locus-tag class description AMC99_RS00005 PF01709 Transcriptional regulator AMC99_RS00010 PF02075 Crossover junction endodeoxyribonuclease RuvC AMC99_RS00015 PF03960 ArsC family AMC99_RS00020 PF04973 Nicotinamide mononucleotide transporter AMC99_RS00030 PF03009 Glycerophosphoryl diester phosphodiesterase family AMC99_RS00035 PF14437 MafB19-like deaminase AMC99_RS00040 PF07690 Major Facilitator Superfamily AMC99_RS00045 PF08241 Methyltransferase domain AMC99_RS00050 PF01842 ACT domain AMC99_RS00050 PF13840 ACT domain AMC99_RS00050 PF00696 Amino acid kinase family AMC99_RS00065 PF03060 Nitronate monooxygenase AMC99_RS00085 PF00551 Formyl transferase AMC99_RS00095 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMC99_RS00095 PF13360 PQQ-like domain AMC99_RS00100 PF01145 SPFH domain / Band 7 family AMC99_RS00100 PF16200 C-terminal region of band_7 AMC99_RS00120 PF13356 Arm DNA-binding domain AMC99_RS00120 PF00589 Phage integrase family AMC99_RS00120 PF14659 Phage integrase, N-terminal SAM-like domain AMC99_RS00135 PF01464 Transglycosylase SLT domain AMC99_RS00150 PF02195 ParB-like nuclease domain AMC99_RS00160 PF01381 Helix-turn-helix AMC99_RS00175 PF02481 DNA recombination-mediator protein A AMC99_RS00175 PF17782 DprA winged helix domain AMC99_RS00185 PF18255 DNA processing protein A sterile alpha motif domain AMC99_RS00185 PF02481 DNA recombination-mediator protein A AMC99_RS00210 PF08401 Domain of unknown function (DUF1738) AMC99_RS00210 PF18818 Metallopeptidase superfamily domain AMC99_RS00230 PF00436 Single-strand binding protein family AMC99_RS00255 PF07057 DNA helicase TraI AMC99_RS00255 PF08751 TrwC relaxase AMC99_RS00255 PF18272 single-stranded DNA binding TraI N-terminal subdomain AMC99_RS00255 PF18340 DNA relaxase TraI 2B/2B-like domain AMC99_RS00275 PF04434 SWIM zinc finger AMC99_RS00275 PF00176 SNF2 family N-terminal domain AMC99_RS00275 PF00271 Helicase conserved C-terminal domain AMC99_RS00290 PF03852 DNA mismatch endonuclease Vsr AMC99_RS00295 PF18284 DNA methylase N-terminal domain AMC99_RS00295 PF00145 C-5 cytosine-specific DNA methylase AMC99_RS00300 PF00171 Aldehyde dehydrogenase family AMC99_RS00320 PF06122 Conjugative relaxosome accessory transposon protein AMC99_RS00340 PF06834 TraU protein AMC99_RS00350 PF10502 Signal peptidase, peptidase S26 AMC99_RS00415 PF00403 Heavy-metal-associated domain AMC99_RS00420 PF00873 AcrB/AcrD/AcrF family AMC99_RS00425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMC99_RS00430 PF02321 Outer membrane efflux protein AMC99_RS00445 PF00376 MerR family regulatory protein AMC99_RS00445 PF09278 MerR, DNA binding AMC99_RS00460 PF05275 Copper resistance protein B precursor (CopB) AMC99_RS00465 PF07731 Multicopper oxidase AMC99_RS00465 PF00394 Multicopper oxidase AMC99_RS00465 PF07732 Multicopper oxidase AMC99_RS00470 PF04542 Sigma-70 region 2 AMC99_RS00470 PF08281 Sigma-70, region 4 AMC99_RS00475 PF13801 Heavy-metal resistance AMC99_RS00560 PF00072 Response regulator receiver domain AMC99_RS00560 PF00486 Transcriptional regulatory protein, C terminal AMC99_RS00565 PF00512 His Kinase A (phospho-acceptor) domain AMC99_RS00565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS00565 PF00672 HAMP domain AMC99_RS00585 PF00920 Dehydratase family AMC99_RS00590 PF04055 Radical SAM superfamily AMC99_RS00600 PF02082 Transcriptional regulator AMC99_RS00620 PF00484 Carbonic anhydrase AMC99_RS00645 PF07690 Major Facilitator Superfamily AMC99_RS00650 PF01568 Molydopterin dinucleotide binding domain AMC99_RS00650 PF00384 Molybdopterin oxidoreductase AMC99_RS00650 PF14710 Respiratory nitrate reductase alpha N-terminal AMC99_RS00655 PF13247 4Fe-4S dicluster domain AMC99_RS00655 PF14711 Respiratory nitrate reductase beta C-terminal AMC99_RS00660 PF02613 Nitrate reductase delta subunit AMC99_RS00665 PF02665 Nitrate reductase gamma subunit AMC99_RS00670 PF00639 PPIC-type PPIASE domain AMC99_RS00670 PF09312 SurA N-terminal domain AMC99_RS00675 PF06463 Molybdenum Cofactor Synthesis C AMC99_RS00675 PF04055 Radical SAM superfamily AMC99_RS00685 PF02391 MoaE protein AMC99_RS00690 PF00994 Probable molybdopterin binding domain AMC99_RS00695 PF00994 Probable molybdopterin binding domain AMC99_RS00695 PF03454 MoeA C-terminal region (domain IV) AMC99_RS00695 PF03453 MoeA N-terminal region (domain I and II) AMC99_RS00710 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMC99_RS00710 PF01243 Pyridoxamine 5'-phosphate oxidase AMC99_RS00715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS00715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS00715 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS00730 PF13545 Crp-like helix-turn-helix domain AMC99_RS00730 PF00027 Cyclic nucleotide-binding domain AMC99_RS00735 PF01758 Sodium Bile acid symporter family AMC99_RS00740 PF13520 Amino acid permease AMC99_RS00750 PF03466 LysR substrate binding domain AMC99_RS00750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMC99_RS00755 PF00171 Aldehyde dehydrogenase family AMC99_RS00760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMC99_RS00760 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMC99_RS00765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS00765 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS00765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS00780 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMC99_RS00780 PF00037 4Fe-4S binding domain AMC99_RS00780 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMC99_RS00785 PF02634 FdhD/NarQ family AMC99_RS00790 PF01568 Molydopterin dinucleotide binding domain AMC99_RS00790 PF00384 Molybdopterin oxidoreductase AMC99_RS00790 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMC99_RS00790 PF12838 4Fe-4S dicluster domain AMC99_RS00790 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMC99_RS00800 PF03358 NADPH-dependent FMN reductase AMC99_RS00835 PF00664 ABC transporter transmembrane region AMC99_RS00835 PF00005 ABC transporter AMC99_RS00845 PF01943 Polysaccharide biosynthesis protein AMC99_RS00845 PF14667 Polysaccharide biosynthesis C-terminal domain AMC99_RS00850 PF01757 Acyltransferase family AMC99_RS00885 PF13439 Glycosyltransferase Family 4 AMC99_RS00885 PF00534 Glycosyl transferases group 1 AMC99_RS00890 PF13807 G-rich domain on putative tyrosine kinase AMC99_RS00890 PF02706 Chain length determinant protein AMC99_RS00890 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMC99_RS00905 PF02350 UDP-N-acetylglucosamine 2-epimerase AMC99_RS00910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMC99_RS00910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMC99_RS00910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMC99_RS00925 PF02515 CoA-transferase family III AMC99_RS00930 PF06055 Exopolysaccharide synthesis, ExoD AMC99_RS00935 PF02321 Outer membrane efflux protein AMC99_RS00940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMC99_RS00945 PF12704 MacB-like periplasmic core domain AMC99_RS00945 PF02687 FtsX-like permease family AMC99_RS00945 PF00005 ABC transporter AMC99_RS00955 PF13977 BetI-type transcriptional repressor, C-terminal AMC99_RS00955 PF00440 Bacterial regulatory proteins, tetR family AMC99_RS00960 PF17862 AAA+ lid domain AMC99_RS00960 PF00004 ATPase family associated with various cellular activities (AAA) AMC99_RS00960 PF01434 Peptidase family M41 AMC99_RS00980 PF10609 NUBPL iron-transfer P-loop NTPase AMC99_RS00985 PF01192 RNA polymerase Rpb6 AMC99_RS00990 PF13396 Phospholipase_D-nuclease N-terminal AMC99_RS00990 PF13091 PLD-like domain AMC99_RS00995 PF00772 DnaB-like helicase N terminal domain AMC99_RS00995 PF03796 DnaB-like helicase C terminal domain AMC99_RS01000 PF06793 Uncharacterised protein family (UPF0262) AMC99_RS01010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMC99_RS01015 PF04239 Protein of unknown function (DUF421) AMC99_RS01020 PF18027 Cytosolic carboxypeptidase N-terminal domain AMC99_RS01020 PF00246 Zinc carboxypeptidase AMC99_RS01030 PF01370 NAD dependent epimerase/dehydratase family AMC99_RS01035 PF00444 Ribosomal protein L36 AMC99_RS01050 PF01638 HxlR-like helix-turn-helix AMC99_RS01065 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMC99_RS01065 PF01078 Magnesium chelatase, subunit ChlI AMC99_RS01075 PF00825 Ribonuclease P AMC99_RS01080 PF02096 60Kd inner membrane protein AMC99_RS01080 PF14849 YidC periplasmic domain AMC99_RS01085 PF01926 50S ribosome-binding GTPase AMC99_RS01095 PF13417 Glutathione S-transferase, N-terminal domain AMC99_RS01095 PF00043 Glutathione S-transferase, C-terminal domain AMC99_RS01110 PF07687 Peptidase dimerisation domain AMC99_RS01110 PF01546 Peptidase family M20/M25/M40 AMC99_RS01115 PF00375 Sodium:dicarboxylate symporter family AMC99_RS01125 PF10576 Iron-sulfur binding domain of endonuclease III AMC99_RS01125 PF00730 HhH-GPD superfamily base excision DNA repair protein AMC99_RS01125 PF00633 Helix-hairpin-helix motif AMC99_RS01135 PF01113 Dihydrodipicolinate reductase, N-terminus AMC99_RS01135 PF05173 Dihydrodipicolinate reductase, C-terminus AMC99_RS01140 PF00561 alpha/beta hydrolase fold AMC99_RS01145 PF02146 Sir2 family AMC99_RS01155 PF00899 ThiF family AMC99_RS01165 PF00308 Bacterial dnaA protein AMC99_RS01165 PF08299 Bacterial dnaA protein helix-turn-helix AMC99_RS01165 PF11638 DnaA N-terminal domain AMC99_RS01170 PF01649 Ribosomal protein S20 AMC99_RS01175 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMC99_RS01175 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMC99_RS01175 PF06827 Zinc finger found in FPG and IleRS AMC99_RS01180 PF01209 ubiE/COQ5 methyltransferase family AMC99_RS01185 PF03109 ABC1 family AMC99_RS01200 PF02441 Flavoprotein AMC99_RS01200 PF04127 DNA / pantothenate metabolism flavoprotein AMC99_RS01205 PF00692 dUTPase AMC99_RS01225 PF00579 tRNA synthetases class I (W and Y) AMC99_RS01230 PF03023 Lipid II flippase MurJ AMC99_RS01235 PF02556 Preprotein translocase subunit SecB AMC99_RS01240 PF04280 Tim44-like domain AMC99_RS01270 PF00141 Peroxidase AMC99_RS01275 PF13192 Thioredoxin domain AMC99_RS01275 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMC99_RS01280 PF00578 AhpC/TSA family AMC99_RS01280 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMC99_RS01285 PF00144 Beta-lactamase AMC99_RS01290 PF01264 Chorismate synthase AMC99_RS01295 PF07499 RuvA, C-terminal domain AMC99_RS01295 PF01330 RuvA N terminal domain AMC99_RS01305 PF17864 RuvB AAA lid domain AMC99_RS01305 PF05491 RuvB C-terminal winged helix domain AMC99_RS01305 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMC99_RS01335 PF00694 Aconitase C-terminal domain AMC99_RS01335 PF00330 Aconitase family (aconitate hydratase) AMC99_RS01340 PF00892 EamA-like transporter family AMC99_RS01345 PF03734 L,D-transpeptidase catalytic domain AMC99_RS01345 PF01471 Putative peptidoglycan binding domain AMC99_RS01355 PF00850 Histone deacetylase domain AMC99_RS01365 PF04551 GcpE protein AMC99_RS01370 PF01544 CorA-like Mg2+ transporter protein AMC99_RS01375 PF00106 short chain dehydrogenase AMC99_RS01385 PF05552 Conserved TM helix AMC99_RS01400 PF00583 Acetyltransferase (GNAT) family AMC99_RS01420 PF17863 AAA lid domain AMC99_RS01420 PF07726 ATPase family associated with various cellular activities (AAA) AMC99_RS01435 PF00800 Prephenate dehydratase AMC99_RS01440 PF00034 Cytochrome c AMC99_RS01445 PF01728 FtsJ-like methyltransferase AMC99_RS01450 PF02541 Ppx/GppA phosphatase family AMC99_RS01475 PF08543 Phosphomethylpyrimidine kinase AMC99_RS01480 PF06906 Protein of unknown function (DUF1272) AMC99_RS01485 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMC99_RS01485 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMC99_RS01485 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMC99_RS01485 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMC99_RS01495 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMC99_RS01495 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMC99_RS01505 PF04542 Sigma-70 region 2 AMC99_RS01505 PF08281 Sigma-70, region 4 AMC99_RS01515 PF13581 Histidine kinase-like ATPase domain AMC99_RS01515 PF13426 PAS domain AMC99_RS01515 PF07536 HWE histidine kinase AMC99_RS01520 PF00072 Response regulator receiver domain AMC99_RS01525 PF13545 Crp-like helix-turn-helix domain AMC99_RS01525 PF00027 Cyclic nucleotide-binding domain AMC99_RS01560 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMC99_RS01570 PF00561 alpha/beta hydrolase fold AMC99_RS01570 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AMC99_RS01575 PF00155 Aminotransferase class I and II AMC99_RS01595 PF00072 Response regulator receiver domain AMC99_RS01595 PF00486 Transcriptional regulatory protein, C terminal AMC99_RS01600 PF00378 Enoyl-CoA hydratase/isomerase AMC99_RS01620 PF13847 Methyltransferase domain AMC99_RS01620 PF03551 Transcriptional regulator PadR-like family AMC99_RS01625 PF02219 Methylenetetrahydrofolate reductase AMC99_RS01630 PF02310 B12 binding domain AMC99_RS01630 PF02607 B12 binding domain AMC99_RS01630 PF02574 Homocysteine S-methyltransferase AMC99_RS01630 PF00809 Pterin binding enzyme AMC99_RS01630 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMC99_RS01635 PF02310 B12 binding domain AMC99_RS01635 PF02574 Homocysteine S-methyltransferase AMC99_RS01635 PF02607 B12 binding domain AMC99_RS01635 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMC99_RS01635 PF00809 Pterin binding enzyme AMC99_RS01645 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMC99_RS01645 PF01571 Aminomethyltransferase folate-binding domain AMC99_RS01650 PF01597 Glycine cleavage H-protein AMC99_RS01655 PF02347 Glycine cleavage system P-protein AMC99_RS01660 PF00266 Aminotransferase class-V AMC99_RS01670 PF00378 Enoyl-CoA hydratase/isomerase AMC99_RS01675 PF00378 Enoyl-CoA hydratase/isomerase AMC99_RS01680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMC99_RS01685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS01685 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS01685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS01695 PF01042 Endoribonuclease L-PSP AMC99_RS01705 PF00356 Bacterial regulatory proteins, lacI family AMC99_RS01710 PF04055 Radical SAM superfamily AMC99_RS01730 PF05751 FixH AMC99_RS01735 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMC99_RS01735 PF12801 4Fe-4S binding domain AMC99_RS01735 PF13746 4Fe-4S dicluster domain AMC99_RS01740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMC99_RS01740 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AMC99_RS01755 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMC99_RS01760 PF13545 Crp-like helix-turn-helix domain AMC99_RS01760 PF00027 Cyclic nucleotide-binding domain AMC99_RS01775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS01775 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS01775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS01780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS01780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS01780 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS01785 PF00106 short chain dehydrogenase AMC99_RS01795 PF00210 Ferritin-like domain AMC99_RS01800 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMC99_RS01805 PF00293 NUDIX domain AMC99_RS01810 PF11799 impB/mucB/samB family C-terminal domain AMC99_RS01810 PF11798 IMS family HHH motif AMC99_RS01810 PF00817 impB/mucB/samB family AMC99_RS01820 PF01039 Carboxyl transferase domain AMC99_RS01830 PF00289 Biotin carboxylase, N-terminal domain AMC99_RS01830 PF18140 Propionyl-coenzyme A carboxylase BT domain AMC99_RS01830 PF02785 Biotin carboxylase C-terminal domain AMC99_RS01830 PF00364 Biotin-requiring enzyme AMC99_RS01830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMC99_RS01845 PF03641 Possible lysine decarboxylase AMC99_RS01850 PF01593 Flavin containing amine oxidoreductase AMC99_RS01885 PF03061 Thioesterase superfamily AMC99_RS01890 PF03060 Nitronate monooxygenase AMC99_RS01895 PF00743 Flavin-binding monooxygenase-like AMC99_RS01910 PF00440 Bacterial regulatory proteins, tetR family AMC99_RS01915 PF00743 Flavin-binding monooxygenase-like AMC99_RS01925 PF13667 ThiC-associated domain AMC99_RS01925 PF01964 Radical SAM ThiC family AMC99_RS01950 PF08212 Lipocalin-like domain AMC99_RS01955 PF00313 'Cold-shock' DNA-binding domain AMC99_RS01965 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMC99_RS01975 PF08274 PhnA Zinc-Ribbon AMC99_RS01975 PF03831 PhnA domain AMC99_RS02035 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMC99_RS02035 PF14602 Hexapeptide repeat of succinyl-transferase AMC99_RS02050 PF08240 Alcohol dehydrogenase GroES-like domain AMC99_RS02050 PF00107 Zinc-binding dehydrogenase AMC99_RS02055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS02055 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS02055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS02065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS02065 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS02065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS02070 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS02070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS02070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS02080 PF00625 Guanylate kinase AMC99_RS02095 PF00475 Imidazoleglycerol-phosphate dehydratase AMC99_RS02100 PF00117 Glutamine amidotransferase class-I AMC99_RS02105 PF00977 Histidine biosynthesis protein AMC99_RS02115 PF00977 Histidine biosynthesis protein AMC99_RS02120 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMC99_RS02125 PF01230 HIT domain AMC99_RS02130 PF03061 Thioesterase superfamily AMC99_RS02135 PF01618 MotA/TolQ/ExbB proton channel family AMC99_RS02140 PF02472 Biopolymer transport protein ExbD/TolR AMC99_RS02150 PF07676 WD40-like Beta Propeller Repeat AMC99_RS02150 PF04052 TolB amino-terminal domain AMC99_RS02155 PF00691 OmpA family AMC99_RS02165 PF01556 DnaJ C terminal domain AMC99_RS02165 PF00684 DnaJ central domain AMC99_RS02165 PF00226 DnaJ domain AMC99_RS02180 PF01053 Cys/Met metabolism PLP-dependent enzyme AMC99_RS02185 PF00939 Sodium:sulfate symporter transmembrane region AMC99_RS02190 PF00707 Translation initiation factor IF-3, C-terminal domain AMC99_RS02190 PF05198 Translation initiation factor IF-3, N-terminal domain AMC99_RS02200 PF01218 Coproporphyrinogen III oxidase AMC99_RS02210 PF01433 Peptidase family M1 domain AMC99_RS02220 PF04607 Region found in RelA / SpoT proteins AMC99_RS02220 PF13291 ACT domain AMC99_RS02220 PF02824 TGS domain AMC99_RS02230 PF00672 HAMP domain AMC99_RS02230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMC99_RS02230 PF12729 Four helix bundle sensory module for signal transduction AMC99_RS02295 PF00135 Carboxylesterase family AMC99_RS02300 PF07715 TonB-dependent Receptor Plug Domain AMC99_RS02300 PF00593 TonB dependent receptor AMC99_RS02305 PF00593 TonB dependent receptor AMC99_RS02305 PF07715 TonB-dependent Receptor Plug Domain AMC99_RS02310 PF00135 Carboxylesterase family AMC99_RS02315 PF07690 Major Facilitator Superfamily AMC99_RS02320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMC99_RS02320 PF00378 Enoyl-CoA hydratase/isomerase AMC99_RS02320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMC99_RS02325 PF00144 Beta-lactamase AMC99_RS02330 PF00108 Thiolase, N-terminal domain AMC99_RS02330 PF02803 Thiolase, C-terminal domain AMC99_RS02335 PF13193 AMP-binding enzyme C-terminal domain AMC99_RS02335 PF00501 AMP-binding enzyme AMC99_RS02340 PF17932 Tetracyclin repressor-like, C-terminal domain AMC99_RS02340 PF00440 Bacterial regulatory proteins, tetR family AMC99_RS02350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS02350 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS02350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS02355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS02355 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS02355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS02365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS02365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS02365 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS02375 PF00356 Bacterial regulatory proteins, lacI family AMC99_RS02390 PF00294 pfkB family carbohydrate kinase AMC99_RS02395 PF00135 Carboxylesterase family AMC99_RS02420 PF04616 Glycosyl hydrolases family 43 AMC99_RS02420 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMC99_RS02425 PF03480 Bacterial extracellular solute-binding protein, family 7 AMC99_RS02435 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMC99_RS02440 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AMC99_RS02440 PF08666 SAF domain AMC99_RS02445 PF02614 Glucuronate isomerase AMC99_RS02450 PF08125 Mannitol dehydrogenase C-terminal domain AMC99_RS02450 PF01232 Mannitol dehydrogenase Rossmann domain AMC99_RS02455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS02455 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS02455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS02470 PF00478 IMP dehydrogenase / GMP reductase domain AMC99_RS02470 PF00571 CBS domain AMC99_RS02475 PF00929 Exonuclease AMC99_RS02485 PF00474 Sodium:solute symporter family AMC99_RS02490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS02490 PF00512 His Kinase A (phospho-acceptor) domain AMC99_RS02490 PF09456 RcsC Alpha-Beta-Loop (ABL) AMC99_RS02490 PF00072 Response regulator receiver domain AMC99_RS02495 PF00196 Bacterial regulatory proteins, luxR family AMC99_RS02495 PF00072 Response regulator receiver domain AMC99_RS02500 PF13193 AMP-binding enzyme C-terminal domain AMC99_RS02500 PF00501 AMP-binding enzyme AMC99_RS02500 PF16177 Acetyl-coenzyme A synthetase N-terminus AMC99_RS02510 PF16177 Acetyl-coenzyme A synthetase N-terminus AMC99_RS02510 PF13193 AMP-binding enzyme C-terminal domain AMC99_RS02510 PF00501 AMP-binding enzyme AMC99_RS02530 PF02545 Maf-like protein AMC99_RS02535 PF01176 Translation initiation factor 1A / IF-1 AMC99_RS02545 PF00561 alpha/beta hydrolase fold AMC99_RS02550 PF06974 Protein of unknown function (DUF1298) AMC99_RS02550 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AMC99_RS02560 PF00072 Response regulator receiver domain AMC99_RS02560 PF00196 Bacterial regulatory proteins, luxR family AMC99_RS02565 PF01541 GIY-YIG catalytic domain AMC99_RS02565 PF08459 UvrC Helix-hairpin-helix N-terminal AMC99_RS02565 PF02151 UvrB/uvrC motif AMC99_RS02570 PF03880 DbpA RNA binding domain AMC99_RS02570 PF12343 Cold shock protein DEAD box A AMC99_RS02570 PF00270 DEAD/DEAH box helicase AMC99_RS02570 PF00271 Helicase conserved C-terminal domain AMC99_RS02595 PF03030 Inorganic H+ pyrophosphatase AMC99_RS02600 PF00586 AIR synthase related protein, N-terminal domain AMC99_RS02600 PF02769 AIR synthase related protein, C-terminal domain AMC99_RS02605 PF01029 NusB family AMC99_RS02610 PF00815 Histidinol dehydrogenase AMC99_RS02615 PF01634 ATP phosphoribosyltransferase AMC99_RS02630 PF05726 Pirin C-terminal cupin domain AMC99_RS02630 PF02678 Pirin AMC99_RS02635 PF01722 BolA-like protein AMC99_RS02640 PF00226 DnaJ domain AMC99_RS02660 PF07237 Protein of unknown function (DUF1428) AMC99_RS02670 PF01638 HxlR-like helix-turn-helix AMC99_RS02680 PF07728 AAA domain (dynein-related subfamily) AMC99_RS02680 PF12556 Cobaltochelatase CobS subunit N terminal AMC99_RS02680 PF08406 CbbQ/NirQ/NorQ C-terminal AMC99_RS02685 PF00905 Penicillin binding protein transpeptidase domain AMC99_RS02685 PF00912 Transglycosylase AMC99_RS02685 PF17092 Penicillin-binding protein OB-like domain AMC99_RS02710 PF03652 Holliday junction resolvase AMC99_RS02720 PF01594 AI-2E family transporter AMC99_RS02725 PF10502 Signal peptidase, peptidase S26 AMC99_RS02730 PF01648 4'-phosphopantetheinyl transferase superfamily AMC99_RS02735 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMC99_RS02740 PF00156 Phosphoribosyl transferase domain AMC99_RS02745 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMC99_RS02745 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMC99_RS02750 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMC99_RS02755 PF00561 alpha/beta hydrolase fold AMC99_RS02760 PF01040 UbiA prenyltransferase family AMC99_RS02770 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMC99_RS02775 PF00510 Cytochrome c oxidase subunit III AMC99_RS02790 PF14821 Threonine synthase N terminus AMC99_RS02790 PF00291 Pyridoxal-phosphate dependent enzyme AMC99_RS02810 PF06463 Molybdenum Cofactor Synthesis C AMC99_RS02810 PF04055 Radical SAM superfamily AMC99_RS02820 PF02391 MoaE protein AMC99_RS02825 PF13545 Crp-like helix-turn-helix domain AMC99_RS02825 PF00027 Cyclic nucleotide-binding domain AMC99_RS02835 PF00829 Ribosomal prokaryotic L21 protein AMC99_RS02840 PF01016 Ribosomal L27 protein AMC99_RS02845 PF13302 Acetyltransferase (GNAT) domain AMC99_RS02870 PF01979 Amidohydrolase family AMC99_RS02875 PF00892 EamA-like transporter family AMC99_RS02890 PF00171 Aldehyde dehydrogenase family AMC99_RS02895 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AMC99_RS02915 PF13360 PQQ-like domain AMC99_RS02925 PF03992 Antibiotic biosynthesis monooxygenase AMC99_RS02930 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMC99_RS02945 PF01040 UbiA prenyltransferase family AMC99_RS02960 PF09278 MerR, DNA binding AMC99_RS02960 PF00376 MerR family regulatory protein AMC99_RS02970 PF13307 Helicase C-terminal domain AMC99_RS02975 PF01053 Cys/Met metabolism PLP-dependent enzyme AMC99_RS02980 PF01037 Lrp/AsnC ligand binding domain AMC99_RS02985 PF00924 Mechanosensitive ion channel AMC99_RS02985 PF05552 Conserved TM helix AMC99_RS02990 PF00144 Beta-lactamase AMC99_RS03020 PF00313 'Cold-shock' DNA-binding domain AMC99_RS03030 PF01176 Translation initiation factor 1A / IF-1 AMC99_RS03040 PF01921 tRNA synthetases class I (K) AMC99_RS03065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMC99_RS03075 PF01022 Bacterial regulatory protein, arsR family AMC99_RS03085 PF12848 ABC transporter AMC99_RS03085 PF00005 ABC transporter AMC99_RS03090 PF00990 Diguanylate cyclase, GGDEF domain AMC99_RS03090 PF17151 Periplasmic sensor domain AMC99_RS03115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS03115 PF13188 PAS domain AMC99_RS03115 PF00512 His Kinase A (phospho-acceptor) domain AMC99_RS03115 PF00989 PAS fold AMC99_RS03120 PF01037 Lrp/AsnC ligand binding domain AMC99_RS03140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMC99_RS03140 PF02785 Biotin carboxylase C-terminal domain AMC99_RS03140 PF00289 Biotin carboxylase, N-terminal domain AMC99_RS03145 PF00364 Biotin-requiring enzyme AMC99_RS03150 PF01220 Dehydroquinase class II AMC99_RS03160 PF03328 HpcH/HpaI aldolase/citrate lyase family AMC99_RS03170 PF02699 Preprotein translocase subunit AMC99_RS03175 PF07549 SecD/SecF GG Motif AMC99_RS03175 PF02355 Protein export membrane protein AMC99_RS03180 PF02355 Protein export membrane protein AMC99_RS03180 PF07549 SecD/SecF GG Motif AMC99_RS03185 PF13579 Glycosyl transferase 4-like domain AMC99_RS03185 PF00534 Glycosyl transferases group 1 AMC99_RS03200 PF03167 Uracil DNA glycosylase superfamily AMC99_RS03205 PF16326 ABC transporter C-terminal domain AMC99_RS03205 PF00005 ABC transporter AMC99_RS03220 PF00486 Transcriptional regulatory protein, C terminal AMC99_RS03220 PF00072 Response regulator receiver domain AMC99_RS03225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS03235 PF02153 Prephenate dehydrogenase AMC99_RS03235 PF01817 Chorismate mutase type II AMC99_RS03240 PF00348 Polyprenyl synthetase AMC99_RS03245 PF00248 Aldo/keto reductase family AMC99_RS03250 PF00271 Helicase conserved C-terminal domain AMC99_RS03250 PF04408 Helicase associated domain (HA2) AMC99_RS03250 PF08482 ATP-dependent helicase C-terminal AMC99_RS03250 PF00270 DEAD/DEAH box helicase AMC99_RS03270 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AMC99_RS03270 PF12170 DNA polymerase III tau subunit V interacting with alpha AMC99_RS03270 PF12169 DNA polymerase III subunits gamma and tau domain III AMC99_RS03275 PF02575 YbaB/EbfC DNA-binding family AMC99_RS03285 PF00004 ATPase family associated with various cellular activities (AAA) AMC99_RS03285 PF05362 Lon protease (S16) C-terminal proteolytic domain AMC99_RS03285 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMC99_RS03290 PF00216 Bacterial DNA-binding protein AMC99_RS03300 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMC99_RS03300 PF00588 SpoU rRNA Methylase family AMC99_RS03310 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMC99_RS03310 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMC99_RS03320 PF02666 Phosphatidylserine decarboxylase AMC99_RS03325 PF01066 CDP-alcohol phosphatidyltransferase AMC99_RS03335 PF00318 Ribosomal protein S2 AMC99_RS03340 PF00889 Elongation factor TS AMC99_RS03345 PF00696 Amino acid kinase family AMC99_RS03350 PF01765 Ribosome recycling factor AMC99_RS03355 PF01255 Putative undecaprenyl diphosphate synthase AMC99_RS03365 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMC99_RS03365 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMC99_RS03365 PF13288 DXP reductoisomerase C-terminal domain AMC99_RS03370 PF17820 PDZ domain AMC99_RS03370 PF02163 Peptidase family M50 AMC99_RS03385 PF07977 FabA-like domain AMC99_RS03390 PF01197 Ribosomal protein L31 AMC99_RS03415 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMC99_RS03415 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMC99_RS03420 PF01578 Cytochrome C assembly protein AMC99_RS03425 PF03100 CcmE AMC99_RS03430 PF01578 Cytochrome C assembly protein AMC99_RS03430 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AMC99_RS03435 PF08534 Redoxin AMC99_RS03440 PF03918 Cytochrome C biogenesis protein AMC99_RS03450 PF02705 K+ potassium transporter AMC99_RS03460 PF04279 Intracellular septation protein A AMC99_RS03465 PF00448 SRP54-type protein, GTPase domain AMC99_RS03465 PF02881 SRP54-type protein, helical bundle domain AMC99_RS03470 PF04055 Radical SAM superfamily AMC99_RS03470 PF00919 Uncharacterized protein family UPF0004 AMC99_RS03475 PF01678 Diaminopimelate epimerase AMC99_RS03480 PF00563 EAL domain AMC99_RS03480 PF13188 PAS domain AMC99_RS03480 PF03707 Bacterial signalling protein N terminal repeat AMC99_RS03480 PF00990 Diguanylate cyclase, GGDEF domain AMC99_RS03500 PF01066 CDP-alcohol phosphatidyltransferase AMC99_RS03515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMC99_RS03515 PF03466 LysR substrate binding domain AMC99_RS03520 PF00570 HRDC domain AMC99_RS03520 PF01612 3'-5' exonuclease AMC99_RS03525 PF00152 tRNA synthetases class II (D, K and N) AMC99_RS03525 PF02938 GAD domain AMC99_RS03525 PF01336 OB-fold nucleic acid binding domain AMC99_RS03530 PF00550 Phosphopantetheine attachment site AMC99_RS03535 PF02801 Beta-ketoacyl synthase, C-terminal domain AMC99_RS03535 PF00109 Beta-ketoacyl synthase, N-terminal domain AMC99_RS03540 PF02618 YceG-like family AMC99_RS03570 PF01471 Putative peptidoglycan binding domain AMC99_RS03570 PF03734 L,D-transpeptidase catalytic domain AMC99_RS03575 PF00265 Thymidine kinase AMC99_RS03580 PF02163 Peptidase family M50 AMC99_RS03585 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AMC99_RS03585 PF01266 FAD dependent oxidoreductase AMC99_RS03590 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMC99_RS03590 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMC99_RS03595 PF00312 Ribosomal protein S15 AMC99_RS03600 PF00013 KH domain AMC99_RS03600 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMC99_RS03600 PF01138 3' exoribonuclease family, domain 1 AMC99_RS03600 PF03725 3' exoribonuclease family, domain 2 AMC99_RS03600 PF00575 S1 RNA binding domain AMC99_RS03625 PF01061 ABC-2 type transporter AMC99_RS03645 PF00378 Enoyl-CoA hydratase/isomerase AMC99_RS03660 PF00593 TonB dependent receptor AMC99_RS03660 PF07715 TonB-dependent Receptor Plug Domain AMC99_RS03690 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMC99_RS03695 PF00899 ThiF family AMC99_RS03695 PF00581 Rhodanese-like domain AMC99_RS03705 PF00873 AcrB/AcrD/AcrF family AMC99_RS03710 PF00085 Thioredoxin AMC99_RS03720 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMC99_RS03720 PF00578 AhpC/TSA family AMC99_RS03725 PF00753 Metallo-beta-lactamase superfamily AMC99_RS03740 PF00916 Sulfate permease family AMC99_RS03740 PF01740 STAS domain AMC99_RS03750 PF01022 Bacterial regulatory protein, arsR family AMC99_RS03755 PF01597 Glycine cleavage H-protein AMC99_RS03765 PF02754 Cysteine-rich domain AMC99_RS03780 PF04324 BFD-like [2Fe-2S] binding domain AMC99_RS03780 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMC99_RS03805 PF03099 Biotin/lipoate A/B protein ligase family AMC99_RS03820 PF00850 Histone deacetylase domain AMC99_RS03825 PF13686 DsrE/DsrF/DrsH-like family AMC99_RS03830 PF01206 Sulfurtransferase TusA AMC99_RS03840 PF00384 Molybdopterin oxidoreductase AMC99_RS03840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMC99_RS03840 PF01568 Molydopterin dinucleotide binding domain AMC99_RS03845 PF12800 4Fe-4S binding domain AMC99_RS03845 PF13247 4Fe-4S dicluster domain AMC99_RS03850 PF04976 DMSO reductase anchor subunit (DmsC) AMC99_RS03855 PF10609 NUBPL iron-transfer P-loop NTPase AMC99_RS03865 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMC99_RS03865 PF00578 AhpC/TSA family AMC99_RS03870 PF01654 Cytochrome bd terminal oxidase subunit I AMC99_RS03875 PF02322 Cytochrome bd terminal oxidase subunit II AMC99_RS03880 PF01575 MaoC like domain AMC99_RS03885 PF00171 Aldehyde dehydrogenase family AMC99_RS03890 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMC99_RS03890 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMC99_RS03895 PF00107 Zinc-binding dehydrogenase AMC99_RS03895 PF08240 Alcohol dehydrogenase GroES-like domain AMC99_RS03905 PF00756 Putative esterase AMC99_RS03915 PF02798 Glutathione S-transferase, N-terminal domain AMC99_RS03915 PF14497 Glutathione S-transferase, C-terminal domain AMC99_RS03920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS03920 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS03920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS03945 PF12450 von Willebrand factor AMC99_RS03945 PF12034 Domain of unknown function (DUF3520) AMC99_RS03945 PF00092 von Willebrand factor type A domain AMC99_RS03955 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMC99_RS03955 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMC99_RS03960 PF00814 Glycoprotease family AMC99_RS03965 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMC99_RS03965 PF03900 Porphobilinogen deaminase, C-terminal domain AMC99_RS03980 PF01494 FAD binding domain AMC99_RS03985 PF11412 Disulphide bond corrector protein DsbC AMC99_RS03985 PF02683 Cytochrome C biogenesis protein transmembrane region AMC99_RS03985 PF13098 Thioredoxin-like domain AMC99_RS03995 PF00271 Helicase conserved C-terminal domain AMC99_RS03995 PF04851 Type III restriction enzyme, res subunit AMC99_RS03995 PF02151 UvrB/uvrC motif AMC99_RS03995 PF12344 Ultra-violet resistance protein B AMC99_RS03995 PF17757 UvrB interaction domain AMC99_RS04005 PF08241 Methyltransferase domain AMC99_RS04005 PF12697 Alpha/beta hydrolase family AMC99_RS04010 PF14403 Circularly permuted ATP-grasp type 2 AMC99_RS04030 PF00196 Bacterial regulatory proteins, luxR family AMC99_RS04030 PF00072 Response regulator receiver domain AMC99_RS04040 PF01022 Bacterial regulatory protein, arsR family AMC99_RS04070 PF03144 Elongation factor Tu domain 2 AMC99_RS04070 PF00009 Elongation factor Tu GTP binding domain AMC99_RS04070 PF00679 Elongation factor G C-terminus AMC99_RS04075 PF00593 TonB dependent receptor AMC99_RS04075 PF07715 TonB-dependent Receptor Plug Domain AMC99_RS04080 PF05656 Protein of unknown function (DUF805) AMC99_RS04090 PF00005 ABC transporter AMC99_RS04095 PF13472 GDSL-like Lipase/Acylhydrolase family AMC99_RS04100 PF02463 RecF/RecN/SMC N terminal domain AMC99_RS04115 PF00293 NUDIX domain AMC99_RS04135 PF01741 Large-conductance mechanosensitive channel, MscL AMC99_RS04155 PF04996 Succinylarginine dihydrolase AMC99_RS04160 PF04958 Arginine N-succinyltransferase beta subunit AMC99_RS04165 PF07687 Peptidase dimerisation domain AMC99_RS04165 PF01546 Peptidase family M20/M25/M40 AMC99_RS04170 PF01274 Malate synthase AMC99_RS04180 PF00398 Ribosomal RNA adenine dimethylase AMC99_RS04185 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMC99_RS04190 PF09312 SurA N-terminal domain AMC99_RS04190 PF00639 PPIC-type PPIASE domain AMC99_RS04195 PF03968 OstA-like protein AMC99_RS04195 PF04453 LPS transport system D AMC99_RS04200 PF02789 Cytosol aminopeptidase family, N-terminal domain AMC99_RS04200 PF00883 Cytosol aminopeptidase family, catalytic domain AMC99_RS04215 PF00334 Nucleoside diphosphate kinase AMC99_RS04220 PF04191 Phospholipid methyltransferase AMC99_RS04230 PF00551 Formyl transferase AMC99_RS04235 PF02769 AIR synthase related protein, C-terminal domain AMC99_RS04235 PF00586 AIR synthase related protein, N-terminal domain AMC99_RS04250 PF00132 Bacterial transferase hexapeptide (six repeats) AMC99_RS04250 PF06426 Serine acetyltransferase, N-terminal AMC99_RS04260 PF00459 Inositol monophosphatase family AMC99_RS04270 PF00009 Elongation factor Tu GTP binding domain AMC99_RS04275 PF01507 Phosphoadenosine phosphosulfate reductase family AMC99_RS04280 PF02358 Trehalose-phosphatase AMC99_RS04285 PF00723 Glycosyl hydrolases family 15 AMC99_RS04290 PF00982 Glycosyltransferase family 20 AMC99_RS04295 PF00072 Response regulator receiver domain AMC99_RS04295 PF00486 Transcriptional regulatory protein, C terminal AMC99_RS04305 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMC99_RS04320 PF00291 Pyridoxal-phosphate dependent enzyme AMC99_RS04325 PF16653 Saccharopine dehydrogenase C-terminal domain AMC99_RS04325 PF03435 Saccharopine dehydrogenase NADP binding domain AMC99_RS04355 PF00881 Nitroreductase family AMC99_RS04360 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMC99_RS04370 PF00155 Aminotransferase class I and II AMC99_RS04375 PF01177 Asp/Glu/Hydantoin racemase AMC99_RS04380 PF02660 Glycerol-3-phosphate acyltransferase AMC99_RS04385 PF02481 DNA recombination-mediator protein A AMC99_RS04385 PF17782 DprA winged helix domain AMC99_RS04395 PF01131 DNA topoisomerase AMC99_RS04395 PF01751 Toprim domain AMC99_RS04395 PF13368 Topoisomerase C-terminal repeat AMC99_RS04395 PF01396 Topoisomerase DNA binding C4 zinc finger AMC99_RS04405 PF00072 Response regulator receiver domain AMC99_RS04420 PF01926 50S ribosome-binding GTPase AMC99_RS04420 PF07650 KH domain AMC99_RS04425 PF00035 Double-stranded RNA binding motif AMC99_RS04425 PF14622 Ribonuclease-III-like AMC99_RS04430 PF10502 Signal peptidase, peptidase S26 AMC99_RS04435 PF00342 Phosphoglucose isomerase AMC99_RS04445 PF00271 Helicase conserved C-terminal domain AMC99_RS04445 PF00270 DEAD/DEAH box helicase AMC99_RS04450 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMC99_RS04450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMC99_RS04455 PF01370 NAD dependent epimerase/dehydratase family AMC99_RS04460 PF09856 Predicted transcriptional regulator (DUF2083) AMC99_RS04460 PF06114 IrrE N-terminal-like domain AMC99_RS04460 PF01381 Helix-turn-helix AMC99_RS04465 PF01039 Carboxyl transferase domain AMC99_RS04480 PF00378 Enoyl-CoA hydratase/isomerase AMC99_RS04485 PF02798 Glutathione S-transferase, N-terminal domain AMC99_RS04485 PF00043 Glutathione S-transferase, C-terminal domain AMC99_RS04490 PF01642 Methylmalonyl-CoA mutase AMC99_RS04490 PF02310 B12 binding domain AMC99_RS04495 PF06968 Biotin and Thiamin Synthesis associated domain AMC99_RS04495 PF04055 Radical SAM superfamily AMC99_RS04505 PF02785 Biotin carboxylase C-terminal domain AMC99_RS04505 PF00289 Biotin carboxylase, N-terminal domain AMC99_RS04505 PF00364 Biotin-requiring enzyme AMC99_RS04505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMC99_RS04505 PF18140 Propionyl-coenzyme A carboxylase BT domain AMC99_RS04510 PF01588 Putative tRNA binding domain AMC99_RS04520 PF04199 Putative cyclase AMC99_RS04525 PF01761 3-dehydroquinate synthase AMC99_RS04530 PF01202 Shikimate kinase AMC99_RS04540 PF00589 Phage integrase family AMC99_RS04540 PF02899 Phage integrase, N-terminal SAM-like domain AMC99_RS04545 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMC99_RS04565 PF00293 NUDIX domain AMC99_RS04580 PF13091 PLD-like domain AMC99_RS04580 PF13396 Phospholipase_D-nuclease N-terminal AMC99_RS04585 PF01227 GTP cyclohydrolase I AMC99_RS04595 PF08534 Redoxin AMC99_RS04595 PF00462 Glutaredoxin AMC99_RS04600 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMC99_RS04600 PF05221 S-adenosyl-L-homocysteine hydrolase AMC99_RS04605 PF00512 His Kinase A (phospho-acceptor) domain AMC99_RS04605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS04610 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMC99_RS04615 PF01636 Phosphotransferase enzyme family AMC99_RS04620 PF12804 MobA-like NTP transferase domain AMC99_RS04625 PF12705 PD-(D/E)XK nuclease superfamily AMC99_RS04630 PF13361 UvrD-like helicase C-terminal domain AMC99_RS04630 PF00580 UvrD/REP helicase N-terminal domain AMC99_RS04630 PF12705 PD-(D/E)XK nuclease superfamily AMC99_RS04635 PF00085 Thioredoxin AMC99_RS04640 PF00459 Inositol monophosphatase family AMC99_RS04645 PF01960 ArgJ family AMC99_RS04660 PF01043 SecA preprotein cross-linking domain AMC99_RS04660 PF02810 SEC-C motif AMC99_RS04660 PF07517 SecA DEAD-like domain AMC99_RS04660 PF07516 SecA Wing and Scaffold domain AMC99_RS04675 PF01513 ATP-NAD kinase AMC99_RS04680 PF00360 Phytochrome region AMC99_RS04680 PF00990 Diguanylate cyclase, GGDEF domain AMC99_RS04680 PF01590 GAF domain AMC99_RS04680 PF00563 EAL domain AMC99_RS04685 PF02559 CarD-like/TRCF domain AMC99_RS04685 PF00270 DEAD/DEAH box helicase AMC99_RS04685 PF00271 Helicase conserved C-terminal domain AMC99_RS04685 PF17757 UvrB interaction domain AMC99_RS04685 PF03461 TRCF domain AMC99_RS04700 PF17191 RecG wedge domain AMC99_RS04700 PF00271 Helicase conserved C-terminal domain AMC99_RS04700 PF00270 DEAD/DEAH box helicase AMC99_RS04705 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMC99_RS04710 PF01679 Proteolipid membrane potential modulator AMC99_RS04725 PF00303 Thymidylate synthase AMC99_RS04730 PF00676 Dehydrogenase E1 component AMC99_RS04730 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal AMC99_RS04735 PF02780 Transketolase, C-terminal domain AMC99_RS04735 PF02779 Transketolase, pyrimidine binding domain AMC99_RS04740 PF02817 e3 binding domain AMC99_RS04740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMC99_RS04740 PF00364 Biotin-requiring enzyme AMC99_RS04755 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMC99_RS04770 PF02779 Transketolase, pyrimidine binding domain AMC99_RS04770 PF02780 Transketolase, C-terminal domain AMC99_RS04770 PF00456 Transketolase, thiamine diphosphate binding domain AMC99_RS04775 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMC99_RS04775 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMC99_RS04780 PF00162 Phosphoglycerate kinase AMC99_RS04790 PF00274 Fructose-bisphosphate aldolase class-I AMC99_RS04805 PF02581 Thiamine monophosphate synthase AMC99_RS04810 PF01476 LysM domain AMC99_RS04810 PF03734 L,D-transpeptidase catalytic domain AMC99_RS04815 PF01551 Peptidase family M23 AMC99_RS04815 PF01476 LysM domain AMC99_RS04825 PF09285 Elongation factor P, C-terminal AMC99_RS04825 PF08207 Elongation factor P (EF-P) KOW-like domain AMC99_RS04825 PF01132 Elongation factor P (EF-P) OB domain AMC99_RS04835 PF00459 Inositol monophosphatase family AMC99_RS04845 PF12794 Mechanosensitive ion channel inner membrane domain 1 AMC99_RS04845 PF12795 Mechanosensitive ion channel porin domain AMC99_RS04845 PF00924 Mechanosensitive ion channel AMC99_RS04850 PF03600 Citrate transporter AMC99_RS04850 PF02080 TrkA-C domain AMC99_RS04855 PF00463 Isocitrate lyase family AMC99_RS04860 PF06114 IrrE N-terminal-like domain AMC99_RS04860 PF09856 Predicted transcriptional regulator (DUF2083) AMC99_RS04860 PF01381 Helix-turn-helix AMC99_RS04870 PF02397 Bacterial sugar transferase AMC99_RS04875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS04875 PF00989 PAS fold AMC99_RS04875 PF00512 His Kinase A (phospho-acceptor) domain AMC99_RS04880 PF02954 Bacterial regulatory protein, Fis family AMC99_RS04880 PF00158 Sigma-54 interaction domain AMC99_RS04880 PF00072 Response regulator receiver domain AMC99_RS04890 PF13593 SBF-like CPA transporter family (DUF4137) AMC99_RS04900 PF02548 Ketopantoate hydroxymethyltransferase AMC99_RS04905 PF00209 Sodium:neurotransmitter symporter family AMC99_RS04935 PF03167 Uracil DNA glycosylase superfamily AMC99_RS04940 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMC99_RS04940 PF14579 Helix-hairpin-helix motif AMC99_RS04940 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMC99_RS04940 PF01336 OB-fold nucleic acid binding domain AMC99_RS04940 PF02811 PHP domain AMC99_RS04950 PF07690 Major Facilitator Superfamily AMC99_RS04955 PF00072 Response regulator receiver domain AMC99_RS04955 PF00486 Transcriptional regulatory protein, C terminal AMC99_RS04960 PF01895 PhoU domain AMC99_RS04965 PF00005 ABC transporter AMC99_RS04970 PF00528 Binding-protein-dependent transport system inner membrane component AMC99_RS04975 PF00528 Binding-protein-dependent transport system inner membrane component AMC99_RS04985 PF07396 Phosphate-selective porin O and P AMC99_RS04990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS04990 PF00512 His Kinase A (phospho-acceptor) domain AMC99_RS04990 PF00989 PAS fold AMC99_RS04990 PF11808 Phosphate regulon sensor protein PhoR AMC99_RS05000 PF17768 RecJ OB domain AMC99_RS05000 PF01368 DHH family AMC99_RS05000 PF02272 DHHA1 domain AMC99_RS05000 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AMC99_RS05035 PF00682 HMGL-like AMC99_RS05035 PF08502 LeuA allosteric (dimerisation) domain AMC99_RS05045 PF06441 Epoxide hydrolase N terminus AMC99_RS05050 PF01070 FMN-dependent dehydrogenase AMC99_RS05060 PF04264 YceI-like domain AMC99_RS05065 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMC99_RS05065 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMC99_RS05070 PF10369 Small subunit of acetolactate synthase AMC99_RS05075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMC99_RS05075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMC99_RS05075 PF00205 Thiamine pyrophosphate enzyme, central domain AMC99_RS05085 PF18429 Domain of unknown function (DUF5609) AMC99_RS05100 PF00586 AIR synthase related protein, N-terminal domain AMC99_RS05100 PF02769 AIR synthase related protein, C-terminal domain AMC99_RS05100 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMC99_RS05115 PF02609 Exonuclease VII small subunit AMC99_RS05120 PF00348 Polyprenyl synthetase AMC99_RS05125 PF01467 Cytidylyltransferase-like AMC99_RS05130 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMC99_RS05135 PF02547 Queuosine biosynthesis protein AMC99_RS05140 PF00005 ABC transporter AMC99_RS05145 PF01061 ABC-2 type transporter AMC99_RS05155 PF01702 Queuine tRNA-ribosyltransferase AMC99_RS05175 PF01479 S4 domain AMC99_RS05175 PF00163 Ribosomal protein S4/S9 N-terminal domain AMC99_RS05185 PF00588 SpoU rRNA Methylase family AMC99_RS05190 PF03477 ATP cone domain AMC99_RS05200 PF00464 Serine hydroxymethyltransferase AMC99_RS05205 PF02502 Ribose/Galactose Isomerase AMC99_RS05210 PF04539 Sigma-70 region 3 AMC99_RS05210 PF04545 Sigma-70, region 4 AMC99_RS05210 PF00140 Sigma-70 factor, region 1.2 AMC99_RS05210 PF03979 Sigma-70 factor, region 1.1 AMC99_RS05210 PF04546 Sigma-70, non-essential region AMC99_RS05210 PF04542 Sigma-70 region 2 AMC99_RS05215 PF08278 DNA primase DnaG DnaB-binding AMC99_RS05215 PF10410 DnaB-helicase binding domain of primase AMC99_RS05215 PF01807 CHC2 zinc finger AMC99_RS05215 PF08275 DNA primase catalytic core, N-terminal domain AMC99_RS05230 PF00117 Glutamine amidotransferase class-I AMC99_RS05230 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMC99_RS05240 PF02142 MGS-like domain AMC99_RS05240 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMC99_RS05240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMC99_RS05245 PF03449 Transcription elongation factor, N-terminal AMC99_RS05245 PF01272 Transcription elongation factor, GreA/GreB, C-term AMC99_RS05280 PF00113 Enolase, C-terminal TIM barrel domain AMC99_RS05280 PF03952 Enolase, N-terminal domain AMC99_RS05295 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMC99_RS05300 PF00925 GTP cyclohydrolase II AMC99_RS05300 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMC99_RS05315 PF01098 Cell cycle protein AMC99_RS05320 PF03717 Penicillin-binding Protein dimerisation domain AMC99_RS05320 PF00905 Penicillin binding protein transpeptidase domain AMC99_RS05330 PF04085 rod shape-determining protein MreC AMC99_RS05340 PF08676 MutL C terminal dimerisation domain AMC99_RS05340 PF01119 DNA mismatch repair protein, C-terminal domain AMC99_RS05360 PF01926 50S ribosome-binding GTPase AMC99_RS05360 PF06071 Protein of unknown function (DUF933) AMC99_RS05365 PF00106 short chain dehydrogenase AMC99_RS05370 PF01195 Peptidyl-tRNA hydrolase AMC99_RS05375 PF01386 Ribosomal L25p family AMC99_RS05375 PF14693 Ribosomal protein TL5, C-terminal domain AMC99_RS05400 PF02091 Glycyl-tRNA synthetase alpha subunit AMC99_RS05405 PF02092 Glycyl-tRNA synthetase beta subunit AMC99_RS05405 PF05746 DALR anticodon binding domain AMC99_RS05410 PF00391 PEP-utilising enzyme, mobile domain AMC99_RS05410 PF02896 PEP-utilising enzyme, TIM barrel domain AMC99_RS05410 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMC99_RS05425 PF01502 Phosphoribosyl-AMP cyclohydrolase AMC99_RS05430 PF13411 MerR HTH family regulatory protein AMC99_RS05435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS05435 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS05435 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMC99_RS05435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS05450 PF00291 Pyridoxal-phosphate dependent enzyme AMC99_RS05465 PF01479 S4 domain AMC99_RS05465 PF00579 tRNA synthetases class I (W and Y) AMC99_RS05475 PF07075 Protein of unknown function (DUF1343) AMC99_RS05480 PF01321 Creatinase/Prolidase N-terminal domain AMC99_RS05480 PF00557 Metallopeptidase family M24 AMC99_RS05495 PF12729 Four helix bundle sensory module for signal transduction AMC99_RS05495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMC99_RS05495 PF00672 HAMP domain AMC99_RS05500 PF12729 Four helix bundle sensory module for signal transduction AMC99_RS05500 PF00672 HAMP domain AMC99_RS05500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMC99_RS05505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMC99_RS05505 PF12729 Four helix bundle sensory module for signal transduction AMC99_RS05505 PF00672 HAMP domain AMC99_RS05510 PF17862 AAA+ lid domain AMC99_RS05510 PF00004 ATPase family associated with various cellular activities (AAA) AMC99_RS05510 PF01434 Peptidase family M41 AMC99_RS05535 PF00204 DNA gyrase B AMC99_RS05535 PF00986 DNA gyrase B subunit, carboxyl terminus AMC99_RS05535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS05535 PF01751 Toprim domain AMC99_RS05545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMC99_RS05550 PF02021 Uncharacterised protein family UPF0102 AMC99_RS05555 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMC99_RS05555 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMC99_RS05560 PF09335 SNARE associated Golgi protein AMC99_RS05565 PF00589 Phage integrase family AMC99_RS05565 PF02899 Phage integrase, N-terminal SAM-like domain AMC99_RS05570 PF06969 HemN C-terminal domain AMC99_RS05570 PF04055 Radical SAM superfamily AMC99_RS05580 PF01725 Ham1 family AMC99_RS05585 PF03725 3' exoribonuclease family, domain 2 AMC99_RS05585 PF01138 3' exoribonuclease family, domain 1 AMC99_RS05590 PF01628 HrcA protein C terminal domain AMC99_RS05595 PF01025 GrpE AMC99_RS05620 PF00012 Hsp70 protein AMC99_RS05625 PF00226 DnaJ domain AMC99_RS05625 PF01556 DnaJ C terminal domain AMC99_RS05625 PF00684 DnaJ central domain AMC99_RS05635 PF11856 Protein of unknown function (DUF3376) AMC99_RS05635 PF01734 Patatin-like phospholipase AMC99_RS05640 PF18073 Rubredoxin metal binding domain AMC99_RS05640 PF06745 KaiC AMC99_RS05655 PF00083 Sugar (and other) transporter AMC99_RS05655 PF08946 Osmosensory transporter coiled coil AMC99_RS05660 PF01168 Alanine racemase, N-terminal domain AMC99_RS05660 PF00842 Alanine racemase, C-terminal domain AMC99_RS05665 PF07879 PHB/PHA accumulation regulator DNA-binding domain AMC99_RS05665 PF05233 PHB accumulation regulatory domain AMC99_RS05670 PF03129 Anticodon binding domain AMC99_RS05670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMC99_RS05675 PF00773 RNB domain AMC99_RS05675 PF00575 S1 RNA binding domain AMC99_RS05675 PF17876 Cold shock domain AMC99_RS05675 PF08206 Ribonuclease B OB domain AMC99_RS05675 PF08461 Ribonuclease R winged-helix domain AMC99_RS05685 PF02817 e3 binding domain AMC99_RS05685 PF00364 Biotin-requiring enzyme AMC99_RS05685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMC99_RS05705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMC99_RS05705 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMC99_RS05710 PF02254 TrkA-N domain AMC99_RS05710 PF00999 Sodium/hydrogen exchanger family AMC99_RS05720 PF13406 Transglycosylase SLT domain AMC99_RS05725 PF05036 Sporulation related domain AMC99_RS05725 PF03330 Lytic transglycolase AMC99_RS05730 PF00768 D-alanyl-D-alanine carboxypeptidase AMC99_RS05730 PF07943 Penicillin-binding protein 5, C-terminal domain AMC99_RS05735 PF02223 Thymidylate kinase AMC99_RS05740 PF09115 DNA polymerase III, delta subunit, C terminal AMC99_RS05745 PF09334 tRNA synthetases class I (M) AMC99_RS05750 PF01026 TatD related DNase AMC99_RS05755 PF12706 Beta-lactamase superfamily domain AMC99_RS05755 PF03099 Biotin/lipoate A/B protein ligase family AMC99_RS05760 PF03819 MazG nucleotide pyrophosphohydrolase domain AMC99_RS05765 PF13167 GTP-binding GTPase N-terminal AMC99_RS05765 PF16360 GTP-binding GTPase Middle Region AMC99_RS05765 PF01926 50S ribosome-binding GTPase AMC99_RS05770 PF17209 Hfq protein AMC99_RS05775 PF02954 Bacterial regulatory protein, Fis family AMC99_RS05775 PF00158 Sigma-54 interaction domain AMC99_RS05775 PF00072 Response regulator receiver domain AMC99_RS05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS05780 PF00672 HAMP domain AMC99_RS05785 PF02954 Bacterial regulatory protein, Fis family AMC99_RS05785 PF00158 Sigma-54 interaction domain AMC99_RS05785 PF00072 Response regulator receiver domain AMC99_RS05790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS05790 PF00512 His Kinase A (phospho-acceptor) domain AMC99_RS05790 PF00989 PAS fold AMC99_RS05795 PF01207 Dihydrouridine synthase (Dus) AMC99_RS05800 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMC99_RS05800 PF02542 YgbB family AMC99_RS05805 PF02464 Competence-damaged protein AMC99_RS05810 PF03364 Polyketide cyclase / dehydrase and lipid transport AMC99_RS05815 PF04055 Radical SAM superfamily AMC99_RS05815 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AMC99_RS05820 PF00484 Carbonic anhydrase AMC99_RS05835 PF00521 DNA gyrase/topoisomerase IV, subunit A AMC99_RS05835 PF03989 DNA gyrase C-terminal domain, beta-propeller AMC99_RS05850 PF01134 Glucose inhibited division protein A AMC99_RS05880 PF02779 Transketolase, pyrimidine binding domain AMC99_RS05880 PF02780 Transketolase, C-terminal domain AMC99_RS05880 PF00364 Biotin-requiring enzyme AMC99_RS05885 PF00676 Dehydrogenase E1 component AMC99_RS05895 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS05895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS05895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS05900 PF00924 Mechanosensitive ion channel AMC99_RS05900 PF05552 Conserved TM helix AMC99_RS05905 PF07690 Major Facilitator Superfamily AMC99_RS05920 PF00795 Carbon-nitrogen hydrolase AMC99_RS05925 PF00462 Glutaredoxin AMC99_RS05930 PF00011 Hsp20/alpha crystallin family AMC99_RS05935 PF00117 Glutamine amidotransferase class-I AMC99_RS05935 PF06418 CTP synthase N-terminus AMC99_RS05945 PF00121 Triosephosphate isomerase AMC99_RS05955 PF00425 chorismate binding enzyme AMC99_RS05955 PF04715 Anthranilate synthase component I, N terminal region AMC99_RS05965 PF00561 alpha/beta hydrolase fold AMC99_RS05970 PF00117 Glutamine amidotransferase class-I AMC99_RS05975 PF00591 Glycosyl transferase family, a/b domain AMC99_RS05975 PF02885 Glycosyl transferase family, helical bundle domain AMC99_RS05980 PF00218 Indole-3-glycerol phosphate synthase AMC99_RS05985 PF01967 MoaC family AMC99_RS05990 PF03454 MoeA C-terminal region (domain IV) AMC99_RS05990 PF00994 Probable molybdopterin binding domain AMC99_RS05990 PF03453 MoeA N-terminal region (domain I and II) AMC99_RS05995 PF00717 Peptidase S24-like AMC99_RS05995 PF01726 LexA DNA binding domain AMC99_RS06000 PF00753 Metallo-beta-lactamase superfamily AMC99_RS06000 PF03772 Competence protein AMC99_RS06005 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMC99_RS06010 PF00285 Citrate synthase, C-terminal domain AMC99_RS06020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS06020 PF00512 His Kinase A (phospho-acceptor) domain AMC99_RS06050 PF12706 Beta-lactamase superfamily domain AMC99_RS06050 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMC99_RS06050 PF17770 Ribonuclease J C-terminal domain AMC99_RS06055 PF03309 Type III pantothenate kinase AMC99_RS06065 PF00361 Proton-conducting membrane transporter AMC99_RS06070 PF00361 Proton-conducting membrane transporter AMC99_RS06070 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AMC99_RS06075 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMC99_RS06075 PF00361 Proton-conducting membrane transporter AMC99_RS06080 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMC99_RS06085 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMC99_RS06090 PF12838 4Fe-4S dicluster domain AMC99_RS06095 PF00146 NADH dehydrogenase AMC99_RS06100 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AMC99_RS06100 PF00384 Molybdopterin oxidoreductase AMC99_RS06100 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMC99_RS06110 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMC99_RS06110 PF10531 SLBB domain AMC99_RS06110 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMC99_RS06125 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMC99_RS06130 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMC99_RS06135 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMC99_RS06140 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMC99_RS06145 PF00171 Aldehyde dehydrogenase family AMC99_RS06150 PF02803 Thiolase, C-terminal domain AMC99_RS06150 PF00108 Thiolase, N-terminal domain AMC99_RS06170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMC99_RS06170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMC99_RS06175 PF00909 Ammonium Transporter Family AMC99_RS06200 PF00472 RF-1 domain AMC99_RS06200 PF03462 PCRF domain AMC99_RS06205 PF00578 AhpC/TSA family AMC99_RS06210 PF00912 Transglycosylase AMC99_RS06210 PF17092 Penicillin-binding protein OB-like domain AMC99_RS06210 PF00905 Penicillin binding protein transpeptidase domain AMC99_RS06215 PF01520 N-acetylmuramoyl-L-alanine amidase AMC99_RS06215 PF11741 AMIN domain AMC99_RS06220 PF10150 Ribonuclease E/G family AMC99_RS06220 PF00575 S1 RNA binding domain AMC99_RS06220 PF12111 Polyribonucleotide phosphorylase C terminal AMC99_RS06225 PF01209 ubiE/COQ5 methyltransferase family AMC99_RS06245 PF00483 Nucleotidyl transferase AMC99_RS06250 PF01943 Polysaccharide biosynthesis protein AMC99_RS06260 PF13085 2Fe-2S iron-sulfur cluster binding domain AMC99_RS06270 PF03969 AFG1-like ATPase AMC99_RS06275 PF02678 Pirin AMC99_RS06275 PF17954 Quercetinase C-terminal cupin domain AMC99_RS06280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMC99_RS06280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMC99_RS06280 PF00378 Enoyl-CoA hydratase/isomerase AMC99_RS06285 PF00733 Asparagine synthase AMC99_RS06285 PF13537 Glutamine amidotransferase domain AMC99_RS06305 PF01522 Polysaccharide deacetylase AMC99_RS06310 PF01471 Putative peptidoglycan binding domain AMC99_RS06310 PF13401 AAA domain AMC99_RS06335 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMC99_RS06335 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMC99_RS06340 PF00501 AMP-binding enzyme AMC99_RS06340 PF13193 AMP-binding enzyme C-terminal domain AMC99_RS06340 PF00668 Condensation domain AMC99_RS06340 PF00550 Phosphopantetheine attachment site AMC99_RS06365 PF05958 tRNA (Uracil-5-)-methyltransferase AMC99_RS06370 PF01256 Carbohydrate kinase AMC99_RS06370 PF03853 YjeF-related protein N-terminus AMC99_RS06380 PF00920 Dehydratase family AMC99_RS06390 PF00288 GHMP kinases N terminal domain AMC99_RS06390 PF08544 GHMP kinases C terminal AMC99_RS06410 PF00994 Probable molybdopterin binding domain AMC99_RS06440 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMC99_RS06440 PF02811 PHP domain AMC99_RS06440 PF14579 Helix-hairpin-helix motif AMC99_RS06440 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMC99_RS06445 PF04235 Protein of unknown function (DUF418) AMC99_RS06450 PF00255 Glutathione peroxidase AMC99_RS06460 PF00005 ABC transporter AMC99_RS06465 PF12704 MacB-like periplasmic core domain AMC99_RS06465 PF02687 FtsX-like permease family AMC99_RS06470 PF00156 Phosphoribosyl transferase domain AMC99_RS06470 PF13537 Glutamine amidotransferase domain AMC99_RS06475 PF00106 short chain dehydrogenase AMC99_RS06485 PF00144 Beta-lactamase AMC99_RS06495 PF03441 FAD binding domain of DNA photolyase AMC99_RS06495 PF00875 DNA photolyase AMC99_RS06505 PF01569 PAP2 superfamily AMC99_RS06510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMC99_RS06515 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AMC99_RS06515 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMC99_RS06515 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMC99_RS06520 PF07859 alpha/beta hydrolase fold AMC99_RS06525 PF00293 NUDIX domain AMC99_RS06535 PF01189 16S rRNA methyltransferase RsmB/F AMC99_RS06535 PF01029 NusB family AMC99_RS06540 PF00571 CBS domain AMC99_RS06540 PF00478 IMP dehydrogenase / GMP reductase domain AMC99_RS06555 PF04228 Putative neutral zinc metallopeptidase AMC99_RS06565 PF06123 Inner membrane protein CreD AMC99_RS06575 PF03965 Penicillinase repressor AMC99_RS06580 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMC99_RS06595 PF00890 FAD binding domain AMC99_RS06595 PF02910 Fumarate reductase flavoprotein C-term AMC99_RS06600 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMC99_RS06605 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMC99_RS06615 PF00753 Metallo-beta-lactamase superfamily AMC99_RS06625 PF00378 Enoyl-CoA hydratase/isomerase AMC99_RS06630 PF02464 Competence-damaged protein AMC99_RS06630 PF00994 Probable molybdopterin binding domain AMC99_RS06635 PF12826 Helix-hairpin-helix motif AMC99_RS06635 PF00533 BRCA1 C Terminus (BRCT) domain AMC99_RS06635 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMC99_RS06635 PF03120 NAD-dependent DNA ligase OB-fold domain AMC99_RS06635 PF01653 NAD-dependent DNA ligase adenylation domain AMC99_RS06645 PF13476 AAA domain AMC99_RS06645 PF02463 RecF/RecN/SMC N terminal domain AMC99_RS06650 PF13525 Outer membrane lipoprotein AMC99_RS06695 PF00679 Elongation factor G C-terminus AMC99_RS06695 PF06421 GTP-binding protein LepA C-terminus AMC99_RS06695 PF00009 Elongation factor Tu GTP binding domain AMC99_RS06700 PF00563 EAL domain AMC99_RS06700 PF00990 Diguanylate cyclase, GGDEF domain AMC99_RS06700 PF08447 PAS fold AMC99_RS06700 PF08448 PAS fold AMC99_RS06705 PF13188 PAS domain AMC99_RS06705 PF03707 Bacterial signalling protein N terminal repeat AMC99_RS06705 PF00563 EAL domain AMC99_RS06705 PF00990 Diguanylate cyclase, GGDEF domain AMC99_RS06710 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AMC99_RS06715 PF00561 alpha/beta hydrolase fold AMC99_RS06720 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMC99_RS06730 PF00561 alpha/beta hydrolase fold AMC99_RS06735 PF07969 Amidohydrolase family AMC99_RS06740 PF00107 Zinc-binding dehydrogenase AMC99_RS06740 PF08240 Alcohol dehydrogenase GroES-like domain AMC99_RS06750 PF00712 DNA polymerase III beta subunit, N-terminal domain AMC99_RS06750 PF02767 DNA polymerase III beta subunit, central domain AMC99_RS06750 PF02768 DNA polymerase III beta subunit, C-terminal domain AMC99_RS06765 PF00698 Acyl transferase domain AMC99_RS06770 PF02016 LD-carboxypeptidase N-terminal domain AMC99_RS06770 PF17676 LD-carboxypeptidase C-terminal domain AMC99_RS06775 PF01225 Mur ligase family, catalytic domain AMC99_RS06775 PF08245 Mur ligase middle domain AMC99_RS06775 PF02875 Mur ligase family, glutamate ligase domain AMC99_RS06785 PF05661 Protein of unknown function (DUF808) AMC99_RS06790 PF01250 Ribosomal protein S6 AMC99_RS06795 PF01084 Ribosomal protein S18 AMC99_RS06800 PF03948 Ribosomal protein L9, C-terminal domain AMC99_RS06800 PF01281 Ribosomal protein L9, N-terminal domain AMC99_RS06810 PF01048 Phosphorylase superfamily AMC99_RS06810 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AMC99_RS06820 PF13426 PAS domain AMC99_RS06820 PF13581 Histidine kinase-like ATPase domain AMC99_RS06820 PF07536 HWE histidine kinase AMC99_RS06825 PF18030 RimK PreATP-grasp domain AMC99_RS06825 PF08443 RimK-like ATP-grasp domain AMC99_RS06830 PF18030 RimK PreATP-grasp domain AMC99_RS06830 PF08443 RimK-like ATP-grasp domain AMC99_RS06865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMC99_RS06865 PF00529 HlyD membrane-fusion protein of T1SS AMC99_RS06870 PF07690 Major Facilitator Superfamily AMC99_RS06880 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMC99_RS06880 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMC99_RS06885 PF00326 Prolyl oligopeptidase family AMC99_RS06885 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMC99_RS06890 PF01245 Ribosomal protein L19 AMC99_RS06895 PF01746 tRNA (Guanine-1)-methyltransferase AMC99_RS06900 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMC99_RS06910 PF01782 RimM N-terminal domain AMC99_RS06910 PF05239 PRC-barrel domain AMC99_RS06915 PF00886 Ribosomal protein S16 AMC99_RS06920 PF00448 SRP54-type protein, GTPase domain AMC99_RS06920 PF02881 SRP54-type protein, helical bundle domain AMC99_RS06920 PF02978 Signal peptide binding domain AMC99_RS06935 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMC99_RS06945 PF02224 Cytidylate kinase AMC99_RS06950 PF09997 Predicted membrane protein (DUF2238) AMC99_RS06955 PF00575 S1 RNA binding domain AMC99_RS06960 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMC99_RS06960 PF00753 Metallo-beta-lactamase superfamily AMC99_RS06965 PF00698 Acyl transferase domain AMC99_RS06965 PF14765 Polyketide synthase dehydratase AMC99_RS06965 PF00550 Phosphopantetheine attachment site AMC99_RS06965 PF08659 KR domain AMC99_RS06965 PF08240 Alcohol dehydrogenase GroES-like domain AMC99_RS06970 PF00430 ATP synthase B/B' CF(0) AMC99_RS06975 PF00430 ATP synthase B/B' CF(0) AMC99_RS06980 PF00137 ATP synthase subunit C AMC99_RS06985 PF00119 ATP synthase A chain AMC99_RS07010 PF04002 RadC-like JAB domain AMC99_RS07015 PF10397 Adenylosuccinate lyase C-terminus AMC99_RS07015 PF00206 Lyase AMC99_RS07025 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMC99_RS07030 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMC99_RS07035 PF00291 Pyridoxal-phosphate dependent enzyme AMC99_RS07045 PF00290 Tryptophan synthase alpha chain AMC99_RS07050 PF17848 Acetyl-coA carboxylase zinc finger domain AMC99_RS07050 PF01039 Carboxyl transferase domain AMC99_RS07055 PF08245 Mur ligase middle domain AMC99_RS07055 PF02875 Mur ligase family, glutamate ligase domain AMC99_RS07060 PF07690 Major Facilitator Superfamily AMC99_RS07065 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AMC99_RS07065 PF00355 Rieske [2Fe-2S] domain AMC99_RS07070 PF00849 RNA pseudouridylate synthase AMC99_RS07070 PF01479 S4 domain AMC99_RS07085 PF13361 UvrD-like helicase C-terminal domain AMC99_RS07085 PF00580 UvrD/REP helicase N-terminal domain AMC99_RS07090 PF00270 DEAD/DEAH box helicase AMC99_RS07090 PF00271 Helicase conserved C-terminal domain AMC99_RS07100 PF02913 FAD linked oxidases, C-terminal domain AMC99_RS07100 PF01565 FAD binding domain AMC99_RS07115 PF00072 Response regulator receiver domain AMC99_RS07125 PF00180 Isocitrate/isopropylmalate dehydrogenase AMC99_RS07130 PF00795 Carbon-nitrogen hydrolase AMC99_RS07130 PF00583 Acetyltransferase (GNAT) family AMC99_RS07135 PF00474 Sodium:solute symporter family AMC99_RS07140 PF00999 Sodium/hydrogen exchanger family AMC99_RS07140 PF02254 TrkA-N domain AMC99_RS07145 PF01411 tRNA synthetases class II (A) AMC99_RS07145 PF02272 DHHA1 domain AMC99_RS07145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMC99_RS07150 PF13649 Methyltransferase domain AMC99_RS07155 PF00154 recA bacterial DNA recombination protein AMC99_RS07160 PF00072 Response regulator receiver domain AMC99_RS07160 PF13188 PAS domain AMC99_RS07160 PF00512 His Kinase A (phospho-acceptor) domain AMC99_RS07160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS07160 PF08448 PAS fold AMC99_RS07170 PF01668 SmpB protein AMC99_RS07175 PF00701 Dihydrodipicolinate synthetase family AMC99_RS07180 PF01464 Transglycosylase SLT domain AMC99_RS07180 PF14718 Soluble lytic murein transglycosylase L domain AMC99_RS07185 PF01272 Transcription elongation factor, GreA/GreB, C-term AMC99_RS07185 PF03449 Transcription elongation factor, N-terminal AMC99_RS07200 PF04055 Radical SAM superfamily AMC99_RS07205 PF03848 Tellurite resistance protein TehB AMC99_RS07205 PF09313 Domain of unknown function (DUF1971) AMC99_RS07210 PF03473 MOSC domain AMC99_RS07210 PF03475 3-alpha domain AMC99_RS07220 PF02567 Phenazine biosynthesis-like protein AMC99_RS07230 PF01292 Prokaryotic cytochrome b561 AMC99_RS07235 PF00174 Oxidoreductase molybdopterin binding domain AMC99_RS07250 PF00764 Arginosuccinate synthase AMC99_RS07255 PF03330 Lytic transglycolase AMC99_RS07285 PF16320 Ribosomal protein L7/L12 dimerisation domain AMC99_RS07285 PF00542 Ribosomal protein L7/L12 C-terminal domain AMC99_RS07290 PF17760 UvrA interaction domain AMC99_RS07290 PF17755 UvrA DNA-binding domain AMC99_RS07310 PF01432 Peptidase family M3 AMC99_RS07315 PF00005 ABC transporter AMC99_RS07320 PF01032 FecCD transport family AMC99_RS07340 PF00563 EAL domain AMC99_RS07340 PF00990 Diguanylate cyclase, GGDEF domain AMC99_RS07340 PF03707 Bacterial signalling protein N terminal repeat AMC99_RS07340 PF13188 PAS domain AMC99_RS07345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMC99_RS07345 PF00056 lactate/malate dehydrogenase, NAD binding domain AMC99_RS07350 PF02629 CoA binding domain AMC99_RS07350 PF00549 CoA-ligase AMC99_RS07355 PF02779 Transketolase, pyrimidine binding domain AMC99_RS07355 PF16870 2-oxoglutarate dehydrogenase C-terminal AMC99_RS07355 PF00676 Dehydrogenase E1 component AMC99_RS07355 PF16078 2-oxoglutarate dehydrogenase N-terminus AMC99_RS07360 PF00364 Biotin-requiring enzyme AMC99_RS07360 PF02817 e3 binding domain AMC99_RS07360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMC99_RS07365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMC99_RS07365 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMC99_RS07385 PF11954 Domain of unknown function (DUF3471) AMC99_RS07385 PF00144 Beta-lactamase AMC99_RS07390 PF01425 Amidase AMC99_RS07395 PF03458 UPF0126 domain AMC99_RS07410 PF01196 Ribosomal protein L17 AMC99_RS07415 PF01000 RNA polymerase Rpb3/RpoA insert domain AMC99_RS07415 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMC99_RS07415 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMC99_RS07420 PF00411 Ribosomal protein S11 AMC99_RS07425 PF00416 Ribosomal protein S13/S18 AMC99_RS07435 PF05191 Adenylate kinase, active site lid AMC99_RS07440 PF00344 SecY translocase AMC99_RS07445 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMC99_RS07455 PF00327 Ribosomal protein L30p/L7e AMC99_RS07460 PF03719 Ribosomal protein S5, C-terminal domain AMC99_RS07460 PF00333 Ribosomal protein S5, N-terminal domain AMC99_RS07465 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMC99_RS07470 PF00347 Ribosomal protein L6 AMC99_RS07475 PF00410 Ribosomal protein S8 AMC99_RS07480 PF00253 Ribosomal protein S14p/S29e AMC99_RS07485 PF00673 ribosomal L5P family C-terminus AMC99_RS07485 PF00281 Ribosomal protein L5 AMC99_RS07490 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMC99_RS07490 PF00467 KOW motif AMC99_RS07495 PF00238 Ribosomal protein L14p/L23e AMC99_RS07500 PF00366 Ribosomal protein S17 AMC99_RS07505 PF00831 Ribosomal L29 protein AMC99_RS07510 PF00252 Ribosomal protein L16p/L10e AMC99_RS07515 PF00189 Ribosomal protein S3, C-terminal domain AMC99_RS07515 PF07650 KH domain AMC99_RS07520 PF00237 Ribosomal protein L22p/L17e AMC99_RS07525 PF00203 Ribosomal protein S19 AMC99_RS07530 PF03947 Ribosomal Proteins L2, C-terminal domain AMC99_RS07530 PF00181 Ribosomal Proteins L2, RNA binding domain AMC99_RS07535 PF00276 Ribosomal protein L23 AMC99_RS07540 PF00573 Ribosomal protein L4/L1 family AMC99_RS07545 PF00297 Ribosomal protein L3 AMC99_RS07550 PF00338 Ribosomal protein S10p/S20e AMC99_RS07555 PF03144 Elongation factor Tu domain 2 AMC99_RS07555 PF03143 Elongation factor Tu C-terminal domain AMC99_RS07555 PF00009 Elongation factor Tu GTP binding domain AMC99_RS07560 PF00679 Elongation factor G C-terminus AMC99_RS07560 PF00009 Elongation factor Tu GTP binding domain AMC99_RS07560 PF03764 Elongation factor G, domain IV AMC99_RS07560 PF03144 Elongation factor Tu domain 2 AMC99_RS07560 PF14492 Elongation Factor G, domain II AMC99_RS07565 PF00177 Ribosomal protein S7p/S5e AMC99_RS07570 PF00164 Ribosomal protein S12/S23 AMC99_RS07600 PF00005 ABC transporter AMC99_RS07600 PF00664 ABC transporter transmembrane region AMC99_RS07600 PF03412 Peptidase C39 family AMC99_RS07605 PF02321 Outer membrane efflux protein AMC99_RS07630 PF00263 Bacterial type II and III secretion system protein AMC99_RS07630 PF04972 BON domain AMC99_RS07630 PF13629 Pilus formation protein N terminal region AMC99_RS07660 PF00437 Type II/IV secretion system protein AMC99_RS07690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMC99_RS07690 PF03466 LysR substrate binding domain AMC99_RS07695 PF04379 ApaG domain AMC99_RS07700 PF01323 DSBA-like thioredoxin domain AMC99_RS07720 PF01053 Cys/Met metabolism PLP-dependent enzyme AMC99_RS07725 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AMC99_RS07725 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase AMC99_RS07735 PF00180 Isocitrate/isopropylmalate dehydrogenase AMC99_RS07740 PF02565 Recombination protein O C terminal AMC99_RS07740 PF11967 Recombination protein O N terminal AMC99_RS07755 PF01728 FtsJ-like methyltransferase AMC99_RS07755 PF01479 S4 domain AMC99_RS07765 PF01063 Amino-transferase class IV AMC99_RS07770 PF00581 Rhodanese-like domain AMC99_RS07770 PF17773 UPF0176 acylphosphatase like domain AMC99_RS07780 PF00795 Carbon-nitrogen hydrolase AMC99_RS07780 PF02540 NAD synthase AMC99_RS07790 PF02798 Glutathione S-transferase, N-terminal domain AMC99_RS07805 PF10017 Histidine-specific methyltransferase, SAM-dependent AMC99_RS07810 PF03781 Sulfatase-modifying factor enzyme 1 AMC99_RS07810 PF12867 DinB superfamily AMC99_RS07815 PF00990 Diguanylate cyclase, GGDEF domain AMC99_RS07815 PF00072 Response regulator receiver domain AMC99_RS07820 PF01474 Class-II DAHP synthetase family AMC99_RS07825 PF05193 Peptidase M16 inactive domain AMC99_RS07825 PF00675 Insulinase (Peptidase family M16) AMC99_RS07830 PF01106 NifU-like domain AMC99_RS07835 PF00881 Nitroreductase family AMC99_RS07840 PF00814 Glycoprotease family AMC99_RS07845 PF13673 Acetyltransferase (GNAT) domain AMC99_RS07850 PF05443 ROS/MUCR transcriptional regulator protein AMC99_RS07855 PF01475 Ferric uptake regulator family AMC99_RS07865 PF03466 LysR substrate binding domain AMC99_RS07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMC99_RS07870 PF00571 CBS domain AMC99_RS07870 PF03471 Transporter associated domain AMC99_RS07875 PF02130 Uncharacterized protein family UPF0054 AMC99_RS07885 PF02562 PhoH-like protein AMC99_RS07895 PF04055 Radical SAM superfamily AMC99_RS07895 PF00919 Uncharacterized protein family UPF0004 AMC99_RS07895 PF01938 TRAM domain AMC99_RS07910 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMC99_RS07915 PF00571 CBS domain AMC99_RS07915 PF01769 Divalent cation transporter AMC99_RS07915 PF03448 MgtE intracellular N domain AMC99_RS07925 PF01323 DSBA-like thioredoxin domain AMC99_RS07930 PF00293 NUDIX domain AMC99_RS07930 PF09297 NADH pyrophosphatase zinc ribbon domain AMC99_RS07930 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMC99_RS07935 PF00144 Beta-lactamase AMC99_RS07945 PF00730 HhH-GPD superfamily base excision DNA repair protein AMC99_RS07945 PF14815 NUDIX domain AMC99_RS07945 PF00633 Helix-hairpin-helix motif AMC99_RS07965 PF02463 RecF/RecN/SMC N terminal domain AMC99_RS07975 PF13411 MerR HTH family regulatory protein AMC99_RS07980 PF00216 Bacterial DNA-binding protein AMC99_RS07985 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMC99_RS07985 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMC99_RS07990 PF02504 Fatty acid synthesis protein AMC99_RS08000 PF00753 Metallo-beta-lactamase superfamily AMC99_RS08025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMC99_RS08025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMC99_RS08035 PF01406 tRNA synthetases class I (C) catalytic domain AMC99_RS08055 PF06213 Cobalamin biosynthesis protein CobT AMC99_RS08055 PF11775 Cobalamin biosynthesis protein CobT VWA domain AMC99_RS08060 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMC99_RS08070 PF00270 DEAD/DEAH box helicase AMC99_RS08070 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMC99_RS08070 PF17764 3′ DNA-binding domain (3′BD) AMC99_RS08070 PF18074 Primosomal protein N C-terminal domain AMC99_RS08075 PF01638 HxlR-like helix-turn-helix AMC99_RS08080 PF02525 Flavodoxin-like fold AMC99_RS08085 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AMC99_RS08100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMC99_RS08100 PF02805 Metal binding domain of Ada AMC99_RS08100 PF12833 Helix-turn-helix domain AMC99_RS08100 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMC99_RS08105 PF02674 Colicin V production protein AMC99_RS08110 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMC99_RS08115 PF00213 ATP synthase delta (OSCP) subunit AMC99_RS08120 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMC99_RS08120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMC99_RS08120 PF00306 ATP synthase alpha/beta chain, C terminal domain AMC99_RS08125 PF00231 ATP synthase AMC99_RS08130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMC99_RS08130 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMC99_RS08135 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMC99_RS08155 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMC99_RS08155 PF00326 Prolyl oligopeptidase family AMC99_RS08170 PF12804 MobA-like NTP transferase domain AMC99_RS08170 PF14602 Hexapeptide repeat of succinyl-transferase AMC99_RS08170 PF00132 Bacterial transferase hexapeptide (six repeats) AMC99_RS08175 PF13419 Haloacid dehalogenase-like hydrolase AMC99_RS08180 PF00106 short chain dehydrogenase AMC99_RS08195 PF02779 Transketolase, pyrimidine binding domain AMC99_RS08195 PF02780 Transketolase, C-terminal domain AMC99_RS08200 PF02033 Ribosome-binding factor A AMC99_RS08215 PF04760 Translation initiation factor IF-2, N-terminal region AMC99_RS08215 PF00009 Elongation factor Tu GTP binding domain AMC99_RS08215 PF11987 Translation-initiation factor 2 AMC99_RS08215 PF08364 Bacterial translation initiation factor IF-2 associated region AMC99_RS08225 PF13184 NusA-like KH domain AMC99_RS08225 PF08529 NusA N-terminal domain AMC99_RS08225 PF00575 S1 RNA binding domain AMC99_RS08230 PF02576 RimP N-terminal domain AMC99_RS08230 PF17384 RimP C-terminal SH3 domain AMC99_RS08235 PF05922 Peptidase inhibitor I9 AMC99_RS08235 PF00082 Subtilase family AMC99_RS08240 PF03958 Bacterial type II/III secretion system short domain AMC99_RS08240 PF00263 Bacterial type II and III secretion system protein AMC99_RS08250 PF02954 Bacterial regulatory protein, Fis family AMC99_RS08250 PF00158 Sigma-54 interaction domain AMC99_RS08255 PF04012 PspA/IM30 family AMC99_RS08290 PF02657 Fe-S metabolism associated domain AMC99_RS08300 PF04116 Fatty acid hydroxylase superfamily AMC99_RS08315 PF00330 Aconitase family (aconitate hydratase) AMC99_RS08325 PF00694 Aconitase C-terminal domain AMC99_RS08330 PF02801 Beta-ketoacyl synthase, C-terminal domain AMC99_RS08330 PF08659 KR domain AMC99_RS08330 PF00550 Phosphopantetheine attachment site AMC99_RS08330 PF16197 Ketoacyl-synthetase C-terminal extension AMC99_RS08330 PF00107 Zinc-binding dehydrogenase AMC99_RS08330 PF00109 Beta-ketoacyl synthase, N-terminal domain AMC99_RS08330 PF00698 Acyl transferase domain AMC99_RS08330 PF14765 Polyketide synthase dehydratase AMC99_RS08330 PF08240 Alcohol dehydrogenase GroES-like domain AMC99_RS08345 PF00462 Glutaredoxin AMC99_RS08365 PF02541 Ppx/GppA phosphatase family AMC99_RS08370 PF13090 Polyphosphate kinase C-terminal domain 2 AMC99_RS08370 PF02503 Polyphosphate kinase middle domain AMC99_RS08370 PF13089 Polyphosphate kinase N-terminal domain AMC99_RS08370 PF17941 Polyphosphate kinase C-terminal domain 1 AMC99_RS08375 PF00248 Aldo/keto reductase family AMC99_RS08385 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS08385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS08385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS08390 PF00999 Sodium/hydrogen exchanger family AMC99_RS08395 PF01259 SAICAR synthetase AMC99_RS08405 PF05193 Peptidase M16 inactive domain AMC99_RS08405 PF00675 Insulinase (Peptidase family M16) AMC99_RS08410 PF07715 TonB-dependent Receptor Plug Domain AMC99_RS08410 PF00593 TonB dependent receptor AMC99_RS08415 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AMC99_RS08425 PF00563 EAL domain AMC99_RS08425 PF00990 Diguanylate cyclase, GGDEF domain AMC99_RS08425 PF03707 Bacterial signalling protein N terminal repeat AMC99_RS08430 PF01380 SIS domain AMC99_RS08435 PF00892 EamA-like transporter family AMC99_RS08440 PF00535 Glycosyl transferase family 2 AMC99_RS08460 PF00534 Glycosyl transferases group 1 AMC99_RS08465 PF00437 Type II/IV secretion system protein AMC99_RS08480 PF13193 AMP-binding enzyme C-terminal domain AMC99_RS08480 PF00501 AMP-binding enzyme AMC99_RS08490 PF01758 Sodium Bile acid symporter family AMC99_RS08495 PF05173 Dihydrodipicolinate reductase, C-terminus AMC99_RS08495 PF01113 Dihydrodipicolinate reductase, N-terminus AMC99_RS08500 PF01966 HD domain AMC99_RS08500 PF13286 Phosphohydrolase-associated domain AMC99_RS08505 PF01177 Asp/Glu/Hydantoin racemase AMC99_RS08520 PF02233 NAD(P) transhydrogenase beta subunit AMC99_RS08525 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMC99_RS08535 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMC99_RS08535 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMC99_RS08540 PF00158 Sigma-54 interaction domain AMC99_RS08540 PF00072 Response regulator receiver domain AMC99_RS08540 PF02954 Bacterial regulatory protein, Fis family AMC99_RS08550 PF00809 Pterin binding enzyme AMC99_RS08555 PF18755 Restriction Enzyme Adenine Methylase Associated AMC99_RS08555 PF01555 DNA methylase AMC99_RS08565 PF01699 Sodium/calcium exchanger protein AMC99_RS08570 PF01351 Ribonuclease HII AMC99_RS08575 PF07995 Glucose / Sorbosone dehydrogenase AMC99_RS08590 PF00293 NUDIX domain AMC99_RS08595 PF12627 Probable RNA and SrmB- binding site of polymerase A AMC99_RS08595 PF01743 Poly A polymerase head domain AMC99_RS08595 PF12626 Polymerase A arginine-rich C-terminus AMC99_RS08610 PF03989 DNA gyrase C-terminal domain, beta-propeller AMC99_RS08610 PF00521 DNA gyrase/topoisomerase IV, subunit A AMC99_RS08615 PF01965 DJ-1/PfpI family AMC99_RS08620 PF00111 2Fe-2S iron-sulfur cluster binding domain AMC99_RS08625 PF00266 Aminotransferase class-V AMC99_RS08630 PF00266 Aminotransferase class-V AMC99_RS08635 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMC99_RS08660 PF01293 Phosphoenolpyruvate carboxykinase AMC99_RS08665 PF00072 Response regulator receiver domain AMC99_RS08665 PF00486 Transcriptional regulatory protein, C terminal AMC99_RS08670 PF00672 HAMP domain AMC99_RS08670 PF13755 Sensor N-terminal transmembrane domain AMC99_RS08670 PF00512 His Kinase A (phospho-acceptor) domain AMC99_RS08670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS08670 PF13756 Stimulus-sensing domain AMC99_RS08675 PF02603 HPr Serine kinase N terminus AMC99_RS08675 PF07475 HPr Serine kinase C-terminal domain AMC99_RS08680 PF03668 P-loop ATPase protein family AMC99_RS08685 PF03610 PTS system fructose IIA component AMC99_RS08685 PF03830 PTS system sorbose subfamily IIB component AMC99_RS08690 PF00381 PTS HPr component phosphorylation site AMC99_RS08695 PF00588 SpoU rRNA Methylase family AMC99_RS08695 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMC99_RS08705 PF02646 RmuC family AMC99_RS08715 PF01327 Polypeptide deformylase AMC99_RS08720 PF02132 RecR protein AMC99_RS08720 PF13662 Toprim domain AMC99_RS08725 PF00551 Formyl transferase AMC99_RS08725 PF02911 Formyl transferase, C-terminal domain AMC99_RS08735 PF01416 tRNA pseudouridine synthase AMC99_RS08745 PF00710 Asparaginase, N-terminal AMC99_RS08745 PF17763 Glutaminase/Asparaginase C-terminal domain AMC99_RS08760 PF00085 Thioredoxin AMC99_RS08765 PF14698 Argininosuccinate lyase C-terminal AMC99_RS08765 PF00206 Lyase AMC99_RS08775 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMC99_RS08775 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMC99_RS08780 PF10414 Sirohaem synthase dimerisation region AMC99_RS08780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMC99_RS08795 PF00709 Adenylosuccinate synthetase AMC99_RS08820 PF00248 Aldo/keto reductase family AMC99_RS08835 PF13393 Histidyl-tRNA synthetase AMC99_RS08840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMC99_RS08840 PF01842 ACT domain AMC99_RS08840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMC99_RS08850 PF13439 Glycosyltransferase Family 4 AMC99_RS08850 PF00534 Glycosyl transferases group 1 AMC99_RS08865 PF03551 Transcriptional regulator PadR-like family AMC99_RS08870 PF00004 ATPase family associated with various cellular activities (AAA) AMC99_RS08870 PF12002 MgsA AAA+ ATPase C terminal AMC99_RS08870 PF16193 AAA C-terminal domain AMC99_RS08890 PF00145 C-5 cytosine-specific DNA methylase AMC99_RS08970 PF14489 QueF-like protein AMC99_RS08985 PF00581 Rhodanese-like domain AMC99_RS08990 PF01053 Cys/Met metabolism PLP-dependent enzyme AMC99_RS08995 PF00924 Mechanosensitive ion channel AMC99_RS08995 PF05552 Conserved TM helix AMC99_RS09000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMC99_RS09000 PF14824 Sirohaem biosynthesis protein central AMC99_RS09000 PF10414 Sirohaem synthase dimerisation region AMC99_RS09020 PF01507 Phosphoadenosine phosphosulfate reductase family AMC99_RS09030 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMC99_RS09035 PF01472 PUA domain AMC99_RS09035 PF00696 Amino acid kinase family AMC99_RS09040 PF01926 50S ribosome-binding GTPase AMC99_RS09040 PF01018 GTP1/OBG AMC99_RS09045 PF00593 TonB dependent receptor AMC99_RS09045 PF07715 TonB-dependent Receptor Plug Domain AMC99_RS09055 PF01027 Inhibitor of apoptosis-promoting Bax1 AMC99_RS09060 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMC99_RS09060 PF03807 NADP oxidoreductase coenzyme F420-dependent AMC99_RS09075 PF12327 FtsZ family, C-terminal domain AMC99_RS09075 PF00091 Tubulin/FtsZ family, GTPase domain AMC99_RS09080 PF02491 SHS2 domain inserted in FTSA AMC99_RS09085 PF03799 Cell division protein FtsQ AMC99_RS09085 PF08478 POTRA domain, FtsQ-type AMC99_RS09090 PF01820 D-ala D-ala ligase N-terminus AMC99_RS09090 PF07478 D-ala D-ala ligase C-terminus AMC99_RS09100 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMC99_RS09100 PF01565 FAD binding domain AMC99_RS09105 PF01225 Mur ligase family, catalytic domain AMC99_RS09105 PF02875 Mur ligase family, glutamate ligase domain AMC99_RS09105 PF08245 Mur ligase middle domain AMC99_RS09110 PF04101 Glycosyltransferase family 28 C-terminal domain AMC99_RS09110 PF03033 Glycosyltransferase family 28 N-terminal domain AMC99_RS09115 PF01098 Cell cycle protein AMC99_RS09120 PF02875 Mur ligase family, glutamate ligase domain AMC99_RS09120 PF08245 Mur ligase middle domain AMC99_RS09125 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AMC99_RS09125 PF00953 Glycosyl transferase family 4 AMC99_RS09130 PF01225 Mur ligase family, catalytic domain AMC99_RS09130 PF02875 Mur ligase family, glutamate ligase domain AMC99_RS09130 PF08245 Mur ligase middle domain AMC99_RS09135 PF08245 Mur ligase middle domain AMC99_RS09135 PF02875 Mur ligase family, glutamate ligase domain AMC99_RS09135 PF01225 Mur ligase family, catalytic domain AMC99_RS09140 PF03717 Penicillin-binding Protein dimerisation domain AMC99_RS09140 PF00905 Penicillin binding protein transpeptidase domain AMC99_RS09150 PF01795 MraW methylase family AMC99_RS09155 PF02381 MraZ protein, putative antitoxin-like AMC99_RS09170 PF00291 Pyridoxal-phosphate dependent enzyme AMC99_RS09175 PF00111 2Fe-2S iron-sulfur cluster binding domain AMC99_RS09185 PF00326 Prolyl oligopeptidase family AMC99_RS09190 PF00106 short chain dehydrogenase AMC99_RS09195 PF01329 Pterin 4 alpha carbinolamine dehydratase AMC99_RS09200 PF13520 Amino acid permease AMC99_RS09205 PF00005 ABC transporter AMC99_RS09210 PF03379 CcmB protein AMC99_RS09215 PF00557 Metallopeptidase family M24 AMC99_RS09225 PF00883 Cytosol aminopeptidase family, catalytic domain AMC99_RS09225 PF02789 Cytosol aminopeptidase family, N-terminal domain AMC99_RS09235 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMC99_RS09240 PF00543 Nitrogen regulatory protein P-II AMC99_RS09245 PF00120 Glutamine synthetase, catalytic domain AMC99_RS09245 PF03951 Glutamine synthetase, beta-Grasp domain AMC99_RS09290 PF01103 Surface antigen AMC99_RS09290 PF07244 Surface antigen variable number repeat AMC99_RS09290 PF17243 POTRA domain TamA domain 1 AMC99_RS09295 PF04376 Arginine-tRNA-protein transferase, N terminus AMC99_RS09295 PF04377 Arginine-tRNA-protein transferase, C terminus AMC99_RS09300 PF00291 Pyridoxal-phosphate dependent enzyme AMC99_RS09300 PF13291 ACT domain AMC99_RS09305 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMC99_RS09305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMC99_RS09310 PF07969 Amidohydrolase family AMC99_RS09320 PF00902 Sec-independent protein translocase protein (TatC) AMC99_RS09325 PF02416 mttA/Hcf106 family AMC99_RS09330 PF02416 mttA/Hcf106 family AMC99_RS09335 PF04079 Segregation and condensation complex subunit ScpB AMC99_RS09340 PF02616 Segregation and condensation protein ScpA AMC99_RS09345 PF00933 Glycosyl hydrolase family 3 N terminal domain AMC99_RS09355 PF00750 tRNA synthetases class I (R) AMC99_RS09355 PF05746 DALR anticodon binding domain AMC99_RS09355 PF03485 Arginyl tRNA synthetase N terminal domain AMC99_RS09355 PF00133 tRNA synthetases class I (I, L, M and V) AMC99_RS09365 PF02401 LytB protein AMC99_RS09370 PF01636 Phosphotransferase enzyme family AMC99_RS09375 PF00075 RNase H AMC99_RS09380 PF01266 FAD dependent oxidoreductase AMC99_RS09400 PF00263 Bacterial type II and III secretion system protein AMC99_RS09400 PF04972 BON domain AMC99_RS09400 PF13629 Pilus formation protein N terminal region AMC99_RS09430 PF00378 Enoyl-CoA hydratase/isomerase AMC99_RS09435 PF00171 Aldehyde dehydrogenase family AMC99_RS09445 PF00106 short chain dehydrogenase AMC99_RS09450 PF00108 Thiolase, N-terminal domain AMC99_RS09450 PF02803 Thiolase, C-terminal domain AMC99_RS09455 PF00593 TonB dependent receptor AMC99_RS09460 PF13181 Tetratricopeptide repeat AMC99_RS09465 PF10431 C-terminal, D2-small domain, of ClpB protein AMC99_RS09465 PF02861 Clp amino terminal domain, pathogenicity island component AMC99_RS09465 PF07724 AAA domain (Cdc48 subfamily) AMC99_RS09465 PF00004 ATPase family associated with various cellular activities (AAA) AMC99_RS09465 PF17871 AAA lid domain AMC99_RS09470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS09470 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS09470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS09480 PF01804 Penicillin amidase AMC99_RS09490 PF12833 Helix-turn-helix domain AMC99_RS09525 PF00672 HAMP domain AMC99_RS09525 PF12729 Four helix bundle sensory module for signal transduction AMC99_RS09525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMC99_RS09535 PF00588 SpoU rRNA Methylase family AMC99_RS09545 PF02934 GatB/GatE catalytic domain AMC99_RS09545 PF02637 GatB domain AMC99_RS09555 PF00534 Glycosyl transferases group 1 AMC99_RS09555 PF13477 Glycosyl transferase 4-like AMC99_RS09560 PF01425 Amidase AMC99_RS09565 PF02686 Glu-tRNAGln amidotransferase C subunit AMC99_RS09575 PF01165 Ribosomal protein S21 AMC99_RS09580 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMC99_RS09585 PF01479 S4 domain AMC99_RS09585 PF00849 RNA pseudouridylate synthase AMC99_RS09595 PF13419 Haloacid dehalogenase-like hydrolase AMC99_RS09620 PF00005 ABC transporter AMC99_RS09625 PF02405 Permease MlaE AMC99_RS09630 PF08264 Anticodon-binding domain of tRNA AMC99_RS09630 PF00133 tRNA synthetases class I (I, L, M and V) AMC99_RS09630 PF10458 Valyl tRNA synthetase tRNA binding arm AMC99_RS09650 PF01925 Sulfite exporter TauE/SafE AMC99_RS09660 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMC99_RS09660 PF13632 Glycosyl transferase family group 2 AMC99_RS09665 PF06965 Na+/H+ antiporter 1 AMC99_RS09685 PF00149 Calcineurin-like phosphoesterase AMC99_RS09690 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMC99_RS09690 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMC99_RS09690 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMC99_RS09710 PF10090 Histidine phosphotransferase C-terminal domain AMC99_RS09720 PF00849 RNA pseudouridylate synthase AMC99_RS09725 PF04545 Sigma-70, region 4 AMC99_RS09725 PF00140 Sigma-70 factor, region 1.2 AMC99_RS09725 PF04542 Sigma-70 region 2 AMC99_RS09730 PF00912 Transglycosylase AMC99_RS09735 PF01545 Cation efflux family AMC99_RS09740 PF01522 Polysaccharide deacetylase AMC99_RS09745 PF01522 Polysaccharide deacetylase AMC99_RS09745 PF00457 Glycosyl hydrolases family 11 AMC99_RS09745 PF03422 Carbohydrate binding module (family 6) AMC99_RS09765 PF07724 AAA domain (Cdc48 subfamily) AMC99_RS09765 PF10431 C-terminal, D2-small domain, of ClpB protein AMC99_RS09765 PF06689 ClpX C4-type zinc finger AMC99_RS09770 PF00574 Clp protease AMC99_RS09780 PF01425 Amidase AMC99_RS09785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMC99_RS09785 PF05698 Bacterial trigger factor protein (TF) C-terminus AMC99_RS09785 PF05697 Bacterial trigger factor protein (TF) AMC99_RS09800 PF01926 50S ribosome-binding GTPase AMC99_RS09800 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMC99_RS09810 PF04235 Protein of unknown function (DUF418) AMC99_RS09820 PF13614 AAA domain AMC99_RS09835 PF01979 Amidohydrolase family AMC99_RS09840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMC99_RS09840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMC99_RS09845 PF01343 Peptidase family S49 AMC99_RS09855 PF00171 Aldehyde dehydrogenase family AMC99_RS09860 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMC99_RS09860 PF03807 NADP oxidoreductase coenzyme F420-dependent AMC99_RS09865 PF00696 Amino acid kinase family AMC99_RS09865 PF01472 PUA domain AMC99_RS09885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMC99_RS09885 PF02403 Seryl-tRNA synthetase N-terminal domain AMC99_RS09890 PF01975 Survival protein SurE AMC99_RS09905 PF00919 Uncharacterized protein family UPF0004 AMC99_RS09905 PF18693 TRAM domain AMC99_RS09905 PF04055 Radical SAM superfamily AMC99_RS09910 PF01894 Uncharacterised protein family UPF0047 AMC99_RS09915 PF10459 Peptidase S46 AMC99_RS09925 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMC99_RS09925 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMC99_RS09930 PF00920 Dehydratase family AMC99_RS09935 PF02685 Glucokinase AMC99_RS09940 PF01081 KDPG and KHG aldolase AMC99_RS09955 PF01171 PP-loop family AMC99_RS09970 PF02896 PEP-utilising enzyme, TIM barrel domain AMC99_RS09970 PF05524 PEP-utilising enzyme, N-terminal AMC99_RS09970 PF00391 PEP-utilising enzyme, mobile domain AMC99_RS09985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMC99_RS09985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMC99_RS10005 PF02445 Quinolinate synthetase A protein AMC99_RS10010 PF10011 Predicted membrane protein (DUF2254) AMC99_RS10025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMC99_RS10035 PF03099 Biotin/lipoate A/B protein ligase family AMC99_RS10055 PF03960 ArsC family AMC99_RS10060 PF00593 TonB dependent receptor AMC99_RS10060 PF07715 TonB-dependent Receptor Plug Domain AMC99_RS10065 PF01799 [2Fe-2S] binding domain AMC99_RS10065 PF00111 2Fe-2S iron-sulfur cluster binding domain AMC99_RS10070 PF00596 Class II Aldolase and Adducin N-terminal domain AMC99_RS10075 PF01554 MatE AMC99_RS10080 PF01627 Hpt domain AMC99_RS10080 PF02895 Signal transducing histidine kinase, homodimeric domain AMC99_RS10080 PF01584 CheW-like domain AMC99_RS10080 PF07194 P2 response regulator binding domain AMC99_RS10080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS10090 PF00486 Transcriptional regulatory protein, C terminal AMC99_RS10090 PF00072 Response regulator receiver domain AMC99_RS10095 PF00072 Response regulator receiver domain AMC99_RS10095 PF01339 CheB methylesterase AMC99_RS10100 PF03705 CheR methyltransferase, all-alpha domain AMC99_RS10100 PF01739 CheR methyltransferase, SAM binding domain AMC99_RS10105 PF00990 Diguanylate cyclase, GGDEF domain AMC99_RS10105 PF08447 PAS fold AMC99_RS10105 PF08448 PAS fold AMC99_RS10105 PF00563 EAL domain AMC99_RS10110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMC99_RS10110 PF08269 Cache domain AMC99_RS10115 PF03466 LysR substrate binding domain AMC99_RS10115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMC99_RS10125 PF02515 CoA-transferase family III AMC99_RS10130 PF00465 Iron-containing alcohol dehydrogenase AMC99_RS10135 PF00501 AMP-binding enzyme AMC99_RS10135 PF13193 AMP-binding enzyme C-terminal domain AMC99_RS10140 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AMC99_RS10140 PF00890 FAD binding domain AMC99_RS10145 PF00107 Zinc-binding dehydrogenase AMC99_RS10145 PF08240 Alcohol dehydrogenase GroES-like domain AMC99_RS10150 PF00067 Cytochrome P450 AMC99_RS10155 PF00753 Metallo-beta-lactamase superfamily AMC99_RS10160 PF07715 TonB-dependent Receptor Plug Domain AMC99_RS10160 PF00593 TonB dependent receptor AMC99_RS10170 PF01070 FMN-dependent dehydrogenase AMC99_RS10175 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AMC99_RS10180 PF00849 RNA pseudouridylate synthase AMC99_RS10190 PF00589 Phage integrase family AMC99_RS10205 PF00486 Transcriptional regulatory protein, C terminal AMC99_RS10205 PF00072 Response regulator receiver domain AMC99_RS10210 PF08240 Alcohol dehydrogenase GroES-like domain AMC99_RS10210 PF00107 Zinc-binding dehydrogenase AMC99_RS10215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS10215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS10215 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS10235 PF00486 Transcriptional regulatory protein, C terminal AMC99_RS10235 PF00072 Response regulator receiver domain AMC99_RS10250 PF00535 Glycosyl transferase family 2 AMC99_RS10260 PF00072 Response regulator receiver domain AMC99_RS10260 PF00486 Transcriptional regulatory protein, C terminal AMC99_RS10265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS10265 PF16736 Single Cache-like AMC99_RS10265 PF00989 PAS fold AMC99_RS10265 PF00512 His Kinase A (phospho-acceptor) domain AMC99_RS10295 PF08448 PAS fold AMC99_RS10295 PF08447 PAS fold AMC99_RS10295 PF00563 EAL domain AMC99_RS10295 PF00990 Diguanylate cyclase, GGDEF domain AMC99_RS10365 PF00005 ABC transporter AMC99_RS10365 PF00664 ABC transporter transmembrane region AMC99_RS10370 PF05193 Peptidase M16 inactive domain AMC99_RS10375 PF01740 STAS domain AMC99_RS10375 PF00916 Sulfate permease family AMC99_RS10385 PF07724 AAA domain (Cdc48 subfamily) AMC99_RS10385 PF00004 ATPase family associated with various cellular activities (AAA) AMC99_RS10390 PF00227 Proteasome subunit AMC99_RS10410 PF00436 Single-strand binding protein family AMC99_RS10415 PF07670 Nucleoside recognition AMC99_RS10415 PF02421 Ferrous iron transport protein B AMC99_RS10415 PF07664 Ferrous iron transport protein B C terminus AMC99_RS10435 PF02630 SCO1/SenC AMC99_RS10440 PF03692 Putative zinc- or iron-chelating domain AMC99_RS10460 PF01872 RibD C-terminal domain AMC99_RS10460 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMC99_RS10465 PF00677 Lumazine binding domain AMC99_RS10475 PF13488 Glycine zipper AMC99_RS10475 PF00691 OmpA family AMC99_RS10485 PF00155 Aminotransferase class I and II AMC99_RS10500 PF13356 Arm DNA-binding domain AMC99_RS10500 PF00589 Phage integrase family AMC99_RS10505 PF03109 ABC1 family AMC99_RS10515 PF13533 Biotin-lipoyl like AMC99_RS10520 PF07690 Major Facilitator Superfamily AMC99_RS10525 PF02321 Outer membrane efflux protein AMC99_RS10535 PF18272 single-stranded DNA binding TraI N-terminal subdomain AMC99_RS10535 PF08751 TrwC relaxase AMC99_RS10535 PF07057 DNA helicase TraI AMC99_RS10535 PF18272 single-stranded DNA binding TraI N-terminal subdomain AMC99_RS10535 PF18340 DNA relaxase TraI 2B/2B-like domain AMC99_RS10535 PF08751 TrwC relaxase AMC99_RS10535 PF18340 DNA relaxase TraI 2B/2B-like domain AMC99_RS10535 PF07057 DNA helicase TraI AMC99_RS10545 PF13086 AAA domain AMC99_RS10545 PF13086 AAA domain AMC99_RS10545 PF13195 Protein of unknown function (DUF4011) AMC99_RS10545 PF13195 Protein of unknown function (DUF4011) AMC99_RS10545 PF13087 AAA domain AMC99_RS10545 PF13087 AAA domain AMC99_RS10560 PF13657 HipA N-terminal domain AMC99_RS10560 PF07804 HipA-like C-terminal domain AMC99_RS10565 PF01381 Helix-turn-helix AMC99_RS10580 PF02583 Metal-sensitive transcriptional repressor AMC99_RS10585 PF07731 Multicopper oxidase AMC99_RS10585 PF00394 Multicopper oxidase AMC99_RS10585 PF07732 Multicopper oxidase AMC99_RS10590 PF05275 Copper resistance protein B precursor (CopB) AMC99_RS10595 PF01238 Phosphomannose isomerase type I AMC99_RS10605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMC99_RS10615 PF00108 Thiolase, N-terminal domain AMC99_RS10615 PF02803 Thiolase, C-terminal domain AMC99_RS10620 PF00378 Enoyl-CoA hydratase/isomerase AMC99_RS10625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS10625 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS10625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS10630 PF07715 TonB-dependent Receptor Plug Domain AMC99_RS10635 PF00743 Flavin-binding monooxygenase-like AMC99_RS10640 PF18146 Damage-inducible protein CinA KH domain AMC99_RS10640 PF00994 Probable molybdopterin binding domain AMC99_RS10640 PF02464 Competence-damaged protein AMC99_RS10655 PF00687 Ribosomal protein L1p/L10e family AMC99_RS10660 PF03946 Ribosomal protein L11, N-terminal domain AMC99_RS10660 PF00298 Ribosomal protein L11, RNA binding domain AMC99_RS10690 PF00550 Phosphopantetheine attachment site AMC99_RS10690 PF00668 Condensation domain AMC99_RS10690 PF18563 TubC N-terminal docking domain AMC99_RS10690 PF00501 AMP-binding enzyme AMC99_RS10690 PF13193 AMP-binding enzyme C-terminal domain AMC99_RS10700 PF03062 MBOAT, membrane-bound O-acyltransferase family AMC99_RS10705 PF00467 KOW motif AMC99_RS10705 PF02357 Transcription termination factor nusG AMC99_RS10715 PF01235 Sodium:alanine symporter family AMC99_RS10735 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMC99_RS10740 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) AMC99_RS10760 PF00501 AMP-binding enzyme AMC99_RS10790 PF08446 PAS fold AMC99_RS10790 PF01590 GAF domain AMC99_RS10790 PF00360 Phytochrome region AMC99_RS10790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS10790 PF00512 His Kinase A (phospho-acceptor) domain AMC99_RS10795 PF01050 Mannose-6-phosphate isomerase AMC99_RS10795 PF00483 Nucleotidyl transferase AMC99_RS10805 PF00072 Response regulator receiver domain AMC99_RS10805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS10805 PF00512 His Kinase A (phospho-acceptor) domain AMC99_RS10805 PF09308 LuxQ, periplasmic AMC99_RS10810 PF00593 TonB dependent receptor AMC99_RS10820 PF07662 Na+ dependent nucleoside transporter C-terminus AMC99_RS10820 PF01773 Na+ dependent nucleoside transporter N-terminus AMC99_RS10830 PF13520 Amino acid permease AMC99_RS10835 PF00355 Rieske [2Fe-2S] domain AMC99_RS10835 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AMC99_RS10845 PF13426 PAS domain AMC99_RS10845 PF00196 Bacterial regulatory proteins, luxR family AMC99_RS10850 PF01339 CheB methylesterase AMC99_RS10850 PF08448 PAS fold AMC99_RS10850 PF03705 CheR methyltransferase, all-alpha domain AMC99_RS10850 PF01739 CheR methyltransferase, SAM binding domain AMC99_RS10865 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMC99_RS10875 PF02540 NAD synthase AMC99_RS10875 PF00795 Carbon-nitrogen hydrolase AMC99_RS10885 PF01625 Peptide methionine sulfoxide reductase AMC99_RS10895 PF01189 16S rRNA methyltransferase RsmB/F AMC99_RS10895 PF01029 NusB family AMC99_RS10900 PF00067 Cytochrome P450 AMC99_RS10910 PF00762 Ferrochelatase AMC99_RS10920 PF10609 NUBPL iron-transfer P-loop NTPase AMC99_RS10925 PF01145 SPFH domain / Band 7 family AMC99_RS10930 PF01145 SPFH domain / Band 7 family AMC99_RS10935 PF13180 PDZ domain AMC99_RS10940 PF00905 Penicillin binding protein transpeptidase domain AMC99_RS10940 PF00912 Transglycosylase AMC99_RS10945 PF01641 SelR domain AMC99_RS10970 PF00561 alpha/beta hydrolase fold AMC99_RS10970 PF07021 Methionine biosynthesis protein MetW AMC99_RS10975 PF00561 alpha/beta hydrolase fold AMC99_RS10980 PF00155 Aminotransferase class I and II AMC99_RS10985 PF02153 Prephenate dehydrogenase AMC99_RS11010 PF00005 ABC transporter AMC99_RS11015 PF13717 zinc-ribbon domain AMC99_RS11030 PF01619 Proline dehydrogenase AMC99_RS11030 PF14850 DNA-binding domain of Proline dehydrogenase AMC99_RS11030 PF00171 Aldehyde dehydrogenase family AMC99_RS11030 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMC99_RS11035 PF01037 Lrp/AsnC ligand binding domain AMC99_RS11040 PF00171 Aldehyde dehydrogenase family AMC99_RS11045 PF01048 Phosphorylase superfamily AMC99_RS11050 PF00107 Zinc-binding dehydrogenase AMC99_RS11050 PF08240 Alcohol dehydrogenase GroES-like domain AMC99_RS11065 PF00692 dUTPase AMC99_RS11075 PF03435 Saccharopine dehydrogenase NADP binding domain AMC99_RS11080 PF00593 TonB dependent receptor AMC99_RS11080 PF07715 TonB-dependent Receptor Plug Domain AMC99_RS11090 PF00085 Thioredoxin AMC99_RS11100 PF01914 MarC family integral membrane protein AMC99_RS11110 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMC99_RS11110 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMC99_RS11115 PF02325 YGGT family AMC99_RS11120 PF00696 Amino acid kinase family AMC99_RS11150 PF00268 Ribonucleotide reductase, small chain AMC99_RS11170 PF03477 ATP cone domain AMC99_RS11170 PF00317 Ribonucleotide reductase, all-alpha domain AMC99_RS11170 PF02867 Ribonucleotide reductase, barrel domain AMC99_RS11175 PF00561 alpha/beta hydrolase fold AMC99_RS11185 PF02910 Fumarate reductase flavoprotein C-term AMC99_RS11185 PF00890 FAD binding domain AMC99_RS11195 PF00005 ABC transporter AMC99_RS11220 PF03060 Nitronate monooxygenase AMC99_RS11225 PF00730 HhH-GPD superfamily base excision DNA repair protein AMC99_RS11225 PF00633 Helix-hairpin-helix motif AMC99_RS11240 PF02540 NAD synthase AMC99_RS11240 PF00958 GMP synthase C terminal domain AMC99_RS11240 PF00117 Glutamine amidotransferase class-I AMC99_RS11245 PF07690 Major Facilitator Superfamily AMC99_RS11250 PF13193 AMP-binding enzyme C-terminal domain AMC99_RS11250 PF00501 AMP-binding enzyme AMC99_RS11255 PF02585 GlcNAc-PI de-N-acetylase AMC99_RS11265 PF00986 DNA gyrase B subunit, carboxyl terminus AMC99_RS11265 PF00204 DNA gyrase B AMC99_RS11265 PF01751 Toprim domain AMC99_RS11265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS11275 PF00149 Calcineurin-like phosphoesterase AMC99_RS11290 PF01553 Acyltransferase AMC99_RS11295 PF01039 Carboxyl transferase domain AMC99_RS11305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS11305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS11305 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS11310 PF13426 PAS domain AMC99_RS11310 PF07536 HWE histidine kinase AMC99_RS11310 PF13581 Histidine kinase-like ATPase domain AMC99_RS11320 PF00005 ABC transporter AMC99_RS11320 PF00571 CBS domain AMC99_RS11325 PF00528 Binding-protein-dependent transport system inner membrane component AMC99_RS11335 PF01790 Prolipoprotein diacylglyceryl transferase AMC99_RS11340 PF00501 AMP-binding enzyme AMC99_RS11340 PF13193 AMP-binding enzyme C-terminal domain AMC99_RS11345 PF08335 GlnD PII-uridylyltransferase AMC99_RS11345 PF01966 HD domain AMC99_RS11345 PF03445 Putative nucleotidyltransferase DUF294 AMC99_RS11350 PF02954 Bacterial regulatory protein, Fis family AMC99_RS11350 PF02954 Bacterial regulatory protein, Fis family AMC99_RS11355 PF00171 Aldehyde dehydrogenase family AMC99_RS11370 PF01168 Alanine racemase, N-terminal domain AMC99_RS11375 PF02581 Thiamine monophosphate synthase AMC99_RS11380 PF09397 Ftsk gamma domain AMC99_RS11380 PF01580 FtsK/SpoIIIE family AMC99_RS11380 PF17854 FtsK alpha domain AMC99_RS11380 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMC99_RS11385 PF00990 Diguanylate cyclase, GGDEF domain AMC99_RS11395 PF00326 Prolyl oligopeptidase family AMC99_RS11395 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMC99_RS11415 PF00072 Response regulator receiver domain AMC99_RS11415 PF00486 Transcriptional regulatory protein, C terminal AMC99_RS11420 PF00512 His Kinase A (phospho-acceptor) domain AMC99_RS11420 PF00672 HAMP domain AMC99_RS11420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS11425 PF05872 Bacterial protein of unknown function (DUF853) AMC99_RS11430 PF04715 Anthranilate synthase component I, N terminal region AMC99_RS11430 PF00425 chorismate binding enzyme AMC99_RS11435 PF00849 RNA pseudouridylate synthase AMC99_RS11445 PF00471 Ribosomal protein L33 AMC99_RS11455 PF00245 Alkaline phosphatase AMC99_RS11465 PF00925 GTP cyclohydrolase II AMC99_RS11500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS11500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS11500 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS11505 PF02515 CoA-transferase family III AMC99_RS11510 PF00108 Thiolase, N-terminal domain AMC99_RS11510 PF02803 Thiolase, C-terminal domain AMC99_RS11520 PF03976 Polyphosphate kinase 2 (PPK2) AMC99_RS11525 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AMC99_RS11540 PF02673 Bacitracin resistance protein BacA AMC99_RS11545 PF01431 Peptidase family M13 AMC99_RS11545 PF05649 Peptidase family M13 AMC99_RS11550 PF00005 ABC transporter AMC99_RS11550 PF00664 ABC transporter transmembrane region AMC99_RS11560 PF13520 Amino acid permease AMC99_RS11570 PF00108 Thiolase, N-terminal domain AMC99_RS11570 PF02803 Thiolase, C-terminal domain AMC99_RS11575 PF01575 MaoC like domain AMC99_RS11600 PF01493 GXGXG motif AMC99_RS11600 PF01645 Conserved region in glutamate synthase AMC99_RS11600 PF00310 Glutamine amidotransferases class-II AMC99_RS11600 PF04898 Glutamate synthase central domain AMC99_RS11605 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMC99_RS11605 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMC99_RS11620 PF00378 Enoyl-CoA hydratase/isomerase AMC99_RS11625 PF03167 Uracil DNA glycosylase superfamily AMC99_RS11645 PF02397 Bacterial sugar transferase AMC99_RS11660 PF08264 Anticodon-binding domain of tRNA AMC99_RS11660 PF13603 Leucyl-tRNA synthetase, Domain 2 AMC99_RS11660 PF00133 tRNA synthetases class I (I, L, M and V) AMC99_RS11690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMC99_RS11695 PF00483 Nucleotidyl transferase AMC99_RS11700 PF00067 Cytochrome P450 AMC99_RS11705 PF13193 AMP-binding enzyme C-terminal domain AMC99_RS11705 PF00501 AMP-binding enzyme AMC99_RS11710 PF08525 Opacity-associated protein A N-terminal motif AMC99_RS11710 PF01476 LysM domain AMC99_RS11710 PF01551 Peptidase family M23 AMC99_RS11715 PF04305 Protein of unknown function (DUF455) AMC99_RS11720 PF00578 AhpC/TSA family AMC99_RS11725 PF03710 Glutamate-ammonia ligase adenylyltransferase AMC99_RS11725 PF08335 GlnD PII-uridylyltransferase AMC99_RS11735 PF04371 Porphyromonas-type peptidyl-arginine deiminase AMC99_RS11745 PF02824 TGS domain AMC99_RS11745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMC99_RS11745 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMC99_RS11745 PF03129 Anticodon binding domain AMC99_RS11760 PF01381 Helix-turn-helix AMC99_RS11765 PF12697 Alpha/beta hydrolase family AMC99_RS11770 PF16655 PhoD-like phosphatase, N-terminal domain AMC99_RS11770 PF09423 PhoD-like phosphatase AMC99_RS11785 PF00296 Luciferase-like monooxygenase AMC99_RS11790 PF05088 Bacterial NAD-glutamate dehydrogenase AMC99_RS11795 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMC99_RS11795 PF14759 Reductase C-terminal AMC99_RS11800 PF02515 CoA-transferase family III AMC99_RS11805 PF08331 Domain of unknown function (DUF1730) AMC99_RS11810 PF13732 Domain of unknown function (DUF4162) AMC99_RS11810 PF00005 ABC transporter AMC99_RS11820 PF00067 Cytochrome P450 AMC99_RS11825 PF01641 SelR domain AMC99_RS11855 PF00216 Bacterial DNA-binding protein AMC99_RS11860 PF00392 Bacterial regulatory proteins, gntR family AMC99_RS11860 PF07702 UTRA domain AMC99_RS11865 PF00854 POT family AMC99_RS11870 PF00449 Urease alpha-subunit, N-terminal domain AMC99_RS11870 PF01979 Amidohydrolase family AMC99_RS11875 PF13382 Adenine deaminase C-terminal domain AMC99_RS11875 PF01979 Amidohydrolase family AMC99_RS11885 PF00378 Enoyl-CoA hydratase/isomerase AMC99_RS11895 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMC99_RS11895 PF02779 Transketolase, pyrimidine binding domain AMC99_RS11895 PF02780 Transketolase, C-terminal domain AMC99_RS11905 PF01625 Peptide methionine sulfoxide reductase AMC99_RS11910 PF02142 MGS-like domain AMC99_RS11910 PF01808 AICARFT/IMPCHase bienzyme AMC99_RS11920 PF00834 Ribulose-phosphate 3 epimerase family AMC99_RS11940 PF01546 Peptidase family M20/M25/M40 AMC99_RS11940 PF07687 Peptidase dimerisation domain AMC99_RS11945 PF07690 Major Facilitator Superfamily AMC99_RS11950 PF14310 Fibronectin type III-like domain AMC99_RS11950 PF07691 PA14 domain AMC99_RS11950 PF00933 Glycosyl hydrolase family 3 N terminal domain AMC99_RS11950 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMC99_RS11960 PF00356 Bacterial regulatory proteins, lacI family AMC99_RS11965 PF04820 Tryptophan halogenase AMC99_RS11980 PF04820 Tryptophan halogenase AMC99_RS12025 PF07859 alpha/beta hydrolase fold AMC99_RS12050 PF06580 Histidine kinase AMC99_RS12050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS12050 PF07694 5TMR of 5TMR-LYT AMC99_RS12055 PF00072 Response regulator receiver domain AMC99_RS12055 PF04397 LytTr DNA-binding domain AMC99_RS12060 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMC99_RS12060 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMC99_RS12070 PF00445 Ribonuclease T2 family AMC99_RS12075 PF14437 MafB19-like deaminase AMC99_RS12080 PF00830 Ribosomal L28 family AMC99_RS12100 PF13742 OB-fold nucleic acid binding domain AMC99_RS12100 PF02601 Exonuclease VII, large subunit AMC99_RS12105 PF02843 Phosphoribosylglycinamide synthetase, C domain AMC99_RS12105 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMC99_RS12105 PF02844 Phosphoribosylglycinamide synthetase, N domain AMC99_RS12115 PF00294 pfkB family carbohydrate kinase AMC99_RS12135 PF01521 Iron-sulphur cluster biosynthesis AMC99_RS12140 PF00583 Acetyltransferase (GNAT) family AMC99_RS12150 PF01883 Iron-sulfur cluster assembly protein AMC99_RS12155 PF00266 Aminotransferase class-V AMC99_RS12160 PF01458 Uncharacterized protein family (UPF0051) AMC99_RS12165 PF00005 ABC transporter AMC99_RS12180 PF01458 Uncharacterized protein family (UPF0051) AMC99_RS12185 PF02082 Transcriptional regulator AMC99_RS12205 PF01180 Dihydroorotate dehydrogenase AMC99_RS12215 PF00501 AMP-binding enzyme AMC99_RS12225 PF05690 Thiazole biosynthesis protein ThiG AMC99_RS12235 PF02628 Cytochrome oxidase assembly protein AMC99_RS12250 PF00572 Ribosomal protein L13 AMC99_RS12255 PF00380 Ribosomal protein S9/S16 AMC99_RS12290 PF00072 Response regulator receiver domain AMC99_RS12290 PF04397 LytTr DNA-binding domain AMC99_RS12295 PF07694 5TMR of 5TMR-LYT AMC99_RS12295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMC99_RS12295 PF13492 GAF domain AMC99_RS12295 PF06580 Histidine kinase AMC99_RS12300 PF05683 Fumarase C-terminus AMC99_RS12300 PF05681 Fumarate hydratase (Fumerase) AMC99_RS12310 PF02321 Outer membrane efflux protein AMC99_RS12335 PF01521 Iron-sulphur cluster biosynthesis AMC99_RS12360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMC99_RS12365 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AMC99_RS12365 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMC99_RS12370 PF00929 Exonuclease AMC99_RS12375 PF01121 Dephospho-CoA kinase AMC99_RS12380 PF08501 Shikimate dehydrogenase substrate binding domain AMC99_RS12380 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMC99_RS12385 PF02545 Maf-like protein AMC99_RS12390 PF03618 Kinase/pyrophosphorylase AMC99_RS12395 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMC99_RS12400 PF03653 Uncharacterised protein family (UPF0093) AMC99_RS12405 PF07498 Rho termination factor, N-terminal domain AMC99_RS12405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMC99_RS12405 PF07497 Rho termination factor, RNA-binding domain AMC99_RS12420 PF01645 Conserved region in glutamate synthase AMC99_RS12425 PF01738 Dienelactone hydrolase family AMC99_RS12435 PF12631 MnmE helical domain AMC99_RS12435 PF01926 50S ribosome-binding GTPase AMC99_RS12435 PF10396 GTP-binding protein TrmE N-terminus AMC99_RS12440 PF13932 GidA associated domain AMC99_RS12440 PF01134 Glucose inhibited division protein A AMC99_RS12445 PF02527 rRNA small subunit methyltransferase G AMC99_RS12450 PF13614 AAA domain AMC99_RS12455 PF17762 HTH domain found in ParB protein AMC99_RS12455 PF02195 ParB-like nuclease domain AMC99_RS12480 PF13185 GAF domain AMC99_RS12485 PF07995 Glucose / Sorbosone dehydrogenase AMC99_RS12495 PF02770 Acyl-CoA dehydrogenase, middle domain AMC99_RS12495 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMC99_RS12495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMC99_RS12495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMC99_RS12500 PF01300 Telomere recombination AMC99_RS12500 PF03481 Putative GTP-binding controlling metal-binding AMC99_RS12510 PF02559 CarD-like/TRCF domain AMC99_RS12515 PF11953 Domain of unknown function (DUF3470) AMC99_RS12515 PF00037 4Fe-4S binding domain AMC99_RS12530 PF01551 Peptidase family M23 AMC99_RS12530 PF01464 Transglycosylase SLT domain AMC99_RS12530 PF10145 Phage-related minor tail protein AMC99_RS12535 PF00490 Delta-aminolevulinic acid dehydratase AMC99_RS12555 PF02594 Uncharacterised ACR, YggU family COG1872 AMC99_RS12560 PF06912 Protein of unknown function (DUF1275) AMC99_RS12565 PF01068 ATP dependent DNA ligase domain AMC99_RS12565 PF04675 DNA ligase N terminus AMC99_RS12565 PF04679 ATP dependent DNA ligase C terminal region AMC99_RS12580 PF00004 ATPase family associated with various cellular activities (AAA) AMC99_RS12580 PF07724 AAA domain (Cdc48 subfamily) AMC99_RS12580 PF17871 AAA lid domain AMC99_RS12580 PF02861 Clp amino terminal domain, pathogenicity island component AMC99_RS12580 PF10431 C-terminal, D2-small domain, of ClpB protein AMC99_RS12590 PF08240 Alcohol dehydrogenase GroES-like domain AMC99_RS12590 PF00107 Zinc-binding dehydrogenase AMC99_RS12595 PF13417 Glutathione S-transferase, N-terminal domain AMC99_RS12605 PF00501 AMP-binding enzyme AMC99_RS12605 PF13193 AMP-binding enzyme C-terminal domain AMC99_RS12615 PF01551 Peptidase family M23 AMC99_RS12615 PF08525 Opacity-associated protein A N-terminal motif AMC99_RS12615 PF01476 LysM domain AMC99_RS12620 PF00171 Aldehyde dehydrogenase family AMC99_RS12625 PF01467 Cytidylyltransferase-like AMC99_RS12635 PF02590 Predicted SPOUT methyltransferase AMC99_RS12645 PF03572 Peptidase family S41 AMC99_RS12645 PF13180 PDZ domain AMC99_RS12655 PF03232 Ubiquinone biosynthesis protein COQ7 AMC99_RS12665 PF16363 GDP-mannose 4,6 dehydratase AMC99_RS12670 PF02397 Bacterial sugar transferase AMC99_RS12680 PF00483 Nucleotidyl transferase AMC99_RS12685 PF04321 RmlD substrate binding domain AMC99_RS12690 PF16363 GDP-mannose 4,6 dehydratase AMC99_RS12695 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMC99_RS12725 PF00534 Glycosyl transferases group 1 AMC99_RS12725 PF13439 Glycosyltransferase Family 4 AMC99_RS12750 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMC99_RS12750 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMC99_RS12750 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMC99_RS12770 PF13614 AAA domain AMC99_RS12770 PF02706 Chain length determinant protein AMC99_RS12770 PF13807 G-rich domain on putative tyrosine kinase AMC99_RS12785 PF03631 Virulence factor BrkB AMC99_RS12790 PF00684 DnaJ central domain AMC99_RS12790 PF00226 DnaJ domain AMC99_RS12790 PF01556 DnaJ C terminal domain AMC99_RS12795 PF01243 Pyridoxamine 5'-phosphate oxidase AMC99_RS12795 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMC99_RS12800 PF16916 Dimerisation domain of Zinc Transporter AMC99_RS12800 PF01545 Cation efflux family AMC99_RS12805 PF02567 Phenazine biosynthesis-like protein AMC99_RS12840 PF04226 Transglycosylase associated protein AMC99_RS12845 PF13533 Biotin-lipoyl like AMC99_RS12850 PF00873 AcrB/AcrD/AcrF family AMC99_RS12855 PF04286 Protein of unknown function (DUF445) AMC99_RS12865 PF00766 Electron transfer flavoprotein FAD-binding domain AMC99_RS12865 PF01012 Electron transfer flavoprotein domain AMC99_RS12870 PF01012 Electron transfer flavoprotein domain AMC99_RS12880 PF00549 CoA-ligase AMC99_RS12880 PF08442 ATP-grasp domain AMC99_RS12885 PF00459 Inositol monophosphatase family AMC99_RS12890 PF01389 OmpA-like transmembrane domain AMC99_RS12890 PF00691 OmpA family AMC99_RS12895 PF00571 CBS domain AMC99_RS12895 PF03471 Transporter associated domain AMC99_RS12895 PF01595 Cyclin M transmembrane N-terminal domain AMC99_RS12905 PF01252 Signal peptidase (SPase) II AMC99_RS12910 PF00133 tRNA synthetases class I (I, L, M and V) AMC99_RS12910 PF08264 Anticodon-binding domain of tRNA AMC99_RS12915 PF06574 FAD synthetase AMC99_RS12915 PF01687 Riboflavin kinase AMC99_RS12920 PF01244 Membrane dipeptidase (Peptidase family M19) AMC99_RS12925 PF00186 Dihydrofolate reductase AMC99_RS12930 PF02222 ATP-grasp domain AMC99_RS12930 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMC99_RS12935 PF00731 AIR carboxylase AMC99_RS12940 PF00300 Histidine phosphatase superfamily (branch 1) AMC99_RS12950 PF12804 MobA-like NTP transferase domain AMC99_RS12960 PF03703 Bacterial PH domain AMC99_RS12970 PF01212 Beta-eliminating lyase AMC99_RS12985 PF01433 Peptidase family M1 domain AMC99_RS12985 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AMC99_RS12985 PF11940 Domain of unknown function (DUF3458) Ig-like fold AMC99_RS12990 PF02578 Multi-copper polyphenol oxidoreductase laccase AMC99_RS12995 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AMC99_RS12995 PF00355 Rieske [2Fe-2S] domain AMC99_RS13000 PF00033 Cytochrome b/b6/petB AMC99_RS13000 PF00032 Cytochrome b(C-terminal)/b6/petD AMC99_RS13005 PF02167 Cytochrome C1 family AMC99_RS13010 PF00156 Phosphoribosyl transferase domain AMC99_RS13015 PF03471 Transporter associated domain AMC99_RS13015 PF00999 Sodium/hydrogen exchanger family AMC99_RS13035 PF02569 Pantoate-beta-alanine ligase AMC99_RS13040 PF13614 AAA domain AMC99_RS13050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMC99_RS13050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMC99_RS13050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMC99_RS13050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMC99_RS13060 PF00270 DEAD/DEAH box helicase AMC99_RS13060 PF08494 DEAD/H associated AMC99_RS13060 PF00271 Helicase conserved C-terminal domain AMC99_RS13070 PF02472 Biopolymer transport protein ExbD/TolR AMC99_RS13075 PF02472 Biopolymer transport protein ExbD/TolR AMC99_RS13080 PF02472 Biopolymer transport protein ExbD/TolR AMC99_RS13085 PF01618 MotA/TolQ/ExbB proton channel family AMC99_RS13090 PF03544 Gram-negative bacterial TonB protein C-terminal AMC99_RS13105 PF01842 ACT domain AMC99_RS13105 PF03447 Homoserine dehydrogenase, NAD binding domain AMC99_RS13105 PF00742 Homoserine dehydrogenase AMC99_RS13115 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AMC99_RS13120 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMC99_RS13120 PF14572 Phosphoribosyl synthetase-associated domain AMC99_RS13130 PF00459 Inositol monophosphatase family AMC99_RS13140 PF01632 Ribosomal protein L35 AMC99_RS13145 PF00453 Ribosomal protein L20 AMC99_RS13165 PF01409 tRNA synthetases class II core domain (F) AMC99_RS13165 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMC99_RS13170 PF03147 Ferredoxin-fold anticodon binding domain AMC99_RS13170 PF03484 tRNA synthetase B5 domain AMC99_RS13170 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMC99_RS13170 PF03483 B3/4 domain AMC99_RS13170 PF01588 Putative tRNA binding domain AMC99_RS13175 PF07715 TonB-dependent Receptor Plug Domain AMC99_RS13175 PF00593 TonB dependent receptor AMC99_RS13185 PF00009 Elongation factor Tu GTP binding domain AMC99_RS13185 PF16658 Class II release factor RF3, C-terminal domain AMC99_RS13185 PF03144 Elongation factor Tu domain 2 AMC99_RS13190 PF00561 alpha/beta hydrolase fold AMC99_RS13205 PF00543 Nitrogen regulatory protein P-II AMC99_RS13210 PF00909 Ammonium Transporter Family AMC99_RS13215 PF07715 TonB-dependent Receptor Plug Domain AMC99_RS13215 PF00593 TonB dependent receptor AMC99_RS13230 PF00732 GMC oxidoreductase AMC99_RS13230 PF05199 GMC oxidoreductase AMC99_RS13235 PF04116 Fatty acid hydroxylase superfamily AMC99_RS13245 PF01546 Peptidase family M20/M25/M40 AMC99_RS13255 PF00313 'Cold-shock' DNA-binding domain AMC99_RS13260 PF00202 Aminotransferase class-III AMC99_RS13265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMC99_RS13265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMC99_RS13270 PF01430 Hsp33 protein AMC99_RS13280 PF06508 Queuosine biosynthesis protein QueC AMC99_RS13290 PF00080 Copper/zinc superoxide dismutase (SODC) AMC99_RS13295 PF00691 OmpA family AMC99_RS13330 PF09335 SNARE associated Golgi protein AMC99_RS13335 PF00027 Cyclic nucleotide-binding domain AMC99_RS13335 PF13545 Crp-like helix-turn-helix domain AMC99_RS13345 PF02566 OsmC-like protein AMC99_RS13350 PF00155 Aminotransferase class I and II AMC99_RS13355 PF00550 Phosphopantetheine attachment site AMC99_RS13360 PF00072 Response regulator receiver domain AMC99_RS13395 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMC99_RS13405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMC99_RS13415 PF03301 Tryptophan 2,3-dioxygenase AMC99_RS13420 PF04199 Putative cyclase AMC99_RS13425 PF00266 Aminotransferase class-V AMC99_RS13435 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMC99_RS13445 PF01923 Cobalamin adenosyltransferase AMC99_RS13450 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMC99_RS13450 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMC99_RS13470 PF00488 MutS domain V AMC99_RS13470 PF05192 MutS domain III AMC99_RS13470 PF01624 MutS domain I AMC99_RS13470 PF05188 MutS domain II AMC99_RS13470 PF05190 MutS family domain IV AMC99_RS13475 PF00390 Malic enzyme, N-terminal domain AMC99_RS13475 PF03949 Malic enzyme, NAD binding domain AMC99_RS13475 PF01515 Phosphate acetyl/butaryl transferase AMC99_RS13480 PF00171 Aldehyde dehydrogenase family AMC99_RS13490 PF00106 short chain dehydrogenase AMC99_RS13495 PF02390 Putative methyltransferase AMC99_RS13500 PF00486 Transcriptional regulatory protein, C terminal AMC99_RS13500 PF00072 Response regulator receiver domain AMC99_RS13510 PF04963 Sigma-54 factor, core binding domain AMC99_RS13510 PF04552 Sigma-54, DNA binding domain AMC99_RS13510 PF00309 Sigma-54 factor, Activator interacting domain (AID) AMC99_RS13515 PF00005 ABC transporter AMC99_RS13525 PF05552 Conserved TM helix AMC99_RS13525 PF00924 Mechanosensitive ion channel AMC99_RS13530 PF00719 Inorganic pyrophosphatase AMC99_RS13540 PF13393 Histidyl-tRNA synthetase AMC99_RS13545 PF00472 RF-1 domain AMC99_RS13545 PF03462 PCRF domain AMC99_RS13550 PF17827 PrmC N-terminal domain AMC99_RS13550 PF05175 Methyltransferase small domain AMC99_RS13560 PF00795 Carbon-nitrogen hydrolase AMC99_RS13565 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMC99_RS13565 PF02772 S-adenosylmethionine synthetase, central domain AMC99_RS13565 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMC99_RS13570 PF02515 CoA-transferase family III AMC99_RS13580 PF01144 Coenzyme A transferase AMC99_RS13590 PF01144 Coenzyme A transferase AMC99_RS13595 PF06480 FtsH Extracellular AMC99_RS13595 PF17862 AAA+ lid domain AMC99_RS13595 PF00004 ATPase family associated with various cellular activities (AAA) AMC99_RS13595 PF01434 Peptidase family M41 AMC99_RS13605 PF13581 Histidine kinase-like ATPase domain AMC99_RS13605 PF07536 HWE histidine kinase AMC99_RS13605 PF13426 PAS domain AMC99_RS13610 PF01612 3'-5' exonuclease AMC99_RS13610 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMC99_RS13610 PF01367 5'-3' exonuclease, C-terminal SAM fold AMC99_RS13610 PF00476 DNA polymerase family A AMC99_RS13635 PF00118 TCP-1/cpn60 chaperonin family AMC99_RS13640 PF00166 Chaperonin 10 Kd subunit AMC99_RS13645 PF01554 MatE AMC99_RS13650 PF00034 Cytochrome c AMC99_RS13655 PF00542 Ribosomal protein L7/L12 C-terminal domain AMC99_RS13655 PF16320 Ribosomal protein L7/L12 dimerisation domain AMC99_RS13660 PF00466 Ribosomal protein L10 AMC99_RS13680 PF13443 Cro/C1-type HTH DNA-binding domain AMC99_RS13690 PF04563 RNA polymerase beta subunit AMC99_RS13690 PF04561 RNA polymerase Rpb2, domain 2 AMC99_RS13690 PF04565 RNA polymerase Rpb2, domain 3 AMC99_RS13690 PF00562 RNA polymerase Rpb2, domain 6 AMC99_RS13690 PF10385 RNA polymerase beta subunit external 1 domain AMC99_RS13690 PF04560 RNA polymerase Rpb2, domain 7 AMC99_RS13695 PF04997 RNA polymerase Rpb1, domain 1 AMC99_RS13695 PF00623 RNA polymerase Rpb1, domain 2 AMC99_RS13695 PF04998 RNA polymerase Rpb1, domain 5 AMC99_RS13695 PF05000 RNA polymerase Rpb1, domain 4 AMC99_RS13695 PF04983 RNA polymerase Rpb1, domain 3 AMC99_RS13710 PF00144 Beta-lactamase AMC99_RS13715 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMC99_RS13720 PF00850 Histone deacetylase domain AMC99_RS13730 PF02887 Pyruvate kinase, alpha/beta domain AMC99_RS13730 PF00224 Pyruvate kinase, barrel domain AMC99_RS13740 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) AMC99_RS13745 PF01906 Putative heavy-metal-binding