 3.4E-30 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ALIDE2_RS19425 f8fa9757771669f4ce28e1f68f7bc4b6 398 PANTHER PTHR24023 35 383 1.8E-21 T 19-04-2016 ALIDE2_RS19425 f8fa9757771669f4ce28e1f68f7bc4b6 398 PANTHER PTHR24023:SF593 35 383 1.8E-21 T 19-04-2016 ALIDE2_RS19425 f8fa9757771669f4ce28e1f68f7bc4b6 398 SUPERFAMILY SSF89796 1 396 1.16E-123 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS19425 f8fa9757771669f4ce28e1f68f7bc4b6 398 Pfam PF02515 CoA-transferase family III 4 359 3.2E-116 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS19425 f8fa9757771669f4ce28e1f68f7bc4b6 398 Gene3D G3DSA:3.30.1540.10 221 303 1.7E-27 T 19-04-2016 ALIDE2_RS19425 f8fa9757771669f4ce28e1f68f7bc4b6 398 Gene3D G3DSA:3.40.50.10540 2 215 1.0E-98 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS19425 f8fa9757771669f4ce28e1f68f7bc4b6 398 Gene3D G3DSA:3.40.50.10540 304 396 1.0E-98 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS20635 a8b0799edb22730c65ea39d648f7f5b8 131 SUPERFAMILY SSF54427 32 130 1.42E-34 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS20635 a8b0799edb22730c65ea39d648f7f5b8 131 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 6 129 26.669 T 19-04-2016 IPR023006 Uncharacterised protein family UPF0225 ALIDE2_RS20635 a8b0799edb22730c65ea39d648f7f5b8 131 Gene3D G3DSA:3.10.450.50 9 130 1.1E-40 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS24100 ca634c22e59e0f9ef61f1202de6b7cd4 303 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 79 269 3.3E-41 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS24100 ca634c22e59e0f9ef61f1202de6b7cd4 303 PANTHER PTHR30349 82 237 1.9E-24 T 19-04-2016 ALIDE2_RS24100 ca634c22e59e0f9ef61f1202de6b7cd4 303 PANTHER PTHR30349:SF1 82 237 1.9E-24 T 19-04-2016 ALIDE2_RS24095 bff93480ec5d5a682fe872f5b5865ba8 246 Pfam PF13358 DDE superfamily endonuclease 132 205 1.6E-13 T 19-04-2016 ALIDE2_RS24095 bff93480ec5d5a682fe872f5b5865ba8 246 Pfam PF13551 Winged helix-turn helix 32 101 7.0E-8 T 19-04-2016 ALIDE2_RS08000 1b06c44dcf558ab66cc472799f652f4f 109 Gene3D G3DSA:1.10.10.10 2 95 2.3E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08000 1b06c44dcf558ab66cc472799f652f4f 109 Pfam PF12840 Helix-turn-helix domain 10 69 2.0E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08000 1b06c44dcf558ab66cc472799f652f4f 109 PANTHER PTHR33154 1 101 2.5E-19 T 19-04-2016 ALIDE2_RS08000 1b06c44dcf558ab66cc472799f652f4f 109 SMART SM00418 9 89 1.1E-6 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS08000 1b06c44dcf558ab66cc472799f652f4f 109 PANTHER PTHR33154:SF5 1 101 2.5E-19 T 19-04-2016 ALIDE2_RS08000 1b06c44dcf558ab66cc472799f652f4f 109 SUPERFAMILY SSF46785 3 93 1.34E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08000 1b06c44dcf558ab66cc472799f652f4f 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 3.6E-6 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS08000 1b06c44dcf558ab66cc472799f652f4f 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 3.6E-6 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS08000 1b06c44dcf558ab66cc472799f652f4f 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 3.6E-6 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ALIDE2_RS02870 7c4ac18715a9078ffd9b6b8beb5d90d6 175 Gene3D G3DSA:1.20.950.20 32 165 2.4E-4 T 19-04-2016 ALIDE2_RS02870 7c4ac18715a9078ffd9b6b8beb5d90d6 175 SUPERFAMILY SSF81342 2 166 7.85E-32 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 ALIDE2_RS02870 7c4ac18715a9078ffd9b6b8beb5d90d6 175 Pfam PF01292 Prokaryotic cytochrome b561 3 164 1.2E-20 T 19-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ALIDE2_RS03075 97902d5b96b2cbd0729a01e3e5c5d45b 203 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 29 2.8E-5 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03075 97902d5b96b2cbd0729a01e3e5c5d45b 203 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 7 30 2.0E-8 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03075 97902d5b96b2cbd0729a01e3e5c5d45b 203 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS24075 d8f308494e6cd577d2723c1e24bc30bf 163 SUPERFAMILY SSF56349 11 102 9.71E-7 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS24075 d8f308494e6cd577d2723c1e24bc30bf 163 Gene3D G3DSA:1.10.443.10 18 117 9.3E-6 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS10485 a1a95b3a54aa06512b560556267fa0c0 131 PANTHER PTHR11049:SF5 1 121 1.1E-17 T 19-04-2016 ALIDE2_RS10485 a1a95b3a54aa06512b560556267fa0c0 131 PANTHER PTHR11049 1 121 1.1E-17 T 19-04-2016 ALIDE2_RS10485 a1a95b3a54aa06512b560556267fa0c0 131 SUPERFAMILY SSF54637 4 126 1.75E-25 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS10485 a1a95b3a54aa06512b560556267fa0c0 131 Pfam PF03061 Thioesterase superfamily 22 93 1.1E-6 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS10485 a1a95b3a54aa06512b560556267fa0c0 131 Gene3D G3DSA:3.10.129.10 4 123 1.4E-26 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS07975 659326627fb33f60f11c8569e8ac23e8 93 SUPERFAMILY SSF46955 21 77 8.42E-9 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS07975 659326627fb33f60f11c8569e8ac23e8 93 Pfam PF12728 Helix-turn-helix domain 22 72 9.7E-10 T 19-04-2016 ALIDE2_RS07975 659326627fb33f60f11c8569e8ac23e8 93 Gene3D G3DSA:1.10.10.10 21 77 1.2E-6 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS16300 50df59cbeb710a05e95abddc092dc7e2 385 Gene3D G3DSA:1.10.150.130 61 146 7.4E-7 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS16300 50df59cbeb710a05e95abddc092dc7e2 385 Gene3D G3DSA:1.10.443.10 180 363 5.3E-6 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ALIDE2_RS16300 50df59cbeb710a05e95abddc092dc7e2 385 Pfam PF12835 Integrase 177 310 5.3E-6 T 19-04-2016 IPR024456 Integrase catalytic domain, putative ALIDE2_RS16300 50df59cbeb710a05e95abddc092dc7e2 385 SUPERFAMILY SSF56349 63 323 2.83E-8 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ALIDE2_RS16300 50df59cbeb710a05e95abddc092dc7e2 385 Pfam PF12834 Phage integrase, N-terminal 63 144 1.4E-8 T 19-04-2016 IPR024457 Putative integrase, N-terminal ALIDE2_RS10840 760d6fabf3caae60e9da72633c2ccfed 281 Pfam PF10134 Replication initiator protein A 28 257 4.6E-92 T 19-04-2016 IPR018777 Replication initiator protein A ALIDE2_RS08510 80c98fe3361737ee02440f3465d99933 412 TIGRFAM TIGR01224 hutI: imidazolonepropionase 31 407 1.1E-138 T 19-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 ALIDE2_RS08510 80c98fe3361737ee02440f3465d99933 412 Gene3D G3DSA:2.30.40.10 31 78 2.0E-8 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ALIDE2_RS08510 80c98fe3361737ee02440f3465d99933 412 PANTHER PTHR22642:SF1 62 409 6.3E-138 T 19-04-2016 ALIDE2_RS08510 80c98fe3361737ee02440f3465d99933 412 PANTHER PTHR22642 62 409 6.3E-138 T 19-04-2016 ALIDE2_RS08510 80c98fe3361737ee02440f3465d99933 412 SUPERFAMILY SSF51556 70 369 3.14E-90 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS08510 80c98fe3361737ee02440f3465d99933 412 Pfam PF01979 Amidohydrolase family 68 408 9.6E-18 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 ALIDE2_RS08510 80c98fe3361737ee02440f3465d99933 412 Gene3D G3DSA:3.20.20.140 79 366 1.3E-41 T 19-04-2016 ALIDE2_RS08510 80c98fe3361737ee02440f3465d99933 412 SUPERFAMILY SSF51338 8 70 2.44E-17 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ALIDE2_RS08510 80c98fe3361737ee02440f3465d99933 412 SUPERFAMILY SSF51338 371 409 2.44E-17 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ALIDE2_RS08510 80c98fe3361737ee02440f3465d99933 412 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 409 41.403 T 19-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 ALIDE2_RS19690 df9e40a569185ed8e52aae61bf0de5f4 363 Pfam PF05036 Sporulation related domain 288 359 1.9E-12 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 ALIDE2_RS19690 df9e40a569185ed8e52aae61bf0de5f4 363 SUPERFAMILY SSF110997 288 358 1.44E-13 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 ALIDE2_RS19690 df9e40a569185ed8e52aae61bf0de5f4 363 Gene3D G3DSA:3.30.70.1070 282 359 9.8E-16 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 PANTHER PTHR23023:SF119 125 373 1.2E-70 T 19-04-2016 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 PANTHER PTHR23023:SF119 42 108 1.2E-70 T 19-04-2016 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 Gene3D G3DSA:3.50.50.60 124 188 6.7E-18 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 Gene3D G3DSA:3.50.50.60 46 92 6.7E-18 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 Gene3D G3DSA:3.50.50.60 189 353 4.4E-16 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 129 268 1.1E-14 T 19-04-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 227 252 6.7E-10 T 19-04-2016 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 194 6.7E-10 T 19-04-2016 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 46 68 6.7E-10 T 19-04-2016 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 PANTHER PTHR23023 125 373 1.2E-70 T 19-04-2016 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 PANTHER PTHR23023 42 108 1.2E-70 T 19-04-2016 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 Pfam PF01494 FAD binding domain 45 95 7.7E-8 T 19-04-2016 IPR002938 FAD-binding domain GO:0071949 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 SUPERFAMILY SSF51905 211 353 6.8E-10 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 2.2E-7 T 19-04-2016 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 47 66 2.2E-7 T 19-04-2016 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 227 245 2.2E-7 T 19-04-2016 ALIDE2_RS21315 e6ade6791628e6d1bbc290e67fc39e74 488 SUPERFAMILY SSF51905 45 261 3.7E-27 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS06095 eec70e910de9b1acb2bd637d29ddc705 261 Gene3D G3DSA:3.40.190.10 22 152 9.6E-56 T 19-04-2016 ALIDE2_RS06095 eec70e910de9b1acb2bd637d29ddc705 261 PANTHER PTHR30429 1 261 8.4E-132 T 19-04-2016 IPR004872 Lipoprotein NlpA family ALIDE2_RS06095 eec70e910de9b1acb2bd637d29ddc705 261 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 7 260 1.2E-70 T 19-04-2016 IPR004872 Lipoprotein NlpA family ALIDE2_RS06095 eec70e910de9b1acb2bd637d29ddc705 261 Pfam PF03180 NLPA lipoprotein 24 261 3.1E-98 T 19-04-2016 IPR004872 Lipoprotein NlpA family ALIDE2_RS06095 eec70e910de9b1acb2bd637d29ddc705 261 PIRSF PIRSF002854 1 261 1.7E-102 T 19-04-2016 IPR004872 Lipoprotein NlpA family ALIDE2_RS06095 eec70e910de9b1acb2bd637d29ddc705 261 SUPERFAMILY SSF53850 24 261 1.09E-84 T 19-04-2016 ALIDE2_RS06095 eec70e910de9b1acb2bd637d29ddc705 261 PANTHER PTHR30429:SF0 1 261 8.4E-132 T 19-04-2016 ALIDE2_RS04180 6029314c2bf5d34d5914b878474203dd 333 SUPERFAMILY SSF48452 204 317 1.42E-8 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS04180 6029314c2bf5d34d5914b878474203dd 333 Gene3D G3DSA:1.25.40.10 185 310 4.9E-8 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS10895 5260434fd7a5c9de95c10f921457caed 251 Pfam PF05275 Copper resistance protein B precursor (CopB) 46 251 7.4E-82 T 19-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 ALIDE2_RS10895 5260434fd7a5c9de95c10f921457caed 251 SUPERFAMILY SSF103515 102 248 7.32E-7 T 19-04-2016 IPR005546 Autotransporter beta-domain ALIDE2_RS07615 025094570aa7aa88a4908f372eb062c7 314 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 194 277 1.2E-34 T 19-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal ALIDE2_RS07615 025094570aa7aa88a4908f372eb062c7 314 PANTHER PTHR10909 108 311 5.0E-115 T 19-04-2016 ALIDE2_RS07615 025094570aa7aa88a4908f372eb062c7 314 PANTHER PTHR10909:SF294 108 311 5.0E-115 T 19-04-2016 ALIDE2_RS07615 025094570aa7aa88a4908f372eb062c7 314 SMART SM00893 3 186 9.5E-53 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS07615 025094570aa7aa88a4908f372eb062c7 314 SUPERFAMILY SSF52402 2 190 1.33E-51 T 19-04-2016 ALIDE2_RS07615 025094570aa7aa88a4908f372eb062c7 314 Gene3D G3DSA:3.40.50.1220 189 314 1.4E-58 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS07615 025094570aa7aa88a4908f372eb062c7 314 SUPERFAMILY SSF52467 193 313 4.03E-44 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain ALIDE2_RS07615 025094570aa7aa88a4908f372eb062c7 314 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 258 284 - T 19-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site ALIDE2_RS07615 025094570aa7aa88a4908f372eb062c7 314 PIRSF PIRSF000089 1 314 4.4E-104 T 19-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 ALIDE2_RS07615 025094570aa7aa88a4908f372eb062c7 314 Pfam PF01012 Electron transfer flavoprotein domain 3 173 2.6E-37 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 ALIDE2_RS07615 025094570aa7aa88a4908f372eb062c7 314 Gene3D G3DSA:3.40.50.620 1 185 6.6E-58 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS05885 cdd6285b3f0a1494d00b4fc3c9815e11 183 SUPERFAMILY SSF52540 1 163 5.57E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05885 cdd6285b3f0a1494d00b4fc3c9815e11 183 PANTHER PTHR40072 2 117 4.1E-26 T 19-04-2016 ALIDE2_RS05885 cdd6285b3f0a1494d00b4fc3c9815e11 183 PANTHER PTHR40072:SF2 2 117 4.1E-26 T 19-04-2016 ALIDE2_RS05885 cdd6285b3f0a1494d00b4fc3c9815e11 183 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 3 140 2.5E-48 T 19-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 ALIDE2_RS05885 cdd6285b3f0a1494d00b4fc3c9815e11 183 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 3 166 8.0E-45 T 19-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 ALIDE2_RS05885 cdd6285b3f0a1494d00b4fc3c9815e11 183 Gene3D G3DSA:3.40.50.300 1 168 7.6E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03435 43c2467f6e2438e49f45eeda24953cda 213 TIGRFAM TIGR03027 pepcterm_export: putative polysaccharide export protein, PEP-CTERM sytem-associated 50 213 8.1E-72 T 19-04-2016 IPR017477 PEP-CTERM, putative polysaccharide export protein ALIDE2_RS03435 43c2467f6e2438e49f45eeda24953cda 213 Gene3D G3DSA:3.10.560.10 122 209 3.3E-17 T 19-04-2016 ALIDE2_RS03435 43c2467f6e2438e49f45eeda24953cda 213 Pfam PF10531 SLBB domain 130 178 1.1E-7 T 19-04-2016 IPR019554 Soluble ligand binding domain ALIDE2_RS03435 43c2467f6e2438e49f45eeda24953cda 213 PANTHER PTHR33619 39 209 1.0E-29 T 19-04-2016 ALIDE2_RS03435 43c2467f6e2438e49f45eeda24953cda 213 Gene3D G3DSA:3.30.1950.10 54 121 6.3E-19 T 19-04-2016 ALIDE2_RS03435 43c2467f6e2438e49f45eeda24953cda 213 Pfam PF02563 Polysaccharide biosynthesis/export protein 46 119 1.2E-20 T 19-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 ALIDE2_RS14345 d4d85f35516ab5bb775355dbf9e328aa 330 PANTHER PTHR10996 6 315 2.4E-107 T 19-04-2016 ALIDE2_RS14345 d4d85f35516ab5bb775355dbf9e328aa 330 PANTHER PTHR10996:SF152 6 315 2.4E-107 T 19-04-2016 ALIDE2_RS14345 d4d85f35516ab5bb775355dbf9e328aa 330 SUPERFAMILY SSF51735 106 284 3.07E-51 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS14345 d4d85f35516ab5bb775355dbf9e328aa 330 Gene3D G3DSA:3.40.50.720 119 286 2.4E-54 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS14345 d4d85f35516ab5bb775355dbf9e328aa 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 27 315 8.7E-16 T 19-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS14345 d4d85f35516ab5bb775355dbf9e328aa 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 284 1.1E-50 T 19-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ALIDE2_RS14345 d4d85f35516ab5bb775355dbf9e328aa 330 Gene3D G3DSA:3.40.50.720 6 118 6.8E-25 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS14345 d4d85f35516ab5bb775355dbf9e328aa 330 SUPERFAMILY SSF52283 6 138 2.13E-25 T 19-04-2016 ALIDE2_RS07810 2611d2ff6ce55de09198f24780bf93b1 320 Pfam PF05598 Transposase domain (DUF772) 47 120 1.7E-21 T 19-04-2016 IPR008490 Transposase InsH, N-terminal ALIDE2_RS07810 2611d2ff6ce55de09198f24780bf93b1 320 PANTHER PTHR35604 13 318 1.3E-161 T 19-04-2016 ALIDE2_RS07810 2611d2ff6ce55de09198f24780bf93b1 320 PANTHER PTHR35604:SF2 13 318 1.3E-161 T 19-04-2016 ALIDE2_RS07810 2611d2ff6ce55de09198f24780bf93b1 320 Pfam PF01609 Transposase DDE domain 136 308 2.7E-26 T 19-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS05660 7a02397e87a1d948e525ff19ab71c1d3 617 Gene3D G3DSA:2.40.170.20 164 613 2.9E-77 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS05660 7a02397e87a1d948e525ff19ab71c1d3 617 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 157 2.1E-27 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS05660 7a02397e87a1d948e525ff19ab71c1d3 617 Gene3D G3DSA:2.170.130.10 28 163 2.2E-40 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS05660 7a02397e87a1d948e525ff19ab71c1d3 617 PANTHER PTHR32552 14 615 8.8E-46 T 19-04-2016 ALIDE2_RS05660 7a02397e87a1d948e525ff19ab71c1d3 617 Pfam PF00593 TonB dependent receptor 386 613 1.1E-28 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS05660 7a02397e87a1d948e525ff19ab71c1d3 617 SUPERFAMILY SSF56935 37 613 2.29E-113 T 19-04-2016 ALIDE2_RS22570 f61385c54596e5e173858334873ad23c 232 SMART SM00953 69 202 5.7E-21 T 19-04-2016 IPR014914 RES domain ALIDE2_RS22570 f61385c54596e5e173858334873ad23c 232 Pfam PF08808 RES domain 59 200 3.4E-25 T 19-04-2016 IPR014914 RES domain ALIDE2_RS01265 f080c0e89855d4899ad0f4960ab1e992 153 SUPERFAMILY SSF54637 8 151 6.76E-35 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS01265 f080c0e89855d4899ad0f4960ab1e992 153 Pfam PF01575 MaoC like domain 17 132 7.5E-14 T 19-04-2016 IPR002539 MaoC-like domain ALIDE2_RS01265 f080c0e89855d4899ad0f4960ab1e992 153 PANTHER PTHR13078 10 140 5.3E-20 T 19-04-2016 ALIDE2_RS01265 f080c0e89855d4899ad0f4960ab1e992 153 Gene3D G3DSA:3.10.129.10 5 151 2.2E-36 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS19465 e3d7a5a6125e8694466dd46b0e6feb18 267 PANTHER PTHR30136 19 267 1.5E-86 T 19-04-2016 ALIDE2_RS19465 e3d7a5a6125e8694466dd46b0e6feb18 267 Gene3D G3DSA:3.30.450.40 87 265 3.0E-58 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS19465 e3d7a5a6125e8694466dd46b0e6feb18 267 SMART SM00346 21 109 7.6E-26 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS19465 e3d7a5a6125e8694466dd46b0e6feb18 267 SUPERFAMILY SSF55781 86 264 3.92E-52 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS19465 e3d7a5a6125e8694466dd46b0e6feb18 267 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 18 264 1.7E-101 T 19-04-2016 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 ALIDE2_RS19465 e3d7a5a6125e8694466dd46b0e6feb18 267 Gene3D G3DSA:1.10.10.10 14 80 6.4E-30 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS19465 e3d7a5a6125e8694466dd46b0e6feb18 267 Pfam PF01614 Bacterial transcriptional regulator 137 262 3.1E-36 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS19465 e3d7a5a6125e8694466dd46b0e6feb18 267 SUPERFAMILY SSF46785 21 93 1.07E-12 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS19465 e3d7a5a6125e8694466dd46b0e6feb18 267 PANTHER PTHR30136:SF10 19 267 1.5E-86 T 19-04-2016 ALIDE2_RS19465 e3d7a5a6125e8694466dd46b0e6feb18 267 Pfam PF09339 IclR helix-turn-helix domain 25 74 3.8E-13 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS23290 ad5e35980b21dd20aed70002f07fe42c 286 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 274 8.9E-36 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS23290 ad5e35980b21dd20aed70002f07fe42c 286 PANTHER PTHR11795 1 286 2.6E-87 T 19-04-2016 ALIDE2_RS23290 ad5e35980b21dd20aed70002f07fe42c 286 PANTHER PTHR11795:SF379 1 286 2.6E-87 T 19-04-2016 ALIDE2_RS06695 9c15f6f0c8dfbec9789410dc27fcf9d4 319 PANTHER PTHR10587 14 313 3.0E-133 T 19-04-2016 ALIDE2_RS06695 9c15f6f0c8dfbec9789410dc27fcf9d4 319 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 9 315 2.2E-147 T 19-04-2016 IPR017625 Putative urate catabolism protein ALIDE2_RS06695 9c15f6f0c8dfbec9789410dc27fcf9d4 319 SUPERFAMILY SSF88713 9 315 3.06E-78 T 19-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ALIDE2_RS06695 9c15f6f0c8dfbec9789410dc27fcf9d4 319 PANTHER PTHR10587:SF72 14 313 3.0E-133 T 19-04-2016 ALIDE2_RS06695 9c15f6f0c8dfbec9789410dc27fcf9d4 319 Pfam PF01522 Polysaccharide deacetylase 79 178 9.8E-8 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ALIDE2_RS06695 9c15f6f0c8dfbec9789410dc27fcf9d4 319 Gene3D G3DSA:3.20.20.370 8 317 6.6E-94 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ALIDE2_RS06790 0605ace094d58fc28f2f550572596e86 188 PANTHER PTHR11241:SF1 1 187 3.8E-76 T 19-04-2016 ALIDE2_RS06790 0605ace094d58fc28f2f550572596e86 188 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 188 28.314 T 19-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 ALIDE2_RS06790 0605ace094d58fc28f2f550572596e86 188 PANTHER PTHR11241 1 187 3.8E-76 T 19-04-2016 ALIDE2_RS06790 0605ace094d58fc28f2f550572596e86 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 187 1.8E-50 T 19-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 ALIDE2_RS06790 0605ace094d58fc28f2f550572596e86 188 Gene3D G3DSA:2.70.40.10 3 187 5.7E-69 T 19-04-2016 IPR029054 dUTPase-like ALIDE2_RS06790 0605ace094d58fc28f2f550572596e86 188 Pfam PF00692 dUTPase 80 184 8.2E-7 T 19-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 ALIDE2_RS06790 0605ace094d58fc28f2f550572596e86 188 SUPERFAMILY SSF51283 3 187 2.88E-52 T 19-04-2016 IPR029054 dUTPase-like ALIDE2_RS04320 418b70208038b0d71193b394d1a226da 290 Pfam PF05673 Protein of unknown function (DUF815) 35 287 3.3E-104 T 19-04-2016 IPR008533 Domain of unknown function DUF815 ALIDE2_RS04320 418b70208038b0d71193b394d1a226da 290 PANTHER PTHR13779 218 289 2.7E-80 T 19-04-2016 ALIDE2_RS04320 418b70208038b0d71193b394d1a226da 290 PANTHER PTHR13779 4 190 2.7E-80 T 19-04-2016 ALIDE2_RS04320 418b70208038b0d71193b394d1a226da 290 SUPERFAMILY SSF52540 11 195 3.43E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04320 418b70208038b0d71193b394d1a226da 290 Gene3D G3DSA:3.40.50.300 69 194 1.1E-16 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04320 418b70208038b0d71193b394d1a226da 290 PANTHER PTHR13779:SF28 218 289 2.7E-80 T 19-04-2016 ALIDE2_RS04320 418b70208038b0d71193b394d1a226da 290 PANTHER PTHR13779:SF28 4 190 2.7E-80 T 19-04-2016 ALIDE2_RS04340 3926c756d68ca11b5b4716687e3d936e 210 Pfam PF01121 Dephospho-CoA kinase 15 191 1.7E-53 T 19-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 ALIDE2_RS04340 3926c756d68ca11b5b4716687e3d936e 210 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 16 193 3.5E-44 T 19-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 ALIDE2_RS04340 3926c756d68ca11b5b4716687e3d936e 210 SUPERFAMILY SSF52540 11 204 5.89E-33 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04340 3926c756d68ca11b5b4716687e3d936e 210 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 12 207 25.618 T 19-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 ALIDE2_RS04340 3926c756d68ca11b5b4716687e3d936e 210 PANTHER PTHR10695 15 191 9.5E-55 T 19-04-2016 ALIDE2_RS04340 3926c756d68ca11b5b4716687e3d936e 210 Gene3D G3DSA:3.40.50.300 8 204 3.2E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05595 b9585a0f0f45965d799b7cdabf00b305 210 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 14 190 8.5E-87 T 19-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO ALIDE2_RS05595 b9585a0f0f45965d799b7cdabf00b305 210 Gene3D G3DSA:1.10.760.10 25 206 1.2E-39 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS05595 b9585a0f0f45965d799b7cdabf00b305 210 PANTHER PTHR10422 30 170 3.3E-85 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS05595 b9585a0f0f45965d799b7cdabf00b305 210 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 17 190 1.6E-90 T 19-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO ALIDE2_RS05595 b9585a0f0f45965d799b7cdabf00b305 210 PANTHER PTHR10422:SF23 30 170 3.3E-85 T 19-04-2016 ALIDE2_RS05595 b9585a0f0f45965d799b7cdabf00b305 210 SUPERFAMILY SSF46626 24 203 1.11E-29 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS22510 767d41003675322b3d658da7f6e454f7 133 PANTHER PTHR35006:SF1 1 127 1.3E-57 T 19-04-2016 ALIDE2_RS22510 767d41003675322b3d658da7f6e454f7 133 PANTHER PTHR35006 1 127 1.3E-57 T 19-04-2016 ALIDE2_RS22510 767d41003675322b3d658da7f6e454f7 133 Gene3D G3DSA:3.10.180.10 2 129 1.5E-19 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS22510 767d41003675322b3d658da7f6e454f7 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 121 1.7E-4 T 19-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ALIDE2_RS22510 767d41003675322b3d658da7f6e454f7 133 SUPERFAMILY SSF54593 2 128 3.52E-22 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALIDE2_RS11520 d1198589ae400cac87faeaa3bebbe644 335 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 9 306 21.793 T 19-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ALIDE2_RS11520 d1198589ae400cac87faeaa3bebbe644 335 Pfam PF01171 PP-loop family 19 198 1.4E-48 T 19-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal ALIDE2_RS11520 d1198589ae400cac87faeaa3bebbe644 335 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 18 202 6.8E-44 T 19-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ALIDE2_RS11520 d1198589ae400cac87faeaa3bebbe644 335 Gene3D G3DSA:3.40.50.620 18 177 3.8E-13 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS11520 d1198589ae400cac87faeaa3bebbe644 335 PANTHER PTHR11807 1 237 1.4E-63 T 19-04-2016 ALIDE2_RS11520 d1198589ae400cac87faeaa3bebbe644 335 Pfam PF09179 TilS substrate binding domain 246 311 1.8E-13 T 19-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ALIDE2_RS11520 d1198589ae400cac87faeaa3bebbe644 335 SUPERFAMILY SSF52402 17 232 1.31E-52 T 19-04-2016 ALIDE2_RS11520 d1198589ae400cac87faeaa3bebbe644 335 PANTHER PTHR11807:SF2 1 237 1.4E-63 T 19-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ALIDE2_RS11520 d1198589ae400cac87faeaa3bebbe644 335 SUPERFAMILY SSF82829 235 315 1.15E-16 T 19-04-2016 ALIDE2_RS13530 d20bf6c51217574063154d305bdb2508 339 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 306 6.7E-58 T 19-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ALIDE2_RS13530 d20bf6c51217574063154d305bdb2508 339 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 150 177 - T 19-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ALIDE2_RS13530 d20bf6c51217574063154d305bdb2508 339 Gene3D G3DSA:3.40.50.720 39 121 6.5E-32 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS13530 d20bf6c51217574063154d305bdb2508 339 SUPERFAMILY SSF51735 107 306 2.76E-55 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS13530 d20bf6c51217574063154d305bdb2508 339 Gene3D G3DSA:3.40.50.720 122 309 2.0E-66 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS13530 d20bf6c51217574063154d305bdb2508 339 SUPERFAMILY SSF52283 20 141 1.83E-28 T 19-04-2016 ALIDE2_RS13530 d20bf6c51217574063154d305bdb2508 339 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 198 220 - T 19-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ALIDE2_RS13530 d20bf6c51217574063154d305bdb2508 339 PANTHER PTHR10996 50 339 2.0E-112 T 19-04-2016 ALIDE2_RS13530 d20bf6c51217574063154d305bdb2508 339 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 47 336 6.1E-30 T 19-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 ALIDE2_RS13530 d20bf6c51217574063154d305bdb2508 339 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 227 243 - T 19-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ALIDE2_RS16330 73071d4d1ea569259ff62d72bb635c05 347 Pfam PF14456 Alpha-helical domain 2 56 343 3.5E-85 T 19-04-2016 ALIDE2_RS16330 73071d4d1ea569259ff62d72bb635c05 347 TIGRFAM TIGR03742 PRTRC_F: PRTRC system protein F 6 345 1.5E-113 T 19-04-2016 IPR022283 ParB-related, ThiF-related cassette, protein F ALIDE2_RS02620 bdcf146f9c57ecea242deae3a490b403 530 SUPERFAMILY SSF51905 3 287 4.05E-90 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS02620 bdcf146f9c57ecea242deae3a490b403 530 SUPERFAMILY SSF51905 472 529 4.05E-90 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS02620 bdcf146f9c57ecea242deae3a490b403 530 Pfam PF00732 GMC oxidoreductase 4 294 7.1E-94 T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS02620 bdcf146f9c57ecea242deae3a490b403 530 Gene3D G3DSA:3.50.50.60 466 529 1.3E-123 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS02620 bdcf146f9c57ecea242deae3a490b403 530 Gene3D G3DSA:3.50.50.60 2 125 1.3E-123 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS02620 bdcf146f9c57ecea242deae3a490b403 530 Gene3D G3DSA:3.50.50.60 186 312 1.3E-123 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS02620 bdcf146f9c57ecea242deae3a490b403 530 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS02620 bdcf146f9c57ecea242deae3a490b403 530 PIRSF PIRSF000137 1 530 2.1E-156 T 19-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 ALIDE2_RS02620 bdcf146f9c57ecea242deae3a490b403 530 Pfam PF05199 GMC oxidoreductase 387 523 3.0E-41 T 19-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 ALIDE2_RS02620 bdcf146f9c57ecea242deae3a490b403 530 SUPERFAMILY SSF54373 289 473 4.41E-51 T 19-04-2016 ALIDE2_RS02620 bdcf146f9c57ecea242deae3a490b403 530 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 253 267 - T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS02620 bdcf146f9c57ecea242deae3a490b403 530 PANTHER PTHR11552 1 529 2.3E-213 T 19-04-2016 ALIDE2_RS14745 2ceeec35e132c3ba908b91b5f504f089 96 Gene3D G3DSA:1.10.260.40 18 88 3.1E-21 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS14745 2ceeec35e132c3ba908b91b5f504f089 96 PANTHER PTHR10245 1 90 5.5E-16 T 19-04-2016 ALIDE2_RS14745 2ceeec35e132c3ba908b91b5f504f089 96 SMART SM00530 28 83 1.0E-11 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS14745 2ceeec35e132c3ba908b91b5f504f089 96 Pfam PF01381 Helix-turn-helix 29 82 2.6E-11 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS14745 2ceeec35e132c3ba908b91b5f504f089 96 PANTHER PTHR10245:SF41 1 90 5.5E-16 T 19-04-2016 ALIDE2_RS14745 2ceeec35e132c3ba908b91b5f504f089 96 SUPERFAMILY SSF47413 22 88 8.58E-17 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS16165 764e9958a1f24f81191e03bc250990a3 385 Gene3D G3DSA:1.25.40.10 36 278 3.7E-19 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS16165 764e9958a1f24f81191e03bc250990a3 385 SUPERFAMILY SSF48452 187 239 3.13E-13 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS16165 764e9958a1f24f81191e03bc250990a3 385 SUPERFAMILY SSF48452 41 94 3.13E-13 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS16165 764e9958a1f24f81191e03bc250990a3 385 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 7 384 29.851 T 19-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 ALIDE2_RS16165 764e9958a1f24f81191e03bc250990a3 385 Pfam PF13432 Tetratricopeptide repeat 46 91 0.005 T 19-04-2016 ALIDE2_RS16165 764e9958a1f24f81191e03bc250990a3 385 PANTHER PTHR23083 16 246 2.9E-14 T 19-04-2016 ALIDE2_RS16165 764e9958a1f24f81191e03bc250990a3 385 SMART SM00028 215 248 140.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS16165 764e9958a1f24f81191e03bc250990a3 385 SMART SM00028 181 214 330.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS16165 764e9958a1f24f81191e03bc250990a3 385 SMART SM00028 71 104 82.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS16165 764e9958a1f24f81191e03bc250990a3 385 SMART SM00028 37 70 19.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ALIDE2_RS16165 764e9958a1f24f81191e03bc250990a3 385 Pfam PF14559 Tetratricopeptide repeat 191 247 3.1E-8 T 19-04-2016 ALIDE2_RS05335 92ba5b200d3d7b78856721f03fe9aa9b 216 SUPERFAMILY SSF160443 131 213 9.15E-19 T 19-04-2016 IPR002625 Smr domain ALIDE2_RS05335 92ba5b200d3d7b78856721f03fe9aa9b 216 PANTHER PTHR35562 31 214 7.2E-46 T 19-04-2016 ALIDE2_RS05335 92ba5b200d3d7b78856721f03fe9aa9b 216 Pfam PF01713 Smr domain 133 213 4.8E-24 T 19-04-2016 IPR002625 Smr domain ALIDE2_RS05335 92ba5b200d3d7b78856721f03fe9aa9b 216 SMART SM00463 130 214 7.5E-10 T 19-04-2016 IPR002625 Smr domain ALIDE2_RS05335 92ba5b200d3d7b78856721f03fe9aa9b 216 PANTHER PTHR35562:SF2 31 214 7.2E-46 T 19-04-2016 ALIDE2_RS01600 b356d43b69268528e56146f81b3e4d64 173 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 16 158 6.0E-21 T 19-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 ALIDE2_RS01600 b356d43b69268528e56146f81b3e4d64 173 Pfam PF04093 rod shape-determining protein MreD 17 118 2.0E-14 T 19-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 ALIDE2_RS01600 b356d43b69268528e56146f81b3e4d64 173 PANTHER PTHR37484 7 167 3.2E-15 T 19-04-2016 ALIDE2_RS01600 b356d43b69268528e56146f81b3e4d64 173 PIRSF PIRSF018472 6 166 6.9E-35 T 19-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type ALIDE2_RS11510 830475fc88acd2001a79a0f9f4a3f4b8 215 SUPERFAMILY SSF48150 40 207 6.63E-37 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 ALIDE2_RS11510 830475fc88acd2001a79a0f9f4a3f4b8 215 PANTHER PTHR10242 17 206 8.9E-53 T 19-04-2016 ALIDE2_RS11510 830475fc88acd2001a79a0f9f4a3f4b8 215 SMART SM00478 57 209 9.5E-14 T 19-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 ALIDE2_RS11510 830475fc88acd2001a79a0f9f4a3f4b8 215 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 54 194 1.7E-11 T 19-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 ALIDE2_RS11510 830475fc88acd2001a79a0f9f4a3f4b8 215 PANTHER PTHR10242:SF0 17 206 8.9E-53 T 19-04-2016 ALIDE2_RS11510 830475fc88acd2001a79a0f9f4a3f4b8 215 Gene3D G3DSA:1.10.340.30 48 155 3.2E-28 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 ALIDE2_RS11510 830475fc88acd2001a79a0f9f4a3f4b8 215 Gene3D G3DSA:1.10.1670.10 157 209 1.7E-14 T 19-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal ALIDE2_RS01020 67cddf006301bcd0f54800d419a565b8 238 PANTHER PTHR35603 127 187 3.8E-13 T 19-04-2016 ALIDE2_RS01020 67cddf006301bcd0f54800d419a565b8 238 Pfam PF05433 Glycine zipper 2TM domain 132 171 1.6E-10 T 19-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 ALIDE2_RS10845 d5a6ac2918c606f790148234be535892 212 PANTHER PTHR13696:SF54 1 209 2.9E-63 T 19-04-2016 ALIDE2_RS10845 d5a6ac2918c606f790148234be535892 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 156 2.8E-26 T 19-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE2_RS10845 d5a6ac2918c606f790148234be535892 212 SUPERFAMILY SSF52540 1 210 7.89E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10845 d5a6ac2918c606f790148234be535892 212 Gene3D G3DSA:3.40.50.300 1 210 2.9E-39 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS10845 d5a6ac2918c606f790148234be535892 212 PIRSF PIRSF009320 1 210 6.4E-51 T 19-04-2016 ALIDE2_RS10845 d5a6ac2918c606f790148234be535892 212 PANTHER PTHR13696 1 209 2.9E-63 T 19-04-2016 ALIDE2_RS23375 c8cd5fef778fcf0f7f6ae73ec43a55e5 487 Gene3D G3DSA:3.40.630.10 398 484 3.1E-48 T 19-04-2016 ALIDE2_RS23375 c8cd5fef778fcf0f7f6ae73ec43a55e5 487 Gene3D G3DSA:3.40.630.10 23 211 3.1E-48 T 19-04-2016 ALIDE2_RS23375 c8cd5fef778fcf0f7f6ae73ec43a55e5 487 Pfam PF07687 Peptidase dimerisation domain 215 382 1.7E-11 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS23375 c8cd5fef778fcf0f7f6ae73ec43a55e5 487 Pfam PF01546 Peptidase family M20/M25/M40 103 483 5.4E-24 T 19-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 ALIDE2_RS23375 c8cd5fef778fcf0f7f6ae73ec43a55e5 487 PANTHER PTHR11014:SF88 314 485 3.5E-175 T 19-04-2016 ALIDE2_RS23375 c8cd5fef778fcf0f7f6ae73ec43a55e5 487 PANTHER PTHR11014:SF88 17 295 3.5E-175 T 19-04-2016 ALIDE2_RS23375 c8cd5fef778fcf0f7f6ae73ec43a55e5 487 SUPERFAMILY SSF53187 399 484 1.15E-47 T 19-04-2016 ALIDE2_RS23375 c8cd5fef778fcf0f7f6ae73ec43a55e5 487 SUPERFAMILY SSF53187 22 217 1.15E-47 T 19-04-2016 ALIDE2_RS23375 c8cd5fef778fcf0f7f6ae73ec43a55e5 487 PANTHER PTHR11014 314 485 3.5E-175 T 19-04-2016 ALIDE2_RS23375 c8cd5fef778fcf0f7f6ae73ec43a55e5 487 PANTHER PTHR11014 17 295 3.5E-175 T 19-04-2016 ALIDE2_RS23375 c8cd5fef778fcf0f7f6ae73ec43a55e5 487 Gene3D G3DSA:3.30.70.360 217 393 2.6E-28 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain ALIDE2_RS18930 e5a7b45a6f7b7e4658cb0aaff64581d9 193 SUPERFAMILY SSF47240 50 191 3.48E-39 T 19-04-2016 IPR009078 Ferritin-like superfamily ALIDE2_RS18930 e5a7b45a6f7b7e4658cb0aaff64581d9 193 Pfam PF13668 Ferritin-like domain 53 184 3.6E-35 T 19-04-2016 ALIDE2_RS18930 e5a7b45a6f7b7e4658cb0aaff64581d9 193 Gene3D G3DSA:1.20.1260.10 49 185 1.8E-18 T 19-04-2016 IPR012347 Ferritin-related ALIDE2_RS08955 526152e80fa12f4bd721867e4282644e 66 SUPERFAMILY SSF46955 8 57 1.26E-9 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS08955 526152e80fa12f4bd721867e4282644e 66 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 9 55 9.1E-19 T 19-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 ALIDE2_RS08955 526152e80fa12f4bd721867e4282644e 66 Gene3D G3DSA:1.10.10.10 8 60 7.3E-8 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08955 526152e80fa12f4bd721867e4282644e 66 Pfam PF12728 Helix-turn-helix domain 9 56 1.0E-19 T 19-04-2016 ALIDE2_RS22115 172b91498322d6c93cfc916935354777 353 Gene3D G3DSA:3.30.470.20 196 288 1.5E-6 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ALIDE2_RS22115 172b91498322d6c93cfc916935354777 353 SUPERFAMILY SSF56059 131 310 1.92E-21 T 19-04-2016 ALIDE2_RS00980 45e27cbc8eb4f97b26e36efa9bb6fc59 52 Pfam PF09827 CRISPR associated protein Cas2 1 50 1.4E-11 T 19-04-2016 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 ALIDE2_RS00980 45e27cbc8eb4f97b26e36efa9bb6fc59 52 SUPERFAMILY SSF143430 1 49 4.84E-9 T 19-04-2016 ALIDE2_RS00980 45e27cbc8eb4f97b26e36efa9bb6fc59 52 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 48 5.5E-12 T 19-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 ALIDE2_RS10800 450e5fb83238489fa7a3b642ec0d0c64 349 Pfam PF00892 EamA-like transporter family 6 140 7.7E-22 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS10800 450e5fb83238489fa7a3b642ec0d0c64 349 Pfam PF00892 EamA-like transporter family 154 284 1.8E-7 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS10800 450e5fb83238489fa7a3b642ec0d0c64 349 SUPERFAMILY SSF103481 62 145 4.71E-13 T 19-04-2016 ALIDE2_RS10800 450e5fb83238489fa7a3b642ec0d0c64 349 SUPERFAMILY SSF103481 191 289 1.11E-8 T 19-04-2016 ALIDE2_RS10800 450e5fb83238489fa7a3b642ec0d0c64 349 PANTHER PTHR12715 6 283 3.6E-23 T 19-04-2016 ALIDE2_RS10130 6dedb800413c90497ba3c1e0246fb9b9 250 PIRSF PIRSF028589 1 250 1.7E-120 T 19-04-2016 IPR016893 Protein of unknown function UCP028589 ALIDE2_RS14200 df14973ab77a764ba2e7504a9eebe0e0 403 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 403 34.798 T 19-04-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 ALIDE2_RS14200 df14973ab77a764ba2e7504a9eebe0e0 403 PANTHER PTHR11958 5 399 3.8E-205 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS14200 df14973ab77a764ba2e7504a9eebe0e0 403 Gene3D G3DSA:1.10.3860.10 9 395 2.4E-81 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS14200 df14973ab77a764ba2e7504a9eebe0e0 403 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 5.2E-14 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS14200 df14973ab77a764ba2e7504a9eebe0e0 403 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 5.2E-14 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS14200 df14973ab77a764ba2e7504a9eebe0e0 403 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 5.2E-14 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS14200 df14973ab77a764ba2e7504a9eebe0e0 403 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 5.2E-14 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS14200 df14973ab77a764ba2e7504a9eebe0e0 403 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 5.2E-14 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS14200 df14973ab77a764ba2e7504a9eebe0e0 403 Pfam PF00375 Sodium:dicarboxylate symporter family 15 394 1.4E-61 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS14200 df14973ab77a764ba2e7504a9eebe0e0 403 SUPERFAMILY SSF118215 15 396 3.01E-89 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 ALIDE2_RS14200 df14973ab77a764ba2e7504a9eebe0e0 403 PANTHER PTHR11958:SF68 5 399 3.8E-205 T 19-04-2016 ALIDE2_RS18140 27e639ae82c46a4425424b9428de4d1b 338 PANTHER PTHR30024 9 283 3.0E-16 T 19-04-2016 ALIDE2_RS18140 27e639ae82c46a4425424b9428de4d1b 338 Pfam PF02621 Menaquinone biosynthesis 72 291 1.3E-4 T 19-04-2016 IPR003773 Menaquinone biosynthesis enzyme UniPathway: UPA00079 ALIDE2_RS18140 27e639ae82c46a4425424b9428de4d1b 338 Gene3D G3DSA:3.40.190.10 118 204 9.0E-8 T 19-04-2016 ALIDE2_RS18140 27e639ae82c46a4425424b9428de4d1b 338 SUPERFAMILY SSF53850 37 335 2.02E-24 T 19-04-2016 ALIDE2_RS18140 27e639ae82c46a4425424b9428de4d1b 338 PIRSF PIRSF027386 1 337 4.7E-98 T 19-04-2016 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type ALIDE2_RS12325 bb80bfc25888c4f30952a1968f155197 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 2.0E-13 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS12325 bb80bfc25888c4f30952a1968f155197 202 PANTHER PTHR30328:SF18 4 177 6.1E-21 T 19-04-2016 ALIDE2_RS12325 bb80bfc25888c4f30952a1968f155197 202 PANTHER PTHR30328 4 177 6.1E-21 T 19-04-2016 ALIDE2_RS12325 bb80bfc25888c4f30952a1968f155197 202 Gene3D G3DSA:1.10.10.60 3 58 3.3E-17 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS12325 bb80bfc25888c4f30952a1968f155197 202 SUPERFAMILY SSF46689 3 79 3.85E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS12325 bb80bfc25888c4f30952a1968f155197 202 SUPERFAMILY SSF48498 85 188 1.25E-7 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS12325 bb80bfc25888c4f30952a1968f155197 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.2E-6 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS12325 bb80bfc25888c4f30952a1968f155197 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.2E-6 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS12325 bb80bfc25888c4f30952a1968f155197 202 Gene3D G3DSA:1.10.357.10 59 178 1.5E-12 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS11515 47a436d2b6173e72c72808ae52af6b32 325 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 4 320 5.5E-153 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS11515 47a436d2b6173e72c72808ae52af6b32 325 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 6 317 50.268 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS11515 47a436d2b6173e72c72808ae52af6b32 325 Gene3D G3DSA:3.90.226.10 59 285 5.4E-49 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS11515 47a436d2b6173e72c72808ae52af6b32 325 SUPERFAMILY SSF52096 6 317 7.85E-103 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS11515 47a436d2b6173e72c72808ae52af6b32 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 198 207 2.0E-45 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS11515 47a436d2b6173e72c72808ae52af6b32 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 154 167 2.0E-45 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS11515 47a436d2b6173e72c72808ae52af6b32 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 135 151 2.0E-45 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS11515 47a436d2b6173e72c72808ae52af6b32 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 170 183 2.0E-45 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS11515 47a436d2b6173e72c72808ae52af6b32 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 114 132 2.0E-45 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS11515 47a436d2b6173e72c72808ae52af6b32 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 89 100 2.0E-45 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS11515 47a436d2b6173e72c72808ae52af6b32 325 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 149 4.2E-67 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS11515 47a436d2b6173e72c72808ae52af6b32 325 PANTHER PTHR22855 5 323 9.7E-126 T 19-04-2016 ALIDE2_RS11515 47a436d2b6173e72c72808ae52af6b32 325 PANTHER PTHR22855:SF42 5 323 9.7E-126 T 19-04-2016 ALIDE2_RS03960 cc1e77f462a9bfe261f35459c91120b9 359 SUPERFAMILY SSF53067 196 356 1.3E-21 T 19-04-2016 ALIDE2_RS03960 cc1e77f462a9bfe261f35459c91120b9 359 PANTHER PTHR32432 2 355 5.9E-69 T 19-04-2016 ALIDE2_RS03960 cc1e77f462a9bfe261f35459c91120b9 359 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 15 357 6.1E-95 T 19-04-2016 IPR005883 Type IV pilus assembly protein PilM ALIDE2_RS03960 cc1e77f462a9bfe261f35459c91120b9 359 SUPERFAMILY SSF53067 38 178 2.19E-15 T 19-04-2016 ALIDE2_RS03960 cc1e77f462a9bfe261f35459c91120b9 359 Pfam PF11104 Type IV pilus assembly protein PilM; 17 357 9.3E-148 T 19-04-2016 IPR005883 Type IV pilus assembly protein PilM ALIDE2_RS03960 cc1e77f462a9bfe261f35459c91120b9 359 PANTHER PTHR32432:SF3 2 355 5.9E-69 T 19-04-2016 ALIDE2_RS03960 cc1e77f462a9bfe261f35459c91120b9 359 Gene3D G3DSA:3.30.420.40 200 317 1.9E-26 T 19-04-2016 ALIDE2_RS03960 cc1e77f462a9bfe261f35459c91120b9 359 PIRSF PIRSF019169 2 358 7.0E-118 T 19-04-2016 IPR005883 Type IV pilus assembly protein PilM ALIDE2_RS03960 cc1e77f462a9bfe261f35459c91120b9 359 Gene3D G3DSA:3.30.420.40 11 109 1.6E-4 T 19-04-2016 ALIDE2_RS14415 d2d9f66a0ea85611d7d3010b467b4b53 421 PIRSF PIRSF006066 1 421 4.7E-122 T 19-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 ALIDE2_RS14415 d2d9f66a0ea85611d7d3010b467b4b53 421 PANTHER PTHR33362 7 417 3.3E-171 T 19-04-2016 ALIDE2_RS14415 d2d9f66a0ea85611d7d3010b467b4b53 421 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 414 1.1E-97 T 19-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit ALIDE2_RS14415 d2d9f66a0ea85611d7d3010b467b4b53 421 PANTHER PTHR33362:SF2 7 417 3.3E-171 T 19-04-2016 ALIDE2_RS14415 d2d9f66a0ea85611d7d3010b467b4b53 421 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 14 417 5.3E-108 T 19-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 ALIDE2_RS08905 049f50327f8f297385b1ba64639729f8 177 Pfam PF11072 Protein of unknown function (DUF2859) 30 175 5.0E-58 T 19-04-2016 IPR021300 Integrating conjugative element protein, PFL4695 ALIDE2_RS08905 049f50327f8f297385b1ba64639729f8 177 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 73 177 7.9E-45 T 19-04-2016 IPR021300 Integrating conjugative element protein, PFL4695 ALIDE2_RS12580 ec3b5ab07e0056fa04edb064b1e2580b 322 SUPERFAMILY SSF53822 34 283 1.77E-21 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS12580 ec3b5ab07e0056fa04edb064b1e2580b 322 Gene3D G3DSA:3.40.50.2300 27 156 1.5E-55 T 19-04-2016 ALIDE2_RS12580 ec3b5ab07e0056fa04edb064b1e2580b 322 PANTHER PTHR35271 1 322 1.6E-72 T 19-04-2016 ALIDE2_RS12580 ec3b5ab07e0056fa04edb064b1e2580b 322 Pfam PF04392 ABC transporter substrate binding protein 29 320 4.0E-112 T 19-04-2016 IPR007487 ABC transporter, substrate-binding protein ALIDE2_RS12580 ec3b5ab07e0056fa04edb064b1e2580b 322 Gene3D G3DSA:3.40.50.2300 157 286 7.2E-52 T 19-04-2016 ALIDE2_RS03165 7b9ba5bd20f0c107830afc89159c5543 142 PANTHER PTHR36919 1 142 1.3E-34 T 19-04-2016 ALIDE2_RS03165 7b9ba5bd20f0c107830afc89159c5543 142 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 25 140 4.4E-27 T 19-04-2016 IPR019223 Domain of unknown function DUF2147 ALIDE2_RS03165 7b9ba5bd20f0c107830afc89159c5543 142 PANTHER PTHR36919:SF1 1 142 1.3E-34 T 19-04-2016 ALIDE2_RS09130 e9d677ed509c7b72c10245eda735aac6 122 Pfam PF07804 HipA-like C-terminal domain 1 97 6.2E-22 T 19-04-2016 IPR012893 HipA-like, C-terminal ALIDE2_RS17215 fcaa75a870cb789a40ee80af8d919085 448 Pfam PF01425 Amidase 28 435 8.9E-75 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS17215 fcaa75a870cb789a40ee80af8d919085 448 ProSitePatterns PS00571 Amidases signature. 150 181 - T 19-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS17215 fcaa75a870cb789a40ee80af8d919085 448 Gene3D G3DSA:3.90.1300.10 32 446 1.2E-100 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS17215 fcaa75a870cb789a40ee80af8d919085 448 SUPERFAMILY SSF75304 11 445 9.81E-98 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS17215 fcaa75a870cb789a40ee80af8d919085 448 PANTHER PTHR11895 45 448 2.6E-86 T 19-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS21875 2e0438d0ef39450b6e172bda6bb33ddb 580 PANTHER PTHR36837:SF2 1 580 1.7E-213 T 19-04-2016 ALIDE2_RS21875 2e0438d0ef39450b6e172bda6bb33ddb 580 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 91 260 4.2E-57 T 19-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- ALIDE2_RS21875 2e0438d0ef39450b6e172bda6bb33ddb 580 Gene3D G3DSA:3.40.50.1820 199 551 6.5E-30 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS21875 2e0438d0ef39450b6e172bda6bb33ddb 580 PANTHER PTHR36837 1 580 1.7E-213 T 19-04-2016 ALIDE2_RS21875 2e0438d0ef39450b6e172bda6bb33ddb 580 SUPERFAMILY SSF53474 205 504 3.35E-42 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS21875 2e0438d0ef39450b6e172bda6bb33ddb 580 Pfam PF12551 Poly-beta-hydroxybutyrate polymerase N terminal 11 51 1.5E-14 T 19-04-2016 IPR022211 Poly-beta-hydroxybutyrate polymerase N-terminal ALIDE2_RS21685 0232443bf438463b0aae185dbad05de4 179 PIRSF PIRSF005900 18 179 3.2E-43 T 19-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 ALIDE2_RS21685 0232443bf438463b0aae185dbad05de4 179 Gene3D G3DSA:1.20.1260.10 23 179 3.0E-64 T 19-04-2016 IPR012347 Ferritin-related ALIDE2_RS21685 0232443bf438463b0aae185dbad05de4 179 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 59 75 5.1E-10 T 19-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 ALIDE2_RS21685 0232443bf438463b0aae185dbad05de4 179 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 155 173 5.1E-10 T 19-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 ALIDE2_RS21685 0232443bf438463b0aae185dbad05de4 179 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 83 99 5.1E-10 T 19-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 ALIDE2_RS21685 0232443bf438463b0aae185dbad05de4 179 PANTHER PTHR30295 17 179 2.2E-60 T 19-04-2016 ALIDE2_RS21685 0232443bf438463b0aae185dbad05de4 179 PANTHER PTHR30295:SF6 17 179 2.2E-60 T 19-04-2016 ALIDE2_RS21685 0232443bf438463b0aae185dbad05de4 179 SUPERFAMILY SSF47240 26 179 3.25E-49 T 19-04-2016 IPR009078 Ferritin-like superfamily ALIDE2_RS21685 0232443bf438463b0aae185dbad05de4 179 Pfam PF00210 Ferritin-like domain 40 179 5.8E-28 T 19-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ALIDE2_RS21685 0232443bf438463b0aae185dbad05de4 179 ProSitePatterns PS00819 Dps protein family signature 2. 85 99 - T 19-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 ALIDE2_RS11710 4176a7d9e0920618adfc0e77f4f83ed3 117 SUPERFAMILY SSF46626 7 106 1.7E-17 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS11710 4176a7d9e0920618adfc0e77f4f83ed3 117 Gene3D G3DSA:1.10.760.10 7 105 4.2E-17 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS11710 4176a7d9e0920618adfc0e77f4f83ed3 117 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 32 101 5.8E-11 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS08870 a6e6756df8c802246e3b49df9414cce5 235 SUPERFAMILY SSF49899 88 211 2.56E-8 T 19-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain ALIDE2_RS08870 a6e6756df8c802246e3b49df9414cce5 235 Gene3D G3DSA:2.60.120.200 93 198 3.6E-4 T 19-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain ALIDE2_RS18165 3b07e3270c3243d7740b8868e2d96a0f 410 Pfam PF07690 Major Facilitator Superfamily 20 362 1.0E-45 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS18165 3b07e3270c3243d7740b8868e2d96a0f 410 Gene3D G3DSA:1.20.1250.20 217 401 1.7E-7 T 19-04-2016 ALIDE2_RS18165 3b07e3270c3243d7740b8868e2d96a0f 410 Gene3D G3DSA:1.20.1250.20 18 197 1.6E-30 T 19-04-2016 ALIDE2_RS18165 3b07e3270c3243d7740b8868e2d96a0f 410 PANTHER PTHR23502 13 405 4.5E-100 T 19-04-2016 ALIDE2_RS18165 3b07e3270c3243d7740b8868e2d96a0f 410 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 390 4.1E-79 T 19-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 ALIDE2_RS18165 3b07e3270c3243d7740b8868e2d96a0f 410 PANTHER PTHR23502:SF19 13 405 4.5E-100 T 19-04-2016 ALIDE2_RS18165 3b07e3270c3243d7740b8868e2d96a0f 410 SUPERFAMILY SSF103473 6 401 1.83E-64 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS05730 38bfc19c85705d9d8f476e8caff50328 414 PANTHER PTHR24023 67 401 1.3E-36 T 19-04-2016 ALIDE2_RS05730 38bfc19c85705d9d8f476e8caff50328 414 PANTHER PTHR24023 14 43 1.3E-36 T 19-04-2016 ALIDE2_RS05730 38bfc19c85705d9d8f476e8caff50328 414 Gene3D G3DSA:3.30.1540.10 241 322 3.7E-34 T 19-04-2016 ALIDE2_RS05730 38bfc19c85705d9d8f476e8caff50328 414 Gene3D G3DSA:3.40.50.10540 8 234 7.0E-119 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS05730 38bfc19c85705d9d8f476e8caff50328 414 Gene3D G3DSA:3.40.50.10540 323 414 7.0E-119 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS05730 38bfc19c85705d9d8f476e8caff50328 414 SUPERFAMILY SSF89796 6 414 2.22E-140 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS05730 38bfc19c85705d9d8f476e8caff50328 414 PANTHER PTHR24023:SF593 67 401 1.3E-36 T 19-04-2016 ALIDE2_RS05730 38bfc19c85705d9d8f476e8caff50328 414 PANTHER PTHR24023:SF593 14 43 1.3E-36 T 19-04-2016 ALIDE2_RS05730 38bfc19c85705d9d8f476e8caff50328 414 Pfam PF02515 CoA-transferase family III 11 390 1.8E-133 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS03470 f50bf9d86a4cd1c3a0613cc9890e56b6 533 Pfam PF11984 Protein of unknown function (DUF3485) 320 522 3.9E-27 T 19-04-2016 IPR014263 Methanolan biosynthesis EpsI ALIDE2_RS03470 f50bf9d86a4cd1c3a0613cc9890e56b6 533 TIGRFAM TIGR02914 EpsI_fam: EpsI family protein 349 524 6.2E-36 T 19-04-2016 IPR014263 Methanolan biosynthesis EpsI ALIDE2_RS03470 f50bf9d86a4cd1c3a0613cc9890e56b6 533 TIGRFAM TIGR02602 8TM_EpsH: exosortase 51 285 4.1E-74 T 19-04-2016 IPR013426 Exosortase, EpsH ALIDE2_RS03470 f50bf9d86a4cd1c3a0613cc9890e56b6 533 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 192 285 4.3E-19 T 19-04-2016 IPR026392 Exosortase/Archaeosortase domain ALIDE2_RS03470 f50bf9d86a4cd1c3a0613cc9890e56b6 533 TIGRFAM TIGR03109 exosortase_1: exosortase A 22 286 5.4E-101 T 19-04-2016 IPR017540 Exosortase 1 ALIDE2_RS03470 f50bf9d86a4cd1c3a0613cc9890e56b6 533 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 35 284 4.2E-58 T 19-04-2016 IPR019127 Exosortase EpsH-related KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS16995 3218dfa9a237bcf4c9baa773ab1fba97 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 1.9E-64 T 19-04-2016 IPR007551 Protein of unknown function DUF520 ALIDE2_RS16995 3218dfa9a237bcf4c9baa773ab1fba97 161 SUPERFAMILY SSF89963 2 87 2.17E-29 T 19-04-2016 IPR007551 Protein of unknown function DUF520 ALIDE2_RS16995 3218dfa9a237bcf4c9baa773ab1fba97 161 SUPERFAMILY SSF89963 89 161 3.92E-25 T 19-04-2016 IPR007551 Protein of unknown function DUF520 ALIDE2_RS16995 3218dfa9a237bcf4c9baa773ab1fba97 161 Gene3D G3DSA:3.30.70.860 95 161 7.9E-31 T 19-04-2016 ALIDE2_RS16995 3218dfa9a237bcf4c9baa773ab1fba97 161 PANTHER PTHR30476 1 161 1.4E-73 T 19-04-2016 ALIDE2_RS16995 3218dfa9a237bcf4c9baa773ab1fba97 161 PANTHER PTHR30476:SF0 1 161 1.4E-73 T 19-04-2016 ALIDE2_RS16995 3218dfa9a237bcf4c9baa773ab1fba97 161 Gene3D G3DSA:3.30.70.990 10 94 8.6E-33 T 19-04-2016 ALIDE2_RS16995 3218dfa9a237bcf4c9baa773ab1fba97 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 27.399 T 19-04-2016 IPR007551 Protein of unknown function DUF520 ALIDE2_RS18710 cdbd5976abe1ecefba5eedc129bf8d74 303 SUPERFAMILY SSF103481 196 286 3.79E-8 T 19-04-2016 ALIDE2_RS18710 cdbd5976abe1ecefba5eedc129bf8d74 303 PANTHER PTHR22911 4 291 3.1E-23 T 19-04-2016 ALIDE2_RS06670 547f2235a30a6896753d96b798b5c9f6 491 SMART SM00283 187 428 5.2E-81 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS06670 547f2235a30a6896753d96b798b5c9f6 491 SUPERFAMILY SSF58104 184 429 1.44E-62 T 19-04-2016 ALIDE2_RS06670 547f2235a30a6896753d96b798b5c9f6 491 Gene3D G3DSA:1.10.287.950 205 406 1.7E-56 T 19-04-2016 ALIDE2_RS06670 547f2235a30a6896753d96b798b5c9f6 491 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 362 391 4.9E-47 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS06670 547f2235a30a6896753d96b798b5c9f6 491 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 343 4.9E-47 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS06670 547f2235a30a6896753d96b798b5c9f6 491 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 208 237 4.9E-47 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS06670 547f2235a30a6896753d96b798b5c9f6 491 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 285 312 4.9E-47 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS06670 547f2235a30a6896753d96b798b5c9f6 491 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 242 425 1.9E-53 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS06670 547f2235a30a6896753d96b798b5c9f6 491 PANTHER PTHR32089 169 431 4.9E-114 T 19-04-2016 ALIDE2_RS06670 547f2235a30a6896753d96b798b5c9f6 491 PANTHER PTHR32089:SF63 169 431 4.9E-114 T 19-04-2016 ALIDE2_RS17245 5ff098966c75ee432e55cbce58c232be 271 Pfam PF02405 Permease MlaE 56 260 1.5E-26 T 19-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 ALIDE2_RS16570 b750b39dc430227426b4b4a43c6768b1 99 Pfam PF07178 TraL protein 5 98 1.2E-30 T 19-04-2016 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 ALIDE2_RS16570 b750b39dc430227426b4b4a43c6768b1 99 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 5 98 2.2E-31 T 19-04-2016 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 ALIDE2_RS02460 e630d08a002ad260bb3b1bb97c8e6a15 432 PIRSF PIRSF003085 5 413 2.0E-125 T 19-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 ALIDE2_RS02460 e630d08a002ad260bb3b1bb97c8e6a15 432 PANTHER PTHR10108:SF743 321 410 5.8E-103 T 19-04-2016 ALIDE2_RS02460 e630d08a002ad260bb3b1bb97c8e6a15 432 SUPERFAMILY SSF53335 119 397 8.98E-73 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS02460 e630d08a002ad260bb3b1bb97c8e6a15 432 PANTHER PTHR10108:SF743 33 304 5.8E-103 T 19-04-2016 ALIDE2_RS02460 e630d08a002ad260bb3b1bb97c8e6a15 432 Gene3D G3DSA:3.40.50.150 109 394 2.0E-89 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS02460 e630d08a002ad260bb3b1bb97c8e6a15 432 PANTHER PTHR10108 33 304 5.8E-103 T 19-04-2016 ALIDE2_RS02460 e630d08a002ad260bb3b1bb97c8e6a15 432 Pfam PF02353 Mycolic acid cyclopropane synthetase 110 392 7.3E-93 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS02460 e630d08a002ad260bb3b1bb97c8e6a15 432 PANTHER PTHR10108 321 410 5.8E-103 T 19-04-2016 ALIDE2_RS03310 31e896212e7eba018d57132a736d2fa4 124 Pfam PF01521 Iron-sulphur cluster biosynthesis 16 116 3.5E-19 T 19-04-2016 IPR000361 FeS cluster biogenesis ALIDE2_RS03310 31e896212e7eba018d57132a736d2fa4 124 PANTHER PTHR10072 16 121 7.0E-46 T 19-04-2016 ALIDE2_RS03310 31e896212e7eba018d57132a736d2fa4 124 Gene3D G3DSA:2.60.300.12 12 107 6.2E-33 T 19-04-2016 IPR000361 FeS cluster biogenesis ALIDE2_RS03310 31e896212e7eba018d57132a736d2fa4 124 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 102 119 - T 19-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site ALIDE2_RS03310 31e896212e7eba018d57132a736d2fa4 124 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 17 121 1.2E-38 T 19-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 ALIDE2_RS03310 31e896212e7eba018d57132a736d2fa4 124 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 121 37.052 T 19-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 ALIDE2_RS03310 31e896212e7eba018d57132a736d2fa4 124 SUPERFAMILY SSF89360 13 107 2.35E-31 T 19-04-2016 IPR000361 FeS cluster biogenesis ALIDE2_RS17460 1ec4f5dda6b7c3b9f219b38c4c16c8f3 282 Pfam PF13371 Tetratricopeptide repeat 205 276 9.5E-20 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS17460 1ec4f5dda6b7c3b9f219b38c4c16c8f3 282 PANTHER PTHR31350:SF1 39 280 7.7E-39 T 19-04-2016 ALIDE2_RS17460 1ec4f5dda6b7c3b9f219b38c4c16c8f3 282 Gene3D G3DSA:1.25.40.10 199 265 1.2E-4 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS17460 1ec4f5dda6b7c3b9f219b38c4c16c8f3 282 PANTHER PTHR31350 39 280 7.7E-39 T 19-04-2016 ALIDE2_RS17460 1ec4f5dda6b7c3b9f219b38c4c16c8f3 282 Pfam PF13369 Transglutaminase-like superfamily 47 203 4.1E-48 T 19-04-2016 IPR032698 Protein SirB1, N-terminal ALIDE2_RS11390 cfb003e4b7e7e9232e93ac0f0c296195 297 Pfam PF12697 Alpha/beta hydrolase family 50 284 1.4E-17 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS11390 cfb003e4b7e7e9232e93ac0f0c296195 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 5.2E-5 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS11390 cfb003e4b7e7e9232e93ac0f0c296195 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 74 89 5.2E-5 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS11390 cfb003e4b7e7e9232e93ac0f0c296195 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 133 146 5.2E-5 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS11390 cfb003e4b7e7e9232e93ac0f0c296195 297 Gene3D G3DSA:3.40.50.1820 20 292 6.5E-41 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS11390 cfb003e4b7e7e9232e93ac0f0c296195 297 SUPERFAMILY SSF53474 25 292 4.26E-45 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS11390 cfb003e4b7e7e9232e93ac0f0c296195 297 PANTHER PTHR10992 35 160 5.6E-34 T 19-04-2016 ALIDE2_RS11390 cfb003e4b7e7e9232e93ac0f0c296195 297 PANTHER PTHR10992 185 293 5.6E-34 T 19-04-2016 ALIDE2_RS11390 cfb003e4b7e7e9232e93ac0f0c296195 297 PRINTS PR00412 Epoxide hydrolase signature 268 290 3.5E-8 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS11390 cfb003e4b7e7e9232e93ac0f0c296195 297 PRINTS PR00412 Epoxide hydrolase signature 54 72 3.5E-8 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS11390 cfb003e4b7e7e9232e93ac0f0c296195 297 PRINTS PR00412 Epoxide hydrolase signature 74 89 3.5E-8 T 19-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ALIDE2_RS13130 46d1a83c92953d4545fb2bfcd267a785 347 Gene3D G3DSA:3.30.70.260 237 345 1.9E-27 T 19-04-2016 ALIDE2_RS13130 46d1a83c92953d4545fb2bfcd267a785 347 PANTHER PTHR24220:SF455 3 335 6.9E-138 T 19-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 ALIDE2_RS13130 46d1a83c92953d4545fb2bfcd267a785 347 SUPERFAMILY SSF55021 262 344 1.06E-20 T 19-04-2016 ALIDE2_RS13130 46d1a83c92953d4545fb2bfcd267a785 347 PANTHER PTHR24220 3 335 6.9E-138 T 19-04-2016 ALIDE2_RS13130 46d1a83c92953d4545fb2bfcd267a785 347 SUPERFAMILY SSF52540 1 239 5.2E-83 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13130 46d1a83c92953d4545fb2bfcd267a785 347 SMART SM00930 269 344 4.4E-29 T 19-04-2016 IPR018449 NIL domain ALIDE2_RS13130 46d1a83c92953d4545fb2bfcd267a785 347 Pfam PF00005 ABC transporter 21 169 7.7E-34 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS13130 46d1a83c92953d4545fb2bfcd267a785 347 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS13130 46d1a83c92953d4545fb2bfcd267a785 347 SMART SM00382 30 227 8.6E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS13130 46d1a83c92953d4545fb2bfcd267a785 347 Gene3D G3DSA:3.40.50.300 1 236 8.0E-86 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13130 46d1a83c92953d4545fb2bfcd267a785 347 Pfam PF09383 NIL domain 271 342 1.4E-23 T 19-04-2016 IPR018449 NIL domain ALIDE2_RS06430 e523a44ce40bbb52424808b955b7fe34 390 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 18 385 9.8E-138 T 19-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ALIDE2_RS06430 e523a44ce40bbb52424808b955b7fe34 390 Gene3D G3DSA:3.40.640.10 11 262 2.6E-90 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ALIDE2_RS06430 e523a44ce40bbb52424808b955b7fe34 390 PANTHER PTHR30244:SF3 2 389 6.3E-154 T 19-04-2016 ALIDE2_RS06430 e523a44ce40bbb52424808b955b7fe34 390 SUPERFAMILY SSF53383 10 388 9.49E-121 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase ALIDE2_RS06430 e523a44ce40bbb52424808b955b7fe34 390 PIRSF PIRSF000390 7 390 8.8E-120 T 19-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ALIDE2_RS06430 e523a44ce40bbb52424808b955b7fe34 390 Gene3D G3DSA:3.90.1150.10 264 389 1.3E-40 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ALIDE2_RS06430 e523a44ce40bbb52424808b955b7fe34 390 PANTHER PTHR30244 2 389 6.3E-154 T 19-04-2016 ALIDE2_RS21480 58c600f323981ffb8f0a567450e2c2c0 308 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 13 268 9.0E-15 T 19-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 ALIDE2_RS21480 58c600f323981ffb8f0a567450e2c2c0 308 SUPERFAMILY SSF53474 4 144 2.4E-44 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS21480 58c600f323981ffb8f0a567450e2c2c0 308 SUPERFAMILY SSF53474 221 302 2.4E-44 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS21480 58c600f323981ffb8f0a567450e2c2c0 308 PANTHER PTHR17630 234 263 5.6E-33 T 19-04-2016 ALIDE2_RS21480 58c600f323981ffb8f0a567450e2c2c0 308 PANTHER PTHR17630 7 145 5.6E-33 T 19-04-2016 ALIDE2_RS21480 58c600f323981ffb8f0a567450e2c2c0 308 PANTHER PTHR17630:SF50 234 263 5.6E-33 T 19-04-2016 ALIDE2_RS21480 58c600f323981ffb8f0a567450e2c2c0 308 PANTHER PTHR17630:SF50 7 145 5.6E-33 T 19-04-2016 ALIDE2_RS21480 58c600f323981ffb8f0a567450e2c2c0 308 Gene3D G3DSA:3.40.50.1820 188 286 1.2E-49 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS21480 58c600f323981ffb8f0a567450e2c2c0 308 Gene3D G3DSA:3.40.50.1820 4 148 1.2E-49 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS23065 67061d66072eb09e64ffd41dce950e3b 379 Pfam PF13452 N-terminal half of MaoC dehydratase 27 156 3.7E-17 T 19-04-2016 ALIDE2_RS23065 67061d66072eb09e64ffd41dce950e3b 379 Gene3D G3DSA:3.10.129.10 27 167 6.5E-17 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS23065 67061d66072eb09e64ffd41dce950e3b 379 Gene3D G3DSA:3.10.129.10 205 378 4.2E-19 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS23065 67061d66072eb09e64ffd41dce950e3b 379 SUPERFAMILY SSF54637 27 180 1.65E-21 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS23065 67061d66072eb09e64ffd41dce950e3b 379 SUPERFAMILY SSF54637 273 378 2.35E-13 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS23065 67061d66072eb09e64ffd41dce950e3b 379 SUPERFAMILY SSF54637 208 242 2.35E-13 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS15350 c51d2dd4119418a82946daadab9a2812 627 PANTHER PTHR13847 213 620 1.7E-26 T 19-04-2016 ALIDE2_RS15350 c51d2dd4119418a82946daadab9a2812 627 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 6 627 20.126 T 19-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 ALIDE2_RS15350 c51d2dd4119418a82946daadab9a2812 627 SUPERFAMILY SSF51971 550 611 1.41E-25 T 19-04-2016 ALIDE2_RS15350 c51d2dd4119418a82946daadab9a2812 627 SUPERFAMILY SSF51971 249 473 1.41E-25 T 19-04-2016 ALIDE2_RS15350 c51d2dd4119418a82946daadab9a2812 627 Gene3D G3DSA:3.40.50.150 12 239 2.4E-87 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS15350 c51d2dd4119418a82946daadab9a2812 627 Gene3D G3DSA:3.50.50.60 565 614 1.0E-26 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15350 c51d2dd4119418a82946daadab9a2812 627 Gene3D G3DSA:3.50.50.60 377 459 1.0E-26 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15350 c51d2dd4119418a82946daadab9a2812 627 Gene3D G3DSA:3.50.50.60 249 321 1.0E-26 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS15350 c51d2dd4119418a82946daadab9a2812 627 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 111 230 1.7E-29 T 19-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 ALIDE2_RS15350 c51d2dd4119418a82946daadab9a2812 627 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 253 626 2.3E-62 T 19-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 ALIDE2_RS15350 c51d2dd4119418a82946daadab9a2812 627 PANTHER PTHR13847:SF182 213 620 1.7E-26 T 19-04-2016 ALIDE2_RS15350 c51d2dd4119418a82946daadab9a2812 627 SUPERFAMILY SSF53335 20 223 4.76E-5 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS15350 c51d2dd4119418a82946daadab9a2812 627 Pfam PF01266 FAD dependent oxidoreductase 253 606 1.8E-33 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS20510 78942efbdfa7661921dca63af9a88755 86 PANTHER PTHR35175:SF2 1 77 4.8E-20 T 19-04-2016 ALIDE2_RS20510 78942efbdfa7661921dca63af9a88755 86 Pfam PF06945 Protein of unknown function (DUF1289) 30 76 5.2E-18 T 19-04-2016 IPR010710 Protein of unknown function DUF1289 ALIDE2_RS20510 78942efbdfa7661921dca63af9a88755 86 PANTHER PTHR35175 1 77 4.8E-20 T 19-04-2016 ALIDE2_RS01190 9441309f06151b5554cfaf4c3b43a68c 328 PANTHER PTHR30349:SF32 14 319 1.1E-51 T 19-04-2016 ALIDE2_RS01190 9441309f06151b5554cfaf4c3b43a68c 328 PANTHER PTHR30349 14 319 1.1E-51 T 19-04-2016 ALIDE2_RS01190 9441309f06151b5554cfaf4c3b43a68c 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 323 5.1E-55 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01190 9441309f06151b5554cfaf4c3b43a68c 328 PIRSF PIRSF017082 1 327 8.5E-59 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS10915 f3d079afb84a65dc3f16a7fcfe17a464 92 Pfam PF11666 Protein of unknown function (DUF2933) 27 76 6.9E-26 T 19-04-2016 IPR021682 Protein of unknown function DUF2933 ALIDE2_RS19650 d86a11ed4881020adca260198f8b379e 336 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 57 333 3.3E-59 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS19650 d86a11ed4881020adca260198f8b379e 336 PANTHER PTHR30349:SF32 35 336 9.8E-60 T 19-04-2016 ALIDE2_RS19650 d86a11ed4881020adca260198f8b379e 336 PIRSF PIRSF017082 1 336 2.7E-64 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS19650 d86a11ed4881020adca260198f8b379e 336 PANTHER PTHR30349 35 336 9.8E-60 T 19-04-2016 ALIDE2_RS01270 cb78deff76da3e32c3c1ec00b234e483 323 SUPERFAMILY SSF53850 114 282 6.71E-11 T 19-04-2016 ALIDE2_RS01270 cb78deff76da3e32c3c1ec00b234e483 323 PANTHER PTHR30349 1 283 2.9E-92 T 19-04-2016 ALIDE2_RS01270 cb78deff76da3e32c3c1ec00b234e483 323 PANTHER PTHR30349:SF16 1 283 2.9E-92 T 19-04-2016 ALIDE2_RS01270 cb78deff76da3e32c3c1ec00b234e483 323 PIRSF PIRSF017082 1 323 8.0E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS01270 cb78deff76da3e32c3c1ec00b234e483 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 318 2.5E-81 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS02455 13914dddc182ce68afb26acfc274620b 219 Gene3D G3DSA:1.10.340.30 22 204 1.4E-74 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 ALIDE2_RS02455 13914dddc182ce68afb26acfc274620b 219 SUPERFAMILY SSF48150 22 204 1.8E-69 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 ALIDE2_RS02455 13914dddc182ce68afb26acfc274620b 219 Pfam PF03352 Methyladenine glycosylase 26 204 5.8E-72 T 19-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 ALIDE2_RS02455 13914dddc182ce68afb26acfc274620b 219 PANTHER PTHR30037 8 219 9.6E-95 T 19-04-2016 ALIDE2_RS02455 13914dddc182ce68afb26acfc274620b 219 PANTHER PTHR30037:SF4 8 219 9.6E-95 T 19-04-2016 ALIDE2_RS06905 4d66e902f9f53574c3ba4918c87ee490 274 PANTHER PTHR30622 2 273 3.7E-126 T 19-04-2016 ALIDE2_RS06905 4d66e902f9f53574c3ba4918c87ee490 274 Pfam PF02673 Bacitracin resistance protein BacA 9 260 4.5E-79 T 19-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ALIDE2_RS06905 4d66e902f9f53574c3ba4918c87ee490 274 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 258 1.3E-70 T 19-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ALIDE2_RS06905 4d66e902f9f53574c3ba4918c87ee490 274 PANTHER PTHR30622:SF3 2 273 3.7E-126 T 19-04-2016 ALIDE2_RS06905 4d66e902f9f53574c3ba4918c87ee490 274 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 265 17.864 T 19-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ALIDE2_RS16355 89d3d35fc87d93b8b14508ca0237be71 134 Gene3D G3DSA:4.10.520.10 37 132 3.4E-14 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ALIDE2_RS16355 89d3d35fc87d93b8b14508ca0237be71 134 SMART SM00411 37 134 0.0037 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS16355 89d3d35fc87d93b8b14508ca0237be71 134 PANTHER PTHR33175 37 132 1.8E-29 T 19-04-2016 ALIDE2_RS16355 89d3d35fc87d93b8b14508ca0237be71 134 PANTHER PTHR33175:SF1 37 132 1.8E-29 T 19-04-2016 ALIDE2_RS16355 89d3d35fc87d93b8b14508ca0237be71 134 Pfam PF00216 Bacterial DNA-binding protein 37 132 6.9E-15 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ALIDE2_RS16355 89d3d35fc87d93b8b14508ca0237be71 134 SUPERFAMILY SSF47729 37 132 7.8E-13 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ALIDE2_RS09620 d625deb15ae5cf51e92f7a9df1f4a073 236 PANTHER PTHR24220 7 228 2.3E-78 T 19-04-2016 ALIDE2_RS09620 d625deb15ae5cf51e92f7a9df1f4a073 236 SUPERFAMILY SSF52540 6 229 1.23E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09620 d625deb15ae5cf51e92f7a9df1f4a073 236 Gene3D G3DSA:3.40.50.300 6 228 2.0E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09620 d625deb15ae5cf51e92f7a9df1f4a073 236 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS09620 d625deb15ae5cf51e92f7a9df1f4a073 236 Pfam PF00005 ABC transporter 25 176 1.9E-31 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS09620 d625deb15ae5cf51e92f7a9df1f4a073 236 SMART SM00382 34 231 5.1E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS07660 622881f4be30948dea333d4f275ac206 377 SUPERFAMILY SSF53822 34 375 8.75E-73 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS07660 622881f4be30948dea333d4f275ac206 377 PANTHER PTHR30483 11 374 3.4E-54 T 19-04-2016 ALIDE2_RS07660 622881f4be30948dea333d4f275ac206 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 71 89 3.1E-9 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS07660 622881f4be30948dea333d4f275ac206 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 52 68 3.1E-9 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS07660 622881f4be30948dea333d4f275ac206 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 30 46 3.1E-9 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS07660 622881f4be30948dea333d4f275ac206 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 284 297 3.1E-9 T 19-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 ALIDE2_RS07660 622881f4be30948dea333d4f275ac206 377 Gene3D G3DSA:3.40.50.2300 153 304 5.3E-28 T 19-04-2016 ALIDE2_RS07660 622881f4be30948dea333d4f275ac206 377 Gene3D G3DSA:3.40.50.2300 305 356 3.8E-36 T 19-04-2016 ALIDE2_RS07660 622881f4be30948dea333d4f275ac206 377 Gene3D G3DSA:3.40.50.2300 24 151 3.8E-36 T 19-04-2016 ALIDE2_RS07660 622881f4be30948dea333d4f275ac206 377 Pfam PF13458 Periplasmic binding protein 35 372 1.2E-55 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS07910 7c9cdcd0bff394826b5c6344729bd71a 505 Gene3D G3DSA:1.20.1600.10 64 102 4.5E-88 T 19-04-2016 ALIDE2_RS07910 7c9cdcd0bff394826b5c6344729bd71a 505 Gene3D G3DSA:1.20.1600.10 379 490 4.5E-88 T 19-04-2016 ALIDE2_RS07910 7c9cdcd0bff394826b5c6344729bd71a 505 Gene3D G3DSA:1.20.1600.10 167 341 4.5E-88 T 19-04-2016 ALIDE2_RS07910 7c9cdcd0bff394826b5c6344729bd71a 505 PANTHER PTHR30203:SF3 1 490 3.3E-114 T 19-04-2016 ALIDE2_RS07910 7c9cdcd0bff394826b5c6344729bd71a 505 SUPERFAMILY SSF56954 6 37 3.53E-104 T 19-04-2016 ALIDE2_RS07910 7c9cdcd0bff394826b5c6344729bd71a 505 SUPERFAMILY SSF56954 67 491 3.53E-104 T 19-04-2016 ALIDE2_RS07910 7c9cdcd0bff394826b5c6344729bd71a 505 Gene3D G3DSA:2.20.200.10 342 377 1.3E-20 T 19-04-2016 ALIDE2_RS07910 7c9cdcd0bff394826b5c6344729bd71a 505 Gene3D G3DSA:2.20.200.10 113 166 1.3E-20 T 19-04-2016 ALIDE2_RS07910 7c9cdcd0bff394826b5c6344729bd71a 505 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 19 490 3.3E-107 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 ALIDE2_RS07910 7c9cdcd0bff394826b5c6344729bd71a 505 PANTHER PTHR30203 1 490 3.3E-114 T 19-04-2016 ALIDE2_RS07910 7c9cdcd0bff394826b5c6344729bd71a 505 Pfam PF02321 Outer membrane efflux protein 311 475 6.5E-27 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS07910 7c9cdcd0bff394826b5c6344729bd71a 505 Pfam PF02321 Outer membrane efflux protein 76 279 3.5E-23 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS17030 e532f0b3c10672a33df47ae0c946247b 576 Gene3D G3DSA:1.10.3720.10 28 285 1.6E-44 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17030 e532f0b3c10672a33df47ae0c946247b 576 SUPERFAMILY SSF161098 23 289 9.06E-50 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17030 e532f0b3c10672a33df47ae0c946247b 576 PANTHER PTHR30183 10 572 7.9E-59 T 19-04-2016 ALIDE2_RS17030 e532f0b3c10672a33df47ae0c946247b 576 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 378 566 3.8E-14 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17030 e532f0b3c10672a33df47ae0c946247b 576 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 281 2.9E-11 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17030 e532f0b3c10672a33df47ae0c946247b 576 SUPERFAMILY SSF161098 304 567 5.89E-49 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS17030 e532f0b3c10672a33df47ae0c946247b 576 Gene3D G3DSA:1.10.3720.10 299 558 1.1E-42 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS18575 4dacfb7d7996044c86a1d9adb6bf55b7 322 PANTHER PTHR33608 5 312 1.3E-53 T 19-04-2016 ALIDE2_RS18575 4dacfb7d7996044c86a1d9adb6bf55b7 322 Pfam PF01882 Protein of unknown function DUF58 46 130 4.1E-20 T 19-04-2016 IPR002881 Domain of unknown function DUF58 ALIDE2_RS01235 aa09e454e1dfee2fd062bded7ea30d14 354 Gene3D G3DSA:3.20.20.70 1 336 2.8E-67 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS01235 aa09e454e1dfee2fd062bded7ea30d14 354 PANTHER PTHR32332:SF12 1 80 1.1E-115 T 19-04-2016 ALIDE2_RS01235 aa09e454e1dfee2fd062bded7ea30d14 354 PANTHER PTHR32332:SF12 106 353 1.1E-115 T 19-04-2016 ALIDE2_RS01235 aa09e454e1dfee2fd062bded7ea30d14 354 PANTHER PTHR32332 1 80 1.1E-115 T 19-04-2016 ALIDE2_RS01235 aa09e454e1dfee2fd062bded7ea30d14 354 PANTHER PTHR32332 106 353 1.1E-115 T 19-04-2016 ALIDE2_RS01235 aa09e454e1dfee2fd062bded7ea30d14 354 Pfam PF03060 Nitronate monooxygenase 5 343 1.1E-77 T 19-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ALIDE2_RS01235 aa09e454e1dfee2fd062bded7ea30d14 354 SUPERFAMILY SSF51412 1 351 7.48E-63 T 19-04-2016 ALIDE2_RS08185 337528ff73ef0321cc6260a096b56491 187 Gene3D G3DSA:3.90.79.10 35 163 3.5E-26 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS08185 337528ff73ef0321cc6260a096b56491 187 PANTHER PTHR22769 6 145 3.2E-23 T 19-04-2016 ALIDE2_RS08185 337528ff73ef0321cc6260a096b56491 187 Pfam PF14803 Nudix N-terminal 6 39 1.1E-9 T 19-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- ALIDE2_RS08185 337528ff73ef0321cc6260a096b56491 187 ProSitePatterns PS00893 Nudix box signature. 75 96 - T 19-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ALIDE2_RS08185 337528ff73ef0321cc6260a096b56491 187 Pfam PF00293 NUDIX domain 46 145 9.3E-13 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ALIDE2_RS08185 337528ff73ef0321cc6260a096b56491 187 Gene3D G3DSA:2.20.70.10 6 34 9.2E-5 T 19-04-2016 ALIDE2_RS08185 337528ff73ef0321cc6260a096b56491 187 SUPERFAMILY SSF55811 6 162 1.0E-29 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS07730 c8d7f6567f1565029de33de36d0f5345 254 SMART SM00382 26 226 1.3E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS07730 c8d7f6567f1565029de33de36d0f5345 254 Gene3D G3DSA:3.40.50.300 1 247 6.5E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07730 c8d7f6567f1565029de33de36d0f5345 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 248 2.2E-13 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALIDE2_RS07730 c8d7f6567f1565029de33de36d0f5345 254 PANTHER PTHR24220 3 248 1.5E-109 T 19-04-2016 ALIDE2_RS07730 c8d7f6567f1565029de33de36d0f5345 254 Pfam PF00005 ABC transporter 18 177 2.6E-26 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS07730 c8d7f6567f1565029de33de36d0f5345 254 PANTHER PTHR24220:SF491 3 248 1.5E-109 T 19-04-2016 ALIDE2_RS07730 c8d7f6567f1565029de33de36d0f5345 254 SUPERFAMILY SSF52540 2 249 5.55E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS21925 10f10343d2f03eefba1eb2e59ee54054 542 Gene3D G3DSA:1.10.287.950 281 486 1.7E-51 T 19-04-2016 ALIDE2_RS21925 10f10343d2f03eefba1eb2e59ee54054 542 Pfam PF02203 Tar ligand binding domain homologue 2 176 8.2E-34 T 19-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS21925 10f10343d2f03eefba1eb2e59ee54054 542 PANTHER PTHR32089:SF63 165 517 3.1E-120 T 19-04-2016 ALIDE2_RS21925 10f10343d2f03eefba1eb2e59ee54054 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 513 4.1E-51 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS21925 10f10343d2f03eefba1eb2e59ee54054 542 SMART SM00283 267 514 8.5E-75 T 19-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ALIDE2_RS21925 10f10343d2f03eefba1eb2e59ee54054 542 Pfam PF00672 HAMP domain 195 262 3.1E-10 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS21925 10f10343d2f03eefba1eb2e59ee54054 542 SMART SM00304 214 266 2.3E-7 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ALIDE2_RS21925 10f10343d2f03eefba1eb2e59ee54054 542 PANTHER PTHR32089 165 517 3.1E-120 T 19-04-2016 ALIDE2_RS21925 10f10343d2f03eefba1eb2e59ee54054 542 SUPERFAMILY SSF58104 234 515 4.58E-64 T 19-04-2016 ALIDE2_RS21925 10f10343d2f03eefba1eb2e59ee54054 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 1.1E-48 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS21925 10f10343d2f03eefba1eb2e59ee54054 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 1.1E-48 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS21925 10f10343d2f03eefba1eb2e59ee54054 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 1.1E-48 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS21925 10f10343d2f03eefba1eb2e59ee54054 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 1.1E-48 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS21925 10f10343d2f03eefba1eb2e59ee54054 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 1.1E-48 T 19-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ALIDE2_RS12205 91dcff2be33f0d7d9cdf240b52ab3587 398 SUPERFAMILY SSF103473 13 388 4.19E-62 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS12205 91dcff2be33f0d7d9cdf240b52ab3587 398 Pfam PF07690 Major Facilitator Superfamily 20 255 5.8E-25 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS12205 91dcff2be33f0d7d9cdf240b52ab3587 398 Gene3D G3DSA:1.20.1250.20 16 202 2.5E-26 T 19-04-2016 ALIDE2_RS12205 91dcff2be33f0d7d9cdf240b52ab3587 398 Gene3D G3DSA:1.20.1250.20 219 388 5.8E-25 T 19-04-2016 ALIDE2_RS12205 91dcff2be33f0d7d9cdf240b52ab3587 398 PANTHER PTHR23518:SF2 9 388 1.7E-110 T 19-04-2016 ALIDE2_RS12205 91dcff2be33f0d7d9cdf240b52ab3587 398 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 87 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ALIDE2_RS12205 91dcff2be33f0d7d9cdf240b52ab3587 398 PANTHER PTHR23518 9 388 1.7E-110 T 19-04-2016 ALIDE2_RS20845 3b495d803a6e9aa10f884b6c9b660f86 241 Pfam PF02108 Flagellar assembly protein FliH 98 223 1.9E-30 T 19-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE ALIDE2_RS20845 3b495d803a6e9aa10f884b6c9b660f86 241 PANTHER PTHR34982 1 241 2.9E-21 T 19-04-2016 ALIDE2_RS07435 f706fcdff382244482a6e6008b2310ac 322 PANTHER PTHR30349:SF1 1 281 6.8E-66 T 19-04-2016 ALIDE2_RS07435 f706fcdff382244482a6e6008b2310ac 322 PANTHER PTHR30349 1 281 6.8E-66 T 19-04-2016 ALIDE2_RS07435 f706fcdff382244482a6e6008b2310ac 322 SUPERFAMILY SSF53850 109 283 4.94E-13 T 19-04-2016 ALIDE2_RS07435 f706fcdff382244482a6e6008b2310ac 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 314 1.7E-73 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS07435 f706fcdff382244482a6e6008b2310ac 322 PIRSF PIRSF017082 1 321 2.0E-73 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS07435 f706fcdff382244482a6e6008b2310ac 322 Gene3D G3DSA:3.40.190.10 122 240 6.4E-7 T 19-04-2016 ALIDE2_RS10220 05e9a553b1bb4404f60e3e72075602d2 258 SUPERFAMILY SSF81301 41 126 7.52E-8 T 19-04-2016 ALIDE2_RS10220 05e9a553b1bb4404f60e3e72075602d2 258 Gene3D G3DSA:3.30.460.10 30 126 5.9E-5 T 19-04-2016 ALIDE2_RS22085 a34bf413e0816bb5fbdc305245ff77bc 623 Pfam PF02705 K+ potassium transporter 13 544 2.9E-203 T 19-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 ALIDE2_RS22085 a34bf413e0816bb5fbdc305245ff77bc 623 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 4 623 33.398 T 19-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup ALIDE2_RS22085 a34bf413e0816bb5fbdc305245ff77bc 623 PANTHER PTHR30540:SF7 7 555 1.8E-215 T 19-04-2016 ALIDE2_RS22085 a34bf413e0816bb5fbdc305245ff77bc 623 PANTHER PTHR30540 7 555 1.8E-215 T 19-04-2016 ALIDE2_RS07835 8d5cf29ac75f3e4eb1531942d4b2e712 428 Pfam PF03743 Bacterial conjugation TrbI-like protein 234 414 1.3E-57 T 19-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI ALIDE2_RS21280 74b0fdafd5866dd824d7efd2d850aca1 647 SUPERFAMILY SSF69593 418 629 6.93E-38 T 19-04-2016 ALIDE2_RS21280 74b0fdafd5866dd824d7efd2d850aca1 647 Pfam PF01553 Acyltransferase 458 589 1.2E-26 T 19-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ALIDE2_RS21280 74b0fdafd5866dd824d7efd2d850aca1 647 SMART SM00563 472 593 7.7E-35 T 19-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ALIDE2_RS21280 74b0fdafd5866dd824d7efd2d850aca1 647 SUPERFAMILY SSF103473 13 442 1.96E-30 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS21280 74b0fdafd5866dd824d7efd2d850aca1 647 PANTHER PTHR10434 362 644 5.6E-98 T 19-04-2016 ALIDE2_RS21280 74b0fdafd5866dd824d7efd2d850aca1 647 PANTHER PTHR10434:SF15 362 644 5.6E-98 T 19-04-2016 ALIDE2_RS21280 74b0fdafd5866dd824d7efd2d850aca1 647 Pfam PF07690 Major Facilitator Superfamily 35 329 3.7E-13 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS21280 74b0fdafd5866dd824d7efd2d850aca1 647 Gene3D G3DSA:3.40.1130.10 461 590 1.4E-19 T 19-04-2016 ALIDE2_RS21280 74b0fdafd5866dd824d7efd2d850aca1 647 Gene3D G3DSA:1.20.1250.20 27 206 3.4E-8 T 19-04-2016 ALIDE2_RS21280 74b0fdafd5866dd824d7efd2d850aca1 647 Gene3D G3DSA:1.20.1250.20 246 441 3.5E-12 T 19-04-2016 ALIDE2_RS06445 d86a983b5da9bd38a6be03d4e89d467a 349 Pfam PF13692 Glycosyl transferases group 1 178 312 1.8E-19 T 19-04-2016 ALIDE2_RS06445 d86a983b5da9bd38a6be03d4e89d467a 349 PANTHER PTHR12526 7 349 2.9E-33 T 19-04-2016 ALIDE2_RS06445 d86a983b5da9bd38a6be03d4e89d467a 349 Gene3D G3DSA:3.40.50.2000 182 322 3.2E-10 T 19-04-2016 ALIDE2_RS06445 d86a983b5da9bd38a6be03d4e89d467a 349 Pfam PF13477 Glycosyl transferase 4-like 4 130 6.0E-23 T 19-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ALIDE2_RS06445 d86a983b5da9bd38a6be03d4e89d467a 349 SUPERFAMILY SSF53756 15 348 1.75E-54 T 19-04-2016 ALIDE2_RS05480 34419c82551e0be12efd26d572159315 211 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 205 2.1E-53 T 19-04-2016 IPR006070 YrdC-like domain GO:0003725 ALIDE2_RS05480 34419c82551e0be12efd26d572159315 211 PANTHER PTHR17490:SF7 1 207 1.8E-73 T 19-04-2016 ALIDE2_RS05480 34419c82551e0be12efd26d572159315 211 PANTHER PTHR17490 1 207 1.8E-73 T 19-04-2016 ALIDE2_RS05480 34419c82551e0be12efd26d572159315 211 Gene3D G3DSA:3.90.870.10 2 208 2.3E-58 T 19-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain ALIDE2_RS05480 34419c82551e0be12efd26d572159315 211 SUPERFAMILY SSF55821 1 207 1.13E-58 T 19-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain ALIDE2_RS05480 34419c82551e0be12efd26d572159315 211 Pfam PF01300 Telomere recombination 23 202 4.2E-40 T 19-04-2016 IPR006070 YrdC-like domain GO:0003725 ALIDE2_RS01390 9df4c8d5c48e3c3598689494d0670e91 287 Pfam PF00561 alpha/beta hydrolase fold 31 262 3.1E-30 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS01390 9df4c8d5c48e3c3598689494d0670e91 287 PANTHER PTHR10992 18 276 7.0E-52 T 19-04-2016 ALIDE2_RS01390 9df4c8d5c48e3c3598689494d0670e91 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 2.4E-28 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS01390 9df4c8d5c48e3c3598689494d0670e91 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 2.4E-28 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS01390 9df4c8d5c48e3c3598689494d0670e91 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 220 234 2.4E-28 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS01390 9df4c8d5c48e3c3598689494d0670e91 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 2.4E-28 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS01390 9df4c8d5c48e3c3598689494d0670e91 287 SUPERFAMILY SSF53474 5 275 2.24E-70 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS01390 9df4c8d5c48e3c3598689494d0670e91 287 Gene3D G3DSA:3.40.50.1820 12 276 5.5E-72 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS12535 1f59b293c6692f0f452f1036f50ced31 256 PANTHER PTHR11941 6 253 3.4E-72 T 19-04-2016 ALIDE2_RS12535 1f59b293c6692f0f452f1036f50ced31 256 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS12535 1f59b293c6692f0f452f1036f50ced31 256 SUPERFAMILY SSF52096 4 256 8.79E-74 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS12535 1f59b293c6692f0f452f1036f50ced31 256 Gene3D G3DSA:3.90.226.10 6 250 1.2E-73 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS12535 1f59b293c6692f0f452f1036f50ced31 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 255 3.4E-49 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS01905 0937f547d474a2cf631a0afe38d099b3 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 3.0E-28 T 19-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 ALIDE2_RS01905 0937f547d474a2cf631a0afe38d099b3 138 Gene3D G3DSA:2.60.15.10 1 89 3.1E-30 T 19-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 ALIDE2_RS01905 0937f547d474a2cf631a0afe38d099b3 138 Gene3D G3DSA:1.20.5.440 90 132 2.1E-7 T 19-04-2016 ALIDE2_RS01905 0937f547d474a2cf631a0afe38d099b3 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 1.8E-40 T 19-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 ALIDE2_RS01905 0937f547d474a2cf631a0afe38d099b3 138 PANTHER PTHR13822 1 135 4.8E-43 T 19-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 ALIDE2_RS01905 0937f547d474a2cf631a0afe38d099b3 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 21.068 T 19-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 ALIDE2_RS01905 0937f547d474a2cf631a0afe38d099b3 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 2.0E-36 T 19-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 ALIDE2_RS01905 0937f547d474a2cf631a0afe38d099b3 138 SUPERFAMILY SSF46604 87 135 3.14E-9 T 19-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain ALIDE2_RS01905 0937f547d474a2cf631a0afe38d099b3 138 SUPERFAMILY SSF51344 2 85 4.58E-24 T 19-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 ALIDE2_RS08980 afcbf9a1eb2d283e7ae9dc72da7a8976 230 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 207 1.1E-100 T 19-04-2016 IPR021548 Protein of unknown function DUF2895 ALIDE2_RS08980 afcbf9a1eb2d283e7ae9dc72da7a8976 230 Pfam PF11444 Protein of unknown function (DUF2895) 6 206 7.9E-93 T 19-04-2016 IPR021548 Protein of unknown function DUF2895 ALIDE2_RS20285 4e940f25b42f1afd0e770c94bf84813f 366 Gene3D G3DSA:1.10.287.110 200 240 6.1E-8 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS20285 4e940f25b42f1afd0e770c94bf84813f 366 SUPERFAMILY SSF46565 201 240 4.45E-7 T 19-04-2016 IPR001623 DnaJ domain ALIDE2_RS00300 b82a2903470748fcf91e61891ad8c1d3 256 PRINTS PR00091 Nitrogenase component II signature 31 46 9.9E-5 T 19-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 ALIDE2_RS00300 b82a2903470748fcf91e61891ad8c1d3 256 PRINTS PR00091 Nitrogenase component II signature 9 22 9.9E-5 T 19-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 ALIDE2_RS00300 b82a2903470748fcf91e61891ad8c1d3 256 Pfam PF13614 AAA domain 3 178 2.0E-63 T 19-04-2016 IPR025669 AAA domain ALIDE2_RS00300 b82a2903470748fcf91e61891ad8c1d3 256 SUPERFAMILY SSF52540 1 254 6.9E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00300 b82a2903470748fcf91e61891ad8c1d3 256 PANTHER PTHR13696 1 256 1.3E-82 T 19-04-2016 ALIDE2_RS00300 b82a2903470748fcf91e61891ad8c1d3 256 PANTHER PTHR13696:SF52 1 256 1.3E-82 T 19-04-2016 ALIDE2_RS00300 b82a2903470748fcf91e61891ad8c1d3 256 Gene3D G3DSA:3.40.50.300 3 254 2.8E-67 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05280 adecaddce7118620c31404f308b08869 288 PANTHER PTHR30592:SF2 15 282 1.9E-114 T 19-04-2016 ALIDE2_RS05280 adecaddce7118620c31404f308b08869 288 Gene3D G3DSA:3.10.20.10 47 128 5.3E-16 T 19-04-2016 ALIDE2_RS05280 adecaddce7118620c31404f308b08869 288 Gene3D G3DSA:3.40.140.10 145 286 1.1E-54 T 19-04-2016 ALIDE2_RS05280 adecaddce7118620c31404f308b08869 288 Pfam PF02634 FdhD/NarQ family 46 281 6.9E-77 T 19-04-2016 IPR003786 Protein FdhD GO:0016783 ALIDE2_RS05280 adecaddce7118620c31404f308b08869 288 PIRSF PIRSF015626 6 286 1.5E-73 T 19-04-2016 IPR003786 Protein FdhD GO:0016783 ALIDE2_RS05280 adecaddce7118620c31404f308b08869 288 SUPERFAMILY SSF53927 28 282 3.01E-68 T 19-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 ALIDE2_RS05280 adecaddce7118620c31404f308b08869 288 PANTHER PTHR30592 15 282 1.9E-114 T 19-04-2016 ALIDE2_RS06285 d2ee4d2c276a25501ced28d12a6c01b1 343 Pfam PF02504 Fatty acid synthesis protein 3 320 6.6E-100 T 19-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 ALIDE2_RS06285 d2ee4d2c276a25501ced28d12a6c01b1 343 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 330 2.4E-105 T 19-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 ALIDE2_RS06285 d2ee4d2c276a25501ced28d12a6c01b1 343 PIRSF PIRSF002465 1 333 5.1E-124 T 19-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 ALIDE2_RS06285 d2ee4d2c276a25501ced28d12a6c01b1 343 PANTHER PTHR30100:SF1 1 337 3.2E-127 T 19-04-2016 ALIDE2_RS06285 d2ee4d2c276a25501ced28d12a6c01b1 343 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 335 151.343 T 19-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 ALIDE2_RS06285 d2ee4d2c276a25501ced28d12a6c01b1 343 SUPERFAMILY SSF53659 1 329 3.41E-102 T 19-04-2016 ALIDE2_RS06285 d2ee4d2c276a25501ced28d12a6c01b1 343 Gene3D G3DSA:3.40.718.10 1 329 1.3E-130 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 ALIDE2_RS06285 d2ee4d2c276a25501ced28d12a6c01b1 343 PANTHER PTHR30100 1 337 3.2E-127 T 19-04-2016 ALIDE2_RS22800 7e07bb6792dd653b7b62ddbeb4c05a00 508 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 505 27.375 T 19-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 ALIDE2_RS22800 7e07bb6792dd653b7b62ddbeb4c05a00 508 PANTHER PTHR22726:SF10 4 292 2.3E-53 T 19-04-2016 ALIDE2_RS22800 7e07bb6792dd653b7b62ddbeb4c05a00 508 Pfam PF01435 Peptidase family M48 94 260 4.7E-27 T 19-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ALIDE2_RS22800 7e07bb6792dd653b7b62ddbeb4c05a00 508 PANTHER PTHR22726 4 292 2.3E-53 T 19-04-2016 ALIDE2_RS22800 7e07bb6792dd653b7b62ddbeb4c05a00 508 Gene3D G3DSA:3.30.2010.10 64 153 7.2E-16 T 19-04-2016 ALIDE2_RS22800 7e07bb6792dd653b7b62ddbeb4c05a00 508 Gene3D G3DSA:1.25.40.10 313 450 9.6E-5 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ALIDE2_RS07785 e6a3f9957fb93fd9f28e76482909b147 625 Pfam PF00580 UvrD/REP helicase N-terminal domain 169 241 1.6E-8 T 19-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 ALIDE2_RS07785 e6a3f9957fb93fd9f28e76482909b147 625 Gene3D G3DSA:3.40.50.300 508 595 2.2E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07785 e6a3f9957fb93fd9f28e76482909b147 625 SUPERFAMILY SSF52540 24 485 1.43E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07785 e6a3f9957fb93fd9f28e76482909b147 625 SUPERFAMILY SSF52540 573 600 1.43E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07785 e6a3f9957fb93fd9f28e76482909b147 625 SUPERFAMILY SSF52540 515 541 1.43E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07785 e6a3f9957fb93fd9f28e76482909b147 625 Pfam PF13245 Part of AAA domain 29 95 1.1E-7 T 19-04-2016 ALIDE2_RS07785 e6a3f9957fb93fd9f28e76482909b147 625 Gene3D G3DSA:3.40.50.300 24 241 6.6E-33 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07785 e6a3f9957fb93fd9f28e76482909b147 625 PANTHER PTHR11070 31 241 5.5E-20 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 ALIDE2_RS20280 e18ae52b4f4c0aa37e13551ffd538e52 306 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 300 2.5E-120 T 19-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 ALIDE2_RS20280 e18ae52b4f4c0aa37e13551ffd538e52 306 Gene3D G3DSA:3.40.50.1100 133 299 3.2E-62 T 19-04-2016 ALIDE2_RS20280 e18ae52b4f4c0aa37e13551ffd538e52 306 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 300 4.3E-116 T 19-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 ALIDE2_RS20280 e18ae52b4f4c0aa37e13551ffd538e52 306 PANTHER PTHR10314:SF110 3 298 7.4E-130 T 19-04-2016 ALIDE2_RS20280 e18ae52b4f4c0aa37e13551ffd538e52 306 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 19-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 ALIDE2_RS20280 e18ae52b4f4c0aa37e13551ffd538e52 306 PANTHER PTHR10314 3 298 7.4E-130 T 19-04-2016 ALIDE2_RS20280 e18ae52b4f4c0aa37e13551ffd538e52 306 Gene3D G3DSA:3.40.50.1100 36 132 1.5E-43 T 19-04-2016 ALIDE2_RS20280 e18ae52b4f4c0aa37e13551ffd538e52 306 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 286 4.1E-67 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS20280 e18ae52b4f4c0aa37e13551ffd538e52 306 SUPERFAMILY SSF53686 2 299 8.77E-93 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALIDE2_RS10810 e8f62e301ed0ceb718d43aa728bed2c3 78 Gene3D G3DSA:1.10.260.40 1 50 1.5E-6 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS10810 e8f62e301ed0ceb718d43aa728bed2c3 78 SUPERFAMILY SSF47413 1 47 2.95E-5 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS02210 d27354ddcbab23292370793fd0007ae7 307 PANTHER PTHR40277 1 301 1.3E-28 T 19-04-2016 ALIDE2_RS02210 d27354ddcbab23292370793fd0007ae7 307 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 12 292 1.6E-44 T 19-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD ALIDE2_RS06555 319f6ea255d16613368f90d8d491739c 135 PIRSF PIRSF037181 1 134 6.8E-48 T 19-04-2016 IPR014958 DGC ALIDE2_RS06555 319f6ea255d16613368f90d8d491739c 135 Pfam PF08859 DGC domain 16 118 2.3E-32 T 19-04-2016 IPR014958 DGC ALIDE2_RS18810 d2716c479c19e8862ac166bb2a6c3d0f 96 Pfam PF07045 Domain of unknown function (DUF1330) 3 96 8.4E-37 T 19-04-2016 IPR010753 Domain of unknown function DUF1330 ALIDE2_RS18810 d2716c479c19e8862ac166bb2a6c3d0f 96 PANTHER PTHR41521 1 96 2.0E-18 T 19-04-2016 ALIDE2_RS18810 d2716c479c19e8862ac166bb2a6c3d0f 96 SUPERFAMILY SSF54909 1 96 1.16E-30 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel ALIDE2_RS18810 d2716c479c19e8862ac166bb2a6c3d0f 96 Gene3D G3DSA:3.30.70.900 1 96 3.9E-36 T 19-04-2016 ALIDE2_RS14240 185be019d9c7c08ae5521e3e536ceec0 289 PANTHER PTHR13696 32 288 5.6E-72 T 19-04-2016 ALIDE2_RS14240 185be019d9c7c08ae5521e3e536ceec0 289 PIRSF PIRSF003092 20 286 6.5E-78 T 19-04-2016 IPR025501 ATP binding protein MinD ALIDE2_RS14240 185be019d9c7c08ae5521e3e536ceec0 289 PANTHER PTHR13696:SF3 32 288 5.6E-72 T 19-04-2016 ALIDE2_RS14240 185be019d9c7c08ae5521e3e536ceec0 289 Gene3D G3DSA:3.40.50.300 32 278 2.0E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14240 185be019d9c7c08ae5521e3e536ceec0 289 SUPERFAMILY SSF52540 32 282 3.94E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14240 185be019d9c7c08ae5521e3e536ceec0 289 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 35 216 1.1E-27 T 19-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE2_RS17865 9bd16200ce0cd995f4631edf8f9c5c8a 227 Gene3D G3DSA:1.10.340.30 37 138 5.6E-22 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 ALIDE2_RS17865 9bd16200ce0cd995f4631edf8f9c5c8a 227 Pfam PF03352 Methyladenine glycosylase 40 131 4.0E-14 T 19-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 ALIDE2_RS17865 9bd16200ce0cd995f4631edf8f9c5c8a 227 PANTHER PTHR30037 176 208 7.7E-68 T 19-04-2016 ALIDE2_RS17865 9bd16200ce0cd995f4631edf8f9c5c8a 227 PANTHER PTHR30037 1 158 7.7E-68 T 19-04-2016 ALIDE2_RS17865 9bd16200ce0cd995f4631edf8f9c5c8a 227 SUPERFAMILY SSF48150 38 184 2.04E-31 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 ALIDE2_RS17865 9bd16200ce0cd995f4631edf8f9c5c8a 227 PANTHER PTHR30037:SF3 176 208 7.7E-68 T 19-04-2016 ALIDE2_RS17865 9bd16200ce0cd995f4631edf8f9c5c8a 227 PANTHER PTHR30037:SF3 1 158 7.7E-68 T 19-04-2016 ALIDE2_RS08325 bd9652ffd3f7579015015494603d325a 694 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 48 683 1.2E-195 T 19-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily ALIDE2_RS08325 bd9652ffd3f7579015015494603d325a 694 ProSitePatterns PS00018 EF-hand calcium-binding domain. 481 493 - T 19-04-2016 IPR018247 EF-Hand 1, calcium-binding site ALIDE2_RS08325 bd9652ffd3f7579015015494603d325a 694 PANTHER PTHR11819 481 687 3.5E-146 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS08325 bd9652ffd3f7579015015494603d325a 694 PANTHER PTHR11819 374 451 3.5E-146 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS08325 bd9652ffd3f7579015015494603d325a 694 PANTHER PTHR11819 11 39 3.5E-146 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS08325 bd9652ffd3f7579015015494603d325a 694 PANTHER PTHR11819 64 276 3.5E-146 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS08325 bd9652ffd3f7579015015494603d325a 694 PANTHER PTHR11819:SF159 481 687 3.5E-146 T 19-04-2016 ALIDE2_RS08325 bd9652ffd3f7579015015494603d325a 694 PANTHER PTHR11819:SF159 374 451 3.5E-146 T 19-04-2016 ALIDE2_RS08325 bd9652ffd3f7579015015494603d325a 694 PANTHER PTHR11819:SF159 11 39 3.5E-146 T 19-04-2016 ALIDE2_RS08325 bd9652ffd3f7579015015494603d325a 694 PANTHER PTHR11819:SF159 64 276 3.5E-146 T 19-04-2016 ALIDE2_RS08325 bd9652ffd3f7579015015494603d325a 694 Pfam PF00474 Sodium:solute symporter family 510 625 1.9E-17 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS08325 bd9652ffd3f7579015015494603d325a 694 Pfam PF00474 Sodium:solute symporter family 72 237 3.9E-29 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ALIDE2_RS03895 df1498518ab0ed1a5097fa3a7e925230 326 PANTHER PTHR30349:SF32 8 290 5.2E-75 T 19-04-2016 ALIDE2_RS03895 df1498518ab0ed1a5097fa3a7e925230 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 321 3.8E-73 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS03895 df1498518ab0ed1a5097fa3a7e925230 326 PANTHER PTHR30349 8 290 5.2E-75 T 19-04-2016 ALIDE2_RS03895 df1498518ab0ed1a5097fa3a7e925230 326 PIRSF PIRSF017082 1 325 1.0E-73 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS03895 df1498518ab0ed1a5097fa3a7e925230 326 SUPERFAMILY SSF53850 114 287 2.26E-12 T 19-04-2016 ALIDE2_RS07720 81af749998ebbb1b9e0cf914b1cbd517 287 PANTHER PTHR11795 1 282 1.1E-95 T 19-04-2016 ALIDE2_RS07720 81af749998ebbb1b9e0cf914b1cbd517 287 PANTHER PTHR11795:SF371 1 282 1.1E-95 T 19-04-2016 ALIDE2_RS07720 81af749998ebbb1b9e0cf914b1cbd517 287 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 274 6.1E-48 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS02750 780f576f1a1b3ffde0349988a30cd00d 387 SMART SM01119 275 366 3.3E-30 T 19-04-2016 IPR026956 D-serine dehydratase-like domain ALIDE2_RS02750 780f576f1a1b3ffde0349988a30cd00d 387 Pfam PF14031 Putative serine dehydratase domain 275 364 3.6E-19 T 19-04-2016 IPR026956 D-serine dehydratase-like domain ALIDE2_RS02750 780f576f1a1b3ffde0349988a30cd00d 387 Pfam PF01168 Alanine racemase, N-terminal domain 24 258 1.7E-28 T 19-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 ALIDE2_RS02750 780f576f1a1b3ffde0349988a30cd00d 387 PANTHER PTHR28004 10 387 6.2E-123 T 19-04-2016 ALIDE2_RS02750 780f576f1a1b3ffde0349988a30cd00d 387 PANTHER PTHR28004:SF3 10 387 6.2E-123 T 19-04-2016 ALIDE2_RS02750 780f576f1a1b3ffde0349988a30cd00d 387 SUPERFAMILY SSF51419 24 270 3.18E-35 T 19-04-2016 IPR029066 PLP-binding barrel ALIDE2_RS02750 780f576f1a1b3ffde0349988a30cd00d 387 Gene3D G3DSA:3.20.20.10 26 234 6.4E-18 T 19-04-2016 IPR029066 PLP-binding barrel ALIDE2_RS05655 2dd23c9ca5a6550df98678eea5e94eef 79 Gene3D G3DSA:1.20.58.60 11 62 9.9E-4 T 19-04-2016 ALIDE2_RS16705 1a2767d1cef2686f74e9c2d8dce1205c 294 PANTHER PTHR30373:SF2 8 294 1.4E-71 T 19-04-2016 ALIDE2_RS16705 1a2767d1cef2686f74e9c2d8dce1205c 294 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 43 166 6.4E-35 T 19-04-2016 IPR007621 TPM domain ALIDE2_RS16705 1a2767d1cef2686f74e9c2d8dce1205c 294 PANTHER PTHR30373 8 294 1.4E-71 T 19-04-2016 ALIDE2_RS06680 b07625619c4e4d203e99f05a9e781629 141 PANTHER PTHR33121 1 129 1.1E-12 T 19-04-2016 ALIDE2_RS06680 b07625619c4e4d203e99f05a9e781629 141 Gene3D G3DSA:3.20.20.450 11 135 6.9E-26 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS06680 b07625619c4e4d203e99f05a9e781629 141 SUPERFAMILY SSF141868 11 136 3.79E-29 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS06680 b07625619c4e4d203e99f05a9e781629 141 Pfam PF00563 EAL domain 10 129 3.0E-21 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS06680 b07625619c4e4d203e99f05a9e781629 141 PANTHER PTHR33121:SF10 1 129 1.1E-12 T 19-04-2016 ALIDE2_RS12090 306233db6ad2e323ca1b20cf9ff408cb 165 PANTHER PTHR32552 21 156 3.4E-53 T 19-04-2016 ALIDE2_RS12090 306233db6ad2e323ca1b20cf9ff408cb 165 SUPERFAMILY SSF53098 23 157 2.28E-33 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS12090 306233db6ad2e323ca1b20cf9ff408cb 165 Pfam PF13683 Integrase core domain 87 152 1.3E-27 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 ALIDE2_RS12090 306233db6ad2e323ca1b20cf9ff408cb 165 Gene3D G3DSA:3.30.420.10 23 152 3.2E-35 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS12090 306233db6ad2e323ca1b20cf9ff408cb 165 PANTHER PTHR32552:SF26 21 156 3.4E-53 T 19-04-2016 ALIDE2_RS01815 57f00a105db72ec8f0f407d41412dd06 164 Pfam PF00583 Acetyltransferase (GNAT) family 62 142 1.3E-13 T 19-04-2016 IPR000182 GNAT domain GO:0008080 ALIDE2_RS01815 57f00a105db72ec8f0f407d41412dd06 164 SUPERFAMILY SSF55729 14 154 2.23E-27 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS01815 57f00a105db72ec8f0f407d41412dd06 164 PANTHER PTHR10545 10 163 1.4E-40 T 19-04-2016 ALIDE2_RS01815 57f00a105db72ec8f0f407d41412dd06 164 Gene3D G3DSA:3.40.630.30 12 152 4.0E-35 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS01815 57f00a105db72ec8f0f407d41412dd06 164 PANTHER PTHR10545:SF38 10 163 1.4E-40 T 19-04-2016 ALIDE2_RS20570 249390e85f18d581f024cf5773bdcac9 399 Gene3D G3DSA:3.40.50.2300 28 231 6.2E-53 T 19-04-2016 ALIDE2_RS20570 249390e85f18d581f024cf5773bdcac9 399 Pfam PF13458 Periplasmic binding protein 29 378 2.6E-63 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS20570 249390e85f18d581f024cf5773bdcac9 399 SUPERFAMILY SSF53822 29 383 2.59E-76 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS20570 249390e85f18d581f024cf5773bdcac9 399 PANTHER PTHR30483 4 378 1.1E-68 T 19-04-2016 ALIDE2_RS13905 11b0ef26e835c989e2358baa8088af83 234 SUPERFAMILY SSF103088 122 226 8.89E-21 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS13905 11b0ef26e835c989e2358baa8088af83 234 PANTHER PTHR30128 125 233 3.2E-13 T 19-04-2016 ALIDE2_RS13905 11b0ef26e835c989e2358baa8088af83 234 Gene3D G3DSA:3.30.1330.60 123 225 5.3E-21 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS13905 11b0ef26e835c989e2358baa8088af83 234 Pfam PF00691 OmpA family 127 220 5.3E-11 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS22765 9c95b6cbf9ada245f10613bca8d7f844 101 Pfam PF09413 Putative prokaryotic signal transducing protein 1 69 3.3E-8 T 19-04-2016 IPR018551 Domain of unknown function DUF2007 ALIDE2_RS22765 9c95b6cbf9ada245f10613bca8d7f844 101 Gene3D G3DSA:3.30.70.790 1 69 6.4E-4 T 19-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 ALIDE2_RS12745 f36854f5792af540ecc0ea72af0b5e07 319 PANTHER PTHR10625 16 318 1.1E-96 T 19-04-2016 IPR000286 Histone deacetylase superfamily ALIDE2_RS12745 f36854f5792af540ecc0ea72af0b5e07 319 PANTHER PTHR10625:SF104 16 318 1.1E-96 T 19-04-2016 ALIDE2_RS12745 f36854f5792af540ecc0ea72af0b5e07 319 SUPERFAMILY SSF52768 4 318 3.98E-103 T 19-04-2016 ALIDE2_RS12745 f36854f5792af540ecc0ea72af0b5e07 319 Gene3D G3DSA:3.40.800.20 5 317 1.2E-105 T 19-04-2016 IPR023801 Histone deacetylase domain ALIDE2_RS12745 f36854f5792af540ecc0ea72af0b5e07 319 PRINTS PR01270 Histone deacetylase superfamily signature 246 256 1.0E-17 T 19-04-2016 IPR000286 Histone deacetylase superfamily ALIDE2_RS12745 f36854f5792af540ecc0ea72af0b5e07 319 PRINTS PR01270 Histone deacetylase superfamily signature 134 157 1.0E-17 T 19-04-2016 IPR000286 Histone deacetylase superfamily ALIDE2_RS12745 f36854f5792af540ecc0ea72af0b5e07 319 PRINTS PR01270 Histone deacetylase superfamily signature 168 183 1.0E-17 T 19-04-2016 IPR000286 Histone deacetylase superfamily ALIDE2_RS12745 f36854f5792af540ecc0ea72af0b5e07 319 Pfam PF00850 Histone deacetylase domain 23 316 1.2E-82 T 19-04-2016 IPR023801 Histone deacetylase domain ALIDE2_RS16130 816b78c9a83436336d155f56cbb6ad1d 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS16130 816b78c9a83436336d155f56cbb6ad1d 545 Gene3D G3DSA:3.40.50.980 190 342 6.9E-32 T 19-04-2016 ALIDE2_RS16130 816b78c9a83436336d155f56cbb6ad1d 545 PANTHER PTHR24096:SF53 1 537 9.7E-239 T 19-04-2016 ALIDE2_RS16130 816b78c9a83436336d155f56cbb6ad1d 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 527 3.9E-14 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS16130 816b78c9a83436336d155f56cbb6ad1d 545 Pfam PF00501 AMP-binding enzyme 31 443 1.4E-82 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS16130 816b78c9a83436336d155f56cbb6ad1d 545 Gene3D G3DSA:2.30.38.10 360 437 1.5E-15 T 19-04-2016 ALIDE2_RS16130 816b78c9a83436336d155f56cbb6ad1d 545 SUPERFAMILY SSF56801 6 539 1.09E-127 T 19-04-2016 ALIDE2_RS16130 816b78c9a83436336d155f56cbb6ad1d 545 Gene3D G3DSA:3.40.50.980 22 189 1.4E-25 T 19-04-2016 ALIDE2_RS16130 816b78c9a83436336d155f56cbb6ad1d 545 PANTHER PTHR24096 1 537 9.7E-239 T 19-04-2016 ALIDE2_RS16130 816b78c9a83436336d155f56cbb6ad1d 545 Gene3D G3DSA:3.30.300.30 438 537 2.0E-25 T 19-04-2016 ALIDE2_RS08765 4a543b8a22ef97bddef896b57a359676 183 Pfam PF12101 Protein of unknown function (DUF3577) 4 132 6.8E-60 T 19-04-2016 IPR021960 Protein of unknown function DUF3577 ALIDE2_RS11750 05884f1b440da822ec367f61da61e92e 126 Pfam PF01903 CbiX 13 117 2.4E-29 T 19-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 ALIDE2_RS11750 05884f1b440da822ec367f61da61e92e 126 SUPERFAMILY SSF53800 6 121 1.06E-32 T 19-04-2016 ALIDE2_RS11750 05884f1b440da822ec367f61da61e92e 126 Gene3D G3DSA:3.40.50.1400 6 122 2.0E-36 T 19-04-2016 ALIDE2_RS11750 05884f1b440da822ec367f61da61e92e 126 PANTHER PTHR33542 7 118 2.2E-21 T 19-04-2016 ALIDE2_RS08010 a609211a9c32970da5828854f1c325e3 165 SMART SM00226 7 145 7.3E-32 T 19-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily ALIDE2_RS08010 a609211a9c32970da5828854f1c325e3 165 PANTHER PTHR11717 10 162 4.7E-33 T 19-04-2016 ALIDE2_RS08010 a609211a9c32970da5828854f1c325e3 165 SUPERFAMILY SSF52788 7 145 1.83E-38 T 19-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily ALIDE2_RS08010 a609211a9c32970da5828854f1c325e3 165 Gene3D G3DSA:3.40.50.270 5 143 1.8E-38 T 19-04-2016 ALIDE2_RS08010 a609211a9c32970da5828854f1c325e3 165 PANTHER PTHR11717:SF18 10 162 4.7E-33 T 19-04-2016 ALIDE2_RS08010 a609211a9c32970da5828854f1c325e3 165 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 10 133 5.4E-17 T 19-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily ALIDE2_RS21320 06db1a33945f6d9240314f7a247795b2 196 Gene3D G3DSA:1.20.1290.10 79 194 1.4E-38 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS21320 06db1a33945f6d9240314f7a247795b2 196 Pfam PF02627 Carboxymuconolactone decarboxylase family 66 141 3.2E-15 T 19-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS21320 06db1a33945f6d9240314f7a247795b2 196 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 78 107 4.3E-10 T 19-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS21320 06db1a33945f6d9240314f7a247795b2 196 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 22 195 1.2E-58 T 19-04-2016 IPR010195 Uncharacterised peroxidase-related ALIDE2_RS21320 06db1a33945f6d9240314f7a247795b2 196 SUPERFAMILY SSF69118 17 192 1.44E-45 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS21320 06db1a33945f6d9240314f7a247795b2 196 PANTHER PTHR35446:SF2 55 192 1.0E-34 T 19-04-2016 ALIDE2_RS21320 06db1a33945f6d9240314f7a247795b2 196 PANTHER PTHR35446 55 192 1.0E-34 T 19-04-2016 ALIDE2_RS00215 324f2c7495d18a70061c6a6f9eade305 141 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 11 135 3.5E-46 T 19-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 ALIDE2_RS00215 324f2c7495d18a70061c6a6f9eade305 141 Gene3D G3DSA:1.10.1660.10 64 138 1.1E-32 T 19-04-2016 ALIDE2_RS00215 324f2c7495d18a70061c6a6f9eade305 141 SUPERFAMILY SSF46955 12 135 1.14E-37 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS00215 324f2c7495d18a70061c6a6f9eade305 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 11 22 4.8E-12 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS00215 324f2c7495d18a70061c6a6f9eade305 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 46 66 4.8E-12 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS00215 324f2c7495d18a70061c6a6f9eade305 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 22 35 4.8E-12 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS00215 324f2c7495d18a70061c6a6f9eade305 141 Pfam PF00376 MerR family regulatory protein 12 48 3.6E-13 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS00215 324f2c7495d18a70061c6a6f9eade305 141 SMART SM00422 10 79 8.9E-30 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS00215 324f2c7495d18a70061c6a6f9eade305 141 Pfam PF09278 MerR, DNA binding 53 117 1.3E-20 T 19-04-2016 IPR015358 Transcription regulator MerR, DNA binding ALIDE2_RS00215 324f2c7495d18a70061c6a6f9eade305 141 Gene3D G3DSA:1.10.1660.10 12 63 6.6E-25 T 19-04-2016 ALIDE2_RS00215 324f2c7495d18a70061c6a6f9eade305 141 PANTHER PTHR30204 2 137 4.3E-49 T 19-04-2016 ALIDE2_RS00215 324f2c7495d18a70061c6a6f9eade305 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 13 35 - T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS00215 324f2c7495d18a70061c6a6f9eade305 141 PANTHER PTHR30204:SF16 2 137 4.3E-49 T 19-04-2016 ALIDE2_RS04055 b9202218bdcff5a4fd4c7b3695cfbe0a 434 Pfam PF11902 Protein of unknown function (DUF3422) 9 429 4.6E-155 T 19-04-2016 IPR021830 Protein of unknown function DUF3422 ALIDE2_RS15710 5782e8a4cc2035f6fcb93dc1d0803745 67 SUPERFAMILY SSF46955 17 62 8.79E-5 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS00355 e13b5edeb647a474f232dc6ccc82ebbc 140 PANTHER PTHR12418 1 138 1.1E-51 T 19-04-2016 ALIDE2_RS00355 e13b5edeb647a474f232dc6ccc82ebbc 140 Pfam PF03061 Thioesterase superfamily 51 128 1.3E-17 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS00355 e13b5edeb647a474f232dc6ccc82ebbc 140 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 135 4.1E-36 T 19-04-2016 IPR003736 Phenylacetic acid degradation-related domain ALIDE2_RS00355 e13b5edeb647a474f232dc6ccc82ebbc 140 PANTHER PTHR12418:SF33 1 138 1.1E-51 T 19-04-2016 ALIDE2_RS00355 e13b5edeb647a474f232dc6ccc82ebbc 140 Gene3D G3DSA:3.10.129.10 1 139 3.8E-49 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS00355 e13b5edeb647a474f232dc6ccc82ebbc 140 SUPERFAMILY SSF54637 1 139 1.81E-32 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS17660 83fbded9df7bdb367bde79ab6786b1be 248 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS17660 83fbded9df7bdb367bde79ab6786b1be 248 PANTHER PTHR24220 3 241 6.7E-139 T 19-04-2016 ALIDE2_RS17660 83fbded9df7bdb367bde79ab6786b1be 248 PIRSF PIRSF039085 1 241 8.0E-118 T 19-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ALIDE2_RS17660 83fbded9df7bdb367bde79ab6786b1be 248 SMART SM00382 26 213 1.9E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS17660 83fbded9df7bdb367bde79ab6786b1be 248 PANTHER PTHR24220:SF550 3 241 6.7E-139 T 19-04-2016 ALIDE2_RS17660 83fbded9df7bdb367bde79ab6786b1be 248 Pfam PF00005 ABC transporter 17 165 1.9E-34 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS17660 83fbded9df7bdb367bde79ab6786b1be 248 SUPERFAMILY SSF52540 1 235 4.24E-78 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17660 83fbded9df7bdb367bde79ab6786b1be 248 Gene3D G3DSA:3.40.50.300 1 236 3.4E-84 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS13000 08ccd49070bcba86a9a8cb66b5db17fb 413 PANTHER PTHR23028 34 391 1.9E-70 T 19-04-2016 ALIDE2_RS13000 08ccd49070bcba86a9a8cb66b5db17fb 413 Pfam PF01757 Acyltransferase family 60 359 6.8E-25 T 19-04-2016 IPR002656 Acyltransferase 3 GO:0016747 ALIDE2_RS13000 08ccd49070bcba86a9a8cb66b5db17fb 413 PANTHER PTHR23028:SF53 34 391 1.9E-70 T 19-04-2016 ALIDE2_RS12440 a4e51aabf55b3cab5ff50849985b3ffc 473 Gene3D G3DSA:1.20.1600.10 33 459 1.5E-55 T 19-04-2016 ALIDE2_RS12440 a4e51aabf55b3cab5ff50849985b3ffc 473 SUPERFAMILY SSF56954 19 459 8.89E-68 T 19-04-2016 ALIDE2_RS12440 a4e51aabf55b3cab5ff50849985b3ffc 473 Pfam PF02321 Outer membrane efflux protein 268 455 2.6E-24 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS12440 a4e51aabf55b3cab5ff50849985b3ffc 473 Pfam PF02321 Outer membrane efflux protein 41 243 8.1E-18 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS12440 a4e51aabf55b3cab5ff50849985b3ffc 473 PANTHER PTHR30026:SF3 22 469 5.1E-53 T 19-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 ALIDE2_RS12440 a4e51aabf55b3cab5ff50849985b3ffc 473 PANTHER PTHR30026 22 469 5.1E-53 T 19-04-2016 ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 Pfam PF00271 Helicase conserved C-terminal domain 350 415 7.7E-12 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 SUPERFAMILY SSF52540 257 311 9.82E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 SUPERFAMILY SSF52540 346 426 9.82E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 SUPERFAMILY SSF52540 45 224 9.82E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 PANTHER PTHR24031:SF122 559 621 1.5E-59 T 19-04-2016 ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 PANTHER PTHR24031:SF122 1525 1539 1.5E-59 T 19-04-2016 ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 PANTHER PTHR24031:SF122 286 326 1.5E-59 T 19-04-2016 ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 PANTHER PTHR24031:SF122 34 255 1.5E-59 T 19-04-2016 ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 PANTHER PTHR24031:SF122 350 463 1.5E-59 T 19-04-2016 ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 SMART SM00487 30 253 1.6E-33 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 SMART SM00490 303 415 4.6E-13 T 19-04-2016 IPR001650 Helicase, C-terminal ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 Gene3D G3DSA:3.40.50.300 346 462 1.1E-26 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 Gene3D G3DSA:3.40.50.300 282 311 1.1E-26 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 Pfam PF06224 Winged helix DNA-binding domain 926 1088 5.4E-8 T 19-04-2016 IPR009351 Protein of unknown function DUF1006 ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 Pfam PF00270 DEAD/DEAH box helicase 35 222 6.6E-25 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 PANTHER PTHR24031 559 621 1.5E-59 T 19-04-2016 ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 PANTHER PTHR24031 1525 1539 1.5E-59 T 19-04-2016 ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 PANTHER PTHR24031 286 326 1.5E-59 T 19-04-2016 ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 PANTHER PTHR24031 34 255 1.5E-59 T 19-04-2016 ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 PANTHER PTHR24031 350 463 1.5E-59 T 19-04-2016 ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 Pfam PF08494 DEAD/H associated 678 866 2.1E-71 T 19-04-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 ALIDE2_RS18680 eff60d2be5a1aa3723b64df0b1687c16 1565 Gene3D G3DSA:3.40.50.300 23 238 8.6E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18130 cbf43314cd270bf6ff8cbb8d9c45bd2f 286 Gene3D G3DSA:3.40.50.300 5 218 1.2E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18130 cbf43314cd270bf6ff8cbb8d9c45bd2f 286 SMART SM00382 36 210 9.3E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS18130 cbf43314cd270bf6ff8cbb8d9c45bd2f 286 Pfam PF00005 ABC transporter 27 160 1.5E-24 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS18130 cbf43314cd270bf6ff8cbb8d9c45bd2f 286 PANTHER PTHR24220 13 215 1.7E-73 T 19-04-2016 ALIDE2_RS18130 cbf43314cd270bf6ff8cbb8d9c45bd2f 286 SUPERFAMILY SSF52540 11 213 6.98E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18130 cbf43314cd270bf6ff8cbb8d9c45bd2f 286 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS20690 acb152cacc66e5f0fb804058eac7de30 222 PANTHER PTHR24322:SF57 145 175 1.9E-22 T 19-04-2016 ALIDE2_RS20690 acb152cacc66e5f0fb804058eac7de30 222 PANTHER PTHR24322:SF57 6 126 1.9E-22 T 19-04-2016 ALIDE2_RS20690 acb152cacc66e5f0fb804058eac7de30 222 PANTHER PTHR24322 145 175 1.9E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20690 acb152cacc66e5f0fb804058eac7de30 222 PANTHER PTHR24322 6 126 1.9E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20690 acb152cacc66e5f0fb804058eac7de30 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 2.8E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20690 acb152cacc66e5f0fb804058eac7de30 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 2.8E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20690 acb152cacc66e5f0fb804058eac7de30 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.8E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20690 acb152cacc66e5f0fb804058eac7de30 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 2.8E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20690 acb152cacc66e5f0fb804058eac7de30 222 Pfam PF00106 short chain dehydrogenase 3 181 9.2E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ALIDE2_RS20690 acb152cacc66e5f0fb804058eac7de30 222 Gene3D G3DSA:3.40.50.720 1 217 9.0E-46 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS20690 acb152cacc66e5f0fb804058eac7de30 222 SUPERFAMILY SSF51735 1 217 2.68E-51 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS04575 51d56927763790ade5d0d32972ec1ad3 333 SUPERFAMILY SSF54427 205 331 5.84E-8 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS04575 51d56927763790ade5d0d32972ec1ad3 333 Pfam PF04280 Tim44-like domain 196 330 2.5E-20 T 19-04-2016 IPR007379 Tim44-like domain ALIDE2_RS04575 51d56927763790ade5d0d32972ec1ad3 333 SMART SM00978 195 331 5.7E-41 T 19-04-2016 IPR007379 Tim44-like domain ALIDE2_RS22135 2e283016436ed931d5569423404cbc97 170 Gene3D G3DSA:3.30.160.150 22 169 2.3E-42 T 19-04-2016 ALIDE2_RS22135 2e283016436ed931d5569423404cbc97 170 PANTHER PTHR38098:SF1 3 170 3.0E-15 T 19-04-2016 ALIDE2_RS22135 2e283016436ed931d5569423404cbc97 170 Pfam PF04390 Lipopolysaccharide-assembly 16 164 1.5E-18 T 19-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 ALIDE2_RS22135 2e283016436ed931d5569423404cbc97 170 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 7 169 24.086 T 19-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 ALIDE2_RS22135 2e283016436ed931d5569423404cbc97 170 PANTHER PTHR38098 3 170 3.0E-15 T 19-04-2016 ALIDE2_RS11645 21fd7af7f77c9bfd900cfbffc6a46cc8 501 SUPERFAMILY SSF52540 18 367 4.05E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11645 21fd7af7f77c9bfd900cfbffc6a46cc8 501 PANTHER PTHR30121 21 440 2.3E-164 T 19-04-2016 ALIDE2_RS11645 21fd7af7f77c9bfd900cfbffc6a46cc8 501 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 501 6.9E-233 T 19-04-2016 IPR033186 Helicase HerA-like C-terminal ALIDE2_RS11645 21fd7af7f77c9bfd900cfbffc6a46cc8 501 Gene3D G3DSA:3.40.50.300 204 375 2.1E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11645 21fd7af7f77c9bfd900cfbffc6a46cc8 501 Gene3D G3DSA:3.40.50.300 17 108 2.1E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS11645 21fd7af7f77c9bfd900cfbffc6a46cc8 501 PANTHER PTHR30121:SF3 21 440 2.3E-164 T 19-04-2016 ALIDE2_RS08235 59fd9e49418efdecbeb76eeaf6f1e389 359 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 26 354 8.4E-36 T 19-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX ALIDE2_RS08235 59fd9e49418efdecbeb76eeaf6f1e389 359 PANTHER PTHR38043 1 354 1.2E-19 T 19-04-2016 ALIDE2_RS16750 f940f1e805ad362a5c4309b125991dd4 91 Gene3D G3DSA:3.30.70.100 21 88 6.1E-24 T 19-04-2016 ALIDE2_RS16750 f940f1e805ad362a5c4309b125991dd4 91 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 19-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 ALIDE2_RS16750 f940f1e805ad362a5c4309b125991dd4 91 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 91 7.8E-44 T 19-04-2016 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 ALIDE2_RS16750 f940f1e805ad362a5c4309b125991dd4 91 Pfam PF00403 Heavy-metal-associated domain 26 85 7.2E-18 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS16750 f940f1e805ad362a5c4309b125991dd4 91 PRINTS PR00946 Mercury scavenger protein signature 47 62 4.3E-53 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS16750 f940f1e805ad362a5c4309b125991dd4 91 PRINTS PR00946 Mercury scavenger protein signature 20 31 4.3E-53 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS16750 f940f1e805ad362a5c4309b125991dd4 91 PRINTS PR00946 Mercury scavenger protein signature 31 47 4.3E-53 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS16750 f940f1e805ad362a5c4309b125991dd4 91 PRINTS PR00946 Mercury scavenger protein signature 2 20 4.3E-53 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS16750 f940f1e805ad362a5c4309b125991dd4 91 PRINTS PR00946 Mercury scavenger protein signature 62 76 4.3E-53 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS16750 f940f1e805ad362a5c4309b125991dd4 91 PRINTS PR00946 Mercury scavenger protein signature 76 90 4.3E-53 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ALIDE2_RS16750 f940f1e805ad362a5c4309b125991dd4 91 SUPERFAMILY SSF55008 17 89 1.05E-22 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ALIDE2_RS01685 4dd8911cca7e0cdba7a3e10597b571a5 473 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 19 469 5.6E-126 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 ALIDE2_RS01685 4dd8911cca7e0cdba7a3e10597b571a5 473 PANTHER PTHR30203:SF6 1 470 6.3E-119 T 19-04-2016 ALIDE2_RS01685 4dd8911cca7e0cdba7a3e10597b571a5 473 PANTHER PTHR30203 1 470 6.3E-119 T 19-04-2016 ALIDE2_RS01685 4dd8911cca7e0cdba7a3e10597b571a5 473 Gene3D G3DSA:1.20.1600.10 356 469 8.4E-89 T 19-04-2016 ALIDE2_RS01685 4dd8911cca7e0cdba7a3e10597b571a5 473 Gene3D G3DSA:1.20.1600.10 56 94 8.4E-89 T 19-04-2016 ALIDE2_RS01685 4dd8911cca7e0cdba7a3e10597b571a5 473 Gene3D G3DSA:1.20.1600.10 147 318 8.4E-89 T 19-04-2016 ALIDE2_RS01685 4dd8911cca7e0cdba7a3e10597b571a5 473 Pfam PF02321 Outer membrane efflux protein 68 259 1.9E-25 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS01685 4dd8911cca7e0cdba7a3e10597b571a5 473 Pfam PF02321 Outer membrane efflux protein 291 467 7.7E-21 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS01685 4dd8911cca7e0cdba7a3e10597b571a5 473 Gene3D G3DSA:2.20.200.10 319 354 4.2E-24 T 19-04-2016 ALIDE2_RS01685 4dd8911cca7e0cdba7a3e10597b571a5 473 Gene3D G3DSA:2.20.200.10 105 146 4.2E-24 T 19-04-2016 ALIDE2_RS01685 4dd8911cca7e0cdba7a3e10597b571a5 473 SUPERFAMILY SSF56954 11 470 2.49E-101 T 19-04-2016 ALIDE2_RS00900 4fc8534556cdbbd8d6b482e23feb43b0 273 Gene3D G3DSA:1.10.12.10 209 263 1.3E-9 T 19-04-2016 IPR014748 Crontonase, C-terminal ALIDE2_RS00900 4fc8534556cdbbd8d6b482e23feb43b0 273 SUPERFAMILY SSF52096 4 264 2.42E-64 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS00900 4fc8534556cdbbd8d6b482e23feb43b0 273 Gene3D G3DSA:3.90.226.10 6 206 2.3E-52 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS00900 4fc8534556cdbbd8d6b482e23feb43b0 273 PANTHER PTHR11941 1 262 2.5E-67 T 19-04-2016 ALIDE2_RS00900 4fc8534556cdbbd8d6b482e23feb43b0 273 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 263 1.7E-43 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS00900 4fc8534556cdbbd8d6b482e23feb43b0 273 PANTHER PTHR11941:SF86 1 262 2.5E-67 T 19-04-2016 ALIDE2_RS07680 05abff9402bf442a22cd8b3ce2802cc9 323 PIRSF PIRSF017082 1 322 1.3E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS07680 05abff9402bf442a22cd8b3ce2802cc9 323 PANTHER PTHR30349:SF32 1 284 1.5E-65 T 19-04-2016 ALIDE2_RS07680 05abff9402bf442a22cd8b3ce2802cc9 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 316 1.4E-68 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS07680 05abff9402bf442a22cd8b3ce2802cc9 323 PANTHER PTHR30349 1 284 1.5E-65 T 19-04-2016 ALIDE2_RS07680 05abff9402bf442a22cd8b3ce2802cc9 323 SUPERFAMILY SSF53850 108 288 2.06E-8 T 19-04-2016 ALIDE2_RS17280 04d1ca24938eadcbc9eb358cc6fec5c3 337 PANTHER PTHR36512 12 316 4.0E-99 T 19-04-2016 ALIDE2_RS17280 04d1ca24938eadcbc9eb358cc6fec5c3 337 Pfam PF03576 Peptidase family S58 12 324 1.1E-60 T 19-04-2016 IPR005321 Peptidase S58, DmpA ALIDE2_RS17280 04d1ca24938eadcbc9eb358cc6fec5c3 337 SUPERFAMILY SSF56266 7 320 5.36E-68 T 19-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 ALIDE2_RS17280 04d1ca24938eadcbc9eb358cc6fec5c3 337 Gene3D G3DSA:3.60.70.12 6 327 4.6E-82 T 19-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 ALIDE2_RS17280 04d1ca24938eadcbc9eb358cc6fec5c3 337 PANTHER PTHR36512:SF3 12 316 4.0E-99 T 19-04-2016 ALIDE2_RS08260 d8942fe90c15e1361a4012ac7690536c 109 SUPERFAMILY SSF63592 1 102 1.01E-30 T 19-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 ALIDE2_RS08260 d8942fe90c15e1361a4012ac7690536c 109 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 109 25.688 T 19-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 ALIDE2_RS08260 d8942fe90c15e1361a4012ac7690536c 109 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 10 102 1.0E-30 T 19-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 ALIDE2_RS08260 d8942fe90c15e1361a4012ac7690536c 109 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 106 7.0E-40 T 19-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 ALIDE2_RS12710 2609ba66f5ca1bfd32d83bf645dc7e10 135 Gene3D G3DSA:1.10.286.20 1 43 2.0E-19 T 19-04-2016 ALIDE2_RS12710 2609ba66f5ca1bfd32d83bf645dc7e10 135 PANTHER PTHR30437:SF5 1 133 1.2E-51 T 19-04-2016 ALIDE2_RS12710 2609ba66f5ca1bfd32d83bf645dc7e10 135 SUPERFAMILY SSF54534 49 125 2.88E-18 T 19-04-2016 ALIDE2_RS12710 2609ba66f5ca1bfd32d83bf645dc7e10 135 Pfam PF14760 Rnk N-terminus 5 43 6.7E-13 T 19-04-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain ALIDE2_RS12710 2609ba66f5ca1bfd32d83bf645dc7e10 135 PANTHER PTHR30437 1 133 1.2E-51 T 19-04-2016 ALIDE2_RS12710 2609ba66f5ca1bfd32d83bf645dc7e10 135 Gene3D G3DSA:3.10.50.30 45 135 1.1E-27 T 19-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ALIDE2_RS12710 2609ba66f5ca1bfd32d83bf645dc7e10 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 4.2E-19 T 19-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ALIDE2_RS20895 4a706face9d46b6ada5abe644e633f90 286 PANTHER PTHR30433:SF4 1 286 8.7E-140 T 19-04-2016 IPR022522 Flagellar motor stator, MotA ALIDE2_RS20895 4a706face9d46b6ada5abe644e633f90 286 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 207 224 - T 19-04-2016 IPR000540 Flagellar motor protein MotA, conserved site ALIDE2_RS20895 4a706face9d46b6ada5abe644e633f90 286 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 283 4.5E-116 T 19-04-2016 IPR022522 Flagellar motor stator, MotA ALIDE2_RS20895 4a706face9d46b6ada5abe644e633f90 286 Pfam PF01618 MotA/TolQ/ExbB proton channel family 140 236 8.9E-11 T 19-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 ALIDE2_RS20895 4a706face9d46b6ada5abe644e633f90 286 PANTHER PTHR30433 1 286 8.7E-140 T 19-04-2016 ALIDE2_RS05870 8b8b048e8142c593cb69e25e1ee54758 87 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 42 6.8E-13 T 19-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM ALIDE2_RS05870 8b8b048e8142c593cb69e25e1ee54758 87 SUPERFAMILY SSF143120 4 42 3.53E-10 T 19-04-2016 ALIDE2_RS05870 8b8b048e8142c593cb69e25e1ee54758 87 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 42 2.5E-13 T 19-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM ALIDE2_RS05870 8b8b048e8142c593cb69e25e1ee54758 87 Gene3D G3DSA:3.40.1620.10 3 43 1.1E-19 T 19-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM ALIDE2_RS00960 c5ed6edd7c6942b470fd78e23a0e1be8 298 Gene3D G3DSA:2.120.10.30 205 276 2.5E-7 T 19-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like ALIDE2_RS00960 c5ed6edd7c6942b470fd78e23a0e1be8 298 Gene3D G3DSA:2.120.10.30 63 103 2.5E-7 T 19-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like ALIDE2_RS00960 c5ed6edd7c6942b470fd78e23a0e1be8 298 Pfam PF06977 SdiA-regulated 43 284 1.5E-70 T 19-04-2016 IPR009722 SdiA-regulated ALIDE2_RS00960 c5ed6edd7c6942b470fd78e23a0e1be8 298 SUPERFAMILY SSF50956 45 286 3.4E-30 T 19-04-2016 ALIDE2_RS14055 603bb73d382692026ad8407887edae00 174 ProSitePatterns PS00938 Initiation factor 3 signature. 47 60 - T 19-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 ALIDE2_RS14055 603bb73d382692026ad8407887edae00 174 Gene3D G3DSA:3.30.110.10 68 160 1.5E-39 T 19-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 ALIDE2_RS14055 603bb73d382692026ad8407887edae00 174 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 159 26.938 T 19-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 ALIDE2_RS14055 603bb73d382692026ad8407887edae00 174 SUPERFAMILY SSF55200 71 160 3.27E-33 T 19-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 ALIDE2_RS14055 603bb73d382692026ad8407887edae00 174 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 65 1.8E-24 T 19-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 ALIDE2_RS14055 603bb73d382692026ad8407887edae00 174 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 72 156 9.5E-38 T 19-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 ALIDE2_RS14055 603bb73d382692026ad8407887edae00 174 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 159 2.0E-62 T 19-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 ALIDE2_RS14055 603bb73d382692026ad8407887edae00 174 SUPERFAMILY SSF54364 2 66 1.57E-23 T 19-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 ALIDE2_RS14055 603bb73d382692026ad8407887edae00 174 PANTHER PTHR10938 1 171 9.0E-62 T 19-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 ALIDE2_RS14055 603bb73d382692026ad8407887edae00 174 Gene3D G3DSA:3.10.20.80 2 67 7.6E-29 T 19-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 ALIDE2_RS21810 750c0ec078323a971fa0eb7a47f0eee4 135 Gene3D G3DSA:2.60.40.1470 6 119 1.9E-44 T 19-04-2016 IPR007474 ApaG domain ALIDE2_RS21810 750c0ec078323a971fa0eb7a47f0eee4 135 PANTHER PTHR14289 9 118 2.6E-46 T 19-04-2016 ALIDE2_RS21810 750c0ec078323a971fa0eb7a47f0eee4 135 SUPERFAMILY SSF110069 5 118 9.81E-46 T 19-04-2016 IPR007474 ApaG domain ALIDE2_RS21810 750c0ec078323a971fa0eb7a47f0eee4 135 Hamap MF_00791 Protein ApaG [apaG]. 1 135 29.893 T 19-04-2016 IPR023065 Uncharacterised protein family ApaG ALIDE2_RS21810 750c0ec078323a971fa0eb7a47f0eee4 135 Pfam PF04379 Protein of unknown function (DUF525) 16 101 9.1E-36 T 19-04-2016 IPR007474 ApaG domain ALIDE2_RS20255 f3ca0059e65fe35d35946ceb1ed5a048 231 PANTHER PTHR38765 1 230 2.2E-21 T 19-04-2016 ALIDE2_RS20255 f3ca0059e65fe35d35946ceb1ed5a048 231 Pfam PF04340 Protein of unknown function, DUF484 11 229 3.6E-29 T 19-04-2016 IPR007435 Protein of unknown function DUF484 ALIDE2_RS22895 14eb3f93161fe4017f56cec039668f03 184 PIRSF PIRSF028688 1 182 1.1E-12 T 19-04-2016 IPR014549 Flagellar protein FlgO ALIDE2_RS14145 f9350f831ff638917d301dd0128f3121 197 PANTHER PTHR33567 12 197 1.7E-23 T 19-04-2016 ALIDE2_RS14145 f9350f831ff638917d301dd0128f3121 197 Pfam PF02417 Chromate transporter 13 192 1.5E-33 T 19-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 ALIDE2_RS06515 0f673bee73ebe1deda956f64eb617326 216 SUPERFAMILY SSF52016 1 201 9.61E-64 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS06515 0f673bee73ebe1deda956f64eb617326 216 Pfam PF00694 Aconitase C-terminal domain 1 132 6.2E-39 T 19-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06515 0f673bee73ebe1deda956f64eb617326 216 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 44.169 T 19-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06515 0f673bee73ebe1deda956f64eb617326 216 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 8.6E-82 T 19-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS06515 0f673bee73ebe1deda956f64eb617326 216 Gene3D G3DSA:3.20.19.10 1 204 6.4E-55 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS06515 0f673bee73ebe1deda956f64eb617326 216 PANTHER PTHR11670:SF27 1 208 1.8E-105 T 19-04-2016 ALIDE2_RS06515 0f673bee73ebe1deda956f64eb617326 216 PANTHER PTHR11670 1 208 1.8E-105 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS14760 2a15f7e113ec90af653ea777ea372953 93 SUPERFAMILY SSF46955 21 78 3.84E-9 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS14760 2a15f7e113ec90af653ea777ea372953 93 Gene3D G3DSA:1.10.10.10 21 76 1.6E-6 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS14760 2a15f7e113ec90af653ea777ea372953 93 Pfam PF12728 Helix-turn-helix domain 22 72 1.4E-9 T 19-04-2016 ALIDE2_RS00680 a8e2cb1decd32e1371348509e8965bd3 259 PANTHER PTHR30136:SF4 6 259 5.1E-55 T 19-04-2016 ALIDE2_RS00680 a8e2cb1decd32e1371348509e8965bd3 259 SUPERFAMILY SSF46785 10 83 2.65E-12 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00680 a8e2cb1decd32e1371348509e8965bd3 259 SUPERFAMILY SSF55781 87 254 5.95E-26 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00680 a8e2cb1decd32e1371348509e8965bd3 259 Gene3D G3DSA:3.30.450.40 81 255 7.2E-28 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS00680 a8e2cb1decd32e1371348509e8965bd3 259 Gene3D G3DSA:1.10.10.10 4 70 2.8E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00680 a8e2cb1decd32e1371348509e8965bd3 259 SMART SM00346 10 100 6.2E-18 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS00680 a8e2cb1decd32e1371348509e8965bd3 259 PANTHER PTHR30136 6 259 5.1E-55 T 19-04-2016 ALIDE2_RS00680 a8e2cb1decd32e1371348509e8965bd3 259 Pfam PF01614 Bacterial transcriptional regulator 132 232 1.4E-5 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS00680 a8e2cb1decd32e1371348509e8965bd3 259 Pfam PF09339 IclR helix-turn-helix domain 12 61 2.3E-14 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS15085 9a80655f31fd1c9e333469154940bccd 352 PANTHER PTHR30325 13 351 9.3E-154 T 19-04-2016 ALIDE2_RS15085 9a80655f31fd1c9e333469154940bccd 352 SUPERFAMILY SSF161098 148 334 4.45E-21 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS15085 9a80655f31fd1c9e333469154940bccd 352 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 57 3.9E-8 T 19-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ALIDE2_RS15085 9a80655f31fd1c9e333469154940bccd 352 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 167 351 5.6E-30 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS15085 9a80655f31fd1c9e333469154940bccd 352 Gene3D G3DSA:1.10.3720.10 146 349 2.5E-22 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS22380 d1efcca34a81efa9e13ddbab83cf987b 114 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 8 94 8.2E-7 T 19-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 ALIDE2_RS22380 d1efcca34a81efa9e13ddbab83cf987b 114 Gene3D G3DSA:3.30.160.100 1 95 4.1E-6 T 19-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 ALIDE2_RS22380 d1efcca34a81efa9e13ddbab83cf987b 114 SUPERFAMILY SSF69754 1 94 2.35E-7 T 19-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 ALIDE2_RS20190 f693847b504af41ac8fa8a15dc4f2686 356 PANTHER PTHR13748:SF43 236 356 2.5E-125 T 19-04-2016 ALIDE2_RS20190 f693847b504af41ac8fa8a15dc4f2686 356 PANTHER PTHR13748:SF43 4 212 2.5E-125 T 19-04-2016 ALIDE2_RS20190 f693847b504af41ac8fa8a15dc4f2686 356 SUPERFAMILY SSF52540 5 205 7.47E-39 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS20190 f693847b504af41ac8fa8a15dc4f2686 356 Gene3D G3DSA:3.30.1220.10 239 354 3.3E-39 T 19-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ALIDE2_RS20190 f693847b504af41ac8fa8a15dc4f2686 356 PANTHER PTHR13748 236 356 2.5E-125 T 19-04-2016 ALIDE2_RS20190 f693847b504af41ac8fa8a15dc4f2686 356 PANTHER PTHR13748 4 212 2.5E-125 T 19-04-2016 ALIDE2_RS20190 f693847b504af41ac8fa8a15dc4f2686 356 SUPERFAMILY SSF90002 260 354 3.53E-26 T 19-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ALIDE2_RS20190 f693847b504af41ac8fa8a15dc4f2686 356 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 260 354 3.5E-23 T 19-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ALIDE2_RS20190 f693847b504af41ac8fa8a15dc4f2686 356 SMART SM00833 260 354 5.6E-18 T 19-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ALIDE2_RS20190 f693847b504af41ac8fa8a15dc4f2686 356 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 185 1.1E-54 T 19-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain ALIDE2_RS20190 f693847b504af41ac8fa8a15dc4f2686 356 Gene3D G3DSA:3.40.50.300 4 205 6.2E-74 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15090 23a735eeff7ebe5bea7aa870ab5df70a 345 PANTHER PTHR30465:SF66 1 344 8.2E-173 T 19-04-2016 ALIDE2_RS15090 23a735eeff7ebe5bea7aa870ab5df70a 345 Gene3D G3DSA:1.10.3720.10 111 334 2.4E-17 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS15090 23a735eeff7ebe5bea7aa870ab5df70a 345 SUPERFAMILY SSF161098 115 326 7.98E-18 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS15090 23a735eeff7ebe5bea7aa870ab5df70a 345 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 136 343 1.3E-35 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS15090 23a735eeff7ebe5bea7aa870ab5df70a 345 PANTHER PTHR30465 1 344 8.2E-173 T 19-04-2016 ALIDE2_RS17585 ea97bf940fc7af767eb84c858d181a0e 99 SMART SM00899 14 92 1.1E-15 T 19-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 ALIDE2_RS17585 ea97bf940fc7af767eb84c858d181a0e 99 Pfam PF04023 FeoA domain 16 91 1.3E-16 T 19-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 ALIDE2_RS17585 ea97bf940fc7af767eb84c858d181a0e 99 SUPERFAMILY SSF50037 16 91 5.26E-12 T 19-04-2016 IPR008988 Transcriptional repressor, C-terminal ALIDE2_RS08960 0bbc8e427824b5ff250c606b73323314 121 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 34 108 9.0E-30 T 19-04-2016 IPR019110 Uncharacterised protein family, RAQPRD ALIDE2_RS08960 0bbc8e427824b5ff250c606b73323314 121 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 16 110 2.5E-35 T 19-04-2016 IPR019110 Uncharacterised protein family, RAQPRD ALIDE2_RS02130 9b711c8313a42dd936842a5391185754 320 Pfam PF05065 Phage capsid family 42 307 2.7E-15 T 19-04-2016 IPR024455 Phage capsid ALIDE2_RS02130 9b711c8313a42dd936842a5391185754 320 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 42 255 1.7E-8 T 19-04-2016 IPR006444 Phage major capsid protein, HK97 ALIDE2_RS02130 9b711c8313a42dd936842a5391185754 320 SUPERFAMILY SSF56563 37 310 3.14E-17 T 19-04-2016 ALIDE2_RS09490 dd1fd2453c5dc8234e8dbbe8972989f6 275 Pfam PF06067 Domain of unknown function (DUF932) 37 264 1.9E-60 T 19-04-2016 IPR026325 Protein of unknown function DUF932 ALIDE2_RS05285 218300123450757aa00b141cec355048 843 PANTHER PTHR30287 7 842 1.1E-119 T 19-04-2016 ALIDE2_RS05285 218300123450757aa00b141cec355048 843 Pfam PF02687 FtsX-like permease family 719 831 2.3E-11 T 19-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 ALIDE2_RS05285 218300123450757aa00b141cec355048 843 Pfam PF02687 FtsX-like permease family 272 384 4.8E-8 T 19-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 ALIDE2_RS13460 bf18b8c22dad1efaf0dccf2e64532a7b 115 Pfam PF11604 Copper binding periplasmic protein CusF 47 113 2.8E-27 T 19-04-2016 IPR021647 Copper binding periplasmic protein CusF ALIDE2_RS09295 ba4da2b0cc0b0d0d5c18ec8ef40d4894 484 PANTHER PTHR16943:SF8 1 478 5.8E-37 T 19-04-2016 ALIDE2_RS09295 ba4da2b0cc0b0d0d5c18ec8ef40d4894 484 SUPERFAMILY SSF103378 3 461 9.68E-93 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS09295 ba4da2b0cc0b0d0d5c18ec8ef40d4894 484 PANTHER PTHR16943 1 478 5.8E-37 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS09295 ba4da2b0cc0b0d0d5c18ec8ef40d4894 484 Gene3D G3DSA:3.30.1330.120 276 404 1.4E-8 T 19-04-2016 ALIDE2_RS09295 ba4da2b0cc0b0d0d5c18ec8ef40d4894 484 Pfam PF03972 MmgE/PrpD family 6 452 4.9E-87 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS17885 d017322256e6c7d58edc2d174bee1d9c 309 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 17 33 - T 19-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 ALIDE2_RS17885 d017322256e6c7d58edc2d174bee1d9c 309 Gene3D G3DSA:3.20.20.70 9 288 2.1E-61 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS17885 d017322256e6c7d58edc2d174bee1d9c 309 PANTHER PTHR10277:SF44 9 290 1.2E-99 T 19-04-2016 ALIDE2_RS17885 d017322256e6c7d58edc2d174bee1d9c 309 Pfam PF00682 HMGL-like 14 283 9.3E-43 T 19-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 ALIDE2_RS17885 d017322256e6c7d58edc2d174bee1d9c 309 PANTHER PTHR10277 9 290 1.2E-99 T 19-04-2016 ALIDE2_RS17885 d017322256e6c7d58edc2d174bee1d9c 309 SUPERFAMILY SSF51569 7 289 9.71E-65 T 19-04-2016 ALIDE2_RS09020 06adc61349be9ca0b46c2ca3525d6584 987 Pfam PF02384 N-6 DNA Methylase 282 568 1.2E-13 T 19-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 ALIDE2_RS09020 06adc61349be9ca0b46c2ca3525d6584 987 SUPERFAMILY SSF53335 162 568 4.4E-35 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS09020 06adc61349be9ca0b46c2ca3525d6584 987 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 333 347 5.8E-7 T 19-04-2016 ALIDE2_RS09020 06adc61349be9ca0b46c2ca3525d6584 987 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 307 323 5.8E-7 T 19-04-2016 ALIDE2_RS09020 06adc61349be9ca0b46c2ca3525d6584 987 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 445 457 5.8E-7 T 19-04-2016 ALIDE2_RS09020 06adc61349be9ca0b46c2ca3525d6584 987 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 448 454 - T 19-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ALIDE2_RS09020 06adc61349be9ca0b46c2ca3525d6584 987 Gene3D G3DSA:3.40.50.150 309 566 2.4E-21 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS14370 6a6b70c72706e0c76a3bcf2dc4eaec9d 233 Gene3D G3DSA:2.60.120.10 3 233 2.7E-71 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS14370 6a6b70c72706e0c76a3bcf2dc4eaec9d 233 PANTHER PTHR13903 1 233 4.3E-104 T 19-04-2016 IPR012093 Pirin ALIDE2_RS14370 6a6b70c72706e0c76a3bcf2dc4eaec9d 233 SUPERFAMILY SSF51182 1 233 2.12E-75 T 19-04-2016 IPR011051 RmlC-like cupin domain ALIDE2_RS14370 6a6b70c72706e0c76a3bcf2dc4eaec9d 233 Pfam PF02678 Pirin 7 119 2.1E-35 T 19-04-2016 IPR003829 Pirin, N-terminal domain ALIDE2_RS14370 6a6b70c72706e0c76a3bcf2dc4eaec9d 233 PIRSF PIRSF006232 1 233 4.4E-53 T 19-04-2016 IPR012093 Pirin ALIDE2_RS14370 6a6b70c72706e0c76a3bcf2dc4eaec9d 233 PANTHER PTHR13903:SF7 1 233 4.3E-104 T 19-04-2016 ALIDE2_RS21715 57e37708362ff8181e01a7e98cf7c66c 535 PANTHER PTHR11686 9 535 4.1E-229 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS21715 57e37708362ff8181e01a7e98cf7c66c 535 Pfam PF01019 Gamma-glutamyltranspeptidase 40 530 3.2E-155 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS21715 57e37708362ff8181e01a7e98cf7c66c 535 SUPERFAMILY SSF56235 12 535 1.4E-168 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ALIDE2_RS21715 57e37708362ff8181e01a7e98cf7c66c 535 PANTHER PTHR11686:SF8 9 535 4.1E-229 T 19-04-2016 ALIDE2_RS21715 57e37708362ff8181e01a7e98cf7c66c 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 377 395 1.7E-34 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS21715 57e37708362ff8181e01a7e98cf7c66c 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 132 151 1.7E-34 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS21715 57e37708362ff8181e01a7e98cf7c66c 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 408 423 1.7E-34 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS21715 57e37708362ff8181e01a7e98cf7c66c 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 230 246 1.7E-34 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS21715 57e37708362ff8181e01a7e98cf7c66c 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 353 371 1.7E-34 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS21715 57e37708362ff8181e01a7e98cf7c66c 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 114 132 1.7E-34 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS21715 57e37708362ff8181e01a7e98cf7c66c 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 47 72 1.7E-34 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS21715 57e37708362ff8181e01a7e98cf7c66c 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 259 278 1.7E-34 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ALIDE2_RS17965 56e184ad7e5041acb94a988f794716ab 282 PANTHER PTHR32125 17 261 3.1E-50 T 19-04-2016 ALIDE2_RS17965 56e184ad7e5041acb94a988f794716ab 282 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 20 247 5.2E-50 T 19-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17965 56e184ad7e5041acb94a988f794716ab 282 SUPERFAMILY SSF53448 18 246 6.76E-48 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS17965 56e184ad7e5041acb94a988f794716ab 282 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 122 129 - T 19-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17965 56e184ad7e5041acb94a988f794716ab 282 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 17 249 27.652 T 19-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17965 56e184ad7e5041acb94a988f794716ab 282 Gene3D G3DSA:3.90.550.10 18 248 2.1E-57 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS17965 56e184ad7e5041acb94a988f794716ab 282 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 19 246 9.0E-56 T 19-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 ALIDE2_RS17965 56e184ad7e5041acb94a988f794716ab 282 PANTHER PTHR32125:SF4 17 261 3.1E-50 T 19-04-2016 ALIDE2_RS14565 ec54d519054317eb8a068f39e1f507bc 179 Pfam PF01327 Polypeptide deformylase 4 159 1.3E-44 T 19-04-2016 IPR023635 Peptide deformylase ALIDE2_RS14565 ec54d519054317eb8a068f39e1f507bc 179 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 160 2.3E-33 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS14565 ec54d519054317eb8a068f39e1f507bc 179 PRINTS PR01576 Peptide deformylase signature 130 159 4.4E-28 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS14565 ec54d519054317eb8a068f39e1f507bc 179 PRINTS PR01576 Peptide deformylase signature 111 129 4.4E-28 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS14565 ec54d519054317eb8a068f39e1f507bc 179 PRINTS PR01576 Peptide deformylase signature 99 110 4.4E-28 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS14565 ec54d519054317eb8a068f39e1f507bc 179 PRINTS PR01576 Peptide deformylase signature 34 63 4.4E-28 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS14565 ec54d519054317eb8a068f39e1f507bc 179 PANTHER PTHR10458:SF4 1 167 8.7E-69 T 19-04-2016 ALIDE2_RS14565 ec54d519054317eb8a068f39e1f507bc 179 PANTHER PTHR10458 1 167 8.7E-69 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS14565 ec54d519054317eb8a068f39e1f507bc 179 PIRSF PIRSF004749 1 172 1.4E-47 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS14565 ec54d519054317eb8a068f39e1f507bc 179 Gene3D G3DSA:3.90.45.10 5 167 8.5E-53 T 19-04-2016 IPR023635 Peptide deformylase ALIDE2_RS14565 ec54d519054317eb8a068f39e1f507bc 179 SUPERFAMILY SSF56420 1 167 6.8E-57 T 19-04-2016 IPR023635 Peptide deformylase ALIDE2_RS14565 ec54d519054317eb8a068f39e1f507bc 179 Hamap MF_00163 Peptide deformylase [def]. 2 172 25.725 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 ALIDE2_RS09590 a68ea3737d394af8513e18e7b2929ca4 960 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 54 950 0.0 T 19-04-2016 IPR022303 Conjugative transfer ATPase ALIDE2_RS09590 a68ea3737d394af8513e18e7b2929ca4 960 SUPERFAMILY SSF52540 482 610 3.6E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09590 a68ea3737d394af8513e18e7b2929ca4 960 SUPERFAMILY SSF52540 646 878 3.6E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09590 a68ea3737d394af8513e18e7b2929ca4 960 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 65 338 6.6E-72 T 19-04-2016 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase ALIDE2_RS09590 a68ea3737d394af8513e18e7b2929ca4 960 Gene3D G3DSA:3.40.50.300 726 864 3.1E-13 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09590 a68ea3737d394af8513e18e7b2929ca4 960 Gene3D G3DSA:3.40.50.300 528 601 3.1E-13 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00560 2421f8f20d6cb04b876daeab8bf37ca2 127 SUPERFAMILY SSF51182 7 116 1.5E-25 T 19-04-2016 IPR011051 RmlC-like cupin domain ALIDE2_RS00560 2421f8f20d6cb04b876daeab8bf37ca2 127 Pfam PF07883 Cupin domain 45 113 7.9E-16 T 19-04-2016 IPR013096 Cupin 2, conserved barrel ALIDE2_RS00560 2421f8f20d6cb04b876daeab8bf37ca2 127 Gene3D G3DSA:2.60.120.10 21 120 3.8E-23 T 19-04-2016 IPR014710 RmlC-like jelly roll fold ALIDE2_RS08640 ccc3102efb031eab92c07b33c599b842 372 PANTHER PTHR30294:SF15 4 359 1.1E-84 T 19-04-2016 ALIDE2_RS08640 ccc3102efb031eab92c07b33c599b842 372 PANTHER PTHR30294 4 359 1.1E-84 T 19-04-2016 ALIDE2_RS08640 ccc3102efb031eab92c07b33c599b842 372 Pfam PF12698 ABC-2 family transporter protein 32 363 3.5E-37 T 19-04-2016 ALIDE2_RS16710 01ecf10017dbc6d22d323b4ac168ecd3 165 PANTHER PTHR30373 12 165 1.4E-57 T 19-04-2016 ALIDE2_RS16710 01ecf10017dbc6d22d323b4ac168ecd3 165 PANTHER PTHR30373:SF3 12 165 1.4E-57 T 19-04-2016 ALIDE2_RS16710 01ecf10017dbc6d22d323b4ac168ecd3 165 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 21 141 3.6E-13 T 19-04-2016 IPR007621 TPM domain ALIDE2_RS16825 aada1ec6ce289946a3e33ccd2d86c36b 118 SUPERFAMILY SSF75169 1 118 1.96E-26 T 19-04-2016 IPR027396 DsrEFH-like ALIDE2_RS16825 aada1ec6ce289946a3e33ccd2d86c36b 118 Pfam PF02635 DsrE/DsrF-like family 1 118 2.9E-20 T 19-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein ALIDE2_RS16825 aada1ec6ce289946a3e33ccd2d86c36b 118 Gene3D G3DSA:3.40.1260.10 1 118 7.4E-36 T 19-04-2016 IPR027396 DsrEFH-like ALIDE2_RS16825 aada1ec6ce289946a3e33ccd2d86c36b 118 PANTHER PTHR34874 1 118 1.2E-23 T 19-04-2016 ALIDE2_RS09940 6f6073004dfefdf949e53386ce41d11a 159 SUPERFAMILY SSF109709 75 129 4.58E-9 T 19-04-2016 ALIDE2_RS02600 83b12b9c8485f46a61e9d6bc1feccdc5 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 322 2.9E-81 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS02600 83b12b9c8485f46a61e9d6bc1feccdc5 326 SUPERFAMILY SSF53850 113 282 2.17E-13 T 19-04-2016 ALIDE2_RS02600 83b12b9c8485f46a61e9d6bc1feccdc5 326 PIRSF PIRSF017082 1 326 5.5E-77 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS02600 83b12b9c8485f46a61e9d6bc1feccdc5 326 PANTHER PTHR30349 18 287 9.8E-107 T 19-04-2016 ALIDE2_RS02600 83b12b9c8485f46a61e9d6bc1feccdc5 326 PANTHER PTHR30349:SF30 18 287 9.8E-107 T 19-04-2016 ALIDE2_RS02840 9da45733b58559605193fed31cc20797 106 Pfam PF14330 Domain of unknown function (DUF4387) 6 102 4.3E-34 T 19-04-2016 IPR025496 Protein of unknown function DUF4387 ALIDE2_RS17110 9cd89c370073f3c018bf7d4cc992935d 183 Pfam PF16793 RepB DNA-primase from phage plasmid 55 175 2.4E-14 T 19-04-2016 ALIDE2_RS17465 addc6194d6cbbd65fd032bf9cd22a5cf 521 PANTHER PTHR11206:SF90 70 85 7.3E-65 T 19-04-2016 ALIDE2_RS17465 addc6194d6cbbd65fd032bf9cd22a5cf 521 PIRSF PIRSF002869 1 521 6.1E-141 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ALIDE2_RS17465 addc6194d6cbbd65fd032bf9cd22a5cf 521 PANTHER PTHR11206:SF90 232 453 7.3E-65 T 19-04-2016 ALIDE2_RS17465 addc6194d6cbbd65fd032bf9cd22a5cf 521 PRINTS PR01806 Virulence factor MviN signature 33 52 5.3E-72 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ALIDE2_RS17465 addc6194d6cbbd65fd032bf9cd22a5cf 521 PRINTS PR01806 Virulence factor MviN signature 133 157 5.3E-72 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ALIDE2_RS17465 addc6194d6cbbd65fd032bf9cd22a5cf 521 PRINTS PR01806 Virulence factor MviN signature 157 178 5.3E-72 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ALIDE2_RS17465 addc6194d6cbbd65fd032bf9cd22a5cf 521 PRINTS PR01806 Virulence factor MviN signature 270 296 5.3E-72 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ALIDE2_RS17465 addc6194d6cbbd65fd032bf9cd22a5cf 521 PRINTS PR01806 Virulence factor MviN signature 52 68 5.3E-72 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ALIDE2_RS17465 addc6194d6cbbd65fd032bf9cd22a5cf 521 PRINTS PR01806 Virulence factor MviN signature 420 437 5.3E-72 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ALIDE2_RS17465 addc6194d6cbbd65fd032bf9cd22a5cf 521 PRINTS PR01806 Virulence factor MviN signature 368 387 5.3E-72 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ALIDE2_RS17465 addc6194d6cbbd65fd032bf9cd22a5cf 521 PANTHER PTHR11206 232 453 7.3E-65 T 19-04-2016 ALIDE2_RS17465 addc6194d6cbbd65fd032bf9cd22a5cf 521 PANTHER PTHR11206 70 85 7.3E-65 T 19-04-2016 ALIDE2_RS17465 addc6194d6cbbd65fd032bf9cd22a5cf 521 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 509 1.1E-127 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ALIDE2_RS17465 addc6194d6cbbd65fd032bf9cd22a5cf 521 Pfam PF03023 MviN-like protein 28 478 5.7E-123 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ALIDE2_RS16600 0eb91c78d1d0347a2545a6440ac1fcd9 860 SUPERFAMILY SSF52540 435 773 3.88E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16600 0eb91c78d1d0347a2545a6440ac1fcd9 860 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 31 286 9.2E-60 T 19-04-2016 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase ALIDE2_RS16600 0eb91c78d1d0347a2545a6440ac1fcd9 860 Gene3D G3DSA:3.40.50.300 645 768 3.6E-16 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16600 0eb91c78d1d0347a2545a6440ac1fcd9 860 Gene3D G3DSA:3.40.50.300 480 558 3.6E-16 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16600 0eb91c78d1d0347a2545a6440ac1fcd9 860 PANTHER PTHR38467 220 856 5.7E-13 T 19-04-2016 ALIDE2_RS16600 0eb91c78d1d0347a2545a6440ac1fcd9 860 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 35 855 8.9E-283 T 19-04-2016 IPR014117 Type-IV secretion system protein TraC ALIDE2_RS08785 a4590a9b14e89cde580d3d53325a160d 369 SUPERFAMILY SSF53335 18 179 2.67E-24 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS08785 a4590a9b14e89cde580d3d53325a160d 369 Gene3D G3DSA:3.40.50.150 21 196 1.6E-21 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS08785 a4590a9b14e89cde580d3d53325a160d 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 101 113 5.8E-8 T 19-04-2016 ALIDE2_RS08785 a4590a9b14e89cde580d3d53325a160d 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 41 55 5.8E-8 T 19-04-2016 ALIDE2_RS08785 a4590a9b14e89cde580d3d53325a160d 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 154 5.8E-8 T 19-04-2016 ALIDE2_RS08785 a4590a9b14e89cde580d3d53325a160d 369 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 104 110 - T 19-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ALIDE2_RS21135 6a2be456d4ef9835355201b1e2a14267 259 Gene3D G3DSA:1.10.12.10 201 258 6.7E-18 T 19-04-2016 IPR014748 Crontonase, C-terminal ALIDE2_RS21135 6a2be456d4ef9835355201b1e2a14267 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 19-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ALIDE2_RS21135 6a2be456d4ef9835355201b1e2a14267 259 SUPERFAMILY SSF52096 2 258 8.79E-78 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS21135 6a2be456d4ef9835355201b1e2a14267 259 Gene3D G3DSA:3.90.226.10 8 200 1.6E-56 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS21135 6a2be456d4ef9835355201b1e2a14267 259 PANTHER PTHR11941 9 256 3.5E-77 T 19-04-2016 ALIDE2_RS21135 6a2be456d4ef9835355201b1e2a14267 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 258 3.2E-55 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS07395 c8e53a6f694bf359ab0e00b675dd05f3 291 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 280 1.3E-38 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS07395 c8e53a6f694bf359ab0e00b675dd05f3 291 PANTHER PTHR11795 1 286 5.5E-54 T 19-04-2016 ALIDE2_RS22145 f7ce321c46fe11e74039cb8535361532 414 Gene3D G3DSA:2.30.30.60 199 249 1.6E-8 T 19-04-2016 ALIDE2_RS22145 f7ce321c46fe11e74039cb8535361532 414 PANTHER PTHR30414:SF0 12 413 1.3E-170 T 19-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 ALIDE2_RS22145 f7ce321c46fe11e74039cb8535361532 414 Pfam PF00924 Mechanosensitive ion channel 145 394 1.2E-44 T 19-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ALIDE2_RS22145 f7ce321c46fe11e74039cb8535361532 414 PANTHER PTHR30414 12 413 1.3E-170 T 19-04-2016 ALIDE2_RS22145 f7ce321c46fe11e74039cb8535361532 414 SUPERFAMILY SSF50182 182 249 1.67E-11 T 19-04-2016 IPR010920 LSM domain ALIDE2_RS04245 591a0d4171308c8b3d4df44813e0630c 159 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.3E-12 T 19-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 ALIDE2_RS04245 591a0d4171308c8b3d4df44813e0630c 159 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.3E-12 T 19-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 ALIDE2_RS04245 591a0d4171308c8b3d4df44813e0630c 159 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.3E-12 T 19-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 ALIDE2_RS04245 591a0d4171308c8b3d4df44813e0630c 159 PANTHER PTHR33162 1 69 6.5E-15 T 19-04-2016 ALIDE2_RS04245 591a0d4171308c8b3d4df44813e0630c 159 PANTHER PTHR33162:SF4 1 69 6.5E-15 T 19-04-2016 ALIDE2_RS04245 591a0d4171308c8b3d4df44813e0630c 159 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 74 2.7E-17 T 19-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 ALIDE2_RS04245 591a0d4171308c8b3d4df44813e0630c 159 Pfam PF02416 mttA/Hcf106 family 4 45 3.3E-7 T 19-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ALIDE2_RS04245 591a0d4171308c8b3d4df44813e0630c 159 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 159 14.88 T 19-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 ALIDE2_RS21040 c0935a39d7829d37fee73cd8b7a3be7f 291 SUPERFAMILY SSF54506 4 290 7.85E-68 T 19-04-2016 ALIDE2_RS21040 c0935a39d7829d37fee73cd8b7a3be7f 291 PANTHER PTHR13774:SF18 1 291 4.4E-96 T 19-04-2016 ALIDE2_RS21040 c0935a39d7829d37fee73cd8b7a3be7f 291 Gene3D G3DSA:3.10.310.10 2 127 2.1E-38 T 19-04-2016 ALIDE2_RS21040 c0935a39d7829d37fee73cd8b7a3be7f 291 PIRSF PIRSF016184 1 291 1.6E-63 T 19-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- ALIDE2_RS21040 c0935a39d7829d37fee73cd8b7a3be7f 291 Pfam PF02567 Phenazine biosynthesis-like protein 9 287 8.1E-50 T 19-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- ALIDE2_RS21040 c0935a39d7829d37fee73cd8b7a3be7f 291 Gene3D G3DSA:3.10.310.10 130 280 6.1E-40 T 19-04-2016 ALIDE2_RS21040 c0935a39d7829d37fee73cd8b7a3be7f 291 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 290 3.4E-52 T 19-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- ALIDE2_RS21040 c0935a39d7829d37fee73cd8b7a3be7f 291 PANTHER PTHR13774 1 291 4.4E-96 T 19-04-2016 ALIDE2_RS17590 8716e528a9d8978a981544e7e9298292 107 Pfam PF03692 Putative zinc- or iron-chelating domain 5 86 5.3E-9 T 19-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein ALIDE2_RS08910 f3ce79419f2861661a85feff023c0712 718 SUPERFAMILY SSF52540 398 659 5.67E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08910 f3ce79419f2861661a85feff023c0712 718 SUPERFAMILY SSF52540 153 331 5.67E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08910 f3ce79419f2861661a85feff023c0712 718 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 656 0.0 T 19-04-2016 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 ALIDE2_RS08910 f3ce79419f2861661a85feff023c0712 718 Gene3D G3DSA:3.40.50.300 168 267 2.7E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08910 f3ce79419f2861661a85feff023c0712 718 Gene3D G3DSA:3.40.50.300 444 660 2.7E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS08910 f3ce79419f2861661a85feff023c0712 718 Pfam PF12696 TraM recognition site of TraD and TraG 508 635 9.9E-10 T 19-04-2016 IPR032689 TraD/TraG, TraM recognition site ALIDE2_RS08910 f3ce79419f2861661a85feff023c0712 718 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 656 1.4E-261 T 19-04-2016 IPR022458 Conjugative coupling factor TraG/TraD ALIDE2_RS09225 5099753c8dc316ddd5f77b9f774237fd 323 SUPERFAMILY SSF53850 111 282 9.23E-10 T 19-04-2016 ALIDE2_RS09225 5099753c8dc316ddd5f77b9f774237fd 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 320 1.5E-85 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS09225 5099753c8dc316ddd5f77b9f774237fd 323 PANTHER PTHR30349:SF32 4 292 2.5E-90 T 19-04-2016 ALIDE2_RS09225 5099753c8dc316ddd5f77b9f774237fd 323 PANTHER PTHR30349 4 292 2.5E-90 T 19-04-2016 ALIDE2_RS09225 5099753c8dc316ddd5f77b9f774237fd 323 PIRSF PIRSF017082 1 322 7.5E-78 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS06405 a085706a5384e5608edaaea27c7b5f95 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 1.3E-49 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS06405 a085706a5384e5608edaaea27c7b5f95 308 PANTHER PTHR11795:SF371 7 308 5.8E-128 T 19-04-2016 ALIDE2_RS06405 a085706a5384e5608edaaea27c7b5f95 308 PANTHER PTHR11795 7 308 5.8E-128 T 19-04-2016 ALIDE2_RS15290 05fc209fb38fd56570966abd6d1ea13b 250 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 225 246 2.3E-8 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALIDE2_RS15290 05fc209fb38fd56570966abd6d1ea13b 250 PANTHER PTHR24220 7 250 1.1E-90 T 19-04-2016 ALIDE2_RS15290 05fc209fb38fd56570966abd6d1ea13b 250 SMART SM00382 30 224 1.1E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS15290 05fc209fb38fd56570966abd6d1ea13b 250 Gene3D G3DSA:3.40.50.300 2 243 3.6E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15290 05fc209fb38fd56570966abd6d1ea13b 250 Pfam PF00005 ABC transporter 22 176 4.9E-24 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS15290 05fc209fb38fd56570966abd6d1ea13b 250 SUPERFAMILY SSF52540 5 246 1.18E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS15290 05fc209fb38fd56570966abd6d1ea13b 250 PANTHER PTHR24220:SF358 7 250 1.1E-90 T 19-04-2016 ALIDE2_RS14135 1e0b9fbf27a1622125443cd82280a69b 110 PANTHER PTHR30561:SF1 1 110 4.6E-48 T 19-04-2016 ALIDE2_RS14135 1e0b9fbf27a1622125443cd82280a69b 110 PANTHER PTHR30561 1 110 4.6E-48 T 19-04-2016 ALIDE2_RS14135 1e0b9fbf27a1622125443cd82280a69b 110 SUPERFAMILY SSF103481 7 106 2.75E-20 T 19-04-2016 ALIDE2_RS14135 1e0b9fbf27a1622125443cd82280a69b 110 Pfam PF00893 Small Multidrug Resistance protein 4 94 1.0E-27 T 19-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 ALIDE2_RS00290 a8d24a346925f6acd380ac594ec27394 215 SUPERFAMILY SSF53335 8 213 4.6E-40 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS00290 a8d24a346925f6acd380ac594ec27394 215 PIRSF PIRSF003078 4 214 3.8E-50 T 19-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ALIDE2_RS00290 a8d24a346925f6acd380ac594ec27394 215 PANTHER PTHR31760:SF0 7 212 1.0E-60 T 19-04-2016 ALIDE2_RS00290 a8d24a346925f6acd380ac594ec27394 215 Gene3D G3DSA:3.40.50.150 4 213 8.4E-67 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS00290 a8d24a346925f6acd380ac594ec27394 215 Pfam PF02527 rRNA small subunit methyltransferase G 22 205 1.5E-47 T 19-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ALIDE2_RS00290 a8d24a346925f6acd380ac594ec27394 215 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 15 210 26.37 T 19-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ALIDE2_RS00290 a8d24a346925f6acd380ac594ec27394 215 PANTHER PTHR31760 7 212 1.0E-60 T 19-04-2016 ALIDE2_RS00290 a8d24a346925f6acd380ac594ec27394 215 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 27 210 8.5E-47 T 19-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ALIDE2_RS01380 51c8607c87918ad841f487dc752f0214 298 Pfam PF13557 Putative MetA-pathway of phenol degradation 61 279 2.4E-39 T 19-04-2016 IPR025737 MetA-pathway of phenol degradation, putative ALIDE2_RS11755 46de65383b4672dcf0f2d8dbb4d23a41 366 PANTHER PTHR33529 1 366 4.3E-68 T 19-04-2016 ALIDE2_RS11755 46de65383b4672dcf0f2d8dbb4d23a41 366 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 3 360 1.2E-107 T 19-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 ALIDE2_RS11755 46de65383b4672dcf0f2d8dbb4d23a41 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 357 3.7E-64 T 19-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 ALIDE2_RS11755 46de65383b4672dcf0f2d8dbb4d23a41 366 PANTHER PTHR33529:SF1 1 366 4.3E-68 T 19-04-2016 ALIDE2_RS09465 24419b91ddb4473f9b9e3e0b57e66ed9 280 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 12 184 5.4E-5 T 19-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 ALIDE2_RS09465 24419b91ddb4473f9b9e3e0b57e66ed9 280 SUPERFAMILY SSF52402 9 202 1.99E-15 T 19-04-2016 ALIDE2_RS09465 24419b91ddb4473f9b9e3e0b57e66ed9 280 Gene3D G3DSA:3.40.50.620 9 148 1.6E-16 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS06075 b296bac5b6887c96b7d401ab16d89c3f 163 PANTHER PTHR33221 2 134 4.9E-53 T 19-04-2016 ALIDE2_RS06075 b296bac5b6887c96b7d401ab16d89c3f 163 SUPERFAMILY SSF46785 2 135 5.09E-37 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06075 b296bac5b6887c96b7d401ab16d89c3f 163 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 1.9E-35 T 19-04-2016 IPR000944 Transcription regulator Rrf2-type ALIDE2_RS06075 b296bac5b6887c96b7d401ab16d89c3f 163 Gene3D G3DSA:1.10.10.10 1 136 9.5E-44 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS06075 b296bac5b6887c96b7d401ab16d89c3f 163 Pfam PF02082 Transcriptional regulator 1 83 1.6E-25 T 19-04-2016 IPR000944 Transcription regulator Rrf2-type ALIDE2_RS06075 b296bac5b6887c96b7d401ab16d89c3f 163 PANTHER PTHR33221:SF4 2 134 4.9E-53 T 19-04-2016 ALIDE2_RS02410 1685db82327eb72dc55a2838062ada4e 167 SUPERFAMILY SSF54637 8 159 2.13E-33 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS02410 1685db82327eb72dc55a2838062ada4e 167 Gene3D G3DSA:3.10.129.10 7 159 5.1E-34 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS02410 1685db82327eb72dc55a2838062ada4e 167 Pfam PF01575 MaoC like domain 19 120 2.4E-6 T 19-04-2016 IPR002539 MaoC-like domain ALIDE2_RS02410 1685db82327eb72dc55a2838062ada4e 167 PANTHER PTHR13078 12 160 6.0E-30 T 19-04-2016 ALIDE2_RS19195 50667aa5d43a562feae28cdb4fa6ce93 578 Pfam PF06980 Protein of unknown function (DUF1302) 34 578 5.7E-139 T 19-04-2016 IPR010727 Protein of unknown function DUF1302 ALIDE2_RS00320 185473a593958ac449f45fb429ad1a75 346 Gene3D G3DSA:1.10.101.10 291 345 4.9E-16 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS00320 185473a593958ac449f45fb429ad1a75 346 Pfam PF01471 Putative peptidoglycan binding domain 292 344 3.5E-19 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS00320 185473a593958ac449f45fb429ad1a75 346 SUPERFAMILY SSF47090 292 344 2.51E-15 T 19-04-2016 IPR002477 Peptidoglycan binding-like ALIDE2_RS23435 a2ee05915408167b831ab2c35ead3f98 184 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 10 180 4.8E-65 T 19-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 ALIDE2_RS23435 a2ee05915408167b831ab2c35ead3f98 184 Pfam PF00156 Phosphoribosyl transferase domain 37 161 2.7E-15 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 ALIDE2_RS23435 a2ee05915408167b831ab2c35ead3f98 184 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 10 181 37.387 T 19-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 ALIDE2_RS23435 a2ee05915408167b831ab2c35ead3f98 184 PANTHER PTHR32315 5 184 8.0E-81 T 19-04-2016 ALIDE2_RS23435 a2ee05915408167b831ab2c35ead3f98 184 Gene3D G3DSA:3.40.50.2020 8 182 1.0E-66 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS23435 a2ee05915408167b831ab2c35ead3f98 184 SUPERFAMILY SSF53271 11 181 3.23E-53 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS22920 9f0f3ce452a06dbab6380f64cd1c3196 324 SUPERFAMILY SSF53187 6 319 3.97E-53 T 19-04-2016 ALIDE2_RS22920 9f0f3ce452a06dbab6380f64cd1c3196 324 Gene3D G3DSA:3.40.630.10 32 216 5.2E-9 T 19-04-2016 ALIDE2_RS22920 9f0f3ce452a06dbab6380f64cd1c3196 324 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 36 186 2.1E-12 T 19-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 ALIDE2_RS03925 e01e0a790951142304dd623bcd74e78d 444 Pfam PF01578 Cytochrome C assembly protein 179 439 4.3E-47 T 19-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ALIDE2_RS03925 e01e0a790951142304dd623bcd74e78d 444 PANTHER PTHR30071 343 443 2.6E-63 T 19-04-2016 ALIDE2_RS03925 e01e0a790951142304dd623bcd74e78d 444 PANTHER PTHR30071 37 289 2.6E-63 T 19-04-2016 ALIDE2_RS03925 e01e0a790951142304dd623bcd74e78d 444 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 149 442 3.1E-78 T 19-04-2016 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 ALIDE2_RS04610 eb0d2a08080ec9b1b401d3d6ed6f2769 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 2 19 2.1E-10 T 19-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 ALIDE2_RS04610 eb0d2a08080ec9b1b401d3d6ed6f2769 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 19 40 2.1E-10 T 19-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 ALIDE2_RS04610 eb0d2a08080ec9b1b401d3d6ed6f2769 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 128 141 2.1E-10 T 19-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 ALIDE2_RS04610 eb0d2a08080ec9b1b401d3d6ed6f2769 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 2.1E-10 T 19-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 ALIDE2_RS04610 eb0d2a08080ec9b1b401d3d6ed6f2769 148 Gene3D G3DSA:3.90.79.10 3 143 9.7E-23 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS04610 eb0d2a08080ec9b1b401d3d6ed6f2769 148 SUPERFAMILY SSF55811 2 145 4.6E-22 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ALIDE2_RS04610 eb0d2a08080ec9b1b401d3d6ed6f2769 148 PANTHER PTHR22769 1 141 2.7E-19 T 19-04-2016 ALIDE2_RS04610 eb0d2a08080ec9b1b401d3d6ed6f2769 148 Pfam PF00293 NUDIX domain 6 144 1.2E-12 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ALIDE2_RS04610 eb0d2a08080ec9b1b401d3d6ed6f2769 148 PANTHER PTHR22769:SF28 1 141 2.7E-19 T 19-04-2016 ALIDE2_RS11990 70cb5841db1f26e9993324cc2c58ff53 370 Gene3D G3DSA:3.50.50.60 140 218 5.7E-31 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11990 70cb5841db1f26e9993324cc2c58ff53 370 Gene3D G3DSA:3.50.50.60 2 85 5.7E-31 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11990 70cb5841db1f26e9993324cc2c58ff53 370 Gene3D G3DSA:3.50.50.60 323 368 5.7E-31 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11990 70cb5841db1f26e9993324cc2c58ff53 370 Gene3D G3DSA:3.30.9.10 87 139 3.0E-6 T 19-04-2016 ALIDE2_RS11990 70cb5841db1f26e9993324cc2c58ff53 370 PANTHER PTHR13847 1 367 2.8E-164 T 19-04-2016 ALIDE2_RS11990 70cb5841db1f26e9993324cc2c58ff53 370 SUPERFAMILY SSF51905 5 220 3.45E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11990 70cb5841db1f26e9993324cc2c58ff53 370 SUPERFAMILY SSF51905 325 367 3.45E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS11990 70cb5841db1f26e9993324cc2c58ff53 370 Pfam PF01266 FAD dependent oxidoreductase 6 364 1.7E-67 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ALIDE2_RS11990 70cb5841db1f26e9993324cc2c58ff53 370 PANTHER PTHR13847:SF207 1 367 2.8E-164 T 19-04-2016 ALIDE2_RS20900 f897d32d0986d7edf47bc0138372c9fd 311 Pfam PF00691 OmpA family 171 264 1.5E-12 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS20900 f897d32d0986d7edf47bc0138372c9fd 311 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 14 65 9.6E-18 T 19-04-2016 IPR025713 Motility protein B, N-terminal domain ALIDE2_RS20900 f897d32d0986d7edf47bc0138372c9fd 311 Gene3D G3DSA:3.30.1330.60 165 275 2.3E-16 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS20900 f897d32d0986d7edf47bc0138372c9fd 311 SUPERFAMILY SSF103088 157 275 3.79E-19 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS20900 f897d32d0986d7edf47bc0138372c9fd 311 PANTHER PTHR30329:SF2 1 299 3.5E-102 T 19-04-2016 ALIDE2_RS20900 f897d32d0986d7edf47bc0138372c9fd 311 PANTHER PTHR30329 1 299 3.5E-102 T 19-04-2016 ALIDE2_RS11210 53a455fc01c0eea2fcd8c903d36c6e62 320 SUPERFAMILY SSF74653 231 318 4.19E-14 T 19-04-2016 ALIDE2_RS11210 53a455fc01c0eea2fcd8c903d36c6e62 320 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 259 316 4.4E-7 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 ALIDE2_RS11210 53a455fc01c0eea2fcd8c903d36c6e62 320 SUPERFAMILY SSF101447 86 96 9.68E-6 T 19-04-2016 ALIDE2_RS11210 53a455fc01c0eea2fcd8c903d36c6e62 320 TIGRFAM TIGR02794 tolA_full: protein TolA 20 303 2.8E-29 T 19-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS11210 53a455fc01c0eea2fcd8c903d36c6e62 320 Pfam PF13103 TonB C terminal 234 316 1.5E-21 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 ALIDE2_RS11210 53a455fc01c0eea2fcd8c903d36c6e62 320 Gene3D G3DSA:3.30.1150.10 211 320 2.9E-27 T 19-04-2016 ALIDE2_RS12945 8bbacbb99988cf21ded1e1010562a2b5 154 PANTHER PTHR10093 1 140 1.1E-30 T 19-04-2016 ALIDE2_RS12945 8bbacbb99988cf21ded1e1010562a2b5 154 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 139 2.0E-46 T 19-04-2016 ALIDE2_RS12945 8bbacbb99988cf21ded1e1010562a2b5 154 Gene3D G3DSA:3.90.1010.10 8 141 1.3E-39 T 19-04-2016 ALIDE2_RS12945 8bbacbb99988cf21ded1e1010562a2b5 154 SUPERFAMILY SSF82649 6 141 4.71E-47 T 19-04-2016 ALIDE2_RS12945 8bbacbb99988cf21ded1e1010562a2b5 154 Pfam PF01592 NifU-like N terminal domain 9 127 3.9E-24 T 19-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 ALIDE2_RS11695 3e94c2008fe36a0c7bd654d84457dcac 159 PANTHER PTHR30154 1 156 5.9E-44 T 19-04-2016 ALIDE2_RS11695 3e94c2008fe36a0c7bd654d84457dcac 159 PANTHER PTHR30154:SF27 1 156 5.9E-44 T 19-04-2016 ALIDE2_RS11695 3e94c2008fe36a0c7bd654d84457dcac 159 Gene3D G3DSA:1.10.10.10 1 57 1.1E-6 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS00580 9937a2b460a036cf9232d732e09f75fc 66 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 23 55 5.2E-8 T 19-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 ALIDE2_RS20475 a1cbe2e5c40f3e9d750a5948d0e31a41 339 SUPERFAMILY SSF56935 23 339 5.19E-62 T 19-04-2016 ALIDE2_RS20475 a1cbe2e5c40f3e9d750a5948d0e31a41 339 Pfam PF13609 Gram-negative porin 11 316 1.6E-55 T 19-04-2016 ALIDE2_RS20475 a1cbe2e5c40f3e9d750a5948d0e31a41 339 Gene3D G3DSA:2.40.160.10 25 339 7.2E-67 T 19-04-2016 IPR023614 Porin domain ALIDE2_RS01035 b6047ff1e618ac0447921431bb95adbf 632 PANTHER PTHR11795:SF381 4 306 3.9E-104 T 19-04-2016 ALIDE2_RS01035 b6047ff1e618ac0447921431bb95adbf 632 PANTHER PTHR11795 4 306 3.9E-104 T 19-04-2016 ALIDE2_RS01035 b6047ff1e618ac0447921431bb95adbf 632 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 290 2.1E-33 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS01035 b6047ff1e618ac0447921431bb95adbf 632 Pfam PF02653 Branched-chain amino acid transport system / permease component 348 605 8.6E-35 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS14570 753637a78431c8335424e616d73e244c 139 PANTHER PTHR35813 9 137 8.8E-29 T 19-04-2016 ALIDE2_RS14570 753637a78431c8335424e616d73e244c 139 PANTHER PTHR35813:SF1 9 137 8.8E-29 T 19-04-2016 ALIDE2_RS14570 753637a78431c8335424e616d73e244c 139 Pfam PF04304 Protein of unknown function (DUF454) 22 136 7.2E-34 T 19-04-2016 IPR007401 Protein of unknown function DUF454 ALIDE2_RS14570 753637a78431c8335424e616d73e244c 139 PIRSF PIRSF016789 21 139 3.2E-31 T 19-04-2016 IPR007401 Protein of unknown function DUF454 ALIDE2_RS05010 1044c63186b944a9d6601c622abff7d3 244 SUPERFAMILY SSF56436 35 203 9.42E-27 T 19-04-2016 IPR016187 C-type lectin fold ALIDE2_RS05010 1044c63186b944a9d6601c622abff7d3 244 Gene3D G3DSA:3.10.100.10 35 223 1.6E-31 T 19-04-2016 IPR016186 C-type lectin-like ALIDE2_RS07000 7cded429a5b3e8bc258b479558d60200 332 Pfam PF00849 RNA pseudouridylate synthase 114 270 3.6E-29 T 19-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS07000 7cded429a5b3e8bc258b479558d60200 332 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 36 325 8.9E-90 T 19-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS07000 7cded429a5b3e8bc258b479558d60200 332 PANTHER PTHR11079:SF73 10 332 2.9E-116 T 19-04-2016 ALIDE2_RS07000 7cded429a5b3e8bc258b479558d60200 332 SMART SM00363 39 105 4.4E-9 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS07000 7cded429a5b3e8bc258b479558d60200 332 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 157 171 - T 19-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS07000 7cded429a5b3e8bc258b479558d60200 332 SUPERFAMILY SSF55120 100 330 3.12E-74 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ALIDE2_RS07000 7cded429a5b3e8bc258b479558d60200 332 PANTHER PTHR11079 10 332 2.9E-116 T 19-04-2016 ALIDE2_RS07000 7cded429a5b3e8bc258b479558d60200 332 SUPERFAMILY SSF55174 39 92 2.75E-11 T 19-04-2016 ALIDE2_RS07000 7cded429a5b3e8bc258b479558d60200 332 Pfam PF01479 S4 domain 40 86 1.0E-9 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS07000 7cded429a5b3e8bc258b479558d60200 332 Gene3D G3DSA:3.10.290.10 39 92 8.8E-14 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 ALIDE2_RS21080 bc1378ab35819407f369f34412d391b6 772 Gene3D G3DSA:2.40.170.20 176 771 8.6E-81 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS21080 bc1378ab35819407f369f34412d391b6 772 PANTHER PTHR32552:SF0 277 772 4.8E-62 T 19-04-2016 ALIDE2_RS21080 bc1378ab35819407f369f34412d391b6 772 PANTHER PTHR32552:SF0 42 237 4.8E-62 T 19-04-2016 ALIDE2_RS21080 bc1378ab35819407f369f34412d391b6 772 Pfam PF00593 TonB dependent receptor 525 770 3.3E-31 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS21080 bc1378ab35819407f369f34412d391b6 772 Gene3D G3DSA:2.170.130.10 33 175 8.4E-18 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS21080 bc1378ab35819407f369f34412d391b6 772 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 172 1.5E-10 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS21080 bc1378ab35819407f369f34412d391b6 772 PANTHER PTHR32552 277 772 4.8E-62 T 19-04-2016 ALIDE2_RS21080 bc1378ab35819407f369f34412d391b6 772 PANTHER PTHR32552 42 237 4.8E-62 T 19-04-2016 ALIDE2_RS21080 bc1378ab35819407f369f34412d391b6 772 SUPERFAMILY SSF56935 32 239 4.79E-92 T 19-04-2016 ALIDE2_RS21080 bc1378ab35819407f369f34412d391b6 772 SUPERFAMILY SSF56935 280 771 4.79E-92 T 19-04-2016 ALIDE2_RS00440 eb28900b53e56fdfdd347751d6596974 207 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 21 163 1.6E-34 T 19-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 ALIDE2_RS00440 eb28900b53e56fdfdd347751d6596974 207 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 64 86 - T 19-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ALIDE2_RS00440 eb28900b53e56fdfdd347751d6596974 207 PANTHER PTHR15362:SF2 8 151 1.4E-42 T 19-04-2016 ALIDE2_RS00440 eb28900b53e56fdfdd347751d6596974 207 PANTHER PTHR15362 8 151 1.4E-42 T 19-04-2016 ALIDE2_RS00440 eb28900b53e56fdfdd347751d6596974 207 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 86 3.0E-13 T 19-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ALIDE2_RS09000 7f8d92d2b51049ff1d6ee7fff27f68c6 962 SUPERFAMILY SSF52540 648 903 9.1E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09000 7f8d92d2b51049ff1d6ee7fff27f68c6 962 SUPERFAMILY SSF52540 484 612 9.1E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09000 7f8d92d2b51049ff1d6ee7fff27f68c6 962 Gene3D G3DSA:3.40.50.300 530 610 2.1E-13 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09000 7f8d92d2b51049ff1d6ee7fff27f68c6 962 Gene3D G3DSA:3.40.50.300 742 866 2.1E-13 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09000 7f8d92d2b51049ff1d6ee7fff27f68c6 962 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 66 340 1.6E-74 T 19-04-2016 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase ALIDE2_RS09000 7f8d92d2b51049ff1d6ee7fff27f68c6 962 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 55 952 0.0 T 19-04-2016 IPR022303 Conjugative transfer ATPase ALIDE2_RS01355 7b3c36013f8cd73f70549fb2d245a6df 118 Pfam PF04663 Phenol hydroxylase conserved region 14 78 1.3E-29 T 19-04-2016 IPR006756 Phenol hydroxylase KEGG: 00361+1.14.13.7|KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|UniPathway: UPA00728 ALIDE2_RS09525 2914d5d04519d01facbfd19b21685586 243 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 47 241 4.7E-86 T 19-04-2016 IPR022293 Integrating conjugative element protein, PFL4693 ALIDE2_RS00400 80eca9c9425181336c4e1db9c0b6e446 236 Pfam PF05050 Methyltransferase FkbM domain 45 207 2.5E-10 T 19-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- ALIDE2_RS00400 80eca9c9425181336c4e1db9c0b6e446 236 PANTHER PTHR36973 23 235 6.1E-28 T 19-04-2016 ALIDE2_RS00400 80eca9c9425181336c4e1db9c0b6e446 236 PANTHER PTHR36973:SF1 23 235 6.1E-28 T 19-04-2016 ALIDE2_RS00400 80eca9c9425181336c4e1db9c0b6e446 236 SUPERFAMILY SSF53335 17 208 2.33E-29 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS00400 80eca9c9425181336c4e1db9c0b6e446 236 Gene3D G3DSA:3.40.50.150 42 207 3.5E-23 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS00400 80eca9c9425181336c4e1db9c0b6e446 236 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 43 182 6.9E-22 T 19-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- ALIDE2_RS18685 e540a9125d2088fdb93437ccc5b27a77 360 PANTHER PTHR33376:SF5 1 342 4.8E-124 T 19-04-2016 ALIDE2_RS18685 e540a9125d2088fdb93437ccc5b27a77 360 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 322 2.3E-55 T 19-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 ALIDE2_RS18685 e540a9125d2088fdb93437ccc5b27a77 360 PANTHER PTHR33376 1 342 4.8E-124 T 19-04-2016 ALIDE2_RS18685 e540a9125d2088fdb93437ccc5b27a77 360 PIRSF PIRSF039026 1 356 1.6E-109 T 19-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like ALIDE2_RS10280 377f37904f4f49d8012635b5082f0b8b 476 Pfam PF13091 PLD-like domain 319 442 5.3E-29 T 19-04-2016 IPR025202 Phospholipase D-like domain ALIDE2_RS10280 377f37904f4f49d8012635b5082f0b8b 476 Pfam PF13091 PLD-like domain 128 270 1.4E-18 T 19-04-2016 IPR025202 Phospholipase D-like domain ALIDE2_RS10280 377f37904f4f49d8012635b5082f0b8b 476 Gene3D G3DSA:3.30.870.10 107 306 5.3E-49 T 19-04-2016 ALIDE2_RS10280 377f37904f4f49d8012635b5082f0b8b 476 Gene3D G3DSA:3.30.870.10 315 450 4.3E-33 T 19-04-2016 ALIDE2_RS10280 377f37904f4f49d8012635b5082f0b8b 476 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 26 476 2.5E-91 T 19-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 ALIDE2_RS10280 377f37904f4f49d8012635b5082f0b8b 476 SUPERFAMILY SSF56024 292 462 2.0E-41 T 19-04-2016 ALIDE2_RS10280 377f37904f4f49d8012635b5082f0b8b 476 SUPERFAMILY SSF56024 75 307 1.18E-50 T 19-04-2016 ALIDE2_RS10280 377f37904f4f49d8012635b5082f0b8b 476 SMART SM00155 389 416 3.8E-4 T 19-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 ALIDE2_RS10280 377f37904f4f49d8012635b5082f0b8b 476 SMART SM00155 210 237 2.9E-4 T 19-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 ALIDE2_RS10280 377f37904f4f49d8012635b5082f0b8b 476 PANTHER PTHR21248 17 476 5.4E-97 T 19-04-2016 ALIDE2_RS10280 377f37904f4f49d8012635b5082f0b8b 476 PANTHER PTHR21248:SF5 17 476 5.4E-97 T 19-04-2016 ALIDE2_RS10280 377f37904f4f49d8012635b5082f0b8b 476 Pfam PF13396 Phospholipase_D-nuclease N-terminal 27 58 9.2E-7 T 19-04-2016 IPR027379 Cardiolipin synthase N-terminal ALIDE2_RS11250 14fd3701fe6b51cd5b7bc42612827f15 95 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 84 1.1E-12 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS11250 14fd3701fe6b51cd5b7bc42612827f15 95 Gene3D G3DSA:3.10.20.30 7 92 1.3E-24 T 19-04-2016 IPR012675 Beta-grasp domain ALIDE2_RS11250 14fd3701fe6b51cd5b7bc42612827f15 95 SUPERFAMILY SSF54292 6 92 1.44E-24 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ALIDE2_RS06190 0543c0636184a40d77b9857683c11f6d 310 SUPERFAMILY SSF103481 47 154 3.53E-10 T 19-04-2016 ALIDE2_RS06190 0543c0636184a40d77b9857683c11f6d 310 PANTHER PTHR22911 11 308 1.1E-42 T 19-04-2016 ALIDE2_RS06190 0543c0636184a40d77b9857683c11f6d 310 SUPERFAMILY SSF103481 215 309 2.75E-10 T 19-04-2016 ALIDE2_RS06190 0543c0636184a40d77b9857683c11f6d 310 PANTHER PTHR22911:SF65 11 308 1.1E-42 T 19-04-2016 ALIDE2_RS16205 6854aed3e7da15e6c8163e56e591435b 591 Gene3D G3DSA:3.40.630.10 352 458 3.5E-10 T 19-04-2016 ALIDE2_RS16205 6854aed3e7da15e6c8163e56e591435b 591 SUPERFAMILY SSF53187 334 463 6.95E-16 T 19-04-2016 ALIDE2_RS20535 3b9d27513eb2925bec6a06e5b13ce749 239 Pfam PF13548 Domain of unknown function (DUF4126) 44 214 1.0E-47 T 19-04-2016 IPR025196 Domain of unknown function DUF4126 ALIDE2_RS17795 03f3d4d99daea09d8c4efc760bf7d1b4 256 Pfam PF00005 ABC transporter 22 177 2.1E-29 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS17795 03f3d4d99daea09d8c4efc760bf7d1b4 256 SUPERFAMILY SSF52540 4 247 1.04E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17795 03f3d4d99daea09d8c4efc760bf7d1b4 256 Gene3D G3DSA:3.40.50.300 2 244 5.0E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS17795 03f3d4d99daea09d8c4efc760bf7d1b4 256 SMART SM00382 30 224 2.6E-5 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS17795 03f3d4d99daea09d8c4efc760bf7d1b4 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 225 246 3.1E-8 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALIDE2_RS17795 03f3d4d99daea09d8c4efc760bf7d1b4 256 PANTHER PTHR24220 7 246 4.9E-117 T 19-04-2016 ALIDE2_RS17795 03f3d4d99daea09d8c4efc760bf7d1b4 256 PANTHER PTHR24220:SF400 7 246 4.9E-117 T 19-04-2016 ALIDE2_RS03185 255c1604ac7bc4ff30f476f83ab3e275 258 Gene3D G3DSA:3.90.226.10 3 255 1.0E-77 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS03185 255c1604ac7bc4ff30f476f83ab3e275 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 256 2.8E-52 T 19-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ALIDE2_RS03185 255c1604ac7bc4ff30f476f83ab3e275 258 SUPERFAMILY SSF52096 4 256 3.11E-76 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS03185 255c1604ac7bc4ff30f476f83ab3e275 258 PANTHER PTHR11941 1 255 3.0E-94 T 19-04-2016 ALIDE2_RS03185 255c1604ac7bc4ff30f476f83ab3e275 258 PANTHER PTHR11941:SF17 1 255 3.0E-94 T 19-04-2016 ALIDE2_RS12920 e0a3d3b7c62f9c8157a62cdbdfb7006e 166 PANTHER PTHR11049 7 157 4.5E-68 T 19-04-2016 ALIDE2_RS12920 e0a3d3b7c62f9c8157a62cdbdfb7006e 166 SUPERFAMILY SSF54637 5 156 8.57E-46 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS12920 e0a3d3b7c62f9c8157a62cdbdfb7006e 166 Pfam PF03061 Thioesterase superfamily 23 96 1.5E-19 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS12920 e0a3d3b7c62f9c8157a62cdbdfb7006e 166 Gene3D G3DSA:3.10.129.10 5 154 3.9E-54 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS07685 2b73dd451f69f9e8cb201ca1547cdf05 468 Gene3D G3DSA:3.30.1330.120 276 411 6.2E-11 T 19-04-2016 ALIDE2_RS07685 2b73dd451f69f9e8cb201ca1547cdf05 468 Pfam PF03972 MmgE/PrpD family 14 452 3.6E-91 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS07685 2b73dd451f69f9e8cb201ca1547cdf05 468 PANTHER PTHR16943 14 452 1.3E-66 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS07685 2b73dd451f69f9e8cb201ca1547cdf05 468 PANTHER PTHR16943:SF8 14 452 1.3E-66 T 19-04-2016 ALIDE2_RS07685 2b73dd451f69f9e8cb201ca1547cdf05 468 SUPERFAMILY SSF103378 10 460 9.15E-96 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS07470 30b54cda64cd09c591c625964e114a90 113 PANTHER PTHR13943 3 97 2.3E-32 T 19-04-2016 ALIDE2_RS07470 30b54cda64cd09c591c625964e114a90 113 PANTHER PTHR13943:SF48 3 97 2.3E-32 T 19-04-2016 ALIDE2_RS17915 edb39ff23f2f2fcde8eaa7d5fa15c0e0 102 PANTHER PTHR24012 2 102 3.6E-29 T 19-04-2016 ALIDE2_RS17915 edb39ff23f2f2fcde8eaa7d5fa15c0e0 102 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 74 7.4E-22 T 19-04-2016 IPR000504 RNA recognition motif domain GO:0003676 ALIDE2_RS17915 edb39ff23f2f2fcde8eaa7d5fa15c0e0 102 SUPERFAMILY SSF54928 3 101 8.06E-32 T 19-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 ALIDE2_RS17915 edb39ff23f2f2fcde8eaa7d5fa15c0e0 102 SMART SM00360 4 77 1.7E-27 T 19-04-2016 IPR000504 RNA recognition motif domain GO:0003676 ALIDE2_RS17915 edb39ff23f2f2fcde8eaa7d5fa15c0e0 102 Gene3D G3DSA:3.30.70.330 2 96 1.7E-31 T 19-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 ALIDE2_RS02785 10e12c7ef940cdb54ba0091933cc79bb 361 SUPERFAMILY SSF53335 9 353 1.36E-87 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS02785 10e12c7ef940cdb54ba0091933cc79bb 361 Gene3D G3DSA:3.40.50.150 72 133 8.0E-5 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS02785 10e12c7ef940cdb54ba0091933cc79bb 361 PANTHER PTHR12049 8 357 4.0E-47 T 19-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA ALIDE2_RS02785 10e12c7ef940cdb54ba0091933cc79bb 361 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 78 296 7.7E-44 T 19-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA ALIDE2_RS19640 2cdb1eaf7ac2ed0857e0ba0750b64d6b 308 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 25 305 7.3E-93 T 19-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 ALIDE2_RS19640 2cdb1eaf7ac2ed0857e0ba0750b64d6b 308 Pfam PF01040 UbiA prenyltransferase family 39 289 3.8E-60 T 19-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 ALIDE2_RS19640 2cdb1eaf7ac2ed0857e0ba0750b64d6b 308 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 22 306 18.975 T 19-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 ALIDE2_RS19640 2cdb1eaf7ac2ed0857e0ba0750b64d6b 308 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 80 102 - T 19-04-2016 IPR030470 UbiA prenyltransferase conserved site ALIDE2_RS19640 2cdb1eaf7ac2ed0857e0ba0750b64d6b 308 PANTHER PTHR11048 1 308 7.1E-72 T 19-04-2016 ALIDE2_RS20305 e09217706eb60d291643e198d5964ff2 289 PANTHER PTHR32308 1 286 9.6E-67 T 19-04-2016 IPR011206 Citrate lyase beta subunit-like ALIDE2_RS20305 e09217706eb60d291643e198d5964ff2 289 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 2 221 1.3E-41 T 19-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ALIDE2_RS20305 e09217706eb60d291643e198d5964ff2 289 Gene3D G3DSA:3.20.20.60 1 231 2.3E-64 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS20305 e09217706eb60d291643e198d5964ff2 289 SUPERFAMILY SSF51621 1 231 4.19E-56 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ALIDE2_RS20305 e09217706eb60d291643e198d5964ff2 289 PANTHER PTHR32308:SF0 1 286 9.6E-67 T 19-04-2016 ALIDE2_RS20305 e09217706eb60d291643e198d5964ff2 289 PIRSF PIRSF015582 1 289 2.8E-74 T 19-04-2016 IPR011206 Citrate lyase beta subunit-like ALIDE2_RS00645 5fbd7c6482e44d599ff154b4d8a7d406 328 Gene3D G3DSA:3.40.190.10 133 241 3.0E-4 T 19-04-2016 ALIDE2_RS00645 5fbd7c6482e44d599ff154b4d8a7d406 328 PIRSF PIRSF017082 1 328 1.6E-83 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00645 5fbd7c6482e44d599ff154b4d8a7d406 328 SUPERFAMILY SSF53850 121 290 1.34E-11 T 19-04-2016 ALIDE2_RS00645 5fbd7c6482e44d599ff154b4d8a7d406 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 323 1.3E-80 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00645 5fbd7c6482e44d599ff154b4d8a7d406 328 PANTHER PTHR30349:SF32 5 298 6.3E-83 T 19-04-2016 ALIDE2_RS00645 5fbd7c6482e44d599ff154b4d8a7d406 328 PANTHER PTHR30349 5 298 6.3E-83 T 19-04-2016 ALIDE2_RS01720 f4993d83d90fe4814b4c97b7754c592f 113 PANTHER PTHR11780 10 106 6.8E-27 T 19-04-2016 ALIDE2_RS01720 f4993d83d90fe4814b4c97b7754c592f 113 Gene3D G3DSA:3.40.30.10 9 107 3.8E-32 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS01720 f4993d83d90fe4814b4c97b7754c592f 113 PANTHER PTHR11780:SF12 10 106 6.8E-27 T 19-04-2016 ALIDE2_RS01720 f4993d83d90fe4814b4c97b7754c592f 113 SUPERFAMILY SSF52833 9 108 1.57E-25 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS00875 de04b5114228d1b0e68e38c2714bb36a 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 321 7.0E-71 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00875 de04b5114228d1b0e68e38c2714bb36a 328 PIRSF PIRSF017082 1 324 1.7E-82 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00875 de04b5114228d1b0e68e38c2714bb36a 328 PANTHER PTHR30349 1 320 2.8E-73 T 19-04-2016 ALIDE2_RS00875 de04b5114228d1b0e68e38c2714bb36a 328 SUPERFAMILY SSF53850 117 288 3.86E-9 T 19-04-2016 ALIDE2_RS00875 de04b5114228d1b0e68e38c2714bb36a 328 PANTHER PTHR30349:SF16 1 320 2.8E-73 T 19-04-2016 ALIDE2_RS02885 a72d036954db673bb18a16c0ef9dff36 365 Pfam PF01070 FMN-dependent dehydrogenase 23 361 6.5E-111 T 19-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 ALIDE2_RS02885 a72d036954db673bb18a16c0ef9dff36 365 Gene3D G3DSA:3.20.20.70 13 361 8.9E-113 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS02885 a72d036954db673bb18a16c0ef9dff36 365 PIRSF PIRSF000138 4 364 2.4E-111 T 19-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 ALIDE2_RS02885 a72d036954db673bb18a16c0ef9dff36 365 PANTHER PTHR10578:SF65 13 363 5.9E-114 T 19-04-2016 ALIDE2_RS02885 a72d036954db673bb18a16c0ef9dff36 365 PANTHER PTHR10578 13 363 5.9E-114 T 19-04-2016 ALIDE2_RS02885 a72d036954db673bb18a16c0ef9dff36 365 SUPERFAMILY SSF51395 11 361 1.16E-80 T 19-04-2016 ALIDE2_RS19580 ad0005932231e20c7ce5672bf105b152 158 PANTHER PTHR12029 1 149 1.2E-65 T 19-04-2016 ALIDE2_RS19580 ad0005932231e20c7ce5672bf105b152 158 PIRSF PIRSF029256 1 155 3.4E-60 T 19-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 ALIDE2_RS19580 ad0005932231e20c7ce5672bf105b152 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 31.444 T 19-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 ALIDE2_RS19580 ad0005932231e20c7ce5672bf105b152 158 PANTHER PTHR12029:SF31 1 149 1.2E-65 T 19-04-2016 ALIDE2_RS19580 ad0005932231e20c7ce5672bf105b152 158 Gene3D G3DSA:3.40.1280.10 1 152 1.4E-60 T 19-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ALIDE2_RS19580 ad0005932231e20c7ce5672bf105b152 158 Pfam PF00588 SpoU rRNA Methylase family 2 144 2.9E-29 T 19-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ALIDE2_RS19580 ad0005932231e20c7ce5672bf105b152 158 SUPERFAMILY SSF75217 1 151 6.41E-41 T 19-04-2016 IPR029028 Alpha/beta knot methyltransferases ALIDE2_RS10725 8c74a7cda98c250095fddd0ee0e5d710 167 Pfam PF13511 Domain of unknown function (DUF4124) 9 63 2.8E-7 T 19-04-2016 IPR025392 Domain of unknown function DUF4124 ALIDE2_RS08995 89497f8c58b2f8a117d0265a05c1c6ec 144 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 12 140 1.6E-54 T 19-04-2016 IPR022262 Lipoprotein, putative ALIDE2_RS09375 f915a07cb27abeb5efefa26bbf55189e 252 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 207 226 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ALIDE2_RS09375 f915a07cb27abeb5efefa26bbf55189e 252 PANTHER PTHR10909:SF305 1 252 1.7E-94 T 19-04-2016 ALIDE2_RS09375 f915a07cb27abeb5efefa26bbf55189e 252 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 94 248 1.9E-43 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS09375 f915a07cb27abeb5efefa26bbf55189e 252 SUPERFAMILY SSF47203 92 251 9.34E-53 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS09375 f915a07cb27abeb5efefa26bbf55189e 252 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 8 81 1.4E-19 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS09375 f915a07cb27abeb5efefa26bbf55189e 252 Gene3D G3DSA:2.40.110.10 5 81 2.6E-29 T 19-04-2016 ALIDE2_RS09375 f915a07cb27abeb5efefa26bbf55189e 252 SUPERFAMILY SSF56645 5 107 2.23E-32 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS09375 f915a07cb27abeb5efefa26bbf55189e 252 Gene3D G3DSA:1.20.140.10 82 251 1.3E-60 T 19-04-2016 ALIDE2_RS09375 f915a07cb27abeb5efefa26bbf55189e 252 PANTHER PTHR10909 1 252 1.7E-94 T 19-04-2016 ALIDE2_RS08255 09aba0471a11ecae0a5c801e6b8a16af 179 SUPERFAMILY SSF160930 7 161 5.1E-56 T 19-04-2016 ALIDE2_RS08255 09aba0471a11ecae0a5c801e6b8a16af 179 Pfam PF05280 Flagellar transcriptional activator (FlhC) 5 172 1.9E-75 T 19-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 ALIDE2_RS08255 09aba0471a11ecae0a5c801e6b8a16af 179 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 6 169 1.0E-71 T 19-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 ALIDE2_RS08255 09aba0471a11ecae0a5c801e6b8a16af 179 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 3 178 42.203 T 19-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 ALIDE2_RS08255 09aba0471a11ecae0a5c801e6b8a16af 179 PIRSF PIRSF003159 3 179 2.5E-81 T 19-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 ALIDE2_RS08720 f87ad754e448ec0ab9f805478bbb73ce 262 Pfam PF08900 Domain of unknown function (DUF1845) 13 223 1.7E-80 T 19-04-2016 IPR014996 Integrating conjugative element protein, PFL4669 ALIDE2_RS08720 f87ad754e448ec0ab9f805478bbb73ce 262 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 14 226 1.3E-88 T 19-04-2016 IPR014996 Integrating conjugative element protein, PFL4669 ALIDE2_RS06870 33be6d2a5eaab102c127549f905e5099 406 PANTHER PTHR13789 4 386 2.0E-71 T 19-04-2016 ALIDE2_RS06870 33be6d2a5eaab102c127549f905e5099 406 Gene3D G3DSA:3.50.50.60 281 368 1.2E-31 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS06870 33be6d2a5eaab102c127549f905e5099 406 Gene3D G3DSA:3.50.50.60 1 182 1.2E-31 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS06870 33be6d2a5eaab102c127549f905e5099 406 SUPERFAMILY SSF54373 182 286 2.31E-12 T 19-04-2016 ALIDE2_RS06870 33be6d2a5eaab102c127549f905e5099 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 328 1.2E-15 T 19-04-2016 ALIDE2_RS06870 33be6d2a5eaab102c127549f905e5099 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.2E-15 T 19-04-2016 ALIDE2_RS06870 33be6d2a5eaab102c127549f905e5099 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.2E-15 T 19-04-2016 ALIDE2_RS06870 33be6d2a5eaab102c127549f905e5099 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 1.2E-15 T 19-04-2016 ALIDE2_RS06870 33be6d2a5eaab102c127549f905e5099 406 SUPERFAMILY SSF51905 281 388 1.11E-53 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS06870 33be6d2a5eaab102c127549f905e5099 406 SUPERFAMILY SSF51905 3 177 1.11E-53 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ALIDE2_RS06870 33be6d2a5eaab102c127549f905e5099 406 PANTHER PTHR13789:SF186 4 386 2.0E-71 T 19-04-2016 ALIDE2_RS06870 33be6d2a5eaab102c127549f905e5099 406 Pfam PF01494 FAD binding domain 4 335 5.5E-16 T 19-04-2016 IPR002938 FAD-binding domain GO:0071949 ALIDE2_RS06350 b37d2faeada9791ed7420b109c0f5b63 121 Pfam PF16137 Domain of unknown function (DUF4845) 37 116 2.3E-24 T 19-04-2016 IPR032314 Protein of unknown function DUF4845 ALIDE2_RS23095 baddf731367f88aab5307082ca9dc1ad 105 Pfam PF03413 Peptidase propeptide and YPEB domain 43 99 2.8E-10 T 19-04-2016 IPR025711 PepSY domain ALIDE2_RS04270 d6b89a3792047cbc4d5029d629ec321f 142 PANTHER PTHR30266:SF2 1 142 7.7E-45 T 19-04-2016 ALIDE2_RS04270 d6b89a3792047cbc4d5029d629ec321f 142 SUPERFAMILY SSF81330 12 137 7.19E-35 T 19-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 ALIDE2_RS04270 d6b89a3792047cbc4d5029d629ec321f 142 PANTHER PTHR30266 1 142 7.7E-45 T 19-04-2016 ALIDE2_RS04270 d6b89a3792047cbc4d5029d629ec321f 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 3.7E-12 T 19-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 ALIDE2_RS04270 d6b89a3792047cbc4d5029d629ec321f 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 94 102 3.7E-12 T 19-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 ALIDE2_RS04270 d6b89a3792047cbc4d5029d629ec321f 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 103 112 3.7E-12 T 19-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 ALIDE2_RS04270 d6b89a3792047cbc4d5029d629ec321f 142 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 141 5.1E-42 T 19-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 ALIDE2_RS04270 d6b89a3792047cbc4d5029d629ec321f 142 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 141 5.4E-39 T 19-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 ALIDE2_RS04270 d6b89a3792047cbc4d5029d629ec321f 142 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 19-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site ALIDE2_RS04270 d6b89a3792047cbc4d5029d629ec321f 142 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 142 24.281 T 19-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 ALIDE2_RS13660 12d868760b0f45b583e7394d72984254 222 Pfam PF04191 Phospholipid methyltransferase 124 194 4.0E-9 T 19-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 ALIDE2_RS13660 12d868760b0f45b583e7394d72984254 222 PANTHER PTHR12714:SF11 8 212 9.6E-20 T 19-04-2016 ALIDE2_RS13660 12d868760b0f45b583e7394d72984254 222 PANTHER PTHR12714 8 212 9.6E-20 T 19-04-2016 ALIDE2_RS18535 4688d15708ce00727eff6a93c46adc97 253 Gene3D G3DSA:3.40.50.150 14 245 3.9E-49 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS18535 4688d15708ce00727eff6a93c46adc97 253 SUPERFAMILY SSF53335 22 245 3.45E-33 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS07710 e2e8a72f66b481a82c3a160aa484679d 351 PRINTS PR00184 Neisseria sp. porin signature 296 320 1.9E-5 T 19-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 ALIDE2_RS07710 e2e8a72f66b481a82c3a160aa484679d 351 PRINTS PR00184 Neisseria sp. porin signature 54 79 1.9E-5 T 19-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 ALIDE2_RS07710 e2e8a72f66b481a82c3a160aa484679d 351 PRINTS PR00184 Neisseria sp. porin signature 147 164 1.9E-5 T 19-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 ALIDE2_RS07710 e2e8a72f66b481a82c3a160aa484679d 351 SUPERFAMILY SSF56935 22 351 2.96E-72 T 19-04-2016 ALIDE2_RS07710 e2e8a72f66b481a82c3a160aa484679d 351 Pfam PF13609 Gram-negative porin 14 324 2.0E-48 T 19-04-2016 ALIDE2_RS07710 e2e8a72f66b481a82c3a160aa484679d 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.7E-5 T 19-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 ALIDE2_RS07710 e2e8a72f66b481a82c3a160aa484679d 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 299 316 1.7E-5 T 19-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 ALIDE2_RS07710 e2e8a72f66b481a82c3a160aa484679d 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 201 213 1.7E-5 T 19-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 ALIDE2_RS07710 e2e8a72f66b481a82c3a160aa484679d 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 162 173 1.7E-5 T 19-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 ALIDE2_RS07710 e2e8a72f66b481a82c3a160aa484679d 351 Gene3D G3DSA:2.40.160.10 22 351 3.7E-79 T 19-04-2016 IPR023614 Porin domain ALIDE2_RS10610 2479d6228b6f50d41538d289b8aef535 1252 Gene3D G3DSA:3.30.1330.60 1070 1115 1.1E-10 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS10610 2479d6228b6f50d41538d289b8aef535 1252 Gene3D G3DSA:3.30.1330.60 1197 1228 1.1E-10 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS10610 2479d6228b6f50d41538d289b8aef535 1252 Pfam PF00691 OmpA family 1075 1119 1.3E-4 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS10610 2479d6228b6f50d41538d289b8aef535 1252 Pfam PF05359 Domain of Unknown Function (DUF748) 369 505 8.6E-14 T 19-04-2016 IPR008023 Protein of unknown function DUF748 ALIDE2_RS10610 2479d6228b6f50d41538d289b8aef535 1252 Pfam PF05359 Domain of Unknown Function (DUF748) 598 770 1.3E-18 T 19-04-2016 IPR008023 Protein of unknown function DUF748 ALIDE2_RS10610 2479d6228b6f50d41538d289b8aef535 1252 Pfam PF05359 Domain of Unknown Function (DUF748) 156 308 3.3E-22 T 19-04-2016 IPR008023 Protein of unknown function DUF748 ALIDE2_RS10610 2479d6228b6f50d41538d289b8aef535 1252 Pfam PF05359 Domain of Unknown Function (DUF748) 855 1003 2.1E-34 T 19-04-2016 IPR008023 Protein of unknown function DUF748 ALIDE2_RS10610 2479d6228b6f50d41538d289b8aef535 1252 SUPERFAMILY SSF103088 1070 1118 1.14E-5 T 19-04-2016 IPR006665 OmpA-like domain ALIDE2_RS13980 54e6afd50e27705cc9baded871cce16d 805 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 676 755 3.3E-19 T 19-04-2016 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN ALIDE2_RS13980 54e6afd50e27705cc9baded871cce16d 805 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 420 581 2.7E-28 T 19-04-2016 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN ALIDE2_RS20430 188d3cf24099a75c49a4e2b1243a65dc 116 Pfam PF12779 YXWGXW repeat (2 copies) 62 85 1.8E-5 T 19-04-2016 IPR024447 YXWGXW repeat ALIDE2_RS11140 8b1b3904c3a5abb278433d5243217e0d 457 Pfam PF16325 Peptidase family U32 C-terminal domain 375 453 8.0E-21 T 19-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS11140 8b1b3904c3a5abb278433d5243217e0d 457 ProSitePatterns PS01276 Peptidase family U32 signature. 164 182 - T 19-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS11140 8b1b3904c3a5abb278433d5243217e0d 457 Pfam PF01136 Peptidase family U32 79 359 8.3E-96 T 19-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS11140 8b1b3904c3a5abb278433d5243217e0d 457 PANTHER PTHR30217:SF6 1 208 1.2E-193 T 19-04-2016 ALIDE2_RS11140 8b1b3904c3a5abb278433d5243217e0d 457 PANTHER PTHR30217:SF6 262 447 1.2E-193 T 19-04-2016 ALIDE2_RS11140 8b1b3904c3a5abb278433d5243217e0d 457 PANTHER PTHR30217 1 208 1.2E-193 T 19-04-2016 ALIDE2_RS11140 8b1b3904c3a5abb278433d5243217e0d 457 PANTHER PTHR30217 262 447 1.2E-193 T 19-04-2016 ALIDE2_RS10435 f9e2804ab91f444b82d5df8589abfb46 152 Pfam PF05425 Copper resistance protein D 47 150 2.3E-15 T 19-04-2016 IPR008457 Copper resistance protein D GO:0016021 ALIDE2_RS19185 acb6531c399d536732fa7b729cdd51b1 102 PANTHER PTHR21496 1 100 4.9E-21 T 19-04-2016 ALIDE2_RS19185 acb6531c399d536732fa7b729cdd51b1 102 Pfam PF00355 Rieske [2Fe-2S] domain 4 83 2.3E-17 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ALIDE2_RS19185 acb6531c399d536732fa7b729cdd51b1 102 SUPERFAMILY SSF50022 1 101 3.67E-30 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ALIDE2_RS19185 acb6531c399d536732fa7b729cdd51b1 102 Gene3D G3DSA:2.102.10.10 1 101 4.7E-33 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ALIDE2_RS09150 cdb74d57ed6b609f49e4af0e030d5725 210 Gene3D G3DSA:1.10.357.10 68 207 5.7E-32 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS09150 cdb74d57ed6b609f49e4af0e030d5725 210 PANTHER PTHR30055:SF56 6 185 1.1E-27 T 19-04-2016 ALIDE2_RS09150 cdb74d57ed6b609f49e4af0e030d5725 210 SUPERFAMILY SSF48498 93 206 8.45E-16 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS09150 cdb74d57ed6b609f49e4af0e030d5725 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 67 3.8E-17 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS09150 cdb74d57ed6b609f49e4af0e030d5725 210 SUPERFAMILY SSF46689 14 88 1.9E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS09150 cdb74d57ed6b609f49e4af0e030d5725 210 Gene3D G3DSA:1.10.10.60 15 67 1.1E-21 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS09150 cdb74d57ed6b609f49e4af0e030d5725 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 8.96E-9 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS09150 cdb74d57ed6b609f49e4af0e030d5725 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 8.96E-9 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ALIDE2_RS09150 cdb74d57ed6b609f49e4af0e030d5725 210 PANTHER PTHR30055 6 185 1.1E-27 T 19-04-2016 ALIDE2_RS17545 02b4d30ae923f7cd93d92ae28389fc32 104 Pfam PF12112 Protein of unknown function (DUF3579) 6 95 3.7E-40 T 19-04-2016 IPR021969 Protein of unknown function DUF3579 ALIDE2_RS09790 167f77dcff85d16b45b18482373dcdfe 154 Pfam PF11663 Toxin with endonuclease activity, of toxin-antitoxin system 8 144 1.1E-58 T 19-04-2016 IPR021679 Toxin endonuclease, YhaV ALIDE2_RS07265 2590339abe57504d2263be0f30386411 417 Pfam PF03631 Virulence factor BrkB 36 283 4.8E-55 T 19-04-2016 IPR017039 Virulence factor BrkB ALIDE2_RS07265 2590339abe57504d2263be0f30386411 417 PANTHER PTHR30213:SF0 29 283 6.1E-67 T 19-04-2016 ALIDE2_RS07265 2590339abe57504d2263be0f30386411 417 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 29 283 1.5E-58 T 19-04-2016 IPR017039 Virulence factor BrkB ALIDE2_RS07265 2590339abe57504d2263be0f30386411 417 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 11 314 21.466 T 19-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial ALIDE2_RS07265 2590339abe57504d2263be0f30386411 417 PANTHER PTHR30213 29 283 6.1E-67 T 19-04-2016 ALIDE2_RS06255 df072404db58f0ea558a257a7b205683 123 PANTHER PTHR40261 36 96 1.7E-16 T 19-04-2016 ALIDE2_RS06255 df072404db58f0ea558a257a7b205683 123 Pfam PF00355 Rieske [2Fe-2S] domain 38 101 6.2E-10 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ALIDE2_RS06255 df072404db58f0ea558a257a7b205683 123 Gene3D G3DSA:2.102.10.10 4 116 5.4E-18 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ALIDE2_RS06255 df072404db58f0ea558a257a7b205683 123 PANTHER PTHR40261:SF2 36 96 1.7E-16 T 19-04-2016 ALIDE2_RS06255 df072404db58f0ea558a257a7b205683 123 SUPERFAMILY SSF50022 8 112 2.1E-22 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ALIDE2_RS12930 a5d50bae3a3b79e7865e3c8a4a63754b 403 Pfam PF05940 NnrS protein 25 397 9.7E-105 T 19-04-2016 IPR010266 NnrS ALIDE2_RS09200 8c6fdf245b38312c229391dc571efb40 316 PANTHER PTHR30349:SF32 3 139 1.8E-39 T 19-04-2016 ALIDE2_RS09200 8c6fdf245b38312c229391dc571efb40 316 PANTHER PTHR30349 3 139 1.8E-39 T 19-04-2016 ALIDE2_RS09200 8c6fdf245b38312c229391dc571efb40 316 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 133 2.3E-22 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS04370 082c348545c1a18dc1ae739d6f843f8e 218 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 34 207 1.1E-13 T 19-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system ALIDE2_RS19410 0235ecbefd76bb455490c1d5cd40158d 449 PANTHER PTHR16943 12 407 2.0E-56 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS19410 0235ecbefd76bb455490c1d5cd40158d 449 SUPERFAMILY SSF103378 9 407 6.28E-76 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS19410 0235ecbefd76bb455490c1d5cd40158d 449 PANTHER PTHR16943:SF8 12 407 2.0E-56 T 19-04-2016 ALIDE2_RS19410 0235ecbefd76bb455490c1d5cd40158d 449 Pfam PF03972 MmgE/PrpD family 12 407 1.4E-74 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 ALIDE2_RS19410 0235ecbefd76bb455490c1d5cd40158d 449 Gene3D G3DSA:3.30.1330.120 254 371 5.5E-11 T 19-04-2016 ALIDE2_RS22705 62cbcec83684381e60e98aa5c5cf6ebe 421 SUPERFAMILY SSF50685 95 421 1.4E-104 T 19-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain ALIDE2_RS22705 62cbcec83684381e60e98aa5c5cf6ebe 421 PANTHER PTHR30124:SF0 145 421 5.1E-104 T 19-04-2016 ALIDE2_RS22705 62cbcec83684381e60e98aa5c5cf6ebe 421 PIRSF PIRSF019422 40 421 7.5E-89 T 19-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A ALIDE2_RS22705 62cbcec83684381e60e98aa5c5cf6ebe 421 PANTHER PTHR30124 145 421 5.1E-104 T 19-04-2016 ALIDE2_RS22705 62cbcec83684381e60e98aa5c5cf6ebe 421 Pfam PF06725 3D domain 347 418 1.2E-21 T 19-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 ALIDE2_RS22705 62cbcec83684381e60e98aa5c5cf6ebe 421 Gene3D G3DSA:2.40.40.10 232 421 9.2E-54 T 19-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain ALIDE2_RS22705 62cbcec83684381e60e98aa5c5cf6ebe 421 Gene3D G3DSA:2.40.40.10 99 219 1.1E-21 T 19-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain ALIDE2_RS22705 62cbcec83684381e60e98aa5c5cf6ebe 421 Pfam PF03562 MltA specific insert domain 113 322 9.5E-55 T 19-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 ALIDE2_RS22705 62cbcec83684381e60e98aa5c5cf6ebe 421 SMART SM00925 183 322 1.6E-66 T 19-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 ALIDE2_RS22395 74060832c06167482f29baeef8ccd5fe 296 SUPERFAMILY SSF51556 23 290 5.51E-68 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS22395 74060832c06167482f29baeef8ccd5fe 296 PANTHER PTHR35563 12 292 3.1E-54 T 19-04-2016 ALIDE2_RS22395 74060832c06167482f29baeef8ccd5fe 296 Gene3D G3DSA:3.20.20.140 9 292 2.2E-85 T 19-04-2016 ALIDE2_RS22395 74060832c06167482f29baeef8ccd5fe 296 PANTHER PTHR35563:SF1 12 292 3.1E-54 T 19-04-2016 ALIDE2_RS22395 74060832c06167482f29baeef8ccd5fe 296 Pfam PF04909 Amidohydrolase 28 290 5.6E-36 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 ALIDE2_RS20980 f931ad94483cf0ffad2a7642a8e137d5 260 SUPERFAMILY SSF117143 92 222 4.84E-38 T 19-04-2016 ALIDE2_RS20980 f931ad94483cf0ffad2a7642a8e137d5 260 PANTHER PTHR30435 1 260 1.5E-122 T 19-04-2016 ALIDE2_RS20980 f931ad94483cf0ffad2a7642a8e137d5 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 143 243 1.3E-32 T 19-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G ALIDE2_RS20980 f931ad94483cf0ffad2a7642a8e137d5 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 2.6E-48 T 19-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G ALIDE2_RS20980 f931ad94483cf0ffad2a7642a8e137d5 260 Pfam PF00460 Flagella basal body rod protein 5 35 7.7E-13 T 19-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ALIDE2_RS20980 f931ad94483cf0ffad2a7642a8e137d5 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 3.9E-27 T 19-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ALIDE2_RS20980 f931ad94483cf0ffad2a7642a8e137d5 260 PANTHER PTHR30435:SF19 1 260 1.5E-122 T 19-04-2016 ALIDE2_RS20980 f931ad94483cf0ffad2a7642a8e137d5 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 1.8E-112 T 19-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 ALIDE2_RS02465 fadba532bce9ca760ca868efca8b8add 106 Pfam PF08895 Domain of unknown function (DUF1840) 1 106 5.7E-34 T 19-04-2016 IPR014991 Protein of unknown function DUF1840 ALIDE2_RS13885 8eaa66e709c1b3fc91b0d27993f831dc 81 SUPERFAMILY SSF47413 13 78 6.76E-17 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS13885 8eaa66e709c1b3fc91b0d27993f831dc 81 Pfam PF13560 Helix-turn-helix domain 16 75 1.0E-11 T 19-04-2016 ALIDE2_RS13885 8eaa66e709c1b3fc91b0d27993f831dc 81 Gene3D G3DSA:1.10.260.40 13 80 1.1E-19 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS13885 8eaa66e709c1b3fc91b0d27993f831dc 81 SMART SM00530 20 75 1.5E-11 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS13885 8eaa66e709c1b3fc91b0d27993f831dc 81 PANTHER PTHR10245 9 81 2.1E-14 T 19-04-2016 ALIDE2_RS03650 998a71b4ee3969f86e0012eccd9619d9 529 Gene3D G3DSA:3.40.50.1820 117 197 1.8E-14 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS03650 998a71b4ee3969f86e0012eccd9619d9 529 Gene3D G3DSA:3.40.50.1820 235 325 1.8E-14 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS03650 998a71b4ee3969f86e0012eccd9619d9 529 SUPERFAMILY SSF53474 128 249 1.96E-12 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS21820 2f9d051869a58914e9d38758945ac83b 421 Pfam PF00999 Sodium/hydrogen exchanger family 25 382 7.4E-20 T 19-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ALIDE2_RS13525 f2df93d04421cf8c0a714f9368518e71 539 PANTHER PTHR10566:SF10 18 532 8.4E-118 T 19-04-2016 ALIDE2_RS13525 f2df93d04421cf8c0a714f9368518e71 539 SUPERFAMILY SSF56112 94 157 9.87E-21 T 19-04-2016 IPR011009 Protein kinase-like domain ALIDE2_RS13525 f2df93d04421cf8c0a714f9368518e71 539 SUPERFAMILY SSF56112 192 310 9.87E-21 T 19-04-2016 IPR011009 Protein kinase-like domain ALIDE2_RS13525 f2df93d04421cf8c0a714f9368518e71 539 Gene3D G3DSA:3.90.1200.10 264 329 4.3E-8 T 19-04-2016 ALIDE2_RS13525 f2df93d04421cf8c0a714f9368518e71 539 Pfam PF03109 ABC1 family 112 229 1.1E-30 T 19-04-2016 IPR004147 UbiB domain ALIDE2_RS13525 f2df93d04421cf8c0a714f9368518e71 539 PANTHER PTHR10566 18 532 8.4E-118 T 19-04-2016 ALIDE2_RS00825 5e71a261440fd153367f26fbb3a68f61 326 SUPERFAMILY SSF53850 112 292 1.25E-17 T 19-04-2016 ALIDE2_RS00825 5e71a261440fd153367f26fbb3a68f61 326 PIRSF PIRSF017082 2 325 5.0E-77 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00825 5e71a261440fd153367f26fbb3a68f61 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 321 1.9E-81 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00825 5e71a261440fd153367f26fbb3a68f61 326 PANTHER PTHR30349:SF16 5 289 6.0E-90 T 19-04-2016 ALIDE2_RS00825 5e71a261440fd153367f26fbb3a68f61 326 PANTHER PTHR30349 5 289 6.0E-90 T 19-04-2016 ALIDE2_RS00955 5837d93c1b9943811f0e9d0c0ae4c59f 149 PANTHER PTHR42641 1 149 1.5E-42 T 19-04-2016 ALIDE2_RS00955 5837d93c1b9943811f0e9d0c0ae4c59f 149 Pfam PF05232 Chlorhexidine efflux transporter 12 73 4.9E-16 T 19-04-2016 IPR007896 Chlorhexidine efflux transporter ALIDE2_RS00955 5837d93c1b9943811f0e9d0c0ae4c59f 149 Pfam PF05232 Chlorhexidine efflux transporter 79 141 1.3E-25 T 19-04-2016 IPR007896 Chlorhexidine efflux transporter ALIDE2_RS00955 5837d93c1b9943811f0e9d0c0ae4c59f 149 PANTHER PTHR42641:SF1 1 149 1.5E-42 T 19-04-2016 ALIDE2_RS18080 7f6777931a616d79a07a3c53e9fe9e26 796 Gene3D G3DSA:3.40.50.300 301 403 4.0E-72 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18080 7f6777931a616d79a07a3c53e9fe9e26 796 Gene3D G3DSA:3.40.50.300 602 693 4.0E-72 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18080 7f6777931a616d79a07a3c53e9fe9e26 796 PANTHER PTHR11070 13 523 3.3E-206 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 ALIDE2_RS18080 7f6777931a616d79a07a3c53e9fe9e26 796 PANTHER PTHR11070 579 785 3.3E-206 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 ALIDE2_RS18080 7f6777931a616d79a07a3c53e9fe9e26 796 Gene3D G3DSA:1.10.10.160 122 194 7.1E-18 T 19-04-2016 IPR013986 DExx box DNA helicase domain ALIDE2_RS18080 7f6777931a616d79a07a3c53e9fe9e26 796 Gene3D G3DSA:3.40.50.300 195 300 4.9E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18080 7f6777931a616d79a07a3c53e9fe9e26 796 Gene3D G3DSA:3.40.50.300 14 118 4.9E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18080 7f6777931a616d79a07a3c53e9fe9e26 796 Gene3D G3DSA:1.10.486.10 573 591 6.5E-45 T 19-04-2016 ALIDE2_RS18080 7f6777931a616d79a07a3c53e9fe9e26 796 Gene3D G3DSA:1.10.486.10 404 527 6.5E-45 T 19-04-2016 ALIDE2_RS18080 7f6777931a616d79a07a3c53e9fe9e26 796 PANTHER PTHR11070:SF7 13 523 3.3E-206 T 19-04-2016 ALIDE2_RS18080 7f6777931a616d79a07a3c53e9fe9e26 796 PANTHER PTHR11070:SF7 579 785 3.3E-206 T 19-04-2016 ALIDE2_RS18080 7f6777931a616d79a07a3c53e9fe9e26 796 Pfam PF13361 UvrD-like helicase C-terminal domain 292 666 3.4E-72 T 19-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ALIDE2_RS18080 7f6777931a616d79a07a3c53e9fe9e26 796 Pfam PF00580 UvrD/REP helicase N-terminal domain 18 286 5.0E-70 T 19-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 ALIDE2_RS18080 7f6777931a616d79a07a3c53e9fe9e26 796 SUPERFAMILY SSF52540 14 527 4.19E-174 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS18080 7f6777931a616d79a07a3c53e9fe9e26 796 SUPERFAMILY SSF52540 603 691 4.19E-174 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS07270 920cc83c9978b9049336626efef689db 674 Pfam PF11981 Domain of unknown function (DUF3482) 528 612 3.3E-10 T 19-04-2016 IPR021871 Protein of unknown function DUF3482 ALIDE2_RS07270 920cc83c9978b9049336626efef689db 674 Pfam PF11067 Protein of unknown function (DUF2868) 194 354 8.6E-23 T 19-04-2016 IPR021296 Protein of unknown function DUF2868 ALIDE2_RS16935 3fec7d1efeeb8a3894691f5d54aa3838 128 SUPERFAMILY SSF52833 5 121 4.27E-31 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS16935 3fec7d1efeeb8a3894691f5d54aa3838 128 PANTHER PTHR30041 5 121 4.5E-31 T 19-04-2016 ALIDE2_RS16935 3fec7d1efeeb8a3894691f5d54aa3838 128 PANTHER PTHR30041:SF3 5 121 4.5E-31 T 19-04-2016 ALIDE2_RS16935 3fec7d1efeeb8a3894691f5d54aa3838 128 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 6 120 6.6E-28 T 19-04-2016 IPR006504 Transcriptional regulator Spx/MgsR ALIDE2_RS16935 3fec7d1efeeb8a3894691f5d54aa3838 128 Gene3D G3DSA:3.40.30.10 6 121 2.3E-40 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS16935 3fec7d1efeeb8a3894691f5d54aa3838 128 Pfam PF03960 ArsC family 9 120 1.2E-12 T 19-04-2016 IPR006660 Arsenate reductase-like ALIDE2_RS00410 f971541ced2b9fac8c96c138c8cac81b 691 ProSitePatterns PS00455 Putative AMP-binding domain signature. 266 277 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS00410 f971541ced2b9fac8c96c138c8cac81b 691 Pfam PF00501 AMP-binding enzyme 94 484 3.0E-40 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS00410 f971541ced2b9fac8c96c138c8cac81b 691 Gene3D G3DSA:3.30.300.30 556 653 5.5E-13 T 19-04-2016 ALIDE2_RS00410 f971541ced2b9fac8c96c138c8cac81b 691 PANTHER PTHR24095:SF46 527 685 2.7E-266 T 19-04-2016 ALIDE2_RS00410 f971541ced2b9fac8c96c138c8cac81b 691 PANTHER PTHR24095:SF46 12 510 2.7E-266 T 19-04-2016 ALIDE2_RS00410 f971541ced2b9fac8c96c138c8cac81b 691 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 12 684 5.2E-211 T 19-04-2016 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16 ALIDE2_RS00410 f971541ced2b9fac8c96c138c8cac81b 691 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 31 84 1.5E-11 T 19-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 ALIDE2_RS00410 f971541ced2b9fac8c96c138c8cac81b 691 PANTHER PTHR24095 527 685 2.7E-266 T 19-04-2016 ALIDE2_RS00410 f971541ced2b9fac8c96c138c8cac81b 691 PANTHER PTHR24095 12 510 2.7E-266 T 19-04-2016 ALIDE2_RS00410 f971541ced2b9fac8c96c138c8cac81b 691 SUPERFAMILY SSF56801 18 678 2.62E-109 T 19-04-2016 ALIDE2_RS00410 f971541ced2b9fac8c96c138c8cac81b 691 Gene3D G3DSA:3.40.50.980 94 271 1.5E-29 T 19-04-2016 ALIDE2_RS00410 f971541ced2b9fac8c96c138c8cac81b 691 Gene3D G3DSA:3.40.50.980 272 411 3.0E-10 T 19-04-2016 ALIDE2_RS19350 687afba40a33a6500d547bc2313f7254 482 Gene3D G3DSA:1.20.210.10 42 475 5.6E-11 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19350 687afba40a33a6500d547bc2313f7254 482 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 41 433 3.6E-17 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS19350 687afba40a33a6500d547bc2313f7254 482 SUPERFAMILY SSF81442 39 472 3.01E-28 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 ALIDE2_RS05455 d3a24bfe69cc75461c6b592e7e6a2b6e 550 SMART SM00257 22 69 6.0E-4 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS05455 d3a24bfe69cc75461c6b592e7e6a2b6e 550 Pfam PF04773 FecR protein 112 211 2.1E-14 T 19-04-2016 IPR006860 FecR protein ALIDE2_RS05455 d3a24bfe69cc75461c6b592e7e6a2b6e 550 Pfam PF01476 LysM domain 23 69 6.8E-5 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS05455 d3a24bfe69cc75461c6b592e7e6a2b6e 550 PIRSF PIRSF029644 1 527 1.8E-110 T 19-04-2016 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 ALIDE2_RS05455 d3a24bfe69cc75461c6b592e7e6a2b6e 550 Gene3D G3DSA:3.10.350.10 23 70 3.2E-4 T 19-04-2016 IPR018392 LysM domain ALIDE2_RS05320 9fec2250ca75f29ab4a706db95a87eb3 189 SUPERFAMILY SSF52016 17 176 3.14E-35 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS05320 9fec2250ca75f29ab4a706db95a87eb3 189 PANTHER PTHR11670 17 181 1.8E-43 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05320 9fec2250ca75f29ab4a706db95a87eb3 189 Pfam PF00694 Aconitase C-terminal domain 65 111 1.4E-14 T 19-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05320 9fec2250ca75f29ab4a706db95a87eb3 189 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 17 176 5.2E-46 T 19-04-2016 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 ALIDE2_RS05320 9fec2250ca75f29ab4a706db95a87eb3 189 Gene3D G3DSA:3.20.19.10 19 145 5.5E-22 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALIDE2_RS05320 9fec2250ca75f29ab4a706db95a87eb3 189 PANTHER PTHR11670:SF41 17 181 1.8E-43 T 19-04-2016 ALIDE2_RS08895 1d5d7ef328d7363dc5350eaf773b204e 239 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 43 237 3.0E-89 T 19-04-2016 IPR022293 Integrating conjugative element protein, PFL4693 ALIDE2_RS13135 852da6aaea85f4e3ee49f2067aab4029 129 SUPERFAMILY SSF161084 4 124 6.15E-25 T 19-04-2016 ALIDE2_RS13135 852da6aaea85f4e3ee49f2067aab4029 129 Gene3D G3DSA:1.20.120.550 6 125 2.9E-14 T 19-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain ALIDE2_RS13135 852da6aaea85f4e3ee49f2067aab4029 129 PANTHER PTHR35371:SF1 1 125 1.1E-24 T 19-04-2016 ALIDE2_RS13135 852da6aaea85f4e3ee49f2067aab4029 129 PANTHER PTHR35371 1 125 1.1E-24 T 19-04-2016 ALIDE2_RS13135 852da6aaea85f4e3ee49f2067aab4029 129 Pfam PF01124 MAPEG family 6 126 1.5E-23 T 19-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein ALIDE2_RS12720 75c6d49c520144c6461bd2ef21857c54 318 PANTHER PTHR32332:SF21 3 315 1.7E-158 T 19-04-2016 ALIDE2_RS12720 75c6d49c520144c6461bd2ef21857c54 318 Gene3D G3DSA:3.20.20.70 10 301 7.1E-42 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS12720 75c6d49c520144c6461bd2ef21857c54 318 PANTHER PTHR32332 3 315 1.7E-158 T 19-04-2016 ALIDE2_RS12720 75c6d49c520144c6461bd2ef21857c54 318 Pfam PF03060 Nitronate monooxygenase 86 304 1.4E-19 T 19-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ALIDE2_RS12720 75c6d49c520144c6461bd2ef21857c54 318 SUPERFAMILY SSF51412 8 306 4.03E-57 T 19-04-2016 ALIDE2_RS14700 32f30138c3a461073a05e3a48e5f4225 144 Pfam PF13441 YMGG-like Gly-zipper 69 108 4.6E-7 T 19-04-2016 IPR027367 YMGG-like Gly-zipper ALIDE2_RS06170 3a8e38a452246196edeed17e22a6a131 173 Pfam PF13689 Domain of unknown function (DUF4154) 29 168 1.1E-31 T 19-04-2016 IPR025293 Protein of unknown function DUF4154 ALIDE2_RS13235 0f9f42dea854f487e759f92dd1de60b4 855 Pfam PF12705 PD-(D/E)XK nuclease superfamily 591 849 9.8E-39 T 19-04-2016 ALIDE2_RS13235 0f9f42dea854f487e759f92dd1de60b4 855 SUPERFAMILY SSF52540 221 558 3.51E-19 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS14620 8a4be471aa21f90a814cebc1cf54a719 212 PANTHER PTHR30625 1 210 3.5E-45 T 19-04-2016 ALIDE2_RS14620 8a4be471aa21f90a814cebc1cf54a719 212 Pfam PF01618 MotA/TolQ/ExbB proton channel family 66 196 3.0E-31 T 19-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 ALIDE2_RS21460 f1fb1bc2ca788228158440da3297aa53 224 PANTHER PTHR19136:SF78 7 206 1.8E-27 T 19-04-2016 ALIDE2_RS21460 f1fb1bc2ca788228158440da3297aa53 224 Pfam PF12804 MobA-like NTP transferase domain 7 177 2.1E-35 T 19-04-2016 IPR025877 MobA-like NTP transferase ALIDE2_RS21460 f1fb1bc2ca788228158440da3297aa53 224 Gene3D G3DSA:3.90.550.10 5 204 2.8E-33 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS21460 f1fb1bc2ca788228158440da3297aa53 224 SUPERFAMILY SSF53448 6 200 1.13E-31 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS21460 f1fb1bc2ca788228158440da3297aa53 224 PANTHER PTHR19136 7 206 1.8E-27 T 19-04-2016 ALIDE2_RS16980 a89c011ee05b8da94ada89150f1f6160 223 PANTHER PTHR34300 15 216 1.2E-105 T 19-04-2016 ALIDE2_RS16980 a89c011ee05b8da94ada89150f1f6160 223 Pfam PF02592 Putative vitamin uptake transporter 45 202 1.5E-35 T 19-04-2016 IPR003744 Protein of unknown function DUF165 ALIDE2_RS16980 a89c011ee05b8da94ada89150f1f6160 223 PANTHER PTHR34300:SF1 15 216 1.2E-105 T 19-04-2016 ALIDE2_RS16980 a89c011ee05b8da94ada89150f1f6160 223 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 16 205 4.3E-54 T 19-04-2016 IPR003744 Protein of unknown function DUF165 ALIDE2_RS12955 f31f9b530e5b80b20297096cd462e76d 411 PANTHER PTHR30508:SF0 146 401 2.6E-22 T 19-04-2016 ALIDE2_RS12955 f31f9b530e5b80b20297096cd462e76d 411 Pfam PF01458 Uncharacterized protein family (UPF0051) 147 368 2.9E-33 T 19-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 ALIDE2_RS12955 f31f9b530e5b80b20297096cd462e76d 411 PANTHER PTHR30508 146 401 2.6E-22 T 19-04-2016 ALIDE2_RS12955 f31f9b530e5b80b20297096cd462e76d 411 SUPERFAMILY SSF101960 10 374 4.84E-42 T 19-04-2016 ALIDE2_RS07845 a84f14a508d69134506e3882ffe16b1d 234 SUPERFAMILY SSF54427 93 226 1.14E-28 T 19-04-2016 IPR032710 NTF2-like domain ALIDE2_RS07845 a84f14a508d69134506e3882ffe16b1d 234 Pfam PF04335 VirB8 protein 23 225 2.0E-69 T 19-04-2016 IPR007430 Bacterial virulence protein VirB8 GO:0016020 ALIDE2_RS10245 e5bbb49ab1d69a7ac5fb2e7d2f1d6fa8 299 Pfam PF13280 WYL domain 122 254 3.3E-15 T 19-04-2016 IPR026881 WYL domain ALIDE2_RS10245 e5bbb49ab1d69a7ac5fb2e7d2f1d6fa8 299 PIRSF PIRSF015558 1 288 1.4E-93 T 19-04-2016 IPR016634 Transcription regulator, DeoR type, predicted ALIDE2_RS16195 d77b444c5f5f099c4bdba13407b2f94b 93 PANTHER PTHR34702:SF1 1 93 1.5E-17 T 19-04-2016 ALIDE2_RS16195 d77b444c5f5f099c4bdba13407b2f94b 93 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 35 86 7.1E-19 T 19-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 ALIDE2_RS16195 d77b444c5f5f099c4bdba13407b2f94b 93 PIRSF PIRSF028784 2 93 1.1E-27 T 19-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 ALIDE2_RS16195 d77b444c5f5f099c4bdba13407b2f94b 93 PANTHER PTHR34702 1 93 1.5E-17 T 19-04-2016 ALIDE2_RS04105 fccd9d0b8aa95f90f99da1ed149e63b9 306 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS04105 fccd9d0b8aa95f90f99da1ed149e63b9 306 PANTHER PTHR24220:SF305 5 225 1.5E-97 T 19-04-2016 ALIDE2_RS04105 fccd9d0b8aa95f90f99da1ed149e63b9 306 PANTHER PTHR24220 5 225 1.5E-97 T 19-04-2016 ALIDE2_RS04105 fccd9d0b8aa95f90f99da1ed149e63b9 306 Gene3D G3DSA:3.40.50.300 3 229 2.0E-70 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04105 fccd9d0b8aa95f90f99da1ed149e63b9 306 SUPERFAMILY SSF52540 4 230 7.56E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04105 fccd9d0b8aa95f90f99da1ed149e63b9 306 SMART SM00382 32 212 2.3E-12 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS04105 fccd9d0b8aa95f90f99da1ed149e63b9 306 Pfam PF00005 ABC transporter 23 165 5.3E-34 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS01680 d712c631731d93457a5ac30c4cb62825 399 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 159 296 3.0E-15 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALIDE2_RS01680 d712c631731d93457a5ac30c4cb62825 399 Gene3D G3DSA:2.40.50.100 222 255 2.1E-16 T 19-04-2016 ALIDE2_RS01680 d712c631731d93457a5ac30c4cb62825 399 Gene3D G3DSA:2.40.50.100 54 87 2.1E-16 T 19-04-2016 ALIDE2_RS01680 d712c631731d93457a5ac30c4cb62825 399 PANTHER PTHR30386:SF6 1 383 3.6E-149 T 19-04-2016 ALIDE2_RS01680 d712c631731d93457a5ac30c4cb62825 399 SUPERFAMILY SSF111369 170 276 9.15E-9 T 19-04-2016 ALIDE2_RS01680 d712c631731d93457a5ac30c4cb62825 399 SUPERFAMILY SSF111369 53 143 1.11E-9 T 19-04-2016 ALIDE2_RS01680 d712c631731d93457a5ac30c4cb62825 399 Pfam PF13533 Biotin-lipoyl like 54 102 2.4E-9 T 19-04-2016 ALIDE2_RS01680 d712c631731d93457a5ac30c4cb62825 399 Gene3D G3DSA:1.20.1600.10 91 189 4.8E-4 T 19-04-2016 ALIDE2_RS01680 d712c631731d93457a5ac30c4cb62825 399 PANTHER PTHR30386 1 383 3.6E-149 T 19-04-2016 ALIDE2_RS03070 4f0b44ce80db59b52f575fd2c319a4ad 133 Pfam PF13633 Prokaryotic N-terminal methylation site 10 35 8.1E-8 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03070 4f0b44ce80db59b52f575fd2c319a4ad 133 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 31 1.7E-5 T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS03070 4f0b44ce80db59b52f575fd2c319a4ad 133 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 19-04-2016 IPR012902 Prokaryotic N-terminal methylation site ALIDE2_RS16845 11adc2aed918eb4ca7bd8c7b69c2be75 113 SUPERFAMILY SSF54913 1 113 2.0E-30 T 19-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta ALIDE2_RS16845 11adc2aed918eb4ca7bd8c7b69c2be75 113 PRINTS PR00340 P-II protein signature 53 76 1.6E-11 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS16845 11adc2aed918eb4ca7bd8c7b69c2be75 113 PRINTS PR00340 P-II protein signature 84 104 1.6E-11 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS16845 11adc2aed918eb4ca7bd8c7b69c2be75 113 PRINTS PR00340 P-II protein signature 2 17 1.6E-11 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS16845 11adc2aed918eb4ca7bd8c7b69c2be75 113 Gene3D G3DSA:3.30.70.120 1 113 5.7E-30 T 19-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ALIDE2_RS16845 11adc2aed918eb4ca7bd8c7b69c2be75 113 SMART SM00938 4 106 1.5E-28 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS16845 11adc2aed918eb4ca7bd8c7b69c2be75 113 Pfam PF00543 Nitrogen regulatory protein P-II 4 106 2.1E-21 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ALIDE2_RS16845 11adc2aed918eb4ca7bd8c7b69c2be75 113 PANTHER PTHR30115 1 113 3.5E-24 T 19-04-2016 ALIDE2_RS01945 ec75d98b4e5ddfa5d51ca67051bf55fa 295 PANTHER PTHR30373 25 295 3.2E-59 T 19-04-2016 ALIDE2_RS01945 ec75d98b4e5ddfa5d51ca67051bf55fa 295 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 38 161 2.5E-34 T 19-04-2016 IPR007621 TPM domain ALIDE2_RS01945 ec75d98b4e5ddfa5d51ca67051bf55fa 295 PANTHER PTHR30373:SF2 25 295 3.2E-59 T 19-04-2016 ALIDE2_RS19925 aba0c701000073be3e5022fa16c69581 222 PANTHER PTHR33269:SF1 1 202 3.1E-51 T 19-04-2016 ALIDE2_RS19925 aba0c701000073be3e5022fa16c69581 222 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 171 9.4E-36 T 19-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 ALIDE2_RS19925 aba0c701000073be3e5022fa16c69581 222 PANTHER PTHR33269 1 202 3.1E-51 T 19-04-2016 ALIDE2_RS01295 8278529345fedb43536443baa9cd4df7 452 PANTHER PTHR12778 39 448 1.8E-84 T 19-04-2016 ALIDE2_RS01295 8278529345fedb43536443baa9cd4df7 452 SUPERFAMILY SSF103473 36 445 8.63E-29 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS01295 8278529345fedb43536443baa9cd4df7 452 Pfam PF07690 Major Facilitator Superfamily 60 402 1.8E-11 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS01295 8278529345fedb43536443baa9cd4df7 452 Gene3D G3DSA:1.20.1250.20 263 444 2.0E-11 T 19-04-2016 ALIDE2_RS01295 8278529345fedb43536443baa9cd4df7 452 Gene3D G3DSA:1.20.1250.20 37 235 2.3E-6 T 19-04-2016 ALIDE2_RS02380 6b02f76e50f4858060395c6fe821367f 329 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 83 323 1.9E-41 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS02380 6b02f76e50f4858060395c6fe821367f 329 PANTHER PTHR11820 8 324 1.1E-137 T 19-04-2016 ALIDE2_RS02380 6b02f76e50f4858060395c6fe821367f 329 Gene3D G3DSA:3.90.850.10 67 309 3.5E-43 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS02380 6b02f76e50f4858060395c6fe821367f 329 SUPERFAMILY SSF56529 77 325 2.49E-60 T 19-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ALIDE2_RS02380 6b02f76e50f4858060395c6fe821367f 329 PANTHER PTHR11820:SF85 8 324 1.1E-137 T 19-04-2016 ALIDE2_RS08835 0b2f5a47b45bea84e4f586089b09f892 404 Pfam PF07690 Major Facilitator Superfamily 14 317 9.7E-12 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS08835 0b2f5a47b45bea84e4f586089b09f892 404 Gene3D G3DSA:1.20.1250.20 12 208 2.3E-12 T 19-04-2016 ALIDE2_RS08835 0b2f5a47b45bea84e4f586089b09f892 404 SUPERFAMILY SSF103473 13 398 4.71E-34 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS08835 0b2f5a47b45bea84e4f586089b09f892 404 Gene3D G3DSA:1.20.1250.20 239 398 1.1E-11 T 19-04-2016 ALIDE2_RS08835 0b2f5a47b45bea84e4f586089b09f892 404 PANTHER PTHR23520 10 399 5.1E-74 T 19-04-2016 ALIDE2_RS08835 0b2f5a47b45bea84e4f586089b09f892 404 PANTHER PTHR23520:SF5 10 399 5.1E-74 T 19-04-2016 ALIDE2_RS09120 9161b6f5b8f727f0ad33657108f88d80 1125 SUPERFAMILY SSF52540 691 722 3.55E-7 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09120 9161b6f5b8f727f0ad33657108f88d80 1125 SUPERFAMILY SSF52540 543 573 3.55E-7 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09120 9161b6f5b8f727f0ad33657108f88d80 1125 SUPERFAMILY SSF52540 990 1078 3.55E-7 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09120 9161b6f5b8f727f0ad33657108f88d80 1125 SUPERFAMILY SSF52540 21 136 3.55E-7 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09120 9161b6f5b8f727f0ad33657108f88d80 1125 Gene3D G3DSA:3.40.1140.10 20 238 4.0E-27 T 19-04-2016 ALIDE2_RS09120 9161b6f5b8f727f0ad33657108f88d80 1125 Pfam PF13555 P-loop containing region of AAA domain 22 82 4.1E-24 T 19-04-2016 ALIDE2_RS09120 9161b6f5b8f727f0ad33657108f88d80 1125 Pfam PF13558 Putative exonuclease SbcCD, C subunit 977 1067 3.0E-21 T 19-04-2016 ALIDE2_RS08685 62870a7e32238cec25547f881b6cd1b2 72 PANTHER PTHR36154 12 71 3.5E-13 T 19-04-2016 ALIDE2_RS08685 62870a7e32238cec25547f881b6cd1b2 72 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 14 64 8.1E-26 T 19-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) ALIDE2_RS09985 c96ee2ed9c95fade1a57cdbf82082a2c 85 SUPERFAMILY SSF46955 25 73 1.22E-7 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS16160 15fdced6465b0c86a36bc42784fba890 103 Pfam PF06305 Protein of unknown function (DUF1049) 22 79 1.6E-14 T 19-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 ALIDE2_RS01725 b7c02775877c7081fd8096a4a8e806a2 211 PANTHER PTHR12277:SF79 31 208 2.3E-24 T 19-04-2016 ALIDE2_RS01725 b7c02775877c7081fd8096a4a8e806a2 211 SUPERFAMILY SSF53474 3 208 2.75E-38 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS01725 b7c02775877c7081fd8096a4a8e806a2 211 Gene3D G3DSA:3.40.50.1820 8 208 1.1E-39 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS01725 b7c02775877c7081fd8096a4a8e806a2 211 PANTHER PTHR12277 31 208 2.3E-24 T 19-04-2016 ALIDE2_RS01725 b7c02775877c7081fd8096a4a8e806a2 211 Pfam PF12146 Serine aminopeptidase, S33 47 139 1.5E-6 T 19-04-2016 IPR022742 Serine aminopeptidase, S33 ALIDE2_RS11425 4b77dc310dc7e981507103dcdd93bf39 427 Pfam PF01425 Amidase 26 411 1.7E-63 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS11425 4b77dc310dc7e981507103dcdd93bf39 427 SUPERFAMILY SSF75304 5 418 2.88E-99 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS11425 4b77dc310dc7e981507103dcdd93bf39 427 Gene3D G3DSA:3.90.1300.10 4 421 5.4E-100 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS11425 4b77dc310dc7e981507103dcdd93bf39 427 PANTHER PTHR11895 6 417 2.2E-86 T 19-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ALIDE2_RS16510 a2c89239de3634339fa033c80fd075b5 354 Pfam PF06067 Domain of unknown function (DUF932) 113 324 2.2E-9 T 19-04-2016 IPR026325 Protein of unknown function DUF932 ALIDE2_RS22805 9ee187193ea7c96ac663487d79d4d0bf 161 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 6 161 34.648 T 19-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 ALIDE2_RS22805 9ee187193ea7c96ac663487d79d4d0bf 161 SUPERFAMILY SSF55040 15 159 4.71E-60 T 19-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 ALIDE2_RS22805 9ee187193ea7c96ac663487d79d4d0bf 161 Pfam PF01967 MoaC family 19 154 1.4E-55 T 19-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 ALIDE2_RS22805 9ee187193ea7c96ac663487d79d4d0bf 161 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 8 156 4.7E-61 T 19-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 ALIDE2_RS22805 9ee187193ea7c96ac663487d79d4d0bf 161 Gene3D G3DSA:3.30.70.640 8 160 1.2E-68 T 19-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 ALIDE2_RS22805 9ee187193ea7c96ac663487d79d4d0bf 161 PANTHER PTHR22960 8 161 3.3E-90 T 19-04-2016 ALIDE2_RS00930 989688b279b59192bbd16d69e31e87b6 425 Gene3D G3DSA:3.40.50.10540 12 237 4.6E-117 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00930 989688b279b59192bbd16d69e31e87b6 425 Gene3D G3DSA:3.40.50.10540 325 425 4.6E-117 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00930 989688b279b59192bbd16d69e31e87b6 425 Gene3D G3DSA:3.30.1540.10 243 324 1.6E-31 T 19-04-2016 ALIDE2_RS00930 989688b279b59192bbd16d69e31e87b6 425 Pfam PF02515 CoA-transferase family III 15 401 1.7E-125 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS00930 989688b279b59192bbd16d69e31e87b6 425 SUPERFAMILY SSF89796 11 425 3.27E-136 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS00930 989688b279b59192bbd16d69e31e87b6 425 PANTHER PTHR24023:SF593 94 412 4.0E-35 T 19-04-2016 ALIDE2_RS00930 989688b279b59192bbd16d69e31e87b6 425 PANTHER PTHR24023 94 412 4.0E-35 T 19-04-2016 ALIDE2_RS20380 34db31b32bcdfc461462e6c200a8a49d 140 SUPERFAMILY SSF54637 7 131 2.04E-29 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS20380 34db31b32bcdfc461462e6c200a8a49d 140 Pfam PF03061 Thioesterase superfamily 47 120 3.8E-13 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS20380 34db31b32bcdfc461462e6c200a8a49d 140 Gene3D G3DSA:3.10.129.10 6 135 2.4E-37 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS20380 34db31b32bcdfc461462e6c200a8a49d 140 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 132 6.2E-21 T 19-04-2016 IPR003736 Phenylacetic acid degradation-related domain ALIDE2_RS20380 34db31b32bcdfc461462e6c200a8a49d 140 PANTHER PTHR12418:SF30 1 134 1.9E-25 T 19-04-2016 ALIDE2_RS20380 34db31b32bcdfc461462e6c200a8a49d 140 PANTHER PTHR12418 1 134 1.9E-25 T 19-04-2016 ALIDE2_RS23750 94e7446165f212ac184e34172f3b7604 153 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 1 153 7.4E-50 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS23750 94e7446165f212ac184e34172f3b7604 153 PANTHER PTHR30349 1 149 5.3E-27 T 19-04-2016 ALIDE2_RS23750 94e7446165f212ac184e34172f3b7604 153 PANTHER PTHR30349:SF16 1 149 5.3E-27 T 19-04-2016 ALIDE2_RS23750 94e7446165f212ac184e34172f3b7604 153 SUPERFAMILY SSF53850 9 123 6.33E-9 T 19-04-2016 ALIDE2_RS06500 fe7a3033b381d88ec7c264ec445cc45c 871 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 827 870 4.2E-13 T 19-04-2016 IPR020011 Motility protein FimV, C-terminal ALIDE2_RS06500 fe7a3033b381d88ec7c264ec445cc45c 871 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 213 284 2.5E-22 T 19-04-2016 IPR020012 Motility protein FimV, N-terminal ALIDE2_RS24105 d4872187b0acf6d19395f3f265ed168d 256 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 119 201 9.8E-14 T 19-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ALIDE2_RS24105 d4872187b0acf6d19395f3f265ed168d 256 Gene3D G3DSA:1.10.150.130 115 207 2.3E-10 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal ALIDE2_RS16975 ea6838e0527d5fc2e30cb1a0eee82ee0 239 SUPERFAMILY SSF52402 8 230 7.72E-50 T 19-04-2016 ALIDE2_RS16975 ea6838e0527d5fc2e30cb1a0eee82ee0 239 Pfam PF06508 Queuosine biosynthesis protein QueC 8 230 1.8E-69 T 19-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 ALIDE2_RS16975 ea6838e0527d5fc2e30cb1a0eee82ee0 239 Gene3D G3DSA:3.40.50.620 7 230 5.8E-70 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS16975 ea6838e0527d5fc2e30cb1a0eee82ee0 239 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 7 235 49.35 T 19-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 ALIDE2_RS16975 ea6838e0527d5fc2e30cb1a0eee82ee0 239 PANTHER PTHR11587:SF3 5 229 2.1E-75 T 19-04-2016 ALIDE2_RS16975 ea6838e0527d5fc2e30cb1a0eee82ee0 239 PANTHER PTHR11587 5 229 2.1E-75 T 19-04-2016 ALIDE2_RS16975 ea6838e0527d5fc2e30cb1a0eee82ee0 239 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 9 223 6.6E-58 T 19-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 ALIDE2_RS16975 ea6838e0527d5fc2e30cb1a0eee82ee0 239 PIRSF PIRSF006293 5 237 2.7E-65 T 19-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 ALIDE2_RS23535 172f59e9958f13bd3258415819c87da5 97 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 69 2.0E-21 T 19-04-2016 IPR002696 Putative membrane protein insertion efficiency factor ALIDE2_RS23535 172f59e9958f13bd3258415819c87da5 97 SMART SM01234 2 69 3.4E-40 T 19-04-2016 IPR002696 Putative membrane protein insertion efficiency factor ALIDE2_RS23535 172f59e9958f13bd3258415819c87da5 97 PANTHER PTHR33383 1 70 2.4E-34 T 19-04-2016 ALIDE2_RS23535 172f59e9958f13bd3258415819c87da5 97 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 2 70 23.053 T 19-04-2016 IPR002696 Putative membrane protein insertion efficiency factor ALIDE2_RS23535 172f59e9958f13bd3258415819c87da5 97 Pfam PF01809 Haemolytic domain 4 69 1.3E-26 T 19-04-2016 IPR002696 Putative membrane protein insertion efficiency factor ALIDE2_RS23535 172f59e9958f13bd3258415819c87da5 97 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 75 1.7E-26 T 19-04-2016 IPR002696 Putative membrane protein insertion efficiency factor ALIDE2_RS06750 226a37364f2f1276783f1689dc3ff2b8 266 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 255 1.9E-118 T 19-04-2016 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 ALIDE2_RS06750 226a37364f2f1276783f1689dc3ff2b8 266 Gene3D G3DSA:3.20.20.150 1 257 1.2E-93 T 19-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain ALIDE2_RS06750 226a37364f2f1276783f1689dc3ff2b8 266 PANTHER PTHR12110 1 256 2.7E-97 T 19-04-2016 ALIDE2_RS06750 226a37364f2f1276783f1689dc3ff2b8 266 SUPERFAMILY SSF51658 1 256 1.57E-87 T 19-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain ALIDE2_RS06750 226a37364f2f1276783f1689dc3ff2b8 266 PANTHER PTHR12110:SF12 1 256 2.7E-97 T 19-04-2016 ALIDE2_RS06750 226a37364f2f1276783f1689dc3ff2b8 266 Pfam PF01261 Xylose isomerase-like TIM barrel 21 218 3.5E-35 T 19-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain ALIDE2_RS06750 226a37364f2f1276783f1689dc3ff2b8 266 PIRSF PIRSF006241 1 261 1.0E-96 T 19-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 ALIDE2_RS20800 d2a4a043ef9054703749254fd2e15e49 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.0E-29 T 19-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 ALIDE2_RS20800 d2a4a043ef9054703749254fd2e15e49 89 PANTHER PTHR34040:SF2 1 89 4.1E-34 T 19-04-2016 ALIDE2_RS20800 d2a4a043ef9054703749254fd2e15e49 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 7.8E-29 T 19-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ALIDE2_RS20800 d2a4a043ef9054703749254fd2e15e49 89 PIRSF PIRSF004669 1 89 5.5E-31 T 19-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ALIDE2_RS20800 d2a4a043ef9054703749254fd2e15e49 89 PANTHER PTHR34040 1 89 4.1E-34 T 19-04-2016 ALIDE2_RS20800 d2a4a043ef9054703749254fd2e15e49 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 7.9E-21 T 19-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ALIDE2_RS20800 d2a4a043ef9054703749254fd2e15e49 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 7.9E-21 T 19-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ALIDE2_RS20800 d2a4a043ef9054703749254fd2e15e49 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 7.9E-21 T 19-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ALIDE2_RS01540 f9047f2732af8d5c5a3ac03186c8133d 243 SMART SM00345 35 93 3.2E-12 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS01540 f9047f2732af8d5c5a3ac03186c8133d 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 32 92 4.8E-16 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS01540 f9047f2732af8d5c5a3ac03186c8133d 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 67 83 3.3E-7 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS01540 f9047f2732af8d5c5a3ac03186c8133d 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 67 3.3E-7 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ALIDE2_RS01540 f9047f2732af8d5c5a3ac03186c8133d 243 SUPERFAMILY SSF48008 101 232 2.3E-9 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS01540 f9047f2732af8d5c5a3ac03186c8133d 243 Pfam PF07729 FCD domain 104 224 1.9E-8 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS01540 f9047f2732af8d5c5a3ac03186c8133d 243 SMART SM00895 103 225 7.2E-4 T 19-04-2016 IPR011711 GntR, C-terminal ALIDE2_RS01540 f9047f2732af8d5c5a3ac03186c8133d 243 Gene3D G3DSA:1.10.10.10 17 93 2.0E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01540 f9047f2732af8d5c5a3ac03186c8133d 243 Gene3D G3DSA:1.20.120.530 97 236 2.8E-10 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal ALIDE2_RS01540 f9047f2732af8d5c5a3ac03186c8133d 243 SUPERFAMILY SSF46785 30 97 6.91E-16 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01540 f9047f2732af8d5c5a3ac03186c8133d 243 PANTHER PTHR11751 220 238 1.0E-12 T 19-04-2016 ALIDE2_RS01540 f9047f2732af8d5c5a3ac03186c8133d 243 PANTHER PTHR11751 39 100 1.0E-12 T 19-04-2016 ALIDE2_RS07130 7560a0a698550265e97902a82ab54774 321 Gene3D G3DSA:2.130.10.10 17 315 6.6E-48 T 19-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ALIDE2_RS07130 7560a0a698550265e97902a82ab54774 321 Pfam PF02239 Cytochrome D1 heme domain 191 298 1.5E-7 T 19-04-2016 ALIDE2_RS07130 7560a0a698550265e97902a82ab54774 321 PANTHER PTHR13833 133 314 3.5E-15 T 19-04-2016 ALIDE2_RS07130 7560a0a698550265e97902a82ab54774 321 SUPERFAMILY SSF50974 10 315 8.11E-74 T 19-04-2016 IPR011045 Nitrous oxide reductase, N-terminal ALIDE2_RS07850 b2748ba2213e8b4ec30272ed5d00fcce 461 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 37 256 1.1E-49 T 19-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 ALIDE2_RS07850 b2748ba2213e8b4ec30272ed5d00fcce 461 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 1 304 7.5E-64 T 19-04-2016 IPR014150 Conjugal transfer, TrbL ALIDE2_RS16655 7170a0fbdb72ff253e94231caba3af92 923 Pfam PF07916 TraG-like protein, N-terminal region 3 467 1.2E-100 T 19-04-2016 IPR012931 TraG-like, N-terminal ALIDE2_RS19010 333137fc599fecbcecf8a488d07227c6 182 PRINTS PR00624 Histone H5 signature 60 77 3.9E-5 T 19-04-2016 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 ALIDE2_RS19010 333137fc599fecbcecf8a488d07227c6 182 PRINTS PR00624 Histone H5 signature 82 101 3.9E-5 T 19-04-2016 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 ALIDE2_RS19010 333137fc599fecbcecf8a488d07227c6 182 PRINTS PR00624 Histone H5 signature 29 43 3.9E-5 T 19-04-2016 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 ALIDE2_RS22830 19a26f6bc337b3c1920795d691a4fe84 227 Pfam PF03741 Integral membrane protein TerC family 15 184 3.5E-46 T 19-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 ALIDE2_RS22830 19a26f6bc337b3c1920795d691a4fe84 227 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 13 186 4.6E-68 T 19-04-2016 IPR022301 Integral membrane protein YjbE ALIDE2_RS22830 19a26f6bc337b3c1920795d691a4fe84 227 PANTHER PTHR30060 1 227 3.0E-40 T 19-04-2016 ALIDE2_RS05155 6da5de13915ce77cd0a02039254f75e7 191 Gene3D G3DSA:3.40.1350.10 70 187 6.0E-11 T 19-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 ALIDE2_RS05155 6da5de13915ce77cd0a02039254f75e7 191 Pfam PF04471 Restriction endonuclease 77 183 7.6E-17 T 19-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 ALIDE2_RS05155 6da5de13915ce77cd0a02039254f75e7 191 SUPERFAMILY SSF52980 80 185 5.09E-9 T 19-04-2016 IPR011335 Restriction endonuclease type II-like ALIDE2_RS08935 d5850adbce1961e8c10f8f9cdee78366 596 Pfam PF10592 AIPR protein 241 498 1.7E-39 T 19-04-2016 IPR018891 Abortive bacteriophage infection, resistance ALIDE2_RS17880 bd0d92e063ba2a0c7355b90308665350 397 Gene3D G3DSA:3.30.1540.10 224 301 1.3E-24 T 19-04-2016 ALIDE2_RS17880 bd0d92e063ba2a0c7355b90308665350 397 SUPERFAMILY SSF89796 4 396 1.96E-122 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS17880 bd0d92e063ba2a0c7355b90308665350 397 PANTHER PTHR24023:SF593 26 383 2.0E-27 T 19-04-2016 ALIDE2_RS17880 bd0d92e063ba2a0c7355b90308665350 397 Gene3D G3DSA:3.40.50.10540 5 212 9.6E-98 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS17880 bd0d92e063ba2a0c7355b90308665350 397 Gene3D G3DSA:3.40.50.10540 302 396 9.6E-98 T 19-04-2016 IPR023606 CoA-transferase family III domain ALIDE2_RS17880 bd0d92e063ba2a0c7355b90308665350 397 Pfam PF02515 CoA-transferase family III 8 373 7.0E-116 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 ALIDE2_RS17880 bd0d92e063ba2a0c7355b90308665350 397 PANTHER PTHR24023 26 383 2.0E-27 T 19-04-2016 ALIDE2_RS03130 2c9145dbf99e95cb90c655fa338937f3 334 Pfam PF13489 Methyltransferase domain 20 175 2.6E-17 T 19-04-2016 ALIDE2_RS03130 2c9145dbf99e95cb90c655fa338937f3 334 PANTHER PTHR10108 322 330 2.3E-12 T 19-04-2016 ALIDE2_RS03130 2c9145dbf99e95cb90c655fa338937f3 334 PANTHER PTHR10108 18 135 2.3E-12 T 19-04-2016 ALIDE2_RS03130 2c9145dbf99e95cb90c655fa338937f3 334 SUPERFAMILY SSF53335 16 199 8.28E-32 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS03130 2c9145dbf99e95cb90c655fa338937f3 334 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 32 59 - T 19-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 ALIDE2_RS03130 2c9145dbf99e95cb90c655fa338937f3 334 Gene3D G3DSA:3.40.50.150 15 185 2.9E-30 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS03130 2c9145dbf99e95cb90c655fa338937f3 334 PANTHER PTHR10108:SF739 322 330 2.3E-12 T 19-04-2016 ALIDE2_RS03130 2c9145dbf99e95cb90c655fa338937f3 334 PANTHER PTHR10108:SF739 18 135 2.3E-12 T 19-04-2016 ALIDE2_RS18670 4137251b85c083591b6942257cf50ad6 204 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.6E-23 T 19-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component ALIDE2_RS18670 4137251b85c083591b6942257cf50ad6 204 PANTHER PTHR35011 1 166 1.1E-44 T 19-04-2016 ALIDE2_RS18670 4137251b85c083591b6942257cf50ad6 204 PANTHER PTHR35011:SF4 1 166 1.1E-44 T 19-04-2016 ALIDE2_RS16685 233552bd2ac4b85c4a7e70bd0da58155 281 PIRSF PIRSF028756 1 281 1.9E-104 T 19-04-2016 IPR016898 Polyphosphate kinase 2 ALIDE2_RS16685 233552bd2ac4b85c4a7e70bd0da58155 281 SUPERFAMILY SSF52540 61 249 8.63E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16685 233552bd2ac4b85c4a7e70bd0da58155 281 PANTHER PTHR34383 30 252 4.3E-113 T 19-04-2016 ALIDE2_RS16685 233552bd2ac4b85c4a7e70bd0da58155 281 PANTHER PTHR34383:SF1 30 252 4.3E-113 T 19-04-2016 ALIDE2_RS16685 233552bd2ac4b85c4a7e70bd0da58155 281 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 31 257 1.7E-106 T 19-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 ALIDE2_RS16685 233552bd2ac4b85c4a7e70bd0da58155 281 Gene3D G3DSA:3.40.50.300 20 261 1.9E-93 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16685 233552bd2ac4b85c4a7e70bd0da58155 281 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 30 256 1.9E-94 T 19-04-2016 IPR022488 Polyphosphate kinase-2-related ALIDE2_RS16215 1a9ca51b4698cfe45df7a350aa76680a 287 PANTHER PTHR31223 109 286 5.3E-65 T 19-04-2016 ALIDE2_RS16215 1a9ca51b4698cfe45df7a350aa76680a 287 SUPERFAMILY SSF102405 115 282 4.43E-53 T 19-04-2016 ALIDE2_RS16215 1a9ca51b4698cfe45df7a350aa76680a 287 SUPERFAMILY SSF102405 41 86 4.43E-53 T 19-04-2016 ALIDE2_RS16215 1a9ca51b4698cfe45df7a350aa76680a 287 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 141 279 1.9E-31 T 19-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG ALIDE2_RS16215 1a9ca51b4698cfe45df7a350aa76680a 287 PANTHER PTHR31223:SF1 109 286 5.3E-65 T 19-04-2016 ALIDE2_RS16215 1a9ca51b4698cfe45df7a350aa76680a 287 Pfam PF03641 Possible lysine decarboxylase 151 279 9.9E-35 T 19-04-2016 IPR031100 LOG family ALIDE2_RS16215 1a9ca51b4698cfe45df7a350aa76680a 287 Gene3D G3DSA:3.40.50.450 52 286 8.8E-66 T 19-04-2016 ALIDE2_RS16110 a7ada0789d585bd6b59e36545409fc5b 262 Pfam PF00005 ABC transporter 28 182 3.7E-26 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS16110 a7ada0789d585bd6b59e36545409fc5b 262 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 6.4E-7 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALIDE2_RS16110 a7ada0789d585bd6b59e36545409fc5b 262 SUPERFAMILY SSF52540 10 251 2.66E-55 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16110 a7ada0789d585bd6b59e36545409fc5b 262 PANTHER PTHR24220 12 251 6.7E-87 T 19-04-2016 ALIDE2_RS16110 a7ada0789d585bd6b59e36545409fc5b 262 PANTHER PTHR24220:SF491 12 251 6.7E-87 T 19-04-2016 ALIDE2_RS16110 a7ada0789d585bd6b59e36545409fc5b 262 SMART SM00382 35 229 1.0E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS16110 a7ada0789d585bd6b59e36545409fc5b 262 Gene3D G3DSA:3.40.50.300 9 249 6.8E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22175 0d19275592dac32bd95600ba9f05381a 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 136 8.9E-30 T 19-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS22175 0d19275592dac32bd95600ba9f05381a 139 PANTHER PTHR30558 13 138 7.8E-33 T 19-04-2016 ALIDE2_RS21235 7b49d9acdcc31e18f314527809273a3d 158 SUPERFAMILY SSF52402 3 143 1.67E-33 T 19-04-2016 ALIDE2_RS21235 7b49d9acdcc31e18f314527809273a3d 158 Gene3D G3DSA:3.40.50.620 3 142 5.4E-35 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS21235 7b49d9acdcc31e18f314527809273a3d 158 PRINTS PR01438 Universal stress protein signature 119 141 1.2E-15 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS21235 7b49d9acdcc31e18f314527809273a3d 158 PRINTS PR01438 Universal stress protein signature 101 113 1.2E-15 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS21235 7b49d9acdcc31e18f314527809273a3d 158 PRINTS PR01438 Universal stress protein signature 1 18 1.2E-15 T 19-04-2016 IPR006015 Universal stress protein A ALIDE2_RS21235 7b49d9acdcc31e18f314527809273a3d 158 PANTHER PTHR31964 3 141 4.7E-31 T 19-04-2016 ALIDE2_RS21235 7b49d9acdcc31e18f314527809273a3d 158 Pfam PF00582 Universal stress protein family 3 141 1.9E-27 T 19-04-2016 IPR006016 UspA GO:0006950 ALIDE2_RS10290 f482d7443df092aa8cb000c98b294030 189 Pfam PF00011 Hsp20/alpha crystallin family 85 188 1.1E-27 T 19-04-2016 IPR002068 Alpha crystallin/Hsp20 domain ALIDE2_RS10290 f482d7443df092aa8cb000c98b294030 189 PANTHER PTHR11527 46 189 5.2E-40 T 19-04-2016 IPR031107 Small heat shock protein HSP20 ALIDE2_RS10290 f482d7443df092aa8cb000c98b294030 189 Gene3D G3DSA:2.60.40.790 40 181 1.5E-45 T 19-04-2016 IPR008978 HSP20-like chaperone ALIDE2_RS10290 f482d7443df092aa8cb000c98b294030 189 SUPERFAMILY SSF49764 49 181 1.03E-39 T 19-04-2016 IPR008978 HSP20-like chaperone ALIDE2_RS00815 c681e538afc2b44ab465837090cfac55 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 321 1.0E-81 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00815 c681e538afc2b44ab465837090cfac55 327 PIRSF PIRSF017082 2 327 1.9E-80 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00815 c681e538afc2b44ab465837090cfac55 327 PANTHER PTHR30349:SF16 1 327 1.0E-87 T 19-04-2016 ALIDE2_RS00815 c681e538afc2b44ab465837090cfac55 327 SUPERFAMILY SSF53850 95 285 2.06E-11 T 19-04-2016 ALIDE2_RS00815 c681e538afc2b44ab465837090cfac55 327 PANTHER PTHR30349 1 327 1.0E-87 T 19-04-2016 ALIDE2_RS08700 6ea47d7c7e53b4fa0561da4295be1540 547 SUPERFAMILY SSF110849 37 140 2.09E-10 T 19-04-2016 IPR003115 ParB/Sulfiredoxin ALIDE2_RS08700 6ea47d7c7e53b4fa0561da4295be1540 547 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 28 290 4.0E-120 T 19-04-2016 IPR022304 Integrating conjugative element, PFGI-1, ParB ALIDE2_RS08700 6ea47d7c7e53b4fa0561da4295be1540 547 Gene3D G3DSA:1.10.10.10 166 191 9.6E-4 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08700 6ea47d7c7e53b4fa0561da4295be1540 547 Gene3D G3DSA:3.90.1530.10 37 102 5.9E-7 T 19-04-2016 ALIDE2_RS02920 0536f1c3067483a8c75d2fc79fd9978d 529 SUPERFAMILY SSF56317 243 490 1.83E-32 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ALIDE2_RS02920 0536f1c3067483a8c75d2fc79fd9978d 529 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 15 515 19.554 T 19-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 ALIDE2_RS02920 0536f1c3067483a8c75d2fc79fd9978d 529 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 78 473 2.3E-80 T 19-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 ALIDE2_RS02920 0536f1c3067483a8c75d2fc79fd9978d 529 Gene3D G3DSA:3.60.110.10 244 492 6.5E-20 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ALIDE2_RS02920 0536f1c3067483a8c75d2fc79fd9978d 529 Pfam PF00795 Carbon-nitrogen hydrolase 269 490 1.1E-17 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ALIDE2_RS02920 0536f1c3067483a8c75d2fc79fd9978d 529 PANTHER PTHR38686 9 529 1.0E-57 T 19-04-2016 ALIDE2_RS17020 9cc07c41384dbc90d8d39dfa8feafccb 353 PANTHER PTHR11732:SF112 157 254 1.4E-121 T 19-04-2016 ALIDE2_RS17020 9cc07c41384dbc90d8d39dfa8feafccb 353 PANTHER PTHR11732:SF112 1 139 1.4E-121 T 19-04-2016 ALIDE2_RS17020 9cc07c41384dbc90d8d39dfa8feafccb 353 PANTHER PTHR11732:SF112 270 352 1.4E-121 T 19-04-2016 ALIDE2_RS17020 9cc07c41384dbc90d8d39dfa8feafccb 353 SUPERFAMILY SSF51430 1 348 7.6E-100 T 19-04-2016 IPR023210 NADP-dependent oxidoreductase domain ALIDE2_RS17020 9cc07c41384dbc90d8d39dfa8feafccb 353 Gene3D G3DSA:3.20.20.100 1 346 2.0E-101 T 19-04-2016 IPR023210 NADP-dependent oxidoreductase domain ALIDE2_RS17020 9cc07c41384dbc90d8d39dfa8feafccb 353 Pfam PF00248 Aldo/keto reductase family 15 343 1.1E-71 T 19-04-2016 IPR023210 NADP-dependent oxidoreductase domain ALIDE2_RS17020 9cc07c41384dbc90d8d39dfa8feafccb 353 PANTHER PTHR11732 157 254 1.4E-121 T 19-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta ALIDE2_RS17020 9cc07c41384dbc90d8d39dfa8feafccb 353 PANTHER PTHR11732 1 139 1.4E-121 T 19-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta ALIDE2_RS17020 9cc07c41384dbc90d8d39dfa8feafccb 353 PANTHER PTHR11732 270 352 1.4E-121 T 19-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta ALIDE2_RS11885 80fd648b44de41ef6506955721a957fa 156 Pfam PF13801 Heavy-metal resistance 13 134 1.7E-18 T 19-04-2016 IPR025961 Heavy-metal resistance protein ALIDE2_RS11130 b0d2ea6b68830261242ea3f654b5a0e1 321 PANTHER PTHR39087 1 314 1.1E-28 T 19-04-2016 ALIDE2_RS11130 b0d2ea6b68830261242ea3f654b5a0e1 321 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 7 308 3.8E-44 T 19-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD ALIDE2_RS11130 b0d2ea6b68830261242ea3f654b5a0e1 321 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 14 314 2.4E-21 T 19-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD ALIDE2_RS09035 b7c9c2e5198e930bdf2b739b66921e69 314 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 28 312 1.7E-134 T 19-04-2016 IPR026331 Integrating conjugative element protein PFL_4710 ALIDE2_RS09035 b7c9c2e5198e930bdf2b739b66921e69 314 Pfam PF06834 TraU protein 33 302 1.6E-74 T 19-04-2016 IPR009649 TraU ALIDE2_RS16040 010d9732504703ffff56da82a78140dc 112 SUPERFAMILY SSF52821 4 110 3.14E-23 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS16040 010d9732504703ffff56da82a78140dc 112 SMART SM00450 8 107 3.9E-12 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS16040 010d9732504703ffff56da82a78140dc 112 Gene3D G3DSA:3.40.250.10 2 111 2.2E-24 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS16040 010d9732504703ffff56da82a78140dc 112 Pfam PF00581 Rhodanese-like domain 11 103 2.4E-8 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS17240 b0addb7819cd25d644949038567f25b8 327 Pfam PF02470 MlaD protein 52 115 5.9E-7 T 19-04-2016 IPR003399 Mce/MlaD ALIDE2_RS10865 f301b957fd6b5a728bfdf72df5d14617 665 Pfam PF11843 Protein of unknown function (DUF3363) 291 662 2.3E-141 T 19-04-2016 IPR021795 Protein of unknown function DUF3363 ALIDE2_RS16940 0c2a17734afec424eba64eb9f22918c5 223 Pfam PF05433 Glycine zipper 2TM domain 57 97 3.8E-7 T 19-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 ALIDE2_RS16940 0c2a17734afec424eba64eb9f22918c5 223 PANTHER PTHR35603 24 148 1.6E-21 T 19-04-2016 ALIDE2_RS15800 32925cbf517f3e055ec3236c8f996747 415 ProSitePatterns PS00217 Sugar transport proteins signature 2. 109 134 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ALIDE2_RS15800 32925cbf517f3e055ec3236c8f996747 415 SUPERFAMILY SSF103473 11 409 9.02E-77 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS15800 32925cbf517f3e055ec3236c8f996747 415 Pfam PF07690 Major Facilitator Superfamily 18 277 3.2E-30 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ALIDE2_RS15800 32925cbf517f3e055ec3236c8f996747 415 Gene3D G3DSA:1.20.1250.20 222 412 5.1E-26 T 19-04-2016 ALIDE2_RS15800 32925cbf517f3e055ec3236c8f996747 415 ProSitePatterns PS00216 Sugar transport proteins signature 1. 278 295 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ALIDE2_RS15800 32925cbf517f3e055ec3236c8f996747 415 PANTHER PTHR23508:SF18 2 409 6.8E-168 T 19-04-2016 ALIDE2_RS15800 32925cbf517f3e055ec3236c8f996747 415 PANTHER PTHR23508 2 409 6.8E-168 T 19-04-2016 ALIDE2_RS15800 32925cbf517f3e055ec3236c8f996747 415 Gene3D G3DSA:1.20.1250.20 11 198 1.6E-32 T 19-04-2016 ALIDE2_RS18400 90fdbb6bc90f2bb70cbbb36764ede07b 439 Gene3D G3DSA:3.40.50.150 221 439 3.9E-55 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS18400 90fdbb6bc90f2bb70cbbb36764ede07b 439 Pfam PF01189 16S rRNA methyltransferase RsmB/F 229 435 4.2E-49 T 19-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS18400 90fdbb6bc90f2bb70cbbb36764ede07b 439 Gene3D G3DSA:3.30.70.1170 162 219 7.7E-17 T 19-04-2016 ALIDE2_RS18400 90fdbb6bc90f2bb70cbbb36764ede07b 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 211 225 1.3E-29 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS18400 90fdbb6bc90f2bb70cbbb36764ede07b 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 240 250 1.3E-29 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS18400 90fdbb6bc90f2bb70cbbb36764ede07b 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 309 321 1.3E-29 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS18400 90fdbb6bc90f2bb70cbbb36764ede07b 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 421 438 1.3E-29 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS18400 90fdbb6bc90f2bb70cbbb36764ede07b 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 359 375 1.3E-29 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS18400 90fdbb6bc90f2bb70cbbb36764ede07b 439 PANTHER PTHR22807:SF33 121 438 1.4E-85 T 19-04-2016 ALIDE2_RS18400 90fdbb6bc90f2bb70cbbb36764ede07b 439 SUPERFAMILY SSF53335 130 438 4.96E-70 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS18400 90fdbb6bc90f2bb70cbbb36764ede07b 439 PANTHER PTHR22807 121 438 1.4E-85 T 19-04-2016 ALIDE2_RS18400 90fdbb6bc90f2bb70cbbb36764ede07b 439 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 134 224 5.0E-8 T 19-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ALIDE2_RS14810 732f458d487c56d0ecb8baac523089bc 521 PANTHER PTHR22773:SF67 74 343 1.4E-85 T 19-04-2016 ALIDE2_RS14810 732f458d487c56d0ecb8baac523089bc 521 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 146 167 7.8E-15 T 19-04-2016 ALIDE2_RS14810 732f458d487c56d0ecb8baac523089bc 521 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 71 96 7.8E-15 T 19-04-2016 ALIDE2_RS14810 732f458d487c56d0ecb8baac523089bc 521 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 301 313 7.8E-15 T 19-04-2016 ALIDE2_RS14810 732f458d487c56d0ecb8baac523089bc 521 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 212 233 7.8E-15 T 19-04-2016 ALIDE2_RS14810 732f458d487c56d0ecb8baac523089bc 521 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 234 260 7.8E-15 T 19-04-2016 ALIDE2_RS14810 732f458d487c56d0ecb8baac523089bc 521 Pfam PF00361 Proton-conducting membrane transporter 122 370 1.6E-35 T 19-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 ALIDE2_RS14810 732f458d487c56d0ecb8baac523089bc 521 PANTHER PTHR22773 74 343 1.4E-85 T 19-04-2016 ALIDE2_RS07260 5bababc1d72490aa8e144d4db73e532b 142 Pfam PF09842 Predicted membrane protein (DUF2069) 22 123 1.1E-36 T 19-04-2016 IPR018643 Protein of unknown function DUF2069, membrane ALIDE2_RS16045 25cc3fb7835dcb6513fabdf6aea46fdd 448 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 26 444 5.1E-87 T 19-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 ALIDE2_RS16045 25cc3fb7835dcb6513fabdf6aea46fdd 448 PANTHER PTHR30026:SF3 1 446 4.0E-88 T 19-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 ALIDE2_RS16045 25cc3fb7835dcb6513fabdf6aea46fdd 448 PANTHER PTHR30026 1 446 4.0E-88 T 19-04-2016 ALIDE2_RS16045 25cc3fb7835dcb6513fabdf6aea46fdd 448 SUPERFAMILY SSF56954 6 435 1.44E-88 T 19-04-2016 ALIDE2_RS16045 25cc3fb7835dcb6513fabdf6aea46fdd 448 Gene3D G3DSA:1.20.1600.10 18 437 6.9E-79 T 19-04-2016 ALIDE2_RS16045 25cc3fb7835dcb6513fabdf6aea46fdd 448 Pfam PF02321 Outer membrane efflux protein 243 432 2.0E-27 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS16045 25cc3fb7835dcb6513fabdf6aea46fdd 448 Pfam PF02321 Outer membrane efflux protein 45 219 1.0E-24 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS01375 6e858ad37492f894bc7811b86150f1d7 143 PANTHER PTHR34309:SF1 1 138 2.6E-29 T 19-04-2016 ALIDE2_RS01375 6e858ad37492f894bc7811b86150f1d7 143 SUPERFAMILY SSF143744 5 139 7.06E-38 T 19-04-2016 ALIDE2_RS01375 6e858ad37492f894bc7811b86150f1d7 143 PANTHER PTHR34309 1 138 2.6E-29 T 19-04-2016 ALIDE2_RS01375 6e858ad37492f894bc7811b86150f1d7 143 Pfam PF03928 Haem-degrading 10 135 2.9E-31 T 19-04-2016 IPR005624 Haem-degrading ALIDE2_RS04630 089ff636e1f4a5e6d6c6a4991ee46046 140 SUPERFAMILY SSF54975 1 133 5.89E-40 T 19-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 ALIDE2_RS04630 089ff636e1f4a5e6d6c6a4991ee46046 140 SMART SM01034 2 93 5.1E-47 T 19-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 ALIDE2_RS04630 089ff636e1f4a5e6d6c6a4991ee46046 140 Pfam PF04940 Sensors of blue-light using FAD 2 92 6.4E-29 T 19-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 ALIDE2_RS13260 05a281a180af2c68a5b5bdc36467f059 452 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 405 5.4E-62 T 19-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 ALIDE2_RS13260 05a281a180af2c68a5b5bdc36467f059 452 PANTHER PTHR11206:SF153 14 403 8.6E-72 T 19-04-2016 ALIDE2_RS13260 05a281a180af2c68a5b5bdc36467f059 452 PANTHER PTHR11206 14 403 8.6E-72 T 19-04-2016 ALIDE2_RS13260 05a281a180af2c68a5b5bdc36467f059 452 Pfam PF01554 MatE 239 394 6.8E-25 T 19-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 ALIDE2_RS13260 05a281a180af2c68a5b5bdc36467f059 452 Pfam PF01554 MatE 17 171 2.7E-16 T 19-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 ALIDE2_RS10650 35ea5926f2ad70b799683cb2328d6c3d 127 Gene3D G3DSA:3.40.30.10 16 81 5.3E-14 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS10650 35ea5926f2ad70b799683cb2328d6c3d 127 Pfam PF00085 Thioredoxin 21 80 1.6E-11 T 19-04-2016 IPR013766 Thioredoxin domain GO:0045454 ALIDE2_RS10650 35ea5926f2ad70b799683cb2328d6c3d 127 SUPERFAMILY SSF52833 13 101 1.19E-15 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS17645 fea17f016ecf8b137facb63eff3417e6 264 Pfam PF01614 Bacterial transcriptional regulator 136 259 2.4E-32 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS17645 fea17f016ecf8b137facb63eff3417e6 264 Gene3D G3DSA:3.30.450.40 91 260 1.9E-53 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS17645 fea17f016ecf8b137facb63eff3417e6 264 SUPERFAMILY SSF46785 17 88 3.2E-16 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17645 fea17f016ecf8b137facb63eff3417e6 264 PANTHER PTHR30136 12 258 3.7E-66 T 19-04-2016 ALIDE2_RS17645 fea17f016ecf8b137facb63eff3417e6 264 Pfam PF09339 IclR helix-turn-helix domain 18 69 2.5E-14 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS17645 fea17f016ecf8b137facb63eff3417e6 264 SMART SM00346 16 106 1.5E-27 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS17645 fea17f016ecf8b137facb63eff3417e6 264 Gene3D G3DSA:1.10.10.10 9 87 6.8E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS17645 fea17f016ecf8b137facb63eff3417e6 264 SUPERFAMILY SSF55781 82 259 5.89E-50 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS16830 20280fb66450f00c4e13c5dbbbd5a71e 219 Gene3D G3DSA:3.40.50.150 8 136 1.9E-29 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS16830 20280fb66450f00c4e13c5dbbbd5a71e 219 SUPERFAMILY SSF53335 6 184 1.74E-31 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS16830 20280fb66450f00c4e13c5dbbbd5a71e 219 Pfam PF08241 Methyltransferase domain 39 125 2.0E-21 T 19-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 ALIDE2_RS16830 20280fb66450f00c4e13c5dbbbd5a71e 219 PANTHER PTHR10108 37 142 2.6E-22 T 19-04-2016 ALIDE2_RS22210 29bfedc56c096185de394a3aa0fa9462 115 SUPERFAMILY SSF69754 1 102 2.09E-30 T 19-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 ALIDE2_RS22210 29bfedc56c096185de394a3aa0fa9462 115 Gene3D G3DSA:3.30.160.100 1 100 1.7E-32 T 19-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 ALIDE2_RS22210 29bfedc56c096185de394a3aa0fa9462 115 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 103 8.3E-29 T 19-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 ALIDE2_RS22210 29bfedc56c096185de394a3aa0fa9462 115 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 97 1.7E-23 T 19-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 ALIDE2_RS22210 29bfedc56c096185de394a3aa0fa9462 115 PANTHER PTHR33231 1 100 3.2E-29 T 19-04-2016 ALIDE2_RS09015 08a8fb9925814a377e1b9ca9567605c5 158 SUPERFAMILY SSF46955 9 58 3.78E-6 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS09015 08a8fb9925814a377e1b9ca9567605c5 158 Pfam PF13411 MerR HTH family regulatory protein 9 70 3.4E-5 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS19630 356d5150c9bb7de25ff4f2c7d8356868 251 Gene3D G3DSA:3.40.30.10 87 236 3.6E-5 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS19630 356d5150c9bb7de25ff4f2c7d8356868 251 SUPERFAMILY SSF52833 78 223 3.36E-8 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS22775 b9e56431ee200e463cc9c5ab68c4a93b 245 PANTHER PTHR30060 11 205 3.9E-37 T 19-04-2016 ALIDE2_RS22775 b9e56431ee200e463cc9c5ab68c4a93b 245 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 15 192 2.2E-69 T 19-04-2016 IPR022301 Integral membrane protein YjbE ALIDE2_RS22775 b9e56431ee200e463cc9c5ab68c4a93b 245 Pfam PF03741 Integral membrane protein TerC family 17 191 7.0E-46 T 19-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 ALIDE2_RS17260 ecd5b6054addfc6289f8c183539585b2 208 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 21 196 6.8E-36 T 19-04-2016 IPR003740 Uncharacterised membrane protein YitT ALIDE2_RS17260 ecd5b6054addfc6289f8c183539585b2 208 PANTHER PTHR33545 3 205 4.7E-62 T 19-04-2016 ALIDE2_RS17260 ecd5b6054addfc6289f8c183539585b2 208 PANTHER PTHR33545:SF5 3 205 4.7E-62 T 19-04-2016 ALIDE2_RS18145 911bc6d9c9e6c0e95944f826fde923eb 717 Gene3D G3DSA:2.170.130.10 32 179 5.5E-12 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS18145 911bc6d9c9e6c0e95944f826fde923eb 717 Pfam PF07715 TonB-dependent Receptor Plug Domain 85 176 2.3E-6 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS18145 911bc6d9c9e6c0e95944f826fde923eb 717 SUPERFAMILY SSF56935 32 717 1.53E-78 T 19-04-2016 ALIDE2_RS18145 911bc6d9c9e6c0e95944f826fde923eb 717 Gene3D G3DSA:2.40.170.20 180 717 1.3E-64 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS18145 911bc6d9c9e6c0e95944f826fde923eb 717 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 700 717 - T 19-04-2016 IPR010917 TonB-dependent receptor, conserved site ALIDE2_RS18145 911bc6d9c9e6c0e95944f826fde923eb 717 PANTHER PTHR32552 11 717 1.7E-22 T 19-04-2016 ALIDE2_RS18145 911bc6d9c9e6c0e95944f826fde923eb 717 Pfam PF00593 TonB dependent receptor 452 716 2.3E-26 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS03530 43ce96ad21116a730d4e67fc7a8c6397 365 PRINTS PR01713 Nucleotide sugar epimerase signature 323 340 9.0E-6 T 19-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 ALIDE2_RS03530 43ce96ad21116a730d4e67fc7a8c6397 365 PRINTS PR01713 Nucleotide sugar epimerase signature 254 269 9.0E-6 T 19-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 ALIDE2_RS03530 43ce96ad21116a730d4e67fc7a8c6397 365 PRINTS PR01713 Nucleotide sugar epimerase signature 279 294 9.0E-6 T 19-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 ALIDE2_RS03530 43ce96ad21116a730d4e67fc7a8c6397 365 PRINTS PR01713 Nucleotide sugar epimerase signature 51 67 9.0E-6 T 19-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 ALIDE2_RS03530 43ce96ad21116a730d4e67fc7a8c6397 365 Pfam PF01370 NAD dependent epimerase/dehydratase family 25 285 4.6E-50 T 19-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 ALIDE2_RS03530 43ce96ad21116a730d4e67fc7a8c6397 365 Gene3D G3DSA:3.40.50.720 21 217 4.6E-43 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS03530 43ce96ad21116a730d4e67fc7a8c6397 365 PANTHER PTHR10366:SF472 24 357 4.3E-123 T 19-04-2016 ALIDE2_RS03530 43ce96ad21116a730d4e67fc7a8c6397 365 PANTHER PTHR10366 24 357 4.3E-123 T 19-04-2016 ALIDE2_RS03530 43ce96ad21116a730d4e67fc7a8c6397 365 Gene3D G3DSA:3.90.25.10 218 346 4.9E-32 T 19-04-2016 ALIDE2_RS03530 43ce96ad21116a730d4e67fc7a8c6397 365 SUPERFAMILY SSF51735 21 361 5.37E-81 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21150 6d65b976e53d6a82acdddfe89e41dc4a 393 Gene3D G3DSA:3.40.50.2300 161 311 1.9E-22 T 19-04-2016 ALIDE2_RS21150 6d65b976e53d6a82acdddfe89e41dc4a 393 PANTHER PTHR30483 1 360 3.6E-48 T 19-04-2016 ALIDE2_RS21150 6d65b976e53d6a82acdddfe89e41dc4a 393 SUPERFAMILY SSF53822 35 380 2.29E-64 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS21150 6d65b976e53d6a82acdddfe89e41dc4a 393 Gene3D G3DSA:3.40.50.2300 312 366 1.5E-26 T 19-04-2016 ALIDE2_RS21150 6d65b976e53d6a82acdddfe89e41dc4a 393 Gene3D G3DSA:3.40.50.2300 31 160 1.5E-26 T 19-04-2016 ALIDE2_RS21150 6d65b976e53d6a82acdddfe89e41dc4a 393 Pfam PF13458 Periplasmic binding protein 36 363 8.2E-62 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS19530 3888bc370651fd47764ffbbb6178cd3f 333 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 62 328 7.2E-54 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS19530 3888bc370651fd47764ffbbb6178cd3f 333 PANTHER PTHR30349 17 296 2.6E-55 T 19-04-2016 ALIDE2_RS19530 3888bc370651fd47764ffbbb6178cd3f 333 PIRSF PIRSF017082 8 333 3.5E-63 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS19530 3888bc370651fd47764ffbbb6178cd3f 333 PANTHER PTHR30349:SF1 17 296 2.6E-55 T 19-04-2016 ALIDE2_RS19530 3888bc370651fd47764ffbbb6178cd3f 333 SUPERFAMILY SSF53850 128 294 1.76E-8 T 19-04-2016 ALIDE2_RS02630 7f02f9cf64b4725b712501e1660662d1 272 PIRSF PIRSF006648 1 271 7.6E-31 T 19-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ALIDE2_RS02630 7f02f9cf64b4725b712501e1660662d1 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 194 213 8.4E-21 T 19-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ALIDE2_RS02630 7f02f9cf64b4725b712501e1660662d1 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 38 59 8.4E-21 T 19-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ALIDE2_RS02630 7f02f9cf64b4725b712501e1660662d1 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 214 233 8.4E-21 T 19-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ALIDE2_RS02630 7f02f9cf64b4725b712501e1660662d1 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 157 181 8.4E-21 T 19-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ALIDE2_RS02630 7f02f9cf64b4725b712501e1660662d1 272 Pfam PF01061 ABC-2 type transporter 23 236 1.8E-21 T 19-04-2016 IPR013525 ABC-2 type transporter GO:0016020 ALIDE2_RS02630 7f02f9cf64b4725b712501e1660662d1 272 PANTHER PTHR30413 18 271 5.3E-61 T 19-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ALIDE2_RS02630 7f02f9cf64b4725b712501e1660662d1 272 PANTHER PTHR30413:SF7 18 271 5.3E-61 T 19-04-2016 ALIDE2_RS02765 e0873b0dfcc106c581a32dc803dfbae0 310 PANTHER PTHR11807 20 284 2.3E-111 T 19-04-2016 ALIDE2_RS02765 e0873b0dfcc106c581a32dc803dfbae0 310 Gene3D G3DSA:3.40.50.620 37 218 6.5E-20 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALIDE2_RS02765 e0873b0dfcc106c581a32dc803dfbae0 310 PANTHER PTHR11807:SF16 20 284 2.3E-111 T 19-04-2016 ALIDE2_RS02765 e0873b0dfcc106c581a32dc803dfbae0 310 PIRSF PIRSF004976 11 284 2.4E-73 T 19-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 ALIDE2_RS02765 e0873b0dfcc106c581a32dc803dfbae0 310 Pfam PF01171 PP-loop family 53 215 5.7E-14 T 19-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal ALIDE2_RS02765 e0873b0dfcc106c581a32dc803dfbae0 310 SUPERFAMILY SSF52402 30 246 1.26E-54 T 19-04-2016 ALIDE2_RS02765 e0873b0dfcc106c581a32dc803dfbae0 310 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 21 282 56.096 T 19-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 ALIDE2_RS00285 b7834ec4b8b580bf0f7d8c26a65f30f6 79 Gene3D G3DSA:1.10.150.20 10 46 8.3E-4 T 19-04-2016 ALIDE2_RS07005 a78ecad83a35f6b17d79e039f3a442a9 222 Gene3D G3DSA:1.10.10.10 82 158 2.0E-32 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07005 a78ecad83a35f6b17d79e039f3a442a9 222 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 9 169 5.0E-33 T 19-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ALIDE2_RS07005 a78ecad83a35f6b17d79e039f3a442a9 222 Gene3D G3DSA:1.10.10.10 2 80 2.5E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07005 a78ecad83a35f6b17d79e039f3a442a9 222 SUPERFAMILY SSF46785 1 80 5.29E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07005 a78ecad83a35f6b17d79e039f3a442a9 222 SUPERFAMILY SSF46785 83 158 3.95E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS07005 a78ecad83a35f6b17d79e039f3a442a9 222 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 166 6.7E-49 T 19-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ALIDE2_RS07005 a78ecad83a35f6b17d79e039f3a442a9 222 PANTHER PTHR34298:SF2 1 169 4.5E-59 T 19-04-2016 ALIDE2_RS07005 a78ecad83a35f6b17d79e039f3a442a9 222 PANTHER PTHR34298 1 169 4.5E-59 T 19-04-2016 ALIDE2_RS15365 cb5443b312484645ef6e65e2a6cae47e 131 Pfam PF06073 Bacterial protein of unknown function (DUF934) 20 126 5.3E-36 T 19-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 ALIDE2_RS15365 cb5443b312484645ef6e65e2a6cae47e 131 PIRSF PIRSF030820 5 131 1.1E-33 T 19-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 ALIDE2_RS19870 1f26b5f16fa453fa5b95ccac4077f824 121 PANTHER PTHR34182 5 121 2.5E-24 T 19-04-2016 ALIDE2_RS19870 1f26b5f16fa453fa5b95ccac4077f824 121 Pfam PF03840 Preprotein translocase SecG subunit 7 76 2.5E-21 T 19-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ALIDE2_RS19870 1f26b5f16fa453fa5b95ccac4077f824 121 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 2.3E-36 T 19-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ALIDE2_RS19870 1f26b5f16fa453fa5b95ccac4077f824 121 PRINTS PR01651 Protein-export SecG membrane protein signature 41 57 2.3E-36 T 19-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ALIDE2_RS19870 1f26b5f16fa453fa5b95ccac4077f824 121 PRINTS PR01651 Protein-export SecG membrane protein signature 57 79 2.3E-36 T 19-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ALIDE2_RS19870 1f26b5f16fa453fa5b95ccac4077f824 121 PRINTS PR01651 Protein-export SecG membrane protein signature 26 40 2.3E-36 T 19-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ALIDE2_RS19870 1f26b5f16fa453fa5b95ccac4077f824 121 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 76 4.9E-26 T 19-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ALIDE2_RS10200 cf5ea937df729ace93c762d706f30ddf 166 PANTHER PTHR38107 10 166 3.1E-25 T 19-04-2016 ALIDE2_RS10200 cf5ea937df729ace93c762d706f30ddf 166 Gene3D G3DSA:1.10.530.40 15 164 1.7E-39 T 19-04-2016 IPR023347 Lysozyme domain GO:0003796 ALIDE2_RS10200 cf5ea937df729ace93c762d706f30ddf 166 SUPERFAMILY SSF53955 10 164 1.28E-38 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS10200 cf5ea937df729ace93c762d706f30ddf 166 Pfam PF00959 Phage lysozyme 41 138 3.9E-12 T 19-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 ALIDE2_RS14600 f38d2afa7fc8bab2ca29e4fca9ef41d5 157 Pfam PF02643 Uncharacterized ACR, COG1430 46 147 6.1E-32 T 19-04-2016 IPR003795 Protein of unknown function DUF192 ALIDE2_RS14600 f38d2afa7fc8bab2ca29e4fca9ef41d5 157 PANTHER PTHR37953 31 156 1.9E-29 T 19-04-2016 ALIDE2_RS14600 f38d2afa7fc8bab2ca29e4fca9ef41d5 157 PANTHER PTHR37953:SF1 31 156 1.9E-29 T 19-04-2016 ALIDE2_RS15855 464027d950fbbbae42e787ce71e74c5d 163 SUPERFAMILY SSF53927 4 139 6.69E-38 T 19-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 ALIDE2_RS15855 464027d950fbbbae42e787ce71e74c5d 163 Gene3D G3DSA:3.40.140.10 4 140 1.3E-38 T 19-04-2016 ALIDE2_RS15855 464027d950fbbbae42e787ce71e74c5d 163 PANTHER PTHR11079 1 118 7.7E-27 T 19-04-2016 ALIDE2_RS15855 464027d950fbbbae42e787ce71e74c5d 163 PANTHER PTHR11079 135 145 7.7E-27 T 19-04-2016 ALIDE2_RS15855 464027d950fbbbae42e787ce71e74c5d 163 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 11 108 4.4E-20 T 19-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 ALIDE2_RS15855 464027d950fbbbae42e787ce71e74c5d 163 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 60 97 - T 19-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ALIDE2_RS00340 8b99180da1305b37c37f77a59b3ebe04 474 Gene3D G3DSA:1.10.45.10 432 471 2.5E-16 T 19-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ALIDE2_RS00340 8b99180da1305b37c37f77a59b3ebe04 474 Pfam PF01565 FAD binding domain 57 194 1.5E-40 T 19-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ALIDE2_RS00340 8b99180da1305b37c37f77a59b3ebe04 474 Pfam PF02913 FAD linked oxidases, C-terminal domain 231 471 1.8E-65 T 19-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ALIDE2_RS00340 8b99180da1305b37c37f77a59b3ebe04 474 SUPERFAMILY SSF55103 234 472 1.47E-70 T 19-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ALIDE2_RS00340 8b99180da1305b37c37f77a59b3ebe04 474 Gene3D G3DSA:3.30.43.10 13 112 1.3E-27 T 19-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 ALIDE2_RS00340 8b99180da1305b37c37f77a59b3ebe04 474 SUPERFAMILY SSF56176 15 231 4.25E-70 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ALIDE2_RS00340 8b99180da1305b37c37f77a59b3ebe04 474 PANTHER PTHR11748:SF97 13 472 2.4E-222 T 19-04-2016 ALIDE2_RS00340 8b99180da1305b37c37f77a59b3ebe04 474 Gene3D G3DSA:3.30.465.10 113 231 4.8E-48 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ALIDE2_RS00340 8b99180da1305b37c37f77a59b3ebe04 474 PANTHER PTHR11748 13 472 2.4E-222 T 19-04-2016 ALIDE2_RS00850 a52a6451652841edf9aa692d50eafee4 127 SUPERFAMILY SSF50249 7 114 6.68E-27 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS00850 a52a6451652841edf9aa692d50eafee4 127 PANTHER PTHR34075:SF2 4 119 1.1E-21 T 19-04-2016 ALIDE2_RS00850 a52a6451652841edf9aa692d50eafee4 127 PANTHER PTHR34075 4 119 1.1E-21 T 19-04-2016 ALIDE2_RS00850 a52a6451652841edf9aa692d50eafee4 127 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 47 106 1.4E-14 T 19-04-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal ALIDE2_RS00850 a52a6451652841edf9aa692d50eafee4 127 Gene3D G3DSA:2.20.28.40 19 42 3.7E-4 T 19-04-2016 ALIDE2_RS00850 a52a6451652841edf9aa692d50eafee4 127 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 13 45 4.8E-8 T 19-04-2016 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal ALIDE2_RS00135 2dd360a6d2aea14975646410ce7fbc1a 367 PANTHER PTHR21225 18 366 2.7E-217 T 19-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 ALIDE2_RS00135 2dd360a6d2aea14975646410ce7fbc1a 367 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 20 363 5.7E-155 T 19-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 ALIDE2_RS00135 2dd360a6d2aea14975646410ce7fbc1a 367 SUPERFAMILY SSF51569 21 362 3.3E-133 T 19-04-2016 ALIDE2_RS00135 2dd360a6d2aea14975646410ce7fbc1a 367 PIRSF PIRSF001361 9 366 3.6E-157 T 19-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 ALIDE2_RS00135 2dd360a6d2aea14975646410ce7fbc1a 367 Pfam PF00793 DAHP synthetase I family 58 348 5.2E-103 T 19-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 ALIDE2_RS00135 2dd360a6d2aea14975646410ce7fbc1a 367 Gene3D G3DSA:3.20.20.70 23 364 2.3E-151 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS07215 a0773405630654ae492f9d563452629e 128 Pfam PF01609 Transposase DDE domain 4 121 9.6E-20 T 19-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS07215 a0773405630654ae492f9d563452629e 128 PANTHER PTHR30007 1 126 2.5E-36 T 19-04-2016 ALIDE2_RS07215 a0773405630654ae492f9d563452629e 128 PANTHER PTHR30007:SF22 1 126 2.5E-36 T 19-04-2016 ALIDE2_RS09040 22375ddca866bcbc41ecc4fad301c969 468 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 52 462 2.0E-175 T 19-04-2016 IPR021204 Integrating conjugative element protein, PFL4711 ALIDE2_RS06275 e4f733066f20083d34dabc32082963e5 183 PANTHER PTHR38099 2 179 1.4E-22 T 19-04-2016 ALIDE2_RS06275 e4f733066f20083d34dabc32082963e5 183 Pfam PF02620 Uncharacterized ACR, COG1399 68 176 2.0E-21 T 19-04-2016 IPR003772 Protein of unknown function DUF177 ALIDE2_RS08825 055c6397b05502db6951f1277a332e3d 284 Pfam PF07485 Domain of Unknown Function (DUF1259) 164 278 8.4E-40 T 19-04-2016 IPR011094 Uncharacterised protein family, LppY/LpqO ALIDE2_RS08825 055c6397b05502db6951f1277a332e3d 284 Pfam PF07485 Domain of Unknown Function (DUF1259) 15 134 2.3E-43 T 19-04-2016 IPR011094 Uncharacterised protein family, LppY/LpqO ALIDE2_RS11305 f0e83248c0fd39976b894daf680535aa 307 Gene3D G3DSA:3.40.190.10 195 263 7.2E-9 T 19-04-2016 ALIDE2_RS11305 f0e83248c0fd39976b894daf680535aa 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.8E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11305 f0e83248c0fd39976b894daf680535aa 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.8E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11305 f0e83248c0fd39976b894daf680535aa 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.8E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11305 f0e83248c0fd39976b894daf680535aa 307 PANTHER PTHR30427 4 293 7.6E-50 T 19-04-2016 ALIDE2_RS11305 f0e83248c0fd39976b894daf680535aa 307 SUPERFAMILY SSF53850 96 295 1.5E-28 T 19-04-2016 ALIDE2_RS11305 f0e83248c0fd39976b894daf680535aa 307 SUPERFAMILY SSF46785 3 85 5.6E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11305 f0e83248c0fd39976b894daf680535aa 307 Gene3D G3DSA:3.40.190.10 95 194 2.7E-13 T 19-04-2016 ALIDE2_RS11305 f0e83248c0fd39976b894daf680535aa 307 Gene3D G3DSA:1.10.10.10 2 84 5.8E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS11305 f0e83248c0fd39976b894daf680535aa 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 2.0E-11 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS11305 f0e83248c0fd39976b894daf680535aa 307 Pfam PF03466 LysR substrate binding domain 95 292 8.1E-29 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS09805 5c5b1aa53bfdf9e768e61b3267a24bcf 101 SMART SM00530 28 83 1.5E-11 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS09805 5c5b1aa53bfdf9e768e61b3267a24bcf 101 PANTHER PTHR10245:SF41 1 85 2.4E-17 T 19-04-2016 ALIDE2_RS09805 5c5b1aa53bfdf9e768e61b3267a24bcf 101 Pfam PF01381 Helix-turn-helix 30 81 7.2E-13 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ALIDE2_RS09805 5c5b1aa53bfdf9e768e61b3267a24bcf 101 SUPERFAMILY SSF47413 16 88 1.66E-15 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS09805 5c5b1aa53bfdf9e768e61b3267a24bcf 101 Gene3D G3DSA:1.10.260.40 22 90 7.2E-19 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS09805 5c5b1aa53bfdf9e768e61b3267a24bcf 101 PANTHER PTHR10245 1 85 2.4E-17 T 19-04-2016 ALIDE2_RS20480 e71bdd87113fbd0dcb973fca9d697102 564 Gene3D G3DSA:1.20.1250.20 254 342 9.0E-23 T 19-04-2016 ALIDE2_RS20480 e71bdd87113fbd0dcb973fca9d697102 564 Gene3D G3DSA:1.20.1250.20 23 230 2.8E-23 T 19-04-2016 ALIDE2_RS20480 e71bdd87113fbd0dcb973fca9d697102 564 Gene3D G3DSA:1.20.1250.20 461 557 9.0E-23 T 19-04-2016 ALIDE2_RS20480 e71bdd87113fbd0dcb973fca9d697102 564 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ALIDE2_RS20480 e71bdd87113fbd0dcb973fca9d697102 564 PANTHER PTHR23508 18 344 3.6E-231 T 19-04-2016 ALIDE2_RS20480 e71bdd87113fbd0dcb973fca9d697102 564 PANTHER PTHR23508 463 560 3.6E-231 T 19-04-2016 ALIDE2_RS20480 e71bdd87113fbd0dcb973fca9d697102 564 Pfam PF00083 Sugar (and other) transporter 27 345 3.1E-28 T 19-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ALIDE2_RS20480 e71bdd87113fbd0dcb973fca9d697102 564 PANTHER PTHR23508:SF7 18 344 3.6E-231 T 19-04-2016 ALIDE2_RS20480 e71bdd87113fbd0dcb973fca9d697102 564 PANTHER PTHR23508:SF7 463 560 3.6E-231 T 19-04-2016 ALIDE2_RS20480 e71bdd87113fbd0dcb973fca9d697102 564 SUPERFAMILY SSF103473 465 558 2.44E-58 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS20480 e71bdd87113fbd0dcb973fca9d697102 564 SUPERFAMILY SSF103473 18 343 2.44E-58 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS20875 093d4e7270969c70312fed3355631282 481 PANTHER PTHR30288 4 480 1.3E-63 T 19-04-2016 ALIDE2_RS20875 093d4e7270969c70312fed3355631282 481 Pfam PF07196 Flagellin hook IN motif 147 195 2.0E-9 T 19-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 ALIDE2_RS20875 093d4e7270969c70312fed3355631282 481 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 232 465 1.3E-45 T 19-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 ALIDE2_RS20875 093d4e7270969c70312fed3355631282 481 PANTHER PTHR30288:SF0 4 480 1.3E-63 T 19-04-2016 ALIDE2_RS20875 093d4e7270969c70312fed3355631282 481 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 15 112 1.1E-14 T 19-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 ALIDE2_RS21920 9ae0de2eea8cd3c2252c5d3250fd465b 140 PANTHER PTHR13939 2 138 2.8E-59 T 19-04-2016 ALIDE2_RS21920 9ae0de2eea8cd3c2252c5d3250fd465b 140 SUPERFAMILY SSF142433 1 138 2.35E-52 T 19-04-2016 IPR008136 CinA, C-terminal ALIDE2_RS21920 9ae0de2eea8cd3c2252c5d3250fd465b 140 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 2 135 4.9E-44 T 19-04-2016 IPR008136 CinA, C-terminal ALIDE2_RS21920 9ae0de2eea8cd3c2252c5d3250fd465b 140 Pfam PF02464 Competence-damaged protein 2 137 7.0E-56 T 19-04-2016 IPR008136 CinA, C-terminal ALIDE2_RS21920 9ae0de2eea8cd3c2252c5d3250fd465b 140 Gene3D G3DSA:3.90.950.20 2 138 2.2E-54 T 19-04-2016 IPR008136 CinA, C-terminal ALIDE2_RS06030 17409fc5588e2f470920609de5a122e4 328 SUPERFAMILY SSF53850 120 288 7.06E-10 T 19-04-2016 ALIDE2_RS06030 17409fc5588e2f470920609de5a122e4 328 PIRSF PIRSF017082 1 328 1.5E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS06030 17409fc5588e2f470920609de5a122e4 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 306 5.4E-78 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS06030 17409fc5588e2f470920609de5a122e4 328 PANTHER PTHR30349 5 328 5.7E-92 T 19-04-2016 ALIDE2_RS06030 17409fc5588e2f470920609de5a122e4 328 PANTHER PTHR30349:SF16 5 328 5.7E-92 T 19-04-2016 ALIDE2_RS12115 189e89fd0b1ac566b06b05d87b931af2 329 PIRSF PIRSF017082 1 329 7.8E-71 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS12115 189e89fd0b1ac566b06b05d87b931af2 329 SUPERFAMILY SSF53850 110 291 8.8E-12 T 19-04-2016 ALIDE2_RS12115 189e89fd0b1ac566b06b05d87b931af2 329 PANTHER PTHR30349:SF16 8 327 7.2E-77 T 19-04-2016 ALIDE2_RS12115 189e89fd0b1ac566b06b05d87b931af2 329 PANTHER PTHR30349 8 327 7.2E-77 T 19-04-2016 ALIDE2_RS12115 189e89fd0b1ac566b06b05d87b931af2 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 327 2.2E-68 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS16450 fe981b5eba688f69ec6b3d1a090a1d80 321 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 39 306 2.0E-39 T 19-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system ALIDE2_RS06780 eee743e93513907ca6785b31277ecaae 277 PANTHER PTHR30388 1 272 2.7E-50 T 19-04-2016 ALIDE2_RS06780 eee743e93513907ca6785b31277ecaae 277 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 18 269 6.7E-78 T 19-04-2016 IPR014308 Xanthine dehydrogenase accessory protein XdhC ALIDE2_RS06780 eee743e93513907ca6785b31277ecaae 277 Pfam PF02625 XdhC and CoxI family 14 73 1.3E-12 T 19-04-2016 IPR003777 XdhC- CoxI ALIDE2_RS06780 eee743e93513907ca6785b31277ecaae 277 Pfam PF13478 XdhC Rossmann domain 122 268 2.8E-34 T 19-04-2016 IPR027051 XdhC Rossmann domain ALIDE2_RS06780 eee743e93513907ca6785b31277ecaae 277 PANTHER PTHR30388:SF5 1 272 2.7E-50 T 19-04-2016 ALIDE2_RS03190 57ef6a2f57d70451bb03d467a46ebce7 186 PANTHER PTHR35024 59 184 8.7E-12 T 19-04-2016 ALIDE2_RS03190 57ef6a2f57d70451bb03d467a46ebce7 186 Pfam PF04519 Polymer-forming cytoskeletal 59 154 1.1E-17 T 19-04-2016 IPR007607 Protein of unknown function DUF583 ALIDE2_RS20125 49fbfb31a7f7984ad2d158b35c265ca3 423 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 49 422 39.199 T 19-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 ALIDE2_RS20125 49fbfb31a7f7984ad2d158b35c265ca3 423 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 51 413 1.1E-114 T 19-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 ALIDE2_RS20125 49fbfb31a7f7984ad2d158b35c265ca3 423 PANTHER PTHR30474:SF2 31 416 3.5E-136 T 19-04-2016 ALIDE2_RS20125 49fbfb31a7f7984ad2d158b35c265ca3 423 PANTHER PTHR30474 31 416 3.5E-136 T 19-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 ALIDE2_RS20125 49fbfb31a7f7984ad2d158b35c265ca3 423 Pfam PF01098 Cell cycle protein 53 415 4.3E-100 T 19-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 ALIDE2_RS17035 117a6404c9c326544c0d67df540f15fa 442 PANTHER PTHR30006 128 348 4.3E-51 T 19-04-2016 ALIDE2_RS17035 117a6404c9c326544c0d67df540f15fa 442 Gene3D G3DSA:3.40.190.10 268 317 1.9E-30 T 19-04-2016 ALIDE2_RS17035 117a6404c9c326544c0d67df540f15fa 442 Gene3D G3DSA:3.40.190.10 5 127 1.9E-30 T 19-04-2016 ALIDE2_RS17035 117a6404c9c326544c0d67df540f15fa 442 Pfam PF13343 Bacterial extracellular solute-binding protein 77 284 5.6E-22 T 19-04-2016 ALIDE2_RS17035 117a6404c9c326544c0d67df540f15fa 442 Gene3D G3DSA:3.40.190.10 133 267 7.5E-28 T 19-04-2016 ALIDE2_RS17035 117a6404c9c326544c0d67df540f15fa 442 PANTHER PTHR30006:SF5 128 348 4.3E-51 T 19-04-2016 ALIDE2_RS17035 117a6404c9c326544c0d67df540f15fa 442 SUPERFAMILY SSF53850 22 316 8.51E-52 T 19-04-2016 ALIDE2_RS22040 216e2a8f30f0ebc8f0f2438e2a9cd94b 262 PANTHER PTHR37954 1 259 1.1E-67 T 19-04-2016 ALIDE2_RS22040 216e2a8f30f0ebc8f0f2438e2a9cd94b 262 PANTHER PTHR37954:SF1 1 259 1.1E-67 T 19-04-2016 ALIDE2_RS22040 216e2a8f30f0ebc8f0f2438e2a9cd94b 262 Pfam PF02596 Uncharacterised ArCR, COG2043 17 222 4.0E-33 T 19-04-2016 IPR003748 Protein of unknown function DUF169 ALIDE2_RS08485 1fce434eee60c48ca477189594ed3261 259 SMART SM00346 20 108 6.0E-11 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS08485 1fce434eee60c48ca477189594ed3261 259 Gene3D G3DSA:3.30.450.40 93 251 1.8E-40 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS08485 1fce434eee60c48ca477189594ed3261 259 Pfam PF09339 IclR helix-turn-helix domain 23 69 1.3E-11 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ALIDE2_RS08485 1fce434eee60c48ca477189594ed3261 259 SUPERFAMILY SSF55781 76 256 1.11E-34 T 19-04-2016 IPR029016 GAF domain-like ALIDE2_RS08485 1fce434eee60c48ca477189594ed3261 259 PANTHER PTHR30136:SF14 16 256 1.0E-57 T 19-04-2016 ALIDE2_RS08485 1fce434eee60c48ca477189594ed3261 259 Gene3D G3DSA:1.10.10.10 14 87 1.5E-16 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08485 1fce434eee60c48ca477189594ed3261 259 SUPERFAMILY SSF46785 20 87 1.02E-13 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08485 1fce434eee60c48ca477189594ed3261 259 Pfam PF01614 Bacterial transcriptional regulator 137 253 5.9E-15 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal ALIDE2_RS08485 1fce434eee60c48ca477189594ed3261 259 PANTHER PTHR30136 16 256 1.0E-57 T 19-04-2016 ALIDE2_RS14720 39ee76a73ccc8bafdd017e548acadd2b 167 SUPERFAMILY SSF102712 17 153 7.19E-12 T 19-04-2016 ALIDE2_RS14720 39ee76a73ccc8bafdd017e548acadd2b 167 Gene3D G3DSA:3.40.140.10 21 151 1.8E-7 T 19-04-2016 ALIDE2_RS14720 39ee76a73ccc8bafdd017e548acadd2b 167 Pfam PF14464 Prokaryotic homologs of the JAB domain 22 128 4.8E-11 T 19-04-2016 IPR028090 JAB domain, prokaryotic ALIDE2_RS09700 386db932f4828e3d00c91d8abb821494 320 Pfam PF09828 Chromate resistance exported protein 185 313 9.4E-44 T 19-04-2016 IPR018634 Chromate resistance exported protein ALIDE2_RS03620 597980b93c3ea2520a57bb50a6506d3d 333 SUPERFAMILY SSF53850 118 293 1.9E-11 T 19-04-2016 ALIDE2_RS03620 597980b93c3ea2520a57bb50a6506d3d 333 PANTHER PTHR30349:SF1 10 326 1.2E-70 T 19-04-2016 ALIDE2_RS03620 597980b93c3ea2520a57bb50a6506d3d 333 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 58 329 4.6E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS03620 597980b93c3ea2520a57bb50a6506d3d 333 PIRSF PIRSF017082 6 333 3.1E-69 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS03620 597980b93c3ea2520a57bb50a6506d3d 333 PANTHER PTHR30349 10 326 1.2E-70 T 19-04-2016 ALIDE2_RS24065 f6ce29d72b3b9b55fcb898bd9bd1c7a3 86 Gene3D G3DSA:1.20.140.10 33 85 2.2E-11 T 19-04-2016 ALIDE2_RS24065 f6ce29d72b3b9b55fcb898bd9bd1c7a3 86 SUPERFAMILY SSF47203 3 85 6.47E-7 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS19625 6c5b72dbda7f266304315a10a3ed0303 255 Pfam PF02104 SURF1 family 23 230 3.3E-28 T 19-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 ALIDE2_RS03520 e82b4c3d3d59dbd701353b4ad9083abb 315 Gene3D G3DSA:3.90.550.10 4 225 5.4E-56 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS03520 e82b4c3d3d59dbd701353b4ad9083abb 315 SUPERFAMILY SSF53448 4 229 9.38E-57 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS03520 e82b4c3d3d59dbd701353b4ad9083abb 315 PANTHER PTHR22916 1 290 9.6E-55 T 19-04-2016 ALIDE2_RS03520 e82b4c3d3d59dbd701353b4ad9083abb 315 Pfam PF00535 Glycosyl transferase family 2 7 114 7.3E-28 T 19-04-2016 IPR001173 Glycosyltransferase 2-like ALIDE2_RS19165 27eedd01a0a68f0133ff4f160fac751c 353 Pfam PF05853 beta-keto acid cleavage enzyme 16 320 6.3E-63 T 19-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 ALIDE2_RS19165 27eedd01a0a68f0133ff4f160fac751c 353 PANTHER PTHR37418 131 324 3.8E-27 T 19-04-2016 ALIDE2_RS19165 27eedd01a0a68f0133ff4f160fac751c 353 PANTHER PTHR37418 13 99 3.8E-27 T 19-04-2016 ALIDE2_RS19165 27eedd01a0a68f0133ff4f160fac751c 353 Gene3D G3DSA:3.20.20.70 13 322 4.0E-80 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS16470 0245ed490b5106fec8c2a203a1caa17a 414 Pfam PF06666 Protein of unknown function (DUF1173) 15 398 8.1E-134 T 19-04-2016 IPR009553 Protein of unknown function DUF1173 ALIDE2_RS08160 173708f948563f5eab23e3e5a3e2921f 197 Pfam PF08359 YsiA-like protein, C-terminal region 64 171 7.5E-5 T 19-04-2016 IPR013570 Transcription regulator YsiA, C-terminal ALIDE2_RS08160 173708f948563f5eab23e3e5a3e2921f 197 Gene3D G3DSA:1.10.10.60 3 62 8.2E-13 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS08160 173708f948563f5eab23e3e5a3e2921f 197 Gene3D G3DSA:1.10.357.10 63 196 9.2E-31 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ALIDE2_RS08160 173708f948563f5eab23e3e5a3e2921f 197 PANTHER PTHR30055 1 194 4.6E-22 T 19-04-2016 ALIDE2_RS08160 173708f948563f5eab23e3e5a3e2921f 197 SUPERFAMILY SSF48498 83 196 8.53E-17 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ALIDE2_RS08160 173708f948563f5eab23e3e5a3e2921f 197 SUPERFAMILY SSF46689 2 88 1.28E-13 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 ALIDE2_RS09540 a4eccfd0b81f4f310a5c94e232969beb 719 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 656 3.6E-262 T 19-04-2016 IPR022458 Conjugative coupling factor TraG/TraD ALIDE2_RS09540 a4eccfd0b81f4f310a5c94e232969beb 719 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 656 0.0 T 19-04-2016 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 ALIDE2_RS09540 a4eccfd0b81f4f310a5c94e232969beb 719 SUPERFAMILY SSF52540 398 655 1.59E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09540 a4eccfd0b81f4f310a5c94e232969beb 719 SUPERFAMILY SSF52540 153 331 1.59E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09540 a4eccfd0b81f4f310a5c94e232969beb 719 Pfam PF12696 TraM recognition site of TraD and TraG 508 635 3.0E-9 T 19-04-2016 IPR032689 TraD/TraG, TraM recognition site ALIDE2_RS09540 a4eccfd0b81f4f310a5c94e232969beb 719 Gene3D G3DSA:3.40.50.300 444 657 3.0E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS09540 a4eccfd0b81f4f310a5c94e232969beb 719 Gene3D G3DSA:3.40.50.300 167 267 3.0E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS22420 79cc5ebeb0ef98cb339bf5d46f55e8cf 404 Pfam PF03929 PepSY-associated TM region 8 395 2.6E-47 T 19-04-2016 IPR005625 PepSY-associated TM protein ALIDE2_RS22420 79cc5ebeb0ef98cb339bf5d46f55e8cf 404 PANTHER PTHR34219 1 404 1.6E-76 T 19-04-2016 ALIDE2_RS22420 79cc5ebeb0ef98cb339bf5d46f55e8cf 404 PANTHER PTHR34219:SF1 1 404 1.6E-76 T 19-04-2016 ALIDE2_RS12965 3c8c63bb91410a5444f0782745f6a368 500 SUPERFAMILY SSF101960 54 99 2.09E-132 T 19-04-2016 ALIDE2_RS12965 3c8c63bb91410a5444f0782745f6a368 500 SUPERFAMILY SSF101960 126 497 2.09E-132 T 19-04-2016 ALIDE2_RS12965 3c8c63bb91410a5444f0782745f6a368 500 Pfam PF01458 Uncharacterized protein family (UPF0051) 238 471 6.3E-65 T 19-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 ALIDE2_RS12965 3c8c63bb91410a5444f0782745f6a368 500 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 34 491 3.2E-181 T 19-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 ALIDE2_RS12965 3c8c63bb91410a5444f0782745f6a368 500 PANTHER PTHR30508:SF1 25 500 1.4E-294 T 19-04-2016 ALIDE2_RS12965 3c8c63bb91410a5444f0782745f6a368 500 PANTHER PTHR30508 25 500 1.4E-294 T 19-04-2016 ALIDE2_RS13970 dee5aaaedeb03e588206488de54d2fbb 339 Pfam PF06834 TraU protein 32 337 1.8E-106 T 19-04-2016 IPR009649 TraU ALIDE2_RS09885 4cc190976390f26d3baf70bb84844250 294 Pfam PF02153 Prephenate dehydrogenase 17 265 5.6E-71 T 19-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 ALIDE2_RS09885 4cc190976390f26d3baf70bb84844250 294 Gene3D G3DSA:3.40.50.720 2 181 9.6E-39 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS09885 4cc190976390f26d3baf70bb84844250 294 PANTHER PTHR21363:SF0 6 289 6.3E-66 T 19-04-2016 ALIDE2_RS09885 4cc190976390f26d3baf70bb84844250 294 SUPERFAMILY SSF51735 5 171 4.09E-45 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS09885 4cc190976390f26d3baf70bb84844250 294 SUPERFAMILY SSF48179 175 283 4.53E-30 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ALIDE2_RS09885 4cc190976390f26d3baf70bb84844250 294 PANTHER PTHR21363 6 289 6.3E-66 T 19-04-2016 ALIDE2_RS08885 c50dbeeb456497f754357eaa6c465324 182 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 50 151 4.4E-41 T 19-04-2016 IPR022260 Integrating conjugative element protein PilL, PFGI-1 ALIDE2_RS16235 0cdcf8eb9655f81d57f7c7c7d0ed64ef 470 Pfam PF16980 Putative citrate transport 28 470 7.9E-199 T 19-04-2016 IPR031566 Putative citrate transporter ALIDE2_RS13780 87c85a3215b44d87a9efcd157c6ba411 158 TIGRFAM TIGR03741 PRTRC_E: PRTRC system protein E 3 106 3.9E-32 T 19-04-2016 IPR022273 ParB-related, ThiF-related cassette, protein E ALIDE2_RS12425 9b7ca08205b083341a1e25c12a2a7d40 69 Pfam PF11127 Protein of unknown function (DUF2892) 5 61 3.8E-12 T 19-04-2016 IPR021309 Protein of unknown function DUF2892 ALIDE2_RS09370 0f24f166d4b57696d1cb11b618bdd24e 128 Pfam PF03061 Thioesterase superfamily 36 109 1.1E-10 T 19-04-2016 IPR006683 Thioesterase domain ALIDE2_RS09370 0f24f166d4b57696d1cb11b618bdd24e 128 Gene3D G3DSA:3.10.129.10 3 123 1.1E-27 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS09370 0f24f166d4b57696d1cb11b618bdd24e 128 SUPERFAMILY SSF54637 3 119 1.32E-25 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS09370 0f24f166d4b57696d1cb11b618bdd24e 128 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 5 121 1.7E-15 T 19-04-2016 IPR003736 Phenylacetic acid degradation-related domain ALIDE2_RS09370 0f24f166d4b57696d1cb11b618bdd24e 128 PANTHER PTHR12418 4 111 2.5E-19 T 19-04-2016 ALIDE2_RS18310 511a66f3b405a105375a7b9325ca5102 120 Pfam PF04342 Putative member of DMT superfamily (DUF486) 13 117 2.7E-47 T 19-04-2016 IPR007437 Putative member of DMT superfamily ALIDE2_RS18310 511a66f3b405a105375a7b9325ca5102 120 PIRSF PIRSF021239 7 120 1.6E-55 T 19-04-2016 IPR007437 Putative member of DMT superfamily ALIDE2_RS18310 511a66f3b405a105375a7b9325ca5102 120 PANTHER PTHR38482 5 119 1.6E-58 T 19-04-2016 ALIDE2_RS11365 0a6ac5af7367262a168438ba52937f20 268 Pfam PF14302 Domain of unknown function (DUF4377) 179 263 1.1E-23 T 19-04-2016 IPR025485 Domain of unknown function DUF4377 ALIDE2_RS11365 0a6ac5af7367262a168438ba52937f20 268 Pfam PF03724 META domain 45 155 2.6E-15 T 19-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ ALIDE2_RS04515 a9ef63649199f8cc3f02256a78396e07 300 Pfam PF05013 N-formylglutamate amidohydrolase 24 259 1.2E-62 T 19-04-2016 IPR007709 N-formylglutamate amidohydrolase ALIDE2_RS04515 a9ef63649199f8cc3f02256a78396e07 300 SUPERFAMILY SSF53187 13 290 2.42E-82 T 19-04-2016 ALIDE2_RS04515 a9ef63649199f8cc3f02256a78396e07 300 Gene3D G3DSA:3.40.630.40 10 289 6.3E-95 T 19-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 ALIDE2_RS13545 e7b14ea8df2bc5c8889318d9a64eeb76 220 Pfam PF09335 SNARE associated Golgi protein 48 168 3.1E-8 T 19-04-2016 IPR032816 SNARE associated Golgi protein ALIDE2_RS13870 3da82688d3eb0fa2fd96664edf6e7a11 587 Pfam PF07514 Putative helicase 34 338 4.5E-96 T 19-04-2016 IPR011119 Uncharacterised domain, helicase/relaxase, putative ALIDE2_RS03120 fb09d2dc23dc0445a3c6e0684f20fe45 406 Pfam PF00005 ABC transporter 39 171 1.9E-17 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ALIDE2_RS03120 fb09d2dc23dc0445a3c6e0684f20fe45 406 SUPERFAMILY SSF52540 35 235 5.23E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03120 fb09d2dc23dc0445a3c6e0684f20fe45 406 Pfam PF14524 Wzt C-terminal domain 271 398 3.7E-13 T 19-04-2016 IPR029439 Wzt, C-terminal ALIDE2_RS03120 fb09d2dc23dc0445a3c6e0684f20fe45 406 PANTHER PTHR24220:SF117 4 12 1.6E-82 T 19-04-2016 ALIDE2_RS03120 fb09d2dc23dc0445a3c6e0684f20fe45 406 PANTHER PTHR24220:SF117 35 235 1.6E-82 T 19-04-2016 ALIDE2_RS03120 fb09d2dc23dc0445a3c6e0684f20fe45 406 Gene3D G3DSA:2.70.50.60 271 396 1.7E-7 T 19-04-2016 ALIDE2_RS03120 fb09d2dc23dc0445a3c6e0684f20fe45 406 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ALIDE2_RS03120 fb09d2dc23dc0445a3c6e0684f20fe45 406 SMART SM00382 47 228 4.4E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain ALIDE2_RS03120 fb09d2dc23dc0445a3c6e0684f20fe45 406 Gene3D G3DSA:3.40.50.300 2 235 4.0E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS03120 fb09d2dc23dc0445a3c6e0684f20fe45 406 PANTHER PTHR24220 4 12 1.6E-82 T 19-04-2016 ALIDE2_RS03120 fb09d2dc23dc0445a3c6e0684f20fe45 406 PANTHER PTHR24220 35 235 1.6E-82 T 19-04-2016 ALIDE2_RS24020 2585f400a872801a493c19b75d6e7aa3 118 PANTHER PTHR32552 1 101 3.1E-16 T 19-04-2016 ALIDE2_RS24020 2585f400a872801a493c19b75d6e7aa3 118 PANTHER PTHR32552:SF14 1 101 3.1E-16 T 19-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 ALIDE2_RS24020 2585f400a872801a493c19b75d6e7aa3 118 Gene3D G3DSA:2.40.170.20 1 106 1.5E-4 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS10835 47d8c9c0085a46ecd3f49dae1ea96f8f 93 SUPERFAMILY SSF46955 21 77 1.7E-8 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS10835 47d8c9c0085a46ecd3f49dae1ea96f8f 93 Gene3D G3DSA:1.10.10.10 21 77 2.6E-6 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS10835 47d8c9c0085a46ecd3f49dae1ea96f8f 93 Pfam PF12728 Helix-turn-helix domain 22 71 4.1E-9 T 19-04-2016 ALIDE2_RS11115 0b373f0fbb395b5732911372992beefa 291 Gene3D G3DSA:1.20.5.170 227 285 2.6E-6 T 19-04-2016 ALIDE2_RS22025 ef24a1a37eabe1fb14fd7f4f0aaf372d 310 PANTHER PTHR30537 1 305 7.8E-104 T 19-04-2016 ALIDE2_RS22025 ef24a1a37eabe1fb14fd7f4f0aaf372d 310 Gene3D G3DSA:1.10.10.10 3 84 3.2E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22025 ef24a1a37eabe1fb14fd7f4f0aaf372d 310 SUPERFAMILY SSF46785 4 111 1.77E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22025 ef24a1a37eabe1fb14fd7f4f0aaf372d 310 Gene3D G3DSA:3.40.190.10 92 191 3.2E-26 T 19-04-2016 ALIDE2_RS22025 ef24a1a37eabe1fb14fd7f4f0aaf372d 310 PANTHER PTHR30537:SF5 1 305 7.8E-104 T 19-04-2016 ALIDE2_RS22025 ef24a1a37eabe1fb14fd7f4f0aaf372d 310 Pfam PF03466 LysR substrate binding domain 91 297 5.1E-43 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS22025 ef24a1a37eabe1fb14fd7f4f0aaf372d 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.4E-15 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22025 ef24a1a37eabe1fb14fd7f4f0aaf372d 310 SUPERFAMILY SSF53850 91 301 5.43E-45 T 19-04-2016 ALIDE2_RS03140 a98e7b230739fc8e375c6f7808e3cee6 366 Pfam PF00953 Glycosyl transferase family 4 82 238 2.0E-28 T 19-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS03140 a98e7b230739fc8e375c6f7808e3cee6 366 PANTHER PTHR22926 36 361 3.9E-75 T 19-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 ALIDE2_RS03140 a98e7b230739fc8e375c6f7808e3cee6 366 PANTHER PTHR22926:SF7 36 361 3.9E-75 T 19-04-2016 ALIDE2_RS12650 3f0e8a53f6171ed1b6e6154a66c1ca85 164 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 154 7.6E-29 T 19-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component ALIDE2_RS12650 3f0e8a53f6171ed1b6e6154a66c1ca85 164 PANTHER PTHR35011 13 157 5.8E-19 T 19-04-2016 ALIDE2_RS12905 1515613f3b8882d08e511f483edee5d6 191 PANTHER PTHR30353 1 191 1.0E-49 T 19-04-2016 IPR032818 DedA family ALIDE2_RS12905 1515613f3b8882d08e511f483edee5d6 191 Pfam PF09335 SNARE associated Golgi protein 24 143 2.4E-16 T 19-04-2016 IPR032816 SNARE associated Golgi protein ALIDE2_RS12905 1515613f3b8882d08e511f483edee5d6 191 PANTHER PTHR30353:SF8 1 191 1.0E-49 T 19-04-2016 ALIDE2_RS19590 978db49f1b53654c638a9a1d87abbffc 302 SUPERFAMILY SSF53335 90 229 2.21E-13 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS19590 978db49f1b53654c638a9a1d87abbffc 302 Gene3D G3DSA:3.40.50.150 113 273 5.4E-13 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS19590 978db49f1b53654c638a9a1d87abbffc 302 PANTHER PTHR13090:SF3 115 292 3.3E-16 T 19-04-2016 ALIDE2_RS19590 978db49f1b53654c638a9a1d87abbffc 302 PANTHER PTHR13090 115 292 3.3E-16 T 19-04-2016 ALIDE2_RS06715 38b68cefefaedb19a4dcfedac8feb70b 327 PIRSF PIRSF017082 1 326 5.1E-86 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS06715 38b68cefefaedb19a4dcfedac8feb70b 327 SUPERFAMILY SSF53850 114 290 6.15E-14 T 19-04-2016 ALIDE2_RS06715 38b68cefefaedb19a4dcfedac8feb70b 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 322 3.4E-93 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS06715 38b68cefefaedb19a4dcfedac8feb70b 327 PANTHER PTHR30349:SF32 5 319 2.7E-100 T 19-04-2016 ALIDE2_RS06715 38b68cefefaedb19a4dcfedac8feb70b 327 PANTHER PTHR30349 5 319 2.7E-100 T 19-04-2016 ALIDE2_RS16480 ac5303bc32c60b434b7d26ca39ebbd1d 261 Pfam PF08900 Domain of unknown function (DUF1845) 84 184 5.9E-5 T 19-04-2016 IPR014996 Integrating conjugative element protein, PFL4669 ALIDE2_RS18480 b06d0465dd043836c7806cda076fc90c 321 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 9 319 2.4E-93 T 19-04-2016 IPR016833 Putative sodium bile acid cotransporter ALIDE2_RS18480 b06d0465dd043836c7806cda076fc90c 321 PIRSF PIRSF026166 1 321 1.3E-124 T 19-04-2016 IPR016833 Putative sodium bile acid cotransporter ALIDE2_RS18480 b06d0465dd043836c7806cda076fc90c 321 PANTHER PTHR18640:SF9 3 320 4.8E-102 T 19-04-2016 ALIDE2_RS18480 b06d0465dd043836c7806cda076fc90c 321 PANTHER PTHR18640 3 320 4.8E-102 T 19-04-2016 IPR016833 Putative sodium bile acid cotransporter ALIDE2_RS15275 7723b8f56bd32a2eff60b4a1730db20c 534 Gene3D G3DSA:3.40.50.980 12 182 8.1E-31 T 19-04-2016 ALIDE2_RS15275 7723b8f56bd32a2eff60b4a1730db20c 534 SUPERFAMILY SSF56801 7 521 3.27E-113 T 19-04-2016 ALIDE2_RS15275 7723b8f56bd32a2eff60b4a1730db20c 534 Pfam PF00501 AMP-binding enzyme 18 425 5.6E-74 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS15275 7723b8f56bd32a2eff60b4a1730db20c 534 Gene3D G3DSA:3.30.300.30 420 520 4.8E-20 T 19-04-2016 ALIDE2_RS15275 7723b8f56bd32a2eff60b4a1730db20c 534 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS15275 7723b8f56bd32a2eff60b4a1730db20c 534 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 511 1.5E-8 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS15275 7723b8f56bd32a2eff60b4a1730db20c 534 PANTHER PTHR24096 1 521 3.0E-119 T 19-04-2016 ALIDE2_RS15275 7723b8f56bd32a2eff60b4a1730db20c 534 Gene3D G3DSA:2.30.38.10 347 419 6.6E-17 T 19-04-2016 ALIDE2_RS15275 7723b8f56bd32a2eff60b4a1730db20c 534 Gene3D G3DSA:3.40.50.980 183 326 2.1E-23 T 19-04-2016 ALIDE2_RS15960 99cdf39a9d0d9092ed1762b135e1c080 132 SUPERFAMILY SSF50249 11 123 2.06E-31 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold ALIDE2_RS15960 99cdf39a9d0d9092ed1762b135e1c080 132 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 23 58 1.8E-13 T 19-04-2016 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal ALIDE2_RS15960 99cdf39a9d0d9092ed1762b135e1c080 132 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 60 118 1.7E-15 T 19-04-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal ALIDE2_RS15960 99cdf39a9d0d9092ed1762b135e1c080 132 PANTHER PTHR34075:SF2 22 122 3.7E-26 T 19-04-2016 ALIDE2_RS15960 99cdf39a9d0d9092ed1762b135e1c080 132 PANTHER PTHR34075 22 122 3.7E-26 T 19-04-2016 ALIDE2_RS22560 8132b9466ae905b1529d11e6584a8a9d 168 SUPERFAMILY SSF46785 7 157 1.03E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22560 8132b9466ae905b1529d11e6584a8a9d 168 Pfam PF12802 MarR family 42 103 2.2E-12 T 19-04-2016 ALIDE2_RS22560 8132b9466ae905b1529d11e6584a8a9d 168 PANTHER PTHR33164 11 164 4.8E-22 T 19-04-2016 ALIDE2_RS22560 8132b9466ae905b1529d11e6584a8a9d 168 Gene3D G3DSA:1.10.10.10 4 156 3.1E-37 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22560 8132b9466ae905b1529d11e6584a8a9d 168 ProSitePatterns PS01117 MarR-type HTH domain signature. 78 112 - T 19-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site ALIDE2_RS22560 8132b9466ae905b1529d11e6584a8a9d 168 SMART SM00347 36 140 5.6E-21 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ALIDE2_RS08530 4584639ce56c2b5d95e061c843f8007c 207 Gene3D G3DSA:3.40.50.150 23 200 1.3E-11 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS08530 4584639ce56c2b5d95e061c843f8007c 207 Pfam PF06080 Protein of unknown function (DUF938) 10 202 9.2E-67 T 19-04-2016 IPR010342 Protein of unknown function DUF938 ALIDE2_RS08530 4584639ce56c2b5d95e061c843f8007c 207 PANTHER PTHR20974:SF0 10 203 7.9E-69 T 19-04-2016 ALIDE2_RS08530 4584639ce56c2b5d95e061c843f8007c 207 SUPERFAMILY SSF53335 13 194 6.56E-26 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS08530 4584639ce56c2b5d95e061c843f8007c 207 PANTHER PTHR20974 10 203 7.9E-69 T 19-04-2016 IPR010342 Protein of unknown function DUF938 ALIDE2_RS16645 0caa602f34f4a6a8679a0001ae2bed2e 291 Pfam PF13728 F plasmid transfer operon protein 49 269 1.0E-74 T 19-04-2016 ALIDE2_RS16645 0caa602f34f4a6a8679a0001ae2bed2e 291 SUPERFAMILY SSF52833 176 269 3.75E-14 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS16645 0caa602f34f4a6a8679a0001ae2bed2e 291 Gene3D G3DSA:3.40.30.10 175 268 5.3E-13 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS16645 0caa602f34f4a6a8679a0001ae2bed2e 291 TIGRFAM TIGR02740 TraF-like: TraF-like protein 10 278 2.0E-89 T 19-04-2016 IPR014111 Type IV conjugative transfer system protein TraF ALIDE2_RS11530 760370ad05f8f48a9fd6084073e5204b 451 PANTHER PTHR11689 57 431 1.5E-44 T 19-04-2016 ALIDE2_RS11530 760370ad05f8f48a9fd6084073e5204b 451 PANTHER PTHR11689 8 25 1.5E-44 T 19-04-2016 ALIDE2_RS11530 760370ad05f8f48a9fd6084073e5204b 451 Pfam PF00654 Voltage gated chloride channel 72 417 2.6E-75 T 19-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 ALIDE2_RS11530 760370ad05f8f48a9fd6084073e5204b 451 SUPERFAMILY SSF81340 16 432 7.32E-82 T 19-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 ALIDE2_RS11530 760370ad05f8f48a9fd6084073e5204b 451 PRINTS PR00762 Chloride channel signature 385 404 4.6E-23 T 19-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 ALIDE2_RS11530 760370ad05f8f48a9fd6084073e5204b 451 PRINTS PR00762 Chloride channel signature 367 383 4.6E-23 T 19-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 ALIDE2_RS11530 760370ad05f8f48a9fd6084073e5204b 451 PRINTS PR00762 Chloride channel signature 338 358 4.6E-23 T 19-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 ALIDE2_RS11530 760370ad05f8f48a9fd6084073e5204b 451 PRINTS PR00762 Chloride channel signature 84 101 4.6E-23 T 19-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 ALIDE2_RS11530 760370ad05f8f48a9fd6084073e5204b 451 PRINTS PR00762 Chloride channel signature 171 190 4.6E-23 T 19-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 ALIDE2_RS11530 760370ad05f8f48a9fd6084073e5204b 451 PANTHER PTHR11689:SF14 57 431 1.5E-44 T 19-04-2016 ALIDE2_RS11530 760370ad05f8f48a9fd6084073e5204b 451 PANTHER PTHR11689:SF14 8 25 1.5E-44 T 19-04-2016 ALIDE2_RS11530 760370ad05f8f48a9fd6084073e5204b 451 Gene3D G3DSA:1.10.3080.10 22 436 8.4E-68 T 19-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 ALIDE2_RS07140 f1660772ba055b467958039f7df0209e 328 Pfam PF04116 Fatty acid hydroxylase superfamily 135 282 7.0E-32 T 19-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 ALIDE2_RS01535 a995fd239636162dd1eae0b5f1d9811d 340 PANTHER PTHR21240 11 339 2.6E-67 T 19-04-2016 ALIDE2_RS01535 a995fd239636162dd1eae0b5f1d9811d 340 SUPERFAMILY SSF51556 30 339 1.98E-38 T 19-04-2016 IPR032466 Metal-dependent hydrolase ALIDE2_RS01535 a995fd239636162dd1eae0b5f1d9811d 340 Pfam PF04909 Amidohydrolase 32 339 7.2E-34 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 ALIDE2_RS01535 a995fd239636162dd1eae0b5f1d9811d 340 Gene3D G3DSA:3.20.20.140 25 339 4.2E-43 T 19-04-2016 ALIDE2_RS01535 a995fd239636162dd1eae0b5f1d9811d 340 PANTHER PTHR21240:SF9 11 339 2.6E-67 T 19-04-2016 ALIDE2_RS05305 900323d516d37d167c9086d641c70999 132 Gene3D G3DSA:1.10.490.10 10 132 3.8E-44 T 19-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 ALIDE2_RS05305 900323d516d37d167c9086d641c70999 132 SUPERFAMILY SSF46458 11 132 1.8E-35 T 19-04-2016 IPR009050 Globin-like ALIDE2_RS05305 900323d516d37d167c9086d641c70999 132 PANTHER PTHR10681 2 132 1.3E-14 T 19-04-2016 ALIDE2_RS05305 900323d516d37d167c9086d641c70999 132 Pfam PF01152 Bacterial-like globin 13 131 6.0E-41 T 19-04-2016 IPR001486 Truncated hemoglobin GO:0019825 ALIDE2_RS24035 a45c5d8891caf22a75d732c7fc57227d 89 Pfam PF03929 PepSY-associated TM region 13 62 4.3E-13 T 19-04-2016 IPR005625 PepSY-associated TM protein ALIDE2_RS17720 db5c11641baac7e497c90f9a39401d8c 340 Gene3D G3DSA:2.40.160.10 21 340 1.1E-68 T 19-04-2016 IPR023614 Porin domain ALIDE2_RS17720 db5c11641baac7e497c90f9a39401d8c 340 Pfam PF13609 Gram-negative porin 7 323 5.3E-53 T 19-04-2016 ALIDE2_RS17720 db5c11641baac7e497c90f9a39401d8c 340 SUPERFAMILY SSF56935 21 340 5.76E-66 T 19-04-2016 ALIDE2_RS12615 faa16e3295a525cdc951e98ca7f09618 237 PANTHER PTHR12561 140 178 4.4E-18 T 19-04-2016 ALIDE2_RS12615 faa16e3295a525cdc951e98ca7f09618 237 PANTHER PTHR12561 33 119 4.4E-18 T 19-04-2016 ALIDE2_RS12615 faa16e3295a525cdc951e98ca7f09618 237 PANTHER PTHR12561:SF7 140 178 4.4E-18 T 19-04-2016 ALIDE2_RS12615 faa16e3295a525cdc951e98ca7f09618 237 PANTHER PTHR12561:SF7 33 119 4.4E-18 T 19-04-2016 ALIDE2_RS12615 faa16e3295a525cdc951e98ca7f09618 237 SUPERFAMILY SSF55681 22 227 1.91E-26 T 19-04-2016 ALIDE2_RS12615 faa16e3295a525cdc951e98ca7f09618 237 Gene3D G3DSA:3.90.1550.10 29 191 3.5E-19 T 19-04-2016 ALIDE2_RS08215 0aaa9a9650e24555f03e7f3decf6f6bf 197 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 73 157 7.0E-12 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS08215 0aaa9a9650e24555f03e7f3decf6f6bf 197 PANTHER PTHR35008 37 182 1.8E-13 T 19-04-2016 ALIDE2_RS08215 0aaa9a9650e24555f03e7f3decf6f6bf 197 Gene3D G3DSA:1.10.760.10 76 179 2.4E-29 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS08215 0aaa9a9650e24555f03e7f3decf6f6bf 197 SUPERFAMILY SSF46626 76 179 1.53E-24 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 ALIDE2_RS14775 0f94111f53922330dc47bcda84238203 94 Gene3D G3DSA:1.10.1220.10 47 83 1.4E-6 T 19-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 ALIDE2_RS14775 0f94111f53922330dc47bcda84238203 94 SUPERFAMILY SSF47598 47 88 2.78E-8 T 19-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 ALIDE2_RS22290 ddf64180e38c95df28e0c98a15f3ac17 255 Gene3D G3DSA:3.40.50.1580 1 253 3.8E-65 T 19-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ALIDE2_RS22290 ddf64180e38c95df28e0c98a15f3ac17 255 Pfam PF01048 Phosphorylase superfamily 5 251 5.6E-46 T 19-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ALIDE2_RS22290 ddf64180e38c95df28e0c98a15f3ac17 255 PANTHER PTHR21234 1 254 6.0E-33 T 19-04-2016 IPR018017 Nucleoside phosphorylase ALIDE2_RS22290 ddf64180e38c95df28e0c98a15f3ac17 255 SUPERFAMILY SSF53167 1 252 1.83E-57 T 19-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ALIDE2_RS09055 d638f050f0cc7fd0c67ee104e0bc0e44 124 Pfam PF12553 Protein of unknown function (DUF3742) 1 123 1.9E-49 T 19-04-2016 IPR022213 Protein of unknown function DUF3742 ALIDE2_RS09615 f29f0563c59075d848ba101443ece4c8 401 Pfam PF02687 FtsX-like permease family 286 395 6.9E-14 T 19-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 ALIDE2_RS09615 f29f0563c59075d848ba101443ece4c8 401 PANTHER PTHR30489 1 184 6.8E-34 T 19-04-2016 ALIDE2_RS09615 f29f0563c59075d848ba101443ece4c8 401 PANTHER PTHR30489 219 401 6.8E-34 T 19-04-2016 ALIDE2_RS09615 f29f0563c59075d848ba101443ece4c8 401 Pfam PF12704 MacB-like periplasmic core domain 19 256 2.6E-14 T 19-04-2016 IPR025857 MacB-like periplasmic core domain ALIDE2_RS12345 1f358f272f9db9f333156ab7c602c109 310 PANTHER PTHR10277 1 284 1.6E-92 T 19-04-2016 ALIDE2_RS12345 1f358f272f9db9f333156ab7c602c109 310 Pfam PF00682 HMGL-like 5 279 1.3E-43 T 19-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 ALIDE2_RS12345 1f358f272f9db9f333156ab7c602c109 310 Gene3D G3DSA:3.20.20.70 4 284 9.9E-61 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS12345 1f358f272f9db9f333156ab7c602c109 310 SUPERFAMILY SSF51569 3 282 2.38E-61 T 19-04-2016 ALIDE2_RS12345 1f358f272f9db9f333156ab7c602c109 310 PANTHER PTHR10277:SF1 1 284 1.6E-92 T 19-04-2016 ALIDE2_RS17875 d9be93a29a1929ea7aea8b60d6840828 333 PIRSF PIRSF017082 1 332 1.2E-69 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS17875 d9be93a29a1929ea7aea8b60d6840828 333 SUPERFAMILY SSF53850 56 247 2.14E-7 T 19-04-2016 ALIDE2_RS17875 d9be93a29a1929ea7aea8b60d6840828 333 PANTHER PTHR30349 12 295 4.2E-68 T 19-04-2016 ALIDE2_RS17875 d9be93a29a1929ea7aea8b60d6840828 333 PANTHER PTHR30349:SF1 12 295 4.2E-68 T 19-04-2016 ALIDE2_RS17875 d9be93a29a1929ea7aea8b60d6840828 333 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 58 328 1.8E-80 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS05410 0d3ae61384d854e88e1694984837ef0a 801 Gene3D G3DSA:3.40.50.150 272 483 2.9E-6 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS05410 0d3ae61384d854e88e1694984837ef0a 801 SUPERFAMILY SSF53335 261 403 4.02E-7 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS19725 ece3c19b737ea50aaaf280fe7689ef89 297 Pfam PF08340 Domain of unknown function (DUF1732) 214 297 1.6E-34 T 19-04-2016 IPR013551 Domain of unknown function DUF1732 ALIDE2_RS19725 ece3c19b737ea50aaaf280fe7689ef89 297 Pfam PF03755 YicC-like family, N-terminal region 1 155 1.2E-30 T 19-04-2016 IPR013527 YicC-like, N-terminal ALIDE2_RS19725 ece3c19b737ea50aaaf280fe7689ef89 297 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 25 297 5.0E-62 T 19-04-2016 IPR005229 Conserved hypothetical protein CHP00255 ALIDE2_RS19725 ece3c19b737ea50aaaf280fe7689ef89 297 PANTHER PTHR30636 1 297 3.3E-79 T 19-04-2016 ALIDE2_RS09645 3db64fc0588402e51370245c3b6a3c3d 405 Pfam PF06527 TniQ 8 165 1.6E-23 T 19-04-2016 IPR009492 TniQ ALIDE2_RS09995 57f98089696f7f222ac65c7bffaa78f6 282 Pfam PF13479 AAA domain 18 244 8.4E-46 T 19-04-2016 ALIDE2_RS14230 473765b2cd461198a5a360f79cc3b9f2 561 Pfam PF00916 Sulfate permease family 23 385 3.7E-77 T 19-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 ALIDE2_RS14230 473765b2cd461198a5a360f79cc3b9f2 561 SUPERFAMILY SSF52091 443 552 1.16E-11 T 19-04-2016 IPR002645 STAS domain ALIDE2_RS14230 473765b2cd461198a5a360f79cc3b9f2 561 Pfam PF01740 STAS domain 445 532 4.0E-10 T 19-04-2016 IPR002645 STAS domain ALIDE2_RS14230 473765b2cd461198a5a360f79cc3b9f2 561 Gene3D G3DSA:3.30.750.24 445 553 2.2E-13 T 19-04-2016 IPR002645 STAS domain ALIDE2_RS14230 473765b2cd461198a5a360f79cc3b9f2 561 PANTHER PTHR11814 5 553 2.1E-119 T 19-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 ALIDE2_RS05755 89182319623d45af0757aa4a173a1240 388 Gene3D G3DSA:1.10.540.10 14 125 1.6E-22 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS05755 89182319623d45af0757aa4a173a1240 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 124 6.7E-19 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ALIDE2_RS05755 89182319623d45af0757aa4a173a1240 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 384 1.8E-16 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS05755 89182319623d45af0757aa4a173a1240 388 SUPERFAMILY SSF47203 234 387 2.42E-17 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ALIDE2_RS05755 89182319623d45af0757aa4a173a1240 388 Gene3D G3DSA:2.40.110.10 127 223 6.1E-33 T 19-04-2016 ALIDE2_RS05755 89182319623d45af0757aa4a173a1240 388 PANTHER PTHR10909 14 387 1.8E-116 T 19-04-2016 ALIDE2_RS05755 89182319623d45af0757aa4a173a1240 388 SUPERFAMILY SSF56645 14 245 2.09E-65 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ALIDE2_RS05755 89182319623d45af0757aa4a173a1240 388 PANTHER PTHR10909:SF229 14 387 1.8E-116 T 19-04-2016 ALIDE2_RS05755 89182319623d45af0757aa4a173a1240 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 222 3.5E-20 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ALIDE2_RS05755 89182319623d45af0757aa4a173a1240 388 Gene3D G3DSA:1.20.140.10 224 387 2.8E-24 T 19-04-2016 ALIDE2_RS21865 ee14c7f8bcce536e3f63affdf290227f 1186 Pfam PF05567 Neisseria PilC beta-propeller domain 726 1032 2.9E-49 T 19-04-2016 IPR008707 PilC beta-propeller domain ALIDE2_RS21865 ee14c7f8bcce536e3f63affdf290227f 1186 SUPERFAMILY SSF50998 1090 1137 1.04E-12 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ALIDE2_RS21865 ee14c7f8bcce536e3f63affdf290227f 1186 SUPERFAMILY SSF50998 733 788 1.04E-12 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ALIDE2_RS21865 ee14c7f8bcce536e3f63affdf290227f 1186 SUPERFAMILY SSF50998 817 973 1.04E-12 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ALIDE2_RS21865 ee14c7f8bcce536e3f63affdf290227f 1186 SMART SM00564 756 787 1.6E-5 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ALIDE2_RS21865 ee14c7f8bcce536e3f63affdf290227f 1186 SMART SM00564 878 919 390.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ALIDE2_RS16650 2bc7b2ee5aec94c8c9e579152cfb42c6 482 Pfam PF06122 Conjugative relaxosome accessory transposon protein 37 395 1.2E-97 T 19-04-2016 IPR010927 Type IV conjugative transfer system protein TraH ALIDE2_RS22875 0dd0ecba5ca0c7697e430bbefe2d7144 249 PANTHER PTHR34979 1 242 3.4E-26 T 19-04-2016 ALIDE2_RS22875 0dd0ecba5ca0c7697e430bbefe2d7144 249 Pfam PF03591 AzlC protein 26 166 4.6E-32 T 19-04-2016 IPR011606 Branched-chain amino acid transport, permease ALIDE2_RS01820 e7c96d91148773b5dce52efe914afea9 242 SUPERFAMILY SSF81342 32 208 6.51E-26 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 ALIDE2_RS01820 e7c96d91148773b5dce52efe914afea9 242 Pfam PF01292 Prokaryotic cytochrome b561 33 203 1.8E-11 T 19-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ALIDE2_RS07400 43e12de93e74292791fe2e751303d3c0 305 Pfam PF02653 Branched-chain amino acid transport system / permease component 30 281 1.8E-29 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS07400 43e12de93e74292791fe2e751303d3c0 305 PANTHER PTHR30482 8 300 2.5E-48 T 19-04-2016 ALIDE2_RS12000 9add855368e121ef898a0423901e32a5 131 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 18 128 8.7E-15 T 19-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III ALIDE2_RS07790 fa25e7b5f5c89cd5be399eb456c35cb6 662 Pfam PF13175 AAA ATPase domain 90 301 3.7E-29 T 19-04-2016 ALIDE2_RS07790 fa25e7b5f5c89cd5be399eb456c35cb6 662 Gene3D G3DSA:3.40.50.300 221 301 1.4E-5 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS00510 148a33b8c0cb74333b84ddd282805f59 282 SUPERFAMILY SSF56300 1 124 1.05E-25 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS00510 148a33b8c0cb74333b84ddd282805f59 282 SUPERFAMILY SSF56300 174 262 1.05E-25 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS00510 148a33b8c0cb74333b84ddd282805f59 282 Pfam PF00149 Calcineurin-like phosphoesterase 21 238 1.3E-9 T 19-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 ALIDE2_RS00510 148a33b8c0cb74333b84ddd282805f59 282 Gene3D G3DSA:3.60.21.10 1 79 1.4E-11 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS00510 148a33b8c0cb74333b84ddd282805f59 282 Gene3D G3DSA:3.60.21.10 166 242 1.4E-11 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS00510 148a33b8c0cb74333b84ddd282805f59 282 PANTHER PTHR37844 1 265 3.4E-17 T 19-04-2016 ALIDE2_RS13990 95cc58d3af5bf751b7e85740f7c7a2cf 292 TIGRFAM TIGR02740 TraF-like: TraF-like protein 14 278 2.4E-87 T 19-04-2016 IPR014111 Type IV conjugative transfer system protein TraF ALIDE2_RS13990 95cc58d3af5bf751b7e85740f7c7a2cf 292 SUPERFAMILY SSF52833 177 270 2.16E-14 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS13990 95cc58d3af5bf751b7e85740f7c7a2cf 292 Gene3D G3DSA:3.40.30.10 176 269 7.4E-13 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS13990 95cc58d3af5bf751b7e85740f7c7a2cf 292 Pfam PF13728 F plasmid transfer operon protein 49 270 6.6E-74 T 19-04-2016 ALIDE2_RS03110 0a156b6285be70ab568111ca5e4dc347 387 SUPERFAMILY SSF53756 45 370 3.14E-26 T 19-04-2016 ALIDE2_RS03110 0a156b6285be70ab568111ca5e4dc347 387 Pfam PF13692 Glycosyl transferases group 1 213 341 1.8E-7 T 19-04-2016 ALIDE2_RS18325 ac4a21c9d46143a8ab81d4fcc4a85ee2 358 PANTHER PTHR30482:SF10 6 349 4.8E-107 T 19-04-2016 ALIDE2_RS18325 ac4a21c9d46143a8ab81d4fcc4a85ee2 358 PANTHER PTHR30482 6 349 4.8E-107 T 19-04-2016 ALIDE2_RS18325 ac4a21c9d46143a8ab81d4fcc4a85ee2 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 337 3.3E-50 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS05670 7cd9faaa18b3978e2ced69eb87709b74 194 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 9 189 1.3E-46 T 19-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 ALIDE2_RS05670 7cd9faaa18b3978e2ced69eb87709b74 194 SUPERFAMILY SSF52540 9 192 3.1E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05670 7cd9faaa18b3978e2ced69eb87709b74 194 PIRSF PIRSF006135 7 194 8.4E-42 T 19-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 ALIDE2_RS05670 7cd9faaa18b3978e2ced69eb87709b74 194 Gene3D G3DSA:3.40.50.300 9 192 1.0E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05670 7cd9faaa18b3978e2ced69eb87709b74 194 PANTHER PTHR34848 1 194 3.5E-57 T 19-04-2016 ALIDE2_RS10905 463947c49ad36f19c78df316cf736a99 113 Pfam PF11604 Copper binding periplasmic protein CusF 45 111 2.2E-27 T 19-04-2016 IPR021647 Copper binding periplasmic protein CusF ALIDE2_RS02815 979b0facf19807e79adb6cb79a164345 251 SUPERFAMILY SSF56784 12 237 1.49E-41 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS02815 979b0facf19807e79adb6cb79a164345 251 PANTHER PTHR10788:SF42 3 242 3.5E-48 T 19-04-2016 ALIDE2_RS02815 979b0facf19807e79adb6cb79a164345 251 Gene3D G3DSA:3.40.50.1000 12 86 3.3E-43 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS02815 979b0facf19807e79adb6cb79a164345 251 Gene3D G3DSA:3.40.50.1000 159 241 3.3E-43 T 19-04-2016 IPR023214 HAD-like domain ALIDE2_RS02815 979b0facf19807e79adb6cb79a164345 251 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 10 237 1.0E-43 T 19-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 ALIDE2_RS02815 979b0facf19807e79adb6cb79a164345 251 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 203 2.7E-18 T 19-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 ALIDE2_RS02815 979b0facf19807e79adb6cb79a164345 251 PANTHER PTHR10788 3 242 3.5E-48 T 19-04-2016 ALIDE2_RS02815 979b0facf19807e79adb6cb79a164345 251 Pfam PF02358 Trehalose-phosphatase 14 217 2.3E-38 T 19-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 ALIDE2_RS22390 5b45adbe1294718ed76717520fe17b31 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.3E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22390 5b45adbe1294718ed76717520fe17b31 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.3E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22390 5b45adbe1294718ed76717520fe17b31 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.3E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22390 5b45adbe1294718ed76717520fe17b31 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.3E-22 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ALIDE2_RS22390 5b45adbe1294718ed76717520fe17b31 294 SUPERFAMILY SSF46785 1 110 2.82E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS22390 5b45adbe1294718ed76717520fe17b31 294 Pfam PF03466 LysR substrate binding domain 87 289 3.4E-31 T 19-04-2016 IPR005119 LysR, substrate-binding ALIDE2_RS22390 5b45adbe1294718ed76717520fe17b31 294 PANTHER PTHR30293 1 293 8.7E-68 T 19-04-2016 ALIDE2_RS22390 5b45adbe1294718ed76717520fe17b31 294 Gene3D G3DSA:3.40.190.10 189 259 1.5E-13 T 19-04-2016 ALIDE2_RS22390 5b45adbe1294718ed76717520fe17b31 294 SUPERFAMILY SSF53850 89 292 4.81E-30 T 19-04-2016 ALIDE2_RS22390 5b45adbe1294718ed76717520fe17b31 294 Gene3D G3DSA:3.40.190.10 79 188 1.0E-21 T 19-04-2016 ALIDE2_RS22390 5b45adbe1294718ed76717520fe17b31 294 Gene3D G3DSA:1.10.10.10 1 78 2.5E-30 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS05970 6c76dcb7c4db84cd805803eedbf0bbba 249 Pfam PF13681 Type IV pilus assembly protein PilX C-term 119 243 2.1E-18 T 19-04-2016 IPR025205 PilX/PilW C-terminal domain ALIDE2_RS05970 6c76dcb7c4db84cd805803eedbf0bbba 249 Pfam PF14341 PilX N-terminal 15 62 2.1E-8 T 19-04-2016 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain ALIDE2_RS15680 8fa0606e6700781397774fcd5ba045f7 148 Gene3D G3DSA:3.30.420.10 2 144 6.1E-62 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS15680 8fa0606e6700781397774fcd5ba045f7 148 SUPERFAMILY SSF53098 2 144 2.02E-58 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS15680 8fa0606e6700781397774fcd5ba045f7 148 Hamap MF_00042 Ribonuclease H [rnhA]. 1 148 33.549 T 19-04-2016 IPR022892 Ribonuclease H GO:0004523 ALIDE2_RS15680 8fa0606e6700781397774fcd5ba045f7 148 PANTHER PTHR10642 2 144 2.2E-61 T 19-04-2016 ALIDE2_RS15680 8fa0606e6700781397774fcd5ba045f7 148 Pfam PF00075 RNase H 2 142 6.9E-51 T 19-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 ALIDE2_RS01615 75fea4d7f4e91ddaacf980304f501f3e 252 PANTHER PTHR30269 1 248 9.7E-87 T 19-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 ALIDE2_RS01615 75fea4d7f4e91ddaacf980304f501f3e 252 PANTHER PTHR30269:SF0 1 248 9.7E-87 T 19-04-2016 ALIDE2_RS01615 75fea4d7f4e91ddaacf980304f501f3e 252 Pfam PF01925 Sulfite exporter TauE/SafE 8 244 8.5E-44 T 19-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 ALIDE2_RS03820 45f8ea0eaad6e694ffeefefdda6eceb5 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 12 63 3.0E-5 T 19-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ALIDE2_RS03820 45f8ea0eaad6e694ffeefefdda6eceb5 303 SUPERFAMILY SSF161098 88 283 1.2E-26 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS03820 45f8ea0eaad6e694ffeefefdda6eceb5 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 303 4.5E-31 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS03820 45f8ea0eaad6e694ffeefefdda6eceb5 303 Gene3D G3DSA:1.10.3720.10 86 300 1.5E-28 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ALIDE2_RS03820 45f8ea0eaad6e694ffeefefdda6eceb5 303 PANTHER PTHR30465 1 303 1.5E-129 T 19-04-2016 ALIDE2_RS03820 45f8ea0eaad6e694ffeefefdda6eceb5 303 PANTHER PTHR30465:SF67 1 303 1.5E-129 T 19-04-2016 ALIDE2_RS03940 fb29ce9d3a91972f6d16b61f5af3ee4b 267 Gene3D G3DSA:3.60.15.10 8 243 2.9E-43 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS03940 fb29ce9d3a91972f6d16b61f5af3ee4b 267 Pfam PF00753 Metallo-beta-lactamase superfamily 30 223 5.0E-17 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS03940 fb29ce9d3a91972f6d16b61f5af3ee4b 267 PANTHER PTHR32145:SF7 1 256 3.2E-66 T 19-04-2016 ALIDE2_RS03940 fb29ce9d3a91972f6d16b61f5af3ee4b 267 PANTHER PTHR32145 1 256 3.2E-66 T 19-04-2016 ALIDE2_RS03940 fb29ce9d3a91972f6d16b61f5af3ee4b 267 SMART SM00849 31 223 4.0E-10 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS03940 fb29ce9d3a91972f6d16b61f5af3ee4b 267 SUPERFAMILY SSF56281 32 244 1.76E-25 T 19-04-2016 IPR001279 Metallo-beta-lactamase ALIDE2_RS03740 9eff0df8743d30bdca327ddfd70ac893 410 Pfam PF05134 Type II secretion system (T2SS), protein L 27 242 1.1E-11 T 19-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain ALIDE2_RS03740 9eff0df8743d30bdca327ddfd70ac893 410 Pfam PF12693 GspL periplasmic domain 265 353 5.3E-9 T 19-04-2016 IPR025691 GspL periplasmic domain ALIDE2_RS03740 9eff0df8743d30bdca327ddfd70ac893 410 SUPERFAMILY SSF53067 1 145 1.42E-22 T 19-04-2016 ALIDE2_RS23080 0d378661b4e69ed747907e4cd6aba44a 204 PIRSF PIRSF006324 1 204 7.0E-55 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 ALIDE2_RS23080 0d378661b4e69ed747907e4cd6aba44a 204 PANTHER PTHR30086 1 204 1.1E-53 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 ALIDE2_RS23080 0d378661b4e69ed747907e4cd6aba44a 204 PANTHER PTHR30086:SF14 1 204 1.1E-53 T 19-04-2016 ALIDE2_RS23080 0d378661b4e69ed747907e4cd6aba44a 204 Pfam PF01810 LysE type translocator 16 200 4.3E-28 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 ALIDE2_RS17330 df5f6f0f895a369c51a239e635aef1fa 130 PANTHER PTHR30249:SF5 44 130 2.3E-20 T 19-04-2016 ALIDE2_RS17330 df5f6f0f895a369c51a239e635aef1fa 130 Pfam PF04172 LrgB-like family 44 125 3.0E-22 T 19-04-2016 IPR007300 CidB/LrgB family ALIDE2_RS17330 df5f6f0f895a369c51a239e635aef1fa 130 PANTHER PTHR30249 44 130 2.3E-20 T 19-04-2016 ALIDE2_RS16590 c62dead4a134af18888caba95d15f685 279 Gene3D G3DSA:3.40.30.10 137 264 2.7E-31 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS16590 c62dead4a134af18888caba95d15f685 279 PANTHER PTHR35272 10 271 1.2E-29 T 19-04-2016 ALIDE2_RS16590 c62dead4a134af18888caba95d15f685 279 SUPERFAMILY SSF54423 40 96 3.14E-10 T 19-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal ALIDE2_RS16590 c62dead4a134af18888caba95d15f685 279 Pfam PF13098 Thioredoxin-like domain 141 258 1.1E-25 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS16590 c62dead4a134af18888caba95d15f685 279 Pfam PF10411 Disulfide bond isomerase protein N-terminus 43 94 8.8E-15 T 19-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal ALIDE2_RS16590 c62dead4a134af18888caba95d15f685 279 Gene3D G3DSA:3.10.450.70 38 97 7.0E-10 T 19-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal ALIDE2_RS16590 c62dead4a134af18888caba95d15f685 279 ProSitePatterns PS00194 Thioredoxin family active site. 148 166 - T 19-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 ALIDE2_RS16590 c62dead4a134af18888caba95d15f685 279 SUPERFAMILY SSF52833 124 262 7.61E-29 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS13030 a68df56acbe33ed31d97f9c49a55054e 297 PANTHER PTHR11795 1 295 6.0E-43 T 19-04-2016 ALIDE2_RS13030 a68df56acbe33ed31d97f9c49a55054e 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 280 6.4E-34 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS21055 c3dd379e45df6db8ccd1f7936db177a1 413 Gene3D G3DSA:3.40.50.2300 165 338 4.2E-35 T 19-04-2016 ALIDE2_RS21055 c3dd379e45df6db8ccd1f7936db177a1 413 PANTHER PTHR30483 8 413 1.8E-201 T 19-04-2016 ALIDE2_RS21055 c3dd379e45df6db8ccd1f7936db177a1 413 Pfam PF13458 Periplasmic binding protein 38 377 7.5E-87 T 19-04-2016 IPR028081 Leucine-binding protein domain ALIDE2_RS21055 c3dd379e45df6db8ccd1f7936db177a1 413 PANTHER PTHR30483:SF17 8 413 1.8E-201 T 19-04-2016 ALIDE2_RS21055 c3dd379e45df6db8ccd1f7936db177a1 413 SUPERFAMILY SSF53822 38 411 2.53E-87 T 19-04-2016 IPR028082 Periplasmic binding protein-like I ALIDE2_RS11215 61ac42351bf0168c5ffff83b142bd001 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 138 4.4E-29 T 19-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS11215 61ac42351bf0168c5ffff83b142bd001 141 PANTHER PTHR30558 11 138 3.1E-31 T 19-04-2016 ALIDE2_RS18550 4bdd7bb3c0e7dd16bee141f79f7d84ce 65 Pfam PF11127 Protein of unknown function (DUF2892) 1 61 4.9E-23 T 19-04-2016 IPR021309 Protein of unknown function DUF2892 ALIDE2_RS15295 0e874772ea525b8df16f304860c7a74d 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 30 294 3.1E-38 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS15295 0e874772ea525b8df16f304860c7a74d 322 PANTHER PTHR30482 7 304 9.8E-79 T 19-04-2016 ALIDE2_RS15295 0e874772ea525b8df16f304860c7a74d 322 PANTHER PTHR30482:SF2 7 304 9.8E-79 T 19-04-2016 ALIDE2_RS17775 e86dec51fa270e12b613b53907721068 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 16 282 6.3E-43 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS17775 e86dec51fa270e12b613b53907721068 294 PANTHER PTHR11795:SF379 1 293 4.2E-118 T 19-04-2016 ALIDE2_RS17775 e86dec51fa270e12b613b53907721068 294 PANTHER PTHR11795 1 293 4.2E-118 T 19-04-2016 ALIDE2_RS00295 a44629602e469c2fc4a09517756a592c 204 PANTHER PTHR30086 2 203 4.5E-41 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 ALIDE2_RS00295 a44629602e469c2fc4a09517756a592c 204 Pfam PF01810 LysE type translocator 17 203 5.8E-36 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 ALIDE2_RS00295 a44629602e469c2fc4a09517756a592c 204 PIRSF PIRSF006324 1 204 1.5E-48 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 ALIDE2_RS01315 4c51311d28ce32489e12df74ff92f47f 81 Pfam PF03929 PepSY-associated TM region 11 54 3.4E-8 T 19-04-2016 IPR005625 PepSY-associated TM protein ALIDE2_RS01315 4c51311d28ce32489e12df74ff92f47f 81 PANTHER PTHR34219 1 72 1.9E-15 T 19-04-2016 ALIDE2_RS01315 4c51311d28ce32489e12df74ff92f47f 81 PANTHER PTHR34219:SF3 1 72 1.9E-15 T 19-04-2016 ALIDE2_RS05585 b72f22cd5677f87e93c5190e6bc79700 45 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 2.6E-18 T 19-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type ALIDE2_RS05585 b72f22cd5677f87e93c5190e6bc79700 45 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 42 3.0E-11 T 19-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type ALIDE2_RS14765 68382d847fafbb458254eb3c6969fd2f 285 Pfam PF10134 Replication initiator protein A 32 261 1.9E-90 T 19-04-2016 IPR018777 Replication initiator protein A ALIDE2_RS08805 9b7654b833df64f9258a7456a4110c6d 391 PIRSF PIRSF004810 1 388 2.2E-107 T 19-04-2016 IPR014047 Chromate transporter, long chain ALIDE2_RS08805 9b7654b833df64f9258a7456a4110c6d 391 PANTHER PTHR33567 2 387 8.6E-59 T 19-04-2016 ALIDE2_RS08805 9b7654b833df64f9258a7456a4110c6d 391 Pfam PF02417 Chromate transporter 217 384 3.9E-33 T 19-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 ALIDE2_RS08805 9b7654b833df64f9258a7456a4110c6d 391 Pfam PF02417 Chromate transporter 4 166 6.6E-34 T 19-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 ALIDE2_RS08805 9b7654b833df64f9258a7456a4110c6d 391 TIGRFAM TIGR00937 2A51: chromate efflux transporter 10 383 2.0E-131 T 19-04-2016 IPR014047 Chromate transporter, long chain ALIDE2_RS02570 1bd57dcab6c0f7f2808fef0a9797e923 153 SUPERFAMILY SSF54637 8 151 1.95E-27 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS02570 1bd57dcab6c0f7f2808fef0a9797e923 153 PANTHER PTHR13078 7 153 1.3E-16 T 19-04-2016 ALIDE2_RS02570 1bd57dcab6c0f7f2808fef0a9797e923 153 Gene3D G3DSA:3.10.129.10 7 152 9.3E-30 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS03730 f35e3cca219f289464f92c180439d02a 271 Pfam PF01203 Type II secretion system (T2SS), protein N 54 266 2.7E-29 T 19-04-2016 IPR022792 Type II secretion system, protein N ALIDE2_RS01065 b2aceb2d2c407f074731c7f65f1d4150 243 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 24 226 2.2E-41 T 19-04-2016 IPR010239 Conserved hypothetical protein CHP02001 ALIDE2_RS01065 b2aceb2d2c407f074731c7f65f1d4150 243 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 9 242 7.0E-39 T 19-04-2016 IPR010239 Conserved hypothetical protein CHP02001 ALIDE2_RS18940 bbf79d9decbcc5aabd42c75a800a87f0 519 Pfam PF04932 O-Antigen ligase 157 306 7.4E-13 T 19-04-2016 IPR007016 O-antigen ligase-related ALIDE2_RS18940 bbf79d9decbcc5aabd42c75a800a87f0 519 Pfam PF15864 Protein glycosylation ligase 100 124 8.2E-9 T 19-04-2016 IPR031726 Protein glycosylation ligase domain ALIDE2_RS18940 bbf79d9decbcc5aabd42c75a800a87f0 519 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 328 506 1.2E-49 T 19-04-2016 IPR021797 Virulence factor membrane-bound polymerase, C-terminal ALIDE2_RS11410 7e0a400d625549fd6d114117688c1a79 292 Pfam PF11219 Protein of unknown function (DUF3014) 112 278 3.1E-62 T 19-04-2016 IPR021382 Protein of unknown function DUF3014 ALIDE2_RS15935 f40649135423a84da507faa779b7b49e 330 PANTHER PTHR30349 10 275 1.9E-61 T 19-04-2016 ALIDE2_RS15935 f40649135423a84da507faa779b7b49e 330 PANTHER PTHR30349:SF16 10 275 1.9E-61 T 19-04-2016 ALIDE2_RS15935 f40649135423a84da507faa779b7b49e 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 325 2.8E-64 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS15935 f40649135423a84da507faa779b7b49e 330 PIRSF PIRSF017082 4 330 6.5E-61 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS15060 37ae1a6882ab1e4ec3b93dcecff178ca 120 PANTHER PTHR13943 7 101 5.0E-26 T 19-04-2016 ALIDE2_RS15060 37ae1a6882ab1e4ec3b93dcecff178ca 120 PANTHER PTHR13943:SF48 7 101 5.0E-26 T 19-04-2016 ALIDE2_RS22265 4f536687cb3a8735678c974e620e9af8 158 Pfam PF00583 Acetyltransferase (GNAT) family 72 132 1.1E-11 T 19-04-2016 IPR000182 GNAT domain GO:0008080 ALIDE2_RS22265 4f536687cb3a8735678c974e620e9af8 158 Gene3D G3DSA:3.40.630.30 14 158 3.0E-31 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS22265 4f536687cb3a8735678c974e620e9af8 158 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 23 154 2.3E-32 T 19-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 ALIDE2_RS22265 4f536687cb3a8735678c974e620e9af8 158 PANTHER PTHR23091 14 158 1.6E-23 T 19-04-2016 ALIDE2_RS22265 4f536687cb3a8735678c974e620e9af8 158 SUPERFAMILY SSF55729 15 158 3.82E-32 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase ALIDE2_RS01215 279540ce4aaf173c8c195bb4cc758e7e 450 Pfam PF04932 O-Antigen ligase 190 343 3.6E-19 T 19-04-2016 IPR007016 O-antigen ligase-related ALIDE2_RS01215 279540ce4aaf173c8c195bb4cc758e7e 450 PANTHER PTHR37422 155 442 2.8E-21 T 19-04-2016 ALIDE2_RS01215 279540ce4aaf173c8c195bb4cc758e7e 450 PANTHER PTHR37422:SF2 155 442 2.8E-21 T 19-04-2016 ALIDE2_RS01520 4826634096c86c265e074fc9e9929207 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 311 2.8E-43 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS01520 4826634096c86c265e074fc9e9929207 332 PANTHER PTHR30482 24 326 1.1E-74 T 19-04-2016 ALIDE2_RS06160 ef2c71e4a730dcae01275592451f7c58 293 Gene3D G3DSA:3.40.50.1380 3 140 2.1E-32 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain ALIDE2_RS06160 ef2c71e4a730dcae01275592451f7c58 293 Gene3D G3DSA:3.40.50.1380 147 286 2.7E-41 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain ALIDE2_RS06160 ef2c71e4a730dcae01275592451f7c58 293 SUPERFAMILY SSF52335 150 285 2.75E-29 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain ALIDE2_RS06160 ef2c71e4a730dcae01275592451f7c58 293 PANTHER PTHR30492 145 259 2.4E-16 T 19-04-2016 ALIDE2_RS06160 ef2c71e4a730dcae01275592451f7c58 293 ProSitePatterns PS01335 Methylglyoxal synthase active site. 217 225 - T 19-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 ALIDE2_RS06160 ef2c71e4a730dcae01275592451f7c58 293 SUPERFAMILY SSF52335 11 138 5.26E-20 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain ALIDE2_RS10875 5c0ba75d65e1b37b87123330e7570606 115 Pfam PF13663 Domain of unknown function (DUF4148) 4 78 9.2E-16 T 19-04-2016 IPR025421 Protein of unknown function DUF4148 ALIDE2_RS18870 a8f1ef963183e49d2f94854bfa253269 327 PANTHER PTHR30349 21 327 1.4E-75 T 19-04-2016 ALIDE2_RS18870 a8f1ef963183e49d2f94854bfa253269 327 PIRSF PIRSF017082 1 327 1.9E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS18870 a8f1ef963183e49d2f94854bfa253269 327 PANTHER PTHR30349:SF32 21 327 1.4E-75 T 19-04-2016 ALIDE2_RS18870 a8f1ef963183e49d2f94854bfa253269 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 323 1.0E-72 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS17005 7b082f4b242ead8c9a805d09bcacf447 332 Gene3D G3DSA:1.10.3210.10 78 208 1.4E-6 T 19-04-2016 IPR006674 HD domain ALIDE2_RS17005 7b082f4b242ead8c9a805d09bcacf447 332 SUPERFAMILY SSF109604 75 212 3.56E-11 T 19-04-2016 ALIDE2_RS08025 a9d016e57723104e11c106cbeca7bb4b 100 PANTHER PTHR33169 1 92 2.3E-19 T 19-04-2016 ALIDE2_RS08025 a9d016e57723104e11c106cbeca7bb4b 100 PANTHER PTHR33169:SF11 1 92 2.3E-19 T 19-04-2016 ALIDE2_RS08025 a9d016e57723104e11c106cbeca7bb4b 100 SUPERFAMILY SSF46785 3 97 1.84E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS08025 a9d016e57723104e11c106cbeca7bb4b 100 Pfam PF03551 Transcriptional regulator PadR-like family 15 83 3.3E-20 T 19-04-2016 IPR005149 Transcription regulator PadR, N-terminal ALIDE2_RS08025 a9d016e57723104e11c106cbeca7bb4b 100 Gene3D G3DSA:1.10.10.10 9 89 4.6E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS20545 2c088faa09571a03cc6496837782a350 534 PANTHER PTHR22855:SF35 1 534 0.0 T 19-04-2016 ALIDE2_RS20545 2c088faa09571a03cc6496837782a350 534 SUPERFAMILY SSF52096 236 516 4.48E-88 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS20545 2c088faa09571a03cc6496837782a350 534 Pfam PF01039 Carboxyl transferase domain 47 524 4.2E-151 T 19-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 ALIDE2_RS20545 2c088faa09571a03cc6496837782a350 534 SUPERFAMILY SSF52096 22 269 1.24E-69 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS20545 2c088faa09571a03cc6496837782a350 534 PANTHER PTHR22855 1 534 0.0 T 19-04-2016 ALIDE2_RS20545 2c088faa09571a03cc6496837782a350 534 Gene3D G3DSA:3.90.226.10 278 529 5.8E-95 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS20545 2c088faa09571a03cc6496837782a350 534 Gene3D G3DSA:3.90.226.10 26 273 1.5E-79 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS10920 63c4ab64721bbda925e8d2fd6fc1ac59 213 PANTHER PTHR12714:SF11 8 212 2.7E-20 T 19-04-2016 ALIDE2_RS10920 63c4ab64721bbda925e8d2fd6fc1ac59 213 PANTHER PTHR12714 8 212 2.7E-20 T 19-04-2016 ALIDE2_RS10920 63c4ab64721bbda925e8d2fd6fc1ac59 213 Pfam PF04191 Phospholipid methyltransferase 127 193 7.1E-8 T 19-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 ALIDE2_RS24045 6ff160bcd71621ae8f34ee3ca86bf0d9 135 Gene3D G3DSA:1.10.10.10 7 55 1.1E-13 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS24045 6ff160bcd71621ae8f34ee3ca86bf0d9 135 Pfam PF13411 MerR HTH family regulatory protein 3 47 5.6E-5 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ALIDE2_RS24045 6ff160bcd71621ae8f34ee3ca86bf0d9 135 SUPERFAMILY SSF46955 2 60 4.52E-8 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS09115 65a485ad47a8300f43b89bb0b21fba6d 224 Pfam PF13835 Domain of unknown function (DUF4194) 28 199 8.5E-44 T 19-04-2016 IPR025449 Protein of unknown function DUF4194 ALIDE2_RS17310 d6df7575ea56dc22644764f664db1e07 200 Pfam PF07589 PEP-CTERM motif 167 191 6.2E-7 T 19-04-2016 IPR013424 PEP-CTERM protein-sorting domain ALIDE2_RS17310 d6df7575ea56dc22644764f664db1e07 200 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 168 192 7.9E-6 T 19-04-2016 IPR013424 PEP-CTERM protein-sorting domain ALIDE2_RS04170 c98734ec2cc1ca586af174416541b493 457 Pfam PF16933 Putative exopolysaccharide Exporter (EPS-E) 1 454 1.1E-162 T 19-04-2016 IPR031617 Putative exopolysaccharide exporter ALIDE2_RS21980 2f1ed90e71a80a5f5bae08928d553387 214 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 24 186 3.3E-30 T 19-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 ALIDE2_RS21980 2f1ed90e71a80a5f5bae08928d553387 214 Gene3D G3DSA:2.60.450.10 24 182 1.1E-31 T 19-04-2016 ALIDE2_RS21980 2f1ed90e71a80a5f5bae08928d553387 214 PANTHER PTHR36504 1 204 9.4E-17 T 19-04-2016 ALIDE2_RS21980 2f1ed90e71a80a5f5bae08928d553387 214 Pfam PF03968 OstA-like protein 34 154 7.4E-18 T 19-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal ALIDE2_RS21980 2f1ed90e71a80a5f5bae08928d553387 214 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 3 186 26.045 T 19-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 ALIDE2_RS01260 164db5cb0e0c2af41f4c781c7cc480a4 164 Gene3D G3DSA:3.30.530.20 7 162 6.2E-33 T 19-04-2016 IPR023393 START-like domain ALIDE2_RS01260 164db5cb0e0c2af41f4c781c7cc480a4 164 SUPERFAMILY SSF55961 5 161 1.93E-34 T 19-04-2016 ALIDE2_RS01260 164db5cb0e0c2af41f4c781c7cc480a4 164 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 28 140 2.3E-14 T 19-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 ALIDE2_RS23240 91bf7cd5ef96bf3008c4fd0f974f9da1 494 Pfam PF13785 Domain of unknown function (DUF4178) 65 202 2.1E-21 T 19-04-2016 IPR025235 Domain of unknown function DUF4178 ALIDE2_RS23240 91bf7cd5ef96bf3008c4fd0f974f9da1 494 Pfam PF13785 Domain of unknown function (DUF4178) 276 416 3.1E-27 T 19-04-2016 IPR025235 Domain of unknown function DUF4178 ALIDE2_RS13915 7a3a2776c53247aaa08f0f2632e984ed 99 Pfam PF07178 TraL protein 5 98 2.6E-31 T 19-04-2016 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 ALIDE2_RS13915 7a3a2776c53247aaa08f0f2632e984ed 99 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 5 98 2.6E-32 T 19-04-2016 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 ALIDE2_RS08855 c68c0695a8836a9525f713ba875105c1 88 Pfam PF13670 Peptidase propeptide and YPEB domain 7 85 4.5E-16 T 19-04-2016 IPR025711 PepSY domain ALIDE2_RS14165 8d9eb061cddfad1f7476321a6cf8668f 115 Gene3D G3DSA:3.90.1590.10 1 101 1.2E-20 T 19-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 ALIDE2_RS14165 8d9eb061cddfad1f7476321a6cf8668f 115 PANTHER PTHR28620 1 114 3.5E-30 T 19-04-2016 ALIDE2_RS14165 8d9eb061cddfad1f7476321a6cf8668f 115 SUPERFAMILY SSF51316 1 113 8.58E-29 T 19-04-2016 IPR011057 Mss4-like ALIDE2_RS14165 8d9eb061cddfad1f7476321a6cf8668f 115 PANTHER PTHR28620:SF2 1 114 3.5E-30 T 19-04-2016 ALIDE2_RS14165 8d9eb061cddfad1f7476321a6cf8668f 115 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 109 4.8E-8 T 19-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 ALIDE2_RS01865 d3a21b649dd7cca6d120a374150b3769 162 Pfam PF03899 ATP synthase I chain 46 141 6.8E-16 T 19-04-2016 IPR005598 ATP synthase protein I ALIDE2_RS10690 e00af76bad4db917049256d93a02d592 363 PANTHER PTHR11941:SF53 1 193 2.4E-106 T 19-04-2016 ALIDE2_RS10690 e00af76bad4db917049256d93a02d592 363 PANTHER PTHR11941:SF53 250 331 2.4E-106 T 19-04-2016 ALIDE2_RS10690 e00af76bad4db917049256d93a02d592 363 Gene3D G3DSA:3.90.226.10 4 197 9.1E-55 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS10690 e00af76bad4db917049256d93a02d592 363 Pfam PF16113 Enoyl-CoA hydratase/isomerase 16 348 1.4E-120 T 19-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 ALIDE2_RS10690 e00af76bad4db917049256d93a02d592 363 SUPERFAMILY SSF52096 4 198 4.12E-61 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS10690 e00af76bad4db917049256d93a02d592 363 SUPERFAMILY SSF52096 259 333 4.12E-61 T 19-04-2016 IPR029045 ClpP/crotonase-like domain ALIDE2_RS10690 e00af76bad4db917049256d93a02d592 363 PANTHER PTHR11941 1 193 2.4E-106 T 19-04-2016 ALIDE2_RS10690 e00af76bad4db917049256d93a02d592 363 PANTHER PTHR11941 250 331 2.4E-106 T 19-04-2016 ALIDE2_RS20965 ef63bf7b6106ff21ccad439e2a54b874 220 PANTHER PTHR30435:SF15 6 193 6.0E-31 T 19-04-2016 ALIDE2_RS20965 ef63bf7b6106ff21ccad439e2a54b874 220 Pfam PF13861 FlgD Tudor-like domain 87 216 3.3E-11 T 19-04-2016 IPR025963 FlgD Tudor-like domain ALIDE2_RS20965 ef63bf7b6106ff21ccad439e2a54b874 220 PANTHER PTHR30435 6 193 6.0E-31 T 19-04-2016 ALIDE2_RS20965 ef63bf7b6106ff21ccad439e2a54b874 220 Pfam PF13860 FlgD Ig-like domain 110 177 3.2E-11 T 19-04-2016 IPR025965 FlgD Ig-like domain ALIDE2_RS20965 ef63bf7b6106ff21ccad439e2a54b874 220 Pfam PF03963 Flagellar hook capping protein - N-terminal region 10 78 2.5E-21 T 19-04-2016 IPR005648 Flagellar hook capping protein ALIDE2_RS16455 ea4ab994eaea0cd94549165514278dbf 426 SUPERFAMILY SSF56300 1 337 9.19E-39 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS16455 ea4ab994eaea0cd94549165514278dbf 426 Gene3D G3DSA:3.60.21.10 1 273 2.3E-30 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like ALIDE2_RS16455 ea4ab994eaea0cd94549165514278dbf 426 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 264 4.4E-7 T 19-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type ALIDE2_RS16455 ea4ab994eaea0cd94549165514278dbf 426 PANTHER PTHR30337 1 374 7.8E-12 T 19-04-2016 ALIDE2_RS20945 350340ec75b123d66007e240dd49a2cc 107 Pfam PF04316 Anti-sigma-28 factor, FlgM 48 95 1.9E-10 T 19-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal ALIDE2_RS20945 350340ec75b123d66007e240dd49a2cc 107 SUPERFAMILY SSF101498 23 96 2.22E-12 T 19-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 ALIDE2_RS20945 350340ec75b123d66007e240dd49a2cc 107 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 98 4.4E-19 T 19-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 ALIDE2_RS15320 441f2a7f5fbc31bbaab620b2353ad1cc 521 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 19-04-2016 IPR020845 AMP-binding, conserved site ALIDE2_RS15320 441f2a7f5fbc31bbaab620b2353ad1cc 521 Gene3D G3DSA:3.40.50.980 171 322 7.1E-40 T 19-04-2016 ALIDE2_RS15320 441f2a7f5fbc31bbaab620b2353ad1cc 521 Gene3D G3DSA:3.40.50.980 3 170 6.8E-27 T 19-04-2016 ALIDE2_RS15320 441f2a7f5fbc31bbaab620b2353ad1cc 521 Pfam PF13193 AMP-binding enzyme C-terminal domain 427 502 1.1E-20 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain ALIDE2_RS15320 441f2a7f5fbc31bbaab620b2353ad1cc 521 Gene3D G3DSA:3.30.300.30 413 512 3.8E-30 T 19-04-2016 ALIDE2_RS15320 441f2a7f5fbc31bbaab620b2353ad1cc 521 SUPERFAMILY SSF56801 2 517 1.44E-139 T 19-04-2016 ALIDE2_RS15320 441f2a7f5fbc31bbaab620b2353ad1cc 521 PANTHER PTHR24096 1 514 2.0E-138 T 19-04-2016 ALIDE2_RS15320 441f2a7f5fbc31bbaab620b2353ad1cc 521 Pfam PF00501 AMP-binding enzyme 9 418 1.5E-84 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ALIDE2_RS15320 441f2a7f5fbc31bbaab620b2353ad1cc 521 Gene3D G3DSA:2.30.38.10 336 409 7.6E-23 T 19-04-2016 ALIDE2_RS21675 a4ccbd84816251193a50acf2aa566371 591 Pfam PF08757 CotH protein 141 466 1.9E-52 T 19-04-2016 IPR014867 Spore coat protein CotH ALIDE2_RS19780 a3af191e75d0d122aaf6aa2a94b39b71 451 Pfam PF13699 Domain of unknown function (DUF4157) 40 116 3.3E-30 T 19-04-2016 IPR025295 Domain of unknown function DUF4157 ALIDE2_RS13200 fba9df6db2949080eda149f1996686e1 179 Pfam PF10649 Protein of unknown function (DUF2478) 16 168 4.9E-48 T 19-04-2016 IPR018912 Protein of unknown function DUF2478 ALIDE2_RS15280 f09810393228b0a25c2ee12f7834f00f 197 Gene3D G3DSA:1.20.1290.10 35 179 6.0E-25 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS15280 f09810393228b0a25c2ee12f7834f00f 197 Pfam PF02627 Carboxymuconolactone decarboxylase family 46 128 1.0E-5 T 19-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ALIDE2_RS15280 f09810393228b0a25c2ee12f7834f00f 197 SUPERFAMILY SSF69118 19 180 1.3E-31 T 19-04-2016 IPR029032 AhpD-like ALIDE2_RS05555 54339c17fa1804cbdae61c6a5838e593 475 PANTHER PTHR28641:SF1 127 472 7.5E-125 T 19-04-2016 ALIDE2_RS05555 54339c17fa1804cbdae61c6a5838e593 475 Pfam PF05292 Malonyl-CoA decarboxylase (MCD) 100 447 1.7E-140 T 19-04-2016 IPR007956 Malonyl-CoA decarboxylase GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|UniPathway: UPA00340 ALIDE2_RS05555 54339c17fa1804cbdae61c6a5838e593 475 PANTHER PTHR28641 127 472 7.5E-125 T 19-04-2016 ALIDE2_RS08195 7039c749e4067f3d0c101a5e40d34944 294 Pfam PF00483 Nucleotidyl transferase 13 273 2.9E-27 T 19-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 ALIDE2_RS08195 7039c749e4067f3d0c101a5e40d34944 294 SUPERFAMILY SSF53448 7 282 1.82E-64 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS08195 7039c749e4067f3d0c101a5e40d34944 294 PANTHER PTHR22572:SF14 8 292 3.5E-101 T 19-04-2016 ALIDE2_RS08195 7039c749e4067f3d0c101a5e40d34944 294 Gene3D G3DSA:3.90.550.10 7 280 4.4E-69 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases ALIDE2_RS08195 7039c749e4067f3d0c101a5e40d34944 294 PANTHER PTHR22572 8 292 3.5E-101 T 19-04-2016 ALIDE2_RS08195 7039c749e4067f3d0c101a5e40d34944 294 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 6 270 4.3E-113 T 19-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 ALIDE2_RS00150 442ce42824c2da25a1b445d33c1baabe 323 PANTHER PTHR30349:SF16 26 317 1.8E-80 T 19-04-2016 ALIDE2_RS00150 442ce42824c2da25a1b445d33c1baabe 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 321 7.8E-101 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00150 442ce42824c2da25a1b445d33c1baabe 323 SUPERFAMILY SSF53850 111 291 2.41E-14 T 19-04-2016 ALIDE2_RS00150 442ce42824c2da25a1b445d33c1baabe 323 PIRSF PIRSF017082 1 323 4.7E-81 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS00150 442ce42824c2da25a1b445d33c1baabe 323 PANTHER PTHR30349 26 317 1.8E-80 T 19-04-2016 ALIDE2_RS09575 b18fb8db064d93683bec0ce1e326ba04 304 Pfam PF11920 Protein of unknown function (DUF3438) 10 283 4.9E-119 T 19-04-2016 IPR021844 Integrating conjugative element protein, PFL4704 ALIDE2_RS09575 b18fb8db064d93683bec0ce1e326ba04 304 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 14 274 5.7E-108 T 19-04-2016 IPR021844 Integrating conjugative element protein, PFL4704 ALIDE2_RS11675 cb8193a31c87dfa9f8b43bcc19f83960 201 Pfam PF02545 Maf-like protein 5 195 1.3E-48 T 19-04-2016 IPR003697 Maf-like protein GO:0005737 ALIDE2_RS11675 cb8193a31c87dfa9f8b43bcc19f83960 201 Hamap MF_00528 Septum formation protein Maf [maf]. 4 200 29.26 T 19-04-2016 IPR003697 Maf-like protein GO:0005737 ALIDE2_RS11675 cb8193a31c87dfa9f8b43bcc19f83960 201 SUPERFAMILY SSF52972 4 195 1.31E-52 T 19-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like ALIDE2_RS11675 cb8193a31c87dfa9f8b43bcc19f83960 201 Gene3D G3DSA:3.90.950.10 5 198 2.5E-62 T 19-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like ALIDE2_RS11675 cb8193a31c87dfa9f8b43bcc19f83960 201 PIRSF PIRSF006305 2 200 3.0E-45 T 19-04-2016 IPR003697 Maf-like protein GO:0005737 ALIDE2_RS11675 cb8193a31c87dfa9f8b43bcc19f83960 201 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 194 1.5E-46 T 19-04-2016 IPR003697 Maf-like protein GO:0005737 ALIDE2_RS09005 cf09e18f5191ff6ea81d28cc1fe87839 247 SUPERFAMILY SSF52833 50 219 2.24E-29 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS09005 cf09e18f5191ff6ea81d28cc1fe87839 247 Gene3D G3DSA:3.40.30.10 54 222 5.1E-29 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS09005 cf09e18f5191ff6ea81d28cc1fe87839 247 Pfam PF13462 Thioredoxin 55 198 8.3E-16 T 19-04-2016 IPR012336 Thioredoxin-like fold ALIDE2_RS06435 a45c2ab4e2be9b59fe0ad0410ce534be 231 Gene3D G3DSA:3.40.50.150 18 190 2.1E-18 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS06435 a45c2ab4e2be9b59fe0ad0410ce534be 231 SUPERFAMILY SSF53335 45 190 2.46E-22 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS06435 a45c2ab4e2be9b59fe0ad0410ce534be 231 Pfam PF13649 Methyltransferase domain 62 156 7.1E-11 T 19-04-2016 ALIDE2_RS16250 b31f148577183429a3a18c4823506b28 184 Pfam PF09361 Phasin protein 6 104 2.6E-30 T 19-04-2016 IPR018968 Phasin ALIDE2_RS16250 b31f148577183429a3a18c4823506b28 184 TIGRFAM TIGR01841 phasin: phasin family protein 26 111 1.6E-22 T 19-04-2016 IPR010127 Phasin, subfamily 1 ALIDE2_RS08545 208ae62aa3d715a11093c7556c002ff5 507 PANTHER PTHR30536:SF5 2 507 5.1E-192 T 19-04-2016 ALIDE2_RS08545 208ae62aa3d715a11093c7556c002ff5 507 SMART SM00858 13 82 4.6E-16 T 19-04-2016 IPR013974 SAF domain ALIDE2_RS08545 208ae62aa3d715a11093c7556c002ff5 507 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 109 505 8.0E-154 T 19-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 ALIDE2_RS08545 208ae62aa3d715a11093c7556c002ff5 507 PANTHER PTHR30536 2 507 5.1E-192 T 19-04-2016 ALIDE2_RS08545 208ae62aa3d715a11093c7556c002ff5 507 Pfam PF08666 SAF domain 13 82 4.9E-13 T 19-04-2016 IPR013974 SAF domain ALIDE2_RS02990 d8751bbfb2f6f32ec0dcfbc3739e5f66 267 Pfam PF01863 Protein of unknown function DUF45 50 260 1.1E-50 T 19-04-2016 IPR002725 Protein of unknown function DUF45 ALIDE2_RS02990 d8751bbfb2f6f32ec0dcfbc3739e5f66 267 PANTHER PTHR30399 31 260 7.2E-35 T 19-04-2016 ALIDE2_RS07960 8506d13af1b0a1c60dd843614063e1d7 94 Gene3D G3DSA:1.10.1220.10 47 83 1.2E-6 T 19-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 ALIDE2_RS07960 8506d13af1b0a1c60dd843614063e1d7 94 SUPERFAMILY SSF47598 47 88 3.0E-8 T 19-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 ALIDE2_RS10850 8506d13af1b0a1c60dd843614063e1d7 94 Gene3D G3DSA:1.10.1220.10 47 83 1.2E-6 T 19-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 ALIDE2_RS10850 8506d13af1b0a1c60dd843614063e1d7 94 SUPERFAMILY SSF47598 47 88 3.0E-8 T 19-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 ALIDE2_RS13670 f09bcc8ea6df541f2face0fc220ed11b 114 Pfam PF11604 Copper binding periplasmic protein CusF 46 112 4.3E-25 T 19-04-2016 IPR021647 Copper binding periplasmic protein CusF ALIDE2_RS19155 3a8fe8c659c0630e152d62d1425667b7 184 Pfam PF06821 Serine hydrolase 7 180 1.9E-46 T 19-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- ALIDE2_RS19155 3a8fe8c659c0630e152d62d1425667b7 184 Gene3D G3DSA:3.40.50.1820 3 183 9.5E-38 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS19155 3a8fe8c659c0630e152d62d1425667b7 184 SUPERFAMILY SSF53474 5 177 1.62E-28 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS20435 0917d097ccc26168e8612e8814b212d3 290 PANTHER PTHR10120 1 290 3.1E-91 T 19-04-2016 ALIDE2_RS20435 0917d097ccc26168e8612e8814b212d3 290 PANTHER PTHR10120:SF19 1 290 3.1E-91 T 19-04-2016 ALIDE2_RS20435 0917d097ccc26168e8612e8814b212d3 290 Hamap MF_00188 Protease HtpX [htpX]. 1 289 25.22 T 19-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 ALIDE2_RS20435 0917d097ccc26168e8612e8814b212d3 290 Pfam PF01435 Peptidase family M48 79 289 2.9E-41 T 19-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ALIDE2_RS20435 0917d097ccc26168e8612e8814b212d3 290 Gene3D G3DSA:3.30.2010.10 75 161 1.2E-28 T 19-04-2016 ALIDE2_RS20830 96a0ce0782369bb44de344bde51c5eea 455 Pfam PF02120 Flagellar hook-length control protein FliK 330 409 1.5E-13 T 19-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal ALIDE2_RS16635 84f689e34bce481d660572f63edac3e8 805 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 420 581 2.4E-27 T 19-04-2016 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN ALIDE2_RS16635 84f689e34bce481d660572f63edac3e8 805 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 673 755 3.6E-20 T 19-04-2016 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN ALIDE2_RS09740 6c21d7df335ce2f1fb453655392fd741 116 Pfam PF02411 MerT mercuric transport protein 1 116 6.5E-65 T 19-04-2016 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 ALIDE2_RS14310 a4ea6ac1830a2e600c45f025ac52a22f 526 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 112 524 2.1E-143 T 19-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 ALIDE2_RS14310 a4ea6ac1830a2e600c45f025ac52a22f 526 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 7 526 2.5E-271 T 19-04-2016 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497|UniPathway: UPA00565 ALIDE2_RS14310 a4ea6ac1830a2e600c45f025ac52a22f 526 PANTHER PTHR30536 1 526 0.0 T 19-04-2016 ALIDE2_RS14310 a4ea6ac1830a2e600c45f025ac52a22f 526 Pfam PF08666 SAF domain 15 84 7.6E-10 T 19-04-2016 IPR013974 SAF domain ALIDE2_RS14310 a4ea6ac1830a2e600c45f025ac52a22f 526 PANTHER PTHR30536:SF1 1 526 0.0 T 19-04-2016 ALIDE2_RS14310 a4ea6ac1830a2e600c45f025ac52a22f 526 SMART SM00858 15 85 2.7E-11 T 19-04-2016 IPR013974 SAF domain ALIDE2_RS09545 a1b4eeeedadaab6a31570c3fe47f7ec9 249 Pfam PF14348 Domain of unknown function (DUF4400) 51 246 2.4E-72 T 19-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type ALIDE2_RS09545 a1b4eeeedadaab6a31570c3fe47f7ec9 249 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 15 249 2.3E-100 T 19-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type ALIDE2_RS02495 36cc2770689f2f916db131e4b0969021 354 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 329 5.1E-29 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS02495 36cc2770689f2f916db131e4b0969021 354 PANTHER PTHR30482 1 351 6.5E-82 T 19-04-2016 ALIDE2_RS02495 36cc2770689f2f916db131e4b0969021 354 PANTHER PTHR30482:SF5 1 351 6.5E-82 T 19-04-2016 ALIDE2_RS16305 877958fd761219a5da458bc8e781bb8e 117 Pfam PF00816 H-NS histone family 12 110 1.4E-19 T 19-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 ALIDE2_RS16305 877958fd761219a5da458bc8e781bb8e 117 SMART SM00528 73 116 8.5E-7 T 19-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ALIDE2_RS16305 877958fd761219a5da458bc8e781bb8e 117 SUPERFAMILY SSF81273 80 116 6.28E-8 T 19-04-2016 ALIDE2_RS16305 877958fd761219a5da458bc8e781bb8e 117 Gene3D G3DSA:4.10.430.10 80 116 4.5E-9 T 19-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ALIDE2_RS16115 29bb772048f2860e90c329d183f75b00 444 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 323 5.1E-26 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS16115 29bb772048f2860e90c329d183f75b00 444 PANTHER PTHR30482 1 363 2.1E-52 T 19-04-2016 ALIDE2_RS20105 5725de8fbd149df2d1c186d3cbfde3d5 290 Pfam PF08478 POTRA domain, FtsQ-type 43 112 9.8E-16 T 19-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type ALIDE2_RS20105 5725de8fbd149df2d1c186d3cbfde3d5 290 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 13 247 20.487 T 19-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 ALIDE2_RS20105 5725de8fbd149df2d1c186d3cbfde3d5 290 PANTHER PTHR35851 1 264 3.3E-38 T 19-04-2016 ALIDE2_RS20105 5725de8fbd149df2d1c186d3cbfde3d5 290 PANTHER PTHR35851:SF1 1 264 3.3E-38 T 19-04-2016 ALIDE2_RS20105 5725de8fbd149df2d1c186d3cbfde3d5 290 Pfam PF03799 Cell division protein FtsQ 116 239 6.3E-17 T 19-04-2016 IPR005548 Cell division protein FtsQ/DivIB ALIDE2_RS01690 7e052ac71d6d78d0eed183c72d6ff030 170 Gene3D G3DSA:1.10.10.10 27 166 2.1E-39 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01690 7e052ac71d6d78d0eed183c72d6ff030 170 SUPERFAMILY SSF46785 21 163 9.59E-36 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ALIDE2_RS01690 7e052ac71d6d78d0eed183c72d6ff030 170 PANTHER PTHR33164 3 167 1.9E-31 T 19-04-2016 ALIDE2_RS01690 7e052ac71d6d78d0eed183c72d6ff030 170 Pfam PF12802 MarR family 55 113 1.1E-11 T 19-04-2016 ALIDE2_RS01690 7e052ac71d6d78d0eed183c72d6ff030 170 SMART SM00347 50 150 4.0E-23 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ALIDE2_RS11335 210fb095c25b04ee7a502f528e4a11ae 411 SUPERFAMILY SSF103473 16 405 1.7E-33 T 19-04-2016 IPR020846 Major facilitator superfamily domain ALIDE2_RS11335 210fb095c25b04ee7a502f528e4a11ae 411 PANTHER PTHR23513 1 411 2.8E-106 T 19-04-2016 ALIDE2_RS11335 210fb095c25b04ee7a502f528e4a11ae 411 Gene3D G3DSA:1.20.1250.20 221 402 5.8E-8 T 19-04-2016 ALIDE2_RS11335 210fb095c25b04ee7a502f528e4a11ae 411 Gene3D G3DSA:1.20.1250.20 41 193 1.0E-12 T 19-04-2016 ALIDE2_RS11335 210fb095c25b04ee7a502f528e4a11ae 411 Pfam PF05977 Transmembrane secretion effector 12 396 1.8E-34 T 19-04-2016 IPR010290 Transmembrane secretion effector ALIDE2_RS11335 210fb095c25b04ee7a502f528e4a11ae 411 PANTHER PTHR23513:SF9 1 411 2.8E-106 T 19-04-2016 ALIDE2_RS09395 8753669a55f555cc1f18712680ebb253 179 Pfam PF11358 Protein of unknown function (DUF3158) 11 164 2.8E-73 T 19-04-2016 IPR021502 Protein of unknown function DUF3158 ALIDE2_RS17995 c21fc10760f5fe38aa3d05759f6deb70 272 Pfam PF02535 ZIP Zinc transporter 92 264 1.8E-18 T 19-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 ALIDE2_RS17995 c21fc10760f5fe38aa3d05759f6deb70 272 Pfam PF02535 ZIP Zinc transporter 7 87 2.4E-7 T 19-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 ALIDE2_RS17995 c21fc10760f5fe38aa3d05759f6deb70 272 PANTHER PTHR16950 38 93 1.3E-13 T 19-04-2016 ALIDE2_RS17995 c21fc10760f5fe38aa3d05759f6deb70 272 PANTHER PTHR16950 109 270 1.3E-13 T 19-04-2016 ALIDE2_RS06815 b968da8e0d9237851bfff81d8fa81042 271 PANTHER PTHR30294:SF26 5 229 2.2E-47 T 19-04-2016 ALIDE2_RS06815 b968da8e0d9237851bfff81d8fa81042 271 PANTHER PTHR30294:SF26 245 270 2.2E-47 T 19-04-2016 ALIDE2_RS06815 b968da8e0d9237851bfff81d8fa81042 271 Pfam PF12679 ABC-2 family transporter protein 7 270 4.3E-36 T 19-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 ALIDE2_RS06815 b968da8e0d9237851bfff81d8fa81042 271 PANTHER PTHR30294 5 229 2.2E-47 T 19-04-2016 ALIDE2_RS06815 b968da8e0d9237851bfff81d8fa81042 271 PANTHER PTHR30294 245 270 2.2E-47 T 19-04-2016 ALIDE2_RS05160 c286fa88b901c37ffbdda9d04203b426 349 SUPERFAMILY SSF52821 91 132 2.1E-24 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS05160 c286fa88b901c37ffbdda9d04203b426 349 SUPERFAMILY SSF52821 17 64 2.1E-24 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS05160 c286fa88b901c37ffbdda9d04203b426 349 PANTHER PTHR30401 18 257 2.9E-66 T 19-04-2016 ALIDE2_RS05160 c286fa88b901c37ffbdda9d04203b426 349 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 15 320 7.5E-108 T 19-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 ALIDE2_RS05160 c286fa88b901c37ffbdda9d04203b426 349 Gene3D G3DSA:3.40.250.10 17 131 4.8E-35 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS05160 c286fa88b901c37ffbdda9d04203b426 349 PANTHER PTHR30401:SF0 18 257 2.9E-66 T 19-04-2016 ALIDE2_RS05160 c286fa88b901c37ffbdda9d04203b426 349 Pfam PF00581 Rhodanese-like domain 16 127 5.9E-9 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS05160 c286fa88b901c37ffbdda9d04203b426 349 SMART SM00450 2 131 1.3E-8 T 19-04-2016 IPR001763 Rhodanese-like domain ALIDE2_RS20455 d128f8b0a0a16bec344d8c7034e351ce 127 PANTHER PTHR36849:SF1 8 125 8.3E-47 T 19-04-2016 ALIDE2_RS20455 d128f8b0a0a16bec344d8c7034e351ce 127 Pfam PF04343 Protein of unknown function, DUF488 11 118 2.3E-30 T 19-04-2016 IPR007438 Protein of unknown function DUF488 ALIDE2_RS20455 d128f8b0a0a16bec344d8c7034e351ce 127 PANTHER PTHR36849 8 125 8.3E-47 T 19-04-2016 ALIDE2_RS04165 453eda9ceffe9e4088b032caf995fcd3 398 Pfam PF12138 Spherulation-specific family 4 148 384 2.6E-40 T 19-04-2016 IPR021986 Spherulation-specific family 4 ALIDE2_RS04165 453eda9ceffe9e4088b032caf995fcd3 398 PANTHER PTHR35040 145 368 4.5E-15 T 19-04-2016 ALIDE2_RS05965 5021cd7b8e72c71c53cbab752bed3bb6 1245 Pfam PF05567 Neisseria PilC beta-propeller domain 624 1016 2.2E-49 T 19-04-2016 IPR008707 PilC beta-propeller domain ALIDE2_RS04410 eff794f4ae1079cb80c1b21af52aacc0 116 Pfam PF07042 TrfA protein 1 92 6.3E-8 T 19-04-2016 IPR010751 Plasmid replication initiator protein TrfA ALIDE2_RS06455 de34efeecca3e71fdbd0c389d372e460 410 Pfam PF13440 Polysaccharide biosynthesis protein 30 318 4.1E-14 T 19-04-2016 ALIDE2_RS15240 5359f78a03897927d74e316bb950be48 60 PANTHER PTHR36154 1 58 6.4E-15 T 19-04-2016 ALIDE2_RS15240 5359f78a03897927d74e316bb950be48 60 SUPERFAMILY SSF46955 3 54 2.93E-5 T 19-04-2016 IPR009061 Putative DNA-binding domain ALIDE2_RS15240 5359f78a03897927d74e316bb950be48 60 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 51 6.7E-23 T 19-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) ALIDE2_RS15425 dd15fb1e58faf5e203716caa3fb6df2b 300 Pfam PF02581 Thiamine monophosphate synthase/TENI 110 281 5.6E-47 T 19-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 ALIDE2_RS15425 dd15fb1e58faf5e203716caa3fb6df2b 300 Gene3D G3DSA:3.20.20.70 91 299 1.5E-56 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ALIDE2_RS15425 dd15fb1e58faf5e203716caa3fb6df2b 300 SUPERFAMILY SSF51391 92 298 2.49E-55 T 19-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 ALIDE2_RS15425 dd15fb1e58faf5e203716caa3fb6df2b 300 PANTHER PTHR20857 92 300 5.3E-46 T 19-04-2016 ALIDE2_RS00190 c382887e53909eb56ae5cd75da9a9e6f 197 Pfam PF07813 LTXXQ motif family protein 60 150 4.0E-22 T 19-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 ALIDE2_RS13925 61bf494709655351ca508283f8e2f5ba 330 Pfam PF06586 TraK protein 54 322 7.7E-75 T 19-04-2016 IPR010563 Pilus assembly TraK ALIDE2_RS13110 802be1d16cedbf82796a321150a9e0e2 216 PANTHER PTHR10204 1 211 7.6E-71 T 19-04-2016 ALIDE2_RS13110 802be1d16cedbf82796a321150a9e0e2 216 Gene3D G3DSA:3.40.50.360 1 203 1.4E-64 T 19-04-2016 IPR029039 Flavoprotein-like domain ALIDE2_RS13110 802be1d16cedbf82796a321150a9e0e2 216 Pfam PF02525 Flavodoxin-like fold 1 201 7.5E-50 T 19-04-2016 IPR003680 Flavodoxin-like fold ALIDE2_RS13110 802be1d16cedbf82796a321150a9e0e2 216 SUPERFAMILY SSF52218 1 203 5.12E-55 T 19-04-2016 IPR029039 Flavoprotein-like domain ALIDE2_RS13110 802be1d16cedbf82796a321150a9e0e2 216 PANTHER PTHR10204:SF37 1 211 7.6E-71 T 19-04-2016 ALIDE2_RS13110 802be1d16cedbf82796a321150a9e0e2 216 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 202 31.505 T 19-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 ALIDE2_RS19815 0826354af5ba68f90171389f0cb46fba 630 Pfam PF04984 Phage tail sheath protein 336 623 3.6E-34 T 19-04-2016 IPR007067 Tail sheath protein ALIDE2_RS19815 0826354af5ba68f90171389f0cb46fba 630 Pfam PF04984 Phage tail sheath protein 4 202 1.6E-20 T 19-04-2016 IPR007067 Tail sheath protein ALIDE2_RS19815 0826354af5ba68f90171389f0cb46fba 630 PANTHER PTHR35861 4 253 2.8E-106 T 19-04-2016 ALIDE2_RS19815 0826354af5ba68f90171389f0cb46fba 630 PANTHER PTHR35861 314 628 2.8E-106 T 19-04-2016 ALIDE2_RS19815 0826354af5ba68f90171389f0cb46fba 630 PANTHER PTHR35861:SF1 4 253 2.8E-106 T 19-04-2016 ALIDE2_RS19815 0826354af5ba68f90171389f0cb46fba 630 PANTHER PTHR35861:SF1 314 628 2.8E-106 T 19-04-2016 ALIDE2_RS08575 fa74c8506288e930a8009e9515d7bc08 333 Pfam PF05099 Tellurite resistance protein TerB 7 114 1.6E-9 T 19-04-2016 IPR007791 Co-chaperone DjlA, N-terminal ALIDE2_RS08575 fa74c8506288e930a8009e9515d7bc08 333 SUPERFAMILY SSF158682 2 114 4.19E-17 T 19-04-2016 IPR029024 TerB-like ALIDE2_RS08575 fa74c8506288e930a8009e9515d7bc08 333 Gene3D G3DSA:1.10.3680.10 3 116 4.3E-16 T 19-04-2016 IPR029024 TerB-like ALIDE2_RS14780 6f8202d221dfc8a5f4dab9681e1720a7 181 Pfam PF11000 Protein of unknown function (DUF2840) 32 178 3.1E-64 T 19-04-2016 IPR021263 Protein of unknown function DUF2840 ALIDE2_RS01950 221b70f61db4d496400377615478ab34 201 SUPERFAMILY SSF140478 22 179 8.76E-51 T 19-04-2016 IPR023353 LemA-like domain ALIDE2_RS01950 221b70f61db4d496400377615478ab34 201 Gene3D G3DSA:1.20.1440.20 12 192 2.9E-59 T 19-04-2016 IPR023353 LemA-like domain ALIDE2_RS01950 221b70f61db4d496400377615478ab34 201 Pfam PF04011 LemA family 7 192 9.0E-62 T 19-04-2016 IPR007156 LemA ALIDE2_RS01950 221b70f61db4d496400377615478ab34 201 PANTHER PTHR34478 1 195 4.7E-83 T 19-04-2016 ALIDE2_RS01950 221b70f61db4d496400377615478ab34 201 PANTHER PTHR34478:SF2 1 195 4.7E-83 T 19-04-2016 ALIDE2_RS19950 0c4bd78c5609b86070538c4913c76a96 105 PIRSF PIRSF019883 1 102 8.6E-33 T 19-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane ALIDE2_RS19950 0c4bd78c5609b86070538c4913c76a96 105 Pfam PF10993 Protein of unknown function (DUF2818) 6 98 3.3E-36 T 19-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane ALIDE2_RS06805 d53e94be6f1d4fec1fcb6d7f921bd380 204 PANTHER PTHR41247 48 204 2.9E-17 T 19-04-2016 ALIDE2_RS06805 d53e94be6f1d4fec1fcb6d7f921bd380 204 SUPERFAMILY SSF160387 79 197 1.12E-27 T 19-04-2016 ALIDE2_RS06805 d53e94be6f1d4fec1fcb6d7f921bd380 204 Pfam PF05573 NosL 57 190 1.4E-22 T 19-04-2016 IPR008719 Nitrous oxide reductase accessory protein NosL ALIDE2_RS17045 c766276336be5ddad5b46121d104d86f 334 Gene3D G3DSA:3.30.360.10 164 282 3.5E-48 T 19-04-2016 ALIDE2_RS17045 c766276336be5ddad5b46121d104d86f 334 Pfam PF16654 Diaminopimelic acid dehydrogenase C-terminal domain 130 283 3.3E-75 T 19-04-2016 IPR032094 Meso-diaminopimelate D-dehydrogenase, C-terminal KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942|UniPathway: UPA00034 ALIDE2_RS17045 c766276336be5ddad5b46121d104d86f 334 TIGRFAM TIGR01921 DAP-DH: diaminopimelate dehydrogenase 10 333 1.9E-132 T 19-04-2016 IPR010190 Diaminopimelate dehydrogenase, Ddh GO:0009089|GO:0047850 KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942|UniPathway: UPA00034 ALIDE2_RS17045 c766276336be5ddad5b46121d104d86f 334 SUPERFAMILY SSF51735 11 156 8.19E-22 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS17045 c766276336be5ddad5b46121d104d86f 334 PIRSF PIRSF025648 8 334 9.1E-131 T 19-04-2016 IPR010190 Diaminopimelate dehydrogenase, Ddh GO:0009089|GO:0047850 KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942|UniPathway: UPA00034 ALIDE2_RS17045 c766276336be5ddad5b46121d104d86f 334 SUPERFAMILY SSF55347 131 282 3.14E-56 T 19-04-2016 ALIDE2_RS17045 c766276336be5ddad5b46121d104d86f 334 Gene3D G3DSA:3.40.50.720 8 163 1.8E-29 T 19-04-2016 IPR016040 NAD(P)-binding domain ALIDE2_RS21065 bf90483762bcb6675b0a28dd478ca65c 223 PANTHER PTHR20935:SF1 150 222 1.4E-16 T 19-04-2016 ALIDE2_RS21065 bf90483762bcb6675b0a28dd478ca65c 223 PANTHER PTHR20935:SF1 1 120 1.4E-16 T 19-04-2016 ALIDE2_RS21065 bf90483762bcb6675b0a28dd478ca65c 223 Gene3D G3DSA:3.40.50.1240 3 213 1.7E-28 T 19-04-2016 IPR029033 Histidine phosphatase superfamily ALIDE2_RS21065 bf90483762bcb6675b0a28dd478ca65c 223 SUPERFAMILY SSF53254 1 217 1.96E-38 T 19-04-2016 IPR029033 Histidine phosphatase superfamily ALIDE2_RS21065 bf90483762bcb6675b0a28dd478ca65c 223 SMART SM00855 3 166 2.2E-9 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ALIDE2_RS21065 bf90483762bcb6675b0a28dd478ca65c 223 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 206 1.1E-19 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ALIDE2_RS21065 bf90483762bcb6675b0a28dd478ca65c 223 PANTHER PTHR20935 150 222 1.4E-16 T 19-04-2016 ALIDE2_RS21065 bf90483762bcb6675b0a28dd478ca65c 223 PANTHER PTHR20935 1 120 1.4E-16 T 19-04-2016 ALIDE2_RS14895 dd719ea5dca7b7f8f6c1fe987a396545 198 Pfam PF16036 Chalcone isomerase-like 112 190 2.3E-10 T 19-04-2016 IPR016087 Chalcone isomerase GO:0016872 ALIDE2_RS02265 866a585fe58b6050ff81e29234bd7d1b 140 Gene3D G3DSA:1.10.260.40 46 78 3.3E-5 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS08045 1c258fd39b5b5f92c450938e7e25b2a8 274 Pfam PF06067 Domain of unknown function (DUF932) 37 263 1.0E-58 T 19-04-2016 IPR026325 Protein of unknown function DUF932 ALIDE2_RS16595 80dc46a7eba40501599115a28c29c9a0 221 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 33 145 1.6E-19 T 19-04-2016 IPR014118 Type IV conjugative transfer system protein TraV ALIDE2_RS04825 851add40c55a4fa89536493c5dcc0925 185 PANTHER PTHR30529:SF3 2 184 1.2E-65 T 19-04-2016 ALIDE2_RS04825 851add40c55a4fa89536493c5dcc0925 185 SUPERFAMILY SSF81342 5 180 4.79E-28 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 ALIDE2_RS04825 851add40c55a4fa89536493c5dcc0925 185 PANTHER PTHR30529 2 184 1.2E-65 T 19-04-2016 ALIDE2_RS04825 851add40c55a4fa89536493c5dcc0925 185 Pfam PF01292 Prokaryotic cytochrome b561 9 180 2.6E-22 T 19-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ALIDE2_RS18850 1678efabd4e2e2a3f9cce87c703de46d 174 Gene3D G3DSA:2.160.10.10 3 167 5.6E-47 T 19-04-2016 ALIDE2_RS18850 1678efabd4e2e2a3f9cce87c703de46d 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 8.8E-9 T 19-04-2016 IPR001451 Hexapeptide repeat ALIDE2_RS18850 1678efabd4e2e2a3f9cce87c703de46d 174 PANTHER PTHR13061 1 172 2.0E-69 T 19-04-2016 ALIDE2_RS18850 1678efabd4e2e2a3f9cce87c703de46d 174 SUPERFAMILY SSF51161 5 168 1.15E-47 T 19-04-2016 IPR011004 Trimeric LpxA-like ALIDE2_RS13850 5818127e70c71ebca6f49a748341800a 354 Pfam PF06067 Domain of unknown function (DUF932) 146 323 4.8E-8 T 19-04-2016 IPR026325 Protein of unknown function DUF932 ALIDE2_RS18160 6ca54fb95539954ebfff250cd0cb71be 161 SUPERFAMILY SSF110087 7 145 7.72E-45 T 19-04-2016 IPR007410 DR1885-like metal-binding protein ALIDE2_RS18160 6ca54fb95539954ebfff250cd0cb71be 161 PANTHER PTHR36302:SF1 10 161 5.5E-24 T 19-04-2016 ALIDE2_RS18160 6ca54fb95539954ebfff250cd0cb71be 161 Pfam PF04314 Protein of unknown function (DUF461) 28 129 5.5E-36 T 19-04-2016 IPR007410 DR1885-like metal-binding protein ALIDE2_RS18160 6ca54fb95539954ebfff250cd0cb71be 161 PANTHER PTHR36302 10 161 5.5E-24 T 19-04-2016 ALIDE2_RS08665 824a602766dca2cb78528c4e3eb0083c 157 Gene3D G3DSA:1.20.120.10 45 147 1.2E-9 T 19-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 ALIDE2_RS08665 824a602766dca2cb78528c4e3eb0083c 157 Pfam PF01322 Cytochrome C' 97 146 2.3E-7 T 19-04-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 ALIDE2_RS08665 824a602766dca2cb78528c4e3eb0083c 157 SUPERFAMILY SSF47175 44 146 2.5E-20 T 19-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 ALIDE2_RS20165 41a3427dd8f793173dde20469536bcef 142 SUPERFAMILY SSF89447 2 130 6.28E-39 T 19-04-2016 ALIDE2_RS20165 41a3427dd8f793173dde20469536bcef 142 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 141 1.6E-33 T 19-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 ALIDE2_RS20165 41a3427dd8f793173dde20469536bcef 142 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 142 50.286 T 19-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 ALIDE2_RS20165 41a3427dd8f793173dde20469536bcef 142 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 2 118 2.0E-53 T 19-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 ALIDE2_RS20165 41a3427dd8f793173dde20469536bcef 142 Pfam PF02381 MraZ protein, putative antitoxin-like 2 68 5.4E-12 T 19-04-2016 IPR020603 MraZ domain ALIDE2_RS20165 41a3427dd8f793173dde20469536bcef 142 Pfam PF02381 MraZ protein, putative antitoxin-like 73 128 2.0E-14 T 19-04-2016 IPR020603 MraZ domain ALIDE2_RS20165 41a3427dd8f793173dde20469536bcef 142 PANTHER PTHR34701 2 141 1.0E-41 T 19-04-2016 ALIDE2_RS07655 513196d25818698990be85d4e2cc24cb 297 PANTHER PTHR11795 1 288 7.5E-75 T 19-04-2016 ALIDE2_RS07655 513196d25818698990be85d4e2cc24cb 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 276 9.9E-42 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS07655 513196d25818698990be85d4e2cc24cb 297 PANTHER PTHR11795:SF371 1 288 7.5E-75 T 19-04-2016 ALIDE2_RS13035 33baed91da70655b1f403609ebf73aa3 295 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 278 2.4E-38 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS13035 33baed91da70655b1f403609ebf73aa3 295 PANTHER PTHR30482 4 294 2.6E-56 T 19-04-2016 ALIDE2_RS22565 1eb4020f88af52337ef01f74b511862c 123 Gene3D G3DSA:1.10.260.40 25 56 1.0E-4 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ALIDE2_RS22565 1eb4020f88af52337ef01f74b511862c 123 Pfam PF09722 Protein of unknown function (DUF2384) 73 120 1.3E-8 T 19-04-2016 IPR024467 Domain of unknown function DUF2384 ALIDE2_RS19760 273930622eec21afcbf36e538d10e953 169 SUPERFAMILY SSF69255 5 82 1.44E-16 T 19-04-2016 ALIDE2_RS19760 273930622eec21afcbf36e538d10e953 169 Gene3D G3DSA:2.40.50.230 19 81 3.0E-11 T 19-04-2016 IPR006531 Gp5 N-terminal ALIDE2_RS08830 a33377dc86a0bfa9cd0da472c2fb54bf 151 Pfam PF09828 Chromate resistance exported protein 3 136 1.7E-51 T 19-04-2016 IPR018634 Chromate resistance exported protein ALIDE2_RS14825 1c3fc3ac8d21b392ce4e07a2adf74d36 135 Gene3D G3DSA:1.10.3680.10 6 130 1.1E-9 T 19-04-2016 IPR029024 TerB-like ALIDE2_RS14825 1c3fc3ac8d21b392ce4e07a2adf74d36 135 Pfam PF05099 Tellurite resistance protein TerB 11 125 3.6E-8 T 19-04-2016 IPR007791 Co-chaperone DjlA, N-terminal ALIDE2_RS14825 1c3fc3ac8d21b392ce4e07a2adf74d36 135 SUPERFAMILY SSF158682 6 130 1.57E-13 T 19-04-2016 IPR029024 TerB-like ALIDE2_RS17450 8ca0eae613342e6f9295ec1d43aca25e 361 Pfam PF01594 Domain of unknown function DUF20 31 357 7.6E-11 T 19-04-2016 IPR002549 Transmembrane protein TqsA-like ALIDE2_RS17350 bb88176419594494240965c53e8e9aa1 322 PANTHER PTHR30349:SF16 1 294 1.4E-84 T 19-04-2016 ALIDE2_RS17350 bb88176419594494240965c53e8e9aa1 322 PANTHER PTHR30349 1 294 1.4E-84 T 19-04-2016 ALIDE2_RS17350 bb88176419594494240965c53e8e9aa1 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 318 2.4E-74 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS17350 bb88176419594494240965c53e8e9aa1 322 PIRSF PIRSF017082 1 322 1.7E-77 T 19-04-2016 IPR005064 Bordetella uptake gene GO:0030288 ALIDE2_RS17350 bb88176419594494240965c53e8e9aa1 322 SUPERFAMILY SSF53850 113 284 1.58E-12 T 19-04-2016 ALIDE2_RS22250 9c97e20484e58da7efc6d05912bbccbe 519 Gene3D G3DSA:3.40.50.1820 398 441 3.7E-17 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS22250 9c97e20484e58da7efc6d05912bbccbe 519 Gene3D G3DSA:3.40.50.1820 96 289 3.7E-17 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS22250 9c97e20484e58da7efc6d05912bbccbe 519 SUPERFAMILY SSF53474 97 249 6.85E-18 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS22250 9c97e20484e58da7efc6d05912bbccbe 519 SUPERFAMILY SSF53474 318 440 6.85E-18 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS15810 466537f97d28c7c1c48f740733d4f274 405 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 298 389 9.0E-28 T 19-04-2016 IPR016772 Uncharacterised conserved protein UCP020408 ALIDE2_RS06910 87cbc5c39492648177428d0a78537e8c 270 Gene3D G3DSA:3.40.50.1820 4 260 1.3E-30 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS06910 87cbc5c39492648177428d0a78537e8c 270 SUPERFAMILY SSF53474 4 262 5.91E-32 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold ALIDE2_RS06910 87cbc5c39492648177428d0a78537e8c 270 Pfam PF12697 Alpha/beta hydrolase family 4 257 3.7E-14 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 ALIDE2_RS06910 87cbc5c39492648177428d0a78537e8c 270 PANTHER PTHR10992 4 264 8.7E-19 T 19-04-2016 ALIDE2_RS15355 fa016f776d808bce4be88f1d2858c924 267 PANTHER PTHR30269:SF2 1 265 1.3E-54 T 19-04-2016 ALIDE2_RS15355 fa016f776d808bce4be88f1d2858c924 267 PANTHER PTHR30269 1 265 1.3E-54 T 19-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 ALIDE2_RS15355 fa016f776d808bce4be88f1d2858c924 267 Pfam PF01925 Sulfite exporter TauE/SafE 6 264 3.4E-45 T 19-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 ALIDE2_RS22190 fbe16b8c1a9e7379d457d744440ce0a2 180 Pfam PF04355 SmpA / OmlA family 45 109 3.2E-23 T 19-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 ALIDE2_RS22190 fbe16b8c1a9e7379d457d744440ce0a2 180 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 11 154 24.566 T 19-04-2016 IPR026592 Outer membrane protein assembly factor BamE ALIDE2_RS22190 fbe16b8c1a9e7379d457d744440ce0a2 180 PANTHER PTHR37482 4 124 2.1E-21 T 19-04-2016 ALIDE2_RS22190 fbe16b8c1a9e7379d457d744440ce0a2 180 PANTHER PTHR37482:SF1 4 124 2.1E-21 T 19-04-2016 ALIDE2_RS21965 3943a99645f3d9f1e1d8a0b0b225a41f 147 SUPERFAMILY SSF54637 2 139 8.27E-29 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS21965 3943a99645f3d9f1e1d8a0b0b225a41f 147 Gene3D G3DSA:3.10.129.10 10 139 2.1E-28 T 19-04-2016 IPR029069 HotDog domain ALIDE2_RS21965 3943a99645f3d9f1e1d8a0b0b225a41f 147 PANTHER PTHR31793 1 140 1.1E-22 T 19-04-2016 ALIDE2_RS21965 3943a99645f3d9f1e1d8a0b0b225a41f 147 Pfam PF13279 Thioesterase-like superfamily 25 136 1.3E-14 T 19-04-2016 ALIDE2_RS01635 c19655435150d6ea8e4eb86d1e16996a 325 PANTHER PTHR36698:SF2 2 324 2.3E-66 T 19-04-2016 ALIDE2_RS01635 c19655435150d6ea8e4eb86d1e16996a 325 Pfam PF02470 MlaD protein 44 112 1.7E-11 T 19-04-2016 IPR003399 Mce/MlaD ALIDE2_RS01635 c19655435150d6ea8e4eb86d1e16996a 325 PANTHER PTHR36698 2 324 2.3E-66 T 19-04-2016 ALIDE2_RS18645 67a566cdcb579fead450b4c7f3da8a5e 220 Gene3D G3DSA:3.40.109.10 1 76 6.3E-44 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 ALIDE2_RS18645 67a566cdcb579fead450b4c7f3da8a5e 220 Gene3D G3DSA:3.40.109.10 119 209 6.3E-44 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 ALIDE2_RS18645 67a566cdcb579fead450b4c7f3da8a5e 220 PANTHER PTHR23026:SF90 1 217 8.8E-40 T 19-04-2016 ALIDE2_RS18645 67a566cdcb579fead450b4c7f3da8a5e 220 Pfam PF00881 Nitroreductase family 7 193 4.8E-29 T 19-04-2016 IPR029479 Nitroreductase ALIDE2_RS18645 67a566cdcb579fead450b4c7f3da8a5e 220 SUPERFAMILY SSF55469 1 212 2.49E-42 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 ALIDE2_RS18645 67a566cdcb579fead450b4c7f3da8a5e 220 PANTHER PTHR23026 1 217 8.8E-40 T 19-04-2016 ALIDE2_RS21290 ff988e1e57f2637fabb7481667672898 188 Pfam PF00156 Phosphoribosyl transferase domain 14 158 1.7E-19 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 ALIDE2_RS21290 ff988e1e57f2637fabb7481667672898 188 PANTHER PTHR11608 5 155 2.7E-13 T 19-04-2016 ALIDE2_RS21290 ff988e1e57f2637fabb7481667672898 188 SUPERFAMILY SSF53271 9 159 1.56E-22 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS21290 ff988e1e57f2637fabb7481667672898 188 Gene3D G3DSA:3.40.50.2020 10 159 7.5E-28 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like ALIDE2_RS00085 bcb386de27d6931b525c6e4c5968b153 590 PANTHER PTHR13943 134 577 6.1E-151 T 19-04-2016 ALIDE2_RS00085 bcb386de27d6931b525c6e4c5968b153 590 PANTHER PTHR13943 41 115 6.1E-151 T 19-04-2016 ALIDE2_RS00085 bcb386de27d6931b525c6e4c5968b153 590 PANTHER PTHR13943:SF48 134 577 6.1E-151 T 19-04-2016 ALIDE2_RS00085 bcb386de27d6931b525c6e4c5968b153 590 PANTHER PTHR13943:SF48 41 115 6.1E-151 T 19-04-2016 ALIDE2_RS00085 bcb386de27d6931b525c6e4c5968b153 590 Pfam PF07287 Protein of unknown function (DUF1446) 7 347 3.2E-113 T 19-04-2016 IPR010839 Protein of unknown function DUF1446 ALIDE2_RS22880 b3ee53f14548f2b63cf8a9d10c6a4267 111 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 9 105 5.6E-27 T 19-04-2016 IPR008407 Branched-chain amino acid transport, AzlD ALIDE2_RS11460 c48470a5dc65901cce14828d59daf15a 420 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 254 412 2.2E-43 T 19-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain ALIDE2_RS11460 c48470a5dc65901cce14828d59daf15a 420 Pfam PF07005 Putative sugar-binding N-terminal domain 6 231 6.6E-70 T 19-04-2016 IPR010737 Putative sugar-binding, N-terminal domain ALIDE2_RS11460 c48470a5dc65901cce14828d59daf15a 420 SUPERFAMILY SSF142764 6 419 5.36E-127 T 19-04-2016 ALIDE2_RS11460 c48470a5dc65901cce14828d59daf15a 420 PANTHER PTHR30304 131 420 1.3E-72 T 19-04-2016 ALIDE2_RS11460 c48470a5dc65901cce14828d59daf15a 420 PANTHER PTHR30304:SF3 131 420 1.3E-72 T 19-04-2016 ALIDE2_RS07225 83ad5fe376d6200fbce3ef0597e63873 695 Pfam PF05650 Domain of unknown function (DUF802) 321 371 4.1E-12 T 19-04-2016 IPR008520 Domain of unknown function DUF802 ALIDE2_RS14225 9fae2512e1e6fcf69c9cc6221bae64bc 151 PANTHER PTHR34606 37 148 3.4E-14 T 19-04-2016 ALIDE2_RS14225 9fae2512e1e6fcf69c9cc6221bae64bc 151 SMART SM00749 87 150 2.4E-7 T 19-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria ALIDE2_RS14225 9fae2512e1e6fcf69c9cc6221bae64bc 151 Pfam PF04972 BON domain 82 149 5.1E-20 T 19-04-2016 IPR007055 BON domain ALIDE2_RS14885 f27d6bb675ae84ee6fda9290e973de5a 270 PANTHER PTHR33973 16 256 1.2E-40 T 19-04-2016 ALIDE2_RS14885 f27d6bb675ae84ee6fda9290e973de5a 270 Pfam PF07103 Protein of unknown function (DUF1365) 15 256 3.4E-68 T 19-04-2016 IPR010775 Protein of unknown function DUF1365 ALIDE2_RS19370 199b420b1717ba79c10eaea7e673ac38 300 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 19 296 4.4E-80 T 19-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 ALIDE2_RS19370 199b420b1717ba79c10eaea7e673ac38 300 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 16 298 15.886 T 19-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 ALIDE2_RS19370 199b420b1717ba79c10eaea7e673ac38 300 PANTHER PTHR11048 21 295 6.8E-46 T 19-04-2016 ALIDE2_RS19370 199b420b1717ba79c10eaea7e673ac38 300 Pfam PF01040 UbiA prenyltransferase family 33 281 1.4E-52 T 19-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 ALIDE2_RS08970 64790eaaa7adad84af60a747afe7b362 122 Pfam PF11190 Protein of unknown function (DUF2976) 35 121 6.2E-33 T 19-04-2016 IPR021356 Integrating conjugative element protein PFL4702 ALIDE2_RS08970 64790eaaa7adad84af60a747afe7b362 122 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 20 122 1.6E-45 T 19-04-2016 IPR021356 Integrating conjugative element protein PFL4702 ALIDE2_RS02370 0e06cac732eab47b6c44001d8c99a3cb 95 Pfam PF12091 Protein of unknown function (DUF3567) 1 95 7.0E-38 T 19-04-2016 IPR021951 Protein of unknown function DUF3567 ALIDE2_RS16210 b7534eed686cf5db139b8d684b977c67 131 PANTHER PTHR28259 1 131 1.6E-35 T 19-04-2016 ALIDE2_RS16210 b7534eed686cf5db139b8d684b977c67 131 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 121 17.53 T 19-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ALIDE2_RS16210 b7534eed686cf5db139b8d684b977c67 131 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 116 2.6E-22 T 19-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ALIDE2_RS16210 b7534eed686cf5db139b8d684b977c67 131 TIGRFAM TIGR00494 crcB: protein CrcB 5 116 4.9E-27 T 19-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ALIDE2_RS08070 c1f7c778f62505485712dbb4da61c469 378 Gene3D G3DSA:1.10.287.1080 30 90 7.5E-5 T 19-04-2016 ALIDE2_RS08070 c1f7c778f62505485712dbb4da61c469 378 SUPERFAMILY SSF101386 20 91 4.58E-11 T 19-04-2016 ALIDE2_RS07945 9f23adaa14dbeb044f5558c73c7a69c8 665 Pfam PF11843 Protein of unknown function (DUF3363) 287 662 4.1E-142 T 19-04-2016 IPR021795 Protein of unknown function DUF3363 ALIDE2_RS16525 5fd7e7219c4420040a55175db951d595 220 SUPERFAMILY SSF160930 6 164 1.83E-32 T 19-04-2016 ALIDE2_RS16525 5fd7e7219c4420040a55175db951d595 220 Pfam PF05280 Flagellar transcriptional activator (FlhC) 2 173 1.3E-46 T 19-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 ALIDE2_RS16525 5fd7e7219c4420040a55175db951d595 220 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 148 3.0E-5 T 19-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 ALIDE2_RS22530 afb91154a2528a54a7da962710c23016 223 SUPERFAMILY SSF110997 112 182 1.22E-5 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 ALIDE2_RS00185 ec227603765967db5109eb3e3277f6e9 201 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 108 199 7.4E-25 T 19-04-2016 IPR018550 Lipid A 3-O-deacylase-related ALIDE2_RS00185 ec227603765967db5109eb3e3277f6e9 201 Gene3D G3DSA:2.40.160.20 48 201 8.4E-40 T 19-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ALIDE2_RS13965 a949dfa8c1fcb6a7730df27a63d821da 209 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 16 204 2.0E-68 T 19-04-2016 IPR014114 Type-F conjugative transfer system protein TraW ALIDE2_RS13965 a949dfa8c1fcb6a7730df27a63d821da 209 Pfam PF12477 Sex factor F TraW protein N terminal 8 34 1.1E-4 T 19-04-2016 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain ALIDE2_RS18525 45de9003decc71588b0a1bdf5226da7e 162 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 10 154 4.4E-21 T 19-04-2016 IPR009936 Protein of unknown function DUF1468 ALIDE2_RS23295 7491582f8e3c6594bb11e217b3b0dcc4 334 PANTHER PTHR30482 10 334 6.0E-73 T 19-04-2016 ALIDE2_RS23295 7491582f8e3c6594bb11e217b3b0dcc4 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 29 294 1.4E-42 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 ALIDE2_RS02875 06f373fc417b814156340fbdf34394ee 90 Pfam PF13670 Peptidase propeptide and YPEB domain 9 89 8.7E-24 T 19-04-2016 IPR025711 PepSY domain ALIDE2_RS03490 6fda53021f0f14e1e563d7086eef5ac0 393 PANTHER PTHR12526 1 393 3.4E-60 T 19-04-2016 ALIDE2_RS03490 6fda53021f0f14e1e563d7086eef5ac0 393 Pfam PF00534 Glycosyl transferases group 1 207 370 2.4E-32 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 ALIDE2_RS03490 6fda53021f0f14e1e563d7086eef5ac0 393 Gene3D G3DSA:3.40.50.2000 183 359 3.5E-31 T 19-04-2016 ALIDE2_RS03490 6fda53021f0f14e1e563d7086eef5ac0 393 SUPERFAMILY SSF53756 65 389 1.33E-72 T 19-04-2016 ALIDE2_RS03490 6fda53021f0f14e1e563d7086eef5ac0 393 Pfam PF13439 Glycosyltransferase Family 4 65 201 8.3E-17 T 19-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ALIDE2_RS02450 322094e922ca313111c56091bf517d5a 367 PIRSF PIRSF029285 1 367 4.9E-112 T 19-04-2016 IPR014553 Predicted aminopeptidase ALIDE2_RS02450 322094e922ca313111c56091bf517d5a 367 Pfam PF10023 Putative aminopeptidase 28 362 3.8E-126 T 19-04-2016 IPR014553 Predicted aminopeptidase ALIDE2_RS08985 cf99f483c307278f837889e015ca4361 304 Pfam PF11920 Protein of unknown function (DUF3438) 11 284 7.8E-126 T 19-04-2016 IPR021844 Integrating conjugative element protein, PFL4704 ALIDE2_RS08985 cf99f483c307278f837889e015ca4361 304 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 14 275 2.7E-113 T 19-04-2016 IPR021844 Integrating conjugative element protein, PFL4704 ALIDE2_RS16365 f4d69559779aa5dfd6238b9430b354e8 540 SUPERFAMILY SSF52540 190 449 3.48E-12 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS16365 f4d69559779aa5dfd6238b9430b354e8 540 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 372 441 1.9E-12 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ALIDE2_RS16365 f4d69559779aa5dfd6238b9430b354e8 540 Gene3D G3DSA:3.40.50.300 189 444 4.5E-10 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS05300 fe2f97033a88ad61e81e7c266840f838 130 SUPERFAMILY SSF109635 5 92 1.44E-7 T 19-04-2016 ALIDE2_RS05300 fe2f97033a88ad61e81e7c266840f838 130 PANTHER PTHR33823 4 127 1.5E-16 T 19-04-2016 ALIDE2_RS05300 fe2f97033a88ad61e81e7c266840f838 130 SUPERFAMILY SSF57716 93 128 2.99E-7 T 19-04-2016 ALIDE2_RS05300 fe2f97033a88ad61e81e7c266840f838 130 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 91 125 1.1E-11 T 19-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 ALIDE2_RS14750 a7e084b7c0552682f8552faf049ed995 115 Pfam PF11171 Protein of unknown function (DUF2958) 4 113 2.6E-42 T 19-04-2016 IPR021341 Protein of unknown function DUF2958 ALIDE2_RS08915 c20d044997869adc9ca297826246a1d1 249 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 15 249 1.0E-104 T 19-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type ALIDE2_RS08915 c20d044997869adc9ca297826246a1d1 249 Pfam PF14348 Domain of unknown function (DUF4400) 51 246 9.3E-78 T 19-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type ALIDE2_RS05985 fe66c7b6c338d9c55bb09451270aed0a 168 Gene3D G3DSA:3.30.700.10 1 52 1.9E-4 T 19-04-2016 ALIDE2_RS05985 fe66c7b6c338d9c55bb09451270aed0a 168 Pfam PF12019 Type II transport protein GspH 31 155 4.5E-13 T 19-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 ALIDE2_RS05985 fe66c7b6c338d9c55bb09451270aed0a 168 SUPERFAMILY SSF54523 1 82 4.24E-12 T 19-04-2016 ALIDE2_RS09715 b559d056270341302d75b99f5c2fdfa0 78 Pfam PF05052 MerE protein 1 74 7.1E-47 T 19-04-2016 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 ALIDE2_RS09715 b559d056270341302d75b99f5c2fdfa0 78 ProDom PD007968 PLASMID MERE URF-1 RESISTANCE MERCURY MERCURIC DELTA URF1 PRECURSOR TNIB 18 54 1.0E-7 T 19-04-2016 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 ALIDE2_RS10815 71a53e0525784ee424ce3123b689a9cf 115 Pfam PF11171 Protein of unknown function (DUF2958) 4 114 3.8E-44 T 19-04-2016 IPR021341 Protein of unknown function DUF2958 ALIDE2_RS17360 72a059204a07d85a0b92b7a5048c1cdd 210 Pfam PF13511 Domain of unknown function (DUF4124) 18 71 2.3E-9 T 19-04-2016 IPR025392 Domain of unknown function DUF4124 ALIDE2_RS16475 d16f40e550484644dca507570a31bccf 79 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 27 75 1.0E-9 T 19-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) ALIDE2_RS23250 a73992ccb73419822dd0550fb5108f7f 102 Pfam PF09834 Predicted membrane protein (DUF2061) 15 66 5.7E-17 T 19-04-2016 IPR018638 Domain of unknown function DUF2061, membrane ALIDE2_RS13655 c2bc6cb11bc130ed359dc65fc5b1bf93 83 Pfam PF11666 Protein of unknown function (DUF2933) 25 74 2.2E-23 T 19-04-2016 IPR021682 Protein of unknown function DUF2933 ALIDE2_RS01055 9a399ce3cd87af21bb71f929a3f0e5d3 300 Pfam PF16220 Domain of unknown function (DUF4880) 40 65 9.8E-6 T 19-04-2016 IPR032623 FecR, N-terminal ALIDE2_RS01055 9a399ce3cd87af21bb71f929a3f0e5d3 300 SMART SM00965 130 181 3.8E-8 T 19-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ALIDE2_RS21915 ebdf7a50e1e4bc07b25dc8f018e68d35 175 PIRSF PIRSF006162 14 175 1.6E-34 T 19-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 ALIDE2_RS21915 ebdf7a50e1e4bc07b25dc8f018e68d35 175 PANTHER PTHR36305 9 175 7.8E-36 T 19-04-2016 ALIDE2_RS21915 ebdf7a50e1e4bc07b25dc8f018e68d35 175 SUPERFAMILY SSF101307 17 172 1.96E-32 T 19-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 ALIDE2_RS21915 ebdf7a50e1e4bc07b25dc8f018e68d35 175 Pfam PF04608 Phosphatidylglycerophosphatase A 23 170 1.4E-47 T 19-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 ALIDE2_RS07240 dbf1b9f781edb1437f6d3ca892dd4d21 73 Pfam PF11445 Protein of unknown function (DUF2894) 1 46 3.8E-22 T 19-04-2016 IPR021549 Protein of unknown function DUF2894 ALIDE2_RS07210 becbd34e1262f85103c0b5b67c52efc0 125 PANTHER PTHR30007:SF21 6 108 6.7E-34 T 19-04-2016 ALIDE2_RS07210 becbd34e1262f85103c0b5b67c52efc0 125 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 9 82 1.4E-28 T 19-04-2016 IPR025161 Putative transposase IS4/IS5 family ALIDE2_RS07210 becbd34e1262f85103c0b5b67c52efc0 125 PANTHER PTHR30007 6 108 6.7E-34 T 19-04-2016 ALIDE2_RS20640 16ec1e1ed33030aedbffc241619f5e01 233 Pfam PF13852 Protein of unknown function (DUF4197) 32 230 1.5E-73 T 19-04-2016 IPR025245 Protein of unknown function DUF4197 ALIDE2_RS18360 87f12c2b807fd38161785833fad1f5da 101 SUPERFAMILY SSF141488 29 98 1.57E-11 T 19-04-2016 IPR018660 C-type lysozyme, inhibitor ALIDE2_RS18360 87f12c2b807fd38161785833fad1f5da 101 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 31 94 1.0E-9 T 19-04-2016 IPR018660 C-type lysozyme, inhibitor ALIDE2_RS04080 7ea4bf332ec7f698d9c6b9fb0aa39c1a 162 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 146 6.4E-58 T 19-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 ALIDE2_RS04080 7ea4bf332ec7f698d9c6b9fb0aa39c1a 162 PANTHER PTHR33371 1 146 6.1E-39 T 19-04-2016 ALIDE2_RS04080 7ea4bf332ec7f698d9c6b9fb0aa39c1a 162 Pfam PF02470 MlaD protein 39 116 7.5E-22 T 19-04-2016 IPR003399 Mce/MlaD ALIDE2_RS09515 7382281aee219d516d2657c410a944de 203 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 64 165 4.3E-39 T 19-04-2016 IPR022260 Integrating conjugative element protein PilL, PFGI-1 ALIDE2_RS10550 404a87a2a15995c7e302e599d07399fa 365 PANTHER PTHR30574 14 365 2.3E-43 T 19-04-2016 ALIDE2_RS10550 404a87a2a15995c7e302e599d07399fa 365 Pfam PF04143 Sulphur transport 43 354 1.1E-43 T 19-04-2016 IPR007272 Sulphur transport domain ALIDE2_RS10550 404a87a2a15995c7e302e599d07399fa 365 PANTHER PTHR30574:SF5 14 365 2.3E-43 T 19-04-2016 ALIDE2_RS10420 76296d7aaa06faa17162cb008de9014c 197 Pfam PF07603 Protein of unknown function (DUF1566) 48 194 5.3E-17 T 19-04-2016 IPR011460 Protein of unknown function DUF1566 ALIDE2_RS21710 3ad05154173bdbf45ce70d2670f29dce 293 PANTHER PTHR22911 7 293 1.1E-41 T 19-04-2016 ALIDE2_RS21710 3ad05154173bdbf45ce70d2670f29dce 293 PANTHER PTHR22911:SF70 7 293 1.1E-41 T 19-04-2016 ALIDE2_RS21710 3ad05154173bdbf45ce70d2670f29dce 293 SUPERFAMILY SSF103481 48 149 1.1E-9 T 19-04-2016 ALIDE2_RS21710 3ad05154173bdbf45ce70d2670f29dce 293 Pfam PF00892 EamA-like transporter family 13 145 3.2E-8 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS21710 3ad05154173bdbf45ce70d2670f29dce 293 Pfam PF00892 EamA-like transporter family 154 280 2.8E-6 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ALIDE2_RS21710 3ad05154173bdbf45ce70d2670f29dce 293 SUPERFAMILY SSF103481 191 286 1.11E-9 T 19-04-2016 ALIDE2_RS15545 998f4704c36ea32f121451b60ab63b9e 274 Pfam PF11304 Protein of unknown function (DUF3106) 73 172 4.3E-30 T 19-04-2016 IPR021455 Protein of unknown function DUF3106 ALIDE2_RS19460 86ed2d1b8e2472ce3c9c343ac9f07313 144 Pfam PF08897 Domain of unknown function (DUF1841) 6 139 1.2E-55 T 19-04-2016 IPR014993 Protein of unknown function DUF1841 ALIDE2_RS14000 dbed06d3b133156bffffe4a821343b73 924 Pfam PF07916 TraG-like protein, N-terminal region 3 467 9.1E-102 T 19-04-2016 IPR012931 TraG-like, N-terminal ALIDE2_RS07035 64be7ff3c2be087edeeea85d92006ce6 424 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 19 413 28.369 T 19-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 ALIDE2_RS07035 64be7ff3c2be087edeeea85d92006ce6 424 Pfam PF04551 GcpE protein 32 411 3.0E-109 T 19-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 ALIDE2_RS07035 64be7ff3c2be087edeeea85d92006ce6 424 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 19 410 4.9E-116 T 19-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 ALIDE2_RS07035 64be7ff3c2be087edeeea85d92006ce6 424 PANTHER PTHR30454 3 417 5.3E-134 T 19-04-2016 ALIDE2_RS07035 64be7ff3c2be087edeeea85d92006ce6 424 PIRSF PIRSF004640 12 420 6.8E-125 T 19-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 ALIDE2_RS07035 64be7ff3c2be087edeeea85d92006ce6 424 SUPERFAMILY SSF56014 307 394 4.45E-8 T 19-04-2016 ALIDE2_RS10950 fea9db9e40ed739908642ec65a003a5c 438 Pfam PF02321 Outer membrane efflux protein 56 240 1.9E-13 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS10950 fea9db9e40ed739908642ec65a003a5c 438 Pfam PF02321 Outer membrane efflux protein 276 436 1.3E-9 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ALIDE2_RS10950 fea9db9e40ed739908642ec65a003a5c 438 Gene3D G3DSA:1.20.1600.10 51 425 1.7E-24 T 19-04-2016 ALIDE2_RS10950 fea9db9e40ed739908642ec65a003a5c 438 SUPERFAMILY SSF56954 30 432 4.45E-43 T 19-04-2016 ALIDE2_RS14250 27b8671aa82db4a1ab414537f81770ae 202 Gene3D G3DSA:3.40.50.850 1 202 8.7E-60 T 19-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 ALIDE2_RS14250 27b8671aa82db4a1ab414537f81770ae 202 SUPERFAMILY SSF52499 1 85 3.4E-39 T 19-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 ALIDE2_RS14250 27b8671aa82db4a1ab414537f81770ae 202 SUPERFAMILY SSF52499 113 202 3.4E-39 T 19-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 ALIDE2_RS14250 27b8671aa82db4a1ab414537f81770ae 202 PANTHER PTHR14119 2 93 3.7E-60 T 19-04-2016 ALIDE2_RS14250 27b8671aa82db4a1ab414537f81770ae 202 PANTHER PTHR14119 115 202 3.7E-60 T 19-04-2016 ALIDE2_RS14250 27b8671aa82db4a1ab414537f81770ae 202 Pfam PF00857 Isochorismatase family 9 179 6.2E-24 T 19-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 ALIDE2_RS00125 8c806a6f5a3fe85aa43a50b6cc3600e1 209 SUPERFAMILY SSF53098 3 172 1.37E-48 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS00125 8c806a6f5a3fe85aa43a50b6cc3600e1 209 Gene3D G3DSA:3.30.420.10 3 169 1.0E-50 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ALIDE2_RS00125 8c806a6f5a3fe85aa43a50b6cc3600e1 209 PANTHER PTHR30231 1 207 3.9E-42 T 19-04-2016 ALIDE2_RS00125 8c806a6f5a3fe85aa43a50b6cc3600e1 209 Pfam PF00929 Exonuclease 7 162 2.1E-30 T 19-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ALIDE2_RS00125 8c806a6f5a3fe85aa43a50b6cc3600e1 209 SMART SM00479 4 171 2.2E-34 T 19-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ALIDE2_RS15225 808d25d43c09713de133688e91093511 179 Pfam PF09851 Short C-terminal domain 150 175 9.2E-8 T 19-04-2016 IPR018649 SHOCT domain ALIDE2_RS13920 59d8d225b605e639361bb0ae00bd1049 188 Pfam PF05309 TraE protein 1 182 1.4E-57 T 19-04-2016 IPR007973 Pilus assembly TraE GO:0000746 ALIDE2_RS13920 59d8d225b605e639361bb0ae00bd1049 188 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 1 181 7.6E-57 T 19-04-2016 IPR007973 Pilus assembly TraE GO:0000746 ALIDE2_RS03715 f8991b1df2dcd13ed55e30670393a484 175 Pfam PF13682 Chemoreceptor zinc-binding domain 55 121 7.1E-7 T 19-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 ALIDE2_RS03770 33dbecb751cc8613caa6d73cb4e0be60 148 Pfam PF11356 Type II secretion system protein C 65 121 5.1E-8 T 19-04-2016 IPR024961 Type II secretion system protein C, N-terminal ALIDE2_RS06890 412b50dcfe07d9ff8d975fb5c6b55061 351 PANTHER PTHR34220 81 346 3.3E-47 T 19-04-2016 ALIDE2_RS06890 412b50dcfe07d9ff8d975fb5c6b55061 351 Gene3D G3DSA:3.30.565.10 204 342 1.6E-9 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS06890 412b50dcfe07d9ff8d975fb5c6b55061 351 Pfam PF06580 Histidine kinase 148 227 2.2E-17 T 19-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 ALIDE2_RS06890 412b50dcfe07d9ff8d975fb5c6b55061 351 SUPERFAMILY SSF55874 204 340 1.05E-13 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ALIDE2_RS05400 4bb539db659fa03bab3583be89b1fa10 165 Pfam PF07799 Protein of unknown function (DUF1643) 14 150 1.7E-29 T 19-04-2016 IPR012441 Protein of unknown function DUF1643 ALIDE2_RS05520 94eb9f348682d3c6ba0ada0c675b94bf 80 TIGRFAM TIGR04438 small_Trp_rich: small Trp-rich protein 1 76 2.3E-42 T 19-04-2016 IPR031044 Small Trp-rich protein ALIDE2_RS11630 3655e2853292862d1e5f60b765823f91 114 PANTHER PTHR33931 1 110 3.1E-19 T 19-04-2016 ALIDE2_RS11630 3655e2853292862d1e5f60b765823f91 114 Pfam PF03788 LrgA family 12 102 2.2E-22 T 19-04-2016 IPR005538 LrgA/CidA family GO:0016021 ALIDE2_RS11630 3655e2853292862d1e5f60b765823f91 114 PANTHER PTHR33931:SF2 1 110 3.1E-19 T 19-04-2016 ALIDE2_RS03975 72f64564c75d0dacbc2946873266ca1a 185 Pfam PF04351 Pilus assembly protein, PilP 28 177 6.1E-48 T 19-04-2016 IPR007446 Pilus assembly protein PilP ALIDE2_RS03975 72f64564c75d0dacbc2946873266ca1a 185 PIRSF PIRSF016481 3 181 8.0E-43 T 19-04-2016 IPR007446 Pilus assembly protein PilP ALIDE2_RS07985 9227d0164eb5590228ac9307201c4c1e 116 Pfam PF11171 Protein of unknown function (DUF2958) 6 114 5.8E-43 T 19-04-2016 IPR021341 Protein of unknown function DUF2958 ALIDE2_RS10615 4e81b68c2cfc51055bc7e3761fa5a568 865 Pfam PF03993 Domain of Unknown Function (DUF349) 405 483 6.7E-12 T 19-04-2016 IPR007139 Protein of unknown function DUF349 ALIDE2_RS16370 0c307a4832c33dba7cff2f96a4be9406 281 TIGRFAM TIGR04474 tcm_partner: three-Cys-motif partner protein 32 273 1.7E-50 T 19-04-2016 IPR031009 Three-Cys-motif partner protein ALIDE2_RS13930 8e2df309e8ced6164fc3a1f9c5f7f2d9 468 Pfam PF03743 Bacterial conjugation TrbI-like protein 241 436 1.4E-38 T 19-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI ALIDE2_RS16875 b0b08ac9c50794b5ced51a66e195e71e 117 Pfam PF13663 Domain of unknown function (DUF4148) 1 78 4.2E-17 T 19-04-2016 IPR025421 Protein of unknown function DUF4148 ALIDE2_RS11810 4bec45d2f4b677210b3c158c6c6903b6 249 Pfam PF10014 2OG-Fe dioxygenase 50 238 2.5E-62 T 19-04-2016 IPR018724 2OG-Fe dioxygenase ALIDE2_RS07830 2edd59dd1c81ab900f3b53b64c5ee309 72 Pfam PF10038 Protein of unknown function (DUF2274) 5 72 1.3E-25 T 19-04-2016 IPR018733 Protein of unknown function DUF2274 ALIDE2_RS05235 ced91915631c5299d9dba6fff55dcbb0 202 Pfam PF11748 Protein of unknown function (DUF3306) 4 113 2.4E-34 T 19-04-2016 IPR021735 Protein of unknown function DUF3306 ALIDE2_RS17945 8e3970d0fd08a6592ae7de9ad13e5311 238 Pfam PF04402 Protein of unknown function (DUF541) 35 233 6.0E-24 T 19-04-2016 IPR007497 Protein of unknown function DUF541 ALIDE2_RS16180 69e4de6ba697227e328affc3f9ab062a 121 PANTHER PTHR34583:SF1 1 119 1.4E-49 T 19-04-2016 ALIDE2_RS16180 69e4de6ba697227e328affc3f9ab062a 121 PANTHER PTHR34583 1 119 1.4E-49 T 19-04-2016 ALIDE2_RS16180 69e4de6ba697227e328affc3f9ab062a 121 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 111 1.2E-24 T 19-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 ALIDE2_RS07995 3371f80acc139eab35d9525ffe9634dc 104 Pfam PF05284 Protein of unknown function (DUF736) 3 98 7.1E-36 T 19-04-2016 IPR007948 Protein of unknown function DUF736 ALIDE2_RS20440 7f916e79253de0b458be28d3318c37a3 258 Pfam PF11227 Protein of unknown function (DUF3025) 58 256 2.0E-71 T 19-04-2016 IPR021390 Protein of unknown function DUF3025 ALIDE2_RS15550 7929099d18bdfcfcc485440b79267f2a 190 Pfam PF06271 RDD family 30 174 4.9E-17 T 19-04-2016 IPR010432 RDD ALIDE2_RS16580 1765141a3dd2dd2e8cb257002770f254 312 Pfam PF06586 TraK protein 36 304 2.4E-77 T 19-04-2016 IPR010563 Pilus assembly TraK ALIDE2_RS18425 1c7ab9d3f8eba8d7e2e2c97a9ef555b5 185 PANTHER PTHR33877 74 178 6.5E-31 T 19-04-2016 ALIDE2_RS18425 1c7ab9d3f8eba8d7e2e2c97a9ef555b5 185 Pfam PF14279 HNH endonuclease 91 145 1.3E-16 T 19-04-2016 IPR029471 HNH endonuclease 5 ALIDE2_RS18425 1c7ab9d3f8eba8d7e2e2c97a9ef555b5 185 SMART SM00507 80 131 1.8E-9 T 19-04-2016 IPR003615 HNH nuclease ALIDE2_RS21765 7a29efe017b3886d7e922f3e1df78b7c 182 Pfam PF08808 RES domain 15 168 5.2E-22 T 19-04-2016 IPR014914 RES domain ALIDE2_RS21765 7a29efe017b3886d7e922f3e1df78b7c 182 SMART SM00953 27 163 8.8E-16 T 19-04-2016 IPR014914 RES domain ALIDE2_RS19955 f3330b522ef1327dbb1e1f6a47fe8083 154 Pfam PF06676 Protein of unknown function (DUF1178) 2 147 3.9E-52 T 19-04-2016 IPR009562 Protein of unknown function DUF1178 ALIDE2_RS19955 f3330b522ef1327dbb1e1f6a47fe8083 154 PIRSF PIRSF032131 1 151 1.8E-43 T 19-04-2016 IPR009562 Protein of unknown function DUF1178 ALIDE2_RS11850 46db01036684d99abacd886e2df5a8de 132 PANTHER PTHR10516 7 132 6.3E-50 T 19-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type ALIDE2_RS11850 46db01036684d99abacd886e2df5a8de 132 SUPERFAMILY SSF54534 21 131 2.55E-46 T 19-04-2016 ALIDE2_RS11850 46db01036684d99abacd886e2df5a8de 132 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 42 129 1.7E-29 T 19-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 ALIDE2_RS11850 46db01036684d99abacd886e2df5a8de 132 Gene3D G3DSA:3.10.50.40 21 131 6.6E-48 T 19-04-2016 ALIDE2_RS18125 0c30ce417c2b421661f489655370f2d8 389 Pfam PF05940 NnrS protein 2 377 1.3E-65 T 19-04-2016 IPR010266 NnrS ALIDE2_RS08605 57520f29ad042456f059c014360cebbf 147 Pfam PF09361 Phasin protein 10 98 6.9E-6 T 19-04-2016 IPR018968 Phasin ALIDE2_RS18620 ac1cf05e26514ca095edc0b40278fb06 82 SUPERFAMILY SSF53955 24 75 5.91E-10 T 19-04-2016 IPR023346 Lysozyme-like domain ALIDE2_RS14905 cc3802eb995250480f8338d1687af46d 178 Pfam PF12915 Protein of unknown function (DUF3833) 16 177 9.9E-72 T 19-04-2016 IPR024409 Protein of unknown function DUF3833 ALIDE2_RS07080 f84a0ed2766474430da35e27436d2fec 62 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 7 61 5.4E-20 T 19-04-2016 IPR019201 Protein of unknown function DUF2065 ALIDE2_RS00595 a74bc9f5c97aab6ae8060180d1191389 142 Pfam PF01814 Hemerythrin HHE cation binding domain 2 133 6.1E-12 T 19-04-2016 IPR012312 Haemerythrin-like ALIDE2_RS00595 a74bc9f5c97aab6ae8060180d1191389 142 Gene3D G3DSA:1.20.120.520 3 134 5.5E-7 T 19-04-2016 ALIDE2_RS10530 6fa8a17ddc2e7aa807b63047d2477d77 184 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 27 176 1.5E-17 T 19-04-2016 IPR009936 Protein of unknown function DUF1468 ALIDE2_RS11495 b325904eda88b33509b6770f318f9bfd 456 PANTHER PTHR36699 126 324 3.8E-14 T 19-04-2016 ALIDE2_RS11495 b325904eda88b33509b6770f318f9bfd 456 Pfam PF03734 L,D-transpeptidase catalytic domain 197 329 8.3E-14 T 19-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 ALIDE2_RS11495 b325904eda88b33509b6770f318f9bfd 456 SUPERFAMILY SSF141523 195 328 1.57E-13 T 19-04-2016 ALIDE2_RS11495 b325904eda88b33509b6770f318f9bfd 456 Gene3D G3DSA:2.40.440.10 192 329 1.1E-13 T 19-04-2016 ALIDE2_RS16755 84064f89df920de62a8dfe36583d4ca1 116 Pfam PF02411 MerT mercuric transport protein 1 116 8.3E-63 T 19-04-2016 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 ALIDE2_RS12785 bf5e095d77def77c24d63cdce2ab6e03 166 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 152 2.3E-23 T 19-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component ALIDE2_RS21770 b99f4c66dcbe250cf63f132ff25840ef 123 Pfam PF09722 Protein of unknown function (DUF2384) 71 120 4.7E-5 T 19-04-2016 IPR024467 Domain of unknown function DUF2384 ALIDE2_RS06565 dd1c1e17baafe10853b9e97937c99cb3 307 PANTHER PTHR30217:SF8 7 299 1.0E-76 T 19-04-2016 ALIDE2_RS06565 dd1c1e17baafe10853b9e97937c99cb3 307 PANTHER PTHR30217 7 299 1.0E-76 T 19-04-2016 ALIDE2_RS06565 dd1c1e17baafe10853b9e97937c99cb3 307 Pfam PF01136 Peptidase family U32 102 257 3.1E-14 T 19-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- ALIDE2_RS06045 85049865b69ff7f1b40524f179f958ab 66 Pfam PF04102 SlyX 1 66 2.3E-20 T 19-04-2016 IPR007236 SlyX ALIDE2_RS06045 85049865b69ff7f1b40524f179f958ab 66 Gene3D G3DSA:1.20.5.300 1 46 5.8E-9 T 19-04-2016 ALIDE2_RS12520 676d74bafa597f55d5552d3a5a7a241e 242 Pfam PF01569 PAP2 superfamily 89 212 6.6E-7 T 19-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ALIDE2_RS12520 676d74bafa597f55d5552d3a5a7a241e 242 SUPERFAMILY SSF48317 7 222 2.09E-8 T 19-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ALIDE2_RS18095 6c25e68bfcfaf53e5c62c4c2c34cc1a7 107 Pfam PF09919 Uncharacterized conserved protein (DUF2149) 14 102 2.0E-28 T 19-04-2016 IPR018676 Protein of unknown function DUF2149 ALIDE2_RS16625 7355550f7c2bbe4e3edaded5f722046e 341 Pfam PF06834 TraU protein 34 339 7.3E-110 T 19-04-2016 IPR009649 TraU ALIDE2_RS20180 eac5f8896f0baa2a5ec67cb4d1b31656 578 Pfam PF13466 STAS domain 502 567 3.1E-9 T 19-04-2016 IPR002645 STAS domain ALIDE2_RS07535 0e41798720db37b259711c5dc4bc8847 206 Pfam PF11136 Protein of unknown function (DUF2889) 24 148 1.7E-33 T 19-04-2016 IPR021312 Protein of unknown function DUF2889 ALIDE2_RS04140 60c6e5219009431d27c0baa5fb0ecdc7 147 Pfam PF01850 PIN domain 4 115 5.4E-7 T 19-04-2016 IPR002716 PIN domain ALIDE2_RS04140 60c6e5219009431d27c0baa5fb0ecdc7 147 SUPERFAMILY SSF88723 1 118 5.49E-13 T 19-04-2016 IPR029060 PIN domain-like ALIDE2_RS16340 256622511cf7ec0a567b035d866a2411 160 TIGRFAM TIGR03741 PRTRC_E: PRTRC system protein E 3 106 3.4E-32 T 19-04-2016 IPR022273 ParB-related, ThiF-related cassette, protein E ALIDE2_RS09770 b633324a9e8de7130118815d637db8a1 466 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 52 462 8.2E-175 T 19-04-2016 IPR021204 Integrating conjugative element protein, PFL4711 ALIDE2_RS24080 efcd86bb9799562167c7ccd9fef44bbe 98 Pfam PF01527 Transposase 13 49 4.7E-8 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ALIDE2_RS02110 f6b9c0d6318f06f3bf5c124d208bdf03 381 PANTHER PTHR41287 4 381 2.9E-54 T 19-04-2016 ALIDE2_RS02110 f6b9c0d6318f06f3bf5c124d208bdf03 381 Pfam PF03354 Phage Terminase 13 365 5.2E-44 T 19-04-2016 IPR005021 Phage terminase ALIDE2_RS05250 40c6a95925988e805001794f73b9daa9 70 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 3 68 2.7E-14 T 19-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing ALIDE2_RS05250 40c6a95925988e805001794f73b9daa9 70 PIRSF PIRSF036704 1 70 6.8E-14 T 19-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing ALIDE2_RS05230 e5befd59d70fa0ddc372d6ec716280dc 187 Pfam PF11749 Protein of unknown function (DUF3305) 9 153 2.0E-55 T 19-04-2016 IPR021736 Protein of unknown function DUF3305 ALIDE2_RS22000 50f416ca83bc4c80517c28b363823808 108 Pfam PF07769 psiF repeat 72 104 1.1E-18 T 19-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat ALIDE2_RS22000 50f416ca83bc4c80517c28b363823808 108 Pfam PF07769 psiF repeat 36 67 6.9E-17 T 19-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat ALIDE2_RS19975 6f6563543570b24731a0d37da0c02b68 84 Pfam PF05433 Glycine zipper 2TM domain 36 74 7.2E-8 T 19-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 ALIDE2_RS19790 8910132bdb0a9ce0a4dc8dca1219d258 845 Pfam PF13699 Domain of unknown function (DUF4157) 70 143 1.9E-24 T 19-04-2016 IPR025295 Domain of unknown function DUF4157 ALIDE2_RS13880 9c57b1dd93db3a4469c8ef62ba56dbc9 207 Pfam PF14348 Domain of unknown function (DUF4400) 21 204 8.0E-33 T 19-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type ALIDE2_RS03220 97d302181922e3e7c1bb6c57c9969ffc 193 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 41 172 6.9E-28 T 19-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component ALIDE2_RS03220 97d302181922e3e7c1bb6c57c9969ffc 193 PANTHER PTHR35011 28 192 2.2E-24 T 19-04-2016 ALIDE2_RS17570 7ffa9fd5f77effffc264b71a685f4dc4 115 Pfam PF03692 Putative zinc- or iron-chelating domain 7 88 2.2E-8 T 19-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein ALIDE2_RS04400 9da22c7b037a25a7e848f83c04149fc1 296 Pfam PF13280 WYL domain 118 251 2.6E-11 T 19-04-2016 IPR026881 WYL domain ALIDE2_RS04400 9da22c7b037a25a7e848f83c04149fc1 296 PIRSF PIRSF015558 1 286 2.6E-89 T 19-04-2016 IPR016634 Transcription regulator, DeoR type, predicted ALIDE2_RS07970 3066856e800d24d0d06624bc475fde24 285 Pfam PF10134 Replication initiator protein A 32 261 5.6E-92 T 19-04-2016 IPR018777 Replication initiator protein A ALIDE2_RS08800 18bd1ebbdacd5b614b73ee2f54540e41 314 Pfam PF09828 Chromate resistance exported protein 180 307 1.3E-43 T 19-04-2016 IPR018634 Chromate resistance exported protein ALIDE2_RS03495 6d44fa3655a0568209906dc2e3dd4521 540 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 85 239 4.9E-14 T 19-04-2016 ALIDE2_RS06895 14341597874a95a5050eb68fdd1116db 123 Pfam PF13239 2TM domain 38 111 1.2E-17 T 19-04-2016 IPR025698 2TM domain ALIDE2_RS00365 5ce0b74a5e78ee77934043e209cdaab1 240 Pfam PF13453 Transcription factor zinc-finger 7 48 6.4E-9 T 19-04-2016 IPR027392 Transcription factor zinc-finger ALIDE2_RS14685 51d7491c98979ac6104d5c85bd58657b 197 Pfam PF02361 Cobalt transport protein 10 195 1.7E-11 T 19-04-2016 IPR003339 ABC/ECF transporter, transmembrane component ALIDE2_RS02725 4180668d10dd651353b5c7e9d4a23f83 201 Pfam PF10816 Domain of unknown function (DUF2760) 79 200 8.9E-56 T 19-04-2016 IPR021212 Domain of unknown function DUF2760 ALIDE2_RS09475 b9283cf98afb69615378c909fd945ae4 209 Pfam PF11679 Protein of unknown function (DUF3275) 2 205 8.9E-92 T 19-04-2016 IPR021693 Protein of unknown function DUF3275 ALIDE2_RS15605 829d68c7598f4658eb131a59fe7f2c4f 185 Pfam PF11136 Protein of unknown function (DUF2889) 13 138 3.1E-42 T 19-04-2016 IPR021312 Protein of unknown function DUF2889 ALIDE2_RS04745 b414682bc9b0e7fa449113c70a5ab9c3 661 Pfam PF00350 Dynamin family 58 259 2.1E-13 T 19-04-2016 IPR022812 Dynamin superfamily ALIDE2_RS04745 b414682bc9b0e7fa449113c70a5ab9c3 661 Gene3D G3DSA:3.40.50.300 57 107 1.2E-14 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04745 b414682bc9b0e7fa449113c70a5ab9c3 661 Gene3D G3DSA:3.40.50.300 208 318 1.2E-14 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04745 b414682bc9b0e7fa449113c70a5ab9c3 661 SUPERFAMILY SSF52540 33 119 5.16E-24 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS04745 b414682bc9b0e7fa449113c70a5ab9c3 661 SUPERFAMILY SSF52540 189 319 5.16E-24 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALIDE2_RS19570 28aebc16eff3b03cc4c7eae98a510bfc 107 Pfam PF13663 Domain of unknown function (DUF4148) 1 65 9.5E-13 T 19-04-2016 IPR025421 Protein of unknown function DUF4148 ALIDE2_RS14790 b78255154eaf84dfd288eabcc4daa3cc 660 Pfam PF11843 Protein of unknown function (DUF3363) 289 659 2.6E-137 T 19-04-2016 IPR021795 Protein of unknown function DUF3363 ALIDE2_RS01050 1efbaf84002200cbdfd5e01e38ded89a 171 Gene3D G3DSA:2.40.170.20 24 107 9.9E-6 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ALIDE2_RS10455 35d2719baaa7d9d1b917300b8189e801 108 Pfam PF11804 Protein of unknown function (DUF3325) 9 101 1.3E-16 T 19-04-2016 IPR021762 Protein of unknown function DUF3325 ALIDE2_RS12830 7bb98404f090a5cf4aa46e026974b568 270 Pfam PF10001 Uncharacterized protein conserved in bacteria (DUF2242) 79 199 8.4E-52 T 19-04-2016 IPR018718 Protein of unknown function DUF2242 ALIDE2_RS07980 8c5f97c429ada6dadfb134499ae8a846 257 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 132 241 1.7E-29 T 19-04-2016 IPR018754 Protein of unknown function DUF2285 ALIDE2_RS16585 e8974d133e1a27cc2a1139d8fcb3919c 478 Pfam PF03743 Bacterial conjugation TrbI-like protein 247 442 5.5E-37 T 19-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI ALIDE2_RS14830 d8eb0aeadff34dbd589329065bc4f329 76 Pfam PF13453 Transcription factor zinc-finger 2 43 4.5E-22 T 19-04-2016 IPR027392 Transcription factor zinc-finger ALIDE2_RS10005 038e0096523a55f4f1ba55c0b26b6908 284 Pfam PF10546 P63C domain 153 238 6.5E-25 T 19-04-2016 IPR018874 Bacteriophage Mx8, p63, C-terminal ALIDE2_RS00205 a5d3fca259b5df58acc8604ae908100b 83 Pfam PF11730 Protein of unknown function (DUF3297) 10 82 5.8E-35 T 19-04-2016 IPR021724 Protein of unknown function DUF3297 ALIDE2_RS05090 4d5c4b46f38127175f6d2c88b8e2e52e 71 Pfam PF11943 Protein of unknown function (DUF3460) 8 64 1.3E-27 T 19-04-2016 IPR021853 Protein of unknown function DUF3460 ALIDE2_RS14740 8e049de9c82a7abd67c5b87c0ebd45e5 104 Pfam PF05284 Protein of unknown function (DUF736) 3 98 8.2E-36 T 19-04-2016 IPR007948 Protein of unknown function DUF736 ALIDE2_RS09050 da17e790cc0b8a6881e1f7b4c52c2934 507 Pfam PF07916 TraG-like protein, N-terminal region 10 487 2.7E-96 T 19-04-2016 IPR012931 TraG-like, N-terminal ALIDE2_RS13415 b62b73251f4738ddec5f1f295f8aa225 498 Pfam PF04471 Restriction endonuclease 16 135 5.8E-5 T 19-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 ALIDE2_RS02835 db91c67aea9f37a58d08336e05f5ed3f 453 Pfam PF07287 Protein of unknown function (DUF1446) 96 352 3.0E-23 T 19-04-2016 IPR010839 Protein of unknown function DUF1446 ALIDE2_RS02090 3aff92e259ee612bf7d4e4bf3629fe3d 81 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 4 77 5.3E-12 T 19-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor ALIDE2_RS02090 3aff92e259ee612bf7d4e4bf3629fe3d 81 Pfam PF05521 Phage head-tail joining protein 3 76 1.1E-16 T 19-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor ALIDE2_RS06675 61a542026e9f6dd64e332ac67f644733 61 Gene3D G3DSA:3.20.20.450 3 55 4.4E-4 T 19-04-2016 IPR001633 EAL domain ALIDE2_RS00270 f30b140744befeb7682eff0c4bfb9785 98 PANTHER PTHR36931 1 89 4.1E-33 T 19-04-2016 ALIDE2_RS02625 ea936e079a8ec6985b271f26d9151892 88 Gene3D G3DSA:1.20.120.520 23 85 4.9E-4 T 19-04-2016 ALIDE2_RS16960 cba282c721b9faf3e041afa60fc6fbde 168 PIRSF PIRSF019217 1 168 2.4E-87 T 19-04-2016 IPR016750 Acetophenone carboxylase beta subunit/Acetone carboxylase gamma subunit ALIDE2_RS16960 cba282c721b9faf3e041afa60fc6fbde 168 Pfam PF08882 Acetone carboxylase gamma subunit 46 159 8.9E-57 T 19-04-2016 IPR016750 Acetophenone carboxylase beta subunit/Acetone carboxylase gamma subunit ALIDE2_RS01145 0a451a7cc4d05763aca3ef9539a8f200 257 Pfam PF06912 Protein of unknown function (DUF1275) 20 232 1.3E-33 T 19-04-2016 IPR010699 Protein of unknown function DUF1275 ALIDE2_RS01145 0a451a7cc4d05763aca3ef9539a8f200 257 PANTHER PTHR37314 1 251 6.2E-16 T 19-04-2016 ALIDE2_RS13355 51162c629a682e269a95388483f2adc8 135 Pfam PF13664 Domain of unknown function (DUF4149) 8 106 1.2E-20 T 19-04-2016 IPR025423 Domain of unknown function DUF4149 ALIDE2_RS13690 286ef85850a8da4295e308d91b9485c3 195 Pfam PF13271 Domain of unknown function (DUF4062) 5 86 4.4E-19 T 19-04-2016 IPR025139 Domain of unknown function DUF4062 ALIDE2_RS23235 521184db6ed2a703e805eafb22b7edb2 73 Pfam PF03994 Domain of Unknown Function (DUF350) 18 72 5.7E-18 T 19-04-2016 IPR007140 Protein of unknown function DUF350 ALIDE2_RS18760 5fd5de5ed39e7c900255b5a913a0c073 362 Pfam PF06804 NlpB/DapX lipoprotein 28 359 3.1E-62 T 19-04-2016 IPR010653 NlpB/DapX lipoprotein ALIDE2_RS19405 0879ed3781b6cbb772d5cfba2c83f637 395 Pfam PF05762 VWA domain containing CoxE-like protein 188 277 2.1E-8 T 19-04-2016 IPR008912 Uncharacterised protein family CoxE-like ALIDE2_RS01715 c888d7f5f3fc8098c793378a6b5dd0a5 365 Pfam PF04892 VanZ like family 12 128 2.3E-12 T 19-04-2016 IPR006976 VanZ-like ALIDE2_RS04000 49943ac6561a0999c1ecd5af0821e4bd 206 Pfam PF07209 Protein of unknown function (DUF1415) 20 188 8.0E-69 T 19-04-2016 IPR009858 Protein of unknown function DUF1415 ALIDE2_RS09065 6f947a630f291a00063abf0d0c15df85 306 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 10 279 7.2E-43 T 19-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system ALIDE2_RS14585 9100b0eee6191f3920f174935cfbb2fb 108 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 8 95 1.5E-12 T 19-04-2016 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system ALIDE2_RS03735 5b953d7da253fac9a5f42cb229615ae5 169 Pfam PF04612 Type II secretion system (T2SS), protein M 11 151 2.6E-22 T 19-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 ALIDE2_RS08875 bb12c1084ba57c71303e597b22886468 279 SUPERFAMILY SSF49899 132 254 2.46E-5 T 19-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain ALIDE2_RS21075 e6941a29009f34670cfcb2ef1594bbc9 167 Pfam PF07987 Domain of unkown function (DUF1775) 23 153 3.0E-23 T 19-04-2016 IPR012533 GLE1, N-terminal, bacteria ALIDE2_RS09955 dcb7aa29c7c7104d8b39e3ca8d485976 149 Pfam PF11149 Protein of unknown function (DUF2924) 10 143 1.4E-47 T 19-04-2016 IPR021322 Protein of unknown function DUF2924 ALIDE2_RS07875 4c50ade5fef0118972be2391e21deee6 127 Pfam PF04956 TrbC/VIRB2 family 32 117 2.0E-24 T 19-04-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 ALIDE2_RS24030 358c8bf6a0c3b5702c3e2738496cdefd 101 Pfam PF03929 PepSY-associated TM region 3 72 1.5E-10 T 19-04-2016 IPR005625 PepSY-associated TM protein ALIDE2_RS17405 4c5063169dc67b64a399d8c817c359fb 136 Pfam PF04138 GtrA-like protein 16 130 1.4E-17 T 19-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 ALIDE2_RS04780 4f39af86692eb69f4295a2675f0ce8f8 154 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 55 142 5.1E-27 T 19-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain ALIDE2_RS08990 675b21eb8b7e44b09e81d905d3871ab9 477 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 2 467 1.5E-186 T 19-04-2016 IPR021207 Integrating conjugative element protein, PFL4705 ALIDE2_RS09580 013ca7fa10676a546e4977f599666540 489 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 2 479 2.0E-187 T 19-04-2016 IPR021207 Integrating conjugative element protein, PFL4705 ALIDE2_RS00060 cab4ef447ab168c0472c2fc8698c2e32 137 Pfam PF03692 Putative zinc- or iron-chelating domain 24 125 2.8E-13 T 19-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein ALIDE2_RS01960 312ff8f0530b83ab296370c0df31b767 178 Pfam PF11161 Protein of unknown function (DUF2946) 1 171 1.6E-60 T 19-04-2016 IPR021332 Protein of unknown function DUF2944 ALIDE2_RS16810 6a2d11607ee805a5adb551a2ecc73ca1 117 Pfam PF13663 Domain of unknown function (DUF4148) 1 78 5.6E-15 T 19-04-2016 IPR025421 Protein of unknown function DUF4148 ALIDE2_RS10150 13f7d6a77ad3d5186b9340c914916ca5 1345 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 157 231 5.4E-24 T 19-04-2016 IPR013491 Caudovirus, tape measure, N-terminal