TC41_RS00005	SM00382	ATPases associated with a variety of cellular activities
TC41_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
TC41_RS00010	SM00480	DNA polymerase III beta subunit
TC41_RS00025	SM00387	Histidine kinase-like ATPases
TC41_RS00025	SM00433	TopoisomeraseII
TC41_RS00030	SM00434	DNA Topoisomerase IV
TC41_RS00065	SM00116	Domain in cystathionine beta-synthase and other proteins.
TC41_RS00065	SM01240	TC41_RS00065
TC41_RS00145	SM00984	UDP binding domain
TC41_RS00165	SM00857	Resolvase, N terminal domain
TC41_RS00205	SM00849	Metallo-beta-lactamase superfamily
TC41_RS00220	SM00382	ATPases associated with a variety of cellular activities
TC41_RS00240	SM00382	ATPases associated with a variety of cellular activities
TC41_RS00255	SM00342	helix_turn_helix, arabinose operon control protein
TC41_RS00260	SM00448	cheY-homologous receiver domain
TC41_RS00260	SM00862	Transcriptional regulatory protein, C terminal
TC41_RS00265	SM00387	Histidine kinase-like ATPases
TC41_RS00265	SM00388	His Kinase A (phosphoacceptor) domain
TC41_RS00285	SM00354	helix_turn _helix lactose operon repressor
TC41_RS00300	SM00422	helix_turn_helix, mercury resistance
TC41_RS00330	SM00944	Pro-kumamolisin, activation domain
TC41_RS00335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
TC41_RS00335	SM00895	TC41_RS00335
TC41_RS00340	SM00822	TC41_RS00340
TC41_RS00365	SM00091	PAS domain
TC41_RS00365	SM00387	Histidine kinase-like ATPases
TC41_RS00365	SM00388	His Kinase A (phosphoacceptor) domain
TC41_RS00385	SM00072	Guanylate kinase homologues.
TC41_RS00390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TC41_RS00390	SM00387	Histidine kinase-like ATPases
TC41_RS00390	SM00388	His Kinase A (phosphoacceptor) domain
TC41_RS00395	SM00460	Transglutaminase/protease-like homologues
TC41_RS00420	SM00155	Phospholipase D. Active site motifs.
TC41_RS00475	SM00855	Phosphoglycerate mutase family
TC41_RS00550	SM01007	Class II Aldolase and Adducin N-terminal domain
TC41_RS00580	SM00387	Histidine kinase-like ATPases
TC41_RS00580	SM00388	His Kinase A (phosphoacceptor) domain
TC41_RS00590	SM00382	ATPases associated with a variety of cellular activities
TC41_RS00600	SM00493	TC41_RS00600
TC41_RS00620	SM01007	Class II Aldolase and Adducin N-terminal domain
TC41_RS00625	SM00450	Rhodanese Homology Domain
TC41_RS00625	SM00849	Metallo-beta-lactamase superfamily
TC41_RS00635	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TC41_RS00635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TC41_RS00640	SM00448	cheY-homologous receiver domain
TC41_RS00650	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TC41_RS00655	SM00073	Histidine Phosphotransfer domain
TC41_RS00655	SM00260	Two component signalling adaptor domain
TC41_RS00655	SM00387	Histidine kinase-like ATPases
TC41_RS00655	SM01231	TC41_RS00655
TC41_RS00660	SM00260	Two component signalling adaptor domain
TC41_RS00745	SM00966	SpoVT / AbrB like domain 
TC41_RS00765	SM00650	Ribosomal RNA adenine dimethylases
TC41_RS00810	SM00919	Malic enzyme, NAD binding domain
TC41_RS00810	SM01274	TC41_RS00810
TC41_RS00890	SM00822	TC41_RS00890
TC41_RS00895	SM00822	TC41_RS00895
TC41_RS00920	SM00346	helix_turn_helix isocitrate lyase regulation
TC41_RS00960	SM00382	ATPases associated with a variety of cellular activities
TC41_RS01075	SM01400	TC41_RS01075
TC41_RS01090	SM00487	DEAD-like helicases superfamily
TC41_RS01090	SM00490	helicase superfamily c-terminal domain
TC41_RS01090	SM00982	TC41_RS01090
TC41_RS01090	SM01058	CarD-like/TRCF domain
TC41_RS01110	SM00411	bacterial (prokaryotic) histone like domain
TC41_RS01115	SM00363	S4 RNA-binding domain
TC41_RS01135	SM00316	Ribosomal protein S1-like RNA-binding domain
TC41_RS01150	SM00331	Sigma factor PP2C-like phosphatases
TC41_RS01160	SM00220	Serine/Threonine protein kinases, catalytic domain
TC41_RS01165	SM00977	TilS substrate C-terminal domain
TC41_RS01175	SM00382	ATPases associated with a variety of cellular activities
TC41_RS01185	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TC41_RS01205	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS01280	SM00829	Enoylreductase
TC41_RS01355	SM00382	ATPases associated with a variety of cellular activities
TC41_RS01360	SM00382	ATPases associated with a variety of cellular activities
TC41_RS01370	SM00052	Putative diguanylate phosphodiesterase
TC41_RS01370	SM00267	diguanylate cyclase
TC41_RS01380	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TC41_RS01380	SM00450	Rhodanese Homology Domain
TC41_RS01440	SM00944	Pro-kumamolisin, activation domain
TC41_RS01445	SM00448	cheY-homologous receiver domain
TC41_RS01445	SM00862	Transcriptional regulatory protein, C terminal
TC41_RS01450	SM00387	Histidine kinase-like ATPases
TC41_RS01450	SM00388	His Kinase A (phosphoacceptor) domain
TC41_RS01495	SM00257	Lysin motif
TC41_RS01495	SM00636	TC41_RS01495
TC41_RS01505	SM00382	ATPases associated with a variety of cellular activities
TC41_RS01525	SM00917	LeuA allosteric (dimerisation) domain
TC41_RS01660	SM00028	Tetratricopeptide repeats
TC41_RS01680	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS01715	SM00382	ATPases associated with a variety of cellular activities
TC41_RS01780	SM00382	ATPases associated with a variety of cellular activities
TC41_RS01800	SM00382	ATPases associated with a variety of cellular activities
TC41_RS01895	SM00028	Tetratricopeptide repeats
TC41_RS01915	SM00382	ATPases associated with a variety of cellular activities
TC41_RS01975	SM00382	ATPases associated with a variety of cellular activities
TC41_RS01985	SM00857	Resolvase, N terminal domain
TC41_RS01995	SM00487	DEAD-like helicases superfamily
TC41_RS01995	SM00490	helicase superfamily c-terminal domain
TC41_RS02005	SM00091	PAS domain
TC41_RS02005	SM00382	ATPases associated with a variety of cellular activities
TC41_RS02025	SM00460	Transglutaminase/protease-like homologues
TC41_RS02055	SM00091	PAS domain
TC41_RS02055	SM00382	ATPases associated with a variety of cellular activities
TC41_RS02070	SM00382	ATPases associated with a variety of cellular activities
TC41_RS02075	SM00382	ATPases associated with a variety of cellular activities
TC41_RS02095	SM00047	Lysozyme subfamily 2
TC41_RS02100	SM00822	TC41_RS02100
TC41_RS02105	SM00342	helix_turn_helix, arabinose operon control protein
TC41_RS02120	SM01217	TC41_RS02120
TC41_RS02125	SM00903	Flavin reductase like domain
TC41_RS02135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
TC41_RS02135	SM00895	TC41_RS02135
TC41_RS02160	SM01130	TC41_RS02160
TC41_RS02200	SM00493	TC41_RS02200
TC41_RS02240	SM01005	Alanine racemase, C-terminal domain
TC41_RS02255	SM00996	S-adenosyl-L-homocysteine hydrolase
TC41_RS02255	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
TC41_RS02265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TC41_RS02265	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TC41_RS02315	SM00382	ATPases associated with a variety of cellular activities
TC41_RS02335	SM00852	Probable molybdopterin binding domain
TC41_RS02345	SM00883	Chaperonin 10 Kd subunit
TC41_RS02375	SM00091	PAS domain
TC41_RS02375	SM00387	Histidine kinase-like ATPases
TC41_RS02380	SM00421	helix_turn_helix, Lux Regulon
TC41_RS02380	SM00448	cheY-homologous receiver domain
TC41_RS02390	SM00382	ATPases associated with a variety of cellular activities
TC41_RS02400	SM00460	Transglutaminase/protease-like homologues
TC41_RS02405	SM00849	Metallo-beta-lactamase superfamily
TC41_RS02420	SM00998	Adenylosuccinate lyase C-terminus
TC41_RS02435	SM01211	TC41_RS02435
TC41_RS02455	SM00798	AICARFT/IMPCHase bienzyme
TC41_RS02455	SM00851	MGS-like domain
TC41_RS02460	SM01209	TC41_RS02460
TC41_RS02460	SM01210	TC41_RS02460
TC41_RS02485	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
TC41_RS02490	SM00382	ATPases associated with a variety of cellular activities
TC41_RS02515	SM00487	DEAD-like helicases superfamily
TC41_RS02515	SM00490	helicase superfamily c-terminal domain
TC41_RS02520	SM00382	ATPases associated with a variety of cellular activities
TC41_RS02530	SM00836	DALR anticodon binding domain
TC41_RS02530	SM01016	Arginyl tRNA synthetase N terminal dom
TC41_RS02535	SM00028	Tetratricopeptide repeats
TC41_RS02580	SM00478	endonuclease III
TC41_RS02580	SM00525	TC41_RS02580
TC41_RS02595	SM00345	helix_turn_helix gluconate operon transcriptional repressor
TC41_RS02595	SM00895	TC41_RS02595
TC41_RS02620	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
TC41_RS02625	SM00487	DEAD-like helicases superfamily
TC41_RS02625	SM00490	helicase superfamily c-terminal domain
TC41_RS02645	SM00478	endonuclease III
TC41_RS02645	SM00525	TC41_RS02645
TC41_RS02685	SM00091	PAS domain
TC41_RS02685	SM00382	ATPases associated with a variety of cellular activities
TC41_RS02700	SM00567	E-Z type HEAT repeats
TC41_RS02715	SM01329	TC41_RS02715
TC41_RS02720	SM00346	helix_turn_helix isocitrate lyase regulation
TC41_RS02745	SM00861	Transketolase, pyrimidine binding domain
TC41_RS02765	SM00763	PrkA AAA domain
TC41_RS02805	SM00052	Putative diguanylate phosphodiesterase
TC41_RS02845	SM00382	ATPases associated with a variety of cellular activities
TC41_RS02855	SM00382	ATPases associated with a variety of cellular activities
TC41_RS02860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
TC41_RS02865	SM00849	Metallo-beta-lactamase superfamily
TC41_RS02875	SM00347	helix_turn_helix multiple antibiotic resistance protein
TC41_RS02885	SM00382	ATPases associated with a variety of cellular activities
TC41_RS02900	SM00421	helix_turn_helix, Lux Regulon
TC41_RS02900	SM00448	cheY-homologous receiver domain
TC41_RS02985	SM00448	cheY-homologous receiver domain
TC41_RS02985	SM00862	Transcriptional regulatory protein, C terminal
TC41_RS02990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TC41_RS02990	SM00387	Histidine kinase-like ATPases
TC41_RS02990	SM00388	His Kinase A (phosphoacceptor) domain
TC41_RS03010	SM00857	Resolvase, N terminal domain
TC41_RS03040	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TC41_RS03040	SM00292	breast cancer carboxy-terminal domain
TC41_RS03040	SM00532	Ligase N family
TC41_RS03060	SM00845	GatB domain
TC41_RS03095	SM00862	Transcriptional regulatory protein, C terminal
TC41_RS03120	SM01007	Class II Aldolase and Adducin N-terminal domain
TC41_RS03165	SM00420	helix_turn_helix, Deoxyribose operon repressor
TC41_RS03165	SM01134	TC41_RS03165
TC41_RS03280	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
TC41_RS03290	SM00387	Histidine kinase-like ATPases
TC41_RS03290	SM00388	His Kinase A (phosphoacceptor) domain
TC41_RS03315	SM01192	TC41_RS03315
TC41_RS03315	SM01193	TC41_RS03315
TC41_RS03330	SM00316	Ribosomal protein S1-like RNA-binding domain
TC41_RS03330	SM00955	TC41_RS03330
TC41_RS03390	SM00944	Pro-kumamolisin, activation domain
TC41_RS03405	SM00903	Flavin reductase like domain
TC41_RS03425	SM00796	Allophanate hydrolase subunit 1
TC41_RS03425	SM00797	Allophanate hydrolase subunit 2
TC41_RS03425	SM00878	Biotin carboxylase C-terminal domain
TC41_RS03460	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TC41_RS03495	SM00631	TC41_RS03495
TC41_RS03545	SM01068	Putative carbohydrate binding domain
TC41_RS03580	SM00382	ATPases associated with a variety of cellular activities
TC41_RS03580	SM01086	C-terminal, D2-small domain, of ClpB protein
TC41_RS03625	SM00342	helix_turn_helix, arabinose operon control protein
TC41_RS03625	SM00448	cheY-homologous receiver domain
TC41_RS03635	SM01001	AIR carboxylase
TC41_RS03660	SM00852	Probable molybdopterin binding domain
TC41_RS03675	SM00859	Semialdehyde dehydrogenase, NAD binding domain
TC41_RS03790	SM00861	Transketolase, pyrimidine binding domain
TC41_RS03820	SM00829	Enoylreductase
TC41_RS03825	SM00382	ATPases associated with a variety of cellular activities
TC41_RS03835	SM00829	Enoylreductase
TC41_RS03845	SM00382	ATPases associated with a variety of cellular activities
TC41_RS03850	SM00382	ATPases associated with a variety of cellular activities
TC41_RS03875	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
TC41_RS03875	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
TC41_RS03890	SM00450	Rhodanese Homology Domain
TC41_RS03900	SM00857	Resolvase, N terminal domain
TC41_RS03915	SM00917	LeuA allosteric (dimerisation) domain
TC41_RS03935	SM00857	Resolvase, N terminal domain
TC41_RS03980	SM00382	ATPases associated with a variety of cellular activities
TC41_RS03985	SM00867	YceI-like domain 
TC41_RS04005	SM00347	helix_turn_helix multiple antibiotic resistance protein
TC41_RS04060	SM00342	helix_turn_helix, arabinose operon control protein
TC41_RS04090	SM00226	Low molecular weight phosphatase family
TC41_RS04105	SM00881	CoA binding domain
TC41_RS04125	SM00420	helix_turn_helix, Deoxyribose operon repressor
TC41_RS04125	SM01134	TC41_RS04125
TC41_RS04165	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TC41_RS04195	SM00861	Transketolase, pyrimidine binding domain
TC41_RS04235	SM00354	helix_turn _helix lactose operon repressor
TC41_RS04275	SM00829	Enoylreductase
TC41_RS04280	SM00829	Enoylreductase
TC41_RS04290	SM00257	Lysin motif
TC41_RS04350	SM00829	Enoylreductase
TC41_RS04390	SM00382	ATPases associated with a variety of cellular activities
TC41_RS04395	SM00861	Transketolase, pyrimidine binding domain
TC41_RS04430	SM00450	Rhodanese Homology Domain
TC41_RS04495	SM00905	Dihydroneopterin aldolase
TC41_RS04590	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
TC41_RS04590	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
TC41_RS04600	SM00382	ATPases associated with a variety of cellular activities
TC41_RS04695	SM00487	DEAD-like helicases superfamily
TC41_RS04695	SM00490	helicase superfamily c-terminal domain
TC41_RS04715	SM00481	DNA polymerase alpha chain like domain
TC41_RS04720	SM00155	Phospholipase D. Active site motifs.
TC41_RS04725	SM00014	Acid phosphatase homologues
TC41_RS04755	SM00518	AP endonuclease family 2
TC41_RS04850	SM00382	ATPases associated with a variety of cellular activities
TC41_RS04885	SM00849	Metallo-beta-lactamase superfamily
TC41_RS04945	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TC41_RS05040	SM01350	TC41_RS05040
TC41_RS05110	SM01038	Beta galactosidase small chain
TC41_RS05150	SM00822	TC41_RS05150
TC41_RS05170	SM00354	helix_turn _helix lactose operon repressor
TC41_RS05205	SM00859	Semialdehyde dehydrogenase, NAD binding domain
TC41_RS05305	SM00487	DEAD-like helicases superfamily
TC41_RS05305	SM00490	helicase superfamily c-terminal domain
TC41_RS05355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
TC41_RS05360	SM00382	ATPases associated with a variety of cellular activities
TC41_RS05380	SM00450	Rhodanese Homology Domain
TC41_RS05410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
TC41_RS05410	SM00895	TC41_RS05410
TC41_RS05435	SM00914	TC41_RS05435
TC41_RS05460	SM00981	TC41_RS05460
TC41_RS05480	SM00822	TC41_RS05480
TC41_RS05505	SM00740	TC41_RS05505
TC41_RS05510	SM00740	TC41_RS05510
TC41_RS05555	SM00857	Resolvase, N terminal domain
TC41_RS05585	SM00842	Cell division protein FtsA
TC41_RS05590	SM00864	Tubulin/FtsZ family, GTPase domain
TC41_RS05590	SM00865	Tubulin/FtsZ family, C-terminal domain
TC41_RS05695	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
TC41_RS05700	SM00851	MGS-like domain
TC41_RS05700	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
TC41_RS05700	SM01209	TC41_RS05700
TC41_RS05705	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
TC41_RS05725	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
TC41_RS05735	SM00831	Cation transporter/ATPase, N-terminus
TC41_RS05745	SM01409	TC41_RS05745
TC41_RS05755	SM00487	DEAD-like helicases superfamily
TC41_RS05755	SM00490	helicase superfamily c-terminal domain
TC41_RS05780	SM00331	Sigma factor PP2C-like phosphatases
TC41_RS05780	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
TC41_RS05785	SM00220	Serine/Threonine protein kinases, catalytic domain
TC41_RS05785	SM00740	TC41_RS05785
TC41_RS05810	SM00487	DEAD-like helicases superfamily
TC41_RS05810	SM00490	helicase superfamily c-terminal domain
TC41_RS05870	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
TC41_RS05875	SM00822	TC41_RS05875
TC41_RS05885	SM00825	Beta-ketoacyl synthase
TC41_RS05890	SM00358	Double-stranded RNA binding motif
TC41_RS05890	SM00535	Ribonuclease III family
TC41_RS05895	SM00968	SMC proteins Flexible Hinge Domain
TC41_RS05900	SM00382	ATPases associated with a variety of cellular activities
TC41_RS05900	SM00962	SRP54-type protein, GTPase domain
TC41_RS05900	SM00963	SRP54-type protein, helical bundle domain
TC41_RS05910	SM00382	ATPases associated with a variety of cellular activities
TC41_RS05910	SM00962	SRP54-type protein, GTPase domain
TC41_RS05910	SM00963	SRP54-type protein, helical bundle domain
TC41_RS05960	SM00363	S4 RNA-binding domain
TC41_RS06025	SM00382	ATPases associated with a variety of cellular activities
TC41_RS06040	SM00881	CoA binding domain
TC41_RS06055	SM00257	Lysin motif
TC41_RS06065	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
TC41_RS06065	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
TC41_RS06065	SM00493	TC41_RS06065
TC41_RS06085	SM00382	ATPases associated with a variety of cellular activities
TC41_RS06085	SM01086	C-terminal, D2-small domain, of ClpB protein
TC41_RS06120	SM00382	ATPases associated with a variety of cellular activities
TC41_RS06180	SM00448	cheY-homologous receiver domain
TC41_RS06215	SM00382	ATPases associated with a variety of cellular activities
TC41_RS06215	SM00962	SRP54-type protein, GTPase domain
TC41_RS06230	SM00073	Histidine Phosphotransfer domain
TC41_RS06230	SM00260	Two component signalling adaptor domain
TC41_RS06230	SM00387	Histidine kinase-like ATPases
TC41_RS06230	SM01231	TC41_RS06230
TC41_RS06235	SM00260	Two component signalling adaptor domain
TC41_RS06305	SM00479	TC41_RS06305
TC41_RS06305	SM00481	DNA polymerase alpha chain like domain
TC41_RS06330	SM00316	Ribosomal protein S1-like RNA-binding domain
TC41_RS06360	SM00904	Riboflavin kinase
TC41_RS06370	SM01387	TC41_RS06370
TC41_RS06375	SM00316	Ribosomal protein S1-like RNA-binding domain
TC41_RS06375	SM00322	K homology RNA-binding domain
TC41_RS06395	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
TC41_RS06405	SM00859	Semialdehyde dehydrogenase, NAD binding domain
TC41_RS06415	SM01130	TC41_RS06415
TC41_RS06420	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
TC41_RS06460	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
TC41_RS06465	SM00849	Metallo-beta-lactamase superfamily
TC41_RS06480	SM00382	ATPases associated with a variety of cellular activities
TC41_RS06480	SM00843	TC41_RS06480
TC41_RS06505	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS06520	SM00852	Probable molybdopterin binding domain
TC41_RS06525	SM00487	DEAD-like helicases superfamily
TC41_RS06525	SM00490	helicase superfamily c-terminal domain
TC41_RS06530	SM00382	ATPases associated with a variety of cellular activities
TC41_RS06540	SM00322	K homology RNA-binding domain
TC41_RS06540	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TC41_RS06585	SM00729	Elongator protein 3, MiaB family, Radical SAM
TC41_RS06595	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
TC41_RS06595	SM00534	ATPase domain of DNA mismatch repair MUTS family
TC41_RS06600	SM00853	MutL C terminal dimerisation domain
TC41_RS06600	SM01340	TC41_RS06600
TC41_RS06650	SM00382	ATPases associated with a variety of cellular activities
TC41_RS06675	SM01329	TC41_RS06675
TC41_RS06720	SM00382	ATPases associated with a variety of cellular activities
TC41_RS06750	SM00422	helix_turn_helix, mercury resistance
TC41_RS06755	SM01230	TC41_RS06755
TC41_RS06765	SM00858	TC41_RS06765
TC41_RS06815	SM00267	diguanylate cyclase
TC41_RS06840	SM00893	Electron transfer flavoprotein domain
TC41_RS06845	SM00893	Electron transfer flavoprotein domain
TC41_RS06925	SM00116	Domain in cystathionine beta-synthase and other proteins.
TC41_RS06960	SM00345	helix_turn_helix gluconate operon transcriptional repressor
TC41_RS06960	SM00895	TC41_RS06960
TC41_RS06990	SM00859	Semialdehyde dehydrogenase, NAD binding domain
TC41_RS07010	SM00346	helix_turn_helix isocitrate lyase regulation
TC41_RS07030	SM01230	TC41_RS07030
TC41_RS07085	SM00382	ATPases associated with a variety of cellular activities
TC41_RS07135	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
TC41_RS07140	SM00479	TC41_RS07140
TC41_RS07140	SM00487	DEAD-like helicases superfamily
TC41_RS07140	SM00491	TC41_RS07140
TC41_RS07195	SM00914	TC41_RS07195
TC41_RS07270	SM00363	S4 RNA-binding domain
TC41_RS07280	SM00257	Lysin motif
TC41_RS07290	SM00382	ATPases associated with a variety of cellular activities
TC41_RS07305	SM00116	Domain in cystathionine beta-synthase and other proteins.
TC41_RS07315	SM00138	Methyltransferase, chemotaxis proteins 
TC41_RS07325	SM00562	TC41_RS07325
TC41_RS07355	SM00829	Enoylreductase
TC41_RS07375	SM01207	TC41_RS07375
TC41_RS07390	SM00316	Ribosomal protein S1-like RNA-binding domain
TC41_RS07395	SM00563	Phosphate acyltransferases
TC41_RS07430	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
TC41_RS07440	SM00354	helix_turn _helix lactose operon repressor
TC41_RS07510	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS07520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TC41_RS07520	SM00387	Histidine kinase-like ATPases
TC41_RS07520	SM00388	His Kinase A (phosphoacceptor) domain
TC41_RS07525	SM00448	cheY-homologous receiver domain
TC41_RS07525	SM00862	Transcriptional regulatory protein, C terminal
TC41_RS07535	SM00363	S4 RNA-binding domain
TC41_RS07605	SM00387	Histidine kinase-like ATPases
TC41_RS07615	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS07620	SM00936	Penicillin-binding protein 5, C-terminal domain 
TC41_RS07665	SM00729	Elongator protein 3, MiaB family, Radical SAM
TC41_RS07680	SM00636	TC41_RS07680
TC41_RS07715	SM00448	cheY-homologous receiver domain
TC41_RS07720	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TC41_RS07740	SM00363	S4 RNA-binding domain
TC41_RS07800	SM00878	Biotin carboxylase C-terminal domain
TC41_RS07845	SM00382	ATPases associated with a variety of cellular activities
TC41_RS07850	SM00841	Elongation factor P, C-terminal
TC41_RS07850	SM01185	TC41_RS07850
TC41_RS07860	SM00855	Phosphoglycerate mutase family
TC41_RS07880	SM00487	DEAD-like helicases superfamily
TC41_RS07880	SM00490	helicase superfamily c-terminal domain
TC41_RS07900	SM00966	SpoVT / AbrB like domain 
TC41_RS07965	SM00052	Putative diguanylate phosphodiesterase
TC41_RS07990	SM00411	bacterial (prokaryotic) histone like domain
TC41_RS07995	SM00634	Bacterial Ig-like domain (group 1)
TC41_RS08060	SM00267	diguanylate cyclase
TC41_RS08100	SM01040	BRO family, N-terminal domain
TC41_RS08125	SM00421	helix_turn_helix, Lux Regulon
TC41_RS08150	SM01040	BRO family, N-terminal domain
TC41_RS08180	SM00470	ParB-like nuclease domain
TC41_RS08185	SM00470	ParB-like nuclease domain
TC41_RS08215	SM00470	ParB-like nuclease domain
TC41_RS08240	SM00490	helicase superfamily c-terminal domain
TC41_RS08300	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TC41_RS08500	SM00421	helix_turn_helix, Lux Regulon
TC41_RS08515	SM00479	TC41_RS08515
TC41_RS08595	SM00480	DNA polymerase III beta subunit
TC41_RS08625	SM00487	DEAD-like helicases superfamily
TC41_RS08625	SM00490	helicase superfamily c-terminal domain
TC41_RS08645	SM01040	BRO family, N-terminal domain
TC41_RS08670	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS08690	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS08695	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS08700	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS08740	SM00382	ATPases associated with a variety of cellular activities
TC41_RS08805	SM00268	Actin
TC41_RS08825	SM01208	TC41_RS08825
TC41_RS08860	SM01004	Delta-aminolevulinic acid dehydratase
TC41_RS08890	SM00382	ATPases associated with a variety of cellular activities
TC41_RS08890	SM00464	Found in ATP-dependent protease La (LON)
TC41_RS08895	SM00382	ATPases associated with a variety of cellular activities
TC41_RS08900	SM00382	ATPases associated with a variety of cellular activities
TC41_RS08900	SM00994	ClpX C4-type zinc finger
TC41_RS08900	SM01086	C-terminal, D2-small domain, of ClpB protein
TC41_RS08935	SM00347	helix_turn_helix multiple antibiotic resistance protein
TC41_RS08960	SM00421	helix_turn_helix, Lux Regulon
TC41_RS08975	SM00345	helix_turn_helix gluconate operon transcriptional repressor
TC41_RS08975	SM00866	TC41_RS08975
TC41_RS08985	SM00450	Rhodanese Homology Domain
TC41_RS09010	SM00465	GIY-YIG type nucleases (URI domain)
TC41_RS09095	SM00347	helix_turn_helix multiple antibiotic resistance protein
TC41_RS09115	SM00155	Phospholipase D. Active site motifs.
TC41_RS09145	SM00849	Metallo-beta-lactamase superfamily
TC41_RS09185	SM00382	ATPases associated with a variety of cellular activities
TC41_RS09190	SM00382	ATPases associated with a variety of cellular activities
TC41_RS09220	SM00382	ATPases associated with a variety of cellular activities
TC41_RS09230	SM00257	Lysin motif
TC41_RS09235	SM00903	Flavin reductase like domain
TC41_RS09320	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
TC41_RS09320	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
TC41_RS09390	SM00382	ATPases associated with a variety of cellular activities
TC41_RS09395	SM00382	ATPases associated with a variety of cellular activities
TC41_RS09415	SM00347	helix_turn_helix multiple antibiotic resistance protein
TC41_RS09425	SM00382	ATPases associated with a variety of cellular activities
TC41_RS09550	SM00387	Histidine kinase-like ATPases
TC41_RS09550	SM00388	His Kinase A (phosphoacceptor) domain
TC41_RS09570	SM00387	Histidine kinase-like ATPases
TC41_RS09570	SM00388	His Kinase A (phosphoacceptor) domain
TC41_RS09575	SM00448	cheY-homologous receiver domain
TC41_RS09575	SM00862	Transcriptional regulatory protein, C terminal
TC41_RS09620	SM00493	TC41_RS09620
TC41_RS09645	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TC41_RS09680	SM01133	TC41_RS09680
TC41_RS09685	SM00729	Elongator protein 3, MiaB family, Radical SAM
TC41_RS09700	SM00271	DnaJ molecular chaperone homology domain
TC41_RS09720	SM00729	Elongator protein 3, MiaB family, Radical SAM
TC41_RS09725	SM00838	Elongation factor G C-terminus
TC41_RS09775	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TC41_RS09780	SM00529	Helix-turn-helix diphteria tox regulatory element
TC41_RS09845	SM00732	Likely ribonuclease with RNase H fold.
TC41_RS09855	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
TC41_RS09880	SM00382	ATPases associated with a variety of cellular activities
TC41_RS09890	SM00226	Low molecular weight phosphatase family
TC41_RS09930	SM00382	ATPases associated with a variety of cellular activities
TC41_RS09945	SM00849	Metallo-beta-lactamase superfamily
TC41_RS09990	SM00878	Biotin carboxylase C-terminal domain
TC41_RS10010	SM00882	Coenzyme A transferase
TC41_RS10015	SM00882	Coenzyme A transferase
TC41_RS10080	SM00257	Lysin motif
TC41_RS10120	SM00419	helix_turn_helix, cAMP Regulatory protein
TC41_RS10120	SM00529	Helix-turn-helix diphteria tox regulatory element
TC41_RS10120	SM00899	TC41_RS10120
TC41_RS10175	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TC41_RS10175	SM00954	Region found in RelA / SpoT proteins
TC41_RS10220	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TC41_RS10220	SM00267	diguanylate cyclase
TC41_RS10230	SM01323	TC41_RS10230
TC41_RS10255	SM00382	ATPases associated with a variety of cellular activities
TC41_RS10260	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TC41_RS10305	SM00363	S4 RNA-binding domain
TC41_RS10315	SM00463	Small MutS-related domain
TC41_RS10315	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
TC41_RS10315	SM00534	ATPase domain of DNA mismatch repair MUTS family
TC41_RS10335	SM00873	B3/4 domain
TC41_RS10335	SM00874	tRNA synthetase B5 domain
TC41_RS10335	SM00896	Ferredoxin-fold anticodon binding domain
TC41_RS10350	SM01001	AIR carboxylase
TC41_RS10355	SM01133	TC41_RS10355
TC41_RS10370	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TC41_RS10370	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TC41_RS10380	SM00382	ATPases associated with a variety of cellular activities
TC41_RS10390	SM00919	Malic enzyme, NAD binding domain
TC41_RS10390	SM01274	TC41_RS10390
TC41_RS10405	SM00861	Transketolase, pyrimidine binding domain
TC41_RS10530	SM00967	RNA 2'-O ribose methyltransferase substrate binding
TC41_RS10560	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
TC41_RS10605	SM01236	TC41_RS10605
TC41_RS10620	SM00822	TC41_RS10620
TC41_RS10650	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS10680	SM00357	Cold shock protein domain
TC41_RS10795	SM00382	ATPases associated with a variety of cellular activities
TC41_RS10810	SM00116	Domain in cystathionine beta-synthase and other proteins.
TC41_RS10845	SM01329	TC41_RS10845
TC41_RS10900	SM00354	helix_turn _helix lactose operon repressor
TC41_RS10950	SM00966	SpoVT / AbrB like domain 
TC41_RS11000	SM00858	TC41_RS11000
TC41_RS11015	SM00052	Putative diguanylate phosphodiesterase
TC41_RS11040	SM00411	bacterial (prokaryotic) histone like domain
TC41_RS11045	SM00634	Bacterial Ig-like domain (group 1)
TC41_RS11100	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TC41_RS11105	SM00267	diguanylate cyclase
TC41_RS11145	SM01040	BRO family, N-terminal domain
TC41_RS11170	SM00421	helix_turn_helix, Lux Regulon
TC41_RS11225	SM00470	ParB-like nuclease domain
TC41_RS11250	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS11255	SM00470	ParB-like nuclease domain
TC41_RS11275	SM00470	ParB-like nuclease domain
TC41_RS11425	SM00421	helix_turn_helix, Lux Regulon
TC41_RS11435	SM00479	TC41_RS11435
TC41_RS11480	SM00480	DNA polymerase III beta subunit
TC41_RS11505	SM00487	DEAD-like helicases superfamily
TC41_RS11505	SM00490	helicase superfamily c-terminal domain
TC41_RS11520	SM01040	BRO family, N-terminal domain
TC41_RS11580	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS11585	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS11590	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS11595	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS11600	SM00857	Resolvase, N terminal domain
TC41_RS11605	SM00257	Lysin motif
TC41_RS11640	SM00382	ATPases associated with a variety of cellular activities
TC41_RS11645	SM00382	ATPases associated with a variety of cellular activities
TC41_RS11680	SM00382	ATPases associated with a variety of cellular activities
TC41_RS11685	SM00382	ATPases associated with a variety of cellular activities
TC41_RS11690	SM00448	cheY-homologous receiver domain
TC41_RS11690	SM00862	Transcriptional regulatory protein, C terminal
TC41_RS11695	SM00387	Histidine kinase-like ATPases
TC41_RS11695	SM00388	His Kinase A (phosphoacceptor) domain
TC41_RS11705	SM00387	Histidine kinase-like ATPases
TC41_RS11705	SM00388	His Kinase A (phosphoacceptor) domain
TC41_RS11710	SM00448	cheY-homologous receiver domain
TC41_RS11710	SM00862	Transcriptional regulatory protein, C terminal
TC41_RS11725	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TC41_RS11745	SM00342	helix_turn_helix, arabinose operon control protein
TC41_RS11745	SM00448	cheY-homologous receiver domain
TC41_RS11760	SM00382	ATPases associated with a variety of cellular activities
TC41_RS11780	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
TC41_RS11795	SM00382	ATPases associated with a variety of cellular activities
TC41_RS11800	SM00382	ATPases associated with a variety of cellular activities
TC41_RS11805	SM00342	helix_turn_helix, arabinose operon control protein
TC41_RS11910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TC41_RS11945	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TC41_RS11985	SM00420	helix_turn_helix, Deoxyribose operon repressor
TC41_RS11985	SM01134	TC41_RS11985
TC41_RS12010	SM00633	Glycosyl hydrolase family 10
TC41_RS12020	SM00829	Enoylreductase
TC41_RS12065	SM00244	prohibitin homologues
TC41_RS12100	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
TC41_RS12100	SM01232	TC41_RS12100
TC41_RS12105	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
TC41_RS12105	SM00475	5'-3' exonuclease
TC41_RS12105	SM00482	DNA polymerase A domain
TC41_RS12110	SM00830	Chorismate mutase type II
TC41_RS12120	SM01329	TC41_RS12120
TC41_RS12125	SM00388	His Kinase A (phosphoacceptor) domain
TC41_RS12130	SM00448	cheY-homologous receiver domain
TC41_RS12130	SM00862	Transcriptional regulatory protein, C terminal
TC41_RS12160	SM00481	DNA polymerase alpha chain like domain
TC41_RS12165	SM00116	Domain in cystathionine beta-synthase and other proteins.
TC41_RS12240	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS12305	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS12315	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS12335	SM00946	Prolyl-tRNA synthetase, C-terminal
TC41_RS12355	SM00829	Enoylreductase
TC41_RS12370	SM00823	Phosphopantetheine attachment site
TC41_RS12425	SM00822	TC41_RS12425
TC41_RS12440	SM00825	Beta-ketoacyl synthase
TC41_RS12460	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TC41_RS12460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TC41_RS12580	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TC41_RS12620	SM01240	TC41_RS12620
TC41_RS12625	SM00861	Transketolase, pyrimidine binding domain
TC41_RS12670	SM00710	Parallel beta-helix repeats
TC41_RS12700	SM00354	helix_turn _helix lactose operon repressor
TC41_RS12705	SM00903	Flavin reductase like domain
TC41_RS12710	SM00479	TC41_RS12710
TC41_RS12720	SM01230	TC41_RS12720
TC41_RS12735	SM00382	ATPases associated with a variety of cellular activities
TC41_RS12740	SM00382	ATPases associated with a variety of cellular activities
TC41_RS12780	SM00729	Elongator protein 3, MiaB family, Radical SAM
TC41_RS12810	SM01131	TC41_RS12810
TC41_RS12920	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TC41_RS12970	SM00849	Metallo-beta-lactamase superfamily
TC41_RS12985	SM00829	Enoylreductase
TC41_RS13020	SM00091	PAS domain
TC41_RS13050	SM00346	helix_turn_helix isocitrate lyase regulation
TC41_RS13120	SM00937	TC41_RS13120
TC41_RS13130	SM00957	SecA DEAD-like domain
TC41_RS13130	SM00958	SecA preprotein cross-linking domain
TC41_RS13210	SM00387	Histidine kinase-like ATPases
TC41_RS13210	SM00388	His Kinase A (phosphoacceptor) domain
TC41_RS13215	SM00448	cheY-homologous receiver domain
TC41_RS13215	SM00862	Transcriptional regulatory protein, C terminal
TC41_RS13220	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS13230	SM00421	helix_turn_helix, Lux Regulon
TC41_RS13230	SM00448	cheY-homologous receiver domain
TC41_RS13260	SM00852	Probable molybdopterin binding domain
TC41_RS13340	SM00363	S4 RNA-binding domain
TC41_RS13370	SM00354	helix_turn _helix lactose operon repressor
TC41_RS13410	SM00900	TC41_RS13410
TC41_RS13470	SM00382	ATPases associated with a variety of cellular activities
TC41_RS13500	SM00052	Putative diguanylate phosphodiesterase
TC41_RS13500	SM00267	diguanylate cyclase
TC41_RS13555	SM01217	TC41_RS13555
TC41_RS13580	SM00014	Acid phosphatase homologues
TC41_RS13630	SM00450	Rhodanese Homology Domain
TC41_RS13630	SM00849	Metallo-beta-lactamase superfamily
TC41_RS13635	SM00450	Rhodanese Homology Domain
TC41_RS13645	SM00450	Rhodanese Homology Domain
TC41_RS13670	SM00487	DEAD-like helicases superfamily
TC41_RS13670	SM00490	helicase superfamily c-terminal domain
TC41_RS13690	SM00857	Resolvase, N terminal domain
TC41_RS13755	SM00344	helix_turn_helix ASNC type
TC41_RS13770	SM00829	Enoylreductase
TC41_RS13920	SM00646	TC41_RS13920
TC41_RS13945	SM00662	RNA polymerases D
TC41_RS13950	SM00363	S4 RNA-binding domain
TC41_RS13950	SM01390	TC41_RS13950
TC41_RS13970	SM00316	Ribosomal protein S1-like RNA-binding domain
TC41_RS14030	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
TC41_RS14035	SM01374	TC41_RS14035
TC41_RS14055	SM00322	K homology RNA-binding domain
TC41_RS14070	SM01382	TC41_RS14070
TC41_RS14070	SM01383	TC41_RS14070
TC41_RS14090	SM01403	TC41_RS14090
TC41_RS14100	SM00838	Elongation factor G C-terminus
TC41_RS14100	SM00889	Elongation factor G, domain IV
TC41_RS14120	SM00663	RNA polymerase I subunit A N-terminus
TC41_RS14150	SM00649	Ribosomal protein L11/L12
TC41_RS14155	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
TC41_RS14155	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
TC41_RS14180	SM00967	RNA 2'-O ribose methyltransferase substrate binding
TC41_RS14190	SM00840	TC41_RS14190
TC41_RS14225	SM00382	ATPases associated with a variety of cellular activities
TC41_RS14230	SM00382	ATPases associated with a variety of cellular activities
TC41_RS14230	SM01086	C-terminal, D2-small domain, of ClpB protein
TC41_RS14255	SM00382	ATPases associated with a variety of cellular activities
TC41_RS14260	SM00421	helix_turn_helix, Lux Regulon
TC41_RS14325	SM00382	ATPases associated with a variety of cellular activities
TC41_RS14390	SM00226	Low molecular weight phosphatase family
TC41_RS14435	SM00937	TC41_RS14435
TC41_RS14450	SM00357	Cold shock protein domain
TC41_RS14450	SM00382	ATPases associated with a variety of cellular activities
TC41_RS14450	SM00959	Rho termination factor, N-terminal domain
TC41_RS14460	SM00448	cheY-homologous receiver domain
TC41_RS14485	SM00797	Allophanate hydrolase subunit 2
TC41_RS14490	SM00796	Allophanate hydrolase subunit 1
TC41_RS14520	SM00829	Enoylreductase
TC41_RS14560	SM00729	Elongator protein 3, MiaB family, Radical SAM
TC41_RS14565	SM00851	MGS-like domain
TC41_RS14670	SM01207	TC41_RS14670
TC41_RS14715	SM01350	TC41_RS14715
TC41_RS14770	SM00422	helix_turn_helix, mercury resistance
TC41_RS14785	SM00729	Elongator protein 3, MiaB family, Radical SAM
TC41_RS14785	SM00876	Biotin and Thiamin Synthesis associated domain
TC41_RS14800	SM00382	ATPases associated with a variety of cellular activities
TC41_RS14805	SM00829	Enoylreductase
TC41_RS14835	SM00267	diguanylate cyclase
TC41_RS14850	SM00354	helix_turn _helix lactose operon repressor
TC41_RS14870	SM00642	Alpha-amylase domain
TC41_RS14895	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TC41_RS14910	SM00857	Resolvase, N terminal domain
TC41_RS14965	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
TC41_RS14995	SM00342	helix_turn_helix, arabinose operon control protein
TC41_RS15010	SM00938	Nitrogen regulatory protein P-II
TC41_RS15035	SM00813	Alpha-L-arabinofuranosidase C-terminus
TC41_RS15055	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TC41_RS15070	SM01007	Class II Aldolase and Adducin N-terminal domain
TC41_RS15085	SM00345	helix_turn_helix gluconate operon transcriptional repressor
TC41_RS15115	SM00271	DnaJ molecular chaperone homology domain
TC41_RS15125	SM00052	Putative diguanylate phosphodiesterase
TC41_RS15125	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TC41_RS15125	SM00091	PAS domain
TC41_RS15125	SM00267	diguanylate cyclase
TC41_RS15145	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TC41_RS15150	SM00849	Metallo-beta-lactamase superfamily
TC41_RS15165	SM00091	PAS domain
TC41_RS15165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TC41_RS15165	SM00387	Histidine kinase-like ATPases
TC41_RS15165	SM00388	His Kinase A (phosphoacceptor) domain
TC41_RS15170	SM00448	cheY-homologous receiver domain
TC41_RS15170	SM00862	Transcriptional regulatory protein, C terminal
TC41_RS15215	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
TC41_RS15250	SM00470	ParB-like nuclease domain
TC41_RS15260	SM00470	ParB-like nuclease domain
TC41_RS15270	SM01228	TC41_RS15270
TC41_RS15280	SM00393	Putative single-stranded nucleic acids-binding domain
TC41_RS15280	SM01245	TC41_RS15280
TC41_RS15290	SM01234	TC41_RS15290
TC41_RS15325	SM00347	helix_turn_helix multiple antibiotic resistance protein
TC41_RS15385	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TC41_RS15405	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS15415	SM00530	Helix-turn-helix XRE-family like proteins 
TC41_RS15475	SM00354	helix_turn _helix lactose operon repressor
TC41_RS15485	SM00382	ATPases associated with a variety of cellular activities
