locus-tag class description CDL62_RS00005 PF00308 Bacterial dnaA protein CDL62_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CDL62_RS00005 PF11638 DnaA N-terminal domain CDL62_RS00015 PF01520 N-acetylmuramoyl-L-alanine amidase CDL62_RS00025 PF01042 Endoribonuclease L-PSP CDL62_RS00030 PF01281 Ribosomal protein L9, N-terminal domain CDL62_RS00030 PF03948 Ribosomal protein L9, C-terminal domain CDL62_RS00035 PF01084 Ribosomal protein S18 CDL62_RS00040 PF01250 Ribosomal protein S6 CDL62_RS00045 PF01180 Dihydroorotate dehydrogenase CDL62_RS00050 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDL62_RS00050 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDL62_RS00055 PF00175 Oxidoreductase NAD-binding domain CDL62_RS00055 PF00970 Oxidoreductase FAD-binding domain CDL62_RS00055 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDL62_RS00065 PF00480 ROK family CDL62_RS00070 PF00480 ROK family CDL62_RS00075 PF00703 Glycosyl hydrolases family 2 CDL62_RS00075 PF16990 Carbohydrate binding module (family 35) CDL62_RS00075 PF02837 Glycosyl hydrolases family 2, sugar binding domain CDL62_RS00075 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain CDL62_RS00080 PF00356 Bacterial regulatory proteins, lacI family CDL62_RS00085 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CDL62_RS00085 PF04616 Glycosyl hydrolases family 43 CDL62_RS00090 PF07691 PA14 domain CDL62_RS00090 PF01915 Glycosyl hydrolase family 3 C-terminal domain CDL62_RS00090 PF00933 Glycosyl hydrolase family 3 N terminal domain CDL62_RS00090 PF14310 Fibronectin type III-like domain CDL62_RS00095 PF07477 Glycosyl hydrolase family 67 C-terminus CDL62_RS00095 PF07488 Glycosyl hydrolase family 67 middle domain CDL62_RS00095 PF03648 Glycosyl hydrolase family 67 N-terminus CDL62_RS00100 PF01915 Glycosyl hydrolase family 3 C-terminal domain CDL62_RS00100 PF07691 PA14 domain CDL62_RS00100 PF14310 Fibronectin type III-like domain CDL62_RS00100 PF00933 Glycosyl hydrolase family 3 N terminal domain CDL62_RS00105 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS00105 PF12833 Helix-turn-helix domain CDL62_RS00105 PF07494 Two component regulator propeller CDL62_RS00105 PF00072 Response regulator receiver domain CDL62_RS00105 PF07495 Y_Y_Y domain CDL62_RS00115 PF00924 Mechanosensitive ion channel CDL62_RS00135 PF01039 Carboxyl transferase domain CDL62_RS00140 PF00378 Enoyl-CoA hydratase/isomerase CDL62_RS00145 PF02785 Biotin carboxylase C-terminal domain CDL62_RS00145 PF00289 Biotin carboxylase, N-terminal domain CDL62_RS00145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDL62_RS00155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDL62_RS00155 PF02770 Acyl-CoA dehydrogenase, middle domain CDL62_RS00155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDL62_RS00160 PF03883 Peroxide stress protein YaaA CDL62_RS00170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CDL62_RS00170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CDL62_RS00185 PF01609 Transposase DDE domain CDL62_RS00195 PF04616 Glycosyl hydrolases family 43 CDL62_RS00225 PF01734 Patatin-like phospholipase CDL62_RS00250 PF00072 Response regulator receiver domain CDL62_RS00250 PF04397 LytTr DNA-binding domain CDL62_RS00255 PF01208 Uroporphyrinogen decarboxylase (URO-D) CDL62_RS00260 PF00202 Aminotransferase class-III CDL62_RS00265 PF00490 Delta-aminolevulinic acid dehydratase CDL62_RS00275 PF03900 Porphobilinogen deaminase, C-terminal domain CDL62_RS00275 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CDL62_RS00280 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CDL62_RS00280 PF01488 Shikimate / quinate 5-dehydrogenase CDL62_RS00280 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CDL62_RS00300 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain CDL62_RS00300 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDL62_RS00305 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS00305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS00305 PF00072 Response regulator receiver domain CDL62_RS00305 PF01627 Hpt domain CDL62_RS00305 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS00305 PF00672 HAMP domain CDL62_RS00310 PF12833 Helix-turn-helix domain CDL62_RS00335 PF01593 Flavin containing amine oxidoreductase CDL62_RS00340 PF06969 HemN C-terminal domain CDL62_RS00340 PF04055 Radical SAM superfamily CDL62_RS00365 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CDL62_RS00370 PF01070 FMN-dependent dehydrogenase CDL62_RS00375 PF00005 ABC transporter CDL62_RS00375 PF00664 ABC transporter transmembrane region CDL62_RS00380 PF00664 ABC transporter transmembrane region CDL62_RS00380 PF00005 ABC transporter CDL62_RS00385 PF04107 Glutamate-cysteine ligase family 2(GCS2) CDL62_RS00390 PF04262 Glutamate-cysteine ligase CDL62_RS00390 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CDL62_RS00390 PF18419 ATP-grasp-like domain CDL62_RS00395 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CDL62_RS00400 PF00083 Sugar (and other) transporter CDL62_RS00405 PF01261 Xylose isomerase-like TIM barrel CDL62_RS00415 PF07702 UTRA domain CDL62_RS00415 PF00392 Bacterial regulatory proteins, gntR family CDL62_RS00420 PF00270 DEAD/DEAH box helicase CDL62_RS00420 PF00271 Helicase conserved C-terminal domain CDL62_RS00425 PF03458 UPF0126 domain CDL62_RS00445 PF04231 Endonuclease I CDL62_RS00450 PF03435 Saccharopine dehydrogenase NADP binding domain CDL62_RS00450 PF16653 Saccharopine dehydrogenase C-terminal domain CDL62_RS00460 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CDL62_RS00465 PF09382 RQC domain CDL62_RS00465 PF00271 Helicase conserved C-terminal domain CDL62_RS00465 PF00570 HRDC domain CDL62_RS00465 PF16124 RecQ zinc-binding CDL62_RS00465 PF00270 DEAD/DEAH box helicase CDL62_RS00470 PF04616 Glycosyl hydrolases family 43 CDL62_RS00475 PF00364 Biotin-requiring enzyme CDL62_RS00475 PF00682 HMGL-like CDL62_RS00475 PF02436 Conserved carboxylase domain CDL62_RS00480 PF00364 Biotin-requiring enzyme CDL62_RS00480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDL62_RS00480 PF02785 Biotin carboxylase C-terminal domain CDL62_RS00480 PF00289 Biotin carboxylase, N-terminal domain CDL62_RS00495 PF04616 Glycosyl hydrolases family 43 CDL62_RS00495 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CDL62_RS00530 PF01551 Peptidase family M23 CDL62_RS00540 PF05970 PIF1-like helicase CDL62_RS00545 PF01467 Cytidylyltransferase-like CDL62_RS00550 PF00625 Guanylate kinase CDL62_RS00555 PF08340 Domain of unknown function (DUF1732) CDL62_RS00555 PF03755 YicC-like family, N-terminal region CDL62_RS00565 PF01554 MatE CDL62_RS00570 PF13411 MerR HTH family regulatory protein CDL62_RS00570 PF02607 B12 binding domain CDL62_RS00570 PF02310 B12 binding domain CDL62_RS00575 PF00593 TonB dependent receptor CDL62_RS00575 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS00580 PF14322 Starch-binding associating with outer membrane CDL62_RS00580 PF07980 SusD family CDL62_RS00600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDL62_RS00600 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDL62_RS00600 PF02811 PHP domain CDL62_RS00600 PF14579 Helix-hairpin-helix motif CDL62_RS00610 PF00817 impB/mucB/samB family CDL62_RS00610 PF11799 impB/mucB/samB family C-terminal domain CDL62_RS00610 PF11798 IMS family HHH motif CDL62_RS00620 PF01613 Flavin reductase like domain CDL62_RS00625 PF00881 Nitroreductase family CDL62_RS00635 PF01053 Cys/Met metabolism PLP-dependent enzyme CDL62_RS00640 PF03006 Haemolysin-III related CDL62_RS00655 PF13229 Right handed beta helix region CDL62_RS00660 PF00072 Response regulator receiver domain CDL62_RS00660 PF00196 Bacterial regulatory proteins, luxR family CDL62_RS00670 PF00703 Glycosyl hydrolases family 2 CDL62_RS00670 PF16355 Domain of unknown function (DUF4982) CDL62_RS00670 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CDL62_RS00670 PF02837 Glycosyl hydrolases family 2, sugar binding domain CDL62_RS00670 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CDL62_RS00675 PF01145 SPFH domain / Band 7 family CDL62_RS00680 PF01145 SPFH domain / Band 7 family CDL62_RS00685 PF00982 Glycosyltransferase family 20 CDL62_RS00690 PF00723 Glycosyl hydrolases family 15 CDL62_RS00700 PF00207 Alpha-2-macroglobulin family CDL62_RS00700 PF01835 MG2 domain CDL62_RS00700 PF07703 Alpha-2-macroglobulin bait region domain CDL62_RS00705 PF13411 MerR HTH family regulatory protein CDL62_RS00705 PF00145 C-5 cytosine-specific DNA methylase CDL62_RS00710 PF09553 Eco47II restriction endonuclease CDL62_RS00725 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS00725 PF00593 TonB dependent receptor CDL62_RS00735 PF08753 NikR C terminal nickel binding domain CDL62_RS00735 PF01402 Ribbon-helix-helix protein, copG family CDL62_RS00745 PF01032 FecCD transport family CDL62_RS00750 PF00005 ABC transporter CDL62_RS00760 PF01980 tRNA-methyltransferase O CDL62_RS00785 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CDL62_RS00790 PF02152 Dihydroneopterin aldolase CDL62_RS00800 PF13185 GAF domain CDL62_RS00805 PF04542 Sigma-70 region 2 CDL62_RS00805 PF08281 Sigma-70, region 4 CDL62_RS00810 PF01053 Cys/Met metabolism PLP-dependent enzyme CDL62_RS00815 PF03976 Polyphosphate kinase 2 (PPK2) CDL62_RS00830 PF01235 Sodium:alanine symporter family CDL62_RS00840 PF13520 Amino acid permease CDL62_RS00845 PF00989 PAS fold CDL62_RS00845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS00845 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS00850 PF16921 Tex protein YqgF-like domain CDL62_RS00850 PF09371 Tex-like protein N-terminal domain CDL62_RS00850 PF00575 S1 RNA binding domain CDL62_RS00850 PF17674 HHH domain CDL62_RS00865 PF00270 DEAD/DEAH box helicase CDL62_RS00865 PF00271 Helicase conserved C-terminal domain CDL62_RS00870 PF10672 S-adenosylmethionine-dependent methyltransferase CDL62_RS00870 PF17785 PUA-like domain CDL62_RS00885 PF00270 DEAD/DEAH box helicase CDL62_RS00885 PF00570 HRDC domain CDL62_RS00885 PF00271 Helicase conserved C-terminal domain CDL62_RS00885 PF16124 RecQ zinc-binding CDL62_RS00885 PF09382 RQC domain CDL62_RS00890 PF00436 Single-strand binding protein family CDL62_RS00895 PF00248 Aldo/keto reductase family CDL62_RS00905 PF01047 MarR family CDL62_RS00910 PF00255 Glutathione peroxidase CDL62_RS00920 PF02254 TrkA-N domain CDL62_RS00920 PF00999 Sodium/hydrogen exchanger family CDL62_RS00925 PF17755 UvrA DNA-binding domain CDL62_RS00925 PF17760 UvrA interaction domain CDL62_RS00940 PF00849 RNA pseudouridylate synthase CDL62_RS00940 PF01479 S4 domain CDL62_RS00960 PF07745 Glycosyl hydrolase family 53 CDL62_RS00975 PF07980 SusD family CDL62_RS00980 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS00980 PF00593 TonB dependent receptor CDL62_RS00985 PF16355 Domain of unknown function (DUF4982) CDL62_RS00985 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CDL62_RS00985 PF00703 Glycosyl hydrolases family 2 CDL62_RS00985 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CDL62_RS00985 PF02837 Glycosyl hydrolases family 2, sugar binding domain CDL62_RS00990 PF07745 Glycosyl hydrolase family 53 CDL62_RS00995 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS00995 PF07494 Two component regulator propeller CDL62_RS00995 PF07495 Y_Y_Y domain CDL62_RS00995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS00995 PF12833 Helix-turn-helix domain CDL62_RS00995 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS00995 PF00072 Response regulator receiver domain CDL62_RS00995 PF12833 Helix-turn-helix domain CDL62_RS00995 PF00072 Response regulator receiver domain CDL62_RS00995 PF07494 Two component regulator propeller CDL62_RS00995 PF07495 Y_Y_Y domain CDL62_RS00995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS01000 PF02508 Rnf-Nqr subunit, membrane protein CDL62_RS01005 PF02508 Rnf-Nqr subunit, membrane protein CDL62_RS01010 PF04205 FMN-binding domain CDL62_RS01015 PF03116 NQR2, RnfD, RnfE family CDL62_RS01020 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDL62_RS01020 PF10531 SLBB domain CDL62_RS01020 PF13237 4Fe-4S dicluster domain CDL62_RS01020 PF13375 RnfC Barrel sandwich hybrid domain CDL62_RS01025 PF04060 Putative Fe-S cluster CDL62_RS01035 PF00270 DEAD/DEAH box helicase CDL62_RS01035 PF00271 Helicase conserved C-terminal domain CDL62_RS01035 PF17191 RecG wedge domain CDL62_RS01045 PF12704 MacB-like periplasmic core domain CDL62_RS01045 PF00005 ABC transporter CDL62_RS01045 PF02687 FtsX-like permease family CDL62_RS01050 PF01923 Cobalamin adenosyltransferase CDL62_RS01065 PF09312 SurA N-terminal domain CDL62_RS01065 PF00639 PPIC-type PPIASE domain CDL62_RS01075 PF05698 Bacterial trigger factor protein (TF) C-terminus CDL62_RS01080 PF00478 IMP dehydrogenase / GMP reductase domain CDL62_RS01080 PF00571 CBS domain CDL62_RS01115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDL62_RS01130 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDL62_RS01135 PF01554 MatE CDL62_RS01140 PF01266 FAD dependent oxidoreductase CDL62_RS01140 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CDL62_RS01145 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CDL62_RS01145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDL62_RS01150 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CDL62_RS01150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDL62_RS01155 PF07929 Plasmid pRiA4b ORF-3-like protein CDL62_RS01170 PF01545 Cation efflux family CDL62_RS01175 PF17185 NlpE C-terminal OB domain CDL62_RS01175 PF04170 NlpE N-terminal domain CDL62_RS01195 PF04962 KduI/IolB family CDL62_RS01205 PF00356 Bacterial regulatory proteins, lacI family CDL62_RS01210 PF02614 Glucuronate isomerase CDL62_RS01220 PF01081 KDPG and KHG aldolase CDL62_RS01225 PF00106 short chain dehydrogenase CDL62_RS01230 PF00294 pfkB family carbohydrate kinase CDL62_RS01240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CDL62_RS01240 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CDL62_RS01245 PF03480 Bacterial extracellular solute-binding protein, family 7 CDL62_RS01255 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CDL62_RS01260 PF13407 Periplasmic binding protein domain CDL62_RS01260 PF00356 Bacterial regulatory proteins, lacI family CDL62_RS01265 PF16257 tagaturonate epimerase CDL62_RS01295 PF00534 Glycosyl transferases group 1 CDL62_RS01295 PF13439 Glycosyltransferase Family 4 CDL62_RS01310 PF04055 Radical SAM superfamily CDL62_RS01310 PF13282 Domain of unknown function (DUF4070) CDL62_RS01310 PF02310 B12 binding domain CDL62_RS01320 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS01320 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS01320 PF00072 Response regulator receiver domain CDL62_RS01320 PF01627 Hpt domain CDL62_RS01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS01320 PF00672 HAMP domain CDL62_RS01325 PF02405 Permease MlaE CDL62_RS01330 PF00005 ABC transporter CDL62_RS01350 PF00691 OmpA family CDL62_RS01350 PF05736 OprF membrane domain CDL62_RS01355 PF01739 CheR methyltransferase, SAM binding domain CDL62_RS01355 PF03705 CheR methyltransferase, all-alpha domain CDL62_RS01355 PF01339 CheB methylesterase CDL62_RS01355 PF08448 PAS fold CDL62_RS01365 PF11999 Protein of unknown function (DUF3494) CDL62_RS01385 PF01546 Peptidase family M20/M25/M40 CDL62_RS01385 PF07687 Peptidase dimerisation domain CDL62_RS01395 PF01734 Patatin-like phospholipase CDL62_RS01445 PF00578 AhpC/TSA family CDL62_RS01445 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDL62_RS01450 PF02001 Protein of unknown function DUF134 CDL62_RS01460 PF12706 Beta-lactamase superfamily domain CDL62_RS01490 PF14535 AMP-binding enzyme C-terminal domain CDL62_RS01490 PF00501 AMP-binding enzyme CDL62_RS01500 PF13607 Succinyl-CoA ligase like flavodoxin domain CDL62_RS01500 PF13380 CoA binding domain CDL62_RS01505 PF06968 Biotin and Thiamin Synthesis associated domain CDL62_RS01505 PF04055 Radical SAM superfamily CDL62_RS01510 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CDL62_RS01510 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CDL62_RS01515 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CDL62_RS01525 PF00672 HAMP domain CDL62_RS01525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS01525 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS01525 PF01627 Hpt domain CDL62_RS01525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS01525 PF00072 Response regulator receiver domain CDL62_RS01535 PF02503 Polyphosphate kinase middle domain CDL62_RS01535 PF17941 Polyphosphate kinase C-terminal domain 1 CDL62_RS01535 PF13090 Polyphosphate kinase C-terminal domain 2 CDL62_RS01535 PF13089 Polyphosphate kinase N-terminal domain CDL62_RS01550 PF02767 DNA polymerase III beta subunit, central domain CDL62_RS01550 PF02768 DNA polymerase III beta subunit, C-terminal domain CDL62_RS01550 PF00712 DNA polymerase III beta subunit, N-terminal domain CDL62_RS01560 PF02684 Lipid-A-disaccharide synthetase CDL62_RS01570 PF01975 Survival protein SurE CDL62_RS01575 PF03147 Ferredoxin-fold anticodon binding domain CDL62_RS01575 PF01588 Putative tRNA binding domain CDL62_RS01575 PF03484 tRNA synthetase B5 domain CDL62_RS01575 PF03483 B3/4 domain CDL62_RS01575 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CDL62_RS01700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDL62_RS01700 PF00529 HlyD membrane-fusion protein of T1SS CDL62_RS01710 PF00873 AcrB/AcrD/AcrF family CDL62_RS01720 PF00873 AcrB/AcrD/AcrF family CDL62_RS01730 PF10502 Signal peptidase, peptidase S26 CDL62_RS01735 PF01609 Transposase DDE domain CDL62_RS01785 PF01431 Peptidase family M13 CDL62_RS01785 PF05649 Peptidase family M13 CDL62_RS01825 PF17954 Quercetinase C-terminal cupin domain CDL62_RS01825 PF02678 Pirin CDL62_RS01830 PF00762 Ferrochelatase CDL62_RS01835 PF01218 Coproporphyrinogen III oxidase CDL62_RS01845 PF00404 Dockerin type I domain CDL62_RS01845 PF00150 Cellulase (glycosyl hydrolase family 5) CDL62_RS01845 PF03425 Carbohydrate binding domain (family 11) CDL62_RS01860 PF00271 Helicase conserved C-terminal domain CDL62_RS01860 PF00270 DEAD/DEAH box helicase CDL62_RS01870 PF16355 Domain of unknown function (DUF4982) CDL62_RS01870 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CDL62_RS01870 PF02837 Glycosyl hydrolases family 2, sugar binding domain CDL62_RS01870 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CDL62_RS01870 PF00703 Glycosyl hydrolases family 2 CDL62_RS01885 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CDL62_RS01885 PF17944 Arginine decarboxylase C-terminal helical extension CDL62_RS01885 PF17810 Arginine decarboxylase helical bundle domain CDL62_RS01900 PF00742 Homoserine dehydrogenase CDL62_RS01900 PF13840 ACT domain CDL62_RS01900 PF01842 ACT domain CDL62_RS01900 PF00696 Amino acid kinase family CDL62_RS01900 PF03447 Homoserine dehydrogenase, NAD binding domain CDL62_RS01930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDL62_RS01930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDL62_RS01935 PF02424 ApbE family CDL62_RS01950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDL62_RS01950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDL62_RS01955 PF00072 Response regulator receiver domain CDL62_RS01955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS01955 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS01955 PF12833 Helix-turn-helix domain CDL62_RS01955 PF07494 Two component regulator propeller CDL62_RS01955 PF00072 Response regulator receiver domain CDL62_RS01955 PF07495 Y_Y_Y domain CDL62_RS01955 PF07495 Y_Y_Y domain CDL62_RS01955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS01955 PF07494 Two component regulator propeller CDL62_RS01955 PF12833 Helix-turn-helix domain CDL62_RS01955 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS01965 PF02872 5'-nucleotidase, C-terminal domain CDL62_RS01965 PF00149 Calcineurin-like phosphoesterase CDL62_RS01975 PF01037 Lrp/AsnC ligand binding domain CDL62_RS01975 PF13404 AsnC-type helix-turn-helix domain CDL62_RS02025 PF00425 chorismate binding enzyme CDL62_RS02025 PF04715 Anthranilate synthase component I, N terminal region CDL62_RS02030 PF01171 PP-loop family CDL62_RS02035 PF02837 Glycosyl hydrolases family 2, sugar binding domain CDL62_RS02035 PF00703 Glycosyl hydrolases family 2 CDL62_RS02035 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CDL62_RS02035 PF16355 Domain of unknown function (DUF4982) CDL62_RS02035 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CDL62_RS02040 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family CDL62_RS02045 PF00295 Glycosyl hydrolases family 28 CDL62_RS02050 PF13472 GDSL-like Lipase/Acylhydrolase family CDL62_RS02060 PF05336 L-rhamnose mutarotase CDL62_RS02085 PF18370 Rhamnogalacturonan I lyases beta-sheet domain CDL62_RS02090 PF18370 Rhamnogalacturonan I lyases beta-sheet domain CDL62_RS02105 PF00593 TonB dependent receptor CDL62_RS02105 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS02120 PF07980 SusD family CDL62_RS02120 PF14322 Starch-binding associating with outer membrane CDL62_RS02125 PF00593 TonB dependent receptor CDL62_RS02125 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS02135 PF00251 Glycosyl hydrolases family 32 N-terminal domain CDL62_RS02135 PF08244 Glycosyl hydrolases family 32 C terminal CDL62_RS02150 PF06134 L-rhamnose isomerase (RhaA) CDL62_RS02155 PF06379 L-rhamnose-proton symport protein (RhaT) CDL62_RS02160 PF00107 Zinc-binding dehydrogenase CDL62_RS02160 PF08240 Alcohol dehydrogenase GroES-like domain CDL62_RS02165 PF00106 short chain dehydrogenase CDL62_RS02175 PF02780 Transketolase, C-terminal domain CDL62_RS02175 PF02779 Transketolase, pyrimidine binding domain CDL62_RS02180 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDL62_RS02180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDL62_RS02185 PF02817 e3 binding domain CDL62_RS02185 PF00364 Biotin-requiring enzyme CDL62_RS02185 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CDL62_RS02190 PF04616 Glycosyl hydrolases family 43 CDL62_RS02200 PF13476 AAA domain CDL62_RS02215 PF12320 Type 5 capsule protein repressor C-terminal domain CDL62_RS02215 PF00149 Calcineurin-like phosphoesterase CDL62_RS02240 PF04324 BFD-like [2Fe-2S] binding domain CDL62_RS02240 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDL62_RS02240 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDL62_RS02240 PF18267 Rubredoxin NAD+ reductase C-terminal domain CDL62_RS02255 PF07980 SusD family CDL62_RS02255 PF14322 Starch-binding associating with outer membrane CDL62_RS02260 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS02260 PF00593 TonB dependent receptor CDL62_RS02270 PF00072 Response regulator receiver domain CDL62_RS02270 PF07495 Y_Y_Y domain CDL62_RS02270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS02270 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS02270 PF12833 Helix-turn-helix domain CDL62_RS02270 PF07494 Two component regulator propeller CDL62_RS02275 PF07470 Glycosyl Hydrolase Family 88 CDL62_RS02280 PF01095 Pectinesterase CDL62_RS02285 PF04616 Glycosyl hydrolases family 43 CDL62_RS02285 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CDL62_RS02290 PF00295 Glycosyl hydrolases family 28 CDL62_RS02295 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS02295 PF00593 TonB dependent receptor CDL62_RS02300 PF00312 Ribosomal protein S15 CDL62_RS02305 PF00575 S1 RNA binding domain CDL62_RS02305 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CDL62_RS02305 PF00013 KH domain CDL62_RS02305 PF03725 3' exoribonuclease family, domain 2 CDL62_RS02305 PF01138 3' exoribonuclease family, domain 1 CDL62_RS02315 PF00326 Prolyl oligopeptidase family CDL62_RS02315 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CDL62_RS02325 PF02903 Alpha amylase, N-terminal ig-like domain CDL62_RS02325 PF00128 Alpha amylase, catalytic domain CDL62_RS02345 PF01261 Xylose isomerase-like TIM barrel CDL62_RS02350 PF00549 CoA-ligase CDL62_RS02350 PF08442 ATP-grasp domain CDL62_RS02355 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDL62_RS02355 PF00588 SpoU rRNA Methylase family CDL62_RS02375 PF01594 AI-2E family transporter CDL62_RS02380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDL62_RS02380 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDL62_RS02385 PF00691 OmpA family CDL62_RS02385 PF01389 OmpA-like transmembrane domain CDL62_RS02390 PF00586 AIR synthase related protein, N-terminal domain CDL62_RS02390 PF02769 AIR synthase related protein, C-terminal domain CDL62_RS02395 PF00472 RF-1 domain CDL62_RS02395 PF03462 PCRF domain CDL62_RS02400 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CDL62_RS02405 PF00085 Thioredoxin CDL62_RS02410 PF01432 Peptidase family M3 CDL62_RS02415 PF00258 Flavodoxin CDL62_RS02415 PF00175 Oxidoreductase NAD-binding domain CDL62_RS02415 PF00667 FAD binding domain CDL62_RS02470 PF00578 AhpC/TSA family CDL62_RS02475 PF07687 Peptidase dimerisation domain CDL62_RS02475 PF01546 Peptidase family M20/M25/M40 CDL62_RS02480 PF00037 4Fe-4S binding domain CDL62_RS02500 PF00795 Carbon-nitrogen hydrolase CDL62_RS02500 PF02540 NAD synthase CDL62_RS02510 PF01168 Alanine racemase, N-terminal domain CDL62_RS02510 PF00842 Alanine racemase, C-terminal domain CDL62_RS02515 PF00265 Thymidine kinase CDL62_RS02525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDL62_RS02535 PF13419 Haloacid dehalogenase-like hydrolase CDL62_RS02540 PF03796 DnaB-like helicase C terminal domain CDL62_RS02540 PF00772 DnaB-like helicase N terminal domain CDL62_RS02545 PF00288 GHMP kinases N terminal domain CDL62_RS02545 PF08544 GHMP kinases C terminal CDL62_RS02550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS02550 PF00072 Response regulator receiver domain CDL62_RS02550 PF07495 Y_Y_Y domain CDL62_RS02550 PF12833 Helix-turn-helix domain CDL62_RS02550 PF07494 Two component regulator propeller CDL62_RS02550 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS02555 PF01336 OB-fold nucleic acid binding domain CDL62_RS02555 PF00152 tRNA synthetases class II (D, K and N) CDL62_RS02565 PF00326 Prolyl oligopeptidase family CDL62_RS02565 PF07676 WD40-like Beta Propeller Repeat CDL62_RS02565 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CDL62_RS02570 PF00289 Biotin carboxylase, N-terminal domain CDL62_RS02570 PF00364 Biotin-requiring enzyme CDL62_RS02570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDL62_RS02570 PF02785 Biotin carboxylase C-terminal domain CDL62_RS02575 PF01039 Carboxyl transferase domain CDL62_RS02585 PF01702 Queuine tRNA-ribosyltransferase CDL62_RS02590 PF00535 Glycosyl transferase family 2 CDL62_RS02595 PF08281 Sigma-70, region 4 CDL62_RS02595 PF04542 Sigma-70 region 2 CDL62_RS02600 PF02527 rRNA small subunit methyltransferase G CDL62_RS02615 PF00468 Ribosomal protein L34 CDL62_RS02620 PF00069 Protein kinase domain CDL62_RS02620 PF03793 PASTA domain CDL62_RS02625 PF01479 S4 domain CDL62_RS02625 PF00849 RNA pseudouridylate synthase CDL62_RS02630 PF01820 D-ala D-ala ligase N-terminus CDL62_RS02630 PF07478 D-ala D-ala ligase C-terminus CDL62_RS02640 PF08534 Redoxin CDL62_RS02660 PF00793 DAHP synthetase I family CDL62_RS02660 PF18152 DAHP synthase ferredoxin-like domain CDL62_RS02665 PF00155 Aminotransferase class I and II CDL62_RS02670 PF00800 Prephenate dehydratase CDL62_RS02680 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDL62_RS02680 PF00072 Response regulator receiver domain CDL62_RS02680 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS02680 PF00989 PAS fold CDL62_RS02680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS02680 PF01627 Hpt domain CDL62_RS02695 PF02405 Permease MlaE CDL62_RS02700 PF00005 ABC transporter CDL62_RS02705 PF12848 ABC transporter CDL62_RS02705 PF00005 ABC transporter CDL62_RS02705 PF16326 ABC transporter C-terminal domain CDL62_RS02710 PF00248 Aldo/keto reductase family CDL62_RS02720 PF00924 Mechanosensitive ion channel CDL62_RS02725 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDL62_RS02725 PF00578 AhpC/TSA family CDL62_RS02730 PF07687 Peptidase dimerisation domain CDL62_RS02730 PF01546 Peptidase family M20/M25/M40 CDL62_RS02740 PF09180 Prolyl-tRNA synthetase, C-terminal CDL62_RS02740 PF03129 Anticodon binding domain CDL62_RS02740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDL62_RS02755 PF02915 Rubrerythrin CDL62_RS02760 PF02911 Formyl transferase, C-terminal domain CDL62_RS02760 PF00551 Formyl transferase CDL62_RS02765 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CDL62_RS02765 PF10135 Rod binding protein CDL62_RS02770 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDL62_RS02775 PF02609 Exonuclease VII small subunit CDL62_RS02780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS02780 PF00072 Response regulator receiver domain CDL62_RS02780 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS02780 PF08448 PAS fold CDL62_RS02780 PF13426 PAS domain CDL62_RS02785 PF13742 OB-fold nucleic acid binding domain CDL62_RS02785 PF02601 Exonuclease VII, large subunit CDL62_RS02795 PF00012 Hsp70 protein CDL62_RS02800 PF01180 Dihydroorotate dehydrogenase CDL62_RS02805 PF00925 GTP cyclohydrolase II CDL62_RS02805 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CDL62_RS02825 PF02082 Transcriptional regulator CDL62_RS02830 PF00291 Pyridoxal-phosphate dependent enzyme CDL62_RS02835 PF00258 Flavodoxin CDL62_RS02835 PF00175 Oxidoreductase NAD-binding domain CDL62_RS02835 PF00667 FAD binding domain CDL62_RS02840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDL62_RS02840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDL62_RS02850 PF10414 Sirohaem synthase dimerisation region CDL62_RS02850 PF14824 Sirohaem biosynthesis protein central CDL62_RS02850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDL62_RS02855 PF02602 Uroporphyrinogen-III synthase HemD CDL62_RS02855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDL62_RS02870 PF00291 Pyridoxal-phosphate dependent enzyme CDL62_RS02875 PF00742 Homoserine dehydrogenase CDL62_RS02875 PF01842 ACT domain CDL62_RS02875 PF03447 Homoserine dehydrogenase, NAD binding domain CDL62_RS02895 PF08447 PAS fold CDL62_RS02895 PF08448 PAS fold CDL62_RS02895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS02900 PF00072 Response regulator receiver domain CDL62_RS02910 PF08241 Methyltransferase domain CDL62_RS02915 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS02915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS02920 PF00072 Response regulator receiver domain CDL62_RS02920 PF00486 Transcriptional regulatory protein, C terminal CDL62_RS02955 PF13407 Periplasmic binding protein domain CDL62_RS02960 PF01769 Divalent cation transporter CDL62_RS02960 PF00571 CBS domain CDL62_RS02960 PF03448 MgtE intracellular N domain CDL62_RS02965 PF00529 HlyD membrane-fusion protein of T1SS CDL62_RS02965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDL62_RS02970 PF00873 AcrB/AcrD/AcrF family CDL62_RS02975 PF02321 Outer membrane efflux protein CDL62_RS02980 PF13734 Spi protease inhibitor CDL62_RS02980 PF01640 Peptidase C10 family CDL62_RS02990 PF03781 Sulfatase-modifying factor enzyme 1 CDL62_RS03005 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CDL62_RS03005 PF07676 WD40-like Beta Propeller Repeat CDL62_RS03005 PF00326 Prolyl oligopeptidase family CDL62_RS03035 PF10576 Iron-sulfur binding domain of endonuclease III CDL62_RS03035 PF00730 HhH-GPD superfamily base excision DNA repair protein CDL62_RS03035 PF00633 Helix-hairpin-helix motif CDL62_RS03040 PF02535 ZIP Zinc transporter CDL62_RS03045 PF00245 Alkaline phosphatase CDL62_RS03070 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CDL62_RS03070 PF01048 Phosphorylase superfamily CDL62_RS03085 PF01063 Amino-transferase class IV CDL62_RS03090 PF02622 Uncharacterized ACR, COG1678 CDL62_RS03120 PF00535 Glycosyl transferase family 2 CDL62_RS03150 PF00210 Ferritin-like domain CDL62_RS03160 PF00694 Aconitase C-terminal domain CDL62_RS03160 PF00330 Aconitase family (aconitate hydratase) CDL62_RS03175 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDL62_RS03175 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDL62_RS03180 PF00578 AhpC/TSA family CDL62_RS03180 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDL62_RS03185 PF00899 ThiF family CDL62_RS03195 PF00072 Response regulator receiver domain CDL62_RS03195 PF00196 Bacterial regulatory proteins, luxR family CDL62_RS03205 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS03205 PF00593 TonB dependent receptor CDL62_RS03215 PF12450 von Willebrand factor CDL62_RS03215 PF00092 von Willebrand factor type A domain CDL62_RS03215 PF12034 Domain of unknown function (DUF3520) CDL62_RS03225 PF01381 Helix-turn-helix CDL62_RS03235 PF02954 Bacterial regulatory protein, Fis family CDL62_RS03235 PF01590 GAF domain CDL62_RS03235 PF00158 Sigma-54 interaction domain CDL62_RS03240 PF00814 Glycoprotease family CDL62_RS03240 PF00583 Acetyltransferase (GNAT) family CDL62_RS03275 PF00413 Matrixin CDL62_RS03290 PF00413 Matrixin CDL62_RS03295 PF16326 ABC transporter C-terminal domain CDL62_RS03295 PF00005 ABC transporter CDL62_RS03295 PF12848 ABC transporter CDL62_RS03305 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CDL62_RS03310 PF00543 Nitrogen regulatory protein P-II CDL62_RS03315 PF00543 Nitrogen regulatory protein P-II CDL62_RS03320 PF00148 Nitrogenase component 1 type Oxidoreductase CDL62_RS03325 PF00148 Nitrogenase component 1 type Oxidoreductase CDL62_RS03330 PF01043 SecA preprotein cross-linking domain CDL62_RS03330 PF07516 SecA Wing and Scaffold domain CDL62_RS03330 PF07517 SecA DEAD-like domain CDL62_RS03330 PF02810 SEC-C motif CDL62_RS03335 PF00148 Nitrogenase component 1 type Oxidoreductase CDL62_RS03340 PF00148 Nitrogenase component 1 type Oxidoreductase CDL62_RS03345 PF02579 Dinitrogenase iron-molybdenum cofactor CDL62_RS03345 PF04055 Radical SAM superfamily CDL62_RS03355 PF00682 HMGL-like CDL62_RS03360 PF03459 TOBE domain CDL62_RS03365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDL62_RS03365 PF03459 TOBE domain CDL62_RS03370 PF18389 TrmO C-terminal domain CDL62_RS03370 PF01980 tRNA-methyltransferase O CDL62_RS03380 PF03459 TOBE domain CDL62_RS03385 PF00528 Binding-protein-dependent transport system inner membrane component CDL62_RS03390 PF12857 TOBE-like domain CDL62_RS03390 PF00005 ABC transporter CDL62_RS03410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS03410 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS03410 PF00072 Response regulator receiver domain CDL62_RS03410 PF09308 LuxQ, periplasmic CDL62_RS03420 PF07683 Cobalamin synthesis protein cobW C-terminal domain CDL62_RS03420 PF02492 CobW/HypB/UreG, nucleotide-binding domain CDL62_RS03425 PF02492 CobW/HypB/UreG, nucleotide-binding domain CDL62_RS03425 PF07683 Cobalamin synthesis protein cobW C-terminal domain CDL62_RS03430 PF00005 ABC transporter CDL62_RS03445 PF01888 CbiD CDL62_RS03460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDL62_RS03465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDL62_RS03470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDL62_RS03470 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDL62_RS03475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDL62_RS03480 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDL62_RS03480 PF07685 CobB/CobQ-like glutamine amidotransferase domain CDL62_RS03485 PF07685 CobB/CobQ-like glutamine amidotransferase domain CDL62_RS03485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDL62_RS03490 PF06180 Cobalt chelatase (CbiK) CDL62_RS03500 PF00701 Dihydrodipicolinate synthetase family CDL62_RS03505 PF00881 Nitroreductase family CDL62_RS03515 PF02386 Cation transport protein CDL62_RS03525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDL62_RS03525 PF02203 Tar ligand binding domain homologue CDL62_RS03525 PF00672 HAMP domain CDL62_RS03530 PF01300 Telomere recombination CDL62_RS03535 PF01370 NAD dependent epimerase/dehydratase family CDL62_RS03545 PF02954 Bacterial regulatory protein, Fis family CDL62_RS03545 PF00072 Response regulator receiver domain CDL62_RS03545 PF00158 Sigma-54 interaction domain CDL62_RS03550 PF00072 Response regulator receiver domain CDL62_RS03550 PF09308 LuxQ, periplasmic CDL62_RS03550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS03550 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS03555 PF02254 TrkA-N domain CDL62_RS03555 PF02080 TrkA-C domain CDL62_RS03560 PF13567 Domain of unknown function (DUF4131) CDL62_RS03560 PF00753 Metallo-beta-lactamase superfamily CDL62_RS03560 PF03772 Competence protein CDL62_RS03565 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CDL62_RS03565 PF02563 Polysaccharide biosynthesis/export protein CDL62_RS03565 PF10531 SLBB domain CDL62_RS03570 PF13614 AAA domain CDL62_RS03570 PF02706 Chain length determinant protein CDL62_RS03570 PF13807 G-rich domain on putative tyrosine kinase CDL62_RS03585 PF02719 Polysaccharide biosynthesis protein CDL62_RS03590 PF01433 Peptidase family M1 domain CDL62_RS03590 PF11838 ERAP1-like C-terminal domain CDL62_RS03595 PF11838 ERAP1-like C-terminal domain CDL62_RS03595 PF01433 Peptidase family M1 domain CDL62_RS03600 PF01433 Peptidase family M1 domain CDL62_RS03600 PF11838 ERAP1-like C-terminal domain CDL62_RS03610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CDL62_RS03625 PF02397 Bacterial sugar transferase CDL62_RS03630 PF00535 Glycosyl transferase family 2 CDL62_RS03640 PF13439 Glycosyltransferase Family 4 CDL62_RS03640 PF00534 Glycosyl transferases group 1 CDL62_RS03645 PF00534 Glycosyl transferases group 1 CDL62_RS03645 PF13439 Glycosyltransferase Family 4 CDL62_RS03675 PF02350 UDP-N-acetylglucosamine 2-epimerase CDL62_RS03680 PF08666 SAF domain CDL62_RS03680 PF03102 NeuB family CDL62_RS03690 PF00535 Glycosyl transferase family 2 CDL62_RS03695 PF00535 Glycosyl transferase family 2 CDL62_RS03700 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CDL62_RS03710 PF01757 Acyltransferase family CDL62_RS03720 PF12464 Maltose acetyltransferase CDL62_RS03720 PF14602 Hexapeptide repeat of succinyl-transferase CDL62_RS03730 PF05523 WxcM-like, C-terminal CDL62_RS03735 PF05523 WxcM-like, C-terminal CDL62_RS03740 PF00005 ABC transporter CDL62_RS03740 PF00664 ABC transporter transmembrane region CDL62_RS03780 PF01327 Polypeptide deformylase CDL62_RS03785 PF03652 Holliday junction resolvase CDL62_RS03790 PF00391 PEP-utilising enzyme, mobile domain CDL62_RS03790 PF02896 PEP-utilising enzyme, TIM barrel domain CDL62_RS03790 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CDL62_RS03795 PF01180 Dihydroorotate dehydrogenase CDL62_RS03800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDL62_RS03800 PF07497 Rho termination factor, RNA-binding domain CDL62_RS03810 PF04545 Sigma-70, region 4 CDL62_RS03810 PF00140 Sigma-70 factor, region 1.2 CDL62_RS03810 PF03979 Sigma-70 factor, region 1.1 CDL62_RS03810 PF04539 Sigma-70 region 3 CDL62_RS03810 PF04542 Sigma-70 region 2 CDL62_RS03815 PF00834 Ribulose-phosphate 3 epimerase family CDL62_RS03835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS03835 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS03840 PF01339 CheB methylesterase CDL62_RS03840 PF00072 Response regulator receiver domain CDL62_RS03845 PF01739 CheR methyltransferase, SAM binding domain CDL62_RS03845 PF03705 CheR methyltransferase, all-alpha domain CDL62_RS03850 PF00672 HAMP domain CDL62_RS03850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDL62_RS03850 PF02203 Tar ligand binding domain homologue CDL62_RS03855 PF01584 CheW-like domain CDL62_RS03860 PF01584 CheW-like domain CDL62_RS03860 PF09078 CheY binding CDL62_RS03860 PF02895 Signal transducing histidine kinase, homodimeric domain CDL62_RS03860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS03860 PF01627 Hpt domain CDL62_RS03865 PF00072 Response regulator receiver domain CDL62_RS03870 PF00672 HAMP domain CDL62_RS03870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS03870 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS03870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS03870 PF00072 Response regulator receiver domain CDL62_RS03870 PF01627 Hpt domain CDL62_RS03875 PF09308 LuxQ, periplasmic CDL62_RS03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS03875 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS03875 PF00072 Response regulator receiver domain CDL62_RS03880 PF00027 Cyclic nucleotide-binding domain CDL62_RS03880 PF13545 Crp-like helix-turn-helix domain CDL62_RS03905 PF04397 LytTr DNA-binding domain CDL62_RS03915 PF05547 Immune inhibitor A peptidase M6 CDL62_RS03920 PF01713 Smr domain CDL62_RS03920 PF00488 MutS domain V CDL62_RS03935 PF02548 Ketopantoate hydroxymethyltransferase CDL62_RS03940 PF01479 S4 domain CDL62_RS03940 PF00849 RNA pseudouridylate synthase CDL62_RS03955 PF00085 Thioredoxin CDL62_RS03960 PF00085 Thioredoxin CDL62_RS03965 PF01743 Poly A polymerase head domain CDL62_RS03965 PF02272 DHHA1 domain CDL62_RS03965 PF01368 DHH family CDL62_RS03965 PF00571 CBS domain CDL62_RS03995 PF00056 lactate/malate dehydrogenase, NAD binding domain CDL62_RS03995 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CDL62_RS04010 PF02687 FtsX-like permease family CDL62_RS04010 PF00005 ABC transporter CDL62_RS04010 PF12704 MacB-like periplasmic core domain CDL62_RS04020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDL62_RS04020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDL62_RS04020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDL62_RS04020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDL62_RS04025 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS04025 PF07495 Y_Y_Y domain CDL62_RS04025 PF00072 Response regulator receiver domain CDL62_RS04025 PF07494 Two component regulator propeller CDL62_RS04025 PF12833 Helix-turn-helix domain CDL62_RS04030 PF00849 RNA pseudouridylate synthase CDL62_RS04030 PF01479 S4 domain CDL62_RS04040 PF02678 Pirin CDL62_RS04040 PF05726 Pirin C-terminal cupin domain CDL62_RS04050 PF13732 Domain of unknown function (DUF4162) CDL62_RS04050 PF00005 ABC transporter CDL62_RS04055 PF01061 ABC-2 type transporter CDL62_RS04060 PF08713 DNA alkylation repair enzyme CDL62_RS04070 PF05190 MutS family domain IV CDL62_RS04070 PF00488 MutS domain V CDL62_RS04070 PF05192 MutS domain III CDL62_RS04070 PF01624 MutS domain I CDL62_RS04070 PF05188 MutS domain II CDL62_RS04100 PF00535 Glycosyl transferase family 2 CDL62_RS04105 PF01979 Amidohydrolase family CDL62_RS04115 PF00696 Amino acid kinase family CDL62_RS04115 PF01842 ACT domain CDL62_RS04120 PF02559 CarD-like/TRCF domain CDL62_RS04120 PF00270 DEAD/DEAH box helicase CDL62_RS04120 PF00271 Helicase conserved C-terminal domain CDL62_RS04120 PF03461 TRCF domain CDL62_RS04120 PF17757 UvrB interaction domain CDL62_RS04125 PF00196 Bacterial regulatory proteins, luxR family CDL62_RS04125 PF00072 Response regulator receiver domain CDL62_RS04130 PF03309 Type III pantothenate kinase CDL62_RS04150 PF01595 Cyclin M transmembrane N-terminal domain CDL62_RS04150 PF03471 Transporter associated domain CDL62_RS04150 PF00571 CBS domain CDL62_RS04155 PF05698 Bacterial trigger factor protein (TF) C-terminus CDL62_RS04160 PF09424 Yqey-like protein CDL62_RS04165 PF12327 FtsZ family, C-terminal domain CDL62_RS04165 PF00091 Tubulin/FtsZ family, GTPase domain CDL62_RS04170 PF02491 SHS2 domain inserted in FTSA CDL62_RS04180 PF01225 Mur ligase family, catalytic domain CDL62_RS04180 PF08245 Mur ligase middle domain CDL62_RS04180 PF02875 Mur ligase family, glutamate ligase domain CDL62_RS04185 PF03033 Glycosyltransferase family 28 N-terminal domain CDL62_RS04185 PF04101 Glycosyltransferase family 28 C-terminal domain CDL62_RS04190 PF01098 Cell cycle protein CDL62_RS04195 PF02875 Mur ligase family, glutamate ligase domain CDL62_RS04195 PF08245 Mur ligase middle domain CDL62_RS04200 PF00953 Glycosyl transferase family 4 CDL62_RS04200 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CDL62_RS04205 PF02875 Mur ligase family, glutamate ligase domain CDL62_RS04205 PF01225 Mur ligase family, catalytic domain CDL62_RS04205 PF08245 Mur ligase middle domain CDL62_RS04210 PF00905 Penicillin binding protein transpeptidase domain CDL62_RS04210 PF03717 Penicillin-binding Protein dimerisation domain CDL62_RS04210 PF03793 PASTA domain CDL62_RS04220 PF01795 MraW methylase family CDL62_RS04225 PF02381 MraZ protein, putative antitoxin-like CDL62_RS04240 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDL62_RS04240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDL62_RS04245 PF00144 Beta-lactamase CDL62_RS04250 PF00156 Phosphoribosyl transferase domain CDL62_RS04290 PF02938 GAD domain CDL62_RS04290 PF00152 tRNA synthetases class II (D, K and N) CDL62_RS04290 PF01336 OB-fold nucleic acid binding domain CDL62_RS04295 PF14437 MafB19-like deaminase CDL62_RS04300 PF05970 PIF1-like helicase CDL62_RS04310 PF13520 Amino acid permease CDL62_RS04325 PF01758 Sodium Bile acid symporter family CDL62_RS04330 PF00501 AMP-binding enzyme CDL62_RS04340 PF01875 Memo-like protein CDL62_RS04380 PF01926 50S ribosome-binding GTPase CDL62_RS04380 PF06071 Protein of unknown function (DUF933) CDL62_RS04390 PF04542 Sigma-70 region 2 CDL62_RS04390 PF08281 Sigma-70, region 4 CDL62_RS04405 PF13393 Histidyl-tRNA synthetase CDL62_RS04405 PF03129 Anticodon binding domain CDL62_RS04415 PF13416 Bacterial extracellular solute-binding protein CDL62_RS04420 PF00528 Binding-protein-dependent transport system inner membrane component CDL62_RS04425 PF08402 TOBE domain CDL62_RS04425 PF00005 ABC transporter CDL62_RS04445 PF00211 Adenylate and Guanylate cyclase catalytic domain CDL62_RS04455 PF00005 ABC transporter CDL62_RS04455 PF12848 ABC transporter CDL62_RS04480 PF00672 HAMP domain CDL62_RS04480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS04480 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS04480 PF01627 Hpt domain CDL62_RS04480 PF00072 Response regulator receiver domain CDL62_RS04480 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS04485 PF07495 Y_Y_Y domain CDL62_RS04485 PF00072 Response regulator receiver domain CDL62_RS04485 PF07494 Two component regulator propeller CDL62_RS04485 PF12833 Helix-turn-helix domain CDL62_RS04485 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS04485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS04490 PF00285 Citrate synthase, C-terminal domain CDL62_RS04495 PF00113 Enolase, C-terminal TIM barrel domain CDL62_RS04495 PF03952 Enolase, N-terminal domain CDL62_RS04500 PF01196 Ribosomal protein L17 CDL62_RS04505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CDL62_RS04505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CDL62_RS04505 PF01000 RNA polymerase Rpb3/RpoA insert domain CDL62_RS04510 PF01479 S4 domain CDL62_RS04510 PF00163 Ribosomal protein S4/S9 N-terminal domain CDL62_RS04515 PF00411 Ribosomal protein S11 CDL62_RS04520 PF00416 Ribosomal protein S13/S18 CDL62_RS04525 PF00444 Ribosomal protein L36 CDL62_RS04530 PF01176 Translation initiation factor 1A / IF-1 CDL62_RS04535 PF00557 Metallopeptidase family M24 CDL62_RS04540 PF00344 SecY translocase CDL62_RS04545 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CDL62_RS04550 PF00327 Ribosomal protein L30p/L7e CDL62_RS04555 PF03719 Ribosomal protein S5, C-terminal domain CDL62_RS04555 PF00333 Ribosomal protein S5, N-terminal domain CDL62_RS04560 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CDL62_RS04565 PF00347 Ribosomal protein L6 CDL62_RS04570 PF00410 Ribosomal protein S8 CDL62_RS04575 PF00253 Ribosomal protein S14p/S29e CDL62_RS04580 PF00281 Ribosomal protein L5 CDL62_RS04580 PF00673 ribosomal L5P family C-terminus CDL62_RS04585 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CDL62_RS04585 PF00467 KOW motif CDL62_RS04590 PF00238 Ribosomal protein L14p/L23e CDL62_RS04595 PF00366 Ribosomal protein S17 CDL62_RS04600 PF00831 Ribosomal L29 protein CDL62_RS04605 PF00252 Ribosomal protein L16p/L10e CDL62_RS04610 PF07650 KH domain CDL62_RS04610 PF00189 Ribosomal protein S3, C-terminal domain CDL62_RS04615 PF00237 Ribosomal protein L22p/L17e CDL62_RS04620 PF00203 Ribosomal protein S19 CDL62_RS04625 PF03947 Ribosomal Proteins L2, C-terminal domain CDL62_RS04625 PF00181 Ribosomal Proteins L2, RNA binding domain CDL62_RS04630 PF00276 Ribosomal protein L23 CDL62_RS04635 PF00573 Ribosomal protein L4/L1 family CDL62_RS04640 PF00297 Ribosomal protein L3 CDL62_RS04645 PF00338 Ribosomal protein S10p/S20e CDL62_RS04650 PF03144 Elongation factor Tu domain 2 CDL62_RS04650 PF00009 Elongation factor Tu GTP binding domain CDL62_RS04650 PF14492 Elongation Factor G, domain II CDL62_RS04650 PF00679 Elongation factor G C-terminus CDL62_RS04650 PF03764 Elongation factor G, domain IV CDL62_RS04655 PF00177 Ribosomal protein S7p/S5e CDL62_RS04660 PF00164 Ribosomal protein S12/S23 CDL62_RS04665 PF00698 Acyl transferase domain CDL62_RS04670 PF00585 C-terminal regulatory domain of Threonine dehydratase CDL62_RS04670 PF00291 Pyridoxal-phosphate dependent enzyme CDL62_RS04685 PF03033 Glycosyltransferase family 28 N-terminal domain CDL62_RS04685 PF04101 Glycosyltransferase family 28 C-terminal domain CDL62_RS04715 PF07650 KH domain CDL62_RS04715 PF01926 50S ribosome-binding GTPase CDL62_RS04720 PF01926 50S ribosome-binding GTPase CDL62_RS04720 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CDL62_RS04730 PF01842 ACT domain CDL62_RS04730 PF00551 Formyl transferase CDL62_RS04735 PF00117 Glutamine amidotransferase class-I CDL62_RS04745 PF00977 Histidine biosynthesis protein CDL62_RS04765 PF04616 Glycosyl hydrolases family 43 CDL62_RS04780 PF18541 RuvC endonuclease subdomain 3 CDL62_RS04780 PF13395 HNH endonuclease CDL62_RS04780 PF18470 Cas9 alpha-helical lobe domain CDL62_RS04790 PF01867 CRISPR associated protein Cas1 CDL62_RS04795 PF09827 CRISPR associated protein Cas2 CDL62_RS04810 PF07689 KaiB domain CDL62_RS04810 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS04810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS04815 PF02646 RmuC family CDL62_RS04820 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CDL62_RS04820 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CDL62_RS04830 PF02590 Predicted SPOUT methyltransferase CDL62_RS04835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS04835 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS04835 PF00672 HAMP domain CDL62_RS04845 PF00196 Bacterial regulatory proteins, luxR family CDL62_RS04845 PF00072 Response regulator receiver domain CDL62_RS04855 PF00561 alpha/beta hydrolase fold CDL62_RS04860 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CDL62_RS04875 PF01513 ATP-NAD kinase CDL62_RS04885 PF01255 Putative undecaprenyl diphosphate synthase CDL62_RS04890 PF07244 Surface antigen variable number repeat CDL62_RS04890 PF01103 Surface antigen CDL62_RS04910 PF01177 Asp/Glu/Hydantoin racemase CDL62_RS04915 PF00132 Bacterial transferase hexapeptide (six repeats) CDL62_RS04920 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CDL62_RS04920 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CDL62_RS04920 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CDL62_RS04925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDL62_RS04990 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDL62_RS04990 PF01464 Transglycosylase SLT domain CDL62_RS04995 PF00293 NUDIX domain CDL62_RS05000 PF02687 FtsX-like permease family CDL62_RS05000 PF12704 MacB-like periplasmic core domain CDL62_RS05005 PF02641 Uncharacterized ACR, COG1993 CDL62_RS05010 PF03144 Elongation factor Tu domain 2 CDL62_RS05010 PF14492 Elongation Factor G, domain II CDL62_RS05010 PF00679 Elongation factor G C-terminus CDL62_RS05010 PF00009 Elongation factor Tu GTP binding domain CDL62_RS05010 PF03764 Elongation factor G, domain IV CDL62_RS05015 PF00290 Tryptophan synthase alpha chain CDL62_RS05020 PF00291 Pyridoxal-phosphate dependent enzyme CDL62_RS05025 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CDL62_RS05030 PF00218 Indole-3-glycerol phosphate synthase CDL62_RS05040 PF01609 Transposase DDE domain CDL62_RS05050 PF14310 Fibronectin type III-like domain CDL62_RS05050 PF01915 Glycosyl hydrolase family 3 C-terminal domain CDL62_RS05050 PF00933 Glycosyl hydrolase family 3 N terminal domain CDL62_RS05055 PF00150 Cellulase (glycosyl hydrolase family 5) CDL62_RS05055 PF00553 Cellulose binding domain CDL62_RS05070 PF07980 SusD family CDL62_RS05070 PF14322 Starch-binding associating with outer membrane CDL62_RS05075 PF00593 TonB dependent receptor CDL62_RS05075 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS05085 PF02885 Glycosyl transferase family, helical bundle domain CDL62_RS05085 PF00591 Glycosyl transferase family, a/b domain CDL62_RS05120 PF00591 Glycosyl transferase family, a/b domain CDL62_RS05120 PF02885 Glycosyl transferase family, helical bundle domain CDL62_RS05125 PF00117 Glutamine amidotransferase class-I CDL62_RS05125 PF00591 Glycosyl transferase family, a/b domain CDL62_RS05125 PF02885 Glycosyl transferase family, helical bundle domain CDL62_RS05130 PF04715 Anthranilate synthase component I, N terminal region CDL62_RS05130 PF00425 chorismate binding enzyme CDL62_RS05175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDL62_RS05175 PF03466 LysR substrate binding domain CDL62_RS05180 PF00226 DnaJ domain CDL62_RS05180 PF01556 DnaJ C terminal domain CDL62_RS05180 PF00684 DnaJ central domain CDL62_RS05185 PF01025 GrpE CDL62_RS05195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDL62_RS05205 PF00580 UvrD/REP helicase N-terminal domain CDL62_RS05205 PF13361 UvrD-like helicase C-terminal domain CDL62_RS05220 PF00485 Phosphoribulokinase / Uridine kinase family CDL62_RS05230 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CDL62_RS05230 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CDL62_RS05235 PF01842 ACT domain CDL62_RS05235 PF00696 Amino acid kinase family CDL62_RS05240 PF01238 Phosphomannose isomerase type I CDL62_RS05245 PF01926 50S ribosome-binding GTPase CDL62_RS05250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CDL62_RS05250 PF14572 Phosphoribosyl synthetase-associated domain CDL62_RS05255 PF14693 Ribosomal protein TL5, C-terminal domain CDL62_RS05255 PF01386 Ribosomal L25p family CDL62_RS05260 PF01195 Peptidyl-tRNA hydrolase CDL62_RS05265 PF01479 S4 domain CDL62_RS05295 PF00691 OmpA family CDL62_RS05300 PF02683 Cytochrome C biogenesis protein transmembrane region CDL62_RS05300 PF11412 Disulphide bond corrector protein DsbC CDL62_RS05305 PF00133 tRNA synthetases class I (I, L, M and V) CDL62_RS05305 PF08264 Anticodon-binding domain of tRNA CDL62_RS05305 PF10458 Valyl tRNA synthetase tRNA binding arm CDL62_RS05325 PF00072 Response regulator receiver domain CDL62_RS05325 PF00196 Bacterial regulatory proteins, luxR family CDL62_RS05330 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS05330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS05330 PF09308 LuxQ, periplasmic CDL62_RS05330 PF00072 Response regulator receiver domain CDL62_RS05340 PF00155 Aminotransferase class I and II CDL62_RS05350 PF01884 PcrB family CDL62_RS05365 PF03471 Transporter associated domain CDL62_RS05365 PF00571 CBS domain CDL62_RS05370 PF00436 Single-strand binding protein family CDL62_RS05375 PF00633 Helix-hairpin-helix motif CDL62_RS05375 PF00730 HhH-GPD superfamily base excision DNA repair protein CDL62_RS05375 PF14815 NUDIX domain CDL62_RS05380 PF00216 Bacterial DNA-binding protein CDL62_RS05385 PF10150 Ribonuclease E/G family CDL62_RS05385 PF00575 S1 RNA binding domain CDL62_RS05390 PF00999 Sodium/hydrogen exchanger family CDL62_RS05390 PF00582 Universal stress protein family CDL62_RS05400 PF01814 Hemerythrin HHE cation binding domain CDL62_RS05400 PF04405 Domain of Unknown function (DUF542) CDL62_RS05405 PF02082 Transcriptional regulator CDL62_RS05410 PF00005 ABC transporter CDL62_RS05410 PF13732 Domain of unknown function (DUF4162) CDL62_RS05420 PF02541 Ppx/GppA phosphatase family CDL62_RS05425 PF00158 Sigma-54 interaction domain CDL62_RS05425 PF02954 Bacterial regulatory protein, Fis family CDL62_RS05425 PF00072 Response regulator receiver domain CDL62_RS05440 PF01926 50S ribosome-binding GTPase CDL62_RS05440 PF12631 MnmE helical domain CDL62_RS05440 PF10396 GTP-binding protein TrmE N-terminus CDL62_RS05465 PF00175 Oxidoreductase NAD-binding domain CDL62_RS05465 PF00111 2Fe-2S iron-sulfur cluster binding domain CDL62_RS05465 PF00970 Oxidoreductase FAD-binding domain CDL62_RS05470 PF07690 Major Facilitator Superfamily CDL62_RS05485 PF00132 Bacterial transferase hexapeptide (six repeats) CDL62_RS05485 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CDL62_RS05490 PF04616 Glycosyl hydrolases family 43 CDL62_RS05560 PF00117 Glutamine amidotransferase class-I CDL62_RS05560 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CDL62_RS05565 PF00285 Citrate synthase, C-terminal domain CDL62_RS05570 PF00206 Lyase CDL62_RS05580 PF00696 Amino acid kinase family CDL62_RS05585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDL62_RS05585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDL62_RS05590 PF00171 Aldehyde dehydrogenase family CDL62_RS05595 PF01472 PUA domain CDL62_RS05595 PF00696 Amino acid kinase family CDL62_RS05600 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CDL62_RS05600 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CDL62_RS05610 PF00202 Aminotransferase class-III CDL62_RS05615 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDL62_RS05615 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDL62_RS05620 PF00764 Arginosuccinate synthase CDL62_RS05630 PF01316 Arginine repressor, DNA binding domain CDL62_RS05630 PF02863 Arginine repressor, C-terminal domain CDL62_RS05635 PF02142 MGS-like domain CDL62_RS05635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDL62_RS05635 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDL62_RS05640 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CDL62_RS05640 PF14508 Glycosyl-hydrolase 97 N-terminal CDL62_RS05640 PF10566 Glycoside hydrolase 97 CDL62_RS05645 PF01066 CDP-alcohol phosphatidyltransferase CDL62_RS05650 PF00672 HAMP domain CDL62_RS05650 PF17200 Single Cache domain 2 CDL62_RS05650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDL62_RS05660 PF01814 Hemerythrin HHE cation binding domain CDL62_RS05665 PF01642 Methylmalonyl-CoA mutase CDL62_RS05665 PF02310 B12 binding domain CDL62_RS05675 PF01642 Methylmalonyl-CoA mutase CDL62_RS05680 PF02447 GntP family permease CDL62_RS05690 PF01467 Cytidylyltransferase-like CDL62_RS05700 PF00756 Putative esterase CDL62_RS05700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CDL62_RS05710 PF00248 Aldo/keto reductase family CDL62_RS05720 PF00475 Imidazoleglycerol-phosphate dehydratase CDL62_RS05725 PF07859 alpha/beta hydrolase fold CDL62_RS05725 PF13472 GDSL-like Lipase/Acylhydrolase family CDL62_RS05730 PF00155 Aminotransferase class I and II CDL62_RS05735 PF00815 Histidinol dehydrogenase CDL62_RS05740 PF01634 ATP phosphoribosyltransferase CDL62_RS05740 PF08029 HisG, C-terminal domain CDL62_RS05745 PF01156 Inosine-uridine preferring nucleoside hydrolase CDL62_RS05770 PF01654 Cytochrome bd terminal oxidase subunit I CDL62_RS05775 PF02322 Cytochrome bd terminal oxidase subunit II CDL62_RS05790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDL62_RS05795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDL62_RS05800 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDL62_RS05805 PF00293 NUDIX domain CDL62_RS05810 PF00156 Phosphoribosyl transferase domain CDL62_RS05820 PF02237 Biotin protein ligase C terminal domain CDL62_RS05820 PF03099 Biotin/lipoate A/B protein ligase family CDL62_RS05820 PF08279 HTH domain CDL62_RS05830 PF01434 Peptidase family M41 CDL62_RS05830 PF17862 AAA+ lid domain CDL62_RS05830 PF00004 ATPase family associated with various cellular activities (AAA) CDL62_RS05835 PF02589 LUD domain CDL62_RS05845 PF02666 Phosphatidylserine decarboxylase CDL62_RS05870 PF07495 Y_Y_Y domain CDL62_RS05870 PF07494 Two component regulator propeller CDL62_RS05870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS05870 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS05870 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS05870 PF12833 Helix-turn-helix domain CDL62_RS05870 PF12833 Helix-turn-helix domain CDL62_RS05870 PF07495 Y_Y_Y domain CDL62_RS05870 PF07494 Two component regulator propeller CDL62_RS05870 PF00072 Response regulator receiver domain CDL62_RS05870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS05870 PF00072 Response regulator receiver domain CDL62_RS05895 PF13396 Phospholipase_D-nuclease N-terminal CDL62_RS05895 PF13091 PLD-like domain CDL62_RS05900 PF01872 RibD C-terminal domain CDL62_RS05900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDL62_RS05905 PF17827 PrmC N-terminal domain CDL62_RS05905 PF05175 Methyltransferase small domain CDL62_RS05920 PF00578 AhpC/TSA family CDL62_RS05925 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CDL62_RS05925 PF02837 Glycosyl hydrolases family 2, sugar binding domain CDL62_RS05925 PF00703 Glycosyl hydrolases family 2 CDL62_RS05925 PF16353 Domain of unknown function(DUF4981) CDL62_RS05925 PF02929 Beta galactosidase small chain CDL62_RS05960 PF02449 Beta-galactosidase CDL62_RS05960 PF08532 Beta-galactosidase trimerisation domain CDL62_RS05960 PF08533 Beta-galactosidase C-terminal domain CDL62_RS05965 PF00326 Prolyl oligopeptidase family CDL62_RS05965 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CDL62_RS05975 PF08666 SAF domain CDL62_RS05975 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CDL62_RS05980 PF01232 Mannitol dehydrogenase Rossmann domain CDL62_RS05980 PF08125 Mannitol dehydrogenase C-terminal domain CDL62_RS05995 PF16353 Domain of unknown function(DUF4981) CDL62_RS05995 PF02929 Beta galactosidase small chain CDL62_RS05995 PF00703 Glycosyl hydrolases family 2 CDL62_RS05995 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CDL62_RS05995 PF02837 Glycosyl hydrolases family 2, sugar binding domain CDL62_RS06000 PF02401 LytB protein CDL62_RS06005 PF02224 Cytidylate kinase CDL62_RS06020 PF03553 Na+/H+ antiporter family CDL62_RS06025 PF00291 Pyridoxal-phosphate dependent enzyme CDL62_RS06030 PF03030 Inorganic H+ pyrophosphatase CDL62_RS06045 PF06689 ClpX C4-type zinc finger CDL62_RS06045 PF10431 C-terminal, D2-small domain, of ClpB protein CDL62_RS06045 PF07724 AAA domain (Cdc48 subfamily) CDL62_RS06050 PF00574 Clp protease CDL62_RS06055 PF05697 Bacterial trigger factor protein (TF) CDL62_RS06055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDL62_RS06055 PF05698 Bacterial trigger factor protein (TF) C-terminus CDL62_RS06065 PF00005 ABC transporter CDL62_RS06070 PF00902 Sec-independent protein translocase protein (TatC) CDL62_RS06075 PF09382 RQC domain CDL62_RS06075 PF00570 HRDC domain CDL62_RS06075 PF00271 Helicase conserved C-terminal domain CDL62_RS06075 PF00270 DEAD/DEAH box helicase CDL62_RS06075 PF16124 RecQ zinc-binding CDL62_RS06090 PF00156 Phosphoribosyl transferase domain CDL62_RS06100 PF01926 50S ribosome-binding GTPase CDL62_RS06100 PF01018 GTP1/OBG CDL62_RS06105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS06105 PF12833 Helix-turn-helix domain CDL62_RS06105 PF07494 Two component regulator propeller CDL62_RS06105 PF00072 Response regulator receiver domain CDL62_RS06105 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS06105 PF07495 Y_Y_Y domain CDL62_RS06110 PF04616 Glycosyl hydrolases family 43 CDL62_RS06115 PF01263 Aldose 1-epimerase CDL62_RS06125 PF07980 SusD family CDL62_RS06125 PF14322 Starch-binding associating with outer membrane CDL62_RS06130 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS06130 PF00593 TonB dependent receptor CDL62_RS06135 PF14322 Starch-binding associating with outer membrane CDL62_RS06135 PF07980 SusD family CDL62_RS06140 PF00593 TonB dependent receptor CDL62_RS06140 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS06150 PF04616 Glycosyl hydrolases family 43 CDL62_RS06150 PF16369 C-terminal lipocalin-like domain CDL62_RS06165 PF00703 Glycosyl hydrolases family 2 CDL62_RS06165 PF16353 Domain of unknown function(DUF4981) CDL62_RS06165 PF02837 Glycosyl hydrolases family 2, sugar binding domain CDL62_RS06165 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CDL62_RS06165 PF02929 Beta galactosidase small chain CDL62_RS06175 PF00756 Putative esterase CDL62_RS06175 PF00404 Dockerin type I domain CDL62_RS06175 PF03422 Carbohydrate binding module (family 6) CDL62_RS06175 PF00331 Glycosyl hydrolase family 10 CDL62_RS06180 PF04616 Glycosyl hydrolases family 43 CDL62_RS06180 PF03422 Carbohydrate binding module (family 6) CDL62_RS06185 PF00756 Putative esterase CDL62_RS06185 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase CDL62_RS06195 PF00135 Carboxylesterase family CDL62_RS06205 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase CDL62_RS06205 PF00756 Putative esterase CDL62_RS06215 PF00331 Glycosyl hydrolase family 10 CDL62_RS06215 PF00756 Putative esterase CDL62_RS06220 PF00756 Putative esterase CDL62_RS06220 PF00331 Glycosyl hydrolase family 10 CDL62_RS06225 PF00756 Putative esterase CDL62_RS06225 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase CDL62_RS06230 PF00135 Carboxylesterase family CDL62_RS06240 PF04616 Glycosyl hydrolases family 43 CDL62_RS06240 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CDL62_RS06255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDL62_RS06255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDL62_RS06265 PF17189 Glycosyl hydrolase family 30 beta sandwich domain CDL62_RS06275 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CDL62_RS06280 PF04616 Glycosyl hydrolases family 43 CDL62_RS06280 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CDL62_RS06285 PF04616 Glycosyl hydrolases family 43 CDL62_RS06285 PF03422 Carbohydrate binding module (family 6) CDL62_RS06290 PF10566 Glycoside hydrolase 97 CDL62_RS06290 PF14508 Glycosyl-hydrolase 97 N-terminal CDL62_RS06290 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CDL62_RS06300 PF00331 Glycosyl hydrolase family 10 CDL62_RS06305 PF01915 Glycosyl hydrolase family 3 C-terminal domain CDL62_RS06305 PF00933 Glycosyl hydrolase family 3 N terminal domain CDL62_RS06305 PF07691 PA14 domain CDL62_RS06305 PF14310 Fibronectin type III-like domain CDL62_RS06310 PF16338 Domain of unknown function (DUF4968) CDL62_RS06310 PF17137 Domain of unknown function (DUF5110) CDL62_RS06310 PF01055 Glycosyl hydrolases family 31 CDL62_RS06315 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CDL62_RS06315 PF10566 Glycoside hydrolase 97 CDL62_RS06315 PF14508 Glycosyl-hydrolase 97 N-terminal CDL62_RS06320 PF16338 Domain of unknown function (DUF4968) CDL62_RS06320 PF17137 Domain of unknown function (DUF5110) CDL62_RS06320 PF01055 Glycosyl hydrolases family 31 CDL62_RS06330 PF02837 Glycosyl hydrolases family 2, sugar binding domain CDL62_RS06330 PF00703 Glycosyl hydrolases family 2 CDL62_RS06330 PF16353 Domain of unknown function(DUF4981) CDL62_RS06330 PF02929 Beta galactosidase small chain CDL62_RS06330 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CDL62_RS06340 PF03422 Carbohydrate binding module (family 6) CDL62_RS06340 PF04616 Glycosyl hydrolases family 43 CDL62_RS06345 PF00107 Zinc-binding dehydrogenase CDL62_RS06345 PF08240 Alcohol dehydrogenase GroES-like domain CDL62_RS06350 PF00248 Aldo/keto reductase family CDL62_RS06355 PF07690 Major Facilitator Superfamily CDL62_RS06365 PF05025 RbsD / FucU transport protein family CDL62_RS06380 PF04616 Glycosyl hydrolases family 43 CDL62_RS06380 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CDL62_RS06385 PF03781 Sulfatase-modifying factor enzyme 1 CDL62_RS06390 PF00457 Glycosyl hydrolases family 11 CDL62_RS06395 PF00395 S-layer homology domain CDL62_RS06395 PF00150 Cellulase (glycosyl hydrolase family 5) CDL62_RS06395 PF03424 Carbohydrate binding domain (family 17/28) CDL62_RS06400 PF00331 Glycosyl hydrolase family 10 CDL62_RS06410 PF14322 Starch-binding associating with outer membrane CDL62_RS06410 PF07980 SusD family CDL62_RS06415 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS06415 PF00593 TonB dependent receptor CDL62_RS06425 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS06425 PF00593 TonB dependent receptor CDL62_RS06430 PF00072 Response regulator receiver domain CDL62_RS06430 PF07495 Y_Y_Y domain CDL62_RS06430 PF07494 Two component regulator propeller CDL62_RS06430 PF12833 Helix-turn-helix domain CDL62_RS06430 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS06435 PF01751 Toprim domain CDL62_RS06435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS06435 PF00986 DNA gyrase B subunit, carboxyl terminus CDL62_RS06435 PF00204 DNA gyrase B CDL62_RS06440 PF00521 DNA gyrase/topoisomerase IV, subunit A CDL62_RS06445 PF01202 Shikimate kinase CDL62_RS06455 PF01263 Aldose 1-epimerase CDL62_RS06460 PF00288 GHMP kinases N terminal domain CDL62_RS06460 PF08544 GHMP kinases C terminal CDL62_RS06460 PF10509 Galactokinase galactose-binding signature CDL62_RS06465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDL62_RS06470 PF00596 Class II Aldolase and Adducin N-terminal domain CDL62_RS06475 PF00474 Sodium:solute symporter family CDL62_RS06480 PF02610 L-arabinose isomerase CDL62_RS06480 PF11762 L-arabinose isomerase C-terminal domain CDL62_RS06495 PF00004 ATPase family associated with various cellular activities (AAA) CDL62_RS06495 PF05362 Lon protease (S16) C-terminal proteolytic domain CDL62_RS06495 PF02190 ATP-dependent protease La (LON) substrate-binding domain CDL62_RS06500 PF01197 Ribosomal protein L31 CDL62_RS06525 PF03462 PCRF domain CDL62_RS06525 PF00472 RF-1 domain CDL62_RS06530 PF03960 ArsC family CDL62_RS06535 PF01687 Riboflavin kinase CDL62_RS06535 PF06574 FAD synthetase CDL62_RS06540 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CDL62_RS06540 PF05221 S-adenosyl-L-homocysteine hydrolase CDL62_RS06555 PF01272 Transcription elongation factor, GreA/GreB, C-term CDL62_RS06555 PF03449 Transcription elongation factor, N-terminal CDL62_RS06560 PF01230 HIT domain CDL62_RS06565 PF02075 Crossover junction endodeoxyribonuclease RuvC CDL62_RS06575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDL62_RS06575 PF02403 Seryl-tRNA synthetase N-terminal domain CDL62_RS06580 PF01016 Ribosomal L27 protein CDL62_RS06585 PF00829 Ribosomal prokaryotic L21 protein CDL62_RS06650 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system CDL62_RS06655 PF01609 Transposase DDE domain CDL62_RS06685 PF01297 Zinc-uptake complex component A periplasmic CDL62_RS06690 PF00005 ABC transporter CDL62_RS06695 PF00950 ABC 3 transport family CDL62_RS06700 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CDL62_RS06705 PF00156 Phosphoribosyl transferase domain CDL62_RS06710 PF02146 Sir2 family CDL62_RS06715 PF02142 MGS-like domain CDL62_RS06715 PF01808 AICARFT/IMPCHase bienzyme CDL62_RS06735 PF03717 Penicillin-binding Protein dimerisation domain CDL62_RS06735 PF00905 Penicillin binding protein transpeptidase domain CDL62_RS06740 PF01098 Cell cycle protein CDL62_RS06755 PF00005 ABC transporter CDL62_RS06755 PF01061 ABC-2 type transporter CDL62_RS06755 PF00498 FHA domain CDL62_RS06760 PF03786 D-mannonate dehydratase (UxuA) CDL62_RS06765 PF00106 short chain dehydrogenase CDL62_RS06770 PF07883 Cupin domain CDL62_RS06770 PF12833 Helix-turn-helix domain CDL62_RS06775 PF02574 Homocysteine S-methyltransferase CDL62_RS06775 PF00809 Pterin binding enzyme CDL62_RS06775 PF02965 Vitamin B12 dependent methionine synthase, activation domain CDL62_RS06775 PF02607 B12 binding domain CDL62_RS06775 PF02310 B12 binding domain CDL62_RS06795 PF00171 Aldehyde dehydrogenase family CDL62_RS06820 PF01409 tRNA synthetases class II core domain (F) CDL62_RS06820 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CDL62_RS06825 PF01734 Patatin-like phospholipase CDL62_RS06835 PF17863 AAA lid domain CDL62_RS06835 PF07726 ATPase family associated with various cellular activities (AAA) CDL62_RS06870 PF01464 Transglycosylase SLT domain CDL62_RS06880 PF17762 HTH domain found in ParB protein CDL62_RS06880 PF02195 ParB-like nuclease domain CDL62_RS06885 PF13614 AAA domain CDL62_RS06895 PF01370 NAD dependent epimerase/dehydratase family CDL62_RS06900 PF00106 short chain dehydrogenase CDL62_RS06905 PF02690 Na+/Pi-cotransporter CDL62_RS06910 PF00719 Inorganic pyrophosphatase CDL62_RS06915 PF13335 Magnesium chelatase, subunit ChlI C-terminal CDL62_RS06915 PF01078 Magnesium chelatase, subunit ChlI CDL62_RS06930 PF17768 RecJ OB domain CDL62_RS06930 PF02272 DHHA1 domain CDL62_RS06930 PF01368 DHH family CDL62_RS06930 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CDL62_RS06935 PF03099 Biotin/lipoate A/B protein ligase family CDL62_RS06940 PF04055 Radical SAM superfamily CDL62_RS06945 PF13229 Right handed beta helix region CDL62_RS06950 PF01336 OB-fold nucleic acid binding domain CDL62_RS06950 PF00152 tRNA synthetases class II (D, K and N) CDL62_RS06950 PF14229 Domain of unknown function (DUF4332) CDL62_RS06955 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CDL62_RS06955 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CDL62_RS06960 PF00342 Phosphoglucose isomerase CDL62_RS06965 PF00186 Dihydrofolate reductase CDL62_RS06970 PF00303 Thymidylate synthase CDL62_RS06990 PF08676 MutL C terminal dimerisation domain CDL62_RS06990 PF01119 DNA mismatch repair protein, C-terminal domain CDL62_RS07005 PF00593 TonB dependent receptor CDL62_RS07005 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS07015 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS07015 PF00593 TonB dependent receptor CDL62_RS07030 PF00722 Glycosyl hydrolases family 16 CDL62_RS07035 PF00924 Mechanosensitive ion channel CDL62_RS07040 PF10415 Fumarase C C-terminus CDL62_RS07040 PF00206 Lyase CDL62_RS07055 PF01969 Protein of unknown function DUF111 CDL62_RS07060 PF00731 AIR carboxylase CDL62_RS07070 PF00501 AMP-binding enzyme CDL62_RS07080 PF02875 Mur ligase family, glutamate ligase domain CDL62_RS07080 PF01225 Mur ligase family, catalytic domain CDL62_RS07080 PF08245 Mur ligase middle domain CDL62_RS07090 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CDL62_RS07090 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CDL62_RS07095 PF01243 Pyridoxamine 5'-phosphate oxidase CDL62_RS07095 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CDL62_RS07100 PF00005 ABC transporter CDL62_RS07105 PF04551 GcpE protein CDL62_RS07115 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS07115 PF00989 PAS fold CDL62_RS07115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS07115 PF16736 Single Cache-like CDL62_RS07120 PF00072 Response regulator receiver domain CDL62_RS07120 PF00486 Transcriptional regulatory protein, C terminal CDL62_RS07125 PF01895 PhoU domain CDL62_RS07130 PF00005 ABC transporter CDL62_RS07135 PF00528 Binding-protein-dependent transport system inner membrane component CDL62_RS07140 PF00528 Binding-protein-dependent transport system inner membrane component CDL62_RS07145 PF12849 PBP superfamily domain CDL62_RS07150 PF12849 PBP superfamily domain CDL62_RS07185 PF13419 Haloacid dehalogenase-like hydrolase CDL62_RS07200 PF00535 Glycosyl transferase family 2 CDL62_RS07215 PF02779 Transketolase, pyrimidine binding domain CDL62_RS07215 PF00456 Transketolase, thiamine diphosphate binding domain CDL62_RS07215 PF02780 Transketolase, C-terminal domain CDL62_RS07220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDL62_RS07220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDL62_RS07230 PF00309 Sigma-54 factor, Activator interacting domain (AID) CDL62_RS07230 PF04963 Sigma-54 factor, core binding domain CDL62_RS07230 PF04552 Sigma-54, DNA binding domain CDL62_RS07235 PF04851 Type III restriction enzyme, res subunit CDL62_RS07235 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CDL62_RS07235 PF17764 3′ DNA-binding domain (3′BD) CDL62_RS07235 PF00271 Helicase conserved C-terminal domain CDL62_RS07235 PF18074 Primosomal protein N C-terminal domain CDL62_RS07240 PF03600 Citrate transporter CDL62_RS07240 PF02080 TrkA-C domain CDL62_RS07250 PF00571 CBS domain CDL62_RS07250 PF03448 MgtE intracellular N domain CDL62_RS07250 PF01769 Divalent cation transporter CDL62_RS07255 PF00398 Ribosomal RNA adenine dimethylase CDL62_RS07270 PF02577 Bifunctional nuclease CDL62_RS07275 PF01773 Na+ dependent nucleoside transporter N-terminus CDL62_RS07275 PF07662 Na+ dependent nucleoside transporter C-terminus CDL62_RS07275 PF07670 Nucleoside recognition CDL62_RS07280 PF00085 Thioredoxin CDL62_RS07285 PF02811 PHP domain CDL62_RS07285 PF01336 OB-fold nucleic acid binding domain CDL62_RS07285 PF14579 Helix-hairpin-helix motif CDL62_RS07285 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDL62_RS07285 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDL62_RS07290 PF02156 Glycosyl hydrolase family 26 CDL62_RS07295 PF04041 beta-1,4-mannooligosaccharide phosphorylase CDL62_RS07315 PF04015 Domain of unknown function (DUF362) CDL62_RS07325 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDL62_RS07325 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CDL62_RS07330 PF00149 Calcineurin-like phosphoesterase CDL62_RS07355 PF00180 Isocitrate/isopropylmalate dehydrogenase CDL62_RS07360 PF00682 HMGL-like CDL62_RS07360 PF08502 LeuA allosteric (dimerisation) domain CDL62_RS07365 PF00694 Aconitase C-terminal domain CDL62_RS07370 PF00330 Aconitase family (aconitate hydratase) CDL62_RS07375 PF08502 LeuA allosteric (dimerisation) domain CDL62_RS07375 PF00682 HMGL-like CDL62_RS07380 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CDL62_RS07380 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CDL62_RS07390 PF00205 Thiamine pyrophosphate enzyme, central domain CDL62_RS07390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CDL62_RS07390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDL62_RS07395 PF00920 Dehydratase family CDL62_RS07410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDL62_RS07410 PF00672 HAMP domain CDL62_RS07410 PF02203 Tar ligand binding domain homologue CDL62_RS07435 PF00005 ABC transporter CDL62_RS07445 PF14602 Hexapeptide repeat of succinyl-transferase CDL62_RS07445 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CDL62_RS07445 PF00132 Bacterial transferase hexapeptide (six repeats) CDL62_RS07450 PF01300 Telomere recombination CDL62_RS07460 PF01782 RimM N-terminal domain CDL62_RS07460 PF05239 PRC-barrel domain CDL62_RS07465 PF00886 Ribosomal protein S16 CDL62_RS07470 PF12833 Helix-turn-helix domain CDL62_RS07470 PF07883 Cupin domain CDL62_RS07480 PF07670 Nucleoside recognition CDL62_RS07500 PF01807 CHC2 zinc finger CDL62_RS07500 PF10410 DnaB-helicase binding domain of primase CDL62_RS07500 PF08275 DNA primase catalytic core, N-terminal domain CDL62_RS07505 PF00873 AcrB/AcrD/AcrF family CDL62_RS07510 PF00529 HlyD membrane-fusion protein of T1SS CDL62_RS07510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDL62_RS07540 PF04542 Sigma-70 region 2 CDL62_RS07540 PF08281 Sigma-70, region 4 CDL62_RS07550 PF01053 Cys/Met metabolism PLP-dependent enzyme CDL62_RS07555 PF00231 ATP synthase CDL62_RS07560 PF00306 ATP synthase alpha/beta chain, C terminal domain CDL62_RS07560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDL62_RS07560 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDL62_RS07565 PF00213 ATP synthase delta (OSCP) subunit CDL62_RS07570 PF00430 ATP synthase B/B' CF(0) CDL62_RS07575 PF00137 ATP synthase subunit C CDL62_RS07580 PF00119 ATP synthase A chain CDL62_RS07595 PF00211 Adenylate and Guanylate cyclase catalytic domain CDL62_RS07600 PF00582 Universal stress protein family CDL62_RS07605 PF01725 Ham1 family CDL62_RS07620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDL62_RS07620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDL62_RS07635 PF01136 Peptidase family U32 CDL62_RS07645 PF17101 Stealth protein CR1, conserved region 1 CDL62_RS07645 PF11380 Stealth protein CR2, conserved region 2 CDL62_RS07655 PF17102 Stealth protein CR3, conserved region 3 CDL62_RS07655 PF17101 Stealth protein CR1, conserved region 1 CDL62_RS07655 PF11380 Stealth protein CR2, conserved region 2 CDL62_RS07665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDL62_RS07665 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDL62_RS07670 PF00348 Polyprenyl synthetase CDL62_RS07690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDL62_RS07690 PF02203 Tar ligand binding domain homologue CDL62_RS07690 PF00672 HAMP domain CDL62_RS07700 PF00072 Response regulator receiver domain CDL62_RS07710 PF02895 Signal transducing histidine kinase, homodimeric domain CDL62_RS07710 PF07194 P2 response regulator binding domain CDL62_RS07710 PF01627 Hpt domain CDL62_RS07710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS07710 PF01584 CheW-like domain CDL62_RS07715 PF01584 CheW-like domain CDL62_RS07725 PF01739 CheR methyltransferase, SAM binding domain CDL62_RS07725 PF03705 CheR methyltransferase, all-alpha domain CDL62_RS07730 PF01627 Hpt domain CDL62_RS07730 PF00672 HAMP domain CDL62_RS07730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS07730 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS07730 PF00072 Response regulator receiver domain CDL62_RS07730 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS07735 PF03975 CheD chemotactic sensory transduction CDL62_RS07740 PF00072 Response regulator receiver domain CDL62_RS07740 PF01339 CheB methylesterase CDL62_RS07745 PF13426 PAS domain CDL62_RS07745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDL62_RS07745 PF08447 PAS fold CDL62_RS07750 PF01739 CheR methyltransferase, SAM binding domain CDL62_RS07750 PF03705 CheR methyltransferase, all-alpha domain CDL62_RS07755 PF03705 CheR methyltransferase, all-alpha domain CDL62_RS07755 PF01739 CheR methyltransferase, SAM binding domain CDL62_RS07760 PF01339 CheB methylesterase CDL62_RS07785 PF01061 ABC-2 type transporter CDL62_RS07785 PF00005 ABC transporter CDL62_RS07785 PF00498 FHA domain CDL62_RS07800 PF16916 Dimerisation domain of Zinc Transporter CDL62_RS07800 PF01545 Cation efflux family CDL62_RS07810 PF06969 HemN C-terminal domain CDL62_RS07810 PF04055 Radical SAM superfamily CDL62_RS07820 PF02082 Transcriptional regulator CDL62_RS07825 PF13183 4Fe-4S dicluster domain CDL62_RS07825 PF11870 Domain of unknown function (DUF3390) CDL62_RS07825 PF02589 LUD domain CDL62_RS07830 PF02502 Ribose/Galactose Isomerase CDL62_RS07835 PF02445 Quinolinate synthetase A protein CDL62_RS07840 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDL62_RS07840 PF01627 Hpt domain CDL62_RS07840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS07840 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS07840 PF00072 Response regulator receiver domain CDL62_RS07845 PF17864 RuvB AAA lid domain CDL62_RS07845 PF05491 RuvB C-terminal winged helix domain CDL62_RS07845 PF05496 Holliday junction DNA helicase RuvB P-loop domain CDL62_RS07855 PF00692 dUTPase CDL62_RS07880 PF02130 Uncharacterized protein family UPF0054 CDL62_RS07885 PF13932 GidA associated domain CDL62_RS07885 PF01134 Glucose inhibited division protein A CDL62_RS07890 PF13382 Adenine deaminase C-terminal domain CDL62_RS07890 PF01979 Amidohydrolase family CDL62_RS07895 PF01541 GIY-YIG catalytic domain CDL62_RS07895 PF08459 UvrC Helix-hairpin-helix N-terminal CDL62_RS07900 PF10437 Bacterial lipoate protein ligase C-terminus CDL62_RS07900 PF03099 Biotin/lipoate A/B protein ligase family CDL62_RS07905 PF02580 D-Tyr-tRNA(Tyr) deacylase CDL62_RS07910 PF03819 MazG nucleotide pyrophosphohydrolase domain CDL62_RS07915 PF01791 DeoC/LacD family aldolase CDL62_RS07925 PF00348 Polyprenyl synthetase CDL62_RS07930 PF01022 Bacterial regulatory protein, arsR family CDL62_RS07935 PF01242 6-pyruvoyl tetrahydropterin synthase CDL62_RS07945 PF13460 NAD(P)H-binding CDL62_RS07945 PF11066 Protein of unknown function (DUF2867) CDL62_RS07950 PF04151 Bacterial pre-peptidase C-terminal domain CDL62_RS07950 PF04389 Peptidase family M28 CDL62_RS07960 PF01367 5'-3' exonuclease, C-terminal SAM fold CDL62_RS07960 PF01612 3'-5' exonuclease CDL62_RS07960 PF00476 DNA polymerase family A CDL62_RS07960 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CDL62_RS07990 PF01145 SPFH domain / Band 7 family CDL62_RS07990 PF15975 Flotillin CDL62_RS08005 PF05816 Toxic anion resistance protein (TelA) CDL62_RS08015 PF13180 PDZ domain CDL62_RS08015 PF03572 Peptidase family S41 CDL62_RS08020 PF02080 TrkA-C domain CDL62_RS08020 PF06826 Predicted Permease Membrane Region CDL62_RS08025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDL62_RS08030 PF03572 Peptidase family S41 CDL62_RS08030 PF13180 PDZ domain CDL62_RS08040 PF01507 Phosphoadenosine phosphosulfate reductase family CDL62_RS08045 PF00365 Phosphofructokinase CDL62_RS08055 PF02547 Queuosine biosynthesis protein CDL62_RS08060 PF16198 tRNA pseudouridylate synthase B C-terminal domain CDL62_RS08060 PF01509 TruB family pseudouridylate synthase (N terminal domain) CDL62_RS08065 PF02673 Bacitracin resistance protein BacA CDL62_RS08075 PF18075 FtsX extracellular domain CDL62_RS08105 PF01627 Hpt domain CDL62_RS08105 PF00072 Response regulator receiver domain CDL62_RS08105 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS08105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS08105 PF00672 HAMP domain CDL62_RS08105 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS08115 PF13439 Glycosyltransferase Family 4 CDL62_RS08115 PF00534 Glycosyl transferases group 1 CDL62_RS08120 PF00535 Glycosyl transferase family 2 CDL62_RS08165 PF01712 Deoxynucleoside kinase CDL62_RS08180 PF03641 Possible lysine decarboxylase CDL62_RS08195 PF00825 Ribonuclease P CDL62_RS08200 PF01809 Putative membrane protein insertion efficiency factor CDL62_RS08215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS08215 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS08215 PF09456 RcsC Alpha-Beta-Loop (ABL) CDL62_RS08215 PF00072 Response regulator receiver domain CDL62_RS08225 PF01063 Amino-transferase class IV CDL62_RS08230 PF00072 Response regulator receiver domain CDL62_RS08230 PF00989 PAS fold CDL62_RS08230 PF01627 Hpt domain CDL62_RS08230 PF18415 Histidine kinase receptor ArcB trans-membrane domain CDL62_RS08230 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS08230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS08250 PF03144 Elongation factor Tu domain 2 CDL62_RS08250 PF00009 Elongation factor Tu GTP binding domain CDL62_RS08250 PF00679 Elongation factor G C-terminus CDL62_RS08255 PF00708 Acylphosphatase CDL62_RS08265 PF00155 Aminotransferase class I and II CDL62_RS08275 PF03806 AbgT putative transporter family CDL62_RS08300 PF00849 RNA pseudouridylate synthase CDL62_RS08305 PF13286 Phosphohydrolase-associated domain CDL62_RS08305 PF01966 HD domain CDL62_RS08310 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CDL62_RS08315 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH CDL62_RS08325 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CDL62_RS08330 PF00581 Rhodanese-like domain CDL62_RS08355 PF03073 TspO/MBR family CDL62_RS08385 PF00698 Acyl transferase domain CDL62_RS08385 PF08240 Alcohol dehydrogenase GroES-like domain CDL62_RS08385 PF16197 Ketoacyl-synthetase C-terminal extension CDL62_RS08385 PF00109 Beta-ketoacyl synthase, N-terminal domain CDL62_RS08385 PF02801 Beta-ketoacyl synthase, C-terminal domain CDL62_RS08385 PF08659 KR domain CDL62_RS08385 PF00550 Phosphopantetheine attachment site CDL62_RS08385 PF14765 Polyketide synthase dehydratase CDL62_RS08410 PF08241 Methyltransferase domain CDL62_RS08425 PF01230 HIT domain CDL62_RS08465 PF00672 HAMP domain CDL62_RS08465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDL62_RS08465 PF17202 Single cache domain 3 CDL62_RS08470 PF00155 Aminotransferase class I and II CDL62_RS08495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS08495 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDL62_RS08495 PF00072 Response regulator receiver domain CDL62_RS08495 PF01627 Hpt domain CDL62_RS08495 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS08505 PF09285 Elongation factor P, C-terminal CDL62_RS08505 PF08207 Elongation factor P (EF-P) KOW-like domain CDL62_RS08505 PF01132 Elongation factor P (EF-P) OB domain CDL62_RS08520 PF00579 tRNA synthetases class I (W and Y) CDL62_RS08525 PF01765 Ribosome recycling factor CDL62_RS08530 PF03692 Putative zinc- or iron-chelating domain CDL62_RS08535 PF02540 NAD synthase CDL62_RS08540 PF17746 SfsA N-terminal OB domain CDL62_RS08540 PF03749 Sugar fermentation stimulation protein RE domain CDL62_RS08550 PF00814 Glycoprotease family CDL62_RS08560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDL62_RS08565 PF00005 ABC transporter CDL62_RS08565 PF02687 FtsX-like permease family CDL62_RS08565 PF12704 MacB-like periplasmic core domain CDL62_RS08570 PF12704 MacB-like periplasmic core domain CDL62_RS08570 PF00005 ABC transporter CDL62_RS08570 PF02687 FtsX-like permease family CDL62_RS08575 PF00005 ABC transporter CDL62_RS08580 PF00544 Pectate lyase CDL62_RS08585 PF01228 Glycine radical CDL62_RS08585 PF02901 Pyruvate formate lyase-like CDL62_RS08590 PF04055 Radical SAM superfamily CDL62_RS08595 PF01226 Formate/nitrite transporter CDL62_RS08600 PF05193 Peptidase M16 inactive domain CDL62_RS08605 PF00675 Insulinase (Peptidase family M16) CDL62_RS08605 PF05193 Peptidase M16 inactive domain CDL62_RS08640 PF00795 Carbon-nitrogen hydrolase CDL62_RS08645 PF00294 pfkB family carbohydrate kinase CDL62_RS08655 PF01590 GAF domain CDL62_RS08655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS08655 PF00360 Phytochrome region CDL62_RS08655 PF08446 PAS fold CDL62_RS08655 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS08660 PF01209 ubiE/COQ5 methyltransferase family CDL62_RS08665 PF00665 Integrase core domain CDL62_RS08665 PF08281 Sigma-70, region 4 CDL62_RS08670 PF01695 IstB-like ATP binding protein CDL62_RS08675 PF00438 S-adenosylmethionine synthetase, N-terminal domain CDL62_RS08675 PF02772 S-adenosylmethionine synthetase, central domain CDL62_RS08675 PF02773 S-adenosylmethionine synthetase, C-terminal domain CDL62_RS08685 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CDL62_RS08690 PF00132 Bacterial transferase hexapeptide (six repeats) CDL62_RS08695 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDL62_RS08695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDL62_RS08710 PF00593 TonB dependent receptor CDL62_RS08710 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS08740 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS08740 PF00072 Response regulator receiver domain CDL62_RS08740 PF01627 Hpt domain CDL62_RS08740 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS08740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS08740 PF00672 HAMP domain CDL62_RS08750 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CDL62_RS08750 PF02843 Phosphoribosylglycinamide synthetase, C domain CDL62_RS08750 PF02844 Phosphoribosylglycinamide synthetase, N domain CDL62_RS08755 PF01522 Polysaccharide deacetylase CDL62_RS08775 PF09382 RQC domain CDL62_RS08775 PF16124 RecQ zinc-binding CDL62_RS08775 PF00570 HRDC domain CDL62_RS08775 PF00271 Helicase conserved C-terminal domain CDL62_RS08775 PF00270 DEAD/DEAH box helicase CDL62_RS08790 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CDL62_RS08790 PF02222 ATP-grasp domain CDL62_RS08795 PF00731 AIR carboxylase CDL62_RS08805 PF01451 Low molecular weight phosphotyrosine protein phosphatase CDL62_RS08810 PF01758 Sodium Bile acid symporter family CDL62_RS08820 PF09719 Putative redox-active protein (C_GCAxxG_C_C) CDL62_RS08870 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS08870 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDL62_RS08870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS08880 PF00939 Sodium:sulfate symporter transmembrane region CDL62_RS08890 PF04371 Porphyromonas-type peptidyl-arginine deiminase CDL62_RS08905 PF05140 ResB-like family CDL62_RS08905 PF01578 Cytochrome C assembly protein CDL62_RS08910 PF04542 Sigma-70 region 2 CDL62_RS08910 PF08281 Sigma-70, region 4 CDL62_RS08955 PF03544 Gram-negative bacterial TonB protein C-terminal CDL62_RS08965 PF16360 GTP-binding GTPase Middle Region CDL62_RS08965 PF01926 50S ribosome-binding GTPase CDL62_RS08965 PF13167 GTP-binding GTPase N-terminal CDL62_RS08970 PF01268 Formate--tetrahydrofolate ligase CDL62_RS08980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDL62_RS08980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDL62_RS08980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDL62_RS08985 PF00890 FAD binding domain CDL62_RS08985 PF02910 Fumarate reductase flavoprotein C-term CDL62_RS08995 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDL62_RS09000 PF02245 Methylpurine-DNA glycosylase (MPG) CDL62_RS09015 PF00578 AhpC/TSA family CDL62_RS09035 PF00696 Amino acid kinase family CDL62_RS09040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS09040 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS09040 PF00072 Response regulator receiver domain CDL62_RS09040 PF09308 LuxQ, periplasmic CDL62_RS09075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDL62_RS09075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDL62_RS09085 PF00889 Elongation factor TS CDL62_RS09090 PF00318 Ribosomal protein S2 CDL62_RS09095 PF00380 Ribosomal protein S9/S16 CDL62_RS09100 PF00572 Ribosomal protein L13 CDL62_RS09115 PF01627 Hpt domain CDL62_RS09115 PF00072 Response regulator receiver domain CDL62_RS09115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS09115 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS09115 PF00672 HAMP domain CDL62_RS09125 PF13085 2Fe-2S iron-sulfur cluster binding domain CDL62_RS09130 PF02910 Fumarate reductase flavoprotein C-term CDL62_RS09130 PF00890 FAD binding domain CDL62_RS09145 PF00579 tRNA synthetases class I (W and Y) CDL62_RS09150 PF01339 CheB methylesterase CDL62_RS09150 PF00072 Response regulator receiver domain CDL62_RS09160 PF01207 Dihydrouridine synthase (Dus) CDL62_RS09165 PF02687 FtsX-like permease family CDL62_RS09165 PF12704 MacB-like periplasmic core domain CDL62_RS09175 PF02033 Ribosome-binding factor A CDL62_RS09185 PF03551 Transcriptional regulator PadR-like family CDL62_RS09210 PF00005 ABC transporter CDL62_RS09225 PF00005 ABC transporter CDL62_RS09225 PF03412 Peptidase C39 family CDL62_RS09225 PF00664 ABC transporter transmembrane region CDL62_RS09260 PF04235 Protein of unknown function (DUF418) CDL62_RS09265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDL62_RS09265 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CDL62_RS09270 PF07690 Major Facilitator Superfamily CDL62_RS09285 PF00486 Transcriptional regulatory protein, C terminal CDL62_RS09285 PF00072 Response regulator receiver domain CDL62_RS09290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS09290 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS09310 PF01649 Ribosomal protein S20 CDL62_RS09320 PF04002 RadC-like JAB domain CDL62_RS09340 PF01343 Peptidase family S49 CDL62_RS09345 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CDL62_RS09350 PF01048 Phosphorylase superfamily CDL62_RS09355 PF00672 HAMP domain CDL62_RS09355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDL62_RS09355 PF02203 Tar ligand binding domain homologue CDL62_RS09365 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDL62_RS09365 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDL62_RS09375 PF00722 Glycosyl hydrolases family 16 CDL62_RS09380 PF17092 Penicillin-binding protein OB-like domain CDL62_RS09380 PF00912 Transglycosylase CDL62_RS09380 PF00905 Penicillin binding protein transpeptidase domain CDL62_RS09385 PF01370 NAD dependent epimerase/dehydratase family CDL62_RS09390 PF00677 Lumazine binding domain CDL62_RS09400 PF02469 Fasciclin domain CDL62_RS09405 PF00188 Cysteine-rich secretory protein family CDL62_RS09405 PF14504 CAP-associated N-terminal CDL62_RS09420 PF03129 Anticodon binding domain CDL62_RS09425 PF03471 Transporter associated domain CDL62_RS09425 PF00999 Sodium/hydrogen exchanger family CDL62_RS09425 PF02080 TrkA-C domain CDL62_RS09435 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CDL62_RS09435 PF02779 Transketolase, pyrimidine binding domain CDL62_RS09435 PF02780 Transketolase, C-terminal domain CDL62_RS09440 PF00672 HAMP domain CDL62_RS09440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS09440 PF00072 Response regulator receiver domain CDL62_RS09440 PF01627 Hpt domain CDL62_RS09440 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS09440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS09445 PF00905 Penicillin binding protein transpeptidase domain CDL62_RS09445 PF00912 Transglycosylase CDL62_RS09450 PF18073 Rubredoxin metal binding domain CDL62_RS09455 PF02261 Aspartate decarboxylase CDL62_RS09460 PF02569 Pantoate-beta-alanine ligase CDL62_RS09465 PF00534 Glycosyl transferases group 1 CDL62_RS09465 PF08323 Starch synthase catalytic domain CDL62_RS09475 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CDL62_RS09485 PF03781 Sulfatase-modifying factor enzyme 1 CDL62_RS09490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDL62_RS09490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDL62_RS09495 PF10518 TAT (twin-arginine translocation) pathway signal sequence CDL62_RS09495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDL62_RS09510 PF00535 Glycosyl transferase family 2 CDL62_RS09530 PF07883 Cupin domain CDL62_RS09535 PF11490 DNA polymerase III polC-type N-terminus II CDL62_RS09535 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDL62_RS09535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDL62_RS09535 PF14579 Helix-hairpin-helix motif CDL62_RS09535 PF02811 PHP domain CDL62_RS09535 PF00929 Exonuclease CDL62_RS09550 PF00657 GDSL-like Lipase/Acylhydrolase CDL62_RS09555 PF07690 Major Facilitator Superfamily CDL62_RS09560 PF00296 Luciferase-like monooxygenase CDL62_RS09570 PF00459 Inositol monophosphatase family CDL62_RS09600 PF02142 MGS-like domain CDL62_RS09600 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDL62_RS09600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDL62_RS09615 PF00691 OmpA family CDL62_RS09615 PF13677 Membrane MotB of proton-channel complex MotA/MotB CDL62_RS09655 PF00884 Sulfatase CDL62_RS09660 PF00884 Sulfatase CDL62_RS09665 PF04055 Radical SAM superfamily CDL62_RS09665 PF13186 Iron-sulfur cluster-binding domain CDL62_RS09680 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDL62_RS09680 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CDL62_RS09685 PF01783 Ribosomal L32p protein family CDL62_RS09695 PF07495 Y_Y_Y domain CDL62_RS09695 PF00072 Response regulator receiver domain CDL62_RS09695 PF07494 Two component regulator propeller CDL62_RS09695 PF12833 Helix-turn-helix domain CDL62_RS09695 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS09695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS09700 PF00672 HAMP domain CDL62_RS09700 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS09700 PF01627 Hpt domain CDL62_RS09700 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS09700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS09700 PF00072 Response regulator receiver domain CDL62_RS09705 PF16745 RsgA N-terminal domain CDL62_RS09705 PF03193 RsgA GTPase CDL62_RS09710 PF13368 Topoisomerase C-terminal repeat CDL62_RS09710 PF01751 Toprim domain CDL62_RS09710 PF01131 DNA topoisomerase CDL62_RS09725 PF03781 Sulfatase-modifying factor enzyme 1 CDL62_RS09745 PF00483 Nucleotidyl transferase CDL62_RS09745 PF01050 Mannose-6-phosphate isomerase CDL62_RS09750 PF02405 Permease MlaE CDL62_RS09755 PF00005 ABC transporter CDL62_RS09785 PF02867 Ribonucleotide reductase, barrel domain CDL62_RS09785 PF00317 Ribonucleotide reductase, all-alpha domain CDL62_RS09785 PF03477 ATP cone domain CDL62_RS09795 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDL62_RS09815 PF02706 Chain length determinant protein CDL62_RS09825 PF02350 UDP-N-acetylglucosamine 2-epimerase CDL62_RS09835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDL62_RS09835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDL62_RS09835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDL62_RS09845 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CDL62_RS09845 PF01565 FAD binding domain CDL62_RS09865 PF03808 Glycosyl transferase WecB/TagA/CpsF family CDL62_RS09890 PF13439 Glycosyltransferase Family 4 CDL62_RS09895 PF00156 Phosphoribosyl transferase domain CDL62_RS09910 PF02350 UDP-N-acetylglucosamine 2-epimerase CDL62_RS09945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS09945 PF07694 5TMR of 5TMR-LYT CDL62_RS09945 PF06580 Histidine kinase CDL62_RS09950 PF04397 LytTr DNA-binding domain CDL62_RS09950 PF00072 Response regulator receiver domain CDL62_RS09960 PF01926 50S ribosome-binding GTPase CDL62_RS09960 PF01018 GTP1/OBG CDL62_RS09960 PF04055 Radical SAM superfamily CDL62_RS10000 PF01915 Glycosyl hydrolase family 3 C-terminal domain CDL62_RS10000 PF00933 Glycosyl hydrolase family 3 N terminal domain CDL62_RS10000 PF14310 Fibronectin type III-like domain CDL62_RS10005 PF14310 Fibronectin type III-like domain CDL62_RS10005 PF01915 Glycosyl hydrolase family 3 C-terminal domain CDL62_RS10005 PF00933 Glycosyl hydrolase family 3 N terminal domain CDL62_RS10015 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CDL62_RS10020 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CDL62_RS10020 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDL62_RS10030 PF13492 GAF domain CDL62_RS10030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS10030 PF07694 5TMR of 5TMR-LYT CDL62_RS10030 PF06580 Histidine kinase CDL62_RS10040 PF10459 Peptidase S46 CDL62_RS10050 PF01351 Ribonuclease HII CDL62_RS10060 PF09190 DALR domain CDL62_RS10060 PF01406 tRNA synthetases class I (C) catalytic domain CDL62_RS10075 PF00072 Response regulator receiver domain CDL62_RS10075 PF01627 Hpt domain CDL62_RS10075 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS10075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS10075 PF00672 HAMP domain CDL62_RS10075 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS10080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS10080 PF00672 HAMP domain CDL62_RS10080 PF00072 Response regulator receiver domain CDL62_RS10080 PF01627 Hpt domain CDL62_RS10080 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS10080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS10095 PF17876 Cold shock domain CDL62_RS10095 PF00773 RNB domain CDL62_RS10095 PF00575 S1 RNA binding domain CDL62_RS10095 PF08206 Ribonuclease B OB domain CDL62_RS10100 PF00440 Bacterial regulatory proteins, tetR family CDL62_RS10105 PF04204 Homoserine O-succinyltransferase CDL62_RS10110 PF01693 Caulimovirus viroplasmin CDL62_RS10125 PF02397 Bacterial sugar transferase CDL62_RS10140 PF00459 Inositol monophosphatase family CDL62_RS10145 PF00162 Phosphoglycerate kinase CDL62_RS10150 PF02152 Dihydroneopterin aldolase CDL62_RS10155 PF09115 DNA polymerase III, delta subunit, C terminal CDL62_RS10160 PF04468 PSP1 C-terminal conserved region CDL62_RS10170 PF02390 Putative methyltransferase CDL62_RS10175 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CDL62_RS10175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CDL62_RS10180 PF10609 NUBPL iron-transfer P-loop NTPase CDL62_RS10180 PF01883 Iron-sulfur cluster assembly protein CDL62_RS10185 PF01521 Iron-sulphur cluster biosynthesis CDL62_RS10185 PF01106 NifU-like domain CDL62_RS10190 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CDL62_RS10190 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CDL62_RS10195 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CDL62_RS10200 PF00158 Sigma-54 interaction domain CDL62_RS10200 PF00072 Response regulator receiver domain CDL62_RS10200 PF02954 Bacterial regulatory protein, Fis family CDL62_RS10215 PF02954 Bacterial regulatory protein, Fis family CDL62_RS10215 PF00158 Sigma-54 interaction domain CDL62_RS10215 PF00072 Response regulator receiver domain CDL62_RS10220 PF01597 Glycine cleavage H-protein CDL62_RS10225 PF02348 Cytidylyltransferase CDL62_RS10230 PF02806 Alpha amylase, C-terminal all-beta domain CDL62_RS10230 PF00128 Alpha amylase, catalytic domain CDL62_RS10230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CDL62_RS10235 PF11897 Protein of unknown function (DUF3417) CDL62_RS10235 PF00343 Carbohydrate phosphorylase CDL62_RS10245 PF13439 Glycosyltransferase Family 4 CDL62_RS10245 PF00534 Glycosyl transferases group 1 CDL62_RS10265 PF08331 Domain of unknown function (DUF1730) CDL62_RS10270 PF01883 Iron-sulfur cluster assembly protein CDL62_RS10275 PF02657 Fe-S metabolism associated domain CDL62_RS10280 PF00266 Aminotransferase class-V CDL62_RS10285 PF01458 Uncharacterized protein family (UPF0051) CDL62_RS10290 PF00005 ABC transporter CDL62_RS10295 PF01458 Uncharacterized protein family (UPF0051) CDL62_RS10300 PF00520 Ion transport protein CDL62_RS10300 PF00027 Cyclic nucleotide-binding domain CDL62_RS10310 PF09154 Domain of unknown function (DUF1939) CDL62_RS10310 PF00128 Alpha amylase, catalytic domain CDL62_RS10320 PF01966 HD domain CDL62_RS10325 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CDL62_RS10325 PF00132 Bacterial transferase hexapeptide (six repeats) CDL62_RS10330 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CDL62_RS10330 PF07977 FabA-like domain CDL62_RS10335 PF00132 Bacterial transferase hexapeptide (six repeats) CDL62_RS10335 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CDL62_RS10340 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CDL62_RS10345 PF02789 Cytosol aminopeptidase family, N-terminal domain CDL62_RS10345 PF00883 Cytosol aminopeptidase family, catalytic domain CDL62_RS10365 PF02416 mttA/Hcf106 family CDL62_RS10370 PF02163 Peptidase family M50 CDL62_RS10370 PF17820 PDZ domain CDL62_RS10375 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CDL62_RS10375 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CDL62_RS10375 PF13288 DXP reductoisomerase C-terminal domain CDL62_RS10380 PF01551 Peptidase family M23 CDL62_RS10390 PF05552 Conserved TM helix CDL62_RS10390 PF00924 Mechanosensitive ion channel CDL62_RS10395 PF09827 CRISPR associated protein Cas2 CDL62_RS10400 PF01867 CRISPR associated protein Cas1 CDL62_RS10425 PF18019 HD domain CDL62_RS10460 PF04760 Translation initiation factor IF-2, N-terminal region CDL62_RS10460 PF00009 Elongation factor Tu GTP binding domain CDL62_RS10460 PF11987 Translation-initiation factor 2 CDL62_RS10465 PF00575 S1 RNA binding domain CDL62_RS10465 PF13184 NusA-like KH domain CDL62_RS10465 PF08529 NusA N-terminal domain CDL62_RS10470 PF17384 RimP C-terminal SH3 domain CDL62_RS10470 PF02576 RimP N-terminal domain CDL62_RS10485 PF02769 AIR synthase related protein, C-terminal domain CDL62_RS10485 PF00586 AIR synthase related protein, N-terminal domain CDL62_RS10490 PF07499 RuvA, C-terminal domain CDL62_RS10490 PF01330 RuvA N terminal domain CDL62_RS10500 PF02954 Bacterial regulatory protein, Fis family CDL62_RS10500 PF06490 Flagellar regulatory protein FleQ CDL62_RS10500 PF00158 Sigma-54 interaction domain CDL62_RS10520 PF00166 Chaperonin 10 Kd subunit CDL62_RS10525 PF00118 TCP-1/cpn60 chaperonin family CDL62_RS10530 PF03144 Elongation factor Tu domain 2 CDL62_RS10530 PF06421 GTP-binding protein LepA C-terminus CDL62_RS10530 PF00009 Elongation factor Tu GTP binding domain CDL62_RS10530 PF00679 Elongation factor G C-terminus CDL62_RS10535 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CDL62_RS10535 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CDL62_RS10545 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CDL62_RS10545 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CDL62_RS10555 PF01227 GTP cyclohydrolase I CDL62_RS10565 PF00593 TonB dependent receptor CDL62_RS10565 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS10595 PF01618 MotA/TolQ/ExbB proton channel family CDL62_RS10600 PF00710 Asparaginase, N-terminal CDL62_RS10600 PF17763 Glutaminase/Asparaginase C-terminal domain CDL62_RS10605 PF01026 TatD related DNase CDL62_RS10610 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDL62_RS10610 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CDL62_RS10615 PF01554 MatE CDL62_RS10620 PF01619 Proline dehydrogenase CDL62_RS10625 PF01752 Collagenase CDL62_RS10625 PF08453 Peptidase family M9 N-terminal CDL62_RS10635 PF00011 Hsp20/alpha crystallin family CDL62_RS10640 PF00313 'Cold-shock' DNA-binding domain CDL62_RS10655 PF00005 ABC transporter CDL62_RS10660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDL62_RS10665 PF01761 3-dehydroquinate synthase CDL62_RS10680 PF02481 DNA recombination-mediator protein A CDL62_RS10680 PF17782 DprA winged helix domain CDL62_RS10685 PF13183 4Fe-4S dicluster domain CDL62_RS10685 PF02913 FAD linked oxidases, C-terminal domain CDL62_RS10685 PF01565 FAD binding domain CDL62_RS10695 PF01497 Periplasmic binding protein CDL62_RS10700 PF01032 FecCD transport family CDL62_RS10705 PF00005 ABC transporter CDL62_RS10750 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CDL62_RS10755 PF02277 Phosphoribosyltransferase CDL62_RS10760 PF02654 Cobalamin-5-phosphate synthase CDL62_RS10765 PF00300 Histidine phosphatase superfamily (branch 1) CDL62_RS10765 PF13456 Reverse transcriptase-like CDL62_RS10770 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS10770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS10770 PF02743 Cache domain CDL62_RS10780 PF00691 OmpA family CDL62_RS10780 PF05736 OprF membrane domain CDL62_RS10795 PF00989 PAS fold CDL62_RS10795 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS10795 PF01627 Hpt domain CDL62_RS10795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS10795 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDL62_RS10795 PF00072 Response regulator receiver domain CDL62_RS10800 PF07685 CobB/CobQ-like glutamine amidotransferase domain CDL62_RS10815 PF02567 Phenazine biosynthesis-like protein CDL62_RS10820 PF00155 Aminotransferase class I and II CDL62_RS10825 PF03186 CobD/Cbib protein CDL62_RS10855 PF08447 PAS fold CDL62_RS10855 PF13426 PAS domain CDL62_RS10855 PF07536 HWE histidine kinase CDL62_RS10880 PF00457 Glycosyl hydrolases family 11 CDL62_RS10885 PF13472 GDSL-like Lipase/Acylhydrolase family CDL62_RS10885 PF07859 alpha/beta hydrolase fold CDL62_RS10925 PF03129 Anticodon binding domain CDL62_RS10925 PF04073 Aminoacyl-tRNA editing domain CDL62_RS10925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDL62_RS10935 PF01263 Aldose 1-epimerase CDL62_RS10940 PF00133 tRNA synthetases class I (I, L, M and V) CDL62_RS10940 PF08264 Anticodon-binding domain of tRNA CDL62_RS10940 PF13603 Leucyl-tRNA synthetase, Domain 2 CDL62_RS10955 PF02911 Formyl transferase, C-terminal domain CDL62_RS10955 PF00551 Formyl transferase CDL62_RS10960 PF00550 Phosphopantetheine attachment site CDL62_RS10965 PF00109 Beta-ketoacyl synthase, N-terminal domain CDL62_RS10965 PF02801 Beta-ketoacyl synthase, C-terminal domain CDL62_RS10970 PF14622 Ribonuclease-III-like CDL62_RS10970 PF00035 Double-stranded RNA binding motif CDL62_RS10975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS10975 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS10980 PF00072 Response regulator receiver domain CDL62_RS10980 PF00486 Transcriptional regulatory protein, C terminal CDL62_RS10990 PF01752 Collagenase CDL62_RS10990 PF08453 Peptidase family M9 N-terminal CDL62_RS11020 PF00171 Aldehyde dehydrogenase family CDL62_RS11030 PF11973 NQRA C-terminal domain CDL62_RS11030 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CDL62_RS11035 PF03116 NQR2, RnfD, RnfE family CDL62_RS11040 PF04205 FMN-binding domain CDL62_RS11045 PF02508 Rnf-Nqr subunit, membrane protein CDL62_RS11050 PF02508 Rnf-Nqr subunit, membrane protein CDL62_RS11055 PF00970 Oxidoreductase FAD-binding domain CDL62_RS11055 PF00175 Oxidoreductase NAD-binding domain CDL62_RS11055 PF00111 2Fe-2S iron-sulfur cluster binding domain CDL62_RS11060 PF02424 ApbE family CDL62_RS11065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDL62_RS11065 PF01411 tRNA synthetases class II (A) CDL62_RS11065 PF02272 DHHA1 domain CDL62_RS11070 PF01476 LysM domain CDL62_RS11070 PF01551 Peptidase family M23 CDL62_RS11070 PF08525 Opacity-associated protein A N-terminal motif CDL62_RS11075 PF00474 Sodium:solute symporter family CDL62_RS11080 PF13662 Toprim domain CDL62_RS11080 PF02132 RecR protein CDL62_RS11115 PF01784 NIF3 (NGG1p interacting factor 3) CDL62_RS11125 PF09587 Bacterial capsule synthesis protein PGA_cap CDL62_RS11130 PF00258 Flavodoxin CDL62_RS11155 PF00488 MutS domain V CDL62_RS11155 PF01624 MutS domain I CDL62_RS11155 PF05188 MutS domain II CDL62_RS11155 PF05192 MutS domain III CDL62_RS11155 PF05190 MutS family domain IV CDL62_RS11160 PF05175 Methyltransferase small domain CDL62_RS11170 PF00005 ABC transporter CDL62_RS11175 PF01699 Sodium/calcium exchanger protein CDL62_RS11180 PF02416 mttA/Hcf106 family CDL62_RS11185 PF07549 SecD/SecF GG Motif CDL62_RS11185 PF02355 Protein export membrane protein CDL62_RS11190 PF12704 MacB-like periplasmic core domain CDL62_RS11190 PF02687 FtsX-like permease family CDL62_RS11190 PF00005 ABC transporter CDL62_RS11195 PF12704 MacB-like periplasmic core domain CDL62_RS11195 PF02687 FtsX-like permease family CDL62_RS11195 PF00005 ABC transporter CDL62_RS11200 PF00158 Sigma-54 interaction domain CDL62_RS11200 PF00072 Response regulator receiver domain CDL62_RS11200 PF02954 Bacterial regulatory protein, Fis family CDL62_RS11205 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS11205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS11210 PF02629 CoA binding domain CDL62_RS11210 PF06971 Putative DNA-binding protein N-terminus CDL62_RS11225 PF02875 Mur ligase family, glutamate ligase domain CDL62_RS11225 PF08245 Mur ligase middle domain CDL62_RS11230 PF02562 PhoH-like protein CDL62_RS11230 PF13638 PIN domain CDL62_RS11235 PF00459 Inositol monophosphatase family CDL62_RS11245 PF00535 Glycosyl transferase family 2 CDL62_RS11250 PF02875 Mur ligase family, glutamate ligase domain CDL62_RS11250 PF08245 Mur ligase middle domain CDL62_RS11250 PF01225 Mur ligase family, catalytic domain CDL62_RS11255 PF03781 Sulfatase-modifying factor enzyme 1 CDL62_RS11270 PF02542 YgbB family CDL62_RS11275 PF00085 Thioredoxin CDL62_RS11275 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDL62_RS11280 PF00313 'Cold-shock' DNA-binding domain CDL62_RS11285 PF00501 AMP-binding enzyme CDL62_RS11290 PF01596 O-methyltransferase CDL62_RS11295 PF00675 Insulinase (Peptidase family M16) CDL62_RS11295 PF05193 Peptidase M16 inactive domain CDL62_RS11310 PF01676 Metalloenzyme superfamily CDL62_RS11310 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CDL62_RS11320 PF01709 Transcriptional regulator CDL62_RS11325 PF07495 Y_Y_Y domain CDL62_RS11325 PF12833 Helix-turn-helix domain CDL62_RS11325 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS11325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS11325 PF07494 Two component regulator propeller CDL62_RS11325 PF00072 Response regulator receiver domain CDL62_RS11340 PF01546 Peptidase family M20/M25/M40 CDL62_RS11340 PF07687 Peptidase dimerisation domain CDL62_RS11345 PF00733 Asparagine synthase CDL62_RS11345 PF13537 Glutamine amidotransferase domain CDL62_RS11350 PF00310 Glutamine amidotransferases class-II CDL62_RS11350 PF04898 Glutamate synthase central domain CDL62_RS11350 PF01645 Conserved region in glutamate synthase CDL62_RS11350 PF01493 GXGXG motif CDL62_RS11355 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDL62_RS11355 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDL62_RS11360 PF18318 Glutamine synthetase C-terminal domain CDL62_RS11360 PF12437 Glutamine synthetase type III N terminal CDL62_RS11360 PF00120 Glutamine synthetase, catalytic domain CDL62_RS11365 PF13520 Amino acid permease CDL62_RS11380 PF00295 Glycosyl hydrolases family 28 CDL62_RS11390 PF00072 Response regulator receiver domain CDL62_RS11390 PF01627 Hpt domain CDL62_RS11390 PF00672 HAMP domain CDL62_RS11390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS11390 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS11390 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS11395 PF00128 Alpha amylase, catalytic domain CDL62_RS11395 PF02903 Alpha amylase, N-terminal ig-like domain CDL62_RS11395 PF16657 Maltogenic Amylase, C-terminal domain CDL62_RS11400 PF01055 Glycosyl hydrolases family 31 CDL62_RS11400 PF17137 Domain of unknown function (DUF5110) CDL62_RS11400 PF13802 Galactose mutarotase-like CDL62_RS11400 PF16338 Domain of unknown function (DUF4968) CDL62_RS11405 PF09087 Cyclomaltodextrinase, N-terminal CDL62_RS11405 PF10438 Cyclo-malto-dextrinase C-terminal domain CDL62_RS11405 PF00128 Alpha amylase, catalytic domain CDL62_RS11410 PF03632 Glycosyl hydrolase family 65 central catalytic domain CDL62_RS11410 PF03636 Glycosyl hydrolase family 65, N-terminal domain CDL62_RS11410 PF03633 Glycosyl hydrolase family 65, C-terminal domain CDL62_RS11415 PF13419 Haloacid dehalogenase-like hydrolase CDL62_RS11425 PF00356 Bacterial regulatory proteins, lacI family CDL62_RS11430 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS11430 PF00593 TonB dependent receptor CDL62_RS11445 PF00128 Alpha amylase, catalytic domain CDL62_RS11445 PF11941 Domain of unknown function (DUF3459) CDL62_RS11450 PF02397 Bacterial sugar transferase CDL62_RS11460 PF00753 Metallo-beta-lactamase superfamily CDL62_RS11465 PF02347 Glycine cleavage system P-protein CDL62_RS11475 PF01270 Glycosyl hydrolases family 8 CDL62_RS11480 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS11480 PF12833 Helix-turn-helix domain CDL62_RS11480 PF07494 Two component regulator propeller CDL62_RS11480 PF00072 Response regulator receiver domain CDL62_RS11480 PF07495 Y_Y_Y domain CDL62_RS11480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS11485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDL62_RS11485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDL62_RS11490 PF04397 LytTr DNA-binding domain CDL62_RS11490 PF00072 Response regulator receiver domain CDL62_RS11495 PF06580 Histidine kinase CDL62_RS11495 PF07694 5TMR of 5TMR-LYT CDL62_RS11515 PF09154 Domain of unknown function (DUF1939) CDL62_RS11515 PF00128 Alpha amylase, catalytic domain CDL62_RS11525 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDL62_RS11525 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDL62_RS11530 PF02256 Iron hydrogenase small subunit CDL62_RS11530 PF02906 Iron only hydrogenase large subunit, C-terminal domain CDL62_RS11530 PF00037 4Fe-4S binding domain CDL62_RS11530 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDL62_RS11580 PF13188 PAS domain CDL62_RS11580 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS11580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS11590 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDL62_RS11590 PF00037 4Fe-4S binding domain CDL62_RS11590 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDL62_RS11595 PF00037 4Fe-4S binding domain CDL62_RS11595 PF02906 Iron only hydrogenase large subunit, C-terminal domain CDL62_RS11595 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDL62_RS11595 PF02256 Iron hydrogenase small subunit CDL62_RS11620 PF01053 Cys/Met metabolism PLP-dependent enzyme CDL62_RS11650 PF16886 ATPsynthase alpha/beta subunit N-term extension CDL62_RS11650 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDL62_RS11650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDL62_RS11655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDL62_RS11655 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDL62_RS11700 PF08532 Beta-galactosidase trimerisation domain CDL62_RS11700 PF02449 Beta-galactosidase CDL62_RS11700 PF08533 Beta-galactosidase C-terminal domain CDL62_RS11705 PF00403 Heavy-metal-associated domain CDL62_RS11720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS11720 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS11720 PF09308 LuxQ, periplasmic CDL62_RS11720 PF00072 Response regulator receiver domain CDL62_RS11725 PF01329 Pterin 4 alpha carbinolamine dehydratase CDL62_RS11730 PF07683 Cobalamin synthesis protein cobW C-terminal domain CDL62_RS11730 PF02492 CobW/HypB/UreG, nucleotide-binding domain CDL62_RS11740 PF01734 Patatin-like phospholipase CDL62_RS11745 PF02311 AraC-like ligand binding domain CDL62_RS11745 PF12833 Helix-turn-helix domain CDL62_RS11750 PF01301 Glycosyl hydrolases family 35 CDL62_RS11760 PF00083 Sugar (and other) transporter CDL62_RS11765 PF13181 Tetratricopeptide repeat CDL62_RS11765 PF17128 Domain of unknown function (DUF5107) CDL62_RS11780 PF00011 Hsp20/alpha crystallin family CDL62_RS11785 PF00011 Hsp20/alpha crystallin family CDL62_RS11795 PF00041 Fibronectin type III domain CDL62_RS11795 PF00553 Cellulose binding domain CDL62_RS11795 PF02011 Glycosyl hydrolase family 48 CDL62_RS11805 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CDL62_RS11810 PF02780 Transketolase, C-terminal domain CDL62_RS11810 PF02779 Transketolase, pyrimidine binding domain CDL62_RS11815 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS11815 PF18719 ArlS sensor domain CDL62_RS11815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS11820 PF00072 Response regulator receiver domain CDL62_RS11820 PF00486 Transcriptional regulatory protein, C terminal CDL62_RS11830 PF00106 short chain dehydrogenase CDL62_RS11835 PF02769 AIR synthase related protein, C-terminal domain CDL62_RS11835 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CDL62_RS11835 PF00586 AIR synthase related protein, N-terminal domain CDL62_RS11840 PF01209 ubiE/COQ5 methyltransferase family CDL62_RS11855 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDL62_RS11855 PF00588 SpoU rRNA Methylase family CDL62_RS11865 PF01116 Fructose-bisphosphate aldolase class-II CDL62_RS11880 PF01165 Ribosomal protein S21 CDL62_RS11885 PF02899 Phage integrase, N-terminal SAM-like domain CDL62_RS11885 PF00589 Phage integrase family CDL62_RS11905 PF03143 Elongation factor Tu C-terminal domain CDL62_RS11905 PF03144 Elongation factor Tu domain 2 CDL62_RS11905 PF00009 Elongation factor Tu GTP binding domain CDL62_RS11920 PF00467 KOW motif CDL62_RS11920 PF02357 Transcription termination factor nusG CDL62_RS11925 PF03946 Ribosomal protein L11, N-terminal domain CDL62_RS11925 PF00298 Ribosomal protein L11, RNA binding domain CDL62_RS11930 PF00687 Ribosomal protein L1p/L10e family CDL62_RS11935 PF00466 Ribosomal protein L10 CDL62_RS11940 PF16320 Ribosomal protein L7/L12 dimerisation domain CDL62_RS11940 PF00542 Ribosomal protein L7/L12 C-terminal domain CDL62_RS11945 PF04563 RNA polymerase beta subunit CDL62_RS11945 PF04560 RNA polymerase Rpb2, domain 7 CDL62_RS11945 PF00562 RNA polymerase Rpb2, domain 6 CDL62_RS11945 PF04561 RNA polymerase Rpb2, domain 2 CDL62_RS11945 PF04565 RNA polymerase Rpb2, domain 3 CDL62_RS11945 PF10385 RNA polymerase beta subunit external 1 domain CDL62_RS11950 PF04997 RNA polymerase Rpb1, domain 1 CDL62_RS11950 PF00623 RNA polymerase Rpb1, domain 2 CDL62_RS11950 PF04983 RNA polymerase Rpb1, domain 3 CDL62_RS11950 PF05000 RNA polymerase Rpb1, domain 4 CDL62_RS11950 PF04998 RNA polymerase Rpb1, domain 5 CDL62_RS11965 PF00544 Pectate lyase CDL62_RS11970 PF00933 Glycosyl hydrolase family 3 N terminal domain CDL62_RS11975 PF00270 DEAD/DEAH box helicase CDL62_RS11975 PF00271 Helicase conserved C-terminal domain CDL62_RS11975 PF08482 ATP-dependent helicase C-terminal CDL62_RS11975 PF04408 Helicase associated domain (HA2) CDL62_RS11980 PF00072 Response regulator receiver domain CDL62_RS11980 PF04397 LytTr DNA-binding domain CDL62_RS11995 PF03783 Curli production assembly/transport component CsgG CDL62_RS12025 PF00072 Response regulator receiver domain CDL62_RS12025 PF04397 LytTr DNA-binding domain CDL62_RS12030 PF00072 Response regulator receiver domain CDL62_RS12030 PF04397 LytTr DNA-binding domain CDL62_RS12035 PF10518 TAT (twin-arginine translocation) pathway signal sequence CDL62_RS12035 PF00149 Calcineurin-like phosphoesterase CDL62_RS12040 PF00675 Insulinase (Peptidase family M16) CDL62_RS12040 PF05193 Peptidase M16 inactive domain CDL62_RS12050 PF00128 Alpha amylase, catalytic domain CDL62_RS12050 PF00686 Starch binding domain CDL62_RS12050 PF01833 IPT/TIG domain CDL62_RS12050 PF02806 Alpha amylase, C-terminal all-beta domain CDL62_RS12065 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CDL62_RS12065 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CDL62_RS12065 PF01189 16S rRNA methyltransferase RsmB/F CDL62_RS12070 PF02386 Cation transport protein CDL62_RS12075 PF00795 Carbon-nitrogen hydrolase CDL62_RS12075 PF00583 Acetyltransferase (GNAT) family CDL62_RS12095 PF00378 Enoyl-CoA hydratase/isomerase CDL62_RS12100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CDL62_RS12105 PF00425 chorismate binding enzyme CDL62_RS12110 PF00593 TonB dependent receptor CDL62_RS12110 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS12130 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS12130 PF00593 TonB dependent receptor CDL62_RS12145 PF00005 ABC transporter CDL62_RS12145 PF13732 Domain of unknown function (DUF4162) CDL62_RS12155 PF13492 GAF domain CDL62_RS12155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS12155 PF07694 5TMR of 5TMR-LYT CDL62_RS12155 PF06580 Histidine kinase CDL62_RS12160 PF04397 LytTr DNA-binding domain CDL62_RS12160 PF00072 Response regulator receiver domain CDL62_RS12175 PF04011 LemA family CDL62_RS12195 PF01593 Flavin containing amine oxidoreductase CDL62_RS12200 PF01593 Flavin containing amine oxidoreductase CDL62_RS12250 PF02687 FtsX-like permease family CDL62_RS12250 PF12704 MacB-like periplasmic core domain CDL62_RS12260 PF00005 ABC transporter CDL62_RS12290 PF00593 TonB dependent receptor CDL62_RS12290 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS12310 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS12310 PF00593 TonB dependent receptor CDL62_RS12325 PF00963 Cohesin domain CDL62_RS12325 PF01522 Polysaccharide deacetylase CDL62_RS12335 PF04616 Glycosyl hydrolases family 43 CDL62_RS12335 PF16369 C-terminal lipocalin-like domain CDL62_RS12340 PF00703 Glycosyl hydrolases family 2 CDL62_RS12340 PF02837 Glycosyl hydrolases family 2, sugar binding domain CDL62_RS12340 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CDL62_RS12340 PF16355 Domain of unknown function (DUF4982) CDL62_RS12340 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CDL62_RS12345 PF01055 Glycosyl hydrolases family 31 CDL62_RS12345 PF13802 Galactose mutarotase-like CDL62_RS12350 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CDL62_RS12350 PF14508 Glycosyl-hydrolase 97 N-terminal CDL62_RS12350 PF10566 Glycoside hydrolase 97 CDL62_RS12360 PF04055 Radical SAM superfamily CDL62_RS12365 PF00111 2Fe-2S iron-sulfur cluster binding domain CDL62_RS12365 PF00175 Oxidoreductase NAD-binding domain CDL62_RS12365 PF00970 Oxidoreductase FAD-binding domain CDL62_RS12370 PF00672 HAMP domain CDL62_RS12370 PF01627 Hpt domain CDL62_RS12370 PF00072 Response regulator receiver domain CDL62_RS12370 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS12370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS12370 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS12405 PF00781 Diacylglycerol kinase catalytic domain CDL62_RS12410 PF17932 Tetracyclin repressor-like, C-terminal domain CDL62_RS12410 PF00440 Bacterial regulatory proteins, tetR family CDL62_RS12420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDL62_RS12425 PF00873 AcrB/AcrD/AcrF family CDL62_RS12440 PF02028 BCCT, betaine/carnitine/choline family transporter CDL62_RS12445 PF07690 Major Facilitator Superfamily CDL62_RS12450 PF00480 ROK family CDL62_RS12455 PF00291 Pyridoxal-phosphate dependent enzyme CDL62_RS12460 PF02698 DUF218 domain CDL62_RS12465 PF07690 Major Facilitator Superfamily CDL62_RS12480 PF03606 C4-dicarboxylate anaerobic carrier CDL62_RS12485 PF00293 NUDIX domain CDL62_RS12485 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CDL62_RS12485 PF09297 NADH pyrophosphatase zinc ribbon domain CDL62_RS12500 PF03806 AbgT putative transporter family CDL62_RS12505 PF01256 Carbohydrate kinase CDL62_RS12505 PF03853 YjeF-related protein N-terminus CDL62_RS12515 PF01546 Peptidase family M20/M25/M40 CDL62_RS12515 PF07687 Peptidase dimerisation domain CDL62_RS12525 PF00005 ABC transporter CDL62_RS12530 PF01300 Telomere recombination CDL62_RS12530 PF03481 Putative GTP-binding controlling metal-binding CDL62_RS12545 PF02156 Glycosyl hydrolase family 26 CDL62_RS12550 PF13509 S1 domain CDL62_RS12550 PF17783 CvfB-like winged helix domain CDL62_RS12555 PF00154 recA bacterial DNA recombination protein CDL62_RS12560 PF00578 AhpC/TSA family CDL62_RS12580 PF12127 SigmaW regulon antibacterial CDL62_RS12595 PF00873 AcrB/AcrD/AcrF family CDL62_RS12620 PF01668 SmpB protein CDL62_RS12640 PF00149 Calcineurin-like phosphoesterase CDL62_RS12645 PF00106 short chain dehydrogenase CDL62_RS12650 PF03793 PASTA domain CDL62_RS12650 PF00069 Protein kinase domain CDL62_RS12655 PF00464 Serine hydroxymethyltransferase CDL62_RS12665 PF00571 CBS domain CDL62_RS12665 PF00478 IMP dehydrogenase / GMP reductase domain CDL62_RS12670 PF00166 Chaperonin 10 Kd subunit CDL62_RS12685 PF03060 Nitronate monooxygenase CDL62_RS12700 PF02824 TGS domain CDL62_RS12700 PF04607 Region found in RelA / SpoT proteins CDL62_RS12700 PF13291 ACT domain CDL62_RS12705 PF01475 Ferric uptake regulator family CDL62_RS12710 PF00709 Adenylosuccinate synthetase CDL62_RS12760 PF00814 Glycoprotease family CDL62_RS12770 PF01618 MotA/TolQ/ExbB proton channel family CDL62_RS12775 PF02472 Biopolymer transport protein ExbD/TolR CDL62_RS12790 PF00593 TonB dependent receptor CDL62_RS12800 PF03176 MMPL family CDL62_RS12830 PF01066 CDP-alcohol phosphatidyltransferase CDL62_RS12840 PF00106 short chain dehydrogenase CDL62_RS12885 PF01594 AI-2E family transporter CDL62_RS12900 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS12900 PF00593 TonB dependent receptor CDL62_RS12925 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CDL62_RS12930 PF00544 Pectate lyase CDL62_RS12935 PF13229 Right handed beta helix region CDL62_RS12940 PF00311 Phosphoenolpyruvate carboxylase CDL62_RS12945 PF07690 Major Facilitator Superfamily CDL62_RS12950 PF04616 Glycosyl hydrolases family 43 CDL62_RS12955 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CDL62_RS12955 PF04616 Glycosyl hydrolases family 43 CDL62_RS12980 PF05684 Protein of unknown function (DUF819) CDL62_RS12990 PF03788 LrgA family CDL62_RS13010 PF13667 ThiC-associated domain CDL62_RS13010 PF01964 Radical SAM ThiC family CDL62_RS13015 PF02581 Thiamine monophosphate synthase CDL62_RS13020 PF08543 Phosphomethylpyrimidine kinase CDL62_RS13025 PF02581 Thiamine monophosphate synthase CDL62_RS13030 PF05690 Thiazole biosynthesis protein ThiG CDL62_RS13035 PF04055 Radical SAM superfamily CDL62_RS13035 PF06968 Biotin and Thiamin Synthesis associated domain CDL62_RS13060 PF00899 ThiF family CDL62_RS13065 PF13378 Enolase C-terminal domain-like CDL62_RS13065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CDL62_RS13075 PF01040 UbiA prenyltransferase family CDL62_RS13095 PF03806 AbgT putative transporter family CDL62_RS13105 PF03061 Thioesterase superfamily CDL62_RS13130 PF00005 ABC transporter CDL62_RS13130 PF12848 ABC transporter CDL62_RS13135 PF01048 Phosphorylase superfamily CDL62_RS13140 PF13193 AMP-binding enzyme C-terminal domain CDL62_RS13140 PF00501 AMP-binding enzyme CDL62_RS13155 PF00535 Glycosyl transferase family 2 CDL62_RS13175 PF03881 Fructosamine kinase CDL62_RS13180 PF00529 HlyD membrane-fusion protein of T1SS CDL62_RS13180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDL62_RS13185 PF00873 AcrB/AcrD/AcrF family CDL62_RS13195 PF00593 TonB dependent receptor CDL62_RS13195 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS13200 PF07980 SusD family CDL62_RS13200 PF14322 Starch-binding associating with outer membrane CDL62_RS13205 PF01695 IstB-like ATP binding protein CDL62_RS13225 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDL62_RS13265 PF00535 Glycosyl transferase family 2 CDL62_RS13280 PF07690 Major Facilitator Superfamily CDL62_RS13290 PF07075 Protein of unknown function (DUF1343) CDL62_RS13305 PF00578 AhpC/TSA family CDL62_RS13315 PF13173 AAA domain CDL62_RS13315 PF13635 Domain of unknown function (DUF4143) CDL62_RS13330 PF02525 Flavodoxin-like fold CDL62_RS13345 PF07075 Protein of unknown function (DUF1343) CDL62_RS13350 PF00144 Beta-lactamase CDL62_RS13385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDL62_RS13385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDL62_RS13390 PF02096 60Kd inner membrane protein CDL62_RS13390 PF14849 YidC periplasmic domain CDL62_RS13395 PF00117 Glutamine amidotransferase class-I CDL62_RS13395 PF06418 CTP synthase N-terminus CDL62_RS13410 PF01746 tRNA (Guanine-1)-methyltransferase CDL62_RS13420 PF02779 Transketolase, pyrimidine binding domain CDL62_RS13420 PF16870 2-oxoglutarate dehydrogenase C-terminal CDL62_RS13420 PF00676 Dehydrogenase E1 component CDL62_RS13420 PF16078 2-oxoglutarate dehydrogenase N-terminus CDL62_RS13425 PF02817 e3 binding domain CDL62_RS13425 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CDL62_RS13425 PF00364 Biotin-requiring enzyme CDL62_RS13430 PF02225 PA domain CDL62_RS13430 PF04389 Peptidase family M28 CDL62_RS13445 PF13369 Transglutaminase-like superfamily CDL62_RS13465 PF00072 Response regulator receiver domain CDL62_RS13465 PF00486 Transcriptional regulatory protein, C terminal CDL62_RS13470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS13470 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS13470 PF01627 Hpt domain CDL62_RS13470 PF00072 Response regulator receiver domain CDL62_RS13470 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS13470 PF00672 HAMP domain CDL62_RS13480 PF00155 Aminotransferase class I and II CDL62_RS13485 PF07660 Secretin and TonB N terminus short domain CDL62_RS13485 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS13485 PF00593 TonB dependent receptor CDL62_RS13500 PF04127 DNA / pantothenate metabolism flavoprotein CDL62_RS13500 PF02441 Flavoprotein CDL62_RS13510 PF02463 RecF/RecN/SMC N terminal domain CDL62_RS13520 PF01507 Phosphoadenosine phosphosulfate reductase family CDL62_RS13525 PF00009 Elongation factor Tu GTP binding domain CDL62_RS13530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS13540 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CDL62_RS13540 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CDL62_RS13540 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CDL62_RS13540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDL62_RS13540 PF10371 Domain of unknown function CDL62_RS13545 PF01544 CorA-like Mg2+ transporter protein CDL62_RS13550 PF01699 Sodium/calcium exchanger protein CDL62_RS13555 PF00175 Oxidoreductase NAD-binding domain CDL62_RS13555 PF00111 2Fe-2S iron-sulfur cluster binding domain CDL62_RS13555 PF00970 Oxidoreductase FAD-binding domain CDL62_RS13565 PF16363 GDP-mannose 4,6 dehydratase CDL62_RS13570 PF16363 GDP-mannose 4,6 dehydratase CDL62_RS13580 PF01380 SIS domain CDL62_RS13590 PF09334 tRNA synthetases class I (M) CDL62_RS13590 PF01588 Putative tRNA binding domain CDL62_RS13590 PF08264 Anticodon-binding domain of tRNA CDL62_RS13595 PF02016 LD-carboxypeptidase N-terminal domain CDL62_RS13595 PF17676 LD-carboxypeptidase C-terminal domain CDL62_RS13600 PF02021 Uncharacterised protein family UPF0102 CDL62_RS13610 PF02203 Tar ligand binding domain homologue CDL62_RS13610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDL62_RS13610 PF00672 HAMP domain CDL62_RS13615 PF13407 Periplasmic binding protein domain CDL62_RS13625 PF01451 Low molecular weight phosphotyrosine protein phosphatase CDL62_RS13640 PF06165 Glycosyltransferase family 36 CDL62_RS13640 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CDL62_RS13645 PF00759 Glycosyl hydrolase family 9 CDL62_RS13645 PF02927 Cellulase N-terminal ig-like domain CDL62_RS13650 PF16355 Domain of unknown function (DUF4982) CDL62_RS13650 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CDL62_RS13650 PF00703 Glycosyl hydrolases family 2 CDL62_RS13650 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CDL62_RS13650 PF02837 Glycosyl hydrolases family 2, sugar binding domain CDL62_RS13655 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS13655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS13655 PF00072 Response regulator receiver domain CDL62_RS13655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS13655 PF01627 Hpt domain CDL62_RS13655 PF00672 HAMP domain CDL62_RS13665 PF00150 Cellulase (glycosyl hydrolase family 5) CDL62_RS13665 PF13004 Putative binding domain, N-terminal CDL62_RS13670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS13670 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS13670 PF12833 Helix-turn-helix domain CDL62_RS13670 PF07494 Two component regulator propeller CDL62_RS13670 PF00072 Response regulator receiver domain CDL62_RS13670 PF07495 Y_Y_Y domain CDL62_RS13685 PF02929 Beta galactosidase small chain CDL62_RS13685 PF00703 Glycosyl hydrolases family 2 CDL62_RS13685 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CDL62_RS13685 PF02837 Glycosyl hydrolases family 2, sugar binding domain CDL62_RS13685 PF16353 Domain of unknown function(DUF4981) CDL62_RS13690 PF07495 Y_Y_Y domain CDL62_RS13690 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS13690 PF12833 Helix-turn-helix domain CDL62_RS13690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS13690 PF00072 Response regulator receiver domain CDL62_RS13690 PF07494 Two component regulator propeller CDL62_RS13710 PF04616 Glycosyl hydrolases family 43 CDL62_RS13710 PF03422 Carbohydrate binding module (family 6) CDL62_RS13720 PF00593 TonB dependent receptor CDL62_RS13720 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS13730 PF00207 Alpha-2-macroglobulin family CDL62_RS13730 PF07703 Alpha-2-macroglobulin bait region domain CDL62_RS13730 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CDL62_RS13730 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CDL62_RS13730 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CDL62_RS13730 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CDL62_RS13730 PF01835 MG2 domain CDL62_RS13730 PF17962 Bacterial macroglobulin domain 6 CDL62_RS13735 PF06832 Penicillin-Binding Protein C-terminus Family CDL62_RS13735 PF00912 Transglycosylase CDL62_RS13735 PF00905 Penicillin binding protein transpeptidase domain CDL62_RS13745 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CDL62_RS13745 PF00128 Alpha amylase, catalytic domain CDL62_RS13750 PF11941 Domain of unknown function (DUF3459) CDL62_RS13750 PF00128 Alpha amylase, catalytic domain CDL62_RS13755 PF02446 4-alpha-glucanotransferase CDL62_RS13770 PF00072 Response regulator receiver domain CDL62_RS13770 PF00990 Diguanylate cyclase, GGDEF domain CDL62_RS13775 PF00072 Response regulator receiver domain CDL62_RS13775 PF01627 Hpt domain CDL62_RS13775 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS13775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS13775 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS13775 PF00672 HAMP domain CDL62_RS13780 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS13780 PF09308 LuxQ, periplasmic CDL62_RS13780 PF00072 Response regulator receiver domain CDL62_RS13780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS13785 PF00498 FHA domain CDL62_RS13785 PF01061 ABC-2 type transporter CDL62_RS13785 PF00005 ABC transporter CDL62_RS13790 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS13790 PF09308 LuxQ, periplasmic CDL62_RS13790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS13790 PF00072 Response regulator receiver domain CDL62_RS13805 PF00801 PKD domain CDL62_RS13805 PF05547 Immune inhibitor A peptidase M6 CDL62_RS13815 PF00691 OmpA family CDL62_RS13830 PF14489 QueF-like protein CDL62_RS13835 PF05958 tRNA (Uracil-5-)-methyltransferase CDL62_RS13835 PF01938 TRAM domain CDL62_RS13840 PF00072 Response regulator receiver domain CDL62_RS13840 PF04397 LytTr DNA-binding domain CDL62_RS13855 PF08220 DeoR-like helix-turn-helix domain CDL62_RS13855 PF00455 DeoR C terminal sensor domain CDL62_RS13865 PF00133 tRNA synthetases class I (I, L, M and V) CDL62_RS13865 PF08264 Anticodon-binding domain of tRNA CDL62_RS13875 PF01252 Signal peptidase (SPase) II CDL62_RS13880 PF01966 HD domain CDL62_RS13880 PF07697 7TM-HD extracellular CDL62_RS13880 PF07698 7TM receptor with intracellular HD hydrolase CDL62_RS13890 PF00293 NUDIX domain CDL62_RS13915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDL62_RS13915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDL62_RS13915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDL62_RS13915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDL62_RS13920 PF01380 SIS domain CDL62_RS13920 PF00571 CBS domain CDL62_RS13925 PF01894 Uncharacterised protein family UPF0047 CDL62_RS13930 PF13419 Haloacid dehalogenase-like hydrolase CDL62_RS13945 PF01047 MarR family CDL62_RS14060 PF01695 IstB-like ATP binding protein CDL62_RS14065 PF00665 Integrase core domain CDL62_RS14080 PF03167 Uracil DNA glycosylase superfamily CDL62_RS14085 PF12833 Helix-turn-helix domain CDL62_RS14085 PF00072 Response regulator receiver domain CDL62_RS14085 PF07495 Y_Y_Y domain CDL62_RS14085 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS14085 PF07494 Two component regulator propeller CDL62_RS14085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS14095 PF13472 GDSL-like Lipase/Acylhydrolase family CDL62_RS14100 PF07470 Glycosyl Hydrolase Family 88 CDL62_RS14105 PF00474 Sodium:solute symporter family CDL62_RS14115 PF12544 Lysine-2,3-aminomutase CDL62_RS14115 PF04055 Radical SAM superfamily CDL62_RS14120 PF01432 Peptidase family M3 CDL62_RS14130 PF00881 Nitroreductase family CDL62_RS14145 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CDL62_RS14145 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDL62_RS14160 PF01751 Toprim domain CDL62_RS14160 PF00986 DNA gyrase B subunit, carboxyl terminus CDL62_RS14160 PF00204 DNA gyrase B CDL62_RS14160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS14170 PF04539 Sigma-70 region 3 CDL62_RS14170 PF04545 Sigma-70, region 4 CDL62_RS14170 PF04542 Sigma-70 region 2 CDL62_RS14170 PF00140 Sigma-70 factor, region 1.2 CDL62_RS14170 PF03979 Sigma-70 factor, region 1.1 CDL62_RS14175 PF13180 PDZ domain CDL62_RS14185 PF01678 Diaminopimelate epimerase CDL62_RS14190 PF17757 UvrB interaction domain CDL62_RS14190 PF12344 Ultra-violet resistance protein B CDL62_RS14190 PF04851 Type III restriction enzyme, res subunit CDL62_RS14190 PF00271 Helicase conserved C-terminal domain CDL62_RS14200 PF00501 AMP-binding enzyme CDL62_RS14205 PF00392 Bacterial regulatory proteins, gntR family CDL62_RS14205 PF07729 FCD domain CDL62_RS14210 PF00728 Glycosyl hydrolase family 20, catalytic domain CDL62_RS14210 PF02838 Glycosyl hydrolase family 20, domain 2 CDL62_RS14215 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CDL62_RS14215 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CDL62_RS14215 PF02769 AIR synthase related protein, C-terminal domain CDL62_RS14220 PF00107 Zinc-binding dehydrogenase CDL62_RS14220 PF08240 Alcohol dehydrogenase GroES-like domain CDL62_RS14250 PF02545 Maf-like protein CDL62_RS14255 PF10459 Peptidase S46 CDL62_RS14270 PF01569 PAP2 superfamily CDL62_RS14280 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDL62_RS14305 PF00501 AMP-binding enzyme CDL62_RS14315 PF03668 P-loop ATPase protein family CDL62_RS14320 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CDL62_RS14320 PF00361 Proton-conducting membrane transporter CDL62_RS14320 PF13244 Domain of unknown function (DUF4040) CDL62_RS14325 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CDL62_RS14330 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CDL62_RS14335 PF00361 Proton-conducting membrane transporter CDL62_RS14345 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CDL62_RS14350 PF03334 Na+/H+ antiporter subunit CDL62_RS14355 PF12804 MobA-like NTP transferase domain CDL62_RS14380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDL62_RS14380 PF02770 Acyl-CoA dehydrogenase, middle domain CDL62_RS14380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDL62_RS14385 PF01012 Electron transfer flavoprotein domain CDL62_RS14385 PF00766 Electron transfer flavoprotein FAD-binding domain CDL62_RS14390 PF01012 Electron transfer flavoprotein domain CDL62_RS14395 PF01641 SelR domain CDL62_RS14405 PF02754 Cysteine-rich domain CDL62_RS14415 PF00005 ABC transporter CDL62_RS14415 PF00664 ABC transporter transmembrane region CDL62_RS14420 PF08328 Adenylosuccinate lyase C-terminal CDL62_RS14420 PF00206 Lyase CDL62_RS14425 PF01972 Serine dehydrogenase proteinase CDL62_RS14425 PF01957 NfeD-like C-terminal, partner-binding CDL62_RS14440 PF00875 DNA photolyase CDL62_RS14440 PF03441 FAD binding domain of DNA photolyase CDL62_RS14485 PF00183 Hsp90 protein CDL62_RS14495 PF01168 Alanine racemase, N-terminal domain CDL62_RS14500 PF00270 DEAD/DEAH box helicase CDL62_RS14500 PF00271 Helicase conserved C-terminal domain CDL62_RS14530 PF00561 alpha/beta hydrolase fold CDL62_RS14550 PF00665 Integrase core domain CDL62_RS14550 PF08281 Sigma-70, region 4 CDL62_RS14555 PF01695 IstB-like ATP binding protein CDL62_RS14565 PF00665 Integrase core domain CDL62_RS14575 PF01609 Transposase DDE domain CDL62_RS14635 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDL62_RS14645 PF02661 Fic/DOC family CDL62_RS14645 PF13784 Fic/DOC family N-terminal CDL62_RS14680 PF00665 Integrase core domain CDL62_RS14690 PF01695 IstB-like ATP binding protein CDL62_RS14695 PF17191 RecG wedge domain CDL62_RS14695 PF00270 DEAD/DEAH box helicase CDL62_RS14695 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CDL62_RS14715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS14715 PF00072 Response regulator receiver domain CDL62_RS14715 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS14715 PF09308 LuxQ, periplasmic CDL62_RS14730 PF07728 AAA domain (dynein-related subfamily) CDL62_RS14730 PF12102 Domain of unknown function (DUF3578) CDL62_RS14765 PF00145 C-5 cytosine-specific DNA methylase CDL62_RS14765 PF00145 C-5 cytosine-specific DNA methylase CDL62_RS14775 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDL62_RS14790 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDL62_RS14795 PF13091 PLD-like domain CDL62_RS14795 PF13087 AAA domain CDL62_RS14800 PF00665 Integrase core domain CDL62_RS14805 PF01695 IstB-like ATP binding protein CDL62_RS14810 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDL62_RS14815 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CDL62_RS14845 PF13635 Domain of unknown function (DUF4143) CDL62_RS14845 PF13173 AAA domain CDL62_RS14855 PF00578 AhpC/TSA family CDL62_RS14880 PF01695 IstB-like ATP binding protein CDL62_RS14885 PF00665 Integrase core domain CDL62_RS14895 PF00270 DEAD/DEAH box helicase CDL62_RS14895 PF17191 RecG wedge domain CDL62_RS14895 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CDL62_RS14905 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDL62_RS14925 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CDL62_RS14925 PF17191 RecG wedge domain CDL62_RS14925 PF00270 DEAD/DEAH box helicase CDL62_RS14950 PF13173 AAA domain CDL62_RS14950 PF13635 Domain of unknown function (DUF4143) CDL62_RS15040 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDL62_RS15065 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CDL62_RS15065 PF17191 RecG wedge domain CDL62_RS15065 PF00270 DEAD/DEAH box helicase CDL62_RS15070 PF01695 IstB-like ATP binding protein CDL62_RS15075 PF00665 Integrase core domain CDL62_RS15075 PF08281 Sigma-70, region 4 CDL62_RS15095 PF11855 Protein of unknown function (DUF3375) CDL62_RS15110 PF17191 RecG wedge domain CDL62_RS15110 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CDL62_RS15110 PF00270 DEAD/DEAH box helicase CDL62_RS15150 PF13361 UvrD-like helicase C-terminal domain CDL62_RS15150 PF00580 UvrD/REP helicase N-terminal domain CDL62_RS15155 PF02463 RecF/RecN/SMC N terminal domain CDL62_RS15160 PF02384 N-6 DNA Methylase CDL62_RS15165 PF07669 Eco57I restriction-modification methylase CDL62_RS15225 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDL62_RS15245 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDL62_RS15280 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDL62_RS15305 PF17191 RecG wedge domain CDL62_RS15305 PF00270 DEAD/DEAH box helicase CDL62_RS15305 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CDL62_RS15310 PF04851 Type III restriction enzyme, res subunit CDL62_RS15310 PF08463 EcoEI R protein C-terminal CDL62_RS15310 PF00271 Helicase conserved C-terminal domain CDL62_RS15310 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CDL62_RS15325 PF12161 HsdM N-terminal domain CDL62_RS15325 PF02384 N-6 DNA Methylase CDL62_RS15350 PF00270 DEAD/DEAH box helicase CDL62_RS15350 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CDL62_RS15350 PF17191 RecG wedge domain CDL62_RS15470 PF00145 C-5 cytosine-specific DNA methylase CDL62_RS15470 PF00145 C-5 cytosine-specific DNA methylase CDL62_RS15510 PF00270 DEAD/DEAH box helicase CDL62_RS15510 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CDL62_RS15510 PF17191 RecG wedge domain CDL62_RS15540 PF17191 RecG wedge domain CDL62_RS15540 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CDL62_RS15540 PF00270 DEAD/DEAH box helicase CDL62_RS15555 PF00145 C-5 cytosine-specific DNA methylase CDL62_RS15635 PF02384 N-6 DNA Methylase CDL62_RS15650 PF13673 Acetyltransferase (GNAT) domain CDL62_RS15655 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CDL62_RS15815 PF02899 Phage integrase, N-terminal SAM-like domain CDL62_RS15815 PF00589 Phage integrase family CDL62_RS15820 PF05683 Fumarase C-terminus CDL62_RS15820 PF05681 Fumarate hydratase (Fumerase) CDL62_RS15825 PF01965 DJ-1/PfpI family CDL62_RS15830 PF00877 NlpC/P60 family CDL62_RS15845 PF02469 Fasciclin domain CDL62_RS15850 PF02469 Fasciclin domain CDL62_RS15855 PF02469 Fasciclin domain CDL62_RS15860 PF02469 Fasciclin domain CDL62_RS15875 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CDL62_RS15875 PF04616 Glycosyl hydrolases family 43 CDL62_RS15885 PF02687 FtsX-like permease family CDL62_RS15885 PF12704 MacB-like periplasmic core domain CDL62_RS15895 PF00005 ABC transporter CDL62_RS15905 PF13533 Biotin-lipoyl like CDL62_RS15915 PF00072 Response regulator receiver domain CDL62_RS15915 PF00158 Sigma-54 interaction domain CDL62_RS15915 PF02954 Bacterial regulatory protein, Fis family CDL62_RS15920 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS15920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS15940 PF00092 von Willebrand factor type A domain CDL62_RS15945 PF00092 von Willebrand factor type A domain CDL62_RS15955 PF01882 Protein of unknown function DUF58 CDL62_RS15960 PF17863 AAA lid domain CDL62_RS15960 PF07726 ATPase family associated with various cellular activities (AAA) CDL62_RS15965 PF01592 NifU-like N terminal domain CDL62_RS15965 PF01106 NifU-like domain CDL62_RS15965 PF04324 BFD-like [2Fe-2S] binding domain CDL62_RS15970 PF02547 Queuosine biosynthesis protein CDL62_RS15980 PF01979 Amidohydrolase family CDL62_RS15995 PF00132 Bacterial transferase hexapeptide (six repeats) CDL62_RS16005 PF02706 Chain length determinant protein CDL62_RS16005 PF13614 AAA domain CDL62_RS16005 PF13807 G-rich domain on putative tyrosine kinase CDL62_RS16015 PF00953 Glycosyl transferase family 4 CDL62_RS16025 PF02706 Chain length determinant protein CDL62_RS16025 PF13807 G-rich domain on putative tyrosine kinase CDL62_RS16025 PF13614 AAA domain CDL62_RS16030 PF01565 FAD binding domain CDL62_RS16030 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CDL62_RS16035 PF01554 MatE CDL62_RS16070 PF03631 Virulence factor BrkB CDL62_RS16075 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDL62_RS16085 PF16658 Class II release factor RF3, C-terminal domain CDL62_RS16085 PF00009 Elongation factor Tu GTP binding domain CDL62_RS16095 PF00364 Biotin-requiring enzyme CDL62_RS16100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDL62_RS16100 PF00289 Biotin carboxylase, N-terminal domain CDL62_RS16100 PF02785 Biotin carboxylase C-terminal domain CDL62_RS16105 PF00210 Ferritin-like domain CDL62_RS16110 PF02926 THUMP domain CDL62_RS16110 PF01170 Putative RNA methylase family UPF0020 CDL62_RS16110 PF10672 S-adenosylmethionine-dependent methyltransferase CDL62_RS16125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDL62_RS16125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDL62_RS16125 PF01842 ACT domain CDL62_RS16145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDL62_RS16145 PF03466 LysR substrate binding domain CDL62_RS16165 PF00180 Isocitrate/isopropylmalate dehydrogenase CDL62_RS16165 PF18324 Hypothetical protein TT1725 CDL62_RS16175 PF00072 Response regulator receiver domain CDL62_RS16175 PF08448 PAS fold CDL62_RS16175 PF13426 PAS domain CDL62_RS16175 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS16175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS16180 PF00920 Dehydratase family CDL62_RS16205 PF00196 Bacterial regulatory proteins, luxR family CDL62_RS16205 PF00072 Response regulator receiver domain CDL62_RS16210 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS16210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS16210 PF00672 HAMP domain CDL62_RS16245 PF12631 MnmE helical domain CDL62_RS16245 PF10396 GTP-binding protein TrmE N-terminus CDL62_RS16245 PF01926 50S ribosome-binding GTPase CDL62_RS16250 PF02629 CoA binding domain CDL62_RS16250 PF00549 CoA-ligase CDL62_RS16255 PF01139 tRNA-splicing ligase RtcB CDL62_RS16260 PF01435 Peptidase family M48 CDL62_RS16270 PF01575 MaoC like domain CDL62_RS16280 PF00156 Phosphoribosyl transferase domain CDL62_RS16285 PF00072 Response regulator receiver domain CDL62_RS16290 PF00313 'Cold-shock' DNA-binding domain CDL62_RS16295 PF02146 Sir2 family CDL62_RS16305 PF00871 Acetokinase family CDL62_RS16310 PF01515 Phosphate acetyl/butaryl transferase CDL62_RS16315 PF00871 Acetokinase family CDL62_RS16320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CDL62_RS16320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDL62_RS16325 PF01515 Phosphate acetyl/butaryl transferase CDL62_RS16330 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS16330 PF00593 TonB dependent receptor CDL62_RS16335 PF07690 Major Facilitator Superfamily CDL62_RS16345 PF00795 Carbon-nitrogen hydrolase CDL62_RS16360 PF00465 Iron-containing alcohol dehydrogenase CDL62_RS16375 PF00885 6,7-dimethyl-8-ribityllumazine synthase CDL62_RS16385 PF13476 AAA domain CDL62_RS16395 PF00334 Nucleoside diphosphate kinase CDL62_RS16405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDL62_RS16405 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CDL62_RS16420 PF00909 Ammonium Transporter Family CDL62_RS16425 PF00543 Nitrogen regulatory protein P-II CDL62_RS16450 PF00691 OmpA family CDL62_RS16460 PF00593 TonB dependent receptor CDL62_RS16460 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS16475 PF00722 Glycosyl hydrolases family 16 CDL62_RS16480 PF00072 Response regulator receiver domain CDL62_RS16485 PF00144 Beta-lactamase CDL62_RS16490 PF02585 GlcNAc-PI de-N-acetylase CDL62_RS16490 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CDL62_RS16495 PF02127 Aminopeptidase I zinc metalloprotease (M18) CDL62_RS16505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDL62_RS16505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDL62_RS16515 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CDL62_RS16515 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CDL62_RS16520 PF01613 Flavin reductase like domain CDL62_RS16525 PF13361 UvrD-like helicase C-terminal domain CDL62_RS16525 PF00580 UvrD/REP helicase N-terminal domain CDL62_RS16525 PF12705 PD-(D/E)XK nuclease superfamily CDL62_RS16530 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase CDL62_RS16530 PF01676 Metalloenzyme superfamily CDL62_RS16535 PF14821 Threonine synthase N terminus CDL62_RS16535 PF00291 Pyridoxal-phosphate dependent enzyme CDL62_RS16545 PF07724 AAA domain (Cdc48 subfamily) CDL62_RS16545 PF02861 Clp amino terminal domain, pathogenicity island component CDL62_RS16545 PF10431 C-terminal, D2-small domain, of ClpB protein CDL62_RS16545 PF17871 AAA lid domain CDL62_RS16545 PF00004 ATPase family associated with various cellular activities (AAA) CDL62_RS16550 PF03989 DNA gyrase C-terminal domain, beta-propeller CDL62_RS16550 PF00521 DNA gyrase/topoisomerase IV, subunit A CDL62_RS16560 PF00144 Beta-lactamase CDL62_RS16570 PF08534 Redoxin CDL62_RS16585 PF01180 Dihydroorotate dehydrogenase CDL62_RS16590 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDL62_RS16605 PF00258 Flavodoxin CDL62_RS16610 PF02779 Transketolase, pyrimidine binding domain CDL62_RS16610 PF02780 Transketolase, C-terminal domain CDL62_RS16615 PF00364 Biotin-requiring enzyme CDL62_RS16615 PF02817 e3 binding domain CDL62_RS16615 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CDL62_RS16620 PF01212 Beta-eliminating lyase CDL62_RS16630 PF00180 Isocitrate/isopropylmalate dehydrogenase CDL62_RS16640 PF12169 DNA polymerase III subunits gamma and tau domain III CDL62_RS16645 PF02690 Na+/Pi-cotransporter CDL62_RS16660 PF18693 TRAM domain CDL62_RS16660 PF00919 Uncharacterized protein family UPF0004 CDL62_RS16660 PF04055 Radical SAM superfamily CDL62_RS16665 PF00448 SRP54-type protein, GTPase domain CDL62_RS16665 PF02881 SRP54-type protein, helical bundle domain CDL62_RS16675 PF00471 Ribosomal protein L33 CDL62_RS16680 PF00830 Ribosomal L28 family CDL62_RS16685 PF02464 Competence-damaged protein CDL62_RS16685 PF00994 Probable molybdopterin binding domain CDL62_RS16685 PF18146 Damage-inducible protein CinA KH domain CDL62_RS16690 PF16491 CAAX prenyl protease N-terminal, five membrane helices CDL62_RS16690 PF01435 Peptidase family M48 CDL62_RS16695 PF01790 Prolipoprotein diacylglyceryl transferase CDL62_RS16700 PF07517 SecA DEAD-like domain CDL62_RS16700 PF01043 SecA preprotein cross-linking domain CDL62_RS16700 PF07516 SecA Wing and Scaffold domain CDL62_RS16700 PF02810 SEC-C motif CDL62_RS16715 PF17773 UPF0176 acylphosphatase like domain CDL62_RS16715 PF12368 Rhodanase C-terminal CDL62_RS16715 PF00581 Rhodanese-like domain CDL62_RS16720 PF01207 Dihydrouridine synthase (Dus) CDL62_RS16730 PF01212 Beta-eliminating lyase CDL62_RS16745 PF02824 TGS domain CDL62_RS16745 PF13291 ACT domain CDL62_RS16745 PF04607 Region found in RelA / SpoT proteins CDL62_RS16765 PF12826 Helix-hairpin-helix motif CDL62_RS16765 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CDL62_RS16765 PF03120 NAD-dependent DNA ligase OB-fold domain CDL62_RS16765 PF01653 NAD-dependent DNA ligase adenylation domain CDL62_RS16765 PF00533 BRCA1 C Terminus (BRCT) domain CDL62_RS16785 PF01205 Uncharacterized protein family UPF0029 CDL62_RS16785 PF09186 Domain of unknown function (DUF1949) CDL62_RS16790 PF02525 Flavodoxin-like fold CDL62_RS16800 PF05139 Erythromycin esterase CDL62_RS16800 PF00156 Phosphoribosyl transferase domain CDL62_RS16810 PF04434 SWIM zinc finger CDL62_RS16810 PF00176 SNF2 family N-terminal domain CDL62_RS16810 PF00271 Helicase conserved C-terminal domain CDL62_RS16820 PF13460 NAD(P)H-binding CDL62_RS16820 PF11066 Protein of unknown function (DUF2867) CDL62_RS16825 PF02080 TrkA-C domain CDL62_RS16825 PF06826 Predicted Permease Membrane Region CDL62_RS16830 PF00457 Glycosyl hydrolases family 11 CDL62_RS16845 PF00331 Glycosyl hydrolase family 10 CDL62_RS16845 PF03422 Carbohydrate binding module (family 6) CDL62_RS16845 PF00553 Cellulose binding domain CDL62_RS16850 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CDL62_RS16850 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CDL62_RS16855 PF02881 SRP54-type protein, helical bundle domain CDL62_RS16855 PF02978 Signal peptide binding domain CDL62_RS16855 PF00448 SRP54-type protein, GTPase domain CDL62_RS16860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDL62_RS16860 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDL62_RS16875 PF00586 AIR synthase related protein, N-terminal domain CDL62_RS16875 PF02769 AIR synthase related protein, C-terminal domain CDL62_RS16890 PF09587 Bacterial capsule synthesis protein PGA_cap CDL62_RS16895 PF01751 Toprim domain CDL62_RS16895 PF01131 DNA topoisomerase CDL62_RS16905 PF04055 Radical SAM superfamily CDL62_RS16905 PF01938 TRAM domain CDL62_RS16905 PF00919 Uncharacterized protein family UPF0004 CDL62_RS16910 PF01938 TRAM domain CDL62_RS16910 PF00919 Uncharacterized protein family UPF0004 CDL62_RS16910 PF04055 Radical SAM superfamily CDL62_RS16920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDL62_RS16930 PF01259 SAICAR synthetase CDL62_RS16935 PF02562 PhoH-like protein CDL62_RS16945 PF03819 MazG nucleotide pyrophosphohydrolase domain CDL62_RS16965 PF07676 WD40-like Beta Propeller Repeat CDL62_RS16965 PF03572 Peptidase family S41 CDL62_RS16965 PF14684 Tricorn protease C1 domain CDL62_RS16965 PF14685 Tricorn protease PDZ domain CDL62_RS17020 PF13542 Helix-turn-helix domain of transposase family ISL3 CDL62_RS17020 PF01610 Transposase CDL62_RS17020 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CDL62_RS17035 PF00141 Peroxidase CDL62_RS17060 PF01609 Transposase DDE domain CDL62_RS17135 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CDL62_RS17135 PF01488 Shikimate / quinate 5-dehydrogenase CDL62_RS17135 PF08501 Shikimate dehydrogenase substrate binding domain CDL62_RS17145 PF01416 tRNA pseudouridine synthase CDL62_RS17155 PF00873 AcrB/AcrD/AcrF family CDL62_RS17160 PF00529 HlyD membrane-fusion protein of T1SS CDL62_RS17160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDL62_RS17185 PF01625 Peptide methionine sulfoxide reductase CDL62_RS17195 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDL62_RS17195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDL62_RS17200 PF12002 MgsA AAA+ ATPase C terminal CDL62_RS17200 PF16193 AAA C-terminal domain CDL62_RS17200 PF00004 ATPase family associated with various cellular activities (AAA) CDL62_RS17205 PF00793 DAHP synthetase I family CDL62_RS17210 PF09456 RcsC Alpha-Beta-Loop (ABL) CDL62_RS17210 PF00072 Response regulator receiver domain CDL62_RS17210 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS17210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS17225 PF00155 Aminotransferase class I and II CDL62_RS17235 PF12728 Helix-turn-helix domain CDL62_RS17240 PF01370 NAD dependent epimerase/dehydratase family CDL62_RS17245 PF16363 GDP-mannose 4,6 dehydratase CDL62_RS17250 PF01370 NAD dependent epimerase/dehydratase family CDL62_RS17255 PF01966 HD domain CDL62_RS17255 PF12072 Domain of unknown function (DUF3552) CDL62_RS17255 PF00013 KH domain CDL62_RS17270 PF04055 Radical SAM superfamily CDL62_RS17270 PF11842 Domain of unknown function (DUF3362) CDL62_RS17270 PF08497 Radical SAM N-terminal CDL62_RS17280 PF04055 Radical SAM superfamily CDL62_RS17280 PF16199 Radical_SAM C-terminal domain CDL62_RS17295 PF18030 RimK PreATP-grasp domain CDL62_RS17295 PF08443 RimK-like ATP-grasp domain CDL62_RS17305 PF04452 RNA methyltransferase CDL62_RS17310 PF02082 Transcriptional regulator CDL62_RS17315 PF00365 Phosphofructokinase CDL62_RS17320 PF00535 Glycosyl transferase family 2 CDL62_RS17335 PF17760 UvrA interaction domain CDL62_RS17335 PF17755 UvrA DNA-binding domain CDL62_RS17350 PF01180 Dihydroorotate dehydrogenase CDL62_RS17355 PF01168 Alanine racemase, N-terminal domain CDL62_RS17365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDL62_RS17365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDL62_RS17370 PF00266 Aminotransferase class-V CDL62_RS17375 PF08669 Glycine cleavage T-protein C-terminal barrel domain CDL62_RS17375 PF01571 Aminomethyltransferase folate-binding domain CDL62_RS17385 PF01740 STAS domain CDL62_RS17390 PF02861 Clp amino terminal domain, pathogenicity island component CDL62_RS17390 PF00004 ATPase family associated with various cellular activities (AAA) CDL62_RS17390 PF17871 AAA lid domain CDL62_RS17390 PF10431 C-terminal, D2-small domain, of ClpB protein CDL62_RS17390 PF07724 AAA domain (Cdc48 subfamily) CDL62_RS17410 PF00005 ABC transporter CDL62_RS17410 PF00498 FHA domain CDL62_RS17410 PF01061 ABC-2 type transporter CDL62_RS17425 PF00132 Bacterial transferase hexapeptide (six repeats) CDL62_RS17440 PF01471 Putative peptidoglycan binding domain CDL62_RS17440 PF17820 PDZ domain CDL62_RS17440 PF03572 Peptidase family S41 CDL62_RS17445 PF00117 Glutamine amidotransferase class-I CDL62_RS17445 PF02540 NAD synthase CDL62_RS17445 PF00958 GMP synthase C terminal domain CDL62_RS17450 PF12706 Beta-lactamase superfamily domain CDL62_RS17460 PF00575 S1 RNA binding domain CDL62_RS17465 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDL62_RS17465 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDL62_RS17465 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDL62_RS17470 PF16363 GDP-mannose 4,6 dehydratase CDL62_RS17475 PF00483 Nucleotidyl transferase CDL62_RS17480 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CDL62_RS17485 PF04321 RmlD substrate binding domain CDL62_RS17490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDL62_RS17490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDL62_RS17490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDL62_RS17490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDL62_RS17495 PF13538 UvrD-like helicase C-terminal domain CDL62_RS17495 PF14490 Helix-hairpin-helix containing domain CDL62_RS17495 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CDL62_RS17510 PF10672 S-adenosylmethionine-dependent methyltransferase CDL62_RS17510 PF01170 Putative RNA methylase family UPF0020 CDL62_RS17510 PF02926 THUMP domain CDL62_RS17530 PF00224 Pyruvate kinase, barrel domain CDL62_RS17530 PF02887 Pyruvate kinase, alpha/beta domain CDL62_RS17535 PF01220 Dehydroquinase class II CDL62_RS17540 PF00589 Phage integrase family CDL62_RS17540 PF02899 Phage integrase, N-terminal SAM-like domain CDL62_RS17550 PF08338 Domain of unknown function (DUF1731) CDL62_RS17550 PF01370 NAD dependent epimerase/dehydratase family CDL62_RS17555 PF00924 Mechanosensitive ion channel CDL62_RS17555 PF12794 Mechanosensitive ion channel inner membrane domain 1 CDL62_RS17555 PF12795 Mechanosensitive ion channel porin domain CDL62_RS17560 PF02457 DisA bacterial checkpoint controller nucleotide-binding CDL62_RS17560 PF10372 Bacterial membrane-spanning protein N-terminus CDL62_RS17565 PF00809 Pterin binding enzyme CDL62_RS17580 PF00121 Triosephosphate isomerase CDL62_RS17595 PF00881 Nitroreductase family CDL62_RS17600 PF06508 Queuosine biosynthesis protein QueC CDL62_RS17605 PF04055 Radical SAM superfamily CDL62_RS17610 PF14489 QueF-like protein CDL62_RS17610 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CDL62_RS17620 PF00325 Bacterial regulatory proteins, crp family CDL62_RS17620 PF00027 Cyclic nucleotide-binding domain CDL62_RS17630 PF03063 Prismane/CO dehydrogenase family CDL62_RS17635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDL62_RS17635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDL62_RS17645 PF00202 Aminotransferase class-III CDL62_RS17655 PF05746 DALR anticodon binding domain CDL62_RS17655 PF03485 Arginyl tRNA synthetase N terminal domain CDL62_RS17655 PF00750 tRNA synthetases class I (R) CDL62_RS17660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS17660 PF00072 Response regulator receiver domain CDL62_RS17660 PF09308 LuxQ, periplasmic CDL62_RS17660 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS17680 PF00472 RF-1 domain CDL62_RS17695 PF00248 Aldo/keto reductase family CDL62_RS17700 PF12843 Putative quorum-sensing-regulated virulence factor CDL62_RS17705 PF03422 Carbohydrate binding module (family 6) CDL62_RS17705 PF00404 Dockerin type I domain CDL62_RS17705 PF00756 Putative esterase CDL62_RS17705 PF00331 Glycosyl hydrolase family 10 CDL62_RS17710 PF00501 AMP-binding enzyme CDL62_RS17710 PF13193 AMP-binding enzyme C-terminal domain CDL62_RS17770 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CDL62_RS17770 PF00326 Prolyl oligopeptidase family CDL62_RS17785 PF02421 Ferrous iron transport protein B CDL62_RS17785 PF17910 FeoB cytosolic helical domain CDL62_RS17785 PF07664 Ferrous iron transport protein B C terminus CDL62_RS17785 PF07670 Nucleoside recognition CDL62_RS17785 PF04023 FeoA domain CDL62_RS17790 PF01910 Thiamine-binding protein CDL62_RS17800 PF01029 NusB family CDL62_RS17810 PF02699 Preprotein translocase subunit CDL62_RS17820 PF13520 Amino acid permease CDL62_RS17830 PF01121 Dephospho-CoA kinase CDL62_RS17835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDL62_RS17835 PF02824 TGS domain CDL62_RS17835 PF03129 Anticodon binding domain CDL62_RS17835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDL62_RS17840 PF05198 Translation initiation factor IF-3, N-terminal domain CDL62_RS17840 PF00707 Translation initiation factor IF-3, C-terminal domain CDL62_RS17845 PF01632 Ribosomal protein L35 CDL62_RS17850 PF00453 Ribosomal protein L20 CDL62_RS17865 PF05173 Dihydrodipicolinate reductase, C-terminus CDL62_RS17865 PF01113 Dihydrodipicolinate reductase, N-terminus CDL62_RS17870 PF10502 Signal peptidase, peptidase S26 CDL62_RS17875 PF10502 Signal peptidase, peptidase S26 CDL62_RS17895 PF02335 Cytochrome c552 CDL62_RS17900 PF01245 Ribosomal protein L19 CDL62_RS17920 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS17920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS17920 PF07689 KaiB domain CDL62_RS17925 PF07995 Glucose / Sorbosone dehydrogenase CDL62_RS17930 PF00593 TonB dependent receptor CDL62_RS17930 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS17935 PF03330 Lytic transglycolase CDL62_RS17935 PF05036 Sporulation related domain CDL62_RS17940 PF02540 NAD synthase CDL62_RS17940 PF00958 GMP synthase C terminal domain CDL62_RS17940 PF00117 Glutamine amidotransferase class-I CDL62_RS17960 PF13460 NAD(P)H-binding CDL62_RS17980 PF12392 Collagenase CDL62_RS17980 PF01136 Peptidase family U32 CDL62_RS17985 PF07715 TonB-dependent Receptor Plug Domain CDL62_RS17985 PF00593 TonB dependent receptor CDL62_RS18010 PF01483 Proprotein convertase P-domain CDL62_RS18025 PF00512 His Kinase A (phospho-acceptor) domain CDL62_RS18025 PF01627 Hpt domain CDL62_RS18025 PF00072 Response regulator receiver domain CDL62_RS18025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDL62_RS18025 PF00672 HAMP domain CDL62_RS18025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDL62_RS18030 PF00375 Sodium:dicarboxylate symporter family CDL62_RS18035 PF01264 Chorismate synthase CDL62_RS18040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDL62_RS18045 PF00106 short chain dehydrogenase CDL62_RS18060 PF04397 LytTr DNA-binding domain CDL62_RS18060 PF00072 Response regulator receiver domain CDL62_RS18065 PF00588 SpoU rRNA Methylase family CDL62_RS18070 PF00216 Bacterial DNA-binding protein CDL62_RS18075 PF03590 Aspartate-ammonia ligase CDL62_RS18080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDL62_RS18080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDL62_RS18090 PF09397 Ftsk gamma domain CDL62_RS18090 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CDL62_RS18090 PF17854 FtsK alpha domain CDL62_RS18090 PF01580 FtsK/SpoIIIE family CDL62_RS18100 PF13593 SBF-like CPA transporter family (DUF4137) CDL62_RS18120 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CDL62_RS18125 PF00682 HMGL-like CDL62_RS18125 PF00364 Biotin-requiring enzyme CDL62_RS18125 PF02436 Conserved carboxylase domain CDL62_RS18135 PF01039 Carboxyl transferase domain CDL62_RS18145 PF00005 ABC transporter CDL62_RS18165 PF00753 Metallo-beta-lactamase superfamily CDL62_RS18165 PF00258 Flavodoxin CDL62_RS18175 PF02618 YceG-like family CDL62_RS18250 PF00270 DEAD/DEAH box helicase CDL62_RS18250 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CDL62_RS18250 PF17191 RecG wedge domain CDL62_RS18255 PF00005 ABC transporter CDL62_RS18260 PF03559 NDP-hexose 2,3-dehydratase CDL62_RS18265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDL62_RS18270 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CDL62_RS18275 PF00132 Bacterial transferase hexapeptide (six repeats) CDL62_RS18275 PF12464 Maltose acetyltransferase CDL62_RS18280 PF00535 Glycosyl transferase family 2 CDL62_RS18290 PF00535 Glycosyl transferase family 2 CDL62_RS18300 PF00535 Glycosyl transferase family 2 CDL62_RS18310 PF00535 Glycosyl transferase family 2 CDL62_RS18310 PF01501 Glycosyl transferase family 8 CDL62_RS18325 PF04480 Protein of unknown function (DUF559) CDL62_RS18355 PF13439 Glycosyltransferase Family 4 CDL62_RS18360 PF13439 Glycosyltransferase Family 4 CDL62_RS18360 PF00534 Glycosyl transferases group 1 CDL62_RS18370 PF13439 Glycosyltransferase Family 4 CDL62_RS18370 PF00534 Glycosyl transferases group 1 CDL62_RS18400 PF13439 Glycosyltransferase Family 4 CDL62_RS18400 PF00534 Glycosyl transferases group 1 CDL62_RS18415 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CDL62_RS18420 PF00255 Glutathione peroxidase CDL62_RS18435 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDL62_RS18435 PF00588 SpoU rRNA Methylase family CDL62_RS18440 PF12848 ABC transporter CDL62_RS18440 PF00005 ABC transporter CDL62_RS18440 PF16326 ABC transporter C-terminal domain CDL62_RS18445 PF05257 CHAP domain CDL62_RS18445 PF01476 LysM domain