locus-tag class description NKI27_RS00005 PF02096 60Kd inner membrane protein NKI27_RS00005 PF14849 YidC periplasmic domain NKI27_RS00010 PF01926 50S ribosome-binding GTPase NKI27_RS00010 PF12631 MnmE helical domain NKI27_RS00010 PF10396 GTP-binding protein TrmE N-terminus NKI27_RS00015 PF01613 Flavin reductase like domain NKI27_RS00015 PF00258 Flavodoxin NKI27_RS00020 PF07690 Major Facilitator Superfamily NKI27_RS00025 PF01134 Glucose inhibited division protein A NKI27_RS00025 PF13932 GidA associated domain NKI27_RS00030 PF02527 rRNA small subunit methyltransferase G NKI27_RS00035 PF13614 AAA domain NKI27_RS00040 PF17762 HTH domain found in ParB protein NKI27_RS00040 PF02195 ParB-like nuclease domain NKI27_RS00045 PF03899 ATP synthase I chain NKI27_RS00050 PF00119 ATP synthase A chain NKI27_RS00055 PF00137 ATP synthase subunit C NKI27_RS00060 PF00430 ATP synthase B/B' CF(0) NKI27_RS00065 PF00213 ATP synthase delta (OSCP) subunit NKI27_RS00070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NKI27_RS00070 PF00306 ATP synthase alpha/beta chain, C terminal domain NKI27_RS00070 PF02874 ATP synthase alpha/beta family, beta-barrel domain NKI27_RS00075 PF00231 ATP synthase NKI27_RS00080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NKI27_RS00080 PF02874 ATP synthase alpha/beta family, beta-barrel domain NKI27_RS00085 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NKI27_RS00085 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NKI27_RS00090 PF00132 Bacterial transferase hexapeptide (six repeats) NKI27_RS00090 PF12804 MobA-like NTP transferase domain NKI27_RS00095 PF01380 SIS domain NKI27_RS00115 PF01740 STAS domain NKI27_RS00115 PF00916 Sulfate permease family NKI27_RS00135 PF00497 Bacterial extracellular solute-binding proteins, family 3 NKI27_RS00135 PF01464 Transglycosylase SLT domain NKI27_RS00145 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NKI27_RS00145 PF07685 CobB/CobQ-like glutamine amidotransferase domain NKI27_RS00185 PF01694 Rhomboid family NKI27_RS00195 PF01979 Amidohydrolase family NKI27_RS00210 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS00210 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS00210 PF00563 EAL domain NKI27_RS00220 PF00487 Fatty acid desaturase NKI27_RS00225 PF00301 Rubredoxin NKI27_RS00230 PF00301 Rubredoxin NKI27_RS00235 PF07992 Pyridine nucleotide-disulphide oxidoreductase NKI27_RS00235 PF18113 Rubredoxin binding C-terminal domain NKI27_RS00240 PF00196 Bacterial regulatory proteins, luxR family NKI27_RS00260 PF08534 Redoxin NKI27_RS00260 PF00462 Glutaredoxin NKI27_RS00265 PF10415 Fumarase C C-terminus NKI27_RS00265 PF00206 Lyase NKI27_RS00285 PF02028 BCCT, betaine/carnitine/choline family transporter NKI27_RS00290 PF02525 Flavodoxin-like fold NKI27_RS00295 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NKI27_RS00305 PF02661 Fic/DOC family NKI27_RS00315 PF04116 Fatty acid hydroxylase superfamily NKI27_RS00320 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NKI27_RS00320 PF12833 Helix-turn-helix domain NKI27_RS00330 PF01618 MotA/TolQ/ExbB proton channel family NKI27_RS00335 PF01618 MotA/TolQ/ExbB proton channel family NKI27_RS00340 PF02472 Biopolymer transport protein ExbD/TolR NKI27_RS00345 PF03544 Gram-negative bacterial TonB protein C-terminal NKI27_RS00355 PF05016 ParE toxin of type II toxin-antitoxin system, parDE NKI27_RS00360 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH NKI27_RS00365 PF00005 ABC transporter NKI27_RS00365 PF16326 ABC transporter C-terminal domain NKI27_RS00365 PF12848 ABC transporter NKI27_RS00375 PF01914 MarC family integral membrane protein NKI27_RS00380 PF01627 Hpt domain NKI27_RS00380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS00380 PF00072 Response regulator receiver domain NKI27_RS00380 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS00380 PF00672 HAMP domain NKI27_RS00380 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NKI27_RS00385 PF00005 ABC transporter NKI27_RS00395 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS00400 PF07702 UTRA domain NKI27_RS00400 PF00392 Bacterial regulatory proteins, gntR family NKI27_RS00405 PF06754 Phosphonate metabolism protein PhnG NKI27_RS00410 PF05845 Bacterial phosphonate metabolism protein (PhnH) NKI27_RS00415 PF05861 Bacterial phosphonate metabolism protein (PhnI) NKI27_RS00420 PF06007 Phosphonate metabolism protein PhnJ NKI27_RS00425 PF00005 ABC transporter NKI27_RS00430 PF00005 ABC transporter NKI27_RS00435 PF07969 Amidohydrolase family NKI27_RS00445 PF12706 Beta-lactamase superfamily domain NKI27_RS00455 PF04893 Yip1 domain NKI27_RS00475 PF08267 Cobalamin-independent synthase, N-terminal domain NKI27_RS00475 PF01717 Cobalamin-independent synthase, Catalytic domain NKI27_RS00480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS00480 PF03466 LysR substrate binding domain NKI27_RS00485 PF03477 ATP cone domain NKI27_RS00485 PF02867 Ribonucleotide reductase, barrel domain NKI27_RS00485 PF00317 Ribonucleotide reductase, all-alpha domain NKI27_RS00490 PF00268 Ribonucleotide reductase, small chain NKI27_RS00500 PF00005 ABC transporter NKI27_RS00500 PF00664 ABC transporter transmembrane region NKI27_RS00510 PF08448 PAS fold NKI27_RS00510 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS00530 PF00510 Cytochrome c oxidase subunit III NKI27_RS00535 PF01022 Bacterial regulatory protein, arsR family NKI27_RS00540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NKI27_RS00540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NKI27_RS00565 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS00570 PF00005 ABC transporter NKI27_RS00575 PF03600 Citrate transporter NKI27_RS00585 PF03600 Citrate transporter NKI27_RS00610 PF12729 Four helix bundle sensory module for signal transduction NKI27_RS00610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NKI27_RS00610 PF00672 HAMP domain NKI27_RS00625 PF03334 Na+/H+ antiporter subunit NKI27_RS00630 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NKI27_RS00635 PF01899 Na+/H+ ion antiporter subunit NKI27_RS00640 PF00361 Proton-conducting membrane transporter NKI27_RS00645 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NKI27_RS00650 PF13244 Domain of unknown function (DUF4040) NKI27_RS00650 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NKI27_RS00650 PF00361 Proton-conducting membrane transporter NKI27_RS00650 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NKI27_RS00665 PF00196 Bacterial regulatory proteins, luxR family NKI27_RS00665 PF17874 MalT-like TPR region NKI27_RS00665 PF17874 MalT-like TPR region NKI27_RS00665 PF00196 Bacterial regulatory proteins, luxR family NKI27_RS00675 PF00884 Sulfatase NKI27_RS00685 PF01814 Hemerythrin HHE cation binding domain NKI27_RS00690 PF04073 Aminoacyl-tRNA editing domain NKI27_RS00695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NKI27_RS00695 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NKI27_RS00700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS00700 PF03466 LysR substrate binding domain NKI27_RS00705 PF01810 LysE type translocator NKI27_RS00710 PF03458 UPF0126 domain NKI27_RS00735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NKI27_RS00735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NKI27_RS00735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NKI27_RS00735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NKI27_RS00740 PF00483 Nucleotidyl transferase NKI27_RS00740 PF01050 Mannose-6-phosphate isomerase NKI27_RS00745 PF05426 Alginate lyase NKI27_RS00750 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX NKI27_RS00750 PF16824 C-terminal carbohydrate-binding module NKI27_RS00755 PF11182 Alginate O-acetyl transferase AlgF NKI27_RS00760 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX NKI27_RS00765 PF03062 MBOAT, membrane-bound O-acyltransferase family NKI27_RS00770 PF13229 Right handed beta helix region NKI27_RS00775 PF13372 Alginate export NKI27_RS00780 PF07238 PilZ domain NKI27_RS00790 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NKI27_RS00790 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NKI27_RS00790 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NKI27_RS00800 PF00561 alpha/beta hydrolase fold NKI27_RS00805 PF00743 Flavin-binding monooxygenase-like NKI27_RS00810 PF12833 Helix-turn-helix domain NKI27_RS00810 PF02311 AraC-like ligand binding domain NKI27_RS00820 PF00884 Sulfatase NKI27_RS00830 PF00175 Oxidoreductase NAD-binding domain NKI27_RS00830 PF00970 Oxidoreductase FAD-binding domain NKI27_RS00835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS00835 PF03466 LysR substrate binding domain NKI27_RS00840 PF07992 Pyridine nucleotide-disulphide oxidoreductase NKI27_RS00855 PF06039 Malate:quinone oxidoreductase (Mqo) NKI27_RS00860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS00860 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS00860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS00860 PF09317 Domain of unknown function (DUF1974) NKI27_RS00875 PF00012 Hsp70 protein NKI27_RS00880 PF00012 Hsp70 protein NKI27_RS00885 PF01810 LysE type translocator NKI27_RS00930 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NKI27_RS00950 PF00578 AhpC/TSA family NKI27_RS00955 PF00202 Aminotransferase class-III NKI27_RS00960 PF00175 Oxidoreductase NAD-binding domain NKI27_RS00960 PF00970 Oxidoreductase FAD-binding domain NKI27_RS00960 PF00042 Globin NKI27_RS00965 PF00487 Fatty acid desaturase NKI27_RS00975 PF01243 Pyridoxamine 5'-phosphate oxidase NKI27_RS00985 PF07715 TonB-dependent Receptor Plug Domain NKI27_RS00985 PF00593 TonB dependent receptor NKI27_RS00990 PF03544 Gram-negative bacterial TonB protein C-terminal NKI27_RS00995 PF01618 MotA/TolQ/ExbB proton channel family NKI27_RS01000 PF02472 Biopolymer transport protein ExbD/TolR NKI27_RS01010 PF01032 FecCD transport family NKI27_RS01015 PF00005 ABC transporter NKI27_RS01030 PF13091 PLD-like domain NKI27_RS01065 PF00011 Hsp20/alpha crystallin family NKI27_RS01070 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NKI27_RS01070 PF02805 Metal binding domain of Ada NKI27_RS01070 PF12833 Helix-turn-helix domain NKI27_RS01070 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NKI27_RS01075 PF00873 AcrB/AcrD/AcrF family NKI27_RS01085 PF02321 Outer membrane efflux protein NKI27_RS01090 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NKI27_RS01090 PF01266 FAD dependent oxidoreductase NKI27_RS01100 PF00012 Hsp70 protein NKI27_RS01115 PF00873 AcrB/AcrD/AcrF family NKI27_RS01130 PF00440 Bacterial regulatory proteins, tetR family NKI27_RS01135 PF01914 MarC family integral membrane protein NKI27_RS01155 PF12450 von Willebrand factor NKI27_RS01155 PF00092 von Willebrand factor type A domain NKI27_RS01155 PF12034 Domain of unknown function (DUF3520) NKI27_RS01160 PF00106 short chain dehydrogenase NKI27_RS01175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NKI27_RS01175 PF07992 Pyridine nucleotide-disulphide oxidoreductase NKI27_RS01180 PF00924 Mechanosensitive ion channel NKI27_RS01180 PF05552 Conserved TM helix NKI27_RS01195 PF03372 Endonuclease/Exonuclease/phosphatase family NKI27_RS01200 PF01590 GAF domain NKI27_RS01200 PF00391 PEP-utilising enzyme, mobile domain NKI27_RS01200 PF02896 PEP-utilising enzyme, TIM barrel domain NKI27_RS01200 PF05524 PEP-utilising enzyme, N-terminal NKI27_RS01210 PF00563 EAL domain NKI27_RS01210 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS01210 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS01220 PF08448 PAS fold NKI27_RS01220 PF08447 PAS fold NKI27_RS01220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS01260 PF08206 Ribonuclease B OB domain NKI27_RS01260 PF00773 RNB domain NKI27_RS01260 PF17876 Cold shock domain NKI27_RS01260 PF00575 S1 RNA binding domain NKI27_RS01275 PF00403 Heavy-metal-associated domain NKI27_RS01280 PF13411 MerR HTH family regulatory protein NKI27_RS01310 PF03006 Haemolysin-III related NKI27_RS01315 PF07859 alpha/beta hydrolase fold NKI27_RS01330 PF01541 GIY-YIG catalytic domain NKI27_RS01340 PF13380 CoA binding domain NKI27_RS01345 PF02152 Dihydroneopterin aldolase NKI27_RS01350 PF01227 GTP cyclohydrolase I NKI27_RS01360 PF00561 alpha/beta hydrolase fold NKI27_RS01365 PF02600 Disulfide bond formation protein DsbB NKI27_RS01370 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ NKI27_RS01380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NKI27_RS01380 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NKI27_RS01395 PF00005 ABC transporter NKI27_RS01395 PF12848 ABC transporter NKI27_RS01400 PF02798 Glutathione S-transferase, N-terminal domain NKI27_RS01405 PF02541 Ppx/GppA phosphatase family NKI27_RS01410 PF00085 Thioredoxin NKI27_RS01420 PF03264 NapC/NirT cytochrome c family, N-terminal region NKI27_RS01425 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) NKI27_RS01430 PF01568 Molydopterin dinucleotide binding domain NKI27_RS01430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NKI27_RS01430 PF00384 Molybdopterin oxidoreductase NKI27_RS01445 PF00672 HAMP domain NKI27_RS01445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS01445 PF07730 Histidine kinase NKI27_RS01445 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NKI27_RS01450 PF00196 Bacterial regulatory proteins, luxR family NKI27_RS01450 PF00072 Response regulator receiver domain NKI27_RS01455 PF12804 MobA-like NTP transferase domain NKI27_RS01460 PF02391 MoaE protein NKI27_RS01465 PF02597 ThiS family NKI27_RS01470 PF03453 MoeA N-terminal region (domain I and II) NKI27_RS01470 PF03454 MoeA C-terminal region (domain IV) NKI27_RS01470 PF00994 Probable molybdopterin binding domain NKI27_RS01475 PF00994 Probable molybdopterin binding domain NKI27_RS01485 PF07498 Rho termination factor, N-terminal domain NKI27_RS01485 PF07497 Rho termination factor, RNA-binding domain NKI27_RS01485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NKI27_RS01490 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NKI27_RS01495 PF00970 Oxidoreductase FAD-binding domain NKI27_RS01495 PF00175 Oxidoreductase NAD-binding domain NKI27_RS01500 PF07219 HemY protein N-terminus NKI27_RS01500 PF07719 Tetratricopeptide repeat NKI27_RS01505 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase NKI27_RS01510 PF02602 Uroporphyrinogen-III synthase HemD NKI27_RS01515 PF03900 Porphobilinogen deaminase, C-terminal domain NKI27_RS01515 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NKI27_RS01520 PF04397 LytTr DNA-binding domain NKI27_RS01520 PF00072 Response regulator receiver domain NKI27_RS01525 PF07694 5TMR of 5TMR-LYT NKI27_RS01525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS01525 PF06580 Histidine kinase NKI27_RS01530 PF14698 Argininosuccinate lyase C-terminal NKI27_RS01530 PF00206 Lyase NKI27_RS01535 PF07694 5TMR of 5TMR-LYT NKI27_RS01535 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS01540 PF12633 Adenylate cyclase NT domain NKI27_RS01540 PF01295 Adenylate cyclase, class-I NKI27_RS01550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NKI27_RS01550 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NKI27_RS01555 PF01678 Diaminopimelate epimerase NKI27_RS01570 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS01575 PF00072 Response regulator receiver domain NKI27_RS01575 PF01627 Hpt domain NKI27_RS01575 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS01590 PF00005 ABC transporter NKI27_RS01595 PF01032 FecCD transport family NKI27_RS01600 PF01497 Periplasmic binding protein NKI27_RS01605 PF07715 TonB-dependent Receptor Plug Domain NKI27_RS01605 PF00593 TonB dependent receptor NKI27_RS01610 PF00563 EAL domain NKI27_RS01610 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS01610 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS01610 PF13188 PAS domain NKI27_RS01620 PF01734 Patatin-like phospholipase NKI27_RS01635 PF13091 PLD-like domain NKI27_RS01650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NKI27_RS01650 PF00364 Biotin-requiring enzyme NKI27_RS01650 PF02817 e3 binding domain NKI27_RS01655 PF02779 Transketolase, pyrimidine binding domain NKI27_RS01655 PF02780 Transketolase, C-terminal domain NKI27_RS01660 PF00676 Dehydrogenase E1 component NKI27_RS01665 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NKI27_RS01665 PF12833 Helix-turn-helix domain NKI27_RS01670 PF07244 Surface antigen variable number repeat NKI27_RS01670 PF01103 Surface antigen NKI27_RS01670 PF17243 POTRA domain TamA domain 1 NKI27_RS01675 PF04357 TamB, inner membrane protein subunit of TAM complex NKI27_RS01720 PF08713 DNA alkylation repair enzyme NKI27_RS01735 PF02405 Permease MlaE NKI27_RS01740 PF00005 ABC transporter NKI27_RS01760 PF01645 Conserved region in glutamate synthase NKI27_RS01785 PF03313 Serine dehydratase alpha chain NKI27_RS01785 PF03315 Serine dehydratase beta chain NKI27_RS01790 PF07859 alpha/beta hydrolase fold NKI27_RS01795 PF00497 Bacterial extracellular solute-binding proteins, family 3 NKI27_RS01800 PF00313 'Cold-shock' DNA-binding domain NKI27_RS01805 PF00924 Mechanosensitive ion channel NKI27_RS01805 PF05552 Conserved TM helix NKI27_RS01810 PF10011 Predicted membrane protein (DUF2254) NKI27_RS01835 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NKI27_RS01840 PF03551 Transcriptional regulator PadR-like family NKI27_RS01840 PF10400 Virulence activator alpha C-term NKI27_RS01845 PF07992 Pyridine nucleotide-disulphide oxidoreductase NKI27_RS01845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NKI27_RS01850 PF13361 UvrD-like helicase C-terminal domain NKI27_RS01850 PF00580 UvrD/REP helicase N-terminal domain NKI27_RS01855 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS01855 PF00563 EAL domain NKI27_RS01855 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS01860 PF16921 Tex protein YqgF-like domain NKI27_RS01860 PF17674 HHH domain NKI27_RS01860 PF00575 S1 RNA binding domain NKI27_RS01860 PF09371 Tex-like protein N-terminal domain NKI27_RS01865 PF04262 Glutamate-cysteine ligase NKI27_RS01880 PF02743 Cache domain NKI27_RS01880 PF00672 HAMP domain NKI27_RS01880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NKI27_RS01900 PF01553 Acyltransferase NKI27_RS01910 PF00950 ABC 3 transport family NKI27_RS01915 PF00005 ABC transporter NKI27_RS01930 PF00072 Response regulator receiver domain NKI27_RS01930 PF01339 CheB methylesterase NKI27_RS01935 PF01584 CheW-like domain NKI27_RS01935 PF02895 Signal transducing histidine kinase, homodimeric domain NKI27_RS01935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS01935 PF01627 Hpt domain NKI27_RS01935 PF00072 Response regulator receiver domain NKI27_RS01940 PF01739 CheR methyltransferase, SAM binding domain NKI27_RS01940 PF03705 CheR methyltransferase, all-alpha domain NKI27_RS01945 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NKI27_RS01945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NKI27_RS01950 PF01584 CheW-like domain NKI27_RS01955 PF00072 Response regulator receiver domain NKI27_RS01960 PF00072 Response regulator receiver domain NKI27_RS01965 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NKI27_RS01965 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NKI27_RS01975 PF02622 Uncharacterized ACR, COG1678 NKI27_RS01980 PF03652 Holliday junction resolvase NKI27_RS01985 PF00156 Phosphoribosyl transferase domain NKI27_RS01990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NKI27_RS01990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NKI27_RS01995 PF01979 Amidohydrolase family NKI27_RS02000 PF01914 MarC family integral membrane protein NKI27_RS02005 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) NKI27_RS02010 PF00216 Bacterial DNA-binding protein NKI27_RS02035 PF01293 Phosphoenolpyruvate carboxykinase NKI27_RS02040 PF01430 Hsp33 protein NKI27_RS02045 PF01479 S4 domain NKI27_RS02050 PF13419 Haloacid dehalogenase-like hydrolase NKI27_RS02055 PF00459 Inositol monophosphatase family NKI27_RS02065 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NKI27_RS02065 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NKI27_RS02065 PF06827 Zinc finger found in FPG and IleRS NKI27_RS02080 PF00005 ABC transporter NKI27_RS02085 PF18075 FtsX extracellular domain NKI27_RS02090 PF00140 Sigma-70 factor, region 1.2 NKI27_RS02090 PF04542 Sigma-70 region 2 NKI27_RS02090 PF04545 Sigma-70, region 4 NKI27_RS02095 PF00226 DnaJ domain NKI27_RS02095 PF05099 Tellurite resistance protein TerB NKI27_RS02100 PF00072 Response regulator receiver domain NKI27_RS02100 PF00486 Transcriptional regulatory protein, C terminal NKI27_RS02105 PF18698 Histidine kinase sensor domain NKI27_RS02105 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS02105 PF00672 HAMP domain NKI27_RS02105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS02120 PF01272 Transcription elongation factor, GreA/GreB, C-term NKI27_RS02120 PF03449 Transcription elongation factor, N-terminal NKI27_RS02150 PF00672 HAMP domain NKI27_RS02150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS02150 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS02155 PF00072 Response regulator receiver domain NKI27_RS02155 PF00486 Transcriptional regulatory protein, C terminal NKI27_RS02160 PF01078 Magnesium chelatase, subunit ChlI NKI27_RS02160 PF17863 AAA lid domain NKI27_RS02160 PF13519 von Willebrand factor type A domain NKI27_RS02170 PF00392 Bacterial regulatory proteins, gntR family NKI27_RS02170 PF00155 Aminotransferase class I and II NKI27_RS02190 PF00691 OmpA family NKI27_RS02200 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NKI27_RS02200 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NKI27_RS02215 PF01734 Patatin-like phospholipase NKI27_RS02220 PF00743 Flavin-binding monooxygenase-like NKI27_RS02230 PF00580 UvrD/REP helicase N-terminal domain NKI27_RS02230 PF13361 UvrD-like helicase C-terminal domain NKI27_RS02245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NKI27_RS02245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NKI27_RS02250 PF00378 Enoyl-CoA hydratase/isomerase NKI27_RS02255 PF00378 Enoyl-CoA hydratase/isomerase NKI27_RS02260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS02260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS02260 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS02265 PF00171 Aldehyde dehydrogenase family NKI27_RS02270 PF02311 AraC-like ligand binding domain NKI27_RS02270 PF12833 Helix-turn-helix domain NKI27_RS02275 PF00762 Ferrochelatase NKI27_RS02285 PF00034 Cytochrome c NKI27_RS02290 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NKI27_RS02290 PF11892 Domain of unknown function (DUF3412) NKI27_RS02290 PF03641 Possible lysine decarboxylase NKI27_RS02295 PF02926 THUMP domain NKI27_RS02295 PF02568 Thiamine biosynthesis protein (ThiI) NKI27_RS02300 PF00440 Bacterial regulatory proteins, tetR family NKI27_RS02300 PF02909 Tetracyclin repressor-like, C-terminal domain NKI27_RS02305 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NKI27_RS02315 PF05199 GMC oxidoreductase NKI27_RS02315 PF00732 GMC oxidoreductase NKI27_RS02325 PF00171 Aldehyde dehydrogenase family NKI27_RS02340 PF00465 Iron-containing alcohol dehydrogenase NKI27_RS02350 PF00892 EamA-like transporter family NKI27_RS02355 PF11849 Domain of unknown function (DUF3369) NKI27_RS02365 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NKI27_RS02365 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NKI27_RS02375 PF08240 Alcohol dehydrogenase GroES-like domain NKI27_RS02375 PF00107 Zinc-binding dehydrogenase NKI27_RS02380 PF00924 Mechanosensitive ion channel NKI27_RS02390 PF00120 Glutamine synthetase, catalytic domain NKI27_RS02395 PF00171 Aldehyde dehydrogenase family NKI27_RS02400 PF00465 Iron-containing alcohol dehydrogenase NKI27_RS02405 PF00117 Glutamine amidotransferase class-I NKI27_RS02405 PF00958 GMP synthase C terminal domain NKI27_RS02405 PF02540 NAD synthase NKI27_RS02410 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS02415 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS02420 PF00005 ABC transporter NKI27_RS02420 PF08402 TOBE domain NKI27_RS02425 PF13416 Bacterial extracellular solute-binding protein NKI27_RS02430 PF04237 YjbR NKI27_RS02435 PF01177 Asp/Glu/Hydantoin racemase NKI27_RS02440 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NKI27_RS02445 PF01638 HxlR-like helix-turn-helix NKI27_RS02450 PF00384 Molybdopterin oxidoreductase NKI27_RS02450 PF01568 Molydopterin dinucleotide binding domain NKI27_RS02465 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS02465 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS02465 PF00563 EAL domain NKI27_RS02470 PF00580 UvrD/REP helicase N-terminal domain NKI27_RS02470 PF13361 UvrD-like helicase C-terminal domain NKI27_RS02475 PF03480 Bacterial extracellular solute-binding protein, family 7 NKI27_RS02490 PF08479 POTRA domain, ShlB-type NKI27_RS02490 PF17287 POTRA domain NKI27_RS02490 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NKI27_RS02495 PF04829 Pre-toxin domain with VENN motif NKI27_RS02495 PF05860 haemagglutination activity domain NKI27_RS02495 PF13332 Hemagglutinin repeat NKI27_RS02495 PF15526 Novel toxin 21 NKI27_RS02495 PF05594 Haemagluttinin repeat NKI27_RS02500 PF04829 Pre-toxin domain with VENN motif NKI27_RS02500 PF13332 Hemagglutinin repeat NKI27_RS02500 PF05860 haemagglutination activity domain NKI27_RS02530 PF04143 Sulphur transport NKI27_RS02540 PF00501 AMP-binding enzyme NKI27_RS02540 PF13193 AMP-binding enzyme C-terminal domain NKI27_RS02570 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS02570 PF00563 EAL domain NKI27_RS02570 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS02575 PF00085 Thioredoxin NKI27_RS02585 PF13409 Glutathione S-transferase, N-terminal domain NKI27_RS02590 PF01464 Transglycosylase SLT domain NKI27_RS02590 PF14718 Soluble lytic murein transglycosylase L domain NKI27_RS02600 PF03006 Haemolysin-III related NKI27_RS02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS02605 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS02605 PF00989 PAS fold NKI27_RS02605 PF16736 Single Cache-like NKI27_RS02610 PF00486 Transcriptional regulatory protein, C terminal NKI27_RS02610 PF00072 Response regulator receiver domain NKI27_RS02615 PF00672 HAMP domain NKI27_RS02615 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS02615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS02615 PF16527 Two-component sensor protein CpxA, periplasmic domain NKI27_RS02620 PF00486 Transcriptional regulatory protein, C terminal NKI27_RS02620 PF00072 Response regulator receiver domain NKI27_RS02630 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS02630 PF01627 Hpt domain NKI27_RS02630 PF00072 Response regulator receiver domain NKI27_RS02630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NKI27_RS02630 PF00672 HAMP domain NKI27_RS02630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS02635 PF00218 Indole-3-glycerol phosphate synthase NKI27_RS02640 PF00591 Glycosyl transferase family, a/b domain NKI27_RS02640 PF02885 Glycosyl transferase family, helical bundle domain NKI27_RS02645 PF00117 Glutamine amidotransferase class-I NKI27_RS02650 PF04715 Anthranilate synthase component I, N terminal region NKI27_RS02650 PF00425 chorismate binding enzyme NKI27_RS02655 PF13419 Haloacid dehalogenase-like hydrolase NKI27_RS02660 PF00834 Ribulose-phosphate 3 epimerase family NKI27_RS02670 PF00483 Nucleotidyl transferase NKI27_RS02675 PF01636 Phosphotransferase enzyme family NKI27_RS02680 PF04453 LPS transport system D NKI27_RS02685 PF00639 PPIC-type PPIASE domain NKI27_RS02685 PF09312 SurA N-terminal domain NKI27_RS02690 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NKI27_RS02695 PF00398 Ribosomal RNA adenine dimethylase NKI27_RS02700 PF00149 Calcineurin-like phosphoesterase NKI27_RS02705 PF04241 Protein of unknown function (DUF423) NKI27_RS02710 PF05690 Thiazole biosynthesis protein ThiG NKI27_RS02710 PF02597 ThiS family NKI27_RS02715 PF05690 Thiazole biosynthesis protein ThiG NKI27_RS02720 PF00440 Bacterial regulatory proteins, tetR family NKI27_RS02740 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS02740 PF00072 Response regulator receiver domain NKI27_RS02745 PF03144 Elongation factor Tu domain 2 NKI27_RS02745 PF14492 Elongation Factor G, domain II NKI27_RS02745 PF03764 Elongation factor G, domain IV NKI27_RS02745 PF00679 Elongation factor G C-terminus NKI27_RS02745 PF00009 Elongation factor Tu GTP binding domain NKI27_RS02755 PF00873 AcrB/AcrD/AcrF family NKI27_RS02760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NKI27_RS02765 PF00800 Prephenate dehydratase NKI27_RS02765 PF01817 Chorismate mutase type II NKI27_RS02785 PF00793 DAHP synthetase I family NKI27_RS02795 PF00462 Glutaredoxin NKI27_RS02795 PF08534 Redoxin NKI27_RS02800 PF07992 Pyridine nucleotide-disulphide oxidoreductase NKI27_RS02800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NKI27_RS02805 PF03616 Sodium/glutamate symporter NKI27_RS02830 PF00892 EamA-like transporter family NKI27_RS02845 PF01774 UreD urease accessory protein NKI27_RS02850 PF00547 Urease, gamma subunit NKI27_RS02855 PF00699 Urease beta subunit NKI27_RS02860 PF00449 Urease alpha-subunit, N-terminal domain NKI27_RS02860 PF01979 Amidohydrolase family NKI27_RS02865 PF02814 UreE urease accessory protein, N-terminal domain NKI27_RS02865 PF05194 UreE urease accessory protein, C-terminal domain NKI27_RS02870 PF01730 UreF NKI27_RS02875 PF02492 CobW/HypB/UreG, nucleotide-binding domain NKI27_RS02880 PF04955 HupE / UreJ protein NKI27_RS02885 PF00072 Response regulator receiver domain NKI27_RS02885 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS02890 PF02843 Phosphoribosylglycinamide synthetase, C domain NKI27_RS02890 PF02844 Phosphoribosylglycinamide synthetase, N domain NKI27_RS02890 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NKI27_RS02895 PF01808 AICARFT/IMPCHase bienzyme NKI27_RS02895 PF02142 MGS-like domain NKI27_RS02905 PF01207 Dihydrouridine synthase (Dus) NKI27_RS02920 PF02785 Biotin carboxylase C-terminal domain NKI27_RS02920 PF00289 Biotin carboxylase, N-terminal domain NKI27_RS02920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NKI27_RS02925 PF00364 Biotin-requiring enzyme NKI27_RS02930 PF01220 Dehydroquinase class II NKI27_RS02935 PF00072 Response regulator receiver domain NKI27_RS02935 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS02940 PF00563 EAL domain NKI27_RS02940 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS02940 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS02950 PF05573 NosL NKI27_RS02955 PF12679 ABC-2 family transporter protein NKI27_RS02960 PF00005 ABC transporter NKI27_RS02965 PF05048 Periplasmic copper-binding protein (NosD) NKI27_RS02970 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NKI27_RS02970 PF18793 Nitrous oxide reductase propeller repeat 2 NKI27_RS02970 PF18764 Nitrous oxide reductase propeller repeat NKI27_RS02975 PF04205 FMN-binding domain NKI27_RS02975 PF12801 4Fe-4S binding domain NKI27_RS02985 PF00719 Inorganic pyrophosphatase NKI27_RS02990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS02990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS02990 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS03000 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS03000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS03000 PF00072 Response regulator receiver domain NKI27_RS03000 PF09308 LuxQ, periplasmic NKI27_RS03015 PF03591 AzlC protein NKI27_RS03045 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NKI27_RS03050 PF02654 Cobalamin-5-phosphate synthase NKI27_RS03055 PF07690 Major Facilitator Superfamily NKI27_RS03060 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS03060 PF00563 EAL domain NKI27_RS03060 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS03065 PF07992 Pyridine nucleotide-disulphide oxidoreductase NKI27_RS03065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NKI27_RS03070 PF16925 Tetracyclin repressor-like, C-terminal domain NKI27_RS03070 PF00440 Bacterial regulatory proteins, tetR family NKI27_RS03075 PF00585 C-terminal regulatory domain of Threonine dehydratase NKI27_RS03075 PF00291 Pyridoxal-phosphate dependent enzyme NKI27_RS03085 PF01812 5-formyltetrahydrofolate cyclo-ligase family NKI27_RS03095 PF05164 Cell division protein ZapA NKI27_RS03110 PF00557 Metallopeptidase family M24 NKI27_RS03110 PF05195 Aminopeptidase P, N-terminal domain NKI27_RS03115 PF01494 FAD binding domain NKI27_RS03120 PF01494 FAD binding domain NKI27_RS03130 PF04452 RNA methyltransferase NKI27_RS03135 PF00902 Sec-independent protein translocase protein (TatC) NKI27_RS03140 PF02416 mttA/Hcf106 family NKI27_RS03145 PF02416 mttA/Hcf106 family NKI27_RS03150 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NKI27_RS03155 PF01502 Phosphoribosyl-AMP cyclohydrolase NKI27_RS03160 PF03109 ABC1 family NKI27_RS03170 PF01209 ubiE/COQ5 methyltransferase family NKI27_RS03180 PF00501 AMP-binding enzyme NKI27_RS03180 PF13193 AMP-binding enzyme C-terminal domain NKI27_RS03190 PF00378 Enoyl-CoA hydratase/isomerase NKI27_RS03230 PF00700 Bacterial flagellin C-terminal helical region NKI27_RS03230 PF00669 Bacterial flagellin N-terminal helical region NKI27_RS03235 PF03435 Saccharopine dehydrogenase NADP binding domain NKI27_RS03240 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS03265 PF00487 Fatty acid desaturase NKI27_RS03270 PF00175 Oxidoreductase NAD-binding domain NKI27_RS03270 PF00111 2Fe-2S iron-sulfur cluster binding domain NKI27_RS03270 PF00970 Oxidoreductase FAD-binding domain NKI27_RS03275 PF00440 Bacterial regulatory proteins, tetR family NKI27_RS03285 PF03069 Acetamidase/Formamidase family NKI27_RS03290 PF00005 ABC transporter NKI27_RS03295 PF12399 Branched-chain amino acid ATP-binding cassette transporter NKI27_RS03295 PF00005 ABC transporter NKI27_RS03315 PF00072 Response regulator receiver domain NKI27_RS03315 PF00989 PAS fold NKI27_RS03315 PF01627 Hpt domain NKI27_RS03315 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS03315 PF18415 Histidine kinase receptor ArcB trans-membrane domain NKI27_RS03320 PF00072 Response regulator receiver domain NKI27_RS03320 PF00486 Transcriptional regulatory protein, C terminal NKI27_RS03330 PF00270 DEAD/DEAH box helicase NKI27_RS03330 PF00271 Helicase conserved C-terminal domain NKI27_RS03330 PF00570 HRDC domain NKI27_RS03330 PF16124 RecQ zinc-binding NKI27_RS03330 PF09382 RQC domain NKI27_RS03335 PF17151 Periplasmic sensor domain NKI27_RS03335 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS03340 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS03340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS03350 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS03360 PF00072 Response regulator receiver domain NKI27_RS03360 PF00158 Sigma-54 interaction domain NKI27_RS03380 PF13411 MerR HTH family regulatory protein NKI27_RS03385 PF08338 Domain of unknown function (DUF1731) NKI27_RS03385 PF01370 NAD dependent epimerase/dehydratase family NKI27_RS03395 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS03395 PF17158 Membrane-associated sensor, integral membrane domain NKI27_RS03425 PF00266 Aminotransferase class-V NKI27_RS03445 PF00271 Helicase conserved C-terminal domain NKI27_RS03445 PF04851 Type III restriction enzyme, res subunit NKI27_RS03445 PF02151 UvrB/uvrC motif NKI27_RS03445 PF12344 Ultra-violet resistance protein B NKI27_RS03445 PF17757 UvrB interaction domain NKI27_RS03505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NKI27_RS03505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NKI27_RS03510 PF00890 FAD binding domain NKI27_RS03515 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal NKI27_RS03515 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal NKI27_RS03525 PF01668 SmpB protein NKI27_RS03530 PF00209 Sodium:neurotransmitter symporter family NKI27_RS03535 PF03364 Polyketide cyclase / dehydrase and lipid transport NKI27_RS03540 PF03658 RnfH family Ubiquitin NKI27_RS03545 PF04355 SmpA / OmlA family NKI27_RS03550 PF01475 Ferric uptake regulator family NKI27_RS03555 PF02463 RecF/RecN/SMC N terminal domain NKI27_RS03560 PF01025 GrpE NKI27_RS03565 PF00012 Hsp70 protein NKI27_RS03570 PF00684 DnaJ central domain NKI27_RS03570 PF00226 DnaJ domain NKI27_RS03570 PF01556 DnaJ C terminal domain NKI27_RS03575 PF01113 Dihydrodipicolinate reductase, N-terminus NKI27_RS03575 PF05173 Dihydrodipicolinate reductase, C-terminus NKI27_RS03580 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NKI27_RS03580 PF00117 Glutamine amidotransferase class-I NKI27_RS03585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NKI27_RS03585 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NKI27_RS03585 PF02142 MGS-like domain NKI27_RS03590 PF01272 Transcription elongation factor, GreA/GreB, C-term NKI27_RS03590 PF03449 Transcription elongation factor, N-terminal NKI27_RS03595 PF01985 CRS1 / YhbY (CRM) domain NKI27_RS03600 PF01728 FtsJ-like methyltransferase NKI27_RS03605 PF01434 Peptidase family M41 NKI27_RS03605 PF06480 FtsH Extracellular NKI27_RS03605 PF00004 ATPase family associated with various cellular activities (AAA) NKI27_RS03605 PF17862 AAA+ lid domain NKI27_RS03610 PF00809 Pterin binding enzyme NKI27_RS03615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NKI27_RS03615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NKI27_RS03615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NKI27_RS03615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NKI27_RS03620 PF00121 Triosephosphate isomerase NKI27_RS03625 PF03840 Preprotein translocase SecG subunit NKI27_RS03635 PF17384 RimP C-terminal SH3 domain NKI27_RS03635 PF02576 RimP N-terminal domain NKI27_RS03640 PF00575 S1 RNA binding domain NKI27_RS03640 PF13184 NusA-like KH domain NKI27_RS03640 PF08529 NusA N-terminal domain NKI27_RS03645 PF04760 Translation initiation factor IF-2, N-terminal region NKI27_RS03645 PF08364 Bacterial translation initiation factor IF-2 associated region NKI27_RS03645 PF11987 Translation-initiation factor 2 NKI27_RS03645 PF00009 Elongation factor Tu GTP binding domain NKI27_RS03650 PF02033 Ribosome-binding factor A NKI27_RS03655 PF16198 tRNA pseudouridylate synthase B C-terminal domain NKI27_RS03655 PF09157 Pseudouridine synthase II TruB, C-terminal NKI27_RS03655 PF01509 TruB family pseudouridylate synthase (N terminal domain) NKI27_RS03660 PF00312 Ribosomal protein S15 NKI27_RS03665 PF01138 3' exoribonuclease family, domain 1 NKI27_RS03665 PF03725 3' exoribonuclease family, domain 2 NKI27_RS03665 PF00575 S1 RNA binding domain NKI27_RS03665 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NKI27_RS03665 PF00013 KH domain NKI27_RS03670 PF12146 Serine aminopeptidase, S33 NKI27_RS03690 PF00005 ABC transporter NKI27_RS03695 PF00005 ABC transporter NKI27_RS03695 PF12399 Branched-chain amino acid ATP-binding cassette transporter NKI27_RS03700 PF02653 Branched-chain amino acid transport system / permease component NKI27_RS03700 PF11862 Domain of unknown function (DUF3382) NKI27_RS03705 PF02653 Branched-chain amino acid transport system / permease component NKI27_RS03710 PF13458 Periplasmic binding protein NKI27_RS03740 PF00456 Transketolase, thiamine diphosphate binding domain NKI27_RS03740 PF17831 Pyruvate dehydrogenase E1 component middle domain NKI27_RS03745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NKI27_RS03745 PF00364 Biotin-requiring enzyme NKI27_RS03745 PF02817 e3 binding domain NKI27_RS03750 PF00465 Iron-containing alcohol dehydrogenase NKI27_RS03755 PF01467 Cytidylyltransferase-like NKI27_RS03765 PF00313 'Cold-shock' DNA-binding domain NKI27_RS03770 PF06974 Protein of unknown function (DUF1298) NKI27_RS03770 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NKI27_RS03790 PF13307 Helicase C-terminal domain NKI27_RS03790 PF04851 Type III restriction enzyme, res subunit NKI27_RS03790 PF00929 Exonuclease NKI27_RS03795 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS03795 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS03795 PF00563 EAL domain NKI27_RS03805 PF00111 2Fe-2S iron-sulfur cluster binding domain NKI27_RS03805 PF01799 [2Fe-2S] binding domain NKI27_RS03810 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NKI27_RS03835 PF00989 PAS fold NKI27_RS03835 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS03835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS03840 PF00072 Response regulator receiver domain NKI27_RS03845 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS03845 PF00563 EAL domain NKI27_RS03845 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS03850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NKI27_RS03855 PF17876 Cold shock domain NKI27_RS03855 PF08461 Ribonuclease R winged-helix domain NKI27_RS03855 PF08206 Ribonuclease B OB domain NKI27_RS03855 PF00773 RNB domain NKI27_RS03855 PF00575 S1 RNA binding domain NKI27_RS03860 PF00588 SpoU rRNA Methylase family NKI27_RS03860 PF08032 RNA 2'-O ribose methyltransferase substrate binding NKI27_RS03865 PF01250 Ribosomal protein S6 NKI27_RS03870 PF01084 Ribosomal protein S18 NKI27_RS03880 PF03948 Ribosomal protein L9, C-terminal domain NKI27_RS03880 PF01281 Ribosomal protein L9, N-terminal domain NKI27_RS03885 PF00772 DnaB-like helicase N terminal domain NKI27_RS03885 PF03796 DnaB-like helicase C terminal domain NKI27_RS03890 PF00842 Alanine racemase, C-terminal domain NKI27_RS03890 PF01168 Alanine racemase, N-terminal domain NKI27_RS03900 PF00027 Cyclic nucleotide-binding domain NKI27_RS03900 PF00325 Bacterial regulatory proteins, crp family NKI27_RS03910 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NKI27_RS03910 PF03625 Domain of unknown function DUF302 NKI27_RS03930 PF00563 EAL domain NKI27_RS03930 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS03930 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS04000 PF00487 Fatty acid desaturase NKI27_RS04005 PF00970 Oxidoreductase FAD-binding domain NKI27_RS04005 PF00111 2Fe-2S iron-sulfur cluster binding domain NKI27_RS04005 PF00175 Oxidoreductase NAD-binding domain NKI27_RS04010 PF12833 Helix-turn-helix domain NKI27_RS04010 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NKI27_RS04015 PF00313 'Cold-shock' DNA-binding domain NKI27_RS04025 PF18339 RapA N-terminal Tudor like domain 1 NKI27_RS04025 PF18337 RapA N-terminal Tudor like domain NKI27_RS04025 PF12137 RNA polymerase recycling family C-terminal NKI27_RS04025 PF00271 Helicase conserved C-terminal domain NKI27_RS04025 PF00176 SNF2 family N-terminal domain NKI27_RS04085 PF03793 PASTA domain NKI27_RS04085 PF00069 Protein kinase domain NKI27_RS04110 PF00270 DEAD/DEAH box helicase NKI27_RS04110 PF08494 DEAD/H associated NKI27_RS04110 PF00271 Helicase conserved C-terminal domain NKI27_RS04165 PF01926 50S ribosome-binding GTPase NKI27_RS04165 PF06071 Protein of unknown function (DUF933) NKI27_RS04170 PF01195 Peptidyl-tRNA hydrolase NKI27_RS04175 PF14693 Ribosomal protein TL5, C-terminal domain NKI27_RS04175 PF01386 Ribosomal L25p family NKI27_RS04180 PF14572 Phosphoribosyl synthetase-associated domain NKI27_RS04180 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NKI27_RS04190 PF08544 GHMP kinases C terminal NKI27_RS04190 PF00288 GHMP kinases N terminal domain NKI27_RS04195 PF03550 Outer membrane lipoprotein LolB NKI27_RS04205 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NKI27_RS04205 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NKI27_RS04205 PF01488 Shikimate / quinate 5-dehydrogenase NKI27_RS04210 PF03462 PCRF domain NKI27_RS04210 PF00472 RF-1 domain NKI27_RS04215 PF17827 PrmC N-terminal domain NKI27_RS04215 PF13847 Methyltransferase domain NKI27_RS04220 PF00899 ThiF family NKI27_RS04235 PF03466 LysR substrate binding domain NKI27_RS04235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS04240 PF02562 PhoH-like protein NKI27_RS04240 PF13638 PIN domain NKI27_RS04260 PF03776 Septum formation topological specificity factor MinE NKI27_RS04265 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NKI27_RS04270 PF03775 Septum formation inhibitor MinC, C-terminal domain NKI27_RS04270 PF05209 Septum formation inhibitor MinC, N-terminal domain NKI27_RS04275 PF00817 impB/mucB/samB family NKI27_RS04275 PF11799 impB/mucB/samB family C-terminal domain NKI27_RS04275 PF11798 IMS family HHH motif NKI27_RS04280 PF00521 DNA gyrase/topoisomerase IV, subunit A NKI27_RS04280 PF03989 DNA gyrase C-terminal domain, beta-propeller NKI27_RS04290 PF00563 EAL domain NKI27_RS04290 PF05231 MASE1 NKI27_RS04300 PF04055 Radical SAM superfamily NKI27_RS04305 PF09285 Elongation factor P, C-terminal NKI27_RS04305 PF01132 Elongation factor P (EF-P) OB domain NKI27_RS04305 PF08207 Elongation factor P (EF-P) KOW-like domain NKI27_RS04310 PF00152 tRNA synthetases class II (D, K and N) NKI27_RS04315 PF02666 Phosphatidylserine decarboxylase NKI27_RS04320 PF00581 Rhodanese-like domain NKI27_RS04330 PF01618 MotA/TolQ/ExbB proton channel family NKI27_RS04335 PF00691 OmpA family NKI27_RS04335 PF13677 Membrane MotB of proton-channel complex MotA/MotB NKI27_RS04340 PF03193 RsgA GTPase NKI27_RS04345 PF00929 Exonuclease NKI27_RS04350 PF08331 Domain of unknown function (DUF1730) NKI27_RS04355 PF01256 Carbohydrate kinase NKI27_RS04355 PF03853 YjeF-related protein N-terminus NKI27_RS04360 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NKI27_RS04365 PF11741 AMIN domain NKI27_RS04365 PF01520 N-acetylmuramoyl-L-alanine amidase NKI27_RS04370 PF08676 MutL C terminal dimerisation domain NKI27_RS04370 PF01119 DNA mismatch repair protein, C-terminal domain NKI27_RS04380 PF17209 Hfq protein NKI27_RS04385 PF16360 GTP-binding GTPase Middle Region NKI27_RS04385 PF13167 GTP-binding GTPase N-terminal NKI27_RS04385 PF01926 50S ribosome-binding GTPase NKI27_RS04390 PF01145 SPFH domain / Band 7 family NKI27_RS04390 PF12221 Bacterial membrane protein N terminal NKI27_RS04395 PF01145 SPFH domain / Band 7 family NKI27_RS04405 PF13393 Histidyl-tRNA synthetase NKI27_RS04410 PF00709 Adenylosuccinate synthetase NKI27_RS04415 PF08003 Protein of unknown function (DUF1698) NKI27_RS04420 PF13649 Methyltransferase domain NKI27_RS04435 PF01636 Phosphotransferase enzyme family NKI27_RS04455 PF01266 FAD dependent oxidoreductase NKI27_RS04460 PF00202 Aminotransferase class-III NKI27_RS04465 PF04958 Arginine N-succinyltransferase beta subunit NKI27_RS04470 PF04958 Arginine N-succinyltransferase beta subunit NKI27_RS04475 PF00171 Aldehyde dehydrogenase family NKI27_RS04480 PF04996 Succinylarginine dihydrolase NKI27_RS04485 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NKI27_RS04490 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS04495 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS04500 PF00497 Bacterial extracellular solute-binding proteins, family 3 NKI27_RS04505 PF00005 ABC transporter NKI27_RS04540 PF04362 Bacterial Fe(2+) trafficking NKI27_RS04545 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS04545 PF00563 EAL domain NKI27_RS04545 PF01590 GAF domain NKI27_RS04545 PF00360 Phytochrome region NKI27_RS04550 PF14815 NUDIX domain NKI27_RS04550 PF00730 HhH-GPD superfamily base excision DNA repair protein NKI27_RS04565 PF00475 Imidazoleglycerol-phosphate dehydratase NKI27_RS04570 PF00117 Glutamine amidotransferase class-I NKI27_RS04575 PF00977 Histidine biosynthesis protein NKI27_RS04580 PF00977 Histidine biosynthesis protein NKI27_RS04590 PF04748 Divergent polysaccharide deacetylase NKI27_RS04600 PF01551 Peptidase family M23 NKI27_RS04605 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NKI27_RS04605 PF01676 Metalloenzyme superfamily NKI27_RS04610 PF00581 Rhodanese-like domain NKI27_RS04615 PF00462 Glutaredoxin NKI27_RS04620 PF02556 Preprotein translocase subunit SecB NKI27_RS04625 PF00588 SpoU rRNA Methylase family NKI27_RS04630 PF00108 Thiolase, N-terminal domain NKI27_RS04630 PF02803 Thiolase, C-terminal domain NKI27_RS04640 PF01966 HD domain NKI27_RS04640 PF01743 Poly A polymerase head domain NKI27_RS04640 PF12627 Probable RNA and SrmB- binding site of polymerase A NKI27_RS04655 PF08245 Mur ligase middle domain NKI27_RS04655 PF02875 Mur ligase family, glutamate ligase domain NKI27_RS04655 PF01225 Mur ligase family, catalytic domain NKI27_RS04660 PF02441 Flavoprotein NKI27_RS04665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS04665 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS04665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS04675 PF05199 GMC oxidoreductase NKI27_RS04680 PF07690 Major Facilitator Superfamily NKI27_RS04690 PF00860 Permease family NKI27_RS04695 PF01132 Elongation factor P (EF-P) OB domain NKI27_RS04695 PF08207 Elongation factor P (EF-P) KOW-like domain NKI27_RS04695 PF09285 Elongation factor P, C-terminal NKI27_RS04700 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NKI27_RS04700 PF12557 Cob(I)alamin adenosyltransferase N terminal NKI27_RS04715 PF00210 Ferritin-like domain NKI27_RS04720 PF00210 Ferritin-like domain NKI27_RS04730 PF00005 ABC transporter NKI27_RS04735 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS04755 PF00005 ABC transporter NKI27_RS04760 PF01032 FecCD transport family NKI27_RS04775 PF00672 HAMP domain NKI27_RS04775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS04775 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS04775 PF16750 Sensor domain of 2-component histidine kinase NKI27_RS04780 PF00486 Transcriptional regulatory protein, C terminal NKI27_RS04780 PF00072 Response regulator receiver domain NKI27_RS04785 PF07715 TonB-dependent Receptor Plug Domain NKI27_RS04785 PF00593 TonB dependent receptor NKI27_RS04790 PF03929 PepSY-associated TM region NKI27_RS04800 PF03544 Gram-negative bacterial TonB protein C-terminal NKI27_RS04805 PF02472 Biopolymer transport protein ExbD/TolR NKI27_RS04810 PF01618 MotA/TolQ/ExbB proton channel family NKI27_RS04815 PF01618 MotA/TolQ/ExbB proton channel family NKI27_RS04845 PF00005 ABC transporter NKI27_RS04850 PF00950 ABC 3 transport family NKI27_RS04870 PF00258 Flavodoxin NKI27_RS04880 PF06968 Biotin and Thiamin Synthesis associated domain NKI27_RS04880 PF04055 Radical SAM superfamily NKI27_RS04885 PF00155 Aminotransferase class I and II NKI27_RS04890 PF12697 Alpha/beta hydrolase family NKI27_RS04890 PF08241 Methyltransferase domain NKI27_RS04895 PF12697 Alpha/beta hydrolase family NKI27_RS04895 PF08241 Methyltransferase domain NKI27_RS04915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS04915 PF12806 Acetyl-CoA dehydrogenase C-terminal like NKI27_RS04915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS04915 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS04920 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS04920 PF12806 Acetyl-CoA dehydrogenase C-terminal like NKI27_RS04920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS04920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS04925 PF04231 Endonuclease I NKI27_RS04930 PF14840 Processivity clamp loader gamma complex DNA pol III C-term NKI27_RS04930 PF06144 DNA polymerase III, delta subunit NKI27_RS04940 PF00133 tRNA synthetases class I (I, L, M and V) NKI27_RS04940 PF13603 Leucyl-tRNA synthetase, Domain 2 NKI27_RS04940 PF08264 Anticodon-binding domain of tRNA NKI27_RS04950 PF00795 Carbon-nitrogen hydrolase NKI27_RS04955 PF00571 CBS domain NKI27_RS04955 PF03471 Transporter associated domain NKI27_RS04960 PF02130 Uncharacterized protein family UPF0054 NKI27_RS04965 PF02562 PhoH-like protein NKI27_RS04980 PF12105 SpoU, rRNA methylase, C-terminal NKI27_RS04980 PF00588 SpoU rRNA Methylase family NKI27_RS04985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS04985 PF03466 LysR substrate binding domain NKI27_RS04995 PF16884 N-terminal domain of oxidoreductase NKI27_RS04995 PF00107 Zinc-binding dehydrogenase NKI27_RS05010 PF00271 Helicase conserved C-terminal domain NKI27_RS05010 PF03880 DbpA RNA binding domain NKI27_RS05010 PF00270 DEAD/DEAH box helicase NKI27_RS05015 PF01554 MatE NKI27_RS05030 PF00128 Alpha amylase, catalytic domain NKI27_RS05050 PF04245 37-kD nucleoid-associated bacterial protein NKI27_RS05055 PF00009 Elongation factor Tu GTP binding domain NKI27_RS05060 PF01507 Phosphoadenosine phosphosulfate reductase family NKI27_RS05075 PF18693 TRAM domain NKI27_RS05075 PF00919 Uncharacterized protein family UPF0004 NKI27_RS05075 PF04055 Radical SAM superfamily NKI27_RS05080 PF01648 4'-phosphopantetheinyl transferase superfamily NKI27_RS05085 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NKI27_RS05085 PF00072 Response regulator receiver domain NKI27_RS05085 PF01627 Hpt domain NKI27_RS05085 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS05085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS05085 PF00672 HAMP domain NKI27_RS05090 PF00291 Pyridoxal-phosphate dependent enzyme NKI27_RS05095 PF05958 tRNA (Uracil-5-)-methyltransferase NKI27_RS05100 PF13291 ACT domain NKI27_RS05100 PF04607 Region found in RelA / SpoT proteins NKI27_RS05100 PF02824 TGS domain NKI27_RS05105 PF03819 MazG nucleotide pyrophosphohydrolase domain NKI27_RS05110 PF07715 TonB-dependent Receptor Plug Domain NKI27_RS05110 PF00593 TonB dependent receptor NKI27_RS05115 PF08448 PAS fold NKI27_RS05115 PF00563 EAL domain NKI27_RS05115 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS05120 PF00360 Phytochrome region NKI27_RS05120 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS05120 PF08446 PAS fold NKI27_RS05120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS05120 PF01590 GAF domain NKI27_RS05130 PF00311 Phosphoenolpyruvate carboxylase NKI27_RS05140 PF05191 Adenylate kinase, active site lid NKI27_RS05145 PF00814 Glycoprotease family NKI27_RS05150 PF02673 Bacitracin resistance protein BacA NKI27_RS05160 PF04445 Putative SAM-dependent methyltransferase NKI27_RS05165 PF01553 Acyltransferase NKI27_RS05170 PF00005 ABC transporter NKI27_RS05185 PF01177 Asp/Glu/Hydantoin racemase NKI27_RS05190 PF00497 Bacterial extracellular solute-binding proteins, family 3 NKI27_RS05205 PF00563 EAL domain NKI27_RS05205 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS05205 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS05210 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS05215 PF10609 NUBPL iron-transfer P-loop NTPase NKI27_RS05230 PF16177 Acetyl-coenzyme A synthetase N-terminus NKI27_RS05230 PF00501 AMP-binding enzyme NKI27_RS05230 PF13193 AMP-binding enzyme C-terminal domain NKI27_RS05235 PF00196 Bacterial regulatory proteins, luxR family NKI27_RS05235 PF00072 Response regulator receiver domain NKI27_RS05240 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS05240 PF00072 Response regulator receiver domain NKI27_RS05245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS05245 PF03466 LysR substrate binding domain NKI27_RS05250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS05250 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS05250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS05280 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS05280 PF00563 EAL domain NKI27_RS05280 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS05295 PF00072 Response regulator receiver domain NKI27_RS05295 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS05295 PF00672 HAMP domain NKI27_RS05295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS05295 PF01627 Hpt domain NKI27_RS05305 PF00474 Sodium:solute symporter family NKI27_RS05310 PF13495 Phage integrase, N-terminal SAM-like domain NKI27_RS05310 PF00589 Phage integrase family NKI27_RS05315 PF02659 Putative manganese efflux pump NKI27_RS05325 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NKI27_RS05330 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system NKI27_RS05345 PF08378 Nuclease-related domain NKI27_RS05480 PF13005 zinc-finger binding domain of transposase IS66 NKI27_RS05480 PF03050 Transposase IS66 family NKI27_RS05480 PF13817 IS66 C-terminal element NKI27_RS05480 PF13007 Transposase C of IS166 homeodomain NKI27_RS05550 PF03050 Transposase IS66 family NKI27_RS05550 PF13817 IS66 C-terminal element NKI27_RS05550 PF13007 Transposase C of IS166 homeodomain NKI27_RS05550 PF13005 zinc-finger binding domain of transposase IS66 NKI27_RS05605 PF02599 Global regulator protein family NKI27_RS05610 PF04231 Endonuclease I NKI27_RS05635 PF17841 BID domain of Bartonella effector protein (Bep) NKI27_RS05635 PF02661 Fic/DOC family NKI27_RS05785 PF12556 Cobaltochelatase CobS subunit N terminal NKI27_RS05785 PF08406 CbbQ/NirQ/NorQ C-terminal NKI27_RS05785 PF07728 AAA domain (dynein-related subfamily) NKI27_RS05830 PF04002 RadC-like JAB domain NKI27_RS05855 PF03050 Transposase IS66 family NKI27_RS05855 PF13817 IS66 C-terminal element NKI27_RS05855 PF13007 Transposase C of IS166 homeodomain NKI27_RS05855 PF13005 zinc-finger binding domain of transposase IS66 NKI27_RS05870 PF04607 Region found in RelA / SpoT proteins NKI27_RS05870 PF13291 ACT domain NKI27_RS05870 PF02824 TGS domain NKI27_RS05935 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like NKI27_RS05950 PF13007 Transposase C of IS166 homeodomain NKI27_RS05950 PF13817 IS66 C-terminal element NKI27_RS05950 PF03050 Transposase IS66 family NKI27_RS05950 PF13005 zinc-finger binding domain of transposase IS66 NKI27_RS06020 PF05016 ParE toxin of type II toxin-antitoxin system, parDE NKI27_RS06070 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NKI27_RS06075 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system NKI27_RS06095 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH NKI27_RS06100 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ NKI27_RS06125 PF00330 Aconitase family (aconitate hydratase) NKI27_RS06125 PF00694 Aconitase C-terminal domain NKI27_RS06130 PF14480 DNA polymerase III polC-type N-terminus I NKI27_RS06130 PF11490 DNA polymerase III polC-type N-terminus II NKI27_RS06130 PF07733 Bacterial DNA polymerase III alpha NTPase domain NKI27_RS06130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NKI27_RS06130 PF14579 Helix-hairpin-helix motif NKI27_RS06130 PF02811 PHP domain NKI27_RS06130 PF00929 Exonuclease NKI27_RS06140 PF01713 Smr domain NKI27_RS06150 PF00596 Class II Aldolase and Adducin N-terminal domain NKI27_RS06155 PF03079 ARD/ARD' family NKI27_RS06160 PF13419 Haloacid dehalogenase-like hydrolase NKI27_RS06175 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NKI27_RS06205 PF00437 Type II/IV secretion system protein NKI27_RS06205 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NKI27_RS06215 PF03358 NADPH-dependent FMN reductase NKI27_RS06220 PF03960 ArsC family NKI27_RS06235 PF03738 Glutathionylspermidine synthase preATP-grasp NKI27_RS06240 PF06693 Protein of unknown function (DUF1190) NKI27_RS06245 PF03994 Domain of Unknown Function (DUF350) NKI27_RS06260 PF04012 PspA/IM30 family NKI27_RS06265 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) NKI27_RS06285 PF01336 OB-fold nucleic acid binding domain NKI27_RS06285 PF02811 PHP domain NKI27_RS06285 PF14579 Helix-hairpin-helix motif NKI27_RS06285 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NKI27_RS06285 PF07733 Bacterial DNA polymerase III alpha NTPase domain NKI27_RS06290 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NKI27_RS06295 PF01171 PP-loop family NKI27_RS06295 PF09179 TilS substrate binding domain NKI27_RS06295 PF11734 TilS substrate C-terminal domain NKI27_RS06300 PF06418 CTP synthase N-terminus NKI27_RS06300 PF00117 Glutamine amidotransferase class-I NKI27_RS06305 PF00793 DAHP synthetase I family NKI27_RS06310 PF03952 Enolase, N-terminal domain NKI27_RS06310 PF00113 Enolase, C-terminal TIM barrel domain NKI27_RS06315 PF04977 Septum formation initiator NKI27_RS06320 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NKI27_RS06325 PF02542 YgbB family NKI27_RS06330 PF01142 tRNA pseudouridine synthase D (TruD) NKI27_RS06335 PF01975 Survival protein SurE NKI27_RS06350 PF01551 Peptidase family M23 NKI27_RS06350 PF01476 LysM domain NKI27_RS06355 PF04545 Sigma-70, region 4 NKI27_RS06355 PF00140 Sigma-70 factor, region 1.2 NKI27_RS06355 PF04542 Sigma-70 region 2 NKI27_RS06355 PF04539 Sigma-70 region 3 NKI27_RS06370 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS06375 PF00005 ABC transporter NKI27_RS06375 PF03459 TOBE domain NKI27_RS06390 PF10576 Iron-sulfur binding domain of endonuclease III NKI27_RS06390 PF00633 Helix-hairpin-helix motif NKI27_RS06390 PF00730 HhH-GPD superfamily base excision DNA repair protein NKI27_RS06395 PF02508 Rnf-Nqr subunit, membrane protein NKI27_RS06400 PF04205 FMN-binding domain NKI27_RS06405 PF03116 NQR2, RnfD, RnfE family NKI27_RS06410 PF13375 RnfC Barrel sandwich hybrid domain NKI27_RS06410 PF10531 SLBB domain NKI27_RS06410 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NKI27_RS06410 PF13237 4Fe-4S dicluster domain NKI27_RS06415 PF04060 Putative Fe-S cluster NKI27_RS06420 PF02508 Rnf-Nqr subunit, membrane protein NKI27_RS06425 PF09334 tRNA synthetases class I (M) NKI27_RS06425 PF01588 Putative tRNA binding domain NKI27_RS06430 PF10609 NUBPL iron-transfer P-loop NTPase NKI27_RS06435 PF00403 Heavy-metal-associated domain NKI27_RS06440 PF00034 Cytochrome c NKI27_RS06450 PF00115 Cytochrome C and Quinol oxidase polypeptide I NKI27_RS06460 PF03649 Uncharacterised protein family (UPF0014) NKI27_RS06465 PF00005 ABC transporter NKI27_RS06470 PF00692 dUTPase NKI27_RS06475 PF07690 Major Facilitator Superfamily NKI27_RS06480 PF00596 Class II Aldolase and Adducin N-terminal domain NKI27_RS06490 PF00155 Aminotransferase class I and II NKI27_RS06495 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS06500 PF01209 ubiE/COQ5 methyltransferase family NKI27_RS06505 PF01263 Aldose 1-epimerase NKI27_RS06510 PF01554 MatE NKI27_RS06515 PF08668 HDOD domain NKI27_RS06515 PF00563 EAL domain NKI27_RS06525 PF17773 UPF0176 acylphosphatase like domain NKI27_RS06525 PF00581 Rhodanese-like domain NKI27_RS06535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS06535 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS06535 PF08448 PAS fold NKI27_RS06535 PF13188 PAS domain NKI27_RS06535 PF00072 Response regulator receiver domain NKI27_RS06540 PF00072 Response regulator receiver domain NKI27_RS06540 PF13188 PAS domain NKI27_RS06540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS06540 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS06540 PF08448 PAS fold NKI27_RS06545 PF02954 Bacterial regulatory protein, Fis family NKI27_RS06545 PF00158 Sigma-54 interaction domain NKI27_RS06545 PF00072 Response regulator receiver domain NKI27_RS06550 PF02954 Bacterial regulatory protein, Fis family NKI27_RS06550 PF00158 Sigma-54 interaction domain NKI27_RS06550 PF00072 Response regulator receiver domain NKI27_RS06555 PF17158 Membrane-associated sensor, integral membrane domain NKI27_RS06555 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS06560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS06560 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS06560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS06565 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS06565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS06565 PF12806 Acetyl-CoA dehydrogenase C-terminal like NKI27_RS06565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS06580 PF00072 Response regulator receiver domain NKI27_RS06610 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS06615 PF12833 Helix-turn-helix domain NKI27_RS06620 PF02515 CoA-transferase family III NKI27_RS06625 PF12852 Cupin NKI27_RS06625 PF12833 Helix-turn-helix domain NKI27_RS06635 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NKI27_RS06635 PF01266 FAD dependent oxidoreductase NKI27_RS06640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NKI27_RS06640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NKI27_RS06645 PF00072 Response regulator receiver domain NKI27_RS06650 PF04461 Protein of unknown function (DUF520) NKI27_RS06660 PF07690 Major Facilitator Superfamily NKI27_RS06665 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NKI27_RS06675 PF04186 FxsA cytoplasmic membrane protein NKI27_RS06680 PF00166 Chaperonin 10 Kd subunit NKI27_RS06685 PF00118 TCP-1/cpn60 chaperonin family NKI27_RS06700 PF00263 Bacterial type II and III secretion system protein NKI27_RS06700 PF03958 Bacterial type II/III secretion system short domain NKI27_RS06705 PF01435 Peptidase family M48 NKI27_RS06710 PF04011 LemA family NKI27_RS06715 PF00563 EAL domain NKI27_RS06715 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS06715 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS06720 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NKI27_RS06720 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NKI27_RS06725 PF02222 ATP-grasp domain NKI27_RS06725 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NKI27_RS06730 PF00731 AIR carboxylase NKI27_RS06805 PF01513 ATP-NAD kinase NKI27_RS06810 PF00149 Calcineurin-like phosphoesterase NKI27_RS06815 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NKI27_RS06815 PF01694 Rhomboid family NKI27_RS06830 PF01433 Peptidase family M1 domain NKI27_RS06830 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NKI27_RS06830 PF11940 Domain of unknown function (DUF3458) Ig-like fold NKI27_RS06835 PF07044 Protein of unknown function (DUF1329) NKI27_RS06850 PF16868 NMT1-like family NKI27_RS06860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NKI27_RS06860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NKI27_RS06860 PF03129 Anticodon binding domain NKI27_RS06860 PF02824 TGS domain NKI27_RS06865 PF05198 Translation initiation factor IF-3, N-terminal domain NKI27_RS06865 PF00707 Translation initiation factor IF-3, C-terminal domain NKI27_RS06870 PF01632 Ribosomal protein L35 NKI27_RS06875 PF00453 Ribosomal protein L20 NKI27_RS06880 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NKI27_RS06880 PF01409 tRNA synthetases class II core domain (F) NKI27_RS06885 PF01588 Putative tRNA binding domain NKI27_RS06885 PF03483 B3/4 domain NKI27_RS06885 PF03484 tRNA synthetase B5 domain NKI27_RS06885 PF03147 Ferredoxin-fold anticodon binding domain NKI27_RS06885 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NKI27_RS06890 PF00216 Bacterial DNA-binding protein NKI27_RS06915 PF13005 zinc-finger binding domain of transposase IS66 NKI27_RS06915 PF13007 Transposase C of IS166 homeodomain NKI27_RS06915 PF03050 Transposase IS66 family NKI27_RS06915 PF13817 IS66 C-terminal element NKI27_RS06970 PF07728 AAA domain (dynein-related subfamily) NKI27_RS06970 PF17863 AAA lid domain NKI27_RS06970 PF13519 von Willebrand factor type A domain NKI27_RS06975 PF12557 Cob(I)alamin adenosyltransferase N terminal NKI27_RS06975 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NKI27_RS06980 PF07685 CobB/CobQ-like glutamine amidotransferase domain NKI27_RS06980 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NKI27_RS06990 PF01888 CbiD NKI27_RS06995 PF02571 Precorrin-6x reductase CbiJ/CobK NKI27_RS07000 PF02570 Precorrin-8X methylmutase NKI27_RS07005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NKI27_RS07010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NKI27_RS07015 PF11760 Cobalamin synthesis G N-terminal NKI27_RS07015 PF01890 Cobalamin synthesis G C-terminus NKI27_RS07015 PF11761 Cobalamin biosynthesis central region NKI27_RS07020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NKI27_RS07020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NKI27_RS07025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NKI27_RS07035 PF01903 CbiX NKI27_RS07040 PF02492 CobW/HypB/UreG, nucleotide-binding domain NKI27_RS07040 PF07683 Cobalamin synthesis protein cobW C-terminal domain NKI27_RS07045 PF02514 CobN/Magnesium Chelatase NKI27_RS07050 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NKI27_RS07050 PF07685 CobB/CobQ-like glutamine amidotransferase domain NKI27_RS07055 PF17113 Regulatory signalling modulator protein AmpE NKI27_RS07055 PF03186 CobD/Cbib protein NKI27_RS07060 PF00155 Aminotransferase class I and II NKI27_RS07065 PF04955 HupE / UreJ protein NKI27_RS07070 PF02567 Phenazine biosynthesis-like protein NKI27_RS07075 PF01817 Chorismate mutase type II NKI27_RS07085 PF02798 Glutathione S-transferase, N-terminal domain NKI27_RS07090 PF13438 Domain of unknown function (DUF4113) NKI27_RS07090 PF00817 impB/mucB/samB family NKI27_RS07090 PF11799 impB/mucB/samB family C-terminal domain NKI27_RS07095 PF00717 Peptidase S24-like NKI27_RS07100 PF00270 DEAD/DEAH box helicase NKI27_RS07100 PF00271 Helicase conserved C-terminal domain NKI27_RS07100 PF00570 HRDC domain NKI27_RS07100 PF16124 RecQ zinc-binding NKI27_RS07100 PF09382 RQC domain NKI27_RS07105 PF02646 RmuC family NKI27_RS07110 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS07110 PF00563 EAL domain NKI27_RS07110 PF08448 PAS fold NKI27_RS07120 PF08406 CbbQ/NirQ/NorQ C-terminal NKI27_RS07120 PF07728 AAA domain (dynein-related subfamily) NKI27_RS07140 PF14824 Sirohaem biosynthesis protein central NKI27_RS07140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NKI27_RS07140 PF10414 Sirohaem synthase dimerisation region NKI27_RS07145 PF04055 Radical SAM superfamily NKI27_RS07145 PF13186 Iron-sulfur cluster-binding domain NKI27_RS07150 PF17805 AsnC-like ligand binding domain NKI27_RS07155 PF17805 AsnC-like ligand binding domain NKI27_RS07155 PF13404 AsnC-type helix-turn-helix domain NKI27_RS07160 PF17805 AsnC-like ligand binding domain NKI27_RS07165 PF17805 AsnC-like ligand binding domain NKI27_RS07175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NKI27_RS07185 PF03264 NapC/NirT cytochrome c family, N-terminal region NKI27_RS07190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NKI27_RS07195 PF00034 Cytochrome c NKI27_RS07200 PF00115 Cytochrome C and Quinol oxidase polypeptide I NKI27_RS07205 PF00092 von Willebrand factor type A domain NKI27_RS07210 PF00510 Cytochrome c oxidase subunit III NKI27_RS07225 PF00753 Metallo-beta-lactamase superfamily NKI27_RS07225 PF12706 Beta-lactamase superfamily domain NKI27_RS07230 PF08668 HDOD domain NKI27_RS07245 PF00155 Aminotransferase class I and II NKI27_RS07255 PF00294 pfkB family carbohydrate kinase NKI27_RS07260 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS07260 PF00989 PAS fold NKI27_RS07260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS07260 PF16736 Single Cache-like NKI27_RS07270 PF00072 Response regulator receiver domain NKI27_RS07270 PF00486 Transcriptional regulatory protein, C terminal NKI27_RS07275 PF01131 DNA topoisomerase NKI27_RS07275 PF01751 Toprim domain NKI27_RS07280 PF01722 BolA-like protein NKI27_RS07285 PF01300 Telomere recombination NKI27_RS07300 PF11799 impB/mucB/samB family C-terminal domain NKI27_RS07300 PF11798 IMS family HHH motif NKI27_RS07300 PF13438 Domain of unknown function (DUF4113) NKI27_RS07300 PF00817 impB/mucB/samB family NKI27_RS07305 PF00717 Peptidase S24-like NKI27_RS07350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NKI27_RS07360 PF05523 WxcM-like, C-terminal NKI27_RS07390 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NKI27_RS07400 PF13193 AMP-binding enzyme C-terminal domain NKI27_RS07400 PF00501 AMP-binding enzyme NKI27_RS07405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NKI27_RS07405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NKI27_RS07410 PF00550 Phosphopantetheine attachment site NKI27_RS07425 PF00669 Bacterial flagellin N-terminal helical region NKI27_RS07425 PF00700 Bacterial flagellin C-terminal helical region NKI27_RS07435 PF00700 Bacterial flagellin C-terminal helical region NKI27_RS07435 PF00669 Bacterial flagellin N-terminal helical region NKI27_RS07445 PF07195 Flagellar hook-associated protein 2 C-terminus NKI27_RS07445 PF02465 Flagellar hook-associated protein 2 N-terminus NKI27_RS07455 PF00850 Histone deacetylase domain NKI27_RS07460 PF00583 Acetyltransferase (GNAT) family NKI27_RS07460 PF13380 CoA binding domain NKI27_RS07460 PF13607 Succinyl-CoA ligase like flavodoxin domain NKI27_RS07465 PF04381 Putative exonuclease, RdgC NKI27_RS07475 PF03883 Peroxide stress protein YaaA NKI27_RS07500 PF00092 von Willebrand factor type A domain NKI27_RS07500 PF07584 Aerotolerance regulator N-terminal NKI27_RS07515 PF01882 Protein of unknown function DUF58 NKI27_RS07520 PF07726 ATPase family associated with various cellular activities (AAA) NKI27_RS07520 PF17863 AAA lid domain NKI27_RS07525 PF05088 Bacterial NAD-glutamate dehydrogenase NKI27_RS07540 PF04073 Aminoacyl-tRNA editing domain NKI27_RS07540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NKI27_RS07540 PF03129 Anticodon binding domain NKI27_RS07545 PF02601 Exonuclease VII, large subunit NKI27_RS07545 PF13742 OB-fold nucleic acid binding domain NKI27_RS07550 PF00571 CBS domain NKI27_RS07550 PF00478 IMP dehydrogenase / GMP reductase domain NKI27_RS07555 PF00117 Glutamine amidotransferase class-I NKI27_RS07555 PF00958 GMP synthase C terminal domain NKI27_RS07555 PF02540 NAD synthase NKI27_RS07560 PF14437 MafB19-like deaminase NKI27_RS07565 PF01370 NAD dependent epimerase/dehydratase family NKI27_RS07570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NKI27_RS07570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NKI27_RS07570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NKI27_RS07580 PF00440 Bacterial regulatory proteins, tetR family NKI27_RS07585 PF00072 Response regulator receiver domain NKI27_RS07585 PF01966 HD domain NKI27_RS07595 PF02938 GAD domain NKI27_RS07595 PF00152 tRNA synthetases class II (D, K and N) NKI27_RS07595 PF01336 OB-fold nucleic acid binding domain NKI27_RS07600 PF02075 Crossover junction endodeoxyribonuclease RuvC NKI27_RS07605 PF07499 RuvA, C-terminal domain NKI27_RS07605 PF01330 RuvA N terminal domain NKI27_RS07610 PF05496 Holliday junction DNA helicase RuvB P-loop domain NKI27_RS07610 PF17864 RuvB AAA lid domain NKI27_RS07610 PF05491 RuvB C-terminal winged helix domain NKI27_RS07615 PF03061 Thioesterase superfamily NKI27_RS07620 PF01618 MotA/TolQ/ExbB proton channel family NKI27_RS07625 PF02472 Biopolymer transport protein ExbD/TolR NKI27_RS07635 PF07676 WD40-like Beta Propeller Repeat NKI27_RS07635 PF04052 TolB amino-terminal domain NKI27_RS07640 PF00691 OmpA family NKI27_RS07645 PF13525 Outer membrane lipoprotein NKI27_RS07645 PF16331 TolA binding protein trimerisation NKI27_RS07660 PF02445 Quinolinate synthetase A protein NKI27_RS07665 PF01435 Peptidase family M48 NKI27_RS07670 PF01206 Sulfurtransferase TusA NKI27_RS07675 PF01594 AI-2E family transporter NKI27_RS07685 PF00578 AhpC/TSA family NKI27_RS07690 PF01842 ACT domain NKI27_RS07695 PF00701 Dihydrodipicolinate synthetase family NKI27_RS07705 PF01259 SAICAR synthetase NKI27_RS07715 PF01370 NAD dependent epimerase/dehydratase family NKI27_RS07765 PF08463 EcoEI R protein C-terminal NKI27_RS07765 PF00271 Helicase conserved C-terminal domain NKI27_RS07765 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) NKI27_RS07765 PF04851 Type III restriction enzyme, res subunit NKI27_RS07795 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NKI27_RS07795 PF18766 SWI2/SNF2 ATPase NKI27_RS07795 PF11867 Domain of unknown function (DUF3387) NKI27_RS07805 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system NKI27_RS07815 PF12161 HsdM N-terminal domain NKI27_RS07815 PF02384 N-6 DNA Methylase NKI27_RS07860 PF01541 GIY-YIG catalytic domain NKI27_RS07870 PF01420 Type I restriction modification DNA specificity domain NKI27_RS07875 PF02463 RecF/RecN/SMC N terminal domain NKI27_RS07895 PF06250 YhcG PDDEXK nuclease domain NKI27_RS07895 PF17761 DUF1016 N-terminal domain NKI27_RS07945 PF00483 Nucleotidyl transferase NKI27_RS07955 PF00317 Ribonucleotide reductase, all-alpha domain NKI27_RS07955 PF02867 Ribonucleotide reductase, barrel domain NKI27_RS07955 PF03477 ATP cone domain NKI27_RS07975 PF00873 AcrB/AcrD/AcrF family NKI27_RS08005 PF00005 ABC transporter NKI27_RS08010 PF02653 Branched-chain amino acid transport system / permease component NKI27_RS08030 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS08060 PF00005 ABC transporter NKI27_RS08065 PF01061 ABC-2 type transporter NKI27_RS08070 PF14489 QueF-like protein NKI27_RS08070 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NKI27_RS08075 PF00211 Adenylate and Guanylate cyclase catalytic domain NKI27_RS08080 PF00881 Nitroreductase family NKI27_RS08090 PF00460 Flagella basal body rod protein NKI27_RS08095 PF00460 Flagella basal body rod protein NKI27_RS08095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NKI27_RS08100 PF03963 Flagellar hook capping protein - N-terminal region NKI27_RS08105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NKI27_RS08105 PF07559 Flagellar basal body protein FlaE NKI27_RS08105 PF00460 Flagella basal body rod protein NKI27_RS08110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NKI27_RS08110 PF00460 Flagella basal body rod protein NKI27_RS08115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NKI27_RS08115 PF00460 Flagella basal body rod protein NKI27_RS08120 PF02107 Flagellar L-ring protein NKI27_RS08125 PF02119 Flagellar P-ring protein NKI27_RS08130 PF10135 Rod binding protein NKI27_RS08130 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NKI27_RS08135 PF00460 Flagella basal body rod protein NKI27_RS08135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NKI27_RS08140 PF00700 Bacterial flagellin C-terminal helical region NKI27_RS08140 PF00669 Bacterial flagellin N-terminal helical region NKI27_RS08150 PF02678 Pirin NKI27_RS08150 PF17954 Quercetinase C-terminal cupin domain NKI27_RS08160 PF02678 Pirin NKI27_RS08160 PF05726 Pirin C-terminal cupin domain NKI27_RS08165 PF02678 Pirin NKI27_RS08165 PF05726 Pirin C-terminal cupin domain NKI27_RS08170 PF02525 Flavodoxin-like fold NKI27_RS08180 PF07992 Pyridine nucleotide-disulphide oxidoreductase NKI27_RS08180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NKI27_RS08190 PF00578 AhpC/TSA family NKI27_RS08195 PF02547 Queuosine biosynthesis protein NKI27_RS08200 PF01702 Queuine tRNA-ribosyltransferase NKI27_RS08205 PF02699 Preprotein translocase subunit NKI27_RS08210 PF07549 SecD/SecF GG Motif NKI27_RS08210 PF13721 SecD export protein N-terminal TM region NKI27_RS08210 PF02355 Protein export membrane protein NKI27_RS08215 PF07549 SecD/SecF GG Motif NKI27_RS08215 PF02355 Protein export membrane protein NKI27_RS08220 PF00459 Inositol monophosphatase family NKI27_RS08225 PF00588 SpoU rRNA Methylase family NKI27_RS08230 PF00132 Bacterial transferase hexapeptide (six repeats) NKI27_RS08235 PF02082 Transcriptional regulator NKI27_RS08240 PF00266 Aminotransferase class-V NKI27_RS08245 PF00334 Nucleoside diphosphate kinase NKI27_RS08250 PF04055 Radical SAM superfamily NKI27_RS08260 PF13464 Domain of unknown function (DUF4115) NKI27_RS08265 PF04551 GcpE protein NKI27_RS08270 PF13393 Histidyl-tRNA synthetase NKI27_RS08270 PF03129 Anticodon binding domain NKI27_RS08275 PF09976 Tetratricopeptide repeat-like domain NKI27_RS08280 PF13360 PQQ-like domain NKI27_RS08290 PF07085 DRTGG domain NKI27_RS08290 PF01515 Phosphate acetyl/butaryl transferase NKI27_RS08295 PF00871 Acetokinase family NKI27_RS08300 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS08300 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS08300 PF00563 EAL domain NKI27_RS08310 PF08668 HDOD domain NKI27_RS08310 PF00563 EAL domain NKI27_RS08340 PF01584 CheW-like domain NKI27_RS08340 PF00072 Response regulator receiver domain NKI27_RS08345 PF00111 2Fe-2S iron-sulfur cluster binding domain NKI27_RS08345 PF03473 MOSC domain NKI27_RS08345 PF03476 MOSC N-terminal beta barrel domain NKI27_RS08355 PF12848 ABC transporter NKI27_RS08355 PF16326 ABC transporter C-terminal domain NKI27_RS08355 PF00005 ABC transporter NKI27_RS08365 PF00582 Universal stress protein family NKI27_RS08380 PF00378 Enoyl-CoA hydratase/isomerase NKI27_RS08380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NKI27_RS08380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NKI27_RS08385 PF02803 Thiolase, C-terminal domain NKI27_RS08385 PF00108 Thiolase, N-terminal domain NKI27_RS08395 PF01751 Toprim domain NKI27_RS08395 PF01131 DNA topoisomerase NKI27_RS08395 PF08272 Topoisomerase I zinc-ribbon-like NKI27_RS08395 PF01396 Topoisomerase DNA binding C4 zinc finger NKI27_RS08400 PF00285 Citrate synthase, C-terminal domain NKI27_RS08405 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NKI27_RS08410 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NKI27_RS08415 PF00890 FAD binding domain NKI27_RS08415 PF02910 Fumarate reductase flavoprotein C-term NKI27_RS08420 PF13085 2Fe-2S iron-sulfur cluster binding domain NKI27_RS08425 PF16870 2-oxoglutarate dehydrogenase C-terminal NKI27_RS08425 PF16078 2-oxoglutarate dehydrogenase N-terminus NKI27_RS08425 PF02779 Transketolase, pyrimidine binding domain NKI27_RS08425 PF00676 Dehydrogenase E1 component NKI27_RS08430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NKI27_RS08430 PF00364 Biotin-requiring enzyme NKI27_RS08430 PF02817 e3 binding domain NKI27_RS08435 PF07992 Pyridine nucleotide-disulphide oxidoreductase NKI27_RS08435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NKI27_RS08440 PF08442 ATP-grasp domain NKI27_RS08440 PF00549 CoA-ligase NKI27_RS08445 PF00549 CoA-ligase NKI27_RS08445 PF02629 CoA binding domain NKI27_RS08450 PF00579 tRNA synthetases class I (W and Y) NKI27_RS08455 PF02616 Segregation and condensation protein ScpA NKI27_RS08460 PF04079 Segregation and condensation complex subunit ScpB NKI27_RS08465 PF00849 RNA pseudouridylate synthase NKI27_RS08465 PF01479 S4 domain NKI27_RS08470 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS08480 PF02463 RecF/RecN/SMC N terminal domain NKI27_RS08480 PF06470 SMC proteins Flexible Hinge Domain NKI27_RS08485 PF04354 ZipA, C-terminal FtsZ-binding domain NKI27_RS08490 PF00533 BRCA1 C Terminus (BRCT) domain NKI27_RS08490 PF01653 NAD-dependent DNA ligase adenylation domain NKI27_RS08490 PF03120 NAD-dependent DNA ligase OB-fold domain NKI27_RS08490 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NKI27_RS08490 PF12826 Helix-hairpin-helix motif NKI27_RS08495 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NKI27_RS08495 PF01266 FAD dependent oxidoreductase NKI27_RS08500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NKI27_RS08505 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS08505 PF17158 Membrane-associated sensor, integral membrane domain NKI27_RS08530 PF00072 Response regulator receiver domain NKI27_RS08530 PF01584 CheW-like domain NKI27_RS08535 PF01739 CheR methyltransferase, SAM binding domain NKI27_RS08535 PF03705 CheR methyltransferase, all-alpha domain NKI27_RS08545 PF04542 Sigma-70 region 2 NKI27_RS08545 PF04545 Sigma-70, region 4 NKI27_RS08550 PF00875 DNA photolyase NKI27_RS08550 PF03441 FAD binding domain of DNA photolyase NKI27_RS08595 PF12848 ABC transporter NKI27_RS08595 PF00005 ABC transporter NKI27_RS08605 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS08605 PF12806 Acetyl-CoA dehydrogenase C-terminal like NKI27_RS08605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS08605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS08615 PF07995 Glucose / Sorbosone dehydrogenase NKI27_RS08625 PF08859 DGC domain NKI27_RS08635 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NKI27_RS08655 PF02082 Transcriptional regulator NKI27_RS08660 PF00042 Globin NKI27_RS08660 PF00970 Oxidoreductase FAD-binding domain NKI27_RS08660 PF00175 Oxidoreductase NAD-binding domain NKI27_RS08665 PF00072 Response regulator receiver domain NKI27_RS08665 PF00158 Sigma-54 interaction domain NKI27_RS08665 PF02954 Bacterial regulatory protein, Fis family NKI27_RS08670 PF00989 PAS fold NKI27_RS08670 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS08670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS08675 PF01654 Cytochrome bd terminal oxidase subunit I NKI27_RS08680 PF02322 Cytochrome bd terminal oxidase subunit II NKI27_RS08685 PF00248 Aldo/keto reductase family NKI27_RS08690 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NKI27_RS08690 PF12170 DNA polymerase III tau subunit V interacting with alpha NKI27_RS08690 PF12169 DNA polymerase III subunits gamma and tau domain III NKI27_RS08690 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NKI27_RS08690 PF12170 DNA polymerase III tau subunit V interacting with alpha NKI27_RS08690 PF12169 DNA polymerase III subunits gamma and tau domain III NKI27_RS08695 PF02575 YbaB/EbfC DNA-binding family NKI27_RS08700 PF02132 RecR protein NKI27_RS08700 PF13662 Toprim domain NKI27_RS08705 PF00570 HRDC domain NKI27_RS08705 PF01612 3'-5' exonuclease NKI27_RS08710 PF05166 YcgL domain NKI27_RS08715 PF03692 Putative zinc- or iron-chelating domain NKI27_RS08735 PF13230 Glutamine amidotransferases class-II NKI27_RS08740 PF00291 Pyridoxal-phosphate dependent enzyme NKI27_RS08745 PF00004 ATPase family associated with various cellular activities (AAA) NKI27_RS08745 PF07724 AAA domain (Cdc48 subfamily) NKI27_RS08745 PF17871 AAA lid domain NKI27_RS08745 PF02861 Clp amino terminal domain, pathogenicity island component NKI27_RS08745 PF10431 C-terminal, D2-small domain, of ClpB protein NKI27_RS08780 PF01618 MotA/TolQ/ExbB proton channel family NKI27_RS08800 PF01575 MaoC like domain NKI27_RS08805 PF12146 Serine aminopeptidase, S33 NKI27_RS08810 PF13193 AMP-binding enzyme C-terminal domain NKI27_RS08810 PF00501 AMP-binding enzyme NKI27_RS08815 PF00271 Helicase conserved C-terminal domain NKI27_RS08815 PF00270 DEAD/DEAH box helicase NKI27_RS08815 PF11898 Domain of unknown function (DUF3418) NKI27_RS08815 PF04408 Helicase associated domain (HA2) NKI27_RS08815 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NKI27_RS08820 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NKI27_RS08820 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NKI27_RS08835 PF01471 Putative peptidoglycan binding domain NKI27_RS08835 PF13401 AAA domain NKI27_RS08845 PF13307 Helicase C-terminal domain NKI27_RS08845 PF06733 DEAD_2 NKI27_RS08850 PF00196 Bacterial regulatory proteins, luxR family NKI27_RS08850 PF17874 MalT-like TPR region NKI27_RS08855 PF01925 Sulfite exporter TauE/SafE NKI27_RS08860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS08860 PF03466 LysR substrate binding domain NKI27_RS08865 PF01507 Phosphoadenosine phosphosulfate reductase family NKI27_RS08875 PF04715 Anthranilate synthase component I, N terminal region NKI27_RS08875 PF00425 chorismate binding enzyme NKI27_RS08920 PF11992 Domain of unknown function (DUF3488) NKI27_RS08920 PF13559 Domain of unknown function (DUF4129) NKI27_RS08920 PF01841 Transglutaminase-like superfamily NKI27_RS08925 PF09115 DNA polymerase III, delta subunit, C terminal NKI27_RS08935 PF01026 TatD related DNase NKI27_RS08940 PF08386 TAP-like protein NKI27_RS08940 PF00561 alpha/beta hydrolase fold NKI27_RS08950 PF01734 Patatin-like phospholipase NKI27_RS08955 PF05175 Methyltransferase small domain NKI27_RS08960 PF01264 Chorismate synthase NKI27_RS08965 PF12832 MFS_1 like family NKI27_RS08975 PF00561 alpha/beta hydrolase fold NKI27_RS08975 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NKI27_RS08980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS08980 PF03466 LysR substrate binding domain NKI27_RS08985 PF00330 Aconitase family (aconitate hydratase) NKI27_RS08990 PF00694 Aconitase C-terminal domain NKI27_RS08995 PF00180 Isocitrate/isopropylmalate dehydrogenase NKI27_RS09000 PF01118 Semialdehyde dehydrogenase, NAD binding domain NKI27_RS09000 PF02774 Semialdehyde dehydrogenase, dimerisation domain NKI27_RS09010 PF01416 tRNA pseudouridine synthase NKI27_RS09015 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NKI27_RS09020 PF00291 Pyridoxal-phosphate dependent enzyme NKI27_RS09025 PF00290 Tryptophan synthase alpha chain NKI27_RS09030 PF17848 Acetyl-coA carboxylase zinc finger domain NKI27_RS09030 PF01039 Carboxyl transferase domain NKI27_RS09035 PF08245 Mur ligase middle domain NKI27_RS09035 PF02875 Mur ligase family, glutamate ligase domain NKI27_RS09045 PF02674 Colicin V production protein NKI27_RS09050 PF00156 Phosphoribosyl transferase domain NKI27_RS09055 PF01053 Cys/Met metabolism PLP-dependent enzyme NKI27_RS09060 PF17854 FtsK alpha domain NKI27_RS09060 PF09397 Ftsk gamma domain NKI27_RS09060 PF01580 FtsK/SpoIIIE family NKI27_RS09060 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NKI27_RS09065 PF03548 Outer membrane lipoprotein carrier protein LolA NKI27_RS09070 PF00004 ATPase family associated with various cellular activities (AAA) NKI27_RS09070 PF16193 AAA C-terminal domain NKI27_RS09070 PF12002 MgsA AAA+ ATPase C terminal NKI27_RS09075 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NKI27_RS09080 PF02403 Seryl-tRNA synthetase N-terminal domain NKI27_RS09080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NKI27_RS09085 PF10414 Sirohaem synthase dimerisation region NKI27_RS09085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NKI27_RS09090 PF00793 DAHP synthetase I family NKI27_RS09110 PF12697 Alpha/beta hydrolase family NKI27_RS09120 PF00005 ABC transporter NKI27_RS09120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NKI27_RS09125 PF12911 N-terminal TM domain of oligopeptide transport permease C NKI27_RS09125 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS09130 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS09135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NKI27_RS09140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NKI27_RS09150 PF01476 LysM domain NKI27_RS09150 PF01464 Transglycosylase SLT domain NKI27_RS09155 PF00753 Metallo-beta-lactamase superfamily NKI27_RS09155 PF16123 Hydroxyacylglutathione hydrolase C-terminus NKI27_RS09165 PF00929 Exonuclease NKI27_RS09180 PF01343 Peptidase family S49 NKI27_RS09180 PF08496 Peptidase family S49 N-terminal NKI27_RS09195 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NKI27_RS09195 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NKI27_RS09200 PF02574 Homocysteine S-methyltransferase NKI27_RS09200 PF02965 Vitamin B12 dependent methionine synthase, activation domain NKI27_RS09200 PF02607 B12 binding domain NKI27_RS09200 PF02310 B12 binding domain NKI27_RS09200 PF00809 Pterin binding enzyme NKI27_RS09205 PF01521 Iron-sulphur cluster biosynthesis NKI27_RS09205 PF01106 NifU-like domain NKI27_RS09220 PF02885 Glycosyl transferase family, helical bundle domain NKI27_RS09220 PF00591 Glycosyl transferase family, a/b domain NKI27_RS09225 PF04358 DsrC like protein NKI27_RS09230 PF04077 DsrH like protein NKI27_RS09235 PF02635 DsrE/DsrF-like family NKI27_RS09240 PF02635 DsrE/DsrF-like family NKI27_RS09245 PF01027 Inhibitor of apoptosis-promoting Bax1 NKI27_RS09260 PF00196 Bacterial regulatory proteins, luxR family NKI27_RS09260 PF00072 Response regulator receiver domain NKI27_RS09265 PF01541 GIY-YIG catalytic domain NKI27_RS09265 PF02151 UvrB/uvrC motif NKI27_RS09265 PF08459 UvrC Helix-hairpin-helix N-terminal NKI27_RS09270 PF01066 CDP-alcohol phosphatidyltransferase NKI27_RS09295 PF00589 Phage integrase family NKI27_RS09295 PF13356 Arm DNA-binding domain NKI27_RS09305 PF00589 Phage integrase family NKI27_RS09305 PF13356 Arm DNA-binding domain NKI27_RS09315 PF13356 Arm DNA-binding domain NKI27_RS09315 PF00589 Phage integrase family NKI27_RS09335 PF01695 IstB-like ATP binding protein NKI27_RS09340 PF00665 Integrase core domain NKI27_RS09365 PF00589 Phage integrase family NKI27_RS09365 PF13356 Arm DNA-binding domain NKI27_RS09385 PF01863 Protein of unknown function DUF45 NKI27_RS09395 PF00465 Iron-containing alcohol dehydrogenase NKI27_RS09400 PF00672 HAMP domain NKI27_RS09400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS09400 PF01627 Hpt domain NKI27_RS09400 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS09400 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NKI27_RS09400 PF00072 Response regulator receiver domain NKI27_RS09415 PF01274 Malate synthase NKI27_RS09425 PF08007 Cupin superfamily protein NKI27_RS09430 PF00206 Lyase NKI27_RS09430 PF08328 Adenylosuccinate lyase C-terminal NKI27_RS09435 PF04356 Protein of unknown function (DUF489) NKI27_RS09445 PF00293 NUDIX domain NKI27_RS09450 PF00849 RNA pseudouridylate synthase NKI27_RS09455 PF00313 'Cold-shock' DNA-binding domain NKI27_RS09460 PF02617 ATP-dependent Clp protease adaptor protein ClpS NKI27_RS09465 PF10431 C-terminal, D2-small domain, of ClpB protein NKI27_RS09465 PF17871 AAA lid domain NKI27_RS09465 PF00004 ATPase family associated with various cellular activities (AAA) NKI27_RS09465 PF02861 Clp amino terminal domain, pathogenicity island component NKI27_RS09465 PF07724 AAA domain (Cdc48 subfamily) NKI27_RS09470 PF01176 Translation initiation factor 1A / IF-1 NKI27_RS09475 PF04377 Arginine-tRNA-protein transferase, C terminus NKI27_RS09475 PF04376 Arginine-tRNA-protein transferase, N terminus NKI27_RS09480 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NKI27_RS09485 PF07992 Pyridine nucleotide-disulphide oxidoreductase NKI27_RS09490 PF07726 ATPase family associated with various cellular activities (AAA) NKI27_RS09490 PF17863 AAA lid domain NKI27_RS09495 PF00795 Carbon-nitrogen hydrolase NKI27_RS09500 PF04371 Porphyromonas-type peptidyl-arginine deiminase NKI27_RS09515 PF02687 FtsX-like permease family NKI27_RS09515 PF12704 MacB-like periplasmic core domain NKI27_RS09520 PF00005 ABC transporter NKI27_RS09530 PF00753 Metallo-beta-lactamase superfamily NKI27_RS09530 PF13567 Domain of unknown function (DUF4131) NKI27_RS09530 PF03772 Competence protein NKI27_RS09535 PF01618 MotA/TolQ/ExbB proton channel family NKI27_RS09540 PF02472 Biopolymer transport protein ExbD/TolR NKI27_RS09545 PF00664 ABC transporter transmembrane region NKI27_RS09545 PF00005 ABC transporter NKI27_RS09550 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NKI27_RS09555 PF03966 Trm112p-like protein NKI27_RS09560 PF02348 Cytidylyltransferase NKI27_RS09565 PF01451 Low molecular weight phosphotyrosine protein phosphatase NKI27_RS09570 PF01565 FAD binding domain NKI27_RS09570 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NKI27_RS09580 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NKI27_RS09580 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NKI27_RS09580 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NKI27_RS09585 PF02397 Bacterial sugar transferase NKI27_RS09600 PF13614 AAA domain NKI27_RS09610 PF01522 Polysaccharide deacetylase NKI27_RS09620 PF00534 Glycosyl transferases group 1 NKI27_RS09620 PF13439 Glycosyltransferase Family 4 NKI27_RS09630 PF00535 Glycosyl transferase family 2 NKI27_RS09635 PF14883 Hypothetical glycosyl hydrolase family 13 NKI27_RS09635 PF01522 Polysaccharide deacetylase NKI27_RS09640 PF00534 Glycosyl transferases group 1 NKI27_RS09640 PF13439 Glycosyltransferase Family 4 NKI27_RS09665 PF00132 Bacterial transferase hexapeptide (six repeats) NKI27_RS09680 PF00535 Glycosyl transferase family 2 NKI27_RS09690 PF00535 Glycosyl transferase family 2 NKI27_RS09700 PF02709 N-terminal domain of galactosyltransferase NKI27_RS09700 PF00535 Glycosyl transferase family 2 NKI27_RS09735 PF02954 Bacterial regulatory protein, Fis family NKI27_RS09735 PF00072 Response regulator receiver domain NKI27_RS09735 PF00158 Sigma-54 interaction domain NKI27_RS09740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS09740 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS09745 PF01370 NAD dependent epimerase/dehydratase family NKI27_RS09750 PF01553 Acyltransferase NKI27_RS09755 PF00589 Phage integrase family NKI27_RS09755 PF13356 Arm DNA-binding domain NKI27_RS09765 PF08681 Protein of unknown function (DUF1778) NKI27_RS09835 PF03050 Transposase IS66 family NKI27_RS09835 PF13007 Transposase C of IS166 homeodomain NKI27_RS09835 PF13817 IS66 C-terminal element NKI27_RS09835 PF13005 zinc-finger binding domain of transposase IS66 NKI27_RS09855 PF02796 Helix-turn-helix domain of resolvase NKI27_RS09855 PF00239 Resolvase, N terminal domain NKI27_RS09865 PF01483 Proprotein convertase P-domain NKI27_RS09865 PF00082 Subtilase family NKI27_RS09910 PF00665 Integrase core domain NKI27_RS09915 PF01695 IstB-like ATP binding protein NKI27_RS09985 PF13817 IS66 C-terminal element NKI27_RS09985 PF13007 Transposase C of IS166 homeodomain NKI27_RS09985 PF13005 zinc-finger binding domain of transposase IS66 NKI27_RS09985 PF03050 Transposase IS66 family NKI27_RS09990 PF00091 Tubulin/FtsZ family, GTPase domain NKI27_RS09990 PF12327 FtsZ family, C-terminal domain NKI27_RS10085 PF07728 AAA domain (dynein-related subfamily) NKI27_RS10085 PF12102 Domain of unknown function (DUF3578) NKI27_RS10140 PF08361 MAATS-type transcriptional repressor, C-terminal region NKI27_RS10140 PF00440 Bacterial regulatory proteins, tetR family NKI27_RS10145 PF03372 Endonuclease/Exonuclease/phosphatase family NKI27_RS10155 PF00072 Response regulator receiver domain NKI27_RS10165 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NKI27_RS10165 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NKI27_RS10180 PF00266 Aminotransferase class-V NKI27_RS10200 PF01012 Electron transfer flavoprotein domain NKI27_RS10205 PF01012 Electron transfer flavoprotein domain NKI27_RS10205 PF00766 Electron transfer flavoprotein FAD-binding domain NKI27_RS10210 PF00501 AMP-binding enzyme NKI27_RS10210 PF13193 AMP-binding enzyme C-terminal domain NKI27_RS10215 PF00682 HMGL-like NKI27_RS10220 PF18140 Propionyl-coenzyme A carboxylase BT domain NKI27_RS10220 PF00364 Biotin-requiring enzyme NKI27_RS10220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NKI27_RS10220 PF00289 Biotin carboxylase, N-terminal domain NKI27_RS10220 PF02785 Biotin carboxylase C-terminal domain NKI27_RS10225 PF00378 Enoyl-CoA hydratase/isomerase NKI27_RS10230 PF01039 Carboxyl transferase domain NKI27_RS10235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS10235 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS10235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS10255 PF00437 Type II/IV secretion system protein NKI27_RS10260 PF00482 Type II secretion system (T2SS), protein F NKI27_RS10265 PF07963 Prokaryotic N-terminal methylation motif NKI27_RS10265 PF08334 Type II secretion system (T2SS), protein G NKI27_RS10270 PF12019 Type II transport protein GspH NKI27_RS10270 PF07963 Prokaryotic N-terminal methylation motif NKI27_RS10275 PF02501 Type II secretion system (T2SS), protein I NKI27_RS10275 PF07963 Prokaryotic N-terminal methylation motif NKI27_RS10280 PF07963 Prokaryotic N-terminal methylation motif NKI27_RS10280 PF11612 Type II secretion system (T2SS), protein J NKI27_RS10285 PF03934 Type II secretion system (T2SS), protein K NKI27_RS10290 PF12693 GspL periplasmic domain NKI27_RS10290 PF05134 Type II secretion system (T2SS), protein L NKI27_RS10305 PF07992 Pyridine nucleotide-disulphide oxidoreductase NKI27_RS10305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NKI27_RS10310 PF01471 Putative peptidoglycan binding domain NKI27_RS10310 PF13401 AAA domain NKI27_RS10395 PF13476 AAA domain NKI27_RS10400 PF03280 Proteobacterial lipase chaperone protein NKI27_RS10405 PF00561 alpha/beta hydrolase fold NKI27_RS10430 PF13396 Phospholipase_D-nuclease N-terminal NKI27_RS10430 PF13091 PLD-like domain NKI27_RS10435 PF12697 Alpha/beta hydrolase family NKI27_RS10450 PF13194 Domain of unknown function (DUF4010) NKI27_RS10455 PF02627 Carboxymuconolactone decarboxylase family NKI27_RS10465 PF02254 TrkA-N domain NKI27_RS10465 PF00999 Sodium/hydrogen exchanger family NKI27_RS10470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NKI27_RS10470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NKI27_RS10480 PF02885 Glycosyl transferase family, helical bundle domain NKI27_RS10480 PF00591 Glycosyl transferase family, a/b domain NKI27_RS10480 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NKI27_RS10485 PF10996 Beta-Casp domain NKI27_RS10485 PF00753 Metallo-beta-lactamase superfamily NKI27_RS10485 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NKI27_RS10490 PF09364 XFP N-terminal domain NKI27_RS10490 PF09363 XFP C-terminal domain NKI27_RS10490 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase NKI27_RS10520 PF00403 Heavy-metal-associated domain NKI27_RS10525 PF13411 MerR HTH family regulatory protein NKI27_RS10540 PF00873 AcrB/AcrD/AcrF family NKI27_RS10550 PF00529 HlyD membrane-fusion protein of T1SS NKI27_RS10550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NKI27_RS10570 PF00085 Thioredoxin NKI27_RS10570 PF02683 Cytochrome C biogenesis protein transmembrane region NKI27_RS10570 PF11412 Disulphide bond corrector protein DsbC NKI27_RS10580 PF01252 Signal peptidase (SPase) II NKI27_RS10585 PF01545 Cation efflux family NKI27_RS10590 PF13411 MerR HTH family regulatory protein NKI27_RS10615 PF00924 Mechanosensitive ion channel NKI27_RS10625 PF01584 CheW-like domain NKI27_RS10625 PF00072 Response regulator receiver domain NKI27_RS10635 PF01926 50S ribosome-binding GTPase NKI27_RS10635 PF13167 GTP-binding GTPase N-terminal NKI27_RS10635 PF16360 GTP-binding GTPase Middle Region NKI27_RS10650 PF00999 Sodium/hydrogen exchanger family NKI27_RS10650 PF02080 TrkA-C domain NKI27_RS10650 PF02254 TrkA-N domain NKI27_RS10655 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NKI27_RS10675 PF00756 Putative esterase NKI27_RS10680 PF08240 Alcohol dehydrogenase GroES-like domain NKI27_RS10680 PF00107 Zinc-binding dehydrogenase NKI27_RS10685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS10685 PF03466 LysR substrate binding domain NKI27_RS10690 PF02899 Phage integrase, N-terminal SAM-like domain NKI27_RS10690 PF00589 Phage integrase family NKI27_RS10695 PF01769 Divalent cation transporter NKI27_RS10695 PF03448 MgtE intracellular N domain NKI27_RS10695 PF00571 CBS domain NKI27_RS10710 PF08668 HDOD domain NKI27_RS10710 PF00563 EAL domain NKI27_RS10715 PF01081 KDPG and KHG aldolase NKI27_RS10720 PF00920 Dehydratase family NKI27_RS10725 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NKI27_RS10730 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NKI27_RS10730 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NKI27_RS10735 PF03793 PASTA domain NKI27_RS10735 PF00069 Protein kinase domain NKI27_RS10740 PF01226 Formate/nitrite transporter NKI27_RS10745 PF02560 Cyanate lyase C-terminal domain NKI27_RS10750 PF01070 FMN-dependent dehydrogenase NKI27_RS10755 PF13640 2OG-Fe(II) oxygenase superfamily NKI27_RS10755 PF18331 PKHD-type hydroxylase C-terminal domain NKI27_RS10760 PF07715 TonB-dependent Receptor Plug Domain NKI27_RS10760 PF00593 TonB dependent receptor NKI27_RS10775 PF02472 Biopolymer transport protein ExbD/TolR NKI27_RS10780 PF01618 MotA/TolQ/ExbB proton channel family NKI27_RS10790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NKI27_RS10790 PF07992 Pyridine nucleotide-disulphide oxidoreductase NKI27_RS10795 PF00501 AMP-binding enzyme NKI27_RS10795 PF16177 Acetyl-coenzyme A synthetase N-terminus NKI27_RS10795 PF13193 AMP-binding enzyme C-terminal domain NKI27_RS10800 PF00075 RNase H NKI27_RS10815 PF01131 DNA topoisomerase NKI27_RS10815 PF01751 Toprim domain NKI27_RS10830 PF02311 AraC-like ligand binding domain NKI27_RS10830 PF12833 Helix-turn-helix domain NKI27_RS10835 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS10835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS10835 PF12806 Acetyl-CoA dehydrogenase C-terminal like NKI27_RS10835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS10840 PF12697 Alpha/beta hydrolase family NKI27_RS10845 PF00384 Molybdopterin oxidoreductase NKI27_RS10845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NKI27_RS10845 PF01568 Molydopterin dinucleotide binding domain NKI27_RS10910 PF01145 SPFH domain / Band 7 family NKI27_RS10950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS10950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS10950 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS10970 PF08497 Radical SAM N-terminal NKI27_RS10970 PF04055 Radical SAM superfamily NKI27_RS10970 PF11842 Domain of unknown function (DUF3362) NKI27_RS10990 PF00563 EAL domain NKI27_RS10990 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS10990 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS11005 PF02630 SCO1/SenC NKI27_RS11020 PF00486 Transcriptional regulatory protein, C terminal NKI27_RS11020 PF00072 Response regulator receiver domain NKI27_RS11035 PF13538 UvrD-like helicase C-terminal domain NKI27_RS11040 PF12705 PD-(D/E)XK nuclease superfamily NKI27_RS11040 PF00580 UvrD/REP helicase N-terminal domain NKI27_RS11040 PF13361 UvrD-like helicase C-terminal domain NKI27_RS11045 PF17946 RecC C-terminal domain NKI27_RS11060 PF00849 RNA pseudouridylate synthase NKI27_RS11075 PF07237 Protein of unknown function (DUF1428) NKI27_RS11085 PF13085 2Fe-2S iron-sulfur cluster binding domain NKI27_RS11090 PF01047 MarR family NKI27_RS11095 PF00255 Glutathione peroxidase NKI27_RS11120 PF00155 Aminotransferase class I and II NKI27_RS11130 PF10672 S-adenosylmethionine-dependent methyltransferase NKI27_RS11130 PF17785 PUA-like domain NKI27_RS11145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NKI27_RS11145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NKI27_RS11145 PF11890 Domain of unknown function (DUF3410) NKI27_RS11150 PF00270 DEAD/DEAH box helicase NKI27_RS11150 PF00271 Helicase conserved C-terminal domain NKI27_RS11155 PF04315 Elongation factor P hydroxylase NKI27_RS11160 PF11412 Disulphide bond corrector protein DsbC NKI27_RS11160 PF02683 Cytochrome C biogenesis protein transmembrane region NKI27_RS11165 PF01206 Sulfurtransferase TusA NKI27_RS11175 PF01728 FtsJ-like methyltransferase NKI27_RS11175 PF18125 RlmM ferredoxin-like domain NKI27_RS11180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NKI27_RS11180 PF08447 PAS fold NKI27_RS11185 PF00027 Cyclic nucleotide-binding domain NKI27_RS11185 PF13545 Crp-like helix-turn-helix domain NKI27_RS11190 PF00115 Cytochrome C and Quinol oxidase polypeptide I NKI27_RS11205 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NKI27_RS11205 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NKI27_RS11210 PF13746 4Fe-4S dicluster domain NKI27_RS11210 PF12801 4Fe-4S binding domain NKI27_RS11210 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NKI27_RS11220 PF00403 Heavy-metal-associated domain NKI27_RS11235 PF06969 HemN C-terminal domain NKI27_RS11235 PF04055 Radical SAM superfamily NKI27_RS11240 PF00156 Phosphoribosyl transferase domain NKI27_RS11255 PF01171 PP-loop family NKI27_RS11260 PF00440 Bacterial regulatory proteins, tetR family NKI27_RS11260 PF08359 YsiA-like protein, C-terminal region NKI27_RS11265 PF16713 Enriched in aromatic and glycine Residues box NKI27_RS11265 PF00226 DnaJ domain NKI27_RS11265 PF01556 DnaJ C terminal domain NKI27_RS11295 PF13145 PPIC-type PPIASE domain NKI27_RS11300 PF00216 Bacterial DNA-binding protein NKI27_RS11305 PF00004 ATPase family associated with various cellular activities (AAA) NKI27_RS11305 PF05362 Lon protease (S16) C-terminal proteolytic domain NKI27_RS11305 PF02190 ATP-dependent protease La (LON) substrate-binding domain NKI27_RS11310 PF10431 C-terminal, D2-small domain, of ClpB protein NKI27_RS11310 PF06689 ClpX C4-type zinc finger NKI27_RS11310 PF07724 AAA domain (Cdc48 subfamily) NKI27_RS11315 PF00574 Clp protease NKI27_RS11320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NKI27_RS11320 PF05698 Bacterial trigger factor protein (TF) C-terminus NKI27_RS11320 PF05697 Bacterial trigger factor protein (TF) NKI27_RS11345 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NKI27_RS11345 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NKI27_RS11350 PF09190 DALR domain NKI27_RS11350 PF01406 tRNA synthetases class I (C) catalytic domain NKI27_RS11355 PF00749 tRNA synthetases class I (E and Q), catalytic domain NKI27_RS11355 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NKI27_RS11360 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NKI27_RS11365 PF12850 Calcineurin-like phosphoesterase superfamily domain NKI27_RS11370 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NKI27_RS11375 PF00330 Aconitase family (aconitate hydratase) NKI27_RS11375 PF06434 Aconitate hydratase 2 N-terminus NKI27_RS11375 PF11791 Aconitate B N-terminal domain NKI27_RS11390 PF00698 Acyl transferase domain NKI27_RS11390 PF08240 Alcohol dehydrogenase GroES-like domain NKI27_RS11390 PF16197 Ketoacyl-synthetase C-terminal extension NKI27_RS11390 PF00109 Beta-ketoacyl synthase, N-terminal domain NKI27_RS11390 PF02801 Beta-ketoacyl synthase, C-terminal domain NKI27_RS11390 PF08659 KR domain NKI27_RS11390 PF14765 Polyketide synthase dehydratase NKI27_RS11390 PF00550 Phosphopantetheine attachment site NKI27_RS11395 PF03328 HpcH/HpaI aldolase/citrate lyase family NKI27_RS11405 PF02515 CoA-transferase family III NKI27_RS11410 PF08240 Alcohol dehydrogenase GroES-like domain NKI27_RS11410 PF00107 Zinc-binding dehydrogenase NKI27_RS11415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS11415 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS11415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS11420 PF02310 B12 binding domain NKI27_RS11420 PF01642 Methylmalonyl-CoA mutase NKI27_RS11430 PF08240 Alcohol dehydrogenase GroES-like domain NKI27_RS11430 PF00107 Zinc-binding dehydrogenase NKI27_RS11440 PF01435 Peptidase family M48 NKI27_RS11445 PF02223 Thymidylate kinase NKI27_RS11450 PF02618 YceG-like family NKI27_RS11455 PF01063 Amino-transferase class IV NKI27_RS11460 PF00109 Beta-ketoacyl synthase, N-terminal domain NKI27_RS11460 PF02801 Beta-ketoacyl synthase, C-terminal domain NKI27_RS11465 PF00550 Phosphopantetheine attachment site NKI27_RS11475 PF00698 Acyl transferase domain NKI27_RS11480 PF02504 Fatty acid synthesis protein NKI27_RS11485 PF01783 Ribosomal L32p protein family NKI27_RS11490 PF02620 Large ribosomal RNA subunit accumulation protein YceD NKI27_RS11495 PF02545 Maf-like protein NKI27_RS11500 PF01343 Peptidase family S49 NKI27_RS11500 PF06965 Na+/H+ antiporter 1 NKI27_RS11505 PF13419 Haloacid dehalogenase-like hydrolase NKI27_RS11510 PF00849 RNA pseudouridylate synthase NKI27_RS11510 PF01479 S4 domain NKI27_RS11515 PF12111 Polyribonucleotide phosphorylase C terminal NKI27_RS11515 PF10150 Ribonuclease E/G family NKI27_RS11515 PF00575 S1 RNA binding domain NKI27_RS11525 PF00072 Response regulator receiver domain NKI27_RS11535 PF02811 PHP domain NKI27_RS11540 PF03795 YCII-related domain NKI27_RS11555 PF03737 Aldolase/RraA NKI27_RS11570 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NKI27_RS11570 PF00391 PEP-utilising enzyme, mobile domain NKI27_RS11570 PF02896 PEP-utilising enzyme, TIM barrel domain NKI27_RS11575 PF03618 Kinase/pyrophosphorylase NKI27_RS11580 PF08367 Peptidase M16C associated NKI27_RS11580 PF00675 Insulinase (Peptidase family M16) NKI27_RS11580 PF05193 Peptidase M16 inactive domain NKI27_RS11590 PF02142 MGS-like domain NKI27_RS11605 PF00072 Response regulator receiver domain NKI27_RS11630 PF00749 tRNA synthetases class I (E and Q), catalytic domain NKI27_RS11635 PF00753 Metallo-beta-lactamase superfamily NKI27_RS11640 PF01297 Zinc-uptake complex component A periplasmic NKI27_RS11650 PF01844 HNH endonuclease NKI27_RS11655 PF01207 Dihydrouridine synthase (Dus) NKI27_RS11660 PF00923 Transaldolase/Fructose-6-phosphate aldolase NKI27_RS11670 PF03009 Glycerophosphoryl diester phosphodiesterase family NKI27_RS11675 PF07992 Pyridine nucleotide-disulphide oxidoreductase NKI27_RS11675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NKI27_RS11680 PF04400 (Na+)-NQR maturation NqrM NKI27_RS11685 PF02424 ApbE family NKI27_RS11690 PF00111 2Fe-2S iron-sulfur cluster binding domain NKI27_RS11690 PF00970 Oxidoreductase FAD-binding domain NKI27_RS11690 PF00175 Oxidoreductase NAD-binding domain NKI27_RS11695 PF02508 Rnf-Nqr subunit, membrane protein NKI27_RS11700 PF02508 Rnf-Nqr subunit, membrane protein NKI27_RS11705 PF04205 FMN-binding domain NKI27_RS11710 PF03116 NQR2, RnfD, RnfE family NKI27_RS11715 PF11973 NQRA C-terminal domain NKI27_RS11715 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NKI27_RS11720 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NKI27_RS11720 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NKI27_RS11725 PF00270 DEAD/DEAH box helicase NKI27_RS11725 PF00271 Helicase conserved C-terminal domain NKI27_RS11725 PF03461 TRCF domain NKI27_RS11725 PF17757 UvrB interaction domain NKI27_RS11725 PF02559 CarD-like/TRCF domain NKI27_RS11735 PF01048 Phosphorylase superfamily NKI27_RS11740 PF00924 Mechanosensitive ion channel NKI27_RS11745 PF00933 Glycosyl hydrolase family 3 N terminal domain NKI27_RS11760 PF00909 Ammonium Transporter Family NKI27_RS11770 PF00571 CBS domain NKI27_RS11770 PF01743 Poly A polymerase head domain NKI27_RS11775 PF01207 Dihydrouridine synthase (Dus) NKI27_RS11780 PF00677 Lumazine binding domain NKI27_RS11785 PF05175 Methyltransferase small domain NKI27_RS11795 PF09905 DNA-binding protein VF530 NKI27_RS11800 PF01479 S4 domain NKI27_RS11800 PF00849 RNA pseudouridylate synthase NKI27_RS11810 PF00005 ABC transporter NKI27_RS11815 PF00005 ABC transporter NKI27_RS11815 PF12399 Branched-chain amino acid ATP-binding cassette transporter NKI27_RS11825 PF02653 Branched-chain amino acid transport system / permease component NKI27_RS11840 PF01625 Peptide methionine sulfoxide reductase NKI27_RS11845 PF03061 Thioesterase superfamily NKI27_RS11850 PF13847 Methyltransferase domain NKI27_RS11855 PF08468 Methyltransferase small domain N-terminal NKI27_RS11855 PF05175 Methyltransferase small domain NKI27_RS11870 PF00849 RNA pseudouridylate synthase NKI27_RS11875 PF03109 ABC1 family NKI27_RS11880 PF00849 RNA pseudouridylate synthase NKI27_RS11885 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NKI27_RS11885 PF06974 Protein of unknown function (DUF1298) NKI27_RS11890 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NKI27_RS11890 PF14850 DNA-binding domain of Proline dehydrogenase NKI27_RS11890 PF01619 Proline dehydrogenase NKI27_RS11890 PF00171 Aldehyde dehydrogenase family NKI27_RS11895 PF00474 Sodium:solute symporter family NKI27_RS11900 PF02567 Phenazine biosynthesis-like protein NKI27_RS11905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NKI27_RS11920 PF13673 Acetyltransferase (GNAT) domain NKI27_RS11935 PF04958 Arginine N-succinyltransferase beta subunit NKI27_RS11940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS11940 PF03466 LysR substrate binding domain NKI27_RS11945 PF00463 Isocitrate lyase family NKI27_RS11955 PF00313 'Cold-shock' DNA-binding domain NKI27_RS11965 PF01914 MarC family integral membrane protein NKI27_RS11970 PF00202 Aminotransferase class-III NKI27_RS11975 PF00501 AMP-binding enzyme NKI27_RS11990 PF05128 Domain of unknown function (DUF697) NKI27_RS11995 PF04317 YcjX-like family, DUF463 NKI27_RS12005 PF04973 Nicotinamide mononucleotide transporter NKI27_RS12045 PF01758 Sodium Bile acid symporter family NKI27_RS12050 PF13726 Na+-H+ antiporter family NKI27_RS12050 PF03553 Na+/H+ antiporter family NKI27_RS12055 PF03466 LysR substrate binding domain NKI27_RS12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS12060 PF07681 DoxX NKI27_RS12065 PF00107 Zinc-binding dehydrogenase NKI27_RS12065 PF08240 Alcohol dehydrogenase GroES-like domain NKI27_RS12075 PF01551 Peptidase family M23 NKI27_RS12115 PF00561 alpha/beta hydrolase fold NKI27_RS12125 PF00881 Nitroreductase family NKI27_RS12130 PF02810 SEC-C motif NKI27_RS12135 PF07690 Major Facilitator Superfamily NKI27_RS12145 PF01370 NAD dependent epimerase/dehydratase family NKI27_RS12150 PF13847 Methyltransferase domain NKI27_RS12155 PF01618 MotA/TolQ/ExbB proton channel family NKI27_RS12160 PF13677 Membrane MotB of proton-channel complex MotA/MotB NKI27_RS12160 PF00691 OmpA family NKI27_RS12165 PF08274 PhnA Zinc-Ribbon NKI27_RS12165 PF03831 PhnA domain NKI27_RS12170 PF00005 ABC transporter NKI27_RS12170 PF00664 ABC transporter transmembrane region NKI27_RS12175 PF01253 Translation initiation factor SUI1 NKI27_RS12185 PF01726 LexA DNA binding domain NKI27_RS12185 PF00717 Peptidase S24-like NKI27_RS12205 PF07044 Protein of unknown function (DUF1329) NKI27_RS12210 PF01339 CheB methylesterase NKI27_RS12210 PF00072 Response regulator receiver domain NKI27_RS12215 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS12215 PF05230 MASE2 domain NKI27_RS12220 PF04261 Dyp-type peroxidase family NKI27_RS12225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS12225 PF00183 Hsp90 protein NKI27_RS12260 PF00072 Response regulator receiver domain NKI27_RS12260 PF00158 Sigma-54 interaction domain NKI27_RS12305 PF00873 AcrB/AcrD/AcrF family NKI27_RS12310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NKI27_RS12320 PF00005 ABC transporter NKI27_RS12325 PF13472 GDSL-like Lipase/Acylhydrolase family NKI27_RS12330 PF00561 alpha/beta hydrolase fold NKI27_RS12335 PF00582 Universal stress protein family NKI27_RS12350 PF02127 Aminopeptidase I zinc metalloprotease (M18) NKI27_RS12365 PF10672 S-adenosylmethionine-dependent methyltransferase NKI27_RS12365 PF02926 THUMP domain NKI27_RS12365 PF01170 Putative RNA methylase family UPF0020 NKI27_RS12370 PF04957 Ribosome modulation factor NKI27_RS12375 PF01180 Dihydroorotate dehydrogenase NKI27_RS12385 PF01545 Cation efflux family NKI27_RS12385 PF16916 Dimerisation domain of Zinc Transporter NKI27_RS12390 PF17757 UvrB interaction domain NKI27_RS12390 PF12344 Ultra-violet resistance protein B NKI27_RS12390 PF04851 Type III restriction enzyme, res subunit NKI27_RS12390 PF00271 Helicase conserved C-terminal domain NKI27_RS12390 PF02151 UvrB/uvrC motif NKI27_RS12395 PF00155 Aminotransferase class I and II NKI27_RS12405 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NKI27_RS12410 PF18073 Rubredoxin metal binding domain NKI27_RS12420 PF00216 Bacterial DNA-binding protein NKI27_RS12425 PF00575 S1 RNA binding domain NKI27_RS12430 PF02224 Cytidylate kinase NKI27_RS12435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NKI27_RS12440 PF00155 Aminotransferase class I and II NKI27_RS12445 PF00800 Prephenate dehydratase NKI27_RS12445 PF01817 Chorismate mutase type II NKI27_RS12445 PF01842 ACT domain NKI27_RS12450 PF00266 Aminotransferase class-V NKI27_RS12455 PF03989 DNA gyrase C-terminal domain, beta-propeller NKI27_RS12455 PF00521 DNA gyrase/topoisomerase IV, subunit A NKI27_RS12460 PF17158 Membrane-associated sensor, integral membrane domain NKI27_RS12460 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS12465 PF01842 ACT domain NKI27_RS12465 PF00551 Formyl transferase NKI27_RS12470 PF01329 Pterin 4 alpha carbinolamine dehydratase NKI27_RS12475 PF05681 Fumarate hydratase (Fumerase) NKI27_RS12475 PF05683 Fumarase C-terminus NKI27_RS12490 PF00764 Arginosuccinate synthase NKI27_RS12495 PF00691 OmpA family NKI27_RS12495 PF13505 Outer membrane protein beta-barrel domain NKI27_RS12500 PF01979 Amidohydrolase family NKI27_RS12505 PF00929 Exonuclease NKI27_RS12510 PF10417 C-terminal domain of 1-Cys peroxiredoxin NKI27_RS12510 PF00578 AhpC/TSA family NKI27_RS12515 PF07516 SecA Wing and Scaffold domain NKI27_RS12515 PF02810 SEC-C motif NKI27_RS12515 PF07517 SecA DEAD-like domain NKI27_RS12515 PF01043 SecA preprotein cross-linking domain NKI27_RS12525 PF00106 short chain dehydrogenase NKI27_RS12535 PF05193 Peptidase M16 inactive domain NKI27_RS12535 PF16187 Middle or third domain of peptidase_M16 NKI27_RS12535 PF00675 Insulinase (Peptidase family M16) NKI27_RS12540 PF00929 Exonuclease NKI27_RS12540 PF08411 Exonuclease C-terminal NKI27_RS12575 PF02222 ATP-grasp domain NKI27_RS12585 PF00132 Bacterial transferase hexapeptide (six repeats) NKI27_RS12595 PF01784 NIF3 (NGG1p interacting factor 3) NKI27_RS12600 PF02769 AIR synthase related protein, C-terminal domain NKI27_RS12600 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NKI27_RS12600 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NKI27_RS12605 PF01464 Transglycosylase SLT domain NKI27_RS12605 PF00497 Bacterial extracellular solute-binding proteins, family 3 NKI27_RS12610 PF02631 RecX family NKI27_RS12625 PF02803 Thiolase, C-terminal domain NKI27_RS12625 PF00108 Thiolase, N-terminal domain NKI27_RS12630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NKI27_RS12630 PF00378 Enoyl-CoA hydratase/isomerase NKI27_RS12630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NKI27_RS12635 PF17804 Tail specific protease N-terminal domain NKI27_RS12635 PF03572 Peptidase family S41 NKI27_RS12635 PF00595 PDZ domain NKI27_RS12635 PF11818 C-terminal domain of tail specific protease (DUF3340) NKI27_RS12650 PF01008 Initiation factor 2 subunit family NKI27_RS12655 PF01979 Amidohydrolase family NKI27_RS12665 PF13419 Haloacid dehalogenase-like hydrolase NKI27_RS12670 PF00106 short chain dehydrogenase NKI27_RS12680 PF03918 Cytochrome C biogenesis protein NKI27_RS12685 PF08534 Redoxin NKI27_RS12690 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NKI27_RS12690 PF01578 Cytochrome C assembly protein NKI27_RS12695 PF03100 CcmE NKI27_RS12705 PF01578 Cytochrome C assembly protein NKI27_RS12710 PF03379 CcmB protein NKI27_RS12715 PF00005 ABC transporter NKI27_RS12730 PF07044 Protein of unknown function (DUF1329) NKI27_RS12735 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS12735 PF01590 GAF domain NKI27_RS12735 PF00563 EAL domain NKI27_RS12735 PF00360 Phytochrome region NKI27_RS12745 PF01584 CheW-like domain NKI27_RS12755 PF13614 AAA domain NKI27_RS12760 PF00691 OmpA family NKI27_RS12760 PF13677 Membrane MotB of proton-channel complex MotA/MotB NKI27_RS12765 PF01618 MotA/TolQ/ExbB proton channel family NKI27_RS12770 PF00072 Response regulator receiver domain NKI27_RS12770 PF01339 CheB methylesterase NKI27_RS12775 PF01584 CheW-like domain NKI27_RS12775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS12775 PF02895 Signal transducing histidine kinase, homodimeric domain NKI27_RS12775 PF00072 Response regulator receiver domain NKI27_RS12775 PF01627 Hpt domain NKI27_RS12780 PF04344 Chemotaxis phosphatase, CheZ NKI27_RS12785 PF00072 Response regulator receiver domain NKI27_RS12790 PF04539 Sigma-70 region 3 NKI27_RS12790 PF04545 Sigma-70, region 4 NKI27_RS12790 PF04542 Sigma-70 region 2 NKI27_RS12795 PF10609 NUBPL iron-transfer P-loop NTPase NKI27_RS12800 PF00448 SRP54-type protein, GTPase domain NKI27_RS12805 PF00771 FHIPEP family NKI27_RS12810 PF01312 FlhB HrpN YscU SpaS Family NKI27_RS12815 PF01311 Bacterial export proteins, family 1 NKI27_RS12820 PF01313 Bacterial export proteins, family 3 NKI27_RS12825 PF00813 FliP family NKI27_RS12835 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NKI27_RS12840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NKI27_RS12840 PF02154 Flagellar motor switch protein FliM NKI27_RS12860 PF00072 Response regulator receiver domain NKI27_RS12865 PF13466 STAS domain NKI27_RS12870 PF00072 Response regulator receiver domain NKI27_RS12870 PF01339 CheB methylesterase NKI27_RS12875 PF03975 CheD chemotactic sensory transduction NKI27_RS12880 PF01739 CheR methyltransferase, SAM binding domain NKI27_RS12880 PF03705 CheR methyltransferase, all-alpha domain NKI27_RS12885 PF01584 CheW-like domain NKI27_RS12890 PF01627 Hpt domain NKI27_RS12890 PF02895 Signal transducing histidine kinase, homodimeric domain NKI27_RS12890 PF09078 CheY binding NKI27_RS12890 PF01584 CheW-like domain NKI27_RS12890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS12895 PF00072 Response regulator receiver domain NKI27_RS12895 PF00486 Transcriptional regulatory protein, C terminal NKI27_RS12910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NKI27_RS12910 PF18269 T3SS EscN ATPase C-terminal domain NKI27_RS12920 PF01706 FliG C-terminal domain NKI27_RS12920 PF14841 FliG middle domain NKI27_RS12920 PF14842 FliG N-terminal domain NKI27_RS12925 PF01514 Secretory protein of YscJ/FliF family NKI27_RS12925 PF08345 Flagellar M-ring protein C-terminal NKI27_RS12930 PF02049 Flagellar hook-basal body complex protein FliE NKI27_RS12935 PF00072 Response regulator receiver domain NKI27_RS12935 PF00158 Sigma-54 interaction domain NKI27_RS12935 PF02954 Bacterial regulatory protein, Fis family NKI27_RS12940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS12940 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS12940 PF13188 PAS domain NKI27_RS12945 PF06490 Flagellar regulatory protein FleQ NKI27_RS12945 PF02954 Bacterial regulatory protein, Fis family NKI27_RS12945 PF00158 Sigma-54 interaction domain NKI27_RS12960 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NKI27_RS12965 PF02436 Conserved carboxylase domain NKI27_RS12965 PF00682 HMGL-like NKI27_RS12965 PF00364 Biotin-requiring enzyme NKI27_RS12970 PF04277 Oxaloacetate decarboxylase, gamma chain NKI27_RS12990 PF02599 Global regulator protein family NKI27_RS12995 PF13840 ACT domain NKI27_RS12995 PF01842 ACT domain NKI27_RS12995 PF00696 Amino acid kinase family NKI27_RS13000 PF02272 DHHA1 domain NKI27_RS13000 PF01411 tRNA synthetases class II (A) NKI27_RS13000 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NKI27_RS13020 PF03739 Lipopolysaccharide export system permease LptF/LptG NKI27_RS13025 PF03739 Lipopolysaccharide export system permease LptF/LptG NKI27_RS13030 PF00883 Cytosol aminopeptidase family, catalytic domain NKI27_RS13030 PF02789 Cytosol aminopeptidase family, N-terminal domain NKI27_RS13045 PF08264 Anticodon-binding domain of tRNA NKI27_RS13045 PF00133 tRNA synthetases class I (I, L, M and V) NKI27_RS13045 PF10458 Valyl tRNA synthetase tRNA binding arm NKI27_RS13050 PF02558 Ketopantoate reductase PanE/ApbA NKI27_RS13050 PF08546 Ketopantoate reductase PanE/ApbA C terminal NKI27_RS13070 PF00672 HAMP domain NKI27_RS13070 PF12729 Four helix bundle sensory module for signal transduction NKI27_RS13070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NKI27_RS13075 PF00480 ROK family NKI27_RS13080 PF07348 Syd protein (SUKH-2) NKI27_RS13085 PF17113 Regulatory signalling modulator protein AmpE NKI27_RS13090 PF01510 N-acetylmuramoyl-L-alanine amidase NKI27_RS13105 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NKI27_RS13105 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NKI27_RS13110 PF00563 EAL domain NKI27_RS13110 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS13110 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS13125 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NKI27_RS13130 PF00308 Bacterial dnaA protein NKI27_RS13135 PF01066 CDP-alcohol phosphatidyltransferase NKI27_RS13145 PF00586 AIR synthase related protein, N-terminal domain NKI27_RS13145 PF02769 AIR synthase related protein, C-terminal domain NKI27_RS13150 PF00551 Formyl transferase NKI27_RS13160 PF00270 DEAD/DEAH box helicase NKI27_RS13160 PF04408 Helicase associated domain (HA2) NKI27_RS13160 PF00271 Helicase conserved C-terminal domain NKI27_RS13160 PF08482 ATP-dependent helicase C-terminal NKI27_RS13175 PF05698 Bacterial trigger factor protein (TF) C-terminus NKI27_RS13200 PF01553 Acyltransferase NKI27_RS13230 PF00245 Alkaline phosphatase NKI27_RS13240 PF05525 Branched-chain amino acid transport protein NKI27_RS13245 PF00072 Response regulator receiver domain NKI27_RS13245 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS13250 PF12437 Glutamine synthetase type III N terminal NKI27_RS13250 PF00120 Glutamine synthetase, catalytic domain NKI27_RS13250 PF18318 Glutamine synthetase C-terminal domain NKI27_RS13265 PF01272 Transcription elongation factor, GreA/GreB, C-term NKI27_RS13265 PF14760 Rnk N-terminus NKI27_RS13280 PF07715 TonB-dependent Receptor Plug Domain NKI27_RS13280 PF00593 TonB dependent receptor NKI27_RS13295 PF00563 EAL domain NKI27_RS13295 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS13295 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS13300 PF00106 short chain dehydrogenase NKI27_RS13310 PF03167 Uracil DNA glycosylase superfamily NKI27_RS13315 PF02803 Thiolase, C-terminal domain NKI27_RS13315 PF00108 Thiolase, N-terminal domain NKI27_RS13335 PF00795 Carbon-nitrogen hydrolase NKI27_RS13335 PF00583 Acetyltransferase (GNAT) family NKI27_RS13340 PF04303 PrpF protein NKI27_RS13345 PF00330 Aconitase family (aconitate hydratase) NKI27_RS13345 PF00694 Aconitase C-terminal domain NKI27_RS13350 PF00285 Citrate synthase, C-terminal domain NKI27_RS13360 PF07729 FCD domain NKI27_RS13360 PF00392 Bacterial regulatory proteins, gntR family NKI27_RS13365 PF01136 Peptidase family U32 NKI27_RS13365 PF12392 Collagenase NKI27_RS13375 PF12833 Helix-turn-helix domain NKI27_RS13375 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NKI27_RS13390 PF07670 Nucleoside recognition NKI27_RS13395 PF00989 PAS fold NKI27_RS13395 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS13395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS13400 PF00072 Response regulator receiver domain NKI27_RS13400 PF00196 Bacterial regulatory proteins, luxR family NKI27_RS13405 PF01551 Peptidase family M23 NKI27_RS13420 PF13654 AAA domain NKI27_RS13420 PF05362 Lon protease (S16) C-terminal proteolytic domain NKI27_RS13445 PF04247 Invasion gene expression up-regulator, SirB NKI27_RS13450 PF01136 Peptidase family U32 NKI27_RS13455 PF01136 Peptidase family U32 NKI27_RS13460 PF16199 Radical_SAM C-terminal domain NKI27_RS13460 PF04055 Radical SAM superfamily NKI27_RS13465 PF02036 SCP-2 sterol transfer family NKI27_RS13475 PF00550 Phosphopantetheine attachment site NKI27_RS13480 PF02785 Biotin carboxylase C-terminal domain NKI27_RS13480 PF00289 Biotin carboxylase, N-terminal domain NKI27_RS13480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NKI27_RS13485 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NKI27_RS13485 PF12241 Trans-2-enoyl-CoA reductase catalytic region NKI27_RS13485 PF07055 Enoyl reductase FAD binding domain NKI27_RS13490 PF00109 Beta-ketoacyl synthase, N-terminal domain NKI27_RS13490 PF02801 Beta-ketoacyl synthase, C-terminal domain NKI27_RS13495 PF07977 FabA-like domain NKI27_RS13510 PF00154 recA bacterial DNA recombination protein NKI27_RS13515 PF05188 MutS domain II NKI27_RS13515 PF05192 MutS domain III NKI27_RS13515 PF05190 MutS family domain IV NKI27_RS13515 PF00488 MutS domain V NKI27_RS13515 PF01624 MutS domain I NKI27_RS13520 PF11953 Domain of unknown function (DUF3470) NKI27_RS13520 PF00037 4Fe-4S binding domain NKI27_RS13525 PF01351 Ribonuclease HII NKI27_RS13530 PF02684 Lipid-A-disaccharide synthetase NKI27_RS13535 PF00132 Bacterial transferase hexapeptide (six repeats) NKI27_RS13535 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NKI27_RS13540 PF07977 FabA-like domain NKI27_RS13545 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NKI27_RS13545 PF00132 Bacterial transferase hexapeptide (six repeats) NKI27_RS13555 PF07244 Surface antigen variable number repeat NKI27_RS13555 PF01103 Surface antigen NKI27_RS13560 PF02163 Peptidase family M50 NKI27_RS13560 PF17820 PDZ domain NKI27_RS13560 PF13180 PDZ domain NKI27_RS13565 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NKI27_RS13565 PF13288 DXP reductoisomerase C-terminal domain NKI27_RS13565 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NKI27_RS13575 PF01255 Putative undecaprenyl diphosphate synthase NKI27_RS13580 PF01765 Ribosome recycling factor NKI27_RS13585 PF00696 Amino acid kinase family NKI27_RS13590 PF00889 Elongation factor TS NKI27_RS13595 PF00318 Ribosomal protein S2 NKI27_RS13600 PF00557 Metallopeptidase family M24 NKI27_RS13605 PF01909 Nucleotidyltransferase domain NKI27_RS13605 PF01842 ACT domain NKI27_RS13605 PF08335 GlnD PII-uridylyltransferase NKI27_RS13605 PF01966 HD domain NKI27_RS13610 PF00155 Aminotransferase class I and II NKI27_RS13615 PF03960 ArsC family NKI27_RS13620 PF14602 Hexapeptide repeat of succinyl-transferase NKI27_RS13620 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle NKI27_RS13625 PF07687 Peptidase dimerisation domain NKI27_RS13625 PF01546 Peptidase family M20/M25/M40 NKI27_RS13630 PF13847 Methyltransferase domain NKI27_RS13650 PF04102 SlyX NKI27_RS13655 PF10431 C-terminal, D2-small domain, of ClpB protein NKI27_RS13655 PF17871 AAA lid domain NKI27_RS13655 PF07724 AAA domain (Cdc48 subfamily) NKI27_RS13655 PF00004 ATPase family associated with various cellular activities (AAA) NKI27_RS13665 PF05947 Type VI secretion system, TssF NKI27_RS13675 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NKI27_RS13695 PF00483 Nucleotidyl transferase NKI27_RS13695 PF01050 Mannose-6-phosphate isomerase NKI27_RS13700 PF02719 Polysaccharide biosynthesis protein NKI27_RS13705 PF02397 Bacterial sugar transferase NKI27_RS13710 PF01370 NAD dependent epimerase/dehydratase family NKI27_RS13720 PF02350 UDP-N-acetylglucosamine 2-epimerase NKI27_RS13730 PF08485 Polysaccharide biosynthesis protein C-terminal NKI27_RS13730 PF02719 Polysaccharide biosynthesis protein NKI27_RS13750 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NKI27_RS13755 PF00132 Bacterial transferase hexapeptide (six repeats) NKI27_RS13770 PF01609 Transposase DDE domain NKI27_RS13770 PF13808 DDE_Tnp_1-associated NKI27_RS13795 PF01501 Glycosyl transferase family 8 NKI27_RS13795 PF00535 Glycosyl transferase family 2 NKI27_RS13805 PF00535 Glycosyl transferase family 2 NKI27_RS13815 PF00005 ABC transporter NKI27_RS13815 PF08239 Bacterial SH3 domain NKI27_RS13840 PF00664 ABC transporter transmembrane region NKI27_RS13840 PF00005 ABC transporter NKI27_RS13845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NKI27_RS13845 PF00529 HlyD membrane-fusion protein of T1SS NKI27_RS13850 PF02321 Outer membrane efflux protein NKI27_RS13855 PF04321 RmlD substrate binding domain NKI27_RS13860 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NKI27_RS13865 PF00483 Nucleotidyl transferase NKI27_RS13870 PF16363 GDP-mannose 4,6 dehydratase NKI27_RS13875 PF01370 NAD dependent epimerase/dehydratase family NKI27_RS13880 PF10996 Beta-Casp domain NKI27_RS13880 PF00753 Metallo-beta-lactamase superfamily NKI27_RS13880 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NKI27_RS13890 PF10996 Beta-Casp domain NKI27_RS13890 PF00753 Metallo-beta-lactamase superfamily NKI27_RS13890 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NKI27_RS13895 PF02885 Glycosyl transferase family, helical bundle domain NKI27_RS13895 PF00591 Glycosyl transferase family, a/b domain NKI27_RS13895 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NKI27_RS13900 PF14572 Phosphoribosyl synthetase-associated domain NKI27_RS13900 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NKI27_RS13910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NKI27_RS13910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NKI27_RS13915 PF00132 Bacterial transferase hexapeptide (six repeats) NKI27_RS13920 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NKI27_RS13925 PF02350 UDP-N-acetylglucosamine 2-epimerase NKI27_RS13950 PF12697 Alpha/beta hydrolase family NKI27_RS13950 PF08241 Methyltransferase domain NKI27_RS13965 PF00534 Glycosyl transferases group 1 NKI27_RS13980 PF00535 Glycosyl transferase family 2 NKI27_RS14010 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NKI27_RS14010 PF00437 Type II/IV secretion system protein NKI27_RS14015 PF00482 Type II secretion system (T2SS), protein F NKI27_RS14020 PF01478 Type IV leader peptidase family NKI27_RS14020 PF06750 Bacterial Peptidase A24 N-terminal domain NKI27_RS14035 PF01121 Dephospho-CoA kinase NKI27_RS14040 PF03884 DNA gyrase inhibitor YacG NKI27_RS14045 PF01230 HIT domain NKI27_RS14050 PF03788 LrgA family NKI27_RS14055 PF04172 LrgB-like family NKI27_RS14060 PF01980 tRNA-methyltransferase O NKI27_RS14060 PF18389 TrmO C-terminal domain NKI27_RS14070 PF03692 Putative zinc- or iron-chelating domain NKI27_RS14075 PF00072 Response regulator receiver domain NKI27_RS14075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS14075 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS14075 PF01627 Hpt domain NKI27_RS14075 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NKI27_RS14075 PF00672 HAMP domain NKI27_RS14080 PF01022 Bacterial regulatory protein, arsR family NKI27_RS14115 PF00196 Bacterial regulatory proteins, luxR family NKI27_RS14115 PF00072 Response regulator receiver domain NKI27_RS14120 PF07044 Protein of unknown function (DUF1329) NKI27_RS14130 PF00108 Thiolase, N-terminal domain NKI27_RS14130 PF02803 Thiolase, C-terminal domain NKI27_RS14135 PF03969 AFG1-like ATPase NKI27_RS14145 PF01784 NIF3 (NGG1p interacting factor 3) NKI27_RS14150 PF00815 Histidinol dehydrogenase NKI27_RS14155 PF01634 ATP phosphoribosyltransferase NKI27_RS14160 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NKI27_RS14165 PF01722 BolA-like protein NKI27_RS14185 PF02405 Permease MlaE NKI27_RS14190 PF00005 ABC transporter NKI27_RS14195 PF01699 Sodium/calcium exchanger protein NKI27_RS14200 PF00571 CBS domain NKI27_RS14200 PF01380 SIS domain NKI27_RS14215 PF00005 ABC transporter NKI27_RS14215 PF12399 Branched-chain amino acid ATP-binding cassette transporter NKI27_RS14220 PF04552 Sigma-54, DNA binding domain NKI27_RS14220 PF04963 Sigma-54 factor, core binding domain NKI27_RS14220 PF00309 Sigma-54 factor, Activator interacting domain (AID) NKI27_RS14225 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NKI27_RS14230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NKI27_RS14235 PF03668 P-loop ATPase protein family NKI27_RS14240 PF00381 PTS HPr component phosphorylation site NKI27_RS14245 PF00571 CBS domain NKI27_RS14245 PF01769 Divalent cation transporter NKI27_RS14245 PF03448 MgtE intracellular N domain NKI27_RS14250 PF04751 Protein of unknown function (DUF615) NKI27_RS14255 PF00795 Carbon-nitrogen hydrolase NKI27_RS14265 PF10150 Ribonuclease E/G family NKI27_RS14265 PF00575 S1 RNA binding domain NKI27_RS14270 PF02545 Maf-like protein NKI27_RS14275 PF04093 rod shape-determining protein MreD NKI27_RS14280 PF04085 rod shape-determining protein MreC NKI27_RS14290 PF02686 Glu-tRNAGln amidotransferase C subunit NKI27_RS14295 PF01425 Amidase NKI27_RS14300 PF02934 GatB/GatE catalytic domain NKI27_RS14300 PF02637 GatB domain NKI27_RS14305 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NKI27_RS14310 PF02565 Recombination protein O C terminal NKI27_RS14310 PF11967 Recombination protein O N terminal NKI27_RS14315 PF07650 KH domain NKI27_RS14315 PF01926 50S ribosome-binding GTPase NKI27_RS14320 PF00035 Double-stranded RNA binding motif NKI27_RS14320 PF14622 Ribonuclease-III-like NKI27_RS14330 PF10502 Signal peptidase, peptidase S26 NKI27_RS14335 PF06421 GTP-binding protein LepA C-terminus NKI27_RS14335 PF03144 Elongation factor Tu domain 2 NKI27_RS14335 PF00009 Elongation factor Tu GTP binding domain NKI27_RS14335 PF00679 Elongation factor G C-terminus NKI27_RS14340 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS14340 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS14340 PF00563 EAL domain NKI27_RS14345 PF13180 PDZ domain NKI27_RS14345 PF17820 PDZ domain NKI27_RS14355 PF03888 MucB/RseB N-terminal domain NKI27_RS14355 PF17188 MucB/RseB C-terminal domain NKI27_RS14360 PF03873 Anti sigma-E protein RseA, C-terminal domain NKI27_RS14360 PF03872 Anti sigma-E protein RseA, N-terminal domain NKI27_RS14365 PF04542 Sigma-70 region 2 NKI27_RS14365 PF08281 Sigma-70, region 4 NKI27_RS14370 PF02910 Fumarate reductase flavoprotein C-term NKI27_RS14370 PF00890 FAD binding domain NKI27_RS14375 PF03937 Flavinator of succinate dehydrogenase NKI27_RS14390 PF03167 Uracil DNA glycosylase superfamily NKI27_RS14395 PF01336 OB-fold nucleic acid binding domain NKI27_RS14395 PF00152 tRNA synthetases class II (D, K and N) NKI27_RS14410 PF17768 RecJ OB domain NKI27_RS14410 PF02272 DHHA1 domain NKI27_RS14410 PF01368 DHH family NKI27_RS14415 PF14821 Threonine synthase N terminus NKI27_RS14415 PF00291 Pyridoxal-phosphate dependent enzyme NKI27_RS14420 PF01842 ACT domain NKI27_RS14420 PF03447 Homoserine dehydrogenase, NAD binding domain NKI27_RS14420 PF00742 Homoserine dehydrogenase NKI27_RS14425 PF10411 Disulfide bond isomerase protein N-terminus NKI27_RS14425 PF13098 Thioredoxin-like domain NKI27_RS14430 PF01245 Ribosomal protein L19 NKI27_RS14435 PF01746 tRNA (Guanine-1)-methyltransferase NKI27_RS14440 PF01782 RimM N-terminal domain NKI27_RS14440 PF05239 PRC-barrel domain NKI27_RS14445 PF00886 Ribosomal protein S16 NKI27_RS14450 PF02978 Signal peptide binding domain NKI27_RS14450 PF02881 SRP54-type protein, helical bundle domain NKI27_RS14450 PF00448 SRP54-type protein, GTPase domain NKI27_RS14460 PF01595 Cyclin M transmembrane N-terminal domain NKI27_RS14460 PF03471 Transporter associated domain NKI27_RS14460 PF00571 CBS domain NKI27_RS14475 PF00462 Glutaredoxin NKI27_RS14480 PF00202 Aminotransferase class-III NKI27_RS14485 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NKI27_RS14485 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NKI27_RS14490 PF08402 TOBE domain NKI27_RS14490 PF00005 ABC transporter NKI27_RS14495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NKI27_RS14495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NKI27_RS14500 PF08220 DeoR-like helix-turn-helix domain NKI27_RS14500 PF00455 DeoR C terminal sensor domain NKI27_RS14505 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NKI27_RS14505 PF01266 FAD dependent oxidoreductase NKI27_RS14510 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS14510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS14510 PF00672 HAMP domain NKI27_RS14515 PF00486 Transcriptional regulatory protein, C terminal NKI27_RS14515 PF00072 Response regulator receiver domain NKI27_RS14520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NKI27_RS14545 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS14545 PF00072 Response regulator receiver domain NKI27_RS14550 PF04264 YceI-like domain NKI27_RS14555 PF01292 Prokaryotic cytochrome b561 NKI27_RS14560 PF00563 EAL domain NKI27_RS14560 PF05231 MASE1 NKI27_RS14570 PF10263 SprT-like family NKI27_RS14575 PF00155 Aminotransferase class I and II NKI27_RS14580 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NKI27_RS14580 PF00293 NUDIX domain NKI27_RS14580 PF09297 NADH pyrophosphatase zinc ribbon domain NKI27_RS14590 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NKI27_RS14590 PF00072 Response regulator receiver domain NKI27_RS14590 PF01627 Hpt domain NKI27_RS14590 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS14590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS14590 PF00672 HAMP domain NKI27_RS14600 PF07859 alpha/beta hydrolase fold NKI27_RS14605 PF06167 Glucose-regulated metallo-peptidase M90 NKI27_RS14615 PF00136 DNA polymerase family B NKI27_RS14615 PF03104 DNA polymerase family B, exonuclease domain NKI27_RS14625 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS14625 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS14625 PF00563 EAL domain NKI27_RS14630 PF09905 DNA-binding protein VF530 NKI27_RS14645 PF00005 ABC transporter NKI27_RS14645 PF12848 ABC transporter NKI27_RS14650 PF01272 Transcription elongation factor, GreA/GreB, C-term NKI27_RS14650 PF03449 Transcription elongation factor, N-terminal NKI27_RS14665 PF07683 Cobalamin synthesis protein cobW C-terminal domain NKI27_RS14665 PF02492 CobW/HypB/UreG, nucleotide-binding domain NKI27_RS14680 PF00672 HAMP domain NKI27_RS14680 PF17200 Single Cache domain 2 NKI27_RS14680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NKI27_RS14685 PF00672 HAMP domain NKI27_RS14685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NKI27_RS14685 PF02743 Cache domain NKI27_RS14690 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NKI27_RS14690 PF12833 Helix-turn-helix domain NKI27_RS14700 PF00892 EamA-like transporter family NKI27_RS14705 PF00793 DAHP synthetase I family NKI27_RS14725 PF00873 AcrB/AcrD/AcrF family NKI27_RS14730 PF13533 Biotin-lipoyl like NKI27_RS14740 PF01212 Beta-eliminating lyase NKI27_RS14755 PF00027 Cyclic nucleotide-binding domain NKI27_RS14755 PF00520 Ion transport protein NKI27_RS14770 PF01464 Transglycosylase SLT domain NKI27_RS14795 PF01556 DnaJ C terminal domain NKI27_RS14795 PF00226 DnaJ domain NKI27_RS14810 PF00873 AcrB/AcrD/AcrF family NKI27_RS14820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NKI27_RS14835 PF01810 LysE type translocator NKI27_RS14880 PF00196 Bacterial regulatory proteins, luxR family NKI27_RS14880 PF17874 MalT-like TPR region NKI27_RS14895 PF00155 Aminotransferase class I and II NKI27_RS14895 PF00392 Bacterial regulatory proteins, gntR family NKI27_RS14900 PF03969 AFG1-like ATPase NKI27_RS14905 PF00849 RNA pseudouridylate synthase NKI27_RS14905 PF01479 S4 domain NKI27_RS14910 PF00270 DEAD/DEAH box helicase NKI27_RS14910 PF00271 Helicase conserved C-terminal domain NKI27_RS14930 PF05971 RNA methyltransferase NKI27_RS14935 PF01553 Acyltransferase NKI27_RS14950 PF00271 Helicase conserved C-terminal domain NKI27_RS14950 PF04851 Type III restriction enzyme, res subunit NKI27_RS14990 PF00149 Calcineurin-like phosphoesterase NKI27_RS14990 PF12320 Type 5 capsule protein repressor C-terminal domain NKI27_RS14995 PF13476 AAA domain NKI27_RS15010 PF00270 DEAD/DEAH box helicase NKI27_RS15010 PF00271 Helicase conserved C-terminal domain NKI27_RS15015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NKI27_RS15015 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NKI27_RS15025 PF00881 Nitroreductase family NKI27_RS15030 PF05958 tRNA (Uracil-5-)-methyltransferase NKI27_RS15045 PF00005 ABC transporter NKI27_RS15045 PF00664 ABC transporter transmembrane region NKI27_RS15060 PF00106 short chain dehydrogenase NKI27_RS15065 PF00561 alpha/beta hydrolase fold NKI27_RS15075 PF00795 Carbon-nitrogen hydrolase NKI27_RS15085 PF00924 Mechanosensitive ion channel NKI27_RS15085 PF05552 Conserved TM helix NKI27_RS15090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS15090 PF00986 DNA gyrase B subunit, carboxyl terminus NKI27_RS15090 PF01751 Toprim domain NKI27_RS15090 PF00204 DNA gyrase B NKI27_RS15100 PF00082 Subtilase family NKI27_RS15100 PF01483 Proprotein convertase P-domain NKI27_RS15105 PF01425 Amidase NKI27_RS15115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS15115 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS15115 PF01627 Hpt domain NKI27_RS15115 PF00072 Response regulator receiver domain NKI27_RS15115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NKI27_RS15115 PF00672 HAMP domain NKI27_RS15120 PF17932 Tetracyclin repressor-like, C-terminal domain NKI27_RS15120 PF00440 Bacterial regulatory proteins, tetR family NKI27_RS15135 PF01039 Carboxyl transferase domain NKI27_RS15140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS15140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS15140 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS15145 PF00378 Enoyl-CoA hydratase/isomerase NKI27_RS15150 PF00364 Biotin-requiring enzyme NKI27_RS15150 PF00289 Biotin carboxylase, N-terminal domain NKI27_RS15150 PF02785 Biotin carboxylase C-terminal domain NKI27_RS15150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NKI27_RS15155 PF00106 short chain dehydrogenase NKI27_RS15170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS15170 PF03466 LysR substrate binding domain NKI27_RS15180 PF08443 RimK-like ATP-grasp domain NKI27_RS15180 PF18030 RimK PreATP-grasp domain NKI27_RS15190 PF08443 RimK-like ATP-grasp domain NKI27_RS15190 PF18030 RimK PreATP-grasp domain NKI27_RS15195 PF17969 L,D-transpeptidase C-terminal domain NKI27_RS15195 PF03734 L,D-transpeptidase catalytic domain NKI27_RS15205 PF00860 Permease family NKI27_RS15210 PF00156 Phosphoribosyl transferase domain NKI27_RS15220 PF01544 CorA-like Mg2+ transporter protein NKI27_RS15230 PF00691 OmpA family NKI27_RS15240 PF03448 MgtE intracellular N domain NKI27_RS15240 PF01769 Divalent cation transporter NKI27_RS15240 PF00571 CBS domain NKI27_RS15260 PF02308 MgtC family NKI27_RS15265 PF00849 RNA pseudouridylate synthase NKI27_RS15265 PF01479 S4 domain NKI27_RS15270 PF03109 ABC1 family NKI27_RS15275 PF01557 Fumarylacetoacetate (FAA) hydrolase family NKI27_RS15280 PF02913 FAD linked oxidases, C-terminal domain NKI27_RS15280 PF01565 FAD binding domain NKI27_RS15285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NKI27_RS15285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NKI27_RS15290 PF13488 Glycine zipper NKI27_RS15290 PF00691 OmpA family NKI27_RS15300 PF00271 Helicase conserved C-terminal domain NKI27_RS15300 PF00270 DEAD/DEAH box helicase NKI27_RS15305 PF00924 Mechanosensitive ion channel NKI27_RS15305 PF12795 Mechanosensitive ion channel porin domain NKI27_RS15305 PF12794 Mechanosensitive ion channel inner membrane domain 1 NKI27_RS15320 PF01116 Fructose-bisphosphate aldolase class-II NKI27_RS15325 PF00162 Phosphoglycerate kinase NKI27_RS15330 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NKI27_RS15330 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NKI27_RS15335 PF02780 Transketolase, C-terminal domain NKI27_RS15335 PF00456 Transketolase, thiamine diphosphate binding domain NKI27_RS15335 PF02779 Transketolase, pyrimidine binding domain NKI27_RS15360 PF04717 Type VI secretion system, phage-baseplate injector NKI27_RS15365 PF01022 Bacterial regulatory protein, arsR family NKI27_RS15370 PF02773 S-adenosylmethionine synthetase, C-terminal domain NKI27_RS15370 PF02772 S-adenosylmethionine synthetase, central domain NKI27_RS15370 PF00438 S-adenosylmethionine synthetase, N-terminal domain NKI27_RS15375 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NKI27_RS15375 PF05221 S-adenosyl-L-homocysteine hydrolase NKI27_RS15380 PF02219 Methylenetetrahydrofolate reductase NKI27_RS15385 PF04452 RNA methyltransferase NKI27_RS15390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NKI27_RS15390 PF00529 HlyD membrane-fusion protein of T1SS NKI27_RS15395 PF00873 AcrB/AcrD/AcrF family NKI27_RS15425 PF04286 Protein of unknown function (DUF445) NKI27_RS15435 PF03631 Virulence factor BrkB NKI27_RS15440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NKI27_RS15440 PF00072 Response regulator receiver domain NKI27_RS15440 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS15440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS15440 PF00672 HAMP domain NKI27_RS15440 PF01627 Hpt domain NKI27_RS15445 PF08298 PrkA AAA domain NKI27_RS15445 PF06798 PrkA serine protein kinase C-terminal domain NKI27_RS15450 PF04285 Protein of unknown function (DUF444) NKI27_RS15455 PF04293 SpoVR like protein NKI27_RS15460 PF11944 Protein of unknown function (DUF3461) NKI27_RS15470 PF01458 Uncharacterized protein family (UPF0051) NKI27_RS15475 PF00005 ABC transporter NKI27_RS15480 PF01458 Uncharacterized protein family (UPF0051) NKI27_RS15485 PF00266 Aminotransferase class-V NKI27_RS15490 PF01521 Iron-sulphur cluster biosynthesis NKI27_RS15495 PF01883 Iron-sulfur cluster assembly protein NKI27_RS15500 PF02657 Fe-S metabolism associated domain NKI27_RS15520 PF00365 Phosphofructokinase NKI27_RS15535 PF00486 Transcriptional regulatory protein, C terminal NKI27_RS15535 PF00072 Response regulator receiver domain NKI27_RS15540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS15550 PF00462 Glutaredoxin NKI27_RS15555 PF00440 Bacterial regulatory proteins, tetR family NKI27_RS15560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NKI27_RS15565 PF00873 AcrB/AcrD/AcrF family NKI27_RS15575 PF00691 OmpA family NKI27_RS15575 PF05736 OprF membrane domain NKI27_RS15585 PF00144 Beta-lactamase NKI27_RS15595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS15595 PF03466 LysR substrate binding domain NKI27_RS15600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NKI27_RS15600 PF00289 Biotin carboxylase, N-terminal domain NKI27_RS15600 PF02785 Biotin carboxylase C-terminal domain NKI27_RS15605 PF00682 HMGL-like NKI27_RS15605 PF02436 Conserved carboxylase domain NKI27_RS15605 PF00364 Biotin-requiring enzyme NKI27_RS15610 PF00484 Carbonic anhydrase NKI27_RS15615 PF05724 Thiopurine S-methyltransferase (TPMT) NKI27_RS15620 PF05154 TM2 domain NKI27_RS15625 PF05656 Protein of unknown function (DUF805) NKI27_RS15645 PF07308 Protein of unknown function (DUF1456) NKI27_RS15650 PF10928 Protein of unknown function (DUF2810) NKI27_RS15665 PF00005 ABC transporter NKI27_RS15685 PF03971 Monomeric isocitrate dehydrogenase NKI27_RS15695 PF03848 Tellurite resistance protein TehB NKI27_RS15700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS15700 PF03466 LysR substrate binding domain NKI27_RS15705 PF06062 Uncharacterised protein family (UPF0231) NKI27_RS15715 PF03793 PASTA domain NKI27_RS15715 PF00069 Protein kinase domain NKI27_RS15720 PF07690 Major Facilitator Superfamily NKI27_RS15725 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NKI27_RS15725 PF04324 BFD-like [2Fe-2S] binding domain NKI27_RS15725 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NKI27_RS15725 PF07992 Pyridine nucleotide-disulphide oxidoreductase NKI27_RS15725 PF18267 Rubredoxin NAD+ reductase C-terminal domain NKI27_RS15735 PF01568 Molydopterin dinucleotide binding domain NKI27_RS15735 PF04324 BFD-like [2Fe-2S] binding domain NKI27_RS15735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NKI27_RS15735 PF00384 Molybdopterin oxidoreductase NKI27_RS15740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NKI27_RS15755 PF08443 RimK-like ATP-grasp domain NKI27_RS15755 PF18030 RimK PreATP-grasp domain NKI27_RS15755 PF02080 TrkA-C domain NKI27_RS15770 PF01740 STAS domain NKI27_RS15770 PF00916 Sulfate permease family NKI27_RS15775 PF00849 RNA pseudouridylate synthase NKI27_RS15775 PF01479 S4 domain NKI27_RS15780 PF01709 Transcriptional regulator NKI27_RS15790 PF00924 Mechanosensitive ion channel NKI27_RS15795 PF00849 RNA pseudouridylate synthase NKI27_RS15795 PF01479 S4 domain NKI27_RS15800 PF00472 RF-1 domain NKI27_RS15815 PF12833 Helix-turn-helix domain NKI27_RS15815 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NKI27_RS15820 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NKI27_RS15830 PF03109 ABC1 family NKI27_RS15835 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NKI27_RS15835 PF04055 Radical SAM superfamily NKI27_RS15840 PF03099 Biotin/lipoate A/B protein ligase family NKI27_RS15845 PF04359 Protein of unknown function (DUF493) NKI27_RS15850 PF01063 Amino-transferase class IV NKI27_RS15855 PF07943 Penicillin-binding protein 5, C-terminal domain NKI27_RS15855 PF00768 D-alanyl-D-alanine carboxypeptidase NKI27_RS15860 PF03330 Lytic transglycolase NKI27_RS15860 PF05036 Sporulation related domain NKI27_RS15865 PF13406 Transglycosylase SLT domain NKI27_RS15870 PF01098 Cell cycle protein NKI27_RS15875 PF03717 Penicillin-binding Protein dimerisation domain NKI27_RS15875 PF00905 Penicillin binding protein transpeptidase domain NKI27_RS15880 PF02590 Predicted SPOUT methyltransferase NKI27_RS15890 PF01467 Cytidylyltransferase-like NKI27_RS15895 PF00171 Aldehyde dehydrogenase family NKI27_RS15910 PF09335 SNARE associated Golgi protein NKI27_RS15915 PF00004 ATPase family associated with various cellular activities (AAA) NKI27_RS15915 PF02190 ATP-dependent protease La (LON) substrate-binding domain NKI27_RS15915 PF05362 Lon protease (S16) C-terminal proteolytic domain NKI27_RS15925 PF07885 Ion channel NKI27_RS15935 PF00920 Dehydratase family NKI27_RS15940 PF00186 Dihydrofolate reductase NKI27_RS15945 PF08447 PAS fold NKI27_RS15945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NKI27_RS15945 PF08447 PAS fold NKI27_RS15945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NKI27_RS15950 PF00303 Thymidylate synthase NKI27_RS15955 PF01790 Prolipoprotein diacylglyceryl transferase NKI27_RS15960 PF01925 Sulfite exporter TauE/SafE NKI27_RS15975 PF00691 OmpA family NKI27_RS15975 PF13677 Membrane MotB of proton-channel complex MotA/MotB NKI27_RS15980 PF01618 MotA/TolQ/ExbB proton channel family NKI27_RS15985 PF02609 Exonuclease VII small subunit NKI27_RS15990 PF00348 Polyprenyl synthetase NKI27_RS15995 PF02779 Transketolase, pyrimidine binding domain NKI27_RS15995 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NKI27_RS15995 PF02780 Transketolase, C-terminal domain NKI27_RS16000 PF00925 GTP cyclohydrolase II NKI27_RS16005 PF06463 Molybdenum Cofactor Synthesis C NKI27_RS16005 PF04055 Radical SAM superfamily NKI27_RS16010 PF01967 MoaC family NKI27_RS16015 PF02581 Thiamine monophosphate synthase NKI27_RS16020 PF01960 ArgJ family NKI27_RS16025 PF02810 SEC-C motif NKI27_RS16025 PF07517 SecA DEAD-like domain NKI27_RS16025 PF01043 SecA preprotein cross-linking domain NKI27_RS16025 PF07516 SecA Wing and Scaffold domain NKI27_RS16030 PF01476 LysM domain NKI27_RS16030 PF01551 Peptidase family M23 NKI27_RS16030 PF08525 Opacity-associated protein A N-terminal motif NKI27_RS16040 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NKI27_RS16045 PF12327 FtsZ family, C-terminal domain NKI27_RS16045 PF00091 Tubulin/FtsZ family, GTPase domain NKI27_RS16050 PF02491 SHS2 domain inserted in FTSA NKI27_RS16055 PF03799 Cell division protein FtsQ NKI27_RS16055 PF08478 POTRA domain, FtsQ-type NKI27_RS16060 PF07478 D-ala D-ala ligase C-terminus NKI27_RS16060 PF01820 D-ala D-ala ligase N-terminus NKI27_RS16065 PF01225 Mur ligase family, catalytic domain NKI27_RS16065 PF02875 Mur ligase family, glutamate ligase domain NKI27_RS16065 PF08245 Mur ligase middle domain NKI27_RS16070 PF04101 Glycosyltransferase family 28 C-terminal domain NKI27_RS16070 PF03033 Glycosyltransferase family 28 N-terminal domain NKI27_RS16075 PF01098 Cell cycle protein NKI27_RS16080 PF02875 Mur ligase family, glutamate ligase domain NKI27_RS16080 PF08245 Mur ligase middle domain NKI27_RS16085 PF00953 Glycosyl transferase family 4 NKI27_RS16085 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NKI27_RS16090 PF01225 Mur ligase family, catalytic domain NKI27_RS16090 PF02875 Mur ligase family, glutamate ligase domain NKI27_RS16090 PF08245 Mur ligase middle domain NKI27_RS16095 PF01225 Mur ligase family, catalytic domain NKI27_RS16095 PF02875 Mur ligase family, glutamate ligase domain NKI27_RS16095 PF08245 Mur ligase middle domain NKI27_RS16100 PF00905 Penicillin binding protein transpeptidase domain NKI27_RS16100 PF03717 Penicillin-binding Protein dimerisation domain NKI27_RS16105 PF04999 Cell division protein FtsL NKI27_RS16110 PF01795 MraW methylase family NKI27_RS16115 PF02381 MraZ protein, putative antitoxin-like NKI27_RS16125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NKI27_RS16130 PF04348 LppC putative lipoprotein NKI27_RS16135 PF02021 Uncharacterised protein family UPF0102 NKI27_RS16140 PF13580 SIS domain NKI27_RS16145 PF04386 Stringent starvation protein B NKI27_RS16150 PF00043 Glutathione S-transferase, C-terminal domain NKI27_RS16150 PF02798 Glutathione S-transferase, N-terminal domain NKI27_RS16155 PF02167 Cytochrome C1 family NKI27_RS16160 PF00033 Cytochrome b/b6/petB NKI27_RS16160 PF00032 Cytochrome b(C-terminal)/b6/petD NKI27_RS16165 PF00355 Rieske [2Fe-2S] domain NKI27_RS16165 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NKI27_RS16170 PF00380 Ribosomal protein S9/S16 NKI27_RS16175 PF00572 Ribosomal protein L13 NKI27_RS16180 PF01026 TatD related DNase NKI27_RS16185 PF03144 Elongation factor Tu domain 2 NKI27_RS16185 PF16658 Class II release factor RF3, C-terminal domain NKI27_RS16185 PF00009 Elongation factor Tu GTP binding domain NKI27_RS16190 PF02743 Cache domain NKI27_RS16190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS16190 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS16195 PF00072 Response regulator receiver domain NKI27_RS16200 PF00583 Acetyltransferase (GNAT) family NKI27_RS16210 PF00682 HMGL-like NKI27_RS16210 PF08502 LeuA allosteric (dimerisation) domain NKI27_RS16215 PF12833 Helix-turn-helix domain NKI27_RS16215 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NKI27_RS16235 PF01066 CDP-alcohol phosphatidyltransferase NKI27_RS16240 PF10369 Small subunit of acetolactate synthase NKI27_RS16245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NKI27_RS16245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NKI27_RS16245 PF00205 Thiamine pyrophosphate enzyme, central domain NKI27_RS16255 PF10431 C-terminal, D2-small domain, of ClpB protein NKI27_RS16255 PF00004 ATPase family associated with various cellular activities (AAA) NKI27_RS16255 PF17871 AAA lid domain NKI27_RS16255 PF02861 Clp amino terminal domain, pathogenicity island component NKI27_RS16255 PF07724 AAA domain (Cdc48 subfamily) NKI27_RS16260 PF02578 Multi-copper polyphenol oxidoreductase laccase NKI27_RS16265 PF01479 S4 domain NKI27_RS16265 PF00849 RNA pseudouridylate synthase NKI27_RS16270 PF13525 Outer membrane lipoprotein NKI27_RS16275 PF00795 Carbon-nitrogen hydrolase NKI27_RS16275 PF02540 NAD synthase NKI27_RS16280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS16280 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS16285 PF00072 Response regulator receiver domain NKI27_RS16285 PF00158 Sigma-54 interaction domain NKI27_RS16285 PF02954 Bacterial regulatory protein, Fis family NKI27_RS16290 PF01266 FAD dependent oxidoreductase NKI27_RS16310 PF05567 Neisseria PilC beta-propeller domain NKI27_RS16335 PF02401 LytB protein NKI27_RS16340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NKI27_RS16345 PF01252 Signal peptidase (SPase) II NKI27_RS16350 PF08264 Anticodon-binding domain of tRNA NKI27_RS16350 PF06827 Zinc finger found in FPG and IleRS NKI27_RS16350 PF00133 tRNA synthetases class I (I, L, M and V) NKI27_RS16355 PF06574 FAD synthetase NKI27_RS16355 PF01687 Riboflavin kinase NKI27_RS16360 PF03023 Lipid II flippase MurJ NKI27_RS16365 PF01649 Ribosomal protein S20 NKI27_RS16370 PF00696 Amino acid kinase family NKI27_RS16370 PF01472 PUA domain NKI27_RS16375 PF01018 GTP1/OBG NKI27_RS16375 PF01926 50S ribosome-binding GTPase NKI27_RS16380 PF01016 Ribosomal L27 protein NKI27_RS16385 PF00829 Ribosomal prokaryotic L21 protein NKI27_RS16390 PF00348 Polyprenyl synthetase NKI27_RS16395 PF06974 Protein of unknown function (DUF1298) NKI27_RS16395 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NKI27_RS16410 PF04608 Phosphatidylglycerophosphatase A NKI27_RS16415 PF00586 AIR synthase related protein, N-terminal domain NKI27_RS16415 PF02769 AIR synthase related protein, C-terminal domain NKI27_RS16420 PF01029 NusB family NKI27_RS16425 PF00885 6,7-dimethyl-8-ribityllumazine synthase NKI27_RS16430 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NKI27_RS16430 PF00925 GTP cyclohydrolase II NKI27_RS16435 PF00677 Lumazine binding domain NKI27_RS16440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NKI27_RS16440 PF01872 RibD C-terminal domain NKI27_RS16445 PF03477 ATP cone domain NKI27_RS16450 PF00464 Serine hydroxymethyltransferase NKI27_RS16455 PF12848 ABC transporter NKI27_RS16455 PF00005 ABC transporter NKI27_RS16460 PF07238 PilZ domain NKI27_RS16465 PF18073 Rubredoxin metal binding domain NKI27_RS16470 PF01053 Cys/Met metabolism PLP-dependent enzyme NKI27_RS16475 PF01208 Uroporphyrinogen decarboxylase (URO-D) NKI27_RS16480 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NKI27_RS16480 PF07992 Pyridine nucleotide-disulphide oxidoreductase NKI27_RS16485 PF00310 Glutamine amidotransferases class-II NKI27_RS16485 PF04898 Glutamate synthase central domain NKI27_RS16485 PF01645 Conserved region in glutamate synthase NKI27_RS16485 PF01493 GXGXG motif NKI27_RS16495 PF01761 3-dehydroquinate synthase NKI27_RS16500 PF01202 Shikimate kinase NKI27_RS16510 PF11741 AMIN domain NKI27_RS16510 PF00263 Bacterial type II and III secretion system protein NKI27_RS16510 PF03958 Bacterial type II/III secretion system short domain NKI27_RS16510 PF07660 Secretin and TonB N terminus short domain NKI27_RS16515 PF04351 Pilus assembly protein, PilP NKI27_RS16520 PF04350 Pilus assembly protein, PilO NKI27_RS16525 PF05137 Fimbrial assembly protein (PilN) NKI27_RS16530 PF11104 Type IV pilus assembly protein PilM; NKI27_RS16535 PF17092 Penicillin-binding protein OB-like domain NKI27_RS16535 PF00912 Transglycosylase NKI27_RS16535 PF00905 Penicillin binding protein transpeptidase domain NKI27_RS16545 PF01323 DSBA-like thioredoxin domain NKI27_RS16550 PF00034 Cytochrome c NKI27_RS16555 PF01926 50S ribosome-binding GTPase NKI27_RS16565 PF00171 Aldehyde dehydrogenase family NKI27_RS16570 PF01467 Cytidylyltransferase-like NKI27_RS16575 PF00037 4Fe-4S binding domain NKI27_RS16600 PF01594 AI-2E family transporter NKI27_RS16605 PF17941 Polyphosphate kinase C-terminal domain 1 NKI27_RS16605 PF13090 Polyphosphate kinase C-terminal domain 2 NKI27_RS16605 PF13089 Polyphosphate kinase N-terminal domain NKI27_RS16605 PF02503 Polyphosphate kinase middle domain NKI27_RS16610 PF00490 Delta-aminolevulinic acid dehydratase NKI27_RS16635 PF08351 Domain of unknown function (DUF1726) NKI27_RS16635 PF13718 GNAT acetyltransferase 2 NKI27_RS16635 PF05127 Helicase NKI27_RS16635 PF17176 tRNA-binding domain NKI27_RS16645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS16645 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS16645 PF18158 Adaptive response protein AidB N-terminal domain NKI27_RS16650 PF13462 Thioredoxin NKI27_RS16675 PF00282 Pyridoxal-dependent decarboxylase conserved domain NKI27_RS16690 PF00563 EAL domain NKI27_RS16690 PF01590 GAF domain NKI27_RS16690 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS16690 PF00360 Phytochrome region NKI27_RS16695 PF01384 Phosphate transporter family NKI27_RS16700 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS16700 PF00072 Response regulator receiver domain NKI27_RS16705 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS16705 PF03707 Bacterial signalling protein N terminal repeat NKI27_RS16705 PF00563 EAL domain NKI27_RS16710 PF12706 Beta-lactamase superfamily domain NKI27_RS16730 PF07992 Pyridine nucleotide-disulphide oxidoreductase NKI27_RS16730 PF18113 Rubredoxin binding C-terminal domain NKI27_RS16735 PF00301 Rubredoxin NKI27_RS16740 PF04345 Chorismate lyase NKI27_RS16745 PF01040 UbiA prenyltransferase family NKI27_RS16750 PF00072 Response regulator receiver domain NKI27_RS16750 PF00486 Transcriptional regulatory protein, C terminal NKI27_RS16755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS16755 PF00989 PAS fold NKI27_RS16755 PF11808 Phosphate regulon sensor protein PhoR NKI27_RS16755 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS16765 PF03466 LysR substrate binding domain NKI27_RS16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS16770 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NKI27_RS16770 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NKI27_RS16775 PF00005 ABC transporter NKI27_RS16780 PF00072 Response regulator receiver domain NKI27_RS16795 PF00849 RNA pseudouridylate synthase NKI27_RS16820 PF00005 ABC transporter NKI27_RS16825 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS16830 PF02769 AIR synthase related protein, C-terminal domain NKI27_RS16830 PF00586 AIR synthase related protein, N-terminal domain NKI27_RS16835 PF00924 Mechanosensitive ion channel NKI27_RS16835 PF05552 Conserved TM helix NKI27_RS16845 PF01494 FAD binding domain NKI27_RS16850 PF01230 HIT domain NKI27_RS16865 PF01895 PhoU domain NKI27_RS16870 PF00005 ABC transporter NKI27_RS16875 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS16880 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS16885 PF12849 PBP superfamily domain NKI27_RS16895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NKI27_RS16900 PF03061 Thioesterase superfamily NKI27_RS16905 PF00999 Sodium/hydrogen exchanger family NKI27_RS16905 PF02080 TrkA-C domain NKI27_RS16905 PF02254 TrkA-N domain NKI27_RS16910 PF13545 Crp-like helix-turn-helix domain NKI27_RS16910 PF00027 Cyclic nucleotide-binding domain NKI27_RS16915 PF02566 OsmC-like protein NKI27_RS16920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NKI27_RS16925 PF02675 S-adenosylmethionine decarboxylase NKI27_RS16930 PF00485 Phosphoribulokinase / Uridine kinase family NKI27_RS16935 PF00563 EAL domain NKI27_RS16935 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS16935 PF08448 PAS fold NKI27_RS16945 PF00696 Amino acid kinase family NKI27_RS16945 PF00583 Acetyltransferase (GNAT) family NKI27_RS16950 PF01546 Peptidase family M20/M25/M40 NKI27_RS16950 PF07687 Peptidase dimerisation domain NKI27_RS16960 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS16965 PF00696 Amino acid kinase family NKI27_RS16970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NKI27_RS16970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NKI27_RS16970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NKI27_RS16970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NKI27_RS16975 PF00692 dUTPase NKI27_RS16980 PF04127 DNA / pantothenate metabolism flavoprotein NKI27_RS16980 PF02441 Flavoprotein NKI27_RS16985 PF04002 RadC-like JAB domain NKI27_RS16990 PF00830 Ribosomal L28 family NKI27_RS16995 PF00471 Ribosomal protein L33 NKI27_RS17000 PF03949 Malic enzyme, NAD binding domain NKI27_RS17000 PF00390 Malic enzyme, N-terminal domain NKI27_RS17010 PF01197 Ribosomal protein L31 NKI27_RS17015 PF00270 DEAD/DEAH box helicase NKI27_RS17015 PF00271 Helicase conserved C-terminal domain NKI27_RS17015 PF17764 3′ DNA-binding domain (3′BD) NKI27_RS17015 PF18074 Primosomal protein N C-terminal domain NKI27_RS17015 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NKI27_RS17020 PF03485 Arginyl tRNA synthetase N terminal domain NKI27_RS17020 PF05746 DALR anticodon binding domain NKI27_RS17020 PF00750 tRNA synthetases class I (R) NKI27_RS17030 PF00227 Proteasome subunit NKI27_RS17035 PF10431 C-terminal, D2-small domain, of ClpB protein NKI27_RS17035 PF00004 ATPase family associated with various cellular activities (AAA) NKI27_RS17035 PF07724 AAA domain (Cdc48 subfamily) NKI27_RS17050 PF00391 PEP-utilising enzyme, mobile domain NKI27_RS17050 PF02896 PEP-utilising enzyme, TIM barrel domain NKI27_RS17050 PF05524 PEP-utilising enzyme, N-terminal NKI27_RS17050 PF01590 GAF domain NKI27_RS17055 PF00293 NUDIX domain NKI27_RS17070 PF17785 PUA-like domain NKI27_RS17070 PF10672 S-adenosylmethionine-dependent methyltransferase NKI27_RS17075 PF02347 Glycine cleavage system P-protein NKI27_RS17080 PF02347 Glycine cleavage system P-protein NKI27_RS17085 PF01597 Glycine cleavage H-protein NKI27_RS17090 PF08669 Glycine cleavage T-protein C-terminal barrel domain NKI27_RS17090 PF01571 Aminomethyltransferase folate-binding domain NKI27_RS17095 PF05728 Uncharacterised protein family (UPF0227) NKI27_RS17100 PF00149 Calcineurin-like phosphoesterase NKI27_RS17110 PF00293 NUDIX domain NKI27_RS17115 PF13667 ThiC-associated domain NKI27_RS17115 PF01964 Radical SAM ThiC family NKI27_RS17120 PF02321 Outer membrane efflux protein NKI27_RS17125 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NKI27_RS17155 PF00534 Glycosyl transferases group 1 NKI27_RS17155 PF13439 Glycosyltransferase Family 4 NKI27_RS17160 PF00534 Glycosyl transferases group 1 NKI27_RS17160 PF13439 Glycosyltransferase Family 4 NKI27_RS17170 PF08335 GlnD PII-uridylyltransferase NKI27_RS17170 PF03710 Glutamate-ammonia ligase adenylyltransferase NKI27_RS17205 PF01928 CYTH domain NKI27_RS17210 PF13609 Gram-negative porin NKI27_RS17215 PF02580 D-Tyr-tRNA(Tyr) deacylase NKI27_RS17220 PF00561 alpha/beta hydrolase fold NKI27_RS17225 PF00679 Elongation factor G C-terminus NKI27_RS17225 PF00009 Elongation factor Tu GTP binding domain NKI27_RS17225 PF03144 Elongation factor Tu domain 2 NKI27_RS17230 PF00120 Glutamine synthetase, catalytic domain NKI27_RS17230 PF03951 Glutamine synthetase, beta-Grasp domain NKI27_RS17240 PF00989 PAS fold NKI27_RS17240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS17240 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS17245 PF00158 Sigma-54 interaction domain NKI27_RS17245 PF02954 Bacterial regulatory protein, Fis family NKI27_RS17245 PF00072 Response regulator receiver domain NKI27_RS17280 PF07963 Prokaryotic N-terminal methylation motif NKI27_RS17290 PF00482 Type II secretion system (T2SS), protein F NKI27_RS17295 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NKI27_RS17295 PF00437 Type II/IV secretion system protein NKI27_RS17305 PF13401 AAA domain NKI27_RS17305 PF01471 Putative peptidoglycan binding domain NKI27_RS17310 PF00263 Bacterial type II and III secretion system protein NKI27_RS17310 PF03958 Bacterial type II/III secretion system short domain NKI27_RS17340 PF00583 Acetyltransferase (GNAT) family NKI27_RS17345 PF00202 Aminotransferase class-III NKI27_RS17355 PF06339 Ectoine synthase NKI27_RS17360 PF00696 Amino acid kinase family NKI27_RS17360 PF13840 ACT domain NKI27_RS17370 PF04055 Radical SAM superfamily NKI27_RS17375 PF01228 Glycine radical NKI27_RS17375 PF02901 Pyruvate formate lyase-like NKI27_RS17380 PF01228 Glycine radical NKI27_RS17380 PF02901 Pyruvate formate lyase-like NKI27_RS17390 PF12833 Helix-turn-helix domain NKI27_RS17395 PF00436 Single-strand binding protein family NKI27_RS17400 PF07690 Major Facilitator Superfamily NKI27_RS17405 PF17755 UvrA DNA-binding domain NKI27_RS17405 PF17760 UvrA interaction domain NKI27_RS17410 PF01196 Ribosomal protein L17 NKI27_RS17415 PF01000 RNA polymerase Rpb3/RpoA insert domain NKI27_RS17415 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NKI27_RS17415 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NKI27_RS17420 PF00163 Ribosomal protein S4/S9 N-terminal domain NKI27_RS17420 PF01479 S4 domain NKI27_RS17425 PF00411 Ribosomal protein S11 NKI27_RS17430 PF00416 Ribosomal protein S13/S18 NKI27_RS17435 PF00444 Ribosomal protein L36 NKI27_RS17440 PF00344 SecY translocase NKI27_RS17445 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NKI27_RS17450 PF00327 Ribosomal protein L30p/L7e NKI27_RS17455 PF03719 Ribosomal protein S5, C-terminal domain NKI27_RS17455 PF00333 Ribosomal protein S5, N-terminal domain NKI27_RS17460 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NKI27_RS17465 PF00347 Ribosomal protein L6 NKI27_RS17470 PF00410 Ribosomal protein S8 NKI27_RS17475 PF00253 Ribosomal protein S14p/S29e NKI27_RS17480 PF00281 Ribosomal protein L5 NKI27_RS17480 PF00673 ribosomal L5P family C-terminus NKI27_RS17485 PF00467 KOW motif NKI27_RS17485 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NKI27_RS17490 PF00238 Ribosomal protein L14p/L23e NKI27_RS17495 PF00366 Ribosomal protein S17 NKI27_RS17500 PF00831 Ribosomal L29 protein NKI27_RS17505 PF00252 Ribosomal protein L16p/L10e NKI27_RS17510 PF07650 KH domain NKI27_RS17510 PF00189 Ribosomal protein S3, C-terminal domain NKI27_RS17515 PF00237 Ribosomal protein L22p/L17e NKI27_RS17520 PF00203 Ribosomal protein S19 NKI27_RS17525 PF00181 Ribosomal Proteins L2, RNA binding domain NKI27_RS17525 PF03947 Ribosomal Proteins L2, C-terminal domain NKI27_RS17530 PF00276 Ribosomal protein L23 NKI27_RS17535 PF00573 Ribosomal protein L4/L1 family NKI27_RS17540 PF00297 Ribosomal protein L3 NKI27_RS17545 PF00338 Ribosomal protein S10p/S20e NKI27_RS17550 PF00009 Elongation factor Tu GTP binding domain NKI27_RS17550 PF03144 Elongation factor Tu domain 2 NKI27_RS17550 PF03143 Elongation factor Tu C-terminal domain NKI27_RS17555 PF00679 Elongation factor G C-terminus NKI27_RS17555 PF14492 Elongation Factor G, domain II NKI27_RS17555 PF03764 Elongation factor G, domain IV NKI27_RS17555 PF03144 Elongation factor Tu domain 2 NKI27_RS17555 PF00009 Elongation factor Tu GTP binding domain NKI27_RS17560 PF00177 Ribosomal protein S7p/S5e NKI27_RS17565 PF00164 Ribosomal protein S12/S23 NKI27_RS17570 PF04997 RNA polymerase Rpb1, domain 1 NKI27_RS17570 PF00623 RNA polymerase Rpb1, domain 2 NKI27_RS17570 PF05000 RNA polymerase Rpb1, domain 4 NKI27_RS17570 PF04998 RNA polymerase Rpb1, domain 5 NKI27_RS17570 PF04983 RNA polymerase Rpb1, domain 3 NKI27_RS17575 PF10385 RNA polymerase beta subunit external 1 domain NKI27_RS17575 PF04563 RNA polymerase beta subunit NKI27_RS17575 PF04561 RNA polymerase Rpb2, domain 2 NKI27_RS17575 PF04565 RNA polymerase Rpb2, domain 3 NKI27_RS17575 PF00562 RNA polymerase Rpb2, domain 6 NKI27_RS17575 PF04560 RNA polymerase Rpb2, domain 7 NKI27_RS17580 PF00542 Ribosomal protein L7/L12 C-terminal domain NKI27_RS17580 PF16320 Ribosomal protein L7/L12 dimerisation domain NKI27_RS17585 PF00466 Ribosomal protein L10 NKI27_RS17590 PF00687 Ribosomal protein L1p/L10e family NKI27_RS17595 PF00298 Ribosomal protein L11, RNA binding domain NKI27_RS17595 PF03946 Ribosomal protein L11, N-terminal domain NKI27_RS17600 PF00467 KOW motif NKI27_RS17600 PF02357 Transcription termination factor nusG NKI27_RS17605 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NKI27_RS17640 PF03309 Type III pantothenate kinase NKI27_RS17645 PF02237 Biotin protein ligase C terminal domain NKI27_RS17645 PF08279 HTH domain NKI27_RS17645 PF03099 Biotin/lipoate A/B protein ligase family NKI27_RS17695 PF00579 tRNA synthetases class I (W and Y) NKI27_RS17700 PF01551 Peptidase family M23 NKI27_RS17700 PF04225 Opacity-associated protein A LysM-like domain NKI27_RS17705 PF03702 Anhydro-N-acetylmuramic acid kinase NKI27_RS17710 PF01521 Iron-sulphur cluster biosynthesis NKI27_RS17725 PF01118 Semialdehyde dehydrogenase, NAD binding domain NKI27_RS17725 PF02774 Semialdehyde dehydrogenase, dimerisation domain NKI27_RS17735 PF03653 Uncharacterised protein family (UPF0093) NKI27_RS17740 PF08543 Phosphomethylpyrimidine kinase NKI27_RS17740 PF02581 Thiamine monophosphate synthase NKI27_RS17745 PF02581 Thiamine monophosphate synthase NKI27_RS17750 PF00202 Aminotransferase class-III NKI27_RS17760 PF00905 Penicillin binding protein transpeptidase domain NKI27_RS17760 PF00912 Transglycosylase NKI27_RS17760 PF14814 Bifunctional transglycosylase second domain NKI27_RS17770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS17770 PF00072 Response regulator receiver domain NKI27_RS17790 PF17746 SfsA N-terminal OB domain NKI27_RS17790 PF03749 Sugar fermentation stimulation protein RE domain NKI27_RS17795 PF01258 Prokaryotic dksA/traR C4-type zinc finger NKI27_RS17800 PF00749 tRNA synthetases class I (E and Q), catalytic domain NKI27_RS17805 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS17805 PF08447 PAS fold NKI27_RS17805 PF00989 PAS fold NKI27_RS17805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS17810 PF02954 Bacterial regulatory protein, Fis family NKI27_RS17810 PF00072 Response regulator receiver domain NKI27_RS17810 PF00158 Sigma-54 interaction domain NKI27_RS17815 PF01743 Poly A polymerase head domain NKI27_RS17815 PF12626 Polymerase A arginine-rich C-terminus NKI27_RS17815 PF12627 Probable RNA and SrmB- binding site of polymerase A NKI27_RS17820 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NKI27_RS17825 PF02548 Ketopantoate hydroxymethyltransferase NKI27_RS17830 PF02569 Pantoate-beta-alanine ligase NKI27_RS17835 PF00342 Phosphoglucose isomerase NKI27_RS17840 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NKI27_RS17845 PF02152 Dihydroneopterin aldolase NKI27_RS17850 PF02660 Glycerol-3-phosphate acyltransferase NKI27_RS17855 PF00814 Glycoprotease family NKI27_RS17860 PF01165 Ribosomal protein S21 NKI27_RS17865 PF09424 Yqey-like protein NKI27_RS17870 PF08278 DNA primase DnaG DnaB-binding NKI27_RS17870 PF13662 Toprim domain NKI27_RS17870 PF01807 CHC2 zinc finger NKI27_RS17870 PF08275 DNA primase catalytic core, N-terminal domain NKI27_RS17870 PF10410 DnaB-helicase binding domain of primase NKI27_RS17875 PF04545 Sigma-70, region 4 NKI27_RS17875 PF04539 Sigma-70 region 3 NKI27_RS17875 PF04542 Sigma-70 region 2 NKI27_RS17875 PF03979 Sigma-70 factor, region 1.1 NKI27_RS17875 PF04546 Sigma-70, non-essential region NKI27_RS17875 PF00140 Sigma-70 factor, region 1.2 NKI27_RS17920 PF04116 Fatty acid hydroxylase superfamily NKI27_RS17930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NKI27_RS17930 PF00672 HAMP domain NKI27_RS17945 PF01593 Flavin containing amine oxidoreductase NKI27_RS17975 PF00270 DEAD/DEAH box helicase NKI27_RS17975 PF00271 Helicase conserved C-terminal domain NKI27_RS17975 PF17191 RecG wedge domain NKI27_RS17980 PF03466 LysR substrate binding domain NKI27_RS17980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS17990 PF01042 Endoribonuclease L-PSP NKI27_RS17995 PF13291 ACT domain NKI27_RS17995 PF02824 TGS domain NKI27_RS17995 PF04607 Region found in RelA / SpoT proteins NKI27_RS18005 PF00625 Guanylate kinase NKI27_RS18010 PF01266 FAD dependent oxidoreductase NKI27_RS18015 PF08340 Domain of unknown function (DUF1732) NKI27_RS18015 PF03755 YicC-like family, N-terminal region NKI27_RS18020 PF01138 3' exoribonuclease family, domain 1 NKI27_RS18020 PF03725 3' exoribonuclease family, domain 2 NKI27_RS18045 PF02321 Outer membrane efflux protein NKI27_RS18050 PF00664 ABC transporter transmembrane region NKI27_RS18050 PF00005 ABC transporter NKI27_RS18050 PF03412 Peptidase C39 family NKI27_RS18055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NKI27_RS18055 PF00529 HlyD membrane-fusion protein of T1SS NKI27_RS18090 PF00196 Bacterial regulatory proteins, luxR family NKI27_RS18090 PF03472 Autoinducer binding domain NKI27_RS18095 PF05193 Peptidase M16 inactive domain NKI27_RS18095 PF00675 Insulinase (Peptidase family M16) NKI27_RS18105 PF00156 Phosphoribosyl transferase domain NKI27_RS18125 PF01136 Peptidase family U32 NKI27_RS18125 PF16325 Peptidase family U32 C-terminal domain NKI27_RS18130 PF01636 Phosphotransferase enzyme family NKI27_RS18140 PF01367 5'-3' exonuclease, C-terminal SAM fold NKI27_RS18140 PF01612 3'-5' exonuclease NKI27_RS18140 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NKI27_RS18140 PF00476 DNA polymerase family A NKI27_RS18145 PF00437 Type II/IV secretion system protein NKI27_RS18150 PF00437 Type II/IV secretion system protein NKI27_RS18155 PF01168 Alanine racemase, N-terminal domain NKI27_RS18160 PF03807 NADP oxidoreductase coenzyme F420-dependent NKI27_RS18160 PF14748 Pyrroline-5-carboxylate reductase dimerisation NKI27_RS18165 PF02325 YGGT family NKI27_RS18170 PF00350 Dynamin family NKI27_RS18175 PF00561 alpha/beta hydrolase fold NKI27_RS18180 PF00561 alpha/beta hydrolase fold NKI27_RS18180 PF07021 Methionine biosynthesis protein MetW NKI27_RS18190 PF01725 Ham1 family NKI27_RS18195 PF04055 Radical SAM superfamily NKI27_RS18195 PF06969 HemN C-terminal domain NKI27_RS18200 PF00072 Response regulator receiver domain NKI27_RS18200 PF02954 Bacterial regulatory protein, Fis family NKI27_RS18200 PF00158 Sigma-54 interaction domain NKI27_RS18205 PF02390 Putative methyltransferase NKI27_RS18210 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NKI27_RS18215 PF01078 Magnesium chelatase, subunit ChlI NKI27_RS18215 PF13335 Magnesium chelatase, subunit ChlI C-terminal NKI27_RS18220 PF04380 Membrane fusogenic activity NKI27_RS18225 PF00543 Nitrogen regulatory protein P-II NKI27_RS18230 PF00909 Ammonium Transporter Family NKI27_RS18235 PF17284 Spermidine synthase tetramerisation domain NKI27_RS18240 PF17944 Arginine decarboxylase C-terminal helical extension NKI27_RS18240 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NKI27_RS18240 PF17810 Arginine decarboxylase helical bundle domain NKI27_RS18245 PF17171 Glutathione S-transferase, C-terminal domain NKI27_RS18245 PF17172 Glutathione S-transferase N-terminal domain NKI27_RS18250 PF12833 Helix-turn-helix domain NKI27_RS18250 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NKI27_RS18260 PF02277 Phosphoribosyltransferase NKI27_RS18265 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NKI27_RS18270 PF00266 Aminotransferase class-V NKI27_RS18275 PF03170 Bacterial cellulose synthase subunit NKI27_RS18275 PF07238 PilZ domain NKI27_RS18275 PF00535 Glycosyl transferase family 2 NKI27_RS18280 PF02770 Acyl-CoA dehydrogenase, middle domain NKI27_RS18280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NKI27_RS18280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NKI27_RS18280 PF12806 Acetyl-CoA dehydrogenase C-terminal like NKI27_RS18290 PF00899 ThiF family NKI27_RS18305 PF08240 Alcohol dehydrogenase GroES-like domain NKI27_RS18305 PF00107 Zinc-binding dehydrogenase NKI27_RS18320 PF00497 Bacterial extracellular solute-binding proteins, family 3 NKI27_RS18325 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS18330 PF00528 Binding-protein-dependent transport system inner membrane component NKI27_RS18335 PF00005 ABC transporter NKI27_RS18370 PF00571 CBS domain NKI27_RS18380 PF12697 Alpha/beta hydrolase family NKI27_RS18390 PF09997 Predicted membrane protein (DUF2238) NKI27_RS18400 PF00313 'Cold-shock' DNA-binding domain NKI27_RS18405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NKI27_RS18410 PF00753 Metallo-beta-lactamase superfamily NKI27_RS18415 PF06865 Pyrimidine/purine nucleoside phosphorylase NKI27_RS18430 PF03880 DbpA RNA binding domain NKI27_RS18430 PF00270 DEAD/DEAH box helicase NKI27_RS18430 PF00271 Helicase conserved C-terminal domain NKI27_RS18435 PF00313 'Cold-shock' DNA-binding domain NKI27_RS18440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NKI27_RS18445 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NKI27_RS18455 PF00994 Probable molybdopterin binding domain NKI27_RS18455 PF02464 Competence-damaged protein NKI27_RS18495 PF00378 Enoyl-CoA hydratase/isomerase NKI27_RS18500 PF06794 Uncharacterised protein family (UPF0270) NKI27_RS18505 PF00106 short chain dehydrogenase NKI27_RS18535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NKI27_RS18535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NKI27_RS18535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NKI27_RS18535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NKI27_RS18540 PF00271 Helicase conserved C-terminal domain NKI27_RS18540 PF12137 RNA polymerase recycling family C-terminal NKI27_RS18540 PF00176 SNF2 family N-terminal domain NKI27_RS18540 PF18339 RapA N-terminal Tudor like domain 1 NKI27_RS18540 PF18337 RapA N-terminal Tudor like domain NKI27_RS18550 PF00072 Response regulator receiver domain NKI27_RS18550 PF01627 Hpt domain NKI27_RS18550 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS18550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS18550 PF00672 HAMP domain NKI27_RS18550 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NKI27_RS18555 PF01627 Hpt domain NKI27_RS18555 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS18555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS18555 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NKI27_RS18555 PF00672 HAMP domain NKI27_RS18555 PF00072 Response regulator receiver domain NKI27_RS18565 PF00581 Rhodanese-like domain NKI27_RS18570 PF07152 YaeQ protein NKI27_RS18595 PF01925 Sulfite exporter TauE/SafE NKI27_RS18600 PF01641 SelR domain NKI27_RS18600 PF01625 Peptide methionine sulfoxide reductase NKI27_RS18605 PF06779 Uncharacterised MFS-type transporter YbfB NKI27_RS18610 PF01361 Tautomerase enzyme NKI27_RS18625 PF00593 TonB dependent receptor NKI27_RS18625 PF07715 TonB-dependent Receptor Plug Domain NKI27_RS18630 PF01205 Uncharacterized protein family UPF0029 NKI27_RS18630 PF09186 Domain of unknown function (DUF1949) NKI27_RS18635 PF01464 Transglycosylase SLT domain NKI27_RS18645 PF00672 HAMP domain NKI27_RS18645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS18645 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS18645 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB NKI27_RS18645 PF08448 PAS fold NKI27_RS18650 PF00990 Diguanylate cyclase, GGDEF domain NKI27_RS18655 PF02954 Bacterial regulatory protein, Fis family NKI27_RS18655 PF00072 Response regulator receiver domain NKI27_RS18655 PF00158 Sigma-54 interaction domain NKI27_RS18670 PF07715 TonB-dependent Receptor Plug Domain NKI27_RS18670 PF00593 TonB dependent receptor NKI27_RS18675 PF00072 Response regulator receiver domain NKI27_RS18675 PF00196 Bacterial regulatory proteins, luxR family NKI27_RS18680 PF00672 HAMP domain NKI27_RS18680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS18680 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS18685 PF03280 Proteobacterial lipase chaperone protein NKI27_RS18690 PF00561 alpha/beta hydrolase fold NKI27_RS18695 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NKI27_RS18695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NKI27_RS18720 PF12843 Putative quorum-sensing-regulated virulence factor NKI27_RS18725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NKI27_RS18730 PF04304 Protein of unknown function (DUF454) NKI27_RS18735 PF01743 Poly A polymerase head domain NKI27_RS18735 PF12627 Probable RNA and SrmB- binding site of polymerase A NKI27_RS18735 PF02272 DHHA1 domain NKI27_RS18735 PF01368 DHH family NKI27_RS18735 PF00571 CBS domain NKI27_RS18745 PF00106 short chain dehydrogenase NKI27_RS18760 PF01926 50S ribosome-binding GTPase NKI27_RS18765 PF05661 Protein of unknown function (DUF808) NKI27_RS18775 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal NKI27_RS18775 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal NKI27_RS18785 PF01037 Lrp/AsnC ligand binding domain NKI27_RS18790 PF08502 LeuA allosteric (dimerisation) domain NKI27_RS18790 PF00682 HMGL-like NKI27_RS18805 PF02230 Phospholipase/Carboxylesterase NKI27_RS18815 PF06039 Malate:quinone oxidoreductase (Mqo) NKI27_RS18825 PF01425 Amidase NKI27_RS18850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NKI27_RS18850 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NKI27_RS18875 PF01336 OB-fold nucleic acid binding domain NKI27_RS18875 PF00152 tRNA synthetases class II (D, K and N) NKI27_RS18880 PF01627 Hpt domain NKI27_RS18880 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS18880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS18880 PF00672 HAMP domain NKI27_RS18880 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NKI27_RS18880 PF00072 Response regulator receiver domain NKI27_RS18885 PF00270 DEAD/DEAH box helicase NKI27_RS18885 PF00271 Helicase conserved C-terminal domain NKI27_RS18900 PF13193 AMP-binding enzyme C-terminal domain NKI27_RS18900 PF00501 AMP-binding enzyme NKI27_RS18905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NKI27_RS18905 PF00672 HAMP domain NKI27_RS18905 PF02743 Cache domain NKI27_RS18915 PF00579 tRNA synthetases class I (W and Y) NKI27_RS18925 PF01546 Peptidase family M20/M25/M40 NKI27_RS18925 PF07687 Peptidase dimerisation domain NKI27_RS18930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NKI27_RS18930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NKI27_RS18930 PF00205 Thiamine pyrophosphate enzyme, central domain NKI27_RS18945 PF02253 Phospholipase A1 NKI27_RS18970 PF06508 Queuosine biosynthesis protein QueC NKI27_RS18990 PF00072 Response regulator receiver domain NKI27_RS19000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS19000 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS19000 PF09308 LuxQ, periplasmic NKI27_RS19000 PF00072 Response regulator receiver domain NKI27_RS19015 PF00144 Beta-lactamase NKI27_RS19025 PF13581 Histidine kinase-like ATPase domain NKI27_RS19025 PF13426 PAS domain NKI27_RS19025 PF07568 Histidine kinase NKI27_RS19030 PF01040 UbiA prenyltransferase family NKI27_RS19035 PF02628 Cytochrome oxidase assembly protein NKI27_RS19055 PF00510 Cytochrome c oxidase subunit III NKI27_RS19060 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NKI27_RS19065 PF00115 Cytochrome C and Quinol oxidase polypeptide I NKI27_RS19070 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NKI27_RS19070 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NKI27_RS19075 PF01554 MatE NKI27_RS19090 PF01432 Peptidase family M3 NKI27_RS19095 PF00132 Bacterial transferase hexapeptide (six repeats) NKI27_RS19105 PF00691 OmpA family NKI27_RS19105 PF13677 Membrane MotB of proton-channel complex MotA/MotB NKI27_RS19110 PF01618 MotA/TolQ/ExbB proton channel family NKI27_RS19115 PF08501 Shikimate dehydrogenase substrate binding domain NKI27_RS19115 PF01488 Shikimate / quinate 5-dehydrogenase NKI27_RS19115 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NKI27_RS19120 PF01218 Coproporphyrinogen III oxidase NKI27_RS19125 PF01300 Telomere recombination NKI27_RS19130 PF17782 DprA winged helix domain NKI27_RS19130 PF02481 DNA recombination-mediator protein A NKI27_RS19140 PF01327 Polypeptide deformylase NKI27_RS19145 PF00551 Formyl transferase NKI27_RS19145 PF02911 Formyl transferase, C-terminal domain NKI27_RS19150 PF01029 NusB family NKI27_RS19150 PF01189 16S rRNA methyltransferase RsmB/F NKI27_RS19155 PF02080 TrkA-C domain NKI27_RS19155 PF02254 TrkA-N domain NKI27_RS19160 PF02386 Cation transport protein NKI27_RS19175 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ NKI27_RS19180 PF02091 Glycyl-tRNA synthetase alpha subunit NKI27_RS19185 PF02092 Glycyl-tRNA synthetase beta subunit NKI27_RS19185 PF05746 DALR anticodon binding domain NKI27_RS19190 PF03279 Bacterial lipid A biosynthesis acyltransferase NKI27_RS19195 PF09339 IclR helix-turn-helix domain NKI27_RS19195 PF01614 Bacterial transcriptional regulator NKI27_RS19200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NKI27_RS19200 PF00529 HlyD membrane-fusion protein of T1SS NKI27_RS19205 PF00873 AcrB/AcrD/AcrF family NKI27_RS19210 PF17876 Cold shock domain NKI27_RS19210 PF08461 Ribonuclease R winged-helix domain NKI27_RS19210 PF08206 Ribonuclease B OB domain NKI27_RS19210 PF00773 RNB domain NKI27_RS19210 PF00575 S1 RNA binding domain NKI27_RS19215 PF00313 'Cold-shock' DNA-binding domain NKI27_RS19220 PF00582 Universal stress protein family NKI27_RS19225 PF00582 Universal stress protein family NKI27_RS19230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS19230 PF00512 His Kinase A (phospho-acceptor) domain NKI27_RS19235 PF00072 Response regulator receiver domain NKI27_RS19235 PF00486 Transcriptional regulatory protein, C terminal NKI27_RS19240 PF00970 Oxidoreductase FAD-binding domain NKI27_RS19240 PF00111 2Fe-2S iron-sulfur cluster binding domain NKI27_RS19240 PF00175 Oxidoreductase NAD-binding domain NKI27_RS19270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NKI27_RS19270 PF01751 Toprim domain NKI27_RS19270 PF18053 DNA gyrase B subunit insert domain NKI27_RS19270 PF00204 DNA gyrase B NKI27_RS19270 PF00986 DNA gyrase B subunit, carboxyl terminus NKI27_RS19275 PF02463 RecF/RecN/SMC N terminal domain NKI27_RS19285 PF03109 ABC1 family NKI27_RS19290 PF00712 DNA polymerase III beta subunit, N-terminal domain NKI27_RS19290 PF02767 DNA polymerase III beta subunit, central domain NKI27_RS19290 PF02768 DNA polymerase III beta subunit, C-terminal domain NKI27_RS19295 PF11638 DnaA N-terminal domain NKI27_RS19295 PF00308 Bacterial dnaA protein NKI27_RS19295 PF08299 Bacterial dnaA protein helix-turn-helix NKI27_RS19300 PF00468 Ribosomal protein L34 NKI27_RS19305 PF00825 Ribonuclease P NKI27_RS19310 PF01809 Putative membrane protein insertion efficiency factor