AMC99_RS00045	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AMC99_RS00045	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AMC99_RS00045	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AMC99_RS00045	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AMC99_RS00045	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AMC99_RS00045	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AMC99_RS00045	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AMC99_RS00045	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AMC99_RS00045	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AMC99_RS00045	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AMC99_RS00050	PWY-2941	L-lysine biosynthesis II
AMC99_RS00050	PWY-2942	L-lysine biosynthesis III
AMC99_RS00050	PWY-5097	L-lysine biosynthesis VI
AMC99_RS00050	PWY-6559	spermidine biosynthesis II
AMC99_RS00050	PWY-6562	norspermidine biosynthesis
AMC99_RS00050	PWY-7153	grixazone biosynthesis
AMC99_RS00065	PWY-723	alkylnitronates degradation
AMC99_RS00085	PWY-2201	folate transformations I
AMC99_RS00085	PWY-5497	purine nucleobases degradation II (anaerobic)
AMC99_RS00585	PWY-5101	L-isoleucine biosynthesis II
AMC99_RS00585	PWY-5103	L-isoleucine biosynthesis III
AMC99_RS00585	PWY-5104	L-isoleucine biosynthesis IV
AMC99_RS00585	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMC99_RS00595	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMC99_RS00595	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMC99_RS00595	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMC99_RS00620	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMC99_RS00620	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMC99_RS00620	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMC99_RS00620	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMC99_RS00675	PWY-6823	molybdenum cofactor biosynthesis
AMC99_RS00685	PWY-6823	molybdenum cofactor biosynthesis
AMC99_RS00695	PWY-6823	molybdenum cofactor biosynthesis
AMC99_RS00710	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMC99_RS00710	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMC99_RS00755	PWY-5642	2,4-dinitrotoluene degradation
AMC99_RS00755	PWY-6373	acrylate degradation
AMC99_RS00790	PWY-1881	formate oxidation to CO<sub>2</sub>
AMC99_RS00790	PWY-5497	purine nucleobases degradation II (anaerobic)
AMC99_RS00790	PWY-6696	oxalate degradation III
AMC99_RS00905	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
AMC99_RS00915	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMC99_RS00915	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMC99_RS00915	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMC99_RS00915	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMC99_RS01010	PWY-6556	pyrimidine ribonucleosides salvage II
AMC99_RS01010	PWY-7181	pyrimidine deoxyribonucleosides degradation
AMC99_RS01010	PWY-7193	pyrimidine ribonucleosides salvage I
AMC99_RS01010	PWY-7199	pyrimidine deoxyribonucleosides salvage
AMC99_RS01030	PWY-3821	galactose degradation III
AMC99_RS01030	PWY-6317	galactose degradation I (Leloir pathway)
AMC99_RS01030	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AMC99_RS01030	PWY-6527	stachyose degradation
AMC99_RS01030	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AMC99_RS01030	PWY-7344	UDP-D-galactose biosynthesis
AMC99_RS01135	PWY-2941	L-lysine biosynthesis II
AMC99_RS01135	PWY-2942	L-lysine biosynthesis III
AMC99_RS01135	PWY-5097	L-lysine biosynthesis VI
AMC99_RS01150	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMC99_RS01180	PWY-5839	menaquinol-7 biosynthesis
AMC99_RS01180	PWY-5844	menaquinol-9 biosynthesis
AMC99_RS01180	PWY-5849	menaquinol-6 biosynthesis
AMC99_RS01180	PWY-5890	menaquinol-10 biosynthesis
AMC99_RS01180	PWY-5891	menaquinol-11 biosynthesis
AMC99_RS01180	PWY-5892	menaquinol-12 biosynthesis
AMC99_RS01180	PWY-5895	menaquinol-13 biosynthesis
AMC99_RS01205	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMC99_RS01205	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMC99_RS01205	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMC99_RS01205	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMC99_RS01270	PWY-5506	methanol oxidation to formaldehyde IV
AMC99_RS01290	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMC99_RS01435	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AMC99_RS01475	PWY-6910	hydroxymethylpyrimidine salvage
AMC99_RS01475	PWY-7356	thiamin salvage IV (yeast)
AMC99_RS01475	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AMC99_RS01485	PWY-6749	CMP-legionaminate biosynthesis I
AMC99_RS01495	PWY-6854	ethylene biosynthesis III (microbes)
AMC99_RS01625	PWY-2201	folate transformations I
AMC99_RS01625	PWY-3841	folate transformations II
AMC99_RS01635	PWY-2201	folate transformations I
AMC99_RS01635	PWY-3841	folate transformations II
AMC99_RS01750	PWY-3781	aerobic respiration I (cytochrome c)
AMC99_RS01750	PWY-4521	arsenite oxidation I (respiratory)
AMC99_RS01750	PWY-6692	Fe(II) oxidation
AMC99_RS01750	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMC99_RS01755	PWY-3781	aerobic respiration I (cytochrome c)
AMC99_RS01755	PWY-4521	arsenite oxidation I (respiratory)
AMC99_RS01755	PWY-6692	Fe(II) oxidation
AMC99_RS01755	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMC99_RS01800	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMC99_RS01800	PWY-6855	chitin degradation I (archaea)
AMC99_RS01800	PWY-6906	chitin derivatives degradation
AMC99_RS01820	PWY-4381	fatty acid biosynthesis initiation I
AMC99_RS01820	PWY-5743	3-hydroxypropanoate cycle
AMC99_RS01820	PWY-5744	glyoxylate assimilation
AMC99_RS01820	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMC99_RS01820	PWY-6679	jadomycin biosynthesis
AMC99_RS01820	PWY-6722	candicidin biosynthesis
AMC99_RS01820	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMC99_RS01890	PWY-723	alkylnitronates degradation
AMC99_RS01925	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AMC99_RS02000	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMC99_RS02015	PWY-7533	gliotoxin biosynthesis
AMC99_RS02080	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMC99_RS02200	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AMC99_RS02200	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AMC99_RS02320	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMC99_RS02320	PWY-5109	2-methylbutanoate biosynthesis
AMC99_RS02320	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AMC99_RS02320	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AMC99_RS02320	PWY-5177	glutaryl-CoA degradation
AMC99_RS02320	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMC99_RS02320	PWY-6435	4-hydroxybenzoate biosynthesis V
AMC99_RS02320	PWY-6583	pyruvate fermentation to butanol I
AMC99_RS02320	PWY-6863	pyruvate fermentation to hexanol
AMC99_RS02320	PWY-6883	pyruvate fermentation to butanol II
AMC99_RS02320	PWY-6944	androstenedione degradation
AMC99_RS02320	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMC99_RS02320	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMC99_RS02320	PWY-7007	methyl ketone biosynthesis
AMC99_RS02320	PWY-7046	4-coumarate degradation (anaerobic)
AMC99_RS02320	PWY-7094	fatty acid salvage
AMC99_RS02320	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMC99_RS02320	PWY-735	jasmonic acid biosynthesis
AMC99_RS02320	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AMC99_RS02320	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AMC99_RS02320	PWY-7726	AMC99_RS02320
AMC99_RS02385	PWY-5515	L-arabinose degradation II
AMC99_RS02385	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AMC99_RS02385	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AMC99_RS02445	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
AMC99_RS02445	PWY-7248	pectin degradation III
AMC99_RS02450	PWY-6531	mannitol cycle
AMC99_RS02500	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AMC99_RS02500	PWY-7118	chitin degradation to ethanol
AMC99_RS02510	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AMC99_RS02510	PWY-7118	chitin degradation to ethanol
AMC99_RS02600	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AMC99_RS02600	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AMC99_RS02600	PWY-6896	thiamin salvage I
AMC99_RS02600	PWY-6897	thiamin salvage II
AMC99_RS02680	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
AMC99_RS02730	PWY-6012	acyl carrier protein metabolism I
AMC99_RS02730	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AMC99_RS02740	PWY-5686	UMP biosynthesis
AMC99_RS02750	PWY-3781	aerobic respiration I (cytochrome c)
AMC99_RS02750	PWY-4521	arsenite oxidation I (respiratory)
AMC99_RS02750	PWY-6692	Fe(II) oxidation
AMC99_RS02750	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMC99_RS02800	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMC99_RS02800	PWY-6148	tetrahydromethanopterin biosynthesis
AMC99_RS02800	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AMC99_RS02800	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMC99_RS02810	PWY-6823	molybdenum cofactor biosynthesis
AMC99_RS02820	PWY-6823	molybdenum cofactor biosynthesis
AMC99_RS02870	PWY-5686	UMP biosynthesis
AMC99_RS02930	PWY-6840	homoglutathione biosynthesis
AMC99_RS02930	PWY-7255	ergothioneine biosynthesis I (bacteria)
AMC99_RS02935	PWY-2201	folate transformations I
AMC99_RS03040	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMC99_RS03060	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMC99_RS03060	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMC99_RS03150	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMC99_RS03150	PWY-6416	quinate degradation II
AMC99_RS03150	PWY-6707	gallate biosynthesis
AMC99_RS03235	PWY-3461	L-tyrosine biosynthesis II
AMC99_RS03235	PWY-3462	L-phenylalanine biosynthesis II
AMC99_RS03235	PWY-6120	L-tyrosine biosynthesis III
AMC99_RS03235	PWY-6627	salinosporamide A biosynthesis
AMC99_RS03235	PWY-7626	bacilysin biosynthesis
AMC99_RS03310	PWY-4381	fatty acid biosynthesis initiation I
AMC99_RS03320	PWY-5669	phosphatidylethanolamine biosynthesis I
AMC99_RS03325	PWY-5669	phosphatidylethanolamine biosynthesis I
AMC99_RS03360	PWY-5667	CDP-diacylglycerol biosynthesis I
AMC99_RS03360	PWY-5981	CDP-diacylglycerol biosynthesis III
AMC99_RS03365	PWY-7294	xylose degradation IV
AMC99_RS03365	PWY-7295	L-arabinose degradation IV
AMC99_RS03365	PWY-7560	methylerythritol phosphate pathway II
AMC99_RS03385	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMC99_RS03385	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMC99_RS03385	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMC99_RS03385	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMC99_RS03385	PWY-6113	superpathway of mycolate biosynthesis
AMC99_RS03385	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMC99_RS03385	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMC99_RS03385	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMC99_RS03385	PWY-7663	gondoate biosynthesis (anaerobic)
AMC99_RS03385	PWY-7664	oleate biosynthesis IV (anaerobic)
AMC99_RS03385	PWYG-321	mycolate biosynthesis
AMC99_RS03475	PWY-2941	L-lysine biosynthesis II
AMC99_RS03475	PWY-5097	L-lysine biosynthesis VI
AMC99_RS03500	PWY-5269	cardiolipin biosynthesis II
AMC99_RS03500	PWY-5668	cardiolipin biosynthesis I
AMC99_RS03575	PWY-7199	pyrimidine deoxyribonucleosides salvage
AMC99_RS03585	PWY-4261	glycerol degradation I
AMC99_RS03585	PWY-6118	glycerol-3-phosphate shuttle
AMC99_RS03585	PWY-6952	glycerophosphodiester degradation
AMC99_RS03695	PWY-5350	thiosulfate disproportionation III (rhodanese)
AMC99_RS03895	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMC99_RS03895	PWY-3162	L-tryptophan degradation V (side chain pathway)
AMC99_RS03895	PWY-5057	L-valine degradation II
AMC99_RS03895	PWY-5076	L-leucine degradation III
AMC99_RS03895	PWY-5078	L-isoleucine degradation II
AMC99_RS03895	PWY-5079	L-phenylalanine degradation III
AMC99_RS03895	PWY-5082	L-methionine degradation III
AMC99_RS03895	PWY-5480	pyruvate fermentation to ethanol I
AMC99_RS03895	PWY-5486	pyruvate fermentation to ethanol II
AMC99_RS03895	PWY-5751	phenylethanol biosynthesis
AMC99_RS03895	PWY-6313	serotonin degradation
AMC99_RS03895	PWY-6333	acetaldehyde biosynthesis I
AMC99_RS03895	PWY-6342	noradrenaline and adrenaline degradation
AMC99_RS03895	PWY-6454	vancomycin resistance I
AMC99_RS03895	PWY-6587	pyruvate fermentation to ethanol III
AMC99_RS03895	PWY-6802	salidroside biosynthesis
AMC99_RS03895	PWY-6871	3-methylbutanol biosynthesis
AMC99_RS03895	PWY-6901	superpathway of glucose and xylose degradation
AMC99_RS03895	PWY-7013	L-1,2-propanediol degradation
AMC99_RS03895	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMC99_RS03895	PWY-7118	chitin degradation to ethanol
AMC99_RS03895	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AMC99_RS03905	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMC99_RS03955	PWY-5667	CDP-diacylglycerol biosynthesis I
AMC99_RS03955	PWY-5981	CDP-diacylglycerol biosynthesis III
AMC99_RS03960	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AMC99_RS03960	PWY-5368	dimorphecolate biosynthesis
AMC99_RS03960	PWY-5995	linoleate biosynthesis I (plants)
AMC99_RS03960	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AMC99_RS03960	PWY-6803	phosphatidylcholine acyl editing
AMC99_RS03960	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AMC99_RS03960	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AMC99_RS03960	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AMC99_RS03960	PWY-7470	phosphatidylcholine biosynthesis VII
AMC99_RS03960	PWY-7618	ricinoleate biosynthesis
AMC99_RS03965	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMC99_RS03965	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMC99_RS03970	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMC99_RS03970	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMC99_RS04170	PWY-6728	methylaspartate cycle
AMC99_RS04170	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMC99_RS04170	PWY-7118	chitin degradation to ethanol
AMC99_RS04170	PWY-7294	xylose degradation IV
AMC99_RS04170	PWY-7295	L-arabinose degradation IV
AMC99_RS04185	PWY-7294	xylose degradation IV
AMC99_RS04185	PWY-7295	L-arabinose degradation IV
AMC99_RS04215	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMC99_RS04215	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AMC99_RS04215	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMC99_RS04215	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMC99_RS04215	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AMC99_RS04215	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMC99_RS04215	PWY-7205	CMP phosphorylation
AMC99_RS04215	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMC99_RS04215	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMC99_RS04215	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMC99_RS04215	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMC99_RS04215	PWY-7224	purine deoxyribonucleosides salvage
AMC99_RS04215	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMC99_RS04215	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMC99_RS04230	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMC99_RS04230	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AMC99_RS04235	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMC99_RS04235	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMC99_RS04235	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMC99_RS04250	PWY-6936	seleno-amino acid biosynthesis
AMC99_RS04250	PWY-7274	D-cycloserine biosynthesis
AMC99_RS04270	PWY-5278	sulfite oxidation III
AMC99_RS04270	PWY-5340	sulfate activation for sulfonation
AMC99_RS04270	PWY-6683	sulfate reduction III (assimilatory)
AMC99_RS04270	PWY-6932	selenate reduction
AMC99_RS04275	PWY-5278	sulfite oxidation III
AMC99_RS04275	PWY-5340	sulfate activation for sulfonation
AMC99_RS04275	PWY-6683	sulfate reduction III (assimilatory)
AMC99_RS04275	PWY-6932	selenate reduction
AMC99_RS04335	PWY-6562	norspermidine biosynthesis
AMC99_RS04370	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMC99_RS04370	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
AMC99_RS04375	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMC99_RS04375	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMC99_RS04435	PWY-3801	sucrose degradation II (sucrose synthase)
AMC99_RS04435	PWY-5054	sorbitol biosynthesis I
AMC99_RS04435	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AMC99_RS04435	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMC99_RS04435	PWY-5659	GDP-mannose biosynthesis
AMC99_RS04435	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMC99_RS04435	PWY-621	sucrose degradation III (sucrose invertase)
AMC99_RS04435	PWY-622	starch biosynthesis
AMC99_RS04435	PWY-6981	chitin biosynthesis
AMC99_RS04435	PWY-6992	1,5-anhydrofructose degradation
AMC99_RS04435	PWY-7238	sucrose biosynthesis II
AMC99_RS04435	PWY-7347	sucrose biosynthesis III
AMC99_RS04435	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMC99_RS04465	PWY-4381	fatty acid biosynthesis initiation I
AMC99_RS04465	PWY-5743	3-hydroxypropanoate cycle
AMC99_RS04465	PWY-5744	glyoxylate assimilation
AMC99_RS04465	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMC99_RS04465	PWY-6679	jadomycin biosynthesis
AMC99_RS04465	PWY-6722	candicidin biosynthesis
AMC99_RS04465	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMC99_RS04475	PWY-5741	ethylmalonyl-CoA pathway
AMC99_RS04475	PWY-5743	3-hydroxypropanoate cycle
AMC99_RS04475	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMC99_RS04475	PWY-6728	methylaspartate cycle
AMC99_RS04475	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMC99_RS04495	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AMC99_RS04520	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AMC99_RS04520	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AMC99_RS04520	PWY-7717	AMC99_RS04520
AMC99_RS04520	PWY-7733	AMC99_RS04520
AMC99_RS04520	PWY-7734	AMC99_RS04520
AMC99_RS04525	PWY-6164	3-dehydroquinate biosynthesis I
AMC99_RS04530	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMC99_RS04545	PWY-4381	fatty acid biosynthesis initiation I
AMC99_RS04545	PWY-5743	3-hydroxypropanoate cycle
AMC99_RS04545	PWY-5744	glyoxylate assimilation
AMC99_RS04545	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMC99_RS04545	PWY-6679	jadomycin biosynthesis
AMC99_RS04545	PWY-6722	candicidin biosynthesis
AMC99_RS04545	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMC99_RS04580	PWY-3561	choline biosynthesis III
AMC99_RS04580	PWY-7039	phosphatidate metabolism, as a signaling molecule
AMC99_RS04585	PWY-5663	tetrahydrobiopterin biosynthesis I
AMC99_RS04585	PWY-5664	tetrahydrobiopterin biosynthesis II
AMC99_RS04585	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMC99_RS04585	PWY-6703	preQ<sub>0</sub> biosynthesis
AMC99_RS04585	PWY-6983	tetrahydrobiopterin biosynthesis III
AMC99_RS04585	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AMC99_RS04600	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMC99_RS04645	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMC99_RS04675	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMC99_RS04675	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMC99_RS04675	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AMC99_RS04725	PWY-3841	folate transformations II
AMC99_RS04725	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMC99_RS04725	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMC99_RS04725	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMC99_RS04725	PWY-7199	pyrimidine deoxyribonucleosides salvage
AMC99_RS04725	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMC99_RS04730	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AMC99_RS04770	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMC99_RS04770	PWY-5723	Rubisco shunt
AMC99_RS04770	PWY-6891	thiazole biosynthesis II (Bacillus)
AMC99_RS04770	PWY-6892	thiazole biosynthesis I (E. coli)
AMC99_RS04770	PWY-6901	superpathway of glucose and xylose degradation
AMC99_RS04770	PWY-7560	methylerythritol phosphate pathway II
AMC99_RS04775	PWY-1042	glycolysis IV (plant cytosol)
AMC99_RS04775	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMC99_RS04775	PWY-6901	superpathway of glucose and xylose degradation
AMC99_RS04775	PWY-7003	glycerol degradation to butanol
AMC99_RS04780	PWY-1042	glycolysis IV (plant cytosol)
AMC99_RS04780	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMC99_RS04780	PWY-6886	1-butanol autotrophic biosynthesis
AMC99_RS04780	PWY-6901	superpathway of glucose and xylose degradation
AMC99_RS04780	PWY-7003	glycerol degradation to butanol
AMC99_RS04790	PWY-1042	glycolysis IV (plant cytosol)
AMC99_RS04790	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMC99_RS04790	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMC99_RS04790	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMC99_RS04790	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMC99_RS04805	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AMC99_RS04805	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AMC99_RS04805	PWY-6897	thiamin salvage II
AMC99_RS04805	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AMC99_RS04805	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AMC99_RS04805	PWY-7356	thiamin salvage IV (yeast)
AMC99_RS04805	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AMC99_RS04835	PWY-2301	<i>myo</i>-inositol biosynthesis
AMC99_RS04835	PWY-4702	phytate degradation I
AMC99_RS04835	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AMC99_RS04855	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMC99_RS04900	PWY-6654	phosphopantothenate biosynthesis III
AMC99_RS05020	PWY-723	alkylnitronates degradation
AMC99_RS05035	PWY-6871	3-methylbutanol biosynthesis
AMC99_RS05065	PWY-5103	L-isoleucine biosynthesis III
AMC99_RS05065	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMC99_RS05070	PWY-5101	L-isoleucine biosynthesis II
AMC99_RS05070	PWY-5103	L-isoleucine biosynthesis III
AMC99_RS05070	PWY-5104	L-isoleucine biosynthesis IV
AMC99_RS05070	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AMC99_RS05070	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AMC99_RS05070	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AMC99_RS05070	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMC99_RS05075	PWY-5101	L-isoleucine biosynthesis II
AMC99_RS05075	PWY-5103	L-isoleucine biosynthesis III
AMC99_RS05075	PWY-5104	L-isoleucine biosynthesis IV
AMC99_RS05075	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AMC99_RS05075	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AMC99_RS05075	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AMC99_RS05075	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMC99_RS05080	PWY-2781	<i>cis</i>-zeatin biosynthesis
AMC99_RS05100	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMC99_RS05100	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMC99_RS05100	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMC99_RS05135	PWY-6700	queuosine biosynthesis
AMC99_RS05155	PWY-6700	queuosine biosynthesis
AMC99_RS05180	PWY-3461	L-tyrosine biosynthesis II
AMC99_RS05180	PWY-3462	L-phenylalanine biosynthesis II
AMC99_RS05180	PWY-6120	L-tyrosine biosynthesis III
AMC99_RS05180	PWY-6406	salicylate biosynthesis I
AMC99_RS05180	PWY-6627	salinosporamide A biosynthesis
AMC99_RS05180	PWY-7626	bacilysin biosynthesis
AMC99_RS05185	PWY-6004	glycine betaine biosynthesis V (from glycine)
AMC99_RS05200	PWY-1622	formaldehyde assimilation I (serine pathway)
AMC99_RS05200	PWY-181	photorespiration
AMC99_RS05200	PWY-2161	folate polyglutamylation
AMC99_RS05200	PWY-2201	folate transformations I
AMC99_RS05200	PWY-3661	glycine betaine degradation I
AMC99_RS05200	PWY-3661-1	glycine betaine degradation II (mammalian)
AMC99_RS05200	PWY-3841	folate transformations II
AMC99_RS05200	PWY-5497	purine nucleobases degradation II (anaerobic)
AMC99_RS05230	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMC99_RS05230	PWY-5686	UMP biosynthesis
AMC99_RS05230	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMC99_RS05240	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMC99_RS05240	PWY-5686	UMP biosynthesis
AMC99_RS05240	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMC99_RS05280	PWY-1042	glycolysis IV (plant cytosol)
AMC99_RS05280	PWY-1622	formaldehyde assimilation I (serine pathway)
AMC99_RS05280	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMC99_RS05280	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMC99_RS05280	PWY-5723	Rubisco shunt
AMC99_RS05280	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMC99_RS05280	PWY-6886	1-butanol autotrophic biosynthesis
AMC99_RS05280	PWY-6901	superpathway of glucose and xylose degradation
AMC99_RS05280	PWY-7003	glycerol degradation to butanol
AMC99_RS05280	PWY-7124	ethylene biosynthesis V (engineered)
AMC99_RS05280	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMC99_RS05295	PWY-6167	flavin biosynthesis II (archaea)
AMC99_RS05295	PWY-6168	flavin biosynthesis III (fungi)
AMC99_RS05300	PWY-6167	flavin biosynthesis II (archaea)
AMC99_RS05300	PWY-6168	flavin biosynthesis III (fungi)
AMC99_RS05300	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMC99_RS05370	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AMC99_RS05410	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMC99_RS05410	PWY-6549	L-glutamine biosynthesis III
AMC99_RS05410	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMC99_RS05410	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMC99_RS05450	PWY-6936	seleno-amino acid biosynthesis
AMC99_RS05545	PWY-2201	folate transformations I
AMC99_RS05580	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMC99_RS05660	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMC99_RS05705	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AMC99_RS05705	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMC99_RS05730	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMC99_RS05730	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMC99_RS05735	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMC99_RS05735	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMC99_RS05735	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMC99_RS05735	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AMC99_RS05735	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMC99_RS05735	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMC99_RS05800	PWY-7560	methylerythritol phosphate pathway II
AMC99_RS05815	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AMC99_RS05815	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AMC99_RS05820	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMC99_RS05820	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMC99_RS05820	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMC99_RS05820	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMC99_RS05935	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AMC99_RS05935	PWY-7177	UTP and CTP dephosphorylation II
AMC99_RS05935	PWY-7185	UTP and CTP dephosphorylation I
AMC99_RS05945	PWY-1042	glycolysis IV (plant cytosol)
AMC99_RS05945	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMC99_RS05945	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMC99_RS05945	PWY-7003	glycerol degradation to butanol
AMC99_RS05955	PWY-5958	acridone alkaloid biosynthesis
AMC99_RS05955	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMC99_RS05955	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMC99_RS05970	PWY-5958	acridone alkaloid biosynthesis
AMC99_RS05970	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMC99_RS05970	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMC99_RS05990	PWY-6823	molybdenum cofactor biosynthesis
AMC99_RS06005	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMC99_RS06055	PWY-3961	phosphopantothenate biosynthesis II
AMC99_RS06070	PWY-3781	aerobic respiration I (cytochrome c)
AMC99_RS06070	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AMC99_RS06070	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMC99_RS06070	PWY-6692	Fe(II) oxidation
AMC99_RS06075	PWY-3781	aerobic respiration I (cytochrome c)
AMC99_RS06075	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AMC99_RS06075	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMC99_RS06075	PWY-6692	Fe(II) oxidation
AMC99_RS06260	PWY-3781	aerobic respiration I (cytochrome c)
AMC99_RS06260	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AMC99_RS06260	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMC99_RS06260	PWY-5690	TCA cycle II (plants and fungi)
AMC99_RS06260	PWY-6728	methylaspartate cycle
AMC99_RS06260	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMC99_RS06260	PWY-7254	TCA cycle VII (acetate-producers)
AMC99_RS06260	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMC99_RS06370	PWY-6938	NADH repair
AMC99_RS06380	PWY-5101	L-isoleucine biosynthesis II
AMC99_RS06380	PWY-5103	L-isoleucine biosynthesis III
AMC99_RS06380	PWY-5104	L-isoleucine biosynthesis IV
AMC99_RS06380	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMC99_RS06390	PWY-7560	methylerythritol phosphate pathway II
AMC99_RS06470	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMC99_RS06470	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMC99_RS06470	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMC99_RS06470	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMC99_RS06515	PWY-5392	reductive TCA cycle II
AMC99_RS06515	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMC99_RS06535	PWY-6825	phosphatidylcholine biosynthesis V
AMC99_RS06540	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMC99_RS06540	PWY-6596	adenosine nucleotides degradation I
AMC99_RS06540	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMC99_RS06595	PWY-3781	aerobic respiration I (cytochrome c)
AMC99_RS06595	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AMC99_RS06595	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMC99_RS06595	PWY-5690	TCA cycle II (plants and fungi)
AMC99_RS06595	PWY-6728	methylaspartate cycle
AMC99_RS06595	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMC99_RS06595	PWY-7254	TCA cycle VII (acetate-producers)
AMC99_RS06595	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMC99_RS06760	PWY-5367	petroselinate biosynthesis
AMC99_RS06760	PWY-5515	L-arabinose degradation II
AMC99_RS06760	PWY-5525	D-glucuronate degradation I
AMC99_RS06760	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMC99_RS06760	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMC99_RS06760	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMC99_RS06760	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMC99_RS06760	PWY-6113	superpathway of mycolate biosynthesis
AMC99_RS06760	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMC99_RS06760	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMC99_RS06760	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMC99_RS06760	PWY-7663	gondoate biosynthesis (anaerobic)
AMC99_RS06760	PWY-7664	oleate biosynthesis IV (anaerobic)
AMC99_RS06760	PWYG-321	mycolate biosynthesis
AMC99_RS06765	PWY-4381	fatty acid biosynthesis initiation I
AMC99_RS06765	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AMC99_RS06765	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMC99_RS06810	PWY-6617	adenosine nucleotides degradation III
AMC99_RS06850	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMC99_RS06875	PWY-4981	L-proline biosynthesis II (from arginine)
AMC99_RS06880	PWY-2941	L-lysine biosynthesis II
AMC99_RS06880	PWY-2942	L-lysine biosynthesis III
AMC99_RS06880	PWY-5097	L-lysine biosynthesis VI
AMC99_RS06880	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMC99_RS06880	PWY-6559	spermidine biosynthesis II
AMC99_RS06880	PWY-6562	norspermidine biosynthesis
AMC99_RS06880	PWY-7153	grixazone biosynthesis
AMC99_RS06880	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMC99_RS06895	PWY-6829	tRNA methylation (yeast)
AMC99_RS06895	PWY-7285	methylwyosine biosynthesis
AMC99_RS06895	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AMC99_RS06935	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMC99_RS06945	PWY-7205	CMP phosphorylation
AMC99_RS06960	PWY-5386	methylglyoxal degradation I
AMC99_RS07015	PWY-6123	inosine-5'-phosphate biosynthesis I
AMC99_RS07015	PWY-6124	inosine-5'-phosphate biosynthesis II
AMC99_RS07015	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMC99_RS07015	PWY-7234	inosine-5'-phosphate biosynthesis III
AMC99_RS07025	PWY-5686	UMP biosynthesis
AMC99_RS07050	PWY-4381	fatty acid biosynthesis initiation I
AMC99_RS07050	PWY-5743	3-hydroxypropanoate cycle
AMC99_RS07050	PWY-5744	glyoxylate assimilation
AMC99_RS07050	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMC99_RS07050	PWY-6679	jadomycin biosynthesis
AMC99_RS07050	PWY-6722	candicidin biosynthesis
AMC99_RS07050	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMC99_RS07055	PWY-2161	folate polyglutamylation
AMC99_RS07075	PWY-6825	phosphatidylcholine biosynthesis V
AMC99_RS07125	PWY-5913	TCA cycle VI (obligate autotrophs)
AMC99_RS07125	PWY-6549	L-glutamine biosynthesis III
AMC99_RS07125	PWY-6728	methylaspartate cycle
AMC99_RS07125	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMC99_RS07125	PWY-7124	ethylene biosynthesis V (engineered)
AMC99_RS07125	PWY-7254	TCA cycle VII (acetate-producers)
AMC99_RS07125	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMC99_RS07175	PWY-2941	L-lysine biosynthesis II
AMC99_RS07175	PWY-2942	L-lysine biosynthesis III
AMC99_RS07175	PWY-5097	L-lysine biosynthesis VI
AMC99_RS07200	PWY-2201	folate transformations I
AMC99_RS07250	PWY-4983	L-citrulline-nitric oxide cycle
AMC99_RS07250	PWY-4984	urea cycle
AMC99_RS07250	PWY-5	canavanine biosynthesis
AMC99_RS07250	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMC99_RS07250	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMC99_RS07345	PWY-1622	formaldehyde assimilation I (serine pathway)
AMC99_RS07345	PWY-5392	reductive TCA cycle II
AMC99_RS07345	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMC99_RS07345	PWY-5690	TCA cycle II (plants and fungi)
AMC99_RS07345	PWY-5913	TCA cycle VI (obligate autotrophs)
AMC99_RS07345	PWY-6728	methylaspartate cycle
AMC99_RS07345	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMC99_RS07345	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMC99_RS07345	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMC99_RS07350	PWY-5392	reductive TCA cycle II
AMC99_RS07350	PWY-5537	pyruvate fermentation to acetate V
AMC99_RS07350	PWY-5538	pyruvate fermentation to acetate VI
AMC99_RS07350	PWY-5690	TCA cycle II (plants and fungi)
AMC99_RS07350	PWY-5913	TCA cycle VI (obligate autotrophs)
AMC99_RS07350	PWY-6728	methylaspartate cycle
AMC99_RS07350	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMC99_RS07350	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMC99_RS07355	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMC99_RS07360	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMC99_RS07365	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AMC99_RS07365	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMC99_RS07390	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMC99_RS07435	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMC99_RS07725	PWY-822	fructan biosynthesis
AMC99_RS07735	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AMC99_RS07765	PWY-5057	L-valine degradation II
AMC99_RS07765	PWY-5076	L-leucine degradation III
AMC99_RS07765	PWY-5078	L-isoleucine degradation II
AMC99_RS07765	PWY-5101	L-isoleucine biosynthesis II
AMC99_RS07765	PWY-5103	L-isoleucine biosynthesis III
AMC99_RS07765	PWY-5104	L-isoleucine biosynthesis IV
AMC99_RS07765	PWY-5108	L-isoleucine biosynthesis V
AMC99_RS07780	PWY-5381	pyridine nucleotide cycling (plants)
AMC99_RS07780	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AMC99_RS07810	PWY-7255	ergothioneine biosynthesis I (bacteria)
AMC99_RS07820	PWY-6164	3-dehydroquinate biosynthesis I
AMC99_RS07840	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AMC99_RS07840	PWY-5368	dimorphecolate biosynthesis
AMC99_RS07840	PWY-5995	linoleate biosynthesis I (plants)
AMC99_RS07840	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AMC99_RS07840	PWY-6803	phosphatidylcholine acyl editing
AMC99_RS07840	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AMC99_RS07840	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AMC99_RS07840	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AMC99_RS07840	PWY-7470	phosphatidylcholine biosynthesis VII
AMC99_RS07840	PWY-7618	ricinoleate biosynthesis
AMC99_RS07930	PWY-5381	pyridine nucleotide cycling (plants)
AMC99_RS07970	PWY-5839	menaquinol-7 biosynthesis
AMC99_RS07970	PWY-5844	menaquinol-9 biosynthesis
AMC99_RS07970	PWY-5849	menaquinol-6 biosynthesis
AMC99_RS07970	PWY-5890	menaquinol-10 biosynthesis
AMC99_RS07970	PWY-5891	menaquinol-11 biosynthesis
AMC99_RS07970	PWY-5892	menaquinol-12 biosynthesis
AMC99_RS07970	PWY-5895	menaquinol-13 biosynthesis
AMC99_RS07985	PWY-4381	fatty acid biosynthesis initiation I
AMC99_RS08055	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
AMC99_RS08060	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMC99_RS08060	PWY-5723	Rubisco shunt
AMC99_RS08120	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMC99_RS08130	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMC99_RS08170	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMC99_RS08170	PWY-5667	CDP-diacylglycerol biosynthesis I
AMC99_RS08170	PWY-6453	stigma estolide biosynthesis
AMC99_RS08170	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AMC99_RS08170	PWY-7587	oleate biosynthesis III (cyanobacteria)
AMC99_RS08395	PWY-6123	inosine-5'-phosphate biosynthesis I
AMC99_RS08395	PWY-6124	inosine-5'-phosphate biosynthesis II
AMC99_RS08395	PWY-7234	inosine-5'-phosphate biosynthesis III
AMC99_RS08415	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMC99_RS08415	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMC99_RS08415	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMC99_RS08420	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMC99_RS08420	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMC99_RS08420	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMC99_RS08430	PWY-6749	CMP-legionaminate biosynthesis I
AMC99_RS08505	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMC99_RS08505	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMC99_RS08550	PWY-6614	tetrahydrofolate biosynthesis
AMC99_RS08625	PWY-6823	molybdenum cofactor biosynthesis
AMC99_RS08625	PWY-6891	thiazole biosynthesis II (Bacillus)
AMC99_RS08625	PWY-6892	thiazole biosynthesis I (E. coli)
AMC99_RS08625	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AMC99_RS08630	PWY-6823	molybdenum cofactor biosynthesis
AMC99_RS08630	PWY-6891	thiazole biosynthesis II (Bacillus)
AMC99_RS08630	PWY-6892	thiazole biosynthesis I (E. coli)
AMC99_RS08630	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AMC99_RS08660	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMC99_RS08660	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMC99_RS08765	PWY-4983	L-citrulline-nitric oxide cycle
AMC99_RS08765	PWY-4984	urea cycle
AMC99_RS08765	PWY-5	canavanine biosynthesis
AMC99_RS08765	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMC99_RS08765	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMC99_RS08775	PWY-2941	L-lysine biosynthesis II
AMC99_RS08775	PWY-2942	L-lysine biosynthesis III
AMC99_RS08775	PWY-5097	L-lysine biosynthesis VI
AMC99_RS08780	PWY-5194	siroheme biosynthesis
AMC99_RS08780	PWY-5441	S-methyl-L-methionine cycle
AMC99_RS08780	PWY-702	L-methionine biosynthesis II
AMC99_RS08780	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMC99_RS08795	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMC99_RS08970	PWY-6700	queuosine biosynthesis
AMC99_RS08985	PWY-5350	thiosulfate disproportionation III (rhodanese)
AMC99_RS08990	PWY-6936	seleno-amino acid biosynthesis
AMC99_RS09000	PWY-5194	siroheme biosynthesis
AMC99_RS09000	PWY-5441	S-methyl-L-methionine cycle
AMC99_RS09000	PWY-702	L-methionine biosynthesis II
AMC99_RS09000	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMC99_RS09010	PWY-6683	sulfate reduction III (assimilatory)
AMC99_RS09035	PWY-3341	L-proline biosynthesis III
AMC99_RS09035	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMC99_RS09060	PWY-3341	L-proline biosynthesis III
AMC99_RS09060	PWY-4981	L-proline biosynthesis II (from arginine)
AMC99_RS09060	PWY-6344	L-ornithine degradation II (Stickland reaction)
AMC99_RS09090	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMC99_RS09090	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMC99_RS09100	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMC99_RS09100	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMC99_RS09105	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMC99_RS09105	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMC99_RS09110	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMC99_RS09110	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMC99_RS09110	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMC99_RS09110	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMC99_RS09120	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMC99_RS09120	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMC99_RS09125	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMC99_RS09125	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMC99_RS09125	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMC99_RS09130	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMC99_RS09130	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMC99_RS09150	PWY-2201	folate transformations I
AMC99_RS09195	PWY-7158	L-phenylalanine degradation V
AMC99_RS09235	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMC99_RS09235	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMC99_RS09245	PWY-381	nitrate reduction II (assimilatory)
AMC99_RS09245	PWY-5675	nitrate reduction V (assimilatory)
AMC99_RS09245	PWY-6549	L-glutamine biosynthesis III
AMC99_RS09245	PWY-6963	ammonia assimilation cycle I
AMC99_RS09245	PWY-6964	ammonia assimilation cycle II
AMC99_RS09370	PWY-702	L-methionine biosynthesis II
AMC99_RS09535	PWY-6004	glycine betaine biosynthesis V (from glycine)
AMC99_RS09560	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMC99_RS09635	PWY-6703	preQ<sub>0</sub> biosynthesis
AMC99_RS09690	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AMC99_RS09750	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMC99_RS09780	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMC99_RS09840	PWY-5686	UMP biosynthesis
AMC99_RS09855	PWY-3341	L-proline biosynthesis III
AMC99_RS09855	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMC99_RS09860	PWY-3341	L-proline biosynthesis III
AMC99_RS09860	PWY-4981	L-proline biosynthesis II (from arginine)
AMC99_RS09860	PWY-6344	L-ornithine degradation II (Stickland reaction)
AMC99_RS09865	PWY-3341	L-proline biosynthesis III
AMC99_RS09865	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMC99_RS09885	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AMC99_RS09890	PWY-5381	pyridine nucleotide cycling (plants)
AMC99_RS09890	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMC99_RS09890	PWY-6596	adenosine nucleotides degradation I
AMC99_RS09890	PWY-6606	guanosine nucleotides degradation II
AMC99_RS09890	PWY-6607	guanosine nucleotides degradation I
AMC99_RS09890	PWY-6608	guanosine nucleotides degradation III
AMC99_RS09890	PWY-7185	UTP and CTP dephosphorylation I
AMC99_RS09925	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMC99_RS09930	PWY-5101	L-isoleucine biosynthesis II
AMC99_RS09930	PWY-5103	L-isoleucine biosynthesis III
AMC99_RS09930	PWY-5104	L-isoleucine biosynthesis IV
AMC99_RS09930	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMC99_RS09935	PWY-2722	trehalose degradation IV
AMC99_RS09935	PWY-2723	trehalose degradation V
AMC99_RS09935	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMC99_RS09935	PWY-5661	GDP-glucose biosynthesis
AMC99_RS09935	PWY-621	sucrose degradation III (sucrose invertase)
AMC99_RS09935	PWY-7238	sucrose biosynthesis II
AMC99_RS09935	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMC99_RS09940	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMC99_RS09940	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AMC99_RS09940	PWY-7242	D-fructuronate degradation
AMC99_RS09940	PWY-7310	D-glucosaminate degradation
AMC99_RS09940	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AMC99_RS09945	PWY-1622	formaldehyde assimilation I (serine pathway)
AMC99_RS09945	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMC99_RS09945	PWY-5913	TCA cycle VI (obligate autotrophs)
AMC99_RS09945	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMC99_RS09945	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AMC99_RS09945	PWY-6549	L-glutamine biosynthesis III
AMC99_RS09945	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMC99_RS09945	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMC99_RS09945	PWY-7124	ethylene biosynthesis V (engineered)
AMC99_RS09985	PWY-4261	glycerol degradation I
AMC99_RS10005	PWY-5316	nicotine biosynthesis
AMC99_RS10005	PWY-7342	superpathway of nicotine biosynthesis
AMC99_RS10035	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AMC99_RS10035	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AMC99_RS10460	PWY-5525	D-glucuronate degradation I
AMC99_RS10465	PWY-6167	flavin biosynthesis II (archaea)
AMC99_RS10465	PWY-6168	flavin biosynthesis III (fungi)
AMC99_RS10465	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMC99_RS10485	PWY-5913	TCA cycle VI (obligate autotrophs)
AMC99_RS10485	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AMC99_RS10485	PWY-6638	sulfolactate degradation III
AMC99_RS10485	PWY-6642	(<i>R</i>)-cysteate degradation
AMC99_RS10485	PWY-6643	coenzyme M biosynthesis II
AMC99_RS10485	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMC99_RS10485	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMC99_RS10485	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMC99_RS10595	PWY-3861	mannitol degradation II
AMC99_RS10595	PWY-3881	mannitol biosynthesis
AMC99_RS10595	PWY-5659	GDP-mannose biosynthesis
AMC99_RS10595	PWY-6992	1,5-anhydrofructose degradation
AMC99_RS10595	PWY-7456	mannan degradation
AMC99_RS10595	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AMC99_RS10595	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AMC99_RS10865	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMC99_RS10865	PWY-6148	tetrahydromethanopterin biosynthesis
AMC99_RS10865	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AMC99_RS10865	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMC99_RS10875	PWY-43	putrescine biosynthesis II
AMC99_RS10895	PWY-6825	phosphatidylcholine biosynthesis V
AMC99_RS10975	PWY-5344	L-homocysteine biosynthesis
AMC99_RS10985	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AMC99_RS11030	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AMC99_RS11030	PWY-6853	ethylene biosynthesis II (microbes)
AMC99_RS11030	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMC99_RS11065	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMC99_RS11110	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AMC99_RS11110	PWY-2201	folate transformations I
AMC99_RS11110	PWY-3841	folate transformations II
AMC99_RS11110	PWY-5030	L-histidine degradation III
AMC99_RS11110	PWY-5497	purine nucleobases degradation II (anaerobic)
AMC99_RS11110	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AMC99_RS11120	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMC99_RS11120	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMC99_RS11150	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMC99_RS11150	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMC99_RS11150	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMC99_RS11150	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMC99_RS11150	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMC99_RS11150	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMC99_RS11150	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMC99_RS11150	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMC99_RS11170	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMC99_RS11170	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMC99_RS11170	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMC99_RS11170	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMC99_RS11170	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMC99_RS11170	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMC99_RS11170	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMC99_RS11170	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMC99_RS11185	PWY-5316	nicotine biosynthesis
AMC99_RS11185	PWY-7342	superpathway of nicotine biosynthesis
AMC99_RS11220	PWY-723	alkylnitronates degradation
AMC99_RS11240	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMC99_RS11295	PWY-4381	fatty acid biosynthesis initiation I
AMC99_RS11295	PWY-5743	3-hydroxypropanoate cycle
AMC99_RS11295	PWY-5744	glyoxylate assimilation
AMC99_RS11295	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMC99_RS11295	PWY-6679	jadomycin biosynthesis
AMC99_RS11295	PWY-6722	candicidin biosynthesis
AMC99_RS11295	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMC99_RS11370	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMC99_RS11375	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AMC99_RS11375	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AMC99_RS11375	PWY-6897	thiamin salvage II
AMC99_RS11375	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AMC99_RS11375	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AMC99_RS11375	PWY-7356	thiamin salvage IV (yeast)
AMC99_RS11375	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AMC99_RS11430	PWY-5958	acridone alkaloid biosynthesis
AMC99_RS11430	PWY-6543	4-aminobenzoate biosynthesis
AMC99_RS11430	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMC99_RS11430	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMC99_RS11455	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMC99_RS11455	PWY-5491	diethylphosphate degradation
AMC99_RS11465	PWY-6168	flavin biosynthesis III (fungi)
AMC99_RS11465	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMC99_RS11525	PWY-6134	L-tyrosine biosynthesis IV
AMC99_RS11525	PWY-7158	L-phenylalanine degradation V
AMC99_RS11540	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AMC99_RS11675	PWY-5676	acetyl-CoA fermentation to butanoate II
AMC99_RS11675	PWY-5741	ethylmalonyl-CoA pathway
AMC99_RS11675	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMC99_RS11690	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMC99_RS11690	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMC99_RS11695	PWY-3801	sucrose degradation II (sucrose synthase)
AMC99_RS11695	PWY-6527	stachyose degradation
AMC99_RS11695	PWY-7238	sucrose biosynthesis II
AMC99_RS11695	PWY-7343	UDP-glucose biosynthesis
AMC99_RS11735	PWY-43	putrescine biosynthesis II
AMC99_RS11790	PWY-5022	4-aminobutanoate degradation V
AMC99_RS11790	PWY-6728	methylaspartate cycle
AMC99_RS11790	PWY-7126	ethylene biosynthesis IV
AMC99_RS11805	PWY-6700	queuosine biosynthesis
AMC99_RS11895	PWY-6891	thiazole biosynthesis II (Bacillus)
AMC99_RS11895	PWY-6892	thiazole biosynthesis I (E. coli)
AMC99_RS11895	PWY-7560	methylerythritol phosphate pathway II
AMC99_RS11910	PWY-6123	inosine-5'-phosphate biosynthesis I
AMC99_RS11910	PWY-6124	inosine-5'-phosphate biosynthesis II
AMC99_RS11910	PWY-7234	inosine-5'-phosphate biosynthesis III
AMC99_RS11915	PWY-7651	heparan sulfate degradation
AMC99_RS11920	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMC99_RS11920	PWY-5723	Rubisco shunt
AMC99_RS12060	PWY-5316	nicotine biosynthesis
AMC99_RS12060	PWY-5381	pyridine nucleotide cycling (plants)
AMC99_RS12060	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AMC99_RS12060	PWY-7342	superpathway of nicotine biosynthesis
AMC99_RS12105	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMC99_RS12105	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMC99_RS12105	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMC99_RS12155	PWY-6823	molybdenum cofactor biosynthesis
AMC99_RS12155	PWY-6891	thiazole biosynthesis II (Bacillus)
AMC99_RS12155	PWY-6892	thiazole biosynthesis I (E. coli)
AMC99_RS12155	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AMC99_RS12205	PWY-5686	UMP biosynthesis
AMC99_RS12210	PWY-4041	&gamma;-glutamyl cycle
AMC99_RS12210	PWY-5826	hypoglycin biosynthesis
AMC99_RS12225	PWY-6891	thiazole biosynthesis II (Bacillus)
AMC99_RS12225	PWY-6892	thiazole biosynthesis I (E. coli)
AMC99_RS12300	PWY-5392	reductive TCA cycle II
AMC99_RS12300	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMC99_RS12300	PWY-5690	TCA cycle II (plants and fungi)
AMC99_RS12300	PWY-5913	TCA cycle VI (obligate autotrophs)
AMC99_RS12300	PWY-6728	methylaspartate cycle
AMC99_RS12300	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMC99_RS12300	PWY-7254	TCA cycle VII (acetate-producers)
AMC99_RS12300	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMC99_RS12380	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMC99_RS12395	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AMC99_RS12395	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AMC99_RS12405	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMC99_RS12535	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMC99_RS12535	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMC99_RS12620	PWY-3341	L-proline biosynthesis III
AMC99_RS12620	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMC99_RS12625	PWY-5381	pyridine nucleotide cycling (plants)
AMC99_RS12625	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AMC99_RS12635	PWY-6825	phosphatidylcholine biosynthesis V
AMC99_RS12680	PWY-3221	dTDP-L-rhamnose biosynthesis II
AMC99_RS12680	PWY-6808	dTDP-D-forosamine biosynthesis
AMC99_RS12680	PWY-6942	dTDP-D-desosamine biosynthesis
AMC99_RS12680	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AMC99_RS12680	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AMC99_RS12680	PWY-6974	dTDP-L-olivose biosynthesis
AMC99_RS12680	PWY-6976	dTDP-L-mycarose biosynthesis
AMC99_RS12680	PWY-7104	dTDP-L-megosamine biosynthesis
AMC99_RS12680	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AMC99_RS12680	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AMC99_RS12680	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AMC99_RS12680	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AMC99_RS12680	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AMC99_RS12680	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AMC99_RS12680	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AMC99_RS12680	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AMC99_RS12680	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AMC99_RS12680	PWY-7688	AMC99_RS12680
AMC99_RS12690	PWY-3221	dTDP-L-rhamnose biosynthesis II
AMC99_RS12690	PWY-6808	dTDP-D-forosamine biosynthesis
AMC99_RS12690	PWY-6942	dTDP-D-desosamine biosynthesis
AMC99_RS12690	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AMC99_RS12690	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AMC99_RS12690	PWY-6974	dTDP-L-olivose biosynthesis
AMC99_RS12690	PWY-6976	dTDP-L-mycarose biosynthesis
AMC99_RS12690	PWY-7104	dTDP-L-megosamine biosynthesis
AMC99_RS12690	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AMC99_RS12690	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AMC99_RS12690	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AMC99_RS12690	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AMC99_RS12690	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AMC99_RS12690	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AMC99_RS12690	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AMC99_RS12690	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AMC99_RS12690	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AMC99_RS12690	PWY-7688	AMC99_RS12690
AMC99_RS12780	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMC99_RS12780	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMC99_RS12780	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMC99_RS12780	PWY-6113	superpathway of mycolate biosynthesis
AMC99_RS12780	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMC99_RS12780	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMC99_RS12780	PWY-7663	gondoate biosynthesis (anaerobic)
AMC99_RS12780	PWY-7664	oleate biosynthesis IV (anaerobic)
AMC99_RS12780	PWYG-321	mycolate biosynthesis
AMC99_RS12795	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMC99_RS12795	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMC99_RS12880	PWY-5392	reductive TCA cycle II
AMC99_RS12880	PWY-5537	pyruvate fermentation to acetate V
AMC99_RS12880	PWY-5538	pyruvate fermentation to acetate VI
AMC99_RS12880	PWY-5690	TCA cycle II (plants and fungi)
AMC99_RS12880	PWY-5913	TCA cycle VI (obligate autotrophs)
AMC99_RS12880	PWY-6728	methylaspartate cycle
AMC99_RS12880	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMC99_RS12880	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMC99_RS12915	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AMC99_RS12915	PWY-6167	flavin biosynthesis II (archaea)
AMC99_RS12915	PWY-6168	flavin biosynthesis III (fungi)
AMC99_RS12920	PWY-7533	gliotoxin biosynthesis
AMC99_RS12925	PWY-3841	folate transformations II
AMC99_RS12925	PWY-6614	tetrahydrofolate biosynthesis
AMC99_RS12935	PWY-6123	inosine-5'-phosphate biosynthesis I
AMC99_RS12935	PWY-7234	inosine-5'-phosphate biosynthesis III
AMC99_RS12940	PWY-1622	formaldehyde assimilation I (serine pathway)
AMC99_RS12940	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMC99_RS12995	PWY-3781	aerobic respiration I (cytochrome c)
AMC99_RS12995	PWY-6692	Fe(II) oxidation
AMC99_RS12995	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AMC99_RS12995	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMC99_RS13010	PWY-6605	adenine and adenosine salvage II
AMC99_RS13010	PWY-6610	adenine and adenosine salvage IV
AMC99_RS13050	PWY-6749	CMP-legionaminate biosynthesis I
AMC99_RS13115	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMC99_RS13195	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMC99_RS13195	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMC99_RS13230	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AMC99_RS13230	PWY-7494	choline degradation IV
AMC99_RS13265	PWY-4981	L-proline biosynthesis II (from arginine)
AMC99_RS13265	PWY-4984	urea cycle
AMC99_RS13265	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMC99_RS13280	PWY-6703	preQ<sub>0</sub> biosynthesis
AMC99_RS13290	PWY-6854	ethylene biosynthesis III (microbes)
AMC99_RS13420	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AMC99_RS13420	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AMC99_RS13420	PWY-7717	AMC99_RS13420
AMC99_RS13420	PWY-7733	AMC99_RS13420
AMC99_RS13420	PWY-7734	AMC99_RS13420
AMC99_RS13425	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AMC99_RS13425	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AMC99_RS13445	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMC99_RS13445	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMC99_RS13445	PWY-6268	adenosylcobalamin salvage from cobalamin
AMC99_RS13445	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMC99_RS13450	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMC99_RS13450	PWY-5109	2-methylbutanoate biosynthesis
AMC99_RS13450	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AMC99_RS13450	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AMC99_RS13450	PWY-5177	glutaryl-CoA degradation
AMC99_RS13450	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMC99_RS13450	PWY-6435	4-hydroxybenzoate biosynthesis V
AMC99_RS13450	PWY-6583	pyruvate fermentation to butanol I
AMC99_RS13450	PWY-6863	pyruvate fermentation to hexanol
AMC99_RS13450	PWY-6883	pyruvate fermentation to butanol II
AMC99_RS13450	PWY-6944	androstenedione degradation
AMC99_RS13450	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMC99_RS13450	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMC99_RS13450	PWY-7007	methyl ketone biosynthesis
AMC99_RS13450	PWY-7046	4-coumarate degradation (anaerobic)
AMC99_RS13450	PWY-7094	fatty acid salvage
AMC99_RS13450	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMC99_RS13450	PWY-735	jasmonic acid biosynthesis
AMC99_RS13450	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AMC99_RS13450	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AMC99_RS13450	PWY-7726	AMC99_RS13450
AMC99_RS13475	PWY-1281	sulfoacetaldehyde degradation I
AMC99_RS13475	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMC99_RS13475	PWY-5482	pyruvate fermentation to acetate II
AMC99_RS13475	PWY-5485	pyruvate fermentation to acetate IV
AMC99_RS13475	PWY-5497	purine nucleobases degradation II (anaerobic)
AMC99_RS13475	PWY-6637	sulfolactate degradation II
AMC99_RS13475	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMC99_RS13565	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMC99_RS13565	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AMC99_RS13715	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMC99_RS13730	PWY-1042	glycolysis IV (plant cytosol)
AMC99_RS13730	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMC99_RS13730	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMC99_RS13730	PWY-5723	Rubisco shunt
AMC99_RS13730	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMC99_RS13730	PWY-6886	1-butanol autotrophic biosynthesis
AMC99_RS13730	PWY-6901	superpathway of glucose and xylose degradation
AMC99_RS13730	PWY-7003	glycerol degradation to butanol
AMC99_RS13730	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMC99_RS13730	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMC99_RS13740	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
