locus-tag class description ATR_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ATR_RS00005 PF00308 Bacterial dnaA protein ATR_RS00005 PF11638 DnaA N-terminal domain ATR_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ATR_RS00010 PF02767 DNA polymerase III beta subunit, central domain ATR_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ATR_RS00015 PF01751 Toprim domain ATR_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus ATR_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS00015 PF00204 DNA gyrase B ATR_RS00020 PF14489 QueF-like protein ATR_RS00040 PF13649 Methyltransferase domain ATR_RS00050 PF00005 ABC transporter ATR_RS00055 PF01032 FecCD transport family ATR_RS00070 PF00005 ABC transporter ATR_RS00070 PF08402 TOBE domain ATR_RS00075 PF00528 Binding-protein-dependent transport system inner membrane component ATR_RS00090 PF03459 TOBE domain ATR_RS00090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATR_RS00100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATR_RS00100 PF03466 LysR substrate binding domain ATR_RS00110 PF00291 Pyridoxal-phosphate dependent enzyme ATR_RS00115 PF04264 YceI-like domain ATR_RS00120 PF00873 AcrB/AcrD/AcrF family ATR_RS00140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS00145 PF00072 Response regulator receiver domain ATR_RS00145 PF00486 Transcriptional regulatory protein, C terminal ATR_RS00150 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ATR_RS00155 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATR_RS00160 PF04055 Radical SAM superfamily ATR_RS00175 PF00977 Histidine biosynthesis protein ATR_RS00180 PF00398 Ribosomal RNA adenine dimethylase ATR_RS00185 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ATR_RS00185 PF00753 Metallo-beta-lactamase superfamily ATR_RS00185 PF17770 Ribonuclease J C-terminal domain ATR_RS00190 PF00571 CBS domain ATR_RS00190 PF01380 SIS domain ATR_RS00195 PF00849 RNA pseudouridylate synthase ATR_RS00195 PF01479 S4 domain ATR_RS00200 PF12002 MgsA AAA+ ATPase C terminal ATR_RS00200 PF16193 AAA C-terminal domain ATR_RS00200 PF01661 Macro domain ATR_RS00200 PF05496 Holliday junction DNA helicase RuvB P-loop domain ATR_RS00205 PF03653 Uncharacterised protein family (UPF0093) ATR_RS00210 PF02562 PhoH-like protein ATR_RS00210 PF13638 PIN domain ATR_RS00220 PF13537 Glutamine amidotransferase domain ATR_RS00220 PF00733 Asparagine synthase ATR_RS00230 PF01384 Phosphate transporter family ATR_RS00235 PF00271 Helicase conserved C-terminal domain ATR_RS00235 PF00270 DEAD/DEAH box helicase ATR_RS00240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATR_RS00240 PF00289 Biotin carboxylase, N-terminal domain ATR_RS00240 PF02785 Biotin carboxylase C-terminal domain ATR_RS00245 PF00364 Biotin-requiring enzyme ATR_RS00250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATR_RS00260 PF02934 GatB/GatE catalytic domain ATR_RS00260 PF02637 GatB domain ATR_RS00265 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ATR_RS00265 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ATR_RS00270 PF08240 Alcohol dehydrogenase GroES-like domain ATR_RS00270 PF00107 Zinc-binding dehydrogenase ATR_RS00280 PF00691 OmpA family ATR_RS00280 PF05736 OprF membrane domain ATR_RS00285 PF00268 Ribonucleotide reductase, small chain ATR_RS00290 PF02867 Ribonucleotide reductase, barrel domain ATR_RS00290 PF00317 Ribonucleotide reductase, all-alpha domain ATR_RS00290 PF03477 ATP cone domain ATR_RS00295 PF00206 Lyase ATR_RS00295 PF10397 Adenylosuccinate lyase C-terminus ATR_RS00300 PF00849 RNA pseudouridylate synthase ATR_RS00305 PF01842 ACT domain ATR_RS00305 PF00742 Homoserine dehydrogenase ATR_RS00305 PF03447 Homoserine dehydrogenase, NAD binding domain ATR_RS00310 PF00155 Aminotransferase class I and II ATR_RS00325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATR_RS00330 PF01197 Ribosomal protein L31 ATR_RS00345 PF01040 UbiA prenyltransferase family ATR_RS00380 PF09383 NIL domain ATR_RS00380 PF00005 ABC transporter ATR_RS00385 PF02405 Permease MlaE ATR_RS00390 PF02664 S-Ribosylhomocysteinase (LuxS) ATR_RS00395 PF01266 FAD dependent oxidoreductase ATR_RS00395 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ATR_RS00400 PF07943 Penicillin-binding protein 5, C-terminal domain ATR_RS00400 PF00768 D-alanyl-D-alanine carboxypeptidase ATR_RS00410 PF02574 Homocysteine S-methyltransferase ATR_RS00410 PF02965 Vitamin B12 dependent methionine synthase, activation domain ATR_RS00410 PF02607 B12 binding domain ATR_RS00410 PF02310 B12 binding domain ATR_RS00410 PF00809 Pterin binding enzyme ATR_RS00420 PF01063 Amino-transferase class IV ATR_RS00435 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ATR_RS00435 PF01502 Phosphoribosyl-AMP cyclohydrolase ATR_RS00445 PF00572 Ribosomal protein L13 ATR_RS00450 PF00380 Ribosomal protein S9/S16 ATR_RS00460 PF03070 TENA/THI-4/PQQC family ATR_RS00465 PF02110 Hydroxyethylthiazole kinase family ATR_RS00470 PF08543 Phosphomethylpyrimidine kinase ATR_RS00470 PF02581 Thiamine monophosphate synthase ATR_RS00475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATR_RS00480 PF13419 Haloacid dehalogenase-like hydrolase ATR_RS00490 PF01165 Ribosomal protein S21 ATR_RS00495 PF01967 MoaC family ATR_RS00510 PF01975 Survival protein SurE ATR_RS00515 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATR_RS00515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATR_RS00515 PF14579 Helix-hairpin-helix motif ATR_RS00515 PF02811 PHP domain ATR_RS00520 PF01965 DJ-1/PfpI family ATR_RS00535 PF01368 DHH family ATR_RS00535 PF17768 RecJ OB domain ATR_RS00535 PF02272 DHHA1 domain ATR_RS00535 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ATR_RS00540 PF00117 Glutamine amidotransferase class-I ATR_RS00540 PF06418 CTP synthase N-terminus ATR_RS00545 PF13746 4Fe-4S dicluster domain ATR_RS00545 PF12801 4Fe-4S binding domain ATR_RS00545 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ATR_RS00555 PF01121 Dephospho-CoA kinase ATR_RS00560 PF17284 Spermidine synthase tetramerisation domain ATR_RS00565 PF00586 AIR synthase related protein, N-terminal domain ATR_RS00565 PF02769 AIR synthase related protein, C-terminal domain ATR_RS00570 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATR_RS00570 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ATR_RS00575 PF09962 Uncharacterized conserved protein (DUF2196) ATR_RS00580 PF17954 Quercetinase C-terminal cupin domain ATR_RS00580 PF02678 Pirin ATR_RS00600 PF00266 Aminotransferase class-V ATR_RS00605 PF13393 Histidyl-tRNA synthetase ATR_RS00610 PF00709 Adenylosuccinate synthetase ATR_RS00620 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ATR_RS00620 PF00117 Glutamine amidotransferase class-I ATR_RS00645 PF00072 Response regulator receiver domain ATR_RS00645 PF00486 Transcriptional regulatory protein, C terminal ATR_RS00655 PF01063 Amino-transferase class IV ATR_RS00660 PF00425 chorismate binding enzyme ATR_RS00665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATR_RS00665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATR_RS00675 PF00202 Aminotransferase class-III ATR_RS00680 PF01252 Signal peptidase (SPase) II ATR_RS00685 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATR_RS00685 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATR_RS00685 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATR_RS00685 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATR_RS00690 PF01649 Ribosomal protein S20 ATR_RS00695 PF00472 RF-1 domain ATR_RS00695 PF03462 PCRF domain ATR_RS00700 PF04608 Phosphatidylglycerophosphatase A ATR_RS00705 PF00072 Response regulator receiver domain ATR_RS00705 PF00486 Transcriptional regulatory protein, C terminal ATR_RS00710 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ATR_RS00710 PF02542 YgbB family ATR_RS00720 PF01964 Radical SAM ThiC family ATR_RS00725 PF10609 NUBPL iron-transfer P-loop NTPase ATR_RS00725 PF01883 Iron-sulfur cluster assembly protein ATR_RS00735 PF00380 Ribosomal protein S9/S16 ATR_RS00740 PF00572 Ribosomal protein L13 ATR_RS00745 PF00989 PAS fold ATR_RS00745 PF00512 His Kinase A (phospho-acceptor) domain ATR_RS00745 PF16736 Single Cache-like ATR_RS00745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS00750 PF00486 Transcriptional regulatory protein, C terminal ATR_RS00750 PF00072 Response regulator receiver domain ATR_RS00765 PF00005 ABC transporter ATR_RS00770 PF00528 Binding-protein-dependent transport system inner membrane component ATR_RS00775 PF00528 Binding-protein-dependent transport system inner membrane component ATR_RS00780 PF00563 EAL domain ATR_RS00780 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS00780 PF03707 Bacterial signalling protein N terminal repeat ATR_RS00785 PF12849 PBP superfamily domain ATR_RS00790 PF08274 PhnA Zinc-Ribbon ATR_RS00790 PF03831 PhnA domain ATR_RS00805 PF03734 L,D-transpeptidase catalytic domain ATR_RS00805 PF17969 L,D-transpeptidase C-terminal domain ATR_RS00820 PF01171 PP-loop family ATR_RS00825 PF00919 Uncharacterized protein family UPF0004 ATR_RS00825 PF04055 Radical SAM superfamily ATR_RS00825 PF18693 TRAM domain ATR_RS00835 PF02569 Pantoate-beta-alanine ligase ATR_RS00840 PF00528 Binding-protein-dependent transport system inner membrane component ATR_RS00845 PF01648 4'-phosphopantetheinyl transferase superfamily ATR_RS00860 PF03616 Sodium/glutamate symporter ATR_RS00865 PF03652 Holliday junction resolvase ATR_RS00880 PF00923 Transaldolase/Fructose-6-phosphate aldolase ATR_RS00885 PF01474 Class-II DAHP synthetase family ATR_RS00890 PF04055 Radical SAM superfamily ATR_RS00900 PF00484 Carbonic anhydrase ATR_RS00905 PF00155 Aminotransferase class I and II ATR_RS00910 PF02021 Uncharacterised protein family UPF0102 ATR_RS00920 PF00391 PEP-utilising enzyme, mobile domain ATR_RS00920 PF00224 Pyruvate kinase, barrel domain ATR_RS00920 PF02887 Pyruvate kinase, alpha/beta domain ATR_RS00925 PF00672 HAMP domain ATR_RS00925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS00925 PF00512 His Kinase A (phospho-acceptor) domain ATR_RS00925 PF13426 PAS domain ATR_RS00930 PF00072 Response regulator receiver domain ATR_RS00930 PF00486 Transcriptional regulatory protein, C terminal ATR_RS00945 PF07195 Flagellar hook-associated protein 2 C-terminus ATR_RS00945 PF02465 Flagellar hook-associated protein 2 N-terminus ATR_RS00955 PF02107 Flagellar L-ring protein ATR_RS00980 PF01313 Bacterial export proteins, family 3 ATR_RS00990 PF02119 Flagellar P-ring protein ATR_RS00995 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ATR_RS00995 PF02154 Flagellar motor switch protein FliM ATR_RS01005 PF00543 Nitrogen regulatory protein P-II ATR_RS01010 PF00909 Ammonium Transporter Family ATR_RS01015 PF12796 Ankyrin repeats (3 copies) ATR_RS01015 PF13606 Ankyrin repeat ATR_RS01025 PF02040 Arsenical pump membrane protein ATR_RS01040 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ATR_RS01050 PF01451 Low molecular weight phosphotyrosine protein phosphatase ATR_RS01065 PF02780 Transketolase, C-terminal domain ATR_RS01065 PF02779 Transketolase, pyrimidine binding domain ATR_RS01065 PF00456 Transketolase, thiamine diphosphate binding domain ATR_RS01075 PF00512 His Kinase A (phospho-acceptor) domain ATR_RS01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS01080 PF00672 HAMP domain ATR_RS01080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS01080 PF02203 Tar ligand binding domain homologue ATR_RS01100 PF00682 HMGL-like ATR_RS01100 PF00364 Biotin-requiring enzyme ATR_RS01100 PF02436 Conserved carboxylase domain ATR_RS01130 PF05690 Thiazole biosynthesis protein ThiG ATR_RS01140 PF01256 Carbohydrate kinase ATR_RS01140 PF03853 YjeF-related protein N-terminus ATR_RS01150 PF00814 Glycoprotease family ATR_RS01165 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ATR_RS01165 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ATR_RS01165 PF13288 DXP reductoisomerase C-terminal domain ATR_RS01195 PF03129 Anticodon binding domain ATR_RS01195 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATR_RS01195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATR_RS01200 PF05198 Translation initiation factor IF-3, N-terminal domain ATR_RS01200 PF00707 Translation initiation factor IF-3, C-terminal domain ATR_RS01205 PF01632 Ribosomal protein L35 ATR_RS01210 PF00453 Ribosomal protein L20 ATR_RS01220 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATR_RS01225 PF12804 MobA-like NTP transferase domain ATR_RS01230 PF00330 Aconitase family (aconitate hydratase) ATR_RS01235 PF03960 ArsC family ATR_RS01240 PF04303 PrpF protein ATR_RS01245 PF00694 Aconitase C-terminal domain ATR_RS01245 PF00330 Aconitase family (aconitate hydratase) ATR_RS01250 PF00285 Citrate synthase, C-terminal domain ATR_RS01265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATR_RS01265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATR_RS01275 PF02666 Phosphatidylserine decarboxylase ATR_RS01280 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS01280 PF10442 FIST C domain ATR_RS01280 PF00563 EAL domain ATR_RS01280 PF08495 FIST N domain ATR_RS01295 PF18030 RimK PreATP-grasp domain ATR_RS01295 PF08443 RimK-like ATP-grasp domain ATR_RS01300 PF00085 Thioredoxin ATR_RS01305 PF00085 Thioredoxin ATR_RS01305 PF11412 Disulphide bond corrector protein DsbC ATR_RS01305 PF02683 Cytochrome C biogenesis protein transmembrane region ATR_RS01310 PF00939 Sodium:sulfate symporter transmembrane region ATR_RS01320 PF00877 NlpC/P60 family ATR_RS01330 PF02545 Maf-like protein ATR_RS01340 PF00034 Cytochrome c ATR_RS01340 PF03150 Di-haem cytochrome c peroxidase ATR_RS01345 PF02780 Transketolase, C-terminal domain ATR_RS01345 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ATR_RS01345 PF02779 Transketolase, pyrimidine binding domain ATR_RS01350 PF00155 Aminotransferase class I and II ATR_RS01355 PF00800 Prephenate dehydratase ATR_RS01355 PF01842 ACT domain ATR_RS01355 PF01817 Chorismate mutase type II ATR_RS01360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATR_RS01360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ATR_RS01370 PF00121 Triosephosphate isomerase ATR_RS01375 PF00162 Phosphoglycerate kinase ATR_RS01380 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ATR_RS01380 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATR_RS01385 PF01467 Cytidylyltransferase-like ATR_RS01395 PF03485 Arginyl tRNA synthetase N terminal domain ATR_RS01395 PF05746 DALR anticodon binding domain ATR_RS01395 PF00750 tRNA synthetases class I (R) ATR_RS01400 PF02416 mttA/Hcf106 family ATR_RS01405 PF02416 mttA/Hcf106 family ATR_RS01410 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ATR_RS01415 PF01553 Acyltransferase ATR_RS01430 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ATR_RS01435 PF01259 SAICAR synthetase ATR_RS01440 PF03572 Peptidase family S41 ATR_RS01440 PF13180 PDZ domain ATR_RS01450 PF15437 Plasminogen-binding protein pgbA C-terminal ATR_RS01455 PF01142 tRNA pseudouridine synthase D (TruD) ATR_RS01460 PF01258 Prokaryotic dksA/traR C4-type zinc finger ATR_RS01475 PF00005 ABC transporter ATR_RS01475 PF08402 TOBE domain ATR_RS01505 PF00920 Dehydratase family ATR_RS01510 PF17820 PDZ domain ATR_RS01510 PF13180 PDZ domain ATR_RS01515 PF00486 Transcriptional regulatory protein, C terminal ATR_RS01515 PF00072 Response regulator receiver domain ATR_RS01545 PF02272 DHHA1 domain ATR_RS01545 PF01411 tRNA synthetases class II (A) ATR_RS01545 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATR_RS01550 PF00085 Thioredoxin ATR_RS01555 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATR_RS01560 PF01113 Dihydrodipicolinate reductase, N-terminus ATR_RS01560 PF05173 Dihydrodipicolinate reductase, C-terminus ATR_RS01565 PF13537 Glutamine amidotransferase domain ATR_RS01565 PF00156 Phosphoribosyl transferase domain ATR_RS01570 PF16199 Radical_SAM C-terminal domain ATR_RS01570 PF04055 Radical SAM superfamily ATR_RS01575 PF03466 LysR substrate binding domain ATR_RS01575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATR_RS01580 PF00580 UvrD/REP helicase N-terminal domain ATR_RS01580 PF13361 UvrD-like helicase C-terminal domain ATR_RS01585 PF01509 TruB family pseudouridylate synthase (N terminal domain) ATR_RS01590 PF00288 GHMP kinases N terminal domain ATR_RS01595 PF01668 SmpB protein ATR_RS01600 PF00115 Cytochrome C and Quinol oxidase polypeptide I ATR_RS01615 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ATR_RS01615 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ATR_RS01640 PF00857 Isochorismatase family ATR_RS01645 PF01243 Pyridoxamine 5'-phosphate oxidase ATR_RS01650 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ATR_RS01650 PF03900 Porphobilinogen deaminase, C-terminal domain ATR_RS01660 PF12170 DNA polymerase III tau subunit V interacting with alpha ATR_RS01660 PF12169 DNA polymerase III subunits gamma and tau domain III ATR_RS01665 PF01177 Asp/Glu/Hydantoin racemase ATR_RS01675 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ATR_RS01675 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ATR_RS01680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATR_RS01680 PF07498 Rho termination factor, N-terminal domain ATR_RS01680 PF07497 Rho termination factor, RNA-binding domain ATR_RS01685 PF10417 C-terminal domain of 1-Cys peroxiredoxin ATR_RS01685 PF00578 AhpC/TSA family ATR_RS01695 PF00334 Nucleoside diphosphate kinase ATR_RS01705 PF01783 Ribosomal L32p protein family ATR_RS01710 PF02504 Fatty acid synthesis protein ATR_RS01715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATR_RS01715 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATR_RS01725 PF00350 Dynamin family ATR_RS01730 PF00350 Dynamin family ATR_RS01735 PF13085 2Fe-2S iron-sulfur cluster binding domain ATR_RS01735 PF13183 4Fe-4S dicluster domain ATR_RS01740 PF00890 FAD binding domain ATR_RS01740 PF02910 Fumarate reductase flavoprotein C-term ATR_RS01745 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ATR_RS01750 PF00361 Proton-conducting membrane transporter ATR_RS01755 PF00361 Proton-conducting membrane transporter ATR_RS01755 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ATR_RS01760 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATR_RS01760 PF00361 Proton-conducting membrane transporter ATR_RS01765 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ATR_RS01770 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ATR_RS01775 PF12838 4Fe-4S dicluster domain ATR_RS01780 PF00146 NADH dehydrogenase ATR_RS01785 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ATR_RS01785 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ATR_RS01785 PF00384 Molybdopterin oxidoreductase ATR_RS01790 PF00285 Citrate synthase, C-terminal domain ATR_RS01795 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ATR_RS01795 PF10531 SLBB domain ATR_RS01795 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ATR_RS01805 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ATR_RS01805 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ATR_RS01810 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ATR_RS01815 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ATR_RS01820 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ATR_RS01825 PF06738 Putative threonine/serine exporter ATR_RS01825 PF12821 Threonine/Serine exporter, ThrE ATR_RS01830 PF06738 Putative threonine/serine exporter ATR_RS01835 PF17674 HHH domain ATR_RS01835 PF00575 S1 RNA binding domain ATR_RS01835 PF09371 Tex-like protein N-terminal domain ATR_RS01835 PF16921 Tex protein YqgF-like domain ATR_RS01850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ATR_RS01850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ATR_RS01855 PF01551 Peptidase family M23 ATR_RS01855 PF01464 Transglycosylase SLT domain ATR_RS01855 PF10145 Phage-related minor tail protein ATR_RS01865 PF00586 AIR synthase related protein, N-terminal domain ATR_RS01865 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ATR_RS01865 PF02769 AIR synthase related protein, C-terminal domain ATR_RS01870 PF01808 AICARFT/IMPCHase bienzyme ATR_RS01870 PF02142 MGS-like domain ATR_RS01875 PF00512 His Kinase A (phospho-acceptor) domain ATR_RS01875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS01875 PF00989 PAS fold ATR_RS01875 PF08447 PAS fold ATR_RS01880 PF00202 Aminotransferase class-III ATR_RS01885 PF01641 SelR domain ATR_RS01890 PF01625 Peptide methionine sulfoxide reductase ATR_RS01910 PF03976 Polyphosphate kinase 2 (PPK2) ATR_RS01920 PF01264 Chorismate synthase ATR_RS01925 PF14622 Ribonuclease-III-like ATR_RS01925 PF00035 Double-stranded RNA binding motif ATR_RS01935 PF08275 DNA primase catalytic core, N-terminal domain ATR_RS01935 PF13662 Toprim domain ATR_RS01935 PF01807 CHC2 zinc finger ATR_RS01935 PF16730 DnaG-primase C-terminal, helicase-binding domain ATR_RS01950 PF00829 Ribosomal prokaryotic L21 protein ATR_RS01955 PF01016 Ribosomal L27 protein ATR_RS01960 PF01018 GTP1/OBG ATR_RS01960 PF01926 50S ribosome-binding GTPase ATR_RS01965 PF00696 Amino acid kinase family ATR_RS01970 PF02911 Formyl transferase, C-terminal domain ATR_RS01970 PF00551 Formyl transferase ATR_RS01990 PF13614 AAA domain ATR_RS01995 PF02195 ParB-like nuclease domain ATR_RS01995 PF17762 HTH domain found in ParB protein ATR_RS02005 PF00430 ATP synthase B/B' CF(0) ATR_RS02010 PF00213 ATP synthase delta (OSCP) subunit ATR_RS02015 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATR_RS02015 PF00306 ATP synthase alpha/beta chain, C terminal domain ATR_RS02015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATR_RS02020 PF00231 ATP synthase ATR_RS02025 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATR_RS02025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATR_RS02030 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ATR_RS02035 PF01618 MotA/TolQ/ExbB proton channel family ATR_RS02040 PF02472 Biopolymer transport protein ExbD/TolR ATR_RS02050 PF04052 TolB amino-terminal domain ATR_RS02065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATR_RS02070 PF00698 Acyl transferase domain ATR_RS02075 PF01048 Phosphorylase superfamily ATR_RS02080 PF10415 Fumarase C C-terminus ATR_RS02080 PF00206 Lyase ATR_RS02090 PF02810 SEC-C motif ATR_RS02095 PF02833 DHHA2 domain ATR_RS02095 PF01368 DHH family ATR_RS02100 PF00924 Mechanosensitive ion channel ATR_RS02110 PF00682 HMGL-like ATR_RS02110 PF08502 LeuA allosteric (dimerisation) domain ATR_RS02115 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATR_RS02115 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATR_RS02125 PF00491 Arginase family ATR_RS02130 PF01590 GAF domain ATR_RS02130 PF00563 EAL domain ATR_RS02130 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS02130 PF00360 Phytochrome region ATR_RS02140 PF04073 Aminoacyl-tRNA editing domain ATR_RS02170 PF04403 Paraquat-inducible protein A ATR_RS02180 PF06628 Catalase-related immune-responsive ATR_RS02180 PF00199 Catalase ATR_RS02185 PF00023 Ankyrin repeat ATR_RS02185 PF12796 Ankyrin repeats (3 copies) ATR_RS02195 PF00183 Hsp90 protein ATR_RS02210 PF00271 Helicase conserved C-terminal domain ATR_RS02210 PF03880 DbpA RNA binding domain ATR_RS02210 PF00270 DEAD/DEAH box helicase ATR_RS02215 PF00563 EAL domain ATR_RS02215 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS02215 PF03707 Bacterial signalling protein N terminal repeat ATR_RS02225 PF01545 Cation efflux family ATR_RS02225 PF16916 Dimerisation domain of Zinc Transporter ATR_RS02230 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ATR_RS02230 PF01243 Pyridoxamine 5'-phosphate oxidase ATR_RS02235 PF10442 FIST C domain ATR_RS02235 PF08495 FIST N domain ATR_RS02235 PF00563 EAL domain ATR_RS02235 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS02295 PF01297 Zinc-uptake complex component A periplasmic ATR_RS02295 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment ATR_RS02305 PF06965 Na+/H+ antiporter 1 ATR_RS02345 PF00696 Amino acid kinase family ATR_RS02350 PF01192 RNA polymerase Rpb6 ATR_RS02355 PF02824 TGS domain ATR_RS02355 PF04607 Region found in RelA / SpoT proteins ATR_RS02355 PF13291 ACT domain ATR_RS02360 PF00579 tRNA synthetases class I (W and Y) ATR_RS02360 PF01479 S4 domain ATR_RS02370 PF01520 N-acetylmuramoyl-L-alanine amidase ATR_RS02385 PF01195 Peptidyl-tRNA hydrolase ATR_RS02390 PF14693 Ribosomal protein TL5, C-terminal domain ATR_RS02390 PF01386 Ribosomal L25p family ATR_RS02395 PF01384 Phosphate transporter family ATR_RS02405 PF00793 DAHP synthetase I family ATR_RS02410 PF00892 EamA-like transporter family ATR_RS02415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATR_RS02425 PF03631 Virulence factor BrkB ATR_RS02430 PF02913 FAD linked oxidases, C-terminal domain ATR_RS02430 PF01565 FAD binding domain ATR_RS02440 PF00578 AhpC/TSA family ATR_RS02445 PF13649 Methyltransferase domain ATR_RS02450 PF01687 Riboflavin kinase ATR_RS02450 PF06574 FAD synthetase ATR_RS02455 PF01728 FtsJ-like methyltransferase ATR_RS02455 PF01479 S4 domain ATR_RS02465 PF01205 Uncharacterized protein family UPF0029 ATR_RS02465 PF09186 Domain of unknown function (DUF1949) ATR_RS02470 PF03958 Bacterial type II/III secretion system short domain ATR_RS02470 PF00263 Bacterial type II and III secretion system protein ATR_RS02485 PF00459 Inositol monophosphatase family ATR_RS02490 PF00037 4Fe-4S binding domain ATR_RS02500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ATR_RS02515 PF01219 Prokaryotic diacylglycerol kinase ATR_RS02520 PF00884 Sulfatase ATR_RS02525 PF00483 Nucleotidyl transferase ATR_RS02530 PF16363 GDP-mannose 4,6 dehydratase ATR_RS02535 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATR_RS02545 PF01467 Cytidylyltransferase-like ATR_RS02560 PF01501 Glycosyl transferase family 8 ATR_RS02560 PF00535 Glycosyl transferase family 2 ATR_RS02565 PF00884 Sulfatase ATR_RS02580 PF00535 Glycosyl transferase family 2 ATR_RS02600 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ATR_RS02605 PF00884 Sulfatase ATR_RS02605 PF08019 Phosphoethanolamine transferase EptA/EptB ATR_RS02615 PF00884 Sulfatase ATR_RS02620 PF13580 SIS domain ATR_RS02625 PF01467 Cytidylyltransferase-like ATR_RS02625 PF00294 pfkB family carbohydrate kinase ATR_RS02630 PF01370 NAD dependent epimerase/dehydratase family ATR_RS02635 PF08645 Polynucleotide kinase 3 phosphatase ATR_RS02645 PF00830 Ribosomal L28 family ATR_RS02655 PF01960 ArgJ family ATR_RS02665 PF03989 DNA gyrase C-terminal domain, beta-propeller ATR_RS02665 PF00521 DNA gyrase/topoisomerase IV, subunit A ATR_RS02670 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATR_RS02670 PF02774 Semialdehyde dehydrogenase, dimerisation domain ATR_RS02680 PF01208 Uroporphyrinogen decarboxylase (URO-D) ATR_RS02725 PF05231 MASE1 ATR_RS02725 PF00563 EAL domain ATR_RS02730 PF00403 Heavy-metal-associated domain ATR_RS02740 PF00034 Cytochrome c ATR_RS02760 PF00005 ABC transporter ATR_RS02765 PF00528 Binding-protein-dependent transport system inner membrane component ATR_RS02770 PF00528 Binding-protein-dependent transport system inner membrane component ATR_RS02775 PF12849 PBP superfamily domain ATR_RS02780 PF01965 DJ-1/PfpI family ATR_RS02795 PF01435 Peptidase family M48 ATR_RS02795 PF07720 Tetratricopeptide repeat ATR_RS02870 PF01327 Polypeptide deformylase ATR_RS02875 PF00574 Clp protease ATR_RS02880 PF05697 Bacterial trigger factor protein (TF) ATR_RS02880 PF05698 Bacterial trigger factor protein (TF) C-terminus ATR_RS02880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATR_RS02885 PF03976 Polyphosphate kinase 2 (PPK2) ATR_RS02890 PF03976 Polyphosphate kinase 2 (PPK2) ATR_RS02895 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ATR_RS02900 PF03435 Saccharopine dehydrogenase NADP binding domain ATR_RS02900 PF16653 Saccharopine dehydrogenase C-terminal domain ATR_RS02905 PF13335 Magnesium chelatase, subunit ChlI C-terminal ATR_RS02905 PF01078 Magnesium chelatase, subunit ChlI ATR_RS02935 PF07669 Eco57I restriction-modification methylase ATR_RS02940 PF07669 Eco57I restriction-modification methylase ATR_RS02940 PF02384 N-6 DNA Methylase ATR_RS02975 PF17871 AAA lid domain ATR_RS02975 PF00004 ATPase family associated with various cellular activities (AAA) ATR_RS02975 PF10431 C-terminal, D2-small domain, of ClpB protein ATR_RS02975 PF07724 AAA domain (Cdc48 subfamily) ATR_RS02980 PF00665 Integrase core domain ATR_RS02990 PF01078 Magnesium chelatase, subunit ChlI ATR_RS02990 PF13335 Magnesium chelatase, subunit ChlI C-terminal ATR_RS03010 PF02568 Thiamine biosynthesis protein (ThiI) ATR_RS03010 PF02926 THUMP domain ATR_RS03015 PF03372 Endonuclease/Exonuclease/phosphatase family ATR_RS03035 PF04101 Glycosyltransferase family 28 C-terminal domain ATR_RS03035 PF03033 Glycosyltransferase family 28 N-terminal domain ATR_RS03040 PF01098 Cell cycle protein ATR_RS03045 PF00905 Penicillin binding protein transpeptidase domain ATR_RS03045 PF03717 Penicillin-binding Protein dimerisation domain ATR_RS03045 PF03793 PASTA domain ATR_RS03050 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ATR_RS03055 PF03150 Di-haem cytochrome c peroxidase ATR_RS03060 PF04116 Fatty acid hydroxylase superfamily ATR_RS03085 PF00137 ATP synthase subunit C ATR_RS03100 PF00005 ABC transporter ATR_RS03105 PF00528 Binding-protein-dependent transport system inner membrane component ATR_RS03110 PF00005 ABC transporter ATR_RS03110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATR_RS03115 PF00762 Ferrochelatase ATR_RS03150 PF17805 AsnC-like ligand binding domain ATR_RS03155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATR_RS03155 PF14824 Sirohaem biosynthesis protein central ATR_RS03155 PF10414 Sirohaem synthase dimerisation region ATR_RS03165 PF10414 Sirohaem synthase dimerisation region ATR_RS03165 PF14824 Sirohaem biosynthesis protein central ATR_RS03165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATR_RS03175 PF04055 Radical SAM superfamily ATR_RS03175 PF13186 Iron-sulfur cluster-binding domain ATR_RS03195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ATR_RS03200 PF00115 Cytochrome C and Quinol oxidase polypeptide I ATR_RS03205 PF00034 Cytochrome c ATR_RS03220 PF01875 Memo-like protein ATR_RS03225 PF02698 DUF218 domain ATR_RS03240 PF00005 ABC transporter ATR_RS03245 PF00950 ABC 3 transport family ATR_RS03250 PF13509 S1 domain ATR_RS03250 PF17783 CvfB-like winged helix domain ATR_RS03255 PF08534 Redoxin ATR_RS03260 PF08238 Sel1 repeat ATR_RS03275 PF00133 tRNA synthetases class I (I, L, M and V) ATR_RS03275 PF08264 Anticodon-binding domain of tRNA ATR_RS03275 PF10458 Valyl tRNA synthetase tRNA binding arm ATR_RS03285 PF13426 PAS domain ATR_RS03285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS03285 PF08447 PAS fold ATR_RS03295 PF07690 Major Facilitator Superfamily ATR_RS03300 PF01725 Ham1 family ATR_RS03320 PF03807 NADP oxidoreductase coenzyme F420-dependent ATR_RS03320 PF14748 Pyrroline-5-carboxylate reductase dimerisation ATR_RS03325 PF13525 Outer membrane lipoprotein ATR_RS03330 PF00004 ATPase family associated with various cellular activities (AAA) ATR_RS03330 PF05362 Lon protease (S16) C-terminal proteolytic domain ATR_RS03330 PF02190 ATP-dependent protease La (LON) substrate-binding domain ATR_RS03355 PF02785 Biotin carboxylase C-terminal domain ATR_RS03355 PF00289 Biotin carboxylase, N-terminal domain ATR_RS03355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATR_RS03360 PF01883 Iron-sulfur cluster assembly protein ATR_RS03365 PF02657 Fe-S metabolism associated domain ATR_RS03370 PF00266 Aminotransferase class-V ATR_RS03375 PF01458 Uncharacterized protein family (UPF0051) ATR_RS03380 PF00005 ABC transporter ATR_RS03385 PF01458 Uncharacterized protein family (UPF0051) ATR_RS03390 PF01106 NifU-like domain ATR_RS03390 PF04324 BFD-like [2Fe-2S] binding domain ATR_RS03390 PF01592 NifU-like N terminal domain ATR_RS03395 PF01769 Divalent cation transporter ATR_RS03395 PF03448 MgtE intracellular N domain ATR_RS03395 PF00571 CBS domain ATR_RS03400 PF07694 5TMR of 5TMR-LYT ATR_RS03400 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS03405 PF00206 Lyase ATR_RS03405 PF14698 Argininosuccinate lyase C-terminal ATR_RS03410 PF02151 UvrB/uvrC motif ATR_RS03410 PF00271 Helicase conserved C-terminal domain ATR_RS03410 PF04851 Type III restriction enzyme, res subunit ATR_RS03410 PF12344 Ultra-violet resistance protein B ATR_RS03410 PF17757 UvrB interaction domain ATR_RS03420 PF01272 Transcription elongation factor, GreA/GreB, C-term ATR_RS03420 PF03449 Transcription elongation factor, N-terminal ATR_RS03425 PF00899 ThiF family ATR_RS03430 PF00072 Response regulator receiver domain ATR_RS03430 PF01584 CheW-like domain ATR_RS03440 PF00589 Phage integrase family ATR_RS03440 PF14659 Phage integrase, N-terminal SAM-like domain ATR_RS03510 PF00145 C-5 cytosine-specific DNA methylase ATR_RS03515 PF02203 Tar ligand binding domain homologue ATR_RS03515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS03515 PF00672 HAMP domain ATR_RS03560 PF02661 Fic/DOC family ATR_RS03570 PF01131 DNA topoisomerase ATR_RS03570 PF01751 Toprim domain ATR_RS03625 PF02534 Type IV secretory system Conjugative DNA transfer ATR_RS03630 PF00437 Type II/IV secretion system protein ATR_RS03635 PF03743 Bacterial conjugation TrbI-like protein ATR_RS03640 PF03524 Conjugal transfer protein ATR_RS03680 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ATR_RS03695 PF00730 HhH-GPD superfamily base excision DNA repair protein ATR_RS03695 PF00633 Helix-hairpin-helix motif ATR_RS03695 PF10576 Iron-sulfur binding domain of endonuclease III ATR_RS03700 PF02769 AIR synthase related protein, C-terminal domain ATR_RS03700 PF00586 AIR synthase related protein, N-terminal domain ATR_RS03705 PF01142 tRNA pseudouridine synthase D (TruD) ATR_RS03715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS03715 PF00672 HAMP domain ATR_RS03715 PF02203 Tar ligand binding domain homologue ATR_RS03720 PF01330 RuvA N terminal domain ATR_RS03720 PF07499 RuvA, C-terminal domain ATR_RS03725 PF01820 D-ala D-ala ligase N-terminus ATR_RS03725 PF07478 D-ala D-ala ligase C-terminus ATR_RS03735 PF08245 Mur ligase middle domain ATR_RS03735 PF02875 Mur ligase family, glutamate ligase domain ATR_RS03750 PF00338 Ribosomal protein S10p/S20e ATR_RS03755 PF00297 Ribosomal protein L3 ATR_RS03760 PF00573 Ribosomal protein L4/L1 family ATR_RS03765 PF00276 Ribosomal protein L23 ATR_RS03770 PF00181 Ribosomal Proteins L2, RNA binding domain ATR_RS03770 PF03947 Ribosomal Proteins L2, C-terminal domain ATR_RS03775 PF00203 Ribosomal protein S19 ATR_RS03780 PF00237 Ribosomal protein L22p/L17e ATR_RS03785 PF07650 KH domain ATR_RS03785 PF00189 Ribosomal protein S3, C-terminal domain ATR_RS03790 PF00252 Ribosomal protein L16p/L10e ATR_RS03795 PF00831 Ribosomal L29 protein ATR_RS03800 PF00366 Ribosomal protein S17 ATR_RS03805 PF00238 Ribosomal protein L14p/L23e ATR_RS03810 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ATR_RS03810 PF00467 KOW motif ATR_RS03815 PF00281 Ribosomal protein L5 ATR_RS03815 PF00673 ribosomal L5P family C-terminus ATR_RS03820 PF00253 Ribosomal protein S14p/S29e ATR_RS03825 PF00410 Ribosomal protein S8 ATR_RS03830 PF00347 Ribosomal protein L6 ATR_RS03835 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ATR_RS03840 PF03719 Ribosomal protein S5, C-terminal domain ATR_RS03840 PF00333 Ribosomal protein S5, N-terminal domain ATR_RS03845 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ATR_RS03850 PF00344 SecY translocase ATR_RS03855 PF00557 Metallopeptidase family M24 ATR_RS03860 PF01176 Translation initiation factor 1A / IF-1 ATR_RS03865 PF03167 Uracil DNA glycosylase superfamily ATR_RS03875 PF00152 tRNA synthetases class II (D, K and N) ATR_RS03875 PF01336 OB-fold nucleic acid binding domain ATR_RS03875 PF02938 GAD domain ATR_RS03880 PF08497 Radical SAM N-terminal ATR_RS03880 PF04055 Radical SAM superfamily ATR_RS03885 PF05191 Adenylate kinase, active site lid ATR_RS03905 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ATR_RS03905 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ATR_RS03905 PF02805 Metal binding domain of Ada ATR_RS03905 PF12833 Helix-turn-helix domain ATR_RS03910 PF00464 Serine hydroxymethyltransferase ATR_RS03925 PF00571 CBS domain ATR_RS03925 PF03471 Transporter associated domain ATR_RS03950 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATR_RS03950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATR_RS03955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATR_RS03955 PF00364 Biotin-requiring enzyme ATR_RS03955 PF02817 e3 binding domain ATR_RS03960 PF17831 Pyruvate dehydrogenase E1 component middle domain ATR_RS03960 PF00456 Transketolase, thiamine diphosphate binding domain ATR_RS03965 PF10437 Bacterial lipoate protein ligase C-terminus ATR_RS03965 PF03099 Biotin/lipoate A/B protein ligase family ATR_RS03970 PF04055 Radical SAM superfamily ATR_RS03980 PF08448 PAS fold ATR_RS03980 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS03985 PF12848 ABC transporter ATR_RS03985 PF00005 ABC transporter ATR_RS03985 PF16326 ABC transporter C-terminal domain ATR_RS03990 PF03475 3-alpha domain ATR_RS03990 PF03473 MOSC domain ATR_RS04000 PF10518 TAT (twin-arginine translocation) pathway signal sequence ATR_RS04000 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding ATR_RS04000 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATR_RS04010 PF00817 impB/mucB/samB family ATR_RS04010 PF11799 impB/mucB/samB family C-terminal domain ATR_RS04010 PF11798 IMS family HHH motif ATR_RS04020 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain ATR_RS04020 PF13538 UvrD-like helicase C-terminal domain ATR_RS04020 PF14490 Helix-hairpin-helix containing domain ATR_RS04030 PF02491 SHS2 domain inserted in FTSA ATR_RS04035 PF12327 FtsZ family, C-terminal domain ATR_RS04035 PF00091 Tubulin/FtsZ family, GTPase domain ATR_RS04050 PF00561 alpha/beta hydrolase fold ATR_RS04055 PF02609 Exonuclease VII small subunit ATR_RS04060 PF02142 MGS-like domain ATR_RS04060 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATR_RS04060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATR_RS04070 PF00490 Delta-aminolevulinic acid dehydratase ATR_RS04075 PF00925 GTP cyclohydrolase II ATR_RS04080 PF02527 rRNA small subunit methyltransferase G ATR_RS04095 PF02092 Glycyl-tRNA synthetase beta subunit ATR_RS04100 PF14743 DNA ligase OB-like domain ATR_RS04100 PF01068 ATP dependent DNA ligase domain ATR_RS04105 PF04542 Sigma-70 region 2 ATR_RS04105 PF04545 Sigma-70, region 4 ATR_RS04105 PF04539 Sigma-70 region 3 ATR_RS04105 PF00140 Sigma-70 factor, region 1.2 ATR_RS04110 PF00694 Aconitase C-terminal domain ATR_RS04115 PF00180 Isocitrate/isopropylmalate dehydrogenase ATR_RS04130 PF00444 Ribosomal protein L36 ATR_RS04135 PF00416 Ribosomal protein S13/S18 ATR_RS04140 PF00411 Ribosomal protein S11 ATR_RS04145 PF00163 Ribosomal protein S4/S9 N-terminal domain ATR_RS04145 PF01479 S4 domain ATR_RS04150 PF01000 RNA polymerase Rpb3/RpoA insert domain ATR_RS04150 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ATR_RS04150 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ATR_RS04155 PF01196 Ribosomal protein L17 ATR_RS04160 PF01425 Amidase ATR_RS04165 PF00478 IMP dehydrogenase / GMP reductase domain ATR_RS04165 PF00571 CBS domain ATR_RS04170 PF01594 AI-2E family transporter ATR_RS04175 PF05491 RuvB C-terminal winged helix domain ATR_RS04175 PF17864 RuvB AAA lid domain ATR_RS04175 PF05496 Holliday junction DNA helicase RuvB P-loop domain ATR_RS04180 PF02548 Ketopantoate hydroxymethyltransferase ATR_RS04185 PF00290 Tryptophan synthase alpha chain ATR_RS04190 PF04377 Arginine-tRNA-protein transferase, C terminus ATR_RS04190 PF04376 Arginine-tRNA-protein transferase, N terminus ATR_RS04200 PF07664 Ferrous iron transport protein B C terminus ATR_RS04200 PF02421 Ferrous iron transport protein B ATR_RS04200 PF07670 Nucleoside recognition ATR_RS04210 PF01475 Ferric uptake regulator family ATR_RS04215 PF00764 Arginosuccinate synthase ATR_RS04220 PF00528 Binding-protein-dependent transport system inner membrane component ATR_RS04220 PF12911 N-terminal TM domain of oligopeptide transport permease C ATR_RS04230 PF01966 HD domain ATR_RS04230 PF00013 KH domain ATR_RS04230 PF12072 Domain of unknown function (DUF3552) ATR_RS04235 PF01812 5-formyltetrahydrofolate cyclo-ligase family ATR_RS04245 PF00448 SRP54-type protein, GTPase domain ATR_RS04265 PF02525 Flavodoxin-like fold ATR_RS04270 PF00881 Nitroreductase family ATR_RS04280 PF00005 ABC transporter ATR_RS04280 PF12848 ABC transporter ATR_RS04285 PF03061 Thioesterase superfamily ATR_RS04290 PF12826 Helix-hairpin-helix motif ATR_RS04290 PF00533 BRCA1 C Terminus (BRCT) domain ATR_RS04290 PF03120 NAD-dependent DNA ligase OB-fold domain ATR_RS04290 PF01653 NAD-dependent DNA ligase adenylation domain ATR_RS04305 PF03738 Glutathionylspermidine synthase preATP-grasp ATR_RS04315 PF00270 DEAD/DEAH box helicase ATR_RS04315 PF00271 Helicase conserved C-terminal domain ATR_RS04320 PF05736 OprF membrane domain ATR_RS04320 PF00691 OmpA family ATR_RS04325 PF03412 Peptidase C39 family ATR_RS04325 PF00005 ABC transporter ATR_RS04325 PF00664 ABC transporter transmembrane region ATR_RS04330 PF13533 Biotin-lipoyl like ATR_RS04335 PF00196 Bacterial regulatory proteins, luxR family ATR_RS04335 PF17874 MalT-like TPR region ATR_RS04340 PF01293 Phosphoenolpyruvate carboxykinase ATR_RS04355 PF00133 tRNA synthetases class I (I, L, M and V) ATR_RS04355 PF09334 tRNA synthetases class I (M) ATR_RS04355 PF01588 Putative tRNA binding domain ATR_RS04365 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ATR_RS04390 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATR_RS04395 PF05193 Peptidase M16 inactive domain ATR_RS04400 PF04055 Radical SAM superfamily ATR_RS04405 PF07244 Surface antigen variable number repeat ATR_RS04405 PF01103 Surface antigen ATR_RS04410 PF02153 Prephenate dehydrogenase ATR_RS04410 PF01842 ACT domain ATR_RS04420 PF03144 Elongation factor Tu domain 2 ATR_RS04420 PF00009 Elongation factor Tu GTP binding domain ATR_RS04420 PF09106 Elongation factor SelB, winged helix ATR_RS04420 PF09107 Elongation factor SelB, winged helix ATR_RS04420 PF09105 Elongation factor SelB, winged helix ATR_RS04425 PF03841 L-seryl-tRNA selenium transferase ATR_RS04435 PF02253 Phospholipase A1 ATR_RS04440 PF00834 Ribulose-phosphate 3 epimerase family ATR_RS04445 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ATR_RS04450 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATR_RS04450 PF14480 DNA polymerase III polC-type N-terminus I ATR_RS04450 PF11490 DNA polymerase III polC-type N-terminus II ATR_RS04450 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATR_RS04450 PF14579 Helix-hairpin-helix motif ATR_RS04450 PF02811 PHP domain ATR_RS04450 PF00929 Exonuclease ATR_RS04455 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATR_RS04460 PF17755 UvrA DNA-binding domain ATR_RS04460 PF00005 ABC transporter ATR_RS04460 PF17760 UvrA interaction domain ATR_RS04465 PF10442 FIST C domain ATR_RS04465 PF08495 FIST N domain ATR_RS04465 PF00563 EAL domain ATR_RS04465 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS04475 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATR_RS04480 PF00561 alpha/beta hydrolase fold ATR_RS04495 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ATR_RS04500 PF00117 Glutamine amidotransferase class-I ATR_RS04500 PF00958 GMP synthase C terminal domain ATR_RS04500 PF02540 NAD synthase ATR_RS04505 PF02910 Fumarate reductase flavoprotein C-term ATR_RS04505 PF00890 FAD binding domain ATR_RS04515 PF01863 Protein of unknown function DUF45 ATR_RS04520 PF00155 Aminotransferase class I and II ATR_RS04525 PF01966 HD domain ATR_RS04530 PF00211 Adenylate and Guanylate cyclase catalytic domain ATR_RS04555 PF03062 MBOAT, membrane-bound O-acyltransferase family ATR_RS04565 PF00999 Sodium/hydrogen exchanger family ATR_RS04565 PF02254 TrkA-N domain ATR_RS04575 PF02600 Disulfide bond formation protein DsbB ATR_RS04590 PF08534 Redoxin ATR_RS04595 PF18764 Nitrous oxide reductase propeller repeat ATR_RS04595 PF18793 Nitrous oxide reductase propeller repeat 2 ATR_RS04595 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ATR_RS04610 PF12800 4Fe-4S binding domain ATR_RS04610 PF12838 4Fe-4S dicluster domain ATR_RS04625 PF00037 4Fe-4S binding domain ATR_RS04625 PF12801 4Fe-4S binding domain ATR_RS04630 PF00005 ABC transporter ATR_RS04650 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ATR_RS04655 PF01479 S4 domain ATR_RS04655 PF00849 RNA pseudouridylate synthase ATR_RS04660 PF13419 Haloacid dehalogenase-like hydrolase ATR_RS04680 PF07715 TonB-dependent Receptor Plug Domain ATR_RS04680 PF00593 TonB dependent receptor ATR_RS04685 PF01497 Periplasmic binding protein ATR_RS04690 PF00005 ABC transporter ATR_RS04695 PF01032 FecCD transport family ATR_RS04715 PF01761 3-dehydroquinate synthase ATR_RS04725 PF04055 Radical SAM superfamily ATR_RS04725 PF00919 Uncharacterized protein family UPF0004 ATR_RS04730 PF06480 FtsH Extracellular ATR_RS04730 PF01434 Peptidase family M41 ATR_RS04730 PF00004 ATPase family associated with various cellular activities (AAA) ATR_RS04730 PF17862 AAA+ lid domain ATR_RS04740 PF00994 Probable molybdopterin binding domain ATR_RS04745 PF08338 Domain of unknown function (DUF1731) ATR_RS04745 PF01370 NAD dependent epimerase/dehydratase family ATR_RS04750 PF03441 FAD binding domain of DNA photolyase ATR_RS04750 PF00875 DNA photolyase ATR_RS04760 PF02687 FtsX-like permease family ATR_RS04760 PF12704 MacB-like periplasmic core domain ATR_RS04765 PF00271 Helicase conserved C-terminal domain ATR_RS04765 PF02810 SEC-C motif ATR_RS04765 PF07516 SecA Wing and Scaffold domain ATR_RS04765 PF01043 SecA preprotein cross-linking domain ATR_RS04765 PF07517 SecA DEAD-like domain ATR_RS04770 PF03548 Outer membrane lipoprotein carrier protein LolA ATR_RS04780 PF01546 Peptidase family M20/M25/M40 ATR_RS04780 PF07687 Peptidase dimerisation domain ATR_RS04785 PF01578 Cytochrome C assembly protein ATR_RS04785 PF05140 ResB-like family ATR_RS04795 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS04800 PF08003 Protein of unknown function (DUF1698) ATR_RS04805 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS04805 PF01590 GAF domain ATR_RS04805 PF00563 EAL domain ATR_RS04805 PF00360 Phytochrome region ATR_RS04815 PF00753 Metallo-beta-lactamase superfamily ATR_RS04835 PF01556 DnaJ C terminal domain ATR_RS04835 PF00684 DnaJ central domain ATR_RS04835 PF00226 DnaJ domain ATR_RS04840 PF00589 Phage integrase family ATR_RS04840 PF18644 Phage integrase SAM-like domain ATR_RS04845 PF00072 Response regulator receiver domain ATR_RS04845 PF01339 CheB methylesterase ATR_RS04850 PF03975 CheD chemotactic sensory transduction ATR_RS04855 PF03705 CheR methyltransferase, all-alpha domain ATR_RS04855 PF01739 CheR methyltransferase, SAM binding domain ATR_RS04860 PF01584 CheW-like domain ATR_RS04860 PF01627 Hpt domain ATR_RS04860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS04860 PF09078 CheY binding ATR_RS04860 PF02895 Signal transducing histidine kinase, homodimeric domain ATR_RS04865 PF00072 Response regulator receiver domain ATR_RS04870 PF01138 3' exoribonuclease family, domain 1 ATR_RS04870 PF00013 KH domain ATR_RS04870 PF00575 S1 RNA binding domain ATR_RS04870 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ATR_RS04870 PF03725 3' exoribonuclease family, domain 2 ATR_RS04880 PF03968 OstA-like protein ATR_RS04880 PF04453 LPS transport system D ATR_RS04890 PF02843 Phosphoribosylglycinamide synthetase, C domain ATR_RS04890 PF02844 Phosphoribosylglycinamide synthetase, N domain ATR_RS04890 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATR_RS04900 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ATR_RS04900 PF01926 50S ribosome-binding GTPase ATR_RS04905 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ATR_RS04905 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ATR_RS04910 PF01580 FtsK/SpoIIIE family ATR_RS04910 PF09397 Ftsk gamma domain ATR_RS04910 PF17854 FtsK alpha domain ATR_RS04915 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ATR_RS04915 PF00132 Bacterial transferase hexapeptide (six repeats) ATR_RS04920 PF10369 Small subunit of acetolactate synthase ATR_RS04925 PF00205 Thiamine pyrophosphate enzyme, central domain ATR_RS04925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATR_RS04925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATR_RS04935 PF03630 Fumble ATR_RS04940 PF01066 CDP-alcohol phosphatidyltransferase ATR_RS04960 PF01171 PP-loop family ATR_RS04970 PF03454 MoeA C-terminal region (domain IV) ATR_RS04970 PF00994 Probable molybdopterin binding domain ATR_RS04970 PF03453 MoeA N-terminal region (domain I and II) ATR_RS04980 PF04228 Putative neutral zinc metallopeptidase ATR_RS04985 PF02646 RmuC family ATR_RS04990 PF01435 Peptidase family M48 ATR_RS04990 PF16491 CAAX prenyl protease N-terminal, five membrane helices ATR_RS05000 PF03061 Thioesterase superfamily ATR_RS05015 PF01432 Peptidase family M3 ATR_RS05020 PF05175 Methyltransferase small domain ATR_RS05020 PF17827 PrmC N-terminal domain ATR_RS05025 PF04055 Radical SAM superfamily ATR_RS05025 PF06969 HemN C-terminal domain ATR_RS05030 PF00293 NUDIX domain ATR_RS05035 PF00696 Amino acid kinase family ATR_RS05035 PF13840 ACT domain ATR_RS05035 PF01842 ACT domain ATR_RS05050 PF00809 Pterin binding enzyme ATR_RS05065 PF03477 ATP cone domain ATR_RS05065 PF02867 Ribonucleotide reductase, barrel domain ATR_RS05065 PF00317 Ribonucleotide reductase, all-alpha domain ATR_RS05070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATR_RS05070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATR_RS05075 PF06969 HemN C-terminal domain ATR_RS05075 PF04055 Radical SAM superfamily ATR_RS05085 PF01113 Dihydrodipicolinate reductase, N-terminus ATR_RS05085 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain ATR_RS05090 PF00005 ABC transporter ATR_RS05100 PF03471 Transporter associated domain ATR_RS05100 PF01595 Cyclin M transmembrane N-terminal domain ATR_RS05100 PF00571 CBS domain ATR_RS05105 PF00488 MutS domain V ATR_RS05105 PF01713 Smr domain ATR_RS05120 PF03971 Monomeric isocitrate dehydrogenase ATR_RS05125 PF00056 lactate/malate dehydrogenase, NAD binding domain ATR_RS05125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ATR_RS05150 PF01795 MraW methylase family ATR_RS05160 PF00216 Bacterial DNA-binding protein ATR_RS05180 PF00072 Response regulator receiver domain ATR_RS05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS05190 PF08448 PAS fold ATR_RS05190 PF08447 PAS fold ATR_RS05195 PF01556 DnaJ C terminal domain ATR_RS05195 PF00226 DnaJ domain ATR_RS05200 PF13411 MerR HTH family regulatory protein ATR_RS05205 PF03741 Integral membrane protein TerC family ATR_RS05210 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ATR_RS05215 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATR_RS05220 PF02540 NAD synthase ATR_RS05235 PF05099 Tellurite resistance protein TerB ATR_RS05235 PF00226 DnaJ domain ATR_RS05245 PF02547 Queuosine biosynthesis protein ATR_RS05250 PF00902 Sec-independent protein translocase protein (TatC) ATR_RS05255 PF02416 mttA/Hcf106 family ATR_RS05260 PF00248 Aldo/keto reductase family ATR_RS05285 PF13662 Toprim domain ATR_RS05285 PF02132 RecR protein ATR_RS05290 PF00005 ABC transporter ATR_RS05290 PF12848 ABC transporter ATR_RS05290 PF16326 ABC transporter C-terminal domain ATR_RS05300 PF01551 Peptidase family M23 ATR_RS05300 PF04225 Opacity-associated protein A LysM-like domain ATR_RS05310 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS05315 PF01361 Tautomerase enzyme ATR_RS05320 PF03466 LysR substrate binding domain ATR_RS05320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATR_RS05325 PF00218 Indole-3-glycerol phosphate synthase ATR_RS05335 PF03692 Putative zinc- or iron-chelating domain ATR_RS05340 PF05175 Methyltransferase small domain ATR_RS05350 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ATR_RS05350 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ATR_RS05350 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ATR_RS05355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATR_RS05365 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ATR_RS05365 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ATR_RS05375 PF00476 DNA polymerase family A ATR_RS05375 PF01367 5'-3' exonuclease, C-terminal SAM fold ATR_RS05375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ATR_RS05380 PF18073 Rubredoxin metal binding domain ATR_RS05390 PF02130 Uncharacterized protein family UPF0054 ATR_RS05395 PF01475 Ferric uptake regulator family ATR_RS05405 PF03023 Lipid II flippase MurJ ATR_RS05410 PF00005 ABC transporter ATR_RS05410 PF00664 ABC transporter transmembrane region ATR_RS05415 PF01180 Dihydroorotate dehydrogenase ATR_RS05425 PF00701 Dihydrodipicolinate synthetase family ATR_RS05435 PF01066 CDP-alcohol phosphatidyltransferase ATR_RS05440 PF17820 PDZ domain ATR_RS05440 PF02163 Peptidase family M50 ATR_RS05445 PF01168 Alanine racemase, N-terminal domain ATR_RS05450 PF00672 HAMP domain ATR_RS05450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS05450 PF02203 Tar ligand binding domain homologue ATR_RS05455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS05455 PF08447 PAS fold ATR_RS05465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS05470 PF00486 Transcriptional regulatory protein, C terminal ATR_RS05470 PF00072 Response regulator receiver domain ATR_RS05480 PF00005 ABC transporter ATR_RS05480 PF00664 ABC transporter transmembrane region ATR_RS05495 PF12823 Domain of unknown function (DUF3817) ATR_RS05505 PF00994 Probable molybdopterin binding domain ATR_RS05505 PF03453 MoeA N-terminal region (domain I and II) ATR_RS05505 PF03454 MoeA C-terminal region (domain IV) ATR_RS05510 PF00266 Aminotransferase class-V ATR_RS05515 PF02634 FdhD/NarQ family ATR_RS05525 PF13247 4Fe-4S dicluster domain ATR_RS05555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS05555 PF00512 His Kinase A (phospho-acceptor) domain ATR_RS05560 PF00158 Sigma-54 interaction domain ATR_RS05560 PF00072 Response regulator receiver domain ATR_RS05565 PF02769 AIR synthase related protein, C-terminal domain ATR_RS05565 PF00586 AIR synthase related protein, N-terminal domain ATR_RS05570 PF13361 UvrD-like helicase C-terminal domain ATR_RS05570 PF00580 UvrD/REP helicase N-terminal domain ATR_RS05575 PF02254 TrkA-N domain ATR_RS05575 PF02080 TrkA-C domain ATR_RS05575 PF00999 Sodium/hydrogen exchanger family ATR_RS05580 PF00174 Oxidoreductase molybdopterin binding domain ATR_RS05585 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ATR_RS05655 PF00155 Aminotransferase class I and II ATR_RS05660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS05660 PF00672 HAMP domain ATR_RS05660 PF02203 Tar ligand binding domain homologue ATR_RS05665 PF00842 Alanine racemase, C-terminal domain ATR_RS05665 PF01168 Alanine racemase, N-terminal domain ATR_RS05670 PF01541 GIY-YIG catalytic domain ATR_RS05670 PF02151 UvrB/uvrC motif ATR_RS05670 PF08459 UvrC Helix-hairpin-helix N-terminal ATR_RS05675 PF00672 HAMP domain ATR_RS05675 PF02203 Tar ligand binding domain homologue ATR_RS05675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS05690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS05690 PF00672 HAMP domain ATR_RS05690 PF02203 Tar ligand binding domain homologue ATR_RS05695 PF18381 YcaO cyclodehydratase C-terminal domain ATR_RS05695 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ATR_RS05700 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ATR_RS05700 PF14602 Hexapeptide repeat of succinyl-transferase ATR_RS05705 PF18074 Primosomal protein N C-terminal domain ATR_RS05705 PF00270 DEAD/DEAH box helicase ATR_RS05705 PF17764 3′ DNA-binding domain (3′BD) ATR_RS05705 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ATR_RS05705 PF00271 Helicase conserved C-terminal domain ATR_RS05730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ATR_RS05730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ATR_RS05740 PF01522 Polysaccharide deacetylase ATR_RS05770 PF07669 Eco57I restriction-modification methylase ATR_RS05775 PF01709 Transcriptional regulator ATR_RS05795 PF03641 Possible lysine decarboxylase ATR_RS05800 PF13419 Haloacid dehalogenase-like hydrolase ATR_RS05820 PF00171 Aldehyde dehydrogenase family ATR_RS05835 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ATR_RS05835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ATR_RS05855 PF13193 AMP-binding enzyme C-terminal domain ATR_RS05855 PF00501 AMP-binding enzyme ATR_RS05860 PF03062 MBOAT, membrane-bound O-acyltransferase family ATR_RS05870 PF00550 Phosphopantetheine attachment site ATR_RS05875 PF00132 Bacterial transferase hexapeptide (six repeats) ATR_RS05915 PF13476 AAA domain ATR_RS05920 PF12320 Type 5 capsule protein repressor C-terminal domain ATR_RS05920 PF00149 Calcineurin-like phosphoesterase ATR_RS05935 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATR_RS05935 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATR_RS05955 PF08386 TAP-like protein ATR_RS05955 PF00561 alpha/beta hydrolase fold ATR_RS05970 PF00109 Beta-ketoacyl synthase, N-terminal domain ATR_RS05970 PF02801 Beta-ketoacyl synthase, C-terminal domain ATR_RS05980 PF00550 Phosphopantetheine attachment site ATR_RS06000 PF00221 Aromatic amino acid lyase ATR_RS06025 PF00501 AMP-binding enzyme ATR_RS06025 PF13193 AMP-binding enzyme C-terminal domain ATR_RS06030 PF00005 ABC transporter ATR_RS06045 PF00109 Beta-ketoacyl synthase, N-terminal domain ATR_RS06045 PF02801 Beta-ketoacyl synthase, C-terminal domain ATR_RS06070 PF01145 SPFH domain / Band 7 family ATR_RS06075 PF00672 HAMP domain ATR_RS06075 PF13426 PAS domain ATR_RS06075 PF00512 His Kinase A (phospho-acceptor) domain ATR_RS06075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS06080 PF00072 Response regulator receiver domain ATR_RS06080 PF00486 Transcriptional regulatory protein, C terminal ATR_RS06105 PF05525 Branched-chain amino acid transport protein ATR_RS06110 PF00588 SpoU rRNA Methylase family ATR_RS06115 PF01842 ACT domain ATR_RS06115 PF00551 Formyl transferase ATR_RS06120 PF03949 Malic enzyme, NAD binding domain ATR_RS06120 PF01515 Phosphate acetyl/butaryl transferase ATR_RS06120 PF00390 Malic enzyme, N-terminal domain ATR_RS06125 PF02578 Multi-copper polyphenol oxidoreductase laccase ATR_RS06135 PF08501 Shikimate dehydrogenase substrate binding domain ATR_RS06140 PF00925 GTP cyclohydrolase II ATR_RS06140 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ATR_RS06165 PF00293 NUDIX domain ATR_RS06170 PF04461 Protein of unknown function (DUF520) ATR_RS06175 PF04241 Protein of unknown function (DUF423) ATR_RS06180 PF00156 Phosphoribosyl transferase domain ATR_RS06185 PF11791 Aconitate B N-terminal domain ATR_RS06185 PF06434 Aconitate hydratase 2 N-terminus ATR_RS06185 PF00330 Aconitase family (aconitate hydratase) ATR_RS06195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ATR_RS06205 PF00486 Transcriptional regulatory protein, C terminal ATR_RS06205 PF00072 Response regulator receiver domain ATR_RS06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS06215 PF00893 Small Multidrug Resistance protein ATR_RS06225 PF01161 Phosphatidylethanolamine-binding protein ATR_RS06230 PF03466 LysR substrate binding domain ATR_RS06230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATR_RS06235 PF03601 Conserved hypothetical protein 698 ATR_RS06245 PF02770 Acyl-CoA dehydrogenase, middle domain ATR_RS06245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATR_RS06245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATR_RS06270 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS06270 PF17158 Membrane-associated sensor, integral membrane domain ATR_RS06275 PF02665 Nitrate reductase gamma subunit ATR_RS06275 PF02754 Cysteine-rich domain ATR_RS06275 PF13183 4Fe-4S dicluster domain ATR_RS06280 PF01790 Prolipoprotein diacylglyceryl transferase ATR_RS06300 PF02348 Cytidylyltransferase ATR_RS06305 PF00005 ABC transporter ATR_RS06305 PF12399 Branched-chain amino acid ATP-binding cassette transporter ATR_RS06315 PF00591 Glycosyl transferase family, a/b domain ATR_RS06315 PF02885 Glycosyl transferase family, helical bundle domain ATR_RS06325 PF00106 short chain dehydrogenase ATR_RS06335 PF00933 Glycosyl hydrolase family 3 N terminal domain ATR_RS06345 PF00684 DnaJ central domain ATR_RS06345 PF00226 DnaJ domain ATR_RS06345 PF01556 DnaJ C terminal domain ATR_RS06360 PF00873 AcrB/AcrD/AcrF family ATR_RS06365 PF00529 HlyD membrane-fusion protein of T1SS ATR_RS06365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATR_RS06380 PF00072 Response regulator receiver domain ATR_RS06380 PF00486 Transcriptional regulatory protein, C terminal ATR_RS06385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS06385 PF08447 PAS fold ATR_RS06385 PF08448 PAS fold ATR_RS06390 PF08534 Redoxin ATR_RS06395 PF00873 AcrB/AcrD/AcrF family ATR_RS06400 PF00873 AcrB/AcrD/AcrF family ATR_RS06405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATR_RS06415 PF11849 Domain of unknown function (DUF3369) ATR_RS06420 PF00813 FliP family ATR_RS06425 PF00905 Penicillin binding protein transpeptidase domain ATR_RS06425 PF03717 Penicillin-binding Protein dimerisation domain ATR_RS06445 PF00005 ABC transporter ATR_RS06450 PF02390 Putative methyltransferase ATR_RS06460 PF00849 RNA pseudouridylate synthase ATR_RS06460 PF01479 S4 domain ATR_RS06465 PF01098 Cell cycle protein ATR_RS06480 PF00202 Aminotransferase class-III ATR_RS06485 PF06865 Pyrimidine/purine nucleoside phosphorylase ATR_RS06500 PF00563 EAL domain ATR_RS06500 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS06500 PF03707 Bacterial signalling protein N terminal repeat ATR_RS06510 PF00672 HAMP domain ATR_RS06510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS06510 PF02203 Tar ligand binding domain homologue ATR_RS06520 PF00403 Heavy-metal-associated domain ATR_RS06525 PF01022 Bacterial regulatory protein, arsR family ATR_RS06535 PF02203 Tar ligand binding domain homologue ATR_RS06535 PF00672 HAMP domain ATR_RS06535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS06540 PF00075 RNase H ATR_RS06545 PF00682 HMGL-like ATR_RS06555 PF01312 FlhB HrpN YscU SpaS Family ATR_RS06565 PF00583 Acetyltransferase (GNAT) family ATR_RS06570 PF01926 50S ribosome-binding GTPase ATR_RS06590 PF00475 Imidazoleglycerol-phosphate dehydratase ATR_RS06595 PF05036 Sporulation related domain ATR_RS06595 PF03330 Lytic transglycolase ATR_RS06605 PF01026 TatD related DNase ATR_RS06615 PF07724 AAA domain (Cdc48 subfamily) ATR_RS06615 PF10431 C-terminal, D2-small domain, of ClpB protein ATR_RS06620 PF00227 Proteasome subunit ATR_RS06625 PF03948 Ribosomal protein L9, C-terminal domain ATR_RS06625 PF01281 Ribosomal protein L9, N-terminal domain ATR_RS06635 PF02441 Flavoprotein ATR_RS06640 PF01467 Cytidylyltransferase-like ATR_RS06645 PF02223 Thymidylate kinase ATR_RS06650 PF13393 Histidyl-tRNA synthetase ATR_RS06650 PF03129 Anticodon binding domain ATR_RS06655 PF17944 Arginine decarboxylase C-terminal helical extension ATR_RS06655 PF17810 Arginine decarboxylase helical bundle domain ATR_RS06655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATR_RS06660 PF00132 Bacterial transferase hexapeptide (six repeats) ATR_RS06660 PF06426 Serine acetyltransferase, N-terminal ATR_RS06665 PF01925 Sulfite exporter TauE/SafE ATR_RS06680 PF06865 Pyrimidine/purine nucleoside phosphorylase ATR_RS06710 PF08668 HDOD domain ATR_RS06715 PF06071 Protein of unknown function (DUF933) ATR_RS06715 PF01926 50S ribosome-binding GTPase ATR_RS06720 PF02554 Carbon starvation protein CstA ATR_RS06720 PF13722 5TM C-terminal transporter carbon starvation CstA ATR_RS06735 PF00593 TonB dependent receptor ATR_RS06735 PF07715 TonB-dependent Receptor Plug Domain ATR_RS06740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATR_RS06740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATR_RS06745 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATR_RS06750 PF08334 Type II secretion system (T2SS), protein G ATR_RS06750 PF07963 Prokaryotic N-terminal methylation motif ATR_RS06755 PF00772 DnaB-like helicase N terminal domain ATR_RS06755 PF03796 DnaB-like helicase C terminal domain ATR_RS06760 PF04551 GcpE protein ATR_RS06765 PF08448 PAS fold ATR_RS06765 PF08447 PAS fold ATR_RS06765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS06775 PF01336 OB-fold nucleic acid binding domain ATR_RS06775 PF00152 tRNA synthetases class II (D, K and N) ATR_RS06780 PF00464 Serine hydroxymethyltransferase ATR_RS06790 PF04715 Anthranilate synthase component I, N terminal region ATR_RS06790 PF00425 chorismate binding enzyme ATR_RS06795 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ATR_RS06800 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ATR_RS06810 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS06810 PF17158 Membrane-associated sensor, integral membrane domain ATR_RS06820 PF00300 Histidine phosphatase superfamily (branch 1) ATR_RS06830 PF10396 GTP-binding protein TrmE N-terminus ATR_RS06830 PF12631 MnmE helical domain ATR_RS06830 PF01926 50S ribosome-binding GTPase ATR_RS06840 PF14849 YidC periplasmic domain ATR_RS06840 PF02096 60Kd inner membrane protein ATR_RS06845 PF01809 Putative membrane protein insertion efficiency factor ATR_RS06850 PF00825 Ribonuclease P ATR_RS06855 PF00468 Ribosomal protein L34 ATR_RS06860 PF17871 AAA lid domain ATR_RS06860 PF07724 AAA domain (Cdc48 subfamily) ATR_RS06860 PF02861 Clp amino terminal domain, pathogenicity island component ATR_RS06860 PF00004 ATPase family associated with various cellular activities (AAA) ATR_RS06860 PF10431 C-terminal, D2-small domain, of ClpB protein ATR_RS06865 PF01351 Ribonuclease HII ATR_RS06870 PF12704 MacB-like periplasmic core domain ATR_RS06870 PF02687 FtsX-like permease family ATR_RS06870 PF00005 ABC transporter ATR_RS06875 PF00005 ABC transporter ATR_RS06875 PF12704 MacB-like periplasmic core domain ATR_RS06875 PF02687 FtsX-like permease family ATR_RS06890 PF01618 MotA/TolQ/ExbB proton channel family ATR_RS06895 PF02472 Biopolymer transport protein ExbD/TolR ATR_RS06905 PF01420 Type I restriction modification DNA specificity domain ATR_RS06910 PF12161 HsdM N-terminal domain ATR_RS06910 PF02384 N-6 DNA Methylase ATR_RS06915 PF02661 Fic/DOC family ATR_RS06915 PF13784 Fic/DOC family N-terminal ATR_RS06925 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) ATR_RS06925 PF00271 Helicase conserved C-terminal domain ATR_RS06925 PF08463 EcoEI R protein C-terminal ATR_RS06925 PF04851 Type III restriction enzyme, res subunit ATR_RS06930 PF00118 TCP-1/cpn60 chaperonin family ATR_RS06935 PF00166 Chaperonin 10 Kd subunit ATR_RS06940 PF00348 Polyprenyl synthetase ATR_RS06945 PF02575 YbaB/EbfC DNA-binding family ATR_RS06950 PF02261 Aspartate decarboxylase ATR_RS06955 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ATR_RS06960 PF01584 CheW-like domain ATR_RS06965 PF02601 Exonuclease VII, large subunit ATR_RS06965 PF13742 OB-fold nucleic acid binding domain ATR_RS06970 PF01209 ubiE/COQ5 methyltransferase family ATR_RS06985 PF13277 YmdB-like protein ATR_RS06990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS06990 PF00512 His Kinase A (phospho-acceptor) domain ATR_RS06990 PF00989 PAS fold ATR_RS06990 PF13188 PAS domain ATR_RS06990 PF13426 PAS domain ATR_RS07000 PF00072 Response regulator receiver domain ATR_RS07000 PF00486 Transcriptional regulatory protein, C terminal ATR_RS07005 PF02203 Tar ligand binding domain homologue ATR_RS07005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS07005 PF00672 HAMP domain ATR_RS07020 PF00486 Transcriptional regulatory protein, C terminal ATR_RS07020 PF00072 Response regulator receiver domain ATR_RS07030 PF02719 Polysaccharide biosynthesis protein ATR_RS07040 PF00953 Glycosyl transferase family 4 ATR_RS07045 PF01370 NAD dependent epimerase/dehydratase family ATR_RS07050 PF00535 Glycosyl transferase family 2 ATR_RS07055 PF00535 Glycosyl transferase family 2 ATR_RS07065 PF13419 Haloacid dehalogenase-like hydrolase ATR_RS07080 PF16363 GDP-mannose 4,6 dehydratase ATR_RS07085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATR_RS07085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATR_RS07090 PF03328 HpcH/HpaI aldolase/citrate lyase family ATR_RS07105 PF03062 MBOAT, membrane-bound O-acyltransferase family ATR_RS07115 PF00534 Glycosyl transferases group 1 ATR_RS07115 PF13439 Glycosyltransferase Family 4 ATR_RS07125 PF08239 Bacterial SH3 domain ATR_RS07125 PF00005 ABC transporter ATR_RS07130 PF01061 ABC-2 type transporter ATR_RS07135 PF16363 GDP-mannose 4,6 dehydratase ATR_RS07150 PF00072 Response regulator receiver domain ATR_RS07155 PF00072 Response regulator receiver domain ATR_RS07155 PF13188 PAS domain ATR_RS07155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS07155 PF00512 His Kinase A (phospho-acceptor) domain ATR_RS07155 PF08448 PAS fold ATR_RS07160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ATR_RS07165 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ATR_RS07170 PF03480 Bacterial extracellular solute-binding protein, family 7 ATR_RS07175 PF02673 Bacitracin resistance protein BacA ATR_RS07180 PF02621 Menaquinone biosynthesis ATR_RS07190 PF02391 MoaE protein ATR_RS07200 PF00120 Glutamine synthetase, catalytic domain ATR_RS07200 PF03951 Glutamine synthetase, beta-Grasp domain ATR_RS07205 PF00885 6,7-dimethyl-8-ribityllumazine synthase ATR_RS07210 PF01029 NusB family ATR_RS07215 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ATR_RS07230 PF00589 Phage integrase family ATR_RS07230 PF14659 Phage integrase, N-terminal SAM-like domain ATR_RS07230 PF13356 Arm DNA-binding domain ATR_RS07265 PF00403 Heavy-metal-associated domain ATR_RS07270 PF06421 GTP-binding protein LepA C-terminus ATR_RS07270 PF00009 Elongation factor Tu GTP binding domain ATR_RS07270 PF00679 Elongation factor G C-terminus ATR_RS07270 PF03144 Elongation factor Tu domain 2 ATR_RS07290 PF00117 Glutamine amidotransferase class-I ATR_RS07295 PF00977 Histidine biosynthesis protein ATR_RS07300 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS07300 PF00072 Response regulator receiver domain ATR_RS07305 PF00625 Guanylate kinase ATR_RS07315 PF00005 ABC transporter ATR_RS07320 PF00889 Elongation factor TS ATR_RS07325 PF00318 Ribosomal protein S2 ATR_RS07330 PF02875 Mur ligase family, glutamate ligase domain ATR_RS07330 PF08245 Mur ligase middle domain ATR_RS07345 PF00133 tRNA synthetases class I (I, L, M and V) ATR_RS07345 PF08264 Anticodon-binding domain of tRNA ATR_RS07350 PF06039 Malate:quinone oxidoreductase (Mqo) ATR_RS07355 PF02464 Competence-damaged protein ATR_RS07355 PF00994 Probable molybdopterin binding domain ATR_RS07355 PF18146 Damage-inducible protein CinA KH domain ATR_RS07400 PF00512 His Kinase A (phospho-acceptor) domain ATR_RS07400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS07405 PF00486 Transcriptional regulatory protein, C terminal ATR_RS07405 PF00072 Response regulator receiver domain ATR_RS07415 PF00474 Sodium:solute symporter family ATR_RS07425 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATR_RS07425 PF00929 Exonuclease ATR_RS07425 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATR_RS07425 PF11490 DNA polymerase III polC-type N-terminus II ATR_RS07425 PF02811 PHP domain ATR_RS07425 PF14579 Helix-hairpin-helix motif ATR_RS07435 PF00474 Sodium:solute symporter family ATR_RS07445 PF00474 Sodium:solute symporter family ATR_RS07455 PF00871 Acetokinase family ATR_RS07460 PF01515 Phosphate acetyl/butaryl transferase ATR_RS07465 PF00871 Acetokinase family ATR_RS07470 PF01343 Peptidase family S49 ATR_RS07475 PF01979 Amidohydrolase family ATR_RS07480 PF01220 Dehydroquinase class II ATR_RS07485 PF01321 Creatinase/Prolidase N-terminal domain ATR_RS07485 PF00557 Metallopeptidase family M24 ATR_RS07490 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ATR_RS07505 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ATR_RS07505 PF14572 Phosphoribosyl synthetase-associated domain ATR_RS07510 PF05736 OprF membrane domain ATR_RS07510 PF00691 OmpA family ATR_RS07515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATR_RS07515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATR_RS07515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATR_RS07515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATR_RS07520 PF00483 Nucleotidyl transferase ATR_RS07525 PF00342 Phosphoglucose isomerase ATR_RS07545 PF00113 Enolase, C-terminal TIM barrel domain ATR_RS07545 PF03952 Enolase, N-terminal domain ATR_RS07555 PF05188 MutS domain II ATR_RS07555 PF05192 MutS domain III ATR_RS07555 PF01624 MutS domain I ATR_RS07555 PF00488 MutS domain V ATR_RS07555 PF05190 MutS family domain IV ATR_RS07570 PF00682 HMGL-like ATR_RS07570 PF08502 LeuA allosteric (dimerisation) domain ATR_RS07575 PF01434 Peptidase family M41 ATR_RS07575 PF17862 AAA+ lid domain ATR_RS07575 PF00004 ATPase family associated with various cellular activities (AAA) ATR_RS07585 PF01207 Dihydrouridine synthase (Dus) ATR_RS07595 PF02590 Predicted SPOUT methyltransferase ATR_RS07600 PF02581 Thiamine monophosphate synthase ATR_RS07605 PF17848 Acetyl-coA carboxylase zinc finger domain ATR_RS07605 PF01039 Carboxyl transferase domain ATR_RS07610 PF02772 S-adenosylmethionine synthetase, central domain ATR_RS07610 PF00438 S-adenosylmethionine synthetase, N-terminal domain ATR_RS07610 PF02773 S-adenosylmethionine synthetase, C-terminal domain ATR_RS07615 PF01380 SIS domain ATR_RS07620 PF00459 Inositol monophosphatase family ATR_RS07655 PF00883 Cytosol aminopeptidase family, catalytic domain ATR_RS07655 PF02789 Cytosol aminopeptidase family, N-terminal domain ATR_RS07665 PF00291 Pyridoxal-phosphate dependent enzyme ATR_RS07670 PF00156 Phosphoribosyl transferase domain ATR_RS07675 PF01053 Cys/Met metabolism PLP-dependent enzyme ATR_RS07680 PF01053 Cys/Met metabolism PLP-dependent enzyme ATR_RS07685 PF02502 Ribose/Galactose Isomerase ATR_RS07690 PF10502 Signal peptidase, peptidase S26 ATR_RS07695 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ATR_RS07695 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ATR_RS07700 PF00313 'Cold-shock' DNA-binding domain ATR_RS07715 PF04998 RNA polymerase Rpb1, domain 5 ATR_RS07715 PF05000 RNA polymerase Rpb1, domain 4 ATR_RS07715 PF04983 RNA polymerase Rpb1, domain 3 ATR_RS07715 PF00623 RNA polymerase Rpb1, domain 2 ATR_RS07715 PF04997 RNA polymerase Rpb1, domain 1 ATR_RS07720 PF04563 RNA polymerase beta subunit ATR_RS07720 PF10385 RNA polymerase beta subunit external 1 domain ATR_RS07720 PF04565 RNA polymerase Rpb2, domain 3 ATR_RS07720 PF00562 RNA polymerase Rpb2, domain 6 ATR_RS07720 PF04560 RNA polymerase Rpb2, domain 7 ATR_RS07720 PF04561 RNA polymerase Rpb2, domain 2 ATR_RS07725 PF00542 Ribosomal protein L7/L12 C-terminal domain ATR_RS07725 PF16320 Ribosomal protein L7/L12 dimerisation domain ATR_RS07730 PF00466 Ribosomal protein L10 ATR_RS07735 PF00687 Ribosomal protein L1p/L10e family ATR_RS07740 PF00298 Ribosomal protein L11, RNA binding domain ATR_RS07740 PF03946 Ribosomal protein L11, N-terminal domain ATR_RS07745 PF02357 Transcription termination factor nusG ATR_RS07760 PF00471 Ribosomal protein L33 ATR_RS07765 PF00009 Elongation factor Tu GTP binding domain ATR_RS07765 PF03144 Elongation factor Tu domain 2 ATR_RS07765 PF03143 Elongation factor Tu C-terminal domain ATR_RS07790 PF08245 Mur ligase middle domain ATR_RS07795 PF00953 Glycosyl transferase family 4 ATR_RS07795 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ATR_RS07800 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ATR_RS07800 PF01676 Metalloenzyme superfamily ATR_RS07805 PF00005 ABC transporter ATR_RS07805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATR_RS07810 PF00912 Transglycosylase ATR_RS07810 PF00905 Penicillin binding protein transpeptidase domain ATR_RS07815 PF04357 TamB, inner membrane protein subunit of TAM complex ATR_RS07830 PF00271 Helicase conserved C-terminal domain ATR_RS07830 PF02559 CarD-like/TRCF domain ATR_RS07830 PF03461 TRCF domain ATR_RS07830 PF17757 UvrB interaction domain ATR_RS07830 PF00270 DEAD/DEAH box helicase ATR_RS07855 PF08245 Mur ligase middle domain ATR_RS07865 PF13603 Leucyl-tRNA synthetase, Domain 2 ATR_RS07865 PF09334 tRNA synthetases class I (M) ATR_RS07865 PF00133 tRNA synthetases class I (I, L, M and V) ATR_RS07875 PF01618 MotA/TolQ/ExbB proton channel family ATR_RS07880 PF00691 OmpA family ATR_RS07880 PF13677 Membrane MotB of proton-channel complex MotA/MotB ATR_RS07890 PF02355 Protein export membrane protein ATR_RS07890 PF07549 SecD/SecF GG Motif ATR_RS07895 PF02355 Protein export membrane protein ATR_RS07900 PF02699 Preprotein translocase subunit ATR_RS07910 PF02272 DHHA1 domain ATR_RS07910 PF00571 CBS domain ATR_RS07910 PF01368 DHH family ATR_RS07910 PF01743 Poly A polymerase head domain ATR_RS07915 PF00924 Mechanosensitive ion channel ATR_RS07915 PF05552 Conserved TM helix ATR_RS07920 PF04073 Aminoacyl-tRNA editing domain ATR_RS07920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATR_RS07920 PF03129 Anticodon binding domain ATR_RS07925 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ATR_RS07925 PF01488 Shikimate / quinate 5-dehydrogenase ATR_RS07925 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ATR_RS07930 PF00348 Polyprenyl synthetase ATR_RS07940 PF00815 Histidinol dehydrogenase ATR_RS07945 PF01202 Shikimate kinase ATR_RS07950 PF05538 Campylobacter major outer membrane protein ATR_RS07955 PF03309 Type III pantothenate kinase ATR_RS07960 PF01634 ATP phosphoribosyltransferase ATR_RS07985 PF02203 Tar ligand binding domain homologue ATR_RS07985 PF00672 HAMP domain ATR_RS07985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS07990 PF00579 tRNA synthetases class I (W and Y) ATR_RS07995 PF02659 Putative manganese efflux pump ATR_RS08000 PF00171 Aldehyde dehydrogenase family ATR_RS08005 PF02472 Biopolymer transport protein ExbD/TolR ATR_RS08010 PF01618 MotA/TolQ/ExbB proton channel family ATR_RS08025 PF01042 Endoribonuclease L-PSP ATR_RS08030 PF00293 NUDIX domain ATR_RS08040 PF00155 Aminotransferase class I and II ATR_RS08045 PF09335 SNARE associated Golgi protein ATR_RS08050 PF01245 Ribosomal protein L19 ATR_RS08055 PF01746 tRNA (Guanine-1)-methyltransferase ATR_RS08065 PF01717 Cobalamin-independent synthase, Catalytic domain ATR_RS08065 PF08267 Cobalamin-independent synthase, N-terminal domain ATR_RS08070 PF02203 Tar ligand binding domain homologue ATR_RS08070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS08070 PF00672 HAMP domain ATR_RS08075 PF03994 Domain of Unknown Function (DUF350) ATR_RS08080 PF01613 Flavin reductase like domain ATR_RS08090 PF00771 FHIPEP family ATR_RS08100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATR_RS08100 PF18269 T3SS EscN ATPase C-terminal domain ATR_RS08110 PF01312 FlhB HrpN YscU SpaS Family ATR_RS08125 PF00460 Flagella basal body rod protein ATR_RS08125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATR_RS08130 PF02049 Flagellar hook-basal body complex protein FliE ATR_RS08140 PF10609 NUBPL iron-transfer P-loop NTPase ATR_RS08145 PF00448 SRP54-type protein, GTPase domain ATR_RS08165 PF16973 Flagellar motor switch protein FliN N-terminal ATR_RS08165 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ATR_RS08195 PF07196 Flagellin hook IN motif ATR_RS08195 PF00460 Flagella basal body rod protein ATR_RS08195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATR_RS08195 PF07559 Flagellar basal body protein FlaE ATR_RS08205 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ATR_RS08215 PF14842 FliG N-terminal domain ATR_RS08215 PF14841 FliG middle domain ATR_RS08215 PF01706 FliG C-terminal domain ATR_RS08220 PF08345 Flagellar M-ring protein C-terminal ATR_RS08220 PF01514 Secretory protein of YscJ/FliF family ATR_RS08225 PF00460 Flagella basal body rod protein ATR_RS08230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATR_RS08230 PF00460 Flagella basal body rod protein ATR_RS08240 PF00072 Response regulator receiver domain ATR_RS08245 PF00460 Flagella basal body rod protein ATR_RS08245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATR_RS08260 PF01782 RimM N-terminal domain ATR_RS08270 PF00886 Ribosomal protein S16 ATR_RS08275 PF02978 Signal peptide binding domain ATR_RS08275 PF02881 SRP54-type protein, helical bundle domain ATR_RS08275 PF00448 SRP54-type protein, GTPase domain ATR_RS08280 PF00849 RNA pseudouridylate synthase ATR_RS08285 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ATR_RS08285 PF02390 Putative methyltransferase ATR_RS08295 PF01784 NIF3 (NGG1p interacting factor 3) ATR_RS08300 PF02091 Glycyl-tRNA synthetase alpha subunit ATR_RS08310 PF00731 AIR carboxylase ATR_RS08320 PF01136 Peptidase family U32 ATR_RS08325 PF17200 Single Cache domain 2 ATR_RS08325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS08325 PF00672 HAMP domain ATR_RS08330 PF13476 AAA domain ATR_RS08335 PF01513 ATP-NAD kinase ATR_RS08340 PF03144 Elongation factor Tu domain 2 ATR_RS08340 PF00009 Elongation factor Tu GTP binding domain ATR_RS08340 PF03764 Elongation factor G, domain IV ATR_RS08340 PF14492 Elongation Factor G, domain II ATR_RS08340 PF00679 Elongation factor G C-terminus ATR_RS08345 PF00177 Ribosomal protein S7p/S5e ATR_RS08350 PF00164 Ribosomal protein S12/S23 ATR_RS08355 PF07715 TonB-dependent Receptor Plug Domain ATR_RS08355 PF00593 TonB dependent receptor ATR_RS08390 PF07724 AAA domain (Cdc48 subfamily) ATR_RS08390 PF10431 C-terminal, D2-small domain, of ClpB protein ATR_RS08390 PF00004 ATPase family associated with various cellular activities (AAA) ATR_RS08390 PF02861 Clp amino terminal domain, pathogenicity island component ATR_RS08390 PF17871 AAA lid domain ATR_RS08395 PF02617 ATP-dependent Clp protease adaptor protein ClpS ATR_RS08420 PF00501 AMP-binding enzyme ATR_RS08420 PF13193 AMP-binding enzyme C-terminal domain ATR_RS08425 PF01575 MaoC like domain ATR_RS08465 PF00312 Ribosomal protein S15 ATR_RS08470 PF04055 Radical SAM superfamily ATR_RS08470 PF06463 Molybdenum Cofactor Synthesis C ATR_RS08475 PF00591 Glycosyl transferase family, a/b domain ATR_RS08475 PF02885 Glycosyl transferase family, helical bundle domain ATR_RS08490 PF00384 Molybdopterin oxidoreductase ATR_RS08490 PF01568 Molydopterin dinucleotide binding domain ATR_RS08490 PF10518 TAT (twin-arginine translocation) pathway signal sequence ATR_RS08490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ATR_RS08495 PF12838 4Fe-4S dicluster domain ATR_RS08495 PF12800 4Fe-4S binding domain ATR_RS08500 PF12801 4Fe-4S binding domain ATR_RS08500 PF00037 4Fe-4S binding domain ATR_RS08505 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ATR_RS08525 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS08525 PF08495 FIST N domain ATR_RS08525 PF10442 FIST C domain ATR_RS08525 PF00563 EAL domain ATR_RS08535 PF02403 Seryl-tRNA synthetase N-terminal domain ATR_RS08535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATR_RS08540 PF08521 Two-component sensor kinase N-terminal ATR_RS08540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATR_RS08540 PF00512 His Kinase A (phospho-acceptor) domain ATR_RS08545 PF00072 Response regulator receiver domain ATR_RS08545 PF00486 Transcriptional regulatory protein, C terminal ATR_RS08550 PF00639 PPIC-type PPIASE domain ATR_RS08555 PF01116 Fructose-bisphosphate aldolase class-II ATR_RS08560 PF13291 ACT domain ATR_RS08560 PF00291 Pyridoxal-phosphate dependent enzyme ATR_RS08565 PF00119 ATP synthase A chain ATR_RS08570 PF02581 Thiamine monophosphate synthase ATR_RS08575 PF13361 UvrD-like helicase C-terminal domain ATR_RS08575 PF00580 UvrD/REP helicase N-terminal domain ATR_RS08580 PF00696 Amino acid kinase family ATR_RS08585 PF00291 Pyridoxal-phosphate dependent enzyme ATR_RS08595 PF00033 Cytochrome b/b6/petB ATR_RS08595 PF00032 Cytochrome b(C-terminal)/b6/petD ATR_RS08615 PF06508 Queuosine biosynthesis protein QueC ATR_RS08635 PF00550 Phosphopantetheine attachment site ATR_RS08640 PF02801 Beta-ketoacyl synthase, C-terminal domain ATR_RS08640 PF00109 Beta-ketoacyl synthase, N-terminal domain ATR_RS08645 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ATR_RS08650 PF01230 HIT domain ATR_RS08655 PF01409 tRNA synthetases class II core domain (F) ATR_RS08655 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ATR_RS08660 PF03147 Ferredoxin-fold anticodon binding domain ATR_RS08660 PF03484 tRNA synthetase B5 domain ATR_RS08660 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ATR_RS08660 PF01588 Putative tRNA binding domain ATR_RS08665 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATR_RS08670 PF02401 LytB protein ATR_RS08675 PF00575 S1 RNA binding domain ATR_RS08680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATR_RS08680 PF01842 ACT domain ATR_RS08680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATR_RS08685 PF08207 Elongation factor P (EF-P) KOW-like domain ATR_RS08685 PF09285 Elongation factor P, C-terminal ATR_RS08685 PF01132 Elongation factor P (EF-P) OB domain ATR_RS08690 PF01872 RibD C-terminal domain ATR_RS08690 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATR_RS08695 PF02576 RimP N-terminal domain ATR_RS08700 PF02033 Ribosome-binding factor A ATR_RS08705 PF00009 Elongation factor Tu GTP binding domain ATR_RS08705 PF11987 Translation-initiation factor 2 ATR_RS08705 PF04760 Translation initiation factor IF-2, N-terminal region ATR_RS08715 PF00288 GHMP kinases N terminal domain ATR_RS08715 PF08544 GHMP kinases C terminal ATR_RS08725 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ATR_RS08735 PF01368 DHH family ATR_RS08735 PF02272 DHHA1 domain ATR_RS08740 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ATR_RS08740 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ATR_RS08745 PF02445 Quinolinate synthetase A protein ATR_RS08750 PF02660 Glycerol-3-phosphate acyltransferase ATR_RS08765 PF00472 RF-1 domain ATR_RS08765 PF03462 PCRF domain ATR_RS08770 PF01084 Ribosomal protein S18 ATR_RS08775 PF00436 Single-strand binding protein family ATR_RS08780 PF01250 Ribosomal protein S6 ATR_RS08795 PF00773 RNB domain ATR_RS08800 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ATR_RS08800 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ATR_RS08815 PF08359 YsiA-like protein, C-terminal region ATR_RS08815 PF00440 Bacterial regulatory proteins, tetR family ATR_RS08830 PF08245 Mur ligase middle domain ATR_RS08830 PF01225 Mur ligase family, catalytic domain ATR_RS08830 PF02875 Mur ligase family, glutamate ligase domain ATR_RS08845 PF01702 Queuine tRNA-ribosyltransferase ATR_RS08850 PF02686 Glu-tRNAGln amidotransferase C subunit ATR_RS08855 PF03960 ArsC family ATR_RS08860 PF09190 DALR domain ATR_RS08860 PF01406 tRNA synthetases class I (C) catalytic domain ATR_RS08865 PF13184 NusA-like KH domain ATR_RS08865 PF08529 NusA N-terminal domain ATR_RS08875 PF04055 Radical SAM superfamily ATR_RS08875 PF00919 Uncharacterized protein family UPF0004 ATR_RS08875 PF01938 TRAM domain ATR_RS08880 PF04028 Domain of unknown function (DUF374) ATR_RS08900 PF00012 Hsp70 protein ATR_RS08905 PF01025 GrpE ATR_RS08910 PF01628 HrcA protein C terminal domain ATR_RS08920 PF01416 tRNA pseudouridine synthase ATR_RS08935 PF01255 Putative undecaprenyl diphosphate synthase ATR_RS08940 PF02441 Flavoprotein ATR_RS08940 PF04127 DNA / pantothenate metabolism flavoprotein ATR_RS08945 PF12804 MobA-like NTP transferase domain ATR_RS08945 PF14602 Hexapeptide repeat of succinyl-transferase ATR_RS08955 PF17191 RecG wedge domain ATR_RS08955 PF00270 DEAD/DEAH box helicase ATR_RS08955 PF00271 Helicase conserved C-terminal domain ATR_RS08960 PF05958 tRNA (Uracil-5-)-methyltransferase ATR_RS08965 PF07196 Flagellin hook IN motif ATR_RS08965 PF00669 Bacterial flagellin N-terminal helical region ATR_RS08965 PF00700 Bacterial flagellin C-terminal helical region ATR_RS08970 PF00700 Bacterial flagellin C-terminal helical region ATR_RS08970 PF07196 Flagellin hook IN motif ATR_RS08970 PF00669 Bacterial flagellin N-terminal helical region ATR_RS08980 PF13472 GDSL-like Lipase/Acylhydrolase family ATR_RS08980 PF02348 Cytidylyltransferase ATR_RS08985 PF00483 Nucleotidyl transferase ATR_RS08990 PF02350 UDP-N-acetylglucosamine 2-epimerase ATR_RS08995 PF08666 SAF domain ATR_RS08995 PF03102 NeuB family ATR_RS09005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATR_RS09010 PF02719 Polysaccharide biosynthesis protein ATR_RS09015 PF01227 GTP cyclohydrolase I ATR_RS09020 PF01544 CorA-like Mg2+ transporter protein ATR_RS09025 PF00482 Type II secretion system (T2SS), protein F ATR_RS09030 PF00437 Type II/IV secretion system protein ATR_RS09045 PF01926 50S ribosome-binding GTPase ATR_RS09045 PF07650 KH domain ATR_RS09085 PF00117 Glutamine amidotransferase class-I ATR_RS09125 PF01040 UbiA prenyltransferase family ATR_RS09230 PF13416 Bacterial extracellular solute-binding protein ATR_RS09235 PF00528 Binding-protein-dependent transport system inner membrane component ATR_RS09240 PF00005 ABC transporter ATR_RS09240 PF08402 TOBE domain ATR_RS09250 PF00154 recA bacterial DNA recombination protein ATR_RS09255 PF06968 Biotin and Thiamin Synthesis associated domain ATR_RS09255 PF04055 Radical SAM superfamily ATR_RS09260 PF01131 DNA topoisomerase ATR_RS09260 PF13368 Topoisomerase C-terminal repeat ATR_RS09260 PF01751 Toprim domain ATR_RS09265 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ATR_RS09270 PF02621 Menaquinone biosynthesis ATR_RS09280 PF17758 Proteasomal ATPase OB N-terminal domain ATR_RS09280 PF16450 Proteasomal ATPase OB C-terminal domain ATR_RS09280 PF00004 ATPase family associated with various cellular activities (AAA) ATR_RS09295 PF01740 STAS domain ATR_RS09295 PF00916 Sulfate permease family ATR_RS09300 PF00106 short chain dehydrogenase ATR_RS09305 PF07690 Major Facilitator Superfamily ATR_RS09320 PF13651 Adenine-specific methyltransferase EcoRI ATR_RS09325 PF02899 Phage integrase, N-terminal SAM-like domain ATR_RS09325 PF00589 Phage integrase family ATR_RS09330 PF02384 N-6 DNA Methylase ATR_RS09335 PF01420 Type I restriction modification DNA specificity domain ATR_RS09345 PF13932 GidA associated domain ATR_RS09345 PF01134 Glucose inhibited division protein A ATR_RS09350 PF00677 Lumazine binding domain ATR_RS09365 PF06689 ClpX C4-type zinc finger ATR_RS09365 PF10431 C-terminal, D2-small domain, of ClpB protein ATR_RS09365 PF07724 AAA domain (Cdc48 subfamily) ATR_RS09370 PF00132 Bacterial transferase hexapeptide (six repeats) ATR_RS09370 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ATR_RS09375 PF07977 FabA-like domain ATR_RS09380 PF02684 Lipid-A-disaccharide synthetase ATR_RS09385 PF02677 Epoxyqueuosine reductase QueH ATR_RS09395 PF00209 Sodium:neurotransmitter symporter family ATR_RS09400 PF01261 Xylose isomerase-like TIM barrel ATR_RS09430 PF01027 Inhibitor of apoptosis-promoting Bax1 ATR_RS09435 PF17792 ThiD2 family ATR_RS09435 PF02581 Thiamine monophosphate synthase ATR_RS09445 PF03840 Preprotein translocase SecG subunit ATR_RS09450 PF01765 Ribosome recycling factor ATR_RS09455 PF00156 Phosphoribosyl transferase domain ATR_RS09470 PF00990 Diguanylate cyclase, GGDEF domain ATR_RS09470 PF08448 PAS fold ATR_RS09475 PF01544 CorA-like Mg2+ transporter protein ATR_RS09480 PF00005 ABC transporter ATR_RS09505 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ATR_RS09510 PF00586 AIR synthase related protein, N-terminal domain ATR_RS09510 PF02769 AIR synthase related protein, C-terminal domain ATR_RS09515 PF01924 Hydrogenase formation hypA family ATR_RS09520 PF01455 HupF/HypC family ATR_RS09525 PF02492 CobW/HypB/UreG, nucleotide-binding domain ATR_RS09540 PF00708 Acylphosphatase ATR_RS09540 PF17788 HypF Kae1-like domain ATR_RS09540 PF01300 Telomere recombination ATR_RS09540 PF07503 HypF finger ATR_RS09550 PF01750 Hydrogenase maturation protease ATR_RS09555 PF01292 Prokaryotic cytochrome b561 ATR_RS09560 PF00374 Nickel-dependent hydrogenase ATR_RS09565 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ATR_RS09565 PF10518 TAT (twin-arginine translocation) pathway signal sequence ATR_RS09565 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ATR_RS09570 PF03883 Peroxide stress protein YaaA ATR_RS09575 PF01914 MarC family integral membrane protein ATR_RS09590 PF03167 Uracil DNA glycosylase superfamily ATR_RS09595 PF00171 Aldehyde dehydrogenase family ATR_RS09600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATR_RS09600 PF00205 Thiamine pyrophosphate enzyme, central domain ATR_RS09600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATR_RS09605 PF13419 Haloacid dehalogenase-like hydrolase ATR_RS09610 PF00384 Molybdopterin oxidoreductase ATR_RS09610 PF01568 Molydopterin dinucleotide binding domain ATR_RS09610 PF18364 Molybdopterin oxidoreductase N-terminal domain ATR_RS09620 PF00210 Ferritin-like domain ATR_RS09625 PF07690 Major Facilitator Superfamily ATR_RS09635 PF00009 Elongation factor Tu GTP binding domain ATR_RS09640 PF01507 Phosphoadenosine phosphosulfate reductase family ATR_RS09645 PF01507 Phosphoadenosine phosphosulfate reductase family ATR_RS09655 PF00291 Pyridoxal-phosphate dependent enzyme ATR_RS09660 PF02082 Transcriptional regulator ATR_RS09665 PF01053 Cys/Met metabolism PLP-dependent enzyme ATR_RS09675 PF01212 Beta-eliminating lyase ATR_RS09685 PF00529 HlyD membrane-fusion protein of T1SS ATR_RS09685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATR_RS09690 PF00873 AcrB/AcrD/AcrF family ATR_RS09695 PF02321 Outer membrane efflux protein ATR_RS09700 PF00672 HAMP domain ATR_RS09700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS09700 PF02203 Tar ligand binding domain homologue ATR_RS09705 PF02203 Tar ligand binding domain homologue ATR_RS09705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS09705 PF00672 HAMP domain ATR_RS09720 PF00149 Calcineurin-like phosphoesterase ATR_RS09730 PF12857 TOBE-like domain ATR_RS09730 PF17850 CysA C-terminal regulatory domain ATR_RS09730 PF00005 ABC transporter ATR_RS09735 PF00528 Binding-protein-dependent transport system inner membrane component ATR_RS09740 PF00528 Binding-protein-dependent transport system inner membrane component ATR_RS09745 PF02203 Tar ligand binding domain homologue ATR_RS09745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATR_RS09745 PF00672 HAMP domain ATR_RS09750 PF00581 Rhodanese-like domain ATR_RS09750 PF00899 ThiF family ATR_RS09765 PF02082 Transcriptional regulator ATR_RS09770 PF00679 Elongation factor G C-terminus ATR_RS09770 PF00009 Elongation factor Tu GTP binding domain ATR_RS09770 PF03144 Elongation factor Tu domain 2 ATR_RS09775 PF04143 Sulphur transport ATR_RS09780 PF01206 Sulfurtransferase TusA ATR_RS09785 PF02511 Thymidylate synthase complementing protein ATR_RS09790 PF03458 UPF0126 domain ATR_RS09800 PF00551 Formyl transferase ATR_RS09800 PF02911 Formyl transferase, C-terminal domain ATR_RS09805 PF02075 Crossover junction endodeoxyribonuclease RuvC