locus-tag class description TC41_RS00005 PF11638 DnaA N-terminal domain TC41_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix TC41_RS00005 PF00308 Bacterial dnaA protein TC41_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain TC41_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain TC41_RS00010 PF02767 DNA polymerase III beta subunit, central domain TC41_RS00020 PF02463 RecF/RecN/SMC N terminal domain TC41_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus TC41_RS00025 PF00204 DNA gyrase B TC41_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS00025 PF01751 Toprim domain TC41_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller TC41_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A TC41_RS00065 PF00478 IMP dehydrogenase / GMP reductase domain TC41_RS00065 PF00571 CBS domain TC41_RS00070 PF01680 SOR/SNZ family TC41_RS00075 PF01174 SNO glutamine amidotransferase family TC41_RS00080 PF02403 Seryl-tRNA synthetase N-terminal domain TC41_RS00080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TC41_RS00105 PF13005 zinc-finger binding domain of transposase IS66 TC41_RS00105 PF03050 Transposase IS66 family TC41_RS00105 PF13817 IS66 C-terminal element TC41_RS00105 PF13007 Transposase C of IS166 homeodomain TC41_RS00125 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TC41_RS00125 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TC41_RS00145 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TC41_RS00145 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TC41_RS00145 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TC41_RS00150 PF00463 Isocitrate lyase family TC41_RS00160 PF07282 Putative transposase DNA-binding domain TC41_RS00160 PF12323 Helix-turn-helix domain TC41_RS00160 PF01385 Probable transposase TC41_RS00165 PF00239 Resolvase, N terminal domain TC41_RS00175 PF02653 Branched-chain amino acid transport system / permease component TC41_RS00190 PF02608 ABC transporter substrate-binding protein PnrA-like TC41_RS00200 PF00857 Isochorismatase family TC41_RS00205 PF16123 Hydroxyacylglutathione hydrolase C-terminus TC41_RS00205 PF00753 Metallo-beta-lactamase superfamily TC41_RS00210 PF03061 Thioesterase superfamily TC41_RS00220 PF00005 ABC transporter TC41_RS00220 PF08402 TOBE domain TC41_RS00235 PF01061 ABC-2 type transporter TC41_RS00240 PF13732 Domain of unknown function (DUF4162) TC41_RS00240 PF00005 ABC transporter TC41_RS00245 PF00248 Aldo/keto reductase family TC41_RS00250 PF00248 Aldo/keto reductase family TC41_RS00255 PF06719 AraC-type transcriptional regulator N-terminus TC41_RS00255 PF12833 Helix-turn-helix domain TC41_RS00260 PF00486 Transcriptional regulatory protein, C terminal TC41_RS00260 PF00072 Response regulator receiver domain TC41_RS00265 PF00989 PAS fold TC41_RS00265 PF00512 His Kinase A (phospho-acceptor) domain TC41_RS00265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS00265 PF16736 Single Cache-like TC41_RS00275 PF01810 LysE type translocator TC41_RS00285 PF00356 Bacterial regulatory proteins, lacI family TC41_RS00290 PF04309 Glycerol-3-phosphate responsive antiterminator TC41_RS00295 PF07690 Major Facilitator Superfamily TC41_RS00300 PF07739 TipAS antibiotic-recognition domain TC41_RS00300 PF13411 MerR HTH family regulatory protein TC41_RS00305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TC41_RS00310 PF01384 Phosphate transporter family TC41_RS00315 PF01865 Protein of unknown function DUF47 TC41_RS00320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TC41_RS00320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TC41_RS00325 PF16901 C-terminal domain of alpha-glycerophosphate oxidase TC41_RS00325 PF01266 FAD dependent oxidoreductase TC41_RS00335 PF07729 FCD domain TC41_RS00335 PF00392 Bacterial regulatory proteins, gntR family TC41_RS00345 PF03648 Glycosyl hydrolase family 67 N-terminus TC41_RS00345 PF07477 Glycosyl hydrolase family 67 C-terminus TC41_RS00345 PF07488 Glycosyl hydrolase family 67 middle domain TC41_RS00355 PF00474 Sodium:solute symporter family TC41_RS00360 PF11755 Protein of unknown function (DUF3311) TC41_RS00365 PF00512 His Kinase A (phospho-acceptor) domain TC41_RS00365 PF00989 PAS fold TC41_RS00365 PF08447 PAS fold TC41_RS00365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS00380 PF00535 Glycosyl transferase family 2 TC41_RS00385 PF00625 Guanylate kinase TC41_RS00390 PF00512 His Kinase A (phospho-acceptor) domain TC41_RS00390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS00390 PF00989 PAS fold TC41_RS00420 PF13396 Phospholipase_D-nuclease N-terminal TC41_RS00420 PF13091 PLD-like domain TC41_RS00425 PF03009 Glycerophosphoryl diester phosphodiesterase family TC41_RS00435 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS00440 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS00445 PF02073 Thermophilic metalloprotease (M29) TC41_RS00455 PF01470 Pyroglutamyl peptidase TC41_RS00460 PF17932 Tetracyclin repressor-like, C-terminal domain TC41_RS00460 PF00440 Bacterial regulatory proteins, tetR family TC41_RS00470 PF13538 UvrD-like helicase C-terminal domain TC41_RS00475 PF00300 Histidine phosphatase superfamily (branch 1) TC41_RS00480 PF00342 Phosphoglucose isomerase TC41_RS00485 PF00480 ROK family TC41_RS00520 PF03176 MMPL family TC41_RS00530 PF03079 ARD/ARD' family TC41_RS00540 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain TC41_RS00540 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain TC41_RS00550 PF00596 Class II Aldolase and Adducin N-terminal domain TC41_RS00560 PF13537 Glutamine amidotransferase domain TC41_RS00560 PF00733 Asparagine synthase TC41_RS00570 PF14437 MafB19-like deaminase TC41_RS00580 PF00989 PAS fold TC41_RS00580 PF00512 His Kinase A (phospho-acceptor) domain TC41_RS00580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS00590 PF12169 DNA polymerase III subunits gamma and tau domain III TC41_RS00595 PF02575 YbaB/EbfC DNA-binding family TC41_RS00600 PF02132 RecR protein TC41_RS00600 PF13662 Toprim domain TC41_RS00605 PF01741 Large-conductance mechanosensitive channel, MscL TC41_RS00615 PF07690 Major Facilitator Superfamily TC41_RS00620 PF00596 Class II Aldolase and Adducin N-terminal domain TC41_RS00625 PF00581 Rhodanese-like domain TC41_RS00625 PF00753 Metallo-beta-lactamase superfamily TC41_RS00635 PF02743 Cache domain TC41_RS00635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TC41_RS00635 PF00672 HAMP domain TC41_RS00640 PF00072 Response regulator receiver domain TC41_RS00650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TC41_RS00655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS00655 PF02895 Signal transducing histidine kinase, homodimeric domain TC41_RS00655 PF01584 CheW-like domain TC41_RS00655 PF01627 Hpt domain TC41_RS00655 PF07194 P2 response regulator binding domain TC41_RS00660 PF01584 CheW-like domain TC41_RS00670 PF13817 IS66 C-terminal element TC41_RS00670 PF03050 Transposase IS66 family TC41_RS00670 PF13007 Transposase C of IS166 homeodomain TC41_RS00670 PF13005 zinc-finger binding domain of transposase IS66 TC41_RS00675 PF03050 Transposase IS66 family TC41_RS00675 PF13007 Transposase C of IS166 homeodomain TC41_RS00675 PF13005 zinc-finger binding domain of transposase IS66 TC41_RS00675 PF13817 IS66 C-terminal element TC41_RS00695 PF07441 SigmaK-factor processing regulatory protein BofA TC41_RS00700 PF01943 Polysaccharide biosynthesis protein TC41_RS00700 PF14667 Polysaccharide biosynthesis C-terminal domain TC41_RS00710 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain TC41_RS00710 PF01276 Orn/Lys/Arg decarboxylase, major domain TC41_RS00715 PF02223 Thymidylate kinase TC41_RS00720 PF06153 Cyclic-di-AMP receptor TC41_RS00725 PF09115 DNA polymerase III, delta subunit, C terminal TC41_RS00730 PF04468 PSP1 C-terminal conserved region TC41_RS00735 PF06156 Initiation control protein YabA TC41_RS00740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TC41_RS00745 PF18277 AbrB C-terminal domain TC41_RS00745 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TC41_RS00750 PF01588 Putative tRNA binding domain TC41_RS00750 PF09334 tRNA synthetases class I (M) TC41_RS00750 PF08264 Anticodon-binding domain of tRNA TC41_RS00755 PF01026 TatD related DNase TC41_RS00760 PF13331 Domain of unknown function (DUF4093) TC41_RS00760 PF13662 Toprim domain TC41_RS00765 PF00398 Ribosomal RNA adenine dimethylase TC41_RS00775 PF00268 Ribonucleotide reductase, small chain TC41_RS00810 PF03949 Malic enzyme, NAD binding domain TC41_RS00810 PF00390 Malic enzyme, N-terminal domain TC41_RS00820 PF13193 AMP-binding enzyme C-terminal domain TC41_RS00820 PF00501 AMP-binding enzyme TC41_RS00825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TC41_RS00825 PF02770 Acyl-CoA dehydrogenase, middle domain TC41_RS00825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TC41_RS00830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TC41_RS00830 PF02770 Acyl-CoA dehydrogenase, middle domain TC41_RS00830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TC41_RS00835 PF00378 Enoyl-CoA hydratase/isomerase TC41_RS00845 PF00108 Thiolase, N-terminal domain TC41_RS00845 PF02803 Thiolase, C-terminal domain TC41_RS00860 PF03109 ABC1 family TC41_RS00870 PF00171 Aldehyde dehydrogenase family TC41_RS00875 PF00465 Iron-containing alcohol dehydrogenase TC41_RS00885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TC41_RS00885 PF02770 Acyl-CoA dehydrogenase, middle domain TC41_RS00885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TC41_RS00900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TC41_RS00900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TC41_RS00900 PF02770 Acyl-CoA dehydrogenase, middle domain TC41_RS00905 PF00501 AMP-binding enzyme TC41_RS00905 PF13193 AMP-binding enzyme C-terminal domain TC41_RS00910 PF13452 N-terminal half of MaoC dehydratase TC41_RS00960 PF00005 ABC transporter TC41_RS00975 PF00872 Transposase, Mutator family TC41_RS01025 PF05582 YabG peptidase U57 TC41_RS01030 PF06257 Biofilm formation stimulator VEG TC41_RS01035 PF00269 Small, acid-soluble spore proteins, alpha/beta type TC41_RS01040 PF03575 Peptidase family S51 TC41_RS01050 PF08544 GHMP kinases C terminal TC41_RS01050 PF00288 GHMP kinases N terminal domain TC41_RS01055 PF00156 Phosphoribosyl transferase domain TC41_RS01055 PF09182 Bacterial purine repressor, N-terminal TC41_RS01060 PF01042 Endoribonuclease L-PSP TC41_RS01065 PF04026 SpoVG TC41_RS01070 PF00483 Nucleotidyl transferase TC41_RS01070 PF00132 Bacterial transferase hexapeptide (six repeats) TC41_RS01075 PF14572 Phosphoribosyl synthetase-associated domain TC41_RS01075 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TC41_RS01080 PF01195 Peptidyl-tRNA hydrolase TC41_RS01090 PF02559 CarD-like/TRCF domain TC41_RS01090 PF00270 DEAD/DEAH box helicase TC41_RS01090 PF00271 Helicase conserved C-terminal domain TC41_RS01090 PF03461 TRCF domain TC41_RS01090 PF17757 UvrB interaction domain TC41_RS01105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TC41_RS01105 PF03819 MazG nucleotide pyrophosphohydrolase domain TC41_RS01110 PF00216 Bacterial DNA-binding protein TC41_RS01115 PF01479 S4 domain TC41_RS01135 PF00575 S1 RNA binding domain TC41_RS01145 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TC41_RS01150 PF07228 Stage II sporulation protein E (SpoIIE) TC41_RS01155 PF00092 von Willebrand factor type A domain TC41_RS01165 PF09179 TilS substrate binding domain TC41_RS01165 PF01171 PP-loop family TC41_RS01165 PF11734 TilS substrate C-terminal domain TC41_RS01170 PF00156 Phosphoribosyl transferase domain TC41_RS01175 PF17862 AAA+ lid domain TC41_RS01175 PF06480 FtsH Extracellular TC41_RS01175 PF01434 Peptidase family M41 TC41_RS01175 PF00004 ATPase family associated with various cellular activities (AAA) TC41_RS01185 PF00072 Response regulator receiver domain TC41_RS01190 PF01430 Hsp33 protein TC41_RS01195 PF00809 Pterin binding enzyme TC41_RS01200 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TC41_RS01205 PF01381 Helix-turn-helix TC41_RS01210 PF03449 Transcription elongation factor, N-terminal TC41_RS01210 PF01272 Transcription elongation factor, GreA/GreB, C-term TC41_RS01215 PF00152 tRNA synthetases class II (D, K and N) TC41_RS01215 PF01336 OB-fold nucleic acid binding domain TC41_RS01240 PF05163 DinB family TC41_RS01245 PF02673 Bacitracin resistance protein BacA TC41_RS01250 PF07690 Major Facilitator Superfamily TC41_RS01255 PF00892 EamA-like transporter family TC41_RS01270 PF00155 Aminotransferase class I and II TC41_RS01275 PF00551 Formyl transferase TC41_RS01280 PF08659 KR domain TC41_RS01280 PF02801 Beta-ketoacyl synthase, C-terminal domain TC41_RS01280 PF00109 Beta-ketoacyl synthase, N-terminal domain TC41_RS01280 PF16197 Ketoacyl-synthetase C-terminal extension TC41_RS01280 PF00550 Phosphopantetheine attachment site TC41_RS01280 PF14765 Polyketide synthase dehydratase TC41_RS01280 PF00107 Zinc-binding dehydrogenase TC41_RS01280 PF08240 Alcohol dehydrogenase GroES-like domain TC41_RS01280 PF00698 Acyl transferase domain TC41_RS01285 PF02378 Phosphotransferase system, EIIC TC41_RS01285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TC41_RS01290 PF00874 PRD domain TC41_RS01290 PF05043 Mga helix-turn-helix domain TC41_RS01290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TC41_RS01290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TC41_RS01290 PF08279 HTH domain TC41_RS01295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TC41_RS01300 PF08125 Mannitol dehydrogenase C-terminal domain TC41_RS01300 PF01232 Mannitol dehydrogenase Rossmann domain TC41_RS01305 PF00381 PTS HPr component phosphorylation site TC41_RS01310 PF00391 PEP-utilising enzyme, mobile domain TC41_RS01310 PF02896 PEP-utilising enzyme, TIM barrel domain TC41_RS01310 PF05524 PEP-utilising enzyme, N-terminal TC41_RS01315 PF04542 Sigma-70 region 2 TC41_RS01315 PF04545 Sigma-70, region 4 TC41_RS01325 PF01425 Amidase TC41_RS01335 PF12323 Helix-turn-helix domain TC41_RS01335 PF01385 Probable transposase TC41_RS01335 PF07282 Putative transposase DNA-binding domain TC41_RS01340 PF01425 Amidase TC41_RS01355 PF00005 ABC transporter TC41_RS01360 PF00005 ABC transporter TC41_RS01365 PF02632 BioY family TC41_RS01370 PF00563 EAL domain TC41_RS01370 PF03707 Bacterial signalling protein N terminal repeat TC41_RS01370 PF00990 Diguanylate cyclase, GGDEF domain TC41_RS01380 PF00581 Rhodanese-like domain TC41_RS01390 PF07690 Major Facilitator Superfamily TC41_RS01405 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TC41_RS01410 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TC41_RS01425 PF01717 Cobalamin-independent synthase, Catalytic domain TC41_RS01430 PF07690 Major Facilitator Superfamily TC41_RS01435 PF03466 LysR substrate binding domain TC41_RS01435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TC41_RS01440 PF09286 Pro-kumamolisin, activation domain TC41_RS01440 PF00082 Subtilase family TC41_RS01445 PF00486 Transcriptional regulatory protein, C terminal TC41_RS01445 PF00072 Response regulator receiver domain TC41_RS01450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS01450 PF00512 His Kinase A (phospho-acceptor) domain TC41_RS01450 PF13493 Domain of unknown function (DUF4118) TC41_RS01450 PF02702 Osmosensitive K+ channel His kinase sensor domain TC41_RS01450 PF13492 GAF domain TC41_RS01455 PF03814 Potassium-transporting ATPase A subunit TC41_RS01465 PF02669 K+-transporting ATPase, c chain TC41_RS01470 PF02702 Osmosensitive K+ channel His kinase sensor domain TC41_RS01475 PF01522 Polysaccharide deacetylase TC41_RS01480 PF00248 Aldo/keto reductase family TC41_RS01490 PF07690 Major Facilitator Superfamily TC41_RS01495 PF01476 LysM domain TC41_RS01495 PF00704 Glycosyl hydrolases family 18 TC41_RS01500 PF13407 Periplasmic binding protein domain TC41_RS01505 PF00005 ABC transporter TC41_RS01510 PF02653 Branched-chain amino acid transport system / permease component TC41_RS01525 PF00682 HMGL-like TC41_RS01525 PF08502 LeuA allosteric (dimerisation) domain TC41_RS01530 PF00255 Glutathione peroxidase TC41_RS01635 PF09186 Domain of unknown function (DUF1949) TC41_RS01635 PF01205 Uncharacterized protein family UPF0029 TC41_RS01660 PF00535 Glycosyl transferase family 2 TC41_RS01665 PF01580 FtsK/SpoIIIE family TC41_RS01665 PF17854 FtsK alpha domain TC41_RS01665 PF09397 Ftsk gamma domain TC41_RS01685 PF02899 Phage integrase, N-terminal SAM-like domain TC41_RS01685 PF00589 Phage integrase family TC41_RS01715 PF17854 FtsK alpha domain TC41_RS01715 PF09397 Ftsk gamma domain TC41_RS01715 PF01580 FtsK/SpoIIIE family TC41_RS01750 PF13007 Transposase C of IS166 homeodomain TC41_RS01750 PF13817 IS66 C-terminal element TC41_RS01750 PF03050 Transposase IS66 family TC41_RS01750 PF13005 zinc-finger binding domain of transposase IS66 TC41_RS01765 PF07690 Major Facilitator Superfamily TC41_RS01780 PF17854 FtsK alpha domain TC41_RS01780 PF01580 FtsK/SpoIIIE family TC41_RS01780 PF09397 Ftsk gamma domain TC41_RS01800 PF12704 MacB-like periplasmic core domain TC41_RS01800 PF02687 FtsX-like permease family TC41_RS01800 PF00005 ABC transporter TC41_RS01805 PF00005 ABC transporter TC41_RS01805 PF12704 MacB-like periplasmic core domain TC41_RS01805 PF02687 FtsX-like permease family TC41_RS01815 PF00294 pfkB family carbohydrate kinase TC41_RS01820 PF00149 Calcineurin-like phosphoesterase TC41_RS01820 PF12320 Type 5 capsule protein repressor C-terminal domain TC41_RS01825 PF13476 AAA domain TC41_RS01830 PF07690 Major Facilitator Superfamily TC41_RS01835 PF00403 Heavy-metal-associated domain TC41_RS01840 PF00501 AMP-binding enzyme TC41_RS01840 PF13193 AMP-binding enzyme C-terminal domain TC41_RS01850 PF08281 Sigma-70, region 4 TC41_RS01850 PF04542 Sigma-70 region 2 TC41_RS01860 PF00174 Oxidoreductase molybdopterin binding domain TC41_RS01865 PF00902 Sec-independent protein translocase protein (TatC) TC41_RS01870 PF02416 mttA/Hcf106 family TC41_RS01875 PF08245 Mur ligase middle domain TC41_RS01875 PF01225 Mur ligase family, catalytic domain TC41_RS01875 PF02875 Mur ligase family, glutamate ligase domain TC41_RS01880 PF03717 Penicillin-binding Protein dimerisation domain TC41_RS01880 PF00905 Penicillin binding protein transpeptidase domain TC41_RS01900 PF02261 Aspartate decarboxylase TC41_RS01905 PF00742 Homoserine dehydrogenase TC41_RS01905 PF01842 ACT domain TC41_RS01905 PF03447 Homoserine dehydrogenase, NAD binding domain TC41_RS01915 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TC41_RS01915 PF00437 Type II/IV secretion system protein TC41_RS01930 PF08334 Type II secretion system (T2SS), protein G TC41_RS01930 PF07963 Prokaryotic N-terminal methylation motif TC41_RS01975 PF00437 Type II/IV secretion system protein TC41_RS01980 PF12323 Helix-turn-helix domain TC41_RS01980 PF07282 Putative transposase DNA-binding domain TC41_RS01980 PF01385 Probable transposase TC41_RS01985 PF00239 Resolvase, N terminal domain TC41_RS01990 PF06750 Bacterial Peptidase A24 N-terminal domain TC41_RS01990 PF01478 Type IV leader peptidase family TC41_RS01995 PF00270 DEAD/DEAH box helicase TC41_RS01995 PF00271 Helicase conserved C-terminal domain TC41_RS01995 PF09369 Domain of unknown function (DUF1998) TC41_RS02005 PF02954 Bacterial regulatory protein, Fis family TC41_RS02005 PF13426 PAS domain TC41_RS02005 PF00158 Sigma-54 interaction domain TC41_RS02010 PF00202 Aminotransferase class-III TC41_RS02015 PF00171 Aldehyde dehydrogenase family TC41_RS02040 PF00491 Arginase family TC41_RS02045 PF00202 Aminotransferase class-III TC41_RS02050 PF00171 Aldehyde dehydrogenase family TC41_RS02055 PF00158 Sigma-54 interaction domain TC41_RS02055 PF13426 PAS domain TC41_RS02055 PF02954 Bacterial regulatory protein, Fis family TC41_RS02060 PF00324 Amino acid permease TC41_RS02065 PF04963 Sigma-54 factor, core binding domain TC41_RS02065 PF00309 Sigma-54 factor, Activator interacting domain (AID) TC41_RS02065 PF04552 Sigma-54, DNA binding domain TC41_RS02070 PF00664 ABC transporter transmembrane region TC41_RS02070 PF00005 ABC transporter TC41_RS02075 PF00005 ABC transporter TC41_RS02075 PF00664 ABC transporter transmembrane region TC41_RS02095 PF01473 Putative cell wall binding repeat TC41_RS02095 PF17890 Peptidoglycan hydrolase LytB WW-like domain TC41_RS02095 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TC41_RS02095 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain TC41_RS02105 PF02311 AraC-like ligand binding domain TC41_RS02105 PF12833 Helix-turn-helix domain TC41_RS02115 PF00135 Carboxylesterase family TC41_RS02120 PF14310 Fibronectin type III-like domain TC41_RS02120 PF00933 Glycosyl hydrolase family 3 N terminal domain TC41_RS02120 PF01915 Glycosyl hydrolase family 3 C-terminal domain TC41_RS02125 PF01613 Flavin reductase like domain TC41_RS02130 PF07690 Major Facilitator Superfamily TC41_RS02135 PF00392 Bacterial regulatory proteins, gntR family TC41_RS02140 PF01557 Fumarylacetoacetate (FAA) hydrolase family TC41_RS02145 PF00171 Aldehyde dehydrogenase family TC41_RS02150 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal TC41_RS02150 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal TC41_RS02155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TC41_RS02160 PF00701 Dihydrodipicolinate synthetase family TC41_RS02165 PF03176 MMPL family TC41_RS02170 PF07301 Protein of unknown function (DUF1453) TC41_RS02175 PF00768 D-alanyl-D-alanine carboxypeptidase TC41_RS02180 PF00912 Transglycosylase TC41_RS02180 PF00905 Penicillin binding protein transpeptidase domain TC41_RS02185 PF00483 Nucleotidyl transferase TC41_RS02185 PF01050 Mannose-6-phosphate isomerase TC41_RS02200 PF01751 Toprim domain TC41_RS02205 PF00557 Metallopeptidase family M24 TC41_RS02225 PF01648 4'-phosphopantetheinyl transferase superfamily TC41_RS02230 PF01256 Carbohydrate kinase TC41_RS02230 PF03853 YjeF-related protein N-terminus TC41_RS02240 PF01168 Alanine racemase, N-terminal domain TC41_RS02240 PF00842 Alanine racemase, C-terminal domain TC41_RS02250 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system TC41_RS02255 PF05221 S-adenosyl-L-homocysteine hydrolase TC41_RS02255 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TC41_RS02260 PF07722 Peptidase C26 TC41_RS02280 PF07293 Protein of unknown function (DUF1450) TC41_RS02290 PF00586 AIR synthase related protein, N-terminal domain TC41_RS02290 PF02769 AIR synthase related protein, C-terminal domain TC41_RS02295 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TC41_RS02300 PF00814 Glycoprotease family TC41_RS02305 PF00583 Acetyltransferase (GNAT) family TC41_RS02310 PF00814 Glycoprotease family TC41_RS02315 PF12848 ABC transporter TC41_RS02315 PF16326 ABC transporter C-terminal domain TC41_RS02315 PF00005 ABC transporter TC41_RS02325 PF01812 5-formyltetrahydrofolate cyclo-ligase family TC41_RS02335 PF18146 Damage-inducible protein CinA KH domain TC41_RS02335 PF02464 Competence-damaged protein TC41_RS02335 PF00994 Probable molybdopterin binding domain TC41_RS02340 PF03205 Molybdopterin guanine dinucleotide synthesis protein B TC41_RS02345 PF00166 Chaperonin 10 Kd subunit TC41_RS02350 PF00118 TCP-1/cpn60 chaperonin family TC41_RS02375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS02375 PF07730 Histidine kinase TC41_RS02380 PF00072 Response regulator receiver domain TC41_RS02380 PF00196 Bacterial regulatory proteins, luxR family TC41_RS02390 PF17863 AAA lid domain TC41_RS02390 PF07726 ATPase family associated with various cellular activities (AAA) TC41_RS02400 PF11992 Domain of unknown function (DUF3488) TC41_RS02400 PF13559 Domain of unknown function (DUF4129) TC41_RS02400 PF01841 Transglutaminase-like superfamily TC41_RS02405 PF16123 Hydroxyacylglutathione hydrolase C-terminus TC41_RS02405 PF00753 Metallo-beta-lactamase superfamily TC41_RS02415 PF02540 NAD synthase TC41_RS02415 PF00958 GMP synthase C terminal domain TC41_RS02415 PF00117 Glutamine amidotransferase class-I TC41_RS02420 PF10397 Adenylosuccinate lyase C-terminus TC41_RS02420 PF00206 Lyase TC41_RS02425 PF01259 SAICAR synthetase TC41_RS02430 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase TC41_RS02440 PF02769 AIR synthase related protein, C-terminal domain TC41_RS02440 PF00586 AIR synthase related protein, N-terminal domain TC41_RS02440 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TC41_RS02445 PF00156 Phosphoribosyl transferase domain TC41_RS02450 PF00586 AIR synthase related protein, N-terminal domain TC41_RS02450 PF02769 AIR synthase related protein, C-terminal domain TC41_RS02455 PF02142 MGS-like domain TC41_RS02455 PF01808 AICARFT/IMPCHase bienzyme TC41_RS02460 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TC41_RS02460 PF02844 Phosphoribosylglycinamide synthetase, N domain TC41_RS02460 PF02843 Phosphoribosylglycinamide synthetase, C domain TC41_RS02490 PF00005 ABC transporter TC41_RS02495 PF18075 FtsX extracellular domain TC41_RS02495 PF02687 FtsX-like permease family TC41_RS02500 PF17820 PDZ domain TC41_RS02505 PF01618 MotA/TolQ/ExbB proton channel family TC41_RS02510 PF00691 OmpA family TC41_RS02510 PF13677 Membrane MotB of proton-channel complex MotA/MotB TC41_RS02515 PF00271 Helicase conserved C-terminal domain TC41_RS02515 PF04851 Type III restriction enzyme, res subunit TC41_RS02515 PF02151 UvrB/uvrC motif TC41_RS02515 PF12344 Ultra-violet resistance protein B TC41_RS02515 PF17757 UvrB interaction domain TC41_RS02520 PF00005 ABC transporter TC41_RS02520 PF17760 UvrA interaction domain TC41_RS02520 PF17755 UvrA DNA-binding domain TC41_RS02525 PF02603 HPr Serine kinase N terminus TC41_RS02525 PF07475 HPr Serine kinase C-terminal domain TC41_RS02530 PF03485 Arginyl tRNA synthetase N terminal domain TC41_RS02530 PF00750 tRNA synthetases class I (R) TC41_RS02530 PF05746 DALR anticodon binding domain TC41_RS02540 PF00293 NUDIX domain TC41_RS02540 PF00300 Histidine phosphatase superfamily (branch 1) TC41_RS02545 PF03668 P-loop ATPase protein family TC41_RS02550 PF01933 Uncharacterised protein family UPF0052 TC41_RS02555 PF10298 WhiA N-terminal LAGLIDADG-like domain TC41_RS02555 PF14527 WhiA LAGLIDADG-like domain TC41_RS02555 PF02650 WhiA C-terminal HTH domain TC41_RS02560 PF00381 PTS HPr component phosphorylation site TC41_RS02580 PF00730 HhH-GPD superfamily base excision DNA repair protein TC41_RS02580 PF00633 Helix-hairpin-helix motif TC41_RS02580 PF14815 NUDIX domain TC41_RS02585 PF01027 Inhibitor of apoptosis-promoting Bax1 TC41_RS02590 PF00133 tRNA synthetases class I (I, L, M and V) TC41_RS02590 PF13603 Leucyl-tRNA synthetase, Domain 2 TC41_RS02590 PF08264 Anticodon-binding domain of tRNA TC41_RS02590 PF09334 tRNA synthetases class I (M) TC41_RS02595 PF07729 FCD domain TC41_RS02595 PF00392 Bacterial regulatory proteins, gntR family TC41_RS02610 PF01594 AI-2E family transporter TC41_RS02625 PF00270 DEAD/DEAH box helicase TC41_RS02625 PF09369 Domain of unknown function (DUF1998) TC41_RS02625 PF00271 Helicase conserved C-terminal domain TC41_RS02635 PF06335 Protein of unknown function (DUF1054) TC41_RS02645 PF10576 Iron-sulfur binding domain of endonuclease III TC41_RS02645 PF00633 Helix-hairpin-helix motif TC41_RS02645 PF00730 HhH-GPD superfamily base excision DNA repair protein TC41_RS02655 PF03323 Bacillus/Clostridium GerA spore germination protein TC41_RS02665 PF00465 Iron-containing alcohol dehydrogenase TC41_RS02670 PF00171 Aldehyde dehydrogenase family TC41_RS02675 PF00171 Aldehyde dehydrogenase family TC41_RS02680 PF07690 Major Facilitator Superfamily TC41_RS02685 PF13426 PAS domain TC41_RS02685 PF00158 Sigma-54 interaction domain TC41_RS02685 PF02954 Bacterial regulatory protein, Fis family TC41_RS02690 PF13193 AMP-binding enzyme C-terminal domain TC41_RS02690 PF00501 AMP-binding enzyme TC41_RS02695 PF00075 RNase H TC41_RS02700 PF08331 Domain of unknown function (DUF1730) TC41_RS02705 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TC41_RS02705 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TC41_RS02715 PF00180 Isocitrate/isopropylmalate dehydrogenase TC41_RS02720 PF09339 IclR helix-turn-helix domain TC41_RS02720 PF01614 Bacterial transcriptional regulator TC41_RS02725 PF12671 Putative amidase domain TC41_RS02730 PF00588 SpoU rRNA Methylase family TC41_RS02735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TC41_RS02735 PF07992 Pyridine nucleotide-disulphide oxidoreductase TC41_RS02740 PF02817 e3 binding domain TC41_RS02740 PF00364 Biotin-requiring enzyme TC41_RS02740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TC41_RS02745 PF02779 Transketolase, pyrimidine binding domain TC41_RS02745 PF02780 Transketolase, C-terminal domain TC41_RS02750 PF00676 Dehydrogenase E1 component TC41_RS02760 PF00135 Carboxylesterase family TC41_RS02765 PF06798 PrkA serine protein kinase C-terminal domain TC41_RS02765 PF08298 PrkA AAA domain TC41_RS02770 PF04285 Protein of unknown function (DUF444) TC41_RS02775 PF04293 SpoVR like protein TC41_RS02795 PF03458 UPF0126 domain TC41_RS02805 PF00563 EAL domain TC41_RS02805 PF00672 HAMP domain TC41_RS02805 PF00990 Diguanylate cyclase, GGDEF domain TC41_RS02805 PF17154 Gammaproteobacterial periplasmic sensor domain TC41_RS02830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TC41_RS02835 PF00873 AcrB/AcrD/AcrF family TC41_RS02845 PF00005 ABC transporter TC41_RS02855 PF00005 ABC transporter TC41_RS02860 PF00392 Bacterial regulatory proteins, gntR family TC41_RS02865 PF00753 Metallo-beta-lactamase superfamily TC41_RS02865 PF12706 Beta-lactamase superfamily domain TC41_RS02870 PF07690 Major Facilitator Superfamily TC41_RS02875 PF01047 MarR family TC41_RS02880 PF02080 TrkA-C domain TC41_RS02880 PF03471 Transporter associated domain TC41_RS02880 PF00999 Sodium/hydrogen exchanger family TC41_RS02885 PF00005 ABC transporter TC41_RS02900 PF00072 Response regulator receiver domain TC41_RS02900 PF00196 Bacterial regulatory proteins, luxR family TC41_RS02915 PF02790 Cytochrome C oxidase subunit II, transmembrane domain TC41_RS02920 PF00115 Cytochrome C and Quinol oxidase polypeptide I TC41_RS02925 PF00510 Cytochrome c oxidase subunit III TC41_RS02930 PF03626 Prokaryotic Cytochrome C oxidase subunit IV TC41_RS02935 PF02628 Cytochrome oxidase assembly protein TC41_RS02940 PF07943 Penicillin-binding protein 5, C-terminal domain TC41_RS02940 PF00768 D-alanyl-D-alanine carboxypeptidase TC41_RS02945 PF01596 O-methyltransferase TC41_RS02960 PF00248 Aldo/keto reductase family TC41_RS02965 PF00465 Iron-containing alcohol dehydrogenase TC41_RS02985 PF00486 Transcriptional regulatory protein, C terminal TC41_RS02985 PF00072 Response regulator receiver domain TC41_RS02990 PF00672 HAMP domain TC41_RS02990 PF00989 PAS fold TC41_RS02990 PF00512 His Kinase A (phospho-acceptor) domain TC41_RS02990 PF18698 Histidine kinase sensor domain TC41_RS02990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS03005 PF07282 Putative transposase DNA-binding domain TC41_RS03005 PF01385 Probable transposase TC41_RS03005 PF12323 Helix-turn-helix domain TC41_RS03010 PF00239 Resolvase, N terminal domain TC41_RS03020 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase TC41_RS03030 PF00583 Acetyltransferase (GNAT) family TC41_RS03035 PF00580 UvrD/REP helicase N-terminal domain TC41_RS03035 PF13361 UvrD-like helicase C-terminal domain TC41_RS03040 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TC41_RS03040 PF12826 Helix-hairpin-helix motif TC41_RS03040 PF01653 NAD-dependent DNA ligase adenylation domain TC41_RS03040 PF00533 BRCA1 C Terminus (BRCT) domain TC41_RS03040 PF03120 NAD-dependent DNA ligase OB-fold domain TC41_RS03050 PF02686 Glu-tRNAGln amidotransferase C subunit TC41_RS03055 PF01425 Amidase TC41_RS03060 PF02637 GatB domain TC41_RS03060 PF02934 GatB/GatE catalytic domain TC41_RS03065 PF01938 TRAM domain TC41_RS03065 PF05958 tRNA (Uracil-5-)-methyltransferase TC41_RS03070 PF13026 Protein of unknown function (DUF3887) TC41_RS03070 PF12146 Serine aminopeptidase, S33 TC41_RS03085 PF07282 Putative transposase DNA-binding domain TC41_RS03085 PF01385 Probable transposase TC41_RS03085 PF12323 Helix-turn-helix domain TC41_RS03095 PF00486 Transcriptional regulatory protein, C terminal TC41_RS03095 PF00072 Response regulator receiver domain TC41_RS03105 PF02080 TrkA-C domain TC41_RS03105 PF00999 Sodium/hydrogen exchanger family TC41_RS03105 PF03471 Transporter associated domain TC41_RS03110 PF00210 Ferritin-like domain TC41_RS03115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TC41_RS03115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TC41_RS03120 PF00596 Class II Aldolase and Adducin N-terminal domain TC41_RS03130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TC41_RS03130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TC41_RS03140 PF02653 Branched-chain amino acid transport system / permease component TC41_RS03150 PF02952 L-fucose isomerase, C-terminal domain TC41_RS03150 PF07882 L-fucose isomerase, second N-terminal domain TC41_RS03150 PF07881 L-fucose isomerase, first N-terminal domain TC41_RS03165 PF00455 DeoR C terminal sensor domain TC41_RS03165 PF08220 DeoR-like helix-turn-helix domain TC41_RS03175 PF13183 4Fe-4S dicluster domain TC41_RS03175 PF11870 Domain of unknown function (DUF3390) TC41_RS03175 PF02589 LUD domain TC41_RS03180 PF02754 Cysteine-rich domain TC41_RS03190 PF04239 Protein of unknown function (DUF421) TC41_RS03195 PF03862 SpoVAC/SpoVAEB sporulation membrane protein TC41_RS03205 PF03862 SpoVAC/SpoVAEB sporulation membrane protein TC41_RS03210 PF01757 Acyltransferase family TC41_RS03235 PF13193 AMP-binding enzyme C-terminal domain TC41_RS03235 PF00501 AMP-binding enzyme TC41_RS03245 PF00083 Sugar (and other) transporter TC41_RS03250 PF04070 Domain of unknown function (DUF378) TC41_RS03255 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TC41_RS03255 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TC41_RS03260 PF05683 Fumarase C-terminus TC41_RS03260 PF05681 Fumarate hydratase (Fumerase) TC41_RS03270 PF01566 Natural resistance-associated macrophage protein TC41_RS03280 PF02885 Glycosyl transferase family, helical bundle domain TC41_RS03280 PF00591 Glycosyl transferase family, a/b domain TC41_RS03280 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TC41_RS03285 PF08439 Oligopeptidase F TC41_RS03285 PF01432 Peptidase family M3 TC41_RS03290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS03290 PF00512 His Kinase A (phospho-acceptor) domain TC41_RS03290 PF00989 PAS fold TC41_RS03290 PF13188 PAS domain TC41_RS03290 PF13426 PAS domain TC41_RS03300 PF00162 Phosphoglycerate kinase TC41_RS03305 PF00121 Triosephosphate isomerase TC41_RS03310 PF06415 BPG-independent PGAM N-terminus (iPGM_N) TC41_RS03310 PF01676 Metalloenzyme superfamily TC41_RS03315 PF03952 Enolase, N-terminal domain TC41_RS03315 PF00113 Enolase, C-terminal TIM barrel domain TC41_RS03320 PF03840 Preprotein translocase SecG subunit TC41_RS03325 PF07690 Major Facilitator Superfamily TC41_RS03330 PF17876 Cold shock domain TC41_RS03330 PF08206 Ribonuclease B OB domain TC41_RS03330 PF00773 RNB domain TC41_RS03330 PF00575 S1 RNA binding domain TC41_RS03335 PF01668 SmpB protein TC41_RS03340 PF00171 Aldehyde dehydrogenase family TC41_RS03345 PF10057 Uncharacterized conserved protein (DUF2294) TC41_RS03365 PF00534 Glycosyl transferases group 1 TC41_RS03385 PF01209 ubiE/COQ5 methyltransferase family TC41_RS03395 PF08267 Cobalamin-independent synthase, N-terminal domain TC41_RS03395 PF01717 Cobalamin-independent synthase, Catalytic domain TC41_RS03400 PF00296 Luciferase-like monooxygenase TC41_RS03405 PF01613 Flavin reductase like domain TC41_RS03420 PF09347 Domain of unknown function (DUF1989) TC41_RS03425 PF02785 Biotin carboxylase C-terminal domain TC41_RS03425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TC41_RS03425 PF00289 Biotin carboxylase, N-terminal domain TC41_RS03435 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS03440 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS03445 PF01547 Bacterial extracellular solute-binding protein TC41_RS03460 PF00672 HAMP domain TC41_RS03460 PF02743 Cache domain TC41_RS03460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TC41_RS03465 PF03069 Acetamidase/Formamidase family TC41_RS03480 PF10502 Signal peptidase, peptidase S26 TC41_RS03485 PF00248 Aldo/keto reductase family TC41_RS03490 PF00009 Elongation factor Tu GTP binding domain TC41_RS03490 PF03144 Elongation factor Tu domain 2 TC41_RS03490 PF16658 Class II release factor RF3, C-terminal domain TC41_RS03515 PF01370 NAD dependent epimerase/dehydratase family TC41_RS03520 PF16874 Glycosyl hydrolase family 36 C-terminal domain TC41_RS03520 PF16875 Glycosyl hydrolase family 36 N-terminal domain TC41_RS03525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TC41_RS03525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TC41_RS03530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TC41_RS03530 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TC41_RS03545 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain TC41_RS03545 PF06165 Glycosyltransferase family 36 TC41_RS03545 PF10091 Putative glucoamylase TC41_RS03550 PF00083 Sugar (and other) transporter TC41_RS03555 PF00285 Citrate synthase, C-terminal domain TC41_RS03560 PF03972 MmgE/PrpD family TC41_RS03570 PF00291 Pyridoxal-phosphate dependent enzyme TC41_RS03570 PF13291 ACT domain TC41_RS03580 PF17871 AAA lid domain TC41_RS03580 PF00004 ATPase family associated with various cellular activities (AAA) TC41_RS03580 PF10431 C-terminal, D2-small domain, of ClpB protein TC41_RS03580 PF07724 AAA domain (Cdc48 subfamily) TC41_RS03590 PF02441 Flavoprotein TC41_RS03595 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TC41_RS03605 PF07690 Major Facilitator Superfamily TC41_RS03610 PF00171 Aldehyde dehydrogenase family TC41_RS03615 PF00465 Iron-containing alcohol dehydrogenase TC41_RS03620 PF13193 AMP-binding enzyme C-terminal domain TC41_RS03620 PF00501 AMP-binding enzyme TC41_RS03625 PF10114 Sensory domain found in PocR TC41_RS03625 PF12833 Helix-turn-helix domain TC41_RS03635 PF00731 AIR carboxylase TC41_RS03640 PF01969 Protein of unknown function DUF111 TC41_RS03655 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TC41_RS03655 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TC41_RS03660 PF02464 Competence-damaged protein TC41_RS03660 PF00994 Probable molybdopterin binding domain TC41_RS03675 PF01118 Semialdehyde dehydrogenase, NAD binding domain TC41_RS03675 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation TC41_RS03680 PF07836 DmpG-like communication domain TC41_RS03680 PF00682 HMGL-like TC41_RS03685 PF03824 High-affinity nickel-transport protein TC41_RS03690 PF00440 Bacterial regulatory proteins, tetR family TC41_RS03690 PF17932 Tetracyclin repressor-like, C-terminal domain TC41_RS03695 PF05138 Phenylacetic acid catabolic protein TC41_RS03710 PF01883 Iron-sulfur cluster assembly protein TC41_RS03715 PF14535 AMP-binding enzyme C-terminal domain TC41_RS03715 PF00501 AMP-binding enzyme TC41_RS03730 PF00171 Aldehyde dehydrogenase family TC41_RS03735 PF00378 Enoyl-CoA hydratase/isomerase TC41_RS03740 PF00108 Thiolase, N-terminal domain TC41_RS03740 PF02803 Thiolase, C-terminal domain TC41_RS03745 PF02646 RmuC family TC41_RS03750 PF14168 YjzC-like protein TC41_RS03755 PF04172 LrgB-like family TC41_RS03760 PF03788 LrgA family TC41_RS03765 PF03466 LysR substrate binding domain TC41_RS03765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TC41_RS03775 PF04299 Putative FMN-binding domain TC41_RS03780 PF00155 Aminotransferase class I and II TC41_RS03785 PF00676 Dehydrogenase E1 component TC41_RS03790 PF02779 Transketolase, pyrimidine binding domain TC41_RS03790 PF02780 Transketolase, C-terminal domain TC41_RS03795 PF02817 e3 binding domain TC41_RS03795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TC41_RS03795 PF00364 Biotin-requiring enzyme TC41_RS03800 PF00378 Enoyl-CoA hydratase/isomerase TC41_RS03805 PF00892 EamA-like transporter family TC41_RS03820 PF08240 Alcohol dehydrogenase GroES-like domain TC41_RS03820 PF00107 Zinc-binding dehydrogenase TC41_RS03825 PF00664 ABC transporter transmembrane region TC41_RS03825 PF00005 ABC transporter TC41_RS03835 PF08240 Alcohol dehydrogenase GroES-like domain TC41_RS03835 PF00107 Zinc-binding dehydrogenase TC41_RS03840 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain TC41_RS03840 PF00326 Prolyl oligopeptidase family TC41_RS03845 PF00664 ABC transporter transmembrane region TC41_RS03845 PF00005 ABC transporter TC41_RS03850 PF00664 ABC transporter transmembrane region TC41_RS03850 PF00005 ABC transporter TC41_RS03865 PF10057 Uncharacterized conserved protein (DUF2294) TC41_RS03870 PF01226 Formate/nitrite transporter TC41_RS03875 PF00384 Molybdopterin oxidoreductase TC41_RS03875 PF01568 Molydopterin dinucleotide binding domain TC41_RS03875 PF12838 4Fe-4S dicluster domain TC41_RS03875 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TC41_RS03875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TC41_RS03885 PF07992 Pyridine nucleotide-disulphide oxidoreductase TC41_RS03895 PF00248 Aldo/keto reductase family TC41_RS03900 PF00239 Resolvase, N terminal domain TC41_RS03905 PF01385 Probable transposase TC41_RS03905 PF12323 Helix-turn-helix domain TC41_RS03905 PF07282 Putative transposase DNA-binding domain TC41_RS03915 PF00682 HMGL-like TC41_RS03915 PF08502 LeuA allosteric (dimerisation) domain TC41_RS03920 PF07690 Major Facilitator Superfamily TC41_RS03930 PF01385 Probable transposase TC41_RS03930 PF07282 Putative transposase DNA-binding domain TC41_RS03930 PF12323 Helix-turn-helix domain TC41_RS03935 PF00239 Resolvase, N terminal domain TC41_RS03965 PF13673 Acetyltransferase (GNAT) domain TC41_RS03965 PF00117 Glutamine amidotransferase class-I TC41_RS03965 PF03352 Methyladenine glycosylase TC41_RS03965 PF13302 Acetyltransferase (GNAT) domain TC41_RS03965 PF00958 GMP synthase C terminal domain TC41_RS03970 PF00085 Thioredoxin TC41_RS03975 PF01625 Peptide methionine sulfoxide reductase TC41_RS03980 PF00005 ABC transporter TC41_RS03985 PF04264 YceI-like domain TC41_RS03990 PF01638 HxlR-like helix-turn-helix TC41_RS03995 PF01979 Amidohydrolase family TC41_RS04000 PF01747 ATP-sulfurylase TC41_RS04000 PF14306 PUA-like domain TC41_RS04005 PF01047 MarR family TC41_RS04010 PF09844 Uncharacterized conserved protein (COG2071) TC41_RS04015 PF00749 tRNA synthetases class I (E and Q), catalytic domain TC41_RS04020 PF00171 Aldehyde dehydrogenase family TC41_RS04025 PF00248 Aldo/keto reductase family TC41_RS04030 PF02390 Putative methyltransferase TC41_RS04035 PF00857 Isochorismatase family TC41_RS04050 PF07690 Major Facilitator Superfamily TC41_RS04055 PF13538 UvrD-like helicase C-terminal domain TC41_RS04060 PF12833 Helix-turn-helix domain TC41_RS04065 PF07690 Major Facilitator Superfamily TC41_RS04070 PF13673 Acetyltransferase (GNAT) domain TC41_RS04080 PF08830 Protein of unknown function (DUF1806) TC41_RS04085 PF02585 GlcNAc-PI de-N-acetylase TC41_RS04090 PF01451 Low molecular weight phosphotyrosine protein phosphatase TC41_RS04100 PF00085 Thioredoxin TC41_RS04105 PF13607 Succinyl-CoA ligase like flavodoxin domain TC41_RS04105 PF00583 Acetyltransferase (GNAT) family TC41_RS04105 PF13380 CoA binding domain TC41_RS04110 PF07992 Pyridine nucleotide-disulphide oxidoreductase TC41_RS04120 PF02378 Phosphotransferase system, EIIC TC41_RS04120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TC41_RS04120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TC41_RS04125 PF08220 DeoR-like helix-turn-helix domain TC41_RS04125 PF00455 DeoR C terminal sensor domain TC41_RS04130 PF00294 pfkB family carbohydrate kinase TC41_RS04135 PF02378 Phosphotransferase system, EIIC TC41_RS04135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TC41_RS04145 PF01425 Amidase TC41_RS04150 PF00892 EamA-like transporter family TC41_RS04155 PF00326 Prolyl oligopeptidase family TC41_RS04160 PF08818 Domain of unknown function (DU1801) TC41_RS04165 PF01022 Bacterial regulatory protein, arsR family TC41_RS04180 PF01053 Cys/Met metabolism PLP-dependent enzyme TC41_RS04190 PF00676 Dehydrogenase E1 component TC41_RS04195 PF02779 Transketolase, pyrimidine binding domain TC41_RS04195 PF02780 Transketolase, C-terminal domain TC41_RS04200 PF00501 AMP-binding enzyme TC41_RS04200 PF13193 AMP-binding enzyme C-terminal domain TC41_RS04205 PF01070 FMN-dependent dehydrogenase TC41_RS04210 PF02545 Maf-like protein TC41_RS04230 PF00465 Iron-containing alcohol dehydrogenase TC41_RS04235 PF00356 Bacterial regulatory proteins, lacI family TC41_RS04250 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS04255 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS04260 PF00330 Aconitase family (aconitate hydratase) TC41_RS04260 PF00694 Aconitase C-terminal domain TC41_RS04265 PF00953 Glycosyl transferase family 4 TC41_RS04270 PF01040 UbiA prenyltransferase family TC41_RS04275 PF00107 Zinc-binding dehydrogenase TC41_RS04275 PF08240 Alcohol dehydrogenase GroES-like domain TC41_RS04280 PF00107 Zinc-binding dehydrogenase TC41_RS04280 PF08240 Alcohol dehydrogenase GroES-like domain TC41_RS04285 PF04551 GcpE protein TC41_RS04290 PF01476 LysM domain TC41_RS04290 PF04972 BON domain TC41_RS04295 PF13393 Histidyl-tRNA synthetase TC41_RS04300 PF01634 ATP phosphoribosyltransferase TC41_RS04305 PF00815 Histidinol dehydrogenase TC41_RS04310 PF00475 Imidazoleglycerol-phosphate dehydratase TC41_RS04315 PF00117 Glutamine amidotransferase class-I TC41_RS04320 PF00977 Histidine biosynthesis protein TC41_RS04325 PF00977 Histidine biosynthesis protein TC41_RS04330 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TC41_RS04330 PF01502 Phosphoribosyl-AMP cyclohydrolase TC41_RS04350 PF08240 Alcohol dehydrogenase GroES-like domain TC41_RS04350 PF00107 Zinc-binding dehydrogenase TC41_RS04355 PF13520 Amino acid permease TC41_RS04360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TC41_RS04360 PF01872 RibD C-terminal domain TC41_RS04365 PF00677 Lumazine binding domain TC41_RS04370 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TC41_RS04370 PF00925 GTP cyclohydrolase II TC41_RS04375 PF00885 6,7-dimethyl-8-ribityllumazine synthase TC41_RS04385 PF09819 ABC-type cobalt transport system, permease component TC41_RS04390 PF00005 ABC transporter TC41_RS04395 PF00456 Transketolase, thiamine diphosphate binding domain TC41_RS04395 PF02780 Transketolase, C-terminal domain TC41_RS04395 PF02779 Transketolase, pyrimidine binding domain TC41_RS04425 PF00106 short chain dehydrogenase TC41_RS04430 PF00581 Rhodanese-like domain TC41_RS04440 PF02585 GlcNAc-PI de-N-acetylase TC41_RS04445 PF02770 Acyl-CoA dehydrogenase, middle domain TC41_RS04445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TC41_RS04445 PF08028 Acyl-CoA dehydrogenase, C-terminal domain TC41_RS04455 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TC41_RS04465 PF13361 UvrD-like helicase C-terminal domain TC41_RS04465 PF00580 UvrD/REP helicase N-terminal domain TC41_RS04485 PF00849 RNA pseudouridylate synthase TC41_RS04485 PF01479 S4 domain TC41_RS04490 PF03631 Virulence factor BrkB TC41_RS04495 PF02152 Dihydroneopterin aldolase TC41_RS04500 PF10776 Protein of unknown function (DUF2600) TC41_RS04510 PF01926 50S ribosome-binding GTPase TC41_RS04510 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TC41_RS04515 PF00350 Dynamin family TC41_RS04525 PF04542 Sigma-70 region 2 TC41_RS04525 PF04545 Sigma-70, region 4 TC41_RS04530 PF09335 SNARE associated Golgi protein TC41_RS04540 PF04542 Sigma-70 region 2 TC41_RS04540 PF04545 Sigma-70, region 4 TC41_RS04555 PF01227 GTP cyclohydrolase I TC41_RS04560 PF01979 Amidohydrolase family TC41_RS04565 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TC41_RS04565 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TC41_RS04575 PF01180 Dihydroorotate dehydrogenase TC41_RS04580 PF08281 Sigma-70, region 4 TC41_RS04580 PF04542 Sigma-70 region 2 TC41_RS04590 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TC41_RS04590 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TC41_RS04595 PF01883 Iron-sulfur cluster assembly protein TC41_RS04600 PF00005 ABC transporter TC41_RS04605 PF01458 Uncharacterized protein family (UPF0051) TC41_RS04610 PF00266 Aminotransferase class-V TC41_RS04615 PF01592 NifU-like N terminal domain TC41_RS04620 PF01458 Uncharacterized protein family (UPF0051) TC41_RS04625 PF00355 Rieske [2Fe-2S] domain TC41_RS04630 PF02082 Transcriptional regulator TC41_RS04645 PF00459 Inositol monophosphatase family TC41_RS04650 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TC41_RS04650 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain TC41_RS04650 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TC41_RS04655 PF02401 LytB protein TC41_RS04670 PF13520 Amino acid permease TC41_RS04675 PF01321 Creatinase/Prolidase N-terminal domain TC41_RS04675 PF00557 Metallopeptidase family M24 TC41_RS04690 PF14034 Sporulation protein YtrH TC41_RS04695 PF00176 SNF2 family N-terminal domain TC41_RS04695 PF00271 Helicase conserved C-terminal domain TC41_RS04695 PF12419 SNF2 Helicase protein TC41_RS04715 PF02811 PHP domain TC41_RS04715 PF14579 Helix-hairpin-helix motif TC41_RS04715 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TC41_RS04715 PF07733 Bacterial DNA polymerase III alpha NTPase domain TC41_RS04725 PF01569 PAP2 superfamily TC41_RS04740 PF01230 HIT domain TC41_RS04745 PF01063 Amino-transferase class IV TC41_RS04755 PF01261 Xylose isomerase-like TIM barrel TC41_RS04760 PF07690 Major Facilitator Superfamily TC41_RS04765 PF05193 Peptidase M16 inactive domain TC41_RS04770 PF05193 Peptidase M16 inactive domain TC41_RS04770 PF00675 Insulinase (Peptidase family M16) TC41_RS04775 PF12706 Beta-lactamase superfamily domain TC41_RS04780 PF00291 Pyridoxal-phosphate dependent enzyme TC41_RS04785 PF08544 GHMP kinases C terminal TC41_RS04785 PF00288 GHMP kinases N terminal domain TC41_RS04790 PF03061 Thioesterase superfamily TC41_RS04800 PF00665 Integrase core domain TC41_RS04800 PF13333 Integrase core domain TC41_RS04800 PF13276 HTH-like domain TC41_RS04810 PF13276 HTH-like domain TC41_RS04810 PF13333 Integrase core domain TC41_RS04810 PF00665 Integrase core domain TC41_RS04815 PF13007 Transposase C of IS166 homeodomain TC41_RS04815 PF13817 IS66 C-terminal element TC41_RS04815 PF03050 Transposase IS66 family TC41_RS04815 PF13005 zinc-finger binding domain of transposase IS66 TC41_RS04840 PF00665 Integrase core domain TC41_RS04850 PF01695 IstB-like ATP binding protein TC41_RS04865 PF07685 CobB/CobQ-like glutamine amidotransferase domain TC41_RS04870 PF08353 Domain of unknown function (DUF1727) TC41_RS04870 PF08245 Mur ligase middle domain TC41_RS04880 PF02834 LigT like Phosphoesterase TC41_RS04890 PF01098 Cell cycle protein TC41_RS04900 PF03009 Glycerophosphoryl diester phosphodiesterase family TC41_RS04905 PF01098 Cell cycle protein TC41_RS04910 PF00155 Aminotransferase class I and II TC41_RS04925 PF08741 YwhD family TC41_RS04930 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain TC41_RS04930 PF01276 Orn/Lys/Arg decarboxylase, major domain TC41_RS04935 PF00578 AhpC/TSA family TC41_RS04940 PF01521 Iron-sulphur cluster biosynthesis TC41_RS04945 PF01966 HD domain TC41_RS04950 PF09335 SNARE associated Golgi protein TC41_RS04955 PF08827 Domain of unknown function (DUF1805) TC41_RS04960 PF05343 M42 glutamyl aminopeptidase TC41_RS04965 PF02681 Divergent PAP2 family TC41_RS04970 PF00293 NUDIX domain TC41_RS04980 PF06725 3D domain TC41_RS04980 PF01476 LysM domain TC41_RS05015 PF07859 alpha/beta hydrolase fold TC41_RS05025 PF00171 Aldehyde dehydrogenase family TC41_RS05030 PF08141 Small acid-soluble spore protein H family TC41_RS05035 PF03060 Nitronate monooxygenase TC41_RS05040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TC41_RS05040 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TC41_RS05080 PF13333 Integrase core domain TC41_RS05080 PF00665 Integrase core domain TC41_RS05080 PF13276 HTH-like domain TC41_RS05085 PF13333 Integrase core domain TC41_RS05085 PF00665 Integrase core domain TC41_RS05085 PF13276 HTH-like domain TC41_RS05095 PF13416 Bacterial extracellular solute-binding protein TC41_RS05100 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS05105 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS05110 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TC41_RS05110 PF02929 Beta galactosidase small chain TC41_RS05110 PF16353 Domain of unknown function(DUF4981) TC41_RS05110 PF02837 Glycosyl hydrolases family 2, sugar binding domain TC41_RS05110 PF00703 Glycosyl hydrolases family 2 TC41_RS05125 PF13007 Transposase C of IS166 homeodomain TC41_RS05125 PF13817 IS66 C-terminal element TC41_RS05125 PF03050 Transposase IS66 family TC41_RS05125 PF13005 zinc-finger binding domain of transposase IS66 TC41_RS05130 PF13333 Integrase core domain TC41_RS05130 PF00665 Integrase core domain TC41_RS05130 PF13276 HTH-like domain TC41_RS05140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TC41_RS05140 PF02770 Acyl-CoA dehydrogenase, middle domain TC41_RS05140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TC41_RS05145 PF00378 Enoyl-CoA hydratase/isomerase TC41_RS05155 PF13193 AMP-binding enzyme C-terminal domain TC41_RS05155 PF00501 AMP-binding enzyme TC41_RS05160 PF13193 AMP-binding enzyme C-terminal domain TC41_RS05160 PF00501 AMP-binding enzyme TC41_RS05170 PF00356 Bacterial regulatory proteins, lacI family TC41_RS05185 PF00117 Glutamine amidotransferase class-I TC41_RS05190 PF04715 Anthranilate synthase component I, N terminal region TC41_RS05190 PF00425 chorismate binding enzyme TC41_RS05205 PF01118 Semialdehyde dehydrogenase, NAD binding domain TC41_RS05205 PF02774 Semialdehyde dehydrogenase, dimerisation domain TC41_RS05210 PF00696 Amino acid kinase family TC41_RS05215 PF00202 Aminotransferase class-III TC41_RS05220 PF00206 Lyase TC41_RS05220 PF00583 Acetyltransferase (GNAT) family TC41_RS05220 PF14698 Argininosuccinate lyase C-terminal TC41_RS05230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TC41_RS05230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TC41_RS05235 PF00764 Arginosuccinate synthase TC41_RS05240 PF00206 Lyase TC41_RS05240 PF14698 Argininosuccinate lyase C-terminal TC41_RS05250 PF00696 Amino acid kinase family TC41_RS05250 PF13840 ACT domain TC41_RS05250 PF01842 ACT domain TC41_RS05255 PF01842 ACT domain TC41_RS05255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TC41_RS05255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TC41_RS05260 PF00266 Aminotransferase class-V TC41_RS05305 PF00176 SNF2 family N-terminal domain TC41_RS05305 PF00271 Helicase conserved C-terminal domain TC41_RS05335 PF02796 Helix-turn-helix domain of resolvase TC41_RS05335 PF00665 Integrase core domain TC41_RS05355 PF00392 Bacterial regulatory proteins, gntR family TC41_RS05360 PF00005 ABC transporter TC41_RS05380 PF00581 Rhodanese-like domain TC41_RS05385 PF00085 Thioredoxin TC41_RS05400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TC41_RS05400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TC41_RS05400 PF00378 Enoyl-CoA hydratase/isomerase TC41_RS05410 PF00392 Bacterial regulatory proteins, gntR family TC41_RS05410 PF07729 FCD domain TC41_RS05415 PF01184 GPR1/FUN34/yaaH family TC41_RS05420 PF16177 Acetyl-coenzyme A synthetase N-terminus TC41_RS05420 PF00501 AMP-binding enzyme TC41_RS05420 PF13193 AMP-binding enzyme C-terminal domain TC41_RS05425 PF06949 Protein of unknown function (DUF1292) TC41_RS05450 PF00574 Clp protease TC41_RS05455 PF00266 Aminotransferase class-V TC41_RS05460 PF02926 THUMP domain TC41_RS05460 PF02568 Thiamine biosynthesis protein (ThiI) TC41_RS05475 PF05504 Spore germination B3/ GerAC like, C-terminal TC41_RS05485 PF10079 Bacillithiol biosynthesis BshC TC41_RS05490 PF02381 MraZ protein, putative antitoxin-like TC41_RS05495 PF01795 MraW methylase family TC41_RS05505 PF00905 Penicillin binding protein transpeptidase domain TC41_RS05505 PF03717 Penicillin-binding Protein dimerisation domain TC41_RS05505 PF03793 PASTA domain TC41_RS05510 PF03717 Penicillin-binding Protein dimerisation domain TC41_RS05510 PF00905 Penicillin binding protein transpeptidase domain TC41_RS05510 PF03793 PASTA domain TC41_RS05515 PF08245 Mur ligase middle domain TC41_RS05515 PF01225 Mur ligase family, catalytic domain TC41_RS05515 PF02875 Mur ligase family, glutamate ligase domain TC41_RS05520 PF00953 Glycosyl transferase family 4 TC41_RS05525 PF08245 Mur ligase middle domain TC41_RS05525 PF02875 Mur ligase family, glutamate ligase domain TC41_RS05530 PF01098 Cell cycle protein TC41_RS05535 PF04101 Glycosyltransferase family 28 C-terminal domain TC41_RS05535 PF03033 Glycosyltransferase family 28 N-terminal domain TC41_RS05540 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TC41_RS05540 PF01565 FAD binding domain TC41_RS05545 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TC41_RS05555 PF07508 Recombinase TC41_RS05555 PF00239 Resolvase, N terminal domain TC41_RS05555 PF13408 Recombinase zinc beta ribbon domain TC41_RS05560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TC41_RS05580 PF06947 Protein of unknown function (DUF1290) TC41_RS05585 PF02491 SHS2 domain inserted in FTSA TC41_RS05590 PF12327 FtsZ family, C-terminal domain TC41_RS05590 PF00091 Tubulin/FtsZ family, GTPase domain TC41_RS05600 PF13276 HTH-like domain TC41_RS05600 PF13333 Integrase core domain TC41_RS05600 PF00665 Integrase core domain TC41_RS05610 PF03419 Sporulation factor SpoIIGA TC41_RS05615 PF04542 Sigma-70 region 2 TC41_RS05615 PF04545 Sigma-70, region 4 TC41_RS05620 PF04542 Sigma-70 region 2 TC41_RS05620 PF04539 Sigma-70 region 3 TC41_RS05620 PF04545 Sigma-70, region 4 TC41_RS05625 PF05239 PRC-barrel domain TC41_RS05630 PF02578 Multi-copper polyphenol oxidoreductase laccase TC41_RS05635 PF01168 Alanine racemase, N-terminal domain TC41_RS05650 PF05103 DivIVA protein TC41_RS05670 PF01252 Signal peptidase (SPase) II TC41_RS05675 PF01479 S4 domain TC41_RS05675 PF00849 RNA pseudouridylate synthase TC41_RS05680 PF00156 Phosphoribosyl transferase domain TC41_RS05685 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TC41_RS05685 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TC41_RS05690 PF01979 Amidohydrolase family TC41_RS05695 PF00117 Glutamine amidotransferase class-I TC41_RS05695 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TC41_RS05700 PF02142 MGS-like domain TC41_RS05700 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TC41_RS05700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TC41_RS05705 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TC41_RS05710 PF00156 Phosphoribosyl transferase domain TC41_RS05715 PF01266 FAD dependent oxidoreductase TC41_RS05715 PF00355 Rieske [2Fe-2S] domain TC41_RS05725 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TC41_RS05725 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TC41_RS05735 PF00690 Cation transporter/ATPase, N-terminus TC41_RS05735 PF00689 Cation transporting ATPase, C-terminus TC41_RS05740 PF03755 YicC-like family, N-terminal region TC41_RS05740 PF08340 Domain of unknown function (DUF1732) TC41_RS05745 PF01192 RNA polymerase Rpb6 TC41_RS05750 PF02441 Flavoprotein TC41_RS05750 PF04127 DNA / pantothenate metabolism flavoprotein TC41_RS05755 PF04851 Type III restriction enzyme, res subunit TC41_RS05755 PF00271 Helicase conserved C-terminal domain TC41_RS05755 PF18074 Primosomal protein N C-terminal domain TC41_RS05755 PF17764 3′ DNA-binding domain (3′BD) TC41_RS05755 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TC41_RS05760 PF01327 Polypeptide deformylase TC41_RS05765 PF00551 Formyl transferase TC41_RS05765 PF02911 Formyl transferase, C-terminal domain TC41_RS05770 PF01029 NusB family TC41_RS05770 PF01189 16S rRNA methyltransferase RsmB/F TC41_RS05775 PF04055 Radical SAM superfamily TC41_RS05785 PF03793 PASTA domain TC41_RS05785 PF00069 Protein kinase domain TC41_RS05790 PF03193 RsgA GTPase TC41_RS05790 PF16745 RsgA N-terminal domain TC41_RS05795 PF00834 Ribulose-phosphate 3 epimerase family TC41_RS05800 PF08183 Stage V sporulation protein family TC41_RS05805 PF00830 Ribosomal L28 family TC41_RS05810 PF00270 DEAD/DEAH box helicase TC41_RS05810 PF00271 Helicase conserved C-terminal domain TC41_RS05810 PF17191 RecG wedge domain TC41_RS05815 PF00269 Small, acid-soluble spore proteins, alpha/beta type TC41_RS05820 PF02666 Phosphatidylserine decarboxylase TC41_RS05825 PF16363 GDP-mannose 4,6 dehydratase TC41_RS05830 PF00534 Glycosyl transferases group 1 TC41_RS05830 PF13439 Glycosyltransferase Family 4 TC41_RS05835 PF01425 Amidase TC41_RS05845 PF01467 Cytidylyltransferase-like TC41_RS05850 PF01734 Patatin-like phospholipase TC41_RS05860 PF03061 Thioesterase superfamily TC41_RS05865 PF02504 Fatty acid synthesis protein TC41_RS05870 PF00698 Acyl transferase domain TC41_RS05880 PF00550 Phosphopantetheine attachment site TC41_RS05885 PF00109 Beta-ketoacyl synthase, N-terminal domain TC41_RS05885 PF02801 Beta-ketoacyl synthase, C-terminal domain TC41_RS05890 PF14622 Ribonuclease-III-like TC41_RS05890 PF00035 Double-stranded RNA binding motif TC41_RS05895 PF02463 RecF/RecN/SMC N terminal domain TC41_RS05895 PF06470 SMC proteins Flexible Hinge Domain TC41_RS05900 PF00448 SRP54-type protein, GTPase domain TC41_RS05900 PF02881 SRP54-type protein, helical bundle domain TC41_RS05905 PF04297 Putative helix-turn-helix protein, YlxM / p13 like TC41_RS05910 PF02881 SRP54-type protein, helical bundle domain TC41_RS05910 PF02978 Signal peptide binding domain TC41_RS05910 PF00448 SRP54-type protein, GTPase domain TC41_RS05915 PF00886 Ribosomal protein S16 TC41_RS05930 PF01782 RimM N-terminal domain TC41_RS05930 PF05239 PRC-barrel domain TC41_RS05935 PF01746 tRNA (Guanine-1)-methyltransferase TC41_RS05955 PF04715 Anthranilate synthase component I, N terminal region TC41_RS05955 PF00425 chorismate binding enzyme TC41_RS05960 PF00849 RNA pseudouridylate synthase TC41_RS05960 PF01479 S4 domain TC41_RS05970 PF01551 Peptidase family M23 TC41_RS05975 PF03061 Thioesterase superfamily TC41_RS05995 PF01245 Ribosomal protein L19 TC41_RS06000 PF01926 50S ribosome-binding GTPase TC41_RS06005 PF01351 Ribonuclease HII TC41_RS06015 PF01312 FlhB HrpN YscU SpaS Family TC41_RS06020 PF01522 Polysaccharide deacetylase TC41_RS06025 PF13335 Magnesium chelatase, subunit ChlI C-terminal TC41_RS06025 PF01078 Magnesium chelatase, subunit ChlI TC41_RS06035 PF08442 ATP-grasp domain TC41_RS06035 PF00549 CoA-ligase TC41_RS06040 PF02629 CoA binding domain TC41_RS06040 PF00549 CoA-ligase TC41_RS06045 PF17782 DprA winged helix domain TC41_RS06045 PF02481 DNA recombination-mediator protein A TC41_RS06065 PF01131 DNA topoisomerase TC41_RS06065 PF01751 Toprim domain TC41_RS06065 PF01396 Topoisomerase DNA binding C4 zinc finger TC41_RS06070 PF01134 Glucose inhibited division protein A TC41_RS06075 PF02899 Phage integrase, N-terminal SAM-like domain TC41_RS06075 PF00589 Phage integrase family TC41_RS06085 PF07724 AAA domain (Cdc48 subfamily) TC41_RS06085 PF10431 C-terminal, D2-small domain, of ClpB protein TC41_RS06085 PF00004 ATPase family associated with various cellular activities (AAA) TC41_RS06090 PF00460 Flagella basal body rod protein TC41_RS06095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TC41_RS06095 PF00460 Flagella basal body rod protein TC41_RS06100 PF02049 Flagellar hook-basal body complex protein FliE TC41_RS06105 PF01514 Secretory protein of YscJ/FliF family TC41_RS06105 PF08345 Flagellar M-ring protein C-terminal TC41_RS06110 PF14842 FliG N-terminal domain TC41_RS06110 PF14841 FliG middle domain TC41_RS06110 PF01706 FliG C-terminal domain TC41_RS06120 PF02874 ATP synthase alpha/beta family, beta-barrel domain TC41_RS06120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TC41_RS06120 PF18269 T3SS EscN ATPase C-terminal domain TC41_RS06155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TC41_RS06155 PF07559 Flagellar basal body protein FlaE TC41_RS06155 PF00460 Flagella basal body rod protein TC41_RS06170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TC41_RS06170 PF02154 Flagellar motor switch protein FliM TC41_RS06175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TC41_RS06175 PF04509 CheC-like family TC41_RS06180 PF00072 Response regulator receiver domain TC41_RS06185 PF04347 Flagellar biosynthesis protein, FliO TC41_RS06190 PF00813 FliP family TC41_RS06195 PF01313 Bacterial export proteins, family 3 TC41_RS06205 PF01312 FlhB HrpN YscU SpaS Family TC41_RS06210 PF00771 FHIPEP family TC41_RS06215 PF00448 SRP54-type protein, GTPase domain TC41_RS06225 PF00072 Response regulator receiver domain TC41_RS06225 PF01339 CheB methylesterase TC41_RS06230 PF01627 Hpt domain TC41_RS06230 PF07194 P2 response regulator binding domain TC41_RS06230 PF01584 CheW-like domain TC41_RS06230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS06230 PF02895 Signal transducing histidine kinase, homodimeric domain TC41_RS06235 PF01584 CheW-like domain TC41_RS06240 PF04509 CheC-like family TC41_RS06245 PF03975 CheD chemotactic sensory transduction TC41_RS06265 PF00318 Ribosomal protein S2 TC41_RS06270 PF00889 Elongation factor TS TC41_RS06275 PF00696 Amino acid kinase family TC41_RS06280 PF01765 Ribosome recycling factor TC41_RS06285 PF01255 Putative undecaprenyl diphosphate synthase TC41_RS06295 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TC41_RS06295 PF13288 DXP reductoisomerase C-terminal domain TC41_RS06295 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TC41_RS06305 PF00929 Exonuclease TC41_RS06305 PF14480 DNA polymerase III polC-type N-terminus I TC41_RS06305 PF11490 DNA polymerase III polC-type N-terminus II TC41_RS06305 PF07733 Bacterial DNA polymerase III alpha NTPase domain TC41_RS06305 PF14579 Helix-hairpin-helix motif TC41_RS06305 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TC41_RS06305 PF02811 PHP domain TC41_RS06310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TC41_RS06315 PF00800 Prephenate dehydratase TC41_RS06320 PF03144 Elongation factor Tu domain 2 TC41_RS06320 PF00009 Elongation factor Tu GTP binding domain TC41_RS06320 PF00679 Elongation factor G C-terminus TC41_RS06320 PF14492 Elongation Factor G, domain II TC41_RS06325 PF17384 RimP C-terminal SH3 domain TC41_RS06325 PF02576 RimP N-terminal domain TC41_RS06330 PF13184 NusA-like KH domain TC41_RS06330 PF08529 NusA N-terminal domain TC41_RS06330 PF00575 S1 RNA binding domain TC41_RS06335 PF04296 Protein of unknown function (DUF448) TC41_RS06340 PF11987 Translation-initiation factor 2 TC41_RS06340 PF00009 Elongation factor Tu GTP binding domain TC41_RS06340 PF04760 Translation initiation factor IF-2, N-terminal region TC41_RS06345 PF02033 Ribosome-binding factor A TC41_RS06350 PF02272 DHHA1 domain TC41_RS06350 PF01368 DHH family TC41_RS06355 PF01509 TruB family pseudouridylate synthase (N terminal domain) TC41_RS06355 PF16198 tRNA pseudouridylate synthase B C-terminal domain TC41_RS06355 PF09142 tRNA Pseudouridine synthase II, C terminal TC41_RS06360 PF01687 Riboflavin kinase TC41_RS06360 PF06574 FAD synthetase TC41_RS06370 PF00312 Ribosomal protein S15 TC41_RS06375 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TC41_RS06375 PF03725 3' exoribonuclease family, domain 2 TC41_RS06375 PF01138 3' exoribonuclease family, domain 1 TC41_RS06375 PF00575 S1 RNA binding domain TC41_RS06375 PF00013 KH domain TC41_RS06380 PF01522 Polysaccharide deacetylase TC41_RS06385 PF05193 Peptidase M16 inactive domain TC41_RS06385 PF00675 Insulinase (Peptidase family M16) TC41_RS06390 PF00692 dUTPase TC41_RS06395 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TC41_RS06395 PF16924 Dipicolinate synthase subunit A N-terminal domain TC41_RS06400 PF02441 Flavoprotein TC41_RS06405 PF02774 Semialdehyde dehydrogenase, dimerisation domain TC41_RS06405 PF01118 Semialdehyde dehydrogenase, NAD binding domain TC41_RS06410 PF00696 Amino acid kinase family TC41_RS06410 PF13840 ACT domain TC41_RS06415 PF00701 Dihydrodipicolinate synthetase family TC41_RS06420 PF10672 S-adenosylmethionine-dependent methyltransferase TC41_RS06420 PF17785 PUA-like domain TC41_RS06425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TC41_RS06425 PF02770 Acyl-CoA dehydrogenase, middle domain TC41_RS06425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TC41_RS06430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TC41_RS06430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TC41_RS06435 PF00171 Aldehyde dehydrogenase family TC41_RS06440 PF00378 Enoyl-CoA hydratase/isomerase TC41_RS06445 PF13193 AMP-binding enzyme C-terminal domain TC41_RS06445 PF00501 AMP-binding enzyme TC41_RS06450 PF00108 Thiolase, N-terminal domain TC41_RS06450 PF02803 Thiolase, C-terminal domain TC41_RS06455 PF00106 short chain dehydrogenase TC41_RS06460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TC41_RS06460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TC41_RS06465 PF00753 Metallo-beta-lactamase superfamily TC41_RS06465 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TC41_RS06465 PF17770 Ribonuclease J C-terminal domain TC41_RS06470 PF00574 Clp protease TC41_RS06480 PF09397 Ftsk gamma domain TC41_RS06480 PF01580 FtsK/SpoIIIE family TC41_RS06480 PF17854 FtsK alpha domain TC41_RS06500 PF11868 Protein of unknown function (DUF3388) TC41_RS06505 PF13464 Domain of unknown function (DUF4115) TC41_RS06510 PF04461 Protein of unknown function (DUF520) TC41_RS06515 PF01066 CDP-alcohol phosphatidyltransferase TC41_RS06520 PF00994 Probable molybdopterin binding domain TC41_RS06520 PF02464 Competence-damaged protein TC41_RS06520 PF18146 Damage-inducible protein CinA KH domain TC41_RS06525 PF00271 Helicase conserved C-terminal domain TC41_RS06525 PF00270 DEAD/DEAH box helicase TC41_RS06530 PF00154 recA bacterial DNA recombination protein TC41_RS06535 PF02631 RecX family TC41_RS06540 PF00013 KH domain TC41_RS06540 PF12072 Domain of unknown function (DUF3552) TC41_RS06540 PF01966 HD domain TC41_RS06545 PF04232 Stage V sporulation protein S (SpoVS) TC41_RS06575 PF14398 YheC/D like ATP-grasp TC41_RS06585 PF01938 TRAM domain TC41_RS06585 PF04055 Radical SAM superfamily TC41_RS06585 PF00919 Uncharacterized protein family UPF0004 TC41_RS06595 PF00488 MutS domain V TC41_RS06595 PF05188 MutS domain II TC41_RS06595 PF05192 MutS domain III TC41_RS06595 PF01624 MutS domain I TC41_RS06595 PF05190 MutS family domain IV TC41_RS06600 PF01119 DNA mismatch repair protein, C-terminal domain TC41_RS06600 PF08676 MutL C terminal dimerisation domain TC41_RS06605 PF04445 Putative SAM-dependent methyltransferase TC41_RS06615 PF17209 Hfq protein TC41_RS06645 PF00665 Integrase core domain TC41_RS06645 PF02796 Helix-turn-helix domain of resolvase TC41_RS06650 PF01695 IstB-like ATP binding protein TC41_RS06675 PF00180 Isocitrate/isopropylmalate dehydrogenase TC41_RS06675 PF18324 Hypothetical protein TT1725 TC41_RS06680 PF03323 Bacillus/Clostridium GerA spore germination protein TC41_RS06700 PF03323 Bacillus/Clostridium GerA spore germination protein TC41_RS06705 PF16363 GDP-mannose 4,6 dehydratase TC41_RS06710 PF01943 Polysaccharide biosynthesis protein TC41_RS06710 PF14667 Polysaccharide biosynthesis C-terminal domain TC41_RS06720 PF17866 AAA lid domain TC41_RS06720 PF00004 ATPase family associated with various cellular activities (AAA) TC41_RS06740 PF13167 GTP-binding GTPase N-terminal TC41_RS06740 PF16360 GTP-binding GTPase Middle Region TC41_RS06740 PF01926 50S ribosome-binding GTPase TC41_RS06745 PF06838 Methionine gamma-lyase TC41_RS06750 PF13411 MerR HTH family regulatory protein TC41_RS06755 PF00120 Glutamine synthetase, catalytic domain TC41_RS06755 PF03951 Glutamine synthetase, beta-Grasp domain TC41_RS06765 PF08666 SAF domain TC41_RS06765 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus TC41_RS06770 PF04962 KduI/IolB family TC41_RS06775 PF01232 Mannitol dehydrogenase Rossmann domain TC41_RS06775 PF08125 Mannitol dehydrogenase C-terminal domain TC41_RS06780 PF00083 Sugar (and other) transporter TC41_RS06785 PF01726 LexA DNA binding domain TC41_RS06785 PF00717 Peptidase S24-like TC41_RS06795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TC41_RS06795 PF03129 Anticodon binding domain TC41_RS06805 PF02219 Methylenetetrahydrofolate reductase TC41_RS06805 PF02574 Homocysteine S-methyltransferase TC41_RS06815 PF17158 Membrane-associated sensor, integral membrane domain TC41_RS06815 PF00990 Diguanylate cyclase, GGDEF domain TC41_RS06840 PF01012 Electron transfer flavoprotein domain TC41_RS06840 PF00766 Electron transfer flavoprotein FAD-binding domain TC41_RS06845 PF01012 Electron transfer flavoprotein domain TC41_RS06850 PF00440 Bacterial regulatory proteins, tetR family TC41_RS06850 PF08359 YsiA-like protein, C-terminal region TC41_RS06855 PF13183 4Fe-4S dicluster domain TC41_RS06855 PF02754 Cysteine-rich domain TC41_RS06860 PF00378 Enoyl-CoA hydratase/isomerase TC41_RS06860 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TC41_RS06860 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TC41_RS06865 PF02803 Thiolase, C-terminal domain TC41_RS06865 PF00108 Thiolase, N-terminal domain TC41_RS06870 PF02770 Acyl-CoA dehydrogenase, middle domain TC41_RS06870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TC41_RS06870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TC41_RS06875 PF00501 AMP-binding enzyme TC41_RS06875 PF13193 AMP-binding enzyme C-terminal domain TC41_RS06885 PF03477 ATP cone domain TC41_RS06885 PF02867 Ribonucleotide reductase, barrel domain TC41_RS06885 PF00317 Ribonucleotide reductase, all-alpha domain TC41_RS06890 PF00268 Ribonucleotide reductase, small chain TC41_RS06895 PF13520 Amino acid permease TC41_RS06900 PF12805 FUSC-like inner membrane protein yccS TC41_RS06920 PF03618 Kinase/pyrophosphorylase TC41_RS06925 PF00571 CBS domain TC41_RS06925 PF01380 SIS domain TC41_RS06930 PF00391 PEP-utilising enzyme, mobile domain TC41_RS06930 PF02896 PEP-utilising enzyme, TIM barrel domain TC41_RS06930 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TC41_RS06935 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded TC41_RS06945 PF03737 Aldolase/RraA TC41_RS06950 PF02585 GlcNAc-PI de-N-acetylase TC41_RS06975 PF01361 Tautomerase enzyme TC41_RS06985 PF07836 DmpG-like communication domain TC41_RS06985 PF00682 HMGL-like TC41_RS06990 PF01118 Semialdehyde dehydrogenase, NAD binding domain TC41_RS06990 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation TC41_RS06995 PF01557 Fumarylacetoacetate (FAA) hydrolase family TC41_RS07000 PF00171 Aldehyde dehydrogenase family TC41_RS07010 PF01614 Bacterial transcriptional regulator TC41_RS07010 PF09339 IclR helix-turn-helix domain TC41_RS07015 PF01494 FAD binding domain TC41_RS07025 PF12804 MobA-like NTP transferase domain TC41_RS07030 PF00120 Glutamine synthetase, catalytic domain TC41_RS07030 PF03951 Glutamine synthetase, beta-Grasp domain TC41_RS07035 PF01931 Protein of unknown function DUF84 TC41_RS07040 PF01134 Glucose inhibited division protein A TC41_RS07040 PF13932 GidA associated domain TC41_RS07045 PF01566 Natural resistance-associated macrophage protein TC41_RS07050 PF01588 Putative tRNA binding domain TC41_RS07065 PF01225 Mur ligase family, catalytic domain TC41_RS07065 PF08245 Mur ligase middle domain TC41_RS07065 PF02875 Mur ligase family, glutamate ligase domain TC41_RS07070 PF07478 D-ala D-ala ligase C-terminus TC41_RS07070 PF01820 D-ala D-ala ligase N-terminus TC41_RS07075 PF07261 Replication initiation and membrane attachment TC41_RS07080 PF00152 tRNA synthetases class II (D, K and N) TC41_RS07080 PF01336 OB-fold nucleic acid binding domain TC41_RS07085 PF17862 AAA+ lid domain TC41_RS07085 PF00004 ATPase family associated with various cellular activities (AAA) TC41_RS07085 PF01434 Peptidase family M41 TC41_RS07100 PF14084 Protein of unknown function (DUF4264) TC41_RS07105 PF01975 Survival protein SurE TC41_RS07110 PF01979 Amidohydrolase family TC41_RS07115 PF01008 Initiation factor 2 subunit family TC41_RS07120 PF01048 Phosphorylase superfamily TC41_RS07135 PF02735 Ku70/Ku80 beta-barrel domain TC41_RS07140 PF00929 Exonuclease TC41_RS07140 PF04851 Type III restriction enzyme, res subunit TC41_RS07140 PF13307 Helicase C-terminal domain TC41_RS07150 PF08279 HTH domain TC41_RS07150 PF03099 Biotin/lipoate A/B protein ligase family TC41_RS07150 PF02237 Biotin protein ligase C terminal domain TC41_RS07155 PF01743 Poly A polymerase head domain TC41_RS07155 PF12627 Probable RNA and SrmB- binding site of polymerase A TC41_RS07155 PF13735 tRNA nucleotidyltransferase domain 2 putative TC41_RS07160 PF00534 Glycosyl transferases group 1 TC41_RS07160 PF13439 Glycosyltransferase Family 4 TC41_RS07165 PF05173 Dihydrodipicolinate reductase, C-terminus TC41_RS07165 PF01113 Dihydrodipicolinate reductase, N-terminus TC41_RS07170 PF03819 MazG nucleotide pyrophosphohydrolase domain TC41_RS07180 PF02673 Bacitracin resistance protein BacA TC41_RS07190 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TC41_RS07190 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TC41_RS07195 PF08864 UPF0302 domain TC41_RS07195 PF08858 IDEAL domain TC41_RS07205 PF02153 Prephenate dehydrogenase TC41_RS07210 PF18152 DAHP synthase ferredoxin-like domain TC41_RS07210 PF00793 DAHP synthetase I family TC41_RS07215 PF00290 Tryptophan synthase alpha chain TC41_RS07220 PF00291 Pyridoxal-phosphate dependent enzyme TC41_RS07225 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TC41_RS07230 PF00218 Indole-3-glycerol phosphate synthase TC41_RS07235 PF00591 Glycosyl transferase family, a/b domain TC41_RS07235 PF02885 Glycosyl transferase family, helical bundle domain TC41_RS07240 PF07736 Chorismate mutase type I TC41_RS07245 PF01761 3-dehydroquinate synthase TC41_RS07250 PF01264 Chorismate synthase TC41_RS07255 PF05343 M42 glutamyl aminopeptidase TC41_RS07260 PF05343 M42 glutamyl aminopeptidase TC41_RS07265 PF05343 M42 glutamyl aminopeptidase TC41_RS07270 PF00849 RNA pseudouridylate synthase TC41_RS07280 PF01476 LysM domain TC41_RS07280 PF00877 NlpC/P60 family TC41_RS07290 PF07728 AAA domain (dynein-related subfamily) TC41_RS07295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TC41_RS07295 PF02817 e3 binding domain TC41_RS07295 PF00364 Biotin-requiring enzyme TC41_RS07300 PF00912 Transglycosylase TC41_RS07300 PF00905 Penicillin binding protein transpeptidase domain TC41_RS07300 PF17092 Penicillin-binding protein OB-like domain TC41_RS07315 PF01739 CheR methyltransferase, SAM binding domain TC41_RS07315 PF03705 CheR methyltransferase, all-alpha domain TC41_RS07325 PF00334 Nucleoside diphosphate kinase TC41_RS07330 PF00348 Polyprenyl synthetase TC41_RS07335 PF01209 ubiE/COQ5 methyltransferase family TC41_RS07345 PF02081 Tryptophan RNA-binding attenuator protein TC41_RS07355 PF00107 Zinc-binding dehydrogenase TC41_RS07355 PF08240 Alcohol dehydrogenase GroES-like domain TC41_RS07360 PF09547 Stage IV sporulation protein A (spore_IV_A) TC41_RS07365 PF01597 Glycine cleavage H-protein TC41_RS07370 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TC41_RS07370 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TC41_RS07375 PF02660 Glycerol-3-phosphate acyltransferase TC41_RS07380 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TC41_RS07380 PF01926 50S ribosome-binding GTPase TC41_RS07390 PF00575 S1 RNA binding domain TC41_RS07410 PF07238 PilZ domain TC41_RS07410 PF07317 Flagellar regulator YcgR TC41_RS07420 PF07486 Cell Wall Hydrolase TC41_RS07420 PF01471 Putative peptidoglycan binding domain TC41_RS07430 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TC41_RS07430 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TC41_RS07435 PF05389 Negative regulator of genetic competence (MecA) TC41_RS07440 PF00356 Bacterial regulatory proteins, lacI family TC41_RS07465 PF13361 UvrD-like helicase C-terminal domain TC41_RS07465 PF00580 UvrD/REP helicase N-terminal domain TC41_RS07465 PF13361 UvrD-like helicase C-terminal domain TC41_RS07465 PF00580 UvrD/REP helicase N-terminal domain TC41_RS07475 PF08241 Methyltransferase domain TC41_RS07485 PF17820 PDZ domain TC41_RS07485 PF13180 PDZ domain TC41_RS07495 PF13367 PrsW family intramembrane metalloprotease TC41_RS07505 PF02146 Sir2 family TC41_RS07520 PF00989 PAS fold TC41_RS07520 PF00512 His Kinase A (phospho-acceptor) domain TC41_RS07520 PF18698 Histidine kinase sensor domain TC41_RS07520 PF00672 HAMP domain TC41_RS07520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS07525 PF00072 Response regulator receiver domain TC41_RS07525 PF00486 Transcriptional regulatory protein, C terminal TC41_RS07535 PF01479 S4 domain TC41_RS07535 PF00849 RNA pseudouridylate synthase TC41_RS07540 PF07670 Nucleoside recognition TC41_RS07545 PF07670 Nucleoside recognition TC41_RS07550 PF09579 Sporulation protein YtfJ (Spore_YtfJ) TC41_RS07560 PF04079 Segregation and condensation complex subunit ScpB TC41_RS07565 PF02616 Segregation and condensation protein ScpA TC41_RS07570 PF02163 Peptidase family M50 TC41_RS07580 PF14097 Stage V sporulation protein AE1 TC41_RS07585 PF03862 SpoVAC/SpoVAEB sporulation membrane protein TC41_RS07590 PF07451 Stage V sporulation protein AD (SpoVAD) TC41_RS07595 PF03862 SpoVAC/SpoVAEB sporulation membrane protein TC41_RS07600 PF04545 Sigma-70, region 4 TC41_RS07600 PF04539 Sigma-70 region 3 TC41_RS07600 PF04542 Sigma-70 region 2 TC41_RS07605 PF13581 Histidine kinase-like ATPase domain TC41_RS07610 PF01740 STAS domain TC41_RS07620 PF07943 Penicillin-binding protein 5, C-terminal domain TC41_RS07620 PF00768 D-alanyl-D-alanine carboxypeptidase TC41_RS07625 PF01676 Metalloenzyme superfamily TC41_RS07630 PF02899 Phage integrase, N-terminal SAM-like domain TC41_RS07630 PF00589 Phage integrase family TC41_RS07650 PF00293 NUDIX domain TC41_RS07655 PF07687 Peptidase dimerisation domain TC41_RS07655 PF01546 Peptidase family M20/M25/M40 TC41_RS07660 PF03099 Biotin/lipoate A/B protein ligase family TC41_RS07665 PF04055 Radical SAM superfamily TC41_RS07665 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family TC41_RS07675 PF02391 MoaE protein TC41_RS07680 PF00704 Glycosyl hydrolases family 18 TC41_RS07680 PF01476 LysM domain TC41_RS07700 PF07687 Peptidase dimerisation domain TC41_RS07700 PF01546 Peptidase family M20/M25/M40 TC41_RS07705 PF06778 Chlorite dismutase TC41_RS07715 PF00072 Response regulator receiver domain TC41_RS07715 PF08769 Sporulation initiation factor Spo0A C terminal TC41_RS07720 PF05580 SpoIVB peptidase S55 TC41_RS07720 PF17820 PDZ domain TC41_RS07725 PF02463 RecF/RecN/SMC N terminal domain TC41_RS07730 PF01513 ATP-NAD kinase TC41_RS07740 PF01479 S4 domain TC41_RS07740 PF01728 FtsJ-like methyltransferase TC41_RS07750 PF00348 Polyprenyl synthetase TC41_RS07755 PF02609 Exonuclease VII small subunit TC41_RS07760 PF02601 Exonuclease VII, large subunit TC41_RS07760 PF13742 OB-fold nucleic acid binding domain TC41_RS07765 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TC41_RS07765 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TC41_RS07770 PF07992 Pyridine nucleotide-disulphide oxidoreductase TC41_RS07775 PF00814 Glycoprotease family TC41_RS07780 PF01029 NusB family TC41_RS07800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TC41_RS07800 PF02785 Biotin carboxylase C-terminal domain TC41_RS07800 PF00289 Biotin carboxylase, N-terminal domain TC41_RS07805 PF00364 Biotin-requiring enzyme TC41_RS07825 PF09546 Stage III sporulation protein AE (spore_III_AE) TC41_RS07830 PF06686 Stage III sporulation protein AC/AD protein family TC41_RS07850 PF08207 Elongation factor P (EF-P) KOW-like domain TC41_RS07850 PF09285 Elongation factor P, C-terminal TC41_RS07850 PF01132 Elongation factor P (EF-P) OB domain TC41_RS07855 PF01220 Dehydroquinase class II TC41_RS07860 PF00300 Histidine phosphatase superfamily (branch 1) TC41_RS07865 PF02347 Glycine cleavage system P-protein TC41_RS07870 PF02347 Glycine cleavage system P-protein TC41_RS07875 PF08669 Glycine cleavage T-protein C-terminal barrel domain TC41_RS07875 PF01571 Aminomethyltransferase folate-binding domain TC41_RS07880 PF00176 SNF2 family N-terminal domain TC41_RS07880 PF00271 Helicase conserved C-terminal domain TC41_RS07885 PF11079 Bacterial protein YqhG of unknown function TC41_RS07890 PF00308 Bacterial dnaA protein TC41_RS07890 PF08299 Bacterial dnaA protein helix-turn-helix TC41_RS07895 PF01202 Shikimate kinase TC41_RS07900 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TC41_RS07900 PF18277 AbrB C-terminal domain TC41_RS07950 PF00437 Type II/IV secretion system protein TC41_RS07955 PF13614 AAA domain TC41_RS07965 PF00563 EAL domain TC41_RS07965 PF12792 CSS motif domain associated with EAL TC41_RS08060 PF00990 Diguanylate cyclase, GGDEF domain TC41_RS08060 PF03707 Bacterial signalling protein N terminal repeat TC41_RS08060 PF00563 EAL domain TC41_RS08095 PF04307 LexA-binding, inner membrane-associated putative hydrolase TC41_RS08100 PF10548 P22AR C-terminal domain TC41_RS08100 PF02498 BRO family, N-terminal domain TC41_RS08105 PF02600 Disulfide bond formation protein DsbB TC41_RS08165 PF00145 C-5 cytosine-specific DNA methylase TC41_RS08185 PF02195 ParB-like nuclease domain TC41_RS08215 PF02195 ParB-like nuclease domain TC41_RS08215 PF17762 HTH domain found in ParB protein TC41_RS08230 PF08281 Sigma-70, region 4 TC41_RS08230 PF04542 Sigma-70 region 2 TC41_RS08255 PF02086 D12 class N6 adenine-specific DNA methyltransferase TC41_RS08295 PF13005 zinc-finger binding domain of transposase IS66 TC41_RS08295 PF13817 IS66 C-terminal element TC41_RS08295 PF13007 Transposase C of IS166 homeodomain TC41_RS08295 PF03050 Transposase IS66 family TC41_RS08300 PF01022 Bacterial regulatory protein, arsR family TC41_RS08305 PF01545 Cation efflux family TC41_RS08305 PF16916 Dimerisation domain of Zinc Transporter TC41_RS08325 PF01695 IstB-like ATP binding protein TC41_RS08330 PF00665 Integrase core domain TC41_RS08350 PF00665 Integrase core domain TC41_RS08350 PF13333 Integrase core domain TC41_RS08350 PF13276 HTH-like domain TC41_RS08380 PF03050 Transposase IS66 family TC41_RS08380 PF13005 zinc-finger binding domain of transposase IS66 TC41_RS08380 PF13817 IS66 C-terminal element TC41_RS08380 PF13007 Transposase C of IS166 homeodomain TC41_RS08385 PF13005 zinc-finger binding domain of transposase IS66 TC41_RS08385 PF13007 Transposase C of IS166 homeodomain TC41_RS08385 PF03050 Transposase IS66 family TC41_RS08385 PF13817 IS66 C-terminal element TC41_RS08415 PF01494 FAD binding domain TC41_RS08425 PF01557 Fumarylacetoacetate (FAA) hydrolase family TC41_RS08430 PF07883 Cupin domain TC41_RS08440 PF07690 Major Facilitator Superfamily TC41_RS08445 PF13193 AMP-binding enzyme C-terminal domain TC41_RS08445 PF00501 AMP-binding enzyme TC41_RS08455 PF00378 Enoyl-CoA hydratase/isomerase TC41_RS08470 PF13276 HTH-like domain TC41_RS08470 PF13333 Integrase core domain TC41_RS08470 PF00665 Integrase core domain TC41_RS08475 PF00665 Integrase core domain TC41_RS08475 PF13333 Integrase core domain TC41_RS08475 PF13276 HTH-like domain TC41_RS08485 PF03050 Transposase IS66 family TC41_RS08485 PF13817 IS66 C-terminal element TC41_RS08485 PF13005 zinc-finger binding domain of transposase IS66 TC41_RS08485 PF13007 Transposase C of IS166 homeodomain TC41_RS08515 PF00929 Exonuclease TC41_RS08595 PF00712 DNA polymerase III beta subunit, N-terminal domain TC41_RS08595 PF02768 DNA polymerase III beta subunit, C-terminal domain TC41_RS08595 PF02767 DNA polymerase III beta subunit, central domain TC41_RS08690 PF01381 Helix-turn-helix TC41_RS08715 PF00872 Transposase, Mutator family TC41_RS08735 PF00482 Type II secretion system (T2SS), protein F TC41_RS08740 PF00437 Type II/IV secretion system protein TC41_RS08750 PF09269 Domain of unknown function (DUF1967) TC41_RS08750 PF01926 50S ribosome-binding GTPase TC41_RS08750 PF01018 GTP1/OBG TC41_RS08760 PF01016 Ribosomal L27 protein TC41_RS08765 PF04327 Cysteine protease Prp TC41_RS08770 PF00829 Ribosomal prokaryotic L21 protein TC41_RS08775 PF02163 Peptidase family M50 TC41_RS08785 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TC41_RS08790 PF03775 Septum formation inhibitor MinC, C-terminal domain TC41_RS08810 PF04002 RadC-like JAB domain TC41_RS08820 PF05506 Domain of unknown function (DUF756) TC41_RS08820 PF04185 Phosphoesterase family TC41_RS08825 PF07501 G5 domain TC41_RS08825 PF03990 G5-linked-Ubiquitin-like domain TC41_RS08825 PF06725 3D domain TC41_RS08830 PF02875 Mur ligase family, glutamate ligase domain TC41_RS08830 PF01225 Mur ligase family, catalytic domain TC41_RS08830 PF08245 Mur ligase middle domain TC41_RS08835 PF08245 Mur ligase middle domain TC41_RS08835 PF02875 Mur ligase family, glutamate ligase domain TC41_RS08840 PF00133 tRNA synthetases class I (I, L, M and V) TC41_RS08840 PF08264 Anticodon-binding domain of tRNA TC41_RS08840 PF10458 Valyl tRNA synthetase tRNA binding arm TC41_RS08855 PF00202 Aminotransferase class-III TC41_RS08860 PF00490 Delta-aminolevulinic acid dehydratase TC41_RS08870 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TC41_RS08870 PF03900 Porphobilinogen deaminase, C-terminal domain TC41_RS08880 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain TC41_RS08880 PF01488 Shikimate / quinate 5-dehydrogenase TC41_RS08880 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain TC41_RS08885 PF01926 50S ribosome-binding GTPase TC41_RS08890 PF00004 ATPase family associated with various cellular activities (AAA) TC41_RS08890 PF02190 ATP-dependent protease La (LON) substrate-binding domain TC41_RS08890 PF05362 Lon protease (S16) C-terminal proteolytic domain TC41_RS08895 PF00004 ATPase family associated with various cellular activities (AAA) TC41_RS08895 PF05362 Lon protease (S16) C-terminal proteolytic domain TC41_RS08900 PF06689 ClpX C4-type zinc finger TC41_RS08900 PF10431 C-terminal, D2-small domain, of ClpB protein TC41_RS08900 PF07724 AAA domain (Cdc48 subfamily) TC41_RS08905 PF00574 Clp protease TC41_RS08910 PF05697 Bacterial trigger factor protein (TF) TC41_RS08910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TC41_RS08910 PF05698 Bacterial trigger factor protein (TF) C-terminus TC41_RS08925 PF01725 Ham1 family TC41_RS08930 PF01177 Asp/Glu/Hydantoin racemase TC41_RS08935 PF01047 MarR family TC41_RS08940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TC41_RS08940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TC41_RS08940 PF02770 Acyl-CoA dehydrogenase, middle domain TC41_RS08945 PF02515 CoA-transferase family III TC41_RS08960 PF00196 Bacterial regulatory proteins, luxR family TC41_RS08965 PF00155 Aminotransferase class I and II TC41_RS08975 PF00392 Bacterial regulatory proteins, gntR family TC41_RS08975 PF07702 UTRA domain TC41_RS08980 PF07690 Major Facilitator Superfamily TC41_RS08985 PF12368 Rhodanase C-terminal TC41_RS08985 PF00581 Rhodanese-like domain TC41_RS08985 PF17773 UPF0176 acylphosphatase like domain TC41_RS08995 PF13183 4Fe-4S dicluster domain TC41_RS08995 PF13085 2Fe-2S iron-sulfur cluster binding domain TC41_RS09000 PF00890 FAD binding domain TC41_RS09000 PF02910 Fumarate reductase flavoprotein C-term TC41_RS09005 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TC41_RS09010 PF01541 GIY-YIG catalytic domain TC41_RS09010 PF02151 UvrB/uvrC motif TC41_RS09010 PF08459 UvrC Helix-hairpin-helix N-terminal TC41_RS09035 PF00749 tRNA synthetases class I (E and Q), catalytic domain TC41_RS09045 PF00155 Aminotransferase class I and II TC41_RS09055 PF01699 Sodium/calcium exchanger protein TC41_RS09085 PF00535 Glycosyl transferase family 2 TC41_RS09095 PF01047 MarR family TC41_RS09110 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) TC41_RS09115 PF13396 Phospholipase_D-nuclease N-terminal TC41_RS09115 PF13091 PLD-like domain TC41_RS09120 PF00893 Small Multidrug Resistance protein TC41_RS09125 PF01545 Cation efflux family TC41_RS09125 PF16916 Dimerisation domain of Zinc Transporter TC41_RS09130 PF00317 Ribonucleotide reductase, all-alpha domain TC41_RS09130 PF02867 Ribonucleotide reductase, barrel domain TC41_RS09130 PF03477 ATP cone domain TC41_RS09135 PF03477 ATP cone domain TC41_RS09140 PF13344 Haloacid dehalogenase-like hydrolase TC41_RS09145 PF16123 Hydroxyacylglutathione hydrolase C-terminus TC41_RS09145 PF00753 Metallo-beta-lactamase superfamily TC41_RS09155 PF00535 Glycosyl transferase family 2 TC41_RS09160 PF00892 EamA-like transporter family TC41_RS09165 PF01678 Diaminopimelate epimerase TC41_RS09180 PF00232 Glycosyl hydrolase family 1 TC41_RS09185 PF00005 ABC transporter TC41_RS09185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TC41_RS09190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TC41_RS09190 PF00005 ABC transporter TC41_RS09195 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS09195 PF12911 N-terminal TM domain of oligopeptide transport permease C TC41_RS09200 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS09205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TC41_RS09215 PF00037 4Fe-4S binding domain TC41_RS09215 PF12800 4Fe-4S binding domain TC41_RS09220 PF00005 ABC transporter TC41_RS09225 PF01895 PhoU domain TC41_RS09230 PF01476 LysM domain TC41_RS09230 PF00877 NlpC/P60 family TC41_RS09235 PF01613 Flavin reductase like domain TC41_RS09240 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase TC41_RS09240 PF00534 Glycosyl transferases group 1 TC41_RS09250 PF01522 Polysaccharide deacetylase TC41_RS09255 PF04101 Glycosyltransferase family 28 C-terminal domain TC41_RS09255 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase TC41_RS09260 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS09265 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS09270 PF12849 PBP superfamily domain TC41_RS09280 PF12697 Alpha/beta hydrolase family TC41_RS09285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TC41_RS09285 PF16582 Middle domain of thiamine pyrophosphate TC41_RS09285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TC41_RS09290 PF00425 chorismate binding enzyme TC41_RS09295 PF13193 AMP-binding enzyme C-terminal domain TC41_RS09295 PF00501 AMP-binding enzyme TC41_RS09300 PF00378 Enoyl-CoA hydratase/isomerase TC41_RS09305 PF01040 UbiA prenyltransferase family TC41_RS09310 PF02634 FdhD/NarQ family TC41_RS09315 PF07849 Protein of unknown function (DUF1641) TC41_RS09320 PF12838 4Fe-4S dicluster domain TC41_RS09320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TC41_RS09320 PF00384 Molybdopterin oxidoreductase TC41_RS09320 PF01568 Molydopterin dinucleotide binding domain TC41_RS09320 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TC41_RS09325 PF03190 Protein of unknown function, DUF255 TC41_RS09330 PF03190 Protein of unknown function, DUF255 TC41_RS09340 PF00892 EamA-like transporter family TC41_RS09350 PF03070 TENA/THI-4/PQQC family TC41_RS09355 PF08543 Phosphomethylpyrimidine kinase TC41_RS09360 PF02110 Hydroxyethylthiazole kinase family TC41_RS09365 PF02581 Thiamine monophosphate synthase TC41_RS09380 PF03323 Bacillus/Clostridium GerA spore germination protein TC41_RS09385 PF01645 Conserved region in glutamate synthase TC41_RS09390 PF00664 ABC transporter transmembrane region TC41_RS09390 PF00005 ABC transporter TC41_RS09395 PF00005 ABC transporter TC41_RS09395 PF00664 ABC transporter transmembrane region TC41_RS09400 PF02322 Cytochrome bd terminal oxidase subunit II TC41_RS09405 PF01654 Cytochrome bd terminal oxidase subunit I TC41_RS09410 PF07690 Major Facilitator Superfamily TC41_RS09415 PF01047 MarR family TC41_RS09425 PF00005 ABC transporter TC41_RS09430 PF01032 FecCD transport family TC41_RS09435 PF01497 Periplasmic binding protein TC41_RS09445 PF01923 Cobalamin adenosyltransferase TC41_RS09450 PF02277 Phosphoribosyltransferase TC41_RS09455 PF01638 HxlR-like helix-turn-helix TC41_RS09460 PF01242 6-pyruvoyl tetrahydropterin synthase TC41_RS09465 PF04055 Radical SAM superfamily TC41_RS09475 PF00269 Small, acid-soluble spore proteins, alpha/beta type TC41_RS09480 PF02541 Ppx/GppA phosphatase family TC41_RS09485 PF01790 Prolipoprotein diacylglyceryl transferase TC41_RS09495 PF04204 Homoserine O-succinyltransferase TC41_RS09510 PF02261 Aspartate decarboxylase TC41_RS09530 PF03323 Bacillus/Clostridium GerA spore germination protein TC41_RS09550 PF00989 PAS fold TC41_RS09550 PF08447 PAS fold TC41_RS09550 PF00512 His Kinase A (phospho-acceptor) domain TC41_RS09550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS09565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TC41_RS09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS09570 PF18698 Histidine kinase sensor domain TC41_RS09570 PF00512 His Kinase A (phospho-acceptor) domain TC41_RS09570 PF00989 PAS fold TC41_RS09570 PF00672 HAMP domain TC41_RS09575 PF00486 Transcriptional regulatory protein, C terminal TC41_RS09575 PF00072 Response regulator receiver domain TC41_RS09600 PF01784 NIF3 (NGG1p interacting factor 3) TC41_RS09605 PF04816 tRNA (adenine(22)-N(1))-methyltransferase TC41_RS09615 PF04539 Sigma-70 region 3 TC41_RS09615 PF03979 Sigma-70 factor, region 1.1 TC41_RS09615 PF04545 Sigma-70, region 4 TC41_RS09615 PF00140 Sigma-70 factor, region 1.2 TC41_RS09615 PF04542 Sigma-70 region 2 TC41_RS09620 PF10410 DnaB-helicase binding domain of primase TC41_RS09620 PF01807 CHC2 zinc finger TC41_RS09620 PF08275 DNA primase catalytic core, N-terminal domain TC41_RS09625 PF11967 Recombination protein O N terminal TC41_RS09625 PF02565 Recombination protein O C terminal TC41_RS09630 PF01926 50S ribosome-binding GTPase TC41_RS09630 PF07650 KH domain TC41_RS09640 PF02130 Uncharacterized protein family UPF0054 TC41_RS09645 PF01966 HD domain TC41_RS09645 PF07697 7TM-HD extracellular TC41_RS09645 PF07698 7TM receptor with intracellular HD hydrolase TC41_RS09650 PF02562 PhoH-like protein TC41_RS09665 PF09424 Yqey-like protein TC41_RS09670 PF01165 Ribosomal protein S21 TC41_RS09680 PF01791 DeoC/LacD family aldolase TC41_RS09685 PF04055 Radical SAM superfamily TC41_RS09685 PF01938 TRAM domain TC41_RS09685 PF00919 Uncharacterized protein family UPF0004 TC41_RS09690 PF04452 RNA methyltransferase TC41_RS09700 PF00226 DnaJ domain TC41_RS09700 PF01556 DnaJ C terminal domain TC41_RS09700 PF00684 DnaJ central domain TC41_RS09705 PF00012 Hsp70 protein TC41_RS09710 PF01025 GrpE TC41_RS09715 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding TC41_RS09715 PF01628 HrcA protein C terminal domain TC41_RS09720 PF04055 Radical SAM superfamily TC41_RS09720 PF06969 HemN C-terminal domain TC41_RS09725 PF00679 Elongation factor G C-terminus TC41_RS09725 PF00009 Elongation factor Tu GTP binding domain TC41_RS09725 PF03144 Elongation factor Tu domain 2 TC41_RS09725 PF06421 GTP-binding protein LepA C-terminus TC41_RS09740 PF01464 Transglycosylase SLT domain TC41_RS09745 PF03418 Germination protease TC41_RS09750 PF01649 Ribosomal protein S20 TC41_RS09765 PF07992 Pyridine nucleotide-disulphide oxidoreductase TC41_RS09775 PF10531 SLBB domain TC41_RS09780 PF02742 Iron dependent repressor, metal binding and dimerisation domain TC41_RS09780 PF01325 Iron dependent repressor, N-terminal DNA binding domain TC41_RS09785 PF13649 Methyltransferase domain TC41_RS09795 PF01966 HD domain TC41_RS09800 PF01467 Cytidylyltransferase-like TC41_RS09805 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TC41_RS09805 PF01488 Shikimate / quinate 5-dehydrogenase TC41_RS09805 PF08501 Shikimate dehydrogenase substrate binding domain TC41_RS09810 PF01926 50S ribosome-binding GTPase TC41_RS09825 PF04542 Sigma-70 region 2 TC41_RS09825 PF04545 Sigma-70, region 4 TC41_RS09845 PF03652 Holliday junction resolvase TC41_RS09850 PF06135 IreB regulatory phosphoprotein TC41_RS09855 PF01411 tRNA synthetases class II (A) TC41_RS09855 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TC41_RS09855 PF02272 DHHA1 domain TC41_RS09860 PF01594 AI-2E family transporter TC41_RS09870 PF00266 Aminotransferase class-V TC41_RS09875 PF02082 Transcriptional regulator TC41_RS09880 PF16193 AAA C-terminal domain TC41_RS09880 PF12002 MgsA AAA+ ATPase C terminal TC41_RS09880 PF00004 ATPase family associated with various cellular activities (AAA) TC41_RS09890 PF01451 Low molecular weight phosphotyrosine protein phosphatase TC41_RS09895 PF02040 Arsenical pump membrane protein TC41_RS09900 PF00501 AMP-binding enzyme TC41_RS09900 PF13193 AMP-binding enzyme C-terminal domain TC41_RS09905 PF01336 OB-fold nucleic acid binding domain TC41_RS09905 PF00152 tRNA synthetases class II (D, K and N) TC41_RS09905 PF02938 GAD domain TC41_RS09910 PF13393 Histidyl-tRNA synthetase TC41_RS09910 PF03129 Anticodon binding domain TC41_RS09915 PF00202 Aminotransferase class-III TC41_RS09930 PF00005 ABC transporter TC41_RS09940 PF07690 Major Facilitator Superfamily TC41_RS09950 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS09955 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS09970 PF00378 Enoyl-CoA hydratase/isomerase TC41_RS09975 PF01039 Carboxyl transferase domain TC41_RS09980 PF00682 HMGL-like TC41_RS09985 PF00364 Biotin-requiring enzyme TC41_RS09990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TC41_RS09990 PF00289 Biotin carboxylase, N-terminal domain TC41_RS09990 PF02785 Biotin carboxylase C-terminal domain TC41_RS09995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TC41_RS09995 PF02770 Acyl-CoA dehydrogenase, middle domain TC41_RS09995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TC41_RS10000 PF13193 AMP-binding enzyme C-terminal domain TC41_RS10000 PF00501 AMP-binding enzyme TC41_RS10000 PF16177 Acetyl-coenzyme A synthetase N-terminus TC41_RS10005 PF02803 Thiolase, C-terminal domain TC41_RS10005 PF00108 Thiolase, N-terminal domain TC41_RS10010 PF01144 Coenzyme A transferase TC41_RS10015 PF01144 Coenzyme A transferase TC41_RS10030 PF14489 QueF-like protein TC41_RS10035 PF01189 16S rRNA methyltransferase RsmB/F TC41_RS10035 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF TC41_RS10035 PF17126 RsmF rRNA methyltransferase first C-terminal domain TC41_RS10040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TC41_RS10040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TC41_RS10060 PF02585 GlcNAc-PI de-N-acetylase TC41_RS10065 PF00248 Aldo/keto reductase family TC41_RS10075 PF00483 Nucleotidyl transferase TC41_RS10080 PF00877 NlpC/P60 family TC41_RS10080 PF01476 LysM domain TC41_RS10080 PF08239 Bacterial SH3 domain TC41_RS10085 PF13361 UvrD-like helicase C-terminal domain TC41_RS10085 PF00580 UvrD/REP helicase N-terminal domain TC41_RS10085 PF12705 PD-(D/E)XK nuclease superfamily TC41_RS10090 PF13361 UvrD-like helicase C-terminal domain TC41_RS10090 PF12705 PD-(D/E)XK nuclease superfamily TC41_RS10095 PF07690 Major Facilitator Superfamily TC41_RS10100 PF01207 Dihydrouridine synthase (Dus) TC41_RS10115 PF07943 Penicillin-binding protein 5, C-terminal domain TC41_RS10115 PF00768 D-alanyl-D-alanine carboxypeptidase TC41_RS10120 PF18357 Diphteria toxin repressor SH3 domain TC41_RS10120 PF02742 Iron dependent repressor, metal binding and dimerisation domain TC41_RS10120 PF01325 Iron dependent repressor, N-terminal DNA binding domain TC41_RS10125 PF01557 Fumarylacetoacetate (FAA) hydrolase family TC41_RS10130 PF06491 Disulphide isomerase TC41_RS10135 PF01208 Uroporphyrinogen decarboxylase (URO-D) TC41_RS10140 PF00762 Ferrochelatase TC41_RS10145 PF01593 Flavin containing amine oxidoreductase TC41_RS10155 PF01925 Sulfite exporter TauE/SafE TC41_RS10170 PF02580 D-Tyr-tRNA(Tyr) deacylase TC41_RS10175 PF04607 Region found in RelA / SpoT proteins TC41_RS10175 PF02824 TGS domain TC41_RS10175 PF13291 ACT domain TC41_RS10180 PF00156 Phosphoribosyl transferase domain TC41_RS10185 PF17768 RecJ OB domain TC41_RS10185 PF02272 DHHA1 domain TC41_RS10185 PF01368 DHH family TC41_RS10185 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TC41_RS10190 PF01545 Cation efflux family TC41_RS10190 PF16916 Dimerisation domain of Zinc Transporter TC41_RS10195 PF02355 Protein export membrane protein TC41_RS10200 PF02355 Protein export membrane protein TC41_RS10205 PF13797 Post-transcriptional regulator TC41_RS10210 PF01943 Polysaccharide biosynthesis protein TC41_RS10210 PF14667 Polysaccharide biosynthesis C-terminal domain TC41_RS10215 PF04239 Protein of unknown function (DUF421) TC41_RS10220 PF17158 Membrane-associated sensor, integral membrane domain TC41_RS10220 PF00990 Diguanylate cyclase, GGDEF domain TC41_RS10235 PF01702 Queuine tRNA-ribosyltransferase TC41_RS10240 PF02547 Queuosine biosynthesis protein TC41_RS10250 PF04542 Sigma-70 region 2 TC41_RS10255 PF05496 Holliday junction DNA helicase RuvB P-loop domain TC41_RS10255 PF05491 RuvB C-terminal winged helix domain TC41_RS10255 PF17864 RuvB AAA lid domain TC41_RS10260 PF07499 RuvA, C-terminal domain TC41_RS10260 PF01330 RuvA N terminal domain TC41_RS10265 PF02075 Crossover junction endodeoxyribonuclease RuvC TC41_RS10275 PF01709 Transcriptional regulator TC41_RS10280 PF02540 NAD synthase TC41_RS10285 PF02540 NAD synthase TC41_RS10285 PF00795 Carbon-nitrogen hydrolase TC41_RS10305 PF01479 S4 domain TC41_RS10305 PF00579 tRNA synthetases class I (W and Y) TC41_RS10310 PF00912 Transglycosylase TC41_RS10310 PF00905 Penicillin binding protein transpeptidase domain TC41_RS10315 PF01713 Smr domain TC41_RS10315 PF00488 MutS domain V TC41_RS10330 PF05164 Cell division protein ZapA TC41_RS10335 PF03483 B3/4 domain TC41_RS10335 PF03484 tRNA synthetase B5 domain TC41_RS10335 PF03147 Ferredoxin-fold anticodon binding domain TC41_RS10335 PF01588 Putative tRNA binding domain TC41_RS10335 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TC41_RS10340 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TC41_RS10340 PF01409 tRNA synthetases class II core domain (F) TC41_RS10345 PF02222 ATP-grasp domain TC41_RS10345 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain TC41_RS10350 PF00731 AIR carboxylase TC41_RS10355 PF01791 DeoC/LacD family aldolase TC41_RS10360 PF00365 Phosphofructokinase TC41_RS10365 PF00311 Phosphoenolpyruvate carboxylase TC41_RS10370 PF00672 HAMP domain TC41_RS10370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TC41_RS10370 PF02743 Cache domain TC41_RS10375 PF00381 PTS HPr component phosphorylation site TC41_RS10380 PF00005 ABC transporter TC41_RS10380 PF17912 MalK OB fold domain TC41_RS10380 PF03459 TOBE domain TC41_RS10390 PF03949 Malic enzyme, NAD binding domain TC41_RS10390 PF00390 Malic enzyme, N-terminal domain TC41_RS10395 PF06039 Malate:quinone oxidoreductase (Mqo) TC41_RS10400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TC41_RS10400 PF00364 Biotin-requiring enzyme TC41_RS10400 PF02817 e3 binding domain TC41_RS10405 PF16078 2-oxoglutarate dehydrogenase N-terminus TC41_RS10405 PF00676 Dehydrogenase E1 component TC41_RS10405 PF16870 2-oxoglutarate dehydrogenase C-terminal TC41_RS10405 PF02779 Transketolase, pyrimidine binding domain TC41_RS10415 PF17863 AAA lid domain TC41_RS10415 PF07726 ATPase family associated with various cellular activities (AAA) TC41_RS10430 PF01238 Phosphomannose isomerase type I TC41_RS10435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TC41_RS10435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TC41_RS10445 PF00892 EamA-like transporter family TC41_RS10450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TC41_RS10450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TC41_RS10455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TC41_RS10455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TC41_RS10460 PF01261 Xylose isomerase-like TIM barrel TC41_RS10485 PF00588 SpoU rRNA Methylase family TC41_RS10485 PF12105 SpoU, rRNA methylase, C-terminal TC41_RS10490 PF13536 Putative multidrug resistance efflux transporter TC41_RS10495 PF00583 Acetyltransferase (GNAT) family TC41_RS10495 PF00814 Glycoprotease family TC41_RS10500 PF00561 alpha/beta hydrolase fold TC41_RS10505 PF00324 Amino acid permease TC41_RS10510 PF05067 Manganese containing catalase TC41_RS10515 PF12652 CotJB protein TC41_RS10525 PF02681 Divergent PAP2 family TC41_RS10530 PF08032 RNA 2'-O ribose methyltransferase substrate binding TC41_RS10530 PF00588 SpoU rRNA Methylase family TC41_RS10535 PF00453 Ribosomal protein L20 TC41_RS10540 PF01632 Ribosomal protein L35 TC41_RS10545 PF00707 Translation initiation factor IF-3, C-terminal domain TC41_RS10545 PF05198 Translation initiation factor IF-3, N-terminal domain TC41_RS10555 PF13649 Methyltransferase domain TC41_RS10560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TC41_RS10560 PF03129 Anticodon binding domain TC41_RS10560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TC41_RS10560 PF02824 TGS domain TC41_RS10580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TC41_RS10580 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TC41_RS10585 PF01261 Xylose isomerase-like TIM barrel TC41_RS10590 PF07690 Major Facilitator Superfamily TC41_RS10595 PF00149 Calcineurin-like phosphoesterase TC41_RS10620 PF00106 short chain dehydrogenase TC41_RS10630 PF00860 Permease family TC41_RS10680 PF00313 'Cold-shock' DNA-binding domain TC41_RS10695 PF00248 Aldo/keto reductase family TC41_RS10700 PF02040 Arsenical pump membrane protein TC41_RS10715 PF00474 Sodium:solute symporter family TC41_RS10720 PF00248 Aldo/keto reductase family TC41_RS10725 PF01261 Xylose isomerase-like TIM barrel TC41_RS10735 PF01329 Pterin 4 alpha carbinolamine dehydratase TC41_RS10770 PF02675 S-adenosylmethionine decarboxylase TC41_RS10780 PF17101 Stealth protein CR1, conserved region 1 TC41_RS10780 PF00534 Glycosyl transferases group 1 TC41_RS10780 PF17103 Stealth protein CR4, conserved region 4 TC41_RS10780 PF17102 Stealth protein CR3, conserved region 3 TC41_RS10780 PF11380 Stealth protein CR2, conserved region 2 TC41_RS10790 PF12704 MacB-like periplasmic core domain TC41_RS10790 PF02687 FtsX-like permease family TC41_RS10795 PF00005 ABC transporter TC41_RS10795 PF02687 FtsX-like permease family TC41_RS10795 PF12704 MacB-like periplasmic core domain TC41_RS10810 PF00571 CBS domain TC41_RS10815 PF00269 Small, acid-soluble spore proteins, alpha/beta type TC41_RS10820 PF00285 Citrate synthase, C-terminal domain TC41_RS10825 PF02659 Putative manganese efflux pump TC41_RS10835 PF00694 Aconitase C-terminal domain TC41_RS10840 PF00330 Aconitase family (aconitate hydratase) TC41_RS10845 PF00180 Isocitrate/isopropylmalate dehydrogenase TC41_RS10850 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TC41_RS10850 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TC41_RS10855 PF01842 ACT domain TC41_RS10855 PF10369 Small subunit of acetolactate synthase TC41_RS10860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TC41_RS10860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TC41_RS10860 PF00205 Thiamine pyrophosphate enzyme, central domain TC41_RS10865 PF00920 Dehydratase family TC41_RS10870 PF01063 Amino-transferase class IV TC41_RS10875 PF03447 Homoserine dehydrogenase, NAD binding domain TC41_RS10875 PF00742 Homoserine dehydrogenase TC41_RS10875 PF01842 ACT domain TC41_RS10880 PF00294 pfkB family carbohydrate kinase TC41_RS10890 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS10895 PF01547 Bacterial extracellular solute-binding protein TC41_RS10900 PF00356 Bacterial regulatory proteins, lacI family TC41_RS10915 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS10920 PF10417 C-terminal domain of 1-Cys peroxiredoxin TC41_RS10920 PF00578 AhpC/TSA family TC41_RS10950 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TC41_RS10950 PF18277 AbrB C-terminal domain TC41_RS10995 PF00437 Type II/IV secretion system protein TC41_RS11005 PF13614 AAA domain TC41_RS11015 PF12792 CSS motif domain associated with EAL TC41_RS11015 PF00563 EAL domain TC41_RS11040 PF00216 Bacterial DNA-binding protein TC41_RS11100 PF00072 Response regulator receiver domain TC41_RS11105 PF00563 EAL domain TC41_RS11105 PF03707 Bacterial signalling protein N terminal repeat TC41_RS11105 PF00990 Diguanylate cyclase, GGDEF domain TC41_RS11130 PF07282 Putative transposase DNA-binding domain TC41_RS11130 PF12323 Helix-turn-helix domain TC41_RS11130 PF01385 Probable transposase TC41_RS11145 PF02498 BRO family, N-terminal domain TC41_RS11145 PF10548 P22AR C-terminal domain TC41_RS11200 PF17820 PDZ domain TC41_RS11200 PF02163 Peptidase family M50 TC41_RS11255 PF02195 ParB-like nuclease domain TC41_RS11265 PF00145 C-5 cytosine-specific DNA methylase TC41_RS11295 PF08281 Sigma-70, region 4 TC41_RS11295 PF04542 Sigma-70 region 2 TC41_RS11330 PF02086 D12 class N6 adenine-specific DNA methyltransferase TC41_RS11345 PF02163 Peptidase family M50 TC41_RS11345 PF17820 PDZ domain TC41_RS11360 PF01934 Protein of unknown function DUF86 TC41_RS11375 PF00149 Calcineurin-like phosphoesterase TC41_RS11415 PF00817 impB/mucB/samB family TC41_RS11415 PF11799 impB/mucB/samB family C-terminal domain TC41_RS11430 PF13614 AAA domain TC41_RS11435 PF00929 Exonuclease TC41_RS11445 PF01202 Shikimate kinase TC41_RS11480 PF00712 DNA polymerase III beta subunit, N-terminal domain TC41_RS11480 PF02767 DNA polymerase III beta subunit, central domain TC41_RS11480 PF02768 DNA polymerase III beta subunit, C-terminal domain TC41_RS11520 PF02498 BRO family, N-terminal domain TC41_RS11520 PF10548 P22AR C-terminal domain TC41_RS11605 PF01476 LysM domain TC41_RS11605 PF00704 Glycosyl hydrolases family 18 TC41_RS11610 PF00324 Amino acid permease TC41_RS11640 PF00005 ABC transporter TC41_RS11640 PF00664 ABC transporter transmembrane region TC41_RS11645 PF00664 ABC transporter transmembrane region TC41_RS11645 PF00005 ABC transporter TC41_RS11660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TC41_RS11665 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS11670 PF12911 N-terminal TM domain of oligopeptide transport permease C TC41_RS11670 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS11675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TC41_RS11680 PF00005 ABC transporter TC41_RS11680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TC41_RS11685 PF00005 ABC transporter TC41_RS11685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TC41_RS11690 PF00486 Transcriptional regulatory protein, C terminal TC41_RS11690 PF00072 Response regulator receiver domain TC41_RS11695 PF00672 HAMP domain TC41_RS11695 PF00512 His Kinase A (phospho-acceptor) domain TC41_RS11695 PF18698 Histidine kinase sensor domain TC41_RS11695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS11705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS11705 PF00512 His Kinase A (phospho-acceptor) domain TC41_RS11705 PF18719 ArlS sensor domain TC41_RS11710 PF00486 Transcriptional regulatory protein, C terminal TC41_RS11710 PF00072 Response regulator receiver domain TC41_RS11715 PF03466 LysR substrate binding domain TC41_RS11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TC41_RS11725 PF06580 Histidine kinase TC41_RS11725 PF02743 Cache domain TC41_RS11725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS11725 PF00672 HAMP domain TC41_RS11730 PF00665 Integrase core domain TC41_RS11745 PF00072 Response regulator receiver domain TC41_RS11745 PF12833 Helix-turn-helix domain TC41_RS11750 PF13407 Periplasmic binding protein domain TC41_RS11755 PF02653 Branched-chain amino acid transport system / permease component TC41_RS11760 PF00005 ABC transporter TC41_RS11765 PF03372 Endonuclease/Exonuclease/phosphatase family TC41_RS11780 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TC41_RS11780 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TC41_RS11785 PF04198 Putative sugar-binding domain TC41_RS11790 PF00485 Phosphoribulokinase / Uridine kinase family TC41_RS11795 PF00005 ABC transporter TC41_RS11795 PF00664 ABC transporter transmembrane region TC41_RS11800 PF00005 ABC transporter TC41_RS11800 PF00664 ABC transporter transmembrane region TC41_RS11805 PF12833 Helix-turn-helix domain TC41_RS11805 PF10114 Sensory domain found in PocR TC41_RS11815 PF01641 SelR domain TC41_RS11825 PF00459 Inositol monophosphatase family TC41_RS11830 PF03786 D-mannonate dehydratase (UxuA) TC41_RS11835 PF02581 Thiamine monophosphate synthase TC41_RS11840 PF00294 pfkB family carbohydrate kinase TC41_RS11845 PF02595 Glycerate kinase family TC41_RS11895 PF07690 Major Facilitator Superfamily TC41_RS11905 PF00480 ROK family TC41_RS11905 PF01047 MarR family TC41_RS11910 PF02743 Cache domain TC41_RS11910 PF00672 HAMP domain TC41_RS11910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TC41_RS11930 PF03069 Acetamidase/Formamidase family TC41_RS11945 PF00072 Response regulator receiver domain TC41_RS11945 PF01966 HD domain TC41_RS11950 PF13089 Polyphosphate kinase N-terminal domain TC41_RS11950 PF13090 Polyphosphate kinase C-terminal domain 2 TC41_RS11950 PF02503 Polyphosphate kinase middle domain TC41_RS11950 PF17941 Polyphosphate kinase C-terminal domain 1 TC41_RS11965 PF07690 Major Facilitator Superfamily TC41_RS11985 PF08220 DeoR-like helix-turn-helix domain TC41_RS11985 PF00455 DeoR C terminal sensor domain TC41_RS11990 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain TC41_RS11990 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain TC41_RS11995 PF08544 GHMP kinases C terminal TC41_RS11995 PF00288 GHMP kinases N terminal domain TC41_RS11995 PF10509 Galactokinase galactose-binding signature TC41_RS12010 PF00331 Glycosyl hydrolase family 10 TC41_RS12020 PF08240 Alcohol dehydrogenase GroES-like domain TC41_RS12020 PF00107 Zinc-binding dehydrogenase TC41_RS12030 PF03717 Penicillin-binding Protein dimerisation domain TC41_RS12030 PF00905 Penicillin binding protein transpeptidase domain TC41_RS12060 PF02898 Nitric oxide synthase, oxygenase domain TC41_RS12065 PF01145 SPFH domain / Band 7 family TC41_RS12080 PF02829 3H domain TC41_RS12080 PF08279 HTH domain TC41_RS12090 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain TC41_RS12090 PF01464 Transglycosylase SLT domain TC41_RS12095 PF01121 Dephospho-CoA kinase TC41_RS12100 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain TC41_RS12100 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain TC41_RS12100 PF06827 Zinc finger found in FPG and IleRS TC41_RS12105 PF00476 DNA polymerase family A TC41_RS12105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TC41_RS12105 PF01367 5'-3' exonuclease, C-terminal SAM fold TC41_RS12110 PF00800 Prephenate dehydratase TC41_RS12110 PF01817 Chorismate mutase type II TC41_RS12110 PF01842 ACT domain TC41_RS12115 PF00056 lactate/malate dehydrogenase, NAD binding domain TC41_RS12115 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TC41_RS12120 PF00180 Isocitrate/isopropylmalate dehydrogenase TC41_RS12130 PF00486 Transcriptional regulatory protein, C terminal TC41_RS12130 PF00072 Response regulator receiver domain TC41_RS12135 PF00579 tRNA synthetases class I (W and Y) TC41_RS12140 PF00391 PEP-utilising enzyme, mobile domain TC41_RS12140 PF02887 Pyruvate kinase, alpha/beta domain TC41_RS12140 PF00224 Pyruvate kinase, barrel domain TC41_RS12145 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TC41_RS12150 PF17848 Acetyl-coA carboxylase zinc finger domain TC41_RS12150 PF01039 Carboxyl transferase domain TC41_RS12160 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TC41_RS12160 PF07733 Bacterial DNA polymerase III alpha NTPase domain TC41_RS12160 PF14579 Helix-hairpin-helix motif TC41_RS12160 PF02811 PHP domain TC41_RS12160 PF01336 OB-fold nucleic acid binding domain TC41_RS12165 PF07085 DRTGG domain TC41_RS12165 PF00571 CBS domain TC41_RS12165 PF03061 Thioesterase superfamily TC41_RS12165 PF00392 Bacterial regulatory proteins, gntR family TC41_RS12190 PF00291 Pyridoxal-phosphate dependent enzyme TC41_RS12195 PF02863 Arginine repressor, C-terminal domain TC41_RS12195 PF01316 Arginine repressor, DNA binding domain TC41_RS12200 PF00817 impB/mucB/samB family TC41_RS12200 PF11798 IMS family HHH motif TC41_RS12200 PF11799 impB/mucB/samB family C-terminal domain TC41_RS12230 PF06133 Control of competence regulator ComK, YlbF/YmcA TC41_RS12235 PF01152 Bacterial-like globin TC41_RS12255 PF00133 tRNA synthetases class I (I, L, M and V) TC41_RS12255 PF08264 Anticodon-binding domain of tRNA TC41_RS12260 PF00561 alpha/beta hydrolase fold TC41_RS12260 PF08386 TAP-like protein TC41_RS12265 PF00132 Bacterial transferase hexapeptide (six repeats) TC41_RS12270 PF01546 Peptidase family M20/M25/M40 TC41_RS12270 PF07687 Peptidase dimerisation domain TC41_RS12275 PF06018 CodY GAF-like domain TC41_RS12275 PF08222 CodY helix-turn-helix domain TC41_RS12280 PF01371 Trp repressor protein TC41_RS12290 PF07731 Multicopper oxidase TC41_RS12290 PF07732 Multicopper oxidase TC41_RS12290 PF00394 Multicopper oxidase TC41_RS12305 PF08671 Anti-repressor SinI TC41_RS12305 PF01381 Helix-turn-helix TC41_RS12335 PF03129 Anticodon binding domain TC41_RS12335 PF09180 Prolyl-tRNA synthetase, C-terminal TC41_RS12335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TC41_RS12355 PF00107 Zinc-binding dehydrogenase TC41_RS12355 PF08240 Alcohol dehydrogenase GroES-like domain TC41_RS12360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TC41_RS12360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TC41_RS12360 PF02770 Acyl-CoA dehydrogenase, middle domain TC41_RS12365 PF13193 AMP-binding enzyme C-terminal domain TC41_RS12365 PF00501 AMP-binding enzyme TC41_RS12370 PF00550 Phosphopantetheine attachment site TC41_RS12380 PF07992 Pyridine nucleotide-disulphide oxidoreductase TC41_RS12380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TC41_RS12385 PF00501 AMP-binding enzyme TC41_RS12385 PF13193 AMP-binding enzyme C-terminal domain TC41_RS12390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TC41_RS12390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TC41_RS12390 PF02770 Acyl-CoA dehydrogenase, middle domain TC41_RS12395 PF18152 DAHP synthase ferredoxin-like domain TC41_RS12395 PF00793 DAHP synthetase I family TC41_RS12405 PF01476 LysM domain TC41_RS12405 PF03734 L,D-transpeptidase catalytic domain TC41_RS12415 PF02080 TrkA-C domain TC41_RS12415 PF03471 Transporter associated domain TC41_RS12415 PF00999 Sodium/hydrogen exchanger family TC41_RS12440 PF02801 Beta-ketoacyl synthase, C-terminal domain TC41_RS12440 PF00109 Beta-ketoacyl synthase, N-terminal domain TC41_RS12450 PF00248 Aldo/keto reductase family TC41_RS12460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TC41_RS12460 PF00672 HAMP domain TC41_RS12460 PF02743 Cache domain TC41_RS12470 PF01842 ACT domain TC41_RS12470 PF00551 Formyl transferase TC41_RS12485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TC41_RS12490 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TC41_RS12490 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TC41_RS12495 PF01507 Phosphoadenosine phosphosulfate reductase family TC41_RS12500 PF10414 Sirohaem synthase dimerisation region TC41_RS12500 PF14824 Sirohaem biosynthesis protein central TC41_RS12500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TC41_RS12510 PF00535 Glycosyl transferase family 2 TC41_RS12515 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase TC41_RS12520 PF00483 Nucleotidyl transferase TC41_RS12525 PF07690 Major Facilitator Superfamily TC41_RS12535 PF00905 Penicillin binding protein transpeptidase domain TC41_RS12535 PF03717 Penicillin-binding Protein dimerisation domain TC41_RS12540 PF00535 Glycosyl transferase family 2 TC41_RS12545 PF08239 Bacterial SH3 domain TC41_RS12545 PF01476 LysM domain TC41_RS12545 PF00877 NlpC/P60 family TC41_RS12550 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) TC41_RS12560 PF03845 Spore germination protein TC41_RS12570 PF05504 Spore germination B3/ GerAC like, C-terminal TC41_RS12575 PF03323 Bacillus/Clostridium GerA spore germination protein TC41_RS12580 PF13180 PDZ domain TC41_RS12600 PF13243 Squalene-hopene cyclase C-terminal domain TC41_RS12600 PF13249 Squalene-hopene cyclase N-terminal domain TC41_RS12605 PF01370 NAD dependent epimerase/dehydratase family TC41_RS12615 PF04055 Radical SAM superfamily TC41_RS12615 PF06463 Molybdenum Cofactor Synthesis C TC41_RS12620 PF01070 FMN-dependent dehydrogenase TC41_RS12625 PF02780 Transketolase, C-terminal domain TC41_RS12625 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TC41_RS12625 PF02779 Transketolase, pyrimidine binding domain TC41_RS12645 PF00501 AMP-binding enzyme TC41_RS12645 PF01553 Acyltransferase TC41_RS12660 PF07731 Multicopper oxidase TC41_RS12660 PF07732 Multicopper oxidase TC41_RS12660 PF00394 Multicopper oxidase TC41_RS12665 PF07732 Multicopper oxidase TC41_RS12665 PF07731 Multicopper oxidase TC41_RS12670 PF00295 Glycosyl hydrolases family 28 TC41_RS12675 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS12680 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS12695 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TC41_RS12695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TC41_RS12700 PF00356 Bacterial regulatory proteins, lacI family TC41_RS12705 PF01613 Flavin reductase like domain TC41_RS12720 PF03951 Glutamine synthetase, beta-Grasp domain TC41_RS12720 PF00120 Glutamine synthetase, catalytic domain TC41_RS12725 PF00909 Ammonium Transporter Family TC41_RS12730 PF13419 Haloacid dehalogenase-like hydrolase TC41_RS12735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TC41_RS12735 PF00005 ABC transporter TC41_RS12740 PF00005 ABC transporter TC41_RS12740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TC41_RS12745 PF12911 N-terminal TM domain of oligopeptide transport permease C TC41_RS12745 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS12750 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS12755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TC41_RS12760 PF00759 Glycosyl hydrolase family 9 TC41_RS12760 PF02927 Cellulase N-terminal ig-like domain TC41_RS12765 PF02445 Quinolinate synthetase A protein TC41_RS12770 PF02910 Fumarate reductase flavoprotein C-term TC41_RS12770 PF00890 FAD binding domain TC41_RS12775 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TC41_RS12775 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TC41_RS12785 PF00899 ThiF family TC41_RS12790 PF05690 Thiazole biosynthesis protein ThiG TC41_RS12800 PF01266 FAD dependent oxidoreductase TC41_RS12805 PF02581 Thiamine monophosphate synthase TC41_RS12810 PF02833 DHHA2 domain TC41_RS12810 PF01368 DHH family TC41_RS12820 PF07690 Major Facilitator Superfamily TC41_RS12835 PF13171 Protein of unknown function (DUF4004) TC41_RS12840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TC41_RS12845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TC41_RS12855 PF01370 NAD dependent epimerase/dehydratase family TC41_RS12855 PF08338 Domain of unknown function (DUF1731) TC41_RS12860 PF07690 Major Facilitator Superfamily TC41_RS12910 PF01965 DJ-1/PfpI family TC41_RS12920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TC41_RS12925 PF13520 Amino acid permease TC41_RS12935 PF00171 Aldehyde dehydrogenase family TC41_RS12955 PF00535 Glycosyl transferase family 2 TC41_RS12955 PF13181 Tetratricopeptide repeat TC41_RS12965 PF03466 LysR substrate binding domain TC41_RS12965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TC41_RS12970 PF00753 Metallo-beta-lactamase superfamily TC41_RS12970 PF16123 Hydroxyacylglutathione hydrolase C-terminus TC41_RS12975 PF07690 Major Facilitator Superfamily TC41_RS12985 PF00107 Zinc-binding dehydrogenase TC41_RS12985 PF08240 Alcohol dehydrogenase GroES-like domain TC41_RS12990 PF07992 Pyridine nucleotide-disulphide oxidoreductase TC41_RS12990 PF13192 Thioredoxin domain TC41_RS12995 PF00578 AhpC/TSA family TC41_RS13000 PF01475 Ferric uptake regulator family TC41_RS13005 PF13193 AMP-binding enzyme C-terminal domain TC41_RS13005 PF00501 AMP-binding enzyme TC41_RS13010 PF00324 Amino acid permease TC41_RS13015 PF01619 Proline dehydrogenase TC41_RS13020 PF00158 Sigma-54 interaction domain TC41_RS13020 PF02954 Bacterial regulatory protein, Fis family TC41_RS13025 PF02913 FAD linked oxidases, C-terminal domain TC41_RS13025 PF01565 FAD binding domain TC41_RS13030 PF07690 Major Facilitator Superfamily TC41_RS13035 PF12146 Serine aminopeptidase, S33 TC41_RS13040 PF02652 L-lactate permease TC41_RS13045 PF01274 Malate synthase TC41_RS13050 PF09339 IclR helix-turn-helix domain TC41_RS13050 PF01614 Bacterial transcriptional regulator TC41_RS13055 PF02913 FAD linked oxidases, C-terminal domain TC41_RS13055 PF01565 FAD binding domain TC41_RS13060 PF02754 Cysteine-rich domain TC41_RS13060 PF13183 4Fe-4S dicluster domain TC41_RS13065 PF01565 FAD binding domain TC41_RS13065 PF02913 FAD linked oxidases, C-terminal domain TC41_RS13110 PF04199 Putative cyclase TC41_RS13115 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain TC41_RS13115 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain TC41_RS13120 PF00472 RF-1 domain TC41_RS13120 PF03462 PCRF domain TC41_RS13130 PF07516 SecA Wing and Scaffold domain TC41_RS13130 PF02810 SEC-C motif TC41_RS13130 PF07517 SecA DEAD-like domain TC41_RS13130 PF01043 SecA preprotein cross-linking domain TC41_RS13140 PF13439 Glycosyltransferase Family 4 TC41_RS13140 PF00534 Glycosyl transferases group 1 TC41_RS13145 PF00534 Glycosyl transferases group 1 TC41_RS13150 PF08241 Methyltransferase domain TC41_RS13155 PF13181 Tetratricopeptide repeat TC41_RS13155 PF00535 Glycosyl transferase family 2 TC41_RS13170 PF07196 Flagellin hook IN motif TC41_RS13170 PF00669 Bacterial flagellin N-terminal helical region TC41_RS13170 PF00700 Bacterial flagellin C-terminal helical region TC41_RS13205 PF00156 Phosphoribosyl transferase domain TC41_RS13210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS13210 PF16736 Single Cache-like TC41_RS13210 PF00512 His Kinase A (phospho-acceptor) domain TC41_RS13210 PF00989 PAS fold TC41_RS13215 PF00072 Response regulator receiver domain TC41_RS13215 PF00486 Transcriptional regulatory protein, C terminal TC41_RS13230 PF00196 Bacterial regulatory proteins, luxR family TC41_RS13230 PF00072 Response regulator receiver domain TC41_RS13235 PF02773 S-adenosylmethionine synthetase, C-terminal domain TC41_RS13235 PF02772 S-adenosylmethionine synthetase, central domain TC41_RS13235 PF00438 S-adenosylmethionine synthetase, N-terminal domain TC41_RS13240 PF03808 Glycosyl transferase WecB/TagA/CpsF family TC41_RS13245 PF07690 Major Facilitator Superfamily TC41_RS13250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TC41_RS13250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TC41_RS13250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TC41_RS13250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TC41_RS13255 PF01738 Dienelactone hydrolase family TC41_RS13260 PF00994 Probable molybdopterin binding domain TC41_RS13265 PF14748 Pyrroline-5-carboxylate reductase dimerisation TC41_RS13265 PF03807 NADP oxidoreductase coenzyme F420-dependent TC41_RS13270 PF12146 Serine aminopeptidase, S33 TC41_RS13325 PF02567 Phenazine biosynthesis-like protein TC41_RS13330 PF03109 ABC1 family TC41_RS13340 PF00849 RNA pseudouridylate synthase TC41_RS13340 PF01479 S4 domain TC41_RS13360 PF02424 ApbE family TC41_RS13370 PF00356 Bacterial regulatory proteins, lacI family TC41_RS13375 PF00248 Aldo/keto reductase family TC41_RS13380 PF02683 Cytochrome C biogenesis protein transmembrane region TC41_RS13395 PF13472 GDSL-like Lipase/Acylhydrolase family TC41_RS13405 PF02424 ApbE family TC41_RS13425 PF07690 Major Facilitator Superfamily TC41_RS13430 PF02569 Pantoate-beta-alanine ligase TC41_RS13435 PF02548 Ketopantoate hydroxymethyltransferase TC41_RS13450 PF07690 Major Facilitator Superfamily TC41_RS13460 PF01475 Ferric uptake regulator family TC41_RS13465 PF01297 Zinc-uptake complex component A periplasmic TC41_RS13470 PF00005 ABC transporter TC41_RS13475 PF00950 ABC 3 transport family TC41_RS13485 PF03061 Thioesterase superfamily TC41_RS13490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TC41_RS13490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TC41_RS13500 PF03707 Bacterial signalling protein N terminal repeat TC41_RS13500 PF00990 Diguanylate cyclase, GGDEF domain TC41_RS13500 PF00563 EAL domain TC41_RS13505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TC41_RS13505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TC41_RS13510 PF07690 Major Facilitator Superfamily TC41_RS13525 PF05425 Copper resistance protein D TC41_RS13525 PF04234 CopC domain TC41_RS13525 PF13115 YtkA-like TC41_RS13530 PF07987 Domain of unkown function (DUF1775) TC41_RS13535 PF01384 Phosphate transporter family TC41_RS13550 PF00480 ROK family TC41_RS13550 PF01047 MarR family TC41_RS13555 PF01915 Glycosyl hydrolase family 3 C-terminal domain TC41_RS13555 PF14310 Fibronectin type III-like domain TC41_RS13555 PF00933 Glycosyl hydrolase family 3 N terminal domain TC41_RS13560 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS13580 PF01569 PAP2 superfamily TC41_RS13595 PF04542 Sigma-70 region 2 TC41_RS13595 PF08281 Sigma-70, region 4 TC41_RS13620 PF02583 Metal-sensitive transcriptional repressor TC41_RS13625 PF01925 Sulfite exporter TauE/SafE TC41_RS13630 PF00753 Metallo-beta-lactamase superfamily TC41_RS13630 PF00581 Rhodanese-like domain TC41_RS13635 PF00581 Rhodanese-like domain TC41_RS13635 PF01206 Sulfurtransferase TusA TC41_RS13640 PF13686 DsrE/DsrF/DrsH-like family TC41_RS13645 PF00581 Rhodanese-like domain TC41_RS13650 PF01925 Sulfite exporter TauE/SafE TC41_RS13675 PF09827 CRISPR associated protein Cas2 TC41_RS13680 PF01867 CRISPR associated protein Cas1 TC41_RS13690 PF00239 Resolvase, N terminal domain TC41_RS13695 PF07282 Putative transposase DNA-binding domain TC41_RS13695 PF01385 Probable transposase TC41_RS13695 PF12323 Helix-turn-helix domain TC41_RS13705 PF13667 ThiC-associated domain TC41_RS13705 PF01964 Radical SAM ThiC family TC41_RS13720 PF02086 D12 class N6 adenine-specific DNA methyltransferase TC41_RS13725 PF00403 Heavy-metal-associated domain TC41_RS13730 PF02583 Metal-sensitive transcriptional repressor TC41_RS13735 PF03780 Asp23 family, cell envelope-related function TC41_RS13750 PF03780 Asp23 family, cell envelope-related function TC41_RS13755 PF01037 Lrp/AsnC ligand binding domain TC41_RS13760 PF00155 Aminotransferase class I and II TC41_RS13765 PF07690 Major Facilitator Superfamily TC41_RS13770 PF08240 Alcohol dehydrogenase GroES-like domain TC41_RS13770 PF00107 Zinc-binding dehydrogenase TC41_RS13775 PF00440 Bacterial regulatory proteins, tetR family TC41_RS13780 PF00202 Aminotransferase class-III TC41_RS13790 PF13817 IS66 C-terminal element TC41_RS13790 PF03050 Transposase IS66 family TC41_RS13790 PF13007 Transposase C of IS166 homeodomain TC41_RS13790 PF13005 zinc-finger binding domain of transposase IS66 TC41_RS13805 PF01180 Dihydroorotate dehydrogenase TC41_RS13810 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TC41_RS13810 PF07992 Pyridine nucleotide-disulphide oxidoreductase TC41_RS13825 PF03050 Transposase IS66 family TC41_RS13825 PF13817 IS66 C-terminal element TC41_RS13825 PF13005 zinc-finger binding domain of transposase IS66 TC41_RS13825 PF13007 Transposase C of IS166 homeodomain TC41_RS13860 PF00872 Transposase, Mutator family TC41_RS13875 PF01380 SIS domain TC41_RS13880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TC41_RS13880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TC41_RS13880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TC41_RS13880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TC41_RS13885 PF07949 YbbR-like protein TC41_RS13890 PF02457 DisA bacterial checkpoint controller nucleotide-binding TC41_RS13900 PF01522 Polysaccharide deacetylase TC41_RS13910 PF10609 NUBPL iron-transfer P-loop NTPase TC41_RS13920 PF01520 N-acetylmuramoyl-L-alanine amidase TC41_RS13925 PF00380 Ribosomal protein S9/S16 TC41_RS13930 PF00572 Ribosomal protein L13 TC41_RS13935 PF01416 tRNA pseudouridine synthase TC41_RS13940 PF01196 Ribosomal protein L17 TC41_RS13945 PF01000 RNA polymerase Rpb3/RpoA insert domain TC41_RS13945 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TC41_RS13945 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TC41_RS13950 PF01479 S4 domain TC41_RS13950 PF00163 Ribosomal protein S4/S9 N-terminal domain TC41_RS13955 PF00411 Ribosomal protein S11 TC41_RS13960 PF00416 Ribosomal protein S13/S18 TC41_RS13965 PF00444 Ribosomal protein L36 TC41_RS13970 PF01176 Translation initiation factor 1A / IF-1 TC41_RS13980 PF05191 Adenylate kinase, active site lid TC41_RS13985 PF00344 SecY translocase TC41_RS13990 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TC41_RS13995 PF00327 Ribosomal protein L30p/L7e TC41_RS14000 PF03719 Ribosomal protein S5, C-terminal domain TC41_RS14000 PF00333 Ribosomal protein S5, N-terminal domain TC41_RS14005 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TC41_RS14010 PF00347 Ribosomal protein L6 TC41_RS14015 PF00410 Ribosomal protein S8 TC41_RS14020 PF00253 Ribosomal protein S14p/S29e TC41_RS14025 PF00673 ribosomal L5P family C-terminus TC41_RS14025 PF00281 Ribosomal protein L5 TC41_RS14030 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TC41_RS14030 PF00467 KOW motif TC41_RS14035 PF00238 Ribosomal protein L14p/L23e TC41_RS14040 PF00366 Ribosomal protein S17 TC41_RS14045 PF00831 Ribosomal L29 protein TC41_RS14050 PF00252 Ribosomal protein L16p/L10e TC41_RS14055 PF00189 Ribosomal protein S3, C-terminal domain TC41_RS14055 PF07650 KH domain TC41_RS14060 PF00237 Ribosomal protein L22p/L17e TC41_RS14065 PF00203 Ribosomal protein S19 TC41_RS14070 PF03947 Ribosomal Proteins L2, C-terminal domain TC41_RS14070 PF00181 Ribosomal Proteins L2, RNA binding domain TC41_RS14075 PF00276 Ribosomal protein L23 TC41_RS14080 PF00573 Ribosomal protein L4/L1 family TC41_RS14085 PF00297 Ribosomal protein L3 TC41_RS14090 PF00338 Ribosomal protein S10p/S20e TC41_RS14095 PF00009 Elongation factor Tu GTP binding domain TC41_RS14095 PF03143 Elongation factor Tu C-terminal domain TC41_RS14095 PF03144 Elongation factor Tu domain 2 TC41_RS14100 PF00679 Elongation factor G C-terminus TC41_RS14100 PF14492 Elongation Factor G, domain II TC41_RS14100 PF00009 Elongation factor Tu GTP binding domain TC41_RS14100 PF03764 Elongation factor G, domain IV TC41_RS14100 PF03144 Elongation factor Tu domain 2 TC41_RS14105 PF00177 Ribosomal protein S7p/S5e TC41_RS14110 PF00164 Ribosomal protein S12/S23 TC41_RS14115 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TC41_RS14120 PF05000 RNA polymerase Rpb1, domain 4 TC41_RS14120 PF04983 RNA polymerase Rpb1, domain 3 TC41_RS14120 PF00623 RNA polymerase Rpb1, domain 2 TC41_RS14120 PF04997 RNA polymerase Rpb1, domain 1 TC41_RS14120 PF04998 RNA polymerase Rpb1, domain 5 TC41_RS14125 PF04560 RNA polymerase Rpb2, domain 7 TC41_RS14125 PF10385 RNA polymerase beta subunit external 1 domain TC41_RS14125 PF04565 RNA polymerase Rpb2, domain 3 TC41_RS14125 PF04563 RNA polymerase beta subunit TC41_RS14125 PF00562 RNA polymerase Rpb2, domain 6 TC41_RS14125 PF04561 RNA polymerase Rpb2, domain 2 TC41_RS14130 PF05175 Methyltransferase small domain TC41_RS14135 PF00542 Ribosomal protein L7/L12 C-terminal domain TC41_RS14135 PF16320 Ribosomal protein L7/L12 dimerisation domain TC41_RS14140 PF00466 Ribosomal protein L10 TC41_RS14145 PF00687 Ribosomal protein L1p/L10e family TC41_RS14150 PF00298 Ribosomal protein L11, RNA binding domain TC41_RS14150 PF03946 Ribosomal protein L11, N-terminal domain TC41_RS14155 PF00467 KOW motif TC41_RS14155 PF02357 Transcription termination factor nusG TC41_RS14165 PF00471 Ribosomal protein L33 TC41_RS14170 PF04542 Sigma-70 region 2 TC41_RS14170 PF08281 Sigma-70, region 4 TC41_RS14180 PF00588 SpoU rRNA Methylase family TC41_RS14180 PF08032 RNA 2'-O ribose methyltransferase substrate binding TC41_RS14185 PF00636 Ribonuclease III domain TC41_RS14190 PF01406 tRNA synthetases class I (C) catalytic domain TC41_RS14190 PF09190 DALR domain TC41_RS14195 PF00749 tRNA synthetases class I (E and Q), catalytic domain TC41_RS14200 PF02542 YgbB family TC41_RS14205 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TC41_RS14215 PF01066 CDP-alcohol phosphatidyltransferase TC41_RS14220 PF10635 DisA bacterial checkpoint controller linker region TC41_RS14220 PF02457 DisA bacterial checkpoint controller nucleotide-binding TC41_RS14225 PF18073 Rubredoxin metal binding domain TC41_RS14230 PF17871 AAA lid domain TC41_RS14230 PF00004 ATPase family associated with various cellular activities (AAA) TC41_RS14230 PF02861 Clp amino terminal domain, pathogenicity island component TC41_RS14230 PF07724 AAA domain (Cdc48 subfamily) TC41_RS14230 PF10431 C-terminal, D2-small domain, of ClpB protein TC41_RS14240 PF02151 UvrB/uvrC motif TC41_RS14245 PF05848 CtsR N-terminal HTH domain TC41_RS14245 PF17727 CtsR C-terminal dimerization domain TC41_RS14255 PF01695 IstB-like ATP binding protein TC41_RS14265 PF07977 FabA-like domain TC41_RS14270 PF01066 CDP-alcohol phosphatidyltransferase TC41_RS14275 PF00460 Flagella basal body rod protein TC41_RS14275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TC41_RS14280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TC41_RS14280 PF00460 Flagella basal body rod protein TC41_RS14290 PF12116 Stage III sporulation protein D TC41_RS14295 PF01551 Peptidase family M23 TC41_RS14305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TC41_RS14320 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain TC41_RS14320 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TC41_RS14325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TC41_RS14325 PF02874 ATP synthase alpha/beta family, beta-barrel domain TC41_RS14330 PF00231 ATP synthase TC41_RS14335 PF00306 ATP synthase alpha/beta chain, C terminal domain TC41_RS14335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TC41_RS14335 PF02874 ATP synthase alpha/beta family, beta-barrel domain TC41_RS14340 PF00213 ATP synthase delta (OSCP) subunit TC41_RS14345 PF00430 ATP synthase B/B' CF(0) TC41_RS14350 PF00137 ATP synthase subunit C TC41_RS14355 PF00119 ATP synthase A chain TC41_RS14370 PF02350 UDP-N-acetylglucosamine 2-epimerase TC41_RS14380 PF00464 Serine hydroxymethyltransferase TC41_RS14385 PF04260 Protein of unknown function (DUF436) TC41_RS14390 PF01451 Low molecular weight phosphotyrosine protein phosphatase TC41_RS14395 PF02659 Putative manganese efflux pump TC41_RS14405 PF06912 Protein of unknown function (DUF1275) TC41_RS14420 PF03481 Putative GTP-binding controlling metal-binding TC41_RS14420 PF01300 Telomere recombination TC41_RS14425 PF09551 Stage II sporulation protein R (spore_II_R) TC41_RS14430 PF05175 Methyltransferase small domain TC41_RS14430 PF17827 PrmC N-terminal domain TC41_RS14435 PF00472 RF-1 domain TC41_RS14435 PF03462 PCRF domain TC41_RS14440 PF01197 Ribosomal protein L31 TC41_RS14450 PF07497 Rho termination factor, RNA-binding domain TC41_RS14450 PF07498 Rho termination factor, N-terminal domain TC41_RS14450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TC41_RS14455 PF00923 Transaldolase/Fructose-6-phosphate aldolase TC41_RS14460 PF00072 Response regulator receiver domain TC41_RS14465 PF06418 CTP synthase N-terminus TC41_RS14465 PF00117 Glutamine amidotransferase class-I TC41_RS14470 PF05066 HB1, ASXL, restriction endonuclease HTH domain TC41_RS14475 PF00378 Enoyl-CoA hydratase/isomerase TC41_RS14480 PF03746 LamB/YcsF family TC41_RS14485 PF02626 Carboxyltransferase domain, subdomain A and B TC41_RS14490 PF02682 Carboxyltransferase domain, subdomain C and D TC41_RS14495 PF00535 Glycosyl transferase family 2 TC41_RS14505 PF00491 Arginase family TC41_RS14510 PF17284 Spermidine synthase tetramerisation domain TC41_RS14515 PF02770 Acyl-CoA dehydrogenase, middle domain TC41_RS14515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TC41_RS14515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TC41_RS14520 PF00550 Phosphopantetheine attachment site TC41_RS14520 PF14765 Polyketide synthase dehydratase TC41_RS14520 PF00109 Beta-ketoacyl synthase, N-terminal domain TC41_RS14520 PF08240 Alcohol dehydrogenase GroES-like domain TC41_RS14520 PF08659 KR domain TC41_RS14520 PF02801 Beta-ketoacyl synthase, C-terminal domain TC41_RS14520 PF16197 Ketoacyl-synthetase C-terminal extension TC41_RS14520 PF00107 Zinc-binding dehydrogenase TC41_RS14520 PF00698 Acyl transferase domain TC41_RS14525 PF00912 Transglycosylase TC41_RS14525 PF00905 Penicillin binding protein transpeptidase domain TC41_RS14530 PF00155 Aminotransferase class I and II TC41_RS14560 PF04055 Radical SAM superfamily TC41_RS14560 PF06463 Molybdenum Cofactor Synthesis C TC41_RS14565 PF02142 MGS-like domain TC41_RS14595 PF07690 Major Facilitator Superfamily TC41_RS14600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TC41_RS14600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TC41_RS14610 PF01053 Cys/Met metabolism PLP-dependent enzyme TC41_RS14620 PF01053 Cys/Met metabolism PLP-dependent enzyme TC41_RS14630 PF01494 FAD binding domain TC41_RS14640 PF01227 GTP cyclohydrolase I TC41_RS14645 PF00348 Polyprenyl synthetase TC41_RS14655 PF01593 Flavin containing amine oxidoreductase TC41_RS14660 PF00067 Cytochrome P450 TC41_RS14670 PF02660 Glycerol-3-phosphate acyltransferase TC41_RS14690 PF12867 DinB superfamily TC41_RS14715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TC41_RS14715 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TC41_RS14720 PF01048 Phosphorylase superfamily TC41_RS14725 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal TC41_RS14725 PF14602 Hexapeptide repeat of succinyl-transferase TC41_RS14725 PF00132 Bacterial transferase hexapeptide (six repeats) TC41_RS14730 PF01546 Peptidase family M20/M25/M40 TC41_RS14730 PF07687 Peptidase dimerisation domain TC41_RS14735 PF00155 Aminotransferase class I and II TC41_RS14755 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TC41_RS14755 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TC41_RS14765 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS14770 PF13411 MerR HTH family regulatory protein TC41_RS14775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TC41_RS14775 PF02770 Acyl-CoA dehydrogenase, middle domain TC41_RS14775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TC41_RS14780 PF13193 AMP-binding enzyme C-terminal domain TC41_RS14780 PF00501 AMP-binding enzyme TC41_RS14785 PF06968 Biotin and Thiamin Synthesis associated domain TC41_RS14785 PF04055 Radical SAM superfamily TC41_RS14790 PF01494 FAD binding domain TC41_RS14795 PF03649 Uncharacterised protein family (UPF0014) TC41_RS14800 PF00005 ABC transporter TC41_RS14805 PF16884 N-terminal domain of oxidoreductase TC41_RS14805 PF00107 Zinc-binding dehydrogenase TC41_RS14825 PF08546 Ketopantoate reductase PanE/ApbA C terminal TC41_RS14825 PF02558 Ketopantoate reductase PanE/ApbA TC41_RS14835 PF00990 Diguanylate cyclase, GGDEF domain TC41_RS14840 PF13802 Galactose mutarotase-like TC41_RS14840 PF16338 Domain of unknown function (DUF4968) TC41_RS14840 PF01055 Glycosyl hydrolases family 31 TC41_RS14840 PF17137 Domain of unknown function (DUF5110) TC41_RS14850 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family TC41_RS14850 PF00356 Bacterial regulatory proteins, lacI family TC41_RS14855 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS14860 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS14865 PF01547 Bacterial extracellular solute-binding protein TC41_RS14870 PF00128 Alpha amylase, catalytic domain TC41_RS14870 PF02903 Alpha amylase, N-terminal ig-like domain TC41_RS14875 PF07859 alpha/beta hydrolase fold TC41_RS14880 PF02678 Pirin TC41_RS14880 PF05726 Pirin C-terminal cupin domain TC41_RS14885 PF00293 NUDIX domain TC41_RS14900 PF07690 Major Facilitator Superfamily TC41_RS14910 PF00239 Resolvase, N terminal domain TC41_RS14915 PF12323 Helix-turn-helix domain TC41_RS14915 PF07282 Putative transposase DNA-binding domain TC41_RS14915 PF01385 Probable transposase TC41_RS14935 PF18019 HD domain TC41_RS14960 PF00171 Aldehyde dehydrogenase family TC41_RS14965 PF01472 PUA domain TC41_RS14965 PF00696 Amino acid kinase family TC41_RS14970 PF01557 Fumarylacetoacetate (FAA) hydrolase family TC41_RS14975 PF01055 Glycosyl hydrolases family 31 TC41_RS14975 PF13802 Galactose mutarotase-like TC41_RS14980 PF00582 Universal stress protein family TC41_RS14985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TC41_RS14995 PF10114 Sensory domain found in PocR TC41_RS14995 PF12833 Helix-turn-helix domain TC41_RS15000 PF02449 Beta-galactosidase TC41_RS15000 PF08532 Beta-galactosidase trimerisation domain TC41_RS15000 PF08533 Beta-galactosidase C-terminal domain TC41_RS15005 PF00909 Ammonium Transporter Family TC41_RS15010 PF00543 Nitrogen regulatory protein P-II TC41_RS15035 PF06964 Alpha-L-arabinofuranosidase C-terminal domain TC41_RS15040 PF00528 Binding-protein-dependent transport system inner membrane component TC41_RS15060 PF13685 Iron-containing alcohol dehydrogenase TC41_RS15065 PF02610 L-arabinose isomerase TC41_RS15065 PF11762 L-arabinose isomerase C-terminal domain TC41_RS15070 PF00596 Class II Aldolase and Adducin N-terminal domain TC41_RS15075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TC41_RS15075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TC41_RS15080 PF00083 Sugar (and other) transporter TC41_RS15085 PF00392 Bacterial regulatory proteins, gntR family TC41_RS15095 PF07944 Beta-L-arabinofuranosidase, GH127 TC41_RS15105 PF07690 Major Facilitator Superfamily TC41_RS15115 PF01556 DnaJ C terminal domain TC41_RS15115 PF00684 DnaJ central domain TC41_RS15115 PF00226 DnaJ domain TC41_RS15120 PF00106 short chain dehydrogenase TC41_RS15125 PF00990 Diguanylate cyclase, GGDEF domain TC41_RS15125 PF03707 Bacterial signalling protein N terminal repeat TC41_RS15125 PF13188 PAS domain TC41_RS15125 PF00563 EAL domain TC41_RS15135 PF03466 LysR substrate binding domain TC41_RS15135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TC41_RS15140 PF02590 Predicted SPOUT methyltransferase TC41_RS15145 PF13180 PDZ domain TC41_RS15150 PF00753 Metallo-beta-lactamase superfamily TC41_RS15165 PF00672 HAMP domain TC41_RS15165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TC41_RS15165 PF00512 His Kinase A (phospho-acceptor) domain TC41_RS15165 PF13426 PAS domain TC41_RS15170 PF00072 Response regulator receiver domain TC41_RS15170 PF00486 Transcriptional regulatory protein, C terminal TC41_RS15180 PF00772 DnaB-like helicase N terminal domain TC41_RS15180 PF03796 DnaB-like helicase C terminal domain TC41_RS15185 PF03948 Ribosomal protein L9, C-terminal domain TC41_RS15185 PF01281 Ribosomal protein L9, N-terminal domain TC41_RS15195 PF01084 Ribosomal protein S18 TC41_RS15200 PF00436 Single-strand binding protein family TC41_RS15205 PF01250 Ribosomal protein S6 TC41_RS15210 PF06071 Protein of unknown function (DUF933) TC41_RS15210 PF01926 50S ribosome-binding GTPase TC41_RS15215 PF01568 Molydopterin dinucleotide binding domain TC41_RS15215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TC41_RS15215 PF00384 Molybdopterin oxidoreductase TC41_RS15220 PF06107 Bacterial protein of unknown function (DUF951) TC41_RS15225 PF00924 Mechanosensitive ion channel TC41_RS15235 PF06866 Protein of unknown function (DUF1256) TC41_RS15245 PF04474 Protein of unknown function (DUF554) TC41_RS15250 PF02195 ParB-like nuclease domain TC41_RS15250 PF17762 HTH domain found in ParB protein TC41_RS15255 PF13614 AAA domain TC41_RS15260 PF17762 HTH domain found in ParB protein TC41_RS15260 PF02195 ParB-like nuclease domain TC41_RS15265 PF02527 rRNA small subunit methyltransferase G TC41_RS15270 PF01134 Glucose inhibited division protein A TC41_RS15270 PF13932 GidA associated domain TC41_RS15275 PF01926 50S ribosome-binding GTPase TC41_RS15275 PF12631 MnmE helical domain TC41_RS15275 PF10396 GTP-binding protein TrmE N-terminus TC41_RS15280 PF14804 Jag N-terminus TC41_RS15280 PF01424 R3H domain TC41_RS15285 PF02096 60Kd inner membrane protein TC41_RS15290 PF01809 Putative membrane protein insertion efficiency factor TC41_RS15295 PF00825 Ribonuclease P TC41_RS15300 PF00468 Ribosomal protein L34 TC41_RS15340 PF00005 ABC transporter TC41_RS15345 PF00005 ABC transporter TC41_RS15350 PF00596 Class II Aldolase and Adducin N-terminal domain TC41_RS15355 PF17876 Cold shock domain TC41_RS15355 PF00773 RNB domain TC41_RS15355 PF08206 Ribonuclease B OB domain TC41_RS15355 PF00575 S1 RNA binding domain TC41_RS15360 PF01969 Protein of unknown function DUF111 TC41_RS15365 PF01969 Protein of unknown function DUF111 TC41_RS15375 PF07559 Flagellar basal body protein FlaE TC41_RS15375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TC41_RS15375 PF00460 Flagella basal body rod protein TC41_RS15385 PF00072 Response regulator receiver domain TC41_RS15470 PF00356 Bacterial regulatory proteins, lacI family TC41_RS15475 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family TC41_RS15475 PF00356 Bacterial regulatory proteins, lacI family TC41_RS15480 PF01810 LysE type translocator TC41_RS15485 PF00005 ABC transporter