locus-tag class description AACI_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix AACI_RS00010 PF00308 Bacterial dnaA protein AACI_RS00010 PF11638 DnaA N-terminal domain AACI_RS00015 PF02767 DNA polymerase III beta subunit, central domain AACI_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain AACI_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain AACI_RS00025 PF02463 RecF/RecN/SMC N terminal domain AACI_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus AACI_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS00030 PF01751 Toprim domain AACI_RS00030 PF00204 DNA gyrase B AACI_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A AACI_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller AACI_RS00070 PF00478 IMP dehydrogenase / GMP reductase domain AACI_RS00070 PF00571 CBS domain AACI_RS00075 PF01680 SOR/SNZ family AACI_RS00080 PF01174 SNO glutamine amidotransferase family AACI_RS00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AACI_RS00085 PF02403 Seryl-tRNA synthetase N-terminal domain AACI_RS00140 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AACI_RS00140 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AACI_RS00160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AACI_RS00160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AACI_RS00160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AACI_RS00165 PF00463 Isocitrate lyase family AACI_RS00175 PF02653 Branched-chain amino acid transport system / permease component AACI_RS00185 PF00005 ABC transporter AACI_RS00190 PF02608 ABC transporter substrate-binding protein PnrA-like AACI_RS00195 PF00857 Isochorismatase family AACI_RS00200 PF00753 Metallo-beta-lactamase superfamily AACI_RS00205 PF03061 Thioesterase superfamily AACI_RS00220 PF00005 ABC transporter AACI_RS00220 PF08402 TOBE domain AACI_RS00235 PF01061 ABC-2 type transporter AACI_RS00240 PF00005 ABC transporter AACI_RS00240 PF13732 Domain of unknown function (DUF4162) AACI_RS00245 PF00486 Transcriptional regulatory protein, C terminal AACI_RS00245 PF00072 Response regulator receiver domain AACI_RS00250 PF16736 Single Cache-like AACI_RS00250 PF00989 PAS fold AACI_RS00250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS00250 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS00260 PF01810 LysE type translocator AACI_RS00270 PF00356 Bacterial regulatory proteins, lacI family AACI_RS00275 PF04309 Glycerol-3-phosphate responsive antiterminator AACI_RS00280 PF07690 Major Facilitator Superfamily AACI_RS00285 PF07739 TipAS antibiotic-recognition domain AACI_RS00285 PF13411 MerR HTH family regulatory protein AACI_RS00290 PF01384 Phosphate transporter family AACI_RS00295 PF01865 Protein of unknown function DUF47 AACI_RS00300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AACI_RS00300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AACI_RS00305 PF01266 FAD dependent oxidoreductase AACI_RS00305 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AACI_RS00315 PF07729 FCD domain AACI_RS00315 PF00392 Bacterial regulatory proteins, gntR family AACI_RS00325 PF07488 Glycosyl hydrolase family 67 middle domain AACI_RS00325 PF03648 Glycosyl hydrolase family 67 N-terminus AACI_RS00325 PF07477 Glycosyl hydrolase family 67 C-terminus AACI_RS00335 PF00474 Sodium:solute symporter family AACI_RS00340 PF11755 Protein of unknown function (DUF3311) AACI_RS00345 PF08447 PAS fold AACI_RS00345 PF00989 PAS fold AACI_RS00345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS00345 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS00350 PF00535 Glycosyl transferase family 2 AACI_RS00355 PF00625 Guanylate kinase AACI_RS00360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS00360 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS00360 PF00989 PAS fold AACI_RS00370 PF00106 short chain dehydrogenase AACI_RS00375 PF00265 Thymidine kinase AACI_RS00390 PF13396 Phospholipase_D-nuclease N-terminal AACI_RS00390 PF13091 PLD-like domain AACI_RS00395 PF03009 Glycerophosphoryl diester phosphodiesterase family AACI_RS00405 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS00410 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS00415 PF02073 Thermophilic metalloprotease (M29) AACI_RS00425 PF01470 Pyroglutamyl peptidase AACI_RS00430 PF00440 Bacterial regulatory proteins, tetR family AACI_RS00430 PF17932 Tetracyclin repressor-like, C-terminal domain AACI_RS00440 PF13538 UvrD-like helicase C-terminal domain AACI_RS00445 PF00300 Histidine phosphatase superfamily (branch 1) AACI_RS00450 PF00342 Phosphoglucose isomerase AACI_RS00455 PF00480 ROK family AACI_RS00490 PF03176 MMPL family AACI_RS00500 PF03079 ARD/ARD' family AACI_RS00510 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AACI_RS00510 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AACI_RS00520 PF00596 Class II Aldolase and Adducin N-terminal domain AACI_RS00525 PF13537 Glutamine amidotransferase domain AACI_RS00525 PF00733 Asparagine synthase AACI_RS00535 PF14437 MafB19-like deaminase AACI_RS00545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS00545 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS00545 PF00989 PAS fold AACI_RS00555 PF12169 DNA polymerase III subunits gamma and tau domain III AACI_RS00560 PF02575 YbaB/EbfC DNA-binding family AACI_RS00565 PF13662 Toprim domain AACI_RS00565 PF02132 RecR protein AACI_RS00570 PF01741 Large-conductance mechanosensitive channel, MscL AACI_RS00575 PF00392 Bacterial regulatory proteins, gntR family AACI_RS00575 PF07729 FCD domain AACI_RS00580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AACI_RS00585 PF00872 Transposase, Mutator family AACI_RS00590 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS00595 PF12911 N-terminal TM domain of oligopeptide transport permease C AACI_RS00595 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS00605 PF07441 SigmaK-factor processing regulatory protein BofA AACI_RS00610 PF14667 Polysaccharide biosynthesis C-terminal domain AACI_RS00610 PF01943 Polysaccharide biosynthesis protein AACI_RS00620 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AACI_RS00620 PF01276 Orn/Lys/Arg decarboxylase, major domain AACI_RS00625 PF02223 Thymidylate kinase AACI_RS00630 PF06153 Cyclic-di-AMP receptor AACI_RS00635 PF09115 DNA polymerase III, delta subunit, C terminal AACI_RS00640 PF04468 PSP1 C-terminal conserved region AACI_RS00645 PF06156 Initiation control protein YabA AACI_RS00650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AACI_RS00655 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AACI_RS00655 PF18277 AbrB C-terminal domain AACI_RS00660 PF09334 tRNA synthetases class I (M) AACI_RS00660 PF01588 Putative tRNA binding domain AACI_RS00660 PF08264 Anticodon-binding domain of tRNA AACI_RS00665 PF01026 TatD related DNase AACI_RS00670 PF13662 Toprim domain AACI_RS00670 PF13331 Domain of unknown function (DUF4093) AACI_RS00675 PF00398 Ribosomal RNA adenine dimethylase AACI_RS00680 PF00005 ABC transporter AACI_RS00680 PF12857 TOBE-like domain AACI_RS00685 PF00268 Ribonucleotide reductase, small chain AACI_RS00715 PF03472 Autoinducer binding domain AACI_RS00715 PF00196 Bacterial regulatory proteins, luxR family AACI_RS00720 PF00390 Malic enzyme, N-terminal domain AACI_RS00720 PF03949 Malic enzyme, NAD binding domain AACI_RS00730 PF13193 AMP-binding enzyme C-terminal domain AACI_RS00730 PF00501 AMP-binding enzyme AACI_RS00735 PF02770 Acyl-CoA dehydrogenase, middle domain AACI_RS00735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACI_RS00735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AACI_RS00740 PF02770 Acyl-CoA dehydrogenase, middle domain AACI_RS00740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AACI_RS00740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACI_RS00745 PF00378 Enoyl-CoA hydratase/isomerase AACI_RS00755 PF00108 Thiolase, N-terminal domain AACI_RS00755 PF02803 Thiolase, C-terminal domain AACI_RS00770 PF03109 ABC1 family AACI_RS00780 PF00171 Aldehyde dehydrogenase family AACI_RS00785 PF00465 Iron-containing alcohol dehydrogenase AACI_RS00795 PF02770 Acyl-CoA dehydrogenase, middle domain AACI_RS00795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACI_RS00795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AACI_RS00810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACI_RS00810 PF02770 Acyl-CoA dehydrogenase, middle domain AACI_RS00810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AACI_RS00815 PF13193 AMP-binding enzyme C-terminal domain AACI_RS00815 PF00501 AMP-binding enzyme AACI_RS00820 PF13452 N-terminal half of MaoC dehydratase AACI_RS00845 PF00149 Calcineurin-like phosphoesterase AACI_RS00860 PF05582 YabG peptidase U57 AACI_RS00870 PF06257 Biofilm formation stimulator VEG AACI_RS00875 PF00269 Small, acid-soluble spore proteins, alpha/beta type AACI_RS00880 PF03575 Peptidase family S51 AACI_RS00885 PF02875 Mur ligase family, glutamate ligase domain AACI_RS00885 PF08443 RimK-like ATP-grasp domain AACI_RS00885 PF08245 Mur ligase middle domain AACI_RS00890 PF00288 GHMP kinases N terminal domain AACI_RS00890 PF08544 GHMP kinases C terminal AACI_RS00895 PF09182 Bacterial purine repressor, N-terminal AACI_RS00895 PF00156 Phosphoribosyl transferase domain AACI_RS00900 PF01042 Endoribonuclease L-PSP AACI_RS00905 PF04026 SpoVG AACI_RS00910 PF00483 Nucleotidyl transferase AACI_RS00910 PF00132 Bacterial transferase hexapeptide (six repeats) AACI_RS00915 PF14572 Phosphoribosyl synthetase-associated domain AACI_RS00915 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AACI_RS00920 PF01195 Peptidyl-tRNA hydrolase AACI_RS00930 PF02559 CarD-like/TRCF domain AACI_RS00930 PF17757 UvrB interaction domain AACI_RS00930 PF00271 Helicase conserved C-terminal domain AACI_RS00930 PF03461 TRCF domain AACI_RS00930 PF00270 DEAD/DEAH box helicase AACI_RS00935 PF15714 Stage V sporulation protein T C-terminal, transcription factor AACI_RS00935 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AACI_RS00945 PF03819 MazG nucleotide pyrophosphohydrolase domain AACI_RS00945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AACI_RS00950 PF00216 Bacterial DNA-binding protein AACI_RS00955 PF01479 S4 domain AACI_RS00975 PF00575 S1 RNA binding domain AACI_RS00985 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AACI_RS00990 PF07228 Stage II sporulation protein E (SpoIIE) AACI_RS00995 PF00092 von Willebrand factor type A domain AACI_RS01005 PF09179 TilS substrate binding domain AACI_RS01005 PF11734 TilS substrate C-terminal domain AACI_RS01005 PF01171 PP-loop family AACI_RS01010 PF00156 Phosphoribosyl transferase domain AACI_RS01015 PF01434 Peptidase family M41 AACI_RS01015 PF00004 ATPase family associated with various cellular activities (AAA) AACI_RS01015 PF17862 AAA+ lid domain AACI_RS01015 PF06480 FtsH Extracellular AACI_RS01030 PF00072 Response regulator receiver domain AACI_RS01035 PF01430 Hsp33 protein AACI_RS01040 PF00809 Pterin binding enzyme AACI_RS01045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AACI_RS01050 PF01381 Helix-turn-helix AACI_RS01055 PF01272 Transcription elongation factor, GreA/GreB, C-term AACI_RS01055 PF03449 Transcription elongation factor, N-terminal AACI_RS01060 PF00152 tRNA synthetases class II (D, K and N) AACI_RS01060 PF01336 OB-fold nucleic acid binding domain AACI_RS01085 PF05163 DinB family AACI_RS01090 PF02673 Bacitracin resistance protein BacA AACI_RS01095 PF07690 Major Facilitator Superfamily AACI_RS01100 PF00892 EamA-like transporter family AACI_RS01115 PF00155 Aminotransferase class I and II AACI_RS01120 PF00551 Formyl transferase AACI_RS01125 PF00698 Acyl transferase domain AACI_RS01125 PF02801 Beta-ketoacyl synthase, C-terminal domain AACI_RS01125 PF00107 Zinc-binding dehydrogenase AACI_RS01125 PF00109 Beta-ketoacyl synthase, N-terminal domain AACI_RS01125 PF14765 Polyketide synthase dehydratase AACI_RS01125 PF08240 Alcohol dehydrogenase GroES-like domain AACI_RS01125 PF16197 Ketoacyl-synthetase C-terminal extension AACI_RS01125 PF08659 KR domain AACI_RS01125 PF00550 Phosphopantetheine attachment site AACI_RS01130 PF02378 Phosphotransferase system, EIIC AACI_RS01130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AACI_RS01135 PF05043 Mga helix-turn-helix domain AACI_RS01135 PF00874 PRD domain AACI_RS01135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AACI_RS01135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AACI_RS01135 PF08279 HTH domain AACI_RS01140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AACI_RS01145 PF08125 Mannitol dehydrogenase C-terminal domain AACI_RS01145 PF01232 Mannitol dehydrogenase Rossmann domain AACI_RS01150 PF00381 PTS HPr component phosphorylation site AACI_RS01155 PF00391 PEP-utilising enzyme, mobile domain AACI_RS01155 PF05524 PEP-utilising enzyme, N-terminal AACI_RS01155 PF02896 PEP-utilising enzyme, TIM barrel domain AACI_RS01160 PF04545 Sigma-70, region 4 AACI_RS01160 PF04542 Sigma-70 region 2 AACI_RS01170 PF01425 Amidase AACI_RS01185 PF00005 ABC transporter AACI_RS01190 PF00005 ABC transporter AACI_RS01195 PF02632 BioY family AACI_RS01200 PF00563 EAL domain AACI_RS01200 PF00990 Diguanylate cyclase, GGDEF domain AACI_RS01200 PF03707 Bacterial signalling protein N terminal repeat AACI_RS01215 PF00581 Rhodanese-like domain AACI_RS01240 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AACI_RS01245 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AACI_RS01260 PF01717 Cobalamin-independent synthase, Catalytic domain AACI_RS01265 PF09286 Pro-kumamolisin, activation domain AACI_RS01265 PF00082 Subtilase family AACI_RS01270 PF00486 Transcriptional regulatory protein, C terminal AACI_RS01270 PF00072 Response regulator receiver domain AACI_RS01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS01275 PF13493 Domain of unknown function (DUF4118) AACI_RS01275 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS01275 PF02702 Osmosensitive K+ channel His kinase sensor domain AACI_RS01275 PF13492 GAF domain AACI_RS01280 PF03814 Potassium-transporting ATPase A subunit AACI_RS01290 PF02669 K+-transporting ATPase, c chain AACI_RS01295 PF02702 Osmosensitive K+ channel His kinase sensor domain AACI_RS01300 PF01522 Polysaccharide deacetylase AACI_RS01305 PF00248 Aldo/keto reductase family AACI_RS01310 PF07690 Major Facilitator Superfamily AACI_RS01315 PF01476 LysM domain AACI_RS01315 PF00704 Glycosyl hydrolases family 18 AACI_RS01320 PF13407 Periplasmic binding protein domain AACI_RS01325 PF00005 ABC transporter AACI_RS01330 PF02653 Branched-chain amino acid transport system / permease component AACI_RS01345 PF08502 LeuA allosteric (dimerisation) domain AACI_RS01345 PF00682 HMGL-like AACI_RS01350 PF00255 Glutathione peroxidase AACI_RS01455 PF09186 Domain of unknown function (DUF1949) AACI_RS01455 PF01205 Uncharacterized protein family UPF0029 AACI_RS01475 PF02397 Bacterial sugar transferase AACI_RS01480 PF00534 Glycosyl transferases group 1 AACI_RS01480 PF13439 Glycosyltransferase Family 4 AACI_RS01490 PF01061 ABC-2 type transporter AACI_RS01495 PF00005 ABC transporter AACI_RS01495 PF14524 Wzt C-terminal domain AACI_RS01515 PF00872 Transposase, Mutator family AACI_RS01530 PF12320 Type 5 capsule protein repressor C-terminal domain AACI_RS01530 PF00149 Calcineurin-like phosphoesterase AACI_RS01535 PF13476 AAA domain AACI_RS01545 PF00403 Heavy-metal-associated domain AACI_RS01550 PF13193 AMP-binding enzyme C-terminal domain AACI_RS01550 PF00501 AMP-binding enzyme AACI_RS01560 PF04542 Sigma-70 region 2 AACI_RS01560 PF04545 Sigma-70, region 4 AACI_RS01575 PF00902 Sec-independent protein translocase protein (TatC) AACI_RS01580 PF02416 mttA/Hcf106 family AACI_RS01585 PF01225 Mur ligase family, catalytic domain AACI_RS01585 PF02875 Mur ligase family, glutamate ligase domain AACI_RS01585 PF08245 Mur ligase middle domain AACI_RS01590 PF00905 Penicillin binding protein transpeptidase domain AACI_RS01590 PF03717 Penicillin-binding Protein dimerisation domain AACI_RS01610 PF02261 Aspartate decarboxylase AACI_RS01615 PF03447 Homoserine dehydrogenase, NAD binding domain AACI_RS01615 PF00742 Homoserine dehydrogenase AACI_RS01615 PF01842 ACT domain AACI_RS01625 PF00437 Type II/IV secretion system protein AACI_RS01625 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AACI_RS01630 PF00482 Type II secretion system (T2SS), protein F AACI_RS01635 PF07963 Prokaryotic N-terminal methylation motif AACI_RS01635 PF08334 Type II secretion system (T2SS), protein G AACI_RS01670 PF00437 Type II/IV secretion system protein AACI_RS01675 PF01478 Type IV leader peptidase family AACI_RS01675 PF06750 Bacterial Peptidase A24 N-terminal domain AACI_RS01680 PF00270 DEAD/DEAH box helicase AACI_RS01680 PF00271 Helicase conserved C-terminal domain AACI_RS01680 PF09369 Domain of unknown function (DUF1998) AACI_RS01690 PF00158 Sigma-54 interaction domain AACI_RS01690 PF13426 PAS domain AACI_RS01690 PF02954 Bacterial regulatory protein, Fis family AACI_RS01695 PF00202 Aminotransferase class-III AACI_RS01700 PF00171 Aldehyde dehydrogenase family AACI_RS01725 PF00491 Arginase family AACI_RS01730 PF00202 Aminotransferase class-III AACI_RS01735 PF00171 Aldehyde dehydrogenase family AACI_RS01740 PF00158 Sigma-54 interaction domain AACI_RS01740 PF02954 Bacterial regulatory protein, Fis family AACI_RS01740 PF13426 PAS domain AACI_RS01745 PF00324 Amino acid permease AACI_RS01750 PF00309 Sigma-54 factor, Activator interacting domain (AID) AACI_RS01750 PF04963 Sigma-54 factor, core binding domain AACI_RS01750 PF04552 Sigma-54, DNA binding domain AACI_RS01770 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain AACI_RS01770 PF17890 Peptidoglycan hydrolase LytB WW-like domain AACI_RS01770 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AACI_RS01770 PF01473 Putative cell wall binding repeat AACI_RS01780 PF00933 Glycosyl hydrolase family 3 N terminal domain AACI_RS01780 PF14310 Fibronectin type III-like domain AACI_RS01780 PF01915 Glycosyl hydrolase family 3 C-terminal domain AACI_RS01785 PF01613 Flavin reductase like domain AACI_RS01790 PF07690 Major Facilitator Superfamily AACI_RS01795 PF00392 Bacterial regulatory proteins, gntR family AACI_RS01800 PF01557 Fumarylacetoacetate (FAA) hydrolase family AACI_RS01805 PF00171 Aldehyde dehydrogenase family AACI_RS01810 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AACI_RS01810 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AACI_RS01815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AACI_RS01820 PF00701 Dihydrodipicolinate synthetase family AACI_RS01825 PF00199 Catalase AACI_RS01825 PF06628 Catalase-related immune-responsive AACI_RS01830 PF03176 MMPL family AACI_RS01835 PF07301 Protein of unknown function (DUF1453) AACI_RS01840 PF00768 D-alanyl-D-alanine carboxypeptidase AACI_RS01845 PF00905 Penicillin binding protein transpeptidase domain AACI_RS01845 PF00912 Transglycosylase AACI_RS01850 PF01050 Mannose-6-phosphate isomerase AACI_RS01850 PF00483 Nucleotidyl transferase AACI_RS01860 PF01751 Toprim domain AACI_RS01865 PF00557 Metallopeptidase family M24 AACI_RS01880 PF01648 4'-phosphopantetheinyl transferase superfamily AACI_RS01885 PF01256 Carbohydrate kinase AACI_RS01885 PF03853 YjeF-related protein N-terminus AACI_RS01895 PF00842 Alanine racemase, C-terminal domain AACI_RS01895 PF01168 Alanine racemase, N-terminal domain AACI_RS01905 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AACI_RS01910 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AACI_RS01910 PF05221 S-adenosyl-L-homocysteine hydrolase AACI_RS01915 PF07722 Peptidase C26 AACI_RS01920 PF00672 HAMP domain AACI_RS01920 PF01966 HD domain AACI_RS01935 PF07293 Protein of unknown function (DUF1450) AACI_RS01945 PF02769 AIR synthase related protein, C-terminal domain AACI_RS01945 PF00586 AIR synthase related protein, N-terminal domain AACI_RS01950 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AACI_RS01955 PF00814 Glycoprotease family AACI_RS01960 PF00583 Acetyltransferase (GNAT) family AACI_RS01965 PF00814 Glycoprotease family AACI_RS01970 PF12848 ABC transporter AACI_RS01970 PF16326 ABC transporter C-terminal domain AACI_RS01970 PF00005 ABC transporter AACI_RS01975 PF01569 PAP2 superfamily AACI_RS01980 PF01812 5-formyltetrahydrofolate cyclo-ligase family AACI_RS01990 PF02464 Competence-damaged protein AACI_RS01990 PF18146 Damage-inducible protein CinA KH domain AACI_RS01990 PF00994 Probable molybdopterin binding domain AACI_RS01995 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AACI_RS02000 PF00166 Chaperonin 10 Kd subunit AACI_RS02005 PF00118 TCP-1/cpn60 chaperonin family AACI_RS02020 PF00753 Metallo-beta-lactamase superfamily AACI_RS02025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS02025 PF07730 Histidine kinase AACI_RS02030 PF00196 Bacterial regulatory proteins, luxR family AACI_RS02030 PF00072 Response regulator receiver domain AACI_RS02040 PF17863 AAA lid domain AACI_RS02040 PF07726 ATPase family associated with various cellular activities (AAA) AACI_RS02050 PF01841 Transglutaminase-like superfamily AACI_RS02050 PF13559 Domain of unknown function (DUF4129) AACI_RS02050 PF11992 Domain of unknown function (DUF3488) AACI_RS02055 PF00753 Metallo-beta-lactamase superfamily AACI_RS02055 PF16123 Hydroxyacylglutathione hydrolase C-terminus AACI_RS02065 PF00958 GMP synthase C terminal domain AACI_RS02065 PF00117 Glutamine amidotransferase class-I AACI_RS02065 PF02540 NAD synthase AACI_RS02070 PF10397 Adenylosuccinate lyase C-terminus AACI_RS02070 PF00206 Lyase AACI_RS02075 PF01259 SAICAR synthetase AACI_RS02080 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AACI_RS02090 PF02769 AIR synthase related protein, C-terminal domain AACI_RS02090 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AACI_RS02090 PF00586 AIR synthase related protein, N-terminal domain AACI_RS02095 PF00156 Phosphoribosyl transferase domain AACI_RS02100 PF00586 AIR synthase related protein, N-terminal domain AACI_RS02100 PF02769 AIR synthase related protein, C-terminal domain AACI_RS02105 PF02142 MGS-like domain AACI_RS02105 PF01808 AICARFT/IMPCHase bienzyme AACI_RS02110 PF02844 Phosphoribosylglycinamide synthetase, N domain AACI_RS02110 PF02843 Phosphoribosylglycinamide synthetase, C domain AACI_RS02110 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AACI_RS02135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AACI_RS02140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AACI_RS02140 PF13378 Enolase C-terminal domain-like AACI_RS02145 PF00005 ABC transporter AACI_RS02150 PF18075 FtsX extracellular domain AACI_RS02150 PF02687 FtsX-like permease family AACI_RS02155 PF17820 PDZ domain AACI_RS02160 PF01618 MotA/TolQ/ExbB proton channel family AACI_RS02165 PF00691 OmpA family AACI_RS02165 PF13677 Membrane MotB of proton-channel complex MotA/MotB AACI_RS02170 PF17757 UvrB interaction domain AACI_RS02170 PF12344 Ultra-violet resistance protein B AACI_RS02170 PF02151 UvrB/uvrC motif AACI_RS02170 PF00271 Helicase conserved C-terminal domain AACI_RS02170 PF04851 Type III restriction enzyme, res subunit AACI_RS02175 PF00005 ABC transporter AACI_RS02175 PF17755 UvrA DNA-binding domain AACI_RS02175 PF17760 UvrA interaction domain AACI_RS02180 PF02603 HPr Serine kinase N terminus AACI_RS02180 PF07475 HPr Serine kinase C-terminal domain AACI_RS02185 PF03485 Arginyl tRNA synthetase N terminal domain AACI_RS02185 PF05746 DALR anticodon binding domain AACI_RS02185 PF00750 tRNA synthetases class I (R) AACI_RS02195 PF00300 Histidine phosphatase superfamily (branch 1) AACI_RS02195 PF00293 NUDIX domain AACI_RS02200 PF03668 P-loop ATPase protein family AACI_RS02205 PF01933 Uncharacterised protein family UPF0052 AACI_RS02210 PF10298 WhiA N-terminal LAGLIDADG-like domain AACI_RS02210 PF14527 WhiA LAGLIDADG-like domain AACI_RS02210 PF02650 WhiA C-terminal HTH domain AACI_RS02215 PF00381 PTS HPr component phosphorylation site AACI_RS02235 PF00730 HhH-GPD superfamily base excision DNA repair protein AACI_RS02235 PF14815 NUDIX domain AACI_RS02235 PF00633 Helix-hairpin-helix motif AACI_RS02240 PF01027 Inhibitor of apoptosis-promoting Bax1 AACI_RS02245 PF09334 tRNA synthetases class I (M) AACI_RS02245 PF13603 Leucyl-tRNA synthetase, Domain 2 AACI_RS02245 PF00133 tRNA synthetases class I (I, L, M and V) AACI_RS02245 PF08264 Anticodon-binding domain of tRNA AACI_RS02250 PF07729 FCD domain AACI_RS02250 PF00392 Bacterial regulatory proteins, gntR family AACI_RS02265 PF01594 AI-2E family transporter AACI_RS02280 PF00271 Helicase conserved C-terminal domain AACI_RS02280 PF09369 Domain of unknown function (DUF1998) AACI_RS02280 PF00270 DEAD/DEAH box helicase AACI_RS02290 PF06335 Protein of unknown function (DUF1054) AACI_RS02295 PF02872 5'-nucleotidase, C-terminal domain AACI_RS02295 PF00149 Calcineurin-like phosphoesterase AACI_RS02300 PF00633 Helix-hairpin-helix motif AACI_RS02300 PF00730 HhH-GPD superfamily base excision DNA repair protein AACI_RS02300 PF10576 Iron-sulfur binding domain of endonuclease III AACI_RS02310 PF03323 Bacillus/Clostridium GerA spore germination protein AACI_RS02320 PF00465 Iron-containing alcohol dehydrogenase AACI_RS02325 PF00171 Aldehyde dehydrogenase family AACI_RS02330 PF07690 Major Facilitator Superfamily AACI_RS02335 PF00158 Sigma-54 interaction domain AACI_RS02335 PF13426 PAS domain AACI_RS02335 PF02954 Bacterial regulatory protein, Fis family AACI_RS02340 PF00501 AMP-binding enzyme AACI_RS02340 PF13193 AMP-binding enzyme C-terminal domain AACI_RS02345 PF00075 RNase H AACI_RS02350 PF08331 Domain of unknown function (DUF1730) AACI_RS02355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AACI_RS02355 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AACI_RS02365 PF00180 Isocitrate/isopropylmalate dehydrogenase AACI_RS02370 PF09339 IclR helix-turn-helix domain AACI_RS02370 PF01614 Bacterial transcriptional regulator AACI_RS02375 PF12671 Putative amidase domain AACI_RS02380 PF00588 SpoU rRNA Methylase family AACI_RS02385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AACI_RS02385 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACI_RS02390 PF00364 Biotin-requiring enzyme AACI_RS02390 PF02817 e3 binding domain AACI_RS02390 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AACI_RS02395 PF02780 Transketolase, C-terminal domain AACI_RS02395 PF02779 Transketolase, pyrimidine binding domain AACI_RS02400 PF00676 Dehydrogenase E1 component AACI_RS02410 PF00135 Carboxylesterase family AACI_RS02415 PF08298 PrkA AAA domain AACI_RS02415 PF06798 PrkA serine protein kinase C-terminal domain AACI_RS02420 PF04285 Protein of unknown function (DUF444) AACI_RS02425 PF04293 SpoVR like protein AACI_RS02430 PF07508 Recombinase AACI_RS02430 PF13408 Recombinase zinc beta ribbon domain AACI_RS02430 PF00239 Resolvase, N terminal domain AACI_RS02435 PF01381 Helix-turn-helix AACI_RS02505 PF02768 DNA polymerase III beta subunit, C-terminal domain AACI_RS02505 PF02767 DNA polymerase III beta subunit, central domain AACI_RS02505 PF00712 DNA polymerase III beta subunit, N-terminal domain AACI_RS02560 PF02224 Cytidylate kinase AACI_RS02570 PF00929 Exonuclease AACI_RS02605 PF01695 IstB-like ATP binding protein AACI_RS02615 PF00872 Transposase, Mutator family AACI_RS02630 PF06481 COX Aromatic Rich Motif AACI_RS02630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AACI_RS02635 PF00115 Cytochrome C and Quinol oxidase polypeptide I AACI_RS02640 PF00510 Cytochrome c oxidase subunit III AACI_RS02645 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AACI_RS02650 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS02650 PF13188 PAS domain AACI_RS02650 PF00989 PAS fold AACI_RS02650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS02650 PF13426 PAS domain AACI_RS02655 PF00196 Bacterial regulatory proteins, luxR family AACI_RS02655 PF00072 Response regulator receiver domain AACI_RS02690 PF11849 Domain of unknown function (DUF3369) AACI_RS02695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACI_RS02695 PF00672 HAMP domain AACI_RS02700 PF00582 Universal stress protein family AACI_RS02735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AACI_RS02740 PF02040 Arsenical pump membrane protein AACI_RS02745 PF01451 Low molecular weight phosphotyrosine protein phosphatase AACI_RS02750 PF00583 Acetyltransferase (GNAT) family AACI_RS02755 PF02086 D12 class N6 adenine-specific DNA methyltransferase AACI_RS02770 PF04542 Sigma-70 region 2 AACI_RS02770 PF08281 Sigma-70, region 4 AACI_RS02875 PF00145 C-5 cytosine-specific DNA methylase AACI_RS02930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AACI_RS02940 PF00437 Type II/IV secretion system protein AACI_RS03055 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AACI_RS03060 PF01850 PIN domain AACI_RS03135 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AACI_RS03135 PF18277 AbrB C-terminal domain AACI_RS03145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AACI_RS03145 PF03466 LysR substrate binding domain AACI_RS03170 PF04293 SpoVR like protein AACI_RS03210 PF03458 UPF0126 domain AACI_RS03220 PF00672 HAMP domain AACI_RS03220 PF17154 Gammaproteobacterial periplasmic sensor domain AACI_RS03220 PF00990 Diguanylate cyclase, GGDEF domain AACI_RS03220 PF00563 EAL domain AACI_RS03245 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AACI_RS03250 PF00873 AcrB/AcrD/AcrF family AACI_RS03260 PF00005 ABC transporter AACI_RS03270 PF00005 ABC transporter AACI_RS03275 PF00392 Bacterial regulatory proteins, gntR family AACI_RS03280 PF12706 Beta-lactamase superfamily domain AACI_RS03280 PF00753 Metallo-beta-lactamase superfamily AACI_RS03285 PF07690 Major Facilitator Superfamily AACI_RS03290 PF01047 MarR family AACI_RS03295 PF03471 Transporter associated domain AACI_RS03295 PF00999 Sodium/hydrogen exchanger family AACI_RS03295 PF02080 TrkA-C domain AACI_RS03305 PF00005 ABC transporter AACI_RS03315 PF07730 Histidine kinase AACI_RS03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS03320 PF00196 Bacterial regulatory proteins, luxR family AACI_RS03320 PF00072 Response regulator receiver domain AACI_RS03335 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AACI_RS03340 PF00115 Cytochrome C and Quinol oxidase polypeptide I AACI_RS03345 PF00510 Cytochrome c oxidase subunit III AACI_RS03350 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AACI_RS03355 PF02628 Cytochrome oxidase assembly protein AACI_RS03360 PF00768 D-alanyl-D-alanine carboxypeptidase AACI_RS03360 PF07943 Penicillin-binding protein 5, C-terminal domain AACI_RS03365 PF01596 O-methyltransferase AACI_RS03380 PF00248 Aldo/keto reductase family AACI_RS03385 PF00465 Iron-containing alcohol dehydrogenase AACI_RS03410 PF01339 CheB methylesterase AACI_RS03410 PF01739 CheR methyltransferase, SAM binding domain AACI_RS03410 PF03705 CheR methyltransferase, all-alpha domain AACI_RS03410 PF08448 PAS fold AACI_RS03425 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS03425 PF00672 HAMP domain AACI_RS03445 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AACI_RS03450 PF13302 Acetyltransferase (GNAT) domain AACI_RS03455 PF13361 UvrD-like helicase C-terminal domain AACI_RS03455 PF00580 UvrD/REP helicase N-terminal domain AACI_RS03460 PF12826 Helix-hairpin-helix motif AACI_RS03460 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AACI_RS03460 PF01653 NAD-dependent DNA ligase adenylation domain AACI_RS03460 PF00533 BRCA1 C Terminus (BRCT) domain AACI_RS03460 PF03120 NAD-dependent DNA ligase OB-fold domain AACI_RS03470 PF02686 Glu-tRNAGln amidotransferase C subunit AACI_RS03475 PF01425 Amidase AACI_RS03480 PF02934 GatB/GatE catalytic domain AACI_RS03480 PF02637 GatB domain AACI_RS03485 PF01938 TRAM domain AACI_RS03485 PF05958 tRNA (Uracil-5-)-methyltransferase AACI_RS03490 PF13026 Protein of unknown function (DUF3887) AACI_RS03490 PF12146 Serine aminopeptidase, S33 AACI_RS03510 PF00072 Response regulator receiver domain AACI_RS03510 PF00486 Transcriptional regulatory protein, C terminal AACI_RS03520 PF00498 FHA domain AACI_RS03520 PF01061 ABC-2 type transporter AACI_RS03520 PF00005 ABC transporter AACI_RS03535 PF00999 Sodium/hydrogen exchanger family AACI_RS03540 PF00210 Ferritin-like domain AACI_RS03545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AACI_RS03545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AACI_RS03550 PF00596 Class II Aldolase and Adducin N-terminal domain AACI_RS03555 PF01261 Xylose isomerase-like TIM barrel AACI_RS03560 PF00005 ABC transporter AACI_RS03565 PF02653 Branched-chain amino acid transport system / permease component AACI_RS03570 PF02653 Branched-chain amino acid transport system / permease component AACI_RS03575 PF13407 Periplasmic binding protein domain AACI_RS03580 PF08220 DeoR-like helix-turn-helix domain AACI_RS03580 PF00455 DeoR C terminal sensor domain AACI_RS03585 PF02589 LUD domain AACI_RS03595 PF02589 LUD domain AACI_RS03595 PF11870 Domain of unknown function (DUF3390) AACI_RS03595 PF13183 4Fe-4S dicluster domain AACI_RS03600 PF02754 Cysteine-rich domain AACI_RS03610 PF04239 Protein of unknown function (DUF421) AACI_RS03615 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AACI_RS03620 PF07451 Stage V sporulation protein AD (SpoVAD) AACI_RS03625 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AACI_RS03630 PF01757 Acyltransferase family AACI_RS03635 PF02615 Malate/L-lactate dehydrogenase AACI_RS03655 PF13193 AMP-binding enzyme C-terminal domain AACI_RS03655 PF00501 AMP-binding enzyme AACI_RS03660 PF00639 PPIC-type PPIASE domain AACI_RS03665 PF00083 Sugar (and other) transporter AACI_RS03670 PF04070 Domain of unknown function (DUF378) AACI_RS03675 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AACI_RS03675 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AACI_RS03680 PF05683 Fumarase C-terminus AACI_RS03680 PF05681 Fumarate hydratase (Fumerase) AACI_RS03690 PF01566 Natural resistance-associated macrophage protein AACI_RS03700 PF02885 Glycosyl transferase family, helical bundle domain AACI_RS03700 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AACI_RS03700 PF00591 Glycosyl transferase family, a/b domain AACI_RS03705 PF08439 Oligopeptidase F AACI_RS03705 PF01432 Peptidase family M3 AACI_RS03710 PF13188 PAS domain AACI_RS03710 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS03710 PF00989 PAS fold AACI_RS03710 PF13426 PAS domain AACI_RS03715 PF01488 Shikimate / quinate 5-dehydrogenase AACI_RS03715 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AACI_RS03715 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AACI_RS03720 PF00162 Phosphoglycerate kinase AACI_RS03725 PF00121 Triosephosphate isomerase AACI_RS03730 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AACI_RS03730 PF01676 Metalloenzyme superfamily AACI_RS03735 PF00113 Enolase, C-terminal TIM barrel domain AACI_RS03735 PF03952 Enolase, N-terminal domain AACI_RS03740 PF03840 Preprotein translocase SecG subunit AACI_RS03745 PF07690 Major Facilitator Superfamily AACI_RS03750 PF00773 RNB domain AACI_RS03750 PF17876 Cold shock domain AACI_RS03750 PF00575 S1 RNA binding domain AACI_RS03750 PF08206 Ribonuclease B OB domain AACI_RS03755 PF01668 SmpB protein AACI_RS03760 PF00171 Aldehyde dehydrogenase family AACI_RS03765 PF10057 Uncharacterized conserved protein (DUF2294) AACI_RS03770 PF00361 Proton-conducting membrane transporter AACI_RS03770 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AACI_RS03775 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AACI_RS03785 PF00534 Glycosyl transferases group 1 AACI_RS03805 PF08241 Methyltransferase domain AACI_RS03815 PF01717 Cobalamin-independent synthase, Catalytic domain AACI_RS03815 PF08267 Cobalamin-independent synthase, N-terminal domain AACI_RS03820 PF00296 Luciferase-like monooxygenase AACI_RS03825 PF01613 Flavin reductase like domain AACI_RS03840 PF09347 Domain of unknown function (DUF1989) AACI_RS03845 PF00289 Biotin carboxylase, N-terminal domain AACI_RS03845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AACI_RS03845 PF02785 Biotin carboxylase C-terminal domain AACI_RS03850 PF01425 Amidase AACI_RS03855 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS03860 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS03865 PF01547 Bacterial extracellular solute-binding protein AACI_RS03880 PF03069 Acetamidase/Formamidase family AACI_RS03895 PF10502 Signal peptidase, peptidase S26 AACI_RS03900 PF00248 Aldo/keto reductase family AACI_RS03905 PF00009 Elongation factor Tu GTP binding domain AACI_RS03905 PF03144 Elongation factor Tu domain 2 AACI_RS03905 PF16658 Class II release factor RF3, C-terminal domain AACI_RS03930 PF01370 NAD dependent epimerase/dehydratase family AACI_RS03935 PF16875 Glycosyl hydrolase family 36 N-terminal domain AACI_RS03935 PF16874 Glycosyl hydrolase family 36 C-terminal domain AACI_RS03940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AACI_RS03940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AACI_RS03960 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AACI_RS03960 PF10091 Putative glucoamylase AACI_RS03960 PF06165 Glycosyltransferase family 36 AACI_RS03965 PF00083 Sugar (and other) transporter AACI_RS03970 PF00356 Bacterial regulatory proteins, lacI family AACI_RS03975 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS03985 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS03990 PF02056 Family 4 glycosyl hydrolase AACI_RS03990 PF11975 Family 4 glycosyl hydrolase C-terminal domain AACI_RS03995 PF00285 Citrate synthase, C-terminal domain AACI_RS04000 PF03972 MmgE/PrpD family AACI_RS04010 PF13291 ACT domain AACI_RS04010 PF00291 Pyridoxal-phosphate dependent enzyme AACI_RS04025 PF07724 AAA domain (Cdc48 subfamily) AACI_RS04025 PF00004 ATPase family associated with various cellular activities (AAA) AACI_RS04025 PF10431 C-terminal, D2-small domain, of ClpB protein AACI_RS04025 PF17871 AAA lid domain AACI_RS04035 PF00440 Bacterial regulatory proteins, tetR family AACI_RS04035 PF17932 Tetracyclin repressor-like, C-terminal domain AACI_RS04040 PF05138 Phenylacetic acid catabolic protein AACI_RS04055 PF01883 Iron-sulfur cluster assembly protein AACI_RS04060 PF14535 AMP-binding enzyme C-terminal domain AACI_RS04060 PF00501 AMP-binding enzyme AACI_RS04075 PF00171 Aldehyde dehydrogenase family AACI_RS04080 PF00378 Enoyl-CoA hydratase/isomerase AACI_RS04085 PF00108 Thiolase, N-terminal domain AACI_RS04085 PF02803 Thiolase, C-terminal domain AACI_RS04090 PF02646 RmuC family AACI_RS04095 PF14168 YjzC-like protein AACI_RS04100 PF04172 LrgB-like family AACI_RS04105 PF03788 LrgA family AACI_RS04110 PF03466 LysR substrate binding domain AACI_RS04110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AACI_RS04120 PF04299 Putative FMN-binding domain AACI_RS04125 PF00155 Aminotransferase class I and II AACI_RS04130 PF00676 Dehydrogenase E1 component AACI_RS04135 PF02780 Transketolase, C-terminal domain AACI_RS04135 PF02779 Transketolase, pyrimidine binding domain AACI_RS04140 PF00364 Biotin-requiring enzyme AACI_RS04140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AACI_RS04140 PF02817 e3 binding domain AACI_RS04145 PF00378 Enoyl-CoA hydratase/isomerase AACI_RS04150 PF00892 EamA-like transporter family AACI_RS04155 PF05977 Transmembrane secretion effector AACI_RS04160 PF00107 Zinc-binding dehydrogenase AACI_RS04160 PF08240 Alcohol dehydrogenase GroES-like domain AACI_RS04165 PF00005 ABC transporter AACI_RS04165 PF00664 ABC transporter transmembrane region AACI_RS04170 PF00005 ABC transporter AACI_RS04170 PF00664 ABC transporter transmembrane region AACI_RS04175 PF08240 Alcohol dehydrogenase GroES-like domain AACI_RS04175 PF00107 Zinc-binding dehydrogenase AACI_RS04180 PF00326 Prolyl oligopeptidase family AACI_RS04180 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AACI_RS04185 PF00664 ABC transporter transmembrane region AACI_RS04185 PF00005 ABC transporter AACI_RS04190 PF00005 ABC transporter AACI_RS04190 PF00664 ABC transporter transmembrane region AACI_RS04205 PF10057 Uncharacterized conserved protein (DUF2294) AACI_RS04210 PF01226 Formate/nitrite transporter AACI_RS04215 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AACI_RS04215 PF12838 4Fe-4S dicluster domain AACI_RS04215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AACI_RS04215 PF00384 Molybdopterin oxidoreductase AACI_RS04215 PF01568 Molydopterin dinucleotide binding domain AACI_RS04225 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACI_RS04235 PF00248 Aldo/keto reductase family AACI_RS04240 PF00682 HMGL-like AACI_RS04240 PF08502 LeuA allosteric (dimerisation) domain AACI_RS04245 PF07690 Major Facilitator Superfamily AACI_RS04250 PF00155 Aminotransferase class I and II AACI_RS04285 PF03352 Methyladenine glycosylase AACI_RS04285 PF13673 Acetyltransferase (GNAT) domain AACI_RS04285 PF13302 Acetyltransferase (GNAT) domain AACI_RS04285 PF00117 Glutamine amidotransferase class-I AACI_RS04285 PF00958 GMP synthase C terminal domain AACI_RS04290 PF00085 Thioredoxin AACI_RS04295 PF01625 Peptide methionine sulfoxide reductase AACI_RS04300 PF00005 ABC transporter AACI_RS04305 PF04264 YceI-like domain AACI_RS04310 PF01638 HxlR-like helix-turn-helix AACI_RS04315 PF01979 Amidohydrolase family AACI_RS04320 PF14306 PUA-like domain AACI_RS04320 PF01747 ATP-sulfurylase AACI_RS04325 PF01047 MarR family AACI_RS04335 PF00749 tRNA synthetases class I (E and Q), catalytic domain AACI_RS04340 PF00171 Aldehyde dehydrogenase family AACI_RS04345 PF00248 Aldo/keto reductase family AACI_RS04350 PF02390 Putative methyltransferase AACI_RS04355 PF00857 Isochorismatase family AACI_RS04370 PF07690 Major Facilitator Superfamily AACI_RS04375 PF13538 UvrD-like helicase C-terminal domain AACI_RS04380 PF12833 Helix-turn-helix domain AACI_RS04385 PF07690 Major Facilitator Superfamily AACI_RS04390 PF13673 Acetyltransferase (GNAT) domain AACI_RS04400 PF08830 Protein of unknown function (DUF1806) AACI_RS04405 PF02585 GlcNAc-PI de-N-acetylase AACI_RS04410 PF01451 Low molecular weight phosphotyrosine protein phosphatase AACI_RS04420 PF00085 Thioredoxin AACI_RS04425 PF00583 Acetyltransferase (GNAT) family AACI_RS04425 PF13380 CoA binding domain AACI_RS04425 PF13607 Succinyl-CoA ligase like flavodoxin domain AACI_RS04430 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACI_RS04440 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AACI_RS04445 PF08220 DeoR-like helix-turn-helix domain AACI_RS04445 PF00455 DeoR C terminal sensor domain AACI_RS04450 PF00294 pfkB family carbohydrate kinase AACI_RS04455 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AACI_RS04455 PF02378 Phosphotransferase system, EIIC AACI_RS04465 PF01425 Amidase AACI_RS04470 PF04241 Protein of unknown function (DUF423) AACI_RS04475 PF00892 EamA-like transporter family AACI_RS04480 PF00326 Prolyl oligopeptidase family AACI_RS04485 PF08818 Domain of unknown function (DU1801) AACI_RS04495 PF01053 Cys/Met metabolism PLP-dependent enzyme AACI_RS04505 PF00676 Dehydrogenase E1 component AACI_RS04510 PF02779 Transketolase, pyrimidine binding domain AACI_RS04510 PF02780 Transketolase, C-terminal domain AACI_RS04515 PF00501 AMP-binding enzyme AACI_RS04515 PF13193 AMP-binding enzyme C-terminal domain AACI_RS04520 PF01070 FMN-dependent dehydrogenase AACI_RS04525 PF02545 Maf-like protein AACI_RS04545 PF00465 Iron-containing alcohol dehydrogenase AACI_RS04555 PF00356 Bacterial regulatory proteins, lacI family AACI_RS04570 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS04575 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS04580 PF00694 Aconitase C-terminal domain AACI_RS04580 PF00330 Aconitase family (aconitate hydratase) AACI_RS04585 PF00953 Glycosyl transferase family 4 AACI_RS04590 PF01040 UbiA prenyltransferase family AACI_RS04595 PF08240 Alcohol dehydrogenase GroES-like domain AACI_RS04595 PF00107 Zinc-binding dehydrogenase AACI_RS04600 PF08240 Alcohol dehydrogenase GroES-like domain AACI_RS04600 PF00107 Zinc-binding dehydrogenase AACI_RS04605 PF04551 GcpE protein AACI_RS04610 PF01476 LysM domain AACI_RS04610 PF04972 BON domain AACI_RS04615 PF13393 Histidyl-tRNA synthetase AACI_RS04620 PF01634 ATP phosphoribosyltransferase AACI_RS04625 PF00815 Histidinol dehydrogenase AACI_RS04630 PF00475 Imidazoleglycerol-phosphate dehydratase AACI_RS04635 PF00117 Glutamine amidotransferase class-I AACI_RS04640 PF00977 Histidine biosynthesis protein AACI_RS04645 PF00977 Histidine biosynthesis protein AACI_RS04650 PF01502 Phosphoribosyl-AMP cyclohydrolase AACI_RS04650 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AACI_RS04665 PF08240 Alcohol dehydrogenase GroES-like domain AACI_RS04665 PF00107 Zinc-binding dehydrogenase AACI_RS04675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AACI_RS04675 PF01872 RibD C-terminal domain AACI_RS04680 PF00677 Lumazine binding domain AACI_RS04685 PF00925 GTP cyclohydrolase II AACI_RS04685 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AACI_RS04690 PF00885 6,7-dimethyl-8-ribityllumazine synthase AACI_RS04695 PF00313 'Cold-shock' DNA-binding domain AACI_RS04715 PF09819 ABC-type cobalt transport system, permease component AACI_RS04720 PF00005 ABC transporter AACI_RS04725 PF02779 Transketolase, pyrimidine binding domain AACI_RS04725 PF02780 Transketolase, C-terminal domain AACI_RS04725 PF00456 Transketolase, thiamine diphosphate binding domain AACI_RS04730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AACI_RS04730 PF03466 LysR substrate binding domain AACI_RS04750 PF00106 short chain dehydrogenase AACI_RS04755 PF00581 Rhodanese-like domain AACI_RS04765 PF02585 GlcNAc-PI de-N-acetylase AACI_RS04770 PF02770 Acyl-CoA dehydrogenase, middle domain AACI_RS04770 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AACI_RS04770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACI_RS04780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AACI_RS04790 PF13361 UvrD-like helicase C-terminal domain AACI_RS04790 PF00580 UvrD/REP helicase N-terminal domain AACI_RS04810 PF00849 RNA pseudouridylate synthase AACI_RS04810 PF01479 S4 domain AACI_RS04815 PF03631 Virulence factor BrkB AACI_RS04820 PF02152 Dihydroneopterin aldolase AACI_RS04825 PF10776 Protein of unknown function (DUF2600) AACI_RS04835 PF01926 50S ribosome-binding GTPase AACI_RS04835 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AACI_RS04840 PF00350 Dynamin family AACI_RS04845 PF13180 PDZ domain AACI_RS04850 PF04542 Sigma-70 region 2 AACI_RS04850 PF04545 Sigma-70, region 4 AACI_RS04855 PF09335 SNARE associated Golgi protein AACI_RS04860 PF02796 Helix-turn-helix domain of resolvase AACI_RS04860 PF00239 Resolvase, N terminal domain AACI_RS04875 PF01227 GTP cyclohydrolase I AACI_RS04885 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AACI_RS04885 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AACI_RS04895 PF01180 Dihydroorotate dehydrogenase AACI_RS04910 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AACI_RS04910 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AACI_RS04915 PF01883 Iron-sulfur cluster assembly protein AACI_RS04920 PF00005 ABC transporter AACI_RS04925 PF01458 Uncharacterized protein family (UPF0051) AACI_RS04930 PF00266 Aminotransferase class-V AACI_RS04935 PF01592 NifU-like N terminal domain AACI_RS04940 PF01458 Uncharacterized protein family (UPF0051) AACI_RS04945 PF00355 Rieske [2Fe-2S] domain AACI_RS04950 PF02082 Transcriptional regulator AACI_RS04965 PF00459 Inositol monophosphatase family AACI_RS04970 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AACI_RS04970 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AACI_RS04970 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AACI_RS04975 PF02401 LytB protein AACI_RS04985 PF13520 Amino acid permease AACI_RS04990 PF01321 Creatinase/Prolidase N-terminal domain AACI_RS04990 PF00557 Metallopeptidase family M24 AACI_RS05005 PF14034 Sporulation protein YtrH AACI_RS05010 PF00176 SNF2 family N-terminal domain AACI_RS05010 PF12419 SNF2 Helicase protein AACI_RS05010 PF00271 Helicase conserved C-terminal domain AACI_RS05030 PF14579 Helix-hairpin-helix motif AACI_RS05030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AACI_RS05030 PF07733 Bacterial DNA polymerase III alpha NTPase domain AACI_RS05030 PF02811 PHP domain AACI_RS05040 PF01569 PAP2 superfamily AACI_RS05055 PF01230 HIT domain AACI_RS05060 PF01063 Amino-transferase class IV AACI_RS05070 PF01261 Xylose isomerase-like TIM barrel AACI_RS05075 PF07690 Major Facilitator Superfamily AACI_RS05080 PF05193 Peptidase M16 inactive domain AACI_RS05085 PF00675 Insulinase (Peptidase family M16) AACI_RS05085 PF05193 Peptidase M16 inactive domain AACI_RS05090 PF12706 Beta-lactamase superfamily domain AACI_RS05095 PF00291 Pyridoxal-phosphate dependent enzyme AACI_RS05100 PF00288 GHMP kinases N terminal domain AACI_RS05100 PF08544 GHMP kinases C terminal AACI_RS05105 PF03061 Thioesterase superfamily AACI_RS05115 PF07685 CobB/CobQ-like glutamine amidotransferase domain AACI_RS05120 PF08245 Mur ligase middle domain AACI_RS05120 PF08353 Domain of unknown function (DUF1727) AACI_RS05140 PF01098 Cell cycle protein AACI_RS05150 PF03009 Glycerophosphoryl diester phosphodiesterase family AACI_RS05155 PF01098 Cell cycle protein AACI_RS05160 PF00155 Aminotransferase class I and II AACI_RS05175 PF08741 YwhD family AACI_RS05180 PF01276 Orn/Lys/Arg decarboxylase, major domain AACI_RS05180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AACI_RS05185 PF00578 AhpC/TSA family AACI_RS05190 PF01521 Iron-sulphur cluster biosynthesis AACI_RS05195 PF01966 HD domain AACI_RS05200 PF09335 SNARE associated Golgi protein AACI_RS05205 PF08827 Domain of unknown function (DUF1805) AACI_RS05210 PF05343 M42 glutamyl aminopeptidase AACI_RS05215 PF02681 Divergent PAP2 family AACI_RS05220 PF00293 NUDIX domain AACI_RS05230 PF06725 3D domain AACI_RS05230 PF01476 LysM domain AACI_RS05270 PF07859 alpha/beta hydrolase fold AACI_RS05280 PF00171 Aldehyde dehydrogenase family AACI_RS05285 PF08141 Small acid-soluble spore protein H family AACI_RS05290 PF03060 Nitronate monooxygenase AACI_RS05300 PF03060 Nitronate monooxygenase AACI_RS05305 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AACI_RS05305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AACI_RS05430 PF00712 DNA polymerase III beta subunit, N-terminal domain AACI_RS05430 PF02767 DNA polymerase III beta subunit, central domain AACI_RS05430 PF02768 DNA polymerase III beta subunit, C-terminal domain AACI_RS05475 PF01202 Shikimate kinase AACI_RS05480 PF00929 Exonuclease AACI_RS05490 PF00654 Voltage gated chloride channel AACI_RS05495 PF00989 PAS fold AACI_RS05495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS05495 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS05495 PF16736 Single Cache-like AACI_RS05500 PF00486 Transcriptional regulatory protein, C terminal AACI_RS05500 PF00072 Response regulator receiver domain AACI_RS05505 PF07732 Multicopper oxidase AACI_RS05505 PF07731 Multicopper oxidase AACI_RS05505 PF00394 Multicopper oxidase AACI_RS05520 PF00578 AhpC/TSA family AACI_RS05525 PF02683 Cytochrome C biogenesis protein transmembrane region AACI_RS05535 PF07732 Multicopper oxidase AACI_RS05535 PF07731 Multicopper oxidase AACI_RS05535 PF00394 Multicopper oxidase AACI_RS05540 PF02583 Metal-sensitive transcriptional repressor AACI_RS05545 PF00403 Heavy-metal-associated domain AACI_RS05550 PF00403 Heavy-metal-associated domain AACI_RS05565 PF00460 Flagella basal body rod protein AACI_RS05565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AACI_RS05570 PF00460 Flagella basal body rod protein AACI_RS05590 PF01545 Cation efflux family AACI_RS05590 PF16916 Dimerisation domain of Zinc Transporter AACI_RS05595 PF01022 Bacterial regulatory protein, arsR family AACI_RS05600 PF03050 Transposase IS66 family AACI_RS05600 PF13817 IS66 C-terminal element AACI_RS05600 PF13007 Transposase C of IS166 homeodomain AACI_RS05600 PF13005 zinc-finger binding domain of transposase IS66 AACI_RS05635 PF13411 MerR HTH family regulatory protein AACI_RS05635 PF00145 C-5 cytosine-specific DNA methylase AACI_RS05645 PF03852 DNA mismatch endonuclease Vsr AACI_RS05655 PF02086 D12 class N6 adenine-specific DNA methyltransferase AACI_RS05665 PF04041 beta-1,4-mannooligosaccharide phosphorylase AACI_RS05670 PF08281 Sigma-70, region 4 AACI_RS05670 PF04542 Sigma-70 region 2 AACI_RS05760 PF00145 C-5 cytosine-specific DNA methylase AACI_RS05825 PF00563 EAL domain AACI_RS05825 PF00990 Diguanylate cyclase, GGDEF domain AACI_RS05825 PF03707 Bacterial signalling protein N terminal repeat AACI_RS05860 PF07298 NnrU protein AACI_RS05885 PF00216 Bacterial DNA-binding protein AACI_RS05895 PF13614 AAA domain AACI_RS05915 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AACI_RS05925 PF00437 Type II/IV secretion system protein AACI_RS05960 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AACI_RS05960 PF18277 AbrB C-terminal domain AACI_RS05980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AACI_RS05980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACI_RS05980 PF02770 Acyl-CoA dehydrogenase, middle domain AACI_RS05985 PF00378 Enoyl-CoA hydratase/isomerase AACI_RS06000 PF00356 Bacterial regulatory proteins, lacI family AACI_RS06005 PF13416 Bacterial extracellular solute-binding protein AACI_RS06010 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS06015 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS06020 PF02837 Glycosyl hydrolases family 2, sugar binding domain AACI_RS06020 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AACI_RS06020 PF00703 Glycosyl hydrolases family 2 AACI_RS06020 PF02929 Beta galactosidase small chain AACI_RS06020 PF16353 Domain of unknown function(DUF4981) AACI_RS06025 PF00117 Glutamine amidotransferase class-I AACI_RS06030 PF00425 chorismate binding enzyme AACI_RS06030 PF04715 Anthranilate synthase component I, N terminal region AACI_RS06045 PF02774 Semialdehyde dehydrogenase, dimerisation domain AACI_RS06045 PF01118 Semialdehyde dehydrogenase, NAD binding domain AACI_RS06050 PF00696 Amino acid kinase family AACI_RS06055 PF00202 Aminotransferase class-III AACI_RS06060 PF00206 Lyase AACI_RS06060 PF14698 Argininosuccinate lyase C-terminal AACI_RS06060 PF00583 Acetyltransferase (GNAT) family AACI_RS06065 PF00310 Glutamine amidotransferases class-II AACI_RS06065 PF04898 Glutamate synthase central domain AACI_RS06065 PF01493 GXGXG motif AACI_RS06065 PF01645 Conserved region in glutamate synthase AACI_RS06070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AACI_RS06070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AACI_RS06075 PF00764 Arginosuccinate synthase AACI_RS06080 PF14698 Argininosuccinate lyase C-terminal AACI_RS06080 PF00206 Lyase AACI_RS06085 PF01842 ACT domain AACI_RS06085 PF13840 ACT domain AACI_RS06085 PF00696 Amino acid kinase family AACI_RS06090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AACI_RS06090 PF01842 ACT domain AACI_RS06090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AACI_RS06095 PF00266 Aminotransferase class-V AACI_RS06120 PF00176 SNF2 family N-terminal domain AACI_RS06120 PF00271 Helicase conserved C-terminal domain AACI_RS06160 PF00392 Bacterial regulatory proteins, gntR family AACI_RS06165 PF00005 ABC transporter AACI_RS06175 PF00581 Rhodanese-like domain AACI_RS06180 PF00085 Thioredoxin AACI_RS06195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AACI_RS06195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AACI_RS06195 PF00378 Enoyl-CoA hydratase/isomerase AACI_RS06200 PF03358 NADPH-dependent FMN reductase AACI_RS06205 PF07729 FCD domain AACI_RS06205 PF00392 Bacterial regulatory proteins, gntR family AACI_RS06210 PF01184 GPR1/FUN34/yaaH family AACI_RS06215 PF13193 AMP-binding enzyme C-terminal domain AACI_RS06215 PF16177 Acetyl-coenzyme A synthetase N-terminus AACI_RS06215 PF00501 AMP-binding enzyme AACI_RS06220 PF06949 Protein of unknown function (DUF1292) AACI_RS06245 PF00574 Clp protease AACI_RS06250 PF00266 Aminotransferase class-V AACI_RS06255 PF02926 THUMP domain AACI_RS06255 PF02568 Thiamine biosynthesis protein (ThiI) AACI_RS06270 PF05504 Spore germination B3/ GerAC like, C-terminal AACI_RS06280 PF10079 Bacillithiol biosynthesis BshC AACI_RS06285 PF02381 MraZ protein, putative antitoxin-like AACI_RS06290 PF01795 MraW methylase family AACI_RS06300 PF03793 PASTA domain AACI_RS06300 PF03717 Penicillin-binding Protein dimerisation domain AACI_RS06300 PF00905 Penicillin binding protein transpeptidase domain AACI_RS06305 PF00905 Penicillin binding protein transpeptidase domain AACI_RS06305 PF03793 PASTA domain AACI_RS06305 PF03717 Penicillin-binding Protein dimerisation domain AACI_RS06310 PF01225 Mur ligase family, catalytic domain AACI_RS06310 PF02875 Mur ligase family, glutamate ligase domain AACI_RS06310 PF08245 Mur ligase middle domain AACI_RS06315 PF00953 Glycosyl transferase family 4 AACI_RS06320 PF08245 Mur ligase middle domain AACI_RS06320 PF02875 Mur ligase family, glutamate ligase domain AACI_RS06325 PF01098 Cell cycle protein AACI_RS06330 PF04101 Glycosyltransferase family 28 C-terminal domain AACI_RS06330 PF03033 Glycosyltransferase family 28 N-terminal domain AACI_RS06335 PF01565 FAD binding domain AACI_RS06335 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AACI_RS06340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AACI_RS06350 PF13408 Recombinase zinc beta ribbon domain AACI_RS06350 PF07508 Recombinase AACI_RS06350 PF00239 Resolvase, N terminal domain AACI_RS06355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AACI_RS06375 PF06947 Protein of unknown function (DUF1290) AACI_RS06380 PF02491 SHS2 domain inserted in FTSA AACI_RS06385 PF00091 Tubulin/FtsZ family, GTPase domain AACI_RS06385 PF12327 FtsZ family, C-terminal domain AACI_RS06390 PF03419 Sporulation factor SpoIIGA AACI_RS06395 PF04542 Sigma-70 region 2 AACI_RS06395 PF04545 Sigma-70, region 4 AACI_RS06400 PF04545 Sigma-70, region 4 AACI_RS06400 PF04542 Sigma-70 region 2 AACI_RS06400 PF04539 Sigma-70 region 3 AACI_RS06405 PF05239 PRC-barrel domain AACI_RS06410 PF02578 Multi-copper polyphenol oxidoreductase laccase AACI_RS06415 PF01168 Alanine racemase, N-terminal domain AACI_RS06430 PF05103 DivIVA protein AACI_RS06445 PF01258 Prokaryotic dksA/traR C4-type zinc finger AACI_RS06450 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) AACI_RS06455 PF01252 Signal peptidase (SPase) II AACI_RS06460 PF01479 S4 domain AACI_RS06460 PF00849 RNA pseudouridylate synthase AACI_RS06465 PF00156 Phosphoribosyl transferase domain AACI_RS06470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AACI_RS06470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AACI_RS06475 PF01979 Amidohydrolase family AACI_RS06480 PF00117 Glutamine amidotransferase class-I AACI_RS06480 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AACI_RS06485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AACI_RS06485 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AACI_RS06485 PF02142 MGS-like domain AACI_RS06490 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AACI_RS06495 PF00156 Phosphoribosyl transferase domain AACI_RS06500 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AACI_RS06500 PF01266 FAD dependent oxidoreductase AACI_RS06510 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AACI_RS06510 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AACI_RS06515 PF05670 NFACT protein RNA binding domain AACI_RS06520 PF00689 Cation transporting ATPase, C-terminus AACI_RS06520 PF00690 Cation transporter/ATPase, N-terminus AACI_RS06525 PF08340 Domain of unknown function (DUF1732) AACI_RS06525 PF03755 YicC-like family, N-terminal region AACI_RS06530 PF01192 RNA polymerase Rpb6 AACI_RS06535 PF04127 DNA / pantothenate metabolism flavoprotein AACI_RS06535 PF02441 Flavoprotein AACI_RS06540 PF17764 3′ DNA-binding domain (3′BD) AACI_RS06540 PF04851 Type III restriction enzyme, res subunit AACI_RS06540 PF00271 Helicase conserved C-terminal domain AACI_RS06540 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AACI_RS06540 PF18074 Primosomal protein N C-terminal domain AACI_RS06545 PF01327 Polypeptide deformylase AACI_RS06550 PF02911 Formyl transferase, C-terminal domain AACI_RS06550 PF00551 Formyl transferase AACI_RS06555 PF01189 16S rRNA methyltransferase RsmB/F AACI_RS06555 PF01029 NusB family AACI_RS06560 PF04055 Radical SAM superfamily AACI_RS06570 PF03793 PASTA domain AACI_RS06570 PF00069 Protein kinase domain AACI_RS06575 PF03193 RsgA GTPase AACI_RS06575 PF16745 RsgA N-terminal domain AACI_RS06580 PF00834 Ribulose-phosphate 3 epimerase family AACI_RS06585 PF08183 Stage V sporulation protein family AACI_RS06590 PF00830 Ribosomal L28 family AACI_RS06595 PF17191 RecG wedge domain AACI_RS06595 PF00271 Helicase conserved C-terminal domain AACI_RS06595 PF00270 DEAD/DEAH box helicase AACI_RS06600 PF00269 Small, acid-soluble spore proteins, alpha/beta type AACI_RS06605 PF02666 Phosphatidylserine decarboxylase AACI_RS06615 PF13439 Glycosyltransferase Family 4 AACI_RS06615 PF00534 Glycosyl transferases group 1 AACI_RS06620 PF01425 Amidase AACI_RS06630 PF01467 Cytidylyltransferase-like AACI_RS06635 PF01734 Patatin-like phospholipase AACI_RS06645 PF03061 Thioesterase superfamily AACI_RS06650 PF02504 Fatty acid synthesis protein AACI_RS06655 PF00698 Acyl transferase domain AACI_RS06665 PF00550 Phosphopantetheine attachment site AACI_RS06670 PF02801 Beta-ketoacyl synthase, C-terminal domain AACI_RS06670 PF00109 Beta-ketoacyl synthase, N-terminal domain AACI_RS06675 PF00035 Double-stranded RNA binding motif AACI_RS06675 PF14622 Ribonuclease-III-like AACI_RS06680 PF02463 RecF/RecN/SMC N terminal domain AACI_RS06680 PF06470 SMC proteins Flexible Hinge Domain AACI_RS06685 PF02881 SRP54-type protein, helical bundle domain AACI_RS06685 PF00448 SRP54-type protein, GTPase domain AACI_RS06690 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AACI_RS06695 PF02978 Signal peptide binding domain AACI_RS06695 PF02881 SRP54-type protein, helical bundle domain AACI_RS06695 PF00448 SRP54-type protein, GTPase domain AACI_RS06700 PF00886 Ribosomal protein S16 AACI_RS06715 PF01782 RimM N-terminal domain AACI_RS06715 PF05239 PRC-barrel domain AACI_RS06720 PF01746 tRNA (Guanine-1)-methyltransferase AACI_RS06740 PF00425 chorismate binding enzyme AACI_RS06740 PF00117 Glutamine amidotransferase class-I AACI_RS06740 PF04715 Anthranilate synthase component I, N terminal region AACI_RS06745 PF01479 S4 domain AACI_RS06745 PF00849 RNA pseudouridylate synthase AACI_RS06755 PF01551 Peptidase family M23 AACI_RS06760 PF03061 Thioesterase superfamily AACI_RS06780 PF01245 Ribosomal protein L19 AACI_RS06785 PF01926 50S ribosome-binding GTPase AACI_RS06790 PF01351 Ribonuclease HII AACI_RS06800 PF01312 FlhB HrpN YscU SpaS Family AACI_RS06805 PF01522 Polysaccharide deacetylase AACI_RS06810 PF13335 Magnesium chelatase, subunit ChlI C-terminal AACI_RS06810 PF01078 Magnesium chelatase, subunit ChlI AACI_RS06820 PF00549 CoA-ligase AACI_RS06820 PF08442 ATP-grasp domain AACI_RS06825 PF02629 CoA binding domain AACI_RS06825 PF00549 CoA-ligase AACI_RS06830 PF17782 DprA winged helix domain AACI_RS06830 PF02481 DNA recombination-mediator protein A AACI_RS06850 PF01751 Toprim domain AACI_RS06850 PF01396 Topoisomerase DNA binding C4 zinc finger AACI_RS06850 PF01131 DNA topoisomerase AACI_RS06855 PF01134 Glucose inhibited division protein A AACI_RS06860 PF02899 Phage integrase, N-terminal SAM-like domain AACI_RS06860 PF00589 Phage integrase family AACI_RS06865 PF00227 Proteasome subunit AACI_RS06870 PF00004 ATPase family associated with various cellular activities (AAA) AACI_RS06870 PF10431 C-terminal, D2-small domain, of ClpB protein AACI_RS06870 PF07724 AAA domain (Cdc48 subfamily) AACI_RS06875 PF00460 Flagella basal body rod protein AACI_RS06880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AACI_RS06880 PF00460 Flagella basal body rod protein AACI_RS06885 PF02049 Flagellar hook-basal body complex protein FliE AACI_RS06890 PF01514 Secretory protein of YscJ/FliF family AACI_RS06890 PF08345 Flagellar M-ring protein C-terminal AACI_RS06895 PF01706 FliG C-terminal domain AACI_RS06895 PF14841 FliG middle domain AACI_RS06895 PF14842 FliG N-terminal domain AACI_RS06905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AACI_RS06905 PF18269 T3SS EscN ATPase C-terminal domain AACI_RS06905 PF02874 ATP synthase alpha/beta family, beta-barrel domain AACI_RS06925 PF03963 Flagellar hook capping protein - N-terminal region AACI_RS06935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AACI_RS06935 PF07559 Flagellar basal body protein FlaE AACI_RS06935 PF00460 Flagella basal body rod protein AACI_RS06935 PF07559 Flagellar basal body protein FlaE AACI_RS06935 PF00460 Flagella basal body rod protein AACI_RS06935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AACI_RS06950 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AACI_RS06950 PF02154 Flagellar motor switch protein FliM AACI_RS06955 PF04509 CheC-like family AACI_RS06955 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AACI_RS06960 PF00072 Response regulator receiver domain AACI_RS06965 PF04347 Flagellar biosynthesis protein, FliO AACI_RS06970 PF00813 FliP family AACI_RS06975 PF01313 Bacterial export proteins, family 3 AACI_RS06985 PF01312 FlhB HrpN YscU SpaS Family AACI_RS06990 PF00771 FHIPEP family AACI_RS06995 PF00448 SRP54-type protein, GTPase domain AACI_RS07000 PF10609 NUBPL iron-transfer P-loop NTPase AACI_RS07005 PF00072 Response regulator receiver domain AACI_RS07005 PF01339 CheB methylesterase AACI_RS07010 PF01584 CheW-like domain AACI_RS07010 PF07194 P2 response regulator binding domain AACI_RS07010 PF01627 Hpt domain AACI_RS07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS07010 PF02895 Signal transducing histidine kinase, homodimeric domain AACI_RS07015 PF01584 CheW-like domain AACI_RS07020 PF04509 CheC-like family AACI_RS07025 PF03975 CheD chemotactic sensory transduction AACI_RS07035 PF00318 Ribosomal protein S2 AACI_RS07040 PF00889 Elongation factor TS AACI_RS07045 PF00696 Amino acid kinase family AACI_RS07050 PF01765 Ribosome recycling factor AACI_RS07055 PF01255 Putative undecaprenyl diphosphate synthase AACI_RS07065 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AACI_RS07065 PF13288 DXP reductoisomerase C-terminal domain AACI_RS07065 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AACI_RS07070 PF13180 PDZ domain AACI_RS07070 PF02163 Peptidase family M50 AACI_RS07075 PF14480 DNA polymerase III polC-type N-terminus I AACI_RS07075 PF11490 DNA polymerase III polC-type N-terminus II AACI_RS07075 PF07733 Bacterial DNA polymerase III alpha NTPase domain AACI_RS07075 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AACI_RS07075 PF14579 Helix-hairpin-helix motif AACI_RS07075 PF00929 Exonuclease AACI_RS07075 PF02811 PHP domain AACI_RS07080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AACI_RS07085 PF01842 ACT domain AACI_RS07085 PF00800 Prephenate dehydratase AACI_RS07090 PF14492 Elongation Factor G, domain II AACI_RS07090 PF00009 Elongation factor Tu GTP binding domain AACI_RS07090 PF00679 Elongation factor G C-terminus AACI_RS07090 PF03144 Elongation factor Tu domain 2 AACI_RS07095 PF02576 RimP N-terminal domain AACI_RS07095 PF17384 RimP C-terminal SH3 domain AACI_RS07100 PF08529 NusA N-terminal domain AACI_RS07100 PF00575 S1 RNA binding domain AACI_RS07100 PF13184 NusA-like KH domain AACI_RS07105 PF04296 Protein of unknown function (DUF448) AACI_RS07110 PF00009 Elongation factor Tu GTP binding domain AACI_RS07110 PF11987 Translation-initiation factor 2 AACI_RS07110 PF04760 Translation initiation factor IF-2, N-terminal region AACI_RS07115 PF02033 Ribosome-binding factor A AACI_RS07120 PF02272 DHHA1 domain AACI_RS07120 PF01368 DHH family AACI_RS07125 PF01509 TruB family pseudouridylate synthase (N terminal domain) AACI_RS07125 PF16198 tRNA pseudouridylate synthase B C-terminal domain AACI_RS07125 PF09142 tRNA Pseudouridine synthase II, C terminal AACI_RS07130 PF01687 Riboflavin kinase AACI_RS07130 PF06574 FAD synthetase AACI_RS07140 PF00312 Ribosomal protein S15 AACI_RS07145 PF01138 3' exoribonuclease family, domain 1 AACI_RS07145 PF00013 KH domain AACI_RS07145 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AACI_RS07145 PF00575 S1 RNA binding domain AACI_RS07145 PF03725 3' exoribonuclease family, domain 2 AACI_RS07150 PF01522 Polysaccharide deacetylase AACI_RS07155 PF00675 Insulinase (Peptidase family M16) AACI_RS07155 PF05193 Peptidase M16 inactive domain AACI_RS07160 PF00692 dUTPase AACI_RS07165 PF16924 Dipicolinate synthase subunit A N-terminal domain AACI_RS07165 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AACI_RS07170 PF02441 Flavoprotein AACI_RS07175 PF01118 Semialdehyde dehydrogenase, NAD binding domain AACI_RS07175 PF02774 Semialdehyde dehydrogenase, dimerisation domain AACI_RS07180 PF13840 ACT domain AACI_RS07180 PF00696 Amino acid kinase family AACI_RS07185 PF00701 Dihydrodipicolinate synthetase family AACI_RS07190 PF17785 PUA-like domain AACI_RS07190 PF10672 S-adenosylmethionine-dependent methyltransferase AACI_RS07195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AACI_RS07195 PF02770 Acyl-CoA dehydrogenase, middle domain AACI_RS07195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACI_RS07200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AACI_RS07200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AACI_RS07205 PF00171 Aldehyde dehydrogenase family AACI_RS07210 PF00378 Enoyl-CoA hydratase/isomerase AACI_RS07215 PF13193 AMP-binding enzyme C-terminal domain AACI_RS07215 PF00501 AMP-binding enzyme AACI_RS07220 PF00108 Thiolase, N-terminal domain AACI_RS07220 PF02803 Thiolase, C-terminal domain AACI_RS07225 PF00106 short chain dehydrogenase AACI_RS07230 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AACI_RS07230 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AACI_RS07235 PF00753 Metallo-beta-lactamase superfamily AACI_RS07235 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AACI_RS07235 PF17770 Ribonuclease J C-terminal domain AACI_RS07240 PF00574 Clp protease AACI_RS07250 PF17854 FtsK alpha domain AACI_RS07250 PF01580 FtsK/SpoIIIE family AACI_RS07250 PF09397 Ftsk gamma domain AACI_RS07270 PF11868 Protein of unknown function (DUF3388) AACI_RS07275 PF13464 Domain of unknown function (DUF4115) AACI_RS07280 PF04461 Protein of unknown function (DUF520) AACI_RS07285 PF01066 CDP-alcohol phosphatidyltransferase AACI_RS07290 PF02464 Competence-damaged protein AACI_RS07290 PF18146 Damage-inducible protein CinA KH domain AACI_RS07290 PF00994 Probable molybdopterin binding domain AACI_RS07295 PF00270 DEAD/DEAH box helicase AACI_RS07295 PF00271 Helicase conserved C-terminal domain AACI_RS07300 PF00154 recA bacterial DNA recombination protein AACI_RS07305 PF02631 RecX family AACI_RS07310 PF00013 KH domain AACI_RS07310 PF01966 HD domain AACI_RS07310 PF12072 Domain of unknown function (DUF3552) AACI_RS07315 PF04232 Stage V sporulation protein S (SpoVS) AACI_RS07345 PF14398 YheC/D like ATP-grasp AACI_RS07355 PF04055 Radical SAM superfamily AACI_RS07355 PF01938 TRAM domain AACI_RS07355 PF00919 Uncharacterized protein family UPF0004 AACI_RS07365 PF00488 MutS domain V AACI_RS07365 PF05188 MutS domain II AACI_RS07365 PF05190 MutS family domain IV AACI_RS07365 PF01624 MutS domain I AACI_RS07365 PF05192 MutS domain III AACI_RS07370 PF01119 DNA mismatch repair protein, C-terminal domain AACI_RS07370 PF08676 MutL C terminal dimerisation domain AACI_RS07375 PF04445 Putative SAM-dependent methyltransferase AACI_RS07385 PF17209 Hfq protein AACI_RS07450 PF00929 Exonuclease AACI_RS07475 PF01695 IstB-like ATP binding protein AACI_RS07490 PF00872 Transposase, Mutator family AACI_RS07500 PF00872 Transposase, Mutator family AACI_RS07505 PF00872 Transposase, Mutator family AACI_RS07525 PF00872 Transposase, Mutator family AACI_RS07555 PF00872 Transposase, Mutator family AACI_RS07580 PF00872 Transposase, Mutator family AACI_RS07625 PF00872 Transposase, Mutator family AACI_RS07630 PF13087 AAA domain AACI_RS07630 PF13086 AAA domain AACI_RS07630 PF13195 Protein of unknown function (DUF4011) AACI_RS07630 PF13086 AAA domain AACI_RS07630 PF13087 AAA domain AACI_RS07630 PF13195 Protein of unknown function (DUF4011) AACI_RS07640 PF00872 Transposase, Mutator family AACI_RS07645 PF02796 Helix-turn-helix domain of resolvase AACI_RS07645 PF00665 Integrase core domain AACI_RS07650 PF01695 IstB-like ATP binding protein AACI_RS07660 PF00180 Isocitrate/isopropylmalate dehydrogenase AACI_RS07660 PF18324 Hypothetical protein TT1725 AACI_RS07665 PF03323 Bacillus/Clostridium GerA spore germination protein AACI_RS07685 PF03323 Bacillus/Clostridium GerA spore germination protein AACI_RS07690 PF16363 GDP-mannose 4,6 dehydratase AACI_RS07695 PF14667 Polysaccharide biosynthesis C-terminal domain AACI_RS07695 PF01943 Polysaccharide biosynthesis protein AACI_RS07705 PF17866 AAA lid domain AACI_RS07705 PF00004 ATPase family associated with various cellular activities (AAA) AACI_RS07725 PF16360 GTP-binding GTPase Middle Region AACI_RS07725 PF01926 50S ribosome-binding GTPase AACI_RS07725 PF13167 GTP-binding GTPase N-terminal AACI_RS07730 PF06838 Methionine gamma-lyase AACI_RS07735 PF13411 MerR HTH family regulatory protein AACI_RS07740 PF03951 Glutamine synthetase, beta-Grasp domain AACI_RS07740 PF00120 Glutamine synthetase, catalytic domain AACI_RS07745 PF00356 Bacterial regulatory proteins, lacI family AACI_RS07750 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AACI_RS07750 PF08666 SAF domain AACI_RS07755 PF04962 KduI/IolB family AACI_RS07760 PF01232 Mannitol dehydrogenase Rossmann domain AACI_RS07760 PF08125 Mannitol dehydrogenase C-terminal domain AACI_RS07765 PF00083 Sugar (and other) transporter AACI_RS07770 PF01726 LexA DNA binding domain AACI_RS07770 PF00717 Peptidase S24-like AACI_RS07780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AACI_RS07780 PF03129 Anticodon binding domain AACI_RS07790 PF02574 Homocysteine S-methyltransferase AACI_RS07790 PF02219 Methylenetetrahydrofolate reductase AACI_RS07800 PF00990 Diguanylate cyclase, GGDEF domain AACI_RS07800 PF17158 Membrane-associated sensor, integral membrane domain AACI_RS07825 PF01012 Electron transfer flavoprotein domain AACI_RS07825 PF00766 Electron transfer flavoprotein FAD-binding domain AACI_RS07830 PF01012 Electron transfer flavoprotein domain AACI_RS07835 PF08359 YsiA-like protein, C-terminal region AACI_RS07835 PF00440 Bacterial regulatory proteins, tetR family AACI_RS07840 PF13183 4Fe-4S dicluster domain AACI_RS07840 PF02754 Cysteine-rich domain AACI_RS07845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AACI_RS07845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AACI_RS07845 PF00378 Enoyl-CoA hydratase/isomerase AACI_RS07850 PF02803 Thiolase, C-terminal domain AACI_RS07850 PF00108 Thiolase, N-terminal domain AACI_RS07855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACI_RS07855 PF02770 Acyl-CoA dehydrogenase, middle domain AACI_RS07855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AACI_RS07860 PF13193 AMP-binding enzyme C-terminal domain AACI_RS07860 PF00501 AMP-binding enzyme AACI_RS07870 PF00317 Ribonucleotide reductase, all-alpha domain AACI_RS07870 PF02867 Ribonucleotide reductase, barrel domain AACI_RS07870 PF03477 ATP cone domain AACI_RS07875 PF00268 Ribonucleotide reductase, small chain AACI_RS07880 PF13520 Amino acid permease AACI_RS07885 PF12805 FUSC-like inner membrane protein yccS AACI_RS07905 PF03618 Kinase/pyrophosphorylase AACI_RS07910 PF01380 SIS domain AACI_RS07910 PF00571 CBS domain AACI_RS07915 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AACI_RS07915 PF02896 PEP-utilising enzyme, TIM barrel domain AACI_RS07915 PF00391 PEP-utilising enzyme, mobile domain AACI_RS07920 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AACI_RS07930 PF03737 Aldolase/RraA AACI_RS07935 PF02585 GlcNAc-PI de-N-acetylase AACI_RS07945 PF07729 FCD domain AACI_RS07945 PF00392 Bacterial regulatory proteins, gntR family AACI_RS07950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AACI_RS07960 PF01361 Tautomerase enzyme AACI_RS07970 PF07836 DmpG-like communication domain AACI_RS07970 PF00682 HMGL-like AACI_RS07975 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AACI_RS07975 PF01118 Semialdehyde dehydrogenase, NAD binding domain AACI_RS07980 PF01557 Fumarylacetoacetate (FAA) hydrolase family AACI_RS07985 PF00171 Aldehyde dehydrogenase family AACI_RS07995 PF09339 IclR helix-turn-helix domain AACI_RS07995 PF01614 Bacterial transcriptional regulator AACI_RS08000 PF01494 FAD binding domain AACI_RS08010 PF12804 MobA-like NTP transferase domain AACI_RS08015 PF03951 Glutamine synthetase, beta-Grasp domain AACI_RS08015 PF00120 Glutamine synthetase, catalytic domain AACI_RS08020 PF01931 Protein of unknown function DUF84 AACI_RS08025 PF01134 Glucose inhibited division protein A AACI_RS08025 PF13932 GidA associated domain AACI_RS08030 PF01566 Natural resistance-associated macrophage protein AACI_RS08035 PF01588 Putative tRNA binding domain AACI_RS08050 PF01225 Mur ligase family, catalytic domain AACI_RS08050 PF02875 Mur ligase family, glutamate ligase domain AACI_RS08050 PF08245 Mur ligase middle domain AACI_RS08055 PF01820 D-ala D-ala ligase N-terminus AACI_RS08055 PF07478 D-ala D-ala ligase C-terminus AACI_RS08060 PF07261 Replication initiation and membrane attachment AACI_RS08065 PF01336 OB-fold nucleic acid binding domain AACI_RS08065 PF00152 tRNA synthetases class II (D, K and N) AACI_RS08070 PF01434 Peptidase family M41 AACI_RS08070 PF17862 AAA+ lid domain AACI_RS08070 PF00004 ATPase family associated with various cellular activities (AAA) AACI_RS08085 PF14084 Protein of unknown function (DUF4264) AACI_RS08090 PF01975 Survival protein SurE AACI_RS08095 PF01979 Amidohydrolase family AACI_RS08100 PF01008 Initiation factor 2 subunit family AACI_RS08105 PF01048 Phosphorylase superfamily AACI_RS08110 PF01068 ATP dependent DNA ligase domain AACI_RS08120 PF02735 Ku70/Ku80 beta-barrel domain AACI_RS08125 PF04851 Type III restriction enzyme, res subunit AACI_RS08125 PF00929 Exonuclease AACI_RS08125 PF13307 Helicase C-terminal domain AACI_RS08135 PF08279 HTH domain AACI_RS08135 PF03099 Biotin/lipoate A/B protein ligase family AACI_RS08135 PF02237 Biotin protein ligase C terminal domain AACI_RS08140 PF12627 Probable RNA and SrmB- binding site of polymerase A AACI_RS08140 PF01743 Poly A polymerase head domain AACI_RS08140 PF13735 tRNA nucleotidyltransferase domain 2 putative AACI_RS08145 PF13439 Glycosyltransferase Family 4 AACI_RS08145 PF00534 Glycosyl transferases group 1 AACI_RS08150 PF05173 Dihydrodipicolinate reductase, C-terminus AACI_RS08150 PF01113 Dihydrodipicolinate reductase, N-terminus AACI_RS08155 PF03819 MazG nucleotide pyrophosphohydrolase domain AACI_RS08165 PF07670 Nucleoside recognition AACI_RS08170 PF02673 Bacitracin resistance protein BacA AACI_RS08180 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AACI_RS08180 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AACI_RS08185 PF08864 UPF0302 domain AACI_RS08185 PF08858 IDEAL domain AACI_RS08195 PF02153 Prephenate dehydrogenase AACI_RS08200 PF00793 DAHP synthetase I family AACI_RS08200 PF18152 DAHP synthase ferredoxin-like domain AACI_RS08205 PF00290 Tryptophan synthase alpha chain AACI_RS08210 PF00291 Pyridoxal-phosphate dependent enzyme AACI_RS08215 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AACI_RS08220 PF00218 Indole-3-glycerol phosphate synthase AACI_RS08225 PF00591 Glycosyl transferase family, a/b domain AACI_RS08225 PF02885 Glycosyl transferase family, helical bundle domain AACI_RS08230 PF07736 Chorismate mutase type I AACI_RS08235 PF01761 3-dehydroquinate synthase AACI_RS08240 PF01264 Chorismate synthase AACI_RS08245 PF05343 M42 glutamyl aminopeptidase AACI_RS08250 PF05343 M42 glutamyl aminopeptidase AACI_RS08255 PF05343 M42 glutamyl aminopeptidase AACI_RS08260 PF01479 S4 domain AACI_RS08260 PF00849 RNA pseudouridylate synthase AACI_RS08270 PF00877 NlpC/P60 family AACI_RS08270 PF01476 LysM domain AACI_RS08280 PF07728 AAA domain (dynein-related subfamily) AACI_RS08285 PF02817 e3 binding domain AACI_RS08285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AACI_RS08285 PF00364 Biotin-requiring enzyme AACI_RS08290 PF17092 Penicillin-binding protein OB-like domain AACI_RS08290 PF00912 Transglycosylase AACI_RS08290 PF00905 Penicillin binding protein transpeptidase domain AACI_RS08305 PF01739 CheR methyltransferase, SAM binding domain AACI_RS08305 PF03705 CheR methyltransferase, all-alpha domain AACI_RS08315 PF00334 Nucleoside diphosphate kinase AACI_RS08320 PF00348 Polyprenyl synthetase AACI_RS08325 PF01209 ubiE/COQ5 methyltransferase family AACI_RS08335 PF02081 Tryptophan RNA-binding attenuator protein AACI_RS08345 PF00107 Zinc-binding dehydrogenase AACI_RS08345 PF08240 Alcohol dehydrogenase GroES-like domain AACI_RS08350 PF09547 Stage IV sporulation protein A (spore_IV_A) AACI_RS08355 PF01597 Glycine cleavage H-protein AACI_RS08360 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AACI_RS08360 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AACI_RS08365 PF02660 Glycerol-3-phosphate acyltransferase AACI_RS08370 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AACI_RS08370 PF01926 50S ribosome-binding GTPase AACI_RS08380 PF00575 S1 RNA binding domain AACI_RS08390 PF02224 Cytidylate kinase AACI_RS08400 PF07317 Flagellar regulator YcgR AACI_RS08400 PF07238 PilZ domain AACI_RS08410 PF07486 Cell Wall Hydrolase AACI_RS08410 PF01471 Putative peptidoglycan binding domain AACI_RS08420 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AACI_RS08420 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AACI_RS08425 PF05389 Negative regulator of genetic competence (MecA) AACI_RS08430 PF00356 Bacterial regulatory proteins, lacI family AACI_RS08455 PF13361 UvrD-like helicase C-terminal domain AACI_RS08455 PF13361 UvrD-like helicase C-terminal domain AACI_RS08455 PF00580 UvrD/REP helicase N-terminal domain AACI_RS08455 PF00580 UvrD/REP helicase N-terminal domain AACI_RS08465 PF08241 Methyltransferase domain AACI_RS08475 PF17820 PDZ domain AACI_RS08475 PF13180 PDZ domain AACI_RS08485 PF13367 PrsW family intramembrane metalloprotease AACI_RS08495 PF02146 Sir2 family AACI_RS08500 PF01381 Helix-turn-helix AACI_RS08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS08510 PF18698 Histidine kinase sensor domain AACI_RS08510 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS08510 PF00989 PAS fold AACI_RS08510 PF00672 HAMP domain AACI_RS08515 PF00072 Response regulator receiver domain AACI_RS08515 PF00486 Transcriptional regulatory protein, C terminal AACI_RS08525 PF00849 RNA pseudouridylate synthase AACI_RS08525 PF01479 S4 domain AACI_RS08530 PF07670 Nucleoside recognition AACI_RS08535 PF07670 Nucleoside recognition AACI_RS08540 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AACI_RS08550 PF04079 Segregation and condensation complex subunit ScpB AACI_RS08555 PF02616 Segregation and condensation protein ScpA AACI_RS08560 PF02163 Peptidase family M50 AACI_RS08570 PF14097 Stage V sporulation protein AE1 AACI_RS08575 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AACI_RS08580 PF07451 Stage V sporulation protein AD (SpoVAD) AACI_RS08585 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AACI_RS08590 PF04542 Sigma-70 region 2 AACI_RS08590 PF04539 Sigma-70 region 3 AACI_RS08590 PF04545 Sigma-70, region 4 AACI_RS08595 PF13581 Histidine kinase-like ATPase domain AACI_RS08600 PF01740 STAS domain AACI_RS08610 PF00768 D-alanyl-D-alanine carboxypeptidase AACI_RS08610 PF07943 Penicillin-binding protein 5, C-terminal domain AACI_RS08615 PF01676 Metalloenzyme superfamily AACI_RS08620 PF00589 Phage integrase family AACI_RS08620 PF02899 Phage integrase, N-terminal SAM-like domain AACI_RS08640 PF00293 NUDIX domain AACI_RS08650 PF03099 Biotin/lipoate A/B protein ligase family AACI_RS08655 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AACI_RS08655 PF04055 Radical SAM superfamily AACI_RS08660 PF01967 MoaC family AACI_RS08665 PF02391 MoaE protein AACI_RS08670 PF01476 LysM domain AACI_RS08670 PF00704 Glycosyl hydrolases family 18 AACI_RS08690 PF07687 Peptidase dimerisation domain AACI_RS08690 PF01546 Peptidase family M20/M25/M40 AACI_RS08695 PF06778 Chlorite dismutase AACI_RS08705 PF00072 Response regulator receiver domain AACI_RS08705 PF08769 Sporulation initiation factor Spo0A C terminal AACI_RS08710 PF17820 PDZ domain AACI_RS08710 PF05580 SpoIVB peptidase S55 AACI_RS08715 PF02463 RecF/RecN/SMC N terminal domain AACI_RS08720 PF01513 ATP-NAD kinase AACI_RS08730 PF01728 FtsJ-like methyltransferase AACI_RS08730 PF01479 S4 domain AACI_RS08740 PF00348 Polyprenyl synthetase AACI_RS08745 PF02609 Exonuclease VII small subunit AACI_RS08750 PF02601 Exonuclease VII, large subunit AACI_RS08750 PF13742 OB-fold nucleic acid binding domain AACI_RS08755 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AACI_RS08755 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AACI_RS08760 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACI_RS08765 PF00814 Glycoprotease family AACI_RS08770 PF01029 NusB family AACI_RS08785 PF03780 Asp23 family, cell envelope-related function AACI_RS08790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AACI_RS08790 PF00289 Biotin carboxylase, N-terminal domain AACI_RS08790 PF02785 Biotin carboxylase C-terminal domain AACI_RS08795 PF00364 Biotin-requiring enzyme AACI_RS08815 PF09546 Stage III sporulation protein AE (spore_III_AE) AACI_RS08820 PF06686 Stage III sporulation protein AC/AD protein family AACI_RS08840 PF09285 Elongation factor P, C-terminal AACI_RS08840 PF08207 Elongation factor P (EF-P) KOW-like domain AACI_RS08840 PF01132 Elongation factor P (EF-P) OB domain AACI_RS08845 PF01220 Dehydroquinase class II AACI_RS08850 PF00300 Histidine phosphatase superfamily (branch 1) AACI_RS08855 PF02347 Glycine cleavage system P-protein AACI_RS08860 PF02347 Glycine cleavage system P-protein AACI_RS08865 PF08669 Glycine cleavage T-protein C-terminal barrel domain AACI_RS08865 PF01571 Aminomethyltransferase folate-binding domain AACI_RS08870 PF00176 SNF2 family N-terminal domain AACI_RS08870 PF00271 Helicase conserved C-terminal domain AACI_RS08875 PF11079 Bacterial protein YqhG of unknown function AACI_RS08880 PF00308 Bacterial dnaA protein AACI_RS08880 PF08299 Bacterial dnaA protein helix-turn-helix AACI_RS08885 PF01202 Shikimate kinase AACI_RS08910 PF08334 Type II secretion system (T2SS), protein G AACI_RS08910 PF07963 Prokaryotic N-terminal methylation motif AACI_RS08915 PF00482 Type II secretion system (T2SS), protein F AACI_RS08920 PF00437 Type II/IV secretion system protein AACI_RS08930 PF09269 Domain of unknown function (DUF1967) AACI_RS08930 PF01018 GTP1/OBG AACI_RS08930 PF01926 50S ribosome-binding GTPase AACI_RS08940 PF01016 Ribosomal L27 protein AACI_RS08945 PF04327 Cysteine protease Prp AACI_RS08950 PF00829 Ribosomal prokaryotic L21 protein AACI_RS08955 PF02163 Peptidase family M50 AACI_RS08965 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AACI_RS08970 PF03775 Septum formation inhibitor MinC, C-terminal domain AACI_RS08990 PF04002 RadC-like JAB domain AACI_RS08990 PF12826 Helix-hairpin-helix motif AACI_RS09000 PF04185 Phosphoesterase family AACI_RS09000 PF05506 Domain of unknown function (DUF756) AACI_RS09005 PF03990 G5-linked-Ubiquitin-like domain AACI_RS09005 PF07501 G5 domain AACI_RS09005 PF06725 3D domain AACI_RS09010 PF08245 Mur ligase middle domain AACI_RS09010 PF02875 Mur ligase family, glutamate ligase domain AACI_RS09010 PF01225 Mur ligase family, catalytic domain AACI_RS09015 PF02875 Mur ligase family, glutamate ligase domain AACI_RS09015 PF08245 Mur ligase middle domain AACI_RS09020 PF08264 Anticodon-binding domain of tRNA AACI_RS09020 PF10458 Valyl tRNA synthetase tRNA binding arm AACI_RS09020 PF00133 tRNA synthetases class I (I, L, M and V) AACI_RS09035 PF00202 Aminotransferase class-III AACI_RS09040 PF00490 Delta-aminolevulinic acid dehydratase AACI_RS09050 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AACI_RS09050 PF03900 Porphobilinogen deaminase, C-terminal domain AACI_RS09060 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AACI_RS09060 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AACI_RS09060 PF01488 Shikimate / quinate 5-dehydrogenase AACI_RS09065 PF01926 50S ribosome-binding GTPase AACI_RS09070 PF02190 ATP-dependent protease La (LON) substrate-binding domain AACI_RS09070 PF05362 Lon protease (S16) C-terminal proteolytic domain AACI_RS09070 PF00004 ATPase family associated with various cellular activities (AAA) AACI_RS09075 PF05362 Lon protease (S16) C-terminal proteolytic domain AACI_RS09075 PF00004 ATPase family associated with various cellular activities (AAA) AACI_RS09080 PF06689 ClpX C4-type zinc finger AACI_RS09080 PF10431 C-terminal, D2-small domain, of ClpB protein AACI_RS09080 PF07724 AAA domain (Cdc48 subfamily) AACI_RS09085 PF00574 Clp protease AACI_RS09090 PF05697 Bacterial trigger factor protein (TF) AACI_RS09090 PF05698 Bacterial trigger factor protein (TF) C-terminus AACI_RS09090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AACI_RS09105 PF01725 Ham1 family AACI_RS09110 PF01177 Asp/Glu/Hydantoin racemase AACI_RS09115 PF01047 MarR family AACI_RS09120 PF02770 Acyl-CoA dehydrogenase, middle domain AACI_RS09120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACI_RS09120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AACI_RS09125 PF02515 CoA-transferase family III AACI_RS09140 PF00196 Bacterial regulatory proteins, luxR family AACI_RS09145 PF00155 Aminotransferase class I and II AACI_RS09155 PF00392 Bacterial regulatory proteins, gntR family AACI_RS09155 PF07702 UTRA domain AACI_RS09160 PF07690 Major Facilitator Superfamily AACI_RS09165 PF17773 UPF0176 acylphosphatase like domain AACI_RS09165 PF12368 Rhodanase C-terminal AACI_RS09165 PF00581 Rhodanese-like domain AACI_RS09175 PF13183 4Fe-4S dicluster domain AACI_RS09175 PF13085 2Fe-2S iron-sulfur cluster binding domain AACI_RS09180 PF00890 FAD binding domain AACI_RS09180 PF02910 Fumarate reductase flavoprotein C-term AACI_RS09185 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AACI_RS09190 PF08459 UvrC Helix-hairpin-helix N-terminal AACI_RS09190 PF01541 GIY-YIG catalytic domain AACI_RS09190 PF02151 UvrB/uvrC motif AACI_RS09215 PF00749 tRNA synthetases class I (E and Q), catalytic domain AACI_RS09225 PF00155 Aminotransferase class I and II AACI_RS09235 PF01699 Sodium/calcium exchanger protein AACI_RS09265 PF00535 Glycosyl transferase family 2 AACI_RS09275 PF01047 MarR family AACI_RS09290 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AACI_RS09295 PF13091 PLD-like domain AACI_RS09295 PF13396 Phospholipase_D-nuclease N-terminal AACI_RS09300 PF00893 Small Multidrug Resistance protein AACI_RS09305 PF16916 Dimerisation domain of Zinc Transporter AACI_RS09305 PF01545 Cation efflux family AACI_RS09310 PF00317 Ribonucleotide reductase, all-alpha domain AACI_RS09310 PF02867 Ribonucleotide reductase, barrel domain AACI_RS09310 PF03477 ATP cone domain AACI_RS09315 PF03477 ATP cone domain AACI_RS09320 PF13344 Haloacid dehalogenase-like hydrolase AACI_RS09325 PF00753 Metallo-beta-lactamase superfamily AACI_RS09325 PF16123 Hydroxyacylglutathione hydrolase C-terminus AACI_RS09335 PF00535 Glycosyl transferase family 2 AACI_RS09340 PF00892 EamA-like transporter family AACI_RS09345 PF01678 Diaminopimelate epimerase AACI_RS09360 PF00232 Glycosyl hydrolase family 1 AACI_RS09365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AACI_RS09365 PF00005 ABC transporter AACI_RS09370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AACI_RS09370 PF00005 ABC transporter AACI_RS09375 PF12911 N-terminal TM domain of oligopeptide transport permease C AACI_RS09375 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS09380 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS09385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AACI_RS09395 PF00037 4Fe-4S binding domain AACI_RS09395 PF12800 4Fe-4S binding domain AACI_RS09405 PF00872 Transposase, Mutator family AACI_RS09410 PF00005 ABC transporter AACI_RS09415 PF01895 PhoU domain AACI_RS09420 PF01476 LysM domain AACI_RS09420 PF00877 NlpC/P60 family AACI_RS09425 PF01613 Flavin reductase like domain AACI_RS09430 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase AACI_RS09430 PF04101 Glycosyltransferase family 28 C-terminal domain AACI_RS09440 PF01522 Polysaccharide deacetylase AACI_RS09445 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase AACI_RS09445 PF04101 Glycosyltransferase family 28 C-terminal domain AACI_RS09450 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS09455 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS09460 PF12849 PBP superfamily domain AACI_RS09465 PF00561 alpha/beta hydrolase fold AACI_RS09470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AACI_RS09470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AACI_RS09470 PF16582 Middle domain of thiamine pyrophosphate AACI_RS09475 PF00425 chorismate binding enzyme AACI_RS09480 PF00501 AMP-binding enzyme AACI_RS09480 PF13193 AMP-binding enzyme C-terminal domain AACI_RS09485 PF00378 Enoyl-CoA hydratase/isomerase AACI_RS09490 PF01040 UbiA prenyltransferase family AACI_RS09495 PF02634 FdhD/NarQ family AACI_RS09500 PF07849 Protein of unknown function (DUF1641) AACI_RS09505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AACI_RS09505 PF01568 Molydopterin dinucleotide binding domain AACI_RS09505 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AACI_RS09505 PF12838 4Fe-4S dicluster domain AACI_RS09505 PF00384 Molybdopterin oxidoreductase AACI_RS09510 PF03190 Protein of unknown function, DUF255 AACI_RS09515 PF03190 Protein of unknown function, DUF255 AACI_RS09525 PF00892 EamA-like transporter family AACI_RS09535 PF03070 TENA/THI-4/PQQC family AACI_RS09540 PF08543 Phosphomethylpyrimidine kinase AACI_RS09545 PF02110 Hydroxyethylthiazole kinase family AACI_RS09550 PF02581 Thiamine monophosphate synthase AACI_RS09555 PF00664 ABC transporter transmembrane region AACI_RS09555 PF00005 ABC transporter AACI_RS09560 PF00664 ABC transporter transmembrane region AACI_RS09560 PF00005 ABC transporter AACI_RS09565 PF02322 Cytochrome bd terminal oxidase subunit II AACI_RS09570 PF01654 Cytochrome bd terminal oxidase subunit I AACI_RS09575 PF07690 Major Facilitator Superfamily AACI_RS09580 PF01047 MarR family AACI_RS09590 PF00005 ABC transporter AACI_RS09595 PF01032 FecCD transport family AACI_RS09600 PF01497 Periplasmic binding protein AACI_RS09610 PF01923 Cobalamin adenosyltransferase AACI_RS09615 PF02277 Phosphoribosyltransferase AACI_RS09620 PF01638 HxlR-like helix-turn-helix AACI_RS09625 PF01242 6-pyruvoyl tetrahydropterin synthase AACI_RS09630 PF04055 Radical SAM superfamily AACI_RS09635 PF13419 Haloacid dehalogenase-like hydrolase AACI_RS09640 PF00269 Small, acid-soluble spore proteins, alpha/beta type AACI_RS09645 PF02541 Ppx/GppA phosphatase family AACI_RS09650 PF01790 Prolipoprotein diacylglyceryl transferase AACI_RS09660 PF04204 Homoserine O-succinyltransferase AACI_RS09670 PF01384 Phosphate transporter family AACI_RS09675 PF02261 Aspartate decarboxylase AACI_RS09690 PF03323 Bacillus/Clostridium GerA spore germination protein AACI_RS09710 PF00989 PAS fold AACI_RS09710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS09710 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS09710 PF08447 PAS fold AACI_RS09720 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AACI_RS09725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS09725 PF18698 Histidine kinase sensor domain AACI_RS09725 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS09725 PF00989 PAS fold AACI_RS09725 PF00672 HAMP domain AACI_RS09730 PF00072 Response regulator receiver domain AACI_RS09730 PF00486 Transcriptional regulatory protein, C terminal AACI_RS09755 PF01784 NIF3 (NGG1p interacting factor 3) AACI_RS09760 PF04816 tRNA (adenine(22)-N(1))-methyltransferase AACI_RS09770 PF04545 Sigma-70, region 4 AACI_RS09770 PF04539 Sigma-70 region 3 AACI_RS09770 PF03979 Sigma-70 factor, region 1.1 AACI_RS09770 PF00140 Sigma-70 factor, region 1.2 AACI_RS09770 PF04542 Sigma-70 region 2 AACI_RS09775 PF08275 DNA primase catalytic core, N-terminal domain AACI_RS09775 PF10410 DnaB-helicase binding domain of primase AACI_RS09775 PF01807 CHC2 zinc finger AACI_RS09780 PF02565 Recombination protein O C terminal AACI_RS09780 PF11967 Recombination protein O N terminal AACI_RS09785 PF07650 KH domain AACI_RS09785 PF01926 50S ribosome-binding GTPase AACI_RS09795 PF02130 Uncharacterized protein family UPF0054 AACI_RS09800 PF01966 HD domain AACI_RS09800 PF07697 7TM-HD extracellular AACI_RS09800 PF07698 7TM receptor with intracellular HD hydrolase AACI_RS09805 PF02562 PhoH-like protein AACI_RS09820 PF09424 Yqey-like protein AACI_RS09825 PF01165 Ribosomal protein S21 AACI_RS09835 PF01791 DeoC/LacD family aldolase AACI_RS09840 PF01938 TRAM domain AACI_RS09840 PF00919 Uncharacterized protein family UPF0004 AACI_RS09840 PF04055 Radical SAM superfamily AACI_RS09845 PF04452 RNA methyltransferase AACI_RS09855 PF00684 DnaJ central domain AACI_RS09855 PF01556 DnaJ C terminal domain AACI_RS09855 PF00226 DnaJ domain AACI_RS09860 PF00012 Hsp70 protein AACI_RS09865 PF01025 GrpE AACI_RS09870 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AACI_RS09870 PF01628 HrcA protein C terminal domain AACI_RS09875 PF06969 HemN C-terminal domain AACI_RS09875 PF04055 Radical SAM superfamily AACI_RS09880 PF06421 GTP-binding protein LepA C-terminus AACI_RS09880 PF00009 Elongation factor Tu GTP binding domain AACI_RS09880 PF00679 Elongation factor G C-terminus AACI_RS09880 PF03144 Elongation factor Tu domain 2 AACI_RS09895 PF01464 Transglycosylase SLT domain AACI_RS09900 PF03418 Germination protease AACI_RS09905 PF01649 Ribosomal protein S20 AACI_RS09920 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACI_RS09930 PF10531 SLBB domain AACI_RS09935 PF02742 Iron dependent repressor, metal binding and dimerisation domain AACI_RS09935 PF01325 Iron dependent repressor, N-terminal DNA binding domain AACI_RS09940 PF12697 Alpha/beta hydrolase family AACI_RS09940 PF08241 Methyltransferase domain AACI_RS09950 PF01966 HD domain AACI_RS09955 PF01467 Cytidylyltransferase-like AACI_RS09960 PF08501 Shikimate dehydrogenase substrate binding domain AACI_RS09960 PF01488 Shikimate / quinate 5-dehydrogenase AACI_RS09960 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AACI_RS09965 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AACI_RS09965 PF01926 50S ribosome-binding GTPase AACI_RS09980 PF04545 Sigma-70, region 4 AACI_RS09980 PF04542 Sigma-70 region 2 AACI_RS09985 PF01209 ubiE/COQ5 methyltransferase family AACI_RS10000 PF03652 Holliday junction resolvase AACI_RS10005 PF06135 IreB regulatory phosphoprotein AACI_RS10010 PF01411 tRNA synthetases class II (A) AACI_RS10010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AACI_RS10010 PF02272 DHHA1 domain AACI_RS10015 PF01594 AI-2E family transporter AACI_RS10025 PF00266 Aminotransferase class-V AACI_RS10030 PF02082 Transcriptional regulator AACI_RS10035 PF12002 MgsA AAA+ ATPase C terminal AACI_RS10035 PF16193 AAA C-terminal domain AACI_RS10035 PF00004 ATPase family associated with various cellular activities (AAA) AACI_RS10045 PF01451 Low molecular weight phosphotyrosine protein phosphatase AACI_RS10055 PF13193 AMP-binding enzyme C-terminal domain AACI_RS10055 PF00501 AMP-binding enzyme AACI_RS10065 PF02938 GAD domain AACI_RS10065 PF00152 tRNA synthetases class II (D, K and N) AACI_RS10065 PF01336 OB-fold nucleic acid binding domain AACI_RS10070 PF13393 Histidyl-tRNA synthetase AACI_RS10070 PF03129 Anticodon binding domain AACI_RS10075 PF00202 Aminotransferase class-III AACI_RS10090 PF00005 ABC transporter AACI_RS10100 PF07690 Major Facilitator Superfamily AACI_RS10110 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS10115 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS10125 PF00355 Rieske [2Fe-2S] domain AACI_RS10130 PF00378 Enoyl-CoA hydratase/isomerase AACI_RS10135 PF01039 Carboxyl transferase domain AACI_RS10140 PF00682 HMGL-like AACI_RS10145 PF00364 Biotin-requiring enzyme AACI_RS10150 PF02785 Biotin carboxylase C-terminal domain AACI_RS10150 PF00289 Biotin carboxylase, N-terminal domain AACI_RS10150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AACI_RS10155 PF02785 Biotin carboxylase C-terminal domain AACI_RS10155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AACI_RS10155 PF00289 Biotin carboxylase, N-terminal domain AACI_RS10160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AACI_RS10160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACI_RS10160 PF02770 Acyl-CoA dehydrogenase, middle domain AACI_RS10170 PF02803 Thiolase, C-terminal domain AACI_RS10170 PF00108 Thiolase, N-terminal domain AACI_RS10175 PF01144 Coenzyme A transferase AACI_RS10180 PF01144 Coenzyme A transferase AACI_RS10190 PF14489 QueF-like protein AACI_RS10195 PF01189 16S rRNA methyltransferase RsmB/F AACI_RS10195 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AACI_RS10195 PF17126 RsmF rRNA methyltransferase first C-terminal domain AACI_RS10200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AACI_RS10200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AACI_RS10225 PF00248 Aldo/keto reductase family AACI_RS10230 PF03454 MoeA C-terminal region (domain IV) AACI_RS10230 PF03453 MoeA N-terminal region (domain I and II) AACI_RS10230 PF00994 Probable molybdopterin binding domain AACI_RS10235 PF00483 Nucleotidyl transferase AACI_RS10240 PF08239 Bacterial SH3 domain AACI_RS10240 PF01476 LysM domain AACI_RS10240 PF00877 NlpC/P60 family AACI_RS10250 PF13361 UvrD-like helicase C-terminal domain AACI_RS10250 PF00580 UvrD/REP helicase N-terminal domain AACI_RS10250 PF12705 PD-(D/E)XK nuclease superfamily AACI_RS10255 PF12705 PD-(D/E)XK nuclease superfamily AACI_RS10255 PF13361 UvrD-like helicase C-terminal domain AACI_RS10260 PF07690 Major Facilitator Superfamily AACI_RS10265 PF00795 Carbon-nitrogen hydrolase AACI_RS10270 PF00324 Amino acid permease AACI_RS10275 PF00202 Aminotransferase class-III AACI_RS10280 PF02954 Bacterial regulatory protein, Fis family AACI_RS10280 PF00989 PAS fold AACI_RS10280 PF00158 Sigma-54 interaction domain AACI_RS10285 PF01207 Dihydrouridine synthase (Dus) AACI_RS10295 PF00768 D-alanyl-D-alanine carboxypeptidase AACI_RS10295 PF07943 Penicillin-binding protein 5, C-terminal domain AACI_RS10300 PF18357 Diphteria toxin repressor SH3 domain AACI_RS10300 PF01325 Iron dependent repressor, N-terminal DNA binding domain AACI_RS10300 PF02742 Iron dependent repressor, metal binding and dimerisation domain AACI_RS10305 PF01557 Fumarylacetoacetate (FAA) hydrolase family AACI_RS10310 PF06491 Disulphide isomerase AACI_RS10315 PF01208 Uroporphyrinogen decarboxylase (URO-D) AACI_RS10320 PF00762 Ferrochelatase AACI_RS10325 PF01593 Flavin containing amine oxidoreductase AACI_RS10335 PF01925 Sulfite exporter TauE/SafE AACI_RS10340 PF00563 EAL domain AACI_RS10340 PF00990 Diguanylate cyclase, GGDEF domain AACI_RS10340 PF03707 Bacterial signalling protein N terminal repeat AACI_RS10350 PF02580 D-Tyr-tRNA(Tyr) deacylase AACI_RS10355 PF02824 TGS domain AACI_RS10355 PF13291 ACT domain AACI_RS10355 PF04607 Region found in RelA / SpoT proteins AACI_RS10360 PF00156 Phosphoribosyl transferase domain AACI_RS10365 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AACI_RS10365 PF17768 RecJ OB domain AACI_RS10365 PF02272 DHHA1 domain AACI_RS10365 PF01368 DHH family AACI_RS10370 PF16916 Dimerisation domain of Zinc Transporter AACI_RS10370 PF01545 Cation efflux family AACI_RS10375 PF02355 Protein export membrane protein AACI_RS10380 PF02355 Protein export membrane protein AACI_RS10385 PF13797 Post-transcriptional regulator AACI_RS10390 PF14667 Polysaccharide biosynthesis C-terminal domain AACI_RS10390 PF01943 Polysaccharide biosynthesis protein AACI_RS10400 PF00360 Phytochrome region AACI_RS10400 PF01590 GAF domain AACI_RS10400 PF00563 EAL domain AACI_RS10400 PF00990 Diguanylate cyclase, GGDEF domain AACI_RS10415 PF01702 Queuine tRNA-ribosyltransferase AACI_RS10420 PF02547 Queuosine biosynthesis protein AACI_RS10425 PF00942 Cellulose binding domain AACI_RS10425 PF12791 Anti-sigma factor N-terminus AACI_RS10430 PF04542 Sigma-70 region 2 AACI_RS10435 PF05496 Holliday junction DNA helicase RuvB P-loop domain AACI_RS10435 PF17864 RuvB AAA lid domain AACI_RS10435 PF05491 RuvB C-terminal winged helix domain AACI_RS10440 PF01330 RuvA N terminal domain AACI_RS10440 PF07499 RuvA, C-terminal domain AACI_RS10445 PF02075 Crossover junction endodeoxyribonuclease RuvC AACI_RS10455 PF01709 Transcriptional regulator AACI_RS10460 PF02540 NAD synthase AACI_RS10465 PF02540 NAD synthase AACI_RS10465 PF00795 Carbon-nitrogen hydrolase AACI_RS10485 PF00579 tRNA synthetases class I (W and Y) AACI_RS10485 PF01479 S4 domain AACI_RS10490 PF00905 Penicillin binding protein transpeptidase domain AACI_RS10490 PF00912 Transglycosylase AACI_RS10495 PF00488 MutS domain V AACI_RS10495 PF01713 Smr domain AACI_RS10510 PF05164 Cell division protein ZapA AACI_RS10515 PF01588 Putative tRNA binding domain AACI_RS10515 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AACI_RS10515 PF03484 tRNA synthetase B5 domain AACI_RS10515 PF03483 B3/4 domain AACI_RS10515 PF03147 Ferredoxin-fold anticodon binding domain AACI_RS10520 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AACI_RS10520 PF01409 tRNA synthetases class II core domain (F) AACI_RS10525 PF02222 ATP-grasp domain AACI_RS10525 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AACI_RS10530 PF00731 AIR carboxylase AACI_RS10535 PF01791 DeoC/LacD family aldolase AACI_RS10540 PF00365 Phosphofructokinase AACI_RS10545 PF00311 Phosphoenolpyruvate carboxylase AACI_RS10550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACI_RS10550 PF00672 HAMP domain AACI_RS10550 PF02743 Cache domain AACI_RS10555 PF00381 PTS HPr component phosphorylation site AACI_RS10560 PF17912 MalK OB fold domain AACI_RS10560 PF00005 ABC transporter AACI_RS10560 PF03459 TOBE domain AACI_RS10570 PF03949 Malic enzyme, NAD binding domain AACI_RS10570 PF00390 Malic enzyme, N-terminal domain AACI_RS10575 PF06039 Malate:quinone oxidoreductase (Mqo) AACI_RS10580 PF02817 e3 binding domain AACI_RS10580 PF00364 Biotin-requiring enzyme AACI_RS10580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AACI_RS10585 PF16870 2-oxoglutarate dehydrogenase C-terminal AACI_RS10585 PF16078 2-oxoglutarate dehydrogenase N-terminus AACI_RS10585 PF00676 Dehydrogenase E1 component AACI_RS10585 PF02779 Transketolase, pyrimidine binding domain AACI_RS10595 PF17863 AAA lid domain AACI_RS10595 PF07726 ATPase family associated with various cellular activities (AAA) AACI_RS10610 PF01238 Phosphomannose isomerase type I AACI_RS10615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AACI_RS10615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AACI_RS10625 PF00892 EamA-like transporter family AACI_RS10630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AACI_RS10630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AACI_RS10635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AACI_RS10635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AACI_RS10640 PF01261 Xylose isomerase-like TIM barrel AACI_RS10665 PF12105 SpoU, rRNA methylase, C-terminal AACI_RS10665 PF00588 SpoU rRNA Methylase family AACI_RS10670 PF13536 Putative multidrug resistance efflux transporter AACI_RS10675 PF00583 Acetyltransferase (GNAT) family AACI_RS10675 PF00814 Glycoprotease family AACI_RS10680 PF00561 alpha/beta hydrolase fold AACI_RS10685 PF00324 Amino acid permease AACI_RS10690 PF05067 Manganese containing catalase AACI_RS10695 PF12652 CotJB protein AACI_RS10705 PF02681 Divergent PAP2 family AACI_RS10710 PF08032 RNA 2'-O ribose methyltransferase substrate binding AACI_RS10710 PF00588 SpoU rRNA Methylase family AACI_RS10715 PF00453 Ribosomal protein L20 AACI_RS10720 PF01632 Ribosomal protein L35 AACI_RS10725 PF05198 Translation initiation factor IF-3, N-terminal domain AACI_RS10725 PF00707 Translation initiation factor IF-3, C-terminal domain AACI_RS10730 PF04143 Sulphur transport AACI_RS10735 PF08241 Methyltransferase domain AACI_RS10740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AACI_RS10740 PF02824 TGS domain AACI_RS10740 PF03129 Anticodon binding domain AACI_RS10740 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AACI_RS10760 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AACI_RS10760 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AACI_RS10765 PF01261 Xylose isomerase-like TIM barrel AACI_RS10770 PF07690 Major Facilitator Superfamily AACI_RS10775 PF00149 Calcineurin-like phosphoesterase AACI_RS10800 PF00106 short chain dehydrogenase AACI_RS10810 PF00860 Permease family AACI_RS10820 PF01566 Natural resistance-associated macrophage protein AACI_RS10860 PF00313 'Cold-shock' DNA-binding domain AACI_RS10875 PF00248 Aldo/keto reductase family AACI_RS10880 PF02040 Arsenical pump membrane protein AACI_RS10895 PF00474 Sodium:solute symporter family AACI_RS10900 PF00248 Aldo/keto reductase family AACI_RS10905 PF01261 Xylose isomerase-like TIM barrel AACI_RS10915 PF01329 Pterin 4 alpha carbinolamine dehydratase AACI_RS10950 PF02675 S-adenosylmethionine decarboxylase AACI_RS10970 PF12704 MacB-like periplasmic core domain AACI_RS10970 PF02687 FtsX-like permease family AACI_RS10975 PF00005 ABC transporter AACI_RS10990 PF00571 CBS domain AACI_RS10995 PF00269 Small, acid-soluble spore proteins, alpha/beta type AACI_RS11000 PF00285 Citrate synthase, C-terminal domain AACI_RS11005 PF02659 Putative manganese efflux pump AACI_RS11010 PF02875 Mur ligase family, glutamate ligase domain AACI_RS11010 PF08245 Mur ligase middle domain AACI_RS11015 PF00694 Aconitase C-terminal domain AACI_RS11020 PF00330 Aconitase family (aconitate hydratase) AACI_RS11025 PF00180 Isocitrate/isopropylmalate dehydrogenase AACI_RS11030 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AACI_RS11030 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AACI_RS11035 PF10369 Small subunit of acetolactate synthase AACI_RS11035 PF01842 ACT domain AACI_RS11040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AACI_RS11040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AACI_RS11040 PF00205 Thiamine pyrophosphate enzyme, central domain AACI_RS11045 PF00920 Dehydratase family AACI_RS11050 PF01063 Amino-transferase class IV AACI_RS11055 PF03447 Homoserine dehydrogenase, NAD binding domain AACI_RS11055 PF00742 Homoserine dehydrogenase AACI_RS11055 PF01842 ACT domain AACI_RS11060 PF00294 pfkB family carbohydrate kinase AACI_RS11065 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS11070 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS11075 PF01547 Bacterial extracellular solute-binding protein AACI_RS11080 PF00356 Bacterial regulatory proteins, lacI family AACI_RS11095 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS11100 PF00578 AhpC/TSA family AACI_RS11100 PF10417 C-terminal domain of 1-Cys peroxiredoxin AACI_RS11105 PF02082 Transcriptional regulator AACI_RS11115 PF01476 LysM domain AACI_RS11115 PF00704 Glycosyl hydrolases family 18 AACI_RS11120 PF00324 Amino acid permease AACI_RS11150 PF00664 ABC transporter transmembrane region AACI_RS11150 PF00005 ABC transporter AACI_RS11155 PF00664 ABC transporter transmembrane region AACI_RS11155 PF00005 ABC transporter AACI_RS11170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AACI_RS11175 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS11180 PF12911 N-terminal TM domain of oligopeptide transport permease C AACI_RS11180 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS11185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AACI_RS11190 PF00005 ABC transporter AACI_RS11190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AACI_RS11195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AACI_RS11195 PF00005 ABC transporter AACI_RS11200 PF00486 Transcriptional regulatory protein, C terminal AACI_RS11200 PF00072 Response regulator receiver domain AACI_RS11205 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS11205 PF18698 Histidine kinase sensor domain AACI_RS11205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS11205 PF00672 HAMP domain AACI_RS11215 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS11215 PF18719 ArlS sensor domain AACI_RS11215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS11220 PF00486 Transcriptional regulatory protein, C terminal AACI_RS11220 PF00072 Response regulator receiver domain AACI_RS11225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AACI_RS11225 PF03466 LysR substrate binding domain AACI_RS11230 PF00709 Adenylosuccinate synthetase AACI_RS11235 PF03372 Endonuclease/Exonuclease/phosphatase family AACI_RS11245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AACI_RS11245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AACI_RS11250 PF04198 Putative sugar-binding domain AACI_RS11255 PF00485 Phosphoribulokinase / Uridine kinase family AACI_RS11260 PF00294 pfkB family carbohydrate kinase AACI_RS11265 PF13407 Periplasmic binding protein domain AACI_RS11270 PF02653 Branched-chain amino acid transport system / permease component AACI_RS11275 PF00005 ABC transporter AACI_RS11280 PF05025 RbsD / FucU transport protein family AACI_RS11285 PF00356 Bacterial regulatory proteins, lacI family AACI_RS11290 PF00664 ABC transporter transmembrane region AACI_RS11290 PF00005 ABC transporter AACI_RS11295 PF00005 ABC transporter AACI_RS11295 PF00664 ABC transporter transmembrane region AACI_RS11300 PF10114 Sensory domain found in PocR AACI_RS11300 PF12833 Helix-turn-helix domain AACI_RS11310 PF01641 SelR domain AACI_RS11320 PF00459 Inositol monophosphatase family AACI_RS11325 PF03786 D-mannonate dehydratase (UxuA) AACI_RS11330 PF02581 Thiamine monophosphate synthase AACI_RS11335 PF00294 pfkB family carbohydrate kinase AACI_RS11340 PF02595 Glycerate kinase family AACI_RS11390 PF07690 Major Facilitator Superfamily AACI_RS11400 PF00480 ROK family AACI_RS11400 PF01047 MarR family AACI_RS11405 PF00672 HAMP domain AACI_RS11405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACI_RS11405 PF02743 Cache domain AACI_RS11410 PF01547 Bacterial extracellular solute-binding protein AACI_RS11415 PF00795 Carbon-nitrogen hydrolase AACI_RS11420 PF03069 Acetamidase/Formamidase family AACI_RS11445 PF01966 HD domain AACI_RS11445 PF00072 Response regulator receiver domain AACI_RS11450 PF13089 Polyphosphate kinase N-terminal domain AACI_RS11450 PF17941 Polyphosphate kinase C-terminal domain 1 AACI_RS11450 PF13090 Polyphosphate kinase C-terminal domain 2 AACI_RS11450 PF02503 Polyphosphate kinase middle domain AACI_RS11465 PF07690 Major Facilitator Superfamily AACI_RS11485 PF08220 DeoR-like helix-turn-helix domain AACI_RS11485 PF00455 DeoR C terminal sensor domain AACI_RS11490 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AACI_RS11490 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AACI_RS11495 PF08544 GHMP kinases C terminal AACI_RS11495 PF10509 Galactokinase galactose-binding signature AACI_RS11495 PF00288 GHMP kinases N terminal domain AACI_RS11510 PF00331 Glycosyl hydrolase family 10 AACI_RS11520 PF00107 Zinc-binding dehydrogenase AACI_RS11520 PF08240 Alcohol dehydrogenase GroES-like domain AACI_RS11525 PF00924 Mechanosensitive ion channel AACI_RS11530 PF00905 Penicillin binding protein transpeptidase domain AACI_RS11530 PF03717 Penicillin-binding Protein dimerisation domain AACI_RS11560 PF02898 Nitric oxide synthase, oxygenase domain AACI_RS11565 PF01145 SPFH domain / Band 7 family AACI_RS11580 PF02829 3H domain AACI_RS11580 PF08279 HTH domain AACI_RS11585 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AACI_RS11585 PF01464 Transglycosylase SLT domain AACI_RS11590 PF01121 Dephospho-CoA kinase AACI_RS11595 PF06827 Zinc finger found in FPG and IleRS AACI_RS11595 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AACI_RS11595 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AACI_RS11600 PF00476 DNA polymerase family A AACI_RS11600 PF01367 5'-3' exonuclease, C-terminal SAM fold AACI_RS11600 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AACI_RS11605 PF01817 Chorismate mutase type II AACI_RS11605 PF01842 ACT domain AACI_RS11605 PF00800 Prephenate dehydratase AACI_RS11610 PF00056 lactate/malate dehydrogenase, NAD binding domain AACI_RS11610 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AACI_RS11615 PF00180 Isocitrate/isopropylmalate dehydrogenase AACI_RS11625 PF00072 Response regulator receiver domain AACI_RS11625 PF00486 Transcriptional regulatory protein, C terminal AACI_RS11630 PF00579 tRNA synthetases class I (W and Y) AACI_RS11635 PF02887 Pyruvate kinase, alpha/beta domain AACI_RS11635 PF00391 PEP-utilising enzyme, mobile domain AACI_RS11635 PF00224 Pyruvate kinase, barrel domain AACI_RS11640 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AACI_RS11645 PF01039 Carboxyl transferase domain AACI_RS11645 PF17848 Acetyl-coA carboxylase zinc finger domain AACI_RS11655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AACI_RS11655 PF14579 Helix-hairpin-helix motif AACI_RS11655 PF07733 Bacterial DNA polymerase III alpha NTPase domain AACI_RS11655 PF01336 OB-fold nucleic acid binding domain AACI_RS11655 PF02811 PHP domain AACI_RS11660 PF00571 CBS domain AACI_RS11660 PF03061 Thioesterase superfamily AACI_RS11660 PF00392 Bacterial regulatory proteins, gntR family AACI_RS11660 PF07085 DRTGG domain AACI_RS11665 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AACI_RS11665 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AACI_RS11685 PF00291 Pyridoxal-phosphate dependent enzyme AACI_RS11690 PF02863 Arginine repressor, C-terminal domain AACI_RS11690 PF01316 Arginine repressor, DNA binding domain AACI_RS11695 PF00817 impB/mucB/samB family AACI_RS11695 PF11798 IMS family HHH motif AACI_RS11695 PF11799 impB/mucB/samB family C-terminal domain AACI_RS11715 PF06133 Control of competence regulator ComK, YlbF/YmcA AACI_RS11720 PF01152 Bacterial-like globin AACI_RS11730 PF06508 Queuosine biosynthesis protein QueC AACI_RS11740 PF08264 Anticodon-binding domain of tRNA AACI_RS11740 PF00133 tRNA synthetases class I (I, L, M and V) AACI_RS11745 PF08386 TAP-like protein AACI_RS11745 PF00561 alpha/beta hydrolase fold AACI_RS11750 PF00132 Bacterial transferase hexapeptide (six repeats) AACI_RS11755 PF07687 Peptidase dimerisation domain AACI_RS11755 PF01546 Peptidase family M20/M25/M40 AACI_RS11760 PF06018 CodY GAF-like domain AACI_RS11760 PF08222 CodY helix-turn-helix domain AACI_RS11765 PF01371 Trp repressor protein AACI_RS11775 PF07732 Multicopper oxidase AACI_RS11775 PF00394 Multicopper oxidase AACI_RS11775 PF07731 Multicopper oxidase AACI_RS11790 PF01381 Helix-turn-helix AACI_RS11790 PF08671 Anti-repressor SinI AACI_RS11820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AACI_RS11820 PF03129 Anticodon binding domain AACI_RS11820 PF09180 Prolyl-tRNA synthetase, C-terminal AACI_RS11840 PF00107 Zinc-binding dehydrogenase AACI_RS11840 PF08240 Alcohol dehydrogenase GroES-like domain AACI_RS11845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AACI_RS11845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACI_RS11845 PF02770 Acyl-CoA dehydrogenase, middle domain AACI_RS11850 PF00501 AMP-binding enzyme AACI_RS11850 PF13193 AMP-binding enzyme C-terminal domain AACI_RS11855 PF00550 Phosphopantetheine attachment site AACI_RS11865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AACI_RS11865 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACI_RS11870 PF13193 AMP-binding enzyme C-terminal domain AACI_RS11870 PF00501 AMP-binding enzyme AACI_RS11875 PF02770 Acyl-CoA dehydrogenase, middle domain AACI_RS11875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACI_RS11875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AACI_RS11880 PF00793 DAHP synthetase I family AACI_RS11880 PF18152 DAHP synthase ferredoxin-like domain AACI_RS11890 PF03734 L,D-transpeptidase catalytic domain AACI_RS11890 PF01476 LysM domain AACI_RS11900 PF03471 Transporter associated domain AACI_RS11900 PF02080 TrkA-C domain AACI_RS11900 PF00999 Sodium/hydrogen exchanger family AACI_RS11925 PF02801 Beta-ketoacyl synthase, C-terminal domain AACI_RS11925 PF00109 Beta-ketoacyl synthase, N-terminal domain AACI_RS11935 PF00248 Aldo/keto reductase family AACI_RS11945 PF02743 Cache domain AACI_RS11945 PF00672 HAMP domain AACI_RS11945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACI_RS11955 PF00551 Formyl transferase AACI_RS11955 PF01842 ACT domain AACI_RS11970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AACI_RS11975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AACI_RS11975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AACI_RS11980 PF01507 Phosphoadenosine phosphosulfate reductase family AACI_RS11985 PF10414 Sirohaem synthase dimerisation region AACI_RS11985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AACI_RS11990 PF07690 Major Facilitator Superfamily AACI_RS12000 PF03717 Penicillin-binding Protein dimerisation domain AACI_RS12000 PF00905 Penicillin binding protein transpeptidase domain AACI_RS12005 PF00535 Glycosyl transferase family 2 AACI_RS12010 PF01476 LysM domain AACI_RS12010 PF00877 NlpC/P60 family AACI_RS12010 PF08239 Bacterial SH3 domain AACI_RS12015 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) AACI_RS12025 PF03845 Spore germination protein AACI_RS12035 PF05504 Spore germination B3/ GerAC like, C-terminal AACI_RS12040 PF03323 Bacillus/Clostridium GerA spore germination protein AACI_RS12045 PF13180 PDZ domain AACI_RS12065 PF13243 Squalene-hopene cyclase C-terminal domain AACI_RS12065 PF13249 Squalene-hopene cyclase N-terminal domain AACI_RS12070 PF01370 NAD dependent epimerase/dehydratase family AACI_RS12080 PF06463 Molybdenum Cofactor Synthesis C AACI_RS12080 PF04055 Radical SAM superfamily AACI_RS12085 PF01070 FMN-dependent dehydrogenase AACI_RS12090 PF02779 Transketolase, pyrimidine binding domain AACI_RS12090 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AACI_RS12090 PF02780 Transketolase, C-terminal domain AACI_RS12110 PF00501 AMP-binding enzyme AACI_RS12110 PF01553 Acyltransferase AACI_RS12125 PF07731 Multicopper oxidase AACI_RS12125 PF00394 Multicopper oxidase AACI_RS12125 PF07732 Multicopper oxidase AACI_RS12130 PF07732 Multicopper oxidase AACI_RS12130 PF07731 Multicopper oxidase AACI_RS12135 PF00295 Glycosyl hydrolases family 28 AACI_RS12140 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS12145 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS12160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AACI_RS12160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AACI_RS12165 PF00356 Bacterial regulatory proteins, lacI family AACI_RS12170 PF01613 Flavin reductase like domain AACI_RS12185 PF03951 Glutamine synthetase, beta-Grasp domain AACI_RS12185 PF00120 Glutamine synthetase, catalytic domain AACI_RS12190 PF00909 Ammonium Transporter Family AACI_RS12195 PF13419 Haloacid dehalogenase-like hydrolase AACI_RS12200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AACI_RS12200 PF00005 ABC transporter AACI_RS12205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AACI_RS12205 PF00005 ABC transporter AACI_RS12210 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS12210 PF12911 N-terminal TM domain of oligopeptide transport permease C AACI_RS12215 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS12220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AACI_RS12225 PF00759 Glycosyl hydrolase family 9 AACI_RS12225 PF02927 Cellulase N-terminal ig-like domain AACI_RS12230 PF02445 Quinolinate synthetase A protein AACI_RS12235 PF02910 Fumarate reductase flavoprotein C-term AACI_RS12235 PF00890 FAD binding domain AACI_RS12240 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AACI_RS12240 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AACI_RS12250 PF00899 ThiF family AACI_RS12255 PF05690 Thiazole biosynthesis protein ThiG AACI_RS12265 PF01266 FAD dependent oxidoreductase AACI_RS12270 PF02581 Thiamine monophosphate synthase AACI_RS12275 PF02833 DHHA2 domain AACI_RS12275 PF01368 DHH family AACI_RS12285 PF07690 Major Facilitator Superfamily AACI_RS12300 PF13171 Protein of unknown function (DUF4004) AACI_RS12305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AACI_RS12310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AACI_RS12320 PF01370 NAD dependent epimerase/dehydratase family AACI_RS12320 PF08338 Domain of unknown function (DUF1731) AACI_RS12325 PF07690 Major Facilitator Superfamily AACI_RS12355 PF01965 DJ-1/PfpI family AACI_RS12360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACI_RS12365 PF13520 Amino acid permease AACI_RS12370 PF00171 Aldehyde dehydrogenase family AACI_RS12390 PF00535 Glycosyl transferase family 2 AACI_RS12390 PF13181 Tetratricopeptide repeat AACI_RS12400 PF03466 LysR substrate binding domain AACI_RS12400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AACI_RS12410 PF00239 Resolvase, N terminal domain AACI_RS12415 PF12323 Helix-turn-helix domain AACI_RS12415 PF01385 Probable transposase AACI_RS12415 PF07282 Putative transposase DNA-binding domain AACI_RS12420 PF07690 Major Facilitator Superfamily AACI_RS12430 PF00107 Zinc-binding dehydrogenase AACI_RS12430 PF08240 Alcohol dehydrogenase GroES-like domain AACI_RS12435 PF13192 Thioredoxin domain AACI_RS12435 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACI_RS12440 PF00578 AhpC/TSA family AACI_RS12445 PF01475 Ferric uptake regulator family AACI_RS12460 PF00324 Amino acid permease AACI_RS12465 PF01619 Proline dehydrogenase AACI_RS12470 PF02954 Bacterial regulatory protein, Fis family AACI_RS12470 PF00158 Sigma-54 interaction domain AACI_RS12475 PF02913 FAD linked oxidases, C-terminal domain AACI_RS12475 PF01565 FAD binding domain AACI_RS12480 PF07690 Major Facilitator Superfamily AACI_RS12485 PF12146 Serine aminopeptidase, S33 AACI_RS12490 PF02652 L-lactate permease AACI_RS12495 PF01274 Malate synthase AACI_RS12500 PF09339 IclR helix-turn-helix domain AACI_RS12500 PF01614 Bacterial transcriptional regulator AACI_RS12505 PF01565 FAD binding domain AACI_RS12505 PF02913 FAD linked oxidases, C-terminal domain AACI_RS12510 PF13183 4Fe-4S dicluster domain AACI_RS12510 PF02754 Cysteine-rich domain AACI_RS12515 PF02913 FAD linked oxidases, C-terminal domain AACI_RS12515 PF01565 FAD binding domain AACI_RS12520 PF00535 Glycosyl transferase family 2 AACI_RS12535 PF01022 Bacterial regulatory protein, arsR family AACI_RS12580 PF05496 Holliday junction DNA helicase RuvB P-loop domain AACI_RS12580 PF05491 RuvB C-terminal winged helix domain AACI_RS12580 PF17864 RuvB AAA lid domain AACI_RS12600 PF04199 Putative cyclase AACI_RS12605 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AACI_RS12605 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AACI_RS12610 PF00472 RF-1 domain AACI_RS12610 PF03462 PCRF domain AACI_RS12615 PF02810 SEC-C motif AACI_RS12615 PF07517 SecA DEAD-like domain AACI_RS12615 PF01043 SecA preprotein cross-linking domain AACI_RS12615 PF07516 SecA Wing and Scaffold domain AACI_RS12620 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AACI_RS12620 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AACI_RS12640 PF00535 Glycosyl transferase family 2 AACI_RS12650 PF00535 Glycosyl transferase family 2 AACI_RS12650 PF13181 Tetratricopeptide repeat AACI_RS12655 PF07196 Flagellin hook IN motif AACI_RS12655 PF02465 Flagellar hook-associated protein 2 N-terminus AACI_RS12655 PF07195 Flagellar hook-associated protein 2 C-terminus AACI_RS12660 PF00700 Bacterial flagellin C-terminal helical region AACI_RS12660 PF07196 Flagellin hook IN motif AACI_RS12660 PF00669 Bacterial flagellin N-terminal helical region AACI_RS12665 PF00700 Bacterial flagellin C-terminal helical region AACI_RS12665 PF00669 Bacterial flagellin N-terminal helical region AACI_RS12695 PF00156 Phosphoribosyl transferase domain AACI_RS12700 PF00989 PAS fold AACI_RS12700 PF16736 Single Cache-like AACI_RS12700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS12700 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS12705 PF00486 Transcriptional regulatory protein, C terminal AACI_RS12705 PF00072 Response regulator receiver domain AACI_RS12720 PF00072 Response regulator receiver domain AACI_RS12720 PF00196 Bacterial regulatory proteins, luxR family AACI_RS12725 PF02772 S-adenosylmethionine synthetase, central domain AACI_RS12725 PF02773 S-adenosylmethionine synthetase, C-terminal domain AACI_RS12725 PF00438 S-adenosylmethionine synthetase, N-terminal domain AACI_RS12730 PF03808 Glycosyl transferase WecB/TagA/CpsF family AACI_RS12735 PF07690 Major Facilitator Superfamily AACI_RS12740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AACI_RS12740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AACI_RS12740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AACI_RS12740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AACI_RS12745 PF01425 Amidase AACI_RS12750 PF01967 MoaC family AACI_RS12750 PF00994 Probable molybdopterin binding domain AACI_RS12755 PF14748 Pyrroline-5-carboxylate reductase dimerisation AACI_RS12755 PF03807 NADP oxidoreductase coenzyme F420-dependent AACI_RS12760 PF12146 Serine aminopeptidase, S33 AACI_RS12815 PF02567 Phenazine biosynthesis-like protein AACI_RS12820 PF03109 ABC1 family AACI_RS12830 PF01479 S4 domain AACI_RS12830 PF00849 RNA pseudouridylate synthase AACI_RS12850 PF02424 ApbE family AACI_RS12860 PF00356 Bacterial regulatory proteins, lacI family AACI_RS12865 PF00248 Aldo/keto reductase family AACI_RS12870 PF02683 Cytochrome C biogenesis protein transmembrane region AACI_RS12875 PF08534 Redoxin AACI_RS12885 PF13472 GDSL-like Lipase/Acylhydrolase family AACI_RS12895 PF02424 ApbE family AACI_RS12915 PF07690 Major Facilitator Superfamily AACI_RS12920 PF02569 Pantoate-beta-alanine ligase AACI_RS12925 PF02548 Ketopantoate hydroxymethyltransferase AACI_RS12940 PF07690 Major Facilitator Superfamily AACI_RS12950 PF01475 Ferric uptake regulator family AACI_RS12955 PF01297 Zinc-uptake complex component A periplasmic AACI_RS12960 PF00005 ABC transporter AACI_RS12975 PF03061 Thioesterase superfamily AACI_RS12980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AACI_RS12980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AACI_RS12990 PF00990 Diguanylate cyclase, GGDEF domain AACI_RS12990 PF00563 EAL domain AACI_RS12990 PF03707 Bacterial signalling protein N terminal repeat AACI_RS12995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AACI_RS12995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AACI_RS13000 PF07690 Major Facilitator Superfamily AACI_RS13010 PF04234 CopC domain AACI_RS13010 PF05425 Copper resistance protein D AACI_RS13010 PF13115 YtkA-like AACI_RS13015 PF07987 Domain of unkown function (DUF1775) AACI_RS13020 PF01384 Phosphate transporter family AACI_RS13035 PF00480 ROK family AACI_RS13035 PF01047 MarR family AACI_RS13040 PF00933 Glycosyl hydrolase family 3 N terminal domain AACI_RS13040 PF14310 Fibronectin type III-like domain AACI_RS13040 PF01915 Glycosyl hydrolase family 3 C-terminal domain AACI_RS13045 PF01569 PAP2 superfamily AACI_RS13060 PF08281 Sigma-70, region 4 AACI_RS13060 PF04542 Sigma-70 region 2 AACI_RS13085 PF02583 Metal-sensitive transcriptional repressor AACI_RS13090 PF01925 Sulfite exporter TauE/SafE AACI_RS13095 PF00581 Rhodanese-like domain AACI_RS13095 PF00753 Metallo-beta-lactamase superfamily AACI_RS13100 PF01206 Sulfurtransferase TusA AACI_RS13100 PF00581 Rhodanese-like domain AACI_RS13105 PF13686 DsrE/DsrF/DrsH-like family AACI_RS13110 PF00581 Rhodanese-like domain AACI_RS13115 PF01925 Sulfite exporter TauE/SafE AACI_RS13140 PF09827 CRISPR associated protein Cas2 AACI_RS13145 PF01867 CRISPR associated protein Cas1 AACI_RS13155 PF01964 Radical SAM ThiC family AACI_RS13155 PF13667 ThiC-associated domain AACI_RS13170 PF02086 D12 class N6 adenine-specific DNA methyltransferase AACI_RS13175 PF00403 Heavy-metal-associated domain AACI_RS13180 PF02583 Metal-sensitive transcriptional repressor AACI_RS13185 PF03780 Asp23 family, cell envelope-related function AACI_RS13200 PF03780 Asp23 family, cell envelope-related function AACI_RS13205 PF01037 Lrp/AsnC ligand binding domain AACI_RS13210 PF00155 Aminotransferase class I and II AACI_RS13220 PF00107 Zinc-binding dehydrogenase AACI_RS13220 PF08240 Alcohol dehydrogenase GroES-like domain AACI_RS13225 PF00440 Bacterial regulatory proteins, tetR family AACI_RS13230 PF00202 Aminotransferase class-III AACI_RS13235 PF01380 SIS domain AACI_RS13240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AACI_RS13240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AACI_RS13240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AACI_RS13240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AACI_RS13245 PF07949 YbbR-like protein AACI_RS13250 PF02457 DisA bacterial checkpoint controller nucleotide-binding AACI_RS13260 PF01522 Polysaccharide deacetylase AACI_RS13270 PF10609 NUBPL iron-transfer P-loop NTPase AACI_RS13280 PF01520 N-acetylmuramoyl-L-alanine amidase AACI_RS13285 PF00380 Ribosomal protein S9/S16 AACI_RS13290 PF00572 Ribosomal protein L13 AACI_RS13295 PF01416 tRNA pseudouridine synthase AACI_RS13300 PF01196 Ribosomal protein L17 AACI_RS13305 PF01000 RNA polymerase Rpb3/RpoA insert domain AACI_RS13305 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AACI_RS13305 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AACI_RS13310 PF01479 S4 domain AACI_RS13310 PF00163 Ribosomal protein S4/S9 N-terminal domain AACI_RS13315 PF00411 Ribosomal protein S11 AACI_RS13320 PF00416 Ribosomal protein S13/S18 AACI_RS13325 PF00444 Ribosomal protein L36 AACI_RS13330 PF01176 Translation initiation factor 1A / IF-1 AACI_RS13340 PF05191 Adenylate kinase, active site lid AACI_RS13345 PF00344 SecY translocase AACI_RS13350 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AACI_RS13355 PF00327 Ribosomal protein L30p/L7e AACI_RS13360 PF00333 Ribosomal protein S5, N-terminal domain AACI_RS13360 PF03719 Ribosomal protein S5, C-terminal domain AACI_RS13365 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AACI_RS13370 PF00347 Ribosomal protein L6 AACI_RS13375 PF00410 Ribosomal protein S8 AACI_RS13380 PF00253 Ribosomal protein S14p/S29e AACI_RS13385 PF00281 Ribosomal protein L5 AACI_RS13385 PF00673 ribosomal L5P family C-terminus AACI_RS13390 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AACI_RS13390 PF00467 KOW motif AACI_RS13395 PF00238 Ribosomal protein L14p/L23e AACI_RS13400 PF00366 Ribosomal protein S17 AACI_RS13405 PF00831 Ribosomal L29 protein AACI_RS13410 PF00252 Ribosomal protein L16p/L10e AACI_RS13415 PF00189 Ribosomal protein S3, C-terminal domain AACI_RS13415 PF07650 KH domain AACI_RS13420 PF00237 Ribosomal protein L22p/L17e AACI_RS13425 PF00203 Ribosomal protein S19 AACI_RS13430 PF03947 Ribosomal Proteins L2, C-terminal domain AACI_RS13430 PF00181 Ribosomal Proteins L2, RNA binding domain AACI_RS13435 PF00276 Ribosomal protein L23 AACI_RS13440 PF00573 Ribosomal protein L4/L1 family AACI_RS13445 PF00297 Ribosomal protein L3 AACI_RS13450 PF00338 Ribosomal protein S10p/S20e AACI_RS13455 PF03144 Elongation factor Tu domain 2 AACI_RS13455 PF03143 Elongation factor Tu C-terminal domain AACI_RS13455 PF00009 Elongation factor Tu GTP binding domain AACI_RS13460 PF14492 Elongation Factor G, domain II AACI_RS13460 PF03764 Elongation factor G, domain IV AACI_RS13460 PF00009 Elongation factor Tu GTP binding domain AACI_RS13460 PF03144 Elongation factor Tu domain 2 AACI_RS13460 PF00679 Elongation factor G C-terminus AACI_RS13465 PF00177 Ribosomal protein S7p/S5e AACI_RS13470 PF00164 Ribosomal protein S12/S23 AACI_RS13475 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AACI_RS13480 PF00623 RNA polymerase Rpb1, domain 2 AACI_RS13480 PF04997 RNA polymerase Rpb1, domain 1 AACI_RS13480 PF04983 RNA polymerase Rpb1, domain 3 AACI_RS13480 PF05000 RNA polymerase Rpb1, domain 4 AACI_RS13480 PF04998 RNA polymerase Rpb1, domain 5 AACI_RS13485 PF04560 RNA polymerase Rpb2, domain 7 AACI_RS13485 PF00562 RNA polymerase Rpb2, domain 6 AACI_RS13485 PF10385 RNA polymerase beta subunit external 1 domain AACI_RS13485 PF04565 RNA polymerase Rpb2, domain 3 AACI_RS13485 PF04561 RNA polymerase Rpb2, domain 2 AACI_RS13485 PF04563 RNA polymerase beta subunit AACI_RS13490 PF05175 Methyltransferase small domain AACI_RS13495 PF16320 Ribosomal protein L7/L12 dimerisation domain AACI_RS13495 PF00542 Ribosomal protein L7/L12 C-terminal domain AACI_RS13500 PF00466 Ribosomal protein L10 AACI_RS13505 PF00687 Ribosomal protein L1p/L10e family AACI_RS13510 PF03946 Ribosomal protein L11, N-terminal domain AACI_RS13510 PF00298 Ribosomal protein L11, RNA binding domain AACI_RS13515 PF02357 Transcription termination factor nusG AACI_RS13515 PF00467 KOW motif AACI_RS13525 PF00471 Ribosomal protein L33 AACI_RS13530 PF08281 Sigma-70, region 4 AACI_RS13530 PF04542 Sigma-70 region 2 AACI_RS13540 PF08032 RNA 2'-O ribose methyltransferase substrate binding AACI_RS13540 PF00588 SpoU rRNA Methylase family AACI_RS13545 PF00636 Ribonuclease III domain AACI_RS13550 PF09190 DALR domain AACI_RS13550 PF01406 tRNA synthetases class I (C) catalytic domain AACI_RS13555 PF00749 tRNA synthetases class I (E and Q), catalytic domain AACI_RS13560 PF02542 YgbB family AACI_RS13565 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AACI_RS13575 PF01066 CDP-alcohol phosphatidyltransferase AACI_RS13580 PF10635 DisA bacterial checkpoint controller linker region AACI_RS13580 PF02457 DisA bacterial checkpoint controller nucleotide-binding AACI_RS13585 PF18073 Rubredoxin metal binding domain AACI_RS13590 PF00004 ATPase family associated with various cellular activities (AAA) AACI_RS13590 PF07724 AAA domain (Cdc48 subfamily) AACI_RS13590 PF02861 Clp amino terminal domain, pathogenicity island component AACI_RS13590 PF10431 C-terminal, D2-small domain, of ClpB protein AACI_RS13590 PF17871 AAA lid domain AACI_RS13595 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain AACI_RS13600 PF02151 UvrB/uvrC motif AACI_RS13605 PF17727 CtsR C-terminal dimerization domain AACI_RS13605 PF05848 CtsR N-terminal HTH domain AACI_RS13615 PF07977 FabA-like domain AACI_RS13620 PF01066 CDP-alcohol phosphatidyltransferase AACI_RS13625 PF00460 Flagella basal body rod protein AACI_RS13625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AACI_RS13630 PF00460 Flagella basal body rod protein AACI_RS13630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AACI_RS13640 PF12116 Stage III sporulation protein D AACI_RS13645 PF01551 Peptidase family M23 AACI_RS13655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AACI_RS13670 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AACI_RS13670 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AACI_RS13675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AACI_RS13675 PF02874 ATP synthase alpha/beta family, beta-barrel domain AACI_RS13680 PF00231 ATP synthase AACI_RS13685 PF02874 ATP synthase alpha/beta family, beta-barrel domain AACI_RS13685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AACI_RS13685 PF00306 ATP synthase alpha/beta chain, C terminal domain AACI_RS13690 PF00213 ATP synthase delta (OSCP) subunit AACI_RS13695 PF00430 ATP synthase B/B' CF(0) AACI_RS13700 PF00137 ATP synthase subunit C AACI_RS13705 PF00119 ATP synthase A chain AACI_RS13720 PF02350 UDP-N-acetylglucosamine 2-epimerase AACI_RS13730 PF00464 Serine hydroxymethyltransferase AACI_RS13735 PF04260 Protein of unknown function (DUF436) AACI_RS13740 PF01451 Low molecular weight phosphotyrosine protein phosphatase AACI_RS13745 PF02659 Putative manganese efflux pump AACI_RS13755 PF06912 Protein of unknown function (DUF1275) AACI_RS13775 PF03481 Putative GTP-binding controlling metal-binding AACI_RS13775 PF01300 Telomere recombination AACI_RS13780 PF09551 Stage II sporulation protein R (spore_II_R) AACI_RS13785 PF17827 PrmC N-terminal domain AACI_RS13785 PF05175 Methyltransferase small domain AACI_RS13790 PF03462 PCRF domain AACI_RS13790 PF00472 RF-1 domain AACI_RS13795 PF01197 Ribosomal protein L31 AACI_RS13800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AACI_RS13800 PF07497 Rho termination factor, RNA-binding domain AACI_RS13800 PF07498 Rho termination factor, N-terminal domain AACI_RS13805 PF00923 Transaldolase/Fructose-6-phosphate aldolase AACI_RS13810 PF00072 Response regulator receiver domain AACI_RS13815 PF06418 CTP synthase N-terminus AACI_RS13815 PF00117 Glutamine amidotransferase class-I AACI_RS13820 PF05066 HB1, ASXL, restriction endonuclease HTH domain AACI_RS13825 PF00378 Enoyl-CoA hydratase/isomerase AACI_RS13830 PF03746 LamB/YcsF family AACI_RS13835 PF02626 Carboxyltransferase domain, subdomain A and B AACI_RS13840 PF02682 Carboxyltransferase domain, subdomain C and D AACI_RS13845 PF00535 Glycosyl transferase family 2 AACI_RS13845 PF01501 Glycosyl transferase family 8 AACI_RS13855 PF00491 Arginase family AACI_RS13860 PF17284 Spermidine synthase tetramerisation domain AACI_RS13865 PF02770 Acyl-CoA dehydrogenase, middle domain AACI_RS13865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AACI_RS13865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACI_RS13870 PF08240 Alcohol dehydrogenase GroES-like domain AACI_RS13870 PF00107 Zinc-binding dehydrogenase AACI_RS13875 PF00905 Penicillin binding protein transpeptidase domain AACI_RS13875 PF00912 Transglycosylase AACI_RS13880 PF00155 Aminotransferase class I and II AACI_RS13910 PF04055 Radical SAM superfamily AACI_RS13910 PF06463 Molybdenum Cofactor Synthesis C AACI_RS13915 PF02142 MGS-like domain AACI_RS13920 PF05195 Aminopeptidase P, N-terminal domain AACI_RS13920 PF00557 Metallopeptidase family M24 AACI_RS13940 PF07690 Major Facilitator Superfamily AACI_RS13945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AACI_RS13945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AACI_RS13955 PF01053 Cys/Met metabolism PLP-dependent enzyme AACI_RS13960 PF03601 Conserved hypothetical protein 698 AACI_RS13970 PF01227 GTP cyclohydrolase I AACI_RS13975 PF00348 Polyprenyl synthetase AACI_RS13985 PF01593 Flavin containing amine oxidoreductase AACI_RS13990 PF00258 Flavodoxin AACI_RS13990 PF00175 Oxidoreductase NAD-binding domain AACI_RS13990 PF00067 Cytochrome P450 AACI_RS13990 PF00667 FAD binding domain AACI_RS14000 PF02660 Glycerol-3-phosphate acyltransferase AACI_RS14005 PF00535 Glycosyl transferase family 2 AACI_RS14020 PF02560 Cyanate lyase C-terminal domain AACI_RS14025 PF12867 DinB superfamily AACI_RS14035 PF00356 Bacterial regulatory proteins, lacI family AACI_RS14040 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AACI_RS14040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AACI_RS14045 PF01048 Phosphorylase superfamily AACI_RS14050 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AACI_RS14050 PF00132 Bacterial transferase hexapeptide (six repeats) AACI_RS14050 PF14602 Hexapeptide repeat of succinyl-transferase AACI_RS14055 PF07687 Peptidase dimerisation domain AACI_RS14055 PF01546 Peptidase family M20/M25/M40 AACI_RS14060 PF00155 Aminotransferase class I and II AACI_RS14080 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AACI_RS14080 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AACI_RS14085 PF08402 TOBE domain AACI_RS14085 PF00005 ABC transporter AACI_RS14090 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS14095 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS14105 PF00005 ABC transporter AACI_RS14110 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS14115 PF00296 Luciferase-like monooxygenase AACI_RS14120 PF09084 NMT1/THI5 like AACI_RS14125 PF03358 NADPH-dependent FMN reductase AACI_RS14130 PF13411 MerR HTH family regulatory protein AACI_RS14135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACI_RS14135 PF02770 Acyl-CoA dehydrogenase, middle domain AACI_RS14135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AACI_RS14145 PF04055 Radical SAM superfamily AACI_RS14145 PF06968 Biotin and Thiamin Synthesis associated domain AACI_RS14155 PF00155 Aminotransferase class I and II AACI_RS14160 PF00202 Aminotransferase class-III AACI_RS14165 PF01494 FAD binding domain AACI_RS14170 PF03649 Uncharacterised protein family (UPF0014) AACI_RS14175 PF00005 ABC transporter AACI_RS14180 PF00107 Zinc-binding dehydrogenase AACI_RS14180 PF16884 N-terminal domain of oxidoreductase AACI_RS14200 PF02558 Ketopantoate reductase PanE/ApbA AACI_RS14200 PF08546 Ketopantoate reductase PanE/ApbA C terminal AACI_RS14210 PF00990 Diguanylate cyclase, GGDEF domain AACI_RS14215 PF01055 Glycosyl hydrolases family 31 AACI_RS14215 PF13802 Galactose mutarotase-like AACI_RS14215 PF17137 Domain of unknown function (DUF5110) AACI_RS14215 PF16338 Domain of unknown function (DUF4968) AACI_RS14230 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AACI_RS14230 PF00356 Bacterial regulatory proteins, lacI family AACI_RS14235 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS14240 PF00528 Binding-protein-dependent transport system inner membrane component AACI_RS14245 PF01547 Bacterial extracellular solute-binding protein AACI_RS14250 PF00395 S-layer homology domain AACI_RS14250 PF00128 Alpha amylase, catalytic domain AACI_RS14250 PF02903 Alpha amylase, N-terminal ig-like domain AACI_RS14255 PF07859 alpha/beta hydrolase fold AACI_RS14260 PF05726 Pirin C-terminal cupin domain AACI_RS14260 PF02678 Pirin AACI_RS14265 PF00293 NUDIX domain AACI_RS14275 PF07690 Major Facilitator Superfamily AACI_RS14295 PF00171 Aldehyde dehydrogenase family AACI_RS14300 PF01472 PUA domain AACI_RS14300 PF00696 Amino acid kinase family AACI_RS14305 PF01557 Fumarylacetoacetate (FAA) hydrolase family AACI_RS14310 PF01055 Glycosyl hydrolases family 31 AACI_RS14310 PF13802 Galactose mutarotase-like AACI_RS14315 PF00582 Universal stress protein family AACI_RS14320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AACI_RS14330 PF10114 Sensory domain found in PocR AACI_RS14330 PF12833 Helix-turn-helix domain AACI_RS14335 PF08532 Beta-galactosidase trimerisation domain AACI_RS14335 PF08533 Beta-galactosidase C-terminal domain AACI_RS14335 PF02449 Beta-galactosidase AACI_RS14340 PF00909 Ammonium Transporter Family AACI_RS14345 PF00543 Nitrogen regulatory protein P-II AACI_RS14350 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AACI_RS14360 PF13685 Iron-containing alcohol dehydrogenase AACI_RS14365 PF11762 L-arabinose isomerase C-terminal domain AACI_RS14365 PF02610 L-arabinose isomerase AACI_RS14370 PF00596 Class II Aldolase and Adducin N-terminal domain AACI_RS14375 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AACI_RS14375 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AACI_RS14380 PF00083 Sugar (and other) transporter AACI_RS14385 PF00392 Bacterial regulatory proteins, gntR family AACI_RS14395 PF02653 Branched-chain amino acid transport system / permease component AACI_RS14400 PF00005 ABC transporter AACI_RS14405 PF00392 Bacterial regulatory proteins, gntR family AACI_RS14415 PF07944 Beta-L-arabinofuranosidase, GH127 AACI_RS14425 PF07690 Major Facilitator Superfamily AACI_RS14435 PF00226 DnaJ domain AACI_RS14435 PF00684 DnaJ central domain AACI_RS14435 PF01556 DnaJ C terminal domain AACI_RS14440 PF00106 short chain dehydrogenase AACI_RS14445 PF00360 Phytochrome region AACI_RS14445 PF00990 Diguanylate cyclase, GGDEF domain AACI_RS14445 PF01590 GAF domain AACI_RS14445 PF00563 EAL domain AACI_RS14455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AACI_RS14455 PF03466 LysR substrate binding domain AACI_RS14460 PF02590 Predicted SPOUT methyltransferase AACI_RS14465 PF13180 PDZ domain AACI_RS14470 PF00753 Metallo-beta-lactamase superfamily AACI_RS14485 PF00672 HAMP domain AACI_RS14485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACI_RS14485 PF13426 PAS domain AACI_RS14485 PF00512 His Kinase A (phospho-acceptor) domain AACI_RS14490 PF00072 Response regulator receiver domain AACI_RS14490 PF00486 Transcriptional regulatory protein, C terminal AACI_RS14500 PF00772 DnaB-like helicase N terminal domain AACI_RS14500 PF03796 DnaB-like helicase C terminal domain AACI_RS14505 PF01281 Ribosomal protein L9, N-terminal domain AACI_RS14505 PF03948 Ribosomal protein L9, C-terminal domain AACI_RS14515 PF01084 Ribosomal protein S18 AACI_RS14520 PF00436 Single-strand binding protein family AACI_RS14525 PF01250 Ribosomal protein S6 AACI_RS14530 PF01926 50S ribosome-binding GTPase AACI_RS14530 PF06071 Protein of unknown function (DUF933) AACI_RS14535 PF01568 Molydopterin dinucleotide binding domain AACI_RS14535 PF00384 Molybdopterin oxidoreductase AACI_RS14535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AACI_RS14540 PF06107 Bacterial protein of unknown function (DUF951) AACI_RS14545 PF00924 Mechanosensitive ion channel AACI_RS14555 PF06866 Protein of unknown function (DUF1256) AACI_RS14565 PF04474 Protein of unknown function (DUF554) AACI_RS14570 PF02195 ParB-like nuclease domain AACI_RS14570 PF17762 HTH domain found in ParB protein AACI_RS14575 PF13614 AAA domain AACI_RS14580 PF17762 HTH domain found in ParB protein AACI_RS14580 PF02195 ParB-like nuclease domain AACI_RS14585 PF02527 rRNA small subunit methyltransferase G AACI_RS14590 PF01134 Glucose inhibited division protein A AACI_RS14590 PF13932 GidA associated domain AACI_RS14595 PF01926 50S ribosome-binding GTPase AACI_RS14595 PF12631 MnmE helical domain AACI_RS14595 PF10396 GTP-binding protein TrmE N-terminus AACI_RS14600 PF01424 R3H domain AACI_RS14600 PF14804 Jag N-terminus AACI_RS14605 PF02096 60Kd inner membrane protein AACI_RS14610 PF01809 Putative membrane protein insertion efficiency factor AACI_RS14615 PF00825 Ribonuclease P AACI_RS14620 PF00468 Ribosomal protein L34 AACI_RS14645 PF02463 RecF/RecN/SMC N terminal domain AACI_RS14840 PF00005 ABC transporter AACI_RS14985 PF07477 Glycosyl hydrolase family 67 C-terminus AACI_RS14985 PF07488 Glycosyl hydrolase family 67 middle domain AACI_RS14985 PF03648 Glycosyl hydrolase family 67 N-terminus AACI_RS15045 PF08299 Bacterial dnaA protein helix-turn-helix AACI_RS15045 PF11638 DnaA N-terminal domain AACI_RS15045 PF00308 Bacterial dnaA protein AACI_RS15055 PF02767 DNA polymerase III beta subunit, central domain AACI_RS15055 PF02768 DNA polymerase III beta subunit, C-terminal domain AACI_RS15055 PF00712 DNA polymerase III beta subunit, N-terminal domain AACI_RS15070 PF03989 DNA gyrase C-terminal domain, beta-propeller AACI_RS15070 PF00521 DNA gyrase/topoisomerase IV, subunit A AACI_RS15115 PF00571 CBS domain AACI_RS15115 PF00478 IMP dehydrogenase / GMP reductase domain AACI_RS15290 PF00486 Transcriptional regulatory protein, C terminal AACI_RS15290 PF00072 Response regulator receiver domain AACI_RS15530 PF00565 Staphylococcal nuclease homologue AACI_RS15565 PF00174 Oxidoreductase molybdopterin binding domain AACI_RS15595 PF00072 Response regulator receiver domain AACI_RS15600 PF00005 ABC transporter AACI_RS15605 PF04542 Sigma-70 region 2 AACI_RS15605 PF08281 Sigma-70, region 4 AACI_RS15625 PF00561 alpha/beta hydrolase fold AACI_RS15635 PF00563 EAL domain AACI_RS15635 PF00990 Diguanylate cyclase, GGDEF domain AACI_RS15635 PF03707 Bacterial signalling protein N terminal repeat