locus-tag	class	description
E3E15_RS00005	PF11638	DnaA N-terminal domain
E3E15_RS00005	PF08299	Bacterial dnaA protein helix-turn-helix
E3E15_RS00005	PF00308	Bacterial dnaA  protein
E3E15_RS00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
E3E15_RS00010	PF02767	DNA polymerase III beta subunit, central domain
E3E15_RS00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
E3E15_RS00035	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
E3E15_RS00035	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
E3E15_RS00040	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
E3E15_RS00040	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
E3E15_RS00040	PF02142	MGS-like domain
E3E15_RS00045	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
E3E15_RS00045	PF00117	Glutamine amidotransferase class-I
E3E15_RS00050	PF06767	Sif protein
E3E15_RS00050	PF00657	GDSL-like Lipase/Acylhydrolase
E3E15_RS00055	PF00773	RNB domain
E3E15_RS00060	PF02230	Phospholipase/Carboxylesterase
E3E15_RS00065	PF03900	Porphobilinogen deaminase, C-terminal domain
E3E15_RS00065	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
E3E15_RS00070	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
E3E15_RS00090	PF00005	ABC transporter
E3E15_RS00105	PF00132	Bacterial transferase hexapeptide (six repeats)
E3E15_RS00110	PF03550	Outer membrane lipoprotein LolB
E3E15_RS00115	PF00288	GHMP kinases N terminal domain
E3E15_RS00130	PF02325	YGGT family
E3E15_RS00135	PF02594	Uncharacterised ACR, YggU family COG1872
E3E15_RS00145	PF18030	RimK PreATP-grasp domain
E3E15_RS00145	PF08443	RimK-like ATP-grasp domain
E3E15_RS00150	PF00753	Metallo-beta-lactamase superfamily
E3E15_RS00150	PF03772	Competence protein
E3E15_RS00165	PF00654	Voltage gated chloride channel
E3E15_RS00185	PF13520	Amino acid permease
E3E15_RS00240	PF00872	Transposase, Mutator family
E3E15_RS00255	PF00872	Transposase, Mutator family
E3E15_RS00265	PF03222	Tryptophan/tyrosine permease family
E3E15_RS00270	PF01926	50S ribosome-binding GTPase
E3E15_RS00270	PF01018	GTP1/OBG
E3E15_RS00275	PF13520	Amino acid permease
E3E15_RS00280	PF00005	ABC transporter
E3E15_RS00280	PF06472	ABC transporter transmembrane region 2
E3E15_RS00290	PF02938	GAD domain
E3E15_RS00290	PF00152	tRNA synthetases class II (D, K and N) 
E3E15_RS00290	PF01336	OB-fold nucleic acid binding domain
E3E15_RS00295	PF02896	PEP-utilising enzyme, TIM barrel domain
E3E15_RS00295	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
E3E15_RS00295	PF00391	PEP-utilising enzyme, mobile domain
E3E15_RS00300	PF02421	Ferrous iron transport protein B
E3E15_RS00300	PF17910	FeoB cytosolic helical domain
E3E15_RS00300	PF07670	Nucleoside recognition
E3E15_RS00300	PF07664	Ferrous iron transport protein B C terminus
E3E15_RS00305	PF00929	Exonuclease
E3E15_RS00310	PF09285	Elongation factor P, C-terminal
E3E15_RS00310	PF01132	Elongation factor P (EF-P) OB domain
E3E15_RS00310	PF08207	Elongation factor P (EF-P) KOW-like domain
E3E15_RS00315	PF00114	Pilin (bacterial filament)
E3E15_RS00315	PF07963	Prokaryotic N-terminal methylation motif
E3E15_RS00320	PF03279	Bacterial lipid A biosynthesis acyltransferase
E3E15_RS00325	PF03279	Bacterial lipid A biosynthesis acyltransferase
E3E15_RS00330	PF02096	60Kd inner membrane protein
E3E15_RS00330	PF14849	YidC periplasmic domain
E3E15_RS00335	PF01809	Putative membrane protein insertion efficiency factor
E3E15_RS00340	PF00825	Ribonuclease P
E3E15_RS00345	PF00468	Ribosomal protein L34
E3E15_RS00350	PF03222	Tryptophan/tyrosine permease family
E3E15_RS00355	PF02527	rRNA small subunit methyltransferase G
E3E15_RS00360	PF01168	Alanine racemase, N-terminal domain
E3E15_RS00365	PF07690	Major Facilitator Superfamily
E3E15_RS00370	PF13580	SIS domain
E3E15_RS00375	PF04355	SmpA / OmlA family
E3E15_RS00380	PF01649	Ribosomal protein S20
E3E15_RS00390	PF00291	Pyridoxal-phosphate dependent enzyme
E3E15_RS00395	PF00290	Tryptophan synthase alpha chain
E3E15_RS00405	PF10431	C-terminal, D2-small domain, of ClpB protein 
E3E15_RS00405	PF02861	Clp amino terminal domain, pathogenicity island component
E3E15_RS00405	PF00004	ATPase family associated with various cellular activities (AAA)
E3E15_RS00405	PF07724	AAA domain (Cdc48 subfamily)
E3E15_RS00405	PF17871	AAA lid domain
E3E15_RS00440	PF01553	Acyltransferase
E3E15_RS00450	PF01300	Telomere recombination
E3E15_RS00455	PF00575	S1 RNA binding domain
E3E15_RS00460	PF14437	MafB19-like deaminase
E3E15_RS00465	PF07478	D-ala D-ala ligase C-terminus
E3E15_RS00475	PF02491	SHS2 domain inserted in FTSA
E3E15_RS00480	PF12327	FtsZ family, C-terminal domain
E3E15_RS00480	PF00091	Tubulin/FtsZ family, GTPase domain
E3E15_RS00485	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
E3E15_RS00490	PF12169	DNA polymerase III subunits gamma and tau domain III
E3E15_RS00490	PF12170	DNA polymerase III tau subunit V interacting with alpha
E3E15_RS00500	PF03600	Citrate transporter
E3E15_RS00505	PF07690	Major Facilitator Superfamily
E3E15_RS00515	PF00872	Transposase, Mutator family
E3E15_RS00540	PF02321	Outer membrane efflux protein
E3E15_RS00550	PF00156	Phosphoribosyl transferase domain
E3E15_RS00555	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
E3E15_RS00555	PF02769	AIR synthase related protein, C-terminal domain
E3E15_RS00555	PF18076	Formylglycinamide ribonucleotide amidotransferase N-terminal
E3E15_RS00570	PF10397	Adenylosuccinate lyase C-terminus
E3E15_RS00570	PF00206	Lyase
E3E15_RS00585	PF02686	Glu-tRNAGln amidotransferase C subunit
E3E15_RS00590	PF01425	Amidase
E3E15_RS00595	PF02637	GatB domain
E3E15_RS00595	PF02934	GatB/GatE catalytic domain
E3E15_RS00605	PF01118	Semialdehyde dehydrogenase, NAD binding domain
E3E15_RS00605	PF02774	Semialdehyde dehydrogenase, dimerisation domain
E3E15_RS00615	PF00872	Transposase, Mutator family
E3E15_RS00625	PF07690	Major Facilitator Superfamily
E3E15_RS00635	PF06276	Ferric iron reductase FhuF-like transporter
E3E15_RS00635	PF04183	IucA / IucC family
E3E15_RS00640	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
E3E15_RS00645	PF04183	IucA / IucC family
E3E15_RS00645	PF06276	Ferric iron reductase FhuF-like transporter
E3E15_RS00650	PF00282	Pyridoxal-dependent decarboxylase conserved domain
E3E15_RS00655	PF00202	Aminotransferase class-III
E3E15_RS00660	PF00696	Amino acid kinase family
E3E15_RS00660	PF01842	ACT domain
E3E15_RS00665	PF01475	Ferric uptake regulator family
E3E15_RS00685	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
E3E15_RS00690	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
E3E15_RS00695	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
E3E15_RS00700	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
E3E15_RS00710	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
E3E15_RS00710	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
E3E15_RS00710	PF10531	SLBB domain
E3E15_RS00715	PF00384	Molybdopterin oxidoreductase
E3E15_RS00715	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
E3E15_RS00715	PF09326	NADH-ubiquinone oxidoreductase subunit G, C-terminal
E3E15_RS00720	PF00146	NADH dehydrogenase
E3E15_RS00725	PF12838	4Fe-4S dicluster domain
E3E15_RS00730	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
E3E15_RS00735	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
E3E15_RS00740	PF00361	Proton-conducting membrane transporter
E3E15_RS00740	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
E3E15_RS00745	PF00361	Proton-conducting membrane transporter
E3E15_RS00745	PF01059	NADH-ubiquinone oxidoreductase chain 4, amino terminus
E3E15_RS00750	PF00361	Proton-conducting membrane transporter
E3E15_RS00760	PF04380	Membrane fusogenic activity
E3E15_RS00765	PF01078	Magnesium chelatase, subunit ChlI
E3E15_RS00765	PF13335	Magnesium chelatase, subunit ChlI C-terminal
E3E15_RS00770	PF01208	Uroporphyrinogen decarboxylase (URO-D)
E3E15_RS00780	PF02576	RimP N-terminal domain
E3E15_RS00780	PF17384	RimP C-terminal SH3 domain
E3E15_RS00785	PF08529	NusA N-terminal domain
E3E15_RS00785	PF13184	NusA-like KH domain
E3E15_RS00790	PF00009	Elongation factor Tu GTP binding domain
E3E15_RS00790	PF11987	Translation-initiation factor 2
E3E15_RS00790	PF04760	Translation initiation factor IF-2, N-terminal region
E3E15_RS00795	PF02033	Ribosome-binding factor A
E3E15_RS00800	PF03129	Anticodon binding domain
E3E15_RS00800	PF13393	Histidyl-tRNA synthetase
E3E15_RS00810	PF03969	AFG1-like ATPase
E3E15_RS00815	PF00849	RNA pseudouridylate synthase
E3E15_RS00815	PF01479	S4 domain
E3E15_RS00830	PF00119	ATP synthase A chain
E3E15_RS00835	PF00137	ATP synthase subunit C
E3E15_RS00840	PF00430	ATP synthase B/B' CF(0)
E3E15_RS00845	PF00213	ATP synthase delta (OSCP) subunit
E3E15_RS00850	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
E3E15_RS00850	PF02874	ATP synthase alpha/beta family, beta-barrel domain
E3E15_RS00850	PF00306	ATP synthase alpha/beta chain, C terminal domain
E3E15_RS00855	PF00231	ATP synthase
E3E15_RS00860	PF02874	ATP synthase alpha/beta family, beta-barrel domain
E3E15_RS00860	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
E3E15_RS00865	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
E3E15_RS00875	PF00749	tRNA synthetases class I (E and Q), catalytic domain
E3E15_RS00880	PF00872	Transposase, Mutator family
E3E15_RS00915	PF08212	Lipocalin-like domain
E3E15_RS00925	PF04960	Glutaminase
E3E15_RS00930	PF03951	Glutamine synthetase, beta-Grasp domain
E3E15_RS00930	PF00120	Glutamine synthetase, catalytic domain
E3E15_RS00940	PF02470	MlaD protein
E3E15_RS00945	PF02405	Permease MlaE
E3E15_RS00950	PF00005	ABC transporter
E3E15_RS00955	PF03776	Septum formation topological specificity factor MinE
E3E15_RS00960	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
E3E15_RS00965	PF05209	Septum formation inhibitor MinC, N-terminal domain
E3E15_RS00965	PF03775	Septum formation inhibitor MinC, C-terminal domain
E3E15_RS00970	PF00471	Ribosomal protein L33
E3E15_RS00975	PF00830	Ribosomal L28 family
E3E15_RS00985	PF00270	DEAD/DEAH box helicase
E3E15_RS00985	PF17191	RecG wedge domain
E3E15_RS00985	PF00271	Helicase conserved C-terminal domain
E3E15_RS01005	PF05683	Fumarase C-terminus
E3E15_RS01010	PF00293	NUDIX domain
E3E15_RS01025	PF00860	Permease family
E3E15_RS01030	PF06969	HemN C-terminal domain
E3E15_RS01030	PF04055	Radical SAM superfamily
E3E15_RS01045	PF07690	Major Facilitator Superfamily
E3E15_RS01050	PF00694	Aconitase C-terminal domain
E3E15_RS01050	PF00330	Aconitase family (aconitate hydratase)
E3E15_RS01060	PF00437	Type II/IV secretion system protein
E3E15_RS01065	PF02322	Cytochrome bd terminal oxidase subunit II
E3E15_RS01070	PF01654	Cytochrome bd terminal oxidase subunit I
E3E15_RS01075	PF01370	NAD dependent epimerase/dehydratase family
E3E15_RS01075	PF08338	Domain of unknown function (DUF1731)
E3E15_RS01080	PF00512	His Kinase A (phospho-acceptor) domain
E3E15_RS01080	PF08521	Two-component sensor kinase N-terminal
E3E15_RS01080	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
E3E15_RS01100	PF00872	Transposase, Mutator family
E3E15_RS01135	PF00166	Chaperonin 10 Kd subunit
E3E15_RS01140	PF00118	TCP-1/cpn60 chaperonin family
E3E15_RS01150	PF07992	Pyridine nucleotide-disulphide oxidoreductase
E3E15_RS01160	PF00106	short chain dehydrogenase
E3E15_RS01175	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
E3E15_RS01175	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
E3E15_RS01180	PF13520	Amino acid permease
E3E15_RS01185	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
E3E15_RS01185	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
E3E15_RS01200	PF00226	DnaJ domain
E3E15_RS01200	PF01556	DnaJ C terminal domain
E3E15_RS01205	PF03222	Tryptophan/tyrosine permease family
E3E15_RS01220	PF13291	ACT domain
E3E15_RS01220	PF02824	TGS domain
E3E15_RS01220	PF04607	Region found in RelA / SpoT proteins
E3E15_RS01235	PF04445	Putative SAM-dependent methyltransferase
E3E15_RS01240	PF00589	Phage integrase family
E3E15_RS01240	PF02899	Phage integrase, N-terminal SAM-like domain
E3E15_RS01245	PF03222	Tryptophan/tyrosine permease family
E3E15_RS01250	PF02556	Preprotein translocase subunit SecB
E3E15_RS01260	PF05190	MutS family domain IV
E3E15_RS01260	PF00488	MutS domain V
E3E15_RS01260	PF05188	MutS domain II
E3E15_RS01260	PF05192	MutS domain III
E3E15_RS01260	PF01624	MutS domain I
E3E15_RS01265	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
E3E15_RS01285	PF13580	SIS domain
E3E15_RS01300	PF00999	Sodium/hydrogen exchanger family
E3E15_RS01310	PF00579	tRNA synthetases class I (W and Y)
E3E15_RS01325	PF01121	Dephospho-CoA kinase
E3E15_RS01335	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
E3E15_RS01335	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
E3E15_RS01335	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
E3E15_RS01335	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
E3E15_RS01350	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
E3E15_RS01355	PF06769	YoeB-like toxin of bacterial type II toxin-antitoxin system
E3E15_RS01375	PF00456	Transketolase, thiamine diphosphate binding domain
E3E15_RS01375	PF17831	Pyruvate dehydrogenase E1 component middle domain
E3E15_RS01380	PF00364	Biotin-requiring enzyme
E3E15_RS01380	PF02817	e3 binding domain
E3E15_RS01380	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
E3E15_RS01385	PF07992	Pyridine nucleotide-disulphide oxidoreductase
E3E15_RS01385	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
E3E15_RS01400	PF07836	DmpG-like communication domain
E3E15_RS01400	PF00682	HMGL-like
E3E15_RS01410	PF00180	Isocitrate/isopropylmalate dehydrogenase
E3E15_RS01410	PF03737	Aldolase/RraA
E3E15_RS01425	PF07690	Major Facilitator Superfamily
E3E15_RS01435	PF03167	Uracil DNA glycosylase superfamily
E3E15_RS01440	PF03989	DNA gyrase C-terminal domain, beta-propeller
E3E15_RS01440	PF00521	DNA gyrase/topoisomerase IV, subunit A
E3E15_RS01445	PF13288	DXP reductoisomerase C-terminal domain
E3E15_RS01445	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
E3E15_RS01445	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
E3E15_RS01450	PF01103	Surface antigen
E3E15_RS01450	PF07244	Surface antigen variable number repeat
E3E15_RS01460	PF00132	Bacterial transferase hexapeptide (six repeats)
E3E15_RS01460	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
E3E15_RS01465	PF07977	FabA-like domain
E3E15_RS01470	PF00132	Bacterial transferase hexapeptide (six repeats)
E3E15_RS01470	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
E3E15_RS01475	PF02684	Lipid-A-disaccharide synthetase
E3E15_RS01495	PF03976	Polyphosphate kinase 2 (PPK2)
E3E15_RS01500	PF01066	CDP-alcohol phosphatidyltransferase
E3E15_RS01505	PF00348	Polyprenyl synthetase
E3E15_RS01510	PF00534	Glycosyl transferases group 1
E3E15_RS01510	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
E3E15_RS01515	PF01725	Ham1 family
E3E15_RS01520	PF14748	Pyrroline-5-carboxylate reductase dimerisation
E3E15_RS01520	PF03807	NADP oxidoreductase coenzyme F420-dependent
E3E15_RS01525	PF00072	Response regulator receiver domain
E3E15_RS01525	PF00486	Transcriptional regulatory protein, C terminal
E3E15_RS01530	PF10502	Signal peptidase, peptidase S26 
E3E15_RS01535	PF00035	Double-stranded RNA binding motif
E3E15_RS01535	PF14622	Ribonuclease-III-like
E3E15_RS01540	PF01509	TruB family pseudouridylate synthase (N terminal domain)
E3E15_RS01540	PF16198	tRNA pseudouridylate synthase B C-terminal domain
E3E15_RS01545	PF17876	Cold shock domain
E3E15_RS01545	PF08206	Ribonuclease B OB domain
E3E15_RS01545	PF00575	S1 RNA binding domain
E3E15_RS01545	PF08461	Ribonuclease R winged-helix domain
E3E15_RS01545	PF00773	RNB domain
E3E15_RS01555	PF00106	short chain dehydrogenase
E3E15_RS01585	PF00989	PAS fold
E3E15_RS01585	PF00512	His Kinase A (phospho-acceptor) domain
E3E15_RS01585	PF00672	HAMP domain
E3E15_RS01585	PF18698	Histidine kinase sensor domain
E3E15_RS01585	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
E3E15_RS01590	PF00486	Transcriptional regulatory protein, C terminal
E3E15_RS01590	PF00072	Response regulator receiver domain
E3E15_RS01600	PF00491	Arginase family
E3E15_RS01605	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
E3E15_RS01605	PF18127	Domain of unknown function (DUF5598)
E3E15_RS01625	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
E3E15_RS01625	PF07497	Rho termination factor, RNA-binding domain
E3E15_RS01625	PF07498	Rho termination factor, N-terminal domain
E3E15_RS01630	PF00085	Thioredoxin
E3E15_RS01635	PF02541	Ppx/GppA phosphatase family
E3E15_RS01640	PF12002	MgsA AAA+ ATPase C terminal
E3E15_RS01640	PF16193	AAA C-terminal domain
E3E15_RS01640	PF00004	ATPase family associated with various cellular activities (AAA)
E3E15_RS01645	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
E3E15_RS01645	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
E3E15_RS01655	PF02163	Peptidase family M50
E3E15_RS01660	PF13361	UvrD-like helicase C-terminal domain
E3E15_RS01660	PF00580	UvrD/REP helicase N-terminal domain
E3E15_RS01660	PF12705	PD-(D/E)XK nuclease superfamily
E3E15_RS01665	PF13538	UvrD-like helicase C-terminal domain
E3E15_RS01680	PF02666	Phosphatidylserine decarboxylase
E3E15_RS01690	PF01467	Cytidylyltransferase-like
E3E15_RS01690	PF00293	NUDIX domain
E3E15_RS01695	PF12804	MobA-like NTP transferase domain
E3E15_RS01695	PF00132	Bacterial transferase hexapeptide (six repeats)
E3E15_RS01700	PF01380	SIS domain
E3E15_RS01770	PF01165	Ribosomal protein S21
E3E15_RS01775	PF00313	'Cold-shock' DNA-binding domain
E3E15_RS01785	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
E3E15_RS01785	PF00953	Glycosyl transferase family 4
E3E15_RS01790	PF08245	Mur ligase middle domain
E3E15_RS01790	PF02875	Mur ligase family, glutamate ligase domain
E3E15_RS01795	PF01098	Cell cycle protein
E3E15_RS01830	PF02481	DNA recombination-mediator protein A
E3E15_RS01830	PF17782	DprA winged helix domain
E3E15_RS01835	PF00691	OmpA family
E3E15_RS01850	PF02401	LytB protein
E3E15_RS01855	PF07736	Chorismate mutase type I
E3E15_RS01860	PF01066	CDP-alcohol phosphatidyltransferase
E3E15_RS01870	PF01618	MotA/TolQ/ExbB proton channel family
E3E15_RS01875	PF02472	Biopolymer transport protein ExbD/TolR
E3E15_RS01885	PF07676	WD40-like Beta Propeller Repeat
E3E15_RS01900	PF18693	TRAM domain
E3E15_RS01900	PF04055	Radical SAM superfamily
E3E15_RS01900	PF00919	Uncharacterized protein family UPF0004
E3E15_RS01910	PF13309	HTH domain
E3E15_RS01910	PF08348	YheO-like PAS domain
E3E15_RS01915	PF01925	Sulfite exporter TauE/SafE
E3E15_RS01940	PF02803	Thiolase, C-terminal domain
E3E15_RS01940	PF00108	Thiolase, N-terminal domain
E3E15_RS01945	PF00378	Enoyl-CoA hydratase/isomerase
E3E15_RS01945	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
E3E15_RS01945	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
E3E15_RS01950	PF02770	Acyl-CoA dehydrogenase, middle domain
E3E15_RS01950	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
E3E15_RS01950	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
E3E15_RS01950	PF09317	Domain of unknown function (DUF1974)
E3E15_RS01955	PF00501	AMP-binding enzyme
E3E15_RS01955	PF13193	AMP-binding enzyme C-terminal domain
E3E15_RS01975	PF07690	Major Facilitator Superfamily
E3E15_RS01980	PF00005	ABC transporter
E3E15_RS01980	PF12848	ABC transporter
E3E15_RS01980	PF16326	ABC transporter C-terminal domain
E3E15_RS01985	PF03702	Anhydro-N-acetylmuramic acid kinase
E3E15_RS02000	PF00533	BRCA1 C Terminus (BRCT) domain
E3E15_RS02000	PF03120	NAD-dependent DNA ligase OB-fold domain
E3E15_RS02000	PF01653	NAD-dependent DNA ligase adenylation domain
E3E15_RS02000	PF12826	Helix-hairpin-helix motif
E3E15_RS02000	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
E3E15_RS02010	PF17946	RecC C-terminal domain
E3E15_RS02015	PF01026	TatD related DNase
E3E15_RS02025	PF01925	Sulfite exporter TauE/SafE
E3E15_RS02030	PF00005	ABC transporter
E3E15_RS02035	PF01061	ABC-2 type transporter
E3E15_RS02040	PF00535	Glycosyl transferase family 2
E3E15_RS02050	PF01513	ATP-NAD kinase
E3E15_RS02055	PF13509	S1 domain
E3E15_RS02055	PF17783	CvfB-like winged helix domain
E3E15_RS02060	PF01810	LysE type translocator
E3E15_RS02065	PF02390	Putative methyltransferase 
E3E15_RS02085	PF11127	Protein of unknown function (DUF2892)
E3E15_RS02085	PF00581	Rhodanese-like domain
E3E15_RS02090	PF00753	Metallo-beta-lactamase superfamily
E3E15_RS02090	PF16123	Hydroxyacylglutathione hydrolase C-terminus
E3E15_RS02095	PF01925	Sulfite exporter TauE/SafE
E3E15_RS02105	PF03692	Putative zinc- or iron-chelating domain
E3E15_RS02120	PF01029	NusB family
E3E15_RS02125	PF00795	Carbon-nitrogen hydrolase
E3E15_RS02130	PF00155	Aminotransferase class I and II
E3E15_RS02135	PF04073	Aminoacyl-tRNA editing domain
E3E15_RS02135	PF03129	Anticodon binding domain
E3E15_RS02135	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
E3E15_RS02145	PF02657	Fe-S metabolism associated domain
E3E15_RS02165	PF00753	Metallo-beta-lactamase superfamily
E3E15_RS02165	PF16123	Hydroxyacylglutathione hydrolase C-terminus
E3E15_RS02210	PF08329	Chitinase A, N-terminal domain
E3E15_RS02210	PF00704	Glycosyl hydrolases family 18
E3E15_RS02220	PF00083	Sugar (and other) transporter
E3E15_RS02225	PF13286	Phosphohydrolase-associated domain
E3E15_RS02225	PF01966	HD domain
E3E15_RS02230	PF00860	Permease family
E3E15_RS02245	PF06150	ChaB
E3E15_RS02260	PF07690	Major Facilitator Superfamily
E3E15_RS02265	PF01042	Endoribonuclease L-PSP
E3E15_RS02270	PF00375	Sodium:dicarboxylate symporter family
E3E15_RS02275	PF00005	ABC transporter
E3E15_RS02275	PF00664	ABC transporter transmembrane region
E3E15_RS02280	PF00664	ABC transporter transmembrane region
E3E15_RS02280	PF00005	ABC transporter
E3E15_RS02305	PF00480	ROK family
E3E15_RS02310	PF00155	Aminotransferase class I and II
E3E15_RS02320	PF02463	RecF/RecN/SMC N terminal domain
E3E15_RS02325	PF00872	Transposase, Mutator family
E3E15_RS02345	PF02403	Seryl-tRNA synthetase N-terminal domain
E3E15_RS02345	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
E3E15_RS02350	PF01676	Metalloenzyme superfamily
E3E15_RS02350	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
E3E15_RS02355	PF01565	FAD binding domain 
E3E15_RS02355	PF02913	FAD linked oxidases, C-terminal domain
E3E15_RS02355	PF13183	4Fe-4S dicluster domain
E3E15_RS02365	PF00313	'Cold-shock' DNA-binding domain
E3E15_RS02370	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
E3E15_RS02375	PF01048	Phosphorylase superfamily
E3E15_RS02380	PF06175	tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)
E3E15_RS02395	PF03458	UPF0126 domain
E3E15_RS02410	PF05193	Peptidase M16 inactive domain
E3E15_RS02410	PF00675	Insulinase (Peptidase family M16)
E3E15_RS02415	PF03739	Lipopolysaccharide export system permease LptF/LptG
E3E15_RS02420	PF03739	Lipopolysaccharide export system permease LptF/LptG
E3E15_RS02425	PF00883	Cytosol aminopeptidase family, catalytic domain
E3E15_RS02425	PF02789	Cytosol aminopeptidase family, N-terminal domain
E3E15_RS02430	PF00478	IMP dehydrogenase / GMP reductase domain
E3E15_RS02430	PF00571	CBS domain
E3E15_RS02440	PF00342	Phosphoglucose isomerase
E3E15_RS02445	PF07963	Prokaryotic N-terminal methylation motif
E3E15_RS02445	PF00114	Pilin (bacterial filament)
E3E15_RS02450	PF03449	Transcription elongation factor, N-terminal
E3E15_RS02450	PF01272	Transcription elongation factor, GreA/GreB, C-term
E3E15_RS02455	PF17755	UvrA DNA-binding domain
E3E15_RS02455	PF17760	UvrA interaction domain
E3E15_RS02460	PF01434	Peptidase family M41
E3E15_RS02460	PF00004	ATPase family associated with various cellular activities (AAA)
E3E15_RS02460	PF17862	AAA+ lid domain
E3E15_RS02460	PF06480	FtsH Extracellular
E3E15_RS02480	PF00872	Transposase, Mutator family
E3E15_RS02495	PF07516	SecA Wing and Scaffold domain
E3E15_RS02495	PF01043	SecA preprotein cross-linking domain
E3E15_RS02495	PF07517	SecA DEAD-like domain
E3E15_RS02495	PF02810	SEC-C motif
E3E15_RS02500	PF00829	Ribosomal prokaryotic L21 protein
E3E15_RS02505	PF01016	Ribosomal L27 protein
E3E15_RS02515	PF00528	Binding-protein-dependent transport system inner membrane component
E3E15_RS02520	PF00528	Binding-protein-dependent transport system inner membrane component
E3E15_RS02525	PF00005	ABC transporter
E3E15_RS02525	PF08402	TOBE domain
E3E15_RS02555	PF01168	Alanine racemase, N-terminal domain
E3E15_RS02555	PF00842	Alanine racemase, C-terminal domain
E3E15_RS02560	PF13520	Amino acid permease
E3E15_RS02575	PF01817	Chorismate mutase type II
E3E15_RS02575	PF01842	ACT domain
E3E15_RS02575	PF00800	Prephenate dehydratase
E3E15_RS02580	PF02872	5'-nucleotidase, C-terminal domain
E3E15_RS02580	PF00149	Calcineurin-like phosphoesterase
E3E15_RS02590	PF03313	Serine dehydratase alpha chain
E3E15_RS02590	PF03315	Serine dehydratase beta chain
E3E15_RS02595	PF00266	Aminotransferase class-V
E3E15_RS02600	PF01521	Iron-sulphur cluster biosynthesis
E3E15_RS02605	PF01883	Iron-sulfur cluster assembly protein
E3E15_RS02610	PF01467	Cytidylyltransferase-like
E3E15_RS02615	PF00037	4Fe-4S binding domain
E3E15_RS02625	PF01389	OmpA-like transmembrane domain
E3E15_RS02625	PF00691	OmpA family
E3E15_RS02640	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
E3E15_RS02640	PF02824	TGS domain
E3E15_RS02640	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
E3E15_RS02640	PF03129	Anticodon binding domain
E3E15_RS02645	PF00707	Translation initiation factor IF-3, C-terminal domain
E3E15_RS02645	PF05198	Translation initiation factor IF-3, N-terminal domain
E3E15_RS02650	PF01632	Ribosomal protein L35
E3E15_RS02655	PF00453	Ribosomal protein L20
E3E15_RS02665	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
E3E15_RS02680	PF13932	GidA associated domain
E3E15_RS02680	PF01134	Glucose inhibited division protein A
E3E15_RS02700	PF08411	Exonuclease C-terminal
E3E15_RS02700	PF00929	Exonuclease
E3E15_RS02705	PF02151	UvrB/uvrC motif
E3E15_RS02705	PF12344	Ultra-violet resistance protein B
E3E15_RS02705	PF17757	UvrB interaction domain
E3E15_RS02705	PF04851	Type III restriction enzyme, res subunit
E3E15_RS02705	PF00271	Helicase conserved C-terminal domain
E3E15_RS02715	PF01177	Asp/Glu/Hydantoin racemase
E3E15_RS02735	PF12399	Branched-chain amino acid ATP-binding cassette transporter
E3E15_RS02735	PF00005	ABC transporter
E3E15_RS02740	PF01557	Fumarylacetoacetate (FAA) hydrolase family
E3E15_RS02745	PF01048	Phosphorylase superfamily
E3E15_RS02750	PF01416	tRNA pseudouridine synthase
E3E15_RS02755	PF10431	C-terminal, D2-small domain, of ClpB protein 
E3E15_RS02755	PF07724	AAA domain (Cdc48 subfamily)
E3E15_RS02755	PF00004	ATPase family associated with various cellular activities (AAA)
E3E15_RS02760	PF00227	Proteasome subunit
E3E15_RS02770	PF03099	Biotin/lipoate A/B protein ligase family
E3E15_RS02770	PF10437	Bacterial lipoate protein ligase C-terminus
E3E15_RS02775	PF01479	S4 domain
E3E15_RS02775	PF00579	tRNA synthetases class I (W and Y)
E3E15_RS02805	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
E3E15_RS02815	PF00464	Serine hydroxymethyltransferase
E3E15_RS02820	PF04751	Protein of unknown function (DUF615)
E3E15_RS02825	PF00348	Polyprenyl synthetase
E3E15_RS02845	PF01171	PP-loop family
E3E15_RS02880	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
E3E15_RS02880	PF03466	LysR substrate binding domain
E3E15_RS02885	PF08534	Redoxin
E3E15_RS02900	PF08245	Mur ligase middle domain
E3E15_RS02905	PF14102	Capsule biosynthesis CapC
E3E15_RS02915	PF04607	Region found in RelA / SpoT proteins
E3E15_RS02915	PF02824	TGS domain
E3E15_RS02915	PF13291	ACT domain
E3E15_RS02920	PF00999	Sodium/hydrogen exchanger family
E3E15_RS02920	PF00582	Universal stress protein family
E3E15_RS02925	PF13662	Toprim domain
E3E15_RS02925	PF02132	RecR protein
E3E15_RS02930	PF02575	YbaB/EbfC DNA-binding family
E3E15_RS02935	PF04101	Glycosyltransferase family 28 C-terminal domain
E3E15_RS02935	PF03033	Glycosyltransferase family 28 N-terminal domain
E3E15_RS02940	PF01597	Glycine cleavage H-protein
E3E15_RS02950	PF00557	Metallopeptidase family M24
E3E15_RS02960	PF03989	DNA gyrase C-terminal domain, beta-propeller
E3E15_RS02960	PF00521	DNA gyrase/topoisomerase IV, subunit A
E3E15_RS02965	PF00872	Transposase, Mutator family
E3E15_RS02980	PF01048	Phosphorylase superfamily
E3E15_RS02985	PF01464	Transglycosylase SLT domain
E3E15_RS02985	PF00497	Bacterial extracellular solute-binding proteins, family 3
E3E15_RS02990	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
E3E15_RS02990	PF07733	Bacterial DNA polymerase III alpha NTPase domain
E3E15_RS02990	PF01336	OB-fold nucleic acid binding domain
E3E15_RS02990	PF14579	Helix-hairpin-helix motif
E3E15_RS02990	PF02811	PHP domain
E3E15_RS02995	PF04381	Putative exonuclease, RdgC
E3E15_RS03000	PF14493	Helix-turn-helix domain
E3E15_RS03000	PF05970	PIF1-like helicase
E3E15_RS03020	PF12704	MacB-like periplasmic core domain
E3E15_RS03020	PF02687	FtsX-like permease family
E3E15_RS03025	PF00005	ABC transporter
E3E15_RS03045	PF00872	Transposase, Mutator family
E3E15_RS03055	PF01548	Transposase
E3E15_RS03055	PF02371	Transposase IS116/IS110/IS902 family
E3E15_RS03060	PF02423	Ornithine cyclodeaminase/mu-crystallin family
E3E15_RS03065	PF01276	Orn/Lys/Arg decarboxylase, major domain
E3E15_RS03065	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
E3E15_RS03065	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
E3E15_RS03070	PF01571	Aminomethyltransferase folate-binding domain
E3E15_RS03070	PF08669	Glycine cleavage T-protein C-terminal barrel domain
E3E15_RS03075	PF01597	Glycine cleavage H-protein
E3E15_RS03080	PF02347	Glycine cleavage system P-protein
E3E15_RS03085	PF02347	Glycine cleavage system P-protein
E3E15_RS03090	PF02091	Glycyl-tRNA synthetase alpha subunit
E3E15_RS03095	PF02875	Mur ligase family, glutamate ligase domain
E3E15_RS03095	PF01225	Mur ligase family, catalytic domain
E3E15_RS03095	PF08245	Mur ligase middle domain
E3E15_RS03105	PF01380	SIS domain
E3E15_RS03110	PF00083	Sugar (and other) transporter
E3E15_RS03115	PF01784	NIF3 (NGG1p interacting factor 3)
E3E15_RS03120	PF04551	GcpE protein
E3E15_RS03130	PF01321	Creatinase/Prolidase N-terminal domain
E3E15_RS03130	PF00557	Metallopeptidase family M24
E3E15_RS03145	PF03695	Uncharacterised protein family (UPF0149)
E3E15_RS03150	PF01494	FAD binding domain
E3E15_RS03155	PF01494	FAD binding domain
E3E15_RS03160	PF02547	Queuosine biosynthesis protein
E3E15_RS03170	PF14437	MafB19-like deaminase
E3E15_RS03175	PF00857	Isochorismatase family
E3E15_RS03180	PF00999	Sodium/hydrogen exchanger family
E3E15_RS03185	PF00892	EamA-like transporter family
E3E15_RS03190	PF01571	Aminomethyltransferase folate-binding domain
E3E15_RS03195	PF13361	UvrD-like helicase C-terminal domain
E3E15_RS03195	PF00580	UvrD/REP helicase N-terminal domain
E3E15_RS03210	PF00083	Sugar (and other) transporter
E3E15_RS03235	PF00872	Transposase, Mutator family
E3E15_RS03240	PF00206	Lyase
E3E15_RS03240	PF10415	Fumarase C C-terminus
E3E15_RS03245	PF00916	Sulfate permease family
E3E15_RS03245	PF01740	STAS domain
E3E15_RS03255	PF01965	DJ-1/PfpI family
E3E15_RS03260	PF12848	ABC transporter
E3E15_RS03260	PF00005	ABC transporter
E3E15_RS03265	PF02028	BCCT, betaine/carnitine/choline family transporter
E3E15_RS03270	PF08032	RNA 2'-O ribose methyltransferase substrate binding
E3E15_RS03270	PF00588	SpoU rRNA Methylase family
E3E15_RS03275	PF00011	Hsp20/alpha crystallin family
E3E15_RS03280	PF00571	CBS domain
E3E15_RS03295	PF07690	Major Facilitator Superfamily
E3E15_RS03310	PF08331	Domain of unknown function (DUF1730)
E3E15_RS03325	PF00580	UvrD/REP helicase N-terminal domain
E3E15_RS03325	PF13361	UvrD-like helicase C-terminal domain
E3E15_RS03345	PF00462	Glutaredoxin
E3E15_RS03350	PF00462	Glutaredoxin
E3E15_RS03355	PF03477	ATP cone domain
E3E15_RS03355	PF02867	Ribonucleotide reductase, barrel domain
E3E15_RS03355	PF00317	Ribonucleotide reductase, all-alpha domain
E3E15_RS03360	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
E3E15_RS03360	PF00056	lactate/malate dehydrogenase, NAD binding domain
E3E15_RS03370	PF03232	Ubiquinone biosynthesis protein COQ7
E3E15_RS03380	PF00899	ThiF family
E3E15_RS03390	PF00578	AhpC/TSA family
E3E15_RS03390	PF10417	C-terminal domain of 1-Cys peroxiredoxin
E3E15_RS03400	PF03831	PhnA domain
E3E15_RS03400	PF08274	PhnA Zinc-Ribbon 
E3E15_RS03410	PF00929	Exonuclease
E3E15_RS03425	PF03435	Saccharopine dehydrogenase NADP binding domain
E3E15_RS03425	PF16653	Saccharopine dehydrogenase C-terminal domain
E3E15_RS03430	PF00171	Aldehyde dehydrogenase family
E3E15_RS03440	PF01165	Ribosomal protein S21
E3E15_RS03445	PF09424	Yqey-like protein
E3E15_RS03450	PF01807	CHC2 zinc finger
E3E15_RS03450	PF08275	DNA primase catalytic core, N-terminal domain
E3E15_RS03450	PF13662	Toprim domain
E3E15_RS03450	PF08278	DNA primase DnaG DnaB-binding 
E3E15_RS03450	PF10410	DnaB-helicase binding domain of primase
E3E15_RS03455	PF04545	Sigma-70, region 4
E3E15_RS03455	PF04539	Sigma-70 region 3
E3E15_RS03455	PF04542	Sigma-70 region 2 
E3E15_RS03455	PF00140	Sigma-70 factor, region 1.2
E3E15_RS03455	PF03979	Sigma-70 factor, region 1.1
E3E15_RS03455	PF04546	Sigma-70, non-essential region
E3E15_RS03465	PF00571	CBS domain
E3E15_RS03465	PF01595	Cyclin M transmembrane N-terminal domain
E3E15_RS03465	PF03471	Transporter associated domain
E3E15_RS03470	PF00132	Bacterial transferase hexapeptide (six repeats)
E3E15_RS03475	PF06071	Protein of unknown function (DUF933)
E3E15_RS03475	PF01926	50S ribosome-binding GTPase
E3E15_RS03480	PF01195	Peptidyl-tRNA hydrolase
E3E15_RS03495	PF01478	Type IV leader peptidase family
E3E15_RS03495	PF06750	Bacterial Peptidase A24 N-terminal domain
E3E15_RS03500	PF07992	Pyridine nucleotide-disulphide oxidoreductase
E3E15_RS03500	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
E3E15_RS03505	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
E3E15_RS03510	PF00291	Pyridoxal-phosphate dependent enzyme
E3E15_RS03515	PF00301	Rubredoxin
E3E15_RS03520	PF02245	Methylpurine-DNA glycosylase (MPG)
E3E15_RS03530	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
E3E15_RS03540	PF13417	Glutathione S-transferase, N-terminal domain
E3E15_RS03540	PF04399	Glutaredoxin 2, C terminal domain
E3E15_RS03545	PF04060	Putative Fe-S cluster
E3E15_RS03550	PF00730	HhH-GPD superfamily base excision DNA repair protein
E3E15_RS03550	PF00633	Helix-hairpin-helix motif
E3E15_RS03550	PF10576	Iron-sulfur binding domain of endonuclease III
E3E15_RS03565	PF01027	Inhibitor of apoptosis-promoting Bax1
E3E15_RS03570	PF00270	DEAD/DEAH box helicase
E3E15_RS03570	PF00271	Helicase conserved C-terminal domain
E3E15_RS03570	PF03461	TRCF domain
E3E15_RS03570	PF17757	UvrB interaction domain
E3E15_RS03570	PF02559	CarD-like/TRCF domain
E3E15_RS03590	PF04055	Radical SAM superfamily
E3E15_RS03590	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
E3E15_RS03600	PF01709	Transcriptional regulator
E3E15_RS03605	PF02075	Crossover junction endodeoxyribonuclease RuvC
E3E15_RS03615	PF00872	Transposase, Mutator family
E3E15_RS03620	PF01330	RuvA N terminal domain
E3E15_RS03620	PF07499	RuvA, C-terminal domain
E3E15_RS03625	PF07859	alpha/beta hydrolase fold
E3E15_RS03625	PF00331	Glycosyl hydrolase family 10
E3E15_RS03630	PF04055	Radical SAM superfamily
E3E15_RS03635	PF07650	KH domain
E3E15_RS03635	PF01926	50S ribosome-binding GTPase
E3E15_RS03650	PF01565	FAD binding domain 
E3E15_RS03650	PF02913	FAD linked oxidases, C-terminal domain
E3E15_RS03655	PF05191	Adenylate kinase, active site lid
E3E15_RS03680	PF11741	AMIN domain
E3E15_RS03680	PF00263	Bacterial type II and III secretion system protein
E3E15_RS03680	PF03958	Bacterial type II/III secretion system short domain
E3E15_RS03680	PF07660	Secretin and TonB N terminus short domain
E3E15_RS03685	PF01202	Shikimate kinase
E3E15_RS03690	PF01761	3-dehydroquinate synthase
E3E15_RS03700	PF03937	Flavinator of succinate dehydrogenase
E3E15_RS03705	PF00171	Aldehyde dehydrogenase family
E3E15_RS03705	PF01619	Proline dehydrogenase
E3E15_RS03705	PF14850	DNA-binding domain of Proline dehydrogenase
E3E15_RS03705	PF18327	Proline utilization A proline dehydrogenase N-terminal domain 
E3E15_RS03715	PF00872	Transposase, Mutator family
E3E15_RS03720	PF13520	Amino acid permease
E3E15_RS03725	PF07690	Major Facilitator Superfamily
E3E15_RS03730	PF04127	DNA / pantothenate metabolism flavoprotein
E3E15_RS03730	PF02441	Flavoprotein
E3E15_RS03735	PF00872	Transposase, Mutator family
E3E15_RS03740	PF03441	FAD binding domain of DNA photolyase
E3E15_RS03740	PF00875	DNA photolyase
E3E15_RS03745	PF00762	Ferrochelatase
E3E15_RS03770	PF00800	Prephenate dehydratase
E3E15_RS03770	PF01817	Chorismate mutase type II
E3E15_RS03775	PF00255	Glutathione peroxidase
E3E15_RS03780	PF03853	YjeF-related protein N-terminus
E3E15_RS03780	PF01256	Carbohydrate kinase
E3E15_RS03795	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
E3E15_RS03795	PF01411	tRNA synthetases class II (A)
E3E15_RS03795	PF02272	DHHA1 domain
E3E15_RS03805	PF00883	Cytosol aminopeptidase family, catalytic domain
E3E15_RS03805	PF12404	Peptidase 
E3E15_RS03810	PF00923	Transaldolase/Fructose-6-phosphate aldolase
E3E15_RS03820	PF13520	Amino acid permease
E3E15_RS03825	PF02254	TrkA-N domain
E3E15_RS03825	PF02080	TrkA-C domain
E3E15_RS03830	PF02082	Transcriptional regulator
E3E15_RS03835	PF01458	Uncharacterized protein family (UPF0051)
E3E15_RS03840	PF00005	ABC transporter
E3E15_RS03845	PF01458	Uncharacterized protein family (UPF0051)
E3E15_RS03855	PF00085	Thioredoxin
E3E15_RS03875	PF13359	DDE superfamily endonuclease
E3E15_RS03875	PF13613	Helix-turn-helix of DDE superfamily endonuclease
E3E15_RS03895	PF00293	NUDIX domain
E3E15_RS03900	PF02622	Uncharacterized ACR, COG1678
E3E15_RS03905	PF03652	Holliday junction resolvase
E3E15_RS03910	PF13603	Leucyl-tRNA synthetase, Domain 2
E3E15_RS03910	PF00133	tRNA synthetases class I (I, L, M and V)
E3E15_RS03910	PF08264	Anticodon-binding domain of tRNA
E3E15_RS03920	PF00924	Mechanosensitive ion channel
E3E15_RS03925	PF00692	dUTPase
E3E15_RS03930	PF10609	NUBPL iron-transfer P-loop NTPase
E3E15_RS03935	PF13091	PLD-like domain
E3E15_RS03935	PF13396	Phospholipase_D-nuclease N-terminal
E3E15_RS03940	PF03484	tRNA synthetase B5 domain
E3E15_RS03940	PF03483	B3/4 domain
E3E15_RS03940	PF03147	Ferredoxin-fold anticodon binding domain
E3E15_RS03940	PF01588	Putative tRNA binding domain
E3E15_RS03940	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
E3E15_RS03955	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
E3E15_RS03955	PF01409	tRNA synthetases class II core domain (F)
E3E15_RS03960	PF00854	POT family
E3E15_RS03965	PF01232	Mannitol dehydrogenase Rossmann domain
E3E15_RS03965	PF08125	Mannitol dehydrogenase C-terminal domain
E3E15_RS03970	PF03786	D-mannonate dehydratase (UxuA)
E3E15_RS03975	PF00294	pfkB family carbohydrate kinase
E3E15_RS03980	PF01081	KDPG and KHG aldolase
E3E15_RS03985	PF02614	Glucuronate isomerase
E3E15_RS03990	PF00083	Sugar (and other) transporter
E3E15_RS04000	PF05491	RuvB C-terminal winged helix domain
E3E15_RS04000	PF05496	Holliday junction DNA helicase RuvB P-loop domain
E3E15_RS04000	PF17864	RuvB AAA lid domain
E3E15_RS04015	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
E3E15_RS04020	PF00962	Adenosine/AMP deaminase
E3E15_RS04025	PF00933	Glycosyl hydrolase family 3 N terminal domain
E3E15_RS04025	PF01915	Glycosyl hydrolase family 3 C-terminal domain
E3E15_RS04040	PF00872	Transposase, Mutator family
E3E15_RS04045	PF00270	DEAD/DEAH box helicase
E3E15_RS04045	PF00271	Helicase conserved C-terminal domain
E3E15_RS04050	PF01227	GTP cyclohydrolase I
E3E15_RS04060	PF00248	Aldo/keto reductase family
E3E15_RS04070	PF00117	Glutamine amidotransferase class-I
E3E15_RS04075	PF04715	Anthranilate synthase component I, N terminal region
E3E15_RS04075	PF00425	chorismate binding enzyme
E3E15_RS04075	PF00117	Glutamine amidotransferase class-I
E3E15_RS04080	PF00501	AMP-binding enzyme
E3E15_RS04080	PF13193	AMP-binding enzyme C-terminal domain
E3E15_RS04095	PF00809	Pterin binding enzyme
E3E15_RS04095	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
E3E15_RS04100	PF07859	alpha/beta hydrolase fold
E3E15_RS04105	PF00202	Aminotransferase class-III
E3E15_RS04110	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
E3E15_RS04110	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
E3E15_RS04115	PF02911	Formyl transferase, C-terminal domain
E3E15_RS04115	PF00551	Formyl transferase
E3E15_RS04125	PF01170	Putative RNA methylase family UPF0020
E3E15_RS04125	PF02926	THUMP domain
E3E15_RS04125	PF10672	S-adenosylmethionine-dependent methyltransferase
E3E15_RS04145	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
E3E15_RS04145	PF02779	Transketolase, pyrimidine binding domain
E3E15_RS04145	PF02780	Transketolase, C-terminal domain
E3E15_RS04150	PF00958	GMP synthase C terminal domain
E3E15_RS04150	PF00117	Glutamine amidotransferase class-I
E3E15_RS04150	PF02540	NAD synthase
E3E15_RS04175	PF01176	Translation initiation factor 1A / IF-1
E3E15_RS04180	PF01925	Sulfite exporter TauE/SafE
E3E15_RS04190	PF00448	SRP54-type protein, GTPase domain
E3E15_RS04190	PF02881	SRP54-type protein, helical bundle domain
E3E15_RS04190	PF02978	Signal peptide binding domain
E3E15_RS04195	PF00793	DAHP synthetase I family
E3E15_RS04205	PF01266	FAD dependent oxidoreductase
E3E15_RS04205	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
E3E15_RS04210	PF03658	RnfH family Ubiquitin
E3E15_RS04215	PF03364	Polyketide cyclase / dehydrase and lipid transport
E3E15_RS04220	PF01668	SmpB protein
E3E15_RS04225	PF01171	PP-loop family
E3E15_RS04235	PF03372	Endonuclease/Exonuclease/phosphatase family
E3E15_RS04245	PF07992	Pyridine nucleotide-disulphide oxidoreductase
E3E15_RS04245	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
E3E15_RS04255	PF00854	POT family
E3E15_RS04265	PF13742	OB-fold nucleic acid binding domain
E3E15_RS04265	PF02601	Exonuclease VII, large subunit
E3E15_RS04270	PF00719	Inorganic pyrophosphatase
E3E15_RS04275	PF00768	D-alanyl-D-alanine carboxypeptidase
E3E15_RS04275	PF07943	Penicillin-binding protein 5, C-terminal domain
E3E15_RS04280	PF04359	Protein of unknown function (DUF493)
E3E15_RS04285	PF03099	Biotin/lipoate A/B protein ligase family
E3E15_RS04295	PF01386	Ribosomal L25p family
E3E15_RS04300	PF14572	Phosphoribosyl synthetase-associated domain
E3E15_RS04300	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
E3E15_RS04310	PF00814	Glycoprotease family
E3E15_RS04315	PF01979	Amidohydrolase family
E3E15_RS04320	PF01926	50S ribosome-binding GTPase
E3E15_RS04330	PF00899	ThiF family
E3E15_RS04335	PF00581	Rhodanese-like domain
E3E15_RS04335	PF00899	ThiF family
E3E15_RS04345	PF00682	HMGL-like
E3E15_RS04355	PF00265	Thymidine kinase
E3E15_RS04365	PF04055	Radical SAM superfamily
E3E15_RS04365	PF01938	TRAM domain
E3E15_RS04365	PF00919	Uncharacterized protein family UPF0004
E3E15_RS04370	PF02562	PhoH-like protein
E3E15_RS04375	PF02130	Uncharacterized protein family UPF0054
E3E15_RS04380	PF00571	CBS domain
E3E15_RS04380	PF03471	Transporter associated domain
E3E15_RS04385	PF00795	Carbon-nitrogen hydrolase
E3E15_RS04390	PF02646	RmuC family
E3E15_RS04395	PF08459	UvrC Helix-hairpin-helix N-terminal
E3E15_RS04395	PF02151	UvrB/uvrC motif
E3E15_RS04395	PF01541	GIY-YIG catalytic domain
E3E15_RS04400	PF00570	HRDC domain
E3E15_RS04400	PF01612	3'-5' exonuclease
E3E15_RS04405	PF07690	Major Facilitator Superfamily
E3E15_RS04410	PF05746	DALR anticodon binding domain
E3E15_RS04410	PF02092	Glycyl-tRNA synthetase beta subunit
E3E15_RS04415	PF01026	TatD related DNase
E3E15_RS04420	PF02463	RecF/RecN/SMC N terminal domain
E3E15_RS04440	PF01812	5-formyltetrahydrofolate cyclo-ligase family
E3E15_RS04450	PF09335	SNARE associated Golgi protein
E3E15_RS04455	PF09335	SNARE associated Golgi protein
E3E15_RS04460	PF11967	Recombination protein O N terminal
E3E15_RS04460	PF02565	Recombination protein O C terminal
E3E15_RS04470	PF00266	Aminotransferase class-V
E3E15_RS04475	PF10150	Ribonuclease E/G family
E3E15_RS04475	PF12111	Polyribonucleotide phosphorylase C terminal
E3E15_RS04475	PF00575	S1 RNA binding domain
E3E15_RS04480	PF01790	Prolipoprotein diacylglyceryl transferase
E3E15_RS04485	PF00303	Thymidylate synthase
E3E15_RS04490	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
E3E15_RS04490	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
E3E15_RS04495	PF11734	TilS substrate C-terminal domain
E3E15_RS04495	PF09179	TilS substrate binding domain
E3E15_RS04495	PF01171	PP-loop family
E3E15_RS04500	PF00202	Aminotransferase class-III
E3E15_RS04505	PF04055	Radical SAM superfamily
E3E15_RS04505	PF06968	Biotin and Thiamin Synthesis associated domain
E3E15_RS04510	PF00155	Aminotransferase class I and II
E3E15_RS04525	PF08279	HTH domain
E3E15_RS04525	PF03099	Biotin/lipoate A/B protein ligase family
E3E15_RS04525	PF02237	Biotin protein ligase C terminal domain
E3E15_RS04530	PF00625	Guanylate kinase
E3E15_RS04560	PF00155	Aminotransferase class I and II
E3E15_RS04570	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
E3E15_RS04590	PF00270	DEAD/DEAH box helicase
E3E15_RS04590	PF03880	DbpA RNA binding domain   
E3E15_RS04590	PF00271	Helicase conserved C-terminal domain
E3E15_RS04605	PF02348	Cytidylyltransferase
E3E15_RS04610	PF03966	Trm112p-like protein
E3E15_RS04630	PF16177	Acetyl-coenzyme A synthetase N-terminus
E3E15_RS04630	PF13193	AMP-binding enzyme C-terminal domain
E3E15_RS04630	PF00501	AMP-binding enzyme
E3E15_RS04635	PF00483	Nucleotidyl transferase
E3E15_RS04640	PF16916	Dimerisation domain of Zinc Transporter
E3E15_RS04640	PF01545	Cation efflux family
E3E15_RS04655	PF00155	Aminotransferase class I and II
E3E15_RS04670	PF00849	RNA pseudouridylate synthase
E3E15_RS04670	PF01479	S4 domain
E3E15_RS04680	PF04055	Radical SAM superfamily
E3E15_RS04685	PF03796	DnaB-like helicase C terminal domain
E3E15_RS04685	PF00772	DnaB-like helicase N terminal domain
E3E15_RS04690	PF01281	Ribosomal protein L9, N-terminal domain
E3E15_RS04690	PF03948	Ribosomal protein L9, C-terminal domain
E3E15_RS04695	PF01084	Ribosomal protein S18
E3E15_RS04700	PF01250	Ribosomal protein S6
E3E15_RS04705	PF01218	Coproporphyrinogen III oxidase
E3E15_RS04715	PF00266	Aminotransferase class-V
E3E15_RS04720	PF02224	Cytidylate kinase
E3E15_RS04750	PF01112	Asparaginase
E3E15_RS04755	PF03575	Peptidase family S51
E3E15_RS04760	PF00294	pfkB family carbohydrate kinase
E3E15_RS04770	PF00834	Ribulose-phosphate 3 epimerase family
E3E15_RS04775	PF00571	CBS domain
E3E15_RS04775	PF01380	SIS domain
E3E15_RS04785	PF03641	Possible lysine decarboxylase
E3E15_RS04800	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
E3E15_RS04805	PF02592	Putative vitamin uptake transporter
E3E15_RS04810	PF01926	50S ribosome-binding GTPase
E3E15_RS04815	PF01451	Low molecular weight phosphotyrosine protein phosphatase
E3E15_RS04820	PF01145	SPFH domain / Band 7 family
E3E15_RS04825	PF01145	SPFH domain / Band 7 family
E3E15_RS04830	PF13167	GTP-binding GTPase N-terminal
E3E15_RS04830	PF16360	GTP-binding GTPase Middle Region
E3E15_RS04830	PF01926	50S ribosome-binding GTPase
E3E15_RS04835	PF17209	Hfq protein
E3E15_RS04850	PF00216	Bacterial DNA-binding protein
E3E15_RS04855	PF00004	ATPase family associated with various cellular activities (AAA)
E3E15_RS04855	PF05362	Lon protease (S16) C-terminal proteolytic domain
E3E15_RS04855	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
E3E15_RS04860	PF06689	ClpX C4-type zinc finger
E3E15_RS04860	PF10431	C-terminal, D2-small domain, of ClpB protein 
E3E15_RS04860	PF07724	AAA domain (Cdc48 subfamily)
E3E15_RS04865	PF00574	Clp protease
E3E15_RS04870	PF05697	Bacterial trigger factor protein (TF)
E3E15_RS04870	PF05698	Bacterial trigger factor protein (TF) C-terminus
E3E15_RS04870	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
E3E15_RS04880	PF00484	Carbonic anhydrase
E3E15_RS04885	PF00710	Asparaginase, N-terminal
E3E15_RS04885	PF17763	Glutaminase/Asparaginase C-terminal domain
E3E15_RS04890	PF00075	RNase H
E3E15_RS04900	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
E3E15_RS04905	PF04542	Sigma-70 region 2 
E3E15_RS04905	PF04545	Sigma-70, region 4
E3E15_RS04905	PF00140	Sigma-70 factor, region 1.2
E3E15_RS04915	PF07549	SecD/SecF GG Motif
E3E15_RS04915	PF02355	Protein export membrane protein
E3E15_RS04920	PF02355	Protein export membrane protein
E3E15_RS04920	PF13721	SecD export protein N-terminal TM region
E3E15_RS04920	PF07549	SecD/SecF GG Motif
E3E15_RS04925	PF02699	Preprotein translocase subunit
E3E15_RS04935	PF01702	Queuine tRNA-ribosyltransferase
E3E15_RS04940	PF02660	Glycerol-3-phosphate acyltransferase
E3E15_RS04945	PF00005	ABC transporter
E3E15_RS04945	PF09383	NIL domain
E3E15_RS04950	PF03180	NLPA lipoprotein
E3E15_RS04960	PF02542	YgbB family
E3E15_RS04970	PF08245	Mur ligase middle domain
E3E15_RS04970	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
E3E15_RS04970	PF02875	Mur ligase family, glutamate ligase domain
E3E15_RS04975	PF08245	Mur ligase middle domain
E3E15_RS04975	PF02875	Mur ligase family, glutamate ligase domain
E3E15_RS04975	PF08443	RimK-like ATP-grasp domain
E3E15_RS04980	PF18146	Damage-inducible protein CinA KH domain
E3E15_RS04980	PF02464	Competence-damaged protein
E3E15_RS04980	PF00994	Probable molybdopterin binding domain
E3E15_RS04985	PF03009	Glycerophosphoryl diester phosphodiesterase family
E3E15_RS04990	PF00437	Type II/IV secretion system protein
E3E15_RS04990	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
E3E15_RS04995	PF00482	Type II secretion system (T2SS), protein F
E3E15_RS05015	PF03601	Conserved hypothetical protein 698
E3E15_RS05020	PF00459	Inositol monophosphatase family
E3E15_RS05025	PF01029	NusB family
E3E15_RS05025	PF01189	16S rRNA methyltransferase RsmB/F
E3E15_RS05065	PF00155	Aminotransferase class I and II
E3E15_RS05070	PF00107	Zinc-binding dehydrogenase
E3E15_RS05070	PF08240	Alcohol dehydrogenase GroES-like domain
E3E15_RS05075	PF03222	Tryptophan/tyrosine permease family
E3E15_RS05080	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
E3E15_RS05085	PF04977	Septum formation initiator
E3E15_RS05090	PF00113	Enolase, C-terminal TIM barrel domain
E3E15_RS05090	PF03952	Enolase, N-terminal domain
E3E15_RS05100	PF04973	Nicotinamide mononucleotide transporter
E3E15_RS05105	PF05958	tRNA (Uracil-5-)-methyltransferase
E3E15_RS05115	PF01192	RNA polymerase Rpb6 
E3E15_RS05120	PF00485	Phosphoribulokinase / Uridine kinase family
E3E15_RS05125	PF00793	DAHP synthetase I family
E3E15_RS05130	PF01521	Iron-sulphur cluster biosynthesis
E3E15_RS05135	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
E3E15_RS05135	PF00013	KH domain
E3E15_RS05135	PF01138	3' exoribonuclease family, domain 1
E3E15_RS05135	PF03725	3' exoribonuclease family, domain 2
E3E15_RS05135	PF00575	S1 RNA binding domain
E3E15_RS05140	PF00312	Ribosomal protein S15
E3E15_RS05145	PF00905	Penicillin binding protein transpeptidase domain
E3E15_RS05145	PF03717	Penicillin-binding Protein dimerisation domain
E3E15_RS05150	PF04999	Cell division protein FtsL
E3E15_RS05155	PF01795	MraW methylase family
E3E15_RS05160	PF01553	Acyltransferase
E3E15_RS05160	PF00501	AMP-binding enzyme
E3E15_RS05160	PF13193	AMP-binding enzyme C-terminal domain
E3E15_RS05165	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
E3E15_RS05165	PF06827	Zinc finger found in FPG and IleRS
E3E15_RS05165	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
E3E15_RS05180	PF00872	Transposase, Mutator family
E3E15_RS05190	PF07992	Pyridine nucleotide-disulphide oxidoreductase
E3E15_RS05200	PF03932	CutC family
E3E15_RS05210	PF00549	CoA-ligase
E3E15_RS05210	PF02629	CoA binding domain
E3E15_RS05215	PF08442	ATP-grasp domain
E3E15_RS05215	PF00549	CoA-ligase
E3E15_RS05225	PF01207	Dihydrouridine synthase (Dus)
E3E15_RS05235	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
E3E15_RS05235	PF01751	Toprim domain
E3E15_RS05235	PF18053	DNA gyrase B subunit insert domain
E3E15_RS05235	PF00986	DNA gyrase B subunit, carboxyl terminus
E3E15_RS05235	PF00204	DNA gyrase B
E3E15_RS05245	PF00872	Transposase, Mutator family
E3E15_RS05250	PF01119	DNA mismatch repair protein, C-terminal domain
E3E15_RS05250	PF08676	MutL C terminal dimerisation domain
E3E15_RS05260	PF03193	RsgA GTPase
E3E15_RS05265	PF03485	Arginyl tRNA synthetase N terminal domain
E3E15_RS05265	PF05746	DALR anticodon binding domain
E3E15_RS05265	PF00750	tRNA synthetases class I (R)
E3E15_RS05270	PF03968	OstA-like protein
E3E15_RS05270	PF04453	LPS transport system D
E3E15_RS05275	PF00639	PPIC-type PPIASE domain
E3E15_RS05275	PF09312	SurA N-terminal domain
E3E15_RS05280	PF00398	Ribosomal RNA adenine dimethylase
E3E15_RS05285	PF00149	Calcineurin-like phosphoesterase
E3E15_RS05290	PF01220	Dehydroquinase class II
E3E15_RS05295	PF00364	Biotin-requiring enzyme
E3E15_RS05300	PF00289	Biotin carboxylase, N-terminal domain
E3E15_RS05300	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
E3E15_RS05300	PF02785	Biotin carboxylase C-terminal domain
E3E15_RS05310	PF00152	tRNA synthetases class II (D, K and N) 
E3E15_RS05320	PF17768	RecJ OB domain
E3E15_RS05320	PF01368	DHH family
E3E15_RS05320	PF02272	DHHA1 domain
E3E15_RS05325	PF01594	AI-2E family transporter
E3E15_RS05330	PF13520	Amino acid permease
E3E15_RS05335	PF13416	Bacterial extracellular solute-binding protein
E3E15_RS05350	PF00501	AMP-binding enzyme
E3E15_RS05350	PF16177	Acetyl-coenzyme A synthetase N-terminus
E3E15_RS05350	PF13193	AMP-binding enzyme C-terminal domain
E3E15_RS05355	PF00588	SpoU rRNA Methylase family
E3E15_RS05360	PF00490	Delta-aminolevulinic acid dehydratase
E3E15_RS05365	PF01985	CRS1 / YhbY (CRM) domain
E3E15_RS05370	PF09115	DNA polymerase III, delta subunit, C terminal
E3E15_RS05375	PF08496	Peptidase family S49 N-terminal
E3E15_RS05375	PF01343	Peptidase family S49
E3E15_RS05380	PF00043	Glutathione S-transferase, C-terminal domain
E3E15_RS05380	PF02798	Glutathione S-transferase, N-terminal domain
E3E15_RS05385	PF04358	DsrC like protein
E3E15_RS05390	PF04362	Bacterial Fe(2+) trafficking
E3E15_RS05400	PF01569	PAP2 superfamily
E3E15_RS05425	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
E3E15_RS05425	PF02222	ATP-grasp domain
E3E15_RS05430	PF00731	AIR carboxylase
E3E15_RS05435	PF00551	Formyl transferase
E3E15_RS05440	PF01259	SAICAR synthetase
E3E15_RS05445	PF02769	AIR synthase related protein, C-terminal domain
E3E15_RS05445	PF00586	AIR synthase related protein, N-terminal domain
E3E15_RS05450	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
E3E15_RS05450	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
E3E15_RS05460	PF07963	Prokaryotic N-terminal methylation motif
E3E15_RS05460	PF00114	Pilin (bacterial filament)
E3E15_RS05465	PF01050	Mannose-6-phosphate isomerase
E3E15_RS05465	PF00483	Nucleotidyl transferase
E3E15_RS05470	PF00080	Copper/zinc superoxide dismutase (SODC)
E3E15_RS05475	PF01264	Chorismate synthase
E3E15_RS05480	PF09335	SNARE associated Golgi protein
E3E15_RS05490	PF18073	Rubredoxin metal binding domain
E3E15_RS05500	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
E3E15_RS05500	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
E3E15_RS05505	PF00403	Heavy-metal-associated domain
E3E15_RS05510	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
E3E15_RS05510	PF03466	LysR substrate binding domain
E3E15_RS05520	PF01435	Peptidase family M48
E3E15_RS05530	PF01138	3' exoribonuclease family, domain 1
E3E15_RS05530	PF03725	3' exoribonuclease family, domain 2
E3E15_RS05540	PF01040	UbiA prenyltransferase family
E3E15_RS05555	PF06769	YoeB-like toxin of bacterial type II toxin-antitoxin system
E3E15_RS05560	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
E3E15_RS05565	PF02661	Fic/DOC family
E3E15_RS05565	PF13784	Fic/DOC family N-terminal
E3E15_RS05580	PF02796	Helix-turn-helix domain of resolvase
E3E15_RS05580	PF00239	Resolvase, N terminal domain
E3E15_RS05620	PF01050	Mannose-6-phosphate isomerase
E3E15_RS05620	PF00483	Nucleotidyl transferase
E3E15_RS05630	PF00535	Glycosyl transferase family 2
E3E15_RS05635	PF00535	Glycosyl transferase family 2
E3E15_RS05645	PF16363	GDP-mannose 4,6 dehydratase
E3E15_RS05650	PF01370	NAD dependent epimerase/dehydratase family
E3E15_RS05655	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
E3E15_RS05660	PF16363	GDP-mannose 4,6 dehydratase
E3E15_RS05665	PF00483	Nucleotidyl transferase
E3E15_RS05670	PF01370	NAD dependent epimerase/dehydratase family
E3E15_RS05675	PF16363	GDP-mannose 4,6 dehydratase
E3E15_RS05680	PF00534	Glycosyl transferases group 1
E3E15_RS05690	PF02350	UDP-N-acetylglucosamine 2-epimerase
E3E15_RS05705	PF02719	Polysaccharide biosynthesis protein
E3E15_RS05705	PF08485	Polysaccharide biosynthesis protein C-terminal
E3E15_RS05735	PF00270	DEAD/DEAH box helicase
E3E15_RS05735	PF13749	Putative ATP-dependent DNA helicase recG C-terminal
E3E15_RS05735	PF17191	RecG wedge domain
E3E15_RS05740	PF02397	Bacterial sugar transferase
E3E15_RS05750	PF02719	Polysaccharide biosynthesis protein
E3E15_RS05755	PF11898	Domain of unknown function (DUF3418)
E3E15_RS05755	PF00270	DEAD/DEAH box helicase
E3E15_RS05755	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
E3E15_RS05755	PF04408	Helicase associated domain (HA2)
E3E15_RS05755	PF00271	Helicase conserved C-terminal domain
E3E15_RS05765	PF03971	Monomeric isocitrate dehydrogenase
E3E15_RS05775	PF00588	SpoU rRNA Methylase family
E3E15_RS05775	PF08032	RNA 2'-O ribose methyltransferase substrate binding
E3E15_RS05780	PF01225	Mur ligase family, catalytic domain
E3E15_RS05780	PF08245	Mur ligase middle domain
E3E15_RS05780	PF02875	Mur ligase family, glutamate ligase domain
E3E15_RS05790	PF00156	Phosphoribosyl transferase domain
E3E15_RS05795	PF00149	Calcineurin-like phosphoesterase
E3E15_RS05800	PF00872	Transposase, Mutator family
E3E15_RS05805	PF02875	Mur ligase family, glutamate ligase domain
E3E15_RS05805	PF01225	Mur ligase family, catalytic domain
E3E15_RS05805	PF08245	Mur ligase middle domain
E3E15_RS05820	PF00749	tRNA synthetases class I (E and Q), catalytic domain
E3E15_RS05820	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
E3E15_RS05825	PF01293	Phosphoenolpyruvate carboxykinase
E3E15_RS05830	PF00109	Beta-ketoacyl synthase, N-terminal domain
E3E15_RS05830	PF02801	Beta-ketoacyl synthase, C-terminal domain
E3E15_RS05835	PF00550	Phosphopantetheine attachment site
E3E15_RS05845	PF00698	Acyl transferase domain
E3E15_RS05850	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
E3E15_RS05850	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
E3E15_RS05855	PF02504	Fatty acid synthesis protein
E3E15_RS05860	PF01783	Ribosomal L32p protein family
E3E15_RS05870	PF02780	Transketolase, C-terminal domain
E3E15_RS05870	PF02779	Transketolase, pyrimidine binding domain
E3E15_RS05870	PF00456	Transketolase, thiamine diphosphate binding domain
E3E15_RS05875	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
E3E15_RS05875	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
E3E15_RS05880	PF00162	Phosphoglycerate kinase
E3E15_RS05885	PF02887	Pyruvate kinase, alpha/beta domain
E3E15_RS05885	PF00224	Pyruvate kinase, barrel domain
E3E15_RS05890	PF01116	Fructose-bisphosphate aldolase class-II
E3E15_RS05895	PF13525	Outer membrane lipoprotein
E3E15_RS05900	PF01479	S4 domain
E3E15_RS05900	PF00849	RNA pseudouridylate synthase
E3E15_RS05905	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
E3E15_RS05910	PF02405	Permease MlaE
E3E15_RS05915	PF00005	ABC transporter
E3E15_RS05935	PF04452	RNA methyltransferase
E3E15_RS05940	PF00854	POT family
E3E15_RS05945	PF00854	POT family
E3E15_RS05950	PF00501	AMP-binding enzyme
E3E15_RS05950	PF13193	AMP-binding enzyme C-terminal domain
E3E15_RS05955	PF07690	Major Facilitator Superfamily
E3E15_RS05960	PF00529	HlyD membrane-fusion protein of T1SS
E3E15_RS05960	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
E3E15_RS05965	PF02321	Outer membrane efflux protein
E3E15_RS05980	PF02540	NAD synthase
E3E15_RS05985	PF00226	DnaJ domain
E3E15_RS05985	PF01556	DnaJ C terminal domain
E3E15_RS05985	PF00684	DnaJ central domain
E3E15_RS05990	PF00012	Hsp70 protein
E3E15_RS05995	PF01025	GrpE
E3E15_RS06010	PF00572	Ribosomal protein L13
E3E15_RS06015	PF00380	Ribosomal protein S9/S16
E3E15_RS06030	PF01351	Ribonuclease HII
E3E15_RS06035	PF00588	SpoU rRNA Methylase family
E3E15_RS06045	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
E3E15_RS06055	PF01926	50S ribosome-binding GTPase
E3E15_RS06055	PF12631	MnmE helical domain
E3E15_RS06055	PF10396	GTP-binding protein TrmE N-terminus
E3E15_RS06085	PF01381	Helix-turn-helix
E3E15_RS06090	PF05015	RelE-like toxin of type II toxin-antitoxin system HigB
E3E15_RS06095	PF00291	Pyridoxal-phosphate dependent enzyme
E3E15_RS06105	PF02600	Disulfide bond formation protein DsbB
E3E15_RS06160	PF05139	Erythromycin esterase
E3E15_RS06160	PF00156	Phosphoribosyl transferase domain
E3E15_RS06165	PF00156	Phosphoribosyl transferase domain
E3E15_RS06165	PF01738	Dienelactone hydrolase family
E3E15_RS06175	PF01588	Putative tRNA binding domain
E3E15_RS06175	PF08264	Anticodon-binding domain of tRNA
E3E15_RS06175	PF09334	tRNA synthetases class I (M)
E3E15_RS06180	PF07690	Major Facilitator Superfamily
E3E15_RS06185	PF01300	Telomere recombination
E3E15_RS06190	PF04279	Intracellular septation protein A 
E3E15_RS06195	PF02685	Glucokinase
E3E15_RS06200	PF01209	ubiE/COQ5 methyltransferase family
E3E15_RS06210	PF03109	ABC1 family
E3E15_RS06215	PF01230	HIT domain
E3E15_RS06220	PF00156	Phosphoribosyl transferase domain
E3E15_RS06225	PF13847	Methyltransferase domain
E3E15_RS06235	PF01565	FAD binding domain 
E3E15_RS06235	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
E3E15_RS06240	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
E3E15_RS06245	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
E3E15_RS06245	PF01926	50S ribosome-binding GTPase
E3E15_RS06265	PF03949	Malic enzyme, NAD binding domain
E3E15_RS06265	PF00390	Malic enzyme, N-terminal domain
E3E15_RS06270	PF06574	FAD synthetase
E3E15_RS06270	PF01687	Riboflavin kinase
E3E15_RS06275	PF08264	Anticodon-binding domain of tRNA
E3E15_RS06275	PF00133	tRNA synthetases class I (I, L, M and V)
E3E15_RS06275	PF06827	Zinc finger found in FPG and IleRS
E3E15_RS06280	PF01252	Signal peptidase (SPase) II
E3E15_RS06300	PF01728	FtsJ-like methyltransferase
E3E15_RS06310	PF02540	NAD synthase
E3E15_RS06310	PF00117	Glutamine amidotransferase class-I
E3E15_RS06310	PF00958	GMP synthase C terminal domain
E3E15_RS06315	PF02195	ParB-like nuclease domain
E3E15_RS06315	PF17762	HTH domain found in ParB protein
E3E15_RS06320	PF13614	AAA domain
E3E15_RS06325	PF01131	DNA topoisomerase
E3E15_RS06325	PF01751	Toprim domain
E3E15_RS06325	PF13368	Topoisomerase C-terminal repeat
E3E15_RS06345	PF04430	Protein of unknown function (DUF498/DUF598)
E3E15_RS06350	PF01432	Peptidase family M3
E3E15_RS06355	PF02021	Uncharacterised protein family UPF0102
E3E15_RS06370	PF13847	Methyltransferase domain
E3E15_RS06370	PF17827	PrmC N-terminal domain
E3E15_RS06375	PF03462	PCRF domain
E3E15_RS06375	PF00472	RF-1 domain
E3E15_RS06380	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
E3E15_RS06380	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
E3E15_RS06380	PF01488	Shikimate / quinate 5-dehydrogenase
E3E15_RS06390	PF13360	PQQ-like domain
E3E15_RS06395	PF07690	Major Facilitator Superfamily
E3E15_RS06400	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
E3E15_RS06400	PF00986	DNA gyrase B subunit, carboxyl terminus
E3E15_RS06400	PF00204	DNA gyrase B
E3E15_RS06400	PF01751	Toprim domain
E3E15_RS06410	PF01510	N-acetylmuramoyl-L-alanine amidase
E3E15_RS06425	PF00293	NUDIX domain
E3E15_RS06430	PF14226	non-haem dioxygenase in morphine synthesis N-terminal
E3E15_RS06430	PF03171	2OG-Fe(II) oxygenase superfamily
E3E15_RS06435	PF02899	Phage integrase, N-terminal SAM-like domain
E3E15_RS06435	PF00589	Phage integrase family
E3E15_RS06440	PF01245	Ribosomal protein L19
E3E15_RS06445	PF01746	tRNA (Guanine-1)-methyltransferase
E3E15_RS06450	PF01782	RimM N-terminal domain
E3E15_RS06450	PF05239	PRC-barrel domain
E3E15_RS06455	PF00886	Ribosomal protein S16
E3E15_RS06460	PF02772	S-adenosylmethionine synthetase, central domain
E3E15_RS06460	PF00438	S-adenosylmethionine synthetase, N-terminal domain
E3E15_RS06460	PF02773	S-adenosylmethionine synthetase, C-terminal domain
E3E15_RS06470	PF00814	Glycoprotease family
E3E15_RS06480	PF04997	RNA polymerase Rpb1, domain 1
E3E15_RS06480	PF00623	RNA polymerase Rpb1, domain 2
E3E15_RS06480	PF04983	RNA polymerase Rpb1, domain 3
E3E15_RS06480	PF04998	RNA polymerase Rpb1, domain 5
E3E15_RS06480	PF05000	RNA polymerase Rpb1, domain 4
E3E15_RS06485	PF04565	RNA polymerase Rpb2, domain 3
E3E15_RS06485	PF04563	RNA polymerase beta subunit
E3E15_RS06485	PF04561	RNA polymerase Rpb2, domain 2
E3E15_RS06485	PF10385	RNA polymerase beta subunit external 1 domain
E3E15_RS06485	PF04560	RNA polymerase Rpb2, domain 7
E3E15_RS06485	PF00562	RNA polymerase Rpb2, domain 6
E3E15_RS06490	PF16320	Ribosomal protein L7/L12 dimerisation domain
E3E15_RS06490	PF00542	Ribosomal protein L7/L12 C-terminal domain
E3E15_RS06495	PF00466	Ribosomal protein L10
E3E15_RS06500	PF00687	Ribosomal protein L1p/L10e family
E3E15_RS06505	PF00298	Ribosomal protein L11, RNA binding domain
E3E15_RS06505	PF03946	Ribosomal protein L11, N-terminal domain
E3E15_RS06510	PF00467	KOW motif
E3E15_RS06510	PF02357	Transcription termination factor nusG
E3E15_RS06515	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
E3E15_RS06525	PF00009	Elongation factor Tu GTP binding domain
E3E15_RS06525	PF03144	Elongation factor Tu domain 2
E3E15_RS06525	PF03143	Elongation factor Tu C-terminal domain
E3E15_RS06555	PF00230	Major intrinsic protein
E3E15_RS06560	PF01266	FAD dependent oxidoreductase
E3E15_RS06560	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
E3E15_RS06565	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
E3E15_RS06565	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
E3E15_RS06575	PF13361	UvrD-like helicase C-terminal domain
E3E15_RS06575	PF00580	UvrD/REP helicase N-terminal domain
E3E15_RS06580	PF00448	SRP54-type protein, GTPase domain
E3E15_RS06580	PF02881	SRP54-type protein, helical bundle domain
E3E15_RS06590	PF00009	Elongation factor Tu GTP binding domain
E3E15_RS06590	PF03144	Elongation factor Tu domain 2
E3E15_RS06590	PF16658	Class II release factor RF3, C-terminal domain
E3E15_RS06595	PF02223	Thymidylate kinase
E3E15_RS06600	PF07670	Nucleoside recognition
E3E15_RS06600	PF01773	Na+ dependent nucleoside transporter N-terminus
E3E15_RS06600	PF07662	Na+ dependent nucleoside transporter C-terminus
E3E15_RS06605	PF01791	DeoC/LacD family aldolase
E3E15_RS06610	PF01676	Metalloenzyme superfamily
E3E15_RS06615	PF03309	Type III pantothenate kinase
E3E15_RS06620	PF00476	DNA polymerase family A
E3E15_RS06620	PF01612	3'-5' exonuclease
E3E15_RS06620	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
E3E15_RS06620	PF01367	5'-3' exonuclease, C-terminal SAM fold
E3E15_RS06625	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
E3E15_RS06630	PF00005	ABC transporter
E3E15_RS06630	PF00664	ABC transporter transmembrane region
E3E15_RS06635	PF01743	Poly A polymerase head domain
E3E15_RS06635	PF12627	Probable RNA and SrmB- binding site of polymerase A
E3E15_RS06640	PF02600	Disulfide bond formation protein DsbB
E3E15_RS06645	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
E3E15_RS06650	PF00873	AcrB/AcrD/AcrF family
E3E15_RS06680	PF03883	Peroxide stress protein YaaA
E3E15_RS06685	PF02590	Predicted SPOUT methyltransferase
E3E15_RS06700	PF02796	Helix-turn-helix domain of resolvase
E3E15_RS06700	PF00239	Resolvase, N terminal domain
E3E15_RS06710	PF05175	Methyltransferase small domain
E3E15_RS06715	PF01406	tRNA synthetases class I (C) catalytic domain
E3E15_RS06715	PF09190	DALR domain
E3E15_RS06745	PF00474	Sodium:solute symporter family
E3E15_RS06750	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
E3E15_RS06755	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
E3E15_RS06760	PF00324	Amino acid permease
E3E15_RS06765	PF01569	PAP2 superfamily
E3E15_RS06770	PF17854	FtsK alpha domain
E3E15_RS06770	PF09397	Ftsk gamma domain
E3E15_RS06770	PF01580	FtsK/SpoIIIE family
E3E15_RS06770	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
E3E15_RS06775	PF03548	Outer membrane lipoprotein carrier protein LolA
E3E15_RS06790	PF02386	Cation transport protein
E3E15_RS06820	PF00872	Transposase, Mutator family
E3E15_RS06835	PF00667	FAD binding domain
E3E15_RS06835	PF00258	Flavodoxin
E3E15_RS06835	PF00175	Oxidoreductase NAD-binding domain 
E3E15_RS06840	PF01197	Ribosomal protein L31
E3E15_RS06845	PF04262	Glutamate-cysteine ligase 
E3E15_RS06850	PF03023	Lipid II flippase MurJ
E3E15_RS06860	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
E3E15_RS06865	PF08245	Mur ligase middle domain
E3E15_RS06870	PF01039	Carboxyl transferase domain
E3E15_RS06870	PF17848	Acetyl-coA carboxylase zinc finger domain
E3E15_RS06875	PF00334	Nucleoside diphosphate kinase
E3E15_RS06880	PF06418	CTP synthase N-terminus
E3E15_RS06880	PF00117	Glutamine amidotransferase class-I
E3E15_RS06890	PF00183	Hsp90 protein
E3E15_RS06895	PF01196	Ribosomal protein L17
E3E15_RS06900	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
E3E15_RS06900	PF01000	RNA polymerase Rpb3/RpoA insert domain
E3E15_RS06900	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
E3E15_RS06905	PF01479	S4 domain
E3E15_RS06905	PF00163	Ribosomal protein S4/S9 N-terminal domain
E3E15_RS06910	PF00411	Ribosomal protein S11
E3E15_RS06915	PF00416	Ribosomal protein S13/S18
E3E15_RS06920	PF00444	Ribosomal protein L36
E3E15_RS06925	PF00344	SecY translocase
E3E15_RS06930	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
E3E15_RS06935	PF00327	Ribosomal protein L30p/L7e
E3E15_RS06940	PF00333	Ribosomal protein S5, N-terminal domain
E3E15_RS06940	PF03719	Ribosomal protein S5, C-terminal domain
E3E15_RS06945	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
E3E15_RS06950	PF00347	Ribosomal protein L6
E3E15_RS06955	PF00410	Ribosomal protein S8
E3E15_RS06960	PF00253	Ribosomal protein S14p/S29e
E3E15_RS06965	PF00673	ribosomal L5P family C-terminus
E3E15_RS06965	PF00281	Ribosomal protein L5
E3E15_RS06970	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
E3E15_RS06975	PF00238	Ribosomal protein L14p/L23e
E3E15_RS06980	PF00366	Ribosomal protein S17
E3E15_RS06985	PF00831	Ribosomal L29 protein
E3E15_RS06990	PF00252	Ribosomal protein L16p/L10e
E3E15_RS06995	PF07650	KH domain
E3E15_RS06995	PF00189	Ribosomal protein S3, C-terminal domain
E3E15_RS07000	PF00237	Ribosomal protein L22p/L17e
E3E15_RS07005	PF00203	Ribosomal protein S19
E3E15_RS07010	PF03947	Ribosomal Proteins L2, C-terminal domain
E3E15_RS07010	PF00181	Ribosomal Proteins L2, RNA binding domain
E3E15_RS07015	PF00276	Ribosomal protein L23
E3E15_RS07020	PF00573	Ribosomal protein L4/L1 family
E3E15_RS07025	PF00297	Ribosomal protein L3
E3E15_RS07030	PF00338	Ribosomal protein S10p/S20e
E3E15_RS07035	PF03144	Elongation factor Tu domain 2
E3E15_RS07035	PF00009	Elongation factor Tu GTP binding domain
E3E15_RS07035	PF03764	Elongation factor G, domain IV
E3E15_RS07035	PF14492	Elongation Factor G, domain II
E3E15_RS07035	PF00679	Elongation factor G C-terminus
E3E15_RS07040	PF00177	Ribosomal protein S7p/S5e
E3E15_RS07045	PF00164	Ribosomal protein S12/S23
E3E15_RS07050	PF01066	CDP-alcohol phosphatidyltransferase
E3E15_RS07055	PF00692	dUTPase
E3E15_RS07065	PF01255	Putative undecaprenyl diphosphate synthase
E3E15_RS07070	PF01765	Ribosome recycling factor
E3E15_RS07075	PF00696	Amino acid kinase family
E3E15_RS07080	PF00889	Elongation factor TS
E3E15_RS07085	PF00318	Ribosomal protein S2
E3E15_RS07090	PF00186	Dihydrofolate reductase
E3E15_RS07095	PF07690	Major Facilitator Superfamily
E3E15_RS07100	PF01654	Cytochrome bd terminal oxidase subunit I
E3E15_RS07105	PF02322	Cytochrome bd terminal oxidase subunit II
E3E15_RS07125	PF00872	Transposase, Mutator family
E3E15_RS07150	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
E3E15_RS07150	PF18074	Primosomal protein N C-terminal domain
E3E15_RS07150	PF17764	3′ DNA-binding domain (3′BD)
E3E15_RS07150	PF00271	Helicase conserved C-terminal domain
E3E15_RS07150	PF00270	DEAD/DEAH box helicase
E3E15_RS07160	PF03631	Virulence factor BrkB
E3E15_RS07165	PF03358	NADPH-dependent FMN reductase
E3E15_RS07185	PF00005	ABC transporter
E3E15_RS07185	PF08402	TOBE domain
E3E15_RS07190	PF00950	ABC 3 transport family
E3E15_RS07195	PF01494	FAD binding domain
E3E15_RS07200	PF00156	Phosphoribosyl transferase domain
E3E15_RS07205	PF00709	Adenylosuccinate synthetase
E3E15_RS07210	PF02142	MGS-like domain
E3E15_RS07210	PF01808	AICARFT/IMPCHase bienzyme
E3E15_RS07245	PF00005	ABC transporter
E3E15_RS07245	PF12848	ABC transporter
E3E15_RS07250	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
E3E15_RS07250	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
E3E15_RS07255	PF00083	Sugar (and other) transporter
E3E15_RS07255	PF08946	Osmosensory transporter coiled coil
E3E15_RS07260	PF00581	Rhodanese-like domain
E3E15_RS07265	PF02556	Preprotein translocase subunit SecB
E3E15_RS07270	PF00154	recA bacterial DNA recombination protein
E3E15_RS07280	PF00436	Single-strand binding protein family
E3E15_RS07285	PF00872	Transposase, Mutator family
E3E15_RS07295	PF00871	Acetokinase family
E3E15_RS07300	PF07085	DRTGG domain
E3E15_RS07300	PF01515	Phosphate acetyl/butaryl transferase
E3E15_RS07305	PF00171	Aldehyde dehydrogenase family
E3E15_RS07325	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
E3E15_RS07330	PF01225	Mur ligase family, catalytic domain
E3E15_RS07330	PF02875	Mur ligase family, glutamate ligase domain
E3E15_RS07330	PF08245	Mur ligase middle domain
E3E15_RS07335	PF01488	Shikimate / quinate 5-dehydrogenase
E3E15_RS07335	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
E3E15_RS07335	PF08501	Shikimate dehydrogenase substrate binding domain
E3E15_RS07380	PF00218	Indole-3-glycerol phosphate synthase
E3E15_RS07380	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
E3E15_RS07385	PF01979	Amidohydrolase family
E3E15_RS07390	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
E3E15_RS07395	PF01180	Dihydroorotate dehydrogenase
E3E15_RS07405	PF00872	Transposase, Mutator family
E3E15_RS07480	PF02153	Prephenate dehydrogenase
E3E15_RS07480	PF01817	Chorismate mutase type II
E3E15_RS07485	PF02580	D-Tyr-tRNA(Tyr) deacylase
E3E15_RS07500	PF11953	Domain of unknown function (DUF3470)
E3E15_RS07500	PF00037	4Fe-4S binding domain
E3E15_RS07515	PF03372	Endonuclease/Exonuclease/phosphatase family
E3E15_RS07520	PF06965	Na+/H+ antiporter 1
E3E15_RS07525	PF00872	Transposase, Mutator family
E3E15_RS07535	PF01343	Peptidase family S49
E3E15_RS07535	PF06965	Na+/H+ antiporter 1
E3E15_RS07545	PF01872	RibD C-terminal domain
E3E15_RS07545	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
E3E15_RS07550	PF00677	Lumazine binding domain
E3E15_RS07555	PF00925	GTP cyclohydrolase II
E3E15_RS07555	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
E3E15_RS07560	PF00885	6,7-dimethyl-8-ribityllumazine synthase
E3E15_RS07565	PF01327	Polypeptide deformylase
E3E15_RS07580	PF08543	Phosphomethylpyrimidine kinase
E3E15_RS07590	PF00132	Bacterial transferase hexapeptide (six repeats)
E3E15_RS07590	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
E3E15_RS07600	PF01040	UbiA prenyltransferase family
E3E15_RS07605	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
E3E15_RS07610	PF00510	Cytochrome c oxidase subunit III
E3E15_RS07615	PF00115	Cytochrome C and Quinol oxidase polypeptide I
E3E15_RS07620	PF06481	COX Aromatic Rich Motif
E3E15_RS07620	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
E3E15_RS07630	PF03840	Preprotein translocase SecG subunit
E3E15_RS07635	PF00121	Triosephosphate isomerase
E3E15_RS07640	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
E3E15_RS07640	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
E3E15_RS07640	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
E3E15_RS07640	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
E3E15_RS07645	PF00156	Phosphoribosyl transferase domain
E3E15_RS07650	PF02817	e3 binding domain
E3E15_RS07650	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
E3E15_RS07650	PF00364	Biotin-requiring enzyme
E3E15_RS07655	PF16870	2-oxoglutarate dehydrogenase C-terminal
E3E15_RS07655	PF00676	Dehydrogenase E1 component
E3E15_RS07655	PF16078	2-oxoglutarate dehydrogenase N-terminus
E3E15_RS07655	PF02779	Transketolase, pyrimidine binding domain
E3E15_RS07660	PF13085	2Fe-2S iron-sulfur cluster binding domain
E3E15_RS07665	PF02910	Fumarate reductase flavoprotein C-term
E3E15_RS07665	PF00890	FAD binding domain
E3E15_RS07670	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
E3E15_RS07675	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
E3E15_RS07680	PF00285	Citrate synthase, C-terminal domain
E3E15_RS07685	PF07690	Major Facilitator Superfamily
E3E15_RS07690	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
E3E15_RS07690	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
E3E15_RS07695	PF00462	Glutaredoxin
E3E15_RS07705	PF01336	OB-fold nucleic acid binding domain
E3E15_RS07705	PF00152	tRNA synthetases class II (D, K and N) 
E3E15_RS07715	PF00881	Nitroreductase family
E3E15_RS07735	PF01384	Phosphate transporter family
E3E15_RS07750	PF03746	LamB/YcsF family
E3E15_RS07760	PF07690	Major Facilitator Superfamily
E3E15_RS07765	PF00872	Transposase, Mutator family
E3E15_RS07770	PF00582	Universal stress protein family
E3E15_RS07775	PF00679	Elongation factor G C-terminus
E3E15_RS07775	PF00009	Elongation factor Tu GTP binding domain
E3E15_RS07775	PF03144	Elongation factor Tu domain 2
E3E15_RS07775	PF06421	GTP-binding protein LepA C-terminus
E3E15_RS07785	PF07726	ATPase family associated with various cellular activities (AAA)
E3E15_RS07785	PF17863	AAA lid domain
E3E15_RS07790	PF01882	Protein of unknown function DUF58
E3E15_RS07805	PF00092	von Willebrand factor type A domain
E3E15_RS07805	PF07584	Aerotolerance regulator N-terminal
E3E15_RS07835	PF10458	Valyl tRNA synthetase tRNA binding arm
E3E15_RS07835	PF08264	Anticodon-binding domain of tRNA
E3E15_RS07835	PF00133	tRNA synthetases class I (I, L, M and V)
E3E15_RS07840	PF00872	Transposase, Mutator family
E3E15_RS07845	PF00591	Glycosyl transferase family, a/b domain
E3E15_RS07845	PF02885	Glycosyl transferase family, helical bundle domain
E3E15_RS07850	PF00117	Glutamine amidotransferase class-I
E3E15_RS07855	PF00425	chorismate binding enzyme
E3E15_RS07855	PF04715	Anthranilate synthase component I, N terminal region
E3E15_RS07875	PF10150	Ribonuclease E/G family
E3E15_RS07875	PF00575	S1 RNA binding domain
