locus-tag class description D5400_RS00005 PF11638 DnaA N-terminal domain D5400_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix D5400_RS00005 PF00308 Bacterial dnaA protein D5400_RS00010 PF02767 DNA polymerase III beta subunit, central domain D5400_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain D5400_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain D5400_RS00015 PF02463 RecF/RecN/SMC N terminal domain D5400_RS00020 PF00581 Rhodanese-like domain D5400_RS00020 PF00899 ThiF family D5400_RS00030 PF00009 Elongation factor Tu GTP binding domain D5400_RS00030 PF03144 Elongation factor Tu domain 2 D5400_RS00030 PF16658 Class II release factor RF3, C-terminal domain D5400_RS00035 PF00692 dUTPase D5400_RS00060 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D5400_RS00060 PF14602 Hexapeptide repeat of succinyl-transferase D5400_RS00060 PF00132 Bacterial transferase hexapeptide (six repeats) D5400_RS00070 PF07687 Peptidase dimerisation domain D5400_RS00070 PF01546 Peptidase family M20/M25/M40 D5400_RS00080 PF03358 NADPH-dependent FMN reductase D5400_RS00085 PF03960 ArsC family D5400_RS00095 PF10576 Iron-sulfur binding domain of endonuclease III D5400_RS00095 PF00633 Helix-hairpin-helix motif D5400_RS00095 PF00730 HhH-GPD superfamily base excision DNA repair protein D5400_RS00110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5400_RS00110 PF00672 HAMP domain D5400_RS00110 PF00072 Response regulator receiver domain D5400_RS00110 PF01627 Hpt domain D5400_RS00110 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS00115 PF01106 NifU-like domain D5400_RS00125 PF00579 tRNA synthetases class I (W and Y) D5400_RS00130 PF03023 Lipid II flippase MurJ D5400_RS00135 PF01842 ACT domain D5400_RS00135 PF08335 GlnD PII-uridylyltransferase D5400_RS00135 PF01966 HD domain D5400_RS00135 PF01909 Nucleotidyltransferase domain D5400_RS00140 PF01156 Inosine-uridine preferring nucleoside hydrolase D5400_RS00145 PF00011 Hsp20/alpha crystallin family D5400_RS00155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D5400_RS00160 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus D5400_RS00160 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D5400_RS00165 PF04552 Sigma-54, DNA binding domain D5400_RS00165 PF04963 Sigma-54 factor, core binding domain D5400_RS00165 PF00309 Sigma-54 factor, Activator interacting domain (AID) D5400_RS00170 PF00005 ABC transporter D5400_RS00175 PF03968 OstA-like protein D5400_RS00185 PF01343 Peptidase family S49 D5400_RS00190 PF00216 Bacterial DNA-binding protein D5400_RS00200 PF02423 Ornithine cyclodeaminase/mu-crystallin family D5400_RS00210 PF17785 PUA-like domain D5400_RS00210 PF10672 S-adenosylmethionine-dependent methyltransferase D5400_RS00215 PF08032 RNA 2'-O ribose methyltransferase substrate binding D5400_RS00215 PF00588 SpoU rRNA Methylase family D5400_RS00220 PF01252 Signal peptidase (SPase) II D5400_RS00225 PF08240 Alcohol dehydrogenase GroES-like domain D5400_RS00225 PF00107 Zinc-binding dehydrogenase D5400_RS00230 PF00814 Glycoprotease family D5400_RS00240 PF01475 Ferric uptake regulator family D5400_RS00245 PF01553 Acyltransferase D5400_RS00250 PF00919 Uncharacterized protein family UPF0004 D5400_RS00250 PF01938 TRAM domain D5400_RS00250 PF04055 Radical SAM superfamily D5400_RS00255 PF02562 PhoH-like protein D5400_RS00260 PF02130 Uncharacterized protein family UPF0054 D5400_RS00265 PF00571 CBS domain D5400_RS00265 PF03471 Transporter associated domain D5400_RS00270 PF00795 Carbon-nitrogen hydrolase D5400_RS00275 PF01381 Helix-turn-helix D5400_RS00280 PF00438 S-adenosylmethionine synthetase, N-terminal domain D5400_RS00280 PF02772 S-adenosylmethionine synthetase, central domain D5400_RS00280 PF02773 S-adenosylmethionine synthetase, C-terminal domain D5400_RS00285 PF02390 Putative methyltransferase D5400_RS00290 PF02685 Glucokinase D5400_RS00295 PF02142 MGS-like domain D5400_RS00300 PF03411 Penicillin-insensitive murein endopeptidase D5400_RS00310 PF00535 Glycosyl transferase family 2 D5400_RS00320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5400_RS00320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D5400_RS00335 PF00730 HhH-GPD superfamily base excision DNA repair protein D5400_RS00335 PF00633 Helix-hairpin-helix motif D5400_RS00335 PF10576 Iron-sulfur binding domain of endonuclease III D5400_RS00340 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D5400_RS00340 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D5400_RS00345 PF00390 Malic enzyme, N-terminal domain D5400_RS00345 PF01515 Phosphate acetyl/butaryl transferase D5400_RS00345 PF03949 Malic enzyme, NAD binding domain D5400_RS00350 PF00488 MutS domain V D5400_RS00350 PF01624 MutS domain I D5400_RS00350 PF05192 MutS domain III D5400_RS00350 PF05190 MutS family domain IV D5400_RS00350 PF05188 MutS domain II D5400_RS00355 PF01025 GrpE D5400_RS00360 PF03458 UPF0126 domain D5400_RS00365 PF00294 pfkB family carbohydrate kinase D5400_RS00370 PF01416 tRNA pseudouridine synthase D5400_RS00375 PF00551 Formyl transferase D5400_RS00375 PF02911 Formyl transferase, C-terminal domain D5400_RS00380 PF01327 Polypeptide deformylase D5400_RS00390 PF00294 pfkB family carbohydrate kinase D5400_RS00395 PF07478 D-ala D-ala ligase C-terminus D5400_RS00395 PF01820 D-ala D-ala ligase N-terminus D5400_RS00405 PF01628 HrcA protein C terminal domain D5400_RS00410 PF01138 3' exoribonuclease family, domain 1 D5400_RS00410 PF03725 3' exoribonuclease family, domain 2 D5400_RS00420 PF01725 Ham1 family D5400_RS00425 PF06969 HemN C-terminal domain D5400_RS00425 PF04055 Radical SAM superfamily D5400_RS00435 PF00962 Adenosine/AMP deaminase D5400_RS00440 PF01676 Metalloenzyme superfamily D5400_RS00475 PF04972 BON domain D5400_RS00475 PF00263 Bacterial type II and III secretion system protein D5400_RS00475 PF13629 Pilus formation protein N terminal region D5400_RS00490 PF00437 Type II/IV secretion system protein D5400_RS00515 PF03928 Haem-degrading D5400_RS00520 PF00480 ROK family D5400_RS00525 PF17912 MalK OB fold domain D5400_RS00525 PF00005 ABC transporter D5400_RS00525 PF03459 TOBE domain D5400_RS00530 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS00535 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS00540 PF01547 Bacterial extracellular solute-binding protein D5400_RS00545 PF00356 Bacterial regulatory proteins, lacI family D5400_RS00555 PF07244 Surface antigen variable number repeat D5400_RS00555 PF01103 Surface antigen D5400_RS00555 PF17243 POTRA domain TamA domain 1 D5400_RS00580 PF00986 DNA gyrase B subunit, carboxyl terminus D5400_RS00580 PF01751 Toprim domain D5400_RS00580 PF00204 DNA gyrase B D5400_RS00580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS00585 PF03472 Autoinducer binding domain D5400_RS00585 PF00196 Bacterial regulatory proteins, luxR family D5400_RS00590 PF01968 Hydantoinase/oxoprolinase D5400_RS00590 PF05378 Hydantoinase/oxoprolinase N-terminal region D5400_RS00595 PF01274 Malate synthase D5400_RS00605 PF17969 L,D-transpeptidase C-terminal domain D5400_RS00605 PF03734 L,D-transpeptidase catalytic domain D5400_RS00615 PF00072 Response regulator receiver domain D5400_RS00620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS00620 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS00625 PF00271 Helicase conserved C-terminal domain D5400_RS00625 PF08482 ATP-dependent helicase C-terminal D5400_RS00625 PF00270 DEAD/DEAH box helicase D5400_RS00625 PF04408 Helicase associated domain (HA2) D5400_RS00630 PF00005 ABC transporter D5400_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS00640 PF13416 Bacterial extracellular solute-binding protein D5400_RS00645 PF01926 50S ribosome-binding GTPase D5400_RS00650 PF14849 YidC periplasmic domain D5400_RS00650 PF02096 60Kd inner membrane protein D5400_RS00655 PF00825 Ribonuclease P D5400_RS00660 PF00468 Ribosomal protein L34 D5400_RS00670 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5400_RS00670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5400_RS00675 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS00675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS00675 PF00989 PAS fold D5400_RS00745 PF00436 Single-strand binding protein family D5400_RS00750 PF13411 MerR HTH family regulatory protein D5400_RS00755 PF02411 MerT mercuric transport protein D5400_RS00770 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5400_RS00770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5400_RS00790 PF02899 Phage integrase, N-terminal SAM-like domain D5400_RS00790 PF00589 Phage integrase family D5400_RS00795 PF01381 Helix-turn-helix D5400_RS00835 PF10502 Signal peptidase, peptidase S26 D5400_RS00845 PF01464 Transglycosylase SLT domain D5400_RS00845 PF10145 Phage-related minor tail protein D5400_RS00845 PF01551 Peptidase family M23 D5400_RS00855 PF02534 Type IV secretory system Conjugative DNA transfer D5400_RS00865 PF01252 Signal peptidase (SPase) II D5400_RS00875 PF00795 Carbon-nitrogen hydrolase D5400_RS00880 PF02683 Cytochrome C biogenesis protein transmembrane region D5400_RS00890 PF01566 Natural resistance-associated macrophage protein D5400_RS00900 PF13462 Thioredoxin D5400_RS00910 PF17969 L,D-transpeptidase C-terminal domain D5400_RS00910 PF03734 L,D-transpeptidase catalytic domain D5400_RS00925 PF03734 L,D-transpeptidase catalytic domain D5400_RS00925 PF01476 LysM domain D5400_RS00925 PF17969 L,D-transpeptidase C-terminal domain D5400_RS00935 PF03734 L,D-transpeptidase catalytic domain D5400_RS00955 PF09278 MerR, DNA binding D5400_RS00955 PF00376 MerR family regulatory protein D5400_RS00970 PF00403 Heavy-metal-associated domain D5400_RS00980 PF02630 SCO1/SenC D5400_RS00985 PF02600 Disulfide bond formation protein DsbB D5400_RS00995 PF01545 Cation efflux family D5400_RS01005 PF00486 Transcriptional regulatory protein, C terminal D5400_RS01005 PF00072 Response regulator receiver domain D5400_RS01010 PF00032 Cytochrome b(C-terminal)/b6/petD D5400_RS01010 PF00033 Cytochrome b/b6/petB D5400_RS01015 PF13411 MerR HTH family regulatory protein D5400_RS01025 PF00398 Ribosomal RNA adenine dimethylase D5400_RS01030 PF01464 Transglycosylase SLT domain D5400_RS01030 PF10145 Phage-related minor tail protein D5400_RS01030 PF01551 Peptidase family M23 D5400_RS01040 PF13520 Amino acid permease D5400_RS01045 PF01578 Cytochrome C assembly protein D5400_RS01045 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D5400_RS01050 PF08534 Redoxin D5400_RS01060 PF03466 LysR substrate binding domain D5400_RS01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS01065 PF00437 Type II/IV secretion system protein D5400_RS01070 PF04956 TrbC/VIRB2 family D5400_RS01080 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D5400_RS01095 PF04610 TrbL/VirB6 plasmid conjugal transfer protein D5400_RS01105 PF03524 Conjugal transfer protein D5400_RS01110 PF03743 Bacterial conjugation TrbI-like protein D5400_RS01130 PF00004 ATPase family associated with various cellular activities (AAA) D5400_RS01165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS01165 PF03466 LysR substrate binding domain D5400_RS01170 PF03601 Conserved hypothetical protein 698 D5400_RS01175 PF01641 SelR domain D5400_RS01190 PF00696 Amino acid kinase family D5400_RS01195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5400_RS01195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5400_RS01210 PF07977 FabA-like domain D5400_RS01215 PF00109 Beta-ketoacyl synthase, N-terminal domain D5400_RS01215 PF02801 Beta-ketoacyl synthase, C-terminal domain D5400_RS01225 PF07687 Peptidase dimerisation domain D5400_RS01225 PF01546 Peptidase family M20/M25/M40 D5400_RS01245 PF00905 Penicillin binding protein transpeptidase domain D5400_RS01245 PF00912 Transglycosylase D5400_RS01250 PF00012 Hsp70 protein D5400_RS01255 PF01556 DnaJ C terminal domain D5400_RS01255 PF00226 DnaJ domain D5400_RS01255 PF00684 DnaJ central domain D5400_RS01260 PF13649 Methyltransferase domain D5400_RS01265 PF03358 NADPH-dependent FMN reductase D5400_RS01270 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D5400_RS01285 PF02673 Bacitracin resistance protein BacA D5400_RS01290 PF13417 Glutathione S-transferase, N-terminal domain D5400_RS01290 PF00043 Glutathione S-transferase, C-terminal domain D5400_RS01295 PF08331 Domain of unknown function (DUF1730) D5400_RS01305 PF03330 Lytic transglycolase D5400_RS01310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5400_RS01315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5400_RS01315 PF00005 ABC transporter D5400_RS01320 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS01320 PF12911 N-terminal TM domain of oligopeptide transport permease C D5400_RS01325 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS01330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5400_RS01335 PF07687 Peptidase dimerisation domain D5400_RS01335 PF01546 Peptidase family M20/M25/M40 D5400_RS01350 PF13662 Toprim domain D5400_RS01350 PF02132 RecR protein D5400_RS01355 PF02575 YbaB/EbfC DNA-binding family D5400_RS01360 PF12169 DNA polymerase III subunits gamma and tau domain III D5400_RS01360 PF12170 DNA polymerase III tau subunit V interacting with alpha D5400_RS01360 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D5400_RS01375 PF09297 NADH pyrophosphatase zinc ribbon domain D5400_RS01375 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain D5400_RS01375 PF00293 NUDIX domain D5400_RS01380 PF01842 ACT domain D5400_RS01380 PF00800 Prephenate dehydratase D5400_RS01380 PF01817 Chorismate mutase type II D5400_RS01385 PF02348 Cytidylyltransferase D5400_RS01390 PF00034 Cytochrome c D5400_RS01395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5400_RS01400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5400_RS01405 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS01410 PF12911 N-terminal TM domain of oligopeptide transport permease C D5400_RS01410 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS01420 PF01850 PIN domain D5400_RS01425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5400_RS01425 PF00005 ABC transporter D5400_RS01430 PF00293 NUDIX domain D5400_RS01435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5400_RS01445 PF00877 NlpC/P60 family D5400_RS01445 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain D5400_RS01455 PF00883 Cytosol aminopeptidase family, catalytic domain D5400_RS01455 PF02789 Cytosol aminopeptidase family, N-terminal domain D5400_RS01465 PF00009 Elongation factor Tu GTP binding domain D5400_RS01465 PF06421 GTP-binding protein LepA C-terminus D5400_RS01465 PF03144 Elongation factor Tu domain 2 D5400_RS01465 PF00679 Elongation factor G C-terminus D5400_RS01475 PF00487 Fatty acid desaturase D5400_RS01480 PF02028 BCCT, betaine/carnitine/choline family transporter D5400_RS01490 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS01495 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5400_RS01500 PF00392 Bacterial regulatory proteins, gntR family D5400_RS01500 PF07729 FCD domain D5400_RS01510 PF00753 Metallo-beta-lactamase superfamily D5400_RS01515 PF00155 Aminotransferase class I and II D5400_RS01525 PF00266 Aminotransferase class-V D5400_RS01530 PF00892 EamA-like transporter family D5400_RS01540 PF01367 5'-3' exonuclease, C-terminal SAM fold D5400_RS01540 PF00476 DNA polymerase family A D5400_RS01540 PF01612 3'-5' exonuclease D5400_RS01540 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D5400_RS01555 PF01235 Sodium:alanine symporter family D5400_RS01560 PF00583 Acetyltransferase (GNAT) family D5400_RS01585 PF00013 KH domain D5400_RS01585 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D5400_RS01585 PF00575 S1 RNA binding domain D5400_RS01585 PF03725 3' exoribonuclease family, domain 2 D5400_RS01585 PF01138 3' exoribonuclease family, domain 1 D5400_RS01590 PF00312 Ribosomal protein S15 D5400_RS01595 PF13426 PAS domain D5400_RS01595 PF13581 Histidine kinase-like ATPase domain D5400_RS01595 PF07536 HWE histidine kinase D5400_RS01600 PF01509 TruB family pseudouridylate synthase (N terminal domain) D5400_RS01600 PF16198 tRNA pseudouridylate synthase B C-terminal domain D5400_RS01600 PF09157 Pseudouridine synthase II TruB, C-terminal D5400_RS01605 PF02033 Ribosome-binding factor A D5400_RS01610 PF00009 Elongation factor Tu GTP binding domain D5400_RS01610 PF04760 Translation initiation factor IF-2, N-terminal region D5400_RS01610 PF11987 Translation-initiation factor 2 D5400_RS01610 PF08364 Bacterial translation initiation factor IF-2 associated region D5400_RS01620 PF13184 NusA-like KH domain D5400_RS01620 PF08529 NusA N-terminal domain D5400_RS01620 PF00575 S1 RNA binding domain D5400_RS01625 PF17384 RimP C-terminal SH3 domain D5400_RS01625 PF02576 RimP N-terminal domain D5400_RS01630 PF00005 ABC transporter D5400_RS01630 PF00664 ABC transporter transmembrane region D5400_RS01635 PF01113 Dihydrodipicolinate reductase, N-terminus D5400_RS01635 PF05173 Dihydrodipicolinate reductase, C-terminus D5400_RS01640 PF04102 SlyX D5400_RS01650 PF00005 ABC transporter D5400_RS01655 PF02653 Branched-chain amino acid transport system / permease component D5400_RS01660 PF02653 Branched-chain amino acid transport system / permease component D5400_RS01665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D5400_RS01670 PF01048 Phosphorylase superfamily D5400_RS01675 PF01791 DeoC/LacD family aldolase D5400_RS01680 PF00591 Glycosyl transferase family, a/b domain D5400_RS01680 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D5400_RS01680 PF02885 Glycosyl transferase family, helical bundle domain D5400_RS01695 PF00465 Iron-containing alcohol dehydrogenase D5400_RS01700 PF00171 Aldehyde dehydrogenase family D5400_RS01705 PF00120 Glutamine synthetase, catalytic domain D5400_RS01705 PF03951 Glutamine synthetase, beta-Grasp domain D5400_RS01715 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS01735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5400_RS01740 PF02021 Uncharacterised protein family UPF0102 D5400_RS01745 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D5400_RS01745 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D5400_RS01750 PF01078 Magnesium chelatase, subunit ChlI D5400_RS01750 PF13335 Magnesium chelatase, subunit ChlI C-terminal D5400_RS01755 PF01048 Phosphorylase superfamily D5400_RS01760 PF00351 Biopterin-dependent aromatic amino acid hydroxylase D5400_RS01765 PF01037 Lrp/AsnC ligand binding domain D5400_RS01770 PF02322 Cytochrome bd terminal oxidase subunit II D5400_RS01775 PF01654 Cytochrome bd terminal oxidase subunit I D5400_RS01805 PF00707 Translation initiation factor IF-3, C-terminal domain D5400_RS01805 PF05198 Translation initiation factor IF-3, N-terminal domain D5400_RS01810 PF04191 Phospholipid methyltransferase D5400_RS01815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5400_RS01820 PF01632 Ribosomal protein L35 D5400_RS01825 PF00453 Ribosomal protein L20 D5400_RS01835 PF01409 tRNA synthetases class II core domain (F) D5400_RS01835 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D5400_RS01855 PF03147 Ferredoxin-fold anticodon binding domain D5400_RS01855 PF01588 Putative tRNA binding domain D5400_RS01855 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D5400_RS01855 PF03483 B3/4 domain D5400_RS01855 PF03484 tRNA synthetase B5 domain D5400_RS01860 PF13426 PAS domain D5400_RS01860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5400_RS01860 PF08447 PAS fold D5400_RS01865 PF02608 ABC transporter substrate-binding protein PnrA-like D5400_RS01870 PF01625 Peptide methionine sulfoxide reductase D5400_RS01900 PF04199 Putative cyclase D5400_RS01910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5400_RS01915 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS01920 PF12911 N-terminal TM domain of oligopeptide transport permease C D5400_RS01920 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS01925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5400_RS01925 PF00005 ABC transporter D5400_RS01930 PF00005 ABC transporter D5400_RS01930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5400_RS01935 PF02634 FdhD/NarQ family D5400_RS01940 PF00384 Molybdopterin oxidoreductase D5400_RS01945 PF00196 Bacterial regulatory proteins, luxR family D5400_RS01945 PF00072 Response regulator receiver domain D5400_RS01950 PF00765 Autoinducer synthase D5400_RS01965 PF03006 Haemolysin-III related D5400_RS01970 PF00392 Bacterial regulatory proteins, gntR family D5400_RS01970 PF07729 FCD domain D5400_RS01975 PF00180 Isocitrate/isopropylmalate dehydrogenase D5400_RS01980 PF00180 Isocitrate/isopropylmalate dehydrogenase D5400_RS02015 PF01970 Tripartite tricarboxylate transporter TctA family D5400_RS02025 PF00561 alpha/beta hydrolase fold D5400_RS02030 PF13378 Enolase C-terminal domain-like D5400_RS02030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D5400_RS02060 PF05145 Transition state regulatory protein AbrB D5400_RS02065 PF13378 Enolase C-terminal domain-like D5400_RS02085 PF03552 Cellulose synthase D5400_RS02085 PF00535 Glycosyl transferase family 2 D5400_RS02085 PF07238 PilZ domain D5400_RS02095 PF02515 CoA-transferase family III D5400_RS02100 PF02770 Acyl-CoA dehydrogenase, middle domain D5400_RS02100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5400_RS02100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5400_RS02105 PF03972 MmgE/PrpD family D5400_RS02110 PF03466 LysR substrate binding domain D5400_RS02110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS02115 PF01612 3'-5' exonuclease D5400_RS02115 PF00476 DNA polymerase family A D5400_RS02125 PF00575 S1 RNA binding domain D5400_RS02130 PF02224 Cytidylate kinase D5400_RS02135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D5400_RS02160 PF07729 FCD domain D5400_RS02160 PF00392 Bacterial regulatory proteins, gntR family D5400_RS02170 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS02175 PF00005 ABC transporter D5400_RS02180 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS02185 PF01557 Fumarylacetoacetate (FAA) hydrolase family D5400_RS02190 PF01925 Sulfite exporter TauE/SafE D5400_RS02195 PF01569 PAP2 superfamily D5400_RS02200 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D5400_RS02200 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D5400_RS02210 PF01042 Endoribonuclease L-PSP D5400_RS02225 PF03466 LysR substrate binding domain D5400_RS02225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS02235 PF02614 Glucuronate isomerase D5400_RS02240 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS02245 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D5400_RS02250 PF03480 Bacterial extracellular solute-binding protein, family 7 D5400_RS02260 PF00392 Bacterial regulatory proteins, gntR family D5400_RS02260 PF07729 FCD domain D5400_RS02265 PF03786 D-mannonate dehydratase (UxuA) D5400_RS02270 PF08125 Mannitol dehydrogenase C-terminal domain D5400_RS02270 PF01232 Mannitol dehydrogenase Rossmann domain D5400_RS02275 PF00294 pfkB family carbohydrate kinase D5400_RS02280 PF03466 LysR substrate binding domain D5400_RS02280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS02285 PF00202 Aminotransferase class-III D5400_RS02290 PF14542 GCN5-related N-acetyl-transferase D5400_RS02295 PF02678 Pirin D5400_RS02295 PF05726 Pirin C-terminal cupin domain D5400_RS02300 PF03466 LysR substrate binding domain D5400_RS02300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS02310 PF00005 ABC transporter D5400_RS02315 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS02320 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS02325 PF13416 Bacterial extracellular solute-binding protein D5400_RS02335 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS02340 PF08402 TOBE domain D5400_RS02340 PF00005 ABC transporter D5400_RS02345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS02345 PF03466 LysR substrate binding domain D5400_RS02350 PF00106 short chain dehydrogenase D5400_RS02380 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D5400_RS02385 PF00291 Pyridoxal-phosphate dependent enzyme D5400_RS02390 PF00290 Tryptophan synthase alpha chain D5400_RS02395 PF01039 Carboxyl transferase domain D5400_RS02400 PF02875 Mur ligase family, glutamate ligase domain D5400_RS02400 PF08245 Mur ligase middle domain D5400_RS02405 PF00085 Thioredoxin D5400_RS02410 PF12705 PD-(D/E)XK nuclease superfamily D5400_RS02410 PF00580 UvrD/REP helicase N-terminal domain D5400_RS02410 PF13361 UvrD-like helicase C-terminal domain D5400_RS02415 PF12705 PD-(D/E)XK nuclease superfamily D5400_RS02420 PF12804 MobA-like NTP transferase domain D5400_RS02425 PF01636 Phosphotransferase enzyme family D5400_RS02430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS02430 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS02435 PF05221 S-adenosyl-L-homocysteine hydrolase D5400_RS02435 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain D5400_RS02440 PF00381 PTS HPr component phosphorylation site D5400_RS02445 PF03830 PTS system sorbose subfamily IIB component D5400_RS02445 PF03610 PTS system fructose IIA component D5400_RS02450 PF02603 HPr Serine kinase N terminus D5400_RS02450 PF07475 HPr Serine kinase C-terminal domain D5400_RS02455 PF13755 Sensor N-terminal transmembrane domain D5400_RS02455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS02455 PF13756 Stimulus-sensing domain D5400_RS02455 PF00672 HAMP domain D5400_RS02455 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS02460 PF00486 Transcriptional regulatory protein, C terminal D5400_RS02460 PF00072 Response regulator receiver domain D5400_RS02465 PF01293 Phosphoenolpyruvate carboxykinase D5400_RS02470 PF00472 RF-1 domain D5400_RS02475 PF13532 2OG-Fe(II) oxygenase superfamily D5400_RS02485 PF00485 Phosphoribulokinase / Uridine kinase family D5400_RS02490 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D5400_RS02495 PF00977 Histidine biosynthesis protein D5400_RS02500 PF00977 Histidine biosynthesis protein D5400_RS02505 PF00117 Glutamine amidotransferase class-I D5400_RS02515 PF00475 Imidazoleglycerol-phosphate dehydratase D5400_RS02520 PF00227 Proteasome subunit D5400_RS02525 PF07724 AAA domain (Cdc48 subfamily) D5400_RS02525 PF10431 C-terminal, D2-small domain, of ClpB protein D5400_RS02525 PF00004 ATPase family associated with various cellular activities (AAA) D5400_RS02555 PF04186 FxsA cytoplasmic membrane protein D5400_RS02560 PF02556 Preprotein translocase subunit SecB D5400_RS02565 PF00929 Exonuclease D5400_RS02570 PF01121 Dephospho-CoA kinase D5400_RS02575 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D5400_RS02575 PF01488 Shikimate / quinate 5-dehydrogenase D5400_RS02575 PF08501 Shikimate dehydrogenase substrate binding domain D5400_RS02580 PF02545 Maf-like protein D5400_RS02585 PF03618 Kinase/pyrophosphorylase D5400_RS02590 PF01208 Uroporphyrinogen decarboxylase (URO-D) D5400_RS02595 PF03653 Uncharacterised protein family (UPF0093) D5400_RS02600 PF07497 Rho termination factor, RNA-binding domain D5400_RS02600 PF07498 Rho termination factor, N-terminal domain D5400_RS02600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5400_RS02605 PF12631 MnmE helical domain D5400_RS02605 PF01926 50S ribosome-binding GTPase D5400_RS02605 PF10396 GTP-binding protein TrmE N-terminus D5400_RS02610 PF01134 Glucose inhibited division protein A D5400_RS02610 PF13932 GidA associated domain D5400_RS02615 PF02527 rRNA small subunit methyltransferase G D5400_RS02620 PF13614 AAA domain D5400_RS02625 PF02195 ParB-like nuclease domain D5400_RS02625 PF17762 HTH domain found in ParB protein D5400_RS02640 PF13603 Leucyl-tRNA synthetase, Domain 2 D5400_RS02640 PF09334 tRNA synthetases class I (M) D5400_RS02640 PF08264 Anticodon-binding domain of tRNA D5400_RS02640 PF00133 tRNA synthetases class I (I, L, M and V) D5400_RS02645 PF01168 Alanine racemase, N-terminal domain D5400_RS02655 PF02142 MGS-like domain D5400_RS02655 PF01808 AICARFT/IMPCHase bienzyme D5400_RS02665 PF01189 16S rRNA methyltransferase RsmB/F D5400_RS02665 PF01029 NusB family D5400_RS02670 PF01435 Peptidase family M48 D5400_RS02690 PF13193 AMP-binding enzyme C-terminal domain D5400_RS02690 PF16177 Acetyl-coenzyme A synthetase N-terminus D5400_RS02690 PF00501 AMP-binding enzyme D5400_RS02705 PF00501 AMP-binding enzyme D5400_RS02705 PF16177 Acetyl-coenzyme A synthetase N-terminus D5400_RS02705 PF13193 AMP-binding enzyme C-terminal domain D5400_RS02710 PF05088 Bacterial NAD-glutamate dehydrogenase D5400_RS02725 PF08543 Phosphomethylpyrimidine kinase D5400_RS02730 PF00484 Carbonic anhydrase D5400_RS02740 PF01118 Semialdehyde dehydrogenase, NAD binding domain D5400_RS02740 PF02774 Semialdehyde dehydrogenase, dimerisation domain D5400_RS02745 PF06224 Winged helix DNA-binding domain D5400_RS02750 PF00180 Isocitrate/isopropylmalate dehydrogenase D5400_RS02755 PF00909 Ammonium Transporter Family D5400_RS02760 PF00543 Nitrogen regulatory protein P-II D5400_RS02770 PF01494 FAD binding domain D5400_RS02775 PF03966 Trm112p-like protein D5400_RS02780 PF05362 Lon protease (S16) C-terminal proteolytic domain D5400_RS02780 PF02190 ATP-dependent protease La (LON) substrate-binding domain D5400_RS02780 PF00004 ATPase family associated with various cellular activities (AAA) D5400_RS02785 PF00085 Thioredoxin D5400_RS02800 PF02347 Glycine cleavage system P-protein D5400_RS02805 PF01597 Glycine cleavage H-protein D5400_RS02810 PF08669 Glycine cleavage T-protein C-terminal barrel domain D5400_RS02810 PF01571 Aminomethyltransferase folate-binding domain D5400_RS02815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5400_RS02815 PF00672 HAMP domain D5400_RS02835 PF03328 HpcH/HpaI aldolase/citrate lyase family D5400_RS02850 PF00694 Aconitase C-terminal domain D5400_RS02860 PF09397 Ftsk gamma domain D5400_RS02860 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D5400_RS02860 PF01580 FtsK/SpoIIIE family D5400_RS02860 PF17854 FtsK alpha domain D5400_RS02865 PF03548 Outer membrane lipoprotein carrier protein LolA D5400_RS02875 PF06055 Exopolysaccharide synthesis, ExoD D5400_RS02890 PF00486 Transcriptional regulatory protein, C terminal D5400_RS02890 PF00072 Response regulator receiver domain D5400_RS02915 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D5400_RS02915 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D5400_RS02920 PF00814 Glycoprotease family D5400_RS02925 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D5400_RS02925 PF03900 Porphobilinogen deaminase, C-terminal domain D5400_RS02950 PF00117 Glutamine amidotransferase class-I D5400_RS02955 PF02325 YGGT family D5400_RS02960 PF00719 Inorganic pyrophosphatase D5400_RS02965 PF00583 Acetyltransferase (GNAT) family D5400_RS02970 PF00009 Elongation factor Tu GTP binding domain D5400_RS02970 PF00679 Elongation factor G C-terminus D5400_RS02970 PF03144 Elongation factor Tu domain 2 D5400_RS02975 PF01432 Peptidase family M3 D5400_RS02985 PF07690 Major Facilitator Superfamily D5400_RS02990 PF00764 Arginosuccinate synthase D5400_RS03005 PF04055 Radical SAM superfamily D5400_RS03015 PF04542 Sigma-70 region 2 D5400_RS03015 PF04545 Sigma-70, region 4 D5400_RS03025 PF01329 Pterin 4 alpha carbinolamine dehydratase D5400_RS03030 PF02834 LigT like Phosphoesterase D5400_RS03035 PF13472 GDSL-like Lipase/Acylhydrolase family D5400_RS03040 PF00005 ABC transporter D5400_RS03050 PF01027 Inhibitor of apoptosis-promoting Bax1 D5400_RS03070 PF00694 Aconitase C-terminal domain D5400_RS03070 PF00330 Aconitase family (aconitate hydratase) D5400_RS03075 PF00005 ABC transporter D5400_RS03080 PF03379 CcmB protein D5400_RS03085 PF01578 Cytochrome C assembly protein D5400_RS03095 PF08534 Redoxin D5400_RS03100 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D5400_RS03105 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH D5400_RS03110 PF04279 Intracellular septation protein A D5400_RS03115 PF00448 SRP54-type protein, GTPase domain D5400_RS03115 PF02881 SRP54-type protein, helical bundle domain D5400_RS03120 PF00919 Uncharacterized protein family UPF0004 D5400_RS03120 PF04055 Radical SAM superfamily D5400_RS03125 PF01678 Diaminopimelate epimerase D5400_RS03130 PF12706 Beta-lactamase superfamily domain D5400_RS03140 PF00448 SRP54-type protein, GTPase domain D5400_RS03140 PF02881 SRP54-type protein, helical bundle domain D5400_RS03140 PF02978 Signal peptide binding domain D5400_RS03145 PF01817 Chorismate mutase type II D5400_RS03145 PF02153 Prephenate dehydrogenase D5400_RS03150 PF00886 Ribosomal protein S16 D5400_RS03155 PF01782 RimM N-terminal domain D5400_RS03155 PF05239 PRC-barrel domain D5400_RS03160 PF01746 tRNA (Guanine-1)-methyltransferase D5400_RS03165 PF01245 Ribosomal protein L19 D5400_RS03170 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5400_RS03175 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS03180 PF00330 Aconitase family (aconitate hydratase) D5400_RS03185 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS03205 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D5400_RS03215 PF02910 Fumarate reductase flavoprotein C-term D5400_RS03215 PF00890 FAD binding domain D5400_RS03220 PF13237 4Fe-4S dicluster domain D5400_RS03220 PF13085 2Fe-2S iron-sulfur cluster binding domain D5400_RS03230 PF02566 OsmC-like protein D5400_RS03235 PF01625 Peptide methionine sulfoxide reductase D5400_RS03240 PF02974 Protease inhibitor Inh D5400_RS03245 PF03969 AFG1-like ATPase D5400_RS03250 PF00056 lactate/malate dehydrogenase, NAD binding domain D5400_RS03250 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D5400_RS03255 PF08442 ATP-grasp domain D5400_RS03255 PF00549 CoA-ligase D5400_RS03260 PF02629 CoA binding domain D5400_RS03260 PF00549 CoA-ligase D5400_RS03265 PF02779 Transketolase, pyrimidine binding domain D5400_RS03265 PF16078 2-oxoglutarate dehydrogenase N-terminus D5400_RS03265 PF00676 Dehydrogenase E1 component D5400_RS03265 PF16870 2-oxoglutarate dehydrogenase C-terminal D5400_RS03270 PF02817 e3 binding domain D5400_RS03270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D5400_RS03270 PF00364 Biotin-requiring enzyme D5400_RS03275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5400_RS03275 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5400_RS03295 PF02899 Phage integrase, N-terminal SAM-like domain D5400_RS03295 PF00589 Phage integrase family D5400_RS03305 PF00072 Response regulator receiver domain D5400_RS03305 PF00486 Transcriptional regulatory protein, C terminal D5400_RS03310 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS03310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS03325 PF01970 Tripartite tricarboxylate transporter TctA family D5400_RS03330 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal D5400_RS03330 PF00676 Dehydrogenase E1 component D5400_RS03335 PF02780 Transketolase, C-terminal domain D5400_RS03335 PF02779 Transketolase, pyrimidine binding domain D5400_RS03340 PF00364 Biotin-requiring enzyme D5400_RS03340 PF02817 e3 binding domain D5400_RS03340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D5400_RS03345 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5400_RS03345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5400_RS03350 PF02463 RecF/RecN/SMC N terminal domain D5400_RS03355 PF00923 Transaldolase/Fructose-6-phosphate aldolase D5400_RS03360 PF00270 DEAD/DEAH box helicase D5400_RS03360 PF17764 3′ DNA-binding domain (3′BD) D5400_RS03360 PF18074 Primosomal protein N C-terminal domain D5400_RS03360 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D5400_RS03370 PF00213 ATP synthase delta (OSCP) subunit D5400_RS03375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5400_RS03375 PF00306 ATP synthase alpha/beta chain, C terminal domain D5400_RS03375 PF02874 ATP synthase alpha/beta family, beta-barrel domain D5400_RS03380 PF00231 ATP synthase D5400_RS03385 PF02874 ATP synthase alpha/beta family, beta-barrel domain D5400_RS03385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5400_RS03390 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D5400_RS03405 PF13180 PDZ domain D5400_RS03405 PF03572 Peptidase family S41 D5400_RS03410 PF01551 Peptidase family M23 D5400_RS03420 PF02590 Predicted SPOUT methyltransferase D5400_RS03425 PF01926 50S ribosome-binding GTPase D5400_RS03425 PF01018 GTP1/OBG D5400_RS03430 PF01472 PUA domain D5400_RS03430 PF00696 Amino acid kinase family D5400_RS03435 PF00171 Aldehyde dehydrogenase family D5400_RS03440 PF01467 Cytidylyltransferase-like D5400_RS03460 PF01016 Ribosomal L27 protein D5400_RS03465 PF00829 Ribosomal prokaryotic L21 protein D5400_RS03500 PF07729 FCD domain D5400_RS03500 PF00392 Bacterial regulatory proteins, gntR family D5400_RS03505 PF03480 Bacterial extracellular solute-binding protein, family 7 D5400_RS03515 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS03525 PF01370 NAD dependent epimerase/dehydratase family D5400_RS03540 PF01261 Xylose isomerase-like TIM barrel D5400_RS03540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5400_RS03545 PF00106 short chain dehydrogenase D5400_RS03560 PF01584 CheW-like domain D5400_RS03565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5400_RS03565 PF00672 HAMP domain D5400_RS03570 PF01546 Peptidase family M20/M25/M40 D5400_RS03570 PF07687 Peptidase dimerisation domain D5400_RS03575 PF00005 ABC transporter D5400_RS03575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5400_RS03580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5400_RS03580 PF00005 ABC transporter D5400_RS03585 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS03585 PF12911 N-terminal TM domain of oligopeptide transport permease C D5400_RS03590 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS03595 PF07687 Peptidase dimerisation domain D5400_RS03595 PF01546 Peptidase family M20/M25/M40 D5400_RS03600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5400_RS03610 PF00155 Aminotransferase class I and II D5400_RS03630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS03650 PF00355 Rieske [2Fe-2S] domain D5400_RS03655 PF00970 Oxidoreductase FAD-binding domain D5400_RS03655 PF00175 Oxidoreductase NAD-binding domain D5400_RS03655 PF00111 2Fe-2S iron-sulfur cluster binding domain D5400_RS03660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5400_RS03660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D5400_RS03665 PF09084 NMT1/THI5 like D5400_RS03675 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS03685 PF00596 Class II Aldolase and Adducin N-terminal domain D5400_RS03690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS03690 PF03466 LysR substrate binding domain D5400_RS03695 PF00205 Thiamine pyrophosphate enzyme, central domain D5400_RS03695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5400_RS03695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5400_RS03700 PF00171 Aldehyde dehydrogenase family D5400_RS03705 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS03720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS03720 PF03466 LysR substrate binding domain D5400_RS03740 PF00676 Dehydrogenase E1 component D5400_RS03745 PF02780 Transketolase, C-terminal domain D5400_RS03745 PF02779 Transketolase, pyrimidine binding domain D5400_RS03745 PF00364 Biotin-requiring enzyme D5400_RS03750 PF00676 Dehydrogenase E1 component D5400_RS03755 PF02779 Transketolase, pyrimidine binding domain D5400_RS03755 PF02780 Transketolase, C-terminal domain D5400_RS03765 PF01434 Peptidase family M41 D5400_RS03765 PF17862 AAA+ lid domain D5400_RS03765 PF00004 ATPase family associated with various cellular activities (AAA) D5400_RS03795 PF07976 Phenol hydroxylase, C-terminal dimerisation domain D5400_RS03795 PF01494 FAD binding domain D5400_RS03800 PF01370 NAD dependent epimerase/dehydratase family D5400_RS03820 PF00534 Glycosyl transferases group 1 D5400_RS03820 PF13439 Glycosyltransferase Family 4 D5400_RS03830 PF01479 S4 domain D5400_RS03845 PF00561 alpha/beta hydrolase fold D5400_RS03855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS03855 PF03466 LysR substrate binding domain D5400_RS03860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5400_RS03870 PF03631 Virulence factor BrkB D5400_RS03875 PF13302 Acetyltransferase (GNAT) domain D5400_RS03875 PF00027 Cyclic nucleotide-binding domain D5400_RS03880 PF00005 ABC transporter D5400_RS03880 PF08402 TOBE domain D5400_RS03890 PF01547 Bacterial extracellular solute-binding protein D5400_RS03935 PF02653 Branched-chain amino acid transport system / permease component D5400_RS03935 PF11862 Domain of unknown function (DUF3382) D5400_RS03945 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5400_RS03945 PF00005 ABC transporter D5400_RS03950 PF00005 ABC transporter D5400_RS03955 PF00795 Carbon-nitrogen hydrolase D5400_RS03960 PF10431 C-terminal, D2-small domain, of ClpB protein D5400_RS03960 PF07724 AAA domain (Cdc48 subfamily) D5400_RS03980 PF13186 Iron-sulfur cluster-binding domain D5400_RS03980 PF04055 Radical SAM superfamily D5400_RS03985 PF05402 Coenzyme PQQ synthesis protein D (PqqD) D5400_RS03990 PF03070 TENA/THI-4/PQQC family D5400_RS03995 PF12706 Beta-lactamase superfamily domain D5400_RS04000 PF08042 PqqA family D5400_RS04010 PF13360 PQQ-like domain D5400_RS04020 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5400_RS04040 PF00005 ABC transporter D5400_RS04050 PF00756 Putative esterase D5400_RS04055 PF00107 Zinc-binding dehydrogenase D5400_RS04055 PF08240 Alcohol dehydrogenase GroES-like domain D5400_RS04090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS04090 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS04090 PF00989 PAS fold D5400_RS04095 PF00072 Response regulator receiver domain D5400_RS04095 PF00196 Bacterial regulatory proteins, luxR family D5400_RS04100 PF02028 BCCT, betaine/carnitine/choline family transporter D5400_RS04105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS04105 PF03466 LysR substrate binding domain D5400_RS04125 PF01011 PQQ enzyme repeat D5400_RS04130 PF01557 Fumarylacetoacetate (FAA) hydrolase family D5400_RS04140 PF00557 Metallopeptidase family M24 D5400_RS04145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS04145 PF03466 LysR substrate binding domain D5400_RS04160 PF04303 PrpF protein D5400_RS04165 PF00180 Isocitrate/isopropylmalate dehydrogenase D5400_RS04170 PF14537 Cytochrome c3 D5400_RS04170 PF00890 FAD binding domain D5400_RS04180 PF04303 PrpF protein D5400_RS04190 PF00392 Bacterial regulatory proteins, gntR family D5400_RS04190 PF07729 FCD domain D5400_RS04200 PF03466 LysR substrate binding domain D5400_RS04200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS04205 PF02615 Malate/L-lactate dehydrogenase D5400_RS04210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5400_RS04210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5400_RS04210 PF01842 ACT domain D5400_RS04215 PF03737 Aldolase/RraA D5400_RS04230 PF00593 TonB dependent receptor D5400_RS04230 PF07715 TonB-dependent Receptor Plug Domain D5400_RS04240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5400_RS04240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5400_RS04245 PF13419 Haloacid dehalogenase-like hydrolase D5400_RS04250 PF01232 Mannitol dehydrogenase Rossmann domain D5400_RS04250 PF08125 Mannitol dehydrogenase C-terminal domain D5400_RS04260 PF00005 ABC transporter D5400_RS04260 PF08402 TOBE domain D5400_RS04265 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS04290 PF04198 Putative sugar-binding domain D5400_RS04300 PF00005 ABC transporter D5400_RS04305 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS04310 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS04315 PF00392 Bacterial regulatory proteins, gntR family D5400_RS04315 PF07702 UTRA domain D5400_RS04325 PF03401 Tripartite tricarboxylate transporter family receptor D5400_RS04335 PF01970 Tripartite tricarboxylate transporter TctA family D5400_RS04340 PF00743 Flavin-binding monooxygenase-like D5400_RS04345 PF08240 Alcohol dehydrogenase GroES-like domain D5400_RS04345 PF00107 Zinc-binding dehydrogenase D5400_RS04350 PF00106 short chain dehydrogenase D5400_RS04355 PF00158 Sigma-54 interaction domain D5400_RS04355 PF02954 Bacterial regulatory protein, Fis family D5400_RS04355 PF01590 GAF domain D5400_RS04360 PF05199 GMC oxidoreductase D5400_RS04360 PF00732 GMC oxidoreductase D5400_RS04365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5400_RS04365 PF02770 Acyl-CoA dehydrogenase, middle domain D5400_RS04365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5400_RS04370 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D5400_RS04370 PF01676 Metalloenzyme superfamily D5400_RS04380 PF00403 Heavy-metal-associated domain D5400_RS04390 PF13545 Crp-like helix-turn-helix domain D5400_RS04390 PF00027 Cyclic nucleotide-binding domain D5400_RS04395 PF00704 Glycosyl hydrolases family 18 D5400_RS04395 PF00041 Fibronectin type III domain D5400_RS04405 PF01522 Polysaccharide deacetylase D5400_RS04410 PF00072 Response regulator receiver domain D5400_RS04410 PF00196 Bacterial regulatory proteins, luxR family D5400_RS04415 PF04542 Sigma-70 region 2 D5400_RS04415 PF08281 Sigma-70, region 4 D5400_RS04435 PF02245 Methylpurine-DNA glycosylase (MPG) D5400_RS04475 PF02633 Creatinine amidohydrolase D5400_RS04490 PF00005 ABC transporter D5400_RS04495 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS04500 PF07969 Amidohydrolase family D5400_RS04510 PF02525 Flavodoxin-like fold D5400_RS04520 PF00005 ABC transporter D5400_RS04520 PF16326 ABC transporter C-terminal domain D5400_RS04530 PF01547 Bacterial extracellular solute-binding protein D5400_RS04535 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS04540 PF00005 ABC transporter D5400_RS04550 PF11953 Domain of unknown function (DUF3470) D5400_RS04550 PF00037 4Fe-4S binding domain D5400_RS04555 PF02559 CarD-like/TRCF domain D5400_RS04560 PF00140 Sigma-70 factor, region 1.2 D5400_RS04560 PF04545 Sigma-70, region 4 D5400_RS04560 PF04542 Sigma-70 region 2 D5400_RS04565 PF00004 ATPase family associated with various cellular activities (AAA) D5400_RS04565 PF17871 AAA lid domain D5400_RS04565 PF02861 Clp amino terminal domain, pathogenicity island component D5400_RS04565 PF10431 C-terminal, D2-small domain, of ClpB protein D5400_RS04565 PF07724 AAA domain (Cdc48 subfamily) D5400_RS04575 PF00171 Aldehyde dehydrogenase family D5400_RS04585 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5400_RS04590 PF00111 2Fe-2S iron-sulfur cluster binding domain D5400_RS04590 PF01799 [2Fe-2S] binding domain D5400_RS04595 PF04551 GcpE protein D5400_RS04600 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS04600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS04600 PF00672 HAMP domain D5400_RS04600 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5400_RS04600 PF01627 Hpt domain D5400_RS04600 PF00072 Response regulator receiver domain D5400_RS04605 PF00348 Polyprenyl synthetase D5400_RS04610 PF00912 Transglycosylase D5400_RS04615 PF13417 Glutathione S-transferase, N-terminal domain D5400_RS04615 PF00043 Glutathione S-transferase, C-terminal domain D5400_RS04620 PF01783 Ribosomal L32p protein family D5400_RS04630 PF03928 Haem-degrading D5400_RS04635 PF05233 PHB accumulation regulatory domain D5400_RS04635 PF07879 PHB/PHA accumulation regulator DNA-binding domain D5400_RS04640 PF02803 Thiolase, C-terminal domain D5400_RS04640 PF00108 Thiolase, N-terminal domain D5400_RS04655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS04665 PF01494 FAD binding domain D5400_RS04670 PF07690 Major Facilitator Superfamily D5400_RS04675 PF00682 HMGL-like D5400_RS04675 PF02436 Conserved carboxylase domain D5400_RS04675 PF00364 Biotin-requiring enzyme D5400_RS04675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D5400_RS04675 PF02785 Biotin carboxylase C-terminal domain D5400_RS04675 PF00289 Biotin carboxylase, N-terminal domain D5400_RS04685 PF01965 DJ-1/PfpI family D5400_RS04725 PF13439 Glycosyltransferase Family 4 D5400_RS04725 PF00534 Glycosyl transferases group 1 D5400_RS04740 PF01872 RibD C-terminal domain D5400_RS04740 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D5400_RS04745 PF06165 Glycosyltransferase family 36 D5400_RS04745 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain D5400_RS04745 PF10091 Putative glucoamylase D5400_RS04755 PF02276 Photosynthetic reaction centre cytochrome C subunit D5400_RS04760 PF00124 Photosynthetic reaction centre protein D5400_RS04765 PF00124 Photosynthetic reaction centre protein D5400_RS04770 PF00556 Antenna complex alpha/beta subunit D5400_RS04775 PF00556 Antenna complex alpha/beta subunit D5400_RS04785 PF08369 Proto-chlorophyllide reductase 57 kD subunit D5400_RS04785 PF00148 Nitrogenase component 1 type Oxidoreductase D5400_RS04790 PF00148 Nitrogenase component 1 type Oxidoreductase D5400_RS04795 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family D5400_RS04805 PF16864 Dimerisation domain D5400_RS04805 PF00891 O-methyltransferase domain D5400_RS04810 PF00348 Polyprenyl synthetase D5400_RS04815 PF01593 Flavin containing amine oxidoreductase D5400_RS04830 PF01593 Flavin containing amine oxidoreductase D5400_RS04835 PF12697 Alpha/beta hydrolase family D5400_RS04840 PF17863 AAA lid domain D5400_RS04845 PF17863 AAA lid domain D5400_RS04845 PF01078 Magnesium chelatase, subunit ChlI D5400_RS04850 PF02780 Transketolase, C-terminal domain D5400_RS04850 PF02779 Transketolase, pyrimidine binding domain D5400_RS04850 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D5400_RS04870 PF01546 Peptidase family M20/M25/M40 D5400_RS04870 PF07687 Peptidase dimerisation domain D5400_RS04875 PF07943 Penicillin-binding protein 5, C-terminal domain D5400_RS04875 PF00768 D-alanyl-D-alanine carboxypeptidase D5400_RS04880 PF07683 Cobalamin synthesis protein cobW C-terminal domain D5400_RS04880 PF02492 CobW/HypB/UreG, nucleotide-binding domain D5400_RS04885 PF01206 Sulfurtransferase TusA D5400_RS04890 PF03734 L,D-transpeptidase catalytic domain D5400_RS04895 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D5400_RS04895 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D5400_RS04895 PF13288 DXP reductoisomerase C-terminal domain D5400_RS04900 PF00155 Aminotransferase class I and II D5400_RS04905 PF03450 CO dehydrogenase flavoprotein C-terminal domain D5400_RS04905 PF00941 FAD binding domain in molybdopterin dehydrogenase D5400_RS04910 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D5400_RS04910 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5400_RS04915 PF00111 2Fe-2S iron-sulfur cluster binding domain D5400_RS04915 PF01799 [2Fe-2S] binding domain D5400_RS04925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS04925 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS04925 PF09308 LuxQ, periplasmic D5400_RS04925 PF00072 Response regulator receiver domain D5400_RS04930 PF00196 Bacterial regulatory proteins, luxR family D5400_RS04930 PF00072 Response regulator receiver domain D5400_RS04935 PF00005 ABC transporter D5400_RS04935 PF00664 ABC transporter transmembrane region D5400_RS04940 PF00293 NUDIX domain D5400_RS04945 PF00155 Aminotransferase class I and II D5400_RS04950 PF12291 Protein of unknown function (DUF3623) D5400_RS04955 PF02915 Rubrerythrin D5400_RS04975 PF03967 Photosynthetic reaction centre, H-chain N-terminal region D5400_RS04975 PF05239 PRC-barrel domain D5400_RS04980 PF03209 PUCC protein D5400_RS04985 PF05175 Methyltransferase small domain D5400_RS04985 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus D5400_RS04990 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family D5400_RS04995 PF02514 CobN/Magnesium Chelatase D5400_RS04995 PF11965 Domain of unknown function (DUF3479) D5400_RS05000 PF08369 Proto-chlorophyllide reductase 57 kD subunit D5400_RS05000 PF00148 Nitrogenase component 1 type Oxidoreductase D5400_RS05005 PF00148 Nitrogenase component 1 type Oxidoreductase D5400_RS05010 PF07284 2-vinyl bacteriochlorophyllide hydratase (BCHF) D5400_RS05020 PF13426 PAS domain D5400_RS05020 PF13188 PAS domain D5400_RS05020 PF02954 Bacterial regulatory protein, Fis family D5400_RS05025 PF01040 UbiA prenyltransferase family D5400_RS05030 PF03209 PUCC protein D5400_RS05045 PF03073 TspO/MBR family D5400_RS05060 PF00583 Acetyltransferase (GNAT) family D5400_RS05065 PF00202 Aminotransferase class-III D5400_RS05070 PF06339 Ectoine synthase D5400_RS05075 PF00696 Amino acid kinase family D5400_RS05075 PF13840 ACT domain D5400_RS05080 PF12631 MnmE helical domain D5400_RS05080 PF01926 50S ribosome-binding GTPase D5400_RS05080 PF10396 GTP-binding protein TrmE N-terminus D5400_RS05085 PF00005 ABC transporter D5400_RS05090 PF02653 Branched-chain amino acid transport system / permease component D5400_RS05095 PF13407 Periplasmic binding protein domain D5400_RS05105 PF00202 Aminotransferase class-III D5400_RS05110 PF02423 Ornithine cyclodeaminase/mu-crystallin family D5400_RS05115 PF00291 Pyridoxal-phosphate dependent enzyme D5400_RS05120 PF01321 Creatinase/Prolidase N-terminal domain D5400_RS05120 PF00557 Metallopeptidase family M24 D5400_RS05125 PF01546 Peptidase family M20/M25/M40 D5400_RS05125 PF07687 Peptidase dimerisation domain D5400_RS05140 PF00106 short chain dehydrogenase D5400_RS05145 PF01979 Amidohydrolase family D5400_RS05150 PF00156 Phosphoribosyl transferase domain D5400_RS05155 PF03435 Saccharopine dehydrogenase NADP binding domain D5400_RS05155 PF16653 Saccharopine dehydrogenase C-terminal domain D5400_RS05165 PF00294 pfkB family carbohydrate kinase D5400_RS05170 PF00342 Phosphoglucose isomerase D5400_RS05185 PF00501 AMP-binding enzyme D5400_RS05185 PF13193 AMP-binding enzyme C-terminal domain D5400_RS05200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D5400_RS05200 PF07733 Bacterial DNA polymerase III alpha NTPase domain D5400_RS05200 PF14579 Helix-hairpin-helix motif D5400_RS05200 PF02811 PHP domain D5400_RS05200 PF01336 OB-fold nucleic acid binding domain D5400_RS05240 PF03976 Polyphosphate kinase 2 (PPK2) D5400_RS05245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS05245 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS05245 PF16736 Single Cache-like D5400_RS05245 PF00989 PAS fold D5400_RS05255 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS05260 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS05265 PF00005 ABC transporter D5400_RS05270 PF01895 PhoU domain D5400_RS05275 PF00072 Response regulator receiver domain D5400_RS05275 PF00486 Transcriptional regulatory protein, C terminal D5400_RS05285 PF00202 Aminotransferase class-III D5400_RS05290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D5400_RS05290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D5400_RS05295 PF01430 Hsp33 protein D5400_RS05305 PF00873 AcrB/AcrD/AcrF family D5400_RS05310 PF02386 Cation transport protein D5400_RS05315 PF04379 ApaG domain D5400_RS05325 PF01053 Cys/Met metabolism PLP-dependent enzyme D5400_RS05330 PF00692 dUTPase D5400_RS05355 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5400_RS05365 PF01921 tRNA synthetases class I (K) D5400_RS05375 PF01726 LexA DNA binding domain D5400_RS05375 PF00717 Peptidase S24-like D5400_RS05390 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5400_RS05390 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5400_RS05390 PF00378 Enoyl-CoA hydratase/isomerase D5400_RS05395 PF00108 Thiolase, N-terminal domain D5400_RS05395 PF02803 Thiolase, C-terminal domain D5400_RS05400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5400_RS05400 PF02770 Acyl-CoA dehydrogenase, middle domain D5400_RS05400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5400_RS05405 PF02770 Acyl-CoA dehydrogenase, middle domain D5400_RS05405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5400_RS05405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5400_RS05405 PF12806 Acetyl-CoA dehydrogenase C-terminal like D5400_RS05410 PF09278 MerR, DNA binding D5400_RS05410 PF00376 MerR family regulatory protein D5400_RS05420 PF01925 Sulfite exporter TauE/SafE D5400_RS05435 PF00271 Helicase conserved C-terminal domain D5400_RS05435 PF00270 DEAD/DEAH box helicase D5400_RS05435 PF08494 DEAD/H associated D5400_RS05440 PF08241 Methyltransferase domain D5400_RS05455 PF04675 DNA ligase N terminus D5400_RS05455 PF01068 ATP dependent DNA ligase domain D5400_RS05455 PF04679 ATP dependent DNA ligase C terminal region D5400_RS05475 PF00850 Histone deacetylase domain D5400_RS05480 PF01554 MatE D5400_RS05485 PF01180 Dihydroorotate dehydrogenase D5400_RS05500 PF07859 alpha/beta hydrolase fold D5400_RS05510 PF00072 Response regulator receiver domain D5400_RS05510 PF00196 Bacterial regulatory proteins, luxR family D5400_RS05515 PF00672 HAMP domain D5400_RS05515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS05515 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS05515 PF00072 Response regulator receiver domain D5400_RS05515 PF01627 Hpt domain D5400_RS05520 PF01741 Large-conductance mechanosensitive channel, MscL D5400_RS05525 PF00155 Aminotransferase class I and II D5400_RS05540 PF00581 Rhodanese-like domain D5400_RS05545 PF04143 Sulphur transport D5400_RS05560 PF00700 Bacterial flagellin C-terminal helical region D5400_RS05560 PF00669 Bacterial flagellin N-terminal helical region D5400_RS05580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D5400_RS05590 PF00815 Histidinol dehydrogenase D5400_RS05595 PF06793 Uncharacterised protein family (UPF0262) D5400_RS05605 PF01176 Translation initiation factor 1A / IF-1 D5400_RS05610 PF02545 Maf-like protein D5400_RS05615 PF03884 DNA gyrase inhibitor YacG D5400_RS05625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5400_RS05630 PF01037 Lrp/AsnC ligand binding domain D5400_RS05645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5400_RS05655 PF00072 Response regulator receiver domain D5400_RS05660 PF02895 Signal transducing histidine kinase, homodimeric domain D5400_RS05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS05660 PF01627 Hpt domain D5400_RS05660 PF01584 CheW-like domain D5400_RS05665 PF01584 CheW-like domain D5400_RS05670 PF03705 CheR methyltransferase, all-alpha domain D5400_RS05670 PF01739 CheR methyltransferase, SAM binding domain D5400_RS05675 PF00072 Response regulator receiver domain D5400_RS05675 PF01339 CheB methylesterase D5400_RS05680 PF00072 Response regulator receiver domain D5400_RS05685 PF03975 CheD chemotactic sensory transduction D5400_RS05695 PF01514 Secretory protein of YscJ/FliF family D5400_RS05695 PF08345 Flagellar M-ring protein C-terminal D5400_RS05705 PF00196 Bacterial regulatory proteins, luxR family D5400_RS05705 PF03472 Autoinducer binding domain D5400_RS05720 PF01312 FlhB HrpN YscU SpaS Family D5400_RS05725 PF14841 FliG middle domain D5400_RS05725 PF01706 FliG C-terminal domain D5400_RS05725 PF14842 FliG N-terminal domain D5400_RS05730 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D5400_RS05735 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D5400_RS05740 PF01618 MotA/TolQ/ExbB proton channel family D5400_RS05750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5400_RS05750 PF00460 Flagella basal body rod protein D5400_RS05755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5400_RS05755 PF18269 T3SS EscN ATPase C-terminal domain D5400_RS05765 PF00460 Flagella basal body rod protein D5400_RS05770 PF00460 Flagella basal body rod protein D5400_RS05770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5400_RS05775 PF02049 Flagellar hook-basal body complex protein FliE D5400_RS05780 PF00460 Flagella basal body rod protein D5400_RS05780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5400_RS05785 PF13144 Chaperone for flagella basal body P-ring formation D5400_RS05790 PF02119 Flagellar P-ring protein D5400_RS05800 PF02107 Flagellar L-ring protein D5400_RS05810 PF00813 FliP family D5400_RS05815 PF00700 Bacterial flagellin C-terminal helical region D5400_RS05815 PF00669 Bacterial flagellin N-terminal helical region D5400_RS05820 PF00669 Bacterial flagellin N-terminal helical region D5400_RS05820 PF00700 Bacterial flagellin C-terminal helical region D5400_RS05830 PF03102 NeuB family D5400_RS05830 PF08666 SAF domain D5400_RS05845 PF02348 Cytidylyltransferase D5400_RS05850 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D5400_RS05855 PF02719 Polysaccharide biosynthesis protein D5400_RS05865 PF00691 OmpA family D5400_RS05865 PF13677 Membrane MotB of proton-channel complex MotA/MotB D5400_RS05885 PF00486 Transcriptional regulatory protein, C terminal D5400_RS05890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5400_RS05890 PF07559 Flagellar basal body protein FlaE D5400_RS05890 PF00460 Flagella basal body rod protein D5400_RS05910 PF07378 Flagellar protein FlbT D5400_RS05915 PF03963 Flagellar hook capping protein - N-terminal region D5400_RS05920 PF01313 Bacterial export proteins, family 3 D5400_RS05925 PF00771 FHIPEP family D5400_RS05930 PF01311 Bacterial export proteins, family 1 D5400_RS05955 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D5400_RS05955 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D5400_RS05960 PF00356 Bacterial regulatory proteins, lacI family D5400_RS05965 PF01547 Bacterial extracellular solute-binding protein D5400_RS05970 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS05975 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS05980 PF00128 Alpha amylase, catalytic domain D5400_RS05985 PF17912 MalK OB fold domain D5400_RS05985 PF00005 ABC transporter D5400_RS05985 PF03459 TOBE domain D5400_RS05990 PF00920 Dehydratase family D5400_RS05995 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D5400_RS06000 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D5400_RS06000 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D5400_RS06005 PF01266 FAD dependent oxidoreductase D5400_RS06010 PF00120 Glutamine synthetase, catalytic domain D5400_RS06025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5400_RS06025 PF00672 HAMP domain D5400_RS06030 PF01569 PAP2 superfamily D5400_RS06050 PF00463 Isocitrate lyase family D5400_RS06055 PF09856 Predicted transcriptional regulator (DUF2083) D5400_RS06055 PF01381 Helix-turn-helix D5400_RS06055 PF06114 IrrE N-terminal-like domain D5400_RS06060 PF13416 Bacterial extracellular solute-binding protein D5400_RS06065 PF08402 TOBE domain D5400_RS06065 PF00005 ABC transporter D5400_RS06070 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS06075 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS06085 PF00501 AMP-binding enzyme D5400_RS06085 PF13193 AMP-binding enzyme C-terminal domain D5400_RS06090 PF13426 PAS domain D5400_RS06090 PF13188 PAS domain D5400_RS06090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS06090 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS06090 PF00989 PAS fold D5400_RS06115 PF00459 Inositol monophosphatase family D5400_RS06120 PF08666 SAF domain D5400_RS06120 PF03102 NeuB family D5400_RS06155 PF16363 GDP-mannose 4,6 dehydratase D5400_RS06160 PF16363 GDP-mannose 4,6 dehydratase D5400_RS06165 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D5400_RS06170 PF00483 Nucleotidyl transferase D5400_RS06175 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D5400_RS06175 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D5400_RS06175 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D5400_RS06185 PF01434 Peptidase family M41 D5400_RS06185 PF17862 AAA+ lid domain D5400_RS06185 PF00004 ATPase family associated with various cellular activities (AAA) D5400_RS06200 PF13244 Domain of unknown function (DUF4040) D5400_RS06200 PF00361 Proton-conducting membrane transporter D5400_RS06200 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D5400_RS06205 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D5400_RS06210 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D5400_RS06215 PF00361 Proton-conducting membrane transporter D5400_RS06230 PF03334 Na+/H+ antiporter subunit D5400_RS06235 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS06235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS06240 PF00072 Response regulator receiver domain D5400_RS06240 PF00158 Sigma-54 interaction domain D5400_RS06240 PF02954 Bacterial regulatory protein, Fis family D5400_RS06245 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D5400_RS06245 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D5400_RS06245 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D5400_RS06245 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D5400_RS06250 PF00483 Nucleotidyl transferase D5400_RS06250 PF01050 Mannose-6-phosphate isomerase D5400_RS06255 PF00005 ABC transporter D5400_RS06255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5400_RS06260 PF12911 N-terminal TM domain of oligopeptide transport permease C D5400_RS06260 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS06265 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS06270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5400_RS06280 PF00474 Sodium:solute symporter family D5400_RS06295 PF02254 TrkA-N domain D5400_RS06295 PF00999 Sodium/hydrogen exchanger family D5400_RS06300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D5400_RS06300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5400_RS06310 PF03853 YjeF-related protein N-terminus D5400_RS06310 PF01256 Carbohydrate kinase D5400_RS06325 PF00128 Alpha amylase, catalytic domain D5400_RS06340 PF00916 Sulfate permease family D5400_RS06340 PF01740 STAS domain D5400_RS06350 PF04143 Sulphur transport D5400_RS06360 PF00753 Metallo-beta-lactamase superfamily D5400_RS06360 PF04273 Putative phosphatase (DUF442) D5400_RS06370 PF00005 ABC transporter D5400_RS06375 PF00005 ABC transporter D5400_RS06375 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5400_RS06385 PF02653 Branched-chain amino acid transport system / permease component D5400_RS06395 PF00501 AMP-binding enzyme D5400_RS06395 PF13193 AMP-binding enzyme C-terminal domain D5400_RS06405 PF00171 Aldehyde dehydrogenase family D5400_RS06415 PF00378 Enoyl-CoA hydratase/isomerase D5400_RS06425 PF00970 Oxidoreductase FAD-binding domain D5400_RS06425 PF00175 Oxidoreductase NAD-binding domain D5400_RS06425 PF00037 4Fe-4S binding domain D5400_RS06435 PF01202 Shikimate kinase D5400_RS06440 PF00378 Enoyl-CoA hydratase/isomerase D5400_RS06445 PF00378 Enoyl-CoA hydratase/isomerase D5400_RS06445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5400_RS06445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5400_RS06460 PF02798 Glutathione S-transferase, N-terminal domain D5400_RS06460 PF00043 Glutathione S-transferase, C-terminal domain D5400_RS06465 PF07883 Cupin domain D5400_RS06470 PF13193 AMP-binding enzyme C-terminal domain D5400_RS06470 PF00501 AMP-binding enzyme D5400_RS06475 PF01494 FAD binding domain D5400_RS06490 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) D5400_RS06500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS06500 PF03466 LysR substrate binding domain D5400_RS06505 PF01322 Cytochrome C' D5400_RS06510 PF00072 Response regulator receiver domain D5400_RS06510 PF00196 Bacterial regulatory proteins, luxR family D5400_RS06515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS06515 PF07730 Histidine kinase D5400_RS06525 PF00664 ABC transporter transmembrane region D5400_RS06525 PF00005 ABC transporter D5400_RS06535 PF00529 HlyD membrane-fusion protein of T1SS D5400_RS06535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5400_RS06550 PF00482 Type II secretion system (T2SS), protein F D5400_RS06555 PF07963 Prokaryotic N-terminal methylation motif D5400_RS06555 PF08334 Type II secretion system (T2SS), protein G D5400_RS06595 PF00437 Type II/IV secretion system protein D5400_RS06595 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D5400_RS06600 PF03958 Bacterial type II/III secretion system short domain D5400_RS06600 PF00263 Bacterial type II and III secretion system protein D5400_RS06610 PF05384 Sensor protein DegS D5400_RS06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS06610 PF07730 Histidine kinase D5400_RS06615 PF00196 Bacterial regulatory proteins, luxR family D5400_RS06615 PF00072 Response regulator receiver domain D5400_RS06625 PF00149 Calcineurin-like phosphoesterase D5400_RS06630 PF13514 AAA domain D5400_RS06635 PF13426 PAS domain D5400_RS06635 PF07568 Histidine kinase D5400_RS06635 PF13581 Histidine kinase-like ATPase domain D5400_RS06655 PF00970 Oxidoreductase FAD-binding domain D5400_RS06655 PF00042 Globin D5400_RS06655 PF00175 Oxidoreductase NAD-binding domain D5400_RS06665 PF00115 Cytochrome C and Quinol oxidase polypeptide I D5400_RS06670 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D5400_RS06670 PF00034 Cytochrome c D5400_RS06670 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D5400_RS06690 PF06628 Catalase-related immune-responsive D5400_RS06690 PF18011 C-terminal domain found in long catalases D5400_RS06690 PF00199 Catalase D5400_RS06695 PF00440 Bacterial regulatory proteins, tetR family D5400_RS06700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5400_RS06705 PF00873 AcrB/AcrD/AcrF family D5400_RS06710 PF00210 Ferritin-like domain D5400_RS06715 PF03480 Bacterial extracellular solute-binding protein, family 7 D5400_RS06725 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS06735 PF07729 FCD domain D5400_RS06735 PF00392 Bacterial regulatory proteins, gntR family D5400_RS06745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS06745 PF03466 LysR substrate binding domain D5400_RS06755 PF01037 Lrp/AsnC ligand binding domain D5400_RS06765 PF01381 Helix-turn-helix D5400_RS06765 PF06114 IrrE N-terminal-like domain D5400_RS06765 PF09856 Predicted transcriptional regulator (DUF2083) D5400_RS06770 PF00155 Aminotransferase class I and II D5400_RS06775 PF08240 Alcohol dehydrogenase GroES-like domain D5400_RS06775 PF00107 Zinc-binding dehydrogenase D5400_RS06780 PF13454 FAD-NAD(P)-binding D5400_RS06800 PF13416 Bacterial extracellular solute-binding protein D5400_RS06805 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS06810 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS06815 PF08402 TOBE domain D5400_RS06815 PF00005 ABC transporter D5400_RS06820 PF00270 DEAD/DEAH box helicase D5400_RS06820 PF00271 Helicase conserved C-terminal domain D5400_RS06825 PF04143 Sulphur transport D5400_RS06845 PF10518 TAT (twin-arginine translocation) pathway signal sequence D5400_RS06845 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding D5400_RS06845 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5400_RS06865 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS06870 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS06875 PF00005 ABC transporter D5400_RS06875 PF08402 TOBE domain D5400_RS06885 PF00171 Aldehyde dehydrogenase family D5400_RS06890 PF00491 Arginase family D5400_RS06905 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment D5400_RS06915 PF17763 Glutaminase/Asparaginase C-terminal domain D5400_RS06915 PF00710 Asparaginase, N-terminal D5400_RS06920 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS06925 PF00005 ABC transporter D5400_RS06935 PF00392 Bacterial regulatory proteins, gntR family D5400_RS06945 PF01261 Xylose isomerase-like TIM barrel D5400_RS06945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5400_RS06950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D5400_RS06950 PF01488 Shikimate / quinate 5-dehydrogenase D5400_RS06950 PF08501 Shikimate dehydrogenase substrate binding domain D5400_RS06955 PF07729 FCD domain D5400_RS06955 PF00392 Bacterial regulatory proteins, gntR family D5400_RS06960 PF00392 Bacterial regulatory proteins, gntR family D5400_RS06960 PF07729 FCD domain D5400_RS06965 PF03480 Bacterial extracellular solute-binding protein, family 7 D5400_RS06975 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS06980 PF01220 Dehydroquinase class II D5400_RS06985 PF00171 Aldehyde dehydrogenase family D5400_RS06990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5400_RS06995 PF00920 Dehydratase family D5400_RS07000 PF02653 Branched-chain amino acid transport system / permease component D5400_RS07005 PF00005 ABC transporter D5400_RS07010 PF13407 Periplasmic binding protein domain D5400_RS07015 PF08450 SMP-30/Gluconolactonase/LRE-like region D5400_RS07020 PF02653 Branched-chain amino acid transport system / permease component D5400_RS07025 PF02653 Branched-chain amino acid transport system / permease component D5400_RS07030 PF00005 ABC transporter D5400_RS07035 PF13407 Periplasmic binding protein domain D5400_RS07045 PF01263 Aldose 1-epimerase D5400_RS07050 PF03466 LysR substrate binding domain D5400_RS07050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS07060 PF07702 UTRA domain D5400_RS07060 PF00392 Bacterial regulatory proteins, gntR family D5400_RS07065 PF06754 Phosphonate metabolism protein PhnG D5400_RS07070 PF05845 Bacterial phosphonate metabolism protein (PhnH) D5400_RS07075 PF05861 Bacterial phosphonate metabolism protein (PhnI) D5400_RS07080 PF06007 Phosphonate metabolism protein PhnJ D5400_RS07085 PF00005 ABC transporter D5400_RS07090 PF00005 ABC transporter D5400_RS07095 PF00132 Bacterial transferase hexapeptide (six repeats) D5400_RS07105 PF00005 ABC transporter D5400_RS07110 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS07115 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS07125 PF09992 Phosphodiester glycosidase D5400_RS07140 PF03193 RsgA GTPase D5400_RS07145 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS07155 PF00005 ABC transporter D5400_RS07155 PF12848 ABC transporter D5400_RS07175 PF01258 Prokaryotic dksA/traR C4-type zinc finger D5400_RS07210 PF13188 PAS domain D5400_RS07210 PF00563 EAL domain D5400_RS07210 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS07210 PF03707 Bacterial signalling protein N terminal repeat D5400_RS07220 PF01979 Amidohydrolase family D5400_RS07235 PF00005 ABC transporter D5400_RS07250 PF07969 Amidohydrolase family D5400_RS07255 PF00440 Bacterial regulatory proteins, tetR family D5400_RS07260 PF00248 Aldo/keto reductase family D5400_RS07265 PF01699 Sodium/calcium exchanger protein D5400_RS07275 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D5400_RS07275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5400_RS07290 PF00210 Ferritin-like domain D5400_RS07295 PF08220 DeoR-like helix-turn-helix domain D5400_RS07295 PF00455 DeoR C terminal sensor domain D5400_RS07300 PF01266 FAD dependent oxidoreductase D5400_RS07300 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D5400_RS07305 PF00005 ABC transporter D5400_RS07305 PF08402 TOBE domain D5400_RS07310 PF17912 MalK OB fold domain D5400_RS07310 PF00005 ABC transporter D5400_RS07315 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS07320 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS07335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5400_RS07335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5400_RS07345 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS07345 PF00563 EAL domain D5400_RS07345 PF03707 Bacterial signalling protein N terminal repeat D5400_RS07345 PF13188 PAS domain D5400_RS07355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D5400_RS07355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D5400_RS07355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D5400_RS07355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D5400_RS07360 PF02082 Transcriptional regulator D5400_RS07365 PF01022 Bacterial regulatory protein, arsR family D5400_RS07375 PF00265 Thymidine kinase D5400_RS07380 PF00034 Cytochrome c D5400_RS07390 PF01037 Lrp/AsnC ligand binding domain D5400_RS07395 PF01619 Proline dehydrogenase D5400_RS07395 PF00171 Aldehyde dehydrogenase family D5400_RS07395 PF14850 DNA-binding domain of Proline dehydrogenase D5400_RS07395 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D5400_RS07400 PF01268 Formate--tetrahydrofolate ligase D5400_RS07415 PF04715 Anthranilate synthase component I, N terminal region D5400_RS07415 PF00425 chorismate binding enzyme D5400_RS07415 PF00117 Glutamine amidotransferase class-I D5400_RS07420 PF16916 Dimerisation domain of Zinc Transporter D5400_RS07420 PF01545 Cation efflux family D5400_RS07425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5400_RS07425 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D5400_RS07425 PF02770 Acyl-CoA dehydrogenase, middle domain D5400_RS07430 PF01638 HxlR-like helix-turn-helix D5400_RS07440 PF09819 ABC-type cobalt transport system, permease component D5400_RS07445 PF00005 ABC transporter D5400_RS07455 PF00005 ABC transporter D5400_RS07455 PF13732 Domain of unknown function (DUF4162) D5400_RS07460 PF01061 ABC-2 type transporter D5400_RS07480 PF00682 HMGL-like D5400_RS07480 PF08502 LeuA allosteric (dimerisation) domain D5400_RS07485 PF00561 alpha/beta hydrolase fold D5400_RS07485 PF00364 Biotin-requiring enzyme D5400_RS07500 PF00293 NUDIX domain D5400_RS07500 PF13344 Haloacid dehalogenase-like hydrolase D5400_RS07505 PF13409 Glutathione S-transferase, N-terminal domain D5400_RS07530 PF07726 ATPase family associated with various cellular activities (AAA) D5400_RS07530 PF17863 AAA lid domain D5400_RS07540 PF00293 NUDIX domain D5400_RS07545 PF13735 tRNA nucleotidyltransferase domain 2 putative D5400_RS07545 PF12627 Probable RNA and SrmB- binding site of polymerase A D5400_RS07545 PF01743 Poly A polymerase head domain D5400_RS07555 PF01218 Coproporphyrinogen III oxidase D5400_RS07565 PF00588 SpoU rRNA Methylase family D5400_RS07570 PF00664 ABC transporter transmembrane region D5400_RS07570 PF00005 ABC transporter D5400_RS07575 PF00005 ABC transporter D5400_RS07575 PF00664 ABC transporter transmembrane region D5400_RS07580 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D5400_RS07580 PF00355 Rieske [2Fe-2S] domain D5400_RS07585 PF00032 Cytochrome b(C-terminal)/b6/petD D5400_RS07585 PF00033 Cytochrome b/b6/petB D5400_RS07590 PF02167 Cytochrome C1 family D5400_RS07590 PF00032 Cytochrome b(C-terminal)/b6/petD D5400_RS07590 PF00033 Cytochrome b/b6/petB D5400_RS07595 PF00156 Phosphoribosyl transferase domain D5400_RS07610 PF06071 Protein of unknown function (DUF933) D5400_RS07610 PF01926 50S ribosome-binding GTPase D5400_RS07615 PF01195 Peptidyl-tRNA hydrolase D5400_RS07620 PF01386 Ribosomal L25p family D5400_RS07620 PF14693 Ribosomal protein TL5, C-terminal domain D5400_RS07625 PF02417 Chromate transporter D5400_RS07630 PF00920 Dehydratase family D5400_RS07635 PF14572 Phosphoribosyl synthetase-associated domain D5400_RS07635 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D5400_RS07650 PF02578 Multi-copper polyphenol oxidoreductase laccase D5400_RS07660 PF01790 Prolipoprotein diacylglyceryl transferase D5400_RS07675 PF03807 NADP oxidoreductase coenzyme F420-dependent D5400_RS07675 PF14748 Pyrroline-5-carboxylate reductase dimerisation D5400_RS07680 PF01588 Putative tRNA binding domain D5400_RS07685 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS07690 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS07690 PF00672 HAMP domain D5400_RS07690 PF16527 Two-component sensor protein CpxA, periplasmic domain D5400_RS07695 PF00486 Transcriptional regulatory protein, C terminal D5400_RS07695 PF00072 Response regulator receiver domain D5400_RS07700 PF12802 MarR family D5400_RS07705 PF01063 Amino-transferase class IV D5400_RS07715 PF00753 Metallo-beta-lactamase superfamily D5400_RS07725 PF00313 'Cold-shock' DNA-binding domain D5400_RS07745 PF00563 EAL domain D5400_RS07745 PF10388 EAL-domain associated signalling protein domain D5400_RS07750 PF00155 Aminotransferase class I and II D5400_RS07755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS07755 PF03466 LysR substrate binding domain D5400_RS07760 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5400_RS07765 PF01037 Lrp/AsnC ligand binding domain D5400_RS07770 PF03449 Transcription elongation factor, N-terminal D5400_RS07770 PF01272 Transcription elongation factor, GreA/GreB, C-term D5400_RS07775 PF02142 MGS-like domain D5400_RS07775 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D5400_RS07775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D5400_RS07785 PF04228 Putative neutral zinc metallopeptidase D5400_RS07795 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D5400_RS07795 PF00117 Glutamine amidotransferase class-I D5400_RS07815 PF04542 Sigma-70 region 2 D5400_RS07815 PF04539 Sigma-70 region 3 D5400_RS07815 PF04546 Sigma-70, non-essential region D5400_RS07815 PF04545 Sigma-70, region 4 D5400_RS07815 PF00140 Sigma-70 factor, region 1.2 D5400_RS07815 PF03979 Sigma-70 factor, region 1.1 D5400_RS07820 PF00440 Bacterial regulatory proteins, tetR family D5400_RS07830 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS07835 PF01894 Uncharacterised protein family UPF0047 D5400_RS07860 PF04402 Protein of unknown function (DUF541) D5400_RS07875 PF12833 Helix-turn-helix domain D5400_RS07875 PF06719 AraC-type transcriptional regulator N-terminus D5400_RS07880 PF00398 Ribosomal RNA adenine dimethylase D5400_RS07885 PF00106 short chain dehydrogenase D5400_RS07895 PF00072 Response regulator receiver domain D5400_RS07900 PF01627 Hpt domain D5400_RS07900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS07900 PF00072 Response regulator receiver domain D5400_RS07900 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS07900 PF17149 Periplasmic sensor domain found in signal transduction proteins D5400_RS07900 PF00672 HAMP domain D5400_RS07915 PF04199 Putative cyclase D5400_RS07920 PF00106 short chain dehydrogenase D5400_RS07930 PF13193 AMP-binding enzyme C-terminal domain D5400_RS07930 PF00501 AMP-binding enzyme D5400_RS07935 PF00866 Ring hydroxylating beta subunit D5400_RS07940 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D5400_RS07940 PF00355 Rieske [2Fe-2S] domain D5400_RS07945 PF00970 Oxidoreductase FAD-binding domain D5400_RS07945 PF00111 2Fe-2S iron-sulfur cluster binding domain D5400_RS07960 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS07975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5400_RS07975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5400_RS07990 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS08005 PF10518 TAT (twin-arginine translocation) pathway signal sequence D5400_RS08005 PF01799 [2Fe-2S] binding domain D5400_RS08005 PF00111 2Fe-2S iron-sulfur cluster binding domain D5400_RS08010 PF03450 CO dehydrogenase flavoprotein C-terminal domain D5400_RS08010 PF00941 FAD binding domain in molybdopterin dehydrogenase D5400_RS08015 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D5400_RS08015 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5400_RS08020 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS08030 PF03480 Bacterial extracellular solute-binding protein, family 7 D5400_RS08045 PF02597 ThiS family D5400_RS08055 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D5400_RS08060 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS08065 PF00005 ABC transporter D5400_RS08070 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS08075 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D5400_RS08080 PF06299 Protein of unknown function (DUF1045) D5400_RS08085 PF07969 Amidohydrolase family D5400_RS08095 PF00571 CBS domain D5400_RS08095 PF00005 ABC transporter D5400_RS08100 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS08105 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D5400_RS08110 PF00440 Bacterial regulatory proteins, tetR family D5400_RS08110 PF13977 BetI-type transcriptional repressor, C-terminal D5400_RS08115 PF12411 Choline sulfatase enzyme C terminal D5400_RS08115 PF00884 Sulfatase D5400_RS08120 PF00171 Aldehyde dehydrogenase family D5400_RS08125 PF00732 GMC oxidoreductase D5400_RS08125 PF05199 GMC oxidoreductase D5400_RS08130 PF05025 RbsD / FucU transport protein family D5400_RS08140 PF00205 Thiamine pyrophosphate enzyme, central domain D5400_RS08140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5400_RS08140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5400_RS08145 PF12146 Serine aminopeptidase, S33 D5400_RS08155 PF12848 ABC transporter D5400_RS08155 PF00005 ABC transporter D5400_RS08165 PF03551 Transcriptional regulator PadR-like family D5400_RS08165 PF13847 Methyltransferase domain D5400_RS08170 PF02219 Methylenetetrahydrofolate reductase D5400_RS08180 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D5400_RS08180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D5400_RS08195 PF01183 Glycosyl hydrolases family 25 D5400_RS08210 PF00563 EAL domain D5400_RS08210 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS08210 PF08447 PAS fold D5400_RS08210 PF08448 PAS fold D5400_RS08215 PF01968 Hydantoinase/oxoprolinase D5400_RS08215 PF05378 Hydantoinase/oxoprolinase N-terminal region D5400_RS08225 PF00226 DnaJ domain D5400_RS08225 PF05099 Tellurite resistance protein TerB D5400_RS08230 PF01510 N-acetylmuramoyl-L-alanine amidase D5400_RS08245 PF02381 MraZ protein, putative antitoxin-like D5400_RS08250 PF01795 MraW methylase family D5400_RS08260 PF00905 Penicillin binding protein transpeptidase domain D5400_RS08260 PF03717 Penicillin-binding Protein dimerisation domain D5400_RS08265 PF02875 Mur ligase family, glutamate ligase domain D5400_RS08265 PF01225 Mur ligase family, catalytic domain D5400_RS08265 PF08245 Mur ligase middle domain D5400_RS08270 PF08245 Mur ligase middle domain D5400_RS08270 PF02875 Mur ligase family, glutamate ligase domain D5400_RS08270 PF01225 Mur ligase family, catalytic domain D5400_RS08275 PF00953 Glycosyl transferase family 4 D5400_RS08275 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D5400_RS08280 PF08245 Mur ligase middle domain D5400_RS08280 PF02875 Mur ligase family, glutamate ligase domain D5400_RS08285 PF01098 Cell cycle protein D5400_RS08290 PF03033 Glycosyltransferase family 28 N-terminal domain D5400_RS08290 PF04101 Glycosyltransferase family 28 C-terminal domain D5400_RS08295 PF02875 Mur ligase family, glutamate ligase domain D5400_RS08295 PF01225 Mur ligase family, catalytic domain D5400_RS08295 PF08245 Mur ligase middle domain D5400_RS08300 PF01565 FAD binding domain D5400_RS08300 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D5400_RS08305 PF07478 D-ala D-ala ligase C-terminus D5400_RS08305 PF01820 D-ala D-ala ligase N-terminus D5400_RS08310 PF08478 POTRA domain, FtsQ-type D5400_RS08310 PF03799 Cell division protein FtsQ D5400_RS08315 PF02491 SHS2 domain inserted in FTSA D5400_RS08320 PF00091 Tubulin/FtsZ family, GTPase domain D5400_RS08320 PF12327 FtsZ family, C-terminal domain D5400_RS08325 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D5400_RS08330 PF13525 Outer membrane lipoprotein D5400_RS08335 PF02463 RecF/RecN/SMC N terminal domain D5400_RS08340 PF12826 Helix-hairpin-helix motif D5400_RS08340 PF01653 NAD-dependent DNA ligase adenylation domain D5400_RS08340 PF03120 NAD-dependent DNA ligase OB-fold domain D5400_RS08340 PF00533 BRCA1 C Terminus (BRCT) domain D5400_RS08355 PF01321 Creatinase/Prolidase N-terminal domain D5400_RS08355 PF00557 Metallopeptidase family M24 D5400_RS08365 PF02630 SCO1/SenC D5400_RS08370 PF00132 Bacterial transferase hexapeptide (six repeats) D5400_RS08375 PF00171 Aldehyde dehydrogenase family D5400_RS08385 PF00034 Cytochrome c D5400_RS08390 PF07995 Glucose / Sorbosone dehydrogenase D5400_RS08395 PF05443 ROS/MUCR transcriptional regulator protein D5400_RS08405 PF13361 UvrD-like helicase C-terminal domain D5400_RS08405 PF00580 UvrD/REP helicase N-terminal domain D5400_RS08420 PF00082 Subtilase family D5400_RS08425 PF01738 Dienelactone hydrolase family D5400_RS08435 PF02308 MgtC family D5400_RS08445 PF02735 Ku70/Ku80 beta-barrel domain D5400_RS08450 PF13298 DNA polymerase Ligase (LigD) D5400_RS08450 PF01068 ATP dependent DNA ligase domain D5400_RS08450 PF04679 ATP dependent DNA ligase C terminal region D5400_RS08460 PF00873 AcrB/AcrD/AcrF family D5400_RS08465 PF00654 Voltage gated chloride channel D5400_RS08475 PF01565 FAD binding domain D5400_RS08475 PF02913 FAD linked oxidases, C-terminal domain D5400_RS08515 PF00303 Thymidylate synthase D5400_RS08520 PF00186 Dihydrofolate reductase D5400_RS08525 PF01145 SPFH domain / Band 7 family D5400_RS08530 PF01145 SPFH domain / Band 7 family D5400_RS08540 PF13180 PDZ domain D5400_RS08545 PF13302 Acetyltransferase (GNAT) domain D5400_RS08560 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS08570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5400_RS08570 PF00205 Thiamine pyrophosphate enzyme, central domain D5400_RS08570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5400_RS08575 PF10369 Small subunit of acetolactate synthase D5400_RS08575 PF01842 ACT domain D5400_RS08580 PF01810 LysE type translocator D5400_RS08585 PF07704 Rv0623-like transcription factor D5400_RS08590 PF01850 PIN domain D5400_RS08595 PF13538 UvrD-like helicase C-terminal domain D5400_RS08595 PF14490 Helix-hairpin-helix containing domain D5400_RS08595 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain D5400_RS08600 PF00487 Fatty acid desaturase D5400_RS08605 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D5400_RS08610 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D5400_RS08615 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D5400_RS08620 PF01467 Cytidylyltransferase-like D5400_RS08620 PF00294 pfkB family carbohydrate kinase D5400_RS08630 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D5400_RS08630 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D5400_RS08635 PF01047 MarR family D5400_RS08640 PF02566 OsmC-like protein D5400_RS08645 PF16123 Hydroxyacylglutathione hydrolase C-terminus D5400_RS08645 PF00753 Metallo-beta-lactamase superfamily D5400_RS08650 PF00939 Sodium:sulfate symporter transmembrane region D5400_RS08670 PF07886 BA14K-like protein D5400_RS08680 PF02567 Phenazine biosynthesis-like protein D5400_RS08710 PF16868 NMT1-like family D5400_RS08720 PF00582 Universal stress protein family D5400_RS08745 PF04239 Protein of unknown function (DUF421) D5400_RS08750 PF10011 Predicted membrane protein (DUF2254) D5400_RS08755 PF01740 STAS domain D5400_RS08755 PF00916 Sulfate permease family D5400_RS08760 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase D5400_RS08760 PF03033 Glycosyltransferase family 28 N-terminal domain D5400_RS08780 PF03783 Curli production assembly/transport component CsgG D5400_RS08815 PF02515 CoA-transferase family III D5400_RS08820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5400_RS08820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5400_RS08820 PF02770 Acyl-CoA dehydrogenase, middle domain D5400_RS08825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS08825 PF03466 LysR substrate binding domain D5400_RS08845 PF13439 Glycosyltransferase Family 4 D5400_RS08845 PF00534 Glycosyl transferases group 1 D5400_RS08860 PF13580 SIS domain D5400_RS08870 PF01266 FAD dependent oxidoreductase D5400_RS08875 PF00248 Aldo/keto reductase family D5400_RS08905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5400_RS08905 PF02770 Acyl-CoA dehydrogenase, middle domain D5400_RS08905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5400_RS08920 PF01039 Carboxyl transferase domain D5400_RS08925 PF00364 Biotin-requiring enzyme D5400_RS08925 PF02785 Biotin carboxylase C-terminal domain D5400_RS08925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D5400_RS08925 PF00289 Biotin carboxylase, N-terminal domain D5400_RS08940 PF01266 FAD dependent oxidoreductase D5400_RS08940 PF01571 Aminomethyltransferase folate-binding domain D5400_RS08940 PF16350 FAD dependent oxidoreductase central domain D5400_RS08940 PF08669 Glycine cleavage T-protein C-terminal barrel domain D5400_RS08955 PF07549 SecD/SecF GG Motif D5400_RS08955 PF02355 Protein export membrane protein D5400_RS08960 PF01965 DJ-1/PfpI family D5400_RS08960 PF12833 Helix-turn-helix domain D5400_RS08970 PF03466 LysR substrate binding domain D5400_RS08970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS08975 PF00970 Oxidoreductase FAD-binding domain D5400_RS08975 PF00111 2Fe-2S iron-sulfur cluster binding domain D5400_RS08975 PF00175 Oxidoreductase NAD-binding domain D5400_RS08985 PF02310 B12 binding domain D5400_RS08985 PF02607 B12 binding domain D5400_RS08985 PF02965 Vitamin B12 dependent methionine synthase, activation domain D5400_RS08985 PF00809 Pterin binding enzyme D5400_RS08985 PF02574 Homocysteine S-methyltransferase D5400_RS08990 PF02219 Methylenetetrahydrofolate reductase D5400_RS09010 PF02607 B12 binding domain D5400_RS09010 PF02310 B12 binding domain D5400_RS09015 PF06253 Trimethylamine methyltransferase (MTTB) D5400_RS09020 PF00809 Pterin binding enzyme D5400_RS09020 PF02574 Homocysteine S-methyltransferase D5400_RS09020 PF02965 Vitamin B12 dependent methionine synthase, activation domain D5400_RS09020 PF02310 B12 binding domain D5400_RS09020 PF02607 B12 binding domain D5400_RS09030 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D5400_RS09030 PF10531 SLBB domain D5400_RS09030 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D5400_RS09040 PF00384 Molybdopterin oxidoreductase D5400_RS09040 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D5400_RS09040 PF01568 Molydopterin dinucleotide binding domain D5400_RS09040 PF12838 4Fe-4S dicluster domain D5400_RS09040 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D5400_RS09045 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D5400_RS09045 PF07685 CobB/CobQ-like glutamine amidotransferase domain D5400_RS09050 PF04955 HupE / UreJ protein D5400_RS09055 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase D5400_RS09060 PF07683 Cobalamin synthesis protein cobW C-terminal domain D5400_RS09060 PF02492 CobW/HypB/UreG, nucleotide-binding domain D5400_RS09065 PF02514 CobN/Magnesium Chelatase D5400_RS09075 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D5400_RS09080 PF07995 Glucose / Sorbosone dehydrogenase D5400_RS09085 PF01925 Sulfite exporter TauE/SafE D5400_RS09095 PF01903 CbiX D5400_RS09100 PF02570 Precorrin-8X methylmutase D5400_RS09105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5400_RS09110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5400_RS09115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5400_RS09120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5400_RS09125 PF02571 Precorrin-6x reductase CbiJ/CobK D5400_RS09130 PF01888 CbiD D5400_RS09135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5400_RS09140 PF07685 CobB/CobQ-like glutamine amidotransferase domain D5400_RS09140 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D5400_RS09145 PF00155 Aminotransferase class I and II D5400_RS09150 PF03186 CobD/Cbib protein D5400_RS09160 PF08240 Alcohol dehydrogenase GroES-like domain D5400_RS09160 PF00107 Zinc-binding dehydrogenase D5400_RS09165 PF02801 Beta-ketoacyl synthase, C-terminal domain D5400_RS09165 PF00109 Beta-ketoacyl synthase, N-terminal domain D5400_RS09170 PF00109 Beta-ketoacyl synthase, N-terminal domain D5400_RS09170 PF02801 Beta-ketoacyl synthase, C-terminal domain D5400_RS09175 PF07977 FabA-like domain D5400_RS09180 PF00550 Phosphopantetheine attachment site D5400_RS09185 PF01979 Amidohydrolase family D5400_RS09185 PF13382 Adenine deaminase C-terminal domain D5400_RS09190 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D5400_RS09190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5400_RS09195 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5400_RS09195 PF13247 4Fe-4S dicluster domain D5400_RS09195 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D5400_RS09205 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system D5400_RS09210 PF01180 Dihydroorotate dehydrogenase D5400_RS09225 PF08362 YcdC-like protein, C-terminal region D5400_RS09225 PF00440 Bacterial regulatory proteins, tetR family D5400_RS09230 PF00202 Aminotransferase class-III D5400_RS09235 PF07687 Peptidase dimerisation domain D5400_RS09235 PF01546 Peptidase family M20/M25/M40 D5400_RS09245 PF01979 Amidohydrolase family D5400_RS09250 PF00005 ABC transporter D5400_RS09255 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS09260 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS09280 PF00027 Cyclic nucleotide-binding domain D5400_RS09280 PF13545 Crp-like helix-turn-helix domain D5400_RS09290 PF04542 Sigma-70 region 2 D5400_RS09290 PF08281 Sigma-70, region 4 D5400_RS09300 PF00072 Response regulator receiver domain D5400_RS09305 PF05532 CsbD-like D5400_RS09325 PF00109 Beta-ketoacyl synthase, N-terminal domain D5400_RS09325 PF02801 Beta-ketoacyl synthase, C-terminal domain D5400_RS09325 PF16197 Ketoacyl-synthetase C-terminal extension D5400_RS09325 PF08240 Alcohol dehydrogenase GroES-like domain D5400_RS09325 PF08659 KR domain D5400_RS09325 PF14765 Polyketide synthase dehydratase D5400_RS09325 PF00550 Phosphopantetheine attachment site D5400_RS09325 PF00698 Acyl transferase domain D5400_RS09330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5400_RS09330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5400_RS09330 PF02770 Acyl-CoA dehydrogenase, middle domain D5400_RS09350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS09350 PF03459 TOBE domain D5400_RS09360 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS09365 PF03459 TOBE domain D5400_RS09365 PF00005 ABC transporter D5400_RS09370 PF00106 short chain dehydrogenase D5400_RS09375 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5400_RS09375 PF01464 Transglycosylase SLT domain D5400_RS09380 PF00768 D-alanyl-D-alanine carboxypeptidase D5400_RS09380 PF07943 Penicillin-binding protein 5, C-terminal domain D5400_RS09395 PF17151 Periplasmic sensor domain D5400_RS09395 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS09400 PF00563 EAL domain D5400_RS09400 PF01590 GAF domain D5400_RS09400 PF00360 Phytochrome region D5400_RS09400 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS09410 PF03743 Bacterial conjugation TrbI-like protein D5400_RS09425 PF04610 TrbL/VirB6 plasmid conjugal transfer protein D5400_RS09440 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D5400_RS09455 PF00437 Type II/IV secretion system protein D5400_RS09460 PF00106 short chain dehydrogenase D5400_RS09475 PF00665 Integrase core domain D5400_RS09480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D5400_RS09480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D5400_RS09480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D5400_RS09480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D5400_RS09490 PF00403 Heavy-metal-associated domain D5400_RS09510 PF01569 PAP2 superfamily D5400_RS09520 PF07732 Multicopper oxidase D5400_RS09520 PF07731 Multicopper oxidase D5400_RS09530 PF09278 MerR, DNA binding D5400_RS09530 PF00376 MerR family regulatory protein D5400_RS09540 PF04945 YHS domain D5400_RS09585 PF00873 AcrB/AcrD/AcrF family D5400_RS09665 PF07732 Multicopper oxidase D5400_RS09670 PF02742 Iron dependent repressor, metal binding and dimerisation domain D5400_RS09670 PF01325 Iron dependent repressor, N-terminal DNA binding domain D5400_RS09675 PF13411 MerR HTH family regulatory protein D5400_RS09685 PF02630 SCO1/SenC D5400_RS09705 PF01252 Signal peptidase (SPase) II D5400_RS09710 PF03734 L,D-transpeptidase catalytic domain D5400_RS09720 PF03734 L,D-transpeptidase catalytic domain D5400_RS09720 PF01476 LysM domain D5400_RS09735 PF13462 Thioredoxin D5400_RS09750 PF05425 Copper resistance protein D D5400_RS09760 PF01545 Cation efflux family D5400_RS09765 PF04191 Phospholipid methyltransferase D5400_RS09770 PF00403 Heavy-metal-associated domain D5400_RS09785 PF07690 Major Facilitator Superfamily D5400_RS09825 PF00394 Multicopper oxidase D5400_RS09825 PF07731 Multicopper oxidase D5400_RS09825 PF07732 Multicopper oxidase D5400_RS09855 PF17757 UvrB interaction domain D5400_RS09855 PF02151 UvrB/uvrC motif D5400_RS09855 PF04851 Type III restriction enzyme, res subunit D5400_RS09855 PF12344 Ultra-violet resistance protein B D5400_RS09855 PF00271 Helicase conserved C-terminal domain D5400_RS09875 PF00291 Pyridoxal-phosphate dependent enzyme D5400_RS09880 PF00291 Pyridoxal-phosphate dependent enzyme D5400_RS09880 PF00571 CBS domain D5400_RS09885 PF00288 GHMP kinases N terminal domain D5400_RS09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS09890 PF03466 LysR substrate binding domain D5400_RS09910 PF08401 Domain of unknown function (DUF1738) D5400_RS09910 PF18818 Metallopeptidase superfamily domain D5400_RS09925 PF00589 Phage integrase family D5400_RS09925 PF02899 Phage integrase, N-terminal SAM-like domain D5400_RS09935 PF01261 Xylose isomerase-like TIM barrel D5400_RS09940 PF00596 Class II Aldolase and Adducin N-terminal domain D5400_RS09945 PF07005 Sugar-binding N-terminal domain D5400_RS09945 PF17042 Nucleotide-binding C-terminal domain D5400_RS09950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5400_RS09950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D5400_RS09955 PF01370 NAD dependent epimerase/dehydratase family D5400_RS09965 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D5400_RS09965 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS09975 PF03480 Bacterial extracellular solute-binding protein, family 7 D5400_RS09980 PF00392 Bacterial regulatory proteins, gntR family D5400_RS09980 PF07729 FCD domain D5400_RS09985 PF00171 Aldehyde dehydrogenase family D5400_RS09990 PF00392 Bacterial regulatory proteins, gntR family D5400_RS09990 PF07729 FCD domain D5400_RS09995 PF10727 Rossmann-like domain D5400_RS09995 PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term D5400_RS10000 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain D5400_RS10000 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain D5400_RS10005 PF07005 Sugar-binding N-terminal domain D5400_RS10005 PF17042 Nucleotide-binding C-terminal domain D5400_RS10015 PF00361 Proton-conducting membrane transporter D5400_RS10015 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D5400_RS10015 PF13244 Domain of unknown function (DUF4040) D5400_RS10015 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D5400_RS10020 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D5400_RS10025 PF00361 Proton-conducting membrane transporter D5400_RS10030 PF01899 Na+/H+ ion antiporter subunit D5400_RS10035 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D5400_RS10040 PF03334 Na+/H+ antiporter subunit D5400_RS10050 PF00732 GMC oxidoreductase D5400_RS10050 PF05199 GMC oxidoreductase D5400_RS10060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5400_RS10070 PF02659 Putative manganese efflux pump D5400_RS10075 PF00459 Inositol monophosphatase family D5400_RS10080 PF00009 Elongation factor Tu GTP binding domain D5400_RS10090 PF03480 Bacterial extracellular solute-binding protein, family 7 D5400_RS10100 PF12849 PBP superfamily domain D5400_RS10105 PF00005 ABC transporter D5400_RS10110 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS10120 PF01266 FAD dependent oxidoreductase D5400_RS10125 PF00701 Dihydrodipicolinate synthetase family D5400_RS10130 PF02653 Branched-chain amino acid transport system / permease component D5400_RS10135 PF02653 Branched-chain amino acid transport system / permease component D5400_RS10135 PF11862 Domain of unknown function (DUF3382) D5400_RS10140 PF00005 ABC transporter D5400_RS10140 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5400_RS10145 PF00005 ABC transporter D5400_RS10155 PF13458 Periplasmic binding protein D5400_RS10175 PF00550 Phosphopantetheine attachment site D5400_RS10180 PF00118 TCP-1/cpn60 chaperonin family D5400_RS10185 PF00166 Chaperonin 10 Kd subunit D5400_RS10190 PF06233 Usg-like family D5400_RS10195 PF00571 CBS domain D5400_RS10195 PF01595 Cyclin M transmembrane N-terminal domain D5400_RS10195 PF03471 Transporter associated domain D5400_RS10200 PF01554 MatE D5400_RS10205 PF01774 UreD urease accessory protein D5400_RS10210 PF00547 Urease, gamma subunit D5400_RS10215 PF00699 Urease beta subunit D5400_RS10225 PF00449 Urease alpha-subunit, N-terminal domain D5400_RS10225 PF01979 Amidohydrolase family D5400_RS10240 PF05194 UreE urease accessory protein, C-terminal domain D5400_RS10240 PF02814 UreE urease accessory protein, N-terminal domain D5400_RS10245 PF01730 UreF D5400_RS10250 PF02492 CobW/HypB/UreG, nucleotide-binding domain D5400_RS10270 PF14403 Circularly permuted ATP-grasp type 2 D5400_RS10280 PF00270 DEAD/DEAH box helicase D5400_RS10280 PF00271 Helicase conserved C-terminal domain D5400_RS10285 PF13458 Periplasmic binding protein D5400_RS10290 PF03707 Bacterial signalling protein N terminal repeat D5400_RS10290 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS10290 PF00563 EAL domain D5400_RS10300 PF02653 Branched-chain amino acid transport system / permease component D5400_RS10305 PF00005 ABC transporter D5400_RS10310 PF00005 ABC transporter D5400_RS10310 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5400_RS10315 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D5400_RS10320 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS10325 PF00005 ABC transporter D5400_RS10325 PF00571 CBS domain D5400_RS10330 PF00672 HAMP domain D5400_RS10330 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5400_RS10330 PF00072 Response regulator receiver domain D5400_RS10330 PF01627 Hpt domain D5400_RS10330 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS10330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS10335 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D5400_RS10335 PF01266 FAD dependent oxidoreductase D5400_RS10340 PF01266 FAD dependent oxidoreductase D5400_RS10355 PF03561 Allantoicase repeat D5400_RS10360 PF04115 Ureidoglycolate lyase D5400_RS10365 PF00576 HIUase/Transthyretin family D5400_RS10370 PF01979 Amidohydrolase family D5400_RS10380 PF03466 LysR substrate binding domain D5400_RS10380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS10395 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D5400_RS10395 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5400_RS10400 PF01799 [2Fe-2S] binding domain D5400_RS10400 PF00111 2Fe-2S iron-sulfur cluster binding domain D5400_RS10415 PF00158 Sigma-54 interaction domain D5400_RS10415 PF13188 PAS domain D5400_RS10415 PF02954 Bacterial regulatory protein, Fis family D5400_RS10420 PF02653 Branched-chain amino acid transport system / permease component D5400_RS10430 PF00005 ABC transporter D5400_RS10430 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5400_RS10435 PF00005 ABC transporter D5400_RS10440 PF00080 Copper/zinc superoxide dismutase (SODC) D5400_RS10455 PF04209 homogentisate 1,2-dioxygenase D5400_RS10460 PF12706 Beta-lactamase superfamily domain D5400_RS10485 PF01494 FAD binding domain D5400_RS10495 PF00248 Aldo/keto reductase family D5400_RS10500 PF04955 HupE / UreJ protein D5400_RS10505 PF01297 Zinc-uptake complex component A periplasmic D5400_RS10510 PF00005 ABC transporter D5400_RS10515 PF00950 ABC 3 transport family D5400_RS10520 PF01475 Ferric uptake regulator family D5400_RS10525 PF00871 Acetokinase family D5400_RS10530 PF01207 Dihydrouridine synthase (Dus) D5400_RS10540 PF00313 'Cold-shock' DNA-binding domain D5400_RS10555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS10555 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS10555 PF00989 PAS fold D5400_RS10560 PF02798 Glutathione S-transferase, N-terminal domain D5400_RS10560 PF00043 Glutathione S-transferase, C-terminal domain D5400_RS10565 PF03167 Uracil DNA glycosylase superfamily D5400_RS10570 PF01037 Lrp/AsnC ligand binding domain D5400_RS10570 PF13404 AsnC-type helix-turn-helix domain D5400_RS10580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5400_RS10580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D5400_RS10585 PF01804 Penicillin amidase D5400_RS10590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS10590 PF13426 PAS domain D5400_RS10590 PF00072 Response regulator receiver domain D5400_RS10595 PF00072 Response regulator receiver domain D5400_RS10600 PF13426 PAS domain D5400_RS10600 PF13581 Histidine kinase-like ATPase domain D5400_RS10600 PF07536 HWE histidine kinase D5400_RS10605 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS10610 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS10615 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5400_RS10620 PF00994 Probable molybdopterin binding domain D5400_RS10620 PF03454 MoeA C-terminal region (domain IV) D5400_RS10620 PF03453 MoeA N-terminal region (domain I and II) D5400_RS10630 PF12804 MobA-like NTP transferase domain D5400_RS10635 PF02634 FdhD/NarQ family D5400_RS10640 PF07690 Major Facilitator Superfamily D5400_RS10670 PF17757 UvrB interaction domain D5400_RS10670 PF00271 Helicase conserved C-terminal domain D5400_RS10670 PF04851 Type III restriction enzyme, res subunit D5400_RS10670 PF12344 Ultra-violet resistance protein B D5400_RS10670 PF02151 UvrB/uvrC motif D5400_RS10685 PF07536 HWE histidine kinase D5400_RS10685 PF08447 PAS fold D5400_RS10685 PF13426 PAS domain D5400_RS10690 PF06745 KaiC D5400_RS10695 PF08447 PAS fold D5400_RS10695 PF13426 PAS domain D5400_RS10695 PF07536 HWE histidine kinase D5400_RS10700 PF03061 Thioesterase superfamily D5400_RS10710 PF00360 Phytochrome region D5400_RS10710 PF01590 GAF domain D5400_RS10710 PF00563 EAL domain D5400_RS10710 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS10715 PF02583 Metal-sensitive transcriptional repressor D5400_RS10720 PF01545 Cation efflux family D5400_RS10725 PF01740 STAS domain D5400_RS10725 PF00916 Sulfate permease family D5400_RS10730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5400_RS10730 PF13426 PAS domain D5400_RS10730 PF08447 PAS fold D5400_RS10740 PF18029 Glyoxalase-like domain D5400_RS10745 PF07237 Protein of unknown function (DUF1428) D5400_RS10755 PF00313 'Cold-shock' DNA-binding domain D5400_RS10765 PF08281 Sigma-70, region 4 D5400_RS10765 PF04542 Sigma-70 region 2 D5400_RS10770 PF03795 YCII-related domain D5400_RS10780 PF05721 Phytanoyl-CoA dioxygenase (PhyH) D5400_RS10785 PF01925 Sulfite exporter TauE/SafE D5400_RS10800 PF02654 Cobalamin-5-phosphate synthase D5400_RS10805 PF02277 Phosphoribosyltransferase D5400_RS10815 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D5400_RS10820 PF01219 Prokaryotic diacylglycerol kinase D5400_RS10830 PF00795 Carbon-nitrogen hydrolase D5400_RS10830 PF02540 NAD synthase D5400_RS10840 PF01061 ABC-2 type transporter D5400_RS10845 PF00005 ABC transporter D5400_RS10850 PF01165 Ribosomal protein S21 D5400_RS10855 PF00749 tRNA synthetases class I (E and Q), catalytic domain D5400_RS10865 PF00390 Malic enzyme, N-terminal domain D5400_RS10865 PF03949 Malic enzyme, NAD binding domain D5400_RS10865 PF01515 Phosphate acetyl/butaryl transferase D5400_RS10870 PF00149 Calcineurin-like phosphoesterase D5400_RS10880 PF12832 MFS_1 like family D5400_RS10885 PF02405 Permease MlaE D5400_RS10890 PF00005 ABC transporter D5400_RS10900 PF02470 MlaD protein D5400_RS10900 PF03886 ABC-type transport auxiliary lipoprotein component D5400_RS10915 PF00111 2Fe-2S iron-sulfur cluster binding domain D5400_RS10920 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5400_RS10930 PF00809 Pterin binding enzyme D5400_RS10940 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D5400_RS10950 PF05128 Domain of unknown function (DUF697) D5400_RS10955 PF04317 YcjX-like family, DUF463 D5400_RS10965 PF01258 Prokaryotic dksA/traR C4-type zinc finger D5400_RS10970 PF00561 alpha/beta hydrolase fold D5400_RS10980 PF00072 Response regulator receiver domain D5400_RS10980 PF13188 PAS domain D5400_RS10980 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS10980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS10980 PF08448 PAS fold D5400_RS10990 PF00691 OmpA family D5400_RS10990 PF13488 Glycine zipper D5400_RS11000 PF04227 Indigoidine synthase A like protein D5400_RS11010 PF00154 recA bacterial DNA recombination protein D5400_RS11015 PF01411 tRNA synthetases class II (A) D5400_RS11015 PF02272 DHHA1 domain D5400_RS11015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D5400_RS11025 PF04960 Glutaminase D5400_RS11035 PF00211 Adenylate and Guanylate cyclase catalytic domain D5400_RS11040 PF00180 Isocitrate/isopropylmalate dehydrogenase D5400_RS11045 PF00588 SpoU rRNA Methylase family D5400_RS11050 PF01177 Asp/Glu/Hydantoin racemase D5400_RS11055 PF01679 Proteolipid membrane potential modulator D5400_RS11060 PF01479 S4 domain D5400_RS11060 PF00163 Ribosomal protein S4/S9 N-terminal domain D5400_RS11070 PF01171 PP-loop family D5400_RS11075 PF07690 Major Facilitator Superfamily D5400_RS11080 PF07690 Major Facilitator Superfamily D5400_RS11085 PF00462 Glutaredoxin D5400_RS11095 PF02769 AIR synthase related protein, C-terminal domain D5400_RS11095 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D5400_RS11095 PF00586 AIR synthase related protein, N-terminal domain D5400_RS11110 PF03301 Tryptophan 2,3-dioxygenase D5400_RS11120 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase D5400_RS11125 PF01259 SAICAR synthetase D5400_RS11135 PF03328 HpcH/HpaI aldolase/citrate lyase family D5400_RS11150 PF00206 Lyase D5400_RS11150 PF10397 Adenylosuccinate lyase C-terminus D5400_RS11155 PF00834 Ribulose-phosphate 3 epimerase family D5400_RS11160 PF03576 Peptidase family S58 D5400_RS11170 PF01613 Flavin reductase like domain D5400_RS11175 PF05362 Lon protease (S16) C-terminal proteolytic domain D5400_RS11175 PF02190 ATP-dependent protease La (LON) substrate-binding domain D5400_RS11175 PF00004 ATPase family associated with various cellular activities (AAA) D5400_RS11190 PF13478 XdhC Rossmann domain D5400_RS11190 PF02625 XdhC and CoxI family D5400_RS11210 PF14579 Helix-hairpin-helix motif D5400_RS11210 PF07733 Bacterial DNA polymerase III alpha NTPase domain D5400_RS11210 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D5400_RS11210 PF02811 PHP domain D5400_RS11220 PF17820 PDZ domain D5400_RS11220 PF13180 PDZ domain D5400_RS11225 PF00004 ATPase family associated with various cellular activities (AAA) D5400_RS11225 PF16193 AAA C-terminal domain D5400_RS11225 PF12002 MgsA AAA+ ATPase C terminal D5400_RS11240 PF08446 PAS fold D5400_RS11240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS11240 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS11240 PF01590 GAF domain D5400_RS11240 PF00360 Phytochrome region D5400_RS11245 PF00072 Response regulator receiver domain D5400_RS11250 PF13426 PAS domain D5400_RS11250 PF08447 PAS fold D5400_RS11250 PF07536 HWE histidine kinase D5400_RS11260 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D5400_RS11265 PF00849 RNA pseudouridylate synthase D5400_RS11265 PF01479 S4 domain D5400_RS11275 PF01039 Carboxyl transferase domain D5400_RS11300 PF00756 Putative esterase D5400_RS11305 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D5400_RS11310 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D5400_RS11320 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5400_RS11320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5400_RS11335 PF01474 Class-II DAHP synthetase family D5400_RS11355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5400_RS11370 PF03547 Membrane transport protein D5400_RS11375 PF01494 FAD binding domain D5400_RS11385 PF08240 Alcohol dehydrogenase GroES-like domain D5400_RS11385 PF00107 Zinc-binding dehydrogenase D5400_RS11390 PF00005 ABC transporter D5400_RS11395 PF02653 Branched-chain amino acid transport system / permease component D5400_RS11400 PF02653 Branched-chain amino acid transport system / permease component D5400_RS11405 PF02608 ABC transporter substrate-binding protein PnrA-like D5400_RS11410 PF00873 AcrB/AcrD/AcrF family D5400_RS11425 PF01734 Patatin-like phospholipase D5400_RS11430 PF01502 Phosphoribosyl-AMP cyclohydrolase D5400_RS11435 PF01227 GTP cyclohydrolase I D5400_RS11445 PF01809 Putative membrane protein insertion efficiency factor D5400_RS11450 PF03129 Anticodon binding domain D5400_RS11450 PF02824 TGS domain D5400_RS11450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D5400_RS11450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D5400_RS11465 PF01613 Flavin reductase like domain D5400_RS11470 PF03328 HpcH/HpaI aldolase/citrate lyase family D5400_RS11480 PF01751 Toprim domain D5400_RS11480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS11480 PF00986 DNA gyrase B subunit, carboxyl terminus D5400_RS11480 PF00204 DNA gyrase B D5400_RS11585 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) D5400_RS11715 PF00893 Small Multidrug Resistance protein D5400_RS11720 PF00579 tRNA synthetases class I (W and Y) D5400_RS11725 PF03702 Anhydro-N-acetylmuramic acid kinase D5400_RS11735 PF02129 X-Pro dipeptidyl-peptidase (S15 family) D5400_RS11740 PF00266 Aminotransferase class-V D5400_RS11745 PF01458 Uncharacterized protein family (UPF0051) D5400_RS11750 PF00005 ABC transporter D5400_RS11755 PF01458 Uncharacterized protein family (UPF0051) D5400_RS11760 PF00266 Aminotransferase class-V D5400_RS11765 PF01883 Iron-sulfur cluster assembly protein D5400_RS11770 PF01521 Iron-sulphur cluster biosynthesis D5400_RS11780 PF03480 Bacterial extracellular solute-binding protein, family 7 D5400_RS11785 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS11800 PF00270 DEAD/DEAH box helicase D5400_RS11800 PF00271 Helicase conserved C-terminal domain D5400_RS11805 PF01551 Peptidase family M23 D5400_RS11805 PF08525 Opacity-associated protein A N-terminal motif D5400_RS11805 PF01476 LysM domain D5400_RS11810 PF04305 Protein of unknown function (DUF455) D5400_RS11815 PF00578 AhpC/TSA family D5400_RS11825 PF00588 SpoU rRNA Methylase family D5400_RS11825 PF08032 RNA 2'-O ribose methyltransferase substrate binding D5400_RS11855 PF00005 ABC transporter D5400_RS11870 PF02525 Flavodoxin-like fold D5400_RS11885 PF00011 Hsp20/alpha crystallin family D5400_RS11915 PF00595 PDZ domain D5400_RS11920 PF00571 CBS domain D5400_RS11925 PF13545 Crp-like helix-turn-helix domain D5400_RS11925 PF00027 Cyclic nucleotide-binding domain D5400_RS11935 PF00392 Bacterial regulatory proteins, gntR family D5400_RS11935 PF07702 UTRA domain D5400_RS11940 PF13458 Periplasmic binding protein D5400_RS11945 PF02653 Branched-chain amino acid transport system / permease component D5400_RS11950 PF11862 Domain of unknown function (DUF3382) D5400_RS11950 PF02653 Branched-chain amino acid transport system / permease component D5400_RS11955 PF00005 ABC transporter D5400_RS11955 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5400_RS11960 PF00005 ABC transporter D5400_RS11965 PF00330 Aconitase family (aconitate hydratase) D5400_RS11970 PF00694 Aconitase C-terminal domain D5400_RS11985 PF05378 Hydantoinase/oxoprolinase N-terminal region D5400_RS11985 PF01968 Hydantoinase/oxoprolinase D5400_RS11990 PF00857 Isochorismatase family D5400_RS11995 PF00890 FAD binding domain D5400_RS11995 PF14537 Cytochrome c3 D5400_RS12005 PF03144 Elongation factor Tu domain 2 D5400_RS12005 PF00009 Elongation factor Tu GTP binding domain D5400_RS12005 PF03143 Elongation factor Tu C-terminal domain D5400_RS12015 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D5400_RS12020 PF00467 KOW motif D5400_RS12020 PF02357 Transcription termination factor nusG D5400_RS12025 PF00298 Ribosomal protein L11, RNA binding domain D5400_RS12025 PF03946 Ribosomal protein L11, N-terminal domain D5400_RS12030 PF00687 Ribosomal protein L1p/L10e family D5400_RS12035 PF00466 Ribosomal protein L10 D5400_RS12040 PF00542 Ribosomal protein L7/L12 C-terminal domain D5400_RS12040 PF16320 Ribosomal protein L7/L12 dimerisation domain D5400_RS12045 PF04561 RNA polymerase Rpb2, domain 2 D5400_RS12045 PF04565 RNA polymerase Rpb2, domain 3 D5400_RS12045 PF04560 RNA polymerase Rpb2, domain 7 D5400_RS12045 PF00562 RNA polymerase Rpb2, domain 6 D5400_RS12045 PF10385 RNA polymerase beta subunit external 1 domain D5400_RS12045 PF04563 RNA polymerase beta subunit D5400_RS12050 PF04998 RNA polymerase Rpb1, domain 5 D5400_RS12050 PF05000 RNA polymerase Rpb1, domain 4 D5400_RS12050 PF00623 RNA polymerase Rpb1, domain 2 D5400_RS12050 PF04997 RNA polymerase Rpb1, domain 1 D5400_RS12050 PF04983 RNA polymerase Rpb1, domain 3 D5400_RS12060 PF00164 Ribosomal protein S12/S23 D5400_RS12065 PF00177 Ribosomal protein S7p/S5e D5400_RS12070 PF14492 Elongation Factor G, domain II D5400_RS12070 PF00679 Elongation factor G C-terminus D5400_RS12070 PF03144 Elongation factor Tu domain 2 D5400_RS12070 PF03764 Elongation factor G, domain IV D5400_RS12070 PF00009 Elongation factor Tu GTP binding domain D5400_RS12075 PF00009 Elongation factor Tu GTP binding domain D5400_RS12075 PF03144 Elongation factor Tu domain 2 D5400_RS12075 PF03143 Elongation factor Tu C-terminal domain D5400_RS12080 PF00338 Ribosomal protein S10p/S20e D5400_RS12085 PF00297 Ribosomal protein L3 D5400_RS12090 PF00573 Ribosomal protein L4/L1 family D5400_RS12095 PF00276 Ribosomal protein L23 D5400_RS12100 PF00181 Ribosomal Proteins L2, RNA binding domain D5400_RS12100 PF03947 Ribosomal Proteins L2, C-terminal domain D5400_RS12105 PF00203 Ribosomal protein S19 D5400_RS12110 PF00237 Ribosomal protein L22p/L17e D5400_RS12115 PF07650 KH domain D5400_RS12115 PF00189 Ribosomal protein S3, C-terminal domain D5400_RS12120 PF00252 Ribosomal protein L16p/L10e D5400_RS12125 PF00831 Ribosomal L29 protein D5400_RS12130 PF00366 Ribosomal protein S17 D5400_RS12135 PF00238 Ribosomal protein L14p/L23e D5400_RS12140 PF00467 KOW motif D5400_RS12140 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D5400_RS12145 PF00673 ribosomal L5P family C-terminus D5400_RS12145 PF00281 Ribosomal protein L5 D5400_RS12150 PF00253 Ribosomal protein S14p/S29e D5400_RS12155 PF00410 Ribosomal protein S8 D5400_RS12160 PF00347 Ribosomal protein L6 D5400_RS12165 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D5400_RS12170 PF00333 Ribosomal protein S5, N-terminal domain D5400_RS12170 PF03719 Ribosomal protein S5, C-terminal domain D5400_RS12175 PF00327 Ribosomal protein L30p/L7e D5400_RS12180 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D5400_RS12185 PF00344 SecY translocase D5400_RS12190 PF05191 Adenylate kinase, active site lid D5400_RS12195 PF00416 Ribosomal protein S13/S18 D5400_RS12200 PF00411 Ribosomal protein S11 D5400_RS12205 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D5400_RS12205 PF01000 RNA polymerase Rpb3/RpoA insert domain D5400_RS12205 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D5400_RS12210 PF01196 Ribosomal protein L17 D5400_RS12220 PF13823 Alcohol dehydrogenase GroES-associated D5400_RS12220 PF00107 Zinc-binding dehydrogenase D5400_RS12220 PF08240 Alcohol dehydrogenase GroES-like domain D5400_RS12230 PF08471 Class II vitamin B12-dependent ribonucleotide reductase D5400_RS12230 PF02867 Ribonucleotide reductase, barrel domain D5400_RS12240 PF01384 Phosphate transporter family D5400_RS12255 PF06719 AraC-type transcriptional regulator N-terminus D5400_RS12255 PF12833 Helix-turn-helix domain D5400_RS12260 PF00156 Phosphoribosyl transferase domain D5400_RS12265 PF02464 Competence-damaged protein D5400_RS12265 PF00994 Probable molybdopterin binding domain D5400_RS12270 PF03358 NADPH-dependent FMN reductase D5400_RS12295 PF04055 Radical SAM superfamily D5400_RS12295 PF06463 Molybdenum Cofactor Synthesis C D5400_RS12305 PF17158 Membrane-associated sensor, integral membrane domain D5400_RS12305 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS12310 PF05683 Fumarase C-terminus D5400_RS12310 PF05681 Fumarate hydratase (Fumerase) D5400_RS12315 PF01471 Putative peptidoglycan binding domain D5400_RS12315 PF03734 L,D-transpeptidase catalytic domain D5400_RS12320 PF13419 Haloacid dehalogenase-like hydrolase D5400_RS12325 PF08240 Alcohol dehydrogenase GroES-like domain D5400_RS12325 PF00107 Zinc-binding dehydrogenase D5400_RS12340 PF00289 Biotin carboxylase, N-terminal domain D5400_RS12340 PF00364 Biotin-requiring enzyme D5400_RS12340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D5400_RS12340 PF18140 Propionyl-coenzyme A carboxylase BT domain D5400_RS12340 PF02785 Biotin carboxylase C-terminal domain D5400_RS12345 PF03099 Biotin/lipoate A/B protein ligase family D5400_RS12445 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) D5400_RS12460 PF00145 C-5 cytosine-specific DNA methylase D5400_RS12500 PF01343 Peptidase family S49 D5400_RS12645 PF03448 MgtE intracellular N domain D5400_RS12645 PF00571 CBS domain D5400_RS12645 PF01769 Divalent cation transporter D5400_RS12650 PF00376 MerR family regulatory protein D5400_RS12650 PF09278 MerR, DNA binding D5400_RS12660 PF00248 Aldo/keto reductase family D5400_RS12670 PF03313 Serine dehydratase alpha chain D5400_RS12670 PF03315 Serine dehydratase beta chain D5400_RS12685 PF00226 DnaJ domain D5400_RS12685 PF00684 DnaJ central domain D5400_RS12685 PF01556 DnaJ C terminal domain D5400_RS12700 PF02617 ATP-dependent Clp protease adaptor protein ClpS D5400_RS12705 PF10431 C-terminal, D2-small domain, of ClpB protein D5400_RS12705 PF02861 Clp amino terminal domain, pathogenicity island component D5400_RS12705 PF17871 AAA lid domain D5400_RS12705 PF07724 AAA domain (Cdc48 subfamily) D5400_RS12705 PF00004 ATPase family associated with various cellular activities (AAA) D5400_RS12720 PF02542 YgbB family D5400_RS12720 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D5400_RS12725 PF01207 Dihydrouridine synthase (Dus) D5400_RS12730 PF00989 PAS fold D5400_RS12730 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS12730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS12735 PF00158 Sigma-54 interaction domain D5400_RS12735 PF02954 Bacterial regulatory protein, Fis family D5400_RS12735 PF00072 Response regulator receiver domain D5400_RS12740 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS12740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS12740 PF00672 HAMP domain D5400_RS12740 PF00989 PAS fold D5400_RS12745 PF02954 Bacterial regulatory protein, Fis family D5400_RS12745 PF00072 Response regulator receiver domain D5400_RS12745 PF00158 Sigma-54 interaction domain D5400_RS12760 PF03171 2OG-Fe(II) oxygenase superfamily D5400_RS12760 PF14226 non-haem dioxygenase in morphine synthesis N-terminal D5400_RS12775 PF00005 ABC transporter D5400_RS12775 PF08402 TOBE domain D5400_RS12780 PF00491 Arginase family D5400_RS12795 PF03795 YCII-related domain D5400_RS12815 PF03330 Lytic transglycolase D5400_RS12815 PF05036 Sporulation related domain D5400_RS12820 PF00768 D-alanyl-D-alanine carboxypeptidase D5400_RS12820 PF07943 Penicillin-binding protein 5, C-terminal domain D5400_RS12825 PF02223 Thymidylate kinase D5400_RS12835 PF08264 Anticodon-binding domain of tRNA D5400_RS12835 PF09334 tRNA synthetases class I (M) D5400_RS12840 PF01026 TatD related DNase D5400_RS12845 PF12706 Beta-lactamase superfamily domain D5400_RS12845 PF03099 Biotin/lipoate A/B protein ligase family D5400_RS12855 PF03819 MazG nucleotide pyrophosphohydrolase domain D5400_RS12860 PF13167 GTP-binding GTPase N-terminal D5400_RS12860 PF16360 GTP-binding GTPase Middle Region D5400_RS12860 PF01926 50S ribosome-binding GTPase D5400_RS12865 PF17209 Hfq protein D5400_RS12870 PF01063 Amino-transferase class IV D5400_RS12875 PF02386 Cation transport protein D5400_RS12880 PF02254 TrkA-N domain D5400_RS12880 PF02080 TrkA-C domain D5400_RS12885 PF13505 Outer membrane protein beta-barrel domain D5400_RS12895 PF01513 ATP-NAD kinase D5400_RS12900 PF00436 Single-strand binding protein family D5400_RS12905 PF17760 UvrA interaction domain D5400_RS12905 PF17755 UvrA DNA-binding domain D5400_RS12910 PF00043 Glutathione S-transferase, C-terminal domain D5400_RS12910 PF13417 Glutathione S-transferase, N-terminal domain D5400_RS12920 PF00543 Nitrogen regulatory protein P-II D5400_RS12925 PF00120 Glutamine synthetase, catalytic domain D5400_RS12925 PF03951 Glutamine synthetase, beta-Grasp domain D5400_RS12935 PF00270 DEAD/DEAH box helicase D5400_RS12935 PF00271 Helicase conserved C-terminal domain D5400_RS12935 PF09382 RQC domain D5400_RS12935 PF16124 RecQ zinc-binding D5400_RS12935 PF00570 HRDC domain D5400_RS12945 PF04011 LemA family D5400_RS12955 PF00924 Mechanosensitive ion channel D5400_RS12965 PF00171 Aldehyde dehydrogenase family D5400_RS12970 PF00551 Formyl transferase D5400_RS12975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5400_RS12975 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D5400_RS12985 PF02770 Acyl-CoA dehydrogenase, middle domain D5400_RS12985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5400_RS12985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5400_RS12990 PF00111 2Fe-2S iron-sulfur cluster binding domain D5400_RS13000 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D5400_RS13000 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D5400_RS13010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5400_RS13010 PF14824 Sirohaem biosynthesis protein central D5400_RS13010 PF10414 Sirohaem synthase dimerisation region D5400_RS13020 PF01702 Queuine tRNA-ribosyltransferase D5400_RS13025 PF02547 Queuosine biosynthesis protein D5400_RS13035 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D5400_RS13040 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D5400_RS13045 PF01467 Cytidylyltransferase-like D5400_RS13050 PF00521 DNA gyrase/topoisomerase IV, subunit A D5400_RS13050 PF03989 DNA gyrase C-terminal domain, beta-propeller D5400_RS13055 PF02684 Lipid-A-disaccharide synthetase D5400_RS13060 PF17930 LpxI N-terminal domain D5400_RS13060 PF06230 LpxI C-terminal domain D5400_RS13065 PF00132 Bacterial transferase hexapeptide (six repeats) D5400_RS13065 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D5400_RS13070 PF07977 FabA-like domain D5400_RS13075 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D5400_RS13075 PF00132 Bacterial transferase hexapeptide (six repeats) D5400_RS13080 PF01103 Surface antigen D5400_RS13080 PF07244 Surface antigen variable number repeat D5400_RS13085 PF02163 Peptidase family M50 D5400_RS13085 PF17820 PDZ domain D5400_RS13095 PF01255 Putative undecaprenyl diphosphate synthase D5400_RS13100 PF01765 Ribosome recycling factor D5400_RS13105 PF00696 Amino acid kinase family D5400_RS13110 PF00889 Elongation factor TS D5400_RS13115 PF00318 Ribosomal protein S2 D5400_RS13120 PF00072 Response regulator receiver domain D5400_RS13120 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS13120 PF01627 Hpt domain D5400_RS13120 PF00989 PAS fold D5400_RS13120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS13120 PF18415 Histidine kinase receptor ArcB trans-membrane domain D5400_RS13125 PF00072 Response regulator receiver domain D5400_RS13130 PF00072 Response regulator receiver domain D5400_RS13130 PF02954 Bacterial regulatory protein, Fis family D5400_RS13140 PF01292 Prokaryotic cytochrome b561 D5400_RS13145 PF00174 Oxidoreductase molybdopterin binding domain D5400_RS13170 PF00893 Small Multidrug Resistance protein D5400_RS13175 PF01230 HIT domain D5400_RS13180 PF03364 Polyketide cyclase / dehydrase and lipid transport D5400_RS13185 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D5400_RS13185 PF04055 Radical SAM superfamily D5400_RS13195 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5400_RS13195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5400_RS13205 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D5400_RS13205 PF00364 Biotin-requiring enzyme D5400_RS13205 PF02817 e3 binding domain D5400_RS13210 PF00364 Biotin-requiring enzyme D5400_RS13210 PF02780 Transketolase, C-terminal domain D5400_RS13210 PF02779 Transketolase, pyrimidine binding domain D5400_RS13215 PF00676 Dehydrogenase E1 component D5400_RS13235 PF16868 NMT1-like family D5400_RS13250 PF00486 Transcriptional regulatory protein, C terminal D5400_RS13250 PF00072 Response regulator receiver domain D5400_RS13255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS13260 PF00478 IMP dehydrogenase / GMP reductase domain D5400_RS13260 PF00571 CBS domain D5400_RS13280 PF00132 Bacterial transferase hexapeptide (six repeats) D5400_RS13295 PF00132 Bacterial transferase hexapeptide (six repeats) D5400_RS13295 PF06426 Serine acetyltransferase, N-terminal D5400_RS13300 PF12697 Alpha/beta hydrolase family D5400_RS13305 PF00364 Biotin-requiring enzyme D5400_RS13305 PF00561 alpha/beta hydrolase fold D5400_RS13315 PF01494 FAD binding domain D5400_RS13320 PF00005 ABC transporter D5400_RS13325 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS13330 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS13335 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5400_RS13340 PF01053 Cys/Met metabolism PLP-dependent enzyme D5400_RS13355 PF00113 Enolase, C-terminal TIM barrel domain D5400_RS13355 PF03952 Enolase, N-terminal domain D5400_RS13365 PF00793 DAHP synthetase I family D5400_RS13375 PF06418 CTP synthase N-terminus D5400_RS13375 PF00117 Glutamine amidotransferase class-I D5400_RS13385 PF00121 Triosephosphate isomerase D5400_RS13390 PF13145 PPIC-type PPIASE domain D5400_RS13395 PF02885 Glycosyl transferase family, helical bundle domain D5400_RS13395 PF00591 Glycosyl transferase family, a/b domain D5400_RS13400 PF00218 Indole-3-glycerol phosphate synthase D5400_RS13405 PF01967 MoaC family D5400_RS13410 PF00994 Probable molybdopterin binding domain D5400_RS13410 PF03454 MoeA C-terminal region (domain IV) D5400_RS13410 PF03453 MoeA N-terminal region (domain I and II) D5400_RS13415 PF00717 Peptidase S24-like D5400_RS13415 PF01726 LexA DNA binding domain D5400_RS13420 PF00753 Metallo-beta-lactamase superfamily D5400_RS13420 PF03772 Competence protein D5400_RS13425 PF00749 tRNA synthetases class I (E and Q), catalytic domain D5400_RS13430 PF00285 Citrate synthase, C-terminal domain D5400_RS13435 PF01914 MarC family integral membrane protein D5400_RS13455 PF17092 Penicillin-binding protein OB-like domain D5400_RS13455 PF00905 Penicillin binding protein transpeptidase domain D5400_RS13455 PF00912 Transglycosylase D5400_RS13460 PF11741 AMIN domain D5400_RS13460 PF01520 N-acetylmuramoyl-L-alanine amidase D5400_RS13465 PF12111 Polyribonucleotide phosphorylase C terminal D5400_RS13465 PF00575 S1 RNA binding domain D5400_RS13465 PF12111 Polyribonucleotide phosphorylase C terminal D5400_RS13465 PF10150 Ribonuclease E/G family D5400_RS13465 PF00575 S1 RNA binding domain D5400_RS13465 PF10150 Ribonuclease E/G family D5400_RS13470 PF00155 Aminotransferase class I and II D5400_RS13485 PF01220 Dehydroquinase class II D5400_RS13490 PF00364 Biotin-requiring enzyme D5400_RS13495 PF00289 Biotin carboxylase, N-terminal domain D5400_RS13495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D5400_RS13495 PF02785 Biotin carboxylase C-terminal domain D5400_RS13500 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D5400_RS13505 PF01389 OmpA-like transmembrane domain D5400_RS13505 PF00691 OmpA family D5400_RS13525 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D5400_RS13530 PF17746 SfsA N-terminal OB domain D5400_RS13530 PF03749 Sugar fermentation stimulation protein RE domain D5400_RS13535 PF00557 Metallopeptidase family M24 D5400_RS13540 PF04002 RadC-like JAB domain D5400_RS13545 PF04244 Deoxyribodipyrimidine photo-lyase-related protein D5400_RS13550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D5400_RS13550 PF05697 Bacterial trigger factor protein (TF) D5400_RS13550 PF05698 Bacterial trigger factor protein (TF) C-terminus D5400_RS13575 PF01134 Glucose inhibited division protein A D5400_RS13585 PF04116 Fatty acid hydroxylase superfamily D5400_RS13605 PF07549 SecD/SecF GG Motif D5400_RS13605 PF02355 Protein export membrane protein D5400_RS13610 PF02699 Preprotein translocase subunit D5400_RS13620 PF01551 Peptidase family M23 D5400_RS13620 PF01476 LysM domain D5400_RS13630 PF01975 Survival protein SurE D5400_RS13635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D5400_RS13635 PF02403 Seryl-tRNA synthetase N-terminal domain D5400_RS13640 PF00902 Sec-independent protein translocase protein (TatC) D5400_RS13645 PF02416 mttA/Hcf106 family D5400_RS13650 PF02416 mttA/Hcf106 family D5400_RS13655 PF04079 Segregation and condensation complex subunit ScpB D5400_RS13660 PF02616 Segregation and condensation protein ScpA D5400_RS13665 PF00933 Glycosyl hydrolase family 3 N terminal domain D5400_RS13675 PF00750 tRNA synthetases class I (R) D5400_RS13675 PF03485 Arginyl tRNA synthetase N terminal domain D5400_RS13675 PF05746 DALR anticodon binding domain D5400_RS13680 PF13286 Phosphohydrolase-associated domain D5400_RS13680 PF01966 HD domain D5400_RS13685 PF01521 Iron-sulphur cluster biosynthesis D5400_RS13690 PF03372 Endonuclease/Exonuclease/phosphatase family D5400_RS13700 PF08238 Sel1 repeat D5400_RS13705 PF00920 Dehydratase family D5400_RS13715 PF10458 Valyl tRNA synthetase tRNA binding arm D5400_RS13715 PF00133 tRNA synthetases class I (I, L, M and V) D5400_RS13715 PF08264 Anticodon-binding domain of tRNA D5400_RS13725 PF02321 Outer membrane efflux protein D5400_RS13740 PF03775 Septum formation inhibitor MinC, C-terminal domain D5400_RS13745 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D5400_RS13750 PF03776 Septum formation topological specificity factor MinE D5400_RS13770 PF03441 FAD binding domain of DNA photolyase D5400_RS13770 PF00875 DNA photolyase D5400_RS13795 PF00106 short chain dehydrogenase D5400_RS13800 PF12973 ChrR Cupin-like domain D5400_RS13805 PF00291 Pyridoxal-phosphate dependent enzyme D5400_RS13810 PF01411 tRNA synthetases class II (A) D5400_RS13810 PF02272 DHHA1 domain D5400_RS13810 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D5400_RS13815 PF00581 Rhodanese-like domain D5400_RS13825 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D5400_RS13825 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D5400_RS13830 PF01037 Lrp/AsnC ligand binding domain D5400_RS13835 PF05977 Transmembrane secretion effector D5400_RS13845 PF02872 5'-nucleotidase, C-terminal domain D5400_RS13845 PF00149 Calcineurin-like phosphoesterase D5400_RS13850 PF03461 TRCF domain D5400_RS13850 PF00271 Helicase conserved C-terminal domain D5400_RS13850 PF02559 CarD-like/TRCF domain D5400_RS13850 PF00270 DEAD/DEAH box helicase D5400_RS13850 PF17757 UvrB interaction domain D5400_RS13855 PF03937 Flavinator of succinate dehydrogenase D5400_RS13860 PF00270 DEAD/DEAH box helicase D5400_RS13860 PF00271 Helicase conserved C-terminal domain D5400_RS13860 PF17191 RecG wedge domain D5400_RS13870 PF02683 Cytochrome C biogenesis protein transmembrane region D5400_RS14080 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) D5400_RS14190 PF00563 EAL domain D5400_RS14190 PF00989 PAS fold D5400_RS14190 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS14190 PF01590 GAF domain D5400_RS14200 PF00313 'Cold-shock' DNA-binding domain D5400_RS14205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5400_RS14220 PF02272 DHHA1 domain D5400_RS14220 PF17768 RecJ OB domain D5400_RS14220 PF01368 DHH family D5400_RS14225 PF01842 ACT domain D5400_RS14225 PF00742 Homoserine dehydrogenase D5400_RS14225 PF03447 Homoserine dehydrogenase, NAD binding domain D5400_RS14230 PF00155 Aminotransferase class I and II D5400_RS14240 PF02637 GatB domain D5400_RS14240 PF02934 GatB/GatE catalytic domain D5400_RS14250 PF01425 Amidase D5400_RS14260 PF02686 Glu-tRNAGln amidotransferase C subunit D5400_RS14265 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS14265 PF13188 PAS domain D5400_RS14265 PF00563 EAL domain D5400_RS14265 PF03707 Bacterial signalling protein N terminal repeat D5400_RS14275 PF03652 Holliday junction resolvase D5400_RS14295 PF02770 Acyl-CoA dehydrogenase, middle domain D5400_RS14295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5400_RS14295 PF18158 Adaptive response protein AidB N-terminal domain D5400_RS14300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D5400_RS14300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D5400_RS14305 PF01979 Amidohydrolase family D5400_RS14310 PF02660 Glycerol-3-phosphate acyltransferase D5400_RS14315 PF17782 DprA winged helix domain D5400_RS14315 PF02481 DNA recombination-mediator protein A D5400_RS14325 PF13368 Topoisomerase C-terminal repeat D5400_RS14325 PF01751 Toprim domain D5400_RS14325 PF01131 DNA topoisomerase D5400_RS14325 PF01396 Topoisomerase DNA binding C4 zinc finger D5400_RS14330 PF00773 RNB domain D5400_RS14330 PF00575 S1 RNA binding domain D5400_RS14330 PF17876 Cold shock domain D5400_RS14330 PF08461 Ribonuclease R winged-helix domain D5400_RS14330 PF08206 Ribonuclease B OB domain D5400_RS14350 PF00471 Ribosomal protein L33 D5400_RS14355 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS14355 PF00072 Response regulator receiver domain D5400_RS14360 PF00072 Response regulator receiver domain D5400_RS14375 PF00817 impB/mucB/samB family D5400_RS14375 PF11799 impB/mucB/samB family C-terminal domain D5400_RS14390 PF00005 ABC transporter D5400_RS14395 PF02687 FtsX-like permease family D5400_RS14395 PF12704 MacB-like periplasmic core domain D5400_RS14400 PF03129 Anticodon binding domain D5400_RS14400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D5400_RS14415 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D5400_RS14415 PF12706 Beta-lactamase superfamily domain D5400_RS14415 PF17770 Ribonuclease J C-terminal domain D5400_RS14425 PF00361 Proton-conducting membrane transporter D5400_RS14430 PF00361 Proton-conducting membrane transporter D5400_RS14435 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D5400_RS14435 PF00361 Proton-conducting membrane transporter D5400_RS14440 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D5400_RS14445 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D5400_RS14450 PF12838 4Fe-4S dicluster domain D5400_RS14455 PF00146 NADH dehydrogenase D5400_RS14460 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D5400_RS14460 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal D5400_RS14460 PF00384 Molybdopterin oxidoreductase D5400_RS14470 PF10531 SLBB domain D5400_RS14470 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D5400_RS14470 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D5400_RS14485 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D5400_RS14490 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D5400_RS14495 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D5400_RS14500 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D5400_RS14520 PF13183 4Fe-4S dicluster domain D5400_RS14520 PF02754 Cysteine-rich domain D5400_RS14530 PF01565 FAD binding domain D5400_RS14535 PF01565 FAD binding domain D5400_RS14535 PF02913 FAD linked oxidases, C-terminal domain D5400_RS14540 PF03466 LysR substrate binding domain D5400_RS14540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS14550 PF00392 Bacterial regulatory proteins, gntR family D5400_RS14550 PF07729 FCD domain D5400_RS14555 PF02754 Cysteine-rich domain D5400_RS14560 PF13183 4Fe-4S dicluster domain D5400_RS14560 PF02589 LUD domain D5400_RS14560 PF11870 Domain of unknown function (DUF3390) D5400_RS14565 PF02589 LUD domain D5400_RS14580 PF04452 RNA methyltransferase D5400_RS14585 PF04107 Glutamate-cysteine ligase family 2(GCS2) D5400_RS14600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS14600 PF03466 LysR substrate binding domain D5400_RS14605 PF02601 Exonuclease VII, large subunit D5400_RS14605 PF13742 OB-fold nucleic acid binding domain D5400_RS14610 PF05661 Protein of unknown function (DUF808) D5400_RS14620 PF13378 Enolase C-terminal domain-like D5400_RS14620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D5400_RS14625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5400_RS14630 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS14635 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS14635 PF12911 N-terminal TM domain of oligopeptide transport permease C D5400_RS14640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5400_RS14640 PF00005 ABC transporter D5400_RS14645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5400_RS14645 PF00005 ABC transporter D5400_RS14650 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D5400_RS14655 PF01546 Peptidase family M20/M25/M40 D5400_RS14660 PF00216 Bacterial DNA-binding protein D5400_RS14665 PF00004 ATPase family associated with various cellular activities (AAA) D5400_RS14665 PF05362 Lon protease (S16) C-terminal proteolytic domain D5400_RS14665 PF02190 ATP-dependent protease La (LON) substrate-binding domain D5400_RS14670 PF10431 C-terminal, D2-small domain, of ClpB protein D5400_RS14670 PF06689 ClpX C4-type zinc finger D5400_RS14670 PF07724 AAA domain (Cdc48 subfamily) D5400_RS14675 PF00574 Clp protease D5400_RS14680 PF01266 FAD dependent oxidoreductase D5400_RS14685 PF00067 Cytochrome P450 D5400_RS14695 PF01053 Cys/Met metabolism PLP-dependent enzyme D5400_RS14700 PF13380 CoA binding domain D5400_RS14705 PF00392 Bacterial regulatory proteins, gntR family D5400_RS14705 PF07729 FCD domain D5400_RS14710 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS14715 PF00005 ABC transporter D5400_RS14720 PF09084 NMT1/THI5 like D5400_RS14725 PF01557 Fumarylacetoacetate (FAA) hydrolase family D5400_RS14730 PF03737 Aldolase/RraA D5400_RS14735 PF00378 Enoyl-CoA hydratase/isomerase D5400_RS14745 PF00572 Ribosomal protein L13 D5400_RS14750 PF00380 Ribosomal protein S9/S16 D5400_RS14755 PF00491 Arginase family D5400_RS14760 PF01118 Semialdehyde dehydrogenase, NAD binding domain D5400_RS14765 PF02628 Cytochrome oxidase assembly protein D5400_RS14795 PF02397 Bacterial sugar transferase D5400_RS14810 PF00248 Aldo/keto reductase family D5400_RS14825 PF13411 MerR HTH family regulatory protein D5400_RS14830 PF00216 Bacterial DNA-binding protein D5400_RS14835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D5400_RS14835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D5400_RS14840 PF02504 Fatty acid synthesis protein D5400_RS14860 PF03030 Inorganic H+ pyrophosphatase D5400_RS14865 PF07690 Major Facilitator Superfamily D5400_RS14870 PF01029 NusB family D5400_RS14875 PF00885 6,7-dimethyl-8-ribityllumazine synthase D5400_RS14880 PF00677 Lumazine binding domain D5400_RS14885 PF01872 RibD C-terminal domain D5400_RS14885 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D5400_RS14890 PF03477 ATP cone domain D5400_RS14895 PF00464 Serine hydroxymethyltransferase D5400_RS14900 PF12833 Helix-turn-helix domain D5400_RS14910 PF01471 Putative peptidoglycan binding domain D5400_RS14910 PF03734 L,D-transpeptidase catalytic domain D5400_RS14925 PF00490 Delta-aminolevulinic acid dehydratase D5400_RS14935 PF04377 Arginine-tRNA-protein transferase, C terminus D5400_RS14935 PF04376 Arginine-tRNA-protein transferase, N terminus D5400_RS14940 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme D5400_RS14945 PF00521 DNA gyrase/topoisomerase IV, subunit A D5400_RS14945 PF03989 DNA gyrase C-terminal domain, beta-propeller D5400_RS14955 PF01470 Pyroglutamyl peptidase D5400_RS14960 PF01336 OB-fold nucleic acid binding domain D5400_RS14960 PF00152 tRNA synthetases class II (D, K and N) D5400_RS14960 PF02938 GAD domain D5400_RS14965 PF01612 3'-5' exonuclease D5400_RS14965 PF00570 HRDC domain D5400_RS14980 PF02503 Polyphosphate kinase middle domain D5400_RS14980 PF13090 Polyphosphate kinase C-terminal domain 2 D5400_RS14980 PF17941 Polyphosphate kinase C-terminal domain 1 D5400_RS14980 PF13089 Polyphosphate kinase N-terminal domain D5400_RS14990 PF01594 AI-2E family transporter D5400_RS14995 PF01066 CDP-alcohol phosphatidyltransferase D5400_RS15000 PF00586 AIR synthase related protein, N-terminal domain D5400_RS15000 PF02769 AIR synthase related protein, C-terminal domain D5400_RS15005 PF00551 Formyl transferase D5400_RS15010 PF01568 Molydopterin dinucleotide binding domain D5400_RS15010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D5400_RS15010 PF00384 Molybdopterin oxidoreductase D5400_RS15015 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D5400_RS15025 PF00445 Ribonuclease T2 family D5400_RS15030 PF13417 Glutathione S-transferase, N-terminal domain D5400_RS15030 PF00043 Glutathione S-transferase, C-terminal domain D5400_RS15035 PF13505 Outer membrane protein beta-barrel domain D5400_RS15045 PF02151 UvrB/uvrC motif D5400_RS15045 PF12826 Helix-hairpin-helix motif D5400_RS15045 PF08459 UvrC Helix-hairpin-helix N-terminal D5400_RS15045 PF01541 GIY-YIG catalytic domain D5400_RS15055 PF01066 CDP-alcohol phosphatidyltransferase D5400_RS15065 PF02391 MoaE protein D5400_RS15070 PF01507 Phosphoadenosine phosphosulfate reductase family D5400_RS15075 PF00334 Nucleoside diphosphate kinase D5400_RS15085 PF12848 ABC transporter D5400_RS15085 PF00005 ABC transporter D5400_RS15095 PF01544 CorA-like Mg2+ transporter protein D5400_RS15105 PF02789 Cytosol aminopeptidase family, N-terminal domain D5400_RS15105 PF00883 Cytosol aminopeptidase family, catalytic domain D5400_RS15120 PF03968 OstA-like protein D5400_RS15120 PF04453 LPS transport system D D5400_RS15130 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D5400_RS15135 PF00398 Ribosomal RNA adenine dimethylase D5400_RS15140 PF00625 Guanylate kinase D5400_RS15145 PF03755 YicC-like family, N-terminal region D5400_RS15145 PF08340 Domain of unknown function (DUF1732) D5400_RS15150 PF02618 YceG-like family D5400_RS15155 PF00109 Beta-ketoacyl synthase, N-terminal domain D5400_RS15155 PF02801 Beta-ketoacyl synthase, C-terminal domain D5400_RS15160 PF00550 Phosphopantetheine attachment site D5400_RS15170 PF00698 Acyl transferase domain D5400_RS15175 PF01250 Ribosomal protein S6 D5400_RS15180 PF01084 Ribosomal protein S18 D5400_RS15190 PF01281 Ribosomal protein L9, N-terminal domain D5400_RS15190 PF03948 Ribosomal protein L9, C-terminal domain D5400_RS15200 PF00772 DnaB-like helicase N terminal domain D5400_RS15200 PF03796 DnaB-like helicase C terminal domain D5400_RS15205 PF00842 Alanine racemase, C-terminal domain D5400_RS15205 PF01168 Alanine racemase, N-terminal domain D5400_RS15220 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH D5400_RS15225 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D5400_RS15235 PF18073 Rubredoxin metal binding domain D5400_RS15235 PF06745 KaiC D5400_RS15245 PF13537 Glutamine amidotransferase domain D5400_RS15245 PF00156 Phosphoribosyl transferase domain D5400_RS15250 PF00106 short chain dehydrogenase D5400_RS15255 PF01066 CDP-alcohol phosphatidyltransferase D5400_RS15260 PF02666 Phosphatidylserine decarboxylase D5400_RS15265 PF00005 ABC transporter D5400_RS15265 PF00664 ABC transporter transmembrane region D5400_RS15280 PF03641 Possible lysine decarboxylase D5400_RS15285 PF00795 Carbon-nitrogen hydrolase D5400_RS15285 PF00583 Acetyltransferase (GNAT) family D5400_RS15295 PF00892 EamA-like transporter family D5400_RS15300 PF00682 HMGL-like D5400_RS15300 PF08502 LeuA allosteric (dimerisation) domain D5400_RS15310 PF00561 alpha/beta hydrolase fold D5400_RS15320 PF01406 tRNA synthetases class I (C) catalytic domain D5400_RS15330 PF01810 LysE type translocator D5400_RS15345 PF00293 NUDIX domain D5400_RS15360 PF01571 Aminomethyltransferase folate-binding domain D5400_RS15365 PF01966 HD domain D5400_RS15385 PF08281 Sigma-70, region 4 D5400_RS15385 PF04542 Sigma-70 region 2 D5400_RS15395 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D5400_RS15395 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D5400_RS15400 PF00890 FAD binding domain D5400_RS15400 PF02910 Fumarate reductase flavoprotein C-term D5400_RS15405 PF01510 N-acetylmuramoyl-L-alanine amidase D5400_RS15405 PF01476 LysM domain D5400_RS15405 PF01471 Putative peptidoglycan binding domain D5400_RS15410 PF02445 Quinolinate synthetase A protein D5400_RS15430 PF02565 Recombination protein O C terminal D5400_RS15430 PF11967 Recombination protein O N terminal D5400_RS15435 PF01926 50S ribosome-binding GTPase D5400_RS15435 PF07650 KH domain D5400_RS15440 PF14622 Ribonuclease-III-like D5400_RS15440 PF00035 Double-stranded RNA binding motif D5400_RS15445 PF10502 Signal peptidase, peptidase S26 D5400_RS15450 PF01648 4'-phosphopantetheinyl transferase superfamily D5400_RS15460 PF02824 TGS domain D5400_RS15460 PF13291 ACT domain D5400_RS15460 PF04607 Region found in RelA / SpoT proteins D5400_RS15465 PF01192 RNA polymerase Rpb6 D5400_RS15475 PF03167 Uracil DNA glycosylase superfamily D5400_RS15490 PF01668 SmpB protein D5400_RS15495 PF00701 Dihydrodipicolinate synthetase family D5400_RS15500 PF14718 Soluble lytic murein transglycosylase L domain D5400_RS15500 PF01464 Transglycosylase SLT domain D5400_RS15510 PF02530 Porin subfamily D5400_RS15515 PF01380 SIS domain D5400_RS15520 PF00132 Bacterial transferase hexapeptide (six repeats) D5400_RS15520 PF12804 MobA-like NTP transferase domain D5400_RS15525 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D5400_RS15545 PF01618 MotA/TolQ/ExbB proton channel family D5400_RS15565 PF00664 ABC transporter transmembrane region D5400_RS15565 PF00005 ABC transporter D5400_RS15570 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS15570 PF02743 Cache domain D5400_RS15570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS15575 PF02954 Bacterial regulatory protein, Fis family D5400_RS15575 PF00158 Sigma-54 interaction domain D5400_RS15575 PF00072 Response regulator receiver domain D5400_RS15580 PF03401 Tripartite tricarboxylate transporter family receptor D5400_RS15585 PF07331 Tripartite tricarboxylate transporter TctB family D5400_RS15590 PF01970 Tripartite tricarboxylate transporter TctA family D5400_RS15600 PF00155 Aminotransferase class I and II D5400_RS15605 PF08990 Erythronolide synthase docking D5400_RS15605 PF00698 Acyl transferase domain D5400_RS15605 PF14765 Polyketide synthase dehydratase D5400_RS15605 PF09277 Erythronolide synthase, docking D5400_RS15605 PF00109 Beta-ketoacyl synthase, N-terminal domain D5400_RS15605 PF02801 Beta-ketoacyl synthase, C-terminal domain D5400_RS15605 PF08659 KR domain D5400_RS15605 PF00550 Phosphopantetheine attachment site D5400_RS15605 PF16197 Ketoacyl-synthetase C-terminal extension D5400_RS15605 PF08240 Alcohol dehydrogenase GroES-like domain D5400_RS15610 PF00483 Nucleotidyl transferase D5400_RS15615 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D5400_RS15620 PF16363 GDP-mannose 4,6 dehydratase D5400_RS15625 PF04321 RmlD substrate binding domain D5400_RS15650 PF00005 ABC transporter D5400_RS15665 PF00535 Glycosyl transferase family 2 D5400_RS15675 PF00106 short chain dehydrogenase D5400_RS15685 PF05159 Capsule polysaccharide biosynthesis protein D5400_RS15705 PF01555 DNA methylase D5400_RS15765 PF04851 Type III restriction enzyme, res subunit D5400_RS15765 PF00271 Helicase conserved C-terminal domain D5400_RS15800 PF02195 ParB-like nuclease domain D5400_RS15930 PF00916 Sulfate permease family D5400_RS15930 PF01740 STAS domain D5400_RS15940 PF04143 Sulphur transport D5400_RS15950 PF00753 Metallo-beta-lactamase superfamily D5400_RS15950 PF04273 Putative phosphatase (DUF442) D5400_RS15955 PF00753 Metallo-beta-lactamase superfamily D5400_RS15955 PF04273 Putative phosphatase (DUF442) D5400_RS15965 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS15965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS15965 PF08521 Two-component sensor kinase N-terminal D5400_RS15970 PF00486 Transcriptional regulatory protein, C terminal D5400_RS15970 PF00072 Response regulator receiver domain D5400_RS15975 PF17969 L,D-transpeptidase C-terminal domain D5400_RS15975 PF03734 L,D-transpeptidase catalytic domain D5400_RS15980 PF02683 Cytochrome C biogenesis protein transmembrane region D5400_RS15980 PF11412 Disulphide bond corrector protein DsbC D5400_RS15985 PF00578 AhpC/TSA family D5400_RS16010 PF00296 Luciferase-like monooxygenase D5400_RS16015 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS16020 PF00005 ABC transporter D5400_RS16025 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5400_RS16030 PF09383 NIL domain D5400_RS16030 PF00005 ABC transporter D5400_RS16035 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS16040 PF03180 NLPA lipoprotein D5400_RS16045 PF03358 NADPH-dependent FMN reductase D5400_RS16055 PF00296 Luciferase-like monooxygenase D5400_RS16065 PF00005 ABC transporter D5400_RS16070 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS16075 PF03358 NADPH-dependent FMN reductase D5400_RS16080 PF02082 Transcriptional regulator D5400_RS16090 PF01757 Acyltransferase family D5400_RS16095 PF00149 Calcineurin-like phosphoesterase D5400_RS16100 PF02706 Chain length determinant protein D5400_RS16100 PF13807 G-rich domain on putative tyrosine kinase D5400_RS16100 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D5400_RS16105 PF00483 Nucleotidyl transferase D5400_RS16110 PF00535 Glycosyl transferase family 2 D5400_RS16115 PF00535 Glycosyl transferase family 2 D5400_RS16120 PF00535 Glycosyl transferase family 2 D5400_RS16130 PF00722 Glycosyl hydrolases family 16 D5400_RS16135 PF01943 Polysaccharide biosynthesis protein D5400_RS16140 PF00535 Glycosyl transferase family 2 D5400_RS16145 PF04230 Polysaccharide pyruvyl transferase D5400_RS16150 PF00535 Glycosyl transferase family 2 D5400_RS16155 PF11089 Exopolysaccharide production repressor D5400_RS16160 PF02397 Bacterial sugar transferase D5400_RS16165 PF02563 Polysaccharide biosynthesis/export protein D5400_RS16205 PF03466 LysR substrate binding domain D5400_RS16205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS16215 PF00535 Glycosyl transferase family 2 D5400_RS16215 PF07238 PilZ domain D5400_RS16225 PF01270 Glycosyl hydrolases family 8 D5400_RS16240 PF13419 Haloacid dehalogenase-like hydrolase D5400_RS16255 PF08448 PAS fold D5400_RS16255 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS16260 PF01032 FecCD transport family D5400_RS16270 PF00005 ABC transporter D5400_RS16275 PF07715 TonB-dependent Receptor Plug Domain D5400_RS16275 PF00593 TonB dependent receptor D5400_RS16280 PF03547 Membrane transport protein D5400_RS16285 PF09335 SNARE associated Golgi protein D5400_RS16290 PF00155 Aminotransferase class I and II D5400_RS16310 PF00043 Glutathione S-transferase, C-terminal domain D5400_RS16310 PF02798 Glutathione S-transferase, N-terminal domain D5400_RS16315 PF01594 AI-2E family transporter D5400_RS16320 PF00672 HAMP domain D5400_RS16320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5400_RS16325 PF01048 Phosphorylase superfamily D5400_RS16325 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus D5400_RS16330 PF00781 Diacylglycerol kinase catalytic domain D5400_RS16350 PF03167 Uracil DNA glycosylase superfamily D5400_RS16360 PF13426 PAS domain D5400_RS16360 PF07568 Histidine kinase D5400_RS16360 PF13581 Histidine kinase-like ATPase domain D5400_RS16365 PF00571 CBS domain D5400_RS16365 PF00478 IMP dehydrogenase / GMP reductase domain D5400_RS16375 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5400_RS16375 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D5400_RS16380 PF11940 Domain of unknown function (DUF3458) Ig-like fold D5400_RS16380 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D5400_RS16380 PF01433 Peptidase family M1 domain D5400_RS16385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS16385 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS16385 PF00989 PAS fold D5400_RS16395 PF03710 Glutamate-ammonia ligase adenylyltransferase D5400_RS16395 PF08335 GlnD PII-uridylyltransferase D5400_RS16400 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS16400 PF00672 HAMP domain D5400_RS16400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS16405 PF00486 Transcriptional regulatory protein, C terminal D5400_RS16405 PF00072 Response regulator receiver domain D5400_RS16410 PF13180 PDZ domain D5400_RS16415 PF03918 Cytochrome C biogenesis protein D5400_RS16420 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D5400_RS16420 PF01578 Cytochrome C assembly protein D5400_RS16425 PF03100 CcmE D5400_RS16440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS16445 PF00486 Transcriptional regulatory protein, C terminal D5400_RS16445 PF00072 Response regulator receiver domain D5400_RS16485 PF03692 Putative zinc- or iron-chelating domain D5400_RS16490 PF00905 Penicillin binding protein transpeptidase domain D5400_RS16490 PF00912 Transglycosylase D5400_RS16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS16525 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS16530 PF17264 Family of unknown function (DUF5330) D5400_RS16535 PF02657 Fe-S metabolism associated domain D5400_RS16550 PF05443 ROS/MUCR transcriptional regulator protein D5400_RS16555 PF03334 Na+/H+ antiporter subunit D5400_RS16560 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D5400_RS16565 PF01899 Na+/H+ ion antiporter subunit D5400_RS16570 PF00361 Proton-conducting membrane transporter D5400_RS16575 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D5400_RS16580 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D5400_RS16585 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D5400_RS16585 PF00361 Proton-conducting membrane transporter D5400_RS16585 PF13244 Domain of unknown function (DUF4040) D5400_RS16590 PF01641 SelR domain D5400_RS16595 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D5400_RS16595 PF00326 Prolyl oligopeptidase family D5400_RS16605 PF00034 Cytochrome c D5400_RS16615 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D5400_RS16615 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D5400_RS16620 PF01063 Amino-transferase class IV D5400_RS16630 PF03734 L,D-transpeptidase catalytic domain D5400_RS16630 PF17969 L,D-transpeptidase C-terminal domain D5400_RS16635 PF05872 Bacterial protein of unknown function (DUF853) D5400_RS16645 PF01642 Methylmalonyl-CoA mutase D5400_RS16650 PF01642 Methylmalonyl-CoA mutase D5400_RS16650 PF02310 B12 binding domain D5400_RS16665 PF05974 Domain of unknown function (DUF892) D5400_RS16690 PF10609 NUBPL iron-transfer P-loop NTPase D5400_RS16700 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS16705 PF00005 ABC transporter D5400_RS16705 PF08402 TOBE domain D5400_RS16710 PF13416 Bacterial extracellular solute-binding protein D5400_RS16715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS16715 PF13426 PAS domain D5400_RS16715 PF00072 Response regulator receiver domain D5400_RS16885 PF04860 Phage portal protein D5400_RS16930 PF00145 C-5 cytosine-specific DNA methylase D5400_RS16945 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) D5400_RS17020 PF02899 Phage integrase, N-terminal SAM-like domain D5400_RS17020 PF00589 Phage integrase family D5400_RS17025 PF01575 MaoC like domain D5400_RS17035 PF03734 L,D-transpeptidase catalytic domain D5400_RS17035 PF17969 L,D-transpeptidase C-terminal domain D5400_RS17040 PF00009 Elongation factor Tu GTP binding domain D5400_RS17045 PF01507 Phosphoadenosine phosphosulfate reductase family D5400_RS17050 PF02632 BioY family D5400_RS17080 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D5400_RS17080 PF02896 PEP-utilising enzyme, TIM barrel domain D5400_RS17080 PF00391 PEP-utilising enzyme, mobile domain D5400_RS17090 PF02463 RecF/RecN/SMC N terminal domain D5400_RS17095 PF06965 Na+/H+ antiporter 1 D5400_RS17095 PF13462 Thioredoxin D5400_RS17105 PF00730 HhH-GPD superfamily base excision DNA repair protein D5400_RS17105 PF14815 NUDIX domain D5400_RS17115 PF18755 Restriction Enzyme Adenine Methylase Associated D5400_RS17115 PF01555 DNA methylase D5400_RS17120 PF13419 Haloacid dehalogenase-like hydrolase D5400_RS17130 PF14821 Threonine synthase N terminus D5400_RS17130 PF00291 Pyridoxal-phosphate dependent enzyme D5400_RS17135 PF00675 Insulinase (Peptidase family M16) D5400_RS17135 PF05193 Peptidase M16 inactive domain D5400_RS17140 PF13302 Acetyltransferase (GNAT) domain D5400_RS17145 PF00563 EAL domain D5400_RS17145 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS17145 PF13188 PAS domain D5400_RS17145 PF03707 Bacterial signalling protein N terminal repeat D5400_RS17150 PF02622 Uncharacterized ACR, COG1678 D5400_RS17160 PF00462 Glutaredoxin D5400_RS17160 PF08534 Redoxin D5400_RS17165 PF00075 RNase H D5400_RS17170 PF01636 Phosphotransferase enzyme family D5400_RS17175 PF02401 LytB protein D5400_RS17180 PF02104 SURF1 family D5400_RS17190 PF00510 Cytochrome c oxidase subunit III D5400_RS17195 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 D5400_RS17200 PF01040 UbiA prenyltransferase family D5400_RS17205 PF00115 Cytochrome C and Quinol oxidase polypeptide I D5400_RS17210 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D5400_RS17210 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D5400_RS17220 PF01523 Putative modulator of DNA gyrase D5400_RS17225 PF02146 Sir2 family D5400_RS17235 PF01243 Pyridoxamine 5'-phosphate oxidase D5400_RS17235 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D5400_RS17245 PF01556 DnaJ C terminal domain D5400_RS17245 PF00226 DnaJ domain D5400_RS17245 PF00684 DnaJ central domain D5400_RS17255 PF00300 Histidine phosphatase superfamily (branch 1) D5400_RS17260 PF01264 Chorismate synthase D5400_RS17265 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D5400_RS17265 PF00925 GTP cyclohydrolase II D5400_RS17270 PF00850 Histone deacetylase domain D5400_RS17275 PF02609 Exonuclease VII small subunit D5400_RS17280 PF00563 EAL domain D5400_RS17280 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS17280 PF03707 Bacterial signalling protein N terminal repeat D5400_RS17280 PF13188 PAS domain D5400_RS17285 PF02779 Transketolase, pyrimidine binding domain D5400_RS17285 PF02780 Transketolase, C-terminal domain D5400_RS17285 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D5400_RS17295 PF01728 FtsJ-like methyltransferase D5400_RS17295 PF01479 S4 domain D5400_RS17300 PF05958 tRNA (Uracil-5-)-methyltransferase D5400_RS17305 PF00378 Enoyl-CoA hydratase/isomerase D5400_RS17310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5400_RS17310 PF02770 Acyl-CoA dehydrogenase, middle domain D5400_RS17310 PF12806 Acetyl-CoA dehydrogenase C-terminal like D5400_RS17310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5400_RS17315 PF01300 Telomere recombination D5400_RS17315 PF03481 Putative GTP-binding controlling metal-binding D5400_RS17320 PF02913 FAD linked oxidases, C-terminal domain D5400_RS17320 PF01565 FAD binding domain D5400_RS17335 PF01040 UbiA prenyltransferase family D5400_RS17340 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D5400_RS17340 PF02843 Phosphoribosylglycinamide synthetase, C domain D5400_RS17340 PF02844 Phosphoribosylglycinamide synthetase, N domain D5400_RS17350 PF08000 Bacterial PH domain D5400_RS17355 PF05746 DALR anticodon binding domain D5400_RS17355 PF02092 Glycyl-tRNA synthetase beta subunit D5400_RS17360 PF02091 Glycyl-tRNA synthetase alpha subunit D5400_RS17370 PF06965 Na+/H+ antiporter 1 D5400_RS17370 PF01343 Peptidase family S49 D5400_RS17385 PF00348 Polyprenyl synthetase D5400_RS17395 PF00288 GHMP kinases N terminal domain D5400_RS17395 PF08544 GHMP kinases C terminal D5400_RS17400 PF00994 Probable molybdopterin binding domain D5400_RS17410 PF04055 Radical SAM superfamily D5400_RS17415 PF01351 Ribonuclease HII D5400_RS17420 PF00430 ATP synthase B/B' CF(0) D5400_RS17425 PF00430 ATP synthase B/B' CF(0) D5400_RS17430 PF00137 ATP synthase subunit C D5400_RS17435 PF00119 ATP synthase A chain D5400_RS17440 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter D5400_RS17450 PF01926 50S ribosome-binding GTPase D5400_RS17450 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D5400_RS17465 PF05992 SbmA/BacA-like family D5400_RS17470 PF06779 Uncharacterised MFS-type transporter YbfB D5400_RS17475 PF16363 GDP-mannose 4,6 dehydratase D5400_RS17485 PF03741 Integral membrane protein TerC family D5400_RS17490 PF00403 Heavy-metal-associated domain D5400_RS17505 PF09278 MerR, DNA binding D5400_RS17505 PF00376 MerR family regulatory protein D5400_RS17510 PF00027 Cyclic nucleotide-binding domain D5400_RS17510 PF13545 Crp-like helix-turn-helix domain D5400_RS17520 PF00196 Bacterial regulatory proteins, luxR family D5400_RS17520 PF00072 Response regulator receiver domain D5400_RS17525 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS17525 PF00989 PAS fold D5400_RS17525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS17530 PF00117 Glutamine amidotransferase class-I D5400_RS17530 PF02540 NAD synthase D5400_RS17530 PF00958 GMP synthase C terminal domain D5400_RS17550 PF01029 NusB family D5400_RS17550 PF01189 16S rRNA methyltransferase RsmB/F D5400_RS17560 PF00478 IMP dehydrogenase / GMP reductase domain D5400_RS17560 PF00571 CBS domain D5400_RS17565 PF00753 Metallo-beta-lactamase superfamily D5400_RS17570 PF01728 FtsJ-like methyltransferase D5400_RS17575 PF02541 Ppx/GppA phosphatase family D5400_RS17595 PF00580 UvrD/REP helicase N-terminal domain D5400_RS17595 PF13361 UvrD-like helicase C-terminal domain D5400_RS17605 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS17605 PF07694 5TMR of 5TMR-LYT D5400_RS17610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS17610 PF00072 Response regulator receiver domain D5400_RS17610 PF13426 PAS domain D5400_RS17640 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS17650 PF03480 Bacterial extracellular solute-binding protein, family 7 D5400_RS17655 PF01968 Hydantoinase/oxoprolinase D5400_RS17655 PF05378 Hydantoinase/oxoprolinase N-terminal region D5400_RS17670 PF01370 NAD dependent epimerase/dehydratase family D5400_RS17675 PF12680 SnoaL-like domain D5400_RS17680 PF16859 Tetracyclin repressor-like, C-terminal domain D5400_RS17680 PF00440 Bacterial regulatory proteins, tetR family D5400_RS17690 PF00106 short chain dehydrogenase D5400_RS17700 PF03466 LysR substrate binding domain D5400_RS17700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS17705 PF02525 Flavodoxin-like fold D5400_RS17715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS17715 PF03466 LysR substrate binding domain D5400_RS17720 PF00106 short chain dehydrogenase D5400_RS17730 PF00440 Bacterial regulatory proteins, tetR family D5400_RS17735 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D5400_RS17735 PF00326 Prolyl oligopeptidase family D5400_RS17740 PF00486 Transcriptional regulatory protein, C terminal D5400_RS17740 PF00072 Response regulator receiver domain D5400_RS17745 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS17745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS17745 PF08521 Two-component sensor kinase N-terminal D5400_RS17755 PF12146 Serine aminopeptidase, S33 D5400_RS17755 PF13026 Protein of unknown function (DUF3887) D5400_RS17760 PF00392 Bacterial regulatory proteins, gntR family D5400_RS17760 PF07729 FCD domain D5400_RS17765 PF03480 Bacterial extracellular solute-binding protein, family 7 D5400_RS17775 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS17785 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain D5400_RS17785 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain D5400_RS17790 PF07005 Sugar-binding N-terminal domain D5400_RS17790 PF17042 Nucleotide-binding C-terminal domain D5400_RS17805 PF00106 short chain dehydrogenase D5400_RS17810 PF03597 Cytochrome oxidase maturation protein cbb3-type D5400_RS17820 PF05751 FixH D5400_RS17825 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D5400_RS17825 PF12801 4Fe-4S binding domain D5400_RS17825 PF13746 4Fe-4S dicluster domain D5400_RS17830 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP D5400_RS17830 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D5400_RS17845 PF00115 Cytochrome C and Quinol oxidase polypeptide I D5400_RS17865 PF03814 Potassium-transporting ATPase A subunit D5400_RS17875 PF02669 K+-transporting ATPase, c chain D5400_RS17880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS17880 PF02702 Osmosensitive K+ channel His kinase sensor domain D5400_RS17880 PF13492 GAF domain D5400_RS17880 PF00512 His Kinase A (phospho-acceptor) domain D5400_RS17880 PF13493 Domain of unknown function (DUF4118) D5400_RS17885 PF00072 Response regulator receiver domain D5400_RS17885 PF00486 Transcriptional regulatory protein, C terminal D5400_RS17890 PF02423 Ornithine cyclodeaminase/mu-crystallin family D5400_RS17895 PF00491 Arginase family D5400_RS17900 PF01037 Lrp/AsnC ligand binding domain D5400_RS17910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS17910 PF03466 LysR substrate binding domain D5400_RS17915 PF02423 Ornithine cyclodeaminase/mu-crystallin family D5400_RS17920 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS17925 PF00005 ABC transporter D5400_RS17925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5400_RS17930 PF00005 ABC transporter D5400_RS17930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5400_RS17935 PF12911 N-terminal TM domain of oligopeptide transport permease C D5400_RS17935 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS17945 PF02633 Creatinine amidohydrolase D5400_RS17965 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase D5400_RS17965 PF03033 Glycosyltransferase family 28 N-terminal domain D5400_RS17975 PF01590 GAF domain D5400_RS17975 PF00158 Sigma-54 interaction domain D5400_RS17980 PF00005 ABC transporter D5400_RS17985 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS17990 PF00005 ABC transporter D5400_RS17995 PF02560 Cyanate lyase C-terminal domain D5400_RS18010 PF00378 Enoyl-CoA hydratase/isomerase D5400_RS18015 PF13193 AMP-binding enzyme C-terminal domain D5400_RS18015 PF00501 AMP-binding enzyme D5400_RS18020 PF00111 2Fe-2S iron-sulfur cluster binding domain D5400_RS18020 PF01799 [2Fe-2S] binding domain D5400_RS18025 PF00941 FAD binding domain in molybdopterin dehydrogenase D5400_RS18025 PF03450 CO dehydrogenase flavoprotein C-terminal domain D5400_RS18030 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5400_RS18030 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D5400_RS18040 PF00356 Bacterial regulatory proteins, lacI family D5400_RS18045 PF00005 ABC transporter D5400_RS18050 PF13407 Periplasmic binding protein domain D5400_RS18055 PF02653 Branched-chain amino acid transport system / permease component D5400_RS18060 PF02653 Branched-chain amino acid transport system / permease component D5400_RS18065 PF00294 pfkB family carbohydrate kinase D5400_RS18075 PF01380 SIS domain D5400_RS18090 PF00586 AIR synthase related protein, N-terminal domain D5400_RS18090 PF02769 AIR synthase related protein, C-terminal domain D5400_RS18100 PF06968 Biotin and Thiamin Synthesis associated domain D5400_RS18100 PF04055 Radical SAM superfamily D5400_RS18105 PF00795 Carbon-nitrogen hydrolase D5400_RS18115 PF00392 Bacterial regulatory proteins, gntR family D5400_RS18115 PF00155 Aminotransferase class I and II D5400_RS18135 PF12951 Passenger-associated-transport-repeat D5400_RS18135 PF03797 Autotransporter beta-domain D5400_RS18135 PF00082 Subtilase family D5400_RS18140 PF12833 Helix-turn-helix domain D5400_RS18145 PF03734 L,D-transpeptidase catalytic domain D5400_RS18150 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5400_RS18155 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS18160 PF00005 ABC transporter D5400_RS18165 PF00196 Bacterial regulatory proteins, luxR family D5400_RS18180 PF03372 Endonuclease/Exonuclease/phosphatase family D5400_RS18195 PF00072 Response regulator receiver domain D5400_RS18195 PF00196 Bacterial regulatory proteins, luxR family D5400_RS18210 PF00248 Aldo/keto reductase family D5400_RS18220 PF02733 Dak1 domain D5400_RS18225 PF02653 Branched-chain amino acid transport system / permease component D5400_RS18230 PF00005 ABC transporter D5400_RS18235 PF13407 Periplasmic binding protein domain D5400_RS18240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5400_RS18240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5400_RS18245 PF05343 M42 glutamyl aminopeptidase D5400_RS18250 PF02653 Branched-chain amino acid transport system / permease component D5400_RS18255 PF03437 BtpA family D5400_RS18260 PF00455 DeoR C terminal sensor domain D5400_RS18260 PF08220 DeoR-like helix-turn-helix domain D5400_RS18265 PF00392 Bacterial regulatory proteins, gntR family D5400_RS18265 PF07729 FCD domain D5400_RS18270 PF03480 Bacterial extracellular solute-binding protein, family 7 D5400_RS18280 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D5400_RS18280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS18285 PF02502 Ribose/Galactose Isomerase D5400_RS18340 PF00313 'Cold-shock' DNA-binding domain D5400_RS18350 PF01272 Transcription elongation factor, GreA/GreB, C-term D5400_RS18350 PF03449 Transcription elongation factor, N-terminal D5400_RS18355 PF02469 Fasciclin domain D5400_RS18365 PF00005 ABC transporter D5400_RS18370 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5400_RS18370 PF00005 ABC transporter D5400_RS18380 PF02653 Branched-chain amino acid transport system / permease component D5400_RS18405 PF00171 Aldehyde dehydrogenase family D5400_RS18415 PF00775 Dioxygenase D5400_RS18415 PF04444 Catechol dioxygenase N terminus D5400_RS18420 PF01494 FAD binding domain D5400_RS18435 PF00005 ABC transporter D5400_RS18440 PF00005 ABC transporter D5400_RS18450 PF00465 Iron-containing alcohol dehydrogenase D5400_RS18460 PF07886 BA14K-like protein D5400_RS18470 PF01593 Flavin containing amine oxidoreductase D5400_RS18475 PF00108 Thiolase, N-terminal domain D5400_RS18475 PF02803 Thiolase, C-terminal domain D5400_RS18480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5400_RS18480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5400_RS18485 PF01425 Amidase D5400_RS18490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS18500 PF03480 Bacterial extracellular solute-binding protein, family 7 D5400_RS18510 PF01292 Prokaryotic cytochrome b561 D5400_RS18515 PF13247 4Fe-4S dicluster domain D5400_RS18520 PF01568 Molydopterin dinucleotide binding domain D5400_RS18520 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D5400_RS18520 PF00384 Molybdopterin oxidoreductase D5400_RS18565 PF00034 Cytochrome c D5400_RS18570 PF00196 Bacterial regulatory proteins, luxR family D5400_RS18575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS18575 PF07730 Histidine kinase D5400_RS18600 PF00005 ABC transporter D5400_RS18615 PF01758 Sodium Bile acid symporter family D5400_RS18620 PF00082 Subtilase family D5400_RS18625 PF04542 Sigma-70 region 2 D5400_RS18625 PF08281 Sigma-70, region 4 D5400_RS18635 PF08241 Methyltransferase domain D5400_RS18640 PF01980 tRNA-methyltransferase O D5400_RS18650 PF00206 Lyase D5400_RS18650 PF10397 Adenylosuccinate lyase C-terminus D5400_RS18655 PF00108 Thiolase, N-terminal domain D5400_RS18655 PF02803 Thiolase, C-terminal domain D5400_RS18660 PF01144 Coenzyme A transferase D5400_RS18665 PF01144 Coenzyme A transferase D5400_RS18670 PF00775 Dioxygenase D5400_RS18675 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal D5400_RS18675 PF00775 Dioxygenase D5400_RS18680 PF02627 Carboxymuconolactone decarboxylase family D5400_RS18685 PF12697 Alpha/beta hydrolase family D5400_RS18690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS18690 PF03466 LysR substrate binding domain D5400_RS18695 PF00196 Bacterial regulatory proteins, luxR family D5400_RS18695 PF03472 Autoinducer binding domain D5400_RS18700 PF00501 AMP-binding enzyme D5400_RS18700 PF13193 AMP-binding enzyme C-terminal domain D5400_RS18705 PF00892 EamA-like transporter family D5400_RS18710 PF00563 EAL domain D5400_RS18710 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS18710 PF13188 PAS domain D5400_RS18710 PF03707 Bacterial signalling protein N terminal repeat D5400_RS18715 PF13660 Domain of unknown function (DUF4147) D5400_RS18715 PF05161 MOFRL family D5400_RS18720 PF00950 ABC 3 transport family D5400_RS18725 PF00950 ABC 3 transport family D5400_RS18730 PF00005 ABC transporter D5400_RS18735 PF01297 Zinc-uptake complex component A periplasmic D5400_RS18740 PF08676 MutL C terminal dimerisation domain D5400_RS18740 PF01119 DNA mismatch repair protein, C-terminal domain D5400_RS18750 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D5400_RS18755 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D5400_RS18770 PF00459 Inositol monophosphatase family D5400_RS18775 PF01523 Putative modulator of DNA gyrase D5400_RS18785 PF01734 Patatin-like phospholipase D5400_RS18795 PF01479 S4 domain D5400_RS18795 PF00849 RNA pseudouridylate synthase D5400_RS18800 PF14437 MafB19-like deaminase D5400_RS18810 PF08264 Anticodon-binding domain of tRNA D5400_RS18810 PF00133 tRNA synthetases class I (I, L, M and V) D5400_RS18815 PF01687 Riboflavin kinase D5400_RS18815 PF06574 FAD synthetase D5400_RS18825 PF00166 Chaperonin 10 Kd subunit D5400_RS18830 PF00118 TCP-1/cpn60 chaperonin family D5400_RS18835 PF01638 HxlR-like helix-turn-helix D5400_RS18845 PF01266 FAD dependent oxidoreductase D5400_RS18845 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D5400_RS18850 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS18855 PF02798 Glutathione S-transferase, N-terminal domain D5400_RS18855 PF00043 Glutathione S-transferase, C-terminal domain D5400_RS18860 PF01925 Sulfite exporter TauE/SafE D5400_RS18865 PF10415 Fumarase C C-terminus D5400_RS18865 PF00206 Lyase D5400_RS18875 PF01634 ATP phosphoribosyltransferase D5400_RS18880 PF13393 Histidyl-tRNA synthetase D5400_RS18885 PF03129 Anticodon binding domain D5400_RS18885 PF13393 Histidyl-tRNA synthetase D5400_RS18905 PF03352 Methyladenine glycosylase D5400_RS18910 PF17969 L,D-transpeptidase C-terminal domain D5400_RS18910 PF03734 L,D-transpeptidase catalytic domain D5400_RS18915 PF17969 L,D-transpeptidase C-terminal domain D5400_RS18915 PF01476 LysM domain D5400_RS18915 PF03734 L,D-transpeptidase catalytic domain D5400_RS18940 PF00486 Transcriptional regulatory protein, C terminal D5400_RS18940 PF00072 Response regulator receiver domain D5400_RS18945 PF00072 Response regulator receiver domain D5400_RS18945 PF00486 Transcriptional regulatory protein, C terminal D5400_RS18945 PF01627 Hpt domain D5400_RS18950 PF10090 Histidine phosphotransferase C-terminal domain D5400_RS18965 PF00588 SpoU rRNA Methylase family D5400_RS18975 PF00849 RNA pseudouridylate synthase D5400_RS18980 PF04542 Sigma-70 region 2 D5400_RS18980 PF00140 Sigma-70 factor, region 1.2 D5400_RS18980 PF04545 Sigma-70, region 4 D5400_RS18990 PF01292 Prokaryotic cytochrome b561 D5400_RS19000 PF00709 Adenylosuccinate synthetase D5400_RS19015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5400_RS19015 PF08269 Cache domain D5400_RS19025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D5400_RS19030 PF01842 ACT domain D5400_RS19030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5400_RS19030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5400_RS19035 PF00266 Aminotransferase class-V D5400_RS19065 PF13505 Outer membrane protein beta-barrel domain D5400_RS19070 PF02462 Opacity family porin protein D5400_RS19075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D5400_RS19075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D5400_RS19075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D5400_RS19075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D5400_RS19080 PF06480 FtsH Extracellular D5400_RS19080 PF01434 Peptidase family M41 D5400_RS19080 PF17862 AAA+ lid domain D5400_RS19080 PF00004 ATPase family associated with various cellular activities (AAA) D5400_RS19085 PF01171 PP-loop family D5400_RS19095 PF00691 OmpA family D5400_RS19100 PF04052 TolB amino-terminal domain D5400_RS19100 PF07676 WD40-like Beta Propeller Repeat D5400_RS19110 PF02472 Biopolymer transport protein ExbD/TolR D5400_RS19115 PF01618 MotA/TolQ/ExbB proton channel family D5400_RS19120 PF02386 Cation transport protein D5400_RS19125 PF03061 Thioesterase superfamily D5400_RS19140 PF01370 NAD dependent epimerase/dehydratase family D5400_RS19150 PF05491 RuvB C-terminal winged helix domain D5400_RS19150 PF05496 Holliday junction DNA helicase RuvB P-loop domain D5400_RS19150 PF17864 RuvB AAA lid domain D5400_RS19155 PF01330 RuvA N terminal domain D5400_RS19155 PF07499 RuvA, C-terminal domain D5400_RS19160 PF02075 Crossover junction endodeoxyribonuclease RuvC D5400_RS19165 PF00296 Luciferase-like monooxygenase D5400_RS19175 PF01709 Transcriptional regulator D5400_RS19190 PF03741 Integral membrane protein TerC family D5400_RS19190 PF03471 Transporter associated domain D5400_RS19195 PF13277 YmdB-like protein D5400_RS19225 PF02779 Transketolase, pyrimidine binding domain D5400_RS19225 PF02780 Transketolase, C-terminal domain D5400_RS19225 PF00456 Transketolase, thiamine diphosphate binding domain D5400_RS19230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D5400_RS19230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D5400_RS19235 PF03471 Transporter associated domain D5400_RS19235 PF00999 Sodium/hydrogen exchanger family D5400_RS19235 PF02080 TrkA-C domain D5400_RS19240 PF00162 Phosphoglycerate kinase D5400_RS19245 PF00274 Fructose-bisphosphate aldolase class-I D5400_RS19265 PF00444 Ribosomal protein L36 D5400_RS19270 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D5400_RS19270 PF02222 ATP-grasp domain D5400_RS19275 PF00731 AIR carboxylase D5400_RS19290 PF01022 Bacterial regulatory protein, arsR family D5400_RS19295 PF13193 AMP-binding enzyme C-terminal domain D5400_RS19295 PF00501 AMP-binding enzyme D5400_RS19315 PF09285 Elongation factor P, C-terminal D5400_RS19315 PF08207 Elongation factor P (EF-P) KOW-like domain D5400_RS19315 PF01132 Elongation factor P (EF-P) OB domain D5400_RS19320 PF00459 Inositol monophosphatase family D5400_RS19330 PF01389 OmpA-like transmembrane domain D5400_RS19330 PF00691 OmpA family D5400_RS19335 PF00005 ABC transporter D5400_RS19335 PF00664 ABC transporter transmembrane region D5400_RS19340 PF01197 Ribosomal protein L31 D5400_RS19355 PF00109 Beta-ketoacyl synthase, N-terminal domain D5400_RS19355 PF08240 Alcohol dehydrogenase GroES-like domain D5400_RS19355 PF00698 Acyl transferase domain D5400_RS19355 PF02801 Beta-ketoacyl synthase, C-terminal domain D5400_RS19355 PF08659 KR domain D5400_RS19355 PF00550 Phosphopantetheine attachment site D5400_RS19355 PF16197 Ketoacyl-synthetase C-terminal extension D5400_RS19355 PF14765 Polyketide synthase dehydratase D5400_RS19365 PF02887 Pyruvate kinase, alpha/beta domain D5400_RS19365 PF00224 Pyruvate kinase, barrel domain D5400_RS19380 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) D5400_RS19385 PF03350 Uncharacterized protein family, UPF0114 D5400_RS19395 PF00072 Response regulator receiver domain D5400_RS19395 PF02954 Bacterial regulatory protein, Fis family D5400_RS19395 PF00158 Sigma-54 interaction domain D5400_RS19410 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D5400_RS19420 PF03435 Saccharopine dehydrogenase NADP binding domain D5400_RS19420 PF16653 Saccharopine dehydrogenase C-terminal domain D5400_RS19430 PF00149 Calcineurin-like phosphoesterase D5400_RS19430 PF02872 5'-nucleotidase, C-terminal domain D5400_RS19435 PF00762 Ferrochelatase D5400_RS19440 PF00571 CBS domain D5400_RS19440 PF01380 SIS domain D5400_RS19450 PF00483 Nucleotidyl transferase D5400_RS19455 PF13406 Transglycosylase SLT domain D5400_RS19465 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D5400_RS19465 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5400_RS19470 PF04898 Glutamate synthase central domain D5400_RS19470 PF01645 Conserved region in glutamate synthase D5400_RS19470 PF00310 Glutamine amidotransferases class-II D5400_RS19470 PF01493 GXGXG motif D5400_RS19475 PF01212 Beta-eliminating lyase D5400_RS19485 PF00011 Hsp20/alpha crystallin family D5400_RS19490 PF12146 Serine aminopeptidase, S33 D5400_RS19495 PF00459 Inositol monophosphatase family D5400_RS19505 PF00072 Response regulator receiver domain D5400_RS19530 PF02653 Branched-chain amino acid transport system / permease component D5400_RS19535 PF02653 Branched-chain amino acid transport system / permease component D5400_RS19545 PF00005 ABC transporter D5400_RS19550 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5400_RS19550 PF00005 ABC transporter D5400_RS19560 PF01575 MaoC like domain D5400_RS19570 PF08669 Glycine cleavage T-protein C-terminal barrel domain D5400_RS19570 PF01571 Aminomethyltransferase folate-binding domain D5400_RS19570 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5400_RS19570 PF17806 Sarcosine oxidase A3 domain D5400_RS19580 PF01266 FAD dependent oxidoreductase D5400_RS19585 PF01165 Ribosomal protein S21 D5400_RS19595 PF02233 NAD(P) transhydrogenase beta subunit D5400_RS19600 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D5400_RS19605 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D5400_RS19605 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D5400_RS19620 PF13188 PAS domain D5400_RS19620 PF03707 Bacterial signalling protein N terminal repeat D5400_RS19620 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS19620 PF00563 EAL domain D5400_RS19635 PF03480 Bacterial extracellular solute-binding protein, family 7 D5400_RS19640 PF07722 Peptidase C26 D5400_RS19645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5400_RS19645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5400_RS19650 PF00356 Bacterial regulatory proteins, lacI family D5400_RS19660 PF02633 Creatinine amidohydrolase D5400_RS19670 PF02492 CobW/HypB/UreG, nucleotide-binding domain D5400_RS19670 PF07683 Cobalamin synthesis protein cobW C-terminal domain D5400_RS19695 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D5400_RS19695 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D5400_RS19700 PF03466 LysR substrate binding domain D5400_RS19700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS19725 PF00155 Aminotransferase class I and II D5400_RS19730 PF02080 TrkA-C domain D5400_RS19730 PF03600 Citrate transporter D5400_RS19755 PF01081 KDPG and KHG aldolase D5400_RS19765 PF17773 UPF0176 acylphosphatase like domain D5400_RS19765 PF00581 Rhodanese-like domain D5400_RS19770 PF00232 Glycosyl hydrolase family 1 D5400_RS19775 PF13407 Periplasmic binding protein domain D5400_RS19780 PF02653 Branched-chain amino acid transport system / permease component D5400_RS19785 PF00005 ABC transporter D5400_RS19790 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D5400_RS19790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5400_RS19800 PF00356 Bacterial regulatory proteins, lacI family D5400_RS19805 PF01261 Xylose isomerase-like TIM barrel D5400_RS19810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5400_RS19810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5400_RS19815 PF00356 Bacterial regulatory proteins, lacI family D5400_RS19820 PF15887 Putative zinc-binding metallo-peptidase D5400_RS19820 PF10005 zinc-ribbon domain D5400_RS19825 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5400_RS19830 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS19835 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS19840 PF00005 ABC transporter D5400_RS19845 PF01047 MarR family D5400_RS19860 PF00593 TonB dependent receptor D5400_RS19860 PF07715 TonB-dependent Receptor Plug Domain D5400_RS19870 PF01032 FecCD transport family D5400_RS19875 PF00005 ABC transporter D5400_RS19915 PF03466 LysR substrate binding domain D5400_RS19915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5400_RS19920 PF00141 Peroxidase D5400_RS19925 PF05401 Nodulation protein S (NodS) D5400_RS19930 PF02585 GlcNAc-PI de-N-acetylase D5400_RS19950 PF03275 UDP-galactopyranose mutase D5400_RS19955 PF02082 Transcriptional regulator D5400_RS19965 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS19970 PF00528 Binding-protein-dependent transport system inner membrane component D5400_RS19975 PF12857 TOBE-like domain D5400_RS19975 PF00005 ABC transporter D5400_RS19985 PF02080 TrkA-C domain D5400_RS19985 PF03600 Citrate transporter D5400_RS19995 PF01850 PIN domain D5400_RS20000 PF07704 Rv0623-like transcription factor D5400_RS20030 PF02361 Cobalt transport protein D5400_RS20035 PF00005 ABC transporter D5400_RS20040 PF02632 BioY family D5400_RS20050 PF00171 Aldehyde dehydrogenase family D5400_RS20055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5400_RS20055 PF00205 Thiamine pyrophosphate enzyme, central domain D5400_RS20055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5400_RS20060 PF00596 Class II Aldolase and Adducin N-terminal domain D5400_RS20070 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS20080 PF09084 NMT1/THI5 like D5400_RS20085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5400_RS20085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D5400_RS20090 PF00970 Oxidoreductase FAD-binding domain D5400_RS20090 PF00111 2Fe-2S iron-sulfur cluster binding domain D5400_RS20090 PF00175 Oxidoreductase NAD-binding domain D5400_RS20095 PF00355 Rieske [2Fe-2S] domain D5400_RS20115 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS20135 PF01527 Transposase D5400_RS20145 PF09339 IclR helix-turn-helix domain D5400_RS20145 PF01614 Bacterial transcriptional regulator D5400_RS20150 PF02515 CoA-transferase family III D5400_RS20160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D5400_RS20160 PF02785 Biotin carboxylase C-terminal domain D5400_RS20160 PF00289 Biotin carboxylase, N-terminal domain D5400_RS20165 PF00682 HMGL-like D5400_RS20165 PF02436 Conserved carboxylase domain D5400_RS20170 PF03480 Bacterial extracellular solute-binding protein, family 7 D5400_RS20180 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS20190 PF00857 Isochorismatase family D5400_RS20200 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D5400_RS20205 PF00561 alpha/beta hydrolase fold D5400_RS20210 PF00682 HMGL-like D5400_RS20210 PF07836 DmpG-like communication domain D5400_RS20215 PF01118 Semialdehyde dehydrogenase, NAD binding domain D5400_RS20215 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation D5400_RS20220 PF01557 Fumarylacetoacetate (FAA) hydrolase family D5400_RS20225 PF00355 Rieske [2Fe-2S] domain D5400_RS20235 PF14759 Reductase C-terminal D5400_RS20235 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5400_RS20245 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5400_RS20260 PF00355 Rieske [2Fe-2S] domain D5400_RS20260 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D5400_RS20275 PF01614 Bacterial transcriptional regulator D5400_RS20275 PF09339 IclR helix-turn-helix domain D5400_RS20285 PF13276 HTH-like domain D5400_RS20285 PF00665 Integrase core domain D5400_RS20290 PF17841 BID domain of Bartonella effector protein (Bep) D5400_RS20290 PF01443 Viral (Superfamily 1) RNA helicase D5400_RS20290 PF03389 MobA/MobL family D5400_RS20300 PF06412 Conjugal transfer protein TraD D5400_RS20305 PF13676 TIR domain D5400_RS20320 PF04555 Restriction endonuclease XhoI D5400_RS20325 PF12950 TaqI-like C-terminal specificity domain D5400_RS20325 PF07669 Eco57I restriction-modification methylase D5400_RS20330 PF18818 Metallopeptidase superfamily domain D5400_RS20330 PF08401 Domain of unknown function (DUF1738) D5400_RS20355 PF13289 SIR2-like domain D5400_RS20395 PF16658 Class II release factor RF3, C-terminal domain D5400_RS20395 PF00009 Elongation factor Tu GTP binding domain D5400_RS20400 PF00118 TCP-1/cpn60 chaperonin family D5400_RS20410 PF01661 Macro domain D5400_RS20445 PF01740 STAS domain D5400_RS20445 PF00916 Sulfate permease family D5400_RS20450 PF00582 Universal stress protein family D5400_RS20460 PF01757 Acyltransferase family D5400_RS20480 PF12728 Helix-turn-helix domain D5400_RS20480 PF12727 PBP superfamily domain D5400_RS20530 PF04225 Opacity-associated protein A LysM-like domain D5400_RS20530 PF01551 Peptidase family M23 D5400_RS20535 PF01476 LysM domain D5400_RS20535 PF03734 L,D-transpeptidase catalytic domain D5400_RS20540 PF00004 ATPase family associated with various cellular activities (AAA) D5400_RS20540 PF02861 Clp amino terminal domain, pathogenicity island component D5400_RS20540 PF17871 AAA lid domain D5400_RS20540 PF07724 AAA domain (Cdc48 subfamily) D5400_RS20540 PF10431 C-terminal, D2-small domain, of ClpB protein D5400_RS20550 PF05175 Methyltransferase small domain D5400_RS20550 PF17827 PrmC N-terminal domain D5400_RS20555 PF03462 PCRF domain D5400_RS20555 PF00472 RF-1 domain D5400_RS20560 PF02896 PEP-utilising enzyme, TIM barrel domain D5400_RS20560 PF05524 PEP-utilising enzyme, N-terminal D5400_RS20560 PF00391 PEP-utilising enzyme, mobile domain D5400_RS20565 PF13840 ACT domain D5400_RS20565 PF00696 Amino acid kinase family D5400_RS20565 PF01842 ACT domain D5400_RS20580 PF00795 Carbon-nitrogen hydrolase D5400_RS20585 PF00462 Glutaredoxin D5400_RS20590 PF00156 Phosphoribosyl transferase domain D5400_RS20610 PF00293 NUDIX domain D5400_RS20620 PF01960 ArgJ family D5400_RS20630 PF01043 SecA preprotein cross-linking domain D5400_RS20630 PF02810 SEC-C motif D5400_RS20630 PF07516 SecA Wing and Scaffold domain D5400_RS20630 PF07517 SecA DEAD-like domain D5400_RS20645 PF13193 AMP-binding enzyme C-terminal domain D5400_RS20645 PF00501 AMP-binding enzyme D5400_RS20650 PF00563 EAL domain D5400_RS20650 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS20650 PF03707 Bacterial signalling protein N terminal repeat D5400_RS20665 PF07733 Bacterial DNA polymerase III alpha NTPase domain D5400_RS20665 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D5400_RS20665 PF14579 Helix-hairpin-helix motif D5400_RS20665 PF00929 Exonuclease D5400_RS20665 PF02811 PHP domain D5400_RS20665 PF11490 DNA polymerase III polC-type N-terminus II D5400_RS20675 PF12833 Helix-turn-helix domain D5400_RS20675 PF02805 Metal binding domain of Ada D5400_RS20675 PF00730 HhH-GPD superfamily base excision DNA repair protein D5400_RS20675 PF06029 AlkA N-terminal domain D5400_RS20680 PF00749 tRNA synthetases class I (E and Q), catalytic domain D5400_RS20690 PF03631 Virulence factor BrkB D5400_RS20695 PF00106 short chain dehydrogenase D5400_RS20705 PF01923 Cobalamin adenosyltransferase D5400_RS20715 PF01012 Electron transfer flavoprotein domain D5400_RS20720 PF01012 Electron transfer flavoprotein domain D5400_RS20720 PF00766 Electron transfer flavoprotein FAD-binding domain D5400_RS20725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5400_RS20725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5400_RS20730 PF08534 Redoxin D5400_RS20735 PF00206 Lyase D5400_RS20735 PF14698 Argininosuccinate lyase C-terminal D5400_RS20745 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D5400_RS20745 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D5400_RS20750 PF00990 Diguanylate cyclase, GGDEF domain D5400_RS20760 PF00072 Response regulator receiver domain D5400_RS20765 PF00072 Response regulator receiver domain D5400_RS20765 PF13426 PAS domain D5400_RS20765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5400_RS20770 PF00156 Phosphoribosyl transferase domain D5400_RS20780 PF00005 ABC transporter D5400_RS20810 PF02153 Prephenate dehydrogenase D5400_RS20815 PF00155 Aminotransferase class I and II D5400_RS20820 PF00561 alpha/beta hydrolase fold D5400_RS20825 PF00561 alpha/beta hydrolase fold D5400_RS20825 PF07021 Methionine biosynthesis protein MetW D5400_RS20840 PF01209 ubiE/COQ5 methyltransferase family D5400_RS20850 PF16123 Hydroxyacylglutathione hydrolase C-terminus D5400_RS20850 PF00753 Metallo-beta-lactamase superfamily D5400_RS20870 PF00830 Ribosomal L28 family D5400_RS20875 PF02592 Putative vitamin uptake transporter D5400_RS20885 PF11775 Cobalamin biosynthesis protein CobT VWA domain D5400_RS20885 PF06213 Cobalamin biosynthesis protein CobT D5400_RS20890 PF08406 CbbQ/NirQ/NorQ C-terminal D5400_RS20890 PF12556 Cobaltochelatase CobS subunit N terminal D5400_RS20890 PF07728 AAA domain (dynein-related subfamily) D5400_RS20895 PF00226 DnaJ domain D5400_RS20900 PF01722 BolA-like protein D5400_RS20905 PF00571 CBS domain D5400_RS20905 PF01595 Cyclin M transmembrane N-terminal domain D5400_RS20905 PF03471 Transporter associated domain D5400_RS20910 PF01761 3-dehydroquinate synthase D5400_RS20915 PF01202 Shikimate kinase D5400_RS20925 PF00589 Phage integrase family D5400_RS20925 PF02899 Phage integrase, N-terminal SAM-like domain D5400_RS20930 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D5400_RS20940 PF00501 AMP-binding enzyme D5400_RS20940 PF13193 AMP-binding enzyme C-terminal domain D5400_RS20945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5400_RS20945 PF02770 Acyl-CoA dehydrogenase, middle domain D5400_RS20945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5400_RS20950 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5400_RS20950 PF00378 Enoyl-CoA hydratase/isomerase D5400_RS20950 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5400_RS20965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5400_RS20970 PF02569 Pantoate-beta-alanine ligase D5400_RS20975 PF13417 Glutathione S-transferase, N-terminal domain D5400_RS20980 PF00578 AhpC/TSA family D5400_RS20980 PF10417 C-terminal domain of 1-Cys peroxiredoxin D5400_RS20990 PF02441 Flavoprotein D5400_RS20990 PF04127 DNA / pantothenate metabolism flavoprotein D5400_RS21000 PF03109 ABC1 family D5400_RS21005 PF01209 ubiE/COQ5 methyltransferase family D5400_RS21010 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D5400_RS21010 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D5400_RS21010 PF06827 Zinc finger found in FPG and IleRS D5400_RS21015 PF00378 Enoyl-CoA hydratase/isomerase D5400_RS21020 PF01649 Ribosomal protein S20