CDL62_RS00005 SM00382 ATPases associated with a variety of cellular activities CDL62_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain CDL62_RS00015 SM00646 CDL62_RS00015 CDL62_RS00080 SM00354 helix_turn _helix lactose operon repressor CDL62_RS00090 SM01217 CDL62_RS00090 CDL62_RS00100 SM00758 CDL62_RS00100 CDL62_RS00100 SM01217 CDL62_RS00100 CDL62_RS00105 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS00105 SM00387 Histidine kinase-like ATPases CDL62_RS00105 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS00105 SM00448 cheY-homologous receiver domain CDL62_RS00145 SM00878 Biotin carboxylase C-terminal domain CDL62_RS00250 SM00850 LytTr DNA-binding domain CDL62_RS00265 SM01004 Delta-aminolevulinic acid dehydratase CDL62_RS00285 SM01321 CDL62_RS00285 CDL62_RS00305 SM00387 Histidine kinase-like ATPases CDL62_RS00305 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS00310 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS00340 SM00729 Elongator protein 3, MiaB family, Radical SAM CDL62_RS00375 SM00382 ATPases associated with a variety of cellular activities CDL62_RS00380 SM00382 ATPases associated with a variety of cellular activities CDL62_RS00395 SM00813 Alpha-L-arabinofuranosidase C-terminus CDL62_RS00415 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDL62_RS00420 SM00487 DEAD-like helicases superfamily CDL62_RS00420 SM00490 helicase superfamily c-terminal domain CDL62_RS00465 SM00487 DEAD-like helicases superfamily CDL62_RS00465 SM00490 helicase superfamily c-terminal domain CDL62_RS00535 SM00028 Tetratricopeptide repeats CDL62_RS00540 SM00028 Tetratricopeptide repeats CDL62_RS00550 SM00072 Guanylate kinase homologues. CDL62_RS00570 SM00422 helix_turn_helix, mercury resistance CDL62_RS00585 SM00060 Fibronectin type 3 domain CDL62_RS00600 SM00481 DNA polymerase alpha chain like domain CDL62_RS00605 SM01126 CDL62_RS00605 CDL62_RS00615 SM00900 CDL62_RS00615 CDL62_RS00620 SM00903 Flavin reductase like domain CDL62_RS00650 SM00060 Fibronectin type 3 domain CDL62_RS00650 SM00458 Ricin-type beta-trefoil CDL62_RS00655 SM00710 Parallel beta-helix repeats CDL62_RS00660 SM00421 helix_turn_helix, Lux Regulon CDL62_RS00675 SM00244 prohibitin homologues CDL62_RS00680 SM00244 prohibitin homologues CDL62_RS00700 SM01359 CDL62_RS00700 CDL62_RS00700 SM01360 CDL62_RS00700 CDL62_RS00750 SM00382 ATPases associated with a variety of cellular activities CDL62_RS00790 SM00905 Dihydroneopterin aldolase CDL62_RS00845 SM00387 Histidine kinase-like ATPases CDL62_RS00845 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS00850 SM00316 Ribosomal protein S1-like RNA-binding domain CDL62_RS00850 SM00732 Likely ribonuclease with RNase H fold. CDL62_RS00855 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS00865 SM00487 DEAD-like helicases superfamily CDL62_RS00865 SM00490 helicase superfamily c-terminal domain CDL62_RS00870 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CDL62_RS00875 SM00474 3'-5' exonuclease CDL62_RS00885 SM00487 DEAD-like helicases superfamily CDL62_RS00885 SM00490 helicase superfamily c-terminal domain CDL62_RS00905 SM00347 helix_turn_helix multiple antibiotic resistance protein CDL62_RS00915 SM00382 ATPases associated with a variety of cellular activities CDL62_RS00940 SM00363 S4 RNA-binding domain CDL62_RS00995 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS00995 SM00387 Histidine kinase-like ATPases CDL62_RS00995 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS00995 SM00448 cheY-homologous receiver domain CDL62_RS01010 SM00900 CDL62_RS01010 CDL62_RS01035 SM00487 DEAD-like helicases superfamily CDL62_RS01035 SM00490 helicase superfamily c-terminal domain CDL62_RS01045 SM00382 ATPases associated with a variety of cellular activities CDL62_RS01080 SM00116 Domain in cystathionine beta-synthase and other proteins. CDL62_RS01080 SM01240 CDL62_RS01080 CDL62_RS01125 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDL62_RS01125 SM00866 CDL62_RS01125 CDL62_RS01165 SM00360 RNA recognition motif CDL62_RS01205 SM00354 helix_turn _helix lactose operon repressor CDL62_RS01240 SM01350 CDL62_RS01240 CDL62_RS01260 SM00354 helix_turn _helix lactose operon repressor CDL62_RS01310 SM00729 Elongator protein 3, MiaB family, Radical SAM CDL62_RS01320 SM00387 Histidine kinase-like ATPases CDL62_RS01320 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS01320 SM00448 cheY-homologous receiver domain CDL62_RS01330 SM00382 ATPases associated with a variety of cellular activities CDL62_RS01355 SM00091 PAS domain CDL62_RS01355 SM00138 Methyltransferase, chemotaxis proteins CDL62_RS01375 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS01500 SM00881 CoA binding domain CDL62_RS01505 SM00729 Elongator protein 3, MiaB family, Radical SAM CDL62_RS01505 SM00876 Biotin and Thiamin Synthesis associated domain CDL62_RS01520 SM00729 Elongator protein 3, MiaB family, Radical SAM CDL62_RS01520 SM00876 Biotin and Thiamin Synthesis associated domain CDL62_RS01525 SM00091 PAS domain CDL62_RS01525 SM00387 Histidine kinase-like ATPases CDL62_RS01525 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS01530 SM00855 Phosphoglycerate mutase family CDL62_RS01550 SM00480 DNA polymerase III beta subunit CDL62_RS01575 SM00873 B3/4 domain CDL62_RS01575 SM00874 tRNA synthetase B5 domain CDL62_RS01575 SM00896 Ferredoxin-fold anticodon binding domain CDL62_RS01580 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS01860 SM00487 DEAD-like helicases superfamily CDL62_RS01860 SM00490 helicase superfamily c-terminal domain CDL62_RS01955 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS01955 SM00387 Histidine kinase-like ATPases CDL62_RS01955 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS01955 SM00448 cheY-homologous receiver domain CDL62_RS01970 SM00710 Parallel beta-helix repeats CDL62_RS01975 SM00344 helix_turn_helix ASNC type CDL62_RS02030 SM00977 TilS substrate C-terminal domain CDL62_RS02040 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS02045 SM00710 Parallel beta-helix repeats CDL62_RS02115 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CDL62_RS02130 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CDL62_RS02140 SM01007 Class II Aldolase and Adducin N-terminal domain CDL62_RS02165 SM01007 Class II Aldolase and Adducin N-terminal domain CDL62_RS02175 SM00861 Transketolase, pyrimidine binding domain CDL62_RS02240 SM00450 Rhodanese Homology Domain CDL62_RS02270 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS02270 SM00387 Histidine kinase-like ATPases CDL62_RS02270 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS02270 SM00448 cheY-homologous receiver domain CDL62_RS02290 SM00710 Parallel beta-helix repeats CDL62_RS02300 SM01387 CDL62_RS02300 CDL62_RS02305 SM00316 Ribosomal protein S1-like RNA-binding domain CDL62_RS02305 SM00322 K homology RNA-binding domain CDL62_RS02320 SM00028 Tetratricopeptide repeats CDL62_RS02325 SM00642 Alpha-amylase domain CDL62_RS02345 SM00518 AP endonuclease family 2 CDL62_RS02395 SM00937 CDL62_RS02395 CDL62_RS02400 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CDL62_RS02505 SM00100 Cyclic nucleotide-monophosphate binding domain CDL62_RS02505 SM00419 helix_turn_helix, cAMP Regulatory protein CDL62_RS02510 SM01005 Alanine racemase, C-terminal domain CDL62_RS02550 SM00387 Histidine kinase-like ATPases CDL62_RS02550 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS02620 SM00740 CDL62_RS02620 CDL62_RS02625 SM00363 S4 RNA-binding domain CDL62_RS02660 SM00830 Chorismate mutase type II CDL62_RS02680 SM00062 Bacterial periplasmic substrate-binding proteins CDL62_RS02680 SM00387 Histidine kinase-like ATPases CDL62_RS02680 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS02700 SM00382 ATPases associated with a variety of cellular activities CDL62_RS02705 SM00382 ATPases associated with a variety of cellular activities CDL62_RS02740 SM00946 Prolyl-tRNA synthetase, C-terminal CDL62_RS02765 SM00047 Lysozyme subfamily 2 CDL62_RS02765 SM00257 Lysin motif CDL62_RS02780 SM00387 Histidine kinase-like ATPases CDL62_RS02780 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS02895 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDL62_RS02895 SM00387 Histidine kinase-like ATPases CDL62_RS02895 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS02900 SM00448 cheY-homologous receiver domain CDL62_RS02915 SM00387 Histidine kinase-like ATPases CDL62_RS02915 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS02920 SM00448 cheY-homologous receiver domain CDL62_RS02920 SM00862 Transcriptional regulatory protein, C terminal CDL62_RS02960 SM00116 Domain in cystathionine beta-synthase and other proteins. CDL62_RS02960 SM00924 MgtE intracellular N domain CDL62_RS02980 SM00364 Leucine-rich repeats, bacterial type CDL62_RS02980 SM00369 Leucine-rich repeats, typical (most populated) subfamily CDL62_RS03035 SM00478 endonuclease III CDL62_RS03035 SM00525 CDL62_RS03035 CDL62_RS03045 SM00098 Alkaline phosphatase homologues CDL62_RS03175 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDL62_RS03195 SM00421 helix_turn_helix, Lux Regulon CDL62_RS03195 SM00448 cheY-homologous receiver domain CDL62_RS03215 SM00327 von Willebrand factor (vWF) type A domain CDL62_RS03225 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS03235 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDL62_RS03235 SM00382 ATPases associated with a variety of cellular activities CDL62_RS03295 SM00382 ATPases associated with a variety of cellular activities CDL62_RS03310 SM00938 Nitrogen regulatory protein P-II CDL62_RS03315 SM00938 Nitrogen regulatory protein P-II CDL62_RS03345 SM00729 Elongator protein 3, MiaB family, Radical SAM CDL62_RS03390 SM00382 ATPases associated with a variety of cellular activities CDL62_RS03395 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS03395 SM00871 Bacterial transcription activator, effector binding domain CDL62_RS03410 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDL62_RS03410 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDL62_RS03410 SM00091 PAS domain CDL62_RS03410 SM00387 Histidine kinase-like ATPases CDL62_RS03410 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS03410 SM00448 cheY-homologous receiver domain CDL62_RS03420 SM00833 Cobalamin synthesis protein cobW C-terminal domain CDL62_RS03425 SM00833 Cobalamin synthesis protein cobW C-terminal domain CDL62_RS03430 SM00382 ATPases associated with a variety of cellular activities CDL62_RS03500 SM01130 CDL62_RS03500 CDL62_RS03520 SM00093 SERine Proteinase INhibitors CDL62_RS03525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDL62_RS03525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDL62_RS03545 SM00382 ATPases associated with a variety of cellular activities CDL62_RS03545 SM00448 cheY-homologous receiver domain CDL62_RS03550 SM00387 Histidine kinase-like ATPases CDL62_RS03550 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS03550 SM00448 cheY-homologous receiver domain CDL62_RS03680 SM00858 CDL62_RS03680 CDL62_RS03740 SM00382 ATPases associated with a variety of cellular activities CDL62_RS03785 SM00732 Likely ribonuclease with RNase H fold. CDL62_RS03800 SM00357 Cold shock protein domain CDL62_RS03800 SM00382 ATPases associated with a variety of cellular activities CDL62_RS03800 SM00959 Rho termination factor, N-terminal domain CDL62_RS03835 SM00387 Histidine kinase-like ATPases CDL62_RS03835 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS03840 SM00448 cheY-homologous receiver domain CDL62_RS03845 SM00138 Methyltransferase, chemotaxis proteins CDL62_RS03850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDL62_RS03850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDL62_RS03855 SM00260 Two component signalling adaptor domain CDL62_RS03860 SM00073 Histidine Phosphotransfer domain CDL62_RS03860 SM00260 Two component signalling adaptor domain CDL62_RS03860 SM00387 Histidine kinase-like ATPases CDL62_RS03860 SM01231 CDL62_RS03860 CDL62_RS03865 SM00448 cheY-homologous receiver domain CDL62_RS03870 SM00387 Histidine kinase-like ATPases CDL62_RS03870 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS03870 SM00448 cheY-homologous receiver domain CDL62_RS03875 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDL62_RS03875 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDL62_RS03875 SM00091 PAS domain CDL62_RS03875 SM00387 Histidine kinase-like ATPases CDL62_RS03875 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS03875 SM00448 cheY-homologous receiver domain CDL62_RS03880 SM00100 Cyclic nucleotide-monophosphate binding domain CDL62_RS03880 SM00419 helix_turn_helix, cAMP Regulatory protein CDL62_RS03905 SM00850 LytTr DNA-binding domain CDL62_RS03915 SM00060 Fibronectin type 3 domain CDL62_RS03920 SM00463 Small MutS-related domain CDL62_RS03920 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CDL62_RS03920 SM00534 ATPase domain of DNA mismatch repair MUTS family CDL62_RS04025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDL62_RS04030 SM00363 S4 RNA-binding domain CDL62_RS04050 SM00382 ATPases associated with a variety of cellular activities CDL62_RS04070 SM00534 ATPase domain of DNA mismatch repair MUTS family CDL62_RS04120 SM00487 DEAD-like helicases superfamily CDL62_RS04120 SM00490 helicase superfamily c-terminal domain CDL62_RS04120 SM00982 CDL62_RS04120 CDL62_RS04120 SM01058 CarD-like/TRCF domain CDL62_RS04125 SM00091 PAS domain CDL62_RS04125 SM00448 cheY-homologous receiver domain CDL62_RS04140 SM00028 Tetratricopeptide repeats CDL62_RS04150 SM01091 Transporter associated domain CDL62_RS04165 SM00864 Tubulin/FtsZ family, GTPase domain CDL62_RS04165 SM00865 Tubulin/FtsZ family, C-terminal domain CDL62_RS04170 SM00842 Cell division protein FtsA CDL62_RS04210 SM00740 CDL62_RS04210 CDL62_RS04230 SM00563 Phosphate acyltransferases CDL62_RS04300 SM00341 Helicase and RNase D C-terminal CDL62_RS04300 SM00382 ATPases associated with a variety of cellular activities CDL62_RS04345 SM00729 Elongator protein 3, MiaB family, Radical SAM CDL62_RS04370 SM00028 Tetratricopeptide repeats CDL62_RS04385 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CDL62_RS04425 SM00382 ATPases associated with a variety of cellular activities CDL62_RS04445 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDL62_RS04445 SM00448 cheY-homologous receiver domain CDL62_RS04455 SM00382 ATPases associated with a variety of cellular activities CDL62_RS04480 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS04480 SM00448 cheY-homologous receiver domain CDL62_RS04485 SM00331 Sigma factor PP2C-like phosphatases CDL62_RS04495 SM01192 CDL62_RS04495 CDL62_RS04495 SM01193 CDL62_RS04495 CDL62_RS04505 SM00662 RNA polymerases D CDL62_RS04510 SM00363 S4 RNA-binding domain CDL62_RS04510 SM01390 CDL62_RS04510 CDL62_RS04530 SM00316 Ribosomal protein S1-like RNA-binding domain CDL62_RS04585 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CDL62_RS04590 SM01374 CDL62_RS04590 CDL62_RS04610 SM00322 K homology RNA-binding domain CDL62_RS04625 SM01382 CDL62_RS04625 CDL62_RS04625 SM01383 CDL62_RS04625 CDL62_RS04645 SM01403 CDL62_RS04645 CDL62_RS04650 SM00838 Elongation factor G C-terminus CDL62_RS04650 SM00889 Elongation factor G, domain IV CDL62_RS04665 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CDL62_RS04785 SM01321 CDL62_RS04785 CDL62_RS04810 SM00028 Tetratricopeptide repeats CDL62_RS04810 SM00387 Histidine kinase-like ATPases CDL62_RS04810 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS04835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDL62_RS04835 SM00387 Histidine kinase-like ATPases CDL62_RS04835 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS04845 SM00421 helix_turn_helix, Lux Regulon CDL62_RS04895 SM00935 Outer membrane protein (OmpH-like) CDL62_RS04900 SM00935 Outer membrane protein (OmpH-like) CDL62_RS04905 SM00935 Outer membrane protein (OmpH-like) CDL62_RS04990 SM00062 Bacterial periplasmic substrate-binding proteins CDL62_RS05010 SM00838 Elongation factor G C-terminus CDL62_RS05010 SM00889 Elongation factor G, domain IV CDL62_RS05050 SM01217 CDL62_RS05050 CDL62_RS05055 SM00606 Cellulose Binding Domain Type IV CDL62_RS05080 SM00421 helix_turn_helix, Lux Regulon CDL62_RS05110 SM00245 tail specific protease CDL62_RS05180 SM00271 DnaJ molecular chaperone homology domain CDL62_RS05225 SM00886 Stress responsive A/B Barrel Domain CDL62_RS05250 SM01400 CDL62_RS05250 CDL62_RS05265 SM00363 S4 RNA-binding domain CDL62_RS05280 SM00450 Rhodanese Homology Domain CDL62_RS05325 SM00421 helix_turn_helix, Lux Regulon CDL62_RS05325 SM00448 cheY-homologous receiver domain CDL62_RS05330 SM00028 Tetratricopeptide repeats CDL62_RS05330 SM00387 Histidine kinase-like ATPases CDL62_RS05330 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS05365 SM00116 Domain in cystathionine beta-synthase and other proteins. CDL62_RS05365 SM01091 Transporter associated domain CDL62_RS05375 SM00478 endonuclease III CDL62_RS05375 SM00525 CDL62_RS05375 CDL62_RS05380 SM00411 bacterial (prokaryotic) histone like domain CDL62_RS05385 SM00316 Ribosomal protein S1-like RNA-binding domain CDL62_RS05395 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDL62_RS05410 SM00382 ATPases associated with a variety of cellular activities CDL62_RS05425 SM00382 ATPases associated with a variety of cellular activities CDL62_RS05425 SM00448 cheY-homologous receiver domain CDL62_RS05490 SM00458 Ricin-type beta-trefoil CDL62_RS05560 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CDL62_RS05595 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CDL62_RS05615 SM00859 Semialdehyde dehydrogenase, NAD binding domain CDL62_RS05635 SM00851 MGS-like domain CDL62_RS05635 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDL62_RS05650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDL62_RS05650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDL62_RS05650 SM01049 CDL62_RS05650 CDL62_RS05695 SM00758 CDL62_RS05695 CDL62_RS05830 SM00382 ATPases associated with a variety of cellular activities CDL62_RS05870 SM00331 Sigma factor PP2C-like phosphatases CDL62_RS05895 SM00155 Phospholipase D. Active site motifs. CDL62_RS05925 SM01038 Beta galactosidase small chain CDL62_RS05950 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS05975 SM00858 CDL62_RS05975 CDL62_RS05995 SM01038 Beta galactosidase small chain CDL62_RS06045 SM00382 ATPases associated with a variety of cellular activities CDL62_RS06045 SM00994 ClpX C4-type zinc finger CDL62_RS06045 SM01086 C-terminal, D2-small domain, of ClpB protein CDL62_RS06065 SM00382 ATPases associated with a variety of cellular activities CDL62_RS06075 SM00341 Helicase and RNase D C-terminal CDL62_RS06075 SM00487 DEAD-like helicases superfamily CDL62_RS06075 SM00490 helicase superfamily c-terminal domain CDL62_RS06075 SM00956 CDL62_RS06075 CDL62_RS06105 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS06105 SM00387 Histidine kinase-like ATPases CDL62_RS06105 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS06105 SM00448 cheY-homologous receiver domain CDL62_RS06165 SM01038 Beta galactosidase small chain CDL62_RS06175 SM00606 Cellulose Binding Domain Type IV CDL62_RS06180 SM00606 Cellulose Binding Domain Type IV CDL62_RS06275 SM00813 Alpha-L-arabinofuranosidase C-terminus CDL62_RS06285 SM00606 Cellulose Binding Domain Type IV CDL62_RS06300 SM00633 Glycosyl hydrolase family 10 CDL62_RS06305 SM00758 CDL62_RS06305 CDL62_RS06305 SM01217 CDL62_RS06305 CDL62_RS06330 SM01038 Beta galactosidase small chain CDL62_RS06340 SM00606 Cellulose Binding Domain Type IV CDL62_RS06345 SM00829 Enoylreductase CDL62_RS06370 SM00354 helix_turn _helix lactose operon repressor CDL62_RS06395 SM00458 Ricin-type beta-trefoil CDL62_RS06400 SM00633 Glycosyl hydrolase family 10 CDL62_RS06430 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS06430 SM00387 Histidine kinase-like ATPases CDL62_RS06430 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS06430 SM00448 cheY-homologous receiver domain CDL62_RS06435 SM00387 Histidine kinase-like ATPases CDL62_RS06435 SM00433 TopoisomeraseII CDL62_RS06440 SM00434 DNA Topoisomerase IV CDL62_RS06470 SM01007 Class II Aldolase and Adducin N-terminal domain CDL62_RS06495 SM00382 ATPases associated with a variety of cellular activities CDL62_RS06495 SM00464 Found in ATP-dependent protease La (LON) CDL62_RS06520 SM00028 Tetratricopeptide repeats CDL62_RS06525 SM00937 CDL62_RS06525 CDL62_RS06535 SM00904 Riboflavin kinase CDL62_RS06540 SM00996 S-adenosyl-L-homocysteine hydrolase CDL62_RS06540 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CDL62_RS06690 SM00382 ATPases associated with a variety of cellular activities CDL62_RS06715 SM00798 AICARFT/IMPCHase bienzyme CDL62_RS06715 SM00851 MGS-like domain CDL62_RS06755 SM00382 ATPases associated with a variety of cellular activities CDL62_RS06770 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS06775 SM01018 B12 binding domain CDL62_RS06785 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain CDL62_RS06835 SM00382 ATPases associated with a variety of cellular activities CDL62_RS06870 SM00257 Lysin motif CDL62_RS06880 SM00470 ParB-like nuclease domain CDL62_RS06915 SM00382 ATPases associated with a variety of cellular activities CDL62_RS06940 SM00729 Elongator protein 3, MiaB family, Radical SAM CDL62_RS06945 SM00710 Parallel beta-helix repeats CDL62_RS06990 SM00853 MutL C terminal dimerisation domain CDL62_RS06990 SM01340 CDL62_RS06990 CDL62_RS07050 SM00100 Cyclic nucleotide-monophosphate binding domain CDL62_RS07050 SM00419 helix_turn_helix, cAMP Regulatory protein CDL62_RS07060 SM01001 AIR carboxylase CDL62_RS07100 SM00382 ATPases associated with a variety of cellular activities CDL62_RS07115 SM00387 Histidine kinase-like ATPases CDL62_RS07115 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS07120 SM00448 cheY-homologous receiver domain CDL62_RS07120 SM00862 Transcriptional regulatory protein, C terminal CDL62_RS07130 SM00382 ATPases associated with a variety of cellular activities CDL62_RS07215 SM00861 Transketolase, pyrimidine binding domain CDL62_RS07235 SM00487 DEAD-like helicases superfamily CDL62_RS07235 SM00490 helicase superfamily c-terminal domain CDL62_RS07250 SM00116 Domain in cystathionine beta-synthase and other proteins. CDL62_RS07250 SM00924 MgtE intracellular N domain CDL62_RS07255 SM00650 Ribosomal RNA adenine dimethylases CDL62_RS07285 SM00481 DNA polymerase alpha chain like domain CDL62_RS07355 SM01329 CDL62_RS07355 CDL62_RS07360 SM00917 LeuA allosteric (dimerisation) domain CDL62_RS07375 SM00917 LeuA allosteric (dimerisation) domain CDL62_RS07410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDL62_RS07425 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDL62_RS07435 SM00382 ATPases associated with a variety of cellular activities CDL62_RS07470 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS07500 SM00400 zinc finger CDL62_RS07500 SM00493 CDL62_RS07500 CDL62_RS07595 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDL62_RS07665 SM00382 ATPases associated with a variety of cellular activities CDL62_RS07690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDL62_RS07690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDL62_RS07700 SM00448 cheY-homologous receiver domain CDL62_RS07710 SM00073 Histidine Phosphotransfer domain CDL62_RS07710 SM00260 Two component signalling adaptor domain CDL62_RS07710 SM00387 Histidine kinase-like ATPases CDL62_RS07710 SM01231 CDL62_RS07710 CDL62_RS07715 SM00260 Two component signalling adaptor domain CDL62_RS07720 SM00260 Two component signalling adaptor domain CDL62_RS07725 SM00138 Methyltransferase, chemotaxis proteins CDL62_RS07730 SM00387 Histidine kinase-like ATPases CDL62_RS07740 SM00448 cheY-homologous receiver domain CDL62_RS07745 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDL62_RS07745 SM00091 PAS domain CDL62_RS07750 SM00138 Methyltransferase, chemotaxis proteins CDL62_RS07755 SM00138 Methyltransferase, chemotaxis proteins CDL62_RS07770 SM00091 PAS domain CDL62_RS07770 SM00331 Sigma factor PP2C-like phosphatases CDL62_RS07785 SM00382 ATPases associated with a variety of cellular activities CDL62_RS07805 SM00450 Rhodanese Homology Domain CDL62_RS07810 SM00729 Elongator protein 3, MiaB family, Radical SAM CDL62_RS07840 SM00448 cheY-homologous receiver domain CDL62_RS07845 SM00382 ATPases associated with a variety of cellular activities CDL62_RS07860 SM00028 Tetratricopeptide repeats CDL62_RS07885 SM01228 CDL62_RS07885 CDL62_RS07895 SM00465 GIY-YIG type nucleases (URI domain) CDL62_RS07915 SM01133 CDL62_RS07915 CDL62_RS07930 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDL62_RS07960 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CDL62_RS07960 SM00474 3'-5' exonuclease CDL62_RS07960 SM00475 5'-3' exonuclease CDL62_RS07960 SM00482 DNA polymerase A domain CDL62_RS08015 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDL62_RS08015 SM00245 tail specific protease CDL62_RS08030 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDL62_RS08030 SM00245 tail specific protease CDL62_RS08105 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDL62_RS08105 SM00091 PAS domain CDL62_RS08105 SM00387 Histidine kinase-like ATPases CDL62_RS08105 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS08150 SM01321 CDL62_RS08150 CDL62_RS08200 SM01234 CDL62_RS08200 CDL62_RS08215 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDL62_RS08215 SM00091 PAS domain CDL62_RS08215 SM00387 Histidine kinase-like ATPases CDL62_RS08215 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS08230 SM00387 Histidine kinase-like ATPases CDL62_RS08230 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS08305 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDL62_RS08330 SM00450 Rhodanese Homology Domain CDL62_RS08385 SM00829 Enoylreductase CDL62_RS08390 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS08465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDL62_RS08495 SM00387 Histidine kinase-like ATPases CDL62_RS08495 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS08495 SM00448 cheY-homologous receiver domain CDL62_RS08500 SM00331 Sigma factor PP2C-like phosphatases CDL62_RS08505 SM00841 Elongation factor P, C-terminal CDL62_RS08505 SM01185 CDL62_RS08505 CDL62_RS08575 SM00382 ATPases associated with a variety of cellular activities CDL62_RS08580 SM00656 CDL62_RS08580 CDL62_RS08635 SM00729 Elongator protein 3, MiaB family, Radical SAM CDL62_RS08655 SM00062 Bacterial periplasmic substrate-binding proteins CDL62_RS08655 SM00387 Histidine kinase-like ATPases CDL62_RS08655 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS08670 SM00382 ATPases associated with a variety of cellular activities CDL62_RS08740 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDL62_RS08740 SM00091 PAS domain CDL62_RS08740 SM00387 Histidine kinase-like ATPases CDL62_RS08740 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS08740 SM00448 cheY-homologous receiver domain CDL62_RS08750 SM01209 CDL62_RS08750 CDL62_RS08750 SM01210 CDL62_RS08750 CDL62_RS08775 SM00487 DEAD-like helicases superfamily CDL62_RS08775 SM00490 helicase superfamily c-terminal domain CDL62_RS08795 SM01001 AIR carboxylase CDL62_RS08800 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDL62_RS08805 SM00226 Low molecular weight phosphatase family CDL62_RS08850 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDL62_RS08870 SM00100 Cyclic nucleotide-monophosphate binding domain CDL62_RS08870 SM00387 Histidine kinase-like ATPases CDL62_RS08875 SM00448 cheY-homologous receiver domain CDL62_RS08980 SM00984 UDP binding domain CDL62_RS09040 SM00091 PAS domain CDL62_RS09040 SM00387 Histidine kinase-like ATPases CDL62_RS09040 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS09110 SM00014 Acid phosphatase homologues CDL62_RS09115 SM00091 PAS domain CDL62_RS09115 SM00387 Histidine kinase-like ATPases CDL62_RS09115 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS09150 SM00448 cheY-homologous receiver domain CDL62_RS09150 SM00850 LytTr DNA-binding domain CDL62_RS09155 SM00028 Tetratricopeptide repeats CDL62_RS09210 SM00382 ATPases associated with a variety of cellular activities CDL62_RS09225 SM00382 ATPases associated with a variety of cellular activities CDL62_RS09285 SM00448 cheY-homologous receiver domain CDL62_RS09285 SM00862 Transcriptional regulatory protein, C terminal CDL62_RS09290 SM00387 Histidine kinase-like ATPases CDL62_RS09290 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS09300 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDL62_RS09300 SM00091 PAS domain CDL62_RS09355 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDL62_RS09365 SM00859 Semialdehyde dehydrogenase, NAD binding domain CDL62_RS09375 SM00606 Cellulose Binding Domain Type IV CDL62_RS09400 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CDL62_RS09405 SM00198 SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. CDL62_RS09435 SM00861 Transketolase, pyrimidine binding domain CDL62_RS09440 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDL62_RS09440 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDL62_RS09440 SM00091 PAS domain CDL62_RS09440 SM00387 Histidine kinase-like ATPases CDL62_RS09440 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS09450 SM00382 ATPases associated with a variety of cellular activities CDL62_RS09515 SM00028 Tetratricopeptide repeats CDL62_RS09535 SM00479 CDL62_RS09535 CDL62_RS09565 SM00587 ZnF_C4 abd HLH domain containing kinases domain CDL62_RS09600 SM00851 MGS-like domain CDL62_RS09600 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDL62_RS09670 SM00710 Parallel beta-helix repeats CDL62_RS09695 SM00387 Histidine kinase-like ATPases CDL62_RS09700 SM00091 PAS domain CDL62_RS09700 SM00387 Histidine kinase-like ATPases CDL62_RS09700 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS09700 SM00448 cheY-homologous receiver domain CDL62_RS09710 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CDL62_RS09710 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CDL62_RS09710 SM00493 CDL62_RS09710 CDL62_RS09755 SM00382 ATPases associated with a variety of cellular activities CDL62_RS09760 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDL62_RS09790 SM00758 CDL62_RS09790 CDL62_RS09835 SM00984 UDP binding domain CDL62_RS09950 SM00448 cheY-homologous receiver domain CDL62_RS09950 SM00850 LytTr DNA-binding domain CDL62_RS09995 SM00028 Tetratricopeptide repeats CDL62_RS10000 SM01217 CDL62_RS10000 CDL62_RS10005 SM01217 CDL62_RS10005 CDL62_RS10025 SM00448 cheY-homologous receiver domain CDL62_RS10025 SM00850 LytTr DNA-binding domain CDL62_RS10060 SM00840 CDL62_RS10060 CDL62_RS10075 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDL62_RS10075 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDL62_RS10075 SM00091 PAS domain CDL62_RS10075 SM00387 Histidine kinase-like ATPases CDL62_RS10075 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS10075 SM00448 cheY-homologous receiver domain CDL62_RS10080 SM00387 Histidine kinase-like ATPases CDL62_RS10080 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS10080 SM00448 cheY-homologous receiver domain CDL62_RS10095 SM00316 Ribosomal protein S1-like RNA-binding domain CDL62_RS10095 SM00357 Cold shock protein domain CDL62_RS10095 SM00955 CDL62_RS10095 CDL62_RS10150 SM00905 Dihydroneopterin aldolase CDL62_RS10190 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CDL62_RS10190 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CDL62_RS10200 SM00448 cheY-homologous receiver domain CDL62_RS10215 SM00382 ATPases associated with a variety of cellular activities CDL62_RS10215 SM00448 cheY-homologous receiver domain CDL62_RS10230 SM00642 Alpha-amylase domain CDL62_RS10290 SM00382 ATPases associated with a variety of cellular activities CDL62_RS10310 SM00642 Alpha-amylase domain CDL62_RS10320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDL62_RS10360 SM00257 Lysin motif CDL62_RS10425 SM00487 DEAD-like helicases superfamily CDL62_RS10425 SM00490 helicase superfamily c-terminal domain CDL62_RS10430 SM01321 CDL62_RS10430 CDL62_RS10465 SM00316 Ribosomal protein S1-like RNA-binding domain CDL62_RS10490 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CDL62_RS10500 SM00382 ATPases associated with a variety of cellular activities CDL62_RS10520 SM00883 Chaperonin 10 Kd subunit CDL62_RS10600 SM00870 CDL62_RS10600 CDL62_RS10610 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDL62_RS10625 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CDL62_RS10640 SM00357 Cold shock protein domain CDL62_RS10655 SM00382 ATPases associated with a variety of cellular activities CDL62_RS10680 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CDL62_RS10705 SM00382 ATPases associated with a variety of cellular activities CDL62_RS10765 SM00855 Phosphoglycerate mutase family CDL62_RS10770 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDL62_RS10770 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDL62_RS10770 SM00091 PAS domain CDL62_RS10770 SM00387 Histidine kinase-like ATPases CDL62_RS10770 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS10775 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CDL62_RS10775 SM00710 Parallel beta-helix repeats CDL62_RS10795 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDL62_RS10795 SM00091 PAS domain CDL62_RS10795 SM00387 Histidine kinase-like ATPases CDL62_RS10795 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS10795 SM00448 cheY-homologous receiver domain CDL62_RS10795 SM01079 CDL62_RS10795 CDL62_RS10855 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDL62_RS10855 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDL62_RS10855 SM00091 PAS domain CDL62_RS10870 SM00710 Parallel beta-helix repeats CDL62_RS10910 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS10965 SM00825 Beta-ketoacyl synthase CDL62_RS10970 SM00358 Double-stranded RNA binding motif CDL62_RS10970 SM00535 Ribonuclease III family CDL62_RS10975 SM00387 Histidine kinase-like ATPases CDL62_RS10975 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS10980 SM00448 cheY-homologous receiver domain CDL62_RS10980 SM00862 Transcriptional regulatory protein, C terminal CDL62_RS10990 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CDL62_RS11000 SM00935 Outer membrane protein (OmpH-like) CDL62_RS11040 SM00900 CDL62_RS11040 CDL62_RS11065 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CDL62_RS11080 SM00493 CDL62_RS11080 CDL62_RS11120 SM00422 helix_turn_helix, mercury resistance CDL62_RS11125 SM00854 Bacterial capsule synthesis protein PGA_cap CDL62_RS11155 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CDL62_RS11155 SM00534 ATPase domain of DNA mismatch repair MUTS family CDL62_RS11170 SM00382 ATPases associated with a variety of cellular activities CDL62_RS11195 SM00382 ATPases associated with a variety of cellular activities CDL62_RS11200 SM00382 ATPases associated with a variety of cellular activities CDL62_RS11200 SM00448 cheY-homologous receiver domain CDL62_RS11205 SM00387 Histidine kinase-like ATPases CDL62_RS11210 SM00881 CoA binding domain CDL62_RS11230 SM00670 Large family of predicted nucleotide-binding domains CDL62_RS11280 SM00357 Cold shock protein domain CDL62_RS11325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDL62_RS11360 SM01230 CDL62_RS11360 CDL62_RS11370 SM00710 Parallel beta-helix repeats CDL62_RS11375 SM00409 Immunoglobulin CDL62_RS11380 SM00710 Parallel beta-helix repeats CDL62_RS11390 SM00062 Bacterial periplasmic substrate-binding proteins CDL62_RS11390 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDL62_RS11390 SM00091 PAS domain CDL62_RS11390 SM00387 Histidine kinase-like ATPases CDL62_RS11390 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS11395 SM00642 Alpha-amylase domain CDL62_RS11405 SM00642 Alpha-amylase domain CDL62_RS11425 SM00354 helix_turn _helix lactose operon repressor CDL62_RS11445 SM00642 Alpha-amylase domain CDL62_RS11460 SM00849 Metallo-beta-lactamase superfamily CDL62_RS11480 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS11480 SM00387 Histidine kinase-like ATPases CDL62_RS11480 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS11480 SM00448 cheY-homologous receiver domain CDL62_RS11490 SM00448 cheY-homologous receiver domain CDL62_RS11490 SM00850 LytTr DNA-binding domain CDL62_RS11515 SM00642 Alpha-amylase domain CDL62_RS11525 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDL62_RS11530 SM00902 Iron hydrogenase small subunit CDL62_RS11530 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDL62_RS11575 SM00481 DNA polymerase alpha chain like domain CDL62_RS11580 SM00387 Histidine kinase-like ATPases CDL62_RS11590 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDL62_RS11595 SM00902 Iron hydrogenase small subunit CDL62_RS11595 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDL62_RS11675 SM00714 Possible membrane-associated motif in LPS-induced tumor necrosis factor alpha factor (LITAF), also known as PIG7, and other animal proteins. CDL62_RS11710 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS11720 SM00387 Histidine kinase-like ATPases CDL62_RS11745 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS11755 SM01126 CDL62_RS11755 CDL62_RS11765 SM00028 Tetratricopeptide repeats CDL62_RS11795 SM00060 Fibronectin type 3 domain CDL62_RS11795 SM00560 LamG-like jellyroll fold domain CDL62_RS11795 SM00710 Parallel beta-helix repeats CDL62_RS11810 SM00861 Transketolase, pyrimidine binding domain CDL62_RS11815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDL62_RS11815 SM00387 Histidine kinase-like ATPases CDL62_RS11815 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS11820 SM00448 cheY-homologous receiver domain CDL62_RS11820 SM00862 Transcriptional regulatory protein, C terminal CDL62_RS11920 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CDL62_RS11920 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CDL62_RS11925 SM00649 Ribosomal protein L11/L12 CDL62_RS11950 SM00663 RNA polymerase I subunit A N-terminus CDL62_RS11965 SM00656 CDL62_RS11965 CDL62_RS11965 SM00710 Parallel beta-helix repeats CDL62_RS11975 SM00487 DEAD-like helicases superfamily CDL62_RS11975 SM00490 helicase superfamily c-terminal domain CDL62_RS11975 SM00847 Helicase associated domain (HA2) Add an annotation CDL62_RS11980 SM00448 cheY-homologous receiver domain CDL62_RS11980 SM00850 LytTr DNA-binding domain CDL62_RS12025 SM00448 cheY-homologous receiver domain CDL62_RS12025 SM00850 LytTr DNA-binding domain CDL62_RS12030 SM00448 cheY-homologous receiver domain CDL62_RS12030 SM00850 LytTr DNA-binding domain CDL62_RS12050 SM00642 Alpha-amylase domain CDL62_RS12145 SM00382 ATPases associated with a variety of cellular activities CDL62_RS12160 SM00448 cheY-homologous receiver domain CDL62_RS12160 SM00850 LytTr DNA-binding domain CDL62_RS12225 SM00563 Phosphate acyltransferases CDL62_RS12260 SM00382 ATPases associated with a variety of cellular activities CDL62_RS12275 SM00060 Fibronectin type 3 domain CDL62_RS12300 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CDL62_RS12370 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDL62_RS12370 SM00091 PAS domain CDL62_RS12370 SM00387 Histidine kinase-like ATPases CDL62_RS12370 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS12370 SM00448 cheY-homologous receiver domain CDL62_RS12405 SM00046 Diacylglycerol kinase catalytic domain (presumed) CDL62_RS12525 SM00382 ATPases associated with a variety of cellular activities CDL62_RS12540 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS12555 SM00382 ATPases associated with a variety of cellular activities CDL62_RS12635 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDL62_RS12650 SM00220 Serine/Threonine protein kinases, catalytic domain CDL62_RS12660 SM00560 LamG-like jellyroll fold domain CDL62_RS12665 SM00116 Domain in cystathionine beta-synthase and other proteins. CDL62_RS12670 SM00883 Chaperonin 10 Kd subunit CDL62_RS12700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDL62_RS12700 SM00954 Region found in RelA / SpoT proteins CDL62_RS12710 SM00788 Adenylosuccinate synthetase CDL62_RS12930 SM00656 CDL62_RS12930 CDL62_RS12935 SM00710 Parallel beta-helix repeats CDL62_RS13035 SM00876 Biotin and Thiamin Synthesis associated domain CDL62_RS13065 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CDL62_RS13080 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS13130 SM00382 ATPases associated with a variety of cellular activities CDL62_RS13215 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDL62_RS13215 SM00245 tail specific protease CDL62_RS13255 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS13320 SM01321 CDL62_RS13320 CDL62_RS13420 SM00861 Transketolase, pyrimidine binding domain CDL62_RS13450 SM00028 Tetratricopeptide repeats CDL62_RS13465 SM00448 cheY-homologous receiver domain CDL62_RS13470 SM00387 Histidine kinase-like ATPases CDL62_RS13470 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS13470 SM00448 cheY-homologous receiver domain CDL62_RS13495 SM01409 CDL62_RS13495 CDL62_RS13530 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDL62_RS13530 SM00387 Histidine kinase-like ATPases CDL62_RS13540 SM00890 Domain of unknown function CDL62_RS13610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDL62_RS13610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDL62_RS13625 SM00226 Low molecular weight phosphatase family CDL62_RS13640 SM01068 Putative carbohydrate binding domain CDL62_RS13655 SM00387 Histidine kinase-like ATPases CDL62_RS13655 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS13670 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS13670 SM00387 Histidine kinase-like ATPases CDL62_RS13670 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS13670 SM00448 cheY-homologous receiver domain CDL62_RS13685 SM01038 Beta galactosidase small chain CDL62_RS13690 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS13690 SM00387 Histidine kinase-like ATPases CDL62_RS13690 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS13690 SM00448 cheY-homologous receiver domain CDL62_RS13730 SM01359 CDL62_RS13730 CDL62_RS13730 SM01360 CDL62_RS13730 CDL62_RS13745 SM00642 Alpha-amylase domain CDL62_RS13750 SM00642 Alpha-amylase domain CDL62_RS13755 SM00642 Alpha-amylase domain CDL62_RS13770 SM00448 cheY-homologous receiver domain CDL62_RS13775 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDL62_RS13775 SM00091 PAS domain CDL62_RS13775 SM00387 Histidine kinase-like ATPases CDL62_RS13775 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS13780 SM00091 PAS domain CDL62_RS13780 SM00387 Histidine kinase-like ATPases CDL62_RS13780 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS13780 SM00448 cheY-homologous receiver domain CDL62_RS13785 SM00382 ATPases associated with a variety of cellular activities CDL62_RS13790 SM00062 Bacterial periplasmic substrate-binding proteins CDL62_RS13790 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDL62_RS13790 SM00091 PAS domain CDL62_RS13790 SM00387 Histidine kinase-like ATPases CDL62_RS13790 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS13790 SM00448 cheY-homologous receiver domain CDL62_RS13805 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CDL62_RS13840 SM00448 cheY-homologous receiver domain CDL62_RS13840 SM00850 LytTr DNA-binding domain CDL62_RS13850 SM00850 LytTr DNA-binding domain CDL62_RS13855 SM00420 helix_turn_helix, Deoxyribose operon repressor CDL62_RS13855 SM01134 CDL62_RS13855 CDL62_RS13880 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDL62_RS13935 SM00873 B3/4 domain CDL62_RS13940 SM00849 Metallo-beta-lactamase superfamily CDL62_RS13945 SM00347 helix_turn_helix multiple antibiotic resistance protein CDL62_RS14060 SM00382 ATPases associated with a variety of cellular activities CDL62_RS14080 SM00986 Uracil DNA glycosylase superfamily CDL62_RS14080 SM00987 UreE urease accessory protein, C-terminal domain CDL62_RS14085 SM00342 helix_turn_helix, arabinose operon control protein CDL62_RS14085 SM00387 Histidine kinase-like ATPases CDL62_RS14085 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS14085 SM00448 cheY-homologous receiver domain CDL62_RS14145 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDL62_RS14155 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CDL62_RS14160 SM00387 Histidine kinase-like ATPases CDL62_RS14160 SM00433 TopoisomeraseII CDL62_RS14175 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDL62_RS14190 SM00487 DEAD-like helicases superfamily CDL62_RS14190 SM00490 helicase superfamily c-terminal domain CDL62_RS14205 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDL62_RS14215 SM01211 CDL62_RS14215 CDL62_RS14270 SM00014 Acid phosphatase homologues CDL62_RS14275 SM00479 CDL62_RS14275 CDL62_RS14305 SM00563 Phosphate acyltransferases CDL62_RS14375 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS14385 SM00893 Electron transfer flavoprotein domain CDL62_RS14390 SM00893 Electron transfer flavoprotein domain CDL62_RS14415 SM00382 ATPases associated with a variety of cellular activities CDL62_RS14500 SM00487 DEAD-like helicases superfamily CDL62_RS14500 SM00490 helicase superfamily c-terminal domain CDL62_RS14555 SM00382 ATPases associated with a variety of cellular activities CDL62_RS14590 SM00382 ATPases associated with a variety of cellular activities CDL62_RS14625 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS14690 SM00382 ATPases associated with a variety of cellular activities CDL62_RS14715 SM00387 Histidine kinase-like ATPases CDL62_RS14805 SM00382 ATPases associated with a variety of cellular activities CDL62_RS14820 SM00966 SpoVT / AbrB like domain CDL62_RS14880 SM00382 ATPases associated with a variety of cellular activities CDL62_RS14935 SM00220 Serine/Threonine protein kinases, catalytic domain CDL62_RS14970 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS15070 SM00382 ATPases associated with a variety of cellular activities CDL62_RS15145 SM00487 DEAD-like helicases superfamily CDL62_RS15170 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS15180 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS15190 SM01252 CDL62_RS15190 CDL62_RS15310 SM00487 DEAD-like helicases superfamily CDL62_RS15335 SM00670 Large family of predicted nucleotide-binding domains CDL62_RS15370 SM00382 ATPases associated with a variety of cellular activities CDL62_RS15440 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS15485 SM01252 CDL62_RS15485 CDL62_RS15500 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS15520 SM00220 Serine/Threonine protein kinases, catalytic domain CDL62_RS15585 SM00382 ATPases associated with a variety of cellular activities CDL62_RS15670 SM00490 helicase superfamily c-terminal domain CDL62_RS15790 SM00670 Large family of predicted nucleotide-binding domains CDL62_RS15845 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CDL62_RS15850 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CDL62_RS15855 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CDL62_RS15860 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CDL62_RS15870 SM00710 Parallel beta-helix repeats CDL62_RS15895 SM00382 ATPases associated with a variety of cellular activities CDL62_RS15915 SM00382 ATPases associated with a variety of cellular activities CDL62_RS15915 SM00448 cheY-homologous receiver domain CDL62_RS15920 SM00387 Histidine kinase-like ATPases CDL62_RS15925 SM00028 Tetratricopeptide repeats CDL62_RS15925 SM00287 Bacterial SH3 domain homologues CDL62_RS15935 SM00028 Tetratricopeptide repeats CDL62_RS15940 SM00327 von Willebrand factor (vWF) type A domain CDL62_RS15945 SM00327 von Willebrand factor (vWF) type A domain CDL62_RS16045 SM00408 Immunoglobulin C-2 Type CDL62_RS16045 SM00409 Immunoglobulin CDL62_RS16100 SM00878 Biotin carboxylase C-terminal domain CDL62_RS16110 SM00981 CDL62_RS16110 CDL62_RS16120 SM00710 Parallel beta-helix repeats CDL62_RS16165 SM01329 CDL62_RS16165 CDL62_RS16175 SM00387 Histidine kinase-like ATPases CDL62_RS16175 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS16190 SM00060 Fibronectin type 3 domain CDL62_RS16205 SM00421 helix_turn_helix, Lux Regulon CDL62_RS16205 SM00448 cheY-homologous receiver domain CDL62_RS16210 SM00028 Tetratricopeptide repeats CDL62_RS16210 SM00387 Histidine kinase-like ATPases CDL62_RS16225 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS16230 SM01321 CDL62_RS16230 CDL62_RS16250 SM00881 CoA binding domain CDL62_RS16285 SM00331 Sigma factor PP2C-like phosphatases CDL62_RS16285 SM00448 cheY-homologous receiver domain CDL62_RS16290 SM00357 Cold shock protein domain CDL62_RS16365 SM00822 CDL62_RS16365 CDL62_RS16380 SM00028 Tetratricopeptide repeats CDL62_RS16395 SM00562 CDL62_RS16395 CDL62_RS16425 SM00938 Nitrogen regulatory protein P-II CDL62_RS16445 SM00563 Phosphate acyltransferases CDL62_RS16450 SM00028 Tetratricopeptide repeats CDL62_RS16455 SM00421 helix_turn_helix, Lux Regulon CDL62_RS16480 SM00448 cheY-homologous receiver domain CDL62_RS16510 SM01321 CDL62_RS16510 CDL62_RS16520 SM00903 Flavin reductase like domain CDL62_RS16540 SM00028 Tetratricopeptide repeats CDL62_RS16545 SM00382 ATPases associated with a variety of cellular activities CDL62_RS16545 SM01086 C-terminal, D2-small domain, of ClpB protein CDL62_RS16550 SM00434 DNA Topoisomerase IV CDL62_RS16555 SM00028 Tetratricopeptide repeats CDL62_RS16595 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS16610 SM00861 Transketolase, pyrimidine binding domain CDL62_RS16625 SM00563 Phosphate acyltransferases CDL62_RS16630 SM01329 CDL62_RS16630 CDL62_RS16640 SM00382 ATPases associated with a variety of cellular activities CDL62_RS16660 SM00729 Elongator protein 3, MiaB family, Radical SAM CDL62_RS16665 SM00382 ATPases associated with a variety of cellular activities CDL62_RS16665 SM00962 SRP54-type protein, GTPase domain CDL62_RS16665 SM00963 SRP54-type protein, helical bundle domain CDL62_RS16685 SM00852 Probable molybdopterin binding domain CDL62_RS16700 SM00490 helicase superfamily c-terminal domain CDL62_RS16700 SM00957 SecA DEAD-like domain CDL62_RS16700 SM00958 SecA preprotein cross-linking domain CDL62_RS16715 SM00450 Rhodanese Homology Domain CDL62_RS16745 SM00954 Region found in RelA / SpoT proteins CDL62_RS16765 SM00292 breast cancer carboxy-terminal domain CDL62_RS16765 SM00532 Ligase N family CDL62_RS16780 SM00028 Tetratricopeptide repeats CDL62_RS16805 SM00458 Ricin-type beta-trefoil CDL62_RS16805 SM00710 Parallel beta-helix repeats CDL62_RS16810 SM00487 DEAD-like helicases superfamily CDL62_RS16810 SM00490 helicase superfamily c-terminal domain CDL62_RS16845 SM00633 Glycosyl hydrolase family 10 CDL62_RS16855 SM00382 ATPases associated with a variety of cellular activities CDL62_RS16855 SM00962 SRP54-type protein, GTPase domain CDL62_RS16855 SM00963 SRP54-type protein, helical bundle domain CDL62_RS16890 SM00854 Bacterial capsule synthesis protein PGA_cap CDL62_RS16895 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CDL62_RS16895 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CDL62_RS16895 SM00493 CDL62_RS16895 CDL62_RS16905 SM00729 Elongator protein 3, MiaB family, Radical SAM CDL62_RS16910 SM00729 Elongator protein 3, MiaB family, Radical SAM CDL62_RS16965 SM00245 tail specific protease CDL62_RS17120 SM00028 Tetratricopeptide repeats CDL62_RS17190 SM01321 CDL62_RS17190 CDL62_RS17200 SM00382 ATPases associated with a variety of cellular activities CDL62_RS17210 SM00387 Histidine kinase-like ATPases CDL62_RS17210 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS17255 SM00322 K homology RNA-binding domain CDL62_RS17255 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDL62_RS17270 SM00729 Elongator protein 3, MiaB family, Radical SAM CDL62_RS17280 SM00729 Elongator protein 3, MiaB family, Radical SAM CDL62_RS17390 SM00382 ATPases associated with a variety of cellular activities CDL62_RS17390 SM01086 C-terminal, D2-small domain, of ClpB protein CDL62_RS17410 SM00382 ATPases associated with a variety of cellular activities CDL62_RS17440 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDL62_RS17440 SM00245 tail specific protease CDL62_RS17460 SM00316 Ribosomal protein S1-like RNA-binding domain CDL62_RS17465 SM00984 UDP binding domain CDL62_RS17615 SM00822 CDL62_RS17615 CDL62_RS17620 SM00419 helix_turn_helix, cAMP Regulatory protein CDL62_RS17655 SM00836 DALR anticodon binding domain CDL62_RS17655 SM01016 Arginyl tRNA synthetase N terminal dom CDL62_RS17660 SM00091 PAS domain CDL62_RS17660 SM00387 Histidine kinase-like ATPases CDL62_RS17660 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS17705 SM00633 Glycosyl hydrolase family 10 CDL62_RS17715 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS17785 SM00899 CDL62_RS17785 CDL62_RS17795 SM00712 DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria. CDL62_RS17810 SM01323 CDL62_RS17810 CDL62_RS17835 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CDL62_RS17920 SM00028 Tetratricopeptide repeats CDL62_RS17920 SM00387 Histidine kinase-like ATPases CDL62_RS17960 SM00859 Semialdehyde dehydrogenase, NAD binding domain CDL62_RS18025 SM00387 Histidine kinase-like ATPases CDL62_RS18025 SM00388 His Kinase A (phosphoacceptor) domain CDL62_RS18045 SM00822 CDL62_RS18045 CDL62_RS18060 SM00448 cheY-homologous receiver domain CDL62_RS18060 SM00850 LytTr DNA-binding domain CDL62_RS18070 SM00411 bacterial (prokaryotic) histone like domain CDL62_RS18090 SM00843 CDL62_RS18090 CDL62_RS18145 SM00382 ATPases associated with a variety of cellular activities CDL62_RS18165 SM00849 Metallo-beta-lactamase superfamily CDL62_RS18185 SM00028 Tetratricopeptide repeats CDL62_RS18185 SM00671 Sel1-like repeats. CDL62_RS18225 SM00530 Helix-turn-helix XRE-family like proteins CDL62_RS18250 SM00420 helix_turn_helix, Deoxyribose operon repressor CDL62_RS18255 SM00382 ATPases associated with a variety of cellular activities CDL62_RS18375 SM00382 ATPases associated with a variety of cellular activities CDL62_RS18435 SM00967 RNA 2'-O ribose methyltransferase substrate binding CDL62_RS18440 SM00382 ATPases associated with a variety of cellular activities CDL62_RS18445 SM00257 Lysin motif