locus-tag class description CLOS_RS00015 PF00308 Bacterial dnaA protein CLOS_RS00015 PF11638 DnaA N-terminal domain CLOS_RS00015 PF08299 Bacterial dnaA protein helix-turn-helix CLOS_RS00020 PF02768 DNA polymerase III beta subunit, C-terminal domain CLOS_RS00020 PF02767 DNA polymerase III beta subunit, central domain CLOS_RS00020 PF00712 DNA polymerase III beta subunit, N-terminal domain CLOS_RS00030 PF02463 RecF/RecN/SMC N terminal domain CLOS_RS00035 PF04025 Domain of unknown function (DUF370) CLOS_RS00040 PF00204 DNA gyrase B CLOS_RS00040 PF00986 DNA gyrase B subunit, carboxyl terminus CLOS_RS00040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS00040 PF01751 Toprim domain CLOS_RS00045 PF03989 DNA gyrase C-terminal domain, beta-propeller CLOS_RS00045 PF00521 DNA gyrase/topoisomerase IV, subunit A CLOS_RS00050 PF01740 STAS domain CLOS_RS00055 PF13581 Histidine kinase-like ATPase domain CLOS_RS00060 PF04542 Sigma-70 region 2 CLOS_RS00060 PF04539 Sigma-70 region 3 CLOS_RS00060 PF04545 Sigma-70, region 4 CLOS_RS00080 PF08279 HTH domain CLOS_RS00080 PF02829 3H domain CLOS_RS00095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLOS_RS00095 PF02403 Seryl-tRNA synthetase N-terminal domain CLOS_RS00115 PF14437 MafB19-like deaminase CLOS_RS00125 PF03099 Biotin/lipoate A/B protein ligase family CLOS_RS00125 PF10437 Bacterial lipoate protein ligase C-terminus CLOS_RS00140 PF01206 Sulfurtransferase TusA CLOS_RS00155 PF00155 Aminotransferase class I and II CLOS_RS00160 PF00989 PAS fold CLOS_RS00160 PF02954 Bacterial regulatory protein, Fis family CLOS_RS00160 PF00158 Sigma-54 interaction domain CLOS_RS00165 PF13375 RnfC Barrel sandwich hybrid domain CLOS_RS00165 PF10531 SLBB domain CLOS_RS00165 PF13237 4Fe-4S dicluster domain CLOS_RS00165 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLOS_RS00170 PF09338 Glycine/sarcosine/betaine reductase component B subunits CLOS_RS00180 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) CLOS_RS00185 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) CLOS_RS00190 PF09338 Glycine/sarcosine/betaine reductase component B subunits CLOS_RS00195 PF09338 Glycine/sarcosine/betaine reductase component B subunits CLOS_RS00200 PF05544 Proline racemase CLOS_RS00210 PF01250 Ribosomal protein S6 CLOS_RS00215 PF00436 Single-strand binding protein family CLOS_RS00220 PF01084 Ribosomal protein S18 CLOS_RS00225 PF00005 ABC transporter CLOS_RS00230 PF00005 ABC transporter CLOS_RS00240 PF04397 LytTr DNA-binding domain CLOS_RS00240 PF00072 Response regulator receiver domain CLOS_RS00245 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CLOS_RS00245 PF01488 Shikimate / quinate 5-dehydrogenase CLOS_RS00245 PF08501 Shikimate dehydrogenase substrate binding domain CLOS_RS00255 PF14693 Ribosomal protein TL5, C-terminal domain CLOS_RS00255 PF01386 Ribosomal L25p family CLOS_RS00260 PF14693 Ribosomal protein TL5, C-terminal domain CLOS_RS00260 PF01386 Ribosomal L25p family CLOS_RS00295 PF02954 Bacterial regulatory protein, Fis family CLOS_RS00295 PF13426 PAS domain CLOS_RS00295 PF00158 Sigma-54 interaction domain CLOS_RS00340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS00340 PF00672 HAMP domain CLOS_RS00340 PF02743 Cache domain CLOS_RS00345 PF02583 Metal-sensitive transcriptional repressor CLOS_RS00350 PF00403 Heavy-metal-associated domain CLOS_RS00360 PF12833 Helix-turn-helix domain CLOS_RS00360 PF02311 AraC-like ligand binding domain CLOS_RS00365 PF02618 YceG-like family CLOS_RS00385 PF01276 Orn/Lys/Arg decarboxylase, major domain CLOS_RS00385 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLOS_RS00390 PF02223 Thymidylate kinase CLOS_RS00395 PF06153 Cyclic-di-AMP receptor CLOS_RS00400 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CLOS_RS00400 PF12170 DNA polymerase III tau subunit V interacting with alpha CLOS_RS00400 PF12169 DNA polymerase III subunits gamma and tau domain III CLOS_RS00405 PF04468 PSP1 C-terminal conserved region CLOS_RS00410 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLOS_RS00410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLOS_RS00415 PF08669 Glycine cleavage T-protein C-terminal barrel domain CLOS_RS00415 PF01571 Aminomethyltransferase folate-binding domain CLOS_RS00420 PF01597 Glycine cleavage H-protein CLOS_RS00425 PF02347 Glycine cleavage system P-protein CLOS_RS00430 PF02347 Glycine cleavage system P-protein CLOS_RS00435 PF00158 Sigma-54 interaction domain CLOS_RS00435 PF02954 Bacterial regulatory protein, Fis family CLOS_RS00435 PF13426 PAS domain CLOS_RS00445 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLOS_RS00450 PF00871 Acetokinase family CLOS_RS00455 PF00155 Aminotransferase class I and II CLOS_RS00470 PF00398 Ribosomal RNA adenine dimethylase CLOS_RS00485 PF02219 Methylenetetrahydrofolate reductase CLOS_RS00495 PF00809 Pterin binding enzyme CLOS_RS00495 PF02607 B12 binding domain CLOS_RS00495 PF02310 B12 binding domain CLOS_RS00495 PF02574 Homocysteine S-methyltransferase CLOS_RS00495 PF02965 Vitamin B12 dependent methionine synthase, activation domain CLOS_RS00505 PF03551 Transcriptional regulator PadR-like family CLOS_RS00515 PF00108 Thiolase, N-terminal domain CLOS_RS00515 PF02803 Thiolase, C-terminal domain CLOS_RS00520 PF00989 PAS fold CLOS_RS00520 PF00158 Sigma-54 interaction domain CLOS_RS00520 PF02954 Bacterial regulatory protein, Fis family CLOS_RS00525 PF01144 Coenzyme A transferase CLOS_RS00535 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CLOS_RS00535 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CLOS_RS00545 PF01575 MaoC like domain CLOS_RS00550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CLOS_RS00550 PF02770 Acyl-CoA dehydrogenase, middle domain CLOS_RS00550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLOS_RS00555 PF01012 Electron transfer flavoprotein domain CLOS_RS00560 PF00766 Electron transfer flavoprotein FAD-binding domain CLOS_RS00560 PF01012 Electron transfer flavoprotein domain CLOS_RS00570 PF00072 Response regulator receiver domain CLOS_RS00570 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS00575 PF16736 Single Cache-like CLOS_RS00575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS00575 PF00989 PAS fold CLOS_RS00575 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS00595 PF12848 ABC transporter CLOS_RS00595 PF00005 ABC transporter CLOS_RS00645 PF03575 Peptidase family S51 CLOS_RS00685 PF13302 Acetyltransferase (GNAT) domain CLOS_RS00690 PF00072 Response regulator receiver domain CLOS_RS00690 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS00695 PF00005 ABC transporter CLOS_RS00705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS00705 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS00710 PF00005 ABC transporter CLOS_RS00710 PF09383 NIL domain CLOS_RS00715 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS00720 PF00171 Aldehyde dehydrogenase family CLOS_RS00725 PF00696 Amino acid kinase family CLOS_RS00730 PF14748 Pyrroline-5-carboxylate reductase dimerisation CLOS_RS00730 PF03807 NADP oxidoreductase coenzyme F420-dependent CLOS_RS00735 PF10502 Signal peptidase, peptidase S26 CLOS_RS00770 PF07724 AAA domain (Cdc48 subfamily) CLOS_RS00770 PF10431 C-terminal, D2-small domain, of ClpB protein CLOS_RS00770 PF02861 Clp amino terminal domain, pathogenicity island component CLOS_RS00770 PF17871 AAA lid domain CLOS_RS00770 PF00004 ATPase family associated with various cellular activities (AAA) CLOS_RS00780 PF00258 Flavodoxin CLOS_RS00780 PF00753 Metallo-beta-lactamase superfamily CLOS_RS00780 PF00301 Rubredoxin CLOS_RS00790 PF00005 ABC transporter CLOS_RS00795 PF12704 MacB-like periplasmic core domain CLOS_RS00795 PF02687 FtsX-like permease family CLOS_RS00810 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CLOS_RS00810 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLOS_RS00815 PF02805 Metal binding domain of Ada CLOS_RS00815 PF06029 AlkA N-terminal domain CLOS_RS00815 PF00730 HhH-GPD superfamily base excision DNA repair protein CLOS_RS00815 PF12833 Helix-turn-helix domain CLOS_RS00825 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLOS_RS00830 PF00005 ABC transporter CLOS_RS00850 PF00665 Integrase core domain CLOS_RS00850 PF13333 Integrase core domain CLOS_RS00865 PF05036 Sporulation related domain CLOS_RS00865 PF01520 N-acetylmuramoyl-L-alanine amidase CLOS_RS00905 PF08281 Sigma-70, region 4 CLOS_RS00905 PF04542 Sigma-70 region 2 CLOS_RS00915 PF00378 Enoyl-CoA hydratase/isomerase CLOS_RS00925 PF01144 Coenzyme A transferase CLOS_RS00930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLOS_RS00930 PF02770 Acyl-CoA dehydrogenase, middle domain CLOS_RS00930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CLOS_RS00935 PF01012 Electron transfer flavoprotein domain CLOS_RS00940 PF01012 Electron transfer flavoprotein domain CLOS_RS00940 PF00766 Electron transfer flavoprotein FAD-binding domain CLOS_RS00940 PF13237 4Fe-4S dicluster domain CLOS_RS00945 PF00158 Sigma-54 interaction domain CLOS_RS00945 PF00989 PAS fold CLOS_RS00945 PF02954 Bacterial regulatory protein, Fis family CLOS_RS00955 PF00355 Rieske [2Fe-2S] domain CLOS_RS00955 PF01266 FAD dependent oxidoreductase CLOS_RS00970 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CLOS_RS00970 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLOS_RS00975 PF01554 MatE CLOS_RS00980 PF04205 FMN-binding domain CLOS_RS00980 PF00890 FAD binding domain CLOS_RS00985 PF02743 Cache domain CLOS_RS00985 PF00672 HAMP domain CLOS_RS00985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS00985 PF06580 Histidine kinase CLOS_RS00990 PF00072 Response regulator receiver domain CLOS_RS00990 PF12833 Helix-turn-helix domain CLOS_RS01000 PF01476 LysM domain CLOS_RS01000 PF08525 Opacity-associated protein A N-terminal motif CLOS_RS01000 PF01551 Peptidase family M23 CLOS_RS01005 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLOS_RS01010 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS01015 PF00005 ABC transporter CLOS_RS01020 PF02743 Cache domain CLOS_RS01020 PF00672 HAMP domain CLOS_RS01020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS01025 PF00158 Sigma-54 interaction domain CLOS_RS01025 PF13426 PAS domain CLOS_RS01025 PF02954 Bacterial regulatory protein, Fis family CLOS_RS01030 PF01235 Sodium:alanine symporter family CLOS_RS01035 PF01546 Peptidase family M20/M25/M40 CLOS_RS01040 PF03591 AzlC protein CLOS_RS01045 PF05437 Branched-chain amino acid transport protein (AzlD) CLOS_RS01050 PF03424 Carbohydrate binding domain (family 17/28) CLOS_RS01050 PF00150 Cellulase (glycosyl hydrolase family 5) CLOS_RS01050 PF00395 S-layer homology domain CLOS_RS01060 PF01032 FecCD transport family CLOS_RS01065 PF00005 ABC transporter CLOS_RS01085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLOS_RS01085 PF04324 BFD-like [2Fe-2S] binding domain CLOS_RS01095 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS01095 PF08447 PAS fold CLOS_RS01095 PF00989 PAS fold CLOS_RS01095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS01100 PF02954 Bacterial regulatory protein, Fis family CLOS_RS01100 PF00072 Response regulator receiver domain CLOS_RS01100 PF00158 Sigma-54 interaction domain CLOS_RS01105 PF01568 Molydopterin dinucleotide binding domain CLOS_RS01105 PF00384 Molybdopterin oxidoreductase CLOS_RS01105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLOS_RS01110 PF01568 Molydopterin dinucleotide binding domain CLOS_RS01110 PF00384 Molybdopterin oxidoreductase CLOS_RS01110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLOS_RS01120 PF13247 4Fe-4S dicluster domain CLOS_RS01125 PF12804 MobA-like NTP transferase domain CLOS_RS01130 PF13187 4Fe-4S dicluster domain CLOS_RS01130 PF01645 Conserved region in glutamate synthase CLOS_RS01135 PF03453 MoeA N-terminal region (domain I and II) CLOS_RS01135 PF03454 MoeA C-terminal region (domain IV) CLOS_RS01135 PF00994 Probable molybdopterin binding domain CLOS_RS01150 PF01032 FecCD transport family CLOS_RS01155 PF00005 ABC transporter CLOS_RS01160 PF01497 Periplasmic binding protein CLOS_RS01170 PF04055 Radical SAM superfamily CLOS_RS01170 PF06968 Biotin and Thiamin Synthesis associated domain CLOS_RS01185 PF01497 Periplasmic binding protein CLOS_RS01190 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLOS_RS01195 PF12704 MacB-like periplasmic core domain CLOS_RS01195 PF02687 FtsX-like permease family CLOS_RS01195 PF00005 ABC transporter CLOS_RS01215 PF00491 Arginase family CLOS_RS01220 PF13145 PPIC-type PPIASE domain CLOS_RS01225 PF08439 Oligopeptidase F CLOS_RS01225 PF01432 Peptidase family M3 CLOS_RS01230 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS01230 PF00072 Response regulator receiver domain CLOS_RS01235 PF00672 HAMP domain CLOS_RS01235 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS01235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS01235 PF00989 PAS fold CLOS_RS01235 PF18698 Histidine kinase sensor domain CLOS_RS01240 PF03590 Aspartate-ammonia ligase CLOS_RS01245 PF00005 ABC transporter CLOS_RS01245 PF00664 ABC transporter transmembrane region CLOS_RS01270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLOS_RS01270 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLOS_RS01270 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLOS_RS01270 PF10371 Domain of unknown function CLOS_RS01270 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLOS_RS01275 PF13091 PLD-like domain CLOS_RS01275 PF13396 Phospholipase_D-nuclease N-terminal CLOS_RS01280 PF01880 Desulfoferrodoxin CLOS_RS01290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS01290 PF00672 HAMP domain CLOS_RS01290 PF02743 Cache domain CLOS_RS01295 PF07516 SecA Wing and Scaffold domain CLOS_RS01295 PF01043 SecA preprotein cross-linking domain CLOS_RS01295 PF07517 SecA DEAD-like domain CLOS_RS01295 PF02810 SEC-C motif CLOS_RS01305 PF01554 MatE CLOS_RS01310 PF01568 Molydopterin dinucleotide binding domain CLOS_RS01310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLOS_RS01310 PF00384 Molybdopterin oxidoreductase CLOS_RS01330 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CLOS_RS01330 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CLOS_RS01335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS01335 PF00672 HAMP domain CLOS_RS01335 PF02743 Cache domain CLOS_RS01355 PF02659 Putative manganese efflux pump CLOS_RS01360 PF01699 Sodium/calcium exchanger protein CLOS_RS01365 PF01594 AI-2E family transporter CLOS_RS01375 PF02803 Thiolase, C-terminal domain CLOS_RS01375 PF00108 Thiolase, N-terminal domain CLOS_RS01380 PF00892 EamA-like transporter family CLOS_RS01385 PF00534 Glycosyl transferases group 1 CLOS_RS01385 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CLOS_RS01395 PF01799 [2Fe-2S] binding domain CLOS_RS01395 PF00111 2Fe-2S iron-sulfur cluster binding domain CLOS_RS01405 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CLOS_RS01405 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CLOS_RS01410 PF02743 Cache domain CLOS_RS01410 PF00672 HAMP domain CLOS_RS01410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS01415 PF12849 PBP superfamily domain CLOS_RS01420 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS01425 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS01430 PF00005 ABC transporter CLOS_RS01435 PF01895 PhoU domain CLOS_RS01455 PF03553 Na+/H+ antiporter family CLOS_RS01465 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLOS_RS01465 PF00037 4Fe-4S binding domain CLOS_RS01465 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLOS_RS01470 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLOS_RS01470 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLOS_RS01470 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLOS_RS01475 PF00883 Cytosol aminopeptidase family, catalytic domain CLOS_RS01475 PF02789 Cytosol aminopeptidase family, N-terminal domain CLOS_RS01480 PF08486 Stage II sporulation protein CLOS_RS01485 PF06257 Biofilm formation stimulator VEG CLOS_RS01490 PF01541 GIY-YIG catalytic domain CLOS_RS01500 PF00288 GHMP kinases N terminal domain CLOS_RS01500 PF08544 GHMP kinases C terminal CLOS_RS01505 PF00392 Bacterial regulatory proteins, gntR family CLOS_RS01505 PF07729 FCD domain CLOS_RS01520 PF03323 Bacillus/Clostridium GerA spore germination protein CLOS_RS01525 PF03845 Spore germination protein CLOS_RS01530 PF05504 Spore germination B3/ GerAC like, C-terminal CLOS_RS01535 PF09551 Stage II sporulation protein R (spore_II_R) CLOS_RS01540 PF07478 D-ala D-ala ligase C-terminus CLOS_RS01540 PF01820 D-ala D-ala ligase N-terminus CLOS_RS01555 PF17853 GGDEF-like domain CLOS_RS01555 PF05651 Putative sugar diacid recognition CLOS_RS01555 PF13556 PucR C-terminal helix-turn-helix domain CLOS_RS01560 PF00578 AhpC/TSA family CLOS_RS01565 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLOS_RS01565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLOS_RS01570 PF08245 Mur ligase middle domain CLOS_RS01570 PF02875 Mur ligase family, glutamate ligase domain CLOS_RS01570 PF01225 Mur ligase family, catalytic domain CLOS_RS01575 PF07687 Peptidase dimerisation domain CLOS_RS01575 PF01546 Peptidase family M20/M25/M40 CLOS_RS01595 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS01600 PF00005 ABC transporter CLOS_RS01605 PF03692 Putative zinc- or iron-chelating domain CLOS_RS01615 PF17853 GGDEF-like domain CLOS_RS01615 PF12833 Helix-turn-helix domain CLOS_RS01625 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CLOS_RS01635 PF01032 FecCD transport family CLOS_RS01640 PF00005 ABC transporter CLOS_RS01645 PF00148 Nitrogenase component 1 type Oxidoreductase CLOS_RS01645 PF11844 Domain of unknown function (DUF3364) CLOS_RS01665 PF03323 Bacillus/Clostridium GerA spore germination protein CLOS_RS01675 PF01032 FecCD transport family CLOS_RS01680 PF00005 ABC transporter CLOS_RS01685 PF00005 ABC transporter CLOS_RS01690 PF01061 ABC-2 type transporter CLOS_RS01695 PF06180 Cobalt chelatase (CbiK) CLOS_RS01700 PF00072 Response regulator receiver domain CLOS_RS01700 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS01705 PF00672 HAMP domain CLOS_RS01705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS01705 PF18698 Histidine kinase sensor domain CLOS_RS01705 PF00989 PAS fold CLOS_RS01705 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS01710 PF02142 MGS-like domain CLOS_RS01735 PF01554 MatE CLOS_RS01740 PF12787 EcsC protein family CLOS_RS01745 PF00291 Pyridoxal-phosphate dependent enzyme CLOS_RS01765 PF01261 Xylose isomerase-like TIM barrel CLOS_RS01780 PF01636 Phosphotransferase enzyme family CLOS_RS01785 PF13302 Acetyltransferase (GNAT) domain CLOS_RS01820 PF13673 Acetyltransferase (GNAT) domain CLOS_RS01825 PF02016 LD-carboxypeptidase N-terminal domain CLOS_RS01825 PF17676 LD-carboxypeptidase C-terminal domain CLOS_RS01850 PF00672 HAMP domain CLOS_RS01850 PF02743 Cache domain CLOS_RS01850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS01855 PF00753 Metallo-beta-lactamase superfamily CLOS_RS01870 PF02151 UvrB/uvrC motif CLOS_RS01870 PF01541 GIY-YIG catalytic domain CLOS_RS01870 PF08459 UvrC Helix-hairpin-helix N-terminal CLOS_RS01875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLOS_RS01885 PF04199 Putative cyclase CLOS_RS01895 PF01979 Amidohydrolase family CLOS_RS01900 PF00857 Isochorismatase family CLOS_RS01905 PF02441 Flavoprotein CLOS_RS01910 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CLOS_RS01915 PF00936 BMC domain CLOS_RS01925 PF00936 BMC domain CLOS_RS01930 PF00936 BMC domain CLOS_RS01945 PF01979 Amidohydrolase family CLOS_RS01945 PF13382 Adenine deaminase C-terminal domain CLOS_RS01950 PF00860 Permease family CLOS_RS01955 PF01979 Amidohydrolase family CLOS_RS01960 PF03450 CO dehydrogenase flavoprotein C-terminal domain CLOS_RS01960 PF00941 FAD binding domain in molybdopterin dehydrogenase CLOS_RS01965 PF00111 2Fe-2S iron-sulfur cluster binding domain CLOS_RS01965 PF01799 [2Fe-2S] binding domain CLOS_RS01970 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CLOS_RS01970 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CLOS_RS01975 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CLOS_RS01980 PF13382 Adenine deaminase C-terminal domain CLOS_RS01980 PF01979 Amidohydrolase family CLOS_RS01995 PF02675 S-adenosylmethionine decarboxylase CLOS_RS02000 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLOS_RS02000 PF01276 Orn/Lys/Arg decarboxylase, major domain CLOS_RS02005 PF17284 Spermidine synthase tetramerisation domain CLOS_RS02010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS02010 PF00672 HAMP domain CLOS_RS02015 PF03061 Thioesterase superfamily CLOS_RS02025 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS02025 PF00072 Response regulator receiver domain CLOS_RS02030 PF08448 PAS fold CLOS_RS02030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS02030 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS02030 PF00072 Response regulator receiver domain CLOS_RS02030 PF13188 PAS domain CLOS_RS02035 PF14537 Cytochrome c3 CLOS_RS02035 PF00890 FAD binding domain CLOS_RS02040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLOS_RS02050 PF17099 Tryptophan transporter TrpP CLOS_RS02055 PF00364 Biotin-requiring enzyme CLOS_RS02060 PF02785 Biotin carboxylase C-terminal domain CLOS_RS02060 PF00289 Biotin carboxylase, N-terminal domain CLOS_RS02060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLOS_RS02065 PF01039 Carboxyl transferase domain CLOS_RS02070 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CLOS_RS02075 PF00581 Rhodanese-like domain CLOS_RS02080 PF03006 Haemolysin-III related CLOS_RS02090 PF17676 LD-carboxypeptidase C-terminal domain CLOS_RS02090 PF02016 LD-carboxypeptidase N-terminal domain CLOS_RS02095 PF01546 Peptidase family M20/M25/M40 CLOS_RS02095 PF07687 Peptidase dimerisation domain CLOS_RS02105 PF13686 DsrE/DsrF/DrsH-like family CLOS_RS02110 PF00266 Aminotransferase class-V CLOS_RS02120 PF01063 Amino-transferase class IV CLOS_RS02125 PF00704 Glycosyl hydrolases family 18 CLOS_RS02125 PF01476 LysM domain CLOS_RS02135 PF17156 Gammaproteobacterial periplasmic sensor domain CLOS_RS02135 PF00990 Diguanylate cyclase, GGDEF domain CLOS_RS02140 PF01170 Putative RNA methylase family UPF0020 CLOS_RS02140 PF02926 THUMP domain CLOS_RS02150 PF04205 FMN-binding domain CLOS_RS02150 PF03358 NADPH-dependent FMN reductase CLOS_RS02150 PF00890 FAD binding domain CLOS_RS02155 PF00149 Calcineurin-like phosphoesterase CLOS_RS02160 PF00158 Sigma-54 interaction domain CLOS_RS02160 PF02954 Bacterial regulatory protein, Fis family CLOS_RS02160 PF13426 PAS domain CLOS_RS02170 PF12544 Lysine-2,3-aminomutase CLOS_RS02170 PF04055 Radical SAM superfamily CLOS_RS02180 PF05192 MutS domain III CLOS_RS02180 PF00488 MutS domain V CLOS_RS02180 PF01624 MutS domain I CLOS_RS02180 PF05188 MutS domain II CLOS_RS02180 PF05190 MutS family domain IV CLOS_RS02185 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit CLOS_RS02190 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase CLOS_RS02190 PF02310 B12 binding domain CLOS_RS02210 PF00072 Response regulator receiver domain CLOS_RS02210 PF04397 LytTr DNA-binding domain CLOS_RS02230 PF03793 PASTA domain CLOS_RS02230 PF00069 Protein kinase domain CLOS_RS02235 PF11734 TilS substrate C-terminal domain CLOS_RS02235 PF01171 PP-loop family CLOS_RS02240 PF00004 ATPase family associated with various cellular activities (AAA) CLOS_RS02240 PF17862 AAA+ lid domain CLOS_RS02240 PF01434 Peptidase family M41 CLOS_RS02245 PF02080 TrkA-C domain CLOS_RS02245 PF06826 Predicted Permease Membrane Region CLOS_RS02255 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CLOS_RS02255 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CLOS_RS02260 PF02310 B12 binding domain CLOS_RS02260 PF01642 Methylmalonyl-CoA mutase CLOS_RS02265 PF02310 B12 binding domain CLOS_RS02265 PF01642 Methylmalonyl-CoA mutase CLOS_RS02280 PF01039 Carboxyl transferase domain CLOS_RS02290 PF00364 Biotin-requiring enzyme CLOS_RS02295 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CLOS_RS02300 PF08279 HTH domain CLOS_RS02300 PF03099 Biotin/lipoate A/B protein ligase family CLOS_RS02300 PF02237 Biotin protein ligase C terminal domain CLOS_RS02310 PF03309 Type III pantothenate kinase CLOS_RS02315 PF01207 Dihydrouridine synthase (Dus) CLOS_RS02325 PF03449 Transcription elongation factor, N-terminal CLOS_RS02325 PF01272 Transcription elongation factor, GreA/GreB, C-term CLOS_RS02330 PF00152 tRNA synthetases class II (D, K and N) CLOS_RS02330 PF01336 OB-fold nucleic acid binding domain CLOS_RS02355 PF17975 Ribonucleotide reductase alpha domain CLOS_RS02355 PF02867 Ribonucleotide reductase, barrel domain CLOS_RS02360 PF03764 Elongation factor G, domain IV CLOS_RS02360 PF00009 Elongation factor Tu GTP binding domain CLOS_RS02360 PF03144 Elongation factor Tu domain 2 CLOS_RS02360 PF00679 Elongation factor G C-terminus CLOS_RS02360 PF14492 Elongation Factor G, domain II CLOS_RS02365 PF02151 UvrB/uvrC motif CLOS_RS02370 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CLOS_RS02375 PF17871 AAA lid domain CLOS_RS02375 PF07724 AAA domain (Cdc48 subfamily) CLOS_RS02375 PF02861 Clp amino terminal domain, pathogenicity island component CLOS_RS02375 PF00004 ATPase family associated with various cellular activities (AAA) CLOS_RS02375 PF10431 C-terminal, D2-small domain, of ClpB protein CLOS_RS02380 PF18073 Rubredoxin metal binding domain CLOS_RS02385 PF10635 DisA bacterial checkpoint controller linker region CLOS_RS02385 PF02457 DisA bacterial checkpoint controller nucleotide-binding CLOS_RS02395 PF02559 CarD-like/TRCF domain CLOS_RS02405 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLOS_RS02405 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLOS_RS02410 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CLOS_RS02415 PF02542 YgbB family CLOS_RS02420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLOS_RS02420 PF09180 Prolyl-tRNA synthetase, C-terminal CLOS_RS02420 PF03129 Anticodon binding domain CLOS_RS02425 PF06207 Protein of unknown function (DUF1002) CLOS_RS02430 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLOS_RS02435 PF00132 Bacterial transferase hexapeptide (six repeats) CLOS_RS02435 PF06426 Serine acetyltransferase, N-terminal CLOS_RS02440 PF09190 DALR domain CLOS_RS02440 PF01406 tRNA synthetases class I (C) catalytic domain CLOS_RS02445 PF00636 Ribonuclease III domain CLOS_RS02455 PF02511 Thymidylate synthase complementing protein CLOS_RS02460 PF00588 SpoU rRNA Methylase family CLOS_RS02460 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLOS_RS02465 PF05991 YacP-like NYN domain CLOS_RS02470 PF08281 Sigma-70, region 4 CLOS_RS02470 PF04542 Sigma-70 region 2 CLOS_RS02475 PF03143 Elongation factor Tu C-terminal domain CLOS_RS02475 PF03144 Elongation factor Tu domain 2 CLOS_RS02475 PF00009 Elongation factor Tu GTP binding domain CLOS_RS02480 PF00471 Ribosomal protein L33 CLOS_RS02490 PF02357 Transcription termination factor nusG CLOS_RS02490 PF00467 KOW motif CLOS_RS02495 PF00298 Ribosomal protein L11, RNA binding domain CLOS_RS02495 PF03946 Ribosomal protein L11, N-terminal domain CLOS_RS02500 PF00687 Ribosomal protein L1p/L10e family CLOS_RS02505 PF00466 Ribosomal protein L10 CLOS_RS02510 PF00542 Ribosomal protein L7/L12 C-terminal domain CLOS_RS02510 PF16320 Ribosomal protein L7/L12 dimerisation domain CLOS_RS02515 PF04560 RNA polymerase Rpb2, domain 7 CLOS_RS02515 PF04563 RNA polymerase beta subunit CLOS_RS02515 PF04565 RNA polymerase Rpb2, domain 3 CLOS_RS02515 PF00562 RNA polymerase Rpb2, domain 6 CLOS_RS02515 PF10385 RNA polymerase beta subunit external 1 domain CLOS_RS02515 PF04561 RNA polymerase Rpb2, domain 2 CLOS_RS02520 PF04998 RNA polymerase Rpb1, domain 5 CLOS_RS02520 PF05000 RNA polymerase Rpb1, domain 4 CLOS_RS02520 PF04997 RNA polymerase Rpb1, domain 1 CLOS_RS02520 PF00623 RNA polymerase Rpb1, domain 2 CLOS_RS02520 PF04983 RNA polymerase Rpb1, domain 3 CLOS_RS02525 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CLOS_RS02530 PF00164 Ribosomal protein S12/S23 CLOS_RS02535 PF00177 Ribosomal protein S7p/S5e CLOS_RS02540 PF03764 Elongation factor G, domain IV CLOS_RS02540 PF14492 Elongation Factor G, domain II CLOS_RS02540 PF00679 Elongation factor G C-terminus CLOS_RS02540 PF03144 Elongation factor Tu domain 2 CLOS_RS02540 PF00009 Elongation factor Tu GTP binding domain CLOS_RS02545 PF03144 Elongation factor Tu domain 2 CLOS_RS02545 PF00009 Elongation factor Tu GTP binding domain CLOS_RS02545 PF03143 Elongation factor Tu C-terminal domain CLOS_RS02550 PF00338 Ribosomal protein S10p/S20e CLOS_RS02555 PF00297 Ribosomal protein L3 CLOS_RS02560 PF00573 Ribosomal protein L4/L1 family CLOS_RS02565 PF00276 Ribosomal protein L23 CLOS_RS02570 PF00181 Ribosomal Proteins L2, RNA binding domain CLOS_RS02570 PF03947 Ribosomal Proteins L2, C-terminal domain CLOS_RS02575 PF00203 Ribosomal protein S19 CLOS_RS02580 PF00237 Ribosomal protein L22p/L17e CLOS_RS02585 PF00189 Ribosomal protein S3, C-terminal domain CLOS_RS02585 PF07650 KH domain CLOS_RS02590 PF00252 Ribosomal protein L16p/L10e CLOS_RS02595 PF00831 Ribosomal L29 protein CLOS_RS02600 PF00366 Ribosomal protein S17 CLOS_RS02605 PF00238 Ribosomal protein L14p/L23e CLOS_RS02610 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CLOS_RS02610 PF00467 KOW motif CLOS_RS02615 PF00673 ribosomal L5P family C-terminus CLOS_RS02615 PF00281 Ribosomal protein L5 CLOS_RS02620 PF00253 Ribosomal protein S14p/S29e CLOS_RS02625 PF00410 Ribosomal protein S8 CLOS_RS02630 PF00347 Ribosomal protein L6 CLOS_RS02635 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CLOS_RS02640 PF00333 Ribosomal protein S5, N-terminal domain CLOS_RS02640 PF03719 Ribosomal protein S5, C-terminal domain CLOS_RS02645 PF00327 Ribosomal protein L30p/L7e CLOS_RS02650 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CLOS_RS02655 PF00344 SecY translocase CLOS_RS02660 PF05191 Adenylate kinase, active site lid CLOS_RS02665 PF00557 Metallopeptidase family M24 CLOS_RS02675 PF01176 Translation initiation factor 1A / IF-1 CLOS_RS02680 PF00444 Ribosomal protein L36 CLOS_RS02685 PF00416 Ribosomal protein S13/S18 CLOS_RS02690 PF00411 Ribosomal protein S11 CLOS_RS02695 PF01479 S4 domain CLOS_RS02695 PF00163 Ribosomal protein S4/S9 N-terminal domain CLOS_RS02700 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CLOS_RS02700 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CLOS_RS02700 PF01000 RNA polymerase Rpb3/RpoA insert domain CLOS_RS02705 PF01196 Ribosomal protein L17 CLOS_RS02710 PF00005 ABC transporter CLOS_RS02715 PF00005 ABC transporter CLOS_RS02720 PF02361 Cobalt transport protein CLOS_RS02725 PF01416 tRNA pseudouridine synthase CLOS_RS02730 PF00572 Ribosomal protein L13 CLOS_RS02735 PF00380 Ribosomal protein S9/S16 CLOS_RS02745 PF01520 N-acetylmuramoyl-L-alanine amidase CLOS_RS02745 PF08239 Bacterial SH3 domain CLOS_RS02755 PF10609 NUBPL iron-transfer P-loop NTPase CLOS_RS02760 PF00478 IMP dehydrogenase / GMP reductase domain CLOS_RS02760 PF00571 CBS domain CLOS_RS02765 PF00117 Glutamine amidotransferase class-I CLOS_RS02765 PF02540 NAD synthase CLOS_RS02765 PF00958 GMP synthase C terminal domain CLOS_RS02770 PF00860 Permease family CLOS_RS02775 PF02222 ATP-grasp domain CLOS_RS02775 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CLOS_RS02780 PF00731 AIR carboxylase CLOS_RS02785 PF00156 Phosphoribosyl transferase domain CLOS_RS02790 PF02769 AIR synthase related protein, C-terminal domain CLOS_RS02790 PF00586 AIR synthase related protein, N-terminal domain CLOS_RS02795 PF00551 Formyl transferase CLOS_RS02800 PF02142 MGS-like domain CLOS_RS02800 PF01808 AICARFT/IMPCHase bienzyme CLOS_RS02805 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CLOS_RS02805 PF02843 Phosphoribosylglycinamide synthetase, C domain CLOS_RS02805 PF02844 Phosphoribosylglycinamide synthetase, N domain CLOS_RS02815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS02815 PF02743 Cache domain CLOS_RS02815 PF00672 HAMP domain CLOS_RS02820 PF03180 NLPA lipoprotein CLOS_RS02825 PF13840 ACT domain CLOS_RS02825 PF00696 Amino acid kinase family CLOS_RS02835 PF00375 Sodium:dicarboxylate symporter family CLOS_RS02840 PF01177 Asp/Glu/Hydantoin racemase CLOS_RS02845 PF02416 mttA/Hcf106 family CLOS_RS02850 PF13361 UvrD-like helicase C-terminal domain CLOS_RS02850 PF00580 UvrD/REP helicase N-terminal domain CLOS_RS02855 PF12826 Helix-hairpin-helix motif CLOS_RS02855 PF03120 NAD-dependent DNA ligase OB-fold domain CLOS_RS02855 PF00533 BRCA1 C Terminus (BRCT) domain CLOS_RS02855 PF01653 NAD-dependent DNA ligase adenylation domain CLOS_RS02885 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLOS_RS02895 PF01138 3' exoribonuclease family, domain 1 CLOS_RS02895 PF03725 3' exoribonuclease family, domain 2 CLOS_RS02900 PF01725 Ham1 family CLOS_RS02905 PF12850 Calcineurin-like phosphoesterase superfamily domain CLOS_RS02960 PF02586 SOS response associated peptidase (SRAP) CLOS_RS02980 PF07687 Peptidase dimerisation domain CLOS_RS02980 PF01546 Peptidase family M20/M25/M40 CLOS_RS02990 PF02634 FdhD/NarQ family CLOS_RS02995 PF04055 Radical SAM superfamily CLOS_RS02995 PF06463 Molybdenum Cofactor Synthesis C CLOS_RS03010 PF01565 FAD binding domain CLOS_RS03010 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CLOS_RS03015 PF03668 P-loop ATPase protein family CLOS_RS03020 PF01933 Uncharacterised protein family UPF0052 CLOS_RS03025 PF00860 Permease family CLOS_RS03030 PF00293 NUDIX domain CLOS_RS03035 PF10298 WhiA N-terminal LAGLIDADG-like domain CLOS_RS03035 PF14527 WhiA LAGLIDADG-like domain CLOS_RS03035 PF02650 WhiA C-terminal HTH domain CLOS_RS03040 PF17391 Urocanase N-terminal domain CLOS_RS03040 PF01175 Urocanase Rossmann-like domain CLOS_RS03040 PF17392 Urocanase C-terminal domain CLOS_RS03045 PF02971 Formiminotransferase domain CLOS_RS03045 PF07837 Formiminotransferase domain, N-terminal subdomain CLOS_RS03055 PF00919 Uncharacterized protein family UPF0004 CLOS_RS03055 PF18693 TRAM domain CLOS_RS03055 PF04055 Radical SAM superfamily CLOS_RS03060 PF01336 OB-fold nucleic acid binding domain CLOS_RS03060 PF14579 Helix-hairpin-helix motif CLOS_RS03060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLOS_RS03060 PF02811 PHP domain CLOS_RS03060 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLOS_RS03070 PF00365 Phosphofructokinase CLOS_RS03075 PF00224 Pyruvate kinase, barrel domain CLOS_RS03075 PF00391 PEP-utilising enzyme, mobile domain CLOS_RS03075 PF02887 Pyruvate kinase, alpha/beta domain CLOS_RS03080 PF00440 Bacterial regulatory proteins, tetR family CLOS_RS03080 PF08359 YsiA-like protein, C-terminal region CLOS_RS03085 PF04205 FMN-binding domain CLOS_RS03085 PF03358 NADPH-dependent FMN reductase CLOS_RS03085 PF00890 FAD binding domain CLOS_RS03095 PF05958 tRNA (Uracil-5-)-methyltransferase CLOS_RS03095 PF01938 TRAM domain CLOS_RS03105 PF13291 ACT domain CLOS_RS03105 PF04607 Region found in RelA / SpoT proteins CLOS_RS03105 PF02824 TGS domain CLOS_RS03120 PF00665 Integrase core domain CLOS_RS03120 PF13333 Integrase core domain CLOS_RS03135 PF00355 Rieske [2Fe-2S] domain CLOS_RS03150 PF12727 PBP superfamily domain CLOS_RS03150 PF12728 Helix-turn-helix domain CLOS_RS03160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLOS_RS03160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLOS_RS03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS03195 PF02702 Osmosensitive K+ channel His kinase sensor domain CLOS_RS03195 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS03195 PF13493 Domain of unknown function (DUF4118) CLOS_RS03200 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS03200 PF00072 Response regulator receiver domain CLOS_RS03215 PF00535 Glycosyl transferase family 2 CLOS_RS03225 PF07694 5TMR of 5TMR-LYT CLOS_RS03225 PF00990 Diguanylate cyclase, GGDEF domain CLOS_RS03230 PF02915 Rubrerythrin CLOS_RS03235 PF01475 Ferric uptake regulator family CLOS_RS03245 PF01588 Putative tRNA binding domain CLOS_RS03250 PF00465 Iron-containing alcohol dehydrogenase CLOS_RS03255 PF06826 Predicted Permease Membrane Region CLOS_RS03255 PF02080 TrkA-C domain CLOS_RS03260 PF08442 ATP-grasp domain CLOS_RS03260 PF00549 CoA-ligase CLOS_RS03265 PF00549 CoA-ligase CLOS_RS03265 PF02629 CoA binding domain CLOS_RS03270 PF03707 Bacterial signalling protein N terminal repeat CLOS_RS03270 PF00563 EAL domain CLOS_RS03270 PF00990 Diguanylate cyclase, GGDEF domain CLOS_RS03275 PF00171 Aldehyde dehydrogenase family CLOS_RS03280 PF01734 Patatin-like phospholipase CLOS_RS03285 PF12683 Protein of unknown function (DUF3798) CLOS_RS03290 PF00005 ABC transporter CLOS_RS03305 PF03960 ArsC family CLOS_RS03320 PF02667 Short chain fatty acid transporter CLOS_RS03325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLOS_RS03325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CLOS_RS03325 PF02770 Acyl-CoA dehydrogenase, middle domain CLOS_RS03330 PF01012 Electron transfer flavoprotein domain CLOS_RS03335 PF01012 Electron transfer flavoprotein domain CLOS_RS03335 PF00766 Electron transfer flavoprotein FAD-binding domain CLOS_RS03340 PF13181 Tetratricopeptide repeat CLOS_RS03340 PF00535 Glycosyl transferase family 2 CLOS_RS03355 PF03167 Uracil DNA glycosylase superfamily CLOS_RS03360 PF01545 Cation efflux family CLOS_RS03360 PF16916 Dimerisation domain of Zinc Transporter CLOS_RS03370 PF07702 UTRA domain CLOS_RS03370 PF00392 Bacterial regulatory proteins, gntR family CLOS_RS03400 PF00392 Bacterial regulatory proteins, gntR family CLOS_RS03400 PF00155 Aminotransferase class I and II CLOS_RS03405 PF00294 pfkB family carbohydrate kinase CLOS_RS03410 PF04227 Indigoidine synthase A like protein CLOS_RS03415 PF00085 Thioredoxin CLOS_RS03420 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLOS_RS03425 PF02535 ZIP Zinc transporter CLOS_RS03430 PF07556 Protein of unknown function (DUF1538) CLOS_RS03440 PF01432 Peptidase family M3 CLOS_RS03440 PF08439 Oligopeptidase F CLOS_RS03450 PF00005 ABC transporter CLOS_RS03455 PF18075 FtsX extracellular domain CLOS_RS03455 PF02687 FtsX-like permease family CLOS_RS03460 PF13419 Haloacid dehalogenase-like hydrolase CLOS_RS03465 PF02073 Thermophilic metalloprotease (M29) CLOS_RS03470 PF00291 Pyridoxal-phosphate dependent enzyme CLOS_RS03475 PF07739 TipAS antibiotic-recognition domain CLOS_RS03475 PF13411 MerR HTH family regulatory protein CLOS_RS03485 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS03485 PF00072 Response regulator receiver domain CLOS_RS03500 PF03063 Prismane/CO dehydrogenase family CLOS_RS03505 PF01595 Cyclin M transmembrane N-terminal domain CLOS_RS03505 PF03471 Transporter associated domain CLOS_RS03505 PF00571 CBS domain CLOS_RS03510 PF12848 ABC transporter CLOS_RS03510 PF00005 ABC transporter CLOS_RS03515 PF02254 TrkA-N domain CLOS_RS03515 PF02080 TrkA-C domain CLOS_RS03520 PF02386 Cation transport protein CLOS_RS03525 PF08534 Redoxin CLOS_RS03530 PF16868 NMT1-like family CLOS_RS03550 PF02557 D-alanyl-D-alanine carboxypeptidase CLOS_RS03560 PF12833 Helix-turn-helix domain CLOS_RS03560 PF12852 Cupin CLOS_RS03565 PF04954 Siderophore-interacting protein CLOS_RS03565 PF00664 ABC transporter transmembrane region CLOS_RS03565 PF00005 ABC transporter CLOS_RS03565 PF08021 Siderophore-interacting FAD-binding domain CLOS_RS03570 PF00005 ABC transporter CLOS_RS03570 PF00664 ABC transporter transmembrane region CLOS_RS03585 PF02638 Glycosyl hydrolase-like 10 CLOS_RS03590 PF02926 THUMP domain CLOS_RS03590 PF10672 S-adenosylmethionine-dependent methyltransferase CLOS_RS03590 PF01170 Putative RNA methylase family UPF0020 CLOS_RS03595 PF01479 S4 domain CLOS_RS03595 PF00849 RNA pseudouridylate synthase CLOS_RS03600 PF13538 UvrD-like helicase C-terminal domain CLOS_RS03605 PF00465 Iron-containing alcohol dehydrogenase CLOS_RS03615 PF04542 Sigma-70 region 2 CLOS_RS03615 PF08281 Sigma-70, region 4 CLOS_RS03630 PF14266 Putative component of 'biosynthetic module' CLOS_RS03635 PF05816 Toxic anion resistance protein (TelA) CLOS_RS03640 PF02342 TerD domain CLOS_RS03650 PF02342 TerD domain CLOS_RS03655 PF02342 TerD domain CLOS_RS03670 PF00005 ABC transporter CLOS_RS03685 PF00005 ABC transporter CLOS_RS03700 PF16658 Class II release factor RF3, C-terminal domain CLOS_RS03700 PF00009 Elongation factor Tu GTP binding domain CLOS_RS03700 PF03144 Elongation factor Tu domain 2 CLOS_RS03705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLOS_RS03705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLOS_RS03720 PF04055 Radical SAM superfamily CLOS_RS03720 PF16199 Radical_SAM C-terminal domain CLOS_RS03725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLOS_RS03725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLOS_RS03730 PF04607 Region found in RelA / SpoT proteins CLOS_RS03740 PF01116 Fructose-bisphosphate aldolase class-II CLOS_RS03745 PF01066 CDP-alcohol phosphatidyltransferase CLOS_RS03750 PF01479 S4 domain CLOS_RS03750 PF00849 RNA pseudouridylate synthase CLOS_RS03755 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLOS_RS03760 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS03765 PF00005 ABC transporter CLOS_RS03770 PF01938 TRAM domain CLOS_RS03770 PF05958 tRNA (Uracil-5-)-methyltransferase CLOS_RS03775 PF00072 Response regulator receiver domain CLOS_RS03775 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS03780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS03780 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS03785 PF12704 MacB-like periplasmic core domain CLOS_RS03785 PF02687 FtsX-like permease family CLOS_RS03785 PF00005 ABC transporter CLOS_RS03795 PF03781 Sulfatase-modifying factor enzyme 1 CLOS_RS03810 PF01695 IstB-like ATP binding protein CLOS_RS03820 PF00665 Integrase core domain CLOS_RS03820 PF13333 Integrase core domain CLOS_RS03860 PF03466 LysR substrate binding domain CLOS_RS03860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLOS_RS03865 PF02567 Phenazine biosynthesis-like protein CLOS_RS03875 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS03875 PF08447 PAS fold CLOS_RS03875 PF00989 PAS fold CLOS_RS03880 PF00158 Sigma-54 interaction domain CLOS_RS03880 PF00072 Response regulator receiver domain CLOS_RS03880 PF02954 Bacterial regulatory protein, Fis family CLOS_RS03885 PF01235 Sodium:alanine symporter family CLOS_RS03895 PF00440 Bacterial regulatory proteins, tetR family CLOS_RS03895 PF16925 Tetracyclin repressor-like, C-terminal domain CLOS_RS03900 PF05977 Transmembrane secretion effector CLOS_RS03910 PF00005 ABC transporter CLOS_RS03915 PF13411 MerR HTH family regulatory protein CLOS_RS03915 PF07739 TipAS antibiotic-recognition domain CLOS_RS03925 PF01872 RibD C-terminal domain CLOS_RS03935 PF06100 MCRA family CLOS_RS03950 PF00092 von Willebrand factor type A domain CLOS_RS03955 PF00132 Bacterial transferase hexapeptide (six repeats) CLOS_RS03965 PF01964 Radical SAM ThiC family CLOS_RS03980 PF00155 Aminotransferase class I and II CLOS_RS03980 PF00392 Bacterial regulatory proteins, gntR family CLOS_RS03990 PF04439 Streptomycin adenylyltransferase CLOS_RS04005 PF00005 ABC transporter CLOS_RS04005 PF17760 UvrA interaction domain CLOS_RS04005 PF17755 UvrA DNA-binding domain CLOS_RS04015 PF03851 UV-endonuclease UvdE CLOS_RS04020 PF04070 Domain of unknown function (DUF378) CLOS_RS04025 PF01381 Helix-turn-helix CLOS_RS04040 PF13411 MerR HTH family regulatory protein CLOS_RS04040 PF07739 TipAS antibiotic-recognition domain CLOS_RS04050 PF08281 Sigma-70, region 4 CLOS_RS04050 PF04542 Sigma-70 region 2 CLOS_RS04065 PF01047 MarR family CLOS_RS04075 PF00072 Response regulator receiver domain CLOS_RS04075 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS04080 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS04080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS04080 PF18719 ArlS sensor domain CLOS_RS04095 PF00936 BMC domain CLOS_RS04100 PF10662 Ethanolamine utilisation - propanediol utilisation CLOS_RS04105 PF01923 Cobalamin adenosyltransferase CLOS_RS04110 PF00465 Iron-containing alcohol dehydrogenase CLOS_RS04115 PF00936 BMC domain CLOS_RS04120 PF06277 Ethanolamine utilisation protein EutA CLOS_RS04125 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CLOS_RS04130 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CLOS_RS04135 PF00936 BMC domain CLOS_RS04140 PF00936 BMC domain CLOS_RS04145 PF00171 Aldehyde dehydrogenase family CLOS_RS04145 PF00465 Iron-containing alcohol dehydrogenase CLOS_RS04150 PF00936 BMC domain CLOS_RS04160 PF06130 Phosphate propanoyltransferase CLOS_RS04170 PF03319 Ethanolamine utilisation protein EutN/carboxysome CLOS_RS04175 PF04346 Ethanolamine utilisation protein, EutH CLOS_RS04180 PF06249 Ethanolamine utilisation protein EutQ CLOS_RS04200 PF13426 PAS domain CLOS_RS04200 PF00158 Sigma-54 interaction domain CLOS_RS04200 PF02954 Bacterial regulatory protein, Fis family CLOS_RS04205 PF02515 CoA-transferase family III CLOS_RS04215 PF00682 HMGL-like CLOS_RS04220 PF08279 HTH domain CLOS_RS04220 PF13280 WYL domain CLOS_RS04250 PF00664 ABC transporter transmembrane region CLOS_RS04250 PF00005 ABC transporter CLOS_RS04255 PF00664 ABC transporter transmembrane region CLOS_RS04255 PF00005 ABC transporter CLOS_RS04260 PF13411 MerR HTH family regulatory protein CLOS_RS04260 PF06445 GyrI-like small molecule binding domain CLOS_RS04265 PF00149 Calcineurin-like phosphoesterase CLOS_RS04275 PF00375 Sodium:dicarboxylate symporter family CLOS_RS04280 PF00291 Pyridoxal-phosphate dependent enzyme CLOS_RS04285 PF00144 Beta-lactamase CLOS_RS04285 PF11954 Domain of unknown function (DUF3471) CLOS_RS04295 PF02417 Chromate transporter CLOS_RS04305 PF03466 LysR substrate binding domain CLOS_RS04305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLOS_RS04310 PF00210 Ferritin-like domain CLOS_RS04320 PF12697 Alpha/beta hydrolase family CLOS_RS04335 PF03062 MBOAT, membrane-bound O-acyltransferase family CLOS_RS04350 PF04294 VanW like protein CLOS_RS04360 PF01276 Orn/Lys/Arg decarboxylase, major domain CLOS_RS04360 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLOS_RS04375 PF07670 Nucleoside recognition CLOS_RS04380 PF00291 Pyridoxal-phosphate dependent enzyme CLOS_RS04385 PF00107 Zinc-binding dehydrogenase CLOS_RS04390 PF01047 MarR family CLOS_RS04400 PF01757 Acyltransferase family CLOS_RS04410 PF02678 Pirin CLOS_RS04410 PF05726 Pirin C-terminal cupin domain CLOS_RS04415 PF07883 Cupin domain CLOS_RS04420 PF17853 GGDEF-like domain CLOS_RS04420 PF13556 PucR C-terminal helix-turn-helix domain CLOS_RS04440 PF02386 Cation transport protein CLOS_RS04450 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS04450 PF02702 Osmosensitive K+ channel His kinase sensor domain CLOS_RS04450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS04450 PF13493 Domain of unknown function (DUF4118) CLOS_RS04455 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS04455 PF00072 Response regulator receiver domain CLOS_RS04460 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLOS_RS04460 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLOS_RS04465 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLOS_RS04465 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLOS_RS04470 PF07969 Amidohydrolase family CLOS_RS04475 PF13520 Amino acid permease CLOS_RS04485 PF00860 Permease family CLOS_RS04490 PF07905 Purine catabolism regulatory protein-like family CLOS_RS04490 PF13556 PucR C-terminal helix-turn-helix domain CLOS_RS04490 PF17853 GGDEF-like domain CLOS_RS04495 PF05651 Putative sugar diacid recognition CLOS_RS04495 PF17853 GGDEF-like domain CLOS_RS04495 PF13556 PucR C-terminal helix-turn-helix domain CLOS_RS04500 PF11392 Protein of unknown function (DUF2877) CLOS_RS04505 PF00549 CoA-ligase CLOS_RS04505 PF02629 CoA binding domain CLOS_RS04510 PF06545 Protein of unknown function (DUF1116) CLOS_RS04520 PF00795 Carbon-nitrogen hydrolase CLOS_RS04525 PF02515 CoA-transferase family III CLOS_RS04530 PF03450 CO dehydrogenase flavoprotein C-terminal domain CLOS_RS04530 PF00941 FAD binding domain in molybdopterin dehydrogenase CLOS_RS04535 PF01799 [2Fe-2S] binding domain CLOS_RS04535 PF00111 2Fe-2S iron-sulfur cluster binding domain CLOS_RS04540 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CLOS_RS04540 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CLOS_RS04545 PF12804 MobA-like NTP transferase domain CLOS_RS04545 PF00132 Bacterial transferase hexapeptide (six repeats) CLOS_RS04550 PF00672 HAMP domain CLOS_RS04550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS04550 PF02743 Cache domain CLOS_RS04555 PF02659 Putative manganese efflux pump CLOS_RS04560 PF01554 MatE CLOS_RS04565 PF01293 Phosphoenolpyruvate carboxykinase CLOS_RS04575 PF00205 Thiamine pyrophosphate enzyme, central domain CLOS_RS04575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLOS_RS04575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLOS_RS04595 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CLOS_RS04595 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLOS_RS04620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLOS_RS04620 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLOS_RS04625 PF01022 Bacterial regulatory protein, arsR family CLOS_RS04630 PF00672 HAMP domain CLOS_RS04630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS04630 PF02743 Cache domain CLOS_RS04635 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CLOS_RS04640 PF05067 Manganese containing catalase CLOS_RS04675 PF10502 Signal peptidase, peptidase S26 CLOS_RS04680 PF08331 Domain of unknown function (DUF1730) CLOS_RS04685 PF05362 Lon protease (S16) C-terminal proteolytic domain CLOS_RS04685 PF13654 AAA domain CLOS_RS04690 PF00155 Aminotransferase class I and II CLOS_RS04695 PF10576 Iron-sulfur binding domain of endonuclease III CLOS_RS04695 PF00730 HhH-GPD superfamily base excision DNA repair protein CLOS_RS04695 PF00633 Helix-hairpin-helix motif CLOS_RS04700 PF02491 SHS2 domain inserted in FTSA CLOS_RS04705 PF04294 VanW like protein CLOS_RS04720 PF01497 Periplasmic binding protein CLOS_RS04725 PF01032 FecCD transport family CLOS_RS04730 PF00005 ABC transporter CLOS_RS04735 PF01475 Ferric uptake regulator family CLOS_RS04745 PF00149 Calcineurin-like phosphoesterase CLOS_RS04745 PF02872 5'-nucleotidase, C-terminal domain CLOS_RS04750 PF00579 tRNA synthetases class I (W and Y) CLOS_RS04750 PF01479 S4 domain CLOS_RS04780 PF13378 Enolase C-terminal domain-like CLOS_RS04780 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CLOS_RS04790 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLOS_RS04790 PF00037 4Fe-4S binding domain CLOS_RS04790 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLOS_RS04795 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLOS_RS04795 PF00037 4Fe-4S binding domain CLOS_RS04795 PF02256 Iron hydrogenase small subunit CLOS_RS04795 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLOS_RS04815 PF00005 ABC transporter CLOS_RS04820 PF00924 Mechanosensitive ion channel CLOS_RS04825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLOS_RS04825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CLOS_RS04830 PF04073 Aminoacyl-tRNA editing domain CLOS_RS04845 PF08281 Sigma-70, region 4 CLOS_RS04845 PF04542 Sigma-70 region 2 CLOS_RS04860 PF00072 Response regulator receiver domain CLOS_RS04860 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS04865 PF18719 ArlS sensor domain CLOS_RS04865 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS04865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS04870 PF12848 ABC transporter CLOS_RS04870 PF00005 ABC transporter CLOS_RS04875 PF02673 Bacitracin resistance protein BacA CLOS_RS04890 PF01032 FecCD transport family CLOS_RS04895 PF00005 ABC transporter CLOS_RS04900 PF00588 SpoU rRNA Methylase family CLOS_RS04905 PF02645 Uncharacterised protein, DegV family COG1307 CLOS_RS04915 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLOS_RS04920 PF00085 Thioredoxin CLOS_RS04925 PF09338 Glycine/sarcosine/betaine reductase component B subunits CLOS_RS04930 PF04723 Glycine reductase complex selenoprotein A CLOS_RS04935 PF04723 Glycine reductase complex selenoprotein A CLOS_RS04940 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) CLOS_RS04945 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) CLOS_RS04950 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLOS_RS04955 PF02504 Fatty acid synthesis protein CLOS_RS04960 PF02608 ABC transporter substrate-binding protein PnrA-like CLOS_RS04965 PF11230 Protein of unknown function (DUF3029) CLOS_RS04970 PF04055 Radical SAM superfamily CLOS_RS04975 PF00005 ABC transporter CLOS_RS04980 PF02653 Branched-chain amino acid transport system / permease component CLOS_RS04985 PF02653 Branched-chain amino acid transport system / permease component CLOS_RS04990 PF04963 Sigma-54 factor, core binding domain CLOS_RS04990 PF00309 Sigma-54 factor, Activator interacting domain (AID) CLOS_RS04990 PF04552 Sigma-54, DNA binding domain CLOS_RS04995 PF04198 Putative sugar-binding domain CLOS_RS05000 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLOS_RS05000 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLOS_RS05005 PF00162 Phosphoglycerate kinase CLOS_RS05010 PF00121 Triosephosphate isomerase CLOS_RS05015 PF01676 Metalloenzyme superfamily CLOS_RS05015 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CLOS_RS05020 PF00113 Enolase, C-terminal TIM barrel domain CLOS_RS05020 PF03952 Enolase, N-terminal domain CLOS_RS05030 PF03030 Inorganic H+ pyrophosphatase CLOS_RS05035 PF06961 Protein of unknown function (DUF1294) CLOS_RS05040 PF00575 S1 RNA binding domain CLOS_RS05040 PF00773 RNB domain CLOS_RS05040 PF08206 Ribonuclease B OB domain CLOS_RS05040 PF17876 Cold shock domain CLOS_RS05045 PF01668 SmpB protein CLOS_RS05050 PF00271 Helicase conserved C-terminal domain CLOS_RS05050 PF00570 HRDC domain CLOS_RS05050 PF16124 RecQ zinc-binding CLOS_RS05050 PF09382 RQC domain CLOS_RS05050 PF00270 DEAD/DEAH box helicase CLOS_RS05055 PF00005 ABC transporter CLOS_RS05060 PF02687 FtsX-like permease family CLOS_RS05065 PF00072 Response regulator receiver domain CLOS_RS05065 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS05070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS05085 PF10431 C-terminal, D2-small domain, of ClpB protein CLOS_RS05085 PF17871 AAA lid domain CLOS_RS05085 PF07724 AAA domain (Cdc48 subfamily) CLOS_RS05085 PF00004 ATPase family associated with various cellular activities (AAA) CLOS_RS05100 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLOS_RS05100 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLOS_RS05100 PF00037 4Fe-4S binding domain CLOS_RS05105 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLOS_RS05105 PF02256 Iron hydrogenase small subunit CLOS_RS05105 PF00037 4Fe-4S binding domain CLOS_RS05105 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLOS_RS05110 PF06968 Biotin and Thiamin Synthesis associated domain CLOS_RS05110 PF04055 Radical SAM superfamily CLOS_RS05120 PF07650 KH domain CLOS_RS05120 PF01926 50S ribosome-binding GTPase CLOS_RS05125 PF01479 S4 domain CLOS_RS05125 PF00849 RNA pseudouridylate synthase CLOS_RS05130 PF08241 Methyltransferase domain CLOS_RS05135 PF16360 GTP-binding GTPase Middle Region CLOS_RS05135 PF13167 GTP-binding GTPase N-terminal CLOS_RS05135 PF01926 50S ribosome-binding GTPase CLOS_RS05140 PF10990 Protein of unknown function (DUF2809) CLOS_RS05150 PF00563 EAL domain CLOS_RS05150 PF12792 CSS motif domain associated with EAL CLOS_RS05160 PF01588 Putative tRNA binding domain CLOS_RS05160 PF09334 tRNA synthetases class I (M) CLOS_RS05160 PF08264 Anticodon-binding domain of tRNA CLOS_RS05165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLOS_RS05165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLOS_RS05170 PF09334 tRNA synthetases class I (M) CLOS_RS05180 PF03848 Tellurite resistance protein TehB CLOS_RS05185 PF04951 D-aminopeptidase CLOS_RS05200 PF00795 Carbon-nitrogen hydrolase CLOS_RS05205 PF03459 TOBE domain CLOS_RS05210 PF01891 Cobalt uptake substrate-specific transmembrane region CLOS_RS05215 PF02553 Cobalt transport protein component CbiN CLOS_RS05220 PF02361 Cobalt transport protein CLOS_RS05225 PF00005 ABC transporter CLOS_RS05230 PF02570 Precorrin-8X methylmutase CLOS_RS05235 PF01888 CbiD CLOS_RS05240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLOS_RS05245 PF05175 Methyltransferase small domain CLOS_RS05250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLOS_RS05255 PF11760 Cobalamin synthesis G N-terminal CLOS_RS05255 PF01890 Cobalamin synthesis G C-terminus CLOS_RS05255 PF11761 Cobalamin biosynthesis central region CLOS_RS05260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLOS_RS05265 PF02571 Precorrin-6x reductase CbiJ/CobK CLOS_RS05270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLOS_RS05275 PF02417 Chromate transporter CLOS_RS05285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLOS_RS05285 PF03466 LysR substrate binding domain CLOS_RS05290 PF04143 Sulphur transport CLOS_RS05300 PF04143 Sulphur transport CLOS_RS05305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLOS_RS05305 PF03466 LysR substrate binding domain CLOS_RS05335 PF01751 Toprim domain CLOS_RS05335 PF01131 DNA topoisomerase CLOS_RS05350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLOS_RS05350 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLOS_RS05355 PF01171 PP-loop family CLOS_RS05360 PF00176 SNF2 family N-terminal domain CLOS_RS05360 PF00271 Helicase conserved C-terminal domain CLOS_RS05360 PF12419 SNF2 Helicase protein CLOS_RS05380 PF04024 PspC domain CLOS_RS05395 PF01145 SPFH domain / Band 7 family CLOS_RS05395 PF15975 Flotillin CLOS_RS05405 PF00589 Phage integrase family CLOS_RS05405 PF14659 Phage integrase, N-terminal SAM-like domain CLOS_RS05415 PF01381 Helix-turn-helix CLOS_RS05445 PF01695 IstB-like ATP binding protein CLOS_RS05460 PF00672 HAMP domain CLOS_RS05460 PF12729 Four helix bundle sensory module for signal transduction CLOS_RS05460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS05465 PF01790 Prolipoprotein diacylglyceryl transferase CLOS_RS05510 PF00403 Heavy-metal-associated domain CLOS_RS05545 PF00291 Pyridoxal-phosphate dependent enzyme CLOS_RS05550 PF01053 Cys/Met metabolism PLP-dependent enzyme CLOS_RS05555 PF02664 S-Ribosylhomocysteinase (LuxS) CLOS_RS05560 PF13649 Methyltransferase domain CLOS_RS05570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS05570 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS05570 PF00989 PAS fold CLOS_RS05575 PF02954 Bacterial regulatory protein, Fis family CLOS_RS05575 PF00072 Response regulator receiver domain CLOS_RS05575 PF00158 Sigma-54 interaction domain CLOS_RS05585 PF01209 ubiE/COQ5 methyltransferase family CLOS_RS05590 PF02535 ZIP Zinc transporter CLOS_RS05595 PF01252 Signal peptidase (SPase) II CLOS_RS05605 PF01022 Bacterial regulatory protein, arsR family CLOS_RS05615 PF00403 Heavy-metal-associated domain CLOS_RS05630 PF13411 MerR HTH family regulatory protein CLOS_RS05640 PF00005 ABC transporter CLOS_RS05650 PF04542 Sigma-70 region 2 CLOS_RS05650 PF08281 Sigma-70, region 4 CLOS_RS05655 PF13847 Methyltransferase domain CLOS_RS05660 PF12804 MobA-like NTP transferase domain CLOS_RS05665 PF00384 Molybdopterin oxidoreductase CLOS_RS05665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLOS_RS05665 PF01568 Molydopterin dinucleotide binding domain CLOS_RS05670 PF00037 4Fe-4S binding domain CLOS_RS05670 PF13247 4Fe-4S dicluster domain CLOS_RS05680 PF13247 4Fe-4S dicluster domain CLOS_RS05680 PF12800 4Fe-4S binding domain CLOS_RS05690 PF02416 mttA/Hcf106 family CLOS_RS05695 PF00994 Probable molybdopterin binding domain CLOS_RS05695 PF02464 Competence-damaged protein CLOS_RS05700 PF03454 MoeA C-terminal region (domain IV) CLOS_RS05700 PF00994 Probable molybdopterin binding domain CLOS_RS05700 PF03453 MoeA N-terminal region (domain I and II) CLOS_RS05720 PF01022 Bacterial regulatory protein, arsR family CLOS_RS05730 PF06953 Arsenical resistance operon trans-acting repressor ArsD CLOS_RS05735 PF02374 Anion-transporting ATPase CLOS_RS05745 PF01022 Bacterial regulatory protein, arsR family CLOS_RS05750 PF01451 Low molecular weight phosphotyrosine protein phosphatase CLOS_RS05755 PF01758 Sodium Bile acid symporter family CLOS_RS05765 PF12849 PBP superfamily domain CLOS_RS05770 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS05775 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS05780 PF00005 ABC transporter CLOS_RS05785 PF01895 PhoU domain CLOS_RS05800 PF03773 Predicted permease CLOS_RS05845 PF03480 Bacterial extracellular solute-binding protein, family 7 CLOS_RS05855 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CLOS_RS05860 PF13344 Haloacid dehalogenase-like hydrolase CLOS_RS05865 PF04309 Glycerol-3-phosphate responsive antiterminator CLOS_RS05870 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLOS_RS05870 PF04324 BFD-like [2Fe-2S] binding domain CLOS_RS05875 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLOS_RS05875 PF04324 BFD-like [2Fe-2S] binding domain CLOS_RS05885 PF02308 MgtC family CLOS_RS05915 PF13597 Anaerobic ribonucleoside-triphosphate reductase CLOS_RS05915 PF03477 ATP cone domain CLOS_RS05920 PF04055 Radical SAM superfamily CLOS_RS05935 PF00999 Sodium/hydrogen exchanger family CLOS_RS05950 PF03772 Competence protein CLOS_RS05950 PF13567 Domain of unknown function (DUF4131) CLOS_RS05950 PF00753 Metallo-beta-lactamase superfamily CLOS_RS05960 PF00300 Histidine phosphatase superfamily (branch 1) CLOS_RS05965 PF00881 Nitroreductase family CLOS_RS05980 PF02245 Methylpurine-DNA glycosylase (MPG) CLOS_RS05985 PF01070 FMN-dependent dehydrogenase CLOS_RS05990 PF01522 Polysaccharide deacetylase CLOS_RS06000 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLOS_RS06000 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLOS_RS06005 PF00701 Dihydrodipicolinate synthetase family CLOS_RS06010 PF05173 Dihydrodipicolinate reductase, C-terminus CLOS_RS06010 PF01113 Dihydrodipicolinate reductase, N-terminus CLOS_RS06020 PF00375 Sodium:dicarboxylate symporter family CLOS_RS06025 PF01432 Peptidase family M3 CLOS_RS06025 PF08439 Oligopeptidase F CLOS_RS06045 PF01513 ATP-NAD kinase CLOS_RS06050 PF00849 RNA pseudouridylate synthase CLOS_RS06060 PF01434 Peptidase family M41 CLOS_RS06060 PF00004 ATPase family associated with various cellular activities (AAA) CLOS_RS06060 PF17862 AAA+ lid domain CLOS_RS06065 PF03453 MoeA N-terminal region (domain I and II) CLOS_RS06065 PF00994 Probable molybdopterin binding domain CLOS_RS06065 PF03454 MoeA C-terminal region (domain IV) CLOS_RS06070 PF03454 MoeA C-terminal region (domain IV) CLOS_RS06070 PF00994 Probable molybdopterin binding domain CLOS_RS06070 PF03453 MoeA N-terminal region (domain I and II) CLOS_RS06080 PF01943 Polysaccharide biosynthesis protein CLOS_RS06080 PF14667 Polysaccharide biosynthesis C-terminal domain CLOS_RS06085 PF08448 PAS fold CLOS_RS06085 PF00990 Diguanylate cyclase, GGDEF domain CLOS_RS06095 PF00005 ABC transporter CLOS_RS06095 PF00664 ABC transporter transmembrane region CLOS_RS06100 PF00005 ABC transporter CLOS_RS06100 PF00664 ABC transporter transmembrane region CLOS_RS06110 PF00155 Aminotransferase class I and II CLOS_RS06115 PF00781 Diacylglycerol kinase catalytic domain CLOS_RS06120 PF01047 MarR family CLOS_RS06125 PF00990 Diguanylate cyclase, GGDEF domain CLOS_RS06130 PF00221 Aromatic amino acid lyase CLOS_RS06135 PF01979 Amidohydrolase family CLOS_RS06150 PF01584 CheW-like domain CLOS_RS06160 PF07730 Histidine kinase CLOS_RS06160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS06160 PF05384 Sensor protein DegS CLOS_RS06165 PF00196 Bacterial regulatory proteins, luxR family CLOS_RS06165 PF00072 Response regulator receiver domain CLOS_RS06170 PF02645 Uncharacterised protein, DegV family COG1307 CLOS_RS06175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLOS_RS06175 PF03466 LysR substrate binding domain CLOS_RS06180 PF04607 Region found in RelA / SpoT proteins CLOS_RS06195 PF00005 ABC transporter CLOS_RS06200 PF00005 ABC transporter CLOS_RS06200 PF02687 FtsX-like permease family CLOS_RS06200 PF12704 MacB-like periplasmic core domain CLOS_RS06205 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS06205 PF00072 Response regulator receiver domain CLOS_RS06210 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS06210 PF00989 PAS fold CLOS_RS06210 PF18698 Histidine kinase sensor domain CLOS_RS06210 PF00672 HAMP domain CLOS_RS06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS06220 PF04542 Sigma-70 region 2 CLOS_RS06220 PF08281 Sigma-70, region 4 CLOS_RS06230 PF00476 DNA polymerase family A CLOS_RS06230 PF01367 5'-3' exonuclease, C-terminal SAM fold CLOS_RS06230 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CLOS_RS06235 PF01121 Dephospho-CoA kinase CLOS_RS06240 PF01464 Transglycosylase SLT domain CLOS_RS06240 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CLOS_RS06245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLOS_RS06260 PF01327 Polypeptide deformylase CLOS_RS06265 PF07969 Amidohydrolase family CLOS_RS06270 PF01814 Hemerythrin HHE cation binding domain CLOS_RS06290 PF02223 Thymidylate kinase CLOS_RS06295 PF00270 DEAD/DEAH box helicase CLOS_RS06295 PF00271 Helicase conserved C-terminal domain CLOS_RS06310 PF00753 Metallo-beta-lactamase superfamily CLOS_RS06310 PF03772 Competence protein CLOS_RS06310 PF13567 Domain of unknown function (DUF4131) CLOS_RS06320 PF13567 Domain of unknown function (DUF4131) CLOS_RS06320 PF00753 Metallo-beta-lactamase superfamily CLOS_RS06320 PF03772 Competence protein CLOS_RS06330 PF01649 Ribosomal protein S20 CLOS_RS06335 PF03418 Germination protease CLOS_RS06350 PF00679 Elongation factor G C-terminus CLOS_RS06350 PF06421 GTP-binding protein LepA C-terminus CLOS_RS06350 PF03144 Elongation factor Tu domain 2 CLOS_RS06350 PF00009 Elongation factor Tu GTP binding domain CLOS_RS06355 PF04055 Radical SAM superfamily CLOS_RS06355 PF06969 HemN C-terminal domain CLOS_RS06360 PF01628 HrcA protein C terminal domain CLOS_RS06365 PF01025 GrpE CLOS_RS06370 PF00012 Hsp70 protein CLOS_RS06375 PF00684 DnaJ central domain CLOS_RS06375 PF01556 DnaJ C terminal domain CLOS_RS06375 PF00226 DnaJ domain CLOS_RS06385 PF04452 RNA methyltransferase CLOS_RS06390 PF00919 Uncharacterized protein family UPF0004 CLOS_RS06390 PF01938 TRAM domain CLOS_RS06390 PF04055 Radical SAM superfamily CLOS_RS06395 PF01230 HIT domain CLOS_RS06400 PF01165 Ribosomal protein S21 CLOS_RS06405 PF09424 Yqey-like protein CLOS_RS06415 PF12127 SigmaW regulon antibacterial CLOS_RS06425 PF07873 YabP family CLOS_RS06435 PF02562 PhoH-like protein CLOS_RS06440 PF01966 HD domain CLOS_RS06440 PF07698 7TM receptor with intracellular HD hydrolase CLOS_RS06440 PF07697 7TM-HD extracellular CLOS_RS06445 PF02130 Uncharacterized protein family UPF0054 CLOS_RS06450 PF01219 Prokaryotic diacylglycerol kinase CLOS_RS06460 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLOS_RS06465 PF07650 KH domain CLOS_RS06465 PF01926 50S ribosome-binding GTPase CLOS_RS06470 PF02565 Recombination protein O C terminal CLOS_RS06470 PF11967 Recombination protein O N terminal CLOS_RS06475 PF00889 Elongation factor TS CLOS_RS06480 PF03129 Anticodon binding domain CLOS_RS06480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLOS_RS06485 PF00571 CBS domain CLOS_RS06485 PF08279 HTH domain CLOS_RS06490 PF03618 Kinase/pyrophosphorylase CLOS_RS06495 PF02896 PEP-utilising enzyme, TIM barrel domain CLOS_RS06495 PF00391 PEP-utilising enzyme, mobile domain CLOS_RS06495 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CLOS_RS06500 PF00117 Glutamine amidotransferase class-I CLOS_RS06500 PF00958 GMP synthase C terminal domain CLOS_RS06500 PF13302 Acetyltransferase (GNAT) domain CLOS_RS06500 PF13673 Acetyltransferase (GNAT) domain CLOS_RS06500 PF03352 Methyladenine glycosylase CLOS_RS06525 PF13302 Acetyltransferase (GNAT) domain CLOS_RS06545 PF00005 ABC transporter CLOS_RS06560 PF03551 Transcriptional regulator PadR-like family CLOS_RS06575 PF11188 Protein of unknown function (DUF2975) CLOS_RS06580 PF13443 Cro/C1-type HTH DNA-binding domain CLOS_RS06585 PF01494 FAD binding domain CLOS_RS06595 PF01966 HD domain CLOS_RS06595 PF13286 Phosphohydrolase-associated domain CLOS_RS06600 PF10410 DnaB-helicase binding domain of primase CLOS_RS06600 PF01807 CHC2 zinc finger CLOS_RS06600 PF08275 DNA primase catalytic core, N-terminal domain CLOS_RS06605 PF04545 Sigma-70, region 4 CLOS_RS06605 PF03979 Sigma-70 factor, region 1.1 CLOS_RS06605 PF04539 Sigma-70 region 3 CLOS_RS06605 PF04542 Sigma-70 region 2 CLOS_RS06605 PF00140 Sigma-70 factor, region 1.2 CLOS_RS06615 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CLOS_RS06620 PF01784 NIF3 (NGG1p interacting factor 3) CLOS_RS06630 PF00589 Phage integrase family CLOS_RS06630 PF14659 Phage integrase, N-terminal SAM-like domain CLOS_RS06640 PF01381 Helix-turn-helix CLOS_RS06640 PF07883 Cupin domain CLOS_RS06675 PF10410 DnaB-helicase binding domain of primase CLOS_RS06675 PF08278 DNA primase DnaG DnaB-binding CLOS_RS06675 PF08275 DNA primase catalytic core, N-terminal domain CLOS_RS06675 PF13662 Toprim domain CLOS_RS06675 PF01807 CHC2 zinc finger CLOS_RS06770 PF05139 Erythromycin esterase CLOS_RS06800 PF01555 DNA methylase CLOS_RS06800 PF18273 Type III R-M EcoP15I C-terminal domain CLOS_RS06805 PF08774 VRR-NUC domain CLOS_RS06805 PF04851 Type III restriction enzyme, res subunit CLOS_RS06820 PF04002 RadC-like JAB domain CLOS_RS06830 PF00899 ThiF family CLOS_RS06835 PF00005 ABC transporter CLOS_RS06835 PF17755 UvrA DNA-binding domain CLOS_RS06835 PF17760 UvrA interaction domain CLOS_RS06840 PF01488 Shikimate / quinate 5-dehydrogenase CLOS_RS06840 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CLOS_RS06850 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CLOS_RS06850 PF01488 Shikimate / quinate 5-dehydrogenase CLOS_RS06855 PF03900 Porphobilinogen deaminase, C-terminal domain CLOS_RS06855 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CLOS_RS06860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLOS_RS06860 PF02602 Uroporphyrinogen-III synthase HemD CLOS_RS06865 PF00490 Delta-aminolevulinic acid dehydratase CLOS_RS06870 PF00202 Aminotransferase class-III CLOS_RS06880 PF01741 Large-conductance mechanosensitive channel, MscL CLOS_RS06890 PF02554 Carbon starvation protein CstA CLOS_RS06895 PF04397 LytTr DNA-binding domain CLOS_RS06895 PF00072 Response regulator receiver domain CLOS_RS06900 PF07694 5TMR of 5TMR-LYT CLOS_RS06900 PF06580 Histidine kinase CLOS_RS06920 PF00293 NUDIX domain CLOS_RS06925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLOS_RS06930 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS06935 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS06935 PF12911 N-terminal TM domain of oligopeptide transport permease C CLOS_RS06940 PF00005 ABC transporter CLOS_RS06940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLOS_RS06945 PF00005 ABC transporter CLOS_RS06945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLOS_RS06955 PF01575 MaoC like domain CLOS_RS06960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLOS_RS06965 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS06970 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS06970 PF12911 N-terminal TM domain of oligopeptide transport permease C CLOS_RS06975 PF00005 ABC transporter CLOS_RS06975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLOS_RS06980 PF00005 ABC transporter CLOS_RS06980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLOS_RS06985 PF01923 Cobalamin adenosyltransferase CLOS_RS06990 PF00156 Phosphoribosyl transferase domain CLOS_RS07010 PF01264 Chorismate synthase CLOS_RS07015 PF01761 3-dehydroquinate synthase CLOS_RS07020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLOS_RS07025 PF06130 Phosphate propanoyltransferase CLOS_RS07030 PF01791 DeoC/LacD family aldolase CLOS_RS07045 PF01926 50S ribosome-binding GTPase CLOS_RS07045 PF06071 Protein of unknown function (DUF933) CLOS_RS07060 PF00675 Insulinase (Peptidase family M16) CLOS_RS07060 PF05193 Peptidase M16 inactive domain CLOS_RS07065 PF01790 Prolipoprotein diacylglyceryl transferase CLOS_RS07070 PF02381 MraZ protein, putative antitoxin-like CLOS_RS07075 PF01795 MraW methylase family CLOS_RS07085 PF03793 PASTA domain CLOS_RS07085 PF00905 Penicillin binding protein transpeptidase domain CLOS_RS07085 PF03717 Penicillin-binding Protein dimerisation domain CLOS_RS07090 PF08245 Mur ligase middle domain CLOS_RS07090 PF01225 Mur ligase family, catalytic domain CLOS_RS07090 PF02875 Mur ligase family, glutamate ligase domain CLOS_RS07095 PF01225 Mur ligase family, catalytic domain CLOS_RS07095 PF02875 Mur ligase family, glutamate ligase domain CLOS_RS07095 PF08245 Mur ligase middle domain CLOS_RS07100 PF00953 Glycosyl transferase family 4 CLOS_RS07105 PF08245 Mur ligase middle domain CLOS_RS07105 PF02875 Mur ligase family, glutamate ligase domain CLOS_RS07110 PF01098 Cell cycle protein CLOS_RS07115 PF04101 Glycosyltransferase family 28 C-terminal domain CLOS_RS07115 PF03033 Glycosyltransferase family 28 N-terminal domain CLOS_RS07120 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLOS_RS07140 PF06947 Protein of unknown function (DUF1290) CLOS_RS07145 PF00091 Tubulin/FtsZ family, GTPase domain CLOS_RS07145 PF12327 FtsZ family, C-terminal domain CLOS_RS07150 PF03419 Sporulation factor SpoIIGA CLOS_RS07155 PF04545 Sigma-70, region 4 CLOS_RS07155 PF04542 Sigma-70 region 2 CLOS_RS07160 PF04539 Sigma-70 region 3 CLOS_RS07160 PF04542 Sigma-70 region 2 CLOS_RS07160 PF04545 Sigma-70, region 4 CLOS_RS07165 PF05239 PRC-barrel domain CLOS_RS07170 PF03477 ATP cone domain CLOS_RS07175 PF02578 Multi-copper polyphenol oxidoreductase laccase CLOS_RS07180 PF00072 Response regulator receiver domain CLOS_RS07180 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS07185 PF00672 HAMP domain CLOS_RS07185 PF13426 PAS domain CLOS_RS07185 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS07185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS07215 PF01926 50S ribosome-binding GTPase CLOS_RS07215 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CLOS_RS07220 PF02660 Glycerol-3-phosphate acyltransferase CLOS_RS07225 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CLOS_RS07225 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CLOS_RS07230 PF09547 Stage IV sporulation protein A (spore_IV_A) CLOS_RS07240 PF13687 Domain of unknown function (DUF4153) CLOS_RS07255 PF01168 Alanine racemase, N-terminal domain CLOS_RS07260 PF04472 Cell division protein SepF CLOS_RS07270 PF17774 Putative RNA-binding domain in YlmH CLOS_RS07270 PF01479 S4 domain CLOS_RS07275 PF05103 DivIVA protein CLOS_RS07280 PF01048 Phosphorylase superfamily CLOS_RS07285 PF18152 DAHP synthase ferredoxin-like domain CLOS_RS07285 PF00793 DAHP synthetase I family CLOS_RS07295 PF01258 Prokaryotic dksA/traR C4-type zinc finger CLOS_RS07300 PF01252 Signal peptidase (SPase) II CLOS_RS07305 PF01479 S4 domain CLOS_RS07305 PF00849 RNA pseudouridylate synthase CLOS_RS07310 PF00156 Phosphoribosyl transferase domain CLOS_RS07315 PF05670 NFACT protein RNA binding domain CLOS_RS07320 PF01678 Diaminopimelate epimerase CLOS_RS07325 PF03755 YicC-like family, N-terminal region CLOS_RS07325 PF08340 Domain of unknown function (DUF1732) CLOS_RS07330 PF04025 Domain of unknown function (DUF370) CLOS_RS07335 PF00625 Guanylate kinase CLOS_RS07340 PF01192 RNA polymerase Rpb6 CLOS_RS07345 PF02441 Flavoprotein CLOS_RS07345 PF04127 DNA / pantothenate metabolism flavoprotein CLOS_RS07350 PF04851 Type III restriction enzyme, res subunit CLOS_RS07350 PF00271 Helicase conserved C-terminal domain CLOS_RS07350 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CLOS_RS07350 PF18074 Primosomal protein N C-terminal domain CLOS_RS07350 PF17764 3′ DNA-binding domain (3′BD) CLOS_RS07355 PF01327 Polypeptide deformylase CLOS_RS07360 PF00551 Formyl transferase CLOS_RS07360 PF02911 Formyl transferase, C-terminal domain CLOS_RS07370 PF04298 Putative neutral zinc metallopeptidase CLOS_RS07375 PF01029 NusB family CLOS_RS07375 PF01189 16S rRNA methyltransferase RsmB/F CLOS_RS07380 PF04055 Radical SAM superfamily CLOS_RS07390 PF00069 Protein kinase domain CLOS_RS07390 PF03793 PASTA domain CLOS_RS07395 PF03193 RsgA GTPase CLOS_RS07395 PF16745 RsgA N-terminal domain CLOS_RS07400 PF00834 Ribulose-phosphate 3 epimerase family CLOS_RS07405 PF04263 Thiamin pyrophosphokinase, catalytic domain CLOS_RS07405 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CLOS_RS07410 PF00830 Ribosomal L28 family CLOS_RS07415 PF03780 Asp23 family, cell envelope-related function CLOS_RS07420 PF02734 DAK2 domain CLOS_RS07420 PF13684 Dihydroxyacetone kinase family CLOS_RS07425 PF00270 DEAD/DEAH box helicase CLOS_RS07425 PF00271 Helicase conserved C-terminal domain CLOS_RS07425 PF17191 RecG wedge domain CLOS_RS07435 PF01467 Cytidylyltransferase-like CLOS_RS07445 PF07670 Nucleoside recognition CLOS_RS07450 PF05636 HIGH Nucleotidyl Transferase CLOS_RS07455 PF00871 Acetokinase family CLOS_RS07465 PF01783 Ribosomal L32p protein family CLOS_RS07475 PF02504 Fatty acid synthesis protein CLOS_RS07480 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLOS_RS07480 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLOS_RS07485 PF03060 Nitronate monooxygenase CLOS_RS07490 PF00698 Acyl transferase domain CLOS_RS07500 PF00550 Phosphopantetheine attachment site CLOS_RS07505 PF02801 Beta-ketoacyl synthase, C-terminal domain CLOS_RS07505 PF00109 Beta-ketoacyl synthase, N-terminal domain CLOS_RS07510 PF00035 Double-stranded RNA binding motif CLOS_RS07510 PF14622 Ribonuclease-III-like CLOS_RS07515 PF00583 Acetyltransferase (GNAT) family CLOS_RS07515 PF04055 Radical SAM superfamily CLOS_RS07515 PF16199 Radical_SAM C-terminal domain CLOS_RS07520 PF06470 SMC proteins Flexible Hinge Domain CLOS_RS07520 PF02463 RecF/RecN/SMC N terminal domain CLOS_RS07525 PF00448 SRP54-type protein, GTPase domain CLOS_RS07525 PF02881 SRP54-type protein, helical bundle domain CLOS_RS07530 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CLOS_RS07535 PF02978 Signal peptide binding domain CLOS_RS07535 PF02881 SRP54-type protein, helical bundle domain CLOS_RS07535 PF00448 SRP54-type protein, GTPase domain CLOS_RS07540 PF00886 Ribosomal protein S16 CLOS_RS07550 PF01782 RimM N-terminal domain CLOS_RS07550 PF05239 PRC-barrel domain CLOS_RS07555 PF01746 tRNA (Guanine-1)-methyltransferase CLOS_RS07560 PF01245 Ribosomal protein L19 CLOS_RS07565 PF01926 50S ribosome-binding GTPase CLOS_RS07570 PF01351 Ribonuclease HII CLOS_RS07575 PF02021 Uncharacterised protein family UPF0102 CLOS_RS07580 PF01078 Magnesium chelatase, subunit ChlI CLOS_RS07580 PF13335 Magnesium chelatase, subunit ChlI C-terminal CLOS_RS07585 PF02481 DNA recombination-mediator protein A CLOS_RS07585 PF18255 DNA processing protein A sterile alpha motif domain CLOS_RS07590 PF01396 Topoisomerase DNA binding C4 zinc finger CLOS_RS07590 PF01131 DNA topoisomerase CLOS_RS07590 PF01751 Toprim domain CLOS_RS07595 PF06018 CodY GAF-like domain CLOS_RS07595 PF08222 CodY helix-turn-helix domain CLOS_RS07600 PF00460 Flagella basal body rod protein CLOS_RS07605 PF00460 Flagella basal body rod protein CLOS_RS07605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLOS_RS07610 PF02049 Flagellar hook-basal body complex protein FliE CLOS_RS07615 PF08345 Flagellar M-ring protein C-terminal CLOS_RS07615 PF01514 Secretory protein of YscJ/FliF family CLOS_RS07620 PF01706 FliG C-terminal domain CLOS_RS07620 PF14842 FliG N-terminal domain CLOS_RS07620 PF14841 FliG middle domain CLOS_RS07630 PF18269 T3SS EscN ATPase C-terminal domain CLOS_RS07630 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLOS_RS07630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLOS_RS07650 PF03963 Flagellar hook capping protein - N-terminal region CLOS_RS07660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLOS_RS07660 PF00460 Flagella basal body rod protein CLOS_RS07660 PF07559 Flagellar basal body protein FlaE CLOS_RS07670 PF01618 MotA/TolQ/ExbB proton channel family CLOS_RS07675 PF00691 OmpA family CLOS_RS07675 PF13677 Membrane MotB of proton-channel complex MotA/MotB CLOS_RS07690 PF04509 CheC-like family CLOS_RS07690 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CLOS_RS07695 PF00072 Response regulator receiver domain CLOS_RS07705 PF00813 FliP family CLOS_RS07710 PF01313 Bacterial export proteins, family 3 CLOS_RS07715 PF01311 Bacterial export proteins, family 1 CLOS_RS07720 PF01312 FlhB HrpN YscU SpaS Family CLOS_RS07725 PF00771 FHIPEP family CLOS_RS07730 PF00448 SRP54-type protein, GTPase domain CLOS_RS07735 PF10609 NUBPL iron-transfer P-loop NTPase CLOS_RS07740 PF07238 PilZ domain CLOS_RS07740 PF07317 Flagellar regulator YcgR CLOS_RS07745 PF00072 Response regulator receiver domain CLOS_RS07745 PF01339 CheB methylesterase CLOS_RS07750 PF01627 Hpt domain CLOS_RS07750 PF07194 P2 response regulator binding domain CLOS_RS07750 PF02895 Signal transducing histidine kinase, homodimeric domain CLOS_RS07750 PF01584 CheW-like domain CLOS_RS07750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS07755 PF01584 CheW-like domain CLOS_RS07760 PF04509 CheC-like family CLOS_RS07765 PF03975 CheD chemotactic sensory transduction CLOS_RS07770 PF04545 Sigma-70, region 4 CLOS_RS07770 PF04542 Sigma-70 region 2 CLOS_RS07770 PF04539 Sigma-70 region 3 CLOS_RS07785 PF00318 Ribosomal protein S2 CLOS_RS07790 PF00889 Elongation factor TS CLOS_RS07795 PF00696 Amino acid kinase family CLOS_RS07800 PF01765 Ribosome recycling factor CLOS_RS07810 PF01255 Putative undecaprenyl diphosphate synthase CLOS_RS07820 PF13288 DXP reductoisomerase C-terminal domain CLOS_RS07820 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CLOS_RS07820 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CLOS_RS07825 PF17820 PDZ domain CLOS_RS07825 PF02163 Peptidase family M50 CLOS_RS07830 PF04551 GcpE protein CLOS_RS07835 PF00535 Glycosyl transferase family 2 CLOS_RS07840 PF11490 DNA polymerase III polC-type N-terminus II CLOS_RS07840 PF02811 PHP domain CLOS_RS07840 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLOS_RS07840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLOS_RS07840 PF01336 OB-fold nucleic acid binding domain CLOS_RS07840 PF00929 Exonuclease CLOS_RS07840 PF14579 Helix-hairpin-helix motif CLOS_RS07845 PF17384 RimP C-terminal SH3 domain CLOS_RS07845 PF02576 RimP N-terminal domain CLOS_RS07850 PF00575 S1 RNA binding domain CLOS_RS07850 PF13184 NusA-like KH domain CLOS_RS07850 PF08529 NusA N-terminal domain CLOS_RS07855 PF04296 Protein of unknown function (DUF448) CLOS_RS07860 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CLOS_RS07865 PF04760 Translation initiation factor IF-2, N-terminal region CLOS_RS07865 PF11987 Translation-initiation factor 2 CLOS_RS07865 PF00009 Elongation factor Tu GTP binding domain CLOS_RS07870 PF02033 Ribosome-binding factor A CLOS_RS07875 PF02272 DHHA1 domain CLOS_RS07875 PF01368 DHH family CLOS_RS07880 PF16198 tRNA pseudouridylate synthase B C-terminal domain CLOS_RS07880 PF01509 TruB family pseudouridylate synthase (N terminal domain) CLOS_RS07885 PF01687 Riboflavin kinase CLOS_RS07885 PF06574 FAD synthetase CLOS_RS07890 PF00312 Ribosomal protein S15 CLOS_RS07895 PF01138 3' exoribonuclease family, domain 1 CLOS_RS07895 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CLOS_RS07895 PF00013 KH domain CLOS_RS07895 PF00575 S1 RNA binding domain CLOS_RS07895 PF03725 3' exoribonuclease family, domain 2 CLOS_RS07900 PF01522 Polysaccharide deacetylase CLOS_RS07905 PF00675 Insulinase (Peptidase family M16) CLOS_RS07905 PF05193 Peptidase M16 inactive domain CLOS_RS07915 PF00574 Clp protease CLOS_RS07920 PF01580 FtsK/SpoIIIE family CLOS_RS07920 PF09397 Ftsk gamma domain CLOS_RS07920 PF17854 FtsK alpha domain CLOS_RS07925 PF00581 Rhodanese-like domain CLOS_RS07930 PF01066 CDP-alcohol phosphatidyltransferase CLOS_RS07935 PF00154 recA bacterial DNA recombination protein CLOS_RS07940 PF01966 HD domain CLOS_RS07940 PF00013 KH domain CLOS_RS07940 PF12072 Domain of unknown function (DUF3552) CLOS_RS07945 PF04232 Stage V sporulation protein S (SpoVS) CLOS_RS07950 PF02811 PHP domain CLOS_RS07955 PF00155 Aminotransferase class I and II CLOS_RS07960 PF00704 Glycosyl hydrolases family 18 CLOS_RS07965 PF02899 Phage integrase, N-terminal SAM-like domain CLOS_RS07965 PF00589 Phage integrase family CLOS_RS07970 PF01726 LexA DNA binding domain CLOS_RS07970 PF00717 Peptidase S24-like CLOS_RS07975 PF06838 Methionine gamma-lyase CLOS_RS07980 PF17209 Hfq protein CLOS_RS07990 PF01119 DNA mismatch repair protein, C-terminal domain CLOS_RS07990 PF08676 MutL C terminal dimerisation domain CLOS_RS07995 PF01624 MutS domain I CLOS_RS07995 PF00488 MutS domain V CLOS_RS07995 PF05192 MutS domain III CLOS_RS07995 PF05188 MutS domain II CLOS_RS07995 PF05190 MutS family domain IV CLOS_RS08000 PF00919 Uncharacterized protein family UPF0004 CLOS_RS08000 PF04055 Radical SAM superfamily CLOS_RS08000 PF01938 TRAM domain CLOS_RS08010 PF05343 M42 glutamyl aminopeptidase CLOS_RS08015 PF05343 M42 glutamyl aminopeptidase CLOS_RS08020 PF05343 M42 glutamyl aminopeptidase CLOS_RS08025 PF01739 CheR methyltransferase, SAM binding domain CLOS_RS08025 PF03705 CheR methyltransferase, all-alpha domain CLOS_RS08030 PF02401 LytB protein CLOS_RS08030 PF00575 S1 RNA binding domain CLOS_RS08035 PF02401 LytB protein CLOS_RS08040 PF01553 Acyltransferase CLOS_RS08045 PF02224 Cytidylate kinase CLOS_RS08050 PF07736 Chorismate mutase type I CLOS_RS08060 PF00300 Histidine phosphatase superfamily (branch 1) CLOS_RS08065 PF01380 SIS domain CLOS_RS08065 PF01418 Helix-turn-helix domain, rpiR family CLOS_RS08075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLOS_RS08080 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLOS_RS08080 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLOS_RS08080 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLOS_RS08095 PF00364 Biotin-requiring enzyme CLOS_RS08095 PF00682 HMGL-like CLOS_RS08095 PF02436 Conserved carboxylase domain CLOS_RS08100 PF06962 Putative rRNA methylase CLOS_RS08110 PF00849 RNA pseudouridylate synthase CLOS_RS08110 PF01479 S4 domain CLOS_RS08115 PF13932 GidA associated domain CLOS_RS08115 PF01134 Glucose inhibited division protein A CLOS_RS08125 PF00768 D-alanyl-D-alanine carboxypeptidase CLOS_RS08125 PF07943 Penicillin-binding protein 5, C-terminal domain CLOS_RS08135 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CLOS_RS08150 PF00491 Arginase family CLOS_RS08155 PF04079 Segregation and condensation complex subunit ScpB CLOS_RS08160 PF02616 Segregation and condensation protein ScpA CLOS_RS08165 PF07943 Penicillin-binding protein 5, C-terminal domain CLOS_RS08165 PF00768 D-alanyl-D-alanine carboxypeptidase CLOS_RS08170 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CLOS_RS08170 PF02885 Glycosyl transferase family, helical bundle domain CLOS_RS08170 PF00591 Glycosyl transferase family, a/b domain CLOS_RS08175 PF01048 Phosphorylase superfamily CLOS_RS08180 PF01048 Phosphorylase superfamily CLOS_RS08185 PF01676 Metalloenzyme superfamily CLOS_RS08190 PF02899 Phage integrase, N-terminal SAM-like domain CLOS_RS08190 PF00589 Phage integrase family CLOS_RS08200 PF00293 NUDIX domain CLOS_RS08215 PF00535 Glycosyl transferase family 2 CLOS_RS08230 PF02631 RecX family CLOS_RS08235 PF00072 Response regulator receiver domain CLOS_RS08235 PF08769 Sporulation initiation factor Spo0A C terminal CLOS_RS08240 PF17820 PDZ domain CLOS_RS08240 PF05580 SpoIVB peptidase S55 CLOS_RS08245 PF13476 AAA domain CLOS_RS08250 PF01316 Arginine repressor, DNA binding domain CLOS_RS08250 PF02863 Arginine repressor, C-terminal domain CLOS_RS08255 PF01728 FtsJ-like methyltransferase CLOS_RS08255 PF01479 S4 domain CLOS_RS08260 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CLOS_RS08260 PF02779 Transketolase, pyrimidine binding domain CLOS_RS08260 PF02780 Transketolase, C-terminal domain CLOS_RS08265 PF02681 Divergent PAP2 family CLOS_RS08270 PF00348 Polyprenyl synthetase CLOS_RS08275 PF02609 Exonuclease VII small subunit CLOS_RS08280 PF13742 OB-fold nucleic acid binding domain CLOS_RS08280 PF02601 Exonuclease VII, large subunit CLOS_RS08285 PF00814 Glycoprotease family CLOS_RS08290 PF01029 NusB family CLOS_RS08295 PF03780 Asp23 family, cell envelope-related function CLOS_RS08315 PF09546 Stage III sporulation protein AE (spore_III_AE) CLOS_RS08320 PF06686 Stage III sporulation protein AC/AD protein family CLOS_RS08325 PF06686 Stage III sporulation protein AC/AD protein family CLOS_RS08345 PF09285 Elongation factor P, C-terminal CLOS_RS08345 PF01132 Elongation factor P (EF-P) OB domain CLOS_RS08345 PF08207 Elongation factor P (EF-P) KOW-like domain CLOS_RS08350 PF01202 Shikimate kinase CLOS_RS08370 PF07963 Prokaryotic N-terminal methylation motif CLOS_RS08370 PF00114 Pilin (bacterial filament) CLOS_RS08375 PF00963 Cohesin domain CLOS_RS08375 PF00395 S-layer homology domain CLOS_RS08395 PF01478 Type IV leader peptidase family CLOS_RS08395 PF06750 Bacterial Peptidase A24 N-terminal domain CLOS_RS08405 PF00482 Type II secretion system (T2SS), protein F CLOS_RS08410 PF00437 Type II/IV secretion system protein CLOS_RS08415 PF00437 Type II/IV secretion system protein CLOS_RS08415 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CLOS_RS08430 PF04542 Sigma-70 region 2 CLOS_RS08430 PF04545 Sigma-70, region 4 CLOS_RS08495 PF04542 Sigma-70 region 2 CLOS_RS08495 PF04545 Sigma-70, region 4 CLOS_RS08500 PF03793 PASTA domain CLOS_RS08500 PF03717 Penicillin-binding Protein dimerisation domain CLOS_RS08500 PF00905 Penicillin binding protein transpeptidase domain CLOS_RS08505 PF00485 Phosphoribulokinase / Uridine kinase family CLOS_RS08510 PF16325 Peptidase family U32 C-terminal domain CLOS_RS08510 PF01136 Peptidase family U32 CLOS_RS08515 PF01596 O-methyltransferase CLOS_RS08530 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CLOS_RS08530 PF00753 Metallo-beta-lactamase superfamily CLOS_RS08530 PF17770 Ribonuclease J C-terminal domain CLOS_RS08535 PF01475 Ferric uptake regulator family CLOS_RS08540 PF06949 Protein of unknown function (DUF1292) CLOS_RS08545 PF03652 Holliday junction resolvase CLOS_RS08555 PF06135 IreB regulatory phosphoprotein CLOS_RS08560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLOS_RS08560 PF01411 tRNA synthetases class II (A) CLOS_RS08560 PF02272 DHHA1 domain CLOS_RS08565 PF01594 AI-2E family transporter CLOS_RS08575 PF01106 NifU-like domain CLOS_RS08575 PF01592 NifU-like N terminal domain CLOS_RS08575 PF04324 BFD-like [2Fe-2S] binding domain CLOS_RS08580 PF00266 Aminotransferase class-V CLOS_RS08585 PF02082 Transcriptional regulator CLOS_RS08590 PF00188 Cysteine-rich secretory protein family CLOS_RS08610 PF00183 Hsp90 protein CLOS_RS08620 PF11798 IMS family HHH motif CLOS_RS08620 PF00817 impB/mucB/samB family CLOS_RS08620 PF11799 impB/mucB/samB family C-terminal domain CLOS_RS08635 PF03193 RsgA GTPase CLOS_RS08640 PF01416 tRNA pseudouridine synthase CLOS_RS08645 PF00753 Metallo-beta-lactamase superfamily CLOS_RS08645 PF12706 Beta-lactamase superfamily domain CLOS_RS08670 PF05496 Holliday junction DNA helicase RuvB P-loop domain CLOS_RS08670 PF12002 MgsA AAA+ ATPase C terminal CLOS_RS08670 PF16193 AAA C-terminal domain CLOS_RS08695 PF01168 Alanine racemase, N-terminal domain CLOS_RS08700 PF13941 MutL protein CLOS_RS08705 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase CLOS_RS08705 PF02310 B12 binding domain CLOS_RS08705 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit CLOS_RS08710 PF16552 D-ornithine 4,5-aminomutase alpha-subunit CLOS_RS08715 PF00291 Pyridoxal-phosphate dependent enzyme CLOS_RS08730 PF00464 Serine hydroxymethyltransferase CLOS_RS08750 PF02127 Aminopeptidase I zinc metalloprotease (M18) CLOS_RS08765 PF00899 ThiF family CLOS_RS08775 PF01336 OB-fold nucleic acid binding domain CLOS_RS08775 PF00152 tRNA synthetases class II (D, K and N) CLOS_RS08775 PF02938 GAD domain CLOS_RS08780 PF03129 Anticodon binding domain CLOS_RS08780 PF13393 Histidyl-tRNA synthetase CLOS_RS08785 PF04055 Radical SAM superfamily CLOS_RS08790 PF00753 Metallo-beta-lactamase superfamily CLOS_RS08795 PF02580 D-Tyr-tRNA(Tyr) deacylase CLOS_RS08800 PF02824 TGS domain CLOS_RS08800 PF13291 ACT domain CLOS_RS08800 PF04607 Region found in RelA / SpoT proteins CLOS_RS08805 PF00156 Phosphoribosyl transferase domain CLOS_RS08810 PF02272 DHHA1 domain CLOS_RS08810 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CLOS_RS08810 PF01368 DHH family CLOS_RS08810 PF17768 RecJ OB domain CLOS_RS08815 PF00132 Bacterial transferase hexapeptide (six repeats) CLOS_RS08820 PF04055 Radical SAM superfamily CLOS_RS08830 PF02699 Preprotein translocase subunit CLOS_RS08835 PF01702 Queuine tRNA-ribosyltransferase CLOS_RS08840 PF02547 Queuosine biosynthesis protein CLOS_RS08845 PF08486 Stage II sporulation protein CLOS_RS08845 PF04122 Putative cell wall binding repeat 2 CLOS_RS08850 PF05491 RuvB C-terminal winged helix domain CLOS_RS08850 PF17864 RuvB AAA lid domain CLOS_RS08850 PF05496 Holliday junction DNA helicase RuvB P-loop domain CLOS_RS08855 PF01330 RuvA N terminal domain CLOS_RS08855 PF07499 RuvA, C-terminal domain CLOS_RS08860 PF02075 Crossover junction endodeoxyribonuclease RuvC CLOS_RS08865 PF05362 Lon protease (S16) C-terminal proteolytic domain CLOS_RS08865 PF13654 AAA domain CLOS_RS08880 PF02632 BioY family CLOS_RS08885 PF00849 RNA pseudouridylate synthase CLOS_RS08885 PF01479 S4 domain CLOS_RS08895 PF14827 Double sensory domain of two-component sensor kinase CLOS_RS08895 PF00672 HAMP domain CLOS_RS08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS08895 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS08895 PF13426 PAS domain CLOS_RS08900 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS08900 PF00072 Response regulator receiver domain CLOS_RS08905 PF09107 Elongation factor SelB, winged helix CLOS_RS08905 PF00009 Elongation factor Tu GTP binding domain CLOS_RS08905 PF03144 Elongation factor Tu domain 2 CLOS_RS08905 PF09105 Elongation factor SelB, winged helix CLOS_RS08905 PF09106 Elongation factor SelB, winged helix CLOS_RS08910 PF03841 L-seryl-tRNA selenium transferase CLOS_RS08910 PF12390 Selenocysteine synthase N terminal CLOS_RS08915 PF01235 Sodium:alanine symporter family CLOS_RS08920 PF00586 AIR synthase related protein, N-terminal domain CLOS_RS08920 PF02769 AIR synthase related protein, C-terminal domain CLOS_RS08930 PF07943 Penicillin-binding protein 5, C-terminal domain CLOS_RS08930 PF00768 D-alanyl-D-alanine carboxypeptidase CLOS_RS08935 PF03313 Serine dehydratase alpha chain CLOS_RS08940 PF03315 Serine dehydratase beta chain CLOS_RS08940 PF01842 ACT domain CLOS_RS08945 PF01042 Endoribonuclease L-PSP CLOS_RS08960 PF03816 Cell envelope-related transcriptional attenuator domain CLOS_RS08965 PF01966 HD domain CLOS_RS08970 PF01467 Cytidylyltransferase-like CLOS_RS08980 PF09269 Domain of unknown function (DUF1967) CLOS_RS08980 PF01018 GTP1/OBG CLOS_RS08980 PF01926 50S ribosome-binding GTPase CLOS_RS08985 PF01016 Ribosomal L27 protein CLOS_RS08995 PF00829 Ribosomal prokaryotic L21 protein CLOS_RS09000 PF10150 Ribonuclease E/G family CLOS_RS09000 PF00575 S1 RNA binding domain CLOS_RS09025 PF03776 Septum formation topological specificity factor MinE CLOS_RS09030 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLOS_RS09035 PF03775 Septum formation inhibitor MinC, C-terminal domain CLOS_RS09040 PF03717 Penicillin-binding Protein dimerisation domain CLOS_RS09040 PF00905 Penicillin binding protein transpeptidase domain CLOS_RS09060 PF04002 RadC-like JAB domain CLOS_RS09065 PF02545 Maf-like protein CLOS_RS09080 PF04060 Putative Fe-S cluster CLOS_RS09080 PF00037 4Fe-4S binding domain CLOS_RS09080 PF13187 4Fe-4S dicluster domain CLOS_RS09085 PF02508 Rnf-Nqr subunit, membrane protein CLOS_RS09090 PF02508 Rnf-Nqr subunit, membrane protein CLOS_RS09095 PF04205 FMN-binding domain CLOS_RS09100 PF03116 NQR2, RnfD, RnfE family CLOS_RS09105 PF10531 SLBB domain CLOS_RS09105 PF13375 RnfC Barrel sandwich hybrid domain CLOS_RS09105 PF13237 4Fe-4S dicluster domain CLOS_RS09105 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLOS_RS09115 PF01476 LysM domain CLOS_RS09115 PF00877 NlpC/P60 family CLOS_RS09120 PF01709 Transcriptional regulator CLOS_RS09125 PF02540 NAD synthase CLOS_RS09135 PF01925 Sulfite exporter TauE/SafE CLOS_RS09145 PF01205 Uncharacterized protein family UPF0029 CLOS_RS09145 PF09186 Domain of unknown function (DUF1949) CLOS_RS09160 PF13167 GTP-binding GTPase N-terminal CLOS_RS09160 PF16360 GTP-binding GTPase Middle Region CLOS_RS09160 PF01926 50S ribosome-binding GTPase CLOS_RS09170 PF00905 Penicillin binding protein transpeptidase domain CLOS_RS09170 PF00912 Transglycosylase CLOS_RS09175 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CLOS_RS09185 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CLOS_RS09190 PF13782 Stage V sporulation protein AB CLOS_RS09195 PF12164 Stage V sporulation protein AA CLOS_RS09200 PF04539 Sigma-70 region 3 CLOS_RS09200 PF04542 Sigma-70 region 2 CLOS_RS09200 PF04545 Sigma-70, region 4 CLOS_RS09205 PF13581 Histidine kinase-like ATPase domain CLOS_RS09210 PF01740 STAS domain CLOS_RS09215 PF00958 GMP synthase C terminal domain CLOS_RS09215 PF00117 Glutamine amidotransferase class-I CLOS_RS09215 PF03352 Methyladenine glycosylase CLOS_RS09215 PF13302 Acetyltransferase (GNAT) domain CLOS_RS09215 PF13673 Acetyltransferase (GNAT) domain CLOS_RS09220 PF00857 Isochorismatase family CLOS_RS09255 PF03600 Citrate transporter CLOS_RS09260 PF02954 Bacterial regulatory protein, Fis family CLOS_RS09260 PF00989 PAS fold CLOS_RS09260 PF00158 Sigma-54 interaction domain CLOS_RS09270 PF01554 MatE CLOS_RS09275 PF13673 Acetyltransferase (GNAT) domain CLOS_RS09285 PF00994 Probable molybdopterin binding domain CLOS_RS09290 PF01967 MoaC family CLOS_RS09295 PF02568 Thiamine biosynthesis protein (ThiI) CLOS_RS09295 PF02926 THUMP domain CLOS_RS09300 PF00266 Aminotransferase class-V CLOS_RS09310 PF17763 Glutaminase/Asparaginase C-terminal domain CLOS_RS09310 PF00710 Asparaginase, N-terminal CLOS_RS09315 PF00580 UvrD/REP helicase N-terminal domain CLOS_RS09315 PF13361 UvrD-like helicase C-terminal domain CLOS_RS09320 PF00128 Alpha amylase, catalytic domain CLOS_RS09320 PF02903 Alpha amylase, N-terminal ig-like domain CLOS_RS09320 PF00395 S-layer homology domain CLOS_RS09390 PF01381 Helix-turn-helix CLOS_RS09430 PF02899 Phage integrase, N-terminal SAM-like domain CLOS_RS09430 PF00589 Phage integrase family CLOS_RS09515 PF01515 Phosphate acetyl/butaryl transferase CLOS_RS09530 PF04055 Radical SAM superfamily CLOS_RS09530 PF02310 B12 binding domain CLOS_RS09550 PF04463 Protein of unknown function (DUF523) CLOS_RS09555 PF00488 MutS domain V CLOS_RS09555 PF01713 Smr domain CLOS_RS09560 PF00679 Elongation factor G C-terminus CLOS_RS09560 PF14492 Elongation Factor G, domain II CLOS_RS09560 PF00009 Elongation factor Tu GTP binding domain CLOS_RS09560 PF03144 Elongation factor Tu domain 2 CLOS_RS09575 PF02915 Rubrerythrin CLOS_RS09585 PF07670 Nucleoside recognition CLOS_RS09590 PF07670 Nucleoside recognition CLOS_RS09625 PF13958 Toxin ToxN, type III toxin-antitoxin system CLOS_RS09660 PF00145 C-5 cytosine-specific DNA methylase CLOS_RS09665 PF09521 NgoPII restriction endonuclease CLOS_RS09790 PF00436 Single-strand binding protein family CLOS_RS09810 PF00128 Alpha amylase, catalytic domain CLOS_RS09810 PF02903 Alpha amylase, N-terminal ig-like domain CLOS_RS09810 PF00395 S-layer homology domain CLOS_RS09840 PF10127 RNA repair pathway DNA polymerase beta family CLOS_RS09855 PF13276 HTH-like domain CLOS_RS09855 PF13333 Integrase core domain CLOS_RS09855 PF00665 Integrase core domain CLOS_RS09860 PF01527 Transposase CLOS_RS09875 PF00145 C-5 cytosine-specific DNA methylase CLOS_RS09930 PF00437 Type II/IV secretion system protein CLOS_RS09975 PF03432 Relaxase/Mobilisation nuclease domain CLOS_RS10000 PF13154 Protein of unknown function (DUF3991) CLOS_RS10010 PF02661 Fic/DOC family CLOS_RS10010 PF12728 Helix-turn-helix domain CLOS_RS10020 PF02195 ParB-like nuclease domain CLOS_RS10020 PF17762 HTH domain found in ParB protein CLOS_RS10025 PF13614 AAA domain CLOS_RS10040 PF00080 Copper/zinc superoxide dismutase (SODC) CLOS_RS10085 PF01544 CorA-like Mg2+ transporter protein CLOS_RS10090 PF00561 alpha/beta hydrolase fold CLOS_RS10090 PF08386 TAP-like protein CLOS_RS10095 PF01139 tRNA-splicing ligase RtcB CLOS_RS10100 PF00163 Ribosomal protein S4/S9 N-terminal domain CLOS_RS10100 PF01479 S4 domain CLOS_RS10105 PF01370 NAD dependent epimerase/dehydratase family CLOS_RS10110 PF05193 Peptidase M16 inactive domain CLOS_RS10110 PF08367 Peptidase M16C associated CLOS_RS10110 PF00675 Insulinase (Peptidase family M16) CLOS_RS10120 PF00994 Probable molybdopterin binding domain CLOS_RS10120 PF18146 Damage-inducible protein CinA KH domain CLOS_RS10120 PF02464 Competence-damaged protein CLOS_RS10125 PF01476 LysM domain CLOS_RS10125 PF05257 CHAP domain CLOS_RS10135 PF01476 LysM domain CLOS_RS10135 PF00704 Glycosyl hydrolases family 18 CLOS_RS10140 PF00664 ABC transporter transmembrane region CLOS_RS10140 PF00005 ABC transporter CLOS_RS10145 PF00005 ABC transporter CLOS_RS10145 PF00664 ABC transporter transmembrane region CLOS_RS10150 PF01625 Peptide methionine sulfoxide reductase CLOS_RS10165 PF00753 Metallo-beta-lactamase superfamily CLOS_RS10165 PF00258 Flavodoxin CLOS_RS10170 PF00860 Permease family CLOS_RS10175 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLOS_RS10175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLOS_RS10175 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLOS_RS10175 PF10371 Domain of unknown function CLOS_RS10175 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLOS_RS10180 PF00291 Pyridoxal-phosphate dependent enzyme CLOS_RS10180 PF14821 Threonine synthase N terminus CLOS_RS10185 PF00288 GHMP kinases N terminal domain CLOS_RS10185 PF08544 GHMP kinases C terminal CLOS_RS10190 PF13291 ACT domain CLOS_RS10195 PF01070 FMN-dependent dehydrogenase CLOS_RS10205 PF02833 DHHA2 domain CLOS_RS10205 PF01368 DHH family CLOS_RS10205 PF00571 CBS domain CLOS_RS10205 PF07085 DRTGG domain CLOS_RS10210 PF00072 Response regulator receiver domain CLOS_RS10210 PF01584 CheW-like domain CLOS_RS10235 PF02625 XdhC and CoxI family CLOS_RS10235 PF13478 XdhC Rossmann domain CLOS_RS10240 PF01554 MatE CLOS_RS10245 PF04461 Protein of unknown function (DUF520) CLOS_RS10255 PF01136 Peptidase family U32 CLOS_RS10255 PF16325 Peptidase family U32 C-terminal domain CLOS_RS10265 PF01588 Putative tRNA binding domain CLOS_RS10265 PF03147 Ferredoxin-fold anticodon binding domain CLOS_RS10265 PF03484 tRNA synthetase B5 domain CLOS_RS10265 PF03483 B3/4 domain CLOS_RS10265 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CLOS_RS10270 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CLOS_RS10270 PF01409 tRNA synthetases class II core domain (F) CLOS_RS10275 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLOS_RS10275 PF00588 SpoU rRNA Methylase family CLOS_RS10280 PF02254 TrkA-N domain CLOS_RS10280 PF02080 TrkA-C domain CLOS_RS10285 PF02386 Cation transport protein CLOS_RS10290 PF00453 Ribosomal protein L20 CLOS_RS10295 PF01632 Ribosomal protein L35 CLOS_RS10300 PF05198 Translation initiation factor IF-3, N-terminal domain CLOS_RS10300 PF00707 Translation initiation factor IF-3, C-terminal domain CLOS_RS10305 PF01434 Peptidase family M41 CLOS_RS10305 PF17862 AAA+ lid domain CLOS_RS10305 PF00004 ATPase family associated with various cellular activities (AAA) CLOS_RS10310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLOS_RS10310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLOS_RS10310 PF02824 TGS domain CLOS_RS10310 PF03129 Anticodon binding domain CLOS_RS10315 PF04286 Protein of unknown function (DUF445) CLOS_RS10330 PF17910 FeoB cytosolic helical domain CLOS_RS10330 PF07670 Nucleoside recognition CLOS_RS10330 PF07664 Ferrous iron transport protein B C terminus CLOS_RS10330 PF02421 Ferrous iron transport protein B CLOS_RS10335 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLOS_RS10345 PF00542 Ribosomal protein L7/L12 C-terminal domain CLOS_RS10345 PF16320 Ribosomal protein L7/L12 dimerisation domain CLOS_RS10350 PF13276 HTH-like domain CLOS_RS10350 PF13333 Integrase core domain CLOS_RS10350 PF00665 Integrase core domain CLOS_RS10355 PF01527 Transposase CLOS_RS10415 PF01527 Transposase CLOS_RS10420 PF13333 Integrase core domain CLOS_RS10420 PF13276 HTH-like domain CLOS_RS10420 PF00665 Integrase core domain CLOS_RS10455 PF01430 Hsp33 protein CLOS_RS10465 PF00313 'Cold-shock' DNA-binding domain CLOS_RS10470 PF13649 Methyltransferase domain CLOS_RS10480 PF04960 Glutaminase CLOS_RS10485 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLOS_RS10485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLOS_RS10485 PF02824 TGS domain CLOS_RS10485 PF03129 Anticodon binding domain CLOS_RS10490 PF00571 CBS domain CLOS_RS10495 PF10502 Signal peptidase, peptidase S26 CLOS_RS10505 PF13367 PrsW family intramembrane metalloprotease CLOS_RS10515 PF00156 Phosphoribosyl transferase domain CLOS_RS10525 PF01225 Mur ligase family, catalytic domain CLOS_RS10525 PF02875 Mur ligase family, glutamate ligase domain CLOS_RS10525 PF08245 Mur ligase middle domain CLOS_RS10530 PF01522 Polysaccharide deacetylase CLOS_RS10530 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CLOS_RS10535 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CLOS_RS10540 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS10545 PF00571 CBS domain CLOS_RS10545 PF00005 ABC transporter CLOS_RS10550 PF12802 MarR family CLOS_RS10555 PF00155 Aminotransferase class I and II CLOS_RS10560 PF02690 Na+/Pi-cotransporter CLOS_RS10565 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLOS_RS10580 PF02875 Mur ligase family, glutamate ligase domain CLOS_RS10580 PF08245 Mur ligase middle domain CLOS_RS10585 PF00145 C-5 cytosine-specific DNA methylase CLOS_RS10605 PF13361 UvrD-like helicase C-terminal domain CLOS_RS10605 PF12705 PD-(D/E)XK nuclease superfamily CLOS_RS10605 PF00580 UvrD/REP helicase N-terminal domain CLOS_RS10610 PF00012 Hsp70 protein CLOS_RS10625 PF10458 Valyl tRNA synthetase tRNA binding arm CLOS_RS10625 PF00133 tRNA synthetases class I (I, L, M and V) CLOS_RS10625 PF08264 Anticodon-binding domain of tRNA CLOS_RS10630 PF01066 CDP-alcohol phosphatidyltransferase CLOS_RS10665 PF00293 NUDIX domain CLOS_RS10665 PF13344 Haloacid dehalogenase-like hydrolase CLOS_RS10680 PF13545 Crp-like helix-turn-helix domain CLOS_RS10680 PF00027 Cyclic nucleotide-binding domain CLOS_RS10685 PF00403 Heavy-metal-associated domain CLOS_RS10690 PF00403 Heavy-metal-associated domain CLOS_RS10695 PF03313 Serine dehydratase alpha chain CLOS_RS10700 PF02954 Bacterial regulatory protein, Fis family CLOS_RS10700 PF00158 Sigma-54 interaction domain CLOS_RS10700 PF13188 PAS domain CLOS_RS10710 PF00689 Cation transporting ATPase, C-terminus CLOS_RS10710 PF00690 Cation transporter/ATPase, N-terminus CLOS_RS10715 PF02567 Phenazine biosynthesis-like protein CLOS_RS10720 PF17954 Quercetinase C-terminal cupin domain CLOS_RS10720 PF02678 Pirin CLOS_RS10725 PF01641 SelR domain CLOS_RS10755 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLOS_RS10770 PF14667 Polysaccharide biosynthesis C-terminal domain CLOS_RS10770 PF01943 Polysaccharide biosynthesis protein CLOS_RS10775 PF00005 ABC transporter CLOS_RS10775 PF16326 ABC transporter C-terminal domain CLOS_RS10775 PF12848 ABC transporter CLOS_RS10785 PF01177 Asp/Glu/Hydantoin racemase CLOS_RS10805 PF01471 Putative peptidoglycan binding domain CLOS_RS10805 PF07486 Cell Wall Hydrolase CLOS_RS10810 PF00571 CBS domain CLOS_RS10810 PF01769 Divalent cation transporter CLOS_RS10810 PF03448 MgtE intracellular N domain CLOS_RS10815 PF01098 Cell cycle protein CLOS_RS10820 PF02743 Cache domain CLOS_RS10820 PF00672 HAMP domain CLOS_RS10820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS10825 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLOS_RS10855 PF00005 ABC transporter CLOS_RS10860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS10865 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS10865 PF00072 Response regulator receiver domain CLOS_RS10870 PF07136 Protein of unknown function (DUF1385) CLOS_RS10885 PF01523 Putative modulator of DNA gyrase CLOS_RS10895 PF00210 Ferritin-like domain CLOS_RS10910 PF00005 ABC transporter CLOS_RS10915 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS10945 PF00672 HAMP domain CLOS_RS10945 PF07228 Stage II sporulation protein E (SpoIIE) CLOS_RS10950 PF00890 FAD binding domain CLOS_RS10950 PF04205 FMN-binding domain CLOS_RS10960 PF04205 FMN-binding domain CLOS_RS10960 PF00890 FAD binding domain CLOS_RS10965 PF04205 FMN-binding domain CLOS_RS10970 PF02424 ApbE family CLOS_RS10980 PF02875 Mur ligase family, glutamate ligase domain CLOS_RS10980 PF08245 Mur ligase middle domain CLOS_RS10980 PF08443 RimK-like ATP-grasp domain CLOS_RS10985 PF03575 Peptidase family S51 CLOS_RS10990 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CLOS_RS10990 PF01522 Polysaccharide deacetylase CLOS_RS10995 PF02690 Na+/Pi-cotransporter CLOS_RS11000 PF00550 Phosphopantetheine attachment site CLOS_RS11015 PF12804 MobA-like NTP transferase domain CLOS_RS11020 PF13509 S1 domain CLOS_RS11020 PF17783 CvfB-like winged helix domain CLOS_RS11040 PF02645 Uncharacterised protein, DegV family COG1307 CLOS_RS11050 PF02390 Putative methyltransferase CLOS_RS11065 PF00579 tRNA synthetases class I (W and Y) CLOS_RS11070 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLOS_RS11070 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLOS_RS11070 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLOS_RS11075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLOS_RS11085 PF01268 Formate--tetrahydrofolate ligase CLOS_RS11090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS11090 PF00672 HAMP domain CLOS_RS11090 PF02743 Cache domain CLOS_RS11110 PF00027 Cyclic nucleotide-binding domain CLOS_RS11110 PF13545 Crp-like helix-turn-helix domain CLOS_RS11120 PF00950 ABC 3 transport family CLOS_RS11125 PF00005 ABC transporter CLOS_RS11130 PF01297 Zinc-uptake complex component A periplasmic CLOS_RS11130 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CLOS_RS11135 PF00902 Sec-independent protein translocase protein (TatC) CLOS_RS11140 PF02464 Competence-damaged protein CLOS_RS11140 PF00994 Probable molybdopterin binding domain CLOS_RS11145 PF01645 Conserved region in glutamate synthase CLOS_RS11145 PF13187 4Fe-4S dicluster domain CLOS_RS11150 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CLOS_RS11150 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CLOS_RS11155 PF12800 4Fe-4S binding domain CLOS_RS11155 PF13247 4Fe-4S dicluster domain CLOS_RS11160 PF02625 XdhC and CoxI family CLOS_RS11160 PF13478 XdhC Rossmann domain CLOS_RS11165 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CLOS_RS11165 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CLOS_RS11170 PF12800 4Fe-4S binding domain CLOS_RS11170 PF13247 4Fe-4S dicluster domain CLOS_RS11180 PF02416 mttA/Hcf106 family CLOS_RS11185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLOS_RS11185 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLOS_RS11190 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLOS_RS11195 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CLOS_RS11200 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLOS_RS11215 PF13396 Phospholipase_D-nuclease N-terminal CLOS_RS11215 PF13091 PLD-like domain CLOS_RS11220 PF00990 Diguanylate cyclase, GGDEF domain CLOS_RS11220 PF07694 5TMR of 5TMR-LYT CLOS_RS11225 PF01131 DNA topoisomerase CLOS_RS11225 PF01751 Toprim domain CLOS_RS11235 PF02875 Mur ligase family, glutamate ligase domain CLOS_RS11235 PF08245 Mur ligase middle domain CLOS_RS11240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLOS_RS11240 PF00005 ABC transporter CLOS_RS11245 PF00005 ABC transporter CLOS_RS11245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLOS_RS11250 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS11255 PF12911 N-terminal TM domain of oligopeptide transport permease C CLOS_RS11255 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS11260 PF00403 Heavy-metal-associated domain CLOS_RS11265 PF01022 Bacterial regulatory protein, arsR family CLOS_RS11275 PF00672 HAMP domain CLOS_RS11275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS11275 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS11280 PF00072 Response regulator receiver domain CLOS_RS11280 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS11290 PF00301 Rubredoxin CLOS_RS11300 PF01926 50S ribosome-binding GTPase CLOS_RS11305 PF05362 Lon protease (S16) C-terminal proteolytic domain CLOS_RS11305 PF02190 ATP-dependent protease La (LON) substrate-binding domain CLOS_RS11305 PF00004 ATPase family associated with various cellular activities (AAA) CLOS_RS11310 PF00004 ATPase family associated with various cellular activities (AAA) CLOS_RS11310 PF05362 Lon protease (S16) C-terminal proteolytic domain CLOS_RS11315 PF06689 ClpX C4-type zinc finger CLOS_RS11315 PF10431 C-terminal, D2-small domain, of ClpB protein CLOS_RS11315 PF07724 AAA domain (Cdc48 subfamily) CLOS_RS11320 PF00574 Clp protease CLOS_RS11325 PF05698 Bacterial trigger factor protein (TF) C-terminus CLOS_RS11325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLOS_RS11325 PF05697 Bacterial trigger factor protein (TF) CLOS_RS11330 PF00313 'Cold-shock' DNA-binding domain CLOS_RS11335 PF00027 Cyclic nucleotide-binding domain CLOS_RS11335 PF13545 Crp-like helix-turn-helix domain CLOS_RS11340 PF00753 Metallo-beta-lactamase superfamily CLOS_RS11340 PF00258 Flavodoxin CLOS_RS11350 PF00696 Amino acid kinase family CLOS_RS11360 PF04542 Sigma-70 region 2 CLOS_RS11360 PF08281 Sigma-70, region 4 CLOS_RS11370 PF04073 Aminoacyl-tRNA editing domain CLOS_RS11375 PF03447 Homoserine dehydrogenase, NAD binding domain CLOS_RS11375 PF00742 Homoserine dehydrogenase CLOS_RS11375 PF01842 ACT domain CLOS_RS11380 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLOS_RS11380 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLOS_RS11390 PF00156 Phosphoribosyl transferase domain CLOS_RS11395 PF01180 Dihydroorotate dehydrogenase CLOS_RS11400 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CLOS_RS11405 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CLOS_RS11410 PF01979 Amidohydrolase family CLOS_RS11420 PF04239 Protein of unknown function (DUF421) CLOS_RS11425 PF00133 tRNA synthetases class I (I, L, M and V) CLOS_RS11425 PF08264 Anticodon-binding domain of tRNA CLOS_RS11430 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLOS_RS11440 PF00990 Diguanylate cyclase, GGDEF domain CLOS_RS11455 PF07670 Nucleoside recognition CLOS_RS11460 PF07670 Nucleoside recognition CLOS_RS11465 PF00672 HAMP domain CLOS_RS11465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS11465 PF02743 Cache domain CLOS_RS11485 PF00300 Histidine phosphatase superfamily (branch 1) CLOS_RS11490 PF02654 Cobalamin-5-phosphate synthase CLOS_RS11495 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CLOS_RS11500 PF00155 Aminotransferase class I and II CLOS_RS11515 PF09370 Phosphoenolpyruvate hydrolase-like CLOS_RS11520 PF00005 ABC transporter CLOS_RS11525 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS11530 PF04346 Ethanolamine utilisation protein, EutH CLOS_RS11535 PF01520 N-acetylmuramoyl-L-alanine amidase CLOS_RS11540 PF00258 Flavodoxin CLOS_RS11560 PF00586 AIR synthase related protein, N-terminal domain CLOS_RS11560 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CLOS_RS11560 PF02769 AIR synthase related protein, C-terminal domain CLOS_RS11565 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CLOS_RS11580 PF12849 PBP superfamily domain CLOS_RS11620 PF00665 Integrase core domain CLOS_RS11620 PF13276 HTH-like domain CLOS_RS11620 PF13333 Integrase core domain CLOS_RS11625 PF01527 Transposase CLOS_RS11640 PF01695 IstB-like ATP binding protein CLOS_RS11685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS11685 PF00989 PAS fold CLOS_RS11685 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CLOS_RS11685 PF17203 Single cache domain 3 CLOS_RS11690 PF00072 Response regulator receiver domain CLOS_RS11690 PF04397 LytTr DNA-binding domain CLOS_RS11700 PF01568 Molydopterin dinucleotide binding domain CLOS_RS11700 PF00384 Molybdopterin oxidoreductase CLOS_RS11700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLOS_RS11705 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLOS_RS11705 PF01568 Molydopterin dinucleotide binding domain CLOS_RS11705 PF00384 Molybdopterin oxidoreductase CLOS_RS11705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLOS_RS11705 PF13237 4Fe-4S dicluster domain CLOS_RS11710 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CLOS_RS11710 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLOS_RS11710 PF00384 Molybdopterin oxidoreductase CLOS_RS11715 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLOS_RS11715 PF00037 4Fe-4S binding domain CLOS_RS11715 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLOS_RS11735 PF12826 Helix-hairpin-helix motif CLOS_RS11735 PF08459 UvrC Helix-hairpin-helix N-terminal CLOS_RS11735 PF02151 UvrB/uvrC motif CLOS_RS11735 PF01541 GIY-YIG catalytic domain CLOS_RS11745 PF17760 UvrA interaction domain CLOS_RS11745 PF17755 UvrA DNA-binding domain CLOS_RS11750 PF17757 UvrB interaction domain CLOS_RS11750 PF12344 Ultra-violet resistance protein B CLOS_RS11750 PF02151 UvrB/uvrC motif CLOS_RS11750 PF00271 Helicase conserved C-terminal domain CLOS_RS11750 PF04851 Type III restriction enzyme, res subunit CLOS_RS11755 PF13180 PDZ domain CLOS_RS11755 PF03572 Peptidase family S41 CLOS_RS11760 PF01551 Peptidase family M23 CLOS_RS11765 PF02687 FtsX-like permease family CLOS_RS11765 PF18075 FtsX extracellular domain CLOS_RS11770 PF00005 ABC transporter CLOS_RS11775 PF01812 5-formyltetrahydrofolate cyclo-ligase family CLOS_RS11790 PF02780 Transketolase, C-terminal domain CLOS_RS11790 PF02779 Transketolase, pyrimidine binding domain CLOS_RS11795 PF00456 Transketolase, thiamine diphosphate binding domain CLOS_RS11800 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLOS_RS11800 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CLOS_RS11805 PF03808 Glycosyl transferase WecB/TagA/CpsF family CLOS_RS11825 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CLOS_RS11835 PF01168 Alanine racemase, N-terminal domain CLOS_RS11835 PF00842 Alanine racemase, C-terminal domain CLOS_RS11840 PF01648 4'-phosphopantetheinyl transferase superfamily CLOS_RS11870 PF12728 Helix-turn-helix domain CLOS_RS11870 PF12727 PBP superfamily domain CLOS_RS11875 PF00005 ABC transporter CLOS_RS11880 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS11895 PF13726 Na+-H+ antiporter family CLOS_RS11895 PF03553 Na+/H+ antiporter family CLOS_RS11900 PF13520 Amino acid permease CLOS_RS11905 PF13175 AAA ATPase domain CLOS_RS11910 PF00149 Calcineurin-like phosphoesterase CLOS_RS11910 PF12320 Type 5 capsule protein repressor C-terminal domain CLOS_RS11915 PF12705 PD-(D/E)XK nuclease superfamily CLOS_RS11915 PF00580 UvrD/REP helicase N-terminal domain CLOS_RS11915 PF13361 UvrD-like helicase C-terminal domain CLOS_RS11920 PF14815 NUDIX domain CLOS_RS11920 PF00730 HhH-GPD superfamily base excision DNA repair protein CLOS_RS11960 PF12848 ABC transporter CLOS_RS11960 PF16326 ABC transporter C-terminal domain CLOS_RS11960 PF00005 ABC transporter CLOS_RS11970 PF12705 PD-(D/E)XK nuclease superfamily CLOS_RS11980 PF08903 Domain of unknown function (DUF1846) CLOS_RS11985 PF03601 Conserved hypothetical protein 698 CLOS_RS11990 PF00155 Aminotransferase class I and II CLOS_RS11995 PF07670 Nucleoside recognition CLOS_RS12000 PF00465 Iron-containing alcohol dehydrogenase CLOS_RS12005 PF00890 FAD binding domain CLOS_RS12005 PF04205 FMN-binding domain CLOS_RS12005 PF03358 NADPH-dependent FMN reductase CLOS_RS12015 PF02163 Peptidase family M50 CLOS_RS12020 PF00004 ATPase family associated with various cellular activities (AAA) CLOS_RS12020 PF17862 AAA+ lid domain CLOS_RS12020 PF06480 FtsH Extracellular CLOS_RS12020 PF01434 Peptidase family M41 CLOS_RS12030 PF03323 Bacillus/Clostridium GerA spore germination protein CLOS_RS12040 PF05343 M42 glutamyl aminopeptidase CLOS_RS12045 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLOS_RS12055 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLOS_RS12055 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLOS_RS12060 PF03372 Endonuclease/Exonuclease/phosphatase family CLOS_RS12075 PF12833 Helix-turn-helix domain CLOS_RS12075 PF06445 GyrI-like small molecule binding domain CLOS_RS12100 PF13519 von Willebrand factor type A domain CLOS_RS12100 PF17863 AAA lid domain CLOS_RS12100 PF07728 AAA domain (dynein-related subfamily) CLOS_RS12105 PF17863 AAA lid domain CLOS_RS12105 PF01078 Magnesium chelatase, subunit ChlI CLOS_RS12110 PF11965 Domain of unknown function (DUF3479) CLOS_RS12110 PF02514 CobN/Magnesium Chelatase CLOS_RS12115 PF01032 FecCD transport family CLOS_RS12120 PF01497 Periplasmic binding protein CLOS_RS12125 PF02915 Rubrerythrin CLOS_RS12130 PF02666 Phosphatidylserine decarboxylase CLOS_RS12150 PF01487 Type I 3-dehydroquinase CLOS_RS12155 PF03060 Nitronate monooxygenase CLOS_RS12160 PF01212 Beta-eliminating lyase CLOS_RS12165 PF00271 Helicase conserved C-terminal domain CLOS_RS12165 PF00270 DEAD/DEAH box helicase CLOS_RS12170 PF00152 tRNA synthetases class II (D, K and N) CLOS_RS12175 PF03466 LysR substrate binding domain CLOS_RS12175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLOS_RS12185 PF00375 Sodium:dicarboxylate symporter family CLOS_RS12195 PF01522 Polysaccharide deacetylase CLOS_RS12195 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CLOS_RS12205 PF01327 Polypeptide deformylase CLOS_RS12220 PF01098 Cell cycle protein CLOS_RS12225 PF03551 Transcriptional regulator PadR-like family CLOS_RS12230 PF07690 Major Facilitator Superfamily CLOS_RS12240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLOS_RS12255 PF01910 Thiamine-binding protein CLOS_RS12260 PF01470 Pyroglutamyl peptidase CLOS_RS12265 PF01144 Coenzyme A transferase CLOS_RS12270 PF01144 Coenzyme A transferase CLOS_RS12275 PF00989 PAS fold CLOS_RS12275 PF00158 Sigma-54 interaction domain CLOS_RS12275 PF02954 Bacterial regulatory protein, Fis family CLOS_RS12280 PF02335 Cytochrome c552 CLOS_RS12285 PF05140 ResB-like family CLOS_RS12290 PF01578 Cytochrome C assembly protein CLOS_RS12300 PF01743 Poly A polymerase head domain CLOS_RS12300 PF12627 Probable RNA and SrmB- binding site of polymerase A CLOS_RS12300 PF13735 tRNA nucleotidyltransferase domain 2 putative CLOS_RS12305 PF04073 Aminoacyl-tRNA editing domain CLOS_RS12310 PF07786 Protein of unknown function (DUF1624) CLOS_RS12310 PF04235 Protein of unknown function (DUF418) CLOS_RS12315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS12315 PF02743 Cache domain CLOS_RS12315 PF00672 HAMP domain CLOS_RS12320 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CLOS_RS12320 PF00753 Metallo-beta-lactamase superfamily CLOS_RS12320 PF10996 Beta-Casp domain CLOS_RS12325 PF01594 AI-2E family transporter CLOS_RS12330 PF00933 Glycosyl hydrolase family 3 N terminal domain CLOS_RS12330 PF01915 Glycosyl hydrolase family 3 C-terminal domain CLOS_RS12340 PF01048 Phosphorylase superfamily CLOS_RS12345 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLOS_RS12345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLOS_RS12350 PF02653 Branched-chain amino acid transport system / permease component CLOS_RS12355 PF02653 Branched-chain amino acid transport system / permease component CLOS_RS12360 PF00005 ABC transporter CLOS_RS12365 PF02608 ABC transporter substrate-binding protein PnrA-like CLOS_RS12375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLOS_RS12375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLOS_RS12375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLOS_RS12375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLOS_RS12380 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CLOS_RS12385 PF00672 HAMP domain CLOS_RS12385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS12390 PF00936 BMC domain CLOS_RS12395 PF06130 Phosphate propanoyltransferase CLOS_RS12400 PF00171 Aldehyde dehydrogenase family CLOS_RS12400 PF00465 Iron-containing alcohol dehydrogenase CLOS_RS12405 PF00936 BMC domain CLOS_RS12410 PF06249 Ethanolamine utilisation protein EutQ CLOS_RS12420 PF13237 4Fe-4S dicluster domain CLOS_RS12420 PF13375 RnfC Barrel sandwich hybrid domain CLOS_RS12420 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLOS_RS12420 PF10531 SLBB domain CLOS_RS12425 PF03319 Ethanolamine utilisation protein EutN/carboxysome CLOS_RS12440 PF10662 Ethanolamine utilisation - propanediol utilisation CLOS_RS12445 PF00936 BMC domain CLOS_RS12450 PF13187 4Fe-4S dicluster domain CLOS_RS12450 PF04055 Radical SAM superfamily CLOS_RS12455 PF01228 Glycine radical CLOS_RS12455 PF02901 Pyruvate formate lyase-like CLOS_RS12460 PF00465 Iron-containing alcohol dehydrogenase CLOS_RS12460 PF00171 Aldehyde dehydrogenase family CLOS_RS12465 PF00936 BMC domain CLOS_RS12470 PF00936 BMC domain CLOS_RS12490 PF00171 Aldehyde dehydrogenase family CLOS_RS12490 PF00465 Iron-containing alcohol dehydrogenase CLOS_RS12495 PF07694 5TMR of 5TMR-LYT CLOS_RS12495 PF06580 Histidine kinase CLOS_RS12500 PF12833 Helix-turn-helix domain CLOS_RS12500 PF10114 Sensory domain found in PocR CLOS_RS12530 PF00871 Acetokinase family CLOS_RS12535 PF01515 Phosphate acetyl/butaryl transferase CLOS_RS12540 PF00989 PAS fold CLOS_RS12540 PF00158 Sigma-54 interaction domain CLOS_RS12540 PF02954 Bacterial regulatory protein, Fis family CLOS_RS12550 PF02457 DisA bacterial checkpoint controller nucleotide-binding CLOS_RS12555 PF00202 Aminotransferase class-III CLOS_RS12560 PF00202 Aminotransferase class-III CLOS_RS12835 PF00462 Glutaredoxin CLOS_RS12845 PF04239 Protein of unknown function (DUF421) CLOS_RS12850 PF01814 Hemerythrin HHE cation binding domain CLOS_RS12850 PF04405 Domain of Unknown function (DUF542) CLOS_RS12855 PF01595 Cyclin M transmembrane N-terminal domain CLOS_RS12855 PF00571 CBS domain CLOS_RS12855 PF03471 Transporter associated domain CLOS_RS12860 PF03734 L,D-transpeptidase catalytic domain CLOS_RS12860 PF01476 LysM domain CLOS_RS12865 PF00005 ABC transporter CLOS_RS12870 PF01032 FecCD transport family CLOS_RS12875 PF01032 FecCD transport family CLOS_RS12890 PF01569 PAP2 superfamily CLOS_RS12895 PF12849 PBP superfamily domain CLOS_RS12900 PF03063 Prismane/CO dehydrogenase family CLOS_RS12940 PF04199 Putative cyclase CLOS_RS12945 PF05853 beta-keto acid cleavage enzyme CLOS_RS12950 PF00108 Thiolase, N-terminal domain CLOS_RS12950 PF02803 Thiolase, C-terminal domain CLOS_RS12955 PF00158 Sigma-54 interaction domain CLOS_RS12955 PF00989 PAS fold CLOS_RS12955 PF02954 Bacterial regulatory protein, Fis family CLOS_RS12960 PF01909 Nucleotidyltransferase domain CLOS_RS12960 PF13427 Domain of unknown function (DUF4111) CLOS_RS12965 PF00118 TCP-1/cpn60 chaperonin family CLOS_RS12970 PF00166 Chaperonin 10 Kd subunit CLOS_RS13000 PF00005 ABC transporter CLOS_RS13005 PF01180 Dihydroorotate dehydrogenase CLOS_RS13010 PF00356 Bacterial regulatory proteins, lacI family CLOS_RS13015 PF07969 Amidohydrolase family CLOS_RS13020 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CLOS_RS13025 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CLOS_RS13025 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CLOS_RS13035 PF12838 4Fe-4S dicluster domain CLOS_RS13050 PF06971 Putative DNA-binding protein N-terminus CLOS_RS13050 PF02629 CoA binding domain CLOS_RS13055 PF12848 ABC transporter CLOS_RS13055 PF00005 ABC transporter CLOS_RS13055 PF16326 ABC transporter C-terminal domain CLOS_RS13060 PF00814 Glycoprotease family CLOS_RS13065 PF00583 Acetyltransferase (GNAT) family CLOS_RS13070 PF00814 Glycoprotease family CLOS_RS13075 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CLOS_RS13085 PF00072 Response regulator receiver domain CLOS_RS13085 PF12833 Helix-turn-helix domain CLOS_RS13090 PF08446 PAS fold CLOS_RS13090 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS13090 PF00360 Phytochrome region CLOS_RS13090 PF01590 GAF domain CLOS_RS13090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS13095 PF12822 ECF transporter, substrate-specific component CLOS_RS13105 PF01979 Amidohydrolase family CLOS_RS13110 PF00575 S1 RNA binding domain CLOS_RS13110 PF17674 HHH domain CLOS_RS13110 PF09371 Tex-like protein N-terminal domain CLOS_RS13110 PF16921 Tex protein YqgF-like domain CLOS_RS13120 PF00669 Bacterial flagellin N-terminal helical region CLOS_RS13120 PF00700 Bacterial flagellin C-terminal helical region CLOS_RS13125 PF01312 FlhB HrpN YscU SpaS Family CLOS_RS13140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS13140 PF00672 HAMP domain CLOS_RS13140 PF02743 Cache domain CLOS_RS13145 PF00472 RF-1 domain CLOS_RS13145 PF03462 PCRF domain CLOS_RS13150 PF07516 SecA Wing and Scaffold domain CLOS_RS13150 PF02810 SEC-C motif CLOS_RS13150 PF01043 SecA preprotein cross-linking domain CLOS_RS13150 PF07517 SecA DEAD-like domain CLOS_RS13160 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CLOS_RS13160 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CLOS_RS13170 PF02561 Flagellar protein FliS CLOS_RS13190 PF18267 Rubredoxin NAD+ reductase C-terminal domain CLOS_RS13190 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLOS_RS13190 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLOS_RS13190 PF04324 BFD-like [2Fe-2S] binding domain CLOS_RS13190 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLOS_RS13195 PF02599 Global regulator protein family CLOS_RS13200 PF02623 FliW protein CLOS_RS13205 PF02954 Bacterial regulatory protein, Fis family CLOS_RS13205 PF00158 Sigma-54 interaction domain CLOS_RS13205 PF13426 PAS domain CLOS_RS13210 PF03553 Na+/H+ antiporter family CLOS_RS13215 PF00005 ABC transporter CLOS_RS13220 PF00005 ABC transporter CLOS_RS13220 PF12399 Branched-chain amino acid ATP-binding cassette transporter CLOS_RS13225 PF02653 Branched-chain amino acid transport system / permease component CLOS_RS13225 PF11862 Domain of unknown function (DUF3382) CLOS_RS13230 PF02653 Branched-chain amino acid transport system / permease component CLOS_RS13255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLOS_RS13270 PF03102 NeuB family CLOS_RS13270 PF08666 SAF domain CLOS_RS13285 PF02348 Cytidylyltransferase CLOS_RS13290 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLOS_RS13295 PF02719 Polysaccharide biosynthesis protein CLOS_RS13310 PF00669 Bacterial flagellin N-terminal helical region CLOS_RS13310 PF00700 Bacterial flagellin C-terminal helical region CLOS_RS13315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS13315 PF02743 Cache domain CLOS_RS13315 PF00672 HAMP domain CLOS_RS13330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLOS_RS13330 PF00460 Flagella basal body rod protein CLOS_RS13350 PF00156 Phosphoribosyl transferase domain CLOS_RS13355 PF13538 UvrD-like helicase C-terminal domain CLOS_RS13355 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CLOS_RS13355 PF14490 Helix-hairpin-helix containing domain CLOS_RS13375 PF00438 S-adenosylmethionine synthetase, N-terminal domain CLOS_RS13375 PF02772 S-adenosylmethionine synthetase, central domain CLOS_RS13375 PF02773 S-adenosylmethionine synthetase, C-terminal domain CLOS_RS13390 PF06949 Protein of unknown function (DUF1292) CLOS_RS13395 PF00990 Diguanylate cyclase, GGDEF domain CLOS_RS13395 PF03707 Bacterial signalling protein N terminal repeat CLOS_RS13395 PF00563 EAL domain CLOS_RS13400 PF07977 FabA-like domain CLOS_RS13405 PF13416 Bacterial extracellular solute-binding protein CLOS_RS13410 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS13415 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS13420 PF08402 TOBE domain CLOS_RS13420 PF00005 ABC transporter CLOS_RS13430 PF02308 MgtC family CLOS_RS13435 PF02447 GntP family permease CLOS_RS13440 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CLOS_RS13445 PF07005 Sugar-binding N-terminal domain CLOS_RS13445 PF17042 Nucleotide-binding C-terminal domain CLOS_RS13450 PF00455 DeoR C terminal sensor domain CLOS_RS13450 PF08220 DeoR-like helix-turn-helix domain CLOS_RS13455 PF05257 CHAP domain CLOS_RS13455 PF01476 LysM domain CLOS_RS13460 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CLOS_RS13460 PF10135 Rod binding protein CLOS_RS13465 PF00460 Flagella basal body rod protein CLOS_RS13465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLOS_RS13470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLOS_RS13470 PF00460 Flagella basal body rod protein CLOS_RS13480 PF12116 Stage III sporulation protein D CLOS_RS13490 PF08486 Stage II sporulation protein CLOS_RS13495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLOS_RS13515 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CLOS_RS13515 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CLOS_RS13520 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLOS_RS13520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLOS_RS13525 PF00231 ATP synthase CLOS_RS13530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLOS_RS13530 PF00306 ATP synthase alpha/beta chain, C terminal domain CLOS_RS13530 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLOS_RS13535 PF00213 ATP synthase delta (OSCP) subunit CLOS_RS13540 PF00430 ATP synthase B/B' CF(0) CLOS_RS13545 PF00137 ATP synthase subunit C CLOS_RS13550 PF00119 ATP synthase A chain CLOS_RS13565 PF02350 UDP-N-acetylglucosamine 2-epimerase CLOS_RS13570 PF00953 Glycosyl transferase family 4 CLOS_RS13575 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLOS_RS13585 PF02502 Ribose/Galactose Isomerase CLOS_RS13590 PF01451 Low molecular weight phosphotyrosine protein phosphatase CLOS_RS13595 PF03481 Putative GTP-binding controlling metal-binding CLOS_RS13595 PF01300 Telomere recombination CLOS_RS13600 PF00905 Penicillin binding protein transpeptidase domain CLOS_RS13605 PF01098 Cell cycle protein CLOS_RS13610 PF16697 Inner membrane component of T3SS, cytoplasmic domain CLOS_RS13615 PF02535 ZIP Zinc transporter CLOS_RS13620 PF00472 RF-1 domain CLOS_RS13620 PF03462 PCRF domain CLOS_RS13625 PF17827 PrmC N-terminal domain CLOS_RS13625 PF05175 Methyltransferase small domain CLOS_RS13630 PF07136 Protein of unknown function (DUF1385) CLOS_RS13645 PF00005 ABC transporter CLOS_RS13655 PF08264 Anticodon-binding domain of tRNA CLOS_RS13655 PF00133 tRNA synthetases class I (I, L, M and V) CLOS_RS13655 PF13603 Leucyl-tRNA synthetase, Domain 2 CLOS_RS13655 PF09334 tRNA synthetases class I (M) CLOS_RS13665 PF00265 Thymidine kinase CLOS_RS13670 PF01197 Ribosomal protein L31 CLOS_RS13675 PF07497 Rho termination factor, RNA-binding domain CLOS_RS13675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLOS_RS13675 PF07498 Rho termination factor, N-terminal domain CLOS_RS13680 PF00005 ABC transporter CLOS_RS13685 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS13690 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLOS_RS13695 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CLOS_RS13700 PF00923 Transaldolase/Fructose-6-phosphate aldolase CLOS_RS13705 PF05853 beta-keto acid cleavage enzyme CLOS_RS13710 PF03061 Thioesterase superfamily CLOS_RS13715 PF00209 Sodium:neurotransmitter symporter family CLOS_RS13720 PF00209 Sodium:neurotransmitter symporter family CLOS_RS13725 PF00963 Cohesin domain CLOS_RS13725 PF00395 S-layer homology domain CLOS_RS13730 PF00395 S-layer homology domain CLOS_RS13765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS13765 PF00672 HAMP domain CLOS_RS13765 PF02743 Cache domain CLOS_RS13775 PF00873 AcrB/AcrD/AcrF family CLOS_RS13780 PF00529 HlyD membrane-fusion protein of T1SS CLOS_RS13780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLOS_RS13790 PF12704 MacB-like periplasmic core domain CLOS_RS13790 PF00005 ABC transporter CLOS_RS13790 PF02687 FtsX-like permease family CLOS_RS13800 PF00005 ABC transporter CLOS_RS13805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLOS_RS13805 PF00529 HlyD membrane-fusion protein of T1SS CLOS_RS13815 PF00005 ABC transporter CLOS_RS13820 PF00440 Bacterial regulatory proteins, tetR family CLOS_RS13820 PF08361 MAATS-type transcriptional repressor, C-terminal region CLOS_RS13835 PF00589 Phage integrase family CLOS_RS13835 PF02899 Phage integrase, N-terminal SAM-like domain CLOS_RS13845 PF00872 Transposase, Mutator family CLOS_RS13855 PF00395 S-layer homology domain CLOS_RS13860 PF00395 S-layer homology domain CLOS_RS13865 PF07228 Stage II sporulation protein E (SpoIIE) CLOS_RS13870 PF02541 Ppx/GppA phosphatase family CLOS_RS13875 PF00575 S1 RNA binding domain CLOS_RS13890 PF07873 YabP family CLOS_RS13895 PF08486 Stage II sporulation protein CLOS_RS13900 PF01479 S4 domain CLOS_RS13905 PF00216 Bacterial DNA-binding protein CLOS_RS13910 PF03819 MazG nucleotide pyrophosphohydrolase domain CLOS_RS13910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLOS_RS13915 PF14667 Polysaccharide biosynthesis C-terminal domain CLOS_RS13915 PF01943 Polysaccharide biosynthesis protein CLOS_RS13920 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CLOS_RS13920 PF15714 Stage V sporulation protein T C-terminal, transcription factor CLOS_RS13930 PF03461 TRCF domain CLOS_RS13930 PF00271 Helicase conserved C-terminal domain CLOS_RS13930 PF02559 CarD-like/TRCF domain CLOS_RS13930 PF17757 UvrB interaction domain CLOS_RS13930 PF00270 DEAD/DEAH box helicase CLOS_RS13940 PF01195 Peptidyl-tRNA hydrolase CLOS_RS13945 PF14572 Phosphoribosyl synthetase-associated domain CLOS_RS13945 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CLOS_RS13950 PF12804 MobA-like NTP transferase domain CLOS_RS13950 PF00132 Bacterial transferase hexapeptide (six repeats) CLOS_RS13950 PF14602 Hexapeptide repeat of succinyl-transferase CLOS_RS13955 PF04026 SpoVG CLOS_RS13960 PF00156 Phosphoribosyl transferase domain CLOS_RS13960 PF09182 Bacterial purine repressor, N-terminal CLOS_RS13965 PF01225 Mur ligase family, catalytic domain CLOS_RS13965 PF02875 Mur ligase family, glutamate ligase domain CLOS_RS13965 PF08245 Mur ligase middle domain CLOS_RS13970 PF03816 Cell envelope-related transcriptional attenuator domain CLOS_RS13975 PF01841 Transglutaminase-like superfamily CLOS_RS13975 PF11992 Domain of unknown function (DUF3488) CLOS_RS13975 PF13559 Domain of unknown function (DUF4129) CLOS_RS13985 PF07726 ATPase family associated with various cellular activities (AAA) CLOS_RS13985 PF17863 AAA lid domain CLOS_RS13990 PF07687 Peptidase dimerisation domain CLOS_RS13990 PF01546 Peptidase family M20/M25/M40 CLOS_RS13995 PF03806 AbgT putative transporter family CLOS_RS14005 PF00398 Ribosomal RNA adenine dimethylase CLOS_RS14010 PF13331 Domain of unknown function (DUF4093) CLOS_RS14010 PF01751 Toprim domain CLOS_RS14015 PF07501 G5 domain CLOS_RS14015 PF03990 G5-linked-Ubiquitin-like domain CLOS_RS14015 PF06725 3D domain CLOS_RS14020 PF00072 Response regulator receiver domain CLOS_RS14025 PF01026 TatD related DNase CLOS_RS14030 PF01588 Putative tRNA binding domain CLOS_RS14030 PF09334 tRNA synthetases class I (M) CLOS_RS14030 PF08264 Anticodon-binding domain of tRNA CLOS_RS14040 PF07670 Nucleoside recognition CLOS_RS14045 PF07670 Nucleoside recognition CLOS_RS14050 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CLOS_RS14050 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CLOS_RS14050 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CLOS_RS14055 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CLOS_RS14055 PF18277 AbrB C-terminal domain CLOS_RS14060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLOS_RS14065 PF05175 Methyltransferase small domain CLOS_RS14085 PF04542 Sigma-70 region 2 CLOS_RS14090 PF03553 Na+/H+ antiporter family CLOS_RS14105 PF00664 ABC transporter transmembrane region CLOS_RS14105 PF00005 ABC transporter CLOS_RS14110 PF00005 ABC transporter CLOS_RS14110 PF00664 ABC transporter transmembrane region CLOS_RS14120 PF01255 Putative undecaprenyl diphosphate synthase CLOS_RS14125 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLOS_RS14125 PF01411 tRNA synthetases class II (A) CLOS_RS14125 PF02272 DHHA1 domain CLOS_RS14130 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS14135 PF00528 Binding-protein-dependent transport system inner membrane component CLOS_RS14140 PF00005 ABC transporter CLOS_RS14145 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLOS_RS14155 PF04055 Radical SAM superfamily CLOS_RS14160 PF01228 Glycine radical CLOS_RS14160 PF02901 Pyruvate formate lyase-like CLOS_RS14165 PF07729 FCD domain CLOS_RS14165 PF00392 Bacterial regulatory proteins, gntR family CLOS_RS14170 PF00890 FAD binding domain CLOS_RS14170 PF04205 FMN-binding domain CLOS_RS14170 PF03358 NADPH-dependent FMN reductase CLOS_RS14185 PF02581 Thiamine monophosphate synthase CLOS_RS14190 PF02110 Hydroxyethylthiazole kinase family CLOS_RS14195 PF08543 Phosphomethylpyrimidine kinase CLOS_RS14205 PF01259 SAICAR synthetase CLOS_RS14210 PF05525 Branched-chain amino acid transport protein CLOS_RS14215 PF00488 MutS domain V CLOS_RS14215 PF01713 Smr domain CLOS_RS14220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS14220 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS14225 PF00072 Response regulator receiver domain CLOS_RS14225 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS14235 PF02653 Branched-chain amino acid transport system / permease component CLOS_RS14240 PF00005 ABC transporter CLOS_RS14250 PF00892 EamA-like transporter family CLOS_RS14260 PF17746 SfsA N-terminal OB domain CLOS_RS14260 PF03749 Sugar fermentation stimulation protein RE domain CLOS_RS14265 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CLOS_RS14270 PF14537 Cytochrome c3 CLOS_RS14270 PF00890 FAD binding domain CLOS_RS14275 PF01467 Cytidylyltransferase-like CLOS_RS14280 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CLOS_RS14280 PF00056 lactate/malate dehydrogenase, NAD binding domain CLOS_RS14290 PF17910 FeoB cytosolic helical domain CLOS_RS14290 PF02421 Ferrous iron transport protein B CLOS_RS14290 PF07670 Nucleoside recognition CLOS_RS14290 PF07664 Ferrous iron transport protein B C terminus CLOS_RS14300 PF00578 AhpC/TSA family CLOS_RS14305 PF02683 Cytochrome C biogenesis protein transmembrane region CLOS_RS14310 PF03323 Bacillus/Clostridium GerA spore germination protein CLOS_RS14345 PF04304 Protein of unknown function (DUF454) CLOS_RS14365 PF03352 Methyladenine glycosylase CLOS_RS14365 PF13302 Acetyltransferase (GNAT) domain CLOS_RS14365 PF13673 Acetyltransferase (GNAT) domain CLOS_RS14365 PF00117 Glutamine amidotransferase class-I CLOS_RS14365 PF00958 GMP synthase C terminal domain CLOS_RS14370 PF00583 Acetyltransferase (GNAT) family CLOS_RS14370 PF13508 Acetyltransferase (GNAT) domain CLOS_RS14375 PF13302 Acetyltransferase (GNAT) domain CLOS_RS14385 PF01037 Lrp/AsnC ligand binding domain CLOS_RS14390 PF00266 Aminotransferase class-V CLOS_RS14395 PF03831 PhnA domain CLOS_RS14395 PF08274 PhnA Zinc-Ribbon CLOS_RS14410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLOS_RS14415 PF12706 Beta-lactamase superfamily domain CLOS_RS14420 PF03553 Na+/H+ antiporter family CLOS_RS14425 PF00750 tRNA synthetases class I (R) CLOS_RS14425 PF05746 DALR anticodon binding domain CLOS_RS14425 PF03485 Arginyl tRNA synthetase N terminal domain CLOS_RS14430 PF13419 Haloacid dehalogenase-like hydrolase CLOS_RS14435 PF01235 Sodium:alanine symporter family CLOS_RS14440 PF00557 Metallopeptidase family M24 CLOS_RS14445 PF12833 Helix-turn-helix domain CLOS_RS14450 PF06445 GyrI-like small molecule binding domain CLOS_RS14450 PF12833 Helix-turn-helix domain CLOS_RS14460 PF00892 EamA-like transporter family CLOS_RS14465 PF12833 Helix-turn-helix domain CLOS_RS14470 PF00881 Nitroreductase family CLOS_RS14480 PF00005 ABC transporter CLOS_RS14520 PF02645 Uncharacterised protein, DegV family COG1307 CLOS_RS14530 PF00196 Bacterial regulatory proteins, luxR family CLOS_RS14530 PF00072 Response regulator receiver domain CLOS_RS14535 PF00149 Calcineurin-like phosphoesterase CLOS_RS14540 PF00805 Pentapeptide repeats (8 copies) CLOS_RS14555 PF13649 Methyltransferase domain CLOS_RS14560 PF04542 Sigma-70 region 2 CLOS_RS14560 PF08281 Sigma-70, region 4 CLOS_RS14585 PF01979 Amidohydrolase family CLOS_RS14595 PF13411 MerR HTH family regulatory protein CLOS_RS14605 PF02590 Predicted SPOUT methyltransferase CLOS_RS14610 PF13180 PDZ domain CLOS_RS14615 PF00753 Metallo-beta-lactamase superfamily CLOS_RS14620 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLOS_RS14640 PF00672 HAMP domain CLOS_RS14640 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS14640 PF13426 PAS domain CLOS_RS14640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS14645 PF00486 Transcriptional regulatory protein, C terminal CLOS_RS14645 PF00072 Response regulator receiver domain CLOS_RS14655 PF00082 Subtilase family CLOS_RS14660 PF00563 EAL domain CLOS_RS14660 PF08668 HDOD domain CLOS_RS14665 PF00990 Diguanylate cyclase, GGDEF domain CLOS_RS14670 PF02743 Cache domain CLOS_RS14670 PF00672 HAMP domain CLOS_RS14670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLOS_RS14675 PF04397 LytTr DNA-binding domain CLOS_RS14675 PF00072 Response regulator receiver domain CLOS_RS14680 PF06580 Histidine kinase CLOS_RS14680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS14685 PF01476 LysM domain CLOS_RS14685 PF01551 Peptidase family M23 CLOS_RS14710 PF00772 DnaB-like helicase N terminal domain CLOS_RS14710 PF03796 DnaB-like helicase C terminal domain CLOS_RS14715 PF03948 Ribosomal protein L9, C-terminal domain CLOS_RS14715 PF01281 Ribosomal protein L9, N-terminal domain CLOS_RS14720 PF02272 DHHA1 domain CLOS_RS14720 PF01368 DHH family CLOS_RS14745 PF02562 PhoH-like protein CLOS_RS14745 PF13638 PIN domain CLOS_RS14750 PF01814 Hemerythrin HHE cation binding domain CLOS_RS14755 PF02915 Rubrerythrin CLOS_RS14765 PF01556 DnaJ C terminal domain CLOS_RS14765 PF00684 DnaJ central domain CLOS_RS14765 PF00226 DnaJ domain CLOS_RS14770 PF12833 Helix-turn-helix domain CLOS_RS14770 PF10114 Sensory domain found in PocR CLOS_RS14775 PF00756 Putative esterase CLOS_RS14780 PF00005 ABC transporter CLOS_RS14785 PF01032 FecCD transport family CLOS_RS14790 PF01032 FecCD transport family CLOS_RS14795 PF01497 Periplasmic binding protein CLOS_RS14810 PF01522 Polysaccharide deacetylase CLOS_RS14825 PF01451 Low molecular weight phosphotyrosine protein phosphatase CLOS_RS14830 PF01022 Bacterial regulatory protein, arsR family CLOS_RS14845 PF00291 Pyridoxal-phosphate dependent enzyme CLOS_RS14855 PF00072 Response regulator receiver domain CLOS_RS14855 PF00158 Sigma-54 interaction domain CLOS_RS14855 PF02954 Bacterial regulatory protein, Fis family CLOS_RS14860 PF00989 PAS fold CLOS_RS14860 PF08447 PAS fold CLOS_RS14860 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS14860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS14865 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CLOS_RS14865 PF00326 Prolyl oligopeptidase family CLOS_RS14915 PF01380 SIS domain CLOS_RS14935 PF00293 NUDIX domain CLOS_RS14955 PF00583 Acetyltransferase (GNAT) family CLOS_RS14970 PF12833 Helix-turn-helix domain CLOS_RS14970 PF06445 GyrI-like small molecule binding domain CLOS_RS14995 PF00398 Ribosomal RNA adenine dimethylase CLOS_RS15010 PF13662 Toprim domain CLOS_RS15010 PF02132 RecR protein CLOS_RS15015 PF02575 YbaB/EbfC DNA-binding family CLOS_RS15020 PF12169 DNA polymerase III subunits gamma and tau domain III CLOS_RS15030 PF06866 Protein of unknown function (DUF1256) CLOS_RS15035 PF02557 D-alanyl-D-alanine carboxypeptidase CLOS_RS15040 PF01820 D-ala D-ala ligase N-terminus CLOS_RS15040 PF07478 D-ala D-ala ligase C-terminus CLOS_RS15045 PF04294 VanW like protein CLOS_RS15060 PF00781 Diacylglycerol kinase catalytic domain CLOS_RS15070 PF00266 Aminotransferase class-V CLOS_RS15075 PF02195 ParB-like nuclease domain CLOS_RS15075 PF17762 HTH domain found in ParB protein CLOS_RS15080 PF13614 AAA domain CLOS_RS15085 PF02195 ParB-like nuclease domain CLOS_RS15085 PF17762 HTH domain found in ParB protein CLOS_RS15090 PF02527 rRNA small subunit methyltransferase G CLOS_RS15095 PF13932 GidA associated domain CLOS_RS15095 PF01134 Glucose inhibited division protein A CLOS_RS15100 PF10396 GTP-binding protein TrmE N-terminus CLOS_RS15100 PF12631 MnmE helical domain CLOS_RS15100 PF01926 50S ribosome-binding GTPase CLOS_RS15105 PF14804 Jag N-terminus CLOS_RS15105 PF01424 R3H domain CLOS_RS15110 PF02096 60Kd inner membrane protein CLOS_RS15115 PF00825 Ribonuclease P CLOS_RS15120 PF00468 Ribosomal protein L34 CLOS_RS15155 PF04205 FMN-binding domain CLOS_RS15155 PF00890 FAD binding domain CLOS_RS15160 PF00188 Cysteine-rich secretory protein family CLOS_RS15175 PF00395 S-layer homology domain CLOS_RS15175 PF01520 N-acetylmuramoyl-L-alanine amidase CLOS_RS15190 PF00512 His Kinase A (phospho-acceptor) domain CLOS_RS15190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLOS_RS15190 PF00672 HAMP domain CLOS_RS15195 PF00990 Diguanylate cyclase, GGDEF domain CLOS_RS15195 PF08448 PAS fold CLOS_RS15215 PF08534 Redoxin CLOS_RS15220 PF17158 Membrane-associated sensor, integral membrane domain CLOS_RS15220 PF00990 Diguanylate cyclase, GGDEF domain CLOS_RS15230 PF07486 Cell Wall Hydrolase CLOS_RS15235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLOS_RS15245 PF02620 Large ribosomal RNA subunit accumulation protein YceD CLOS_RS15260 PF02163 Peptidase family M50 CLOS_RS15275 PF01381 Helix-turn-helix CLOS_RS15300 PF00990 Diguanylate cyclase, GGDEF domain CLOS_RS15300 PF03707 Bacterial signalling protein N terminal repeat CLOS_RS15300 PF00563 EAL domain CLOS_RS15305 PF05164 Cell division protein ZapA CLOS_RS15320 PF00072 Response regulator receiver domain CLOS_RS15330 PF01966 HD domain CLOS_RS15350 PF02465 Flagellar hook-associated protein 2 N-terminus CLOS_RS15350 PF07195 Flagellar hook-associated protein 2 C-terminus CLOS_RS15350 PF07196 Flagellin hook IN motif CLOS_RS15360 PF03979 Sigma-70 factor, region 1.1 CLOS_RS15360 PF00140 Sigma-70 factor, region 1.2 CLOS_RS15360 PF04542 Sigma-70 region 2 CLOS_RS15360 PF04539 Sigma-70 region 3 CLOS_RS15360 PF04545 Sigma-70, region 4 CLOS_RS15380 PF05698 Bacterial trigger factor protein (TF) C-terminus CLOS_RS15385 PF07739 TipAS antibiotic-recognition domain CLOS_RS15385 PF13411 MerR HTH family regulatory protein CLOS_RS15390 PF00583 Acetyltransferase (GNAT) family CLOS_RS15395 PF00364 Biotin-requiring enzyme CLOS_RS15395 PF00561 alpha/beta hydrolase fold