AMC99_RS04850 b7af293e96c7faeedc4ae638bfa8c4f0 598 Pfam PF03600 Citrate transporter 19 544 1.0E-33 T 20-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 AMC99_RS04850 b7af293e96c7faeedc4ae638bfa8c4f0 598 PANTHER PTHR10283:SF100 12 227 4.0E-68 T 20-04-2016 AMC99_RS04850 b7af293e96c7faeedc4ae638bfa8c4f0 598 PANTHER PTHR10283:SF100 345 598 4.0E-68 T 20-04-2016 AMC99_RS04850 b7af293e96c7faeedc4ae638bfa8c4f0 598 Gene3D G3DSA:3.30.70.1450 311 395 3.4E-17 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMC99_RS04850 b7af293e96c7faeedc4ae638bfa8c4f0 598 PANTHER PTHR10283 12 227 4.0E-68 T 20-04-2016 AMC99_RS04850 b7af293e96c7faeedc4ae638bfa8c4f0 598 PANTHER PTHR10283 345 598 4.0E-68 T 20-04-2016 AMC99_RS04850 b7af293e96c7faeedc4ae638bfa8c4f0 598 Pfam PF02080 TrkA-C domain 314 387 8.8E-14 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMC99_RS04850 b7af293e96c7faeedc4ae638bfa8c4f0 598 SUPERFAMILY SSF116726 309 391 3.92E-14 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMC99_RS07070 abe3c1a36c670555c1ae84428c6d5654 259 Gene3D G3DSA:3.10.290.10 13 76 6.0E-20 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS07070 abe3c1a36c670555c1ae84428c6d5654 259 SUPERFAMILY SSF55120 72 246 8.63E-40 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS07070 abe3c1a36c670555c1ae84428c6d5654 259 PANTHER PTHR21600:SF2 13 250 1.7E-73 T 20-04-2016 AMC99_RS07070 abe3c1a36c670555c1ae84428c6d5654 259 SMART SM00363 15 73 8.5E-10 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS07070 abe3c1a36c670555c1ae84428c6d5654 259 Pfam PF01479 S4 domain 16 56 1.1E-10 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS07070 abe3c1a36c670555c1ae84428c6d5654 259 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 80 241 3.3E-44 T 20-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMC99_RS07070 abe3c1a36c670555c1ae84428c6d5654 259 Pfam PF00849 RNA pseudouridylate synthase 76 212 2.3E-12 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS07070 abe3c1a36c670555c1ae84428c6d5654 259 SUPERFAMILY SSF55174 11 70 1.96E-11 T 20-04-2016 AMC99_RS07070 abe3c1a36c670555c1ae84428c6d5654 259 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 117 131 - T 20-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMC99_RS07070 abe3c1a36c670555c1ae84428c6d5654 259 PANTHER PTHR21600 13 250 1.7E-73 T 20-04-2016 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 PIRSF PIRSF000006 4 290 1.8E-99 T 20-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 18 62 7.3E-23 T 20-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 SUPERFAMILY SSF46626 209 289 2.82E-23 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 PRINTS PR00605 Class IC cytochrome C signature 217 228 3.6E-6 T 20-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 PRINTS PR00605 Class IC cytochrome C signature 261 283 3.6E-6 T 20-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 PANTHER PTHR33751:SF1 80 293 2.3E-70 T 20-04-2016 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 PANTHER PTHR33751:SF1 6 59 2.3E-70 T 20-04-2016 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 209 283 3.2E-13 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 114 198 1.2E-12 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 Gene3D G3DSA:1.10.760.10 40 62 7.9E-27 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 Gene3D G3DSA:1.10.760.10 109 208 7.9E-27 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 Gene3D G3DSA:1.10.760.10 209 290 2.3E-25 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 10 290 1.1E-97 T 20-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 SUPERFAMILY SSF46626 105 205 7.39E-29 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 SUPERFAMILY SSF46626 35 69 7.39E-29 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 PANTHER PTHR33751 80 293 2.3E-70 T 20-04-2016 AMC99_RS01740 69d1419e523ececacdecc5cef4523e59 311 PANTHER PTHR33751 6 59 2.3E-70 T 20-04-2016 AMC99_RS06300 5b6d08179e536cdd5a39616828f056fb 354 Gene3D G3DSA:3.40.630.30 143 300 1.6E-28 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS06300 5b6d08179e536cdd5a39616828f056fb 354 TIGRFAM TIGR03019 pepcterm_femAB: FemAB-related protein, PEP-CTERM system-associated 29 353 2.8E-95 T 20-04-2016 IPR017469 PEP-CTERM system-associated, FemAB-related AMC99_RS06300 5b6d08179e536cdd5a39616828f056fb 354 Pfam PF13480 Acetyltransferase (GNAT) domain 163 296 1.1E-17 T 20-04-2016 AMC99_RS06300 5b6d08179e536cdd5a39616828f056fb 354 SUPERFAMILY SSF55729 158 307 6.36E-31 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS10600 0bebe193174cdfe73a2a756699fd21e7 191 Gene3D G3DSA:3.10.180.10 6 180 6.7E-46 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS10600 0bebe193174cdfe73a2a756699fd21e7 191 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 122 141 - T 20-04-2016 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 AMC99_RS10600 0bebe193174cdfe73a2a756699fd21e7 191 PANTHER PTHR21366 8 182 3.4E-33 T 20-04-2016 AMC99_RS10600 0bebe193174cdfe73a2a756699fd21e7 191 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 142 7.8E-18 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_RS10600 0bebe193174cdfe73a2a756699fd21e7 191 PANTHER PTHR21366:SF4 8 182 3.4E-33 T 20-04-2016 AMC99_RS10600 0bebe193174cdfe73a2a756699fd21e7 191 SUPERFAMILY SSF54593 9 145 1.61E-37 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS05565 8152439c671c8636f134b64e8f8d0b69 300 SUPERFAMILY SSF56349 4 285 2.33E-45 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMC99_RS05565 8152439c671c8636f134b64e8f8d0b69 300 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 296 28.054 T 20-04-2016 IPR023009 Tyrosine recombinase XerC/XerD AMC99_RS05565 8152439c671c8636f134b64e8f8d0b69 300 Gene3D G3DSA:1.10.150.130 5 88 3.1E-15 T 20-04-2016 IPR023109 Integrase/recombinase, N-terminal AMC99_RS05565 8152439c671c8636f134b64e8f8d0b69 300 Pfam PF00589 Phage integrase family 134 282 9.0E-32 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_RS05565 8152439c671c8636f134b64e8f8d0b69 300 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 88 2.9E-12 T 20-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMC99_RS05565 8152439c671c8636f134b64e8f8d0b69 300 PANTHER PTHR30349 5 298 5.2E-69 T 20-04-2016 AMC99_RS05565 8152439c671c8636f134b64e8f8d0b69 300 Gene3D G3DSA:1.10.443.10 114 285 2.4E-43 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_RS05565 8152439c671c8636f134b64e8f8d0b69 300 PANTHER PTHR30349:SF5 5 298 5.2E-69 T 20-04-2016 AMC99_RS10745 fe4f0b0d612b6a3cb42721fc697e9616 132 PANTHER PTHR12910 1 131 4.9E-25 T 20-04-2016 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 AMC99_RS10745 fe4f0b0d612b6a3cb42721fc697e9616 132 PANTHER PTHR12910:SF3 1 131 4.9E-25 T 20-04-2016 AMC99_RS10745 fe4f0b0d612b6a3cb42721fc697e9616 132 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 26 130 1.0E-23 T 20-04-2016 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 AMC99_RS03985 bae740adeebbf8c0a8da13e0868add7f 684 Pfam PF13899 Thioredoxin-like 582 662 3.0E-12 T 20-04-2016 AMC99_RS03985 bae740adeebbf8c0a8da13e0868add7f 684 Gene3D G3DSA:3.40.30.10 575 674 5.1E-11 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS03985 bae740adeebbf8c0a8da13e0868add7f 684 SUPERFAMILY SSF52833 580 680 1.69E-11 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS03985 bae740adeebbf8c0a8da13e0868add7f 684 PANTHER PTHR32234 1 680 1.2E-111 T 20-04-2016 AMC99_RS03985 bae740adeebbf8c0a8da13e0868add7f 684 Pfam PF11412 Disulphide bond corrector protein DsbC 47 156 3.0E-17 T 20-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AMC99_RS03985 bae740adeebbf8c0a8da13e0868add7f 684 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 301 469 2.3E-8 T 20-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AMC99_RS03985 bae740adeebbf8c0a8da13e0868add7f 684 PANTHER PTHR32234:SF3 1 680 1.2E-111 T 20-04-2016 AMC99_RS02520 6821641b48f1f4eba29c5101351dfbbf 59 Gene3D G3DSA:3.30.50.10 2 50 7.0E-18 T 20-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 AMC99_RS02520 6821641b48f1f4eba29c5101351dfbbf 59 SUPERFAMILY SSF57716 3 49 2.14E-14 T 20-04-2016 AMC99_RS02520 6821641b48f1f4eba29c5101351dfbbf 59 Pfam PF03884 Domain of unknown function (DUF329) 4 48 7.3E-13 T 20-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AMC99_RS12550 b422b0e10e1597f50706d7b82e394266 193 PANTHER PTHR13061:SF11 10 182 3.6E-63 T 20-04-2016 AMC99_RS12550 b422b0e10e1597f50706d7b82e394266 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 19 51 4.7E-6 T 20-04-2016 IPR001451 Hexapeptide repeat AMC99_RS12550 b422b0e10e1597f50706d7b82e394266 193 PANTHER PTHR13061 10 182 3.6E-63 T 20-04-2016 AMC99_RS12550 b422b0e10e1597f50706d7b82e394266 193 Gene3D G3DSA:2.160.10.10 17 183 1.5E-37 T 20-04-2016 AMC99_RS12550 b422b0e10e1597f50706d7b82e394266 193 SUPERFAMILY SSF51161 13 184 4.85E-40 T 20-04-2016 IPR011004 Trimeric LpxA-like AMC99_RS06150 dbc0e46d6621e5a50c843a6497884e79 399 ProSitePatterns PS00099 Thiolases active site. 379 392 - T 20-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AMC99_RS06150 dbc0e46d6621e5a50c843a6497884e79 399 PIRSF PIRSF000429 5 399 3.7E-113 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMC99_RS06150 dbc0e46d6621e5a50c843a6497884e79 399 Gene3D G3DSA:3.40.47.10 10 129 1.8E-65 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS06150 dbc0e46d6621e5a50c843a6497884e79 399 Gene3D G3DSA:3.40.47.10 201 281 1.8E-65 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS06150 dbc0e46d6621e5a50c843a6497884e79 399 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 90 108 - T 20-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 AMC99_RS06150 dbc0e46d6621e5a50c843a6497884e79 399 Gene3D G3DSA:3.40.47.10 148 200 2.1E-56 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS06150 dbc0e46d6621e5a50c843a6497884e79 399 Gene3D G3DSA:3.40.47.10 282 397 2.1E-56 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS06150 dbc0e46d6621e5a50c843a6497884e79 399 Pfam PF02803 Thiolase, C-terminal domain 276 396 3.0E-45 T 20-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AMC99_RS06150 dbc0e46d6621e5a50c843a6497884e79 399 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 12 396 1.1E-123 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMC99_RS06150 dbc0e46d6621e5a50c843a6497884e79 399 PANTHER PTHR18919:SF110 7 399 2.1E-206 T 20-04-2016 AMC99_RS06150 dbc0e46d6621e5a50c843a6497884e79 399 SUPERFAMILY SSF53901 10 274 7.27E-71 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS06150 dbc0e46d6621e5a50c843a6497884e79 399 Pfam PF00108 Thiolase, N-terminal domain 10 267 3.5E-79 T 20-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AMC99_RS06150 dbc0e46d6621e5a50c843a6497884e79 399 SUPERFAMILY SSF53901 276 397 2.56E-41 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS06150 dbc0e46d6621e5a50c843a6497884e79 399 PANTHER PTHR18919 7 399 2.1E-206 T 20-04-2016 AMC99_RS06260 16221f0bcb94223c8fc7c8427377759d 260 PANTHER PTHR11921:SF27 14 258 9.4E-169 T 20-04-2016 AMC99_RS06260 16221f0bcb94223c8fc7c8427377759d 260 Gene3D G3DSA:1.10.1060.10 130 258 2.3E-49 T 20-04-2016 AMC99_RS06260 16221f0bcb94223c8fc7c8427377759d 260 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 252 1.0E-85 T 20-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AMC99_RS06260 16221f0bcb94223c8fc7c8427377759d 260 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_RS06260 16221f0bcb94223c8fc7c8427377759d 260 PANTHER PTHR11921 14 258 9.4E-169 T 20-04-2016 AMC99_RS06260 16221f0bcb94223c8fc7c8427377759d 260 SUPERFAMILY SSF46548 130 258 1.92E-39 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMC99_RS06260 16221f0bcb94223c8fc7c8427377759d 260 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 133 1.3E-34 T 20-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AMC99_RS06260 16221f0bcb94223c8fc7c8427377759d 260 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 20-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMC99_RS06260 16221f0bcb94223c8fc7c8427377759d 260 Pfam PF13534 4Fe-4S dicluster domain 170 242 5.0E-9 T 20-04-2016 AMC99_RS06260 16221f0bcb94223c8fc7c8427377759d 260 SUPERFAMILY SSF54292 26 128 4.16E-32 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMC99_RS06260 16221f0bcb94223c8fc7c8427377759d 260 Gene3D G3DSA:3.10.20.30 22 128 2.2E-43 T 20-04-2016 IPR012675 Beta-grasp domain AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 Pfam PF04898 Glutamate synthase central domain 480 765 2.7E-112 T 20-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 Pfam PF00310 Glutamine amidotransferases class-II 24 450 2.1E-179 T 20-04-2016 IPR017932 Glutamine amidotransferase type 2 domain AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 Gene3D G3DSA:3.60.20.10 24 461 1.2E-181 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 Pfam PF01493 GXGXG motif 1277 1461 3.0E-81 T 20-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 SUPERFAMILY SSF56235 24 453 6.56E-153 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 Gene3D G3DSA:2.160.20.60 1253 1545 8.7E-104 T 20-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 PANTHER PTHR11938:SF1 13 1462 0.0 T 20-04-2016 AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 PANTHER PTHR11938:SF1 1490 1541 0.0 T 20-04-2016 AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 SUPERFAMILY SSF51395 469 1231 5.29E-264 T 20-04-2016 AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 SUPERFAMILY SSF69336 1490 1538 3.14E-91 T 20-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 SUPERFAMILY SSF69336 1246 1462 3.14E-91 T 20-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 Gene3D G3DSA:3.20.20.70 466 817 6.1E-110 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 PANTHER PTHR11938 13 1462 0.0 T 20-04-2016 AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 PANTHER PTHR11938 1490 1541 0.0 T 20-04-2016 AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 Pfam PF01645 Conserved region in glutamate synthase 830 1197 3.5E-154 T 20-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AMC99_RS11600 fe9652971c78e54bc7165a0674cb7b5c 1552 Gene3D G3DSA:3.20.20.70 875 1231 2.2E-181 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS07790 bff6c9fa9ede45925c08445c327401e1 284 Pfam PF00043 Glutathione S-transferase, C-terminal domain 182 251 8.9E-9 T 20-04-2016 IPR004046 Glutathione S-transferase, C-terminal AMC99_RS07790 bff6c9fa9ede45925c08445c327401e1 284 PANTHER PTHR11260:SF258 18 261 6.0E-102 T 20-04-2016 AMC99_RS07790 bff6c9fa9ede45925c08445c327401e1 284 Pfam PF02798 Glutathione S-transferase, N-terminal domain 65 127 3.1E-6 T 20-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_RS07790 bff6c9fa9ede45925c08445c327401e1 284 Gene3D G3DSA:1.20.1050.10 131 255 6.7E-41 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS07790 bff6c9fa9ede45925c08445c327401e1 284 Gene3D G3DSA:3.40.30.10 35 130 4.1E-24 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS07790 bff6c9fa9ede45925c08445c327401e1 284 PANTHER PTHR11260 18 261 6.0E-102 T 20-04-2016 AMC99_RS07790 bff6c9fa9ede45925c08445c327401e1 284 SUPERFAMILY SSF52833 39 130 1.67E-16 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS07790 bff6c9fa9ede45925c08445c327401e1 284 SUPERFAMILY SSF47616 133 280 1.25E-31 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS07895 2c3e999daf727bdd9e48351470919c29 447 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 10 442 8.2E-139 T 20-04-2016 AMC99_RS07895 2c3e999daf727bdd9e48351470919c29 447 PANTHER PTHR11918:SF43 8 443 2.0E-166 T 20-04-2016 AMC99_RS07895 2c3e999daf727bdd9e48351470919c29 447 Gene3D G3DSA:3.80.30.20 151 382 9.6E-74 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMC99_RS07895 2c3e999daf727bdd9e48351470919c29 447 SUPERFAMILY SSF102114 131 388 4.19E-58 T 20-04-2016 AMC99_RS07895 2c3e999daf727bdd9e48351470919c29 447 Pfam PF04055 Radical SAM superfamily 156 329 1.2E-25 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_RS07895 2c3e999daf727bdd9e48351470919c29 447 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 155 175 - T 20-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMC99_RS07895 2c3e999daf727bdd9e48351470919c29 447 PANTHER PTHR11918 8 443 2.0E-166 T 20-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein AMC99_RS07895 2c3e999daf727bdd9e48351470919c29 447 Pfam PF00919 Uncharacterized protein family UPF0004 11 109 3.4E-27 T 20-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AMC99_RS07895 2c3e999daf727bdd9e48351470919c29 447 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 439 8.2E-143 T 20-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AMC99_RS07895 2c3e999daf727bdd9e48351470919c29 447 Pfam PF01938 TRAM domain 385 441 7.1E-7 T 20-04-2016 IPR002792 TRAM domain AMC99_RS07895 2c3e999daf727bdd9e48351470919c29 447 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 8 442 69.29 T 20-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AMC99_RS07895 2c3e999daf727bdd9e48351470919c29 447 SMART SM00729 151 371 6.6E-58 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 Pfam PF00005 ABC transporter 833 887 1.6E-5 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 SUPERFAMILY SSF52540 642 940 7.1E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:1.10.8.280 308 429 1.9E-37 T 20-04-2016 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:3.30.1490.20 132 155 3.9E-28 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:3.30.1490.20 202 241 3.9E-28 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 952 0.0 T 20-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:1.20.1580.10 93 131 5.5E-48 T 20-04-2016 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:1.20.1580.10 272 305 5.5E-48 T 20-04-2016 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:1.20.1580.10 430 506 5.5E-48 T 20-04-2016 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 ProSitePatterns PS00211 ABC transporters family signature. 857 871 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 ProSitePatterns PS00211 ABC transporters family signature. 516 530 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 PANTHER PTHR32282:SF2 264 975 0.0 T 20-04-2016 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 PANTHER PTHR32282:SF2 2 242 0.0 T 20-04-2016 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 967 22.507 T 20-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:3.40.50.300 507 625 6.8E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:3.40.50.300 640 719 1.9E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:3.40.50.300 3 53 6.8E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:3.40.50.300 848 972 1.9E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 SUPERFAMILY SSF52540 475 598 1.87E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 SUPERFAMILY SSF52540 6 206 1.87E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 PANTHER PTHR32282 264 975 0.0 T 20-04-2016 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 PANTHER PTHR32282 2 242 0.0 T 20-04-2016 AMC99_RS07290 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:1.20.1580.10 721 847 9.2E-53 T 20-04-2016 AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 Pfam PF03461 TRCF domain 1018 1110 9.0E-24 T 20-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 SMART SM00490 834 918 7.5E-19 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1089 0.0 T 20-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 Pfam PF00271 Helicase conserved C-terminal domain 812 917 4.6E-18 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 SUPERFAMILY SSF141259 479 556 1.57E-20 T 20-04-2016 IPR003711 CarD-like/TRCF domain AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 Gene3D G3DSA:3.40.50.300 808 971 3.5E-32 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 Pfam PF02559 CarD-like/TRCF domain 489 581 9.1E-25 T 20-04-2016 IPR003711 CarD-like/TRCF domain AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 SUPERFAMILY SSF52540 532 792 1.93E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 PANTHER PTHR14025 391 1157 0.0 T 20-04-2016 AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 SUPERFAMILY SSF52540 790 997 5.11E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 SUPERFAMILY SSF52540 5 337 9.87E-88 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 SUPERFAMILY SSF52540 354 478 1.3E-18 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 PANTHER PTHR14025:SF21 391 1157 0.0 T 20-04-2016 AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 SUPERFAMILY SSF143517 1005 1156 3.14E-39 T 20-04-2016 AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 SMART SM00487 608 798 2.9E-35 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 Pfam PF00270 DEAD/DEAH box helicase 613 774 7.9E-18 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 SMART SM01058 488 584 2.7E-42 T 20-04-2016 IPR003711 CarD-like/TRCF domain AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 SMART SM00982 1016 1116 2.2E-38 T 20-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 28 1124 27.66 T 20-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 Gene3D G3DSA:3.40.50.300 601 794 4.7E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04685 7e35891781818688f5620bb44fc52d24 1168 Gene3D G3DSA:3.30.2060.10 129 206 8.4E-12 T 20-04-2016 AMC99_RS03835 8209fd8a857c8511d1a8d998b08615df 430 Gene3D G3DSA:2.40.160.60 28 428 1.1E-78 T 20-04-2016 AMC99_RS03835 8209fd8a857c8511d1a8d998b08615df 430 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 34 424 1.8E-28 T 20-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMC99_RS03835 8209fd8a857c8511d1a8d998b08615df 430 SUPERFAMILY SSF56935 30 430 3.89E-51 T 20-04-2016 AMC99_RS03835 8209fd8a857c8511d1a8d998b08615df 430 PANTHER PTHR35093 4 430 4.4E-28 T 20-04-2016 AMC99_RS01400 3376933580002741b6dde0ac17d8cfd0 156 PANTHER PTHR23091:SF36 16 151 2.3E-29 T 20-04-2016 AMC99_RS01400 3376933580002741b6dde0ac17d8cfd0 156 Pfam PF00583 Acetyltransferase (GNAT) family 57 133 2.2E-12 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS01400 3376933580002741b6dde0ac17d8cfd0 156 SUPERFAMILY SSF55729 4 154 9.12E-27 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS01400 3376933580002741b6dde0ac17d8cfd0 156 PANTHER PTHR23091 16 151 2.3E-29 T 20-04-2016 AMC99_RS01400 3376933580002741b6dde0ac17d8cfd0 156 Gene3D G3DSA:3.40.630.30 5 145 1.5E-26 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS04615 c47108f9a5ac201190936dbb03ffb7b5 328 Pfam PF01636 Phosphotransferase enzyme family 22 253 4.0E-22 T 20-04-2016 IPR002575 Aminoglycoside phosphotransferase AMC99_RS04615 c47108f9a5ac201190936dbb03ffb7b5 328 SUPERFAMILY SSF56112 8 310 1.75E-44 T 20-04-2016 IPR011009 Protein kinase-like domain AMC99_RS04615 c47108f9a5ac201190936dbb03ffb7b5 328 Gene3D G3DSA:3.90.1200.10 92 319 1.0E-58 T 20-04-2016 AMC99_RS04615 c47108f9a5ac201190936dbb03ffb7b5 328 PANTHER PTHR33540:SF1 10 319 5.1E-40 T 20-04-2016 AMC99_RS04615 c47108f9a5ac201190936dbb03ffb7b5 328 PANTHER PTHR33540 10 319 5.1E-40 T 20-04-2016 AMC99_RS04615 c47108f9a5ac201190936dbb03ffb7b5 328 Gene3D G3DSA:3.30.200.20 6 90 2.0E-27 T 20-04-2016 AMC99_RS04075 e0bec9a0f7979d64de1eff98dbfb7995 864 PANTHER PTHR32552:SF33 561 609 9.3E-89 T 20-04-2016 AMC99_RS04075 e0bec9a0f7979d64de1eff98dbfb7995 864 PANTHER PTHR32552:SF33 10 490 9.3E-89 T 20-04-2016 AMC99_RS04075 e0bec9a0f7979d64de1eff98dbfb7995 864 PANTHER PTHR32552:SF33 643 864 9.3E-89 T 20-04-2016 AMC99_RS04075 e0bec9a0f7979d64de1eff98dbfb7995 864 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 174 1.4E-16 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS04075 e0bec9a0f7979d64de1eff98dbfb7995 864 SUPERFAMILY SSF56935 565 604 1.18E-110 T 20-04-2016 AMC99_RS04075 e0bec9a0f7979d64de1eff98dbfb7995 864 SUPERFAMILY SSF56935 44 493 1.18E-110 T 20-04-2016 AMC99_RS04075 e0bec9a0f7979d64de1eff98dbfb7995 864 SUPERFAMILY SSF56935 645 864 1.18E-110 T 20-04-2016 AMC99_RS04075 e0bec9a0f7979d64de1eff98dbfb7995 864 Pfam PF00593 TonB dependent receptor 576 863 1.1E-19 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS04075 e0bec9a0f7979d64de1eff98dbfb7995 864 Gene3D G3DSA:2.170.130.10 46 183 8.0E-32 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS04075 e0bec9a0f7979d64de1eff98dbfb7995 864 Gene3D G3DSA:2.40.170.20 646 864 3.1E-82 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS04075 e0bec9a0f7979d64de1eff98dbfb7995 864 Gene3D G3DSA:2.40.170.20 184 488 3.1E-82 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS04075 e0bec9a0f7979d64de1eff98dbfb7995 864 Gene3D G3DSA:2.40.170.20 562 607 3.1E-82 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS04075 e0bec9a0f7979d64de1eff98dbfb7995 864 PANTHER PTHR32552 561 609 9.3E-89 T 20-04-2016 AMC99_RS04075 e0bec9a0f7979d64de1eff98dbfb7995 864 PANTHER PTHR32552 10 490 9.3E-89 T 20-04-2016 AMC99_RS04075 e0bec9a0f7979d64de1eff98dbfb7995 864 PANTHER PTHR32552 643 864 9.3E-89 T 20-04-2016 AMC99_RS05590 8c5e5f45db9661a1084987b516ca2e30 347 Pfam PF01628 HrcA protein C terminal domain 110 332 8.3E-54 T 20-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 AMC99_RS05590 8c5e5f45db9661a1084987b516ca2e30 347 SUPERFAMILY SSF55781 79 346 4.76E-54 T 20-04-2016 IPR029016 GAF domain-like AMC99_RS05590 8c5e5f45db9661a1084987b516ca2e30 347 PANTHER PTHR34824 1 346 1.2E-93 T 20-04-2016 AMC99_RS05590 8c5e5f45db9661a1084987b516ca2e30 347 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 8 339 27.957 T 20-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMC99_RS05590 8c5e5f45db9661a1084987b516ca2e30 347 Gene3D G3DSA:3.30.450.40 182 346 9.9E-34 T 20-04-2016 IPR029016 GAF domain-like AMC99_RS05590 8c5e5f45db9661a1084987b516ca2e30 347 PIRSF PIRSF005485 6 347 3.4E-101 T 20-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMC99_RS05590 8c5e5f45db9661a1084987b516ca2e30 347 Gene3D G3DSA:1.10.10.10 7 89 1.1E-31 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS05590 8c5e5f45db9661a1084987b516ca2e30 347 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 10 345 4.0E-89 T 20-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMC99_RS05590 8c5e5f45db9661a1084987b516ca2e30 347 SUPERFAMILY SSF46785 8 90 7.44E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 10 685 43.341 T 20-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 Pfam PF04546 Sigma-70, non-essential region 169 420 1.7E-38 T 20-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 449 673 1.2E-38 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 476 489 - T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 SUPERFAMILY SSF88946 243 519 3.45E-94 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 SUPERFAMILY SSF88946 144 207 3.45E-94 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 Pfam PF03979 Sigma-70 factor, region 1.1 19 97 1.1E-22 T 20-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 Pfam PF04542 Sigma-70 region 2 452 521 2.0E-21 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 Pfam PF04539 Sigma-70 region 3 531 606 3.7E-28 T 20-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 PRINTS PR00046 Major sigma-70 factor signature 476 489 6.7E-31 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 PRINTS PR00046 Major sigma-70 factor signature 660 671 6.7E-31 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 PRINTS PR00046 Major sigma-70 factor signature 500 508 6.7E-31 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 PRINTS PR00046 Major sigma-70 factor signature 624 636 6.7E-31 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 PRINTS PR00046 Major sigma-70 factor signature 645 660 6.7E-31 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 Pfam PF00140 Sigma-70 factor, region 1.2 127 158 1.5E-12 T 20-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 Gene3D G3DSA:1.10.601.10 27 142 3.6E-8 T 20-04-2016 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 Gene3D G3DSA:1.10.601.10 143 213 1.5E-119 T 20-04-2016 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 Gene3D G3DSA:1.10.601.10 246 521 1.5E-119 T 20-04-2016 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 PANTHER PTHR30603:SF0 8 74 2.6E-217 T 20-04-2016 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 PANTHER PTHR30603:SF0 403 685 2.6E-217 T 20-04-2016 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 PANTHER PTHR30603:SF0 96 181 2.6E-217 T 20-04-2016 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 645 671 - T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 PANTHER PTHR30603 8 74 2.6E-217 T 20-04-2016 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 PANTHER PTHR30603 403 685 2.6E-217 T 20-04-2016 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 PANTHER PTHR30603 96 181 2.6E-217 T 20-04-2016 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 Gene3D G3DSA:1.10.10.10 525 576 4.0E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 448 684 2.4E-119 T 20-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 SUPERFAMILY SSF88659 582 684 1.96E-26 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 SUPERFAMILY SSF88659 525 598 2.57E-20 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 Gene3D G3DSA:1.10.10.10 615 685 4.3E-32 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS05210 da4f9e647e52e8bd5dc68fffb4a6de80 686 Pfam PF04545 Sigma-70, region 4 620 673 1.5E-18 T 20-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 SUPERFAMILY SSF55785 436 548 8.23E-6 T 20-04-2016 IPR000014 PAS domain AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 Pfam PF12860 PAS fold 431 543 9.9E-10 T 20-04-2016 AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 Pfam PF12860 PAS fold 303 414 5.8E-13 T 20-04-2016 AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 SUPERFAMILY SSF55874 617 779 3.01E-33 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 SMART SM00091 177 244 2.0 T 20-04-2016 IPR000014 PAS domain AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 SMART SM00091 425 492 24.0 T 20-04-2016 IPR000014 PAS domain AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 SMART SM00091 297 363 1.5 T 20-04-2016 IPR000014 PAS domain AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 673 779 7.0E-20 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 PANTHER PTHR24423 159 373 1.4E-74 T 20-04-2016 AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 PANTHER PTHR24423 504 779 1.4E-74 T 20-04-2016 AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 Gene3D G3DSA:3.30.450.20 181 283 1.2E-7 T 20-04-2016 AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 Gene3D G3DSA:3.30.450.20 429 538 6.3E-8 T 20-04-2016 AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 Gene3D G3DSA:3.30.450.20 290 413 1.1E-9 T 20-04-2016 AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 Gene3D G3DSA:3.30.565.10 613 779 6.3E-34 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 709 723 1.3E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 742 760 1.3E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 766 779 1.3E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 Pfam PF00512 His Kinase A (phospho-acceptor) domain 560 627 6.3E-16 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 SUPERFAMILY SSF55785 181 282 6.46E-6 T 20-04-2016 IPR000014 PAS domain AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 Gene3D G3DSA:1.10.287.130 552 612 1.9E-16 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 Pfam PF13188 PAS domain 181 228 0.099 T 20-04-2016 IPR000014 PAS domain AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 SUPERFAMILY SSF55785 281 350 1.52E-5 T 20-04-2016 IPR000014 PAS domain AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 SMART SM00388 559 627 3.7E-17 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 SMART SM00387 672 779 9.8E-23 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS04605 636aba4e7de910dc39b0c2e20e4bf308 779 SUPERFAMILY SSF47384 545 627 8.04E-18 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 SUPERFAMILY SSF52922 537 665 6.67E-39 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 Gene3D G3DSA:3.40.50.970 4 314 1.3E-117 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 SUPERFAMILY SSF52518 341 523 1.91E-66 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 PANTHER PTHR11624:SF1 337 665 0.0 T 20-04-2016 AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 PANTHER PTHR11624:SF1 4 311 0.0 T 20-04-2016 AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 PANTHER PTHR11624 337 665 0.0 T 20-04-2016 IPR033247 Transketolase family AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 PANTHER PTHR11624 4 311 0.0 T 20-04-2016 IPR033247 Transketolase family AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 Gene3D G3DSA:3.40.50.920 540 664 1.3E-43 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 ProSitePatterns PS00801 Transketolase signature 1. 16 36 - T 20-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 315 1.3E-131 T 20-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 SUPERFAMILY SSF52518 5 314 6.15E-111 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 Pfam PF02780 Transketolase, C-terminal domain 551 656 1.5E-12 T 20-04-2016 IPR033248 Transketolase, C-terminal domain AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 SMART SM00861 351 522 2.4E-67 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 Pfam PF02779 Transketolase, pyrimidine binding domain 350 521 2.8E-46 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 10 662 1.0E-246 T 20-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AMC99_RS04770 d7ad477b8a75437a9f75da97f86e206a 666 Gene3D G3DSA:3.40.50.970 339 526 5.0E-75 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS06370 934f31fecc8643f24677a66777466ebc 463 PANTHER PTHR12592 1 461 1.1E-72 T 20-04-2016 AMC99_RS06370 934f31fecc8643f24677a66777466ebc 463 PANTHER PTHR12592:SF0 1 461 1.1E-72 T 20-04-2016 AMC99_RS06370 934f31fecc8643f24677a66777466ebc 463 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 219 447 1.0E-42 T 20-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 AMC99_RS06370 934f31fecc8643f24677a66777466ebc 463 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 7 200 5.1E-31 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMC99_RS06370 934f31fecc8643f24677a66777466ebc 463 Gene3D G3DSA:3.40.50.10260 5 220 3.3E-51 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMC99_RS06370 934f31fecc8643f24677a66777466ebc 463 PIRSF PIRSF017184 4 463 1.6E-80 T 20-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AMC99_RS06370 934f31fecc8643f24677a66777466ebc 463 SUPERFAMILY SSF53613 217 454 6.08E-45 T 20-04-2016 IPR029056 Ribokinase-like AMC99_RS06370 934f31fecc8643f24677a66777466ebc 463 SUPERFAMILY SSF64153 6 228 1.14E-47 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMC99_RS06370 934f31fecc8643f24677a66777466ebc 463 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 8 201 18.555 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMC99_RS06370 934f31fecc8643f24677a66777466ebc 463 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 289 299 - T 20-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site AMC99_RS06370 934f31fecc8643f24677a66777466ebc 463 Gene3D G3DSA:3.40.1190.20 221 460 4.8E-58 T 20-04-2016 IPR029056 Ribokinase-like AMC99_RS06370 934f31fecc8643f24677a66777466ebc 463 Pfam PF03853 YjeF-related protein N-terminus 27 178 1.1E-29 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMC99_RS06370 934f31fecc8643f24677a66777466ebc 463 Pfam PF01256 Carbohydrate kinase 232 455 3.9E-38 T 20-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 AMC99_RS06370 934f31fecc8643f24677a66777466ebc 463 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 207 460 15.267 T 20-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 AMC99_RS02615 9a08c64a587c758ca29a2ee0b9cfc619 222 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 8 217 47.546 T 20-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 AMC99_RS02615 9a08c64a587c758ca29a2ee0b9cfc619 222 PANTHER PTHR21403 1 218 3.0E-75 T 20-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 AMC99_RS02615 9a08c64a587c758ca29a2ee0b9cfc619 222 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 153 174 - T 20-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 AMC99_RS02615 9a08c64a587c758ca29a2ee0b9cfc619 222 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 9 194 1.9E-58 T 20-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 AMC99_RS02615 9a08c64a587c758ca29a2ee0b9cfc619 222 SUPERFAMILY SSF53850 9 204 1.59E-59 T 20-04-2016 AMC99_RS02615 9a08c64a587c758ca29a2ee0b9cfc619 222 PANTHER PTHR21403:SF3 1 218 3.0E-75 T 20-04-2016 AMC99_RS02615 9a08c64a587c758ca29a2ee0b9cfc619 222 Gene3D G3DSA:3.40.190.10 8 152 3.0E-39 T 20-04-2016 AMC99_RS02615 9a08c64a587c758ca29a2ee0b9cfc619 222 Pfam PF01634 ATP phosphoribosyltransferase 60 212 3.2E-46 T 20-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 ProSitePatterns PS00080 Multicopper oxidases signature 2. 560 571 - T 20-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 PANTHER PTHR11709 49 208 1.5E-100 T 20-04-2016 AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 PANTHER PTHR11709 238 349 1.5E-100 T 20-04-2016 AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 PANTHER PTHR11709 443 577 1.5E-100 T 20-04-2016 AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 SUPERFAMILY SSF49503 424 577 1.4E-37 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 SUPERFAMILY SSF49503 168 363 4.56E-50 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 PANTHER PTHR11709:SF33 49 208 1.5E-100 T 20-04-2016 AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 PANTHER PTHR11709:SF33 238 349 1.5E-100 T 20-04-2016 AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 PANTHER PTHR11709:SF33 443 577 1.5E-100 T 20-04-2016 AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 SUPERFAMILY SSF49503 56 191 7.14E-37 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 Pfam PF07731 Multicopper oxidase 463 579 5.5E-27 T 20-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 Pfam PF07732 Multicopper oxidase 62 163 1.3E-38 T 20-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 Gene3D G3DSA:2.60.40.420 449 580 1.8E-39 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 Gene3D G3DSA:2.60.40.420 60 178 1.4E-30 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 3 578 1.1E-220 T 20-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 ProSitePatterns PS00079 Multicopper oxidases signature 1. 555 575 - T 20-04-2016 IPR033138 Multicopper oxidases, conserved site AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 Pfam PF00394 Multicopper oxidase 224 328 7.9E-25 T 20-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 AMC99_RS10585 01c9183c78c546db4659f2b4ff4f82d9 585 Gene3D G3DSA:2.60.40.420 179 363 6.5E-46 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 SUPERFAMILY SSF51905 1 314 8.43E-45 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 PANTHER PTHR22912:SF180 1 386 4.5E-97 T 20-04-2016 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 SUPERFAMILY SSF55424 317 409 2.88E-28 T 20-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 Gene3D G3DSA:3.30.390.30 324 409 2.4E-29 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 Pfam PF14759 Reductase C-terminal 324 409 4.9E-29 T 20-04-2016 IPR028202 Reductase, C-terminal AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 Gene3D G3DSA:3.50.50.60 1 110 4.5E-25 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.2E-22 T 20-04-2016 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.2E-22 T 20-04-2016 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 173 1.2E-22 T 20-04-2016 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 1.2E-22 T 20-04-2016 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 304 2.0E-59 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.0E-22 T 20-04-2016 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.0E-22 T 20-04-2016 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.0E-22 T 20-04-2016 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 2.0E-22 T 20-04-2016 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 2.0E-22 T 20-04-2016 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 Gene3D G3DSA:3.50.50.60 111 314 6.5E-45 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11795 9c74292818f7097179795ebb82e073bf 409 PANTHER PTHR22912 1 386 4.5E-97 T 20-04-2016 AMC99_RS12240 144874fcddb4273fd81b094461267ff0 119 SUPERFAMILY SSF54913 18 113 3.15E-26 T 20-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMC99_RS12240 144874fcddb4273fd81b094461267ff0 119 Gene3D G3DSA:3.30.70.830 18 113 4.4E-27 T 20-04-2016 AMC99_RS12240 144874fcddb4273fd81b094461267ff0 119 Pfam PF03091 CutA1 divalent ion tolerance protein 18 112 1.6E-23 T 20-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AMC99_RS12240 144874fcddb4273fd81b094461267ff0 119 PANTHER PTHR23419 18 112 1.7E-21 T 20-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 Pfam PF02142 MGS-like domain 992 1077 2.0E-16 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 425 574 2.6E-41 T 20-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 SUPERFAMILY SSF52440 1 127 2.88E-49 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 Gene3D G3DSA:3.30.470.20 200 398 1.3E-77 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 Gene3D G3DSA:3.30.470.20 782 970 2.7E-77 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 Gene3D G3DSA:3.40.50.1380 972 1106 8.9E-38 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 SUPERFAMILY SSF52440 590 712 3.02E-46 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 SUPERFAMILY SSF56059 710 969 1.43E-101 T 20-04-2016 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 334 1.8E-69 T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 710 911 3.1E-34 T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.4E-65 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.4E-65 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.4E-65 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.4E-65 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.4E-65 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 2.4E-65 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.4E-65 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 Gene3D G3DSA:3.30.1490.20 142 199 9.4E-23 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 Gene3D G3DSA:3.30.1490.20 723 781 4.4E-25 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 PANTHER PTHR11405:SF47 3 506 0.0 T 20-04-2016 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 PANTHER PTHR11405:SF47 537 1106 0.0 T 20-04-2016 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1105 13.375 T 20-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 Gene3D G3DSA:3.40.50.20 3 108 9.8E-45 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 PANTHER PTHR11405 3 506 0.0 T 20-04-2016 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 PANTHER PTHR11405 537 1106 0.0 T 20-04-2016 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 Gene3D G3DSA:3.40.50.20 564 699 2.7E-56 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 SUPERFAMILY SSF48108 395 503 7.59E-44 T 20-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 SUPERFAMILY SSF48108 534 577 7.59E-44 T 20-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 SMART SM00851 991 1077 4.3E-29 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 SUPERFAMILY SSF52335 971 1106 8.77E-38 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1097 13.031 T 20-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 Gene3D G3DSA:1.10.1030.10 399 563 8.6E-47 T 20-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1085 0.0 T 20-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 SUPERFAMILY SSF56059 128 400 2.12E-104 T 20-04-2016 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 875 882 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 SMART SM01096 422 574 9.3E-62 T 20-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05240 c926326abc25788cd7f4710efefc7ffe 1107 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 746 760 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_RS12685 2c517db69b5c6c4a2348b7210365ab50 284 PANTHER PTHR10491:SF4 2 282 1.3E-88 T 20-04-2016 AMC99_RS12685 2c517db69b5c6c4a2348b7210365ab50 284 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 281 1.4E-95 T 20-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family AMC99_RS12685 2c517db69b5c6c4a2348b7210365ab50 284 Pfam PF04321 RmlD substrate binding domain 2 282 7.9E-105 T 20-04-2016 IPR029903 RmlD-like substrate binding domain AMC99_RS12685 2c517db69b5c6c4a2348b7210365ab50 284 Gene3D G3DSA:3.90.25.10 214 266 6.8E-31 T 20-04-2016 AMC99_RS12685 2c517db69b5c6c4a2348b7210365ab50 284 Gene3D G3DSA:3.90.25.10 168 180 6.8E-31 T 20-04-2016 AMC99_RS12685 2c517db69b5c6c4a2348b7210365ab50 284 PANTHER PTHR10491 2 282 1.3E-88 T 20-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family AMC99_RS12685 2c517db69b5c6c4a2348b7210365ab50 284 SUPERFAMILY SSF51735 2 281 7.24E-94 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12685 2c517db69b5c6c4a2348b7210365ab50 284 Gene3D G3DSA:3.40.50.720 32 167 2.3E-25 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06880 a80a70dedca7e4c38ba36aa2d4177104 341 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 320 8.4E-56 T 20-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS06880 a80a70dedca7e4c38ba36aa2d4177104 341 Gene3D G3DSA:3.30.360.10 145 316 2.9E-80 T 20-04-2016 AMC99_RS06880 a80a70dedca7e4c38ba36aa2d4177104 341 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 231 245 - T 20-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMC99_RS06880 a80a70dedca7e4c38ba36aa2d4177104 341 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 119 1.6E-33 T 20-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMC99_RS06880 a80a70dedca7e4c38ba36aa2d4177104 341 PANTHER PTHR10174 68 333 2.7E-77 T 20-04-2016 AMC99_RS06880 a80a70dedca7e4c38ba36aa2d4177104 341 SMART SM00859 4 121 6.3E-44 T 20-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMC99_RS06880 a80a70dedca7e4c38ba36aa2d4177104 341 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 4 333 2.7E-138 T 20-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMC99_RS06880 a80a70dedca7e4c38ba36aa2d4177104 341 Gene3D G3DSA:3.40.50.720 3 144 6.3E-61 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06880 a80a70dedca7e4c38ba36aa2d4177104 341 SUPERFAMILY SSF55347 131 321 3.87E-75 T 20-04-2016 AMC99_RS06880 a80a70dedca7e4c38ba36aa2d4177104 341 SUPERFAMILY SSF51735 3 159 4.95E-52 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06880 a80a70dedca7e4c38ba36aa2d4177104 341 PIRSF PIRSF000148 2 338 1.5E-129 T 20-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMC99_RS06880 a80a70dedca7e4c38ba36aa2d4177104 341 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 334 36.258 T 20-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMC99_RS07110 91c7c20d006b53e7fd08705b6df337bf 315 Pfam PF05013 N-formylglutamate amidohydrolase 38 272 1.1E-59 T 20-04-2016 IPR007709 N-formylglutamate amidohydrolase AMC99_RS07110 91c7c20d006b53e7fd08705b6df337bf 315 Gene3D G3DSA:3.40.630.40 26 301 2.4E-77 T 20-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMC99_RS07110 91c7c20d006b53e7fd08705b6df337bf 315 SUPERFAMILY SSF53187 27 301 3.77E-67 T 20-04-2016 AMC99_RS10895 9ccfb688abfe282f07a35a34b0ac375a 415 Pfam PF01029 NusB family 8 102 2.0E-7 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMC99_RS10895 9ccfb688abfe282f07a35a34b0ac375a 415 Gene3D G3DSA:3.40.50.150 212 414 3.4E-43 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10895 9ccfb688abfe282f07a35a34b0ac375a 415 SUPERFAMILY SSF53335 180 414 2.26E-52 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10895 9ccfb688abfe282f07a35a34b0ac375a 415 SUPERFAMILY SSF48013 8 130 7.36E-15 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMC99_RS10895 9ccfb688abfe282f07a35a34b0ac375a 415 Pfam PF01189 16S rRNA methyltransferase RsmB/F 225 411 2.9E-36 T 20-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS10895 9ccfb688abfe282f07a35a34b0ac375a 415 PANTHER PTHR22807 190 415 9.5E-58 T 20-04-2016 AMC99_RS10895 9ccfb688abfe282f07a35a34b0ac375a 415 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 201 215 1.8E-24 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS10895 9ccfb688abfe282f07a35a34b0ac375a 415 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 303 1.8E-24 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS10895 9ccfb688abfe282f07a35a34b0ac375a 415 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 397 414 1.8E-24 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS10895 9ccfb688abfe282f07a35a34b0ac375a 415 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 341 357 1.8E-24 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS10895 9ccfb688abfe282f07a35a34b0ac375a 415 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 230 240 1.8E-24 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS10895 9ccfb688abfe282f07a35a34b0ac375a 415 Gene3D G3DSA:1.10.940.10 6 107 1.2E-14 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMC99_RS10895 9ccfb688abfe282f07a35a34b0ac375a 415 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 290 301 - T 20-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 SUPERFAMILY SSF53633 11 262 9.29E-57 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 ProSitePatterns PS00902 Glutamate 5-kinase signature. 213 230 - T 20-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 PIRSF PIRSF000729 7 371 4.2E-112 T 20-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 Gene3D G3DSA:2.30.130.10 278 369 2.4E-24 T 20-04-2016 IPR015947 PUA-like domain AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 Gene3D G3DSA:3.40.1160.10 11 261 3.6E-48 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 PRINTS PR00474 Glutamate 5-kinase family signature 47 61 2.3E-48 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 PRINTS PR00474 Glutamate 5-kinase family signature 215 235 2.3E-48 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 PRINTS PR00474 Glutamate 5-kinase family signature 154 181 2.3E-48 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 PRINTS PR00474 Glutamate 5-kinase family signature 122 143 2.3E-48 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 PRINTS PR00474 Glutamate 5-kinase family signature 82 110 2.3E-48 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 Hamap MF_00456 Glutamate 5-kinase [proB]. 11 263 33.582 T 20-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 SUPERFAMILY SSF88697 280 370 7.18E-23 T 20-04-2016 IPR015947 PUA-like domain AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 SMART SM00359 281 363 9.2E-15 T 20-04-2016 IPR002478 PUA domain GO:0003723 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 Pfam PF00696 Amino acid kinase family 12 241 3.3E-42 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 PANTHER PTHR11063:SF6 11 371 2.0E-93 T 20-04-2016 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 TIGRFAM TIGR01027 proB: glutamate 5-kinase 11 369 2.5E-110 T 20-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 PANTHER PTHR11063 11 371 2.0E-93 T 20-04-2016 AMC99_RS09035 db067f29a62bed3432aa3953b3d7871c 371 Pfam PF01472 PUA domain 281 349 1.7E-17 T 20-04-2016 IPR002478 PUA domain GO:0003723 AMC99_RS02600 73a8d21ffb175d5f9d1e31d9b124c0c4 289 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 15 289 2.0E-62 T 20-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 AMC99_RS02600 73a8d21ffb175d5f9d1e31d9b124c0c4 289 PANTHER PTHR30270:SF0 24 289 6.6E-58 T 20-04-2016 AMC99_RS02600 73a8d21ffb175d5f9d1e31d9b124c0c4 289 PANTHER PTHR30270 24 289 6.6E-58 T 20-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 AMC99_RS02600 73a8d21ffb175d5f9d1e31d9b124c0c4 289 Pfam PF02769 AIR synthase related protein, C-terminal domain 142 249 1.6E-7 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMC99_RS02600 73a8d21ffb175d5f9d1e31d9b124c0c4 289 PIRSF PIRSF005303 1 289 1.4E-60 T 20-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 AMC99_RS02600 73a8d21ffb175d5f9d1e31d9b124c0c4 289 Gene3D G3DSA:3.30.1330.10 3 131 5.2E-30 T 20-04-2016 IPR016188 PurM-like, N-terminal domain AMC99_RS02600 73a8d21ffb175d5f9d1e31d9b124c0c4 289 Gene3D G3DSA:3.90.650.10 138 289 7.5E-30 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMC99_RS02600 73a8d21ffb175d5f9d1e31d9b124c0c4 289 Pfam PF00586 AIR synthase related protein, N-terminal domain 24 129 1.3E-18 T 20-04-2016 IPR016188 PurM-like, N-terminal domain AMC99_RS02600 73a8d21ffb175d5f9d1e31d9b124c0c4 289 SUPERFAMILY SSF56042 137 270 2.24E-23 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMC99_RS02600 73a8d21ffb175d5f9d1e31d9b124c0c4 289 SUPERFAMILY SSF55326 18 129 4.88E-29 T 20-04-2016 AMC99_RS03040 45790bc7db32d3073da1251d407a52d3 544 Pfam PF01921 tRNA synthetases class I (K) 14 374 3.6E-129 T 20-04-2016 AMC99_RS03040 45790bc7db32d3073da1251d407a52d3 544 Gene3D G3DSA:1.10.10.350 445 541 1.7E-30 T 20-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMC99_RS03040 45790bc7db32d3073da1251d407a52d3 544 Gene3D G3DSA:3.40.50.620 284 325 4.7E-4 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS03040 45790bc7db32d3073da1251d407a52d3 544 SUPERFAMILY SSF48163 341 541 1.83E-34 T 20-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMC99_RS03040 45790bc7db32d3073da1251d407a52d3 544 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 56 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS03040 45790bc7db32d3073da1251d407a52d3 544 Gene3D G3DSA:3.40.50.620 15 203 9.4E-39 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS03040 45790bc7db32d3073da1251d407a52d3 544 Gene3D G3DSA:3.40.50.620 240 283 9.4E-39 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS03040 45790bc7db32d3073da1251d407a52d3 544 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 14 541 27.835 T 20-04-2016 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMC99_RS03040 45790bc7db32d3073da1251d407a52d3 544 PANTHER PTHR37940 5 544 1.2E-124 T 20-04-2016 AMC99_RS03040 45790bc7db32d3073da1251d407a52d3 544 SUPERFAMILY SSF52374 15 332 5.63E-50 T 20-04-2016 AMC99_RS03040 45790bc7db32d3073da1251d407a52d3 544 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 43 538 4.9E-49 T 20-04-2016 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 Gene3D G3DSA:3.10.20.30 18 73 8.7E-9 T 20-04-2016 IPR012675 Beta-grasp domain AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 SMART SM00926 238 292 4.7E-16 T 20-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 SUPERFAMILY SSF50692 777 918 1.15E-39 T 20-04-2016 IPR009010 Aspartate decarboxylase-like domain AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 SUPERFAMILY SSF54292 20 92 3.85E-20 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 Gene3D G3DSA:2.20.25.90 249 292 5.2E-19 T 20-04-2016 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 243 918 8.8E-278 T 20-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 Pfam PF01568 Molydopterin dinucleotide binding domain 810 914 1.0E-25 T 20-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 Pfam PF00384 Molybdopterin oxidoreductase 295 725 8.0E-74 T 20-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 PIRSF PIRSF036643 15 950 0.0 T 20-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 211 222 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 Pfam PF00037 4Fe-4S binding domain 209 226 4.5E-6 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 PANTHER PTHR11615 21 69 1.5E-242 T 20-04-2016 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 PANTHER PTHR11615 236 938 1.5E-242 T 20-04-2016 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 SUPERFAMILY SSF54862 93 231 3.47E-37 T 20-04-2016 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 Gene3D G3DSA:3.40.50.740 295 372 9.4E-84 T 20-04-2016 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 Gene3D G3DSA:3.40.50.740 565 767 9.4E-84 T 20-04-2016 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 Gene3D G3DSA:3.30.70.20 153 216 1.0E-13 T 20-04-2016 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 SUPERFAMILY SSF53706 238 765 4.71E-191 T 20-04-2016 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 Gene3D G3DSA:3.30.70.20 217 248 7.4E-6 T 20-04-2016 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 18 94 3.1E-24 T 20-04-2016 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 PANTHER PTHR11615:SF112 21 69 1.5E-242 T 20-04-2016 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 PANTHER PTHR11615:SF112 236 938 1.5E-242 T 20-04-2016 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 Gene3D G3DSA:3.40.228.10 373 564 1.7E-58 T 20-04-2016 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 SMART SM00929 101 141 1.7E-19 T 20-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 101 140 5.8E-17 T 20-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 239 292 1.5E-15 T 20-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMC99_RS00790 a11b197237851ba0928013b8288d99b5 950 Gene3D G3DSA:2.40.40.20 768 919 1.2E-37 T 20-04-2016 AMC99_RS08375 b11c8803e459dc8f8885ef1ec1389f1b 339 Gene3D G3DSA:3.20.20.100 9 323 4.2E-102 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMC99_RS08375 b11c8803e459dc8f8885ef1ec1389f1b 339 Pfam PF00248 Aldo/keto reductase family 16 315 9.0E-69 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMC99_RS08375 b11c8803e459dc8f8885ef1ec1389f1b 339 PANTHER PTHR11732:SF255 1 328 4.3E-132 T 20-04-2016 AMC99_RS08375 b11c8803e459dc8f8885ef1ec1389f1b 339 PANTHER PTHR11732 1 328 4.3E-132 T 20-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMC99_RS08375 b11c8803e459dc8f8885ef1ec1389f1b 339 PRINTS PR00069 Aldo-keto reductase signature 48 72 3.4E-5 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_RS08375 b11c8803e459dc8f8885ef1ec1389f1b 339 PRINTS PR00069 Aldo-keto reductase signature 114 132 3.4E-5 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_RS08375 b11c8803e459dc8f8885ef1ec1389f1b 339 PRINTS PR00069 Aldo-keto reductase signature 145 162 3.4E-5 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_RS08375 b11c8803e459dc8f8885ef1ec1389f1b 339 SUPERFAMILY SSF51430 1 320 6.29E-100 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMC99_RS01125 58eff19fce97c23e7a64412413e61318 216 SMART SM00478 38 185 6.2E-53 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMC99_RS01125 58eff19fce97c23e7a64412413e61318 216 SUPERFAMILY SSF48150 1 208 1.29E-67 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMC99_RS01125 58eff19fce97c23e7a64412413e61318 216 PIRSF PIRSF001435 1 212 5.9E-47 T 20-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMC99_RS01125 58eff19fce97c23e7a64412413e61318 216 PANTHER PTHR10359:SF18 4 211 7.9E-81 T 20-04-2016 AMC99_RS01125 58eff19fce97c23e7a64412413e61318 216 Pfam PF00633 Helix-hairpin-helix motif 99 127 4.9E-10 T 20-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 AMC99_RS01125 58eff19fce97c23e7a64412413e61318 216 Gene3D G3DSA:1.10.1670.10 123 208 5.5E-33 T 20-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMC99_RS01125 58eff19fce97c23e7a64412413e61318 216 Gene3D G3DSA:1.10.340.30 23 122 1.9E-33 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMC99_RS01125 58eff19fce97c23e7a64412413e61318 216 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.1E-77 T 20-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMC99_RS01125 58eff19fce97c23e7a64412413e61318 216 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 2.0E-4 T 20-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 AMC99_RS01125 58eff19fce97c23e7a64412413e61318 216 SMART SM00525 186 206 0.0032 T 20-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 AMC99_RS01125 58eff19fce97c23e7a64412413e61318 216 PANTHER PTHR10359 4 211 7.9E-81 T 20-04-2016 AMC99_RS01125 58eff19fce97c23e7a64412413e61318 216 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.042 T 20-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMC99_RS01125 58eff19fce97c23e7a64412413e61318 216 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.4E-19 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMC99_RS11540 d91390ddeeb81baf719ba174a9bb804c 264 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 16.911 T 20-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMC99_RS11540 d91390ddeeb81baf719ba174a9bb804c 264 PANTHER PTHR30622:SF4 1 263 1.6E-91 T 20-04-2016 AMC99_RS11540 d91390ddeeb81baf719ba174a9bb804c 264 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 8 257 2.9E-66 T 20-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMC99_RS11540 d91390ddeeb81baf719ba174a9bb804c 264 Pfam PF02673 Bacitracin resistance protein BacA 7 259 3.3E-68 T 20-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMC99_RS11540 d91390ddeeb81baf719ba174a9bb804c 264 PANTHER PTHR30622 1 263 1.6E-91 T 20-04-2016 AMC99_RS05740 9f603bf8b23c00fbae80c2e0b1163349 318 PANTHER PTHR11669 7 72 5.3E-47 T 20-04-2016 AMC99_RS05740 9f603bf8b23c00fbae80c2e0b1163349 318 PANTHER PTHR11669 91 210 5.3E-47 T 20-04-2016 AMC99_RS05740 9f603bf8b23c00fbae80c2e0b1163349 318 Gene3D G3DSA:3.40.50.300 7 156 2.8E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05740 9f603bf8b23c00fbae80c2e0b1163349 318 SUPERFAMILY SSF52540 7 208 1.78E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05740 9f603bf8b23c00fbae80c2e0b1163349 318 Gene3D G3DSA:1.10.8.60 157 209 6.5E-5 T 20-04-2016 AMC99_RS05740 9f603bf8b23c00fbae80c2e0b1163349 318 Pfam PF13177 DNA polymerase III, delta subunit 11 168 3.8E-37 T 20-04-2016 AMC99_RS05740 9f603bf8b23c00fbae80c2e0b1163349 318 PANTHER PTHR11669:SF8 7 72 5.3E-47 T 20-04-2016 AMC99_RS05740 9f603bf8b23c00fbae80c2e0b1163349 318 PANTHER PTHR11669:SF8 91 210 5.3E-47 T 20-04-2016 AMC99_RS10910 88b219c0a138b7f093e536aa4e74759a 340 Gene3D G3DSA:3.40.50.1400 218 336 2.8E-25 T 20-04-2016 AMC99_RS10910 88b219c0a138b7f093e536aa4e74759a 340 Hamap MF_00323 Ferrochelatase [hemH]. 18 336 35.106 T 20-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 AMC99_RS10910 88b219c0a138b7f093e536aa4e74759a 340 PANTHER PTHR11108 1 336 2.9E-96 T 20-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 AMC99_RS10910 88b219c0a138b7f093e536aa4e74759a 340 SUPERFAMILY SSF53800 17 339 5.89E-95 T 20-04-2016 AMC99_RS10910 88b219c0a138b7f093e536aa4e74759a 340 Gene3D G3DSA:3.40.50.1400 18 217 3.1E-64 T 20-04-2016 AMC99_RS10910 88b219c0a138b7f093e536aa4e74759a 340 ProSitePatterns PS00534 Ferrochelatase signature. 205 223 - T 20-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 AMC99_RS10910 88b219c0a138b7f093e536aa4e74759a 340 TIGRFAM TIGR00109 hemH: ferrochelatase 16 331 2.2E-80 T 20-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 AMC99_RS10910 88b219c0a138b7f093e536aa4e74759a 340 Pfam PF00762 Ferrochelatase 19 335 1.5E-101 T 20-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 AMC99_RS09060 daf5dccf92fd0d29103fce58b0997149 264 SUPERFAMILY SSF48179 150 258 9.86E-26 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMC99_RS09060 daf5dccf92fd0d29103fce58b0997149 264 Gene3D G3DSA:1.10.3730.10 150 256 2.0E-26 T 20-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMC99_RS09060 daf5dccf92fd0d29103fce58b0997149 264 Gene3D G3DSA:3.40.50.720 2 147 4.0E-25 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09060 daf5dccf92fd0d29103fce58b0997149 264 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 85 6.6E-6 T 20-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMC99_RS09060 daf5dccf92fd0d29103fce58b0997149 264 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 256 20.693 T 20-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMC99_RS09060 daf5dccf92fd0d29103fce58b0997149 264 PANTHER PTHR11645:SF0 3 263 8.8E-55 T 20-04-2016 AMC99_RS09060 daf5dccf92fd0d29103fce58b0997149 264 PIRSF PIRSF000193 1 259 1.6E-47 T 20-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMC99_RS09060 daf5dccf92fd0d29103fce58b0997149 264 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 211 233 - T 20-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMC99_RS09060 daf5dccf92fd0d29103fce58b0997149 264 PANTHER PTHR11645 3 263 8.8E-55 T 20-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMC99_RS09060 daf5dccf92fd0d29103fce58b0997149 264 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 151 256 1.5E-26 T 20-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMC99_RS09060 daf5dccf92fd0d29103fce58b0997149 264 SUPERFAMILY SSF51735 2 148 3.66E-18 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS04885 602550764a8dbb14dba4cc5a9194e288 541 SUPERFAMILY SSF48452 434 495 2.35E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS04885 602550764a8dbb14dba4cc5a9194e288 541 SUPERFAMILY SSF48452 106 190 2.35E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS04885 602550764a8dbb14dba4cc5a9194e288 541 Gene3D G3DSA:1.25.40.10 378 495 4.1E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS04885 602550764a8dbb14dba4cc5a9194e288 541 SUPERFAMILY SSF48452 224 428 9.48E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS04885 602550764a8dbb14dba4cc5a9194e288 541 Gene3D G3DSA:1.25.40.10 225 349 2.7E-4 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS04885 602550764a8dbb14dba4cc5a9194e288 541 Gene3D G3DSA:1.25.40.10 84 194 3.1E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS04885 602550764a8dbb14dba4cc5a9194e288 541 SUPERFAMILY SSF48452 327 356 2.35E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 27 882 22.771 T 20-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 PIRSF PIRSF006076 15 882 6.6E-242 T 20-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 Pfam PF01103 Surface antigen 478 882 9.3E-67 T 20-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 PANTHER PTHR12815 57 712 4.9E-168 T 20-04-2016 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 PANTHER PTHR12815 734 781 4.9E-168 T 20-04-2016 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 PANTHER PTHR12815 825 882 4.9E-168 T 20-04-2016 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 Pfam PF07244 Surface antigen variable number repeat 295 373 9.7E-9 T 20-04-2016 IPR010827 Surface antigen variable number GO:0019867 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 Pfam PF07244 Surface antigen variable number repeat 124 201 2.5E-14 T 20-04-2016 IPR010827 Surface antigen variable number GO:0019867 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 Pfam PF07244 Surface antigen variable number repeat 377 450 7.9E-9 T 20-04-2016 IPR010827 Surface antigen variable number GO:0019867 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 Pfam PF07244 Surface antigen variable number repeat 205 292 2.0E-13 T 20-04-2016 IPR010827 Surface antigen variable number GO:0019867 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 57 882 7.3E-212 T 20-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 PANTHER PTHR12815:SF11 57 712 4.9E-168 T 20-04-2016 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 PANTHER PTHR12815:SF11 734 781 4.9E-168 T 20-04-2016 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 PANTHER PTHR12815:SF11 825 882 4.9E-168 T 20-04-2016 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 Gene3D G3DSA:2.40.160.50 418 779 1.1E-11 T 20-04-2016 AMC99_RS03375 9c8b2e015723943e8e8c55f9ce76002e 882 Gene3D G3DSA:2.40.160.50 839 882 1.2E-4 T 20-04-2016 AMC99_RS13005 169e569dbc464659260d10a0aebfdea4 286 SUPERFAMILY SSF46626 44 246 5.17E-58 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS13005 169e569dbc464659260d10a0aebfdea4 286 PRINTS PR00603 Cytochrome C1 signature 150 174 5.8E-51 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMC99_RS13005 169e569dbc464659260d10a0aebfdea4 286 PRINTS PR00603 Cytochrome C1 signature 52 71 5.8E-51 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMC99_RS13005 169e569dbc464659260d10a0aebfdea4 286 PRINTS PR00603 Cytochrome C1 signature 247 262 5.8E-51 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMC99_RS13005 169e569dbc464659260d10a0aebfdea4 286 PRINTS PR00603 Cytochrome C1 signature 228 247 5.8E-51 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMC99_RS13005 169e569dbc464659260d10a0aebfdea4 286 PRINTS PR00603 Cytochrome C1 signature 72 91 5.8E-51 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMC99_RS13005 169e569dbc464659260d10a0aebfdea4 286 PRINTS PR00603 Cytochrome C1 signature 117 137 5.8E-51 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMC99_RS13005 169e569dbc464659260d10a0aebfdea4 286 PRINTS PR00603 Cytochrome C1 signature 195 206 5.8E-51 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMC99_RS13005 169e569dbc464659260d10a0aebfdea4 286 PANTHER PTHR10266 47 283 2.1E-80 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMC99_RS13005 169e569dbc464659260d10a0aebfdea4 286 Gene3D G3DSA:1.10.760.10 45 247 1.0E-72 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS13005 169e569dbc464659260d10a0aebfdea4 286 Gene3D G3DSA:1.20.5.100 248 284 4.1E-12 T 20-04-2016 AMC99_RS13005 169e569dbc464659260d10a0aebfdea4 286 Pfam PF02167 Cytochrome C1 family 54 280 1.8E-89 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMC99_RS13005 169e569dbc464659260d10a0aebfdea4 286 PANTHER PTHR10266:SF3 47 283 2.1E-80 T 20-04-2016 AMC99_RS12870 30825054df2a7f2b6cccf3fd5e35c0a6 250 PANTHER PTHR21294 1 248 4.5E-151 T 20-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 AMC99_RS12870 30825054df2a7f2b6cccf3fd5e35c0a6 250 Pfam PF01012 Electron transfer flavoprotein domain 29 206 2.0E-48 T 20-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AMC99_RS12870 30825054df2a7f2b6cccf3fd5e35c0a6 250 Gene3D G3DSA:3.40.50.620 1 246 1.0E-103 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS12870 30825054df2a7f2b6cccf3fd5e35c0a6 250 PANTHER PTHR21294:SF8 1 248 4.5E-151 T 20-04-2016 AMC99_RS12870 30825054df2a7f2b6cccf3fd5e35c0a6 250 SMART SM00893 23 213 1.3E-65 T 20-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AMC99_RS12870 30825054df2a7f2b6cccf3fd5e35c0a6 250 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 157 177 - T 20-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 AMC99_RS12870 30825054df2a7f2b6cccf3fd5e35c0a6 250 PIRSF PIRSF000090 1 250 6.2E-86 T 20-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 AMC99_RS12870 30825054df2a7f2b6cccf3fd5e35c0a6 250 SUPERFAMILY SSF52402 1 243 2.37E-86 T 20-04-2016 AMC99_RS05465 473ff557a93109e1bb17b9794c4942e8 409 PANTHER PTHR11766 4 404 6.5E-169 T 20-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 AMC99_RS05465 473ff557a93109e1bb17b9794c4942e8 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 222 234 2.5E-28 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMC99_RS05465 473ff557a93109e1bb17b9794c4942e8 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 189 211 2.5E-28 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMC99_RS05465 473ff557a93109e1bb17b9794c4942e8 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 168 183 2.5E-28 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMC99_RS05465 473ff557a93109e1bb17b9794c4942e8 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 48 70 2.5E-28 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMC99_RS05465 473ff557a93109e1bb17b9794c4942e8 409 Pfam PF00579 tRNA synthetases class I (W and Y) 39 327 3.0E-72 T 20-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS05465 473ff557a93109e1bb17b9794c4942e8 409 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 6 409 39.924 T 20-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AMC99_RS05465 473ff557a93109e1bb17b9794c4942e8 409 Gene3D G3DSA:3.10.290.10 321 407 2.7E-15 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS05465 473ff557a93109e1bb17b9794c4942e8 409 Gene3D G3DSA:1.10.240.10 239 320 2.4E-36 T 20-04-2016 AMC99_RS05465 473ff557a93109e1bb17b9794c4942e8 409 SUPERFAMILY SSF52374 7 327 1.61E-96 T 20-04-2016 AMC99_RS05465 473ff557a93109e1bb17b9794c4942e8 409 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 6 403 2.1E-109 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMC99_RS05465 473ff557a93109e1bb17b9794c4942e8 409 SUPERFAMILY SSF55174 318 408 1.96E-14 T 20-04-2016 AMC99_RS05465 473ff557a93109e1bb17b9794c4942e8 409 Gene3D G3DSA:3.40.50.620 4 238 4.1E-95 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 TIGRFAM TIGR01243 CDC48: AAA family ATPase, CDC48 subfamily 17 734 6.5E-273 T 20-04-2016 IPR005938 AAA ATPase, CDC48 family GO:0016787 AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 ProSitePatterns PS00674 AAA-protein family signature. 622 640 - T 20-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 ProSitePatterns PS00674 AAA-protein family signature. 347 365 - T 20-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 SUPERFAMILY SSF52540 478 741 3.48E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 Pfam PF02933 Cell division protein 48 (CDC48), domain 2 119 199 8.5E-15 T 20-04-2016 IPR004201 CDC48, domain 2 AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 Gene3D G3DSA:3.40.50.300 208 482 1.7E-93 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 Pfam PF02359 Cell division protein 48 (CDC48), N-terminal domain 18 101 3.1E-24 T 20-04-2016 IPR003338 CDC48, N-terminal subdomain AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 SUPERFAMILY SSF50692 14 100 5.47E-23 T 20-04-2016 IPR009010 Aspartate decarboxylase-like domain AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 SMART SM01073 18 102 6.8E-30 T 20-04-2016 IPR003338 CDC48, N-terminal subdomain AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 Gene3D G3DSA:2.40.40.20 13 101 1.2E-27 T 20-04-2016 AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 PANTHER PTHR23077 18 755 9.2E-293 T 20-04-2016 AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 521 651 5.4E-46 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 247 376 8.4E-45 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 Gene3D G3DSA:1.10.8.60 662 729 1.3E-21 T 20-04-2016 AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 SMART SM00382 243 379 9.5E-23 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 SMART SM00382 516 654 7.6E-22 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 Gene3D G3DSA:3.10.330.10 104 194 1.1E-13 T 20-04-2016 IPR029067 CDC48 domain 2-like AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 SUPERFAMILY SSF52540 208 471 7.84E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 Gene3D G3DSA:3.40.50.300 483 661 4.6E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 SMART SM01072 118 200 6.3E-11 T 20-04-2016 IPR004201 CDC48, domain 2 AMC99_RS13595 4f7fbbe4934d08bed908029e561a97bd 780 SUPERFAMILY SSF54585 103 212 3.27E-16 T 20-04-2016 IPR029067 CDC48 domain 2-like AMC99_RS13750 33e9ca9897bcfcc3b823b167f94551af 286 PANTHER PTHR10992 28 138 1.3E-46 T 20-04-2016 AMC99_RS13750 33e9ca9897bcfcc3b823b167f94551af 286 PANTHER PTHR10992:SF868 28 138 1.3E-46 T 20-04-2016 AMC99_RS13750 33e9ca9897bcfcc3b823b167f94551af 286 PRINTS PR00412 Epoxide hydrolase signature 254 276 8.9E-5 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS13750 33e9ca9897bcfcc3b823b167f94551af 286 PRINTS PR00412 Epoxide hydrolase signature 54 69 8.9E-5 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS13750 33e9ca9897bcfcc3b823b167f94551af 286 PRINTS PR00412 Epoxide hydrolase signature 34 52 8.9E-5 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS13750 33e9ca9897bcfcc3b823b167f94551af 286 Gene3D G3DSA:3.40.50.1820 5 279 4.1E-54 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS13750 33e9ca9897bcfcc3b823b167f94551af 286 Pfam PF12697 Alpha/beta hydrolase family 30 270 3.4E-16 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS13750 33e9ca9897bcfcc3b823b167f94551af 286 SUPERFAMILY SSF53474 3 279 2.49E-43 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS13750 33e9ca9897bcfcc3b823b167f94551af 286 PANTHER PTHR10992:SF868 159 279 1.3E-46 T 20-04-2016 AMC99_RS13750 33e9ca9897bcfcc3b823b167f94551af 286 PANTHER PTHR10992 159 279 1.3E-46 T 20-04-2016 AMC99_RS03770 52f3ff8d4eb16363b18b6dfccb2835e9 246 Gene3D G3DSA:1.10.1060.10 28 140 3.5E-15 T 20-04-2016 AMC99_RS03770 52f3ff8d4eb16363b18b6dfccb2835e9 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 109 120 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_RS03770 52f3ff8d4eb16363b18b6dfccb2835e9 246 Pfam PF13534 4Fe-4S dicluster domain 62 123 3.2E-9 T 20-04-2016 AMC99_RS03770 52f3ff8d4eb16363b18b6dfccb2835e9 246 SUPERFAMILY SSF46548 41 135 9.24E-16 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMC99_RS05000 c0d76a789ab74d66b3dbc7ba2f6d59a5 595 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 40 589 6.4E-156 T 20-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AMC99_RS05000 c0d76a789ab74d66b3dbc7ba2f6d59a5 595 Pfam PF01368 DHH family 93 196 1.6E-11 T 20-04-2016 IPR001667 DDH domain AMC99_RS05000 c0d76a789ab74d66b3dbc7ba2f6d59a5 595 Pfam PF02272 DHHA1 domain 399 463 3.2E-9 T 20-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 AMC99_RS05000 c0d76a789ab74d66b3dbc7ba2f6d59a5 595 PANTHER PTHR30255:SF2 15 592 1.0E-166 T 20-04-2016 AMC99_RS05000 c0d76a789ab74d66b3dbc7ba2f6d59a5 595 PANTHER PTHR30255 15 592 1.0E-166 T 20-04-2016 AMC99_RS05000 c0d76a789ab74d66b3dbc7ba2f6d59a5 595 SUPERFAMILY SSF64182 68 468 1.03E-110 T 20-04-2016 AMC99_RS13575 7951956965b6e668d9d65c937c585a19 220 SUPERFAMILY SSF47240 32 187 2.5E-8 T 20-04-2016 IPR009078 Ferritin-like superfamily AMC99_RS08595 bf6a3079146d40a2e258fc686474ae3d 397 SUPERFAMILY SSF81301 24 153 1.85E-37 T 20-04-2016 AMC99_RS08595 bf6a3079146d40a2e258fc686474ae3d 397 Gene3D G3DSA:1.10.3090.10 154 362 2.5E-37 T 20-04-2016 AMC99_RS08595 bf6a3079146d40a2e258fc686474ae3d 397 Pfam PF01743 Poly A polymerase head domain 34 156 8.3E-31 T 20-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 AMC99_RS08595 bf6a3079146d40a2e258fc686474ae3d 397 SUPERFAMILY SSF81891 154 385 1.31E-41 T 20-04-2016 AMC99_RS08595 bf6a3079146d40a2e258fc686474ae3d 397 PANTHER PTHR13734 18 242 7.3E-63 T 20-04-2016 AMC99_RS08595 bf6a3079146d40a2e258fc686474ae3d 397 Gene3D G3DSA:3.30.460.10 21 152 9.4E-41 T 20-04-2016 AMC99_RS08595 bf6a3079146d40a2e258fc686474ae3d 397 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 186 241 4.9E-9 T 20-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain AMC99_RS12535 1c983a90b9b4af131e638972b27ca924 331 PIRSF PIRSF001415 1 331 2.4E-138 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS12535 1c983a90b9b4af131e638972b27ca924 331 Pfam PF00490 Delta-aminolevulinic acid dehydratase 9 327 6.7E-132 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS12535 1c983a90b9b4af131e638972b27ca924 331 SUPERFAMILY SSF51569 4 330 4.54E-134 T 20-04-2016 AMC99_RS12535 1c983a90b9b4af131e638972b27ca924 331 Gene3D G3DSA:3.20.20.70 4 330 1.3E-140 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS12535 1c983a90b9b4af131e638972b27ca924 331 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 248 260 - T 20-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS12535 1c983a90b9b4af131e638972b27ca924 331 SMART SM01004 5 329 7.5E-221 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS12535 1c983a90b9b4af131e638972b27ca924 331 PANTHER PTHR11458 5 329 2.3E-167 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS12535 1c983a90b9b4af131e638972b27ca924 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 303 322 5.2E-56 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS12535 1c983a90b9b4af131e638972b27ca924 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 273 288 5.2E-56 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS12535 1c983a90b9b4af131e638972b27ca924 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 195 214 5.2E-56 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS12535 1c983a90b9b4af131e638972b27ca924 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 248 264 5.2E-56 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS12535 1c983a90b9b4af131e638972b27ca924 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 126 140 5.2E-56 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS12535 1c983a90b9b4af131e638972b27ca924 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 157 176 5.2E-56 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS04420 b2ffe2888d7646119ddcc2d06b866eb9 301 Gene3D G3DSA:3.40.50.300 3 175 8.7E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04420 b2ffe2888d7646119ddcc2d06b866eb9 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 280 1.3E-72 T 20-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 AMC99_RS04420 b2ffe2888d7646119ddcc2d06b866eb9 301 PANTHER PTHR11649 2 296 1.2E-109 T 20-04-2016 AMC99_RS04420 b2ffe2888d7646119ddcc2d06b866eb9 301 Pfam PF01926 50S ribosome-binding GTPase 12 126 1.7E-21 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS04420 b2ffe2888d7646119ddcc2d06b866eb9 301 SUPERFAMILY SSF52540 11 212 4.91E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04420 b2ffe2888d7646119ddcc2d06b866eb9 301 Gene3D G3DSA:3.30.300.20 190 292 8.8E-34 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta AMC99_RS04420 b2ffe2888d7646119ddcc2d06b866eb9 301 Pfam PF07650 KH domain 222 285 1.2E-16 T 20-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 AMC99_RS04420 b2ffe2888d7646119ddcc2d06b866eb9 301 PANTHER PTHR11649:SF3 2 296 1.2E-109 T 20-04-2016 AMC99_RS04420 b2ffe2888d7646119ddcc2d06b866eb9 301 Hamap MF_00367 GTPase Era [era]. 7 297 32.284 T 20-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 AMC99_RS04420 b2ffe2888d7646119ddcc2d06b866eb9 301 SUPERFAMILY SSF54814 182 299 2.55E-37 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMC99_RS04420 b2ffe2888d7646119ddcc2d06b866eb9 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 162 2.7E-20 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 SMART SM00873 212 384 1.3E-78 T 20-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 SUPERFAMILY SSF56037 197 394 7.59E-68 T 20-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 Pfam PF03483 B3/4 domain 212 384 5.1E-61 T 20-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 Pfam PF03484 tRNA synthetase B5 domain 405 464 2.0E-12 T 20-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 Pfam PF03147 Ferredoxin-fold anticodon binding domain 706 796 7.6E-21 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 Gene3D G3DSA:3.30.70.380 707 796 7.5E-23 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 SUPERFAMILY SSF50249 38 196 3.43E-45 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 796 5.7E-215 T 20-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 Pfam PF01588 Putative tRNA binding domain 45 146 1.4E-24 T 20-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 SUPERFAMILY SSF54991 701 796 1.29E-21 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 SUPERFAMILY SSF46955 401 468 2.38E-12 T 20-04-2016 IPR009061 Putative DNA-binding domain AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 SMART SM00896 704 796 8.0E-32 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 Gene3D G3DSA:3.50.40.10 203 391 1.2E-75 T 20-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 Gene3D G3DSA:3.30.56.20 401 468 3.0E-17 T 20-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 Gene3D G3DSA:3.30.56.10 1 38 1.3E-22 T 20-04-2016 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 Gene3D G3DSA:3.30.56.10 155 182 1.3E-22 T 20-04-2016 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 Gene3D G3DSA:3.30.930.10 485 688 5.3E-57 T 20-04-2016 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 791 39.553 T 20-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 Gene3D G3DSA:2.40.50.140 40 153 5.4E-40 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 SUPERFAMILY SSF55681 461 687 1.29E-38 T 20-04-2016 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 SMART SM00874 400 465 6.1E-19 T 20-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 PANTHER PTHR10947:SF0 2 796 3.5E-232 T 20-04-2016 AMC99_RS13170 f3f4f16247ade0580ee78d81c88d6c84 797 PANTHER PTHR10947 2 796 3.5E-232 T 20-04-2016 AMC99_RS06535 056637364382cfd687700888de8201da 393 PANTHER PTHR22807 109 389 9.9E-77 T 20-04-2016 AMC99_RS06535 056637364382cfd687700888de8201da 393 PANTHER PTHR22807:SF33 109 389 9.9E-77 T 20-04-2016 AMC99_RS06535 056637364382cfd687700888de8201da 393 Gene3D G3DSA:3.40.50.150 188 389 3.5E-46 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS06535 056637364382cfd687700888de8201da 393 Gene3D G3DSA:3.30.70.1170 134 185 5.7E-6 T 20-04-2016 AMC99_RS06535 056637364382cfd687700888de8201da 393 SUPERFAMILY SSF53335 124 389 2.17E-54 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS06535 056637364382cfd687700888de8201da 393 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 374 391 2.5E-24 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS06535 056637364382cfd687700888de8201da 393 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 177 191 2.5E-24 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS06535 056637364382cfd687700888de8201da 393 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 276 288 2.5E-24 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS06535 056637364382cfd687700888de8201da 393 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 206 216 2.5E-24 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS06535 056637364382cfd687700888de8201da 393 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 326 342 2.5E-24 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS06535 056637364382cfd687700888de8201da 393 Pfam PF01189 16S rRNA methyltransferase RsmB/F 202 389 1.1E-37 T 20-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS11065 d5594778f2781cc233e48d4a6950d34f 184 Pfam PF00692 dUTPase 78 180 9.8E-5 T 20-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 AMC99_RS11065 d5594778f2781cc233e48d4a6950d34f 184 Gene3D G3DSA:2.70.40.10 3 183 1.1E-63 T 20-04-2016 IPR029054 dUTPase-like AMC99_RS11065 d5594778f2781cc233e48d4a6950d34f 184 PANTHER PTHR11241 1 184 3.3E-71 T 20-04-2016 AMC99_RS11065 d5594778f2781cc233e48d4a6950d34f 184 PANTHER PTHR11241:SF1 1 184 3.3E-71 T 20-04-2016 AMC99_RS11065 d5594778f2781cc233e48d4a6950d34f 184 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 2 184 29.254 T 20-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 AMC99_RS11065 d5594778f2781cc233e48d4a6950d34f 184 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 3 183 5.3E-50 T 20-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 AMC99_RS11065 d5594778f2781cc233e48d4a6950d34f 184 SUPERFAMILY SSF51283 2 183 3.79E-50 T 20-04-2016 IPR029054 dUTPase-like AMC99_RS09100 a6a94d614db5bf48f392489ba98d2602 296 SUPERFAMILY SSF56176 18 202 9.81E-38 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMC99_RS09100 a6a94d614db5bf48f392489ba98d2602 296 Gene3D G3DSA:3.90.78.10 222 294 5.8E-31 T 20-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09100 a6a94d614db5bf48f392489ba98d2602 296 PANTHER PTHR21071 8 295 1.6E-101 T 20-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09100 a6a94d614db5bf48f392489ba98d2602 296 SUPERFAMILY SSF56194 190 294 3.53E-36 T 20-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09100 a6a94d614db5bf48f392489ba98d2602 296 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 24 293 1.6E-55 T 20-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09100 a6a94d614db5bf48f392489ba98d2602 296 Pfam PF01565 FAD binding domain 33 160 1.4E-15 T 20-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMC99_RS09100 a6a94d614db5bf48f392489ba98d2602 296 Gene3D G3DSA:3.30.465.10 89 221 3.4E-38 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMC99_RS09100 a6a94d614db5bf48f392489ba98d2602 296 PANTHER PTHR21071:SF4 8 295 1.6E-101 T 20-04-2016 AMC99_RS09100 a6a94d614db5bf48f392489ba98d2602 296 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 296 91.872 T 20-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09100 a6a94d614db5bf48f392489ba98d2602 296 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 195 292 8.9E-29 T 20-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09100 a6a94d614db5bf48f392489ba98d2602 296 Gene3D G3DSA:3.30.43.10 10 80 1.1E-14 T 20-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 PANTHER PTHR11911 1 279 8.2E-226 T 20-04-2016 AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 PANTHER PTHR11911 297 481 8.2E-226 T 20-04-2016 AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 6 452 1.7E-188 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 SUPERFAMILY SSF54631 91 202 1.16E-32 T 20-04-2016 AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 Gene3D G3DSA:3.20.20.70 5 481 2.0E-197 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 PIRSF PIRSF000130 1 484 6.8E-199 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 292 304 - T 20-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 SMART SM01240 5 470 0.0 T 20-04-2016 AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 Pfam PF00571 CBS domain 91 139 5.0E-11 T 20-04-2016 IPR000644 CBS domain AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 Pfam PF00571 CBS domain 147 200 7.9E-8 T 20-04-2016 IPR000644 CBS domain AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 PANTHER PTHR11911:SF6 1 279 8.2E-226 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 PANTHER PTHR11911:SF6 297 481 8.2E-226 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 SMART SM00116 155 203 4.0E-7 T 20-04-2016 IPR000644 CBS domain AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 SMART SM00116 94 142 1.8E-11 T 20-04-2016 IPR000644 CBS domain AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 6 483 82.613 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 SUPERFAMILY SSF51412 4 88 6.54E-117 T 20-04-2016 AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 SUPERFAMILY SSF51412 214 474 6.54E-117 T 20-04-2016 AMC99_RS06540 76d78cf7a5ffc40792cc2b2ba14fe771 484 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 6 470 2.5E-155 T 20-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 AMC99_RS07775 ccda9d8b2f1141ef991d2d89df7f42a7 209 Pfam PF13410 Glutathione S-transferase, C-terminal domain 118 180 3.4E-6 T 20-04-2016 AMC99_RS07775 ccda9d8b2f1141ef991d2d89df7f42a7 209 PANTHER PTHR11260 6 180 3.8E-16 T 20-04-2016 AMC99_RS07775 ccda9d8b2f1141ef991d2d89df7f42a7 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 77 4.0E-15 T 20-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_RS07775 ccda9d8b2f1141ef991d2d89df7f42a7 209 SUPERFAMILY SSF47616 89 195 5.99E-16 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS07775 ccda9d8b2f1141ef991d2d89df7f42a7 209 Gene3D G3DSA:3.40.30.10 6 95 1.7E-21 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS07775 ccda9d8b2f1141ef991d2d89df7f42a7 209 Gene3D G3DSA:1.20.1050.10 96 194 2.9E-9 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS07775 ccda9d8b2f1141ef991d2d89df7f42a7 209 SUPERFAMILY SSF52833 6 93 1.8E-19 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS02190 06c19facd4e54880c62ff93f976cffff 172 Gene3D G3DSA:3.30.110.10 84 172 5.7E-41 T 20-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 AMC99_RS02190 06c19facd4e54880c62ff93f976cffff 172 PANTHER PTHR10938 6 172 5.6E-62 T 20-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 AMC99_RS02190 06c19facd4e54880c62ff93f976cffff 172 SUPERFAMILY SSF54364 8 82 1.19E-24 T 20-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 AMC99_RS02190 06c19facd4e54880c62ff93f976cffff 172 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 88 172 2.5E-40 T 20-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 AMC99_RS02190 06c19facd4e54880c62ff93f976cffff 172 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 172 2.9E-61 T 20-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 AMC99_RS02190 06c19facd4e54880c62ff93f976cffff 172 SUPERFAMILY SSF55200 88 172 4.71E-36 T 20-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 AMC99_RS02190 06c19facd4e54880c62ff93f976cffff 172 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 4 172 26.865 T 20-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 AMC99_RS02190 06c19facd4e54880c62ff93f976cffff 172 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 13 78 5.7E-25 T 20-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 AMC99_RS02190 06c19facd4e54880c62ff93f976cffff 172 Gene3D G3DSA:3.10.20.80 7 82 1.8E-28 T 20-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 AMC99_RS01175 6f1428fdb0d64529f5b1989f561f10c2 271 Gene3D G3DSA:3.20.190.10 2 130 9.9E-37 T 20-04-2016 AMC99_RS01175 6f1428fdb0d64529f5b1989f561f10c2 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 113 8.2E-32 T 20-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMC99_RS01175 6f1428fdb0d64529f5b1989f561f10c2 271 PANTHER PTHR22993:SF15 1 271 1.9E-101 T 20-04-2016 AMC99_RS01175 6f1428fdb0d64529f5b1989f561f10c2 271 SMART SM00898 2 114 4.3E-45 T 20-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMC99_RS01175 6f1428fdb0d64529f5b1989f561f10c2 271 SUPERFAMILY SSF81624 2 137 6.41E-37 T 20-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMC99_RS01175 6f1428fdb0d64529f5b1989f561f10c2 271 PANTHER PTHR22993 1 271 1.9E-101 T 20-04-2016 AMC99_RS01175 6f1428fdb0d64529f5b1989f561f10c2 271 SUPERFAMILY SSF57716 218 271 1.37E-12 T 20-04-2016 AMC99_RS01175 6f1428fdb0d64529f5b1989f561f10c2 271 Pfam PF06827 Zinc finger found in FPG and IleRS 250 271 2.8E-7 T 20-04-2016 IPR010663 Zinc finger, FPG/IleRS-type AMC99_RS01175 6f1428fdb0d64529f5b1989f561f10c2 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 40.482 T 20-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AMC99_RS01175 6f1428fdb0d64529f5b1989f561f10c2 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 8.4E-24 T 20-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMC99_RS01175 6f1428fdb0d64529f5b1989f561f10c2 271 SUPERFAMILY SSF46946 131 221 3.93E-27 T 20-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMC99_RS01175 6f1428fdb0d64529f5b1989f561f10c2 271 SMART SM01232 130 222 6.7E-46 T 20-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMC99_RS01175 6f1428fdb0d64529f5b1989f561f10c2 271 Gene3D G3DSA:1.10.8.50 131 271 8.8E-48 T 20-04-2016 AMC99_RS01175 6f1428fdb0d64529f5b1989f561f10c2 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 1.3E-74 T 20-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AMC99_RS07690 d4b032a9585ca06b2eaffff7bc8f17ed 262 PANTHER PTHR30537 1 262 3.6E-46 T 20-04-2016 AMC99_RS07690 d4b032a9585ca06b2eaffff7bc8f17ed 262 Gene3D G3DSA:1.10.10.10 1 87 2.6E-23 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS07690 d4b032a9585ca06b2eaffff7bc8f17ed 262 Pfam PF03466 LysR substrate binding domain 188 261 3.4E-7 T 20-04-2016 IPR005119 LysR, substrate-binding AMC99_RS07690 d4b032a9585ca06b2eaffff7bc8f17ed 262 Pfam PF03466 LysR substrate binding domain 90 172 8.8E-9 T 20-04-2016 IPR005119 LysR, substrate-binding AMC99_RS07690 d4b032a9585ca06b2eaffff7bc8f17ed 262 SUPERFAMILY SSF46785 3 85 1.41E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS07690 d4b032a9585ca06b2eaffff7bc8f17ed 262 Gene3D G3DSA:3.40.190.10 165 226 9.4E-4 T 20-04-2016 AMC99_RS07690 d4b032a9585ca06b2eaffff7bc8f17ed 262 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.1E-19 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_RS07690 d4b032a9585ca06b2eaffff7bc8f17ed 262 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.8E-6 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_RS07690 d4b032a9585ca06b2eaffff7bc8f17ed 262 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.8E-6 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_RS07690 d4b032a9585ca06b2eaffff7bc8f17ed 262 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.8E-6 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_RS07690 d4b032a9585ca06b2eaffff7bc8f17ed 262 SUPERFAMILY SSF53850 84 261 1.99E-16 T 20-04-2016 AMC99_RS07690 d4b032a9585ca06b2eaffff7bc8f17ed 262 Gene3D G3DSA:3.40.190.10 97 164 2.7E-11 T 20-04-2016 AMC99_RS05520 dafb4e489da04bab5283d8ffd6318f46 295 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 8 51 3.4E-8 T 20-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AMC99_RS05520 dafb4e489da04bab5283d8ffd6318f46 295 SUPERFAMILY SSF55785 80 173 8.83E-9 T 20-04-2016 IPR000014 PAS domain AMC99_RS05520 dafb4e489da04bab5283d8ffd6318f46 295 Gene3D G3DSA:3.30.450.20 197 271 7.1E-5 T 20-04-2016 AMC99_RS05520 dafb4e489da04bab5283d8ffd6318f46 295 Pfam PF13426 PAS domain 203 267 0.35 T 20-04-2016 IPR000014 PAS domain AMC99_RS05520 dafb4e489da04bab5283d8ffd6318f46 295 SUPERFAMILY SSF143120 8 57 2.09E-8 T 20-04-2016 AMC99_RS05520 dafb4e489da04bab5283d8ffd6318f46 295 SMART SM00091 185 251 1.5 T 20-04-2016 IPR000014 PAS domain AMC99_RS05520 dafb4e489da04bab5283d8ffd6318f46 295 SMART SM00091 67 133 2.4 T 20-04-2016 IPR000014 PAS domain AMC99_RS05520 dafb4e489da04bab5283d8ffd6318f46 295 Gene3D G3DSA:3.40.1620.10 15 52 1.7E-7 T 20-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AMC99_RS05520 dafb4e489da04bab5283d8ffd6318f46 295 Gene3D G3DSA:3.30.450.20 70 172 8.7E-13 T 20-04-2016 AMC99_RS05520 dafb4e489da04bab5283d8ffd6318f46 295 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 7 66 5.9E-8 T 20-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AMC99_RS05520 dafb4e489da04bab5283d8ffd6318f46 295 Pfam PF08448 PAS fold 78 174 6.6E-6 T 20-04-2016 IPR013656 PAS fold-4 AMC99_RS05520 dafb4e489da04bab5283d8ffd6318f46 295 SUPERFAMILY SSF55785 196 290 2.27E-6 T 20-04-2016 IPR000014 PAS domain AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 SUPERFAMILY SSF46548 2 154 3.14E-42 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 PANTHER PTHR11938:SF75 42 322 1.2E-135 T 20-04-2016 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 PANTHER PTHR11938:SF75 338 471 1.2E-135 T 20-04-2016 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 SUPERFAMILY SSF51971 142 403 7.06E-64 T 20-04-2016 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 SUPERFAMILY SSF51971 369 475 6.12E-12 T 20-04-2016 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 Gene3D G3DSA:3.50.50.60 147 240 9.0E-24 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 Gene3D G3DSA:3.50.50.60 390 474 3.5E-23 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 459 2.4E-30 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 PANTHER PTHR11938 42 322 1.2E-135 T 20-04-2016 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 PANTHER PTHR11938 338 471 1.2E-135 T 20-04-2016 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 Gene3D G3DSA:3.50.50.60 241 389 2.5E-41 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 Gene3D G3DSA:1.10.1060.10 5 146 1.9E-42 T 20-04-2016 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 PRINTS PR00419 Adrenodoxin reductase family signature 289 303 8.0E-24 T 20-04-2016 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 PRINTS PR00419 Adrenodoxin reductase family signature 210 220 8.0E-24 T 20-04-2016 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 8.0E-24 T 20-04-2016 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 8.0E-24 T 20-04-2016 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 477 5.7E-212 T 20-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 AMC99_RS11605 40fde7e998363c6c9dc82051b3c576a6 478 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 33 130 1.9E-24 T 20-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II AMC99_RS12675 4bf68219e736d874ba9a051ac57852b4 375 PANTHER PTHR12526:SF373 128 371 6.0E-41 T 20-04-2016 AMC99_RS12675 4bf68219e736d874ba9a051ac57852b4 375 Pfam PF00534 Glycosyl transferases group 1 192 351 3.1E-20 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 AMC99_RS12675 4bf68219e736d874ba9a051ac57852b4 375 SUPERFAMILY SSF53756 22 371 1.03E-56 T 20-04-2016 AMC99_RS12675 4bf68219e736d874ba9a051ac57852b4 375 PANTHER PTHR12526 128 371 6.0E-41 T 20-04-2016 AMC99_RS12675 4bf68219e736d874ba9a051ac57852b4 375 Gene3D G3DSA:3.40.50.2000 193 350 4.8E-15 T 20-04-2016 AMC99_RS12675 4bf68219e736d874ba9a051ac57852b4 375 Pfam PF13477 Glycosyl transferase 4-like 14 152 1.7E-16 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMC99_RS07320 34a2c3f3ef6c9d45b5e73650999e2c3d 317 PANTHER PTHR30472:SF3 11 317 1.8E-76 T 20-04-2016 AMC99_RS07320 34a2c3f3ef6c9d45b5e73650999e2c3d 317 Pfam PF01032 FecCD transport family 11 311 1.2E-71 T 20-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 AMC99_RS07320 34a2c3f3ef6c9d45b5e73650999e2c3d 317 SUPERFAMILY SSF81345 5 311 5.49E-66 T 20-04-2016 IPR029022 ABC transporter, BtuC-like AMC99_RS07320 34a2c3f3ef6c9d45b5e73650999e2c3d 317 Gene3D G3DSA:1.10.3470.10 5 315 2.8E-83 T 20-04-2016 IPR029022 ABC transporter, BtuC-like AMC99_RS07320 34a2c3f3ef6c9d45b5e73650999e2c3d 317 PANTHER PTHR30472 11 317 1.8E-76 T 20-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 AMC99_RS02150 af0094cc37ece0b2957c019c2edf1b1d 463 Pfam PF07676 WD40-like Beta Propeller Repeat 236 260 0.006 T 20-04-2016 IPR011659 WD40-like Beta Propeller AMC99_RS02150 af0094cc37ece0b2957c019c2edf1b1d 463 Pfam PF07676 WD40-like Beta Propeller Repeat 401 435 0.0011 T 20-04-2016 IPR011659 WD40-like Beta Propeller AMC99_RS02150 af0094cc37ece0b2957c019c2edf1b1d 463 Pfam PF07676 WD40-like Beta Propeller Repeat 271 304 7.4E-6 T 20-04-2016 IPR011659 WD40-like Beta Propeller AMC99_RS02150 af0094cc37ece0b2957c019c2edf1b1d 463 Pfam PF07676 WD40-like Beta Propeller Repeat 314 343 4.1E-9 T 20-04-2016 IPR011659 WD40-like Beta Propeller AMC99_RS02150 af0094cc37ece0b2957c019c2edf1b1d 463 SUPERFAMILY SSF52964 52 190 8.63E-30 T 20-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMC99_RS02150 af0094cc37ece0b2957c019c2edf1b1d 463 Hamap MF_00671 Protein TolB [tolB]. 1 458 27.476 T 20-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AMC99_RS02150 af0094cc37ece0b2957c019c2edf1b1d 463 SUPERFAMILY SSF69304 191 460 4.58E-55 T 20-04-2016 AMC99_RS02150 af0094cc37ece0b2957c019c2edf1b1d 463 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 55 459 1.6E-121 T 20-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AMC99_RS02150 af0094cc37ece0b2957c019c2edf1b1d 463 Gene3D G3DSA:3.40.50.10070 51 180 3.5E-35 T 20-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMC99_RS02150 af0094cc37ece0b2957c019c2edf1b1d 463 Pfam PF04052 TolB amino-terminal domain 55 159 3.7E-15 T 20-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMC99_RS02150 af0094cc37ece0b2957c019c2edf1b1d 463 PANTHER PTHR36842 38 461 1.1E-40 T 20-04-2016 AMC99_RS02150 af0094cc37ece0b2957c019c2edf1b1d 463 Gene3D G3DSA:2.130.10.10 181 460 2.4E-72 T 20-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AMC99_RS09325 edb4ea4d71a4e4d2723a78c3045297f2 144 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 69 1.3E-20 T 20-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AMC99_RS09325 edb4ea4d71a4e4d2723a78c3045297f2 144 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 136 13.894 T 20-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AMC99_RS09325 edb4ea4d71a4e4d2723a78c3045297f2 144 PANTHER PTHR33162:SF1 1 72 1.7E-18 T 20-04-2016 AMC99_RS09325 edb4ea4d71a4e4d2723a78c3045297f2 144 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 6.12E-13 T 20-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AMC99_RS09325 edb4ea4d71a4e4d2723a78c3045297f2 144 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 6.12E-13 T 20-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AMC99_RS09325 edb4ea4d71a4e4d2723a78c3045297f2 144 PANTHER PTHR33162 1 72 1.7E-18 T 20-04-2016 AMC99_RS09325 edb4ea4d71a4e4d2723a78c3045297f2 144 Pfam PF02416 mttA/Hcf106 family 4 36 7.6E-6 T 20-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AMC99_RS09800 6e2e1105e6141958f324bf89ea6ecf6d 462 SUPERFAMILY SSF52540 3 163 3.1E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09800 6e2e1105e6141958f324bf89ea6ecf6d 462 PANTHER PTHR11649:SF68 5 451 3.0E-164 T 20-04-2016 AMC99_RS09800 6e2e1105e6141958f324bf89ea6ecf6d 462 Pfam PF01926 50S ribosome-binding GTPase 4 120 1.3E-26 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS09800 6e2e1105e6141958f324bf89ea6ecf6d 462 Pfam PF01926 50S ribosome-binding GTPase 191 314 3.2E-20 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS09800 6e2e1105e6141958f324bf89ea6ecf6d 462 PIRSF PIRSF006485 1 460 8.8E-154 T 20-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 AMC99_RS09800 6e2e1105e6141958f324bf89ea6ecf6d 462 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 189 359 3.4E-22 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_RS09800 6e2e1105e6141958f324bf89ea6ecf6d 462 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 125 7.2E-25 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_RS09800 6e2e1105e6141958f324bf89ea6ecf6d 462 Gene3D G3DSA:3.30.300.20 378 453 2.1E-29 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta AMC99_RS09800 6e2e1105e6141958f324bf89ea6ecf6d 462 SUPERFAMILY SSF52540 138 458 3.53E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09800 6e2e1105e6141958f324bf89ea6ecf6d 462 Gene3D G3DSA:3.40.50.300 2 167 9.9E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09800 6e2e1105e6141958f324bf89ea6ecf6d 462 Gene3D G3DSA:3.40.50.300 188 377 1.7E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09800 6e2e1105e6141958f324bf89ea6ecf6d 462 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 372 452 8.6E-29 T 20-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like AMC99_RS09800 6e2e1105e6141958f324bf89ea6ecf6d 462 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 452 4.9E-158 T 20-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 AMC99_RS09800 6e2e1105e6141958f324bf89ea6ecf6d 462 PANTHER PTHR11649 5 451 3.0E-164 T 20-04-2016 AMC99_RS09800 6e2e1105e6141958f324bf89ea6ecf6d 462 Hamap MF_00195 GTPase Der [der]. 2 455 36.196 T 20-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 AMC99_RS01170 f96817ba9eb6ab811acd86c57e11878d 86 PANTHER PTHR33398 1 86 5.6E-24 T 20-04-2016 AMC99_RS01170 f96817ba9eb6ab811acd86c57e11878d 86 Pfam PF01649 Ribosomal protein S20 2 83 2.2E-24 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS01170 f96817ba9eb6ab811acd86c57e11878d 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 83 2.0E-14 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS01170 f96817ba9eb6ab811acd86c57e11878d 86 SUPERFAMILY SSF46992 3 86 3.53E-26 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS01170 f96817ba9eb6ab811acd86c57e11878d 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 84 8.9E-21 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS01170 f96817ba9eb6ab811acd86c57e11878d 86 Gene3D G3DSA:1.20.58.110 1 86 4.2E-27 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS01170 f96817ba9eb6ab811acd86c57e11878d 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.381 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 SUPERFAMILY SSF55681 3 245 1.24E-105 T 20-04-2016 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 SMART SM00863 654 704 5.0E-19 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 1.9E-31 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 1.9E-31 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 1.9E-31 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 1.9E-31 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 1.9E-31 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 PANTHER PTHR11777 1 888 0.0 T 20-04-2016 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 PANTHER PTHR11777:SF9 1 888 0.0 T 20-04-2016 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 866 7.0E-282 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 704 1.3E-15 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 SUPERFAMILY SSF55186 553 715 7.72E-49 T 20-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 888 194.762 T 20-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 Pfam PF02272 DHHA1 domain 811 880 4.2E-12 T 20-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 Gene3D G3DSA:3.30.930.10 2 242 1.1E-110 T 20-04-2016 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 SUPERFAMILY SSF50447 453 553 8.49E-18 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 Pfam PF01411 tRNA synthetases class II (A) 6 556 7.8E-213 T 20-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AMC99_RS07145 119b5dacdb501196652dea2f8593151c 888 SUPERFAMILY SSF101353 246 460 5.36E-60 T 20-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMC99_RS05245 de9b3d8cd70a868564660f57ce2f2564 158 Gene3D G3DSA:3.10.50.30 78 157 1.2E-27 T 20-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMC99_RS05245 de9b3d8cd70a868564660f57ce2f2564 158 Pfam PF03449 Transcription elongation factor, N-terminal 7 76 1.2E-28 T 20-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMC99_RS05245 de9b3d8cd70a868564660f57ce2f2564 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 156 3.3E-55 T 20-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AMC99_RS05245 de9b3d8cd70a868564660f57ce2f2564 158 PANTHER PTHR30437 1 157 2.3E-59 T 20-04-2016 AMC99_RS05245 de9b3d8cd70a868564660f57ce2f2564 158 Gene3D G3DSA:1.10.287.180 4 77 7.1E-30 T 20-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMC99_RS05245 de9b3d8cd70a868564660f57ce2f2564 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 156 1.3E-25 T 20-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMC99_RS05245 de9b3d8cd70a868564660f57ce2f2564 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 20-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMC99_RS05245 de9b3d8cd70a868564660f57ce2f2564 158 SUPERFAMILY SSF46557 5 79 3.92E-26 T 20-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMC99_RS05245 de9b3d8cd70a868564660f57ce2f2564 158 SUPERFAMILY SSF54534 83 157 6.73E-22 T 20-04-2016 AMC99_RS05245 de9b3d8cd70a868564660f57ce2f2564 158 PIRSF PIRSF006092 1 158 3.9E-50 T 20-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AMC99_RS05245 de9b3d8cd70a868564660f57ce2f2564 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 156 30.847 T 20-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AMC99_RS12155 4eb109a14c959225bc908dcfa52c16dd 408 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 20-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMC99_RS12155 4eb109a14c959225bc908dcfa52c16dd 408 Pfam PF00266 Aminotransferase class-V 26 391 5.6E-137 T 20-04-2016 IPR000192 Aminotransferase class V domain AMC99_RS12155 4eb109a14c959225bc908dcfa52c16dd 408 PANTHER PTHR11601 3 407 4.1E-177 T 20-04-2016 AMC99_RS12155 4eb109a14c959225bc908dcfa52c16dd 408 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 9 404 5.1E-162 T 20-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AMC99_RS12155 4eb109a14c959225bc908dcfa52c16dd 408 PANTHER PTHR11601:SF17 3 407 4.1E-177 T 20-04-2016 AMC99_RS12155 4eb109a14c959225bc908dcfa52c16dd 408 Gene3D G3DSA:3.90.1150.10 284 397 3.1E-28 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS12155 4eb109a14c959225bc908dcfa52c16dd 408 Gene3D G3DSA:3.40.640.10 36 283 1.4E-86 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS12155 4eb109a14c959225bc908dcfa52c16dd 408 SUPERFAMILY SSF53383 9 399 1.2E-121 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS09185 a4afee2f9cc96996d302129709d51193 657 PANTHER PTHR11731:SF140 260 635 9.1E-142 T 20-04-2016 AMC99_RS09185 a4afee2f9cc96996d302129709d51193 657 Pfam PF00326 Prolyl oligopeptidase family 414 625 3.9E-44 T 20-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMC99_RS09185 a4afee2f9cc96996d302129709d51193 657 SUPERFAMILY SSF53474 361 624 2.94E-69 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS09185 a4afee2f9cc96996d302129709d51193 657 PANTHER PTHR11731:SF140 13 113 9.1E-142 T 20-04-2016 AMC99_RS09185 a4afee2f9cc96996d302129709d51193 657 PANTHER PTHR11731 13 113 9.1E-142 T 20-04-2016 AMC99_RS09185 a4afee2f9cc96996d302129709d51193 657 SUPERFAMILY SSF69304 31 259 9.68E-16 T 20-04-2016 AMC99_RS09185 a4afee2f9cc96996d302129709d51193 657 Gene3D G3DSA:2.120.10.60 30 257 1.0E-13 T 20-04-2016 AMC99_RS09185 a4afee2f9cc96996d302129709d51193 657 PANTHER PTHR11731 260 635 9.1E-142 T 20-04-2016 AMC99_RS09185 a4afee2f9cc96996d302129709d51193 657 Gene3D G3DSA:3.40.50.1820 306 624 2.8E-88 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 SUPERFAMILY SSF52540 859 884 1.2E-92 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 SUPERFAMILY SSF52540 342 521 1.2E-92 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 SUPERFAMILY SSF52540 565 818 1.2E-92 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 SUPERFAMILY SSF52540 114 167 1.2E-92 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 SUPERFAMILY SSF52540 6 75 1.2E-92 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 TIGRFAM TIGR02784 addA_alphas: double-strand break repair helicase AddA 11 1133 1.9E-293 T 20-04-2016 IPR014151 DNA helicase, AddA type AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 Pfam PF12705 PD-(D/E)XK nuclease superfamily 979 1130 1.2E-11 T 20-04-2016 AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 Pfam PF13361 UvrD-like helicase C-terminal domain 772 879 2.5E-11 T 20-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 SUPERFAMILY SSF52980 968 1114 1.23E-5 T 20-04-2016 IPR011335 Restriction endonuclease type II-like AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 Gene3D G3DSA:3.40.50.300 494 625 3.9E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 Gene3D G3DSA:3.40.50.300 779 920 3.9E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 465 7.1E-44 T 20-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 Gene3D G3DSA:3.40.50.300 352 466 8.3E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 Gene3D G3DSA:3.40.50.300 122 184 8.3E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 Gene3D G3DSA:3.40.50.300 12 71 8.3E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 PANTHER PTHR11070 12 84 1.2E-68 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 PANTHER PTHR11070 321 468 1.2E-68 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 PANTHER PTHR11070 114 207 1.2E-68 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 PANTHER PTHR11070 486 837 1.2E-68 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 PANTHER PTHR11070 858 879 1.2E-68 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMC99_RS04630 da68201791e2079575c6a91814d0e888 1149 Gene3D G3DSA:1.10.486.10 637 768 2.6E-6 T 20-04-2016 AMC99_RS07140 e75ff2bbb74dccd5f6fd23d77a884b2d 586 PANTHER PTHR16254 8 572 5.1E-129 T 20-04-2016 AMC99_RS07140 e75ff2bbb74dccd5f6fd23d77a884b2d 586 Gene3D G3DSA:3.40.50.720 411 542 1.7E-31 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS07140 e75ff2bbb74dccd5f6fd23d77a884b2d 586 Pfam PF00999 Sodium/hydrogen exchanger family 17 386 2.1E-48 T 20-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMC99_RS07140 e75ff2bbb74dccd5f6fd23d77a884b2d 586 SUPERFAMILY SSF51735 413 542 2.3E-27 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS07140 e75ff2bbb74dccd5f6fd23d77a884b2d 586 PANTHER PTHR16254:SF6 8 572 5.1E-129 T 20-04-2016 AMC99_RS07140 e75ff2bbb74dccd5f6fd23d77a884b2d 586 Pfam PF02254 TrkA-N domain 415 527 6.9E-22 T 20-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMC99_RS03400 d8014f1963125bfb59133509fe207d85 106 SUPERFAMILY SSF57716 76 105 2.57E-7 T 20-04-2016 AMC99_RS03400 d8014f1963125bfb59133509fe207d85 106 PANTHER PTHR33823 1 104 6.1E-20 T 20-04-2016 AMC99_RS03400 d8014f1963125bfb59133509fe207d85 106 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 74 105 5.3E-12 T 20-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMC99_RS08890 080a2886a850a3952f8b7e98dfa21f36 404 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 77 272 1.0E-43 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_RS08890 080a2886a850a3952f8b7e98dfa21f36 404 SUPERFAMILY SSF53335 76 398 3.14E-73 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS08890 080a2886a850a3952f8b7e98dfa21f36 404 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 201 215 1.01E-16 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_RS08890 080a2886a850a3952f8b7e98dfa21f36 404 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 75 91 1.01E-16 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_RS08890 080a2886a850a3952f8b7e98dfa21f36 404 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 248 261 1.01E-16 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_RS08890 080a2886a850a3952f8b7e98dfa21f36 404 Pfam PF00145 C-5 cytosine-specific DNA methylase 77 268 1.4E-42 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS08890 080a2886a850a3952f8b7e98dfa21f36 404 Pfam PF00145 C-5 cytosine-specific DNA methylase 327 396 6.3E-14 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS08890 080a2886a850a3952f8b7e98dfa21f36 404 Gene3D G3DSA:3.90.120.10 342 384 6.6E-8 T 20-04-2016 AMC99_RS08890 080a2886a850a3952f8b7e98dfa21f36 404 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 378 396 - T 20-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 AMC99_RS08890 080a2886a850a3952f8b7e98dfa21f36 404 PANTHER PTHR10629 76 400 1.9E-48 T 20-04-2016 AMC99_RS08890 080a2886a850a3952f8b7e98dfa21f36 404 Gene3D G3DSA:3.40.50.150 74 290 1.3E-47 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 PANTHER PTHR40980 845 1021 7.3E-125 T 20-04-2016 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 PANTHER PTHR40980 28 266 7.3E-125 T 20-04-2016 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 PANTHER PTHR40980 283 803 7.3E-125 T 20-04-2016 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 Pfam PF00593 TonB dependent receptor 692 1019 5.2E-29 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 166 8.5E-19 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 Gene3D G3DSA:2.170.130.10 63 177 2.9E-22 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 SUPERFAMILY SSF56935 315 528 7.33E-86 T 20-04-2016 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 SUPERFAMILY SSF56935 37 242 7.33E-86 T 20-04-2016 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 SUPERFAMILY SSF56935 595 786 7.33E-86 T 20-04-2016 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 SUPERFAMILY SSF56935 861 1019 7.33E-86 T 20-04-2016 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 46 1020 1.1E-182 T 20-04-2016 IPR010104 Bacterial TonB-dependent receptor AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 PANTHER PTHR40980:SF2 845 1021 7.3E-125 T 20-04-2016 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 PANTHER PTHR40980:SF2 28 266 7.3E-125 T 20-04-2016 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 PANTHER PTHR40980:SF2 283 803 7.3E-125 T 20-04-2016 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 Gene3D G3DSA:2.40.170.20 178 257 1.2E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 Gene3D G3DSA:2.40.170.20 836 1019 1.2E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 Gene3D G3DSA:2.40.170.20 466 549 1.2E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 Gene3D G3DSA:2.40.170.20 685 785 1.2E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 Gene3D G3DSA:2.40.170.20 296 432 1.2E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS11985 22fc1126a8b0309f53d34217440475bd 1021 Gene3D G3DSA:2.40.170.20 613 648 1.2E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02755 257d2603644e8bea8c48ea44dd27b643 319 PANTHER PTHR10992 210 318 1.3E-96 T 20-04-2016 AMC99_RS02755 257d2603644e8bea8c48ea44dd27b643 319 SUPERFAMILY SSF53474 3 318 5.97E-66 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS02755 257d2603644e8bea8c48ea44dd27b643 319 Gene3D G3DSA:3.40.50.1820 2 318 4.9E-79 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS02755 257d2603644e8bea8c48ea44dd27b643 319 PANTHER PTHR10992:SF305 210 318 1.3E-96 T 20-04-2016 AMC99_RS02755 257d2603644e8bea8c48ea44dd27b643 319 Pfam PF00561 alpha/beta hydrolase fold 23 303 4.0E-22 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS02755 257d2603644e8bea8c48ea44dd27b643 319 PANTHER PTHR10992 2 166 1.3E-96 T 20-04-2016 AMC99_RS02755 257d2603644e8bea8c48ea44dd27b643 319 PRINTS PR00412 Epoxide hydrolase signature 49 64 4.8E-27 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS02755 257d2603644e8bea8c48ea44dd27b643 319 PRINTS PR00412 Epoxide hydrolase signature 110 123 4.8E-27 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS02755 257d2603644e8bea8c48ea44dd27b643 319 PRINTS PR00412 Epoxide hydrolase signature 29 47 4.8E-27 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS02755 257d2603644e8bea8c48ea44dd27b643 319 PRINTS PR00412 Epoxide hydrolase signature 293 315 4.8E-27 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS02755 257d2603644e8bea8c48ea44dd27b643 319 PRINTS PR00412 Epoxide hydrolase signature 96 109 4.8E-27 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS02755 257d2603644e8bea8c48ea44dd27b643 319 PANTHER PTHR10992:SF305 2 166 1.3E-96 T 20-04-2016 AMC99_RS01635 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 SMART SM01018 308 391 6.7E-45 T 20-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMC99_RS01635 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Pfam PF00809 Pterin binding enzyme 14 251 8.6E-57 T 20-04-2016 IPR000489 Pterin-binding domain GO:0042558 AMC99_RS01635 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Gene3D G3DSA:3.20.20.20 10 289 3.2E-114 T 20-04-2016 IPR000489 Pterin-binding domain GO:0042558 AMC99_RS01635 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 588 853 3.9E-112 T 20-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMC99_RS01635 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Gene3D G3DSA:3.10.196.10 608 868 2.2E-96 T 20-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMC99_RS01635 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 PIRSF PIRSF000381 1 840 0.0 T 20-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMC99_RS01635 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Pfam PF02310 B12 binding domain 400 492 5.5E-20 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMC99_RS01635 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 TIGRFAM TIGR02082 metH: methionine synthase 6 837 0.0 T 20-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMC99_RS01635 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Gene3D G3DSA:3.40.50.280 396 545 1.8E-62 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMC99_RS01635 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 SUPERFAMILY SSF47644 304 390 1.7E-28 T 20-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMC99_RS01635 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Gene3D G3DSA:1.10.1240.10 302 388 4.3E-38 T 20-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMC99_RS01635 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 SUPERFAMILY SSF56507 555 868 4.32E-112 T 20-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMC99_RS01635 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Pfam PF02607 B12 binding domain 310 383 1.4E-25 T 20-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMC99_RS01635 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 SUPERFAMILY SSF52242 394 544 1.03E-46 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMC99_RS01635 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 SUPERFAMILY SSF51717 10 283 8.24E-91 T 20-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 AMC99_RS07600 1f08779a3371c8066c97db4e35a1445f 720 SUPERFAMILY SSF90123 154 469 4.97E-54 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMC99_RS07600 1f08779a3371c8066c97db4e35a1445f 720 PANTHER PTHR24221 158 715 2.6E-157 T 20-04-2016 AMC99_RS07600 1f08779a3371c8066c97db4e35a1445f 720 Pfam PF00664 ABC transporter transmembrane region 174 434 5.4E-23 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMC99_RS07600 1f08779a3371c8066c97db4e35a1445f 720 Gene3D G3DSA:1.20.1560.10 159 467 3.0E-50 T 20-04-2016 AMC99_RS07600 1f08779a3371c8066c97db4e35a1445f 720 SMART SM00382 512 699 6.6E-15 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS07600 1f08779a3371c8066c97db4e35a1445f 720 SUPERFAMILY SSF52540 478 712 4.61E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07600 1f08779a3371c8066c97db4e35a1445f 720 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 15 715 1.9E-217 T 20-04-2016 IPR017750 ATPase, type I secretion system AMC99_RS07600 1f08779a3371c8066c97db4e35a1445f 720 PANTHER PTHR24221:SF248 158 715 2.6E-157 T 20-04-2016 AMC99_RS07600 1f08779a3371c8066c97db4e35a1445f 720 Pfam PF00005 ABC transporter 503 651 2.0E-25 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS07600 1f08779a3371c8066c97db4e35a1445f 720 Gene3D G3DSA:3.40.50.300 485 713 2.2E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07600 1f08779a3371c8066c97db4e35a1445f 720 Gene3D G3DSA:3.90.70.10 12 137 3.9E-10 T 20-04-2016 AMC99_RS03695 f69cfd26e629ebf85650731e1c1b23e9 109 Pfam PF00581 Rhodanese-like domain 14 102 8.8E-12 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS03695 f69cfd26e629ebf85650731e1c1b23e9 109 SMART SM00450 13 106 8.8E-17 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS03695 f69cfd26e629ebf85650731e1c1b23e9 109 ProSitePatterns PS00380 Rhodanese signature 1. 38 49 - T 20-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AMC99_RS03695 f69cfd26e629ebf85650731e1c1b23e9 109 Gene3D G3DSA:3.40.250.10 6 109 8.7E-26 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS03695 f69cfd26e629ebf85650731e1c1b23e9 109 SUPERFAMILY SSF52821 6 108 1.7E-27 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS04370 d7d5b1f9cb546a2453a8c2f99fbc556c 406 Gene3D G3DSA:3.90.1150.10 282 397 6.7E-27 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS04370 d7d5b1f9cb546a2453a8c2f99fbc556c 406 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 2 402 1.5E-201 T 20-04-2016 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: REACT_9431|UniPathway: UPA00251 AMC99_RS04370 d7d5b1f9cb546a2453a8c2f99fbc556c 406 PANTHER PTHR13693:SF57 2 402 5.6E-229 T 20-04-2016 AMC99_RS04370 d7d5b1f9cb546a2453a8c2f99fbc556c 406 SUPERFAMILY SSF53383 3 399 4.12E-117 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS04370 d7d5b1f9cb546a2453a8c2f99fbc556c 406 Pfam PF00155 Aminotransferase class I and II 47 391 1.2E-82 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMC99_RS04370 d7d5b1f9cb546a2453a8c2f99fbc556c 406 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 245 254 - T 20-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AMC99_RS04370 d7d5b1f9cb546a2453a8c2f99fbc556c 406 Gene3D G3DSA:3.40.640.10 64 281 5.6E-92 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS04370 d7d5b1f9cb546a2453a8c2f99fbc556c 406 PANTHER PTHR13693 2 402 5.6E-229 T 20-04-2016 AMC99_RS08305 432659bd04c6a6c4800cb0391cbd275e 136 SUPERFAMILY SSF54637 5 133 1.74E-34 T 20-04-2016 IPR029069 HotDog domain AMC99_RS08305 432659bd04c6a6c4800cb0391cbd275e 136 Gene3D G3DSA:3.10.129.10 6 132 5.7E-33 T 20-04-2016 IPR029069 HotDog domain AMC99_RS08305 432659bd04c6a6c4800cb0391cbd275e 136 Pfam PF03061 Thioesterase superfamily 24 105 9.2E-11 T 20-04-2016 IPR006683 Thioesterase domain AMC99_RS08305 432659bd04c6a6c4800cb0391cbd275e 136 PANTHER PTHR31793 9 132 3.4E-26 T 20-04-2016 AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 SUPERFAMILY SSF52540 213 350 2.95E-27 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 Gene3D G3DSA:3.40.50.300 212 242 6.8E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 Pfam PF01926 50S ribosome-binding GTPase 215 300 2.1E-21 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 3 425 27.942 T 20-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 SUPERFAMILY SSF116878 354 425 9.42E-33 T 20-04-2016 AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 SUPERFAMILY SSF116878 119 217 9.42E-33 T 20-04-2016 AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 SUPERFAMILY SSF103025 3 118 1.26E-35 T 20-04-2016 AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 Gene3D G3DSA:3.30.1360.120 2 119 1.6E-39 T 20-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 PANTHER PTHR11649 6 425 6.1E-121 T 20-04-2016 AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 Gene3D G3DSA:1.20.120.430 243 268 1.3E-43 T 20-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 Gene3D G3DSA:1.20.120.430 359 425 1.3E-43 T 20-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 Gene3D G3DSA:1.20.120.430 120 180 1.3E-43 T 20-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 Pfam PF12631 MnmE helical domain 121 422 3.0E-32 T 20-04-2016 IPR025867 MnmE, helical domain AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 Pfam PF10396 GTP-binding protein TrmE N-terminus 4 118 2.9E-34 T 20-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 PANTHER PTHR11649:SF56 6 425 6.1E-121 T 20-04-2016 AMC99_RS12435 d685497f78e8bcc86a4c18ac46d07768 425 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 214 303 2.7E-17 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_RS08340 5252a12cdc6190e108718efd207cfd0d 77 PANTHER PTHR12735 1 77 1.6E-12 T 20-04-2016 AMC99_RS08340 5252a12cdc6190e108718efd207cfd0d 77 PANTHER PTHR12735:SF3 1 77 1.6E-12 T 20-04-2016 AMC99_RS08340 5252a12cdc6190e108718efd207cfd0d 77 Gene3D G3DSA:3.30.300.90 1 76 2.5E-20 T 20-04-2016 IPR002634 BolA protein AMC99_RS08340 5252a12cdc6190e108718efd207cfd0d 77 Pfam PF01722 BolA-like protein 27 76 1.7E-14 T 20-04-2016 IPR002634 BolA protein AMC99_RS08340 5252a12cdc6190e108718efd207cfd0d 77 SUPERFAMILY SSF82657 1 76 7.19E-23 T 20-04-2016 IPR002634 BolA protein AMC99_RS08340 5252a12cdc6190e108718efd207cfd0d 77 PIRSF PIRSF003113 1 77 6.7E-18 T 20-04-2016 IPR002634 BolA protein AMC99_RS10215 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 Gene3D G3DSA:1.20.140.10 238 402 3.7E-48 T 20-04-2016 AMC99_RS10215 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 PANTHER PTHR10909:SF282 1 402 2.3E-203 T 20-04-2016 AMC99_RS10215 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 236 4.2E-19 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS10215 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 SUPERFAMILY SSF56645 3 261 6.41E-65 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS10215 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 Gene3D G3DSA:2.40.110.10 134 237 1.3E-37 T 20-04-2016 AMC99_RS10215 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 Gene3D G3DSA:1.10.540.10 2 133 8.3E-33 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS10215 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 130 7.4E-16 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS10215 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 SUPERFAMILY SSF47203 247 401 1.03E-41 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS10215 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 PANTHER PTHR10909 1 402 2.3E-203 T 20-04-2016 AMC99_RS10215 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 248 397 1.6E-36 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS03250 c0eb804c19ff2fae129755cae9bafc6a 809 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 118 127 - T 20-04-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 AMC99_RS03250 c0eb804c19ff2fae129755cae9bafc6a 809 PIRSF PIRSF005496 1 805 4.3E-259 T 20-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type AMC99_RS03250 c0eb804c19ff2fae129755cae9bafc6a 809 Pfam PF00271 Helicase conserved C-terminal domain 210 328 1.1E-9 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS03250 c0eb804c19ff2fae129755cae9bafc6a 809 Gene3D G3DSA:3.40.50.300 4 161 2.1E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03250 c0eb804c19ff2fae129755cae9bafc6a 809 SMART SM00487 5 187 5.3E-19 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_RS03250 c0eb804c19ff2fae129755cae9bafc6a 809 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 802 1.9E-231 T 20-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type AMC99_RS03250 c0eb804c19ff2fae129755cae9bafc6a 809 PANTHER PTHR18934:SF118 4 430 1.0E-126 T 20-04-2016 AMC99_RS03250 c0eb804c19ff2fae129755cae9bafc6a 809 Pfam PF00270 DEAD/DEAH box helicase 19 160 7.1E-7 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_RS03250 c0eb804c19ff2fae129755cae9bafc6a 809 SUPERFAMILY SSF52540 14 337 2.56E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03250 c0eb804c19ff2fae129755cae9bafc6a 809 SMART SM00847 388 478 5.7E-8 T 20-04-2016 IPR007502 Helicase-associated domain GO:0004386 AMC99_RS03250 c0eb804c19ff2fae129755cae9bafc6a 809 PANTHER PTHR18934 4 430 1.0E-126 T 20-04-2016 AMC99_RS03250 c0eb804c19ff2fae129755cae9bafc6a 809 Pfam PF04408 Helicase associated domain (HA2) 389 432 1.0E-7 T 20-04-2016 IPR007502 Helicase-associated domain GO:0004386 AMC99_RS03250 c0eb804c19ff2fae129755cae9bafc6a 809 Gene3D G3DSA:3.40.50.300 211 339 3.8E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03250 c0eb804c19ff2fae129755cae9bafc6a 809 Pfam PF08482 ATP-dependent helicase C-terminal 662 791 3.8E-41 T 20-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AMC99_RS03250 c0eb804c19ff2fae129755cae9bafc6a 809 SMART SM00490 227 328 2.3E-14 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS01110 7b1e2030d70f9c815a15a87570f1afca 379 PANTHER PTHR11014 10 379 1.4E-65 T 20-04-2016 AMC99_RS01110 7b1e2030d70f9c815a15a87570f1afca 379 Pfam PF07687 Peptidase dimerisation domain 180 286 8.4E-21 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS01110 7b1e2030d70f9c815a15a87570f1afca 379 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 140 - T 20-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMC99_RS01110 7b1e2030d70f9c815a15a87570f1afca 379 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 372 2.1E-114 T 20-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 AMC99_RS01110 7b1e2030d70f9c815a15a87570f1afca 379 SUPERFAMILY SSF53187 3 183 2.02E-55 T 20-04-2016 AMC99_RS01110 7b1e2030d70f9c815a15a87570f1afca 379 SUPERFAMILY SSF53187 295 373 2.02E-55 T 20-04-2016 AMC99_RS01110 7b1e2030d70f9c815a15a87570f1afca 379 Gene3D G3DSA:3.30.70.360 193 285 2.0E-27 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS01110 7b1e2030d70f9c815a15a87570f1afca 379 SUPERFAMILY SSF55031 184 284 4.64E-24 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS01110 7b1e2030d70f9c815a15a87570f1afca 379 Gene3D G3DSA:3.40.630.10 2 192 8.9E-64 T 20-04-2016 AMC99_RS01110 7b1e2030d70f9c815a15a87570f1afca 379 Gene3D G3DSA:3.40.630.10 319 375 8.9E-64 T 20-04-2016 AMC99_RS01110 7b1e2030d70f9c815a15a87570f1afca 379 Pfam PF01546 Peptidase family M20/M25/M40 73 373 5.0E-39 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMC99_RS01110 7b1e2030d70f9c815a15a87570f1afca 379 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 72 81 - T 20-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMC99_RS01110 7b1e2030d70f9c815a15a87570f1afca 379 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 377 46.241 T 20-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 AMC99_RS03590 6d45bfc74349c52f89190d5795a89bee 333 SUPERFAMILY SSF55120 8 165 2.5E-70 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS03590 6d45bfc74349c52f89190d5795a89bee 333 SUPERFAMILY SSF55120 194 252 2.5E-70 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS03590 6d45bfc74349c52f89190d5795a89bee 333 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 9 249 2.9E-67 T 20-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS03590 6d45bfc74349c52f89190d5795a89bee 333 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 211 266 1.8E-12 T 20-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal AMC99_RS03590 6d45bfc74349c52f89190d5795a89bee 333 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 40 162 9.0E-47 T 20-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AMC99_RS03590 6d45bfc74349c52f89190d5795a89bee 333 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 8 326 17.841 T 20-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS03590 6d45bfc74349c52f89190d5795a89bee 333 PANTHER PTHR13767:SF2 9 168 1.1E-96 T 20-04-2016 AMC99_RS03590 6d45bfc74349c52f89190d5795a89bee 333 PANTHER PTHR13767:SF2 195 326 1.1E-96 T 20-04-2016 AMC99_RS03590 6d45bfc74349c52f89190d5795a89bee 333 PANTHER PTHR13767 9 168 1.1E-96 T 20-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS03590 6d45bfc74349c52f89190d5795a89bee 333 PANTHER PTHR13767 195 326 1.1E-96 T 20-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS13600 10ebabf4d7806d3d03d3f1ca32a299e0 363 PANTHER PTHR30566 103 362 5.3E-55 T 20-04-2016 AMC99_RS13600 10ebabf4d7806d3d03d3f1ca32a299e0 363 Gene3D G3DSA:2.30.30.60 205 254 3.0E-12 T 20-04-2016 AMC99_RS13600 10ebabf4d7806d3d03d3f1ca32a299e0 363 Pfam PF00924 Mechanosensitive ion channel 148 341 1.2E-29 T 20-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMC99_RS13600 10ebabf4d7806d3d03d3f1ca32a299e0 363 PANTHER PTHR30566:SF10 103 362 5.3E-55 T 20-04-2016 AMC99_RS13600 10ebabf4d7806d3d03d3f1ca32a299e0 363 SUPERFAMILY SSF50182 191 255 1.01E-13 T 20-04-2016 IPR010920 LSM domain AMC99_RS11330 2af025c3e56acf8bf2a228d1ae2ba1aa 341 PANTHER PTHR12049:SF7 7 328 1.1E-97 T 20-04-2016 AMC99_RS11330 2af025c3e56acf8bf2a228d1ae2ba1aa 341 PANTHER PTHR12049 7 328 1.1E-97 T 20-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA AMC99_RS11330 2af025c3e56acf8bf2a228d1ae2ba1aa 341 SUPERFAMILY SSF53335 4 341 2.3E-95 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS11330 2af025c3e56acf8bf2a228d1ae2ba1aa 341 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 52 277 5.9E-55 T 20-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA AMC99_RS08220 bfa8ae624d71692f0e8605b9564cc916 256 Gene3D G3DSA:3.30.1330.30 125 171 7.8E-4 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like AMC99_RS08220 bfa8ae624d71692f0e8605b9564cc916 256 Gene3D G3DSA:3.30.1230.10 30 124 8.4E-22 T 20-04-2016 IPR007393 Domain of unknown function DUF448 AMC99_RS08220 bfa8ae624d71692f0e8605b9564cc916 256 SUPERFAMILY SSF55315 123 215 1.03E-7 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like AMC99_RS08220 bfa8ae624d71692f0e8605b9564cc916 256 SUPERFAMILY SSF64376 32 125 6.54E-19 T 20-04-2016 IPR007393 Domain of unknown function DUF448 AMC99_RS08220 bfa8ae624d71692f0e8605b9564cc916 256 PANTHER PTHR34215:SF1 17 235 4.2E-16 T 20-04-2016 AMC99_RS08220 bfa8ae624d71692f0e8605b9564cc916 256 Pfam PF04296 Protein of unknown function (DUF448) 37 116 3.4E-15 T 20-04-2016 IPR007393 Domain of unknown function DUF448 AMC99_RS08220 bfa8ae624d71692f0e8605b9564cc916 256 PANTHER PTHR34215 17 235 4.2E-16 T 20-04-2016 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 431 721 9.6E-79 T 20-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 Pfam PF13185 GAF domain 28 158 2.2E-12 T 20-04-2016 IPR003018 GAF domain GO:0005515 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 Gene3D G3DSA:1.10.274.10 199 309 2.2E-30 T 20-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 Gene3D G3DSA:3.50.30.10 310 432 5.7E-24 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 SUPERFAMILY SSF51621 427 728 7.33E-82 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 Pfam PF05524 PEP-utilising enzyme, N-terminal 184 302 3.2E-22 T 20-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 Gene3D G3DSA:3.20.20.60 433 738 1.3E-78 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 680 692 1.1E-15 T 20-04-2016 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 470 489 1.1E-15 T 20-04-2016 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 644 659 1.1E-15 T 20-04-2016 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 627 642 1.1E-15 T 20-04-2016 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 627 645 - T 20-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 PANTHER PTHR22931 212 730 2.8E-139 T 20-04-2016 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 PANTHER PTHR22931:SF23 212 730 2.8E-139 T 20-04-2016 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 Gene3D G3DSA:3.30.450.40 10 166 3.4E-37 T 20-04-2016 IPR029016 GAF domain-like AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 SUPERFAMILY SSF47831 199 319 1.83E-26 T 20-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 183 736 5.2E-115 T 20-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 SUPERFAMILY SSF52009 301 421 1.07E-22 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 Pfam PF00391 PEP-utilising enzyme, mobile domain 331 400 4.4E-14 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 SMART SM00065 23 168 1.9E-15 T 20-04-2016 IPR003018 GAF domain GO:0005515 AMC99_RS09970 5fdb1baf0e0baa018694854bb76be46a 756 SUPERFAMILY SSF55781 9 166 1.68E-24 T 20-04-2016 IPR029016 GAF domain-like AMC99_RS11430 214f114bf04e2ae7df066e067625380a 608 Gene3D G3DSA:3.20.10.10 495 601 5.7E-22 T 20-04-2016 AMC99_RS11430 214f114bf04e2ae7df066e067625380a 608 SUPERFAMILY SSF56752 340 599 4.45E-35 T 20-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMC99_RS11430 214f114bf04e2ae7df066e067625380a 608 PANTHER PTHR11236:SF18 134 484 5.3E-122 T 20-04-2016 AMC99_RS11430 214f114bf04e2ae7df066e067625380a 608 SUPERFAMILY SSF56322 50 392 1.83E-100 T 20-04-2016 IPR005801 ADC synthase GO:0009058 AMC99_RS11430 214f114bf04e2ae7df066e067625380a 608 PRINTS PR00095 Anthranilate synthase component I signature 326 340 3.7E-12 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMC99_RS11430 214f114bf04e2ae7df066e067625380a 608 PRINTS PR00095 Anthranilate synthase component I signature 341 355 3.7E-12 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMC99_RS11430 214f114bf04e2ae7df066e067625380a 608 PRINTS PR00095 Anthranilate synthase component I signature 246 259 3.7E-12 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMC99_RS11430 214f114bf04e2ae7df066e067625380a 608 PRINTS PR00095 Anthranilate synthase component I signature 232 245 3.7E-12 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMC99_RS11430 214f114bf04e2ae7df066e067625380a 608 Gene3D G3DSA:3.60.120.10 40 392 7.1E-114 T 20-04-2016 IPR005801 ADC synthase GO:0009058 AMC99_RS11430 214f114bf04e2ae7df066e067625380a 608 Pfam PF00425 chorismate binding enzyme 133 389 9.2E-82 T 20-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal AMC99_RS11430 214f114bf04e2ae7df066e067625380a 608 ProSitePatterns PS00770 Aminotransferases class-IV signature. 539 569 - T 20-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 AMC99_RS11430 214f114bf04e2ae7df066e067625380a 608 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 57 389 1.6E-112 T 20-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 AMC99_RS11430 214f114bf04e2ae7df066e067625380a 608 Pfam PF01063 Amino-transferase class IV 407 602 1.1E-26 T 20-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMC99_RS11430 214f114bf04e2ae7df066e067625380a 608 PANTHER PTHR11236 134 484 5.3E-122 T 20-04-2016 AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 5 195 1.1E-38 T 20-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 564 766 2.8E-92 T 20-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 Gene3D G3DSA:3.30.230.10 583 764 1.3E-71 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 PANTHER PTHR10046 1 770 0.0 T 20-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 SMART SM00382 343 495 1.9E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 PANTHER PTHR10046:SF43 1 770 0.0 T 20-04-2016 AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 697 716 3.4E-54 T 20-04-2016 AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 720 738 3.4E-54 T 20-04-2016 AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 351 370 3.4E-54 T 20-04-2016 AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 589 605 3.4E-54 T 20-04-2016 AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 667 686 3.4E-54 T 20-04-2016 AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 PIRSF PIRSF001174 1 769 0.0 T 20-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 SUPERFAMILY SSF52540 310 577 1.78E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 Gene3D G3DSA:1.10.8.60 496 578 2.8E-30 T 20-04-2016 AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 SUPERFAMILY SSF54211 589 764 3.79E-55 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 347 483 6.8E-17 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 TIGRFAM TIGR00763 lon: endopeptidase La 6 765 3.4E-288 T 20-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 Gene3D G3DSA:3.40.50.300 310 495 2.4E-32 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 SUPERFAMILY SSF88697 6 195 5.47E-45 T 20-04-2016 IPR015947 PUA-like domain AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 SMART SM00464 4 196 7.8E-68 T 20-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AMC99_RS03285 f0ed2e78f8ef7a8d670f452f78438e7d 798 Hamap MF_01973 Lon protease [lon]. 5 766 69.013 T 20-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AMC99_RS06500 fcae31c1fc3b4c4bacd539de5b1cddec 320 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 2 187 7.3E-31 T 20-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AMC99_RS00430 d13392a9e68703315b93e001707e4c21 417 Pfam PF02321 Outer membrane efflux protein 52 220 8.9E-17 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMC99_RS00430 d13392a9e68703315b93e001707e4c21 417 Pfam PF02321 Outer membrane efflux protein 246 412 2.2E-19 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMC99_RS00430 d13392a9e68703315b93e001707e4c21 417 Gene3D G3DSA:1.20.1600.10 50 411 9.3E-45 T 20-04-2016 AMC99_RS00430 d13392a9e68703315b93e001707e4c21 417 PANTHER PTHR30203:SF1 50 411 2.4E-37 T 20-04-2016 AMC99_RS00430 d13392a9e68703315b93e001707e4c21 417 PANTHER PTHR30203 50 411 2.4E-37 T 20-04-2016 AMC99_RS00430 d13392a9e68703315b93e001707e4c21 417 SUPERFAMILY SSF56954 8 412 3.4E-60 T 20-04-2016 AMC99_RS12390 733c8bf947d133c3e35e7acdfcd82c9c 282 Pfam PF03618 Kinase/pyrophosphorylase 6 259 2.3E-93 T 20-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AMC99_RS12390 733c8bf947d133c3e35e7acdfcd82c9c 282 Gene3D G3DSA:3.40.50.300 173 267 8.1E-4 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12390 733c8bf947d133c3e35e7acdfcd82c9c 282 PANTHER PTHR31756 1 267 5.0E-104 T 20-04-2016 AMC99_RS12390 733c8bf947d133c3e35e7acdfcd82c9c 282 PANTHER PTHR31756:SF3 1 267 5.0E-104 T 20-04-2016 AMC99_RS12390 733c8bf947d133c3e35e7acdfcd82c9c 282 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 267 57.443 T 20-04-2016 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein AMC99_RS09120 d86e01260c1f00e5eabaf4017251046a 447 Gene3D G3DSA:3.90.190.20 293 427 1.1E-42 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS09120 d86e01260c1f00e5eabaf4017251046a 447 PANTHER PTHR23135:SF2 1 444 1.2E-136 T 20-04-2016 AMC99_RS09120 d86e01260c1f00e5eabaf4017251046a 447 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 112 135 - T 20-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 AMC99_RS09120 d86e01260c1f00e5eabaf4017251046a 447 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 13 428 4.4E-108 T 20-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09120 d86e01260c1f00e5eabaf4017251046a 447 Pfam PF02875 Mur ligase family, glutamate ligase domain 290 338 5.2E-7 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS09120 d86e01260c1f00e5eabaf4017251046a 447 Gene3D G3DSA:3.40.1190.10 251 292 7.1E-8 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09120 d86e01260c1f00e5eabaf4017251046a 447 Gene3D G3DSA:3.40.1190.10 94 236 2.7E-41 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09120 d86e01260c1f00e5eabaf4017251046a 447 SUPERFAMILY SSF53244 288 430 1.5E-42 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS09120 d86e01260c1f00e5eabaf4017251046a 447 SUPERFAMILY SSF53623 68 303 1.98E-47 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09120 d86e01260c1f00e5eabaf4017251046a 447 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 430 31.146 T 20-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09120 d86e01260c1f00e5eabaf4017251046a 447 Gene3D G3DSA:3.40.50.720 7 92 1.7E-12 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09120 d86e01260c1f00e5eabaf4017251046a 447 SUPERFAMILY SSF51984 7 94 6.28E-12 T 20-04-2016 AMC99_RS09120 d86e01260c1f00e5eabaf4017251046a 447 PANTHER PTHR23135 1 444 1.2E-136 T 20-04-2016 AMC99_RS09120 d86e01260c1f00e5eabaf4017251046a 447 Pfam PF08245 Mur ligase middle domain 114 235 4.0E-23 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS13510 801103ce6a09242714b02e9692930429 480 PANTHER PTHR32248:SF4 2 475 2.9E-144 T 20-04-2016 AMC99_RS13510 801103ce6a09242714b02e9692930429 480 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 472 1.8E-126 T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMC99_RS13510 801103ce6a09242714b02e9692930429 480 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 453 460 - T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMC99_RS13510 801103ce6a09242714b02e9692930429 480 PIRSF PIRSF000774 1 475 3.5E-146 T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMC99_RS13510 801103ce6a09242714b02e9692930429 480 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 50 4.3E-17 T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMC99_RS13510 801103ce6a09242714b02e9692930429 480 Pfam PF04552 Sigma-54, DNA binding domain 316 473 5.2E-65 T 20-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding AMC99_RS13510 801103ce6a09242714b02e9692930429 480 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 363 382 - T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMC99_RS13510 801103ce6a09242714b02e9692930429 480 Pfam PF04963 Sigma-54 factor, core binding domain 115 301 7.5E-49 T 20-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 AMC99_RS13510 801103ce6a09242714b02e9692930429 480 PANTHER PTHR32248 2 475 2.9E-144 T 20-04-2016 AMC99_RS13510 801103ce6a09242714b02e9692930429 480 PRINTS PR00045 Sigma-54 factor signature 448 466 1.3E-27 T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMC99_RS13510 801103ce6a09242714b02e9692930429 480 PRINTS PR00045 Sigma-54 factor signature 187 204 1.3E-27 T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMC99_RS13510 801103ce6a09242714b02e9692930429 480 PRINTS PR00045 Sigma-54 factor signature 375 387 1.3E-27 T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMC99_RS13510 801103ce6a09242714b02e9692930429 480 PRINTS PR00045 Sigma-54 factor signature 391 402 1.3E-27 T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMC99_RS09345 97597d710a842fab074f910a941eac0a 339 SUPERFAMILY SSF51445 3 284 1.9E-63 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily AMC99_RS09345 97597d710a842fab074f910a941eac0a 339 Gene3D G3DSA:3.20.20.300 5 284 4.4E-66 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_RS09345 97597d710a842fab074f910a941eac0a 339 PANTHER PTHR30480:SF7 5 280 6.1E-78 T 20-04-2016 AMC99_RS09345 97597d710a842fab074f910a941eac0a 339 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 237 254 - T 20-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AMC99_RS09345 97597d710a842fab074f910a941eac0a 339 PANTHER PTHR30480 5 280 6.1E-78 T 20-04-2016 AMC99_RS09345 97597d710a842fab074f910a941eac0a 339 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 25 298 1.3E-52 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_RS01280 4c503a234ceed792dfaa91e8018d40fa 188 Gene3D G3DSA:3.40.30.10 4 184 1.6E-58 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS01280 4c503a234ceed792dfaa91e8018d40fa 188 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 188 4.7E-98 T 20-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMC99_RS01280 4c503a234ceed792dfaa91e8018d40fa 188 SUPERFAMILY SSF52833 3 187 3.45E-52 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS01280 4c503a234ceed792dfaa91e8018d40fa 188 PIRSF PIRSF000239 1 188 1.8E-53 T 20-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 AMC99_RS01280 4c503a234ceed792dfaa91e8018d40fa 188 PANTHER PTHR10681 1 188 7.1E-82 T 20-04-2016 AMC99_RS01280 4c503a234ceed792dfaa91e8018d40fa 188 PANTHER PTHR10681:SF121 1 188 7.1E-82 T 20-04-2016 AMC99_RS01280 4c503a234ceed792dfaa91e8018d40fa 188 Pfam PF00578 AhpC/TSA family 6 133 2.5E-32 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMC99_RS04550 b707caca1ff9bb1fd699816b868c8e50 492 Pfam PF01435 Peptidase family M48 63 256 5.0E-37 T 20-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMC99_RS04550 b707caca1ff9bb1fd699816b868c8e50 492 Pfam PF01476 LysM domain 442 487 1.6E-5 T 20-04-2016 IPR018392 LysM domain AMC99_RS04550 b707caca1ff9bb1fd699816b868c8e50 492 Gene3D G3DSA:3.10.350.10 441 487 6.8E-7 T 20-04-2016 IPR018392 LysM domain AMC99_RS04550 b707caca1ff9bb1fd699816b868c8e50 492 PANTHER PTHR22726 37 254 7.3E-52 T 20-04-2016 AMC99_RS04550 b707caca1ff9bb1fd699816b868c8e50 492 PANTHER PTHR22726:SF9 37 254 7.3E-52 T 20-04-2016 AMC99_RS04550 b707caca1ff9bb1fd699816b868c8e50 492 Gene3D G3DSA:3.30.2010.10 62 142 3.5E-16 T 20-04-2016 AMC99_RS10760 efe7e48ddf274e34fc95209e03b51223 584 Gene3D G3DSA:3.40.50.980 188 356 4.9E-29 T 20-04-2016 AMC99_RS10760 efe7e48ddf274e34fc95209e03b51223 584 Pfam PF14535 AMP-binding enzyme C-terminal domain 473 564 4.3E-6 T 20-04-2016 IPR028154 AMP-dependent ligase, C-terminal AMC99_RS10760 efe7e48ddf274e34fc95209e03b51223 584 SUPERFAMILY SSF56801 45 573 2.35E-103 T 20-04-2016 AMC99_RS10760 efe7e48ddf274e34fc95209e03b51223 584 Gene3D G3DSA:3.30.300.30 463 570 4.0E-23 T 20-04-2016 AMC99_RS10760 efe7e48ddf274e34fc95209e03b51223 584 Gene3D G3DSA:2.30.38.10 386 462 1.3E-19 T 20-04-2016 AMC99_RS10760 efe7e48ddf274e34fc95209e03b51223 584 Gene3D G3DSA:3.40.50.980 50 187 1.4E-21 T 20-04-2016 AMC99_RS10760 efe7e48ddf274e34fc95209e03b51223 584 PANTHER PTHR22754 41 579 6.1E-89 T 20-04-2016 AMC99_RS10760 efe7e48ddf274e34fc95209e03b51223 584 Pfam PF00501 AMP-binding enzyme 54 471 1.4E-71 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMC99_RS12985 1124530bc09f03003a02b011444a40e1 884 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 33 881 0.0 T 20-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AMC99_RS12985 1124530bc09f03003a02b011444a40e1 884 SUPERFAMILY SSF63737 25 216 2.22E-42 T 20-04-2016 AMC99_RS12985 1124530bc09f03003a02b011444a40e1 884 SUPERFAMILY SSF55486 227 473 1.9E-74 T 20-04-2016 AMC99_RS12985 1124530bc09f03003a02b011444a40e1 884 PANTHER PTHR11533:SF152 29 596 0.0 T 20-04-2016 AMC99_RS12985 1124530bc09f03003a02b011444a40e1 884 PANTHER PTHR11533:SF152 624 883 0.0 T 20-04-2016 AMC99_RS12985 1124530bc09f03003a02b011444a40e1 884 PANTHER PTHR11533 29 596 0.0 T 20-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 AMC99_RS12985 1124530bc09f03003a02b011444a40e1 884 PANTHER PTHR11533 624 883 0.0 T 20-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 AMC99_RS12985 1124530bc09f03003a02b011444a40e1 884 Pfam PF11940 Domain of unknown function (DUF3458) 481 840 1.3E-118 T 20-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AMC99_RS12985 1124530bc09f03003a02b011444a40e1 884 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 336 348 1.5E-7 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_RS12985 1124530bc09f03003a02b011444a40e1 884 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 317 332 1.5E-7 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_RS12985 1124530bc09f03003a02b011444a40e1 884 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 199 214 1.5E-7 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_RS12985 1124530bc09f03003a02b011444a40e1 884 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 281 291 1.5E-7 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_RS12985 1124530bc09f03003a02b011444a40e1 884 Gene3D G3DSA:1.10.390.10 331 474 2.0E-30 T 20-04-2016 AMC99_RS12985 1124530bc09f03003a02b011444a40e1 884 Pfam PF01433 Peptidase family M1 57 407 3.2E-64 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_RS12985 1124530bc09f03003a02b011444a40e1 884 Gene3D G3DSA:1.25.50.10 562 882 4.1E-103 T 20-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AMC99_RS02125 09dad80f76e1c07f6c175b2a82c670a5 127 Gene3D G3DSA:3.30.428.10 6 119 1.0E-31 T 20-04-2016 IPR011146 HIT-like domain GO:0003824 AMC99_RS02125 09dad80f76e1c07f6c175b2a82c670a5 127 ProSitePatterns PS00892 HIT domain signature. 97 115 - T 20-04-2016 IPR019808 Histidine triad, conserved site AMC99_RS02125 09dad80f76e1c07f6c175b2a82c670a5 127 Pfam PF01230 HIT domain 20 117 1.8E-24 T 20-04-2016 IPR001310 Histidine triad (HIT) protein AMC99_RS02125 09dad80f76e1c07f6c175b2a82c670a5 127 SUPERFAMILY SSF54197 9 122 1.55E-30 T 20-04-2016 IPR011146 HIT-like domain GO:0003824 AMC99_RS02125 09dad80f76e1c07f6c175b2a82c670a5 127 PRINTS PR00332 Histidine triad family signature 14 30 7.2E-19 T 20-04-2016 IPR001310 Histidine triad (HIT) protein AMC99_RS02125 09dad80f76e1c07f6c175b2a82c670a5 127 PRINTS PR00332 Histidine triad family signature 104 114 7.2E-19 T 20-04-2016 IPR001310 Histidine triad (HIT) protein AMC99_RS02125 09dad80f76e1c07f6c175b2a82c670a5 127 PRINTS PR00332 Histidine triad family signature 35 53 7.2E-19 T 20-04-2016 IPR001310 Histidine triad (HIT) protein AMC99_RS02125 09dad80f76e1c07f6c175b2a82c670a5 127 PANTHER PTHR23089 9 124 2.0E-35 T 20-04-2016 IPR001310 Histidine triad (HIT) protein AMC99_RS10660 37ea08605b6c1880922726f8eeafcdfa 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.2E-29 T 20-04-2016 IPR020784 Ribosomal protein L11, N-terminal AMC99_RS10660 37ea08605b6c1880922726f8eeafcdfa 143 Gene3D G3DSA:3.30.1550.10 2 72 1.2E-36 T 20-04-2016 IPR020784 Ribosomal protein L11, N-terminal AMC99_RS10660 37ea08605b6c1880922726f8eeafcdfa 143 SMART SM00649 9 141 2.1E-79 T 20-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMC99_RS10660 37ea08605b6c1880922726f8eeafcdfa 143 SUPERFAMILY SSF54747 3 72 2.88E-29 T 20-04-2016 IPR020784 Ribosomal protein L11, N-terminal AMC99_RS10660 37ea08605b6c1880922726f8eeafcdfa 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 29.873 T 20-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMC99_RS10660 37ea08605b6c1880922726f8eeafcdfa 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.8E-21 T 20-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMC99_RS10660 37ea08605b6c1880922726f8eeafcdfa 143 PANTHER PTHR11661 1 143 1.1E-67 T 20-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMC99_RS10660 37ea08605b6c1880922726f8eeafcdfa 143 SUPERFAMILY SSF46906 68 140 1.83E-23 T 20-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMC99_RS10660 37ea08605b6c1880922726f8eeafcdfa 143 Gene3D G3DSA:1.10.10.250 73 141 6.0E-28 T 20-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMC99_RS10660 37ea08605b6c1880922726f8eeafcdfa 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 9.0E-14 T 20-04-2016 AMC99_RS10660 37ea08605b6c1880922726f8eeafcdfa 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 20-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 AMC99_RS10660 37ea08605b6c1880922726f8eeafcdfa 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.8E-62 T 20-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMC99_RS01835 6d433bd3a48a2a4f48d92aa8c3496ece 165 Pfam PF14534 Domain of unknown function (DUF4440) 35 141 2.8E-6 T 20-04-2016 IPR027843 Domain of unknown function DUF4440 AMC99_RS01835 6d433bd3a48a2a4f48d92aa8c3496ece 165 SUPERFAMILY SSF54427 27 141 8.54E-11 T 20-04-2016 IPR032710 NTF2-like domain AMC99_RS01835 6d433bd3a48a2a4f48d92aa8c3496ece 165 Gene3D G3DSA:3.10.450.50 22 148 2.4E-7 T 20-04-2016 IPR032710 NTF2-like domain AMC99_RS12060 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 29 117 2.0E-21 T 20-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 AMC99_RS12060 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 PANTHER PTHR32179 8 283 2.6E-96 T 20-04-2016 AMC99_RS12060 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 Gene3D G3DSA:3.90.1170.20 5 139 2.3E-43 T 20-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 AMC99_RS12060 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 SUPERFAMILY SSF54675 4 118 4.71E-26 T 20-04-2016 AMC99_RS12060 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 SUPERFAMILY SSF51690 119 283 1.92E-53 T 20-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 AMC99_RS12060 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 PIRSF PIRSF006250 6 285 3.7E-82 T 20-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD AMC99_RS12060 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 119 282 1.1E-49 T 20-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 AMC99_RS12060 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 14 283 1.9E-82 T 20-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 AMC99_RS12060 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 Gene3D G3DSA:3.20.20.70 140 273 7.2E-55 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS10690 66d255b1abf773c730f01493065f9db3 479 Gene3D G3DSA:3.40.50.980 4 148 1.6E-24 T 20-04-2016 AMC99_RS10690 66d255b1abf773c730f01493065f9db3 479 Gene3D G3DSA:3.30.300.30 387 477 3.0E-22 T 20-04-2016 AMC99_RS10690 66d255b1abf773c730f01493065f9db3 479 Gene3D G3DSA:2.30.38.10 308 386 1.1E-11 T 20-04-2016 AMC99_RS10690 66d255b1abf773c730f01493065f9db3 479 Gene3D G3DSA:3.40.50.980 149 300 4.9E-30 T 20-04-2016 AMC99_RS10690 66d255b1abf773c730f01493065f9db3 479 SUPERFAMILY SSF56801 4 478 1.09E-95 T 20-04-2016 AMC99_RS10690 66d255b1abf773c730f01493065f9db3 479 Pfam PF00501 AMP-binding enzyme 10 393 2.0E-59 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMC99_RS10690 66d255b1abf773c730f01493065f9db3 479 PANTHER PTHR24095 4 469 3.1E-102 T 20-04-2016 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 Gene3D G3DSA:1.20.210.10 40 523 1.8E-225 T 20-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 29 555 1.2E-212 T 20-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 PANTHER PTHR10422 14 557 0.0 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 PANTHER PTHR10422:SF18 14 557 0.0 T 20-04-2016 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 37 501 2.4E-153 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 338 5.5E-147 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 119 143 5.5E-147 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 91 114 5.5E-147 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 226 245 5.5E-147 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 215 5.5E-147 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 277 298 5.5E-147 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 410 429 5.5E-147 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 347 368 5.5E-147 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 5.5E-147 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 460 481 5.5E-147 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 28 53 5.5E-147 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 382 400 5.5E-147 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 279 333 - T 20-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS02750 c4bbc449016c0ee0e67e8862a9928b8e 569 SUPERFAMILY SSF81442 25 557 1.15E-212 T 20-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS01415 b16f86d3db947a93a56a0390c43f586b 445 SUPERFAMILY SSF53300 236 377 2.97E-8 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS01415 b16f86d3db947a93a56a0390c43f586b 445 PANTHER PTHR33608:SF3 5 444 4.0E-64 T 20-04-2016 AMC99_RS01415 b16f86d3db947a93a56a0390c43f586b 445 PANTHER PTHR33608 5 444 4.0E-64 T 20-04-2016 AMC99_RS01415 b16f86d3db947a93a56a0390c43f586b 445 Pfam PF01882 Protein of unknown function DUF58 199 284 8.6E-22 T 20-04-2016 IPR002881 Domain of unknown function DUF58 AMC99_RS06640 de026ab30d8551ac4ee212255faf4b9d 161 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 4 158 9.1E-23 T 20-04-2016 IPR018681 Protein of unknown function DUF2165, transmembrane AMC99_RS04365 2d7381e8f1a4ea81b76fa04deb8e23d6 92 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 14 67 4.9E-15 T 20-04-2016 AMC99_RS03820 42f26fbbdb10132e54979983936ec5cf 372 Pfam PF00850 Histone deacetylase domain 29 304 3.2E-59 T 20-04-2016 IPR023801 Histone deacetylase domain AMC99_RS03820 42f26fbbdb10132e54979983936ec5cf 372 PANTHER PTHR10625:SF10 18 360 6.0E-81 T 20-04-2016 AMC99_RS03820 42f26fbbdb10132e54979983936ec5cf 372 PRINTS PR01270 Histone deacetylase superfamily signature 130 153 1.8E-18 T 20-04-2016 IPR000286 Histone deacetylase superfamily AMC99_RS03820 42f26fbbdb10132e54979983936ec5cf 372 PRINTS PR01270 Histone deacetylase superfamily signature 163 178 1.8E-18 T 20-04-2016 IPR000286 Histone deacetylase superfamily AMC99_RS03820 42f26fbbdb10132e54979983936ec5cf 372 PRINTS PR01270 Histone deacetylase superfamily signature 242 252 1.8E-18 T 20-04-2016 IPR000286 Histone deacetylase superfamily AMC99_RS03820 42f26fbbdb10132e54979983936ec5cf 372 Gene3D G3DSA:3.40.800.20 14 320 1.7E-74 T 20-04-2016 IPR023801 Histone deacetylase domain AMC99_RS03820 42f26fbbdb10132e54979983936ec5cf 372 SUPERFAMILY SSF52768 8 323 1.39E-86 T 20-04-2016 AMC99_RS03820 42f26fbbdb10132e54979983936ec5cf 372 PANTHER PTHR10625 18 360 6.0E-81 T 20-04-2016 IPR000286 Histone deacetylase superfamily AMC99_RS03900 5acb13edee1a14e1426e9d5c90691110 166 Pfam PF04073 Aminoacyl-tRNA editing domain 24 148 8.4E-27 T 20-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMC99_RS03900 5acb13edee1a14e1426e9d5c90691110 166 SUPERFAMILY SSF55826 4 158 1.96E-41 T 20-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMC99_RS03900 5acb13edee1a14e1426e9d5c90691110 166 PANTHER PTHR31423 1 159 4.5E-36 T 20-04-2016 AMC99_RS03900 5acb13edee1a14e1426e9d5c90691110 166 Gene3D G3DSA:3.90.960.10 4 158 3.4E-50 T 20-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 Pfam PF00403 Heavy-metal-associated domain 20 79 1.4E-12 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 SUPERFAMILY SSF81653 234 327 4.32E-20 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 Gene3D G3DSA:2.70.150.10 187 327 7.4E-20 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 429 435 - T 20-04-2016 IPR018303 P-type ATPase, phosphorylation site AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 SUPERFAMILY SSF55008 18 83 3.93E-17 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 Gene3D G3DSA:3.40.50.1000 400 443 3.5E-35 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 Gene3D G3DSA:3.40.50.1000 523 668 3.5E-35 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 Pfam PF00702 haloacid dehalogenase-like hydrolase 424 613 1.2E-23 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 SUPERFAMILY SSF56784 479 700 1.15E-37 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 SUPERFAMILY SSF56784 427 445 1.15E-37 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 PANTHER PTHR24093 18 702 1.8E-138 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 SUPERFAMILY SSF81665 328 421 2.62E-13 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 SUPERFAMILY SSF81665 174 218 2.62E-13 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 SUPERFAMILY SSF81665 649 680 2.62E-13 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 PANTHER PTHR24093:SF50 18 702 1.8E-138 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 Pfam PF00122 E1-E2 ATPase 197 418 2.1E-52 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 427 441 3.9E-16 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 600 619 3.9E-16 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 277 291 3.9E-16 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 623 635 3.9E-16 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 548 558 3.9E-16 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 165 702 3.5E-134 T 20-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00943 Copper-transporting ATPase signature 60 80 1.1E-12 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00943 Copper-transporting ATPase signature 350 364 1.1E-12 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00943 Copper-transporting ATPase signature 32 46 1.1E-12 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00943 Copper-transporting ATPase signature 410 425 1.1E-12 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00943 Copper-transporting ATPase signature 577 594 1.1E-12 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00943 Copper-transporting ATPase signature 196 215 1.1E-12 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 Gene3D G3DSA:3.30.70.100 18 82 1.6E-18 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 147 702 3.3E-139 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 ProSitePatterns PS01047 Heavy-metal-associated domain. 22 51 - T 20-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 184 703 3.8E-102 T 20-04-2016 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 199 439 7.5E-32 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 AMC99_RS01725 8b2cbd5c0490037c84ca0e8d554597b9 707 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 528 688 2.3E-25 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 AMC99_RS10925 d8f157eb80c57b9caa950eac203867ba 390 Pfam PF01145 SPFH domain / Band 7 family 128 307 4.8E-25 T 20-04-2016 IPR001107 Band 7 domain AMC99_RS10925 d8f157eb80c57b9caa950eac203867ba 390 SMART SM00244 123 291 2.1E-23 T 20-04-2016 IPR001107 Band 7 domain AMC99_RS10925 d8f157eb80c57b9caa950eac203867ba 390 SUPERFAMILY SSF117892 181 297 6.8E-18 T 20-04-2016 IPR001107 Band 7 domain AMC99_RS10925 d8f157eb80c57b9caa950eac203867ba 390 PANTHER PTHR10264:SF51 39 381 1.0E-63 T 20-04-2016 IPR010201 HflK GO:0016021 AMC99_RS10925 d8f157eb80c57b9caa950eac203867ba 390 PANTHER PTHR10264 39 381 1.0E-63 T 20-04-2016 IPR001972 Stomatin family GO:0016020 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 SMART SM00474 340 536 1.5E-33 T 20-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 Pfam PF00476 DNA polymerase family A 569 945 3.1E-138 T 20-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 ProSitePatterns PS00447 DNA polymerase family A signature. 769 788 - T 20-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 SMART SM00482 705 908 1.2E-98 T 20-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 TIGRFAM TIGR00593 pola: DNA polymerase I 7 948 1.1E-260 T 20-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 PANTHER PTHR10133:SF27 3 292 0.0 T 20-04-2016 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 PANTHER PTHR10133:SF27 326 947 0.0 T 20-04-2016 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 SUPERFAMILY SSF53098 338 535 6.42E-47 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 Gene3D G3DSA:3.30.70.370 683 730 1.5E-62 T 20-04-2016 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 Gene3D G3DSA:3.30.70.370 833 948 1.5E-62 T 20-04-2016 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 Gene3D G3DSA:3.40.50.1010 5 196 2.3E-63 T 20-04-2016 IPR029060 PIN domain-like AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 SUPERFAMILY SSF88723 4 180 5.23E-48 T 20-04-2016 IPR029060 PIN domain-like AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 SMART SM00279 183 218 3.1E-11 T 20-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 Gene3D G3DSA:1.10.150.20 731 832 6.8E-29 T 20-04-2016 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 SUPERFAMILY SSF47807 181 296 2.24E-27 T 20-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 Gene3D G3DSA:1.20.1060.10 561 682 1.6E-33 T 20-04-2016 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 1.4E-61 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 769 794 1.4E-61 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 697 712 1.4E-61 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 719 742 1.4E-61 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 828 839 1.4E-61 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 674 696 1.4E-61 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 860 876 1.4E-61 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 891 904 1.4E-61 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 PANTHER PTHR10133 3 292 0.0 T 20-04-2016 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 PANTHER PTHR10133 326 947 0.0 T 20-04-2016 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 SMART SM00475 5 272 3.2E-102 T 20-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 180 3.1E-51 T 20-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 Gene3D G3DSA:1.10.150.20 197 257 2.5E-23 T 20-04-2016 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 181 272 2.2E-26 T 20-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 Pfam PF01612 3'-5' exonuclease 340 535 3.7E-38 T 20-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 Gene3D G3DSA:3.30.420.10 339 560 3.3E-72 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS13610 d0130574fb78d93c9b83b870c6532a89 948 SUPERFAMILY SSF56672 543 948 3.56E-139 T 20-04-2016 AMC99_RS09940 b944abdec6dccfb494cdd3ac1c77c23b 204 Gene3D G3DSA:3.20.20.70 2 202 9.2E-69 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS09940 b944abdec6dccfb494cdd3ac1c77c23b 204 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 123 136 - T 20-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMC99_RS09940 b944abdec6dccfb494cdd3ac1c77c23b 204 Pfam PF01081 KDPG and KHG aldolase 4 191 3.0E-74 T 20-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMC99_RS09940 b944abdec6dccfb494cdd3ac1c77c23b 204 PANTHER PTHR30246 3 202 6.7E-87 T 20-04-2016 AMC99_RS09940 b944abdec6dccfb494cdd3ac1c77c23b 204 PANTHER PTHR30246:SF0 3 202 6.7E-87 T 20-04-2016 AMC99_RS09940 b944abdec6dccfb494cdd3ac1c77c23b 204 SUPERFAMILY SSF51569 3 202 1.39E-62 T 20-04-2016 AMC99_RS09940 b944abdec6dccfb494cdd3ac1c77c23b 204 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 20-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 AMC99_RS09940 b944abdec6dccfb494cdd3ac1c77c23b 204 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 4 201 5.7E-70 T 20-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 PANTHER PTHR10520 3 276 1.3E-134 T 20-04-2016 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 SUPERFAMILY SSF53328 87 283 3.53E-60 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 1.5E-48 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 109 136 1.5E-48 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 1.5E-48 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 1.5E-48 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 87 109 1.5E-48 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 1.5E-48 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 282 46.18 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 Pfam PF01842 ACT domain 7 56 8.7E-9 T 20-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 PIRSF PIRSF036480 2 283 1.7E-104 T 20-04-2016 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 Gene3D G3DSA:3.30.70.260 2 79 3.9E-27 T 20-04-2016 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 SUPERFAMILY SSF55021 1 84 1.08E-19 T 20-04-2016 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 282 1.5E-98 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 Pfam PF00551 Formyl transferase 87 264 7.6E-34 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 PANTHER PTHR10520:SF7 3 276 1.3E-134 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMC99_RS00085 21c612f7f0c88cc8bf37738293180456 284 Gene3D G3DSA:3.40.50.170 86 279 7.0E-53 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_RS12185 cb3a67557e0075cb0c5ba994d4159013 136 SUPERFAMILY SSF46785 2 131 8.88E-31 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS12185 cb3a67557e0075cb0c5ba994d4159013 136 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 127 2.4E-36 T 20-04-2016 IPR014290 SUF system FeS cluster assembly regulator AMC99_RS12185 cb3a67557e0075cb0c5ba994d4159013 136 Pfam PF02082 Transcriptional regulator 1 83 1.6E-22 T 20-04-2016 IPR000944 Transcription regulator Rrf2-type AMC99_RS12185 cb3a67557e0075cb0c5ba994d4159013 136 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.4E-28 T 20-04-2016 IPR000944 Transcription regulator Rrf2-type AMC99_RS12185 cb3a67557e0075cb0c5ba994d4159013 136 Gene3D G3DSA:1.10.10.10 1 132 6.6E-32 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS12185 cb3a67557e0075cb0c5ba994d4159013 136 PANTHER PTHR33221:SF2 2 132 1.1E-35 T 20-04-2016 AMC99_RS12185 cb3a67557e0075cb0c5ba994d4159013 136 PANTHER PTHR33221 2 132 1.1E-35 T 20-04-2016 AMC99_RS02975 f606658f38bdbe284476b65a56b0bd57 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMC99_RS02975 f606658f38bdbe284476b65a56b0bd57 402 Gene3D G3DSA:3.40.640.10 8 259 3.0E-95 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS02975 f606658f38bdbe284476b65a56b0bd57 402 PANTHER PTHR11808 2 398 3.3E-184 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMC99_RS02975 f606658f38bdbe284476b65a56b0bd57 402 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 8 394 2.5E-188 T 20-04-2016 IPR006237 L-methionine gamma-lyase GO:0018826 AMC99_RS02975 f606658f38bdbe284476b65a56b0bd57 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 393 1.4E-142 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMC99_RS02975 f606658f38bdbe284476b65a56b0bd57 402 PANTHER PTHR11808:SF14 2 398 3.3E-184 T 20-04-2016 AMC99_RS02975 f606658f38bdbe284476b65a56b0bd57 402 PIRSF PIRSF001434 1 397 2.7E-146 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMC99_RS02975 f606658f38bdbe284476b65a56b0bd57 402 SUPERFAMILY SSF53383 28 394 2.45E-123 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS02975 f606658f38bdbe284476b65a56b0bd57 402 Gene3D G3DSA:3.90.1150.10 260 395 3.1E-52 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS12235 68abadfcf06d6ee4120c1447c4116805 351 PANTHER PTHR23289 17 342 8.4E-88 T 20-04-2016 AMC99_RS12235 68abadfcf06d6ee4120c1447c4116805 351 Pfam PF02628 Cytochrome oxidase assembly protein 20 335 8.0E-100 T 20-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 AMC99_RS12235 68abadfcf06d6ee4120c1447c4116805 351 Hamap MF_01665 Heme A synthase [ctaA]. 15 346 24.195 T 20-04-2016 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 UniPathway: UPA00269 AMC99_RS07960 8df64486c09ab730d91a87e4a250cce9 253 Pfam PF13462 Thioredoxin 59 240 5.3E-23 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS07960 8df64486c09ab730d91a87e4a250cce9 253 SUPERFAMILY SSF52833 52 232 1.53E-24 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS07960 8df64486c09ab730d91a87e4a250cce9 253 Gene3D G3DSA:3.40.30.10 175 231 2.9E-4 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS07960 8df64486c09ab730d91a87e4a250cce9 253 Gene3D G3DSA:3.40.30.10 50 147 2.7E-19 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS03005 3d6fe5f4834c1c5f3c02e11c44a7d143 474 SUPERFAMILY SSF56935 86 331 6.96E-6 T 20-04-2016 AMC99_RS04195 49cbc0b678fce8a770f01b187e81140e 757 Pfam PF04453 Organic solvent tolerance protein 318 683 4.9E-60 T 20-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AMC99_RS04195 49cbc0b678fce8a770f01b187e81140e 757 Pfam PF03968 OstA-like protein 64 208 2.6E-5 T 20-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal AMC99_RS04195 49cbc0b678fce8a770f01b187e81140e 757 PANTHER PTHR30189 60 711 8.8E-24 T 20-04-2016 AMC99_RS04195 49cbc0b678fce8a770f01b187e81140e 757 Gene3D G3DSA:2.60.450.10 55 138 2.5E-22 T 20-04-2016 AMC99_RS04195 49cbc0b678fce8a770f01b187e81140e 757 Gene3D G3DSA:2.60.450.10 176 209 2.5E-22 T 20-04-2016 AMC99_RS04195 49cbc0b678fce8a770f01b187e81140e 757 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 21 756 15.311 T 20-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AMC99_RS03030 4e4e52c3dfddc5cd7ac30409ea8493fc 88 SUPERFAMILY SSF50249 1 70 1.09E-21 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS03030 4e4e52c3dfddc5cd7ac30409ea8493fc 88 PANTHER PTHR33370 2 83 3.1E-33 T 20-04-2016 AMC99_RS03030 4e4e52c3dfddc5cd7ac30409ea8493fc 88 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 23.23 T 20-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMC99_RS03030 4e4e52c3dfddc5cd7ac30409ea8493fc 88 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 5.5E-26 T 20-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMC99_RS03030 4e4e52c3dfddc5cd7ac30409ea8493fc 88 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 1.1E-18 T 20-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AMC99_RS03030 4e4e52c3dfddc5cd7ac30409ea8493fc 88 Gene3D G3DSA:2.40.50.140 2 71 2.1E-29 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS03205 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 PANTHER PTHR19211 28 538 6.4E-159 T 20-04-2016 AMC99_RS03205 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 PANTHER PTHR19211:SF45 28 538 6.4E-159 T 20-04-2016 AMC99_RS03205 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 Gene3D G3DSA:3.40.50.300 291 514 9.6E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03205 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 Gene3D G3DSA:3.40.50.300 28 248 3.4E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03205 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 SUPERFAMILY SSF52540 25 199 8.0E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03205 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_RS03205 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 SUPERFAMILY SSF52540 284 481 6.83E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03205 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 SMART SM00382 36 198 7.2E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS03205 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 SMART SM00382 313 483 2.8E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS03205 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 Pfam PF00005 ABC transporter 305 438 8.4E-25 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS03205 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 Pfam PF00005 ABC transporter 28 153 1.2E-18 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS03205 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 Pfam PF16326 ABC transporter C-terminal domain 528 597 2.8E-19 T 20-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AMC99_RS13540 13ef104d4ea612e448231142489795ec 412 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 401 1.7E-130 T 20-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 AMC99_RS13540 13ef104d4ea612e448231142489795ec 412 PANTHER PTHR11476:SF9 7 384 4.9E-156 T 20-04-2016 AMC99_RS13540 13ef104d4ea612e448231142489795ec 412 Gene3D G3DSA:3.30.930.10 5 185 9.3E-83 T 20-04-2016 AMC99_RS13540 13ef104d4ea612e448231142489795ec 412 Gene3D G3DSA:3.30.930.10 221 327 9.3E-83 T 20-04-2016 AMC99_RS13540 13ef104d4ea612e448231142489795ec 412 PIRSF PIRSF001549 2 410 1.8E-94 T 20-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AMC99_RS13540 13ef104d4ea612e448231142489795ec 412 Pfam PF13393 Histidyl-tRNA synthetase 11 319 2.5E-30 T 20-04-2016 AMC99_RS13540 13ef104d4ea612e448231142489795ec 412 Gene3D G3DSA:3.40.50.800 330 387 3.0E-4 T 20-04-2016 IPR004154 Anticodon-binding AMC99_RS13540 13ef104d4ea612e448231142489795ec 412 PANTHER PTHR11476 7 384 4.9E-156 T 20-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AMC99_RS13540 13ef104d4ea612e448231142489795ec 412 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 4 409 26.428 T 20-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 AMC99_RS13540 13ef104d4ea612e448231142489795ec 412 SUPERFAMILY SSF55681 7 325 7.28E-89 T 20-04-2016 AMC99_RS07660 3101d2c4052d2e0942d04b02bc589248 463 SUPERFAMILY SSF52540 90 423 1.94E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07660 3101d2c4052d2e0942d04b02bc589248 463 Pfam PF00437 Type II/IV secretion system protein 110 386 4.1E-83 T 20-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AMC99_RS07660 3101d2c4052d2e0942d04b02bc589248 463 PANTHER PTHR30258:SF3 35 449 2.3E-134 T 20-04-2016 AMC99_RS07660 3101d2c4052d2e0942d04b02bc589248 463 SMART SM00382 234 364 8.4E-4 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS07660 3101d2c4052d2e0942d04b02bc589248 463 Gene3D G3DSA:3.40.50.300 208 426 1.1E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07660 3101d2c4052d2e0942d04b02bc589248 463 Gene3D G3DSA:3.30.450.90 107 204 2.7E-35 T 20-04-2016 AMC99_RS07660 3101d2c4052d2e0942d04b02bc589248 463 PANTHER PTHR30258 35 449 2.3E-134 T 20-04-2016 AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 268 431 1.6E-53 T 20-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 Gene3D G3DSA:3.40.50.920 521 598 2.0E-11 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 29 218 7.6E-34 T 20-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 21 620 4.0E-198 T 20-04-2016 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969|UniPathway: UPA00223 AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 SUPERFAMILY SSF52922 521 623 9.89E-16 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 SUPERFAMILY SSF52518 245 506 4.81E-62 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 Gene3D G3DSA:3.40.920.10 21 220 1.7E-23 T 20-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 PANTHER PTHR32154 264 430 2.3E-202 T 20-04-2016 AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 PANTHER PTHR32154 461 625 2.3E-202 T 20-04-2016 AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 PANTHER PTHR32154 19 237 2.3E-202 T 20-04-2016 AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 Gene3D G3DSA:3.40.50.970 239 433 7.9E-72 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 525 586 1.5E-7 T 20-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 SUPERFAMILY SSF53323 23 224 4.05E-18 T 20-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 PANTHER PTHR32154:SF14 264 430 2.3E-202 T 20-04-2016 AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 PANTHER PTHR32154:SF14 461 625 2.3E-202 T 20-04-2016 AMC99_RS06515 2e6a925572b72c340cb16f6806dab069 625 PANTHER PTHR32154:SF14 19 237 2.3E-202 T 20-04-2016 AMC99_RS01500 a062f444318f22f0625efb9463d2a555 390 PANTHER PTHR21716:SF16 3 357 5.6E-51 T 20-04-2016 AMC99_RS01500 a062f444318f22f0625efb9463d2a555 390 PANTHER PTHR21716 3 357 5.6E-51 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like AMC99_RS01500 a062f444318f22f0625efb9463d2a555 390 Pfam PF01594 Domain of unknown function DUF20 31 356 9.6E-34 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 Pfam PF00384 Molybdopterin oxidoreductase 277 421 1.8E-23 T 20-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 Pfam PF00384 Molybdopterin oxidoreductase 448 583 3.5E-26 T 20-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 99 111 - T 20-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 SUPERFAMILY SSF54862 76 212 2.8E-35 T 20-04-2016 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 SMART SM00929 84 124 2.8E-20 T 20-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 20-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 121 2.9E-16 T 20-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 PANTHER PTHR11615 343 658 6.2E-258 T 20-04-2016 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 PANTHER PTHR11615 3 318 6.2E-258 T 20-04-2016 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 PANTHER PTHR11615:SF115 343 658 6.2E-258 T 20-04-2016 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 PANTHER PTHR11615:SF115 3 318 6.2E-258 T 20-04-2016 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 622 656 9.3E-10 T 20-04-2016 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 581 6.5E-205 T 20-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 20-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 SUPERFAMILY SSF54292 1 75 2.57E-19 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 77 3.5E-16 T 20-04-2016 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 SUPERFAMILY SSF53706 214 608 3.35E-84 T 20-04-2016 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 Gene3D G3DSA:3.40.50.740 479 608 8.1E-41 T 20-04-2016 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 Gene3D G3DSA:3.40.50.740 272 405 8.1E-41 T 20-04-2016 AMC99_RS06100 83b994b3326514a1ebf14e56e309f195 671 Gene3D G3DSA:3.10.20.30 5 66 3.4E-7 T 20-04-2016 IPR012675 Beta-grasp domain AMC99_RS02680 df13af6e1db401164d10464a1f5577e4 327 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 14 44 1.8E-14 T 20-04-2016 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMC99_RS02680 df13af6e1db401164d10464a1f5577e4 327 Gene3D G3DSA:3.40.50.300 61 233 9.4E-22 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02680 df13af6e1db401164d10464a1f5577e4 327 SUPERFAMILY SSF52540 39 284 4.24E-28 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02680 df13af6e1db401164d10464a1f5577e4 327 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 229 280 6.3E-5 T 20-04-2016 IPR013615 CbbQ/NirQ/NorQ, C-terminal AMC99_RS02680 df13af6e1db401164d10464a1f5577e4 327 Pfam PF07728 AAA domain (dynein-related subfamily) 71 195 1.8E-10 T 20-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 Gene3D G3DSA:3.30.450.20 228 344 1.2E-19 T 20-04-2016 AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 229 351 8.2E-20 T 20-04-2016 IPR000014 PAS domain AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 575 4.7E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 556 4.7E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 517 4.7E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 531 4.7E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 SUPERFAMILY SSF47384 339 422 4.71E-20 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 Pfam PF00072 Response regulator receiver domain 594 674 1.2E-9 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 SMART SM00387 466 578 9.1E-35 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 SMART SM00091 228 295 1.8E-7 T 20-04-2016 IPR000014 PAS domain AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 Gene3D G3DSA:3.30.565.10 407 580 3.6E-43 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 SUPERFAMILY SSF52172 594 702 8.68E-13 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 Gene3D G3DSA:3.40.50.2300 594 706 2.9E-15 T 20-04-2016 AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 SMART SM00388 352 420 4.4E-19 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 Gene3D G3DSA:1.10.287.130 345 406 1.2E-18 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 Pfam PF00512 His Kinase A (phospho-acceptor) domain 352 420 1.5E-16 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 466 577 1.2E-22 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 SUPERFAMILY SSF55874 409 581 2.36E-44 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 SMART SM00086 304 346 0.0051 T 20-04-2016 IPR001610 PAC motif AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 SUPERFAMILY SSF55785 239 351 2.62E-19 T 20-04-2016 IPR000014 PAS domain AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 Pfam PF05227 CHASE3 domain 47 177 4.5E-25 T 20-04-2016 IPR007891 CHASE3 AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 Pfam PF13426 PAS domain 239 344 2.3E-11 T 20-04-2016 IPR000014 PAS domain AMC99_RS10265 fe90deebb5a2b969be2aca64f0209c62 710 PANTHER PTHR24423 212 674 8.1E-103 T 20-04-2016 AMC99_RS03720 1031667d32d2d7d4e828c5bae13affb5 220 PIRSF PIRSF000239 10 215 1.3E-67 T 20-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 AMC99_RS03720 1031667d32d2d7d4e828c5bae13affb5 220 SUPERFAMILY SSF52833 13 204 2.29E-57 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS03720 1031667d32d2d7d4e828c5bae13affb5 220 PANTHER PTHR10681 5 186 2.0E-53 T 20-04-2016 AMC99_RS03720 1031667d32d2d7d4e828c5bae13affb5 220 Gene3D G3DSA:3.40.30.10 15 201 4.6E-59 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS03720 1031667d32d2d7d4e828c5bae13affb5 220 Pfam PF00578 AhpC/TSA family 16 145 9.7E-31 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMC99_RS05560 de258d0765b482179185300a7a920b9d 203 PANTHER PTHR30353 1 197 9.7E-44 T 20-04-2016 IPR032818 DedA family AMC99_RS05560 de258d0765b482179185300a7a920b9d 203 Pfam PF09335 SNARE associated Golgi protein 30 159 1.4E-22 T 20-04-2016 IPR032816 SNARE associated Golgi protein AMC99_RS05560 de258d0765b482179185300a7a920b9d 203 PANTHER PTHR30353:SF13 1 197 9.7E-44 T 20-04-2016 AMC99_RS12590 d553a13bb200e4936ecb426ef812872a 328 PANTHER PTHR11695 15 325 1.7E-132 T 20-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMC99_RS12590 d553a13bb200e4936ecb426ef812872a 328 SMART SM00829 10 323 1.1E-58 T 20-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_RS12590 d553a13bb200e4936ecb426ef812872a 328 SUPERFAMILY SSF51735 111 288 1.44E-52 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12590 d553a13bb200e4936ecb426ef812872a 328 Pfam PF00107 Zinc-binding dehydrogenase 151 275 1.6E-33 T 20-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_RS12590 d553a13bb200e4936ecb426ef812872a 328 SUPERFAMILY SSF50129 1 134 4.87E-38 T 20-04-2016 IPR011032 GroES-like AMC99_RS12590 d553a13bb200e4936ecb426ef812872a 328 Gene3D G3DSA:3.40.50.720 146 262 1.7E-32 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12590 d553a13bb200e4936ecb426ef812872a 328 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 325 3.3E-140 T 20-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- AMC99_RS12590 d553a13bb200e4936ecb426ef812872a 328 Gene3D G3DSA:3.90.180.10 1 145 2.1E-44 T 20-04-2016 IPR011032 GroES-like AMC99_RS12590 d553a13bb200e4936ecb426ef812872a 328 PANTHER PTHR11695:SF610 15 325 1.7E-132 T 20-04-2016 AMC99_RS12590 d553a13bb200e4936ecb426ef812872a 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 87 3.8E-7 T 20-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_RS02655 aec12165b819f7780db0cefdb4e8c885 209 Gene3D G3DSA:3.40.30.10 5 90 3.6E-24 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS02655 aec12165b819f7780db0cefdb4e8c885 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 77 8.1E-11 T 20-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_RS02655 aec12165b819f7780db0cefdb4e8c885 209 PANTHER PTHR11260 1 196 3.0E-28 T 20-04-2016 AMC99_RS02655 aec12165b819f7780db0cefdb4e8c885 209 SUPERFAMILY SSF52833 2 87 8.24E-20 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS02655 aec12165b819f7780db0cefdb4e8c885 209 Gene3D G3DSA:1.20.1050.10 91 190 1.3E-15 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS02655 aec12165b819f7780db0cefdb4e8c885 209 SUPERFAMILY SSF47616 89 198 3.34E-18 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS02655 aec12165b819f7780db0cefdb4e8c885 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 116 172 5.8E-6 T 20-04-2016 IPR004046 Glutathione S-transferase, C-terminal AMC99_RS02195 16a9bb4d978a9aa569624604facf3998 230 Pfam PF00149 Calcineurin-like phosphoesterase 25 118 4.5E-5 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMC99_RS02195 16a9bb4d978a9aa569624604facf3998 230 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 5 201 9.9E-62 T 20-04-2016 IPR026336 Metallophosphoesterase, DNA ligase-associated AMC99_RS02195 16a9bb4d978a9aa569624604facf3998 230 PIRSF PIRSF000887 4 227 8.1E-45 T 20-04-2016 IPR024173 Phosphoesterase, MJ0037 AMC99_RS02195 16a9bb4d978a9aa569624604facf3998 230 Gene3D G3DSA:3.60.21.10 26 118 6.3E-10 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like AMC99_RS02195 16a9bb4d978a9aa569624604facf3998 230 SUPERFAMILY SSF56300 25 179 3.23E-15 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like AMC99_RS02195 16a9bb4d978a9aa569624604facf3998 230 PANTHER PTHR39323 3 229 2.5E-31 T 20-04-2016 AMC99_RS02195 16a9bb4d978a9aa569624604facf3998 230 PANTHER PTHR39323:SF1 3 229 2.5E-31 T 20-04-2016 AMC99_RS04610 99c46062b4995b65933330104c104d4e 147 SUPERFAMILY SSF52540 21 133 9.94E-17 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04610 99c46062b4995b65933330104c104d4e 147 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 5 136 4.7E-30 T 20-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMC99_RS04610 99c46062b4995b65933330104c104d4e 147 PANTHER PTHR33540 1 111 1.9E-31 T 20-04-2016 AMC99_RS04610 99c46062b4995b65933330104c104d4e 147 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 128 5.2E-32 T 20-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMC99_RS04610 99c46062b4995b65933330104c104d4e 147 Gene3D G3DSA:3.40.50.300 4 140 4.8E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS01780 98317ee630e4b335b18381f0642cb4a1 402 SUPERFAMILY SSF47203 234 397 3.06E-11 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS01780 98317ee630e4b335b18381f0642cb4a1 402 SUPERFAMILY SSF56645 2 247 1.44E-65 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS01780 98317ee630e4b335b18381f0642cb4a1 402 PANTHER PTHR10909 369 398 3.8E-113 T 20-04-2016 AMC99_RS01780 98317ee630e4b335b18381f0642cb4a1 402 PANTHER PTHR10909 1 350 3.8E-113 T 20-04-2016 AMC99_RS01780 98317ee630e4b335b18381f0642cb4a1 402 Gene3D G3DSA:1.20.140.10 225 398 7.5E-19 T 20-04-2016 AMC99_RS01780 98317ee630e4b335b18381f0642cb4a1 402 Gene3D G3DSA:2.40.110.10 126 224 5.1E-30 T 20-04-2016 AMC99_RS01780 98317ee630e4b335b18381f0642cb4a1 402 Gene3D G3DSA:1.10.540.10 1 123 1.3E-21 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS01780 98317ee630e4b335b18381f0642cb4a1 402 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 123 9.7E-17 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS01780 98317ee630e4b335b18381f0642cb4a1 402 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 397 7.0E-13 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS01780 98317ee630e4b335b18381f0642cb4a1 402 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 222 3.3E-18 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS01780 98317ee630e4b335b18381f0642cb4a1 402 PANTHER PTHR10909:SF229 369 398 3.8E-113 T 20-04-2016 AMC99_RS01780 98317ee630e4b335b18381f0642cb4a1 402 PANTHER PTHR10909:SF229 1 350 3.8E-113 T 20-04-2016 AMC99_RS00470 896f62a2d1256d9cab636198f220d416 186 Pfam PF04542 Sigma-70 region 2 27 92 5.4E-14 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS00470 896f62a2d1256d9cab636198f220d416 186 PANTHER PTHR30173 1 184 2.9E-39 T 20-04-2016 AMC99_RS00470 896f62a2d1256d9cab636198f220d416 186 SUPERFAMILY SSF88659 121 183 2.62E-15 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS00470 896f62a2d1256d9cab636198f220d416 186 Gene3D G3DSA:1.10.1740.10 5 118 6.6E-23 T 20-04-2016 AMC99_RS00470 896f62a2d1256d9cab636198f220d416 186 Pfam PF08281 Sigma-70, region 4 130 179 7.8E-14 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS00470 896f62a2d1256d9cab636198f220d416 186 Gene3D G3DSA:1.10.10.10 120 183 3.0E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS00470 896f62a2d1256d9cab636198f220d416 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 182 4.0E-23 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS00470 896f62a2d1256d9cab636198f220d416 186 SUPERFAMILY SSF88946 5 111 1.29E-22 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS03545 aca1edda4457e6b7f67cca8021c28674 173 Gene3D G3DSA:3.90.1140.10 9 169 8.8E-5 T 20-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AMC99_RS03545 aca1edda4457e6b7f67cca8021c28674 173 SUPERFAMILY SSF55144 11 169 3.66E-7 T 20-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AMC99_RS03545 aca1edda4457e6b7f67cca8021c28674 173 Pfam PF13563 2'-5' RNA ligase superfamily 13 155 2.0E-14 T 20-04-2016 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 SUPERFAMILY SSF81271 6 64 1.11E-15 T 20-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 PANTHER PTHR11451 1 329 0.0 T 20-04-2016 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 PANTHER PTHR11451 347 662 0.0 T 20-04-2016 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 SUPERFAMILY SSF55186 67 250 1.31E-49 T 20-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 PRINTS PR01047 Threonyl-tRNA synthetase signature 538 551 6.3E-49 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 PRINTS PR01047 Threonyl-tRNA synthetase signature 495 523 6.3E-49 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 PRINTS PR01047 Threonyl-tRNA synthetase signature 565 577 6.3E-49 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 PRINTS PR01047 Threonyl-tRNA synthetase signature 389 412 6.3E-49 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 PRINTS PR01047 Threonyl-tRNA synthetase signature 356 384 6.3E-49 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 70 665 31.465 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 SUPERFAMILY SSF52954 561 662 9.67E-31 T 20-04-2016 IPR004154 Anticodon-binding AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 SMART SM00863 176 228 1.0E-20 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 Pfam PF02824 TGS domain 6 64 1.0E-12 T 20-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 Gene3D G3DSA:3.30.54.20 138 194 3.6E-15 T 20-04-2016 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 SUPERFAMILY SSF55681 252 557 4.79E-91 T 20-04-2016 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 353 559 8.4E-41 T 20-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 Gene3D G3DSA:3.40.50.800 562 661 9.1E-33 T 20-04-2016 IPR004154 Anticodon-binding AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 Pfam PF03129 Anticodon binding domain 572 660 2.7E-22 T 20-04-2016 IPR004154 Anticodon-binding AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 Gene3D G3DSA:3.10.20.30 6 67 8.7E-23 T 20-04-2016 IPR012675 Beta-grasp domain AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 176 228 2.0E-12 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 PANTHER PTHR11451:SF31 1 329 0.0 T 20-04-2016 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 PANTHER PTHR11451:SF31 347 662 0.0 T 20-04-2016 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 Gene3D G3DSA:3.30.980.10 70 136 1.3E-32 T 20-04-2016 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 Gene3D G3DSA:3.30.980.10 195 232 1.3E-32 T 20-04-2016 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 76 660 3.1E-192 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMC99_RS11745 7b874283d728c074c757ac817c011e1d 671 Gene3D G3DSA:3.30.930.10 251 561 3.8E-111 T 20-04-2016 AMC99_RS09590 a655bd1af46738be8ddf89e51b0fe52e 199 SUPERFAMILY SSF50475 11 177 6.98E-25 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMC99_RS09590 a655bd1af46738be8ddf89e51b0fe52e 199 Pfam PF04299 Putative FMN-binding domain 1 158 1.7E-36 T 20-04-2016 IPR007396 Transcriptional regulator PAI 2-type AMC99_RS09590 a655bd1af46738be8ddf89e51b0fe52e 199 PIRSF PIRSF010372 1 199 7.5E-39 T 20-04-2016 IPR007396 Transcriptional regulator PAI 2-type AMC99_RS09590 a655bd1af46738be8ddf89e51b0fe52e 199 Gene3D G3DSA:2.30.110.10 1 196 5.1E-49 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMC99_RS09590 a655bd1af46738be8ddf89e51b0fe52e 199 PANTHER PTHR35802 2 195 5.8E-33 T 20-04-2016 AMC99_RS09590 a655bd1af46738be8ddf89e51b0fe52e 199 PANTHER PTHR35802:SF1 2 195 5.8E-33 T 20-04-2016 AMC99_RS05080 c4c93351ef30394c87981257a6d1ffb7 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 314 24.398 T 20-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 AMC99_RS05080 c4c93351ef30394c87981257a6d1ffb7 315 Pfam PF01715 IPP transferase 50 291 8.0E-62 T 20-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 AMC99_RS05080 c4c93351ef30394c87981257a6d1ffb7 315 Gene3D G3DSA:3.40.50.300 9 179 2.0E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05080 c4c93351ef30394c87981257a6d1ffb7 315 Gene3D G3DSA:1.10.287.890 209 290 9.8E-32 T 20-04-2016 AMC99_RS05080 c4c93351ef30394c87981257a6d1ffb7 315 SUPERFAMILY SSF52540 13 153 2.66E-17 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05080 c4c93351ef30394c87981257a6d1ffb7 315 PANTHER PTHR11088 1 308 2.8E-79 T 20-04-2016 AMC99_RS05080 c4c93351ef30394c87981257a6d1ffb7 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 13 291 5.4E-66 T 20-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 AMC99_RS05080 c4c93351ef30394c87981257a6d1ffb7 315 SUPERFAMILY SSF52540 12 78 1.49E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05080 c4c93351ef30394c87981257a6d1ffb7 315 SUPERFAMILY SSF52540 157 220 1.49E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07835 9888b669d2e9b4f50856bd840d36975b 202 SUPERFAMILY SSF55469 17 193 3.8E-44 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 AMC99_RS07835 9888b669d2e9b4f50856bd840d36975b 202 PANTHER PTHR23026 10 196 7.0E-75 T 20-04-2016 AMC99_RS07835 9888b669d2e9b4f50856bd840d36975b 202 Gene3D G3DSA:3.40.109.10 9 198 6.8E-42 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 AMC99_RS07835 9888b669d2e9b4f50856bd840d36975b 202 Pfam PF00881 Nitroreductase family 21 180 4.2E-15 T 20-04-2016 IPR029479 Nitroreductase AMC99_RS07835 9888b669d2e9b4f50856bd840d36975b 202 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 3 202 41.54 T 20-04-2016 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 AMC99_RS07835 9888b669d2e9b4f50856bd840d36975b 202 PANTHER PTHR23026:SF110 10 196 7.0E-75 T 20-04-2016 AMC99_RS11810 53e470f5f9f15a43d35c50425b598fcc 331 PANTHER PTHR24220:SF160 25 242 4.1E-79 T 20-04-2016 AMC99_RS11810 53e470f5f9f15a43d35c50425b598fcc 331 SMART SM00382 48 230 1.8E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS11810 53e470f5f9f15a43d35c50425b598fcc 331 PANTHER PTHR24220 25 242 4.1E-79 T 20-04-2016 AMC99_RS11810 53e470f5f9f15a43d35c50425b598fcc 331 Pfam PF00005 ABC transporter 40 179 6.8E-22 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS11810 53e470f5f9f15a43d35c50425b598fcc 331 SUPERFAMILY SSF52540 23 240 7.99E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11810 53e470f5f9f15a43d35c50425b598fcc 331 Gene3D G3DSA:3.40.50.300 22 240 5.5E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03625 d3d128c32401f319300450b0f5fee154 288 PANTHER PTHR30413:SF2 30 288 9.8E-46 T 20-04-2016 AMC99_RS03625 d3d128c32401f319300450b0f5fee154 288 PANTHER PTHR30413 30 288 9.8E-46 T 20-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMC99_RS03625 d3d128c32401f319300450b0f5fee154 288 PIRSF PIRSF006648 27 283 4.1E-18 T 20-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMC99_RS03625 d3d128c32401f319300450b0f5fee154 288 PRINTS PR00164 ABC-2 type transport system membrane protein signature 204 223 3.2E-7 T 20-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMC99_RS03625 d3d128c32401f319300450b0f5fee154 288 PRINTS PR00164 ABC-2 type transport system membrane protein signature 84 106 3.2E-7 T 20-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMC99_RS03625 d3d128c32401f319300450b0f5fee154 288 PRINTS PR00164 ABC-2 type transport system membrane protein signature 224 243 3.2E-7 T 20-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMC99_RS03625 d3d128c32401f319300450b0f5fee154 288 PRINTS PR00164 ABC-2 type transport system membrane protein signature 128 153 3.2E-7 T 20-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMC99_RS03625 d3d128c32401f319300450b0f5fee154 288 Pfam PF01061 ABC-2 type transporter 35 246 6.3E-25 T 20-04-2016 IPR013525 ABC-2 type transporter GO:0016020 AMC99_RS00850 5d58fba143bdc74ee3e8d2c1f620a74a 331 Pfam PF01757 Acyltransferase family 7 309 1.5E-23 T 20-04-2016 IPR002656 Acyltransferase 3 GO:0016747 AMC99_RS00850 5d58fba143bdc74ee3e8d2c1f620a74a 331 PANTHER PTHR23028:SF53 4 330 2.2E-52 T 20-04-2016 AMC99_RS00850 5d58fba143bdc74ee3e8d2c1f620a74a 331 PANTHER PTHR23028 4 330 2.2E-52 T 20-04-2016 AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 TIGRFAM TIGR00038 efp: translation elongation factor P 4 186 2.4E-71 T 20-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 Hamap MF_00141 Elongation factor P [efp]. 2 186 43.695 T 20-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 Gene3D G3DSA:2.40.50.140 130 186 8.2E-20 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 Gene3D G3DSA:2.30.30.30 3 64 2.3E-23 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 SMART SM00841 130 185 6.2E-24 T 20-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 SUPERFAMILY SSF50249 66 130 4.16E-20 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 PANTHER PTHR30053:SF1 1 187 2.7E-84 T 20-04-2016 AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 Gene3D G3DSA:2.40.50.140 66 128 4.9E-27 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 Pfam PF09285 Elongation factor P, C-terminal 130 184 4.8E-19 T 20-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 PIRSF PIRSF005901 1 187 8.0E-67 T 20-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 20-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 SUPERFAMILY SSF50249 130 186 2.23E-14 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 8.7E-22 T 20-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 2.6E-24 T 20-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 SMART SM01185 68 122 4.3E-28 T 20-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 SUPERFAMILY SSF50104 5 64 2.53E-17 T 20-04-2016 IPR008991 Translation protein SH3-like domain AMC99_RS04825 4108b2db19859f1ab1957c8d3d3d41d5 187 PANTHER PTHR30053 1 187 2.7E-84 T 20-04-2016 AMC99_RS06225 58224fd0a37d2e2bd57ecb70d81a368e 200 PANTHER PTHR10108 29 173 6.1E-28 T 20-04-2016 AMC99_RS06225 58224fd0a37d2e2bd57ecb70d81a368e 200 Pfam PF08241 Methyltransferase domain 31 126 2.4E-22 T 20-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AMC99_RS06225 58224fd0a37d2e2bd57ecb70d81a368e 200 Gene3D G3DSA:3.40.50.150 24 173 1.7E-31 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS06225 58224fd0a37d2e2bd57ecb70d81a368e 200 SUPERFAMILY SSF53335 21 190 2.61E-33 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS05755 c5c367c29fadb83be8c06300ad1e85c3 255 Pfam PF12706 Beta-lactamase superfamily domain 46 226 2.9E-35 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS05755 c5c367c29fadb83be8c06300ad1e85c3 255 SMART SM00849 34 226 0.0089 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS05755 c5c367c29fadb83be8c06300ad1e85c3 255 PANTHER PTHR12553 2 253 5.0E-49 T 20-04-2016 AMC99_RS05755 c5c367c29fadb83be8c06300ad1e85c3 255 Gene3D G3DSA:3.60.15.10 2 255 9.4E-68 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS05755 c5c367c29fadb83be8c06300ad1e85c3 255 SUPERFAMILY SSF56281 2 253 9.04E-48 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 Pfam PF01339 CheB methylesterase 12 186 7.7E-53 T 20-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 Gene3D G3DSA:3.30.450.20 700 810 8.4E-6 T 20-04-2016 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 PRINTS PR00996 Glutamate methyltransferase family signature 229 242 1.1E-29 T 20-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 PRINTS PR00996 Glutamate methyltransferase family signature 306 326 1.1E-29 T 20-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 PRINTS PR00996 Glutamate methyltransferase family signature 408 422 1.1E-29 T 20-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 PRINTS PR00996 Glutamate methyltransferase family signature 427 450 1.1E-29 T 20-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 PRINTS PR00996 Glutamate methyltransferase family signature 342 358 1.1E-29 T 20-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 PRINTS PR00996 Glutamate methyltransferase family signature 266 278 1.1E-29 T 20-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 SUPERFAMILY SSF47757 209 275 2.48E-12 T 20-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 PANTHER PTHR24422:SF6 102 821 3.1E-170 T 20-04-2016 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 SMART SM00911 951 1031 6.8E-25 T 20-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 Gene3D G3DSA:3.30.450.20 816 936 1.0E-18 T 20-04-2016 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 Gene3D G3DSA:3.40.50.180 7 193 4.2E-61 T 20-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 SUPERFAMILY SSF55785 689 810 2.72E-5 T 20-04-2016 IPR000014 PAS domain AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 Pfam PF07536 HWE histidine kinase 951 1029 3.3E-18 T 20-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 SUPERFAMILY SSF53335 273 464 6.09E-47 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 Pfam PF03705 CheR methyltransferase, all-alpha domain 212 260 4.9E-12 T 20-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 Pfam PF13596 PAS domain 704 810 2.3E-12 T 20-04-2016 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 SMART SM00138 205 468 4.0E-82 T 20-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 PANTHER PTHR24422 102 821 3.1E-170 T 20-04-2016 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 Gene3D G3DSA:3.40.50.150 272 467 1.5E-60 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 Gene3D G3DSA:1.10.155.10 210 270 5.4E-14 T 20-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 Pfam PF08447 PAS fold 854 931 8.9E-8 T 20-04-2016 IPR013655 PAS fold-3 GO:0005515 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 SUPERFAMILY SSF52738 9 193 2.35E-52 T 20-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 SUPERFAMILY SSF55785 809 936 6.11E-13 T 20-04-2016 IPR000014 PAS domain AMC99_RS10850 a98482bd6500a0834092b315ca3e4675 1129 Pfam PF01739 CheR methyltransferase, SAM binding domain 273 464 1.2E-55 T 20-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMC99_RS12790 e50400c3ab14491973873f578f317019 317 SMART SM00271 2 60 7.6E-26 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS12790 e50400c3ab14491973873f578f317019 317 PRINTS PR00625 DnaJ domain signature 40 60 2.5E-18 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS12790 e50400c3ab14491973873f578f317019 317 PRINTS PR00625 DnaJ domain signature 23 38 2.5E-18 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS12790 e50400c3ab14491973873f578f317019 317 PRINTS PR00625 DnaJ domain signature 5 23 2.5E-18 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS12790 e50400c3ab14491973873f578f317019 317 SUPERFAMILY SSF49493 218 295 9.42E-20 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMC99_RS12790 e50400c3ab14491973873f578f317019 317 Pfam PF00226 DnaJ domain 3 65 1.8E-24 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS12790 e50400c3ab14491973873f578f317019 317 SUPERFAMILY SSF46565 2 98 1.7E-26 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS12790 e50400c3ab14491973873f578f317019 317 PANTHER PTHR24078:SF190 112 302 8.1E-67 T 20-04-2016 AMC99_RS12790 e50400c3ab14491973873f578f317019 317 PANTHER PTHR24078:SF190 5 95 8.1E-67 T 20-04-2016 AMC99_RS12790 e50400c3ab14491973873f578f317019 317 Pfam PF01556 DnaJ C terminal domain 150 292 1.3E-29 T 20-04-2016 IPR002939 Chaperone DnaJ, C-terminal AMC99_RS12790 e50400c3ab14491973873f578f317019 317 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 20-04-2016 IPR018253 DnaJ domain, conserved site AMC99_RS12790 e50400c3ab14491973873f578f317019 317 Gene3D G3DSA:1.10.287.110 2 88 1.0E-27 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS12790 e50400c3ab14491973873f578f317019 317 PANTHER PTHR24078 112 302 8.1E-67 T 20-04-2016 AMC99_RS12790 e50400c3ab14491973873f578f317019 317 PANTHER PTHR24078 5 95 8.1E-67 T 20-04-2016 AMC99_RS12790 e50400c3ab14491973873f578f317019 317 Gene3D G3DSA:2.60.260.20 216 292 7.8E-19 T 20-04-2016 AMC99_RS12790 e50400c3ab14491973873f578f317019 317 Gene3D G3DSA:2.60.260.20 144 213 2.5E-13 T 20-04-2016 AMC99_RS12790 e50400c3ab14491973873f578f317019 317 SUPERFAMILY SSF49493 144 219 9.03E-14 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMC99_RS11340 65aef3a55677f575a4da0cb6a92d0131 566 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 541 1.2E-11 T 20-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMC99_RS11340 65aef3a55677f575a4da0cb6a92d0131 566 Gene3D G3DSA:3.40.50.980 44 203 8.3E-33 T 20-04-2016 AMC99_RS11340 65aef3a55677f575a4da0cb6a92d0131 566 Gene3D G3DSA:2.30.38.10 386 456 7.9E-23 T 20-04-2016 AMC99_RS11340 65aef3a55677f575a4da0cb6a92d0131 566 PANTHER PTHR24096 44 553 1.9E-131 T 20-04-2016 AMC99_RS11340 65aef3a55677f575a4da0cb6a92d0131 566 Gene3D G3DSA:3.40.50.980 204 369 2.8E-33 T 20-04-2016 AMC99_RS11340 65aef3a55677f575a4da0cb6a92d0131 566 Pfam PF00501 AMP-binding enzyme 50 462 7.9E-85 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMC99_RS11340 65aef3a55677f575a4da0cb6a92d0131 566 Gene3D G3DSA:3.30.300.30 457 558 8.3E-23 T 20-04-2016 AMC99_RS11340 65aef3a55677f575a4da0cb6a92d0131 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 200 211 - T 20-04-2016 IPR020845 AMP-binding, conserved site AMC99_RS11340 65aef3a55677f575a4da0cb6a92d0131 566 SUPERFAMILY SSF56801 39 561 7.59E-129 T 20-04-2016 AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 SUPERFAMILY SSF52540 338 517 1.0E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 10 48 5.7E-10 T 20-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 SUPERFAMILY SSF50447 516 600 1.68E-26 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 PANTHER PTHR23115:SF184 696 840 5.6E-184 T 20-04-2016 AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 PANTHER PTHR23115:SF184 323 670 5.6E-184 T 20-04-2016 AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 Gene3D G3DSA:3.40.50.300 335 504 9.2E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 PANTHER PTHR23115 696 840 5.6E-184 T 20-04-2016 AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 PANTHER PTHR23115 323 670 5.6E-184 T 20-04-2016 AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 268 317 1.2E-15 T 20-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 SUPERFAMILY SSF52156 626 749 5.1E-35 T 20-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 346 502 7.1E-31 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 Gene3D G3DSA:3.40.50.10050 643 721 1.3E-26 T 20-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 262 842 1.0E-232 T 20-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 Gene3D G3DSA:2.40.30.10 745 840 4.5E-30 T 20-04-2016 AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 Gene3D G3DSA:2.40.30.10 515 608 1.3E-25 T 20-04-2016 AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 7 840 16.6 T 20-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 Pfam PF11987 Translation-initiation factor 2 630 731 7.5E-37 T 20-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 Pfam PF00009 Elongation factor Tu GTP binding domain 348 504 3.4E-29 T 20-04-2016 AMC99_RS08215 6e0deb1fba5642f17dcfad3308a8e82b 842 SUPERFAMILY SSF50447 745 840 6.65E-25 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain AMC99_RS08360 ba9dbe4712b49d754cbd1e53b61b9cec 247 Pfam PF02592 Putative vitamin uptake transporter 57 218 2.9E-53 T 20-04-2016 IPR003744 Protein of unknown function DUF165 AMC99_RS08360 ba9dbe4712b49d754cbd1e53b61b9cec 247 PANTHER PTHR34300:SF2 16 241 1.4E-59 T 20-04-2016 AMC99_RS08360 ba9dbe4712b49d754cbd1e53b61b9cec 247 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 25 224 8.9E-37 T 20-04-2016 IPR003744 Protein of unknown function DUF165 AMC99_RS08360 ba9dbe4712b49d754cbd1e53b61b9cec 247 PANTHER PTHR34300 16 241 1.4E-59 T 20-04-2016 AMC99_RS03755 fbfd75f9288aaa14d8cff1b0745b8082 145 PANTHER PTHR11715:SF13 3 123 6.7E-35 T 20-04-2016 AMC99_RS03755 fbfd75f9288aaa14d8cff1b0745b8082 145 PANTHER PTHR11715 3 123 6.7E-35 T 20-04-2016 IPR002930 Glycine cleavage system H-protein AMC99_RS03755 fbfd75f9288aaa14d8cff1b0745b8082 145 Pfam PF01597 Glycine cleavage H-protein 15 126 5.1E-28 T 20-04-2016 IPR002930 Glycine cleavage system H-protein AMC99_RS03755 fbfd75f9288aaa14d8cff1b0745b8082 145 SUPERFAMILY SSF51230 14 123 3.53E-20 T 20-04-2016 IPR011053 Single hybrid motif AMC99_RS03755 fbfd75f9288aaa14d8cff1b0745b8082 145 Gene3D G3DSA:2.40.50.100 15 122 6.0E-22 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:3.30.2090.10 812 901 1.7E-9 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:3.30.2090.10 185 268 5.0E-10 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 SUPERFAMILY SSF82714 186 268 7.32E-12 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 SUPERFAMILY SSF82693 43 136 2.96E-24 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:1.20.1640.10 302 496 2.7E-49 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 SUPERFAMILY SSF82866 898 1120 5.75E-41 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 Pfam PF00873 AcrB/AcrD/AcrF family 7 503 3.5E-122 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 Pfam PF00873 AcrB/AcrD/AcrF family 633 1118 3.9E-91 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:3.30.70.1430 43 141 6.3E-27 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 5.8E-48 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 5.8E-48 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 5.8E-48 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 PRINTS PR00702 Acriflavin resistance protein family signature 13 37 5.8E-48 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 5.8E-48 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 5.8E-48 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 5.8E-48 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:1.10.3850.10 905 1118 1.5E-47 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:3.30.70.1430 677 754 1.4E-5 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 PANTHER PTHR32063:SF20 607 1133 0.0 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 PANTHER PTHR32063:SF20 4 497 0.0 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 SUPERFAMILY SSF82866 292 492 1.83E-42 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 SUPERFAMILY SSF82714 811 900 1.7E-10 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 SUPERFAMILY SSF82693 270 315 1.94E-8 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 SUPERFAMILY SSF82693 143 184 1.94E-8 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 SUPERFAMILY SSF82693 676 756 2.62E-8 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 PANTHER PTHR32063 607 1133 0.0 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 PANTHER PTHR32063 4 497 0.0 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:3.30.70.1320 272 301 3.2E-4 T 20-04-2016 AMC99_RS12850 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:3.30.70.1320 146 181 3.2E-4 T 20-04-2016 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 20-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 2.4E-54 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 SUPERFAMILY SSF52540 160 545 2.84E-100 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 SUPERFAMILY SSF52540 546 850 6.48E-83 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 20-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 96 146 3.6E-9 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.3E-10 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 Gene3D G3DSA:1.10.8.60 345 430 6.3E-37 T 20-04-2016 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 Gene3D G3DSA:3.40.50.300 550 775 3.0E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 PANTHER PTHR11638:SF18 1 858 0.0 T 20-04-2016 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 206 337 2.6E-13 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 PANTHER PTHR11638 1 858 0.0 T 20-04-2016 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 SUPERFAMILY SSF81923 4 158 2.85E-39 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.9E-41 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.9E-41 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.9E-41 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.9E-41 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 SMART SM01086 766 855 6.3E-40 T 20-04-2016 IPR019489 Clp ATPase, C-terminal AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 846 5.7E-26 T 20-04-2016 IPR019489 Clp ATPase, C-terminal AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 SMART SM00382 200 345 4.5E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 SMART SM00382 597 767 1.4E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 Gene3D G3DSA:3.40.50.300 161 344 8.3E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 Gene3D G3DSA:1.10.1780.10 1 149 5.5E-40 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 20-04-2016 IPR028299 ClpA/B, conserved site 2 AMC99_RS09465 61f5dd2ce1623f427c8b16da50d090d4 858 Gene3D G3DSA:1.10.8.60 776 856 2.1E-31 T 20-04-2016 AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 PANTHER PTHR11699:SF18 540 1019 5.5E-164 T 20-04-2016 AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 SUPERFAMILY SSF81935 16 184 1.44E-62 T 20-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 71 182 2.3E-45 T 20-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 Pfam PF00171 Aldehyde dehydrogenase family 576 1017 4.5E-107 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 Gene3D G3DSA:3.20.20.220 185 531 1.8E-110 T 20-04-2016 IPR029041 FAD-linked oxidoreductase-like AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 PANTHER PTHR11699 540 1019 5.5E-164 T 20-04-2016 AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 SUPERFAMILY SSF51730 185 533 7.85E-118 T 20-04-2016 IPR029041 FAD-linked oxidoreductase-like AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 528 1019 5.0E-218 T 20-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 SUPERFAMILY SSF53720 552 1019 2.88E-121 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 Gene3D G3DSA:3.40.309.10 811 998 1.8E-39 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 Gene3D G3DSA:3.40.605.10 576 810 2.1E-66 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 Gene3D G3DSA:1.20.5.550 15 65 7.4E-18 T 20-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 823 834 - T 20-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 Pfam PF01619 Proline dehydrogenase 192 489 1.2E-96 T 20-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 PIRSF PIRSF000197 1 1215 0.0 T 20-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 AMC99_RS11030 f6a00054801bd1da107ecef933144730 1215 Gene3D G3DSA:1.10.2060.10 66 183 3.3E-51 T 20-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 Gene3D G3DSA:3.40.50.300 404 612 1.8E-84 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 Gene3D G3DSA:3.90.1440.10 230 355 6.4E-45 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 Pfam PF07516 SecA Wing and Scaffold domain 612 820 6.1E-59 T 20-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 SUPERFAMILY SSF81886 892 904 8.11E-77 T 20-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 SUPERFAMILY SSF81886 614 833 8.11E-77 T 20-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 PANTHER PTHR30612 9 507 0.0 T 20-04-2016 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 PANTHER PTHR30612 544 915 0.0 T 20-04-2016 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 825 19.883 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 ProSitePatterns PS01312 SecA family signature. 487 502 - T 20-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 SMART SM00958 228 345 5.2E-66 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 SMART SM00957 6 389 5.6E-296 T 20-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 809 0.0 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 PRINTS PR00906 SecA protein signature 400 413 1.81E-69 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 PRINTS PR00906 SecA protein signature 363 380 1.81E-69 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 PRINTS PR00906 SecA protein signature 101 115 1.81E-69 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 PRINTS PR00906 SecA protein signature 117 127 1.81E-69 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 PRINTS PR00906 SecA protein signature 170 190 1.81E-69 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 PRINTS PR00906 SecA protein signature 326 348 1.81E-69 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 PRINTS PR00906 SecA protein signature 63 87 1.81E-69 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 SUPERFAMILY SSF52540 403 611 2.5E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 Gene3D G3DSA:1.10.3060.10 642 823 3.5E-51 T 20-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 Pfam PF01043 SecA preprotein cross-linking domain 232 345 9.6E-39 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 Pfam PF07517 SecA DEAD-like domain 6 389 2.5E-135 T 20-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 Gene3D G3DSA:3.40.50.300 2 228 8.1E-128 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 Gene3D G3DSA:3.40.50.300 356 403 8.1E-128 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 SUPERFAMILY SSF81767 227 355 2.49E-43 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 SUPERFAMILY SSF52540 355 402 4.2E-85 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 SUPERFAMILY SSF52540 5 228 4.2E-85 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04660 3469883b1824b38ac46c92eb1f732404 915 Pfam PF02810 SEC-C motif 896 913 3.9E-9 T 20-04-2016 IPR004027 SEC-C motif AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 PANTHER PTHR32071:SF15 1 462 1.5E-180 T 20-04-2016 AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 SMART SM00382 157 300 1.7E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 SUPERFAMILY SSF46689 349 461 2.83E-17 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 442 462 7.7E-12 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 442 7.7E-12 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 20-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 20-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 PANTHER PTHR32071 1 462 1.5E-180 T 20-04-2016 AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 SUPERFAMILY SSF52540 137 379 1.24E-72 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 Gene3D G3DSA:3.40.50.2300 3 125 8.9E-30 T 20-04-2016 AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 Gene3D G3DSA:1.10.8.60 310 379 2.8E-20 T 20-04-2016 AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 Gene3D G3DSA:3.40.50.300 136 309 3.0E-61 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 SUPERFAMILY SSF52172 4 181 5.98E-37 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 Gene3D G3DSA:1.10.10.60 408 461 1.8E-17 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 Pfam PF02954 Bacterial regulatory protein, Fis family 419 458 2.8E-13 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 Pfam PF00158 Sigma-54 interaction domain 137 304 3.0E-71 T 20-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 SMART SM00448 3 114 1.6E-25 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS05785 cc65e25e297d1abb22dd7fa3435a4d67 470 Pfam PF00072 Response regulator receiver domain 5 114 1.8E-20 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS06485 052b23bd4e28b0ca3dbb8660e604211e 394 Gene3D G3DSA:3.40.710.10 78 376 1.5E-52 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS06485 052b23bd4e28b0ca3dbb8660e604211e 394 PANTHER PTHR22935:SF2 1 378 1.5E-73 T 20-04-2016 AMC99_RS06485 052b23bd4e28b0ca3dbb8660e604211e 394 PANTHER PTHR22935 1 378 1.5E-73 T 20-04-2016 AMC99_RS06485 052b23bd4e28b0ca3dbb8660e604211e 394 SUPERFAMILY SSF56601 59 389 3.68E-87 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS06485 052b23bd4e28b0ca3dbb8660e604211e 394 SUPERFAMILY SSF56601 6 28 3.68E-87 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS06485 052b23bd4e28b0ca3dbb8660e604211e 394 Pfam PF00144 Beta-lactamase 96 374 5.5E-41 T 20-04-2016 IPR001466 Beta-lactamase-related AMC99_RS06720 240c1821f3057fa2e7ccf7a22086a1df 439 PIRSF PIRSF000362 1 439 1.9E-133 T 20-04-2016 IPR021163 Ferredoxin-NADP+ reductase, adrenodoxin-type GO:0016491|GO:0055114 AMC99_RS06720 240c1821f3057fa2e7ccf7a22086a1df 439 Gene3D G3DSA:3.50.50.60 94 314 2.5E-60 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS06720 240c1821f3057fa2e7ccf7a22086a1df 439 Gene3D G3DSA:3.40.50.720 315 436 8.4E-67 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06720 240c1821f3057fa2e7ccf7a22086a1df 439 Gene3D G3DSA:3.40.50.720 3 93 8.4E-67 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06720 240c1821f3057fa2e7ccf7a22086a1df 439 PANTHER PTHR11938:SF91 1 437 5.7E-135 T 20-04-2016 AMC99_RS06720 240c1821f3057fa2e7ccf7a22086a1df 439 SUPERFAMILY SSF51971 303 439 6.83E-7 T 20-04-2016 AMC99_RS06720 240c1821f3057fa2e7ccf7a22086a1df 439 PRINTS PR00419 Adrenodoxin reductase family signature 144 158 6.9E-18 T 20-04-2016 AMC99_RS06720 240c1821f3057fa2e7ccf7a22086a1df 439 PRINTS PR00419 Adrenodoxin reductase family signature 72 82 6.9E-18 T 20-04-2016 AMC99_RS06720 240c1821f3057fa2e7ccf7a22086a1df 439 PRINTS PR00419 Adrenodoxin reductase family signature 29 42 6.9E-18 T 20-04-2016 AMC99_RS06720 240c1821f3057fa2e7ccf7a22086a1df 439 PRINTS PR00419 Adrenodoxin reductase family signature 3 25 6.9E-18 T 20-04-2016 AMC99_RS06720 240c1821f3057fa2e7ccf7a22086a1df 439 PANTHER PTHR11938 1 437 5.7E-135 T 20-04-2016 AMC99_RS06720 240c1821f3057fa2e7ccf7a22086a1df 439 SUPERFAMILY SSF51971 259 315 1.0E-53 T 20-04-2016 AMC99_RS06720 240c1821f3057fa2e7ccf7a22086a1df 439 SUPERFAMILY SSF51971 3 210 1.0E-53 T 20-04-2016 AMC99_RS06720 240c1821f3057fa2e7ccf7a22086a1df 439 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 166 2.5E-11 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS05135 98597175011deaf72aa88140329e7b46 343 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 341 5.9E-115 T 20-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS05135 98597175011deaf72aa88140329e7b46 343 Gene3D G3DSA:2.40.10.240 64 140 1.1E-14 T 20-04-2016 AMC99_RS05135 98597175011deaf72aa88140329e7b46 343 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 43.947 T 20-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS05135 98597175011deaf72aa88140329e7b46 343 PANTHER PTHR30307:SF0 2 343 3.2E-157 T 20-04-2016 AMC99_RS05135 98597175011deaf72aa88140329e7b46 343 SUPERFAMILY SSF111337 1 342 9.29E-127 T 20-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS05135 98597175011deaf72aa88140329e7b46 343 PANTHER PTHR30307 2 343 3.2E-157 T 20-04-2016 AMC99_RS05135 98597175011deaf72aa88140329e7b46 343 Pfam PF02547 Queuosine biosynthesis protein 4 341 2.6E-124 T 20-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS05135 98597175011deaf72aa88140329e7b46 343 Gene3D G3DSA:3.40.1780.10 179 342 5.1E-94 T 20-04-2016 AMC99_RS05135 98597175011deaf72aa88140329e7b46 343 Gene3D G3DSA:3.40.1780.10 1 62 5.1E-94 T 20-04-2016 AMC99_RS07010 8b808f4c2bb958b5d6b34137f6d6b181 236 Pfam PF04002 RadC-like JAB domain 116 234 8.1E-43 T 20-04-2016 IPR025657 RadC-like JAB domain AMC99_RS07010 8b808f4c2bb958b5d6b34137f6d6b181 236 TIGRFAM TIGR00608 radc: DNA repair protein RadC 23 236 1.4E-71 T 20-04-2016 IPR001405 RadC protein AMC99_RS07010 8b808f4c2bb958b5d6b34137f6d6b181 236 PANTHER PTHR30471 10 236 1.7E-79 T 20-04-2016 AMC99_RS07010 8b808f4c2bb958b5d6b34137f6d6b181 236 SUPERFAMILY SSF47781 27 96 4.45E-10 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMC99_RS07010 8b808f4c2bb958b5d6b34137f6d6b181 236 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 185 190 - T 20-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site AMC99_RS07010 8b808f4c2bb958b5d6b34137f6d6b181 236 Gene3D G3DSA:1.10.150.20 59 95 2.7E-8 T 20-04-2016 AMC99_RS07010 8b808f4c2bb958b5d6b34137f6d6b181 236 SUPERFAMILY SSF102712 164 202 2.62E-5 T 20-04-2016 AMC99_RS07010 8b808f4c2bb958b5d6b34137f6d6b181 236 PANTHER PTHR30471:SF3 10 236 1.7E-79 T 20-04-2016 AMC99_RS07010 8b808f4c2bb958b5d6b34137f6d6b181 236 Gene3D G3DSA:3.40.140.10 112 236 4.1E-48 T 20-04-2016 AMC99_RS04500 38ed45da7b8bb022f0916427fcc462db 268 Pfam PF00756 Putative esterase 29 194 1.6E-17 T 20-04-2016 IPR000801 Putative esterase AMC99_RS04500 38ed45da7b8bb022f0916427fcc462db 268 Gene3D G3DSA:3.40.50.1820 30 249 3.8E-43 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS04500 38ed45da7b8bb022f0916427fcc462db 268 PANTHER PTHR40841:SF2 31 179 5.8E-17 T 20-04-2016 AMC99_RS04500 38ed45da7b8bb022f0916427fcc462db 268 PANTHER PTHR40841 31 179 5.8E-17 T 20-04-2016 AMC99_RS04500 38ed45da7b8bb022f0916427fcc462db 268 SUPERFAMILY SSF53474 12 249 1.0E-36 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS07875 78f9df1fc51e209c39ce1dd77c05ae82 165 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 20-04-2016 IPR020549 Endoribonuclease YbeY, conserved site AMC99_RS07875 78f9df1fc51e209c39ce1dd77c05ae82 165 Pfam PF02130 Uncharacterized protein family UPF0054 15 151 5.0E-30 T 20-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMC99_RS07875 78f9df1fc51e209c39ce1dd77c05ae82 165 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 156 21.078 T 20-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMC99_RS07875 78f9df1fc51e209c39ce1dd77c05ae82 165 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 41 153 1.5E-31 T 20-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMC99_RS07875 78f9df1fc51e209c39ce1dd77c05ae82 165 PANTHER PTHR22881 16 163 1.1E-35 T 20-04-2016 AMC99_RS07875 78f9df1fc51e209c39ce1dd77c05ae82 165 Gene3D G3DSA:3.40.390.30 15 162 3.6E-40 T 20-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 AMC99_RS07875 78f9df1fc51e209c39ce1dd77c05ae82 165 SUPERFAMILY SSF55486 16 161 1.71E-38 T 20-04-2016 AMC99_RS05580 d5852872534d580505051dae23eeff09 211 Pfam PF01725 Ham1 family 12 206 2.2E-49 T 20-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMC99_RS05580 d5852872534d580505051dae23eeff09 211 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 12 205 9.8E-50 T 20-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMC99_RS05580 d5852872534d580505051dae23eeff09 211 PANTHER PTHR11067:SF9 5 206 4.2E-63 T 20-04-2016 AMC99_RS05580 d5852872534d580505051dae23eeff09 211 SUPERFAMILY SSF52972 10 206 1.26E-62 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMC99_RS05580 d5852872534d580505051dae23eeff09 211 Gene3D G3DSA:3.90.950.10 9 206 2.0E-69 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMC99_RS05580 d5852872534d580505051dae23eeff09 211 PANTHER PTHR11067 5 206 4.2E-63 T 20-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMC99_RS05580 d5852872534d580505051dae23eeff09 211 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 10 210 44.485 T 20-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMC99_RS08675 18f1e4538becf60578df72d15ffc6191 143 Pfam PF07475 HPr Serine kinase C-terminal domain 13 82 3.3E-14 T 20-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 AMC99_RS08675 18f1e4538becf60578df72d15ffc6191 143 SUPERFAMILY SSF53795 7 118 2.72E-18 T 20-04-2016 AMC99_RS08675 18f1e4538becf60578df72d15ffc6191 143 Gene3D G3DSA:3.40.50.300 12 126 2.2E-26 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10985 252d9d94ba826d27d0c643a842f4991f 305 PANTHER PTHR21363 3 286 9.8E-72 T 20-04-2016 AMC99_RS10985 252d9d94ba826d27d0c643a842f4991f 305 PANTHER PTHR21363:SF0 3 286 9.8E-72 T 20-04-2016 AMC99_RS10985 252d9d94ba826d27d0c643a842f4991f 305 SUPERFAMILY SSF48179 174 284 9.98E-35 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMC99_RS10985 252d9d94ba826d27d0c643a842f4991f 305 Pfam PF02153 Prephenate dehydrogenase 18 274 6.2E-75 T 20-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AMC99_RS10985 252d9d94ba826d27d0c643a842f4991f 305 SUPERFAMILY SSF51735 5 170 3.82E-45 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS10985 252d9d94ba826d27d0c643a842f4991f 305 Gene3D G3DSA:3.40.50.720 1 179 3.8E-39 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS07810 c423e74b6fea3c53d451fdb523d9ee51 419 SUPERFAMILY SSF109854 13 145 3.3E-6 T 20-04-2016 AMC99_RS07810 c423e74b6fea3c53d451fdb523d9ee51 419 Pfam PF12867 DinB superfamily 19 147 5.7E-10 T 20-04-2016 IPR024775 DinB-like domain AMC99_RS07810 c423e74b6fea3c53d451fdb523d9ee51 419 Gene3D G3DSA:3.90.1580.10 171 418 1.2E-55 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMC99_RS07810 c423e74b6fea3c53d451fdb523d9ee51 419 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 16 416 2.6E-157 T 20-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 AMC99_RS07810 c423e74b6fea3c53d451fdb523d9ee51 419 Pfam PF03781 Sulfatase-modifying factor enzyme 1 180 417 3.7E-26 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMC99_RS07810 c423e74b6fea3c53d451fdb523d9ee51 419 PANTHER PTHR23150:SF24 15 419 9.3E-98 T 20-04-2016 AMC99_RS07810 c423e74b6fea3c53d451fdb523d9ee51 419 PANTHER PTHR23150 15 419 9.3E-98 T 20-04-2016 AMC99_RS07810 c423e74b6fea3c53d451fdb523d9ee51 419 SUPERFAMILY SSF56436 179 418 8.24E-62 T 20-04-2016 IPR016187 C-type lectin fold AMC99_RS09690 2141e3d8bfcd30e8bc50f13ace390c76 436 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 416 9.6E-141 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AMC99_RS09690 2141e3d8bfcd30e8bc50f13ace390c76 436 PANTHER PTHR11374:SF18 1 435 4.7E-231 T 20-04-2016 AMC99_RS09690 2141e3d8bfcd30e8bc50f13ace390c76 436 PIRSF PIRSF000124 1 435 1.0E-145 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AMC99_RS09690 2141e3d8bfcd30e8bc50f13ace390c76 436 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 319 420 1.2E-31 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AMC99_RS09690 2141e3d8bfcd30e8bc50f13ace390c76 436 Gene3D G3DSA:3.40.50.720 1 204 9.9E-76 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09690 2141e3d8bfcd30e8bc50f13ace390c76 436 PANTHER PTHR11374 1 435 4.7E-231 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AMC99_RS09690 2141e3d8bfcd30e8bc50f13ace390c76 436 SUPERFAMILY SSF48179 201 294 2.21E-33 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMC99_RS09690 2141e3d8bfcd30e8bc50f13ace390c76 436 SUPERFAMILY SSF51735 1 189 3.09E-55 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09690 2141e3d8bfcd30e8bc50f13ace390c76 436 SUPERFAMILY SSF52413 313 430 9.42E-38 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AMC99_RS09690 2141e3d8bfcd30e8bc50f13ace390c76 436 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 183 2.2E-66 T 20-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 AMC99_RS09690 2141e3d8bfcd30e8bc50f13ace390c76 436 PIRSF PIRSF500134 1 436 2.0E-183 T 20-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 AMC99_RS09690 2141e3d8bfcd30e8bc50f13ace390c76 436 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 201 293 2.1E-38 T 20-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 AMC99_RS09690 2141e3d8bfcd30e8bc50f13ace390c76 436 SMART SM00984 319 420 4.8E-49 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AMC99_RS09690 2141e3d8bfcd30e8bc50f13ace390c76 436 Gene3D G3DSA:3.40.50.720 232 435 7.3E-76 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09690 2141e3d8bfcd30e8bc50f13ace390c76 436 Gene3D G3DSA:1.20.5.100 205 231 7.8E-20 T 20-04-2016 AMC99_RS08265 dd68a9e1590bbcba387ff87201c8dad7 126 Pfam PF04024 PspC domain 7 64 1.9E-14 T 20-04-2016 IPR007168 Phage shock protein, PspC, N-terminal AMC99_RS08265 dd68a9e1590bbcba387ff87201c8dad7 126 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 6 125 8.8E-39 T 20-04-2016 IPR014320 Phage shock protein, PspC AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 SUPERFAMILY SSF56954 132 218 9.42E-6 T 20-04-2016 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 Pfam PF02321 Outer membrane efflux protein 137 223 1.4E-8 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 Gene3D G3DSA:1.20.1600.10 137 224 2.9E-4 T 20-04-2016 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 PANTHER PTHR30386 128 418 2.9E-108 T 20-04-2016 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 PANTHER PTHR30386 11 103 2.9E-108 T 20-04-2016 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 Pfam PF13437 HlyD family secretion protein 269 380 2.2E-18 T 20-04-2016 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 397 417 8.9E-43 T 20-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 281 302 8.9E-43 T 20-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 338 8.9E-43 T 20-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 18 41 8.9E-43 T 20-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 60 80 8.9E-43 T 20-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 382 397 8.9E-43 T 20-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 338 361 8.9E-43 T 20-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 12 418 6.3E-108 T 20-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 PANTHER PTHR30386:SF4 128 418 2.9E-108 T 20-04-2016 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 PANTHER PTHR30386:SF4 11 103 2.9E-108 T 20-04-2016 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 ProSitePatterns PS00543 HlyD family secretion proteins signature. 382 404 - T 20-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 Gene3D G3DSA:2.40.50.100 266 300 1.1E-14 T 20-04-2016 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 Gene3D G3DSA:2.40.50.100 52 82 1.1E-14 T 20-04-2016 AMC99_RS07590 8daa4290118ebbef4040c01b257507f4 418 Pfam PF13533 Biotin-lipoyl like 52 91 2.3E-7 T 20-04-2016 AMC99_RS04715 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 3.4E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04715 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.4E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04715 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 3.4E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04715 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 3.4E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04715 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.4E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04715 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 3.4E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04715 e6a36a98bafd8c136aa1de51177f0b60 252 Gene3D G3DSA:3.40.50.720 3 251 4.4E-75 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS04715 e6a36a98bafd8c136aa1de51177f0b60 252 PANTHER PTHR24322 159 191 1.7E-42 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04715 e6a36a98bafd8c136aa1de51177f0b60 252 PANTHER PTHR24322 13 143 1.7E-42 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04715 e6a36a98bafd8c136aa1de51177f0b60 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS04715 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 5.2E-5 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04715 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 5.2E-5 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04715 e6a36a98bafd8c136aa1de51177f0b60 252 SUPERFAMILY SSF51735 3 251 3.1E-71 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS04715 e6a36a98bafd8c136aa1de51177f0b60 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 250 6.4E-53 T 20-04-2016 AMC99_RS04715 e6a36a98bafd8c136aa1de51177f0b60 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 185 2.8E-4 T 20-04-2016 AMC99_RS12865 08f10e46c0c0c7894fb4d1931939e075 309 Gene3D G3DSA:3.40.50.1220 183 309 9.1E-59 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMC99_RS12865 08f10e46c0c0c7894fb4d1931939e075 309 SUPERFAMILY SSF52402 2 182 5.16E-55 T 20-04-2016 AMC99_RS12865 08f10e46c0c0c7894fb4d1931939e075 309 SMART SM00893 3 181 8.0E-54 T 20-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AMC99_RS12865 08f10e46c0c0c7894fb4d1931939e075 309 Pfam PF01012 Electron transfer flavoprotein domain 3 167 1.4E-40 T 20-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AMC99_RS12865 08f10e46c0c0c7894fb4d1931939e075 309 PANTHER PTHR10909 103 308 1.0E-115 T 20-04-2016 AMC99_RS12865 08f10e46c0c0c7894fb4d1931939e075 309 PANTHER PTHR10909:SF294 103 308 1.0E-115 T 20-04-2016 AMC99_RS12865 08f10e46c0c0c7894fb4d1931939e075 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 272 3.1E-34 T 20-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal AMC99_RS12865 08f10e46c0c0c7894fb4d1931939e075 309 PIRSF PIRSF000089 1 309 1.6E-104 T 20-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 AMC99_RS12865 08f10e46c0c0c7894fb4d1931939e075 309 SUPERFAMILY SSF52467 188 309 6.0E-45 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMC99_RS12865 08f10e46c0c0c7894fb4d1931939e075 309 Gene3D G3DSA:3.40.50.620 1 180 2.0E-61 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS11355 3f3eb8818c1a9c22e7abc5bead19abd0 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 20-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AMC99_RS11355 3f3eb8818c1a9c22e7abc5bead19abd0 506 PANTHER PTHR11699:SF97 1 506 0.0 T 20-04-2016 AMC99_RS11355 3f3eb8818c1a9c22e7abc5bead19abd0 506 SUPERFAMILY SSF53720 11 499 1.57E-161 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMC99_RS11355 3f3eb8818c1a9c22e7abc5bead19abd0 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 7.5E-166 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS11355 3f3eb8818c1a9c22e7abc5bead19abd0 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 20-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AMC99_RS11355 3f3eb8818c1a9c22e7abc5bead19abd0 506 Gene3D G3DSA:3.40.309.10 271 469 3.3E-61 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMC99_RS11355 3f3eb8818c1a9c22e7abc5bead19abd0 506 Gene3D G3DSA:3.40.605.10 17 270 1.5E-91 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS11355 3f3eb8818c1a9c22e7abc5bead19abd0 506 PANTHER PTHR11699 1 506 0.0 T 20-04-2016 AMC99_RS07530 1ff681c30b78ce02924a4eba7ecbe95e 278 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.9E-116 T 20-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMC99_RS07530 1ff681c30b78ce02924a4eba7ecbe95e 278 SUPERFAMILY SSF50249 2 123 1.17E-45 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS07530 1ff681c30b78ce02924a4eba7ecbe95e 278 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 20-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 AMC99_RS07530 1ff681c30b78ce02924a4eba7ecbe95e 278 SMART SM01382 124 252 1.5E-77 T 20-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMC99_RS07530 1ff681c30b78ce02924a4eba7ecbe95e 278 PANTHER PTHR13691:SF5 1 278 2.5E-124 T 20-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMC99_RS07530 1ff681c30b78ce02924a4eba7ecbe95e 278 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.6E-30 T 20-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07530 1ff681c30b78ce02924a4eba7ecbe95e 278 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 5.8E-51 T 20-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMC99_RS07530 1ff681c30b78ce02924a4eba7ecbe95e 278 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 43.182 T 20-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMC99_RS07530 1ff681c30b78ce02924a4eba7ecbe95e 278 PANTHER PTHR13691 1 278 2.5E-124 T 20-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07530 1ff681c30b78ce02924a4eba7ecbe95e 278 Gene3D G3DSA:2.30.30.30 120 195 3.6E-29 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 AMC99_RS07530 1ff681c30b78ce02924a4eba7ecbe95e 278 Gene3D G3DSA:2.40.50.140 1 114 3.9E-48 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS07530 1ff681c30b78ce02924a4eba7ecbe95e 278 SUPERFAMILY SSF50104 126 272 2.35E-56 T 20-04-2016 IPR008991 Translation protein SH3-like domain AMC99_RS07530 1ff681c30b78ce02924a4eba7ecbe95e 278 Gene3D G3DSA:4.10.950.10 196 273 2.9E-31 T 20-04-2016 IPR014726 Ribosomal protein L2, domain 3 AMC99_RS07530 1ff681c30b78ce02924a4eba7ecbe95e 278 PIRSF PIRSF002158 3 275 1.2E-97 T 20-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07530 1ff681c30b78ce02924a4eba7ecbe95e 278 SMART SM01383 42 118 3.0E-41 T 20-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03960 415570bbb20873b17c28c11244dbc57a 344 SUPERFAMILY SSF53067 102 308 1.02E-40 T 20-04-2016 AMC99_RS03960 415570bbb20873b17c28c11244dbc57a 344 Gene3D G3DSA:3.30.420.40 3 160 5.9E-46 T 20-04-2016 AMC99_RS03960 415570bbb20873b17c28c11244dbc57a 344 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 305 5.9E-99 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMC99_RS03960 415570bbb20873b17c28c11244dbc57a 344 Pfam PF00814 Glycoprotease family 25 306 7.7E-95 T 20-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMC99_RS03960 415570bbb20873b17c28c11244dbc57a 344 PANTHER PTHR11735 1 331 1.6E-138 T 20-04-2016 AMC99_RS03960 415570bbb20873b17c28c11244dbc57a 344 PANTHER PTHR11735:SF6 1 331 1.6E-138 T 20-04-2016 AMC99_RS03960 415570bbb20873b17c28c11244dbc57a 344 SUPERFAMILY SSF53067 4 124 7.51E-31 T 20-04-2016 AMC99_RS03960 415570bbb20873b17c28c11244dbc57a 344 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 2 330 60.273 T 20-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMC99_RS03960 415570bbb20873b17c28c11244dbc57a 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 132 144 1.6E-44 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMC99_RS03960 415570bbb20873b17c28c11244dbc57a 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 262 271 1.6E-44 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMC99_RS03960 415570bbb20873b17c28c11244dbc57a 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 98 117 1.6E-44 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMC99_RS03960 415570bbb20873b17c28c11244dbc57a 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 155 176 1.6E-44 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMC99_RS03960 415570bbb20873b17c28c11244dbc57a 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 5 18 1.6E-44 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMC99_RS03960 415570bbb20873b17c28c11244dbc57a 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 77 97 1.6E-44 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMC99_RS03960 415570bbb20873b17c28c11244dbc57a 344 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 4 312 2.3E-124 T 20-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMC99_RS00765 2986c499046c6ee9852b925cd0373bd4 384 Gene3D G3DSA:2.40.110.10 128 227 8.9E-31 T 20-04-2016 AMC99_RS00765 2986c499046c6ee9852b925cd0373bd4 384 SUPERFAMILY SSF56645 12 250 1.44E-66 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS00765 2986c499046c6ee9852b925cd0373bd4 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 225 9.5E-22 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS00765 2986c499046c6ee9852b925cd0373bd4 384 Gene3D G3DSA:1.20.140.10 228 381 5.3E-12 T 20-04-2016 AMC99_RS00765 2986c499046c6ee9852b925cd0373bd4 384 Gene3D G3DSA:1.10.540.10 12 126 2.0E-28 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS00765 2986c499046c6ee9852b925cd0373bd4 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 125 3.0E-26 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS00765 2986c499046c6ee9852b925cd0373bd4 384 PANTHER PTHR10909:SF242 11 381 2.8E-88 T 20-04-2016 AMC99_RS00765 2986c499046c6ee9852b925cd0373bd4 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_RS00765 2986c499046c6ee9852b925cd0373bd4 384 SUPERFAMILY SSF47203 238 381 5.93E-6 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS00765 2986c499046c6ee9852b925cd0373bd4 384 PANTHER PTHR10909 11 381 2.8E-88 T 20-04-2016 AMC99_RS00765 2986c499046c6ee9852b925cd0373bd4 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 381 1.8E-4 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS10105 0623b8951a4d7453372338410ab44705 409 PANTHER PTHR33121:SF13 157 409 1.2E-65 T 20-04-2016 AMC99_RS10105 0623b8951a4d7453372338410ab44705 409 PANTHER PTHR33121 157 409 1.2E-65 T 20-04-2016 AMC99_RS10105 0623b8951a4d7453372338410ab44705 409 SUPERFAMILY SSF141868 174 408 1.7E-77 T 20-04-2016 IPR001633 EAL domain AMC99_RS10105 0623b8951a4d7453372338410ab44705 409 SMART SM00267 1 158 3.1E-32 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS10105 0623b8951a4d7453372338410ab44705 409 Pfam PF00990 Diguanylate cyclase, GGDEF domain 2 153 3.0E-33 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS10105 0623b8951a4d7453372338410ab44705 409 Gene3D G3DSA:3.30.70.270 3 163 4.3E-42 T 20-04-2016 AMC99_RS10105 0623b8951a4d7453372338410ab44705 409 Pfam PF00563 EAL domain 174 403 5.8E-65 T 20-04-2016 IPR001633 EAL domain AMC99_RS10105 0623b8951a4d7453372338410ab44705 409 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 2 155 1.6E-28 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS10105 0623b8951a4d7453372338410ab44705 409 Gene3D G3DSA:3.20.20.450 171 408 1.3E-80 T 20-04-2016 IPR001633 EAL domain AMC99_RS10105 0623b8951a4d7453372338410ab44705 409 SMART SM00052 168 409 7.3E-88 T 20-04-2016 IPR001633 EAL domain AMC99_RS10105 0623b8951a4d7453372338410ab44705 409 SUPERFAMILY SSF55073 5 159 4.39E-37 T 20-04-2016 IPR029787 Nucleotide cyclase AMC99_RS00590 8c3956c0b13a360ea842fb4f8f51c9ab 245 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 23 210 9.6E-58 T 20-04-2016 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein AMC99_RS00590 8c3956c0b13a360ea842fb4f8f51c9ab 245 Pfam PF04055 Radical SAM superfamily 41 181 2.4E-12 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_RS00590 8c3956c0b13a360ea842fb4f8f51c9ab 245 SUPERFAMILY SSF102114 32 229 4.19E-23 T 20-04-2016 AMC99_RS00590 8c3956c0b13a360ea842fb4f8f51c9ab 245 Pfam PF13353 4Fe-4S single cluster domain 34 109 1.8E-6 T 20-04-2016 AMC99_RS00590 8c3956c0b13a360ea842fb4f8f51c9ab 245 PANTHER PTHR11228 28 215 5.3E-32 T 20-04-2016 AMC99_RS00590 8c3956c0b13a360ea842fb4f8f51c9ab 245 Gene3D G3DSA:3.20.20.70 34 205 1.9E-20 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS00590 8c3956c0b13a360ea842fb4f8f51c9ab 245 PANTHER PTHR11228:SF27 28 215 5.3E-32 T 20-04-2016 AMC99_RS01955 f2f56fb9a48905d8e4ea757603422e91 70 Gene3D G3DSA:2.40.50.140 3 67 2.8E-23 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS01955 f2f56fb9a48905d8e4ea757603422e91 70 PANTHER PTHR11544 4 59 1.3E-13 T 20-04-2016 AMC99_RS01955 f2f56fb9a48905d8e4ea757603422e91 70 PIRSF PIRSF002599 1 70 1.9E-19 T 20-04-2016 IPR012156 Cold shock, CspA GO:0003676 AMC99_RS01955 f2f56fb9a48905d8e4ea757603422e91 70 PRINTS PR00050 Cold shock protein signature 5 20 1.0E-10 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_RS01955 f2f56fb9a48905d8e4ea757603422e91 70 PRINTS PR00050 Cold shock protein signature 41 59 1.0E-10 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_RS01955 f2f56fb9a48905d8e4ea757603422e91 70 PRINTS PR00050 Cold shock protein signature 26 35 1.0E-10 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_RS01955 f2f56fb9a48905d8e4ea757603422e91 70 SMART SM00357 4 69 3.7E-18 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 AMC99_RS01955 f2f56fb9a48905d8e4ea757603422e91 70 SUPERFAMILY SSF50249 3 67 4.93E-19 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS01955 f2f56fb9a48905d8e4ea757603422e91 70 Pfam PF00313 'Cold-shock' DNA-binding domain 4 67 1.8E-21 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_RS01955 f2f56fb9a48905d8e4ea757603422e91 70 PANTHER PTHR11544:SF54 4 59 1.3E-13 T 20-04-2016 AMC99_RS12960 c4b2f7c2c8236e08acce0c91f70f5558 509 PANTHER PTHR34473 1 508 3.2E-44 T 20-04-2016 AMC99_RS12960 c4b2f7c2c8236e08acce0c91f70f5558 509 PIRSF PIRSF026631 3 506 1.3E-59 T 20-04-2016 IPR014529 Uncharacterised conserved protein UCP026631 AMC99_RS12960 c4b2f7c2c8236e08acce0c91f70f5558 509 Pfam PF03703 Bacterial PH domain 65 143 3.4E-19 T 20-04-2016 IPR005182 Domain of unknown function DUF304 AMC99_RS12960 c4b2f7c2c8236e08acce0c91f70f5558 509 Pfam PF03703 Bacterial PH domain 420 496 1.1E-6 T 20-04-2016 IPR005182 Domain of unknown function DUF304 AMC99_RS12960 c4b2f7c2c8236e08acce0c91f70f5558 509 PANTHER PTHR34473:SF1 1 508 3.2E-44 T 20-04-2016 AMC99_RS09810 1eb90e3be2c2e41a2c659aac5e7e08f3 424 Pfam PF04235 Protein of unknown function (DUF418) 256 418 2.9E-40 T 20-04-2016 IPR007349 Domain of unknown function DUF418 AMC99_RS09810 1eb90e3be2c2e41a2c659aac5e7e08f3 424 PANTHER PTHR30590:SF2 10 424 1.7E-82 T 20-04-2016 AMC99_RS09810 1eb90e3be2c2e41a2c659aac5e7e08f3 424 PANTHER PTHR30590 10 424 1.7E-82 T 20-04-2016 AMC99_RS08725 f5dadc258b104fec2561028c573690b5 309 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 299 35.878 T 20-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_RS08725 f5dadc258b104fec2561028c573690b5 309 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 296 5.2E-87 T 20-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_RS08725 f5dadc258b104fec2561028c573690b5 309 SUPERFAMILY SSF50486 201 304 2.51E-26 T 20-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AMC99_RS08725 f5dadc258b104fec2561028c573690b5 309 Gene3D G3DSA:3.40.50.170 1 201 3.6E-71 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_RS08725 f5dadc258b104fec2561028c573690b5 309 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 132 155 - T 20-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_RS08725 f5dadc258b104fec2561028c573690b5 309 Pfam PF00551 Formyl transferase 1 177 3.9E-43 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_RS08725 f5dadc258b104fec2561028c573690b5 309 SUPERFAMILY SSF53328 1 203 1.06E-63 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_RS08725 f5dadc258b104fec2561028c573690b5 309 Pfam PF02911 Formyl transferase, C-terminal domain 200 296 1.0E-22 T 20-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_RS08725 f5dadc258b104fec2561028c573690b5 309 PANTHER PTHR11138 1 295 4.6E-104 T 20-04-2016 AMC99_RS08725 f5dadc258b104fec2561028c573690b5 309 Gene3D G3DSA:3.10.25.10 203 304 9.8E-27 T 20-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_RS03380 fdc2b7e8a8548865394fecd006aeedc2 228 SMART SM00935 16 172 2.4E-7 T 20-04-2016 IPR005632 Chaperone protein Skp GO:0051082 AMC99_RS03380 fdc2b7e8a8548865394fecd006aeedc2 228 Pfam PF03938 Outer membrane protein (OmpH-like) 15 170 3.1E-8 T 20-04-2016 IPR005632 Chaperone protein Skp GO:0051082 AMC99_RS03380 fdc2b7e8a8548865394fecd006aeedc2 228 SUPERFAMILY SSF111384 30 172 1.23E-13 T 20-04-2016 IPR024930 Skp domain AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 Gene3D G3DSA:1.10.10.350 370 446 1.7E-13 T 20-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 SUPERFAMILY SSF48163 291 446 6.15E-29 T 20-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 PANTHER PTHR11451 2 316 5.8E-68 T 20-04-2016 AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 Gene3D G3DSA:3.40.50.620 184 240 1.5E-44 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 Gene3D G3DSA:3.40.50.620 2 69 1.5E-44 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 Gene3D G3DSA:1.10.1160.10 244 323 5.5E-17 T 20-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 Gene3D G3DSA:3.90.800.10 70 181 2.7E-31 T 20-04-2016 AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 2 447 26.864 T 20-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 SUPERFAMILY SSF52374 1 306 1.18E-91 T 20-04-2016 AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 19 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 PANTHER PTHR11451:SF41 2 316 5.8E-68 T 20-04-2016 AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 1.3E-19 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.3E-19 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 30 1.3E-19 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 1.3E-19 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 338 3.8E-94 T 20-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMC99_RS13715 d04b3a18324ad54f43ddb474c38a78fa 449 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 313 1.8E-70 T 20-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS00105 700342dd9077ceda9ea4fd316a4a6e03 159 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 146 1.3E-22 T 20-04-2016 IPR002810 NfeD-like, C-terminal domain AMC99_RS00105 700342dd9077ceda9ea4fd316a4a6e03 159 Gene3D G3DSA:2.40.50.140 93 146 3.9E-14 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS00105 700342dd9077ceda9ea4fd316a4a6e03 159 PANTHER PTHR33507:SF3 7 149 4.2E-37 T 20-04-2016 AMC99_RS00105 700342dd9077ceda9ea4fd316a4a6e03 159 PANTHER PTHR33507 7 149 4.2E-37 T 20-04-2016 AMC99_RS08210 87f8cf364309ae3bc5bf5ec06df7a9a7 122 PANTHER PTHR12418 1 118 1.3E-12 T 20-04-2016 AMC99_RS08210 87f8cf364309ae3bc5bf5ec06df7a9a7 122 Gene3D G3DSA:3.10.129.10 1 113 1.6E-25 T 20-04-2016 IPR029069 HotDog domain AMC99_RS08210 87f8cf364309ae3bc5bf5ec06df7a9a7 122 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 2 112 5.7E-14 T 20-04-2016 IPR003736 Phenylacetic acid degradation-related domain AMC99_RS08210 87f8cf364309ae3bc5bf5ec06df7a9a7 122 Pfam PF03061 Thioesterase superfamily 30 105 5.5E-7 T 20-04-2016 IPR006683 Thioesterase domain AMC99_RS08210 87f8cf364309ae3bc5bf5ec06df7a9a7 122 SUPERFAMILY SSF54637 7 112 8.3E-23 T 20-04-2016 IPR029069 HotDog domain AMC99_RS05175 53bbb6bb6ea1b53588f6f5262e831430 204 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 6 204 1.8E-65 T 20-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMC99_RS05175 53bbb6bb6ea1b53588f6f5262e831430 204 SUPERFAMILY SSF55174 6 204 3.79E-56 T 20-04-2016 AMC99_RS05175 53bbb6bb6ea1b53588f6f5262e831430 204 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 204 30.113 T 20-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMC99_RS05175 53bbb6bb6ea1b53588f6f5262e831430 204 PANTHER PTHR11831:SF4 1 204 8.0E-68 T 20-04-2016 AMC99_RS05175 53bbb6bb6ea1b53588f6f5262e831430 204 Pfam PF01479 S4 domain 94 141 1.7E-16 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS05175 53bbb6bb6ea1b53588f6f5262e831430 204 PANTHER PTHR11831 1 204 8.0E-68 T 20-04-2016 IPR022801 Ribosomal protein S4/S9 AMC99_RS05175 53bbb6bb6ea1b53588f6f5262e831430 204 ProSitePatterns PS00632 Ribosomal protein S4 signature. 92 116 - T 20-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 AMC99_RS05175 53bbb6bb6ea1b53588f6f5262e831430 204 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 5 93 5.1E-22 T 20-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 AMC99_RS05175 53bbb6bb6ea1b53588f6f5262e831430 204 SMART SM01390 3 93 6.8E-39 T 20-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 AMC99_RS05175 53bbb6bb6ea1b53588f6f5262e831430 204 SMART SM00363 94 158 1.6E-16 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS05175 53bbb6bb6ea1b53588f6f5262e831430 204 Gene3D G3DSA:1.10.1050.10 1 96 5.3E-34 T 20-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 AMC99_RS05175 53bbb6bb6ea1b53588f6f5262e831430 204 Gene3D G3DSA:3.10.290.10 97 192 2.7E-25 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS04100 c0a2e6cc5b28fd94b3f51549a4c1d05c 358 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 332 1.9E-17 T 20-04-2016 IPR003395 RecF/RecN/SMC, N-terminal AMC99_RS04100 c0a2e6cc5b28fd94b3f51549a4c1d05c 358 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 20-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AMC99_RS04100 c0a2e6cc5b28fd94b3f51549a4c1d05c 358 SUPERFAMILY SSF52540 1 331 1.16E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04100 c0a2e6cc5b28fd94b3f51549a4c1d05c 358 Gene3D G3DSA:3.40.50.300 1 174 2.3E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04100 c0a2e6cc5b28fd94b3f51549a4c1d05c 358 Gene3D G3DSA:3.40.50.300 232 331 2.3E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04100 c0a2e6cc5b28fd94b3f51549a4c1d05c 358 PANTHER PTHR32182 1 342 8.6E-24 T 20-04-2016 AMC99_RS04100 c0a2e6cc5b28fd94b3f51549a4c1d05c 358 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 358 78.113 T 20-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AMC99_RS07915 68c7b01097b6f3eb8d73379cac3394ba 486 Gene3D G3DSA:1.25.60.10 37 163 7.3E-28 T 20-04-2016 AMC99_RS07915 68c7b01097b6f3eb8d73379cac3394ba 486 SUPERFAMILY SSF158791 43 168 1.44E-27 T 20-04-2016 AMC99_RS07915 68c7b01097b6f3eb8d73379cac3394ba 486 PANTHER PTHR41394:SF1 307 469 4.5E-31 T 20-04-2016 AMC99_RS07915 68c7b01097b6f3eb8d73379cac3394ba 486 Pfam PF00571 CBS domain 236 289 1.5E-4 T 20-04-2016 IPR000644 CBS domain AMC99_RS07915 68c7b01097b6f3eb8d73379cac3394ba 486 Pfam PF01769 Divalent cation transporter 354 475 1.6E-24 T 20-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AMC99_RS07915 68c7b01097b6f3eb8d73379cac3394ba 486 Pfam PF03448 MgtE intracellular N domain 68 169 1.1E-21 T 20-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain AMC99_RS07915 68c7b01097b6f3eb8d73379cac3394ba 486 PANTHER PTHR41394 307 469 4.5E-31 T 20-04-2016 AMC99_RS07915 68c7b01097b6f3eb8d73379cac3394ba 486 Gene3D G3DSA:3.10.580.10 164 295 4.1E-17 T 20-04-2016 AMC99_RS07915 68c7b01097b6f3eb8d73379cac3394ba 486 Gene3D G3DSA:1.10.357.20 311 478 6.8E-46 T 20-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AMC99_RS07915 68c7b01097b6f3eb8d73379cac3394ba 486 SUPERFAMILY SSF54631 170 302 5.68E-25 T 20-04-2016 AMC99_RS07915 68c7b01097b6f3eb8d73379cac3394ba 486 TIGRFAM TIGR00400 mgtE: magnesium transporter 50 478 5.3E-85 T 20-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AMC99_RS07915 68c7b01097b6f3eb8d73379cac3394ba 486 SUPERFAMILY SSF161093 310 478 2.48E-45 T 20-04-2016 AMC99_RS07915 68c7b01097b6f3eb8d73379cac3394ba 486 SMART SM00924 68 171 8.2E-30 T 20-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain AMC99_RS09720 225acca5bc4d8a1fada2efd8a1d3ee35 314 Pfam PF01479 S4 domain 16 59 1.3E-6 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS09720 225acca5bc4d8a1fada2efd8a1d3ee35 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 310 4.1E-98 T 20-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS09720 225acca5bc4d8a1fada2efd8a1d3ee35 314 Gene3D G3DSA:3.10.290.10 14 63 8.6E-14 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS09720 225acca5bc4d8a1fada2efd8a1d3ee35 314 PANTHER PTHR11079 16 311 5.6E-125 T 20-04-2016 AMC99_RS09720 225acca5bc4d8a1fada2efd8a1d3ee35 314 SMART SM00363 15 75 1.3E-7 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS09720 225acca5bc4d8a1fada2efd8a1d3ee35 314 SUPERFAMILY SSF55120 73 310 3.7E-78 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS09720 225acca5bc4d8a1fada2efd8a1d3ee35 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 20-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS09720 225acca5bc4d8a1fada2efd8a1d3ee35 314 SUPERFAMILY SSF55174 16 67 7.23E-10 T 20-04-2016 AMC99_RS09720 225acca5bc4d8a1fada2efd8a1d3ee35 314 Pfam PF00849 RNA pseudouridylate synthase 88 247 6.3E-37 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS09720 225acca5bc4d8a1fada2efd8a1d3ee35 314 PANTHER PTHR11079:SF73 16 311 5.6E-125 T 20-04-2016 AMC99_RS01760 f2c4be1d39d7e414a9c60bf37ed73468 228 PANTHER PTHR24567:SF28 54 227 6.9E-34 T 20-04-2016 AMC99_RS01760 f2c4be1d39d7e414a9c60bf37ed73468 228 SUPERFAMILY SSF46785 146 225 1.26E-17 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01760 f2c4be1d39d7e414a9c60bf37ed73468 228 PANTHER PTHR24567 54 227 6.9E-34 T 20-04-2016 AMC99_RS01760 f2c4be1d39d7e414a9c60bf37ed73468 228 Gene3D G3DSA:2.60.120.10 51 150 3.9E-6 T 20-04-2016 IPR014710 RmlC-like jelly roll fold AMC99_RS01760 f2c4be1d39d7e414a9c60bf37ed73468 228 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 174 190 5.3E-11 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_RS01760 f2c4be1d39d7e414a9c60bf37ed73468 228 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 190 205 5.3E-11 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_RS01760 f2c4be1d39d7e414a9c60bf37ed73468 228 SMART SM00419 168 217 4.9E-16 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_RS01760 f2c4be1d39d7e414a9c60bf37ed73468 228 Gene3D G3DSA:1.10.10.10 151 226 3.5E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01760 f2c4be1d39d7e414a9c60bf37ed73468 228 Pfam PF13545 Crp-like helix-turn-helix domain 149 223 3.5E-19 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_RS01760 f2c4be1d39d7e414a9c60bf37ed73468 228 SUPERFAMILY SSF51206 51 139 7.01E-7 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like AMC99_RS01760 f2c4be1d39d7e414a9c60bf37ed73468 228 ProSitePatterns PS00042 Crp-type HTH domain signature. 176 199 - T 20-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AMC99_RS02710 4e16ae408aad74ac34470047a30acd59 161 Gene3D G3DSA:3.30.420.140 23 156 4.6E-43 T 20-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 AMC99_RS02710 4e16ae408aad74ac34470047a30acd59 161 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 25 153 1.3E-33 T 20-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMC99_RS02710 4e16ae408aad74ac34470047a30acd59 161 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 22 157 21.67 T 20-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMC99_RS02710 4e16ae408aad74ac34470047a30acd59 161 SMART SM00732 22 122 5.1E-27 T 20-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 AMC99_RS02710 4e16ae408aad74ac34470047a30acd59 161 SUPERFAMILY SSF53098 23 155 3.79E-37 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS02710 4e16ae408aad74ac34470047a30acd59 161 Pfam PF03652 Holliday junction resolvase 24 154 2.2E-37 T 20-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMC99_RS02710 4e16ae408aad74ac34470047a30acd59 161 PANTHER PTHR33317 16 156 1.1E-35 T 20-04-2016 AMC99_RS06945 e86a17ef63c1e03965f9586554070dcd 208 PANTHER PTHR21299 1 207 5.2E-37 T 20-04-2016 AMC99_RS06945 e86a17ef63c1e03965f9586554070dcd 208 Pfam PF02224 Cytidylate kinase 3 201 1.1E-48 T 20-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AMC99_RS06945 e86a17ef63c1e03965f9586554070dcd 208 Gene3D G3DSA:3.40.50.300 1 204 2.3E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06945 e86a17ef63c1e03965f9586554070dcd 208 SUPERFAMILY SSF52540 1 204 8.34E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06945 e86a17ef63c1e03965f9586554070dcd 208 Hamap MF_00238 Cytidylate kinase [cmk]. 1 205 29.448 T 20-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AMC99_RS01095 088239eba6e8333bfa70ec9b08e9da93 221 Pfam PF13409 Glutathione S-transferase, N-terminal domain 11 79 1.4E-9 T 20-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_RS01095 088239eba6e8333bfa70ec9b08e9da93 221 PANTHER PTHR11260:SF144 3 207 7.7E-42 T 20-04-2016 AMC99_RS01095 088239eba6e8333bfa70ec9b08e9da93 221 Gene3D G3DSA:1.20.1050.10 99 210 3.1E-41 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS01095 088239eba6e8333bfa70ec9b08e9da93 221 Gene3D G3DSA:3.40.30.10 9 98 7.3E-16 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS01095 088239eba6e8333bfa70ec9b08e9da93 221 SUPERFAMILY SSF52833 2 89 6.73E-16 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS01095 088239eba6e8333bfa70ec9b08e9da93 221 SUPERFAMILY SSF47616 84 203 1.78E-15 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS01095 088239eba6e8333bfa70ec9b08e9da93 221 PANTHER PTHR11260 3 207 7.7E-42 T 20-04-2016 AMC99_RS04545 b8c6707d1143d5bd69a2adc2dceb6f28 315 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 146 3.5E-57 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS04545 b8c6707d1143d5bd69a2adc2dceb6f28 315 SUPERFAMILY SSF52096 4 315 1.49E-94 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS04545 b8c6707d1143d5bd69a2adc2dceb6f28 315 PANTHER PTHR22855:SF42 3 315 4.4E-112 T 20-04-2016 AMC99_RS04545 b8c6707d1143d5bd69a2adc2dceb6f28 315 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 47.451 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS04545 b8c6707d1143d5bd69a2adc2dceb6f28 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 2.9E-39 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS04545 b8c6707d1143d5bd69a2adc2dceb6f28 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 2.9E-39 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS04545 b8c6707d1143d5bd69a2adc2dceb6f28 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 2.9E-39 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS04545 b8c6707d1143d5bd69a2adc2dceb6f28 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 2.9E-39 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS04545 b8c6707d1143d5bd69a2adc2dceb6f28 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 2.9E-39 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS04545 b8c6707d1143d5bd69a2adc2dceb6f28 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 2.9E-39 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS04545 b8c6707d1143d5bd69a2adc2dceb6f28 315 PANTHER PTHR22855 3 315 4.4E-112 T 20-04-2016 AMC99_RS04545 b8c6707d1143d5bd69a2adc2dceb6f28 315 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 315 8.0E-124 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS04545 b8c6707d1143d5bd69a2adc2dceb6f28 315 Gene3D G3DSA:3.90.226.10 55 269 3.5E-45 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS01525 d621ad3c1ae5476e63769d6105bb8a59 248 SMART SM00419 179 227 9.7E-8 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_RS01525 d621ad3c1ae5476e63769d6105bb8a59 248 SMART SM00100 20 141 1.7E-4 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain AMC99_RS01525 d621ad3c1ae5476e63769d6105bb8a59 248 PANTHER PTHR24567 39 230 1.3E-32 T 20-04-2016 AMC99_RS01525 d621ad3c1ae5476e63769d6105bb8a59 248 Gene3D G3DSA:2.60.120.10 21 147 1.3E-16 T 20-04-2016 IPR014710 RmlC-like jelly roll fold AMC99_RS01525 d621ad3c1ae5476e63769d6105bb8a59 248 Pfam PF13545 Crp-like helix-turn-helix domain 163 230 1.2E-11 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_RS01525 d621ad3c1ae5476e63769d6105bb8a59 248 Gene3D G3DSA:1.10.10.10 156 236 1.5E-12 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01525 d621ad3c1ae5476e63769d6105bb8a59 248 Pfam PF00027 Cyclic nucleotide-binding domain 42 125 1.7E-15 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain AMC99_RS01525 d621ad3c1ae5476e63769d6105bb8a59 248 SUPERFAMILY SSF51206 13 153 2.36E-26 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like AMC99_RS01525 d621ad3c1ae5476e63769d6105bb8a59 248 SUPERFAMILY SSF46785 156 234 1.91E-12 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS04645 864e2cfac725b4d2800000e0b6128cef 408 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 408 143.418 T 20-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMC99_RS04645 864e2cfac725b4d2800000e0b6128cef 408 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 36 408 3.3E-111 T 20-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMC99_RS04645 864e2cfac725b4d2800000e0b6128cef 408 PANTHER PTHR23100:SF0 47 408 8.4E-156 T 20-04-2016 AMC99_RS04645 864e2cfac725b4d2800000e0b6128cef 408 SUPERFAMILY SSF56266 18 405 5.1E-133 T 20-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMC99_RS04645 864e2cfac725b4d2800000e0b6128cef 408 Pfam PF01960 ArgJ family 26 408 3.0E-134 T 20-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMC99_RS04645 864e2cfac725b4d2800000e0b6128cef 408 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 26 406 5.0E-149 T 20-04-2016 AMC99_RS04645 864e2cfac725b4d2800000e0b6128cef 408 PANTHER PTHR23100 47 408 8.4E-156 T 20-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMC99_RS04645 864e2cfac725b4d2800000e0b6128cef 408 Gene3D G3DSA:3.60.70.12 14 280 1.2E-87 T 20-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 1.1E-52 T 20-04-2016 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 PANTHER PTHR23115 405 603 0.0 T 20-04-2016 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 PANTHER PTHR23115 1 376 0.0 T 20-04-2016 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 Pfam PF06421 GTP-binding protein LepA C-terminus 495 600 4.6E-50 T 20-04-2016 IPR013842 GTP-binding protein LepA, C-terminal AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 TIGRFAM TIGR01393 lepA: elongation factor 4 6 602 3.9E-292 T 20-04-2016 IPR006297 Elongation factor 4 GO:0005525 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 PRINTS PR00315 GTP-binding elongation factor signature 93 104 5.9E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 PRINTS PR00315 GTP-binding elongation factor signature 77 87 5.9E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 PRINTS PR00315 GTP-binding elongation factor signature 9 22 5.9E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 PRINTS PR00315 GTP-binding elongation factor signature 129 138 5.9E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 PRINTS PR00315 GTP-binding elongation factor signature 52 60 5.9E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 Pfam PF00679 Elongation factor G C-terminus 407 492 5.4E-19 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 SUPERFAMILY SSF54980 295 373 9.35E-19 T 20-04-2016 IPR009022 Elongation factor G, III-V domain AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 SUPERFAMILY SSF52540 1 227 2.97E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 Pfam PF03144 Elongation factor Tu domain 2 208 278 1.1E-8 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 179 4.9E-20 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 Gene3D G3DSA:2.40.30.10 196 293 4.8E-21 T 20-04-2016 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 Gene3D G3DSA:3.30.70.870 294 372 9.0E-27 T 20-04-2016 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 SUPERFAMILY SSF54980 407 501 2.06E-24 T 20-04-2016 IPR009022 Elongation factor G, III-V domain AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 Gene3D G3DSA:3.40.50.300 2 195 4.5E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 Hamap MF_00071 Elongation factor 4 [lepA]. 1 605 303.281 T 20-04-2016 IPR006297 Elongation factor 4 GO:0005525 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 Gene3D G3DSA:3.30.70.240 409 497 2.0E-20 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 PANTHER PTHR23115:SF175 405 603 0.0 T 20-04-2016 AMC99_RS06695 526de5e64d207ea737ad21bd96e2cf62 605 PANTHER PTHR23115:SF175 1 376 0.0 T 20-04-2016 AMC99_RS02185 b92a54bd0a0466d83370d8a659168b58 468 PANTHER PTHR10283:SF82 1 458 5.2E-121 T 20-04-2016 AMC99_RS02185 b92a54bd0a0466d83370d8a659168b58 468 PANTHER PTHR10283 1 458 5.2E-121 T 20-04-2016 AMC99_RS02185 b92a54bd0a0466d83370d8a659168b58 468 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 17 462 2.9E-75 T 20-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMC99_RS02185 b92a54bd0a0466d83370d8a659168b58 468 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 460 1.7E-72 T 20-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMC99_RS06705 a4f5b8694050c00d28b6f4116bab64c4 696 SUPERFAMILY SSF55073 155 313 1.33E-41 T 20-04-2016 IPR029787 Nucleotide cyclase AMC99_RS06705 a4f5b8694050c00d28b6f4116bab64c4 696 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 148 309 1.3E-32 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS06705 a4f5b8694050c00d28b6f4116bab64c4 696 SUPERFAMILY SSF55785 31 137 7.96E-10 T 20-04-2016 IPR000014 PAS domain AMC99_RS06705 a4f5b8694050c00d28b6f4116bab64c4 696 Gene3D G3DSA:3.20.20.450 324 570 1.9E-91 T 20-04-2016 IPR001633 EAL domain AMC99_RS06705 a4f5b8694050c00d28b6f4116bab64c4 696 SMART SM00052 321 564 2.7E-101 T 20-04-2016 IPR001633 EAL domain AMC99_RS06705 a4f5b8694050c00d28b6f4116bab64c4 696 Pfam PF00563 EAL domain 327 557 1.6E-74 T 20-04-2016 IPR001633 EAL domain AMC99_RS06705 a4f5b8694050c00d28b6f4116bab64c4 696 Pfam PF08448 PAS fold 34 141 1.4E-6 T 20-04-2016 IPR013656 PAS fold-4 AMC99_RS06705 a4f5b8694050c00d28b6f4116bab64c4 696 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 306 1.0E-38 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS06705 a4f5b8694050c00d28b6f4116bab64c4 696 SUPERFAMILY SSF141868 326 569 1.29E-85 T 20-04-2016 IPR001633 EAL domain AMC99_RS06705 a4f5b8694050c00d28b6f4116bab64c4 696 Gene3D G3DSA:3.30.70.270 152 317 7.9E-46 T 20-04-2016 AMC99_RS06705 a4f5b8694050c00d28b6f4116bab64c4 696 SMART SM00267 139 311 2.5E-45 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS06705 a4f5b8694050c00d28b6f4116bab64c4 696 Gene3D G3DSA:3.30.450.20 31 137 1.8E-10 T 20-04-2016 AMC99_RS06705 a4f5b8694050c00d28b6f4116bab64c4 696 PANTHER PTHR33121 299 595 3.0E-81 T 20-04-2016 AMC99_RS06705 a4f5b8694050c00d28b6f4116bab64c4 696 PANTHER PTHR33121:SF13 299 595 3.0E-81 T 20-04-2016 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 SUPERFAMILY SSF52016 631 888 2.94E-88 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 20 888 0.0 T 20-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 SUPERFAMILY SSF53732 8 626 1.57E-220 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 Gene3D G3DSA:3.40.1060.10 254 371 1.9E-35 T 20-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 207 220 2.0E-43 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 431 442 2.0E-43 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 149 162 2.0E-43 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 297 310 2.0E-43 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 173 181 2.0E-43 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 283 296 2.0E-43 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 493 506 2.0E-43 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 376 390 2.0E-43 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 221 236 2.0E-43 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PANTHER PTHR11670 749 891 0.0 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PANTHER PTHR11670 416 651 0.0 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PANTHER PTHR11670 12 397 0.0 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PANTHER PTHR11670 667 712 0.0 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PANTHER PTHR11670:SF1 749 891 0.0 T 20-04-2016 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PANTHER PTHR11670:SF1 416 651 0.0 T 20-04-2016 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PANTHER PTHR11670:SF1 12 397 0.0 T 20-04-2016 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 PANTHER PTHR11670:SF1 667 712 0.0 T 20-04-2016 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 20-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 Gene3D G3DSA:3.30.499.10 24 253 2.5E-77 T 20-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 Pfam PF00330 Aconitase family (aconitate hydratase) 72 562 1.5E-184 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 Pfam PF00694 Aconitase C-terminal domain 692 816 2.9E-44 T 20-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 Gene3D G3DSA:3.30.499.10 373 575 1.4E-60 T 20-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 Gene3D G3DSA:3.20.19.10 638 888 6.3E-80 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMC99_RS01335 0f07da1cd3b4fb31fc974b1e469e9910 891 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 20-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08695 33a1b9c5615f42cfef9f001ec3125f38 267 PANTHER PTHR12029 1 262 6.2E-64 T 20-04-2016 AMC99_RS08695 33a1b9c5615f42cfef9f001ec3125f38 267 Gene3D G3DSA:3.40.1280.10 115 263 3.5E-42 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMC99_RS08695 33a1b9c5615f42cfef9f001ec3125f38 267 Pfam PF00588 SpoU rRNA Methylase family 121 259 2.0E-29 T 20-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMC99_RS08695 33a1b9c5615f42cfef9f001ec3125f38 267 SMART SM00967 33 109 1.2E-8 T 20-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AMC99_RS08695 33a1b9c5615f42cfef9f001ec3125f38 267 Gene3D G3DSA:3.30.1330.30 6 104 2.9E-22 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like AMC99_RS08695 33a1b9c5615f42cfef9f001ec3125f38 267 SUPERFAMILY SSF75217 110 262 6.28E-38 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases AMC99_RS08695 33a1b9c5615f42cfef9f001ec3125f38 267 SUPERFAMILY SSF55315 5 106 1.48E-21 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like AMC99_RS08695 33a1b9c5615f42cfef9f001ec3125f38 267 PANTHER PTHR12029:SF61 1 262 6.2E-64 T 20-04-2016 AMC99_RS12525 fd7ed5c769bd7bef03f85deb5a94cca9 882 Gene3D G3DSA:3.40.50.300 14 136 8.0E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12525 fd7ed5c769bd7bef03f85deb5a94cca9 882 SUPERFAMILY SSF52540 146 390 2.45E-33 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12525 fd7ed5c769bd7bef03f85deb5a94cca9 882 PANTHER PTHR12131 15 279 2.1E-97 T 20-04-2016 AMC99_RS12525 fd7ed5c769bd7bef03f85deb5a94cca9 882 Gene3D G3DSA:3.40.50.300 173 275 1.8E-16 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12525 fd7ed5c769bd7bef03f85deb5a94cca9 882 SMART SM00490 182 271 4.5E-17 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS12525 fd7ed5c769bd7bef03f85deb5a94cca9 882 SUPERFAMILY SSF52540 13 140 1.06E-8 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12525 fd7ed5c769bd7bef03f85deb5a94cca9 882 PANTHER PTHR12131:SF4 15 279 2.1E-97 T 20-04-2016 AMC99_RS12525 fd7ed5c769bd7bef03f85deb5a94cca9 882 Pfam PF00271 Helicase conserved C-terminal domain 175 270 3.2E-10 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 575 592 - T 20-04-2016 IPR001882 Biotin-binding site AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 SUPERFAMILY SSF52440 1 113 2.52E-48 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 Pfam PF02785 Biotin carboxylase C-terminal domain 341 445 2.2E-28 T 20-04-2016 IPR005482 Biotin carboxylase, C-terminal AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 SUPERFAMILY SSF51246 336 451 1.57E-31 T 20-04-2016 IPR011054 Rudiment single hybrid motif AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.4E-45 T 20-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 Gene3D G3DSA:3.30.470.20 203 453 2.6E-97 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 SUPERFAMILY SSF51230 548 619 6.94E-21 T 20-04-2016 IPR011053 Single hybrid motif AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 Gene3D G3DSA:3.30.1490.20 130 201 2.9E-29 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 Gene3D G3DSA:3.40.50.20 1 129 1.8E-51 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 Gene3D G3DSA:2.40.50.100 551 619 3.2E-24 T 20-04-2016 AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 SMART SM00878 341 445 1.3E-42 T 20-04-2016 IPR005482 Biotin carboxylase, C-terminal AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 Pfam PF00364 Biotin-requiring enzyme 553 617 1.6E-16 T 20-04-2016 IPR000089 Biotin/lipoyl attachment AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 SUPERFAMILY SSF56059 83 351 1.48E-67 T 20-04-2016 AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 PANTHER PTHR18866 1 623 2.7E-302 T 20-04-2016 AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_RS01830 ce0feb2b1ebd72988f566525671e6b1e 623 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 327 6.1E-73 T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_RS06365 2704a3da94809d52758c01dae242b55a 398 SUPERFAMILY SSF53335 45 395 1.62E-39 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS06365 2704a3da94809d52758c01dae242b55a 398 Gene3D G3DSA:3.40.50.150 209 398 5.9E-32 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS06365 2704a3da94809d52758c01dae242b55a 398 PANTHER PTHR11061 22 398 8.8E-35 T 20-04-2016 AMC99_RS06365 2704a3da94809d52758c01dae242b55a 398 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 323 393 8.3E-9 T 20-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AMC99_RS06365 2704a3da94809d52758c01dae242b55a 398 PANTHER PTHR11061:SF30 22 398 8.8E-35 T 20-04-2016 AMC99_RS06365 2704a3da94809d52758c01dae242b55a 398 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 330 360 - T 20-04-2016 IPR030390 RNA methyltransferase TrmA, active site AMC99_RS03970 38269d949876f3732c435e295350f7bd 225 SUPERFAMILY SSF69618 4 224 1.57E-24 T 20-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS03970 38269d949876f3732c435e295350f7bd 225 Pfam PF02602 Uroporphyrinogen-III synthase HemD 17 214 1.4E-14 T 20-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS03970 38269d949876f3732c435e295350f7bd 225 Gene3D G3DSA:3.40.50.10090 41 95 6.4E-6 T 20-04-2016 AMC99_RS01470 ced9eec623cc2a462058618471c775e3 294 SUPERFAMILY SSF102405 46 92 1.98E-49 T 20-04-2016 AMC99_RS01470 ced9eec623cc2a462058618471c775e3 294 SUPERFAMILY SSF102405 120 285 1.98E-49 T 20-04-2016 AMC99_RS01470 ced9eec623cc2a462058618471c775e3 294 PANTHER PTHR31223 120 291 6.8E-59 T 20-04-2016 AMC99_RS01470 ced9eec623cc2a462058618471c775e3 294 Pfam PF03641 Possible lysine decarboxylase 156 283 3.7E-32 T 20-04-2016 IPR031100 LOG family AMC99_RS01470 ced9eec623cc2a462058618471c775e3 294 Gene3D G3DSA:3.40.50.450 58 291 3.5E-61 T 20-04-2016 AMC99_RS01470 ced9eec623cc2a462058618471c775e3 294 PANTHER PTHR31223:SF1 120 291 6.8E-59 T 20-04-2016 AMC99_RS06215 e7e68ee4721c78567c97a7b7b005a859 294 SUPERFAMILY SSF53187 64 160 7.53E-46 T 20-04-2016 AMC99_RS06215 e7e68ee4721c78567c97a7b7b005a859 294 SUPERFAMILY SSF53187 207 283 7.53E-46 T 20-04-2016 AMC99_RS06215 e7e68ee4721c78567c97a7b7b005a859 294 PANTHER PTHR30404:SF0 63 287 5.0E-65 T 20-04-2016 AMC99_RS06215 e7e68ee4721c78567c97a7b7b005a859 294 Gene3D G3DSA:3.40.630.40 65 161 3.5E-50 T 20-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMC99_RS06215 e7e68ee4721c78567c97a7b7b005a859 294 Gene3D G3DSA:3.40.630.40 208 283 3.5E-50 T 20-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMC99_RS06215 e7e68ee4721c78567c97a7b7b005a859 294 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 66 279 3.1E-44 T 20-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMC99_RS06215 e7e68ee4721c78567c97a7b7b005a859 294 SMART SM00646 125 280 9.0E-37 T 20-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMC99_RS06215 e7e68ee4721c78567c97a7b7b005a859 294 PANTHER PTHR30404 63 287 5.0E-65 T 20-04-2016 AMC99_RS06275 77a05ce37637c170469bcd952950d7c8 232 Gene3D G3DSA:2.60.120.10 7 231 1.5E-62 T 20-04-2016 IPR014710 RmlC-like jelly roll fold AMC99_RS06275 77a05ce37637c170469bcd952950d7c8 232 PANTHER PTHR13903 1 230 2.5E-94 T 20-04-2016 IPR012093 Pirin AMC99_RS06275 77a05ce37637c170469bcd952950d7c8 232 SUPERFAMILY SSF51182 1 231 6.0E-69 T 20-04-2016 IPR011051 RmlC-like cupin domain AMC99_RS06275 77a05ce37637c170469bcd952950d7c8 232 PIRSF PIRSF006232 3 232 2.5E-47 T 20-04-2016 IPR012093 Pirin AMC99_RS06275 77a05ce37637c170469bcd952950d7c8 232 PANTHER PTHR13903:SF7 1 230 2.5E-94 T 20-04-2016 AMC99_RS06275 77a05ce37637c170469bcd952950d7c8 232 Pfam PF02678 Pirin 14 118 1.8E-34 T 20-04-2016 IPR003829 Pirin, N-terminal domain AMC99_RS12620 1f395836081187ad4ab3e10de4d68a23 431 PIRSF PIRSF000151 14 431 3.2E-161 T 20-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMC99_RS12620 1f395836081187ad4ab3e10de4d68a23 431 Gene3D G3DSA:3.40.605.10 13 240 1.2E-97 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS12620 1f395836081187ad4ab3e10de4d68a23 431 Gene3D G3DSA:3.40.605.10 389 430 1.2E-97 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS12620 1f395836081187ad4ab3e10de4d68a23 431 Pfam PF00171 Aldehyde dehydrogenase family 17 285 2.7E-9 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS12620 1f395836081187ad4ab3e10de4d68a23 431 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 30 420 1.4E-134 T 20-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMC99_RS12620 1f395836081187ad4ab3e10de4d68a23 431 SUPERFAMILY SSF53720 21 430 1.31E-105 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMC99_RS12620 1f395836081187ad4ab3e10de4d68a23 431 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 337 358 - T 20-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMC99_RS12620 1f395836081187ad4ab3e10de4d68a23 431 PANTHER PTHR11063 11 430 5.6E-168 T 20-04-2016 AMC99_RS12620 1f395836081187ad4ab3e10de4d68a23 431 PANTHER PTHR11063:SF8 11 430 5.6E-168 T 20-04-2016 AMC99_RS12620 1f395836081187ad4ab3e10de4d68a23 431 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 21 430 38.864 T 20-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMC99_RS12620 1f395836081187ad4ab3e10de4d68a23 431 Gene3D G3DSA:3.40.309.10 242 388 9.8E-31 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMC99_RS01695 bc324a4164e729a737e7b4e2fe5c7847 128 Gene3D G3DSA:3.30.1330.40 4 127 1.8E-37 T 20-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMC99_RS01695 bc324a4164e729a737e7b4e2fe5c7847 128 PANTHER PTHR11803:SF7 9 127 1.0E-30 T 20-04-2016 AMC99_RS01695 bc324a4164e729a737e7b4e2fe5c7847 128 PANTHER PTHR11803 9 127 1.0E-30 T 20-04-2016 IPR006175 YjgF/YER057c/UK114 family AMC99_RS01695 bc324a4164e729a737e7b4e2fe5c7847 128 SUPERFAMILY SSF55298 4 127 5.34E-33 T 20-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMC99_RS01695 bc324a4164e729a737e7b4e2fe5c7847 128 Pfam PF01042 Endoribonuclease L-PSP 18 126 3.1E-23 T 20-04-2016 IPR006175 YjgF/YER057c/UK114 family AMC99_RS07510 f283d4da00f341484df458225c595699 144 SUPERFAMILY SSF54686 1 134 9.81E-56 T 20-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07510 f283d4da00f341484df458225c595699 144 Gene3D G3DSA:3.90.1170.10 23 134 3.4E-52 T 20-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07510 f283d4da00f341484df458225c595699 144 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 3.7E-56 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMC99_RS07510 f283d4da00f341484df458225c595699 144 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.7E-38 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMC99_RS07510 f283d4da00f341484df458225c595699 144 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.7E-38 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMC99_RS07510 f283d4da00f341484df458225c595699 144 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.7E-38 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMC99_RS07510 f283d4da00f341484df458225c595699 144 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.7E-38 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMC99_RS07510 f283d4da00f341484df458225c595699 144 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.69 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMC99_RS07510 f283d4da00f341484df458225c595699 144 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 20-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07510 f283d4da00f341484df458225c595699 144 PANTHER PTHR12220 1 134 4.5E-67 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMC99_RS07510 f283d4da00f341484df458225c595699 144 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.4E-48 T 20-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMC99_RS00640 f96ecf215b9da27ad3996c48632474a7 231 PANTHER PTHR24567 9 221 9.6E-23 T 20-04-2016 AMC99_RS00640 f96ecf215b9da27ad3996c48632474a7 231 SUPERFAMILY SSF51206 9 144 9.3E-21 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like AMC99_RS00640 f96ecf215b9da27ad3996c48632474a7 231 Pfam PF00027 Cyclic nucleotide-binding domain 33 118 2.0E-12 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain AMC99_RS00640 f96ecf215b9da27ad3996c48632474a7 231 Gene3D G3DSA:2.60.120.10 11 144 1.9E-17 T 20-04-2016 IPR014710 RmlC-like jelly roll fold AMC99_RS00640 f96ecf215b9da27ad3996c48632474a7 231 Pfam PF13545 Crp-like helix-turn-helix domain 151 218 5.5E-12 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_RS00640 f96ecf215b9da27ad3996c48632474a7 231 SUPERFAMILY SSF46785 150 221 6.05E-7 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS00640 f96ecf215b9da27ad3996c48632474a7 231 Gene3D G3DSA:1.10.10.10 151 220 4.0E-11 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS00640 f96ecf215b9da27ad3996c48632474a7 231 SMART SM00100 14 131 2.5E-8 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain AMC99_RS08690 769bfd1355ad0b7cdb96ea3cf0e68925 92 Pfam PF00381 PTS HPr component phosphorylation site 5 86 2.3E-22 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like AMC99_RS08690 769bfd1355ad0b7cdb96ea3cf0e68925 92 PANTHER PTHR33705 1 92 9.7E-28 T 20-04-2016 AMC99_RS08690 769bfd1355ad0b7cdb96ea3cf0e68925 92 PRINTS PR00107 Phosphocarrier protein signature 57 74 1.9E-8 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like AMC99_RS08690 769bfd1355ad0b7cdb96ea3cf0e68925 92 PRINTS PR00107 Phosphocarrier protein signature 42 57 1.9E-8 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like AMC99_RS08690 769bfd1355ad0b7cdb96ea3cf0e68925 92 PRINTS PR00107 Phosphocarrier protein signature 15 31 1.9E-8 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like AMC99_RS08690 769bfd1355ad0b7cdb96ea3cf0e68925 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 20-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AMC99_RS08690 769bfd1355ad0b7cdb96ea3cf0e68925 92 SUPERFAMILY SSF55594 5 92 3.01E-22 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like AMC99_RS08690 769bfd1355ad0b7cdb96ea3cf0e68925 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 5 85 1.1E-21 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like AMC99_RS08690 769bfd1355ad0b7cdb96ea3cf0e68925 92 PANTHER PTHR33705:SF2 1 92 9.7E-28 T 20-04-2016 AMC99_RS08690 769bfd1355ad0b7cdb96ea3cf0e68925 92 Gene3D G3DSA:3.30.1340.10 4 92 1.2E-24 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like AMC99_RS01515 92138f9dfb9072c933fc5886a733bfb7 531 Pfam PF03924 CHASE domain 62 240 4.4E-44 T 20-04-2016 IPR006189 CHASE domain AMC99_RS01515 92138f9dfb9072c933fc5886a733bfb7 531 Pfam PF07536 HWE histidine kinase 328 410 7.6E-25 T 20-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_RS01515 92138f9dfb9072c933fc5886a733bfb7 531 PANTHER PTHR41523 1 520 8.8E-36 T 20-04-2016 AMC99_RS01515 92138f9dfb9072c933fc5886a733bfb7 531 SMART SM00911 328 410 3.1E-34 T 20-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_RS01515 92138f9dfb9072c933fc5886a733bfb7 531 SMART SM01079 59 243 7.4E-54 T 20-04-2016 IPR006189 CHASE domain AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 Gene3D G3DSA:2.20.25.90 22 79 3.1E-21 T 20-04-2016 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 SMART SM00926 21 75 6.7E-20 T 20-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 Gene3D G3DSA:3.40.50.740 80 155 1.7E-32 T 20-04-2016 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 Gene3D G3DSA:3.40.50.740 485 626 1.7E-32 T 20-04-2016 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 Gene3D G3DSA:3.40.228.10 156 274 9.3E-49 T 20-04-2016 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 Gene3D G3DSA:3.40.228.10 326 430 9.3E-49 T 20-04-2016 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 SUPERFAMILY SSF50692 772 923 3.62E-29 T 20-04-2016 IPR009010 Aspartate decarboxylase-like domain AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 Pfam PF00384 Molybdopterin oxidoreductase 79 594 2.0E-23 T 20-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 Pfam PF01568 Molydopterin dinucleotide binding domain 784 860 7.8E-10 T 20-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 PANTHER PTHR11615:SF164 349 429 1.2E-120 T 20-04-2016 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 PANTHER PTHR11615:SF164 18 284 1.2E-120 T 20-04-2016 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 PANTHER PTHR11615:SF164 445 655 1.2E-120 T 20-04-2016 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 PANTHER PTHR11615:SF164 705 935 1.2E-120 T 20-04-2016 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 SUPERFAMILY SSF53706 20 744 5.37E-130 T 20-04-2016 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 Gene3D G3DSA:2.40.40.20 757 920 5.2E-38 T 20-04-2016 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 PANTHER PTHR11615 349 429 1.2E-120 T 20-04-2016 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 PANTHER PTHR11615 18 284 1.2E-120 T 20-04-2016 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 PANTHER PTHR11615 445 655 1.2E-120 T 20-04-2016 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 PANTHER PTHR11615 705 935 1.2E-120 T 20-04-2016 AMC99_RS03840 f26766f9f0b0db992fc42f604992ee12 991 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 23 74 3.0E-16 T 20-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMC99_RS10410 fe9ff5d8a732ec43ab292ce679f02884 172 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 172 1.6E-45 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AMC99_RS10410 fe9ff5d8a732ec43ab292ce679f02884 172 PANTHER PTHR10302 1 108 1.3E-42 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AMC99_RS10410 fe9ff5d8a732ec43ab292ce679f02884 172 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 34.356 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AMC99_RS10410 fe9ff5d8a732ec43ab292ce679f02884 172 SUPERFAMILY SSF50249 4 172 4.46E-52 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS10410 fe9ff5d8a732ec43ab292ce679f02884 172 PANTHER PTHR10302:SF0 1 108 1.3E-42 T 20-04-2016 AMC99_RS10410 fe9ff5d8a732ec43ab292ce679f02884 172 Gene3D G3DSA:2.40.50.140 2 172 1.0E-49 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS10410 fe9ff5d8a732ec43ab292ce679f02884 172 Pfam PF00436 Single-strand binding protein family 5 105 6.6E-37 T 20-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 AMC99_RS08130 e588d7e0a0dcb42e4285327a05fe0490 485 Gene3D G3DSA:2.40.10.170 7 82 4.9E-34 T 20-04-2016 AMC99_RS08130 e588d7e0a0dcb42e4285327a05fe0490 485 Gene3D G3DSA:1.10.1140.10 366 484 7.6E-58 T 20-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08130 e588d7e0a0dcb42e4285327a05fe0490 485 SUPERFAMILY SSF52540 85 368 1.86E-87 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08130 e588d7e0a0dcb42e4285327a05fe0490 485 PANTHER PTHR15184:SF8 8 485 0.0 T 20-04-2016 AMC99_RS08130 e588d7e0a0dcb42e4285327a05fe0490 485 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 12 481 1.3E-251 T 20-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08130 e588d7e0a0dcb42e4285327a05fe0490 485 Gene3D G3DSA:3.40.50.300 84 365 2.4E-108 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08130 e588d7e0a0dcb42e4285327a05fe0490 485 Hamap MF_01347 ATP synthase subunit beta [atpB]. 10 481 57.221 T 20-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08130 e588d7e0a0dcb42e4285327a05fe0490 485 PANTHER PTHR15184 8 485 0.0 T 20-04-2016 AMC99_RS08130 e588d7e0a0dcb42e4285327a05fe0490 485 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 138 363 3.9E-61 T 20-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08130 e588d7e0a0dcb42e4285327a05fe0490 485 SUPERFAMILY SSF47917 366 482 6.02E-54 T 20-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08130 e588d7e0a0dcb42e4285327a05fe0490 485 PIRSF PIRSF039072 1 485 1.6E-281 T 20-04-2016 AMC99_RS08130 e588d7e0a0dcb42e4285327a05fe0490 485 SMART SM00382 150 426 5.0E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS08130 e588d7e0a0dcb42e4285327a05fe0490 485 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 354 363 - T 20-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08130 e588d7e0a0dcb42e4285327a05fe0490 485 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 15 81 3.5E-22 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08130 e588d7e0a0dcb42e4285327a05fe0490 485 SUPERFAMILY SSF50615 9 82 1.15E-23 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS02485 93c0b9620b67517f57139338d5c26b97 592 Pfam PF00474 Sodium:solute symporter family 398 513 4.3E-15 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMC99_RS02485 93c0b9620b67517f57139338d5c26b97 592 Pfam PF00474 Sodium:solute symporter family 33 302 1.7E-35 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMC99_RS02485 93c0b9620b67517f57139338d5c26b97 592 PANTHER PTHR11819:SF159 356 589 1.5E-217 T 20-04-2016 AMC99_RS02485 93c0b9620b67517f57139338d5c26b97 592 PANTHER PTHR11819:SF159 4 308 1.5E-217 T 20-04-2016 AMC99_RS02485 93c0b9620b67517f57139338d5c26b97 592 PANTHER PTHR11819 356 589 1.5E-217 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMC99_RS02485 93c0b9620b67517f57139338d5c26b97 592 PANTHER PTHR11819 4 308 1.5E-217 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMC99_RS02485 93c0b9620b67517f57139338d5c26b97 592 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 495 515 - T 20-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AMC99_RS02485 93c0b9620b67517f57139338d5c26b97 592 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 583 7.2E-260 T 20-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily AMC99_RS00375 c3ab989e30472182425f64daee5f7fb1 290 Gene3D G3DSA:3.40.30.10 157 285 2.2E-25 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS00375 c3ab989e30472182425f64daee5f7fb1 290 Pfam PF13098 Thioredoxin-like domain 167 278 3.9E-12 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS00375 c3ab989e30472182425f64daee5f7fb1 290 SUPERFAMILY SSF54423 48 105 2.55E-10 T 20-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AMC99_RS00375 c3ab989e30472182425f64daee5f7fb1 290 SUPERFAMILY SSF52833 145 284 3.16E-25 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS00375 c3ab989e30472182425f64daee5f7fb1 290 Pfam PF10411 Disulfide bond isomerase protein N-terminus 51 103 2.3E-14 T 20-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AMC99_RS00375 c3ab989e30472182425f64daee5f7fb1 290 Gene3D G3DSA:3.10.450.70 54 107 3.3E-7 T 20-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal AMC99_RS00375 c3ab989e30472182425f64daee5f7fb1 290 PANTHER PTHR35272 19 114 4.3E-12 T 20-04-2016 AMC99_RS00375 c3ab989e30472182425f64daee5f7fb1 290 PANTHER PTHR35272 140 282 4.3E-12 T 20-04-2016 AMC99_RS07490 ea6fb445c0ecc8889f3aa44edd4fd247 106 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 104 2.2E-33 T 20-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07490 ea6fb445c0ecc8889f3aa44edd4fd247 106 Pfam PF00467 KOW motif 8 39 3.1E-8 T 20-04-2016 IPR005824 KOW AMC99_RS07490 ea6fb445c0ecc8889f3aa44edd4fd247 106 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 41 104 1.5E-21 T 20-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07490 ea6fb445c0ecc8889f3aa44edd4fd247 106 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 99 18.832 T 20-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07490 ea6fb445c0ecc8889f3aa44edd4fd247 106 Gene3D G3DSA:2.30.30.30 3 93 4.6E-23 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 AMC99_RS07490 ea6fb445c0ecc8889f3aa44edd4fd247 106 ProSitePatterns PS01108 Ribosomal protein L24 signature. 9 26 - T 20-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07490 ea6fb445c0ecc8889f3aa44edd4fd247 106 SMART SM00739 5 32 8.6E-7 T 20-04-2016 IPR005824 KOW AMC99_RS07490 ea6fb445c0ecc8889f3aa44edd4fd247 106 PANTHER PTHR12903 1 105 1.6E-38 T 20-04-2016 AMC99_RS07490 ea6fb445c0ecc8889f3aa44edd4fd247 106 SUPERFAMILY SSF50104 3 102 4.89E-34 T 20-04-2016 IPR008991 Translation protein SH3-like domain AMC99_RS05670 f921c32bcda062f7dc0e645e09a9d4da 514 PANTHER PTHR11451 1 488 9.1E-179 T 20-04-2016 AMC99_RS05670 f921c32bcda062f7dc0e645e09a9d4da 514 SMART SM00946 440 514 1.4E-11 T 20-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMC99_RS05670 f921c32bcda062f7dc0e645e09a9d4da 514 Gene3D G3DSA:3.40.50.800 298 430 4.9E-27 T 20-04-2016 IPR004154 Anticodon-binding AMC99_RS05670 f921c32bcda062f7dc0e645e09a9d4da 514 SUPERFAMILY SSF64586 437 514 1.0E-9 T 20-04-2016 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMC99_RS05670 f921c32bcda062f7dc0e645e09a9d4da 514 PANTHER PTHR11451:SF6 1 488 9.1E-179 T 20-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMC99_RS05670 f921c32bcda062f7dc0e645e09a9d4da 514 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 10 514 4.3E-135 T 20-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMC99_RS05670 f921c32bcda062f7dc0e645e09a9d4da 514 Gene3D G3DSA:3.30.930.10 8 297 7.8E-105 T 20-04-2016 AMC99_RS05670 f921c32bcda062f7dc0e645e09a9d4da 514 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 118 284 1.7E-11 T 20-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS05670 f921c32bcda062f7dc0e645e09a9d4da 514 Pfam PF03129 Anticodon binding domain 304 387 9.3E-10 T 20-04-2016 IPR004154 Anticodon-binding AMC99_RS05670 f921c32bcda062f7dc0e645e09a9d4da 514 Hamap MF_01571 Proline--tRNA ligase [proS]. 9 514 39.648 T 20-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMC99_RS05670 f921c32bcda062f7dc0e645e09a9d4da 514 SUPERFAMILY SSF55681 13 291 1.39E-70 T 20-04-2016 AMC99_RS05670 f921c32bcda062f7dc0e645e09a9d4da 514 Gene3D G3DSA:3.30.110.30 435 513 5.6E-10 T 20-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMC99_RS05670 f921c32bcda062f7dc0e645e09a9d4da 514 SUPERFAMILY SSF52954 293 430 9.65E-22 T 20-04-2016 IPR004154 Anticodon-binding AMC99_RS10375 4084b07a4561d1eb4e4ca776943a3dfa 497 PANTHER PTHR11814:SF76 8 491 1.4E-246 T 20-04-2016 AMC99_RS10375 4084b07a4561d1eb4e4ca776943a3dfa 497 Gene3D G3DSA:3.30.750.24 392 485 7.4E-12 T 20-04-2016 IPR002645 STAS domain AMC99_RS10375 4084b07a4561d1eb4e4ca776943a3dfa 497 Pfam PF00916 Sulfate permease family 142 342 2.3E-27 T 20-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AMC99_RS10375 4084b07a4561d1eb4e4ca776943a3dfa 497 Pfam PF01740 STAS domain 394 486 1.8E-10 T 20-04-2016 IPR002645 STAS domain AMC99_RS10375 4084b07a4561d1eb4e4ca776943a3dfa 497 PANTHER PTHR11814 8 491 1.4E-246 T 20-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 AMC99_RS10375 4084b07a4561d1eb4e4ca776943a3dfa 497 SUPERFAMILY SSF52091 387 486 2.55E-14 T 20-04-2016 IPR002645 STAS domain AMC99_RS07355 97a138de0314a6508058c65bb659b01a 948 Gene3D G3DSA:3.40.50.970 611 781 1.4E-22 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS07355 97a138de0314a6508058c65bb659b01a 948 Pfam PF02779 Transketolase, pyrimidine binding domain 587 779 7.5E-66 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_RS07355 97a138de0314a6508058c65bb659b01a 948 SUPERFAMILY SSF52518 120 528 7.23E-87 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS07355 97a138de0314a6508058c65bb659b01a 948 PANTHER PTHR23152 64 938 0.0 T 20-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMC99_RS07355 97a138de0314a6508058c65bb659b01a 948 PIRSF PIRSF000157 23 931 0.0 T 20-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMC99_RS07355 97a138de0314a6508058c65bb659b01a 948 Gene3D G3DSA:3.40.50.970 147 530 6.1E-76 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS07355 97a138de0314a6508058c65bb659b01a 948 SMART SM00861 587 778 6.9E-58 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_RS07355 97a138de0314a6508058c65bb659b01a 948 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 783 929 1.4E-47 T 20-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMC99_RS07355 97a138de0314a6508058c65bb659b01a 948 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 62 927 0.0 T 20-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMC99_RS07355 97a138de0314a6508058c65bb659b01a 948 SUPERFAMILY SSF52518 570 785 7.26E-52 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS07355 97a138de0314a6508058c65bb659b01a 948 Pfam PF00676 Dehydrogenase E1 component 200 514 3.0E-56 T 20-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 AMC99_RS05300 667c9f0a359fa764db2735dc1064b072 416 PANTHER PTHR21327:SF6 44 415 5.2E-130 T 20-04-2016 AMC99_RS05300 667c9f0a359fa764db2735dc1064b072 416 Pfam PF00925 GTP cyclohydrolase II 270 355 5.8E-13 T 20-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMC99_RS05300 667c9f0a359fa764db2735dc1064b072 416 Pfam PF00925 GTP cyclohydrolase II 363 413 8.3E-10 T 20-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMC99_RS05300 667c9f0a359fa764db2735dc1064b072 416 SUPERFAMILY SSF142695 266 415 5.1E-37 T 20-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMC99_RS05300 667c9f0a359fa764db2735dc1064b072 416 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 68 261 8.4E-71 T 20-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMC99_RS05300 667c9f0a359fa764db2735dc1064b072 416 SUPERFAMILY SSF55821 64 264 3.43E-84 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMC99_RS05300 667c9f0a359fa764db2735dc1064b072 416 Gene3D G3DSA:3.90.870.10 66 273 4.9E-95 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMC99_RS05300 667c9f0a359fa764db2735dc1064b072 416 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 69 260 3.9E-81 T 20-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMC99_RS05300 667c9f0a359fa764db2735dc1064b072 416 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 63 265 37.703 T 20-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMC99_RS05300 667c9f0a359fa764db2735dc1064b072 416 PANTHER PTHR21327 44 415 5.2E-130 T 20-04-2016 AMC99_RS03230 0731ce7260c4c2df57d049f6e5876077 439 SUPERFAMILY SSF48403 234 321 9.33E-8 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain AMC99_RS03230 0731ce7260c4c2df57d049f6e5876077 439 Gene3D G3DSA:1.25.40.20 234 323 3.6E-8 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain AMC99_RS02335 ad37b6d1e2c07b11f7dcd8a412a86347 585 SUPERFAMILY SSF56801 67 584 4.58E-149 T 20-04-2016 AMC99_RS02335 ad37b6d1e2c07b11f7dcd8a412a86347 585 PANTHER PTHR24096 73 581 1.8E-161 T 20-04-2016 AMC99_RS02335 ad37b6d1e2c07b11f7dcd8a412a86347 585 Gene3D G3DSA:3.40.50.980 74 238 5.6E-35 T 20-04-2016 AMC99_RS02335 ad37b6d1e2c07b11f7dcd8a412a86347 585 ProSitePatterns PS00455 Putative AMP-binding domain signature. 232 243 - T 20-04-2016 IPR020845 AMP-binding, conserved site AMC99_RS02335 ad37b6d1e2c07b11f7dcd8a412a86347 585 Gene3D G3DSA:3.40.50.980 239 407 1.3E-42 T 20-04-2016 AMC99_RS02335 ad37b6d1e2c07b11f7dcd8a412a86347 585 Gene3D G3DSA:3.30.300.30 485 582 1.4E-30 T 20-04-2016 AMC99_RS02335 ad37b6d1e2c07b11f7dcd8a412a86347 585 Gene3D G3DSA:2.30.38.10 408 484 6.9E-27 T 20-04-2016 AMC99_RS02335 ad37b6d1e2c07b11f7dcd8a412a86347 585 Pfam PF00501 AMP-binding enzyme 73 490 6.1E-102 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMC99_RS02335 ad37b6d1e2c07b11f7dcd8a412a86347 585 Pfam PF13193 AMP-binding enzyme C-terminal domain 499 575 7.6E-18 T 20-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMC99_RS05200 6d74aff0ba3a7d0af8bd4d5bf47093a4 434 SUPERFAMILY SSF53383 13 432 4.7E-176 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS05200 6d74aff0ba3a7d0af8bd4d5bf47093a4 434 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 20-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMC99_RS05200 6d74aff0ba3a7d0af8bd4d5bf47093a4 434 Gene3D G3DSA:3.90.1150.10 295 432 1.2E-52 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS05200 6d74aff0ba3a7d0af8bd4d5bf47093a4 434 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 432 52.226 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMC99_RS05200 6d74aff0ba3a7d0af8bd4d5bf47093a4 434 Pfam PF00464 Serine hydroxymethyltransferase 18 395 7.7E-175 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMC99_RS05200 6d74aff0ba3a7d0af8bd4d5bf47093a4 434 Gene3D G3DSA:3.40.640.10 47 294 3.6E-104 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS05200 6d74aff0ba3a7d0af8bd4d5bf47093a4 434 PANTHER PTHR11680 13 434 5.8E-251 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMC99_RS05200 6d74aff0ba3a7d0af8bd4d5bf47093a4 434 PIRSF PIRSF000412 3 434 5.2E-166 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMC99_RS02100 846ea7c6f3e10927611656364820b355 209 SUPERFAMILY SSF52317 6 198 5.3E-47 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS02100 846ea7c6f3e10927611656364820b355 209 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 207 33.24 T 20-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 AMC99_RS02100 846ea7c6f3e10927611656364820b355 209 PIRSF PIRSF000495 3 209 8.3E-66 T 20-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 AMC99_RS02100 846ea7c6f3e10927611656364820b355 209 PANTHER PTHR21235:SF1 7 209 3.0E-68 T 20-04-2016 AMC99_RS02100 846ea7c6f3e10927611656364820b355 209 Pfam PF00117 Glutamine amidotransferase class-I 7 204 2.8E-20 T 20-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMC99_RS02100 846ea7c6f3e10927611656364820b355 209 PANTHER PTHR21235 7 209 3.0E-68 T 20-04-2016 AMC99_RS02100 846ea7c6f3e10927611656364820b355 209 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 207 2.1E-61 T 20-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 AMC99_RS02100 846ea7c6f3e10927611656364820b355 209 Gene3D G3DSA:3.40.50.880 5 207 2.2E-62 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS11275 ea720af72cbf5600725e0b36bc0a1904 569 Gene3D G3DSA:3.90.780.10 375 563 2.7E-49 T 20-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMC99_RS11275 ea720af72cbf5600725e0b36bc0a1904 569 Pfam PF02872 5'-nucleotidase, C-terminal domain 374 530 7.5E-43 T 20-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMC99_RS11275 ea720af72cbf5600725e0b36bc0a1904 569 PANTHER PTHR11575:SF7 273 564 1.8E-119 T 20-04-2016 AMC99_RS11275 ea720af72cbf5600725e0b36bc0a1904 569 PANTHER PTHR11575:SF7 11 256 1.8E-119 T 20-04-2016 AMC99_RS11275 ea720af72cbf5600725e0b36bc0a1904 569 PRINTS PR01607 Apyrase family signature 432 455 1.8E-25 T 20-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMC99_RS11275 ea720af72cbf5600725e0b36bc0a1904 569 PRINTS PR01607 Apyrase family signature 32 50 1.8E-25 T 20-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMC99_RS11275 ea720af72cbf5600725e0b36bc0a1904 569 PRINTS PR01607 Apyrase family signature 504 523 1.8E-25 T 20-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMC99_RS11275 ea720af72cbf5600725e0b36bc0a1904 569 PRINTS PR01607 Apyrase family signature 274 297 1.8E-25 T 20-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMC99_RS11275 ea720af72cbf5600725e0b36bc0a1904 569 PRINTS PR01607 Apyrase family signature 239 256 1.8E-25 T 20-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMC99_RS11275 ea720af72cbf5600725e0b36bc0a1904 569 Gene3D G3DSA:3.60.21.10 28 365 5.3E-66 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like AMC99_RS11275 ea720af72cbf5600725e0b36bc0a1904 569 PANTHER PTHR11575 273 564 1.8E-119 T 20-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMC99_RS11275 ea720af72cbf5600725e0b36bc0a1904 569 PANTHER PTHR11575 11 256 1.8E-119 T 20-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMC99_RS11275 ea720af72cbf5600725e0b36bc0a1904 569 Pfam PF00149 Calcineurin-like phosphoesterase 35 291 1.4E-9 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMC99_RS11275 ea720af72cbf5600725e0b36bc0a1904 569 SUPERFAMILY SSF56300 28 364 1.46E-58 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like AMC99_RS11275 ea720af72cbf5600725e0b36bc0a1904 569 SUPERFAMILY SSF55816 373 564 2.75E-50 T 20-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMC99_RS09235 7ccad9d2ae309d5bafbf0592703c12c7 308 SUPERFAMILY SSF51735 1 136 2.96E-34 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09235 7ccad9d2ae309d5bafbf0592703c12c7 308 SMART SM00859 4 105 5.8E-18 T 20-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMC99_RS09235 7ccad9d2ae309d5bafbf0592703c12c7 308 Gene3D G3DSA:3.40.50.720 35 122 3.0E-17 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09235 7ccad9d2ae309d5bafbf0592703c12c7 308 Gene3D G3DSA:3.30.360.10 123 280 3.7E-34 T 20-04-2016 AMC99_RS09235 7ccad9d2ae309d5bafbf0592703c12c7 308 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 100 1.6E-9 T 20-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMC99_RS09235 7ccad9d2ae309d5bafbf0592703c12c7 308 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 299 47.295 T 20-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS09235 7ccad9d2ae309d5bafbf0592703c12c7 308 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 109 125 - T 20-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS09235 7ccad9d2ae309d5bafbf0592703c12c7 308 PANTHER PTHR32338 3 307 1.2E-104 T 20-04-2016 AMC99_RS09235 7ccad9d2ae309d5bafbf0592703c12c7 308 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 4 299 2.0E-105 T 20-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS09235 7ccad9d2ae309d5bafbf0592703c12c7 308 SUPERFAMILY SSF55347 114 280 2.88E-32 T 20-04-2016 AMC99_RS09235 7ccad9d2ae309d5bafbf0592703c12c7 308 PANTHER PTHR32338:SF9 3 307 1.2E-104 T 20-04-2016 AMC99_RS02685 6bee95d04be31debf72068595a2efac8 763 Pfam PF00905 Penicillin binding protein transpeptidase domain 394 631 1.7E-23 T 20-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMC99_RS02685 6bee95d04be31debf72068595a2efac8 763 PANTHER PTHR32282:SF5 67 658 9.1E-164 T 20-04-2016 AMC99_RS02685 6bee95d04be31debf72068595a2efac8 763 SUPERFAMILY SSF53955 131 334 2.5E-68 T 20-04-2016 IPR023346 Lysozyme-like domain AMC99_RS02685 6bee95d04be31debf72068595a2efac8 763 PANTHER PTHR32282 67 658 9.1E-164 T 20-04-2016 AMC99_RS02685 6bee95d04be31debf72068595a2efac8 763 Gene3D G3DSA:3.40.710.10 315 669 1.6E-94 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS02685 6bee95d04be31debf72068595a2efac8 763 SUPERFAMILY SSF56601 295 317 4.13E-95 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS02685 6bee95d04be31debf72068595a2efac8 763 SUPERFAMILY SSF56601 344 672 4.13E-95 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS02685 6bee95d04be31debf72068595a2efac8 763 Gene3D G3DSA:1.10.3810.10 141 314 5.0E-66 T 20-04-2016 AMC99_RS02685 6bee95d04be31debf72068595a2efac8 763 Pfam PF00912 Transglycosylase 142 313 1.7E-58 T 20-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 ProSitePatterns PS00099 Thiolases active site. 396 409 - T 20-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 Gene3D G3DSA:3.40.47.10 299 414 1.0E-53 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 Gene3D G3DSA:3.40.47.10 153 194 1.0E-53 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 SUPERFAMILY SSF53901 3 292 6.86E-58 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 ProSitePatterns PS00737 Thiolases signature 2. 361 377 - T 20-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 Pfam PF02803 Thiolase, C-terminal domain 292 414 7.7E-42 T 20-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 SUPERFAMILY SSF53901 293 414 1.14E-40 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 PANTHER PTHR18919 263 416 1.1E-189 T 20-04-2016 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 PANTHER PTHR18919 1 238 1.1E-189 T 20-04-2016 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 PIRSF PIRSF000429 1 416 1.8E-99 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 PANTHER PTHR18919:SF12 263 416 1.1E-189 T 20-04-2016 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 PANTHER PTHR18919:SF12 1 238 1.1E-189 T 20-04-2016 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 413 1.3E-111 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 Gene3D G3DSA:3.40.47.10 195 298 8.4E-52 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 Gene3D G3DSA:3.40.47.10 4 127 8.4E-52 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS10615 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 Pfam PF00108 Thiolase, N-terminal domain 5 236 1.0E-42 T 20-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AMC99_RS12495 ba7b82c37f3987eedc895773d27e3506 580 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 156 2.1E-15 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS12495 ba7b82c37f3987eedc895773d27e3506 580 Gene3D G3DSA:1.10.540.10 39 158 1.7E-19 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS12495 ba7b82c37f3987eedc895773d27e3506 580 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 478 574 8.2E-12 T 20-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMC99_RS12495 ba7b82c37f3987eedc895773d27e3506 580 PANTHER PTHR10909 33 473 9.7E-168 T 20-04-2016 AMC99_RS12495 ba7b82c37f3987eedc895773d27e3506 580 SUPERFAMILY SSF47203 287 461 9.02E-43 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS12495 ba7b82c37f3987eedc895773d27e3506 580 SUPERFAMILY SSF56645 38 275 9.03E-54 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS12495 ba7b82c37f3987eedc895773d27e3506 580 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 274 1.8E-13 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS12495 ba7b82c37f3987eedc895773d27e3506 580 Gene3D G3DSA:1.20.140.10 271 459 2.1E-49 T 20-04-2016 AMC99_RS12495 ba7b82c37f3987eedc895773d27e3506 580 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 288 450 1.2E-23 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS12495 ba7b82c37f3987eedc895773d27e3506 580 Gene3D G3DSA:2.40.110.10 161 270 6.0E-23 T 20-04-2016 AMC99_RS12495 ba7b82c37f3987eedc895773d27e3506 580 PANTHER PTHR10909:SF296 33 473 9.7E-168 T 20-04-2016 AMC99_RS12920 6bb22483625d686b46db1ce3d17c2ebf 408 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 49 383 1.8E-64 T 20-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 AMC99_RS12920 6bb22483625d686b46db1ce3d17c2ebf 408 PANTHER PTHR10443 1 101 1.7E-47 T 20-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 AMC99_RS12920 6bb22483625d686b46db1ce3d17c2ebf 408 PANTHER PTHR10443 124 384 1.7E-47 T 20-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 AMC99_RS12920 6bb22483625d686b46db1ce3d17c2ebf 408 SUPERFAMILY SSF51556 42 386 5.04E-70 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS12920 6bb22483625d686b46db1ce3d17c2ebf 408 Gene3D G3DSA:3.20.20.140 48 384 3.8E-86 T 20-04-2016 AMC99_RS06985 aeb8e86b6632e53889f4bd29c8aae948 252 Gene3D G3DSA:1.20.120.220 75 250 2.4E-46 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMC99_RS06985 aeb8e86b6632e53889f4bd29c8aae948 252 Pfam PF00119 ATP synthase A chain 29 245 1.4E-53 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMC99_RS06985 aeb8e86b6632e53889f4bd29c8aae948 252 SUPERFAMILY SSF81336 75 246 6.02E-42 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMC99_RS06985 aeb8e86b6632e53889f4bd29c8aae948 252 PANTHER PTHR11410 1 252 3.4E-78 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMC99_RS06985 aeb8e86b6632e53889f4bd29c8aae948 252 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 3 248 5.5E-60 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMC99_RS06985 aeb8e86b6632e53889f4bd29c8aae948 252 PRINTS PR00123 ATP synthase A subunit signature 232 247 6.2E-30 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMC99_RS06985 aeb8e86b6632e53889f4bd29c8aae948 252 PRINTS PR00123 ATP synthase A subunit signature 151 166 6.2E-30 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMC99_RS06985 aeb8e86b6632e53889f4bd29c8aae948 252 PRINTS PR00123 ATP synthase A subunit signature 84 100 6.2E-30 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMC99_RS06985 aeb8e86b6632e53889f4bd29c8aae948 252 PRINTS PR00123 ATP synthase A subunit signature 171 193 6.2E-30 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMC99_RS06985 aeb8e86b6632e53889f4bd29c8aae948 252 Hamap MF_01393 ATP synthase subunit a [atpB]. 2 252 15.421 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMC99_RS12190 5893b0c3122ace1f40f30d3dbeae1a83 299 Pfam PF12833 Helix-turn-helix domain 190 263 1.6E-8 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_RS09785 d0e6fb2ecf44a3bee675b459f8550cec 523 SUPERFAMILY SSF54534 88 244 4.12E-32 T 20-04-2016 AMC99_RS09785 d0e6fb2ecf44a3bee675b459f8550cec 523 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 4.8E-37 T 20-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMC99_RS09785 d0e6fb2ecf44a3bee675b459f8550cec 523 TIGRFAM TIGR00115 tig: trigger factor 11 419 2.1E-128 T 20-04-2016 IPR005215 Trigger factor GO:0015031 AMC99_RS09785 d0e6fb2ecf44a3bee675b459f8550cec 523 SUPERFAMILY SSF102735 1 131 2.75E-34 T 20-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMC99_RS09785 d0e6fb2ecf44a3bee675b459f8550cec 523 Gene3D G3DSA:3.10.50.40 155 218 2.0E-8 T 20-04-2016 AMC99_RS09785 d0e6fb2ecf44a3bee675b459f8550cec 523 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 420 1.4E-35 T 20-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AMC99_RS09785 d0e6fb2ecf44a3bee675b459f8550cec 523 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 240 3.5E-15 T 20-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AMC99_RS09785 d0e6fb2ecf44a3bee675b459f8550cec 523 Hamap MF_00303 Trigger factor [tig]. 1 426 20.786 T 20-04-2016 IPR005215 Trigger factor GO:0015031 AMC99_RS09785 d0e6fb2ecf44a3bee675b459f8550cec 523 Gene3D G3DSA:3.30.70.1050 1 117 8.6E-34 T 20-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMC99_RS09785 d0e6fb2ecf44a3bee675b459f8550cec 523 Gene3D G3DSA:1.10.3120.10 219 388 6.8E-52 T 20-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AMC99_RS09785 d0e6fb2ecf44a3bee675b459f8550cec 523 PANTHER PTHR30560 1 438 2.6E-97 T 20-04-2016 AMC99_RS09785 d0e6fb2ecf44a3bee675b459f8550cec 523 SUPERFAMILY SSF109998 251 436 2.85E-43 T 20-04-2016 IPR027304 Trigger factor/SurA domain AMC99_RS08870 60527e72e951b3d4430f40c00935cc51 439 Pfam PF12002 MgsA AAA+ ATPase C terminal 265 430 4.0E-62 T 20-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal AMC99_RS08870 60527e72e951b3d4430f40c00935cc51 439 Gene3D G3DSA:1.10.3710.10 345 437 5.9E-28 T 20-04-2016 AMC99_RS08870 60527e72e951b3d4430f40c00935cc51 439 PANTHER PTHR13779:SF7 19 437 6.8E-169 T 20-04-2016 AMC99_RS08870 60527e72e951b3d4430f40c00935cc51 439 Pfam PF16193 AAA C-terminal domain 192 264 8.1E-18 T 20-04-2016 IPR032423 AAA ATPase, C-terminal domain AMC99_RS08870 60527e72e951b3d4430f40c00935cc51 439 SUPERFAMILY SSF48019 250 434 5.1E-70 T 20-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 AMC99_RS08870 60527e72e951b3d4430f40c00935cc51 439 Gene3D G3DSA:1.10.8.60 160 220 3.2E-4 T 20-04-2016 AMC99_RS08870 60527e72e951b3d4430f40c00935cc51 439 Gene3D G3DSA:3.40.50.300 20 159 3.0E-26 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08870 60527e72e951b3d4430f40c00935cc51 439 Gene3D G3DSA:1.20.272.10 246 344 2.0E-41 T 20-04-2016 AMC99_RS08870 60527e72e951b3d4430f40c00935cc51 439 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 61 169 1.3E-14 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_RS08870 60527e72e951b3d4430f40c00935cc51 439 SMART SM00382 57 175 4.5E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS08870 60527e72e951b3d4430f40c00935cc51 439 PANTHER PTHR13779 19 437 6.8E-169 T 20-04-2016 AMC99_RS08870 60527e72e951b3d4430f40c00935cc51 439 SUPERFAMILY SSF52540 21 225 4.95E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS01675 395f6a30ac085d1a53caed3b893f92bd 348 SUPERFAMILY SSF52096 3 187 2.7E-63 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS01675 395f6a30ac085d1a53caed3b893f92bd 348 SUPERFAMILY SSF52096 245 320 2.7E-63 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS01675 395f6a30ac085d1a53caed3b893f92bd 348 PANTHER PTHR11941:SF53 241 319 5.6E-115 T 20-04-2016 AMC99_RS01675 395f6a30ac085d1a53caed3b893f92bd 348 PANTHER PTHR11941:SF53 2 187 5.6E-115 T 20-04-2016 AMC99_RS01675 395f6a30ac085d1a53caed3b893f92bd 348 Pfam PF16113 Enoyl-CoA hydratase/isomerase 13 336 1.9E-116 T 20-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 AMC99_RS01675 395f6a30ac085d1a53caed3b893f92bd 348 Gene3D G3DSA:3.90.226.10 2 198 2.8E-57 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS01675 395f6a30ac085d1a53caed3b893f92bd 348 PANTHER PTHR11941 241 319 5.6E-115 T 20-04-2016 AMC99_RS01675 395f6a30ac085d1a53caed3b893f92bd 348 PANTHER PTHR11941 2 187 5.6E-115 T 20-04-2016 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 SMART SM00387 563 674 6.0E-42 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 Gene3D G3DSA:3.30.565.10 504 675 7.5E-50 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 SMART SM00388 452 517 2.5E-24 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 Gene3D G3DSA:3.30.450.20 313 456 2.1E-20 T 20-04-2016 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 Pfam PF08448 PAS fold 321 433 8.7E-11 T 20-04-2016 IPR013656 PAS fold-4 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 311 438 6.9E-10 T 20-04-2016 IPR000014 PAS domain AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 Pfam PF00072 Response regulator receiver domain 699 816 9.6E-21 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 Gene3D G3DSA:3.40.50.2300 696 821 2.0E-34 T 20-04-2016 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 Gene3D G3DSA:1.10.287.130 457 503 6.5E-16 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 Pfam PF05231 MASE1 26 301 2.5E-26 T 20-04-2016 IPR007895 MASE1 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 SUPERFAMILY SSF52172 695 828 7.12E-33 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 SUPERFAMILY SSF47226 849 926 1.02E-9 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 SUPERFAMILY SSF55785 319 434 1.13E-14 T 20-04-2016 IPR000014 PAS domain AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 SMART SM00091 314 380 1.3E-6 T 20-04-2016 IPR000014 PAS domain AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 Gene3D G3DSA:1.20.120.160 850 926 5.6E-9 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 564 672 4.6E-32 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 652 1.5E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 627 1.5E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 658 671 1.5E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 613 1.5E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 PANTHER PTHR24423 312 863 2.4E-158 T 20-04-2016 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 PANTHER PTHR24423 1 26 2.4E-158 T 20-04-2016 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 SUPERFAMILY SSF47384 437 518 3.14E-21 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 SUPERFAMILY SSF55874 506 673 2.88E-51 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 Pfam PF01627 Hpt domain 851 930 7.6E-10 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 SMART SM00448 697 816 4.1E-31 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS10805 b6151053f6ea17767abff1d6ede9da8c 933 Pfam PF00512 His Kinase A (phospho-acceptor) domain 452 517 1.9E-19 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS04205 4b89b08fafccfef90a8b7ae429c861f5 147 Gene3D G3DSA:3.40.50.10110 1 125 2.0E-19 T 20-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AMC99_RS04205 4b89b08fafccfef90a8b7ae429c861f5 147 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 125 2.7E-19 T 20-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AMC99_RS04205 4b89b08fafccfef90a8b7ae429c861f5 147 SUPERFAMILY SSF102400 1 126 2.22E-24 T 20-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AMC99_RS01290 893c52c14c2830b710234f7b82b2df77 360 Gene3D G3DSA:3.60.150.10 10 359 6.6E-153 T 20-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS01290 893c52c14c2830b710234f7b82b2df77 360 TIGRFAM TIGR00033 aroC: chorismate synthase 10 358 2.8E-132 T 20-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS01290 893c52c14c2830b710234f7b82b2df77 360 PIRSF PIRSF001456 3 359 6.7E-140 T 20-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS01290 893c52c14c2830b710234f7b82b2df77 360 PANTHER PTHR21085 2 358 8.5E-193 T 20-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS01290 893c52c14c2830b710234f7b82b2df77 360 ProSitePatterns PS00789 Chorismate synthase signature 3. 327 343 - T 20-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS01290 893c52c14c2830b710234f7b82b2df77 360 Pfam PF01264 Chorismate synthase 10 352 6.7E-138 T 20-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS01290 893c52c14c2830b710234f7b82b2df77 360 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 20-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS01290 893c52c14c2830b710234f7b82b2df77 360 Hamap MF_00300 Chorismate synthase [aroC]. 10 360 36.337 T 20-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS01290 893c52c14c2830b710234f7b82b2df77 360 SUPERFAMILY SSF103263 3 358 5.1E-139 T 20-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS01290 893c52c14c2830b710234f7b82b2df77 360 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 20-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS00780 6939243cd510abf9c25a2c9b491f820c 508 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 130 289 1.4E-45 T 20-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain AMC99_RS00780 6939243cd510abf9c25a2c9b491f820c 508 PANTHER PTHR11780:SF0 1 438 2.9E-201 T 20-04-2016 AMC99_RS00780 6939243cd510abf9c25a2c9b491f820c 508 PANTHER PTHR11780:SF0 459 502 2.9E-201 T 20-04-2016 AMC99_RS00780 6939243cd510abf9c25a2c9b491f820c 508 SUPERFAMILY SSF142019 80 297 1.11E-76 T 20-04-2016 AMC99_RS00780 6939243cd510abf9c25a2c9b491f820c 508 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 413 424 - T 20-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 AMC99_RS00780 6939243cd510abf9c25a2c9b491f820c 508 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 402 503 1.6E-26 T 20-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AMC99_RS00780 6939243cd510abf9c25a2c9b491f820c 508 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 237 252 - T 20-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 AMC99_RS00780 6939243cd510abf9c25a2c9b491f820c 508 SUPERFAMILY SSF142984 315 395 2.48E-19 T 20-04-2016 AMC99_RS00780 6939243cd510abf9c25a2c9b491f820c 508 PANTHER PTHR11780 1 438 2.9E-201 T 20-04-2016 AMC99_RS00780 6939243cd510abf9c25a2c9b491f820c 508 PANTHER PTHR11780 459 502 2.9E-201 T 20-04-2016 AMC99_RS00780 6939243cd510abf9c25a2c9b491f820c 508 SMART SM00928 400 445 8.0E-15 T 20-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AMC99_RS00780 6939243cd510abf9c25a2c9b491f820c 508 SUPERFAMILY SSF140490 397 502 6.15E-22 T 20-04-2016 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 Gene3D G3DSA:3.40.50.880 167 391 1.1E-66 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 Gene3D G3DSA:3.50.30.20 16 157 6.2E-52 T 20-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 276 292 1.6E-29 T 20-04-2016 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 293 310 1.6E-29 T 20-04-2016 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 244 258 1.6E-29 T 20-04-2016 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 205 219 1.6E-29 T 20-04-2016 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 14 393 43.402 T 20-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00097 Anthranilate synthase component II signature 367 380 1.1E-7 T 20-04-2016 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00097 Anthranilate synthase component II signature 247 256 1.1E-7 T 20-04-2016 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00097 Anthranilate synthase component II signature 276 287 1.1E-7 T 20-04-2016 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 Pfam PF00117 Glutamine amidotransferase class-I 207 389 3.1E-44 T 20-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 17 391 1.6E-122 T 20-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00096 Glutamine amidotransferase superfamily signature 247 256 9.9E-13 T 20-04-2016 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00096 Glutamine amidotransferase superfamily signature 367 380 9.9E-13 T 20-04-2016 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00096 Glutamine amidotransferase superfamily signature 276 287 9.9E-13 T 20-04-2016 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 PANTHER PTHR11405 14 391 4.8E-177 T 20-04-2016 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 SMART SM01097 14 144 5.6E-80 T 20-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 16 143 8.6E-46 T 20-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 SUPERFAMILY SSF52021 16 160 2.09E-52 T 20-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMC99_RS05230 5df36aa6f9453d4a9cb348689ca62963 393 SUPERFAMILY SSF52317 199 391 5.04E-53 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS02905 8ff7d9b403afb6a294685cf396c362d4 378 SUPERFAMILY SSF53756 8 370 1.84E-55 T 20-04-2016 AMC99_RS02905 8ff7d9b403afb6a294685cf396c362d4 378 Gene3D G3DSA:3.40.50.2000 163 342 4.2E-15 T 20-04-2016 AMC99_RS02905 8ff7d9b403afb6a294685cf396c362d4 378 PANTHER PTHR12526 5 374 1.7E-35 T 20-04-2016 AMC99_RS02905 8ff7d9b403afb6a294685cf396c362d4 378 Pfam PF00534 Glycosyl transferases group 1 195 350 3.6E-25 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 AMC99_RS02905 8ff7d9b403afb6a294685cf396c362d4 378 Pfam PF13439 Glycosyltransferase Family 4 18 180 6.3E-8 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMC99_RS09320 fef34465ea6481b942203460c73f73ed 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 92 110 5.2E-41 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMC99_RS09320 fef34465ea6481b942203460c73f73ed 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 14 41 5.2E-41 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMC99_RS09320 fef34465ea6481b942203460c73f73ed 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 110 136 5.2E-41 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMC99_RS09320 fef34465ea6481b942203460c73f73ed 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 165 193 5.2E-41 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMC99_RS09320 fef34465ea6481b942203460c73f73ed 271 Pfam PF00902 Sec-independent protein translocase protein (TatC) 17 232 1.9E-67 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMC99_RS09320 fef34465ea6481b942203460c73f73ed 271 PANTHER PTHR30371:SF0 9 270 3.8E-85 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMC99_RS09320 fef34465ea6481b942203460c73f73ed 271 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 15 237 3.7E-62 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMC99_RS09320 fef34465ea6481b942203460c73f73ed 271 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 8 251 18.861 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMC99_RS09320 fef34465ea6481b942203460c73f73ed 271 PANTHER PTHR30371 9 270 3.8E-85 T 20-04-2016 AMC99_RS13135 778bd8aa912393556539199b440b587f 252 SUPERFAMILY SSF51735 3 246 2.21E-70 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS13135 778bd8aa912393556539199b440b587f 252 PANTHER PTHR24314:SF12 3 252 6.4E-63 T 20-04-2016 AMC99_RS13135 778bd8aa912393556539199b440b587f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.8E-34 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13135 778bd8aa912393556539199b440b587f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.8E-34 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13135 778bd8aa912393556539199b440b587f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.8E-34 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13135 778bd8aa912393556539199b440b587f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.8E-34 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13135 778bd8aa912393556539199b440b587f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.8E-34 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13135 778bd8aa912393556539199b440b587f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.8E-34 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13135 778bd8aa912393556539199b440b587f 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS13135 778bd8aa912393556539199b440b587f 252 PANTHER PTHR24314 3 252 6.4E-63 T 20-04-2016 AMC99_RS13135 778bd8aa912393556539199b440b587f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.4E-9 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13135 778bd8aa912393556539199b440b587f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.4E-9 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13135 778bd8aa912393556539199b440b587f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.4E-9 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13135 778bd8aa912393556539199b440b587f 252 Gene3D G3DSA:3.40.50.720 3 248 2.6E-72 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS13135 778bd8aa912393556539199b440b587f 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 187 0.0039 T 20-04-2016 AMC99_RS13135 778bd8aa912393556539199b440b587f 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 245 1.7E-58 T 20-04-2016 AMC99_RS02440 1d6bb1e1567a44b711c94ca256c8001e 505 PANTHER PTHR30536 17 505 2.6E-178 T 20-04-2016 AMC99_RS02440 1d6bb1e1567a44b711c94ca256c8001e 505 SMART SM00858 22 93 2.1E-11 T 20-04-2016 IPR013974 SAF domain AMC99_RS02440 1d6bb1e1567a44b711c94ca256c8001e 505 PANTHER PTHR30536:SF5 17 505 2.6E-178 T 20-04-2016 AMC99_RS02440 1d6bb1e1567a44b711c94ca256c8001e 505 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 120 504 7.0E-137 T 20-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AMC99_RS02440 1d6bb1e1567a44b711c94ca256c8001e 505 Pfam PF08666 SAF domain 22 93 1.4E-12 T 20-04-2016 IPR013974 SAF domain AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 SUPERFAMILY SSF53738 261 368 8.63E-32 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 SUPERFAMILY SSF53738 4 131 1.33E-37 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 368 4.5E-21 T 20-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 458 1.5E-11 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 Gene3D G3DSA:3.40.120.10 176 253 3.9E-27 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 99 108 - T 20-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 Gene3D G3DSA:3.40.120.10 254 371 1.4E-40 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 Gene3D G3DSA:3.30.310.50 374 458 1.2E-22 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 237 252 5.4E-24 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 208 221 5.4E-24 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 5.4E-24 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 98 112 5.4E-24 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 Gene3D G3DSA:3.40.120.10 11 139 9.8E-33 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 11 134 2.0E-33 T 20-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 155 257 2.2E-19 T 20-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 PANTHER PTHR22573 5 467 6.1E-135 T 20-04-2016 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 SUPERFAMILY SSF53738 168 258 9.81E-25 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 SUPERFAMILY SSF55957 371 458 2.62E-19 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS13050 c28cb9540bc7e484925051c825371165 471 PANTHER PTHR22573:SF28 5 467 6.1E-135 T 20-04-2016 AMC99_RS08125 ba63f2ec6232a7b3138a8d121aa3381c 289 Pfam PF00231 ATP synthase 3 289 5.0E-93 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMC99_RS08125 ba63f2ec6232a7b3138a8d121aa3381c 289 PRINTS PR00126 ATP synthase gamma subunit signature 170 187 8.7E-31 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMC99_RS08125 ba63f2ec6232a7b3138a8d121aa3381c 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 8.7E-31 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMC99_RS08125 ba63f2ec6232a7b3138a8d121aa3381c 289 PRINTS PR00126 ATP synthase gamma subunit signature 75 94 8.7E-31 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMC99_RS08125 ba63f2ec6232a7b3138a8d121aa3381c 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 8.7E-31 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMC99_RS08125 ba63f2ec6232a7b3138a8d121aa3381c 289 Gene3D G3DSA:1.10.287.80 238 284 2.0E-29 T 20-04-2016 AMC99_RS08125 ba63f2ec6232a7b3138a8d121aa3381c 289 Gene3D G3DSA:1.10.287.80 19 60 9.6E-31 T 20-04-2016 AMC99_RS08125 ba63f2ec6232a7b3138a8d121aa3381c 289 Gene3D G3DSA:1.10.287.80 204 237 9.6E-31 T 20-04-2016 AMC99_RS08125 ba63f2ec6232a7b3138a8d121aa3381c 289 Gene3D G3DSA:3.40.1380.10 73 195 1.5E-34 T 20-04-2016 AMC99_RS08125 ba63f2ec6232a7b3138a8d121aa3381c 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 289 4.2E-104 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMC99_RS08125 ba63f2ec6232a7b3138a8d121aa3381c 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 289 34.064 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMC99_RS08125 ba63f2ec6232a7b3138a8d121aa3381c 289 SUPERFAMILY SSF52943 2 289 1.83E-88 T 20-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain AMC99_RS08125 ba63f2ec6232a7b3138a8d121aa3381c 289 PIRSF PIRSF039089 1 289 3.8E-101 T 20-04-2016 AMC99_RS08125 ba63f2ec6232a7b3138a8d121aa3381c 289 PANTHER PTHR11693 1 289 4.5E-119 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMC99_RS08125 ba63f2ec6232a7b3138a8d121aa3381c 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 20-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site AMC99_RS11620 d5875e2c424a3160002a91c4c517c3fd 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 5 234 1.0E-52 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMC99_RS11620 d5875e2c424a3160002a91c4c517c3fd 254 SUPERFAMILY SSF52096 2 248 4.61E-71 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS11620 d5875e2c424a3160002a91c4c517c3fd 254 PANTHER PTHR11941:SF72 1 254 3.3E-85 T 20-04-2016 AMC99_RS11620 d5875e2c424a3160002a91c4c517c3fd 254 PANTHER PTHR11941 1 254 3.3E-85 T 20-04-2016 AMC99_RS11620 d5875e2c424a3160002a91c4c517c3fd 254 Gene3D G3DSA:3.90.226.10 2 248 3.7E-73 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 Gene3D G3DSA:3.30.413.10 120 275 4.2E-40 T 20-04-2016 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 272 5.5E-40 T 20-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 409 541 1.7E-12 T 20-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 SUPERFAMILY SSF55124 1 126 1.06E-32 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 SUPERFAMILY SSF56014 401 541 5.63E-37 T 20-04-2016 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 SUPERFAMILY SSF55124 251 275 3.27E-26 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 SUPERFAMILY SSF55124 309 415 3.27E-26 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 339 393 6.5E-12 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 52 109 1.2E-17 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 Gene3D G3DSA:3.90.480.10 315 395 2.2E-38 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 Gene3D G3DSA:3.90.480.10 48 117 2.2E-38 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 PANTHER PTHR11493:SF47 321 543 4.6E-140 T 20-04-2016 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 PANTHER PTHR11493:SF47 1 293 4.6E-140 T 20-04-2016 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 PANTHER PTHR11493 321 543 4.6E-140 T 20-04-2016 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 PANTHER PTHR11493 1 293 4.6E-140 T 20-04-2016 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 SUPERFAMILY SSF56014 120 275 3.01E-45 T 20-04-2016 AMC99_RS09010 30c6e1a88b4201f238bcd4694d6b0aca 543 Gene3D G3DSA:3.30.413.10 401 541 4.8E-35 T 20-04-2016 AMC99_RS03440 b8f4bfc3a831789b57d2daf240e9a5ca 141 Pfam PF03918 Cytochrome C biogenesis protein 31 138 7.5E-39 T 20-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family AMC99_RS03440 b8f4bfc3a831789b57d2daf240e9a5ca 141 PANTHER PTHR30009:SF7 1 138 1.5E-19 T 20-04-2016 AMC99_RS03440 b8f4bfc3a831789b57d2daf240e9a5ca 141 PANTHER PTHR30009 1 138 1.5E-19 T 20-04-2016 AMC99_RS07825 662a8945aea6846c1fee06f45d71b2b6 966 Pfam PF05193 Peptidase M16 inactive domain 233 315 8.7E-13 T 20-04-2016 IPR007863 Peptidase M16, C-terminal AMC99_RS07825 662a8945aea6846c1fee06f45d71b2b6 966 Pfam PF05193 Peptidase M16 inactive domain 734 838 1.9E-5 T 20-04-2016 IPR007863 Peptidase M16, C-terminal AMC99_RS07825 662a8945aea6846c1fee06f45d71b2b6 966 Gene3D G3DSA:3.30.830.10 550 762 8.1E-20 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMC99_RS07825 662a8945aea6846c1fee06f45d71b2b6 966 PANTHER PTHR11851 61 839 2.1E-69 T 20-04-2016 AMC99_RS07825 662a8945aea6846c1fee06f45d71b2b6 966 Gene3D G3DSA:3.30.830.10 61 274 1.8E-38 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMC99_RS07825 662a8945aea6846c1fee06f45d71b2b6 966 Gene3D G3DSA:3.30.830.10 787 956 5.6E-5 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMC99_RS07825 662a8945aea6846c1fee06f45d71b2b6 966 Pfam PF00675 Insulinase (Peptidase family M16) 80 193 1.7E-16 T 20-04-2016 IPR011765 Peptidase M16, N-terminal AMC99_RS07825 662a8945aea6846c1fee06f45d71b2b6 966 PANTHER PTHR11851:SF144 61 839 2.1E-69 T 20-04-2016 AMC99_RS07825 662a8945aea6846c1fee06f45d71b2b6 966 SUPERFAMILY SSF63411 57 269 3.49E-37 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_RS07825 662a8945aea6846c1fee06f45d71b2b6 966 SUPERFAMILY SSF63411 549 763 6.98E-25 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_RS07825 662a8945aea6846c1fee06f45d71b2b6 966 SUPERFAMILY SSF63411 786 955 2.97E-12 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_RS10630 e6d705e6fb8a914f31c8fc1dbfa318b6 876 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 160 1.9E-15 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS10630 e6d705e6fb8a914f31c8fc1dbfa318b6 876 SUPERFAMILY SSF56935 443 518 2.85E-108 T 20-04-2016 AMC99_RS10630 e6d705e6fb8a914f31c8fc1dbfa318b6 876 SUPERFAMILY SSF56935 29 411 2.85E-108 T 20-04-2016 AMC99_RS10630 e6d705e6fb8a914f31c8fc1dbfa318b6 876 SUPERFAMILY SSF56935 585 876 2.85E-108 T 20-04-2016 AMC99_RS10630 e6d705e6fb8a914f31c8fc1dbfa318b6 876 Gene3D G3DSA:2.40.170.20 574 876 2.0E-84 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS10630 e6d705e6fb8a914f31c8fc1dbfa318b6 876 Gene3D G3DSA:2.40.170.20 171 513 2.0E-84 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS10630 e6d705e6fb8a914f31c8fc1dbfa318b6 876 Gene3D G3DSA:2.170.130.10 34 166 3.3E-25 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS10630 e6d705e6fb8a914f31c8fc1dbfa318b6 876 PANTHER PTHR32552 747 876 2.4E-91 T 20-04-2016 AMC99_RS10630 e6d705e6fb8a914f31c8fc1dbfa318b6 876 PANTHER PTHR32552 579 728 2.4E-91 T 20-04-2016 AMC99_RS10630 e6d705e6fb8a914f31c8fc1dbfa318b6 876 PANTHER PTHR32552 27 484 2.4E-91 T 20-04-2016 AMC99_RS10630 e6d705e6fb8a914f31c8fc1dbfa318b6 876 Pfam PF00593 TonB dependent receptor 600 873 6.4E-22 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS10630 e6d705e6fb8a914f31c8fc1dbfa318b6 876 PANTHER PTHR32552:SF33 747 876 2.4E-91 T 20-04-2016 AMC99_RS10630 e6d705e6fb8a914f31c8fc1dbfa318b6 876 PANTHER PTHR32552:SF33 579 728 2.4E-91 T 20-04-2016 AMC99_RS10630 e6d705e6fb8a914f31c8fc1dbfa318b6 876 PANTHER PTHR32552:SF33 27 484 2.4E-91 T 20-04-2016 AMC99_RS12595 4412c0a6c1f443a2a030eaf29fa5c952 209 Gene3D G3DSA:3.40.30.10 6 91 4.4E-17 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS12595 4412c0a6c1f443a2a030eaf29fa5c952 209 Gene3D G3DSA:1.20.1050.10 92 206 1.5E-27 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS12595 4412c0a6c1f443a2a030eaf29fa5c952 209 SUPERFAMILY SSF47616 93 206 2.73E-26 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS12595 4412c0a6c1f443a2a030eaf29fa5c952 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 11 82 6.8E-7 T 20-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_RS12595 4412c0a6c1f443a2a030eaf29fa5c952 209 PANTHER PTHR11260 1 205 2.5E-34 T 20-04-2016 AMC99_RS12595 4412c0a6c1f443a2a030eaf29fa5c952 209 PANTHER PTHR11260:SF143 1 205 2.5E-34 T 20-04-2016 AMC99_RS12595 4412c0a6c1f443a2a030eaf29fa5c952 209 SUPERFAMILY SSF52833 4 84 2.7E-15 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS12595 4412c0a6c1f443a2a030eaf29fa5c952 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 126 203 6.9E-11 T 20-04-2016 IPR004046 Glutathione S-transferase, C-terminal AMC99_RS01020 ca599c28a023a6150a4e3dbf7471ab1f 379 Gene3D G3DSA:3.40.630.10 109 371 5.2E-33 T 20-04-2016 AMC99_RS01020 ca599c28a023a6150a4e3dbf7471ab1f 379 SUPERFAMILY SSF53187 110 375 3.18E-49 T 20-04-2016 AMC99_RS01020 ca599c28a023a6150a4e3dbf7471ab1f 379 PANTHER PTHR12756 1 313 2.0E-82 T 20-04-2016 AMC99_RS01020 ca599c28a023a6150a4e3dbf7471ab1f 379 PANTHER PTHR12756:SF18 1 313 2.0E-82 T 20-04-2016 AMC99_RS01020 ca599c28a023a6150a4e3dbf7471ab1f 379 Pfam PF00246 Zinc carboxypeptidase 132 235 4.0E-12 T 20-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMC99_RS09565 75cd24ee0ecfe35bb3b8e2e35f26b9ae 100 PANTHER PTHR15004:SF0 1 100 9.1E-29 T 20-04-2016 AMC99_RS09565 75cd24ee0ecfe35bb3b8e2e35f26b9ae 100 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 100 22.34 T 20-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMC99_RS09565 75cd24ee0ecfe35bb3b8e2e35f26b9ae 100 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 95 1.5E-22 T 20-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMC99_RS09565 75cd24ee0ecfe35bb3b8e2e35f26b9ae 100 PANTHER PTHR15004 1 100 9.1E-29 T 20-04-2016 AMC99_RS09565 75cd24ee0ecfe35bb3b8e2e35f26b9ae 100 SUPERFAMILY SSF141000 2 98 5.62E-28 T 20-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMC99_RS09565 75cd24ee0ecfe35bb3b8e2e35f26b9ae 100 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 100 5.9E-25 T 20-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMC99_RS11780 8e9db18d2a479afcc3df6524b3aae366 281 SUPERFAMILY SSF48452 126 263 1.32E-13 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS11780 8e9db18d2a479afcc3df6524b3aae366 281 Gene3D G3DSA:1.25.40.10 82 271 5.1E-16 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS11780 8e9db18d2a479afcc3df6524b3aae366 281 Pfam PF14559 Tetratricopeptide repeat 163 231 1.1E-5 T 20-04-2016 AMC99_RS02080 5f965a2e3c7f411e7689345fbf569351 211 ProSitePatterns PS00856 Guanylate kinase-like signature. 45 62 - T 20-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AMC99_RS02080 5f965a2e3c7f411e7689345fbf569351 211 PANTHER PTHR23117 7 207 1.1E-85 T 20-04-2016 AMC99_RS02080 5f965a2e3c7f411e7689345fbf569351 211 PANTHER PTHR23117:SF13 7 207 1.1E-85 T 20-04-2016 AMC99_RS02080 5f965a2e3c7f411e7689345fbf569351 211 SMART SM00072 10 193 3.0E-61 T 20-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMC99_RS02080 5f965a2e3c7f411e7689345fbf569351 211 Gene3D G3DSA:3.40.50.300 9 33 9.4E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02080 5f965a2e3c7f411e7689345fbf569351 211 Gene3D G3DSA:3.40.50.300 93 201 9.4E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02080 5f965a2e3c7f411e7689345fbf569351 211 Hamap MF_00328 Guanylate kinase [gmk]. 9 193 36.105 T 20-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AMC99_RS02080 5f965a2e3c7f411e7689345fbf569351 211 Pfam PF00625 Guanylate kinase 14 191 3.5E-49 T 20-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMC99_RS02080 5f965a2e3c7f411e7689345fbf569351 211 Gene3D G3DSA:3.30.63.10 41 92 2.6E-26 T 20-04-2016 AMC99_RS02080 5f965a2e3c7f411e7689345fbf569351 211 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 12 190 5.3E-71 T 20-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AMC99_RS02080 5f965a2e3c7f411e7689345fbf569351 211 SUPERFAMILY SSF52540 9 196 5.8E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03350 c8a445a17577e566282a61fde0a4ae5f 185 Pfam PF01765 Ribosome recycling factor 20 183 1.6E-58 T 20-04-2016 IPR023584 Ribosome recycling factor domain AMC99_RS03350 c8a445a17577e566282a61fde0a4ae5f 185 PANTHER PTHR20982 4 185 6.5E-72 T 20-04-2016 IPR002661 Ribosome recycling factor GO:0006412 AMC99_RS03350 c8a445a17577e566282a61fde0a4ae5f 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 184 5.8E-64 T 20-04-2016 IPR002661 Ribosome recycling factor GO:0006412 AMC99_RS03350 c8a445a17577e566282a61fde0a4ae5f 185 SUPERFAMILY SSF55194 4 184 1.26E-66 T 20-04-2016 IPR023584 Ribosome recycling factor domain AMC99_RS03350 c8a445a17577e566282a61fde0a4ae5f 185 Gene3D G3DSA:1.10.132.20 66 184 2.5E-39 T 20-04-2016 IPR023584 Ribosome recycling factor domain AMC99_RS03350 c8a445a17577e566282a61fde0a4ae5f 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 25.307 T 20-04-2016 IPR002661 Ribosome recycling factor GO:0006412 AMC99_RS09150 b86eef925416343c1f39d92993bef53a 314 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 6 302 1.3E-86 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS09150 b86eef925416343c1f39d92993bef53a 314 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 305 36.333 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS09150 b86eef925416343c1f39d92993bef53a 314 PANTHER PTHR11265:SF0 7 307 3.3E-129 T 20-04-2016 AMC99_RS09150 b86eef925416343c1f39d92993bef53a 314 PIRSF PIRSF004486 2 306 2.6E-96 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS09150 b86eef925416343c1f39d92993bef53a 314 Pfam PF01795 MraW methylase family 5 302 6.6E-91 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS09150 b86eef925416343c1f39d92993bef53a 314 Gene3D G3DSA:3.40.50.150 7 111 3.8E-45 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS09150 b86eef925416343c1f39d92993bef53a 314 Gene3D G3DSA:3.40.50.150 214 306 3.8E-45 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS09150 b86eef925416343c1f39d92993bef53a 314 PANTHER PTHR11265 7 307 3.3E-129 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS09150 b86eef925416343c1f39d92993bef53a 314 SUPERFAMILY SSF81799 115 211 2.22E-31 T 20-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS09150 b86eef925416343c1f39d92993bef53a 314 SUPERFAMILY SSF53335 6 114 8.28E-47 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS09150 b86eef925416343c1f39d92993bef53a 314 SUPERFAMILY SSF53335 211 304 8.28E-47 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS09150 b86eef925416343c1f39d92993bef53a 314 Gene3D G3DSA:1.10.150.170 113 213 1.1E-35 T 20-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 SUPERFAMILY SSF46767 262 343 1.44E-30 T 20-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 SUPERFAMILY SSF57884 5 76 1.44E-28 T 20-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 Gene3D G3DSA:1.10.10.60 82 134 1.1E-15 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 Gene3D G3DSA:3.40.10.10 5 81 2.9E-30 T 20-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 PIRSF PIRSF000409 1 345 5.6E-124 T 20-04-2016 IPR016221 Bifunctional regulatory protein Ada AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 Pfam PF02805 Metal binding domain of Ada 11 74 4.3E-29 T 20-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 Gene3D G3DSA:3.30.160.70 172 261 1.0E-25 T 20-04-2016 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 313 319 - T 20-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 SUPERFAMILY SSF46689 94 128 6.72E-8 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 Gene3D G3DSA:1.10.10.10 262 343 4.4E-33 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 PANTHER PTHR10815:SF9 154 343 1.7E-72 T 20-04-2016 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 SMART SM00342 96 178 2.1E-13 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 186 259 7.6E-5 T 20-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 PANTHER PTHR10815 154 343 1.7E-72 T 20-04-2016 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 263 342 3.6E-33 T 20-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 Pfam PF12833 Helix-turn-helix domain 102 179 2.7E-17 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 264 343 1.1E-31 T 20-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMC99_RS08100 395c882f1645a104d823c30c069b9190 345 SUPERFAMILY SSF53155 185 260 2.55E-17 T 20-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 AMC99_RS02500 080428529cf7757745811dfa9c2b754b 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 6 646 51.102 T 20-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 AMC99_RS02500 080428529cf7757745811dfa9c2b754b 649 SUPERFAMILY SSF56801 21 643 1.57E-178 T 20-04-2016 AMC99_RS02500 080428529cf7757745811dfa9c2b754b 649 PANTHER PTHR24095 24 648 0.0 T 20-04-2016 AMC99_RS02500 080428529cf7757745811dfa9c2b754b 649 PANTHER PTHR24095:SF178 24 648 0.0 T 20-04-2016 AMC99_RS02500 080428529cf7757745811dfa9c2b754b 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 262 273 - T 20-04-2016 IPR020845 AMP-binding, conserved site AMC99_RS02500 080428529cf7757745811dfa9c2b754b 649 Gene3D G3DSA:3.40.50.980 80 267 1.4E-38 T 20-04-2016 AMC99_RS02500 080428529cf7757745811dfa9c2b754b 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 24 643 7.1E-304 T 20-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 AMC99_RS02500 080428529cf7757745811dfa9c2b754b 649 Pfam PF00501 AMP-binding enzyme 89 523 1.2E-91 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMC99_RS02500 080428529cf7757745811dfa9c2b754b 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 28 83 5.0E-25 T 20-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 AMC99_RS02500 080428529cf7757745811dfa9c2b754b 649 Gene3D G3DSA:3.40.50.980 268 439 2.2E-28 T 20-04-2016 AMC99_RS02500 080428529cf7757745811dfa9c2b754b 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 3.3E-25 T 20-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMC99_RS02500 080428529cf7757745811dfa9c2b754b 649 Gene3D G3DSA:2.30.38.10 440 516 2.3E-8 T 20-04-2016 AMC99_RS02500 080428529cf7757745811dfa9c2b754b 649 Gene3D G3DSA:3.30.300.30 519 635 1.6E-27 T 20-04-2016 AMC99_RS04875 f266c02510dc9a46f42ffafcc2dc6c41 696 Gene3D G3DSA:3.30.565.10 544 683 2.0E-27 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS04875 f266c02510dc9a46f42ffafcc2dc6c41 696 SMART SM00387 573 680 7.8E-21 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS04875 f266c02510dc9a46f42ffafcc2dc6c41 696 SUPERFAMILY SSF55781 322 455 1.5E-8 T 20-04-2016 IPR029016 GAF domain-like AMC99_RS04875 f266c02510dc9a46f42ffafcc2dc6c41 696 Gene3D G3DSA:3.30.450.40 322 466 2.3E-5 T 20-04-2016 IPR029016 GAF domain-like AMC99_RS04875 f266c02510dc9a46f42ffafcc2dc6c41 696 PANTHER PTHR24423 456 685 1.1E-31 T 20-04-2016 AMC99_RS04875 f266c02510dc9a46f42ffafcc2dc6c41 696 TIGRFAM TIGR02916 PEP_his_kin: putative PEP-CTERM system histidine kinase 7 677 8.8E-143 T 20-04-2016 IPR014265 Signal transduction histidine kinase, PEP-CTERM system, putative AMC99_RS04875 f266c02510dc9a46f42ffafcc2dc6c41 696 SUPERFAMILY SSF55874 554 678 2.62E-29 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS04875 f266c02510dc9a46f42ffafcc2dc6c41 696 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 679 1.0E-16 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS04875 f266c02510dc9a46f42ffafcc2dc6c41 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 664 677 8.5E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS04875 f266c02510dc9a46f42ffafcc2dc6c41 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 639 8.5E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS04875 f266c02510dc9a46f42ffafcc2dc6c41 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 658 8.5E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS04875 f266c02510dc9a46f42ffafcc2dc6c41 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 624 8.5E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS02535 1184833253bf7a724be9b3e4ec92aada 81 SMART SM00316 4 70 0.0012 T 20-04-2016 IPR022967 RNA-binding domain, S1 AMC99_RS02535 1184833253bf7a724be9b3e4ec92aada 81 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 75 25.652 T 20-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMC99_RS02535 1184833253bf7a724be9b3e4ec92aada 81 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.3E-31 T 20-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMC99_RS02535 1184833253bf7a724be9b3e4ec92aada 81 Gene3D G3DSA:2.40.50.140 1 71 1.0E-36 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS02535 1184833253bf7a724be9b3e4ec92aada 81 PANTHER PTHR33370 1 71 3.8E-39 T 20-04-2016 AMC99_RS02535 1184833253bf7a724be9b3e4ec92aada 81 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 5.5E-27 T 20-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AMC99_RS02535 1184833253bf7a724be9b3e4ec92aada 81 SUPERFAMILY SSF50249 1 74 7.1E-27 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS04485 df396480c42a411006e0096a28ceff66 203 SUPERFAMILY SSF52833 9 88 2.66E-21 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS04485 df396480c42a411006e0096a28ceff66 203 PANTHER PTHR11260:SF238 10 200 4.1E-39 T 20-04-2016 AMC99_RS04485 df396480c42a411006e0096a28ceff66 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 125 199 8.8E-12 T 20-04-2016 IPR004046 Glutathione S-transferase, C-terminal AMC99_RS04485 df396480c42a411006e0096a28ceff66 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 11 81 6.3E-17 T 20-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_RS04485 df396480c42a411006e0096a28ceff66 203 PANTHER PTHR11260 10 200 4.1E-39 T 20-04-2016 AMC99_RS04485 df396480c42a411006e0096a28ceff66 203 Gene3D G3DSA:1.20.1050.10 91 202 6.4E-19 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS04485 df396480c42a411006e0096a28ceff66 203 Gene3D G3DSA:3.40.30.10 10 90 1.6E-26 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS04485 df396480c42a411006e0096a28ceff66 203 SUPERFAMILY SSF47616 79 202 1.1E-24 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 Pfam PF02772 S-adenosylmethionine synthetase, central domain 133 252 1.2E-36 T 20-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 PANTHER PTHR11964 81 404 3.9E-183 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 PANTHER PTHR11964 1 61 3.9E-183 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 118 8.6E-36 T 20-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 Gene3D G3DSA:3.30.300.10 12 151 1.2E-36 T 20-04-2016 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 409 47.535 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 SUPERFAMILY SSF55973 254 408 5.89E-60 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 PANTHER PTHR11964:SF1 81 404 3.9E-183 T 20-04-2016 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 PANTHER PTHR11964:SF1 1 61 3.9E-183 T 20-04-2016 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 84 408 2.0E-119 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 SUPERFAMILY SSF55973 129 252 1.06E-40 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 254 398 1.0E-60 T 20-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 134 144 - T 20-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 Gene3D G3DSA:3.30.300.10 152 254 3.3E-32 T 20-04-2016 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 PIRSF PIRSF000497 1 410 5.8E-149 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 SUPERFAMILY SSF55973 4 126 7.06E-35 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 Gene3D G3DSA:3.30.300.10 265 408 5.7E-62 T 20-04-2016 AMC99_RS13565 e0074f4f616625f9f5cebd2fdf5bab6b 410 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 280 288 - T 20-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMC99_RS10170 2fdd561f13c2f6fb7cd527cadec8f7d1 386 Gene3D G3DSA:3.20.20.70 26 379 2.5E-116 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS10170 2fdd561f13c2f6fb7cd527cadec8f7d1 386 PIRSF PIRSF000138 12 386 4.7E-110 T 20-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AMC99_RS10170 2fdd561f13c2f6fb7cd527cadec8f7d1 386 PANTHER PTHR10578:SF79 9 376 1.5E-133 T 20-04-2016 AMC99_RS10170 2fdd561f13c2f6fb7cd527cadec8f7d1 386 Pfam PF01070 FMN-dependent dehydrogenase 34 379 9.7E-108 T 20-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 AMC99_RS10170 2fdd561f13c2f6fb7cd527cadec8f7d1 386 SUPERFAMILY SSF51395 27 378 1.36E-81 T 20-04-2016 AMC99_RS10170 2fdd561f13c2f6fb7cd527cadec8f7d1 386 PANTHER PTHR10578 9 376 1.5E-133 T 20-04-2016 AMC99_RS10170 2fdd561f13c2f6fb7cd527cadec8f7d1 386 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 282 288 - T 20-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AMC99_RS06055 dfe35f3b9df4b25b4cbcbd0e95620efe 257 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 257 35.215 T 20-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AMC99_RS06055 dfe35f3b9df4b25b4cbcbd0e95620efe 257 Gene3D G3DSA:3.30.420.40 96 255 7.9E-49 T 20-04-2016 AMC99_RS06055 dfe35f3b9df4b25b4cbcbd0e95620efe 257 SUPERFAMILY SSF53067 125 254 1.3E-38 T 20-04-2016 AMC99_RS06055 dfe35f3b9df4b25b4cbcbd0e95620efe 257 Gene3D G3DSA:3.30.420.40 2 60 8.0E-4 T 20-04-2016 AMC99_RS06055 dfe35f3b9df4b25b4cbcbd0e95620efe 257 SUPERFAMILY SSF53067 1 122 1.53E-33 T 20-04-2016 AMC99_RS06055 dfe35f3b9df4b25b4cbcbd0e95620efe 257 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 253 5.0E-64 T 20-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AMC99_RS06055 dfe35f3b9df4b25b4cbcbd0e95620efe 257 Pfam PF03309 Type III pantothenate kinase 2 208 6.0E-67 T 20-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AMC99_RS06055 dfe35f3b9df4b25b4cbcbd0e95620efe 257 PANTHER PTHR34265 1 257 8.9E-62 T 20-04-2016 AMC99_RS01820 fd8457a00d8cd15919b1c7287cdd55be 516 SUPERFAMILY SSF52096 3 262 4.11E-43 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS01820 fd8457a00d8cd15919b1c7287cdd55be 516 PANTHER PTHR22855:SF40 4 508 7.1E-132 T 20-04-2016 AMC99_RS01820 fd8457a00d8cd15919b1c7287cdd55be 516 Gene3D G3DSA:3.90.226.10 5 263 2.8E-40 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS01820 fd8457a00d8cd15919b1c7287cdd55be 516 Gene3D G3DSA:3.90.226.10 267 504 3.9E-53 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS01820 fd8457a00d8cd15919b1c7287cdd55be 516 SUPERFAMILY SSF52096 231 503 1.39E-60 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS01820 fd8457a00d8cd15919b1c7287cdd55be 516 PANTHER PTHR22855 4 508 7.1E-132 T 20-04-2016 AMC99_RS01820 fd8457a00d8cd15919b1c7287cdd55be 516 Pfam PF01039 Carboxyl transferase domain 28 511 5.0E-75 T 20-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS04290 ae75fa579c7e035b9a3de5510a837112 463 Gene3D G3DSA:3.40.50.2000 2 242 2.5E-75 T 20-04-2016 AMC99_RS04290 ae75fa579c7e035b9a3de5510a837112 463 SUPERFAMILY SSF53756 3 457 3.33E-143 T 20-04-2016 AMC99_RS04290 ae75fa579c7e035b9a3de5510a837112 463 PANTHER PTHR10788 1 456 1.5E-168 T 20-04-2016 AMC99_RS04290 ae75fa579c7e035b9a3de5510a837112 463 PANTHER PTHR10788:SF6 1 456 1.5E-168 T 20-04-2016 AMC99_RS04290 ae75fa579c7e035b9a3de5510a837112 463 Pfam PF00982 Glycosyltransferase family 20 20 457 1.5E-127 T 20-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 AMC99_RS04290 ae75fa579c7e035b9a3de5510a837112 463 Gene3D G3DSA:3.40.50.2000 243 438 1.1E-65 T 20-04-2016 AMC99_RS04940 226ae017a6e9a6a873f2f078e422df38 1177 Pfam PF02811 PHP domain 35 148 3.6E-6 T 20-04-2016 IPR004013 PHP domain GO:0003824 AMC99_RS04940 226ae017a6e9a6a873f2f078e422df38 1177 Gene3D G3DSA:3.20.20.140 41 292 4.0E-6 T 20-04-2016 AMC99_RS04940 226ae017a6e9a6a873f2f078e422df38 1177 Gene3D G3DSA:2.40.50.140 1011 1084 7.7E-4 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS04940 226ae017a6e9a6a873f2f078e422df38 1177 PANTHER PTHR32294:SF4 24 1152 0.0 T 20-04-2016 AMC99_RS04940 226ae017a6e9a6a873f2f078e422df38 1177 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 28 1177 13.346 T 20-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS04940 226ae017a6e9a6a873f2f078e422df38 1177 PANTHER PTHR32294 24 1152 0.0 T 20-04-2016 AMC99_RS04940 226ae017a6e9a6a873f2f078e422df38 1177 Gene3D G3DSA:1.10.150.280 876 923 7.4E-4 T 20-04-2016 AMC99_RS04940 226ae017a6e9a6a873f2f078e422df38 1177 Pfam PF14579 Helix-hairpin-helix motif 835 936 7.1E-24 T 20-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS04940 226ae017a6e9a6a873f2f078e422df38 1177 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 328 761 1.5E-140 T 20-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS04940 226ae017a6e9a6a873f2f078e422df38 1177 SMART SM00481 29 96 1.5E-4 T 20-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AMC99_RS04940 226ae017a6e9a6a873f2f078e422df38 1177 Pfam PF01336 OB-fold nucleic acid binding domain 1021 1094 2.0E-7 T 20-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMC99_RS04940 226ae017a6e9a6a873f2f078e422df38 1177 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 222 1056 3.4E-154 T 20-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS01205 be314e998fdf8f8e98946673de43ae81 152 PANTHER PTHR11241 20 147 5.3E-54 T 20-04-2016 AMC99_RS01205 be314e998fdf8f8e98946673de43ae81 152 SUPERFAMILY SSF51283 6 147 1.44E-53 T 20-04-2016 IPR029054 dUTPase-like AMC99_RS01205 be314e998fdf8f8e98946673de43ae81 152 PANTHER PTHR11241:SF0 20 147 5.3E-54 T 20-04-2016 AMC99_RS01205 be314e998fdf8f8e98946673de43ae81 152 Gene3D G3DSA:2.70.40.10 9 147 6.8E-59 T 20-04-2016 IPR029054 dUTPase-like AMC99_RS01205 be314e998fdf8f8e98946673de43ae81 152 Pfam PF00692 dUTPase 19 147 3.1E-36 T 20-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 AMC99_RS01205 be314e998fdf8f8e98946673de43ae81 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 147 1.0E-54 T 20-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 AMC99_RS01205 be314e998fdf8f8e98946673de43ae81 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 148 34.029 T 20-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 AMC99_RS06335 5066dd59f90e598cdeea99e828fb772c 408 PANTHER PTHR11482 14 391 4.0E-76 T 20-04-2016 AMC99_RS06335 5066dd59f90e598cdeea99e828fb772c 408 Gene3D G3DSA:3.20.20.10 44 273 2.3E-57 T 20-04-2016 IPR029066 PLP-binding barrel AMC99_RS06335 5066dd59f90e598cdeea99e828fb772c 408 Gene3D G3DSA:2.40.37.10 274 407 1.1E-27 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMC99_RS06335 5066dd59f90e598cdeea99e828fb772c 408 TIGRFAM TIGR03099 dCO2ase_PEP1: pyridoxal-dependent decarboxylase, exosortase A system-associated 12 408 5.9E-178 T 20-04-2016 IPR017530 Pyridoxal-dependent decarboxylase, exosortase system type 1 associated AMC99_RS06335 5066dd59f90e598cdeea99e828fb772c 408 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 229 246 - T 20-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 AMC99_RS06335 5066dd59f90e598cdeea99e828fb772c 408 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 47 291 4.0E-33 T 20-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 AMC99_RS06335 5066dd59f90e598cdeea99e828fb772c 408 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 194 207 3.4E-10 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMC99_RS06335 5066dd59f90e598cdeea99e828fb772c 408 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 84 96 3.4E-10 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMC99_RS06335 5066dd59f90e598cdeea99e828fb772c 408 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 281 300 3.4E-10 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMC99_RS06335 5066dd59f90e598cdeea99e828fb772c 408 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 64 82 3.4E-10 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMC99_RS06335 5066dd59f90e598cdeea99e828fb772c 408 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 297 403 2.4E-11 T 20-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 AMC99_RS06335 5066dd59f90e598cdeea99e828fb772c 408 PANTHER PTHR11482:SF5 14 391 4.0E-76 T 20-04-2016 AMC99_RS06335 5066dd59f90e598cdeea99e828fb772c 408 SUPERFAMILY SSF50621 273 408 2.72E-31 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMC99_RS06335 5066dd59f90e598cdeea99e828fb772c 408 SUPERFAMILY SSF51419 34 293 8.43E-63 T 20-04-2016 IPR029066 PLP-binding barrel AMC99_RS03725 5a27f24d4a3a9b6be67ad0402b57dda1 310 Gene3D G3DSA:3.60.15.10 31 275 1.4E-50 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS03725 5a27f24d4a3a9b6be67ad0402b57dda1 310 SUPERFAMILY SSF56281 36 276 8.26E-50 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS03725 5a27f24d4a3a9b6be67ad0402b57dda1 310 PANTHER PTHR11935 1 305 1.2E-116 T 20-04-2016 AMC99_RS03725 5a27f24d4a3a9b6be67ad0402b57dda1 310 Pfam PF00753 Metallo-beta-lactamase superfamily 37 227 2.1E-22 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS03725 5a27f24d4a3a9b6be67ad0402b57dda1 310 SMART SM00849 37 227 1.7E-25 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS03725 5a27f24d4a3a9b6be67ad0402b57dda1 310 PANTHER PTHR11935:SF110 1 305 1.2E-116 T 20-04-2016 AMC99_RS13650 54f360ab6c49f97e4985e9e99feaba45 110 PANTHER PTHR11961:SF6 23 107 8.0E-25 T 20-04-2016 AMC99_RS13650 54f360ab6c49f97e4985e9e99feaba45 110 PANTHER PTHR11961 23 107 8.0E-25 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMC99_RS13650 54f360ab6c49f97e4985e9e99feaba45 110 PRINTS PR00604 Class IA and IB cytochrome C signature 83 93 7.7E-19 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMC99_RS13650 54f360ab6c49f97e4985e9e99feaba45 110 PRINTS PR00604 Class IA and IB cytochrome C signature 64 80 7.7E-19 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMC99_RS13650 54f360ab6c49f97e4985e9e99feaba45 110 PRINTS PR00604 Class IA and IB cytochrome C signature 100 108 7.7E-19 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMC99_RS13650 54f360ab6c49f97e4985e9e99feaba45 110 PRINTS PR00604 Class IA and IB cytochrome C signature 22 29 7.7E-19 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMC99_RS13650 54f360ab6c49f97e4985e9e99feaba45 110 PRINTS PR00604 Class IA and IB cytochrome C signature 34 49 7.7E-19 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMC99_RS13650 54f360ab6c49f97e4985e9e99feaba45 110 SUPERFAMILY SSF46626 18 110 6.0E-26 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS13650 54f360ab6c49f97e4985e9e99feaba45 110 Pfam PF00034 Cytochrome c 19 110 1.4E-5 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS13650 54f360ab6c49f97e4985e9e99feaba45 110 Gene3D G3DSA:1.10.760.10 18 109 1.4E-33 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS12375 661884e6bdaf04b70c7be8878cd9ca3f 198 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 4 197 25.214 T 20-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 AMC99_RS12375 661884e6bdaf04b70c7be8878cd9ca3f 198 Pfam PF01121 Dephospho-CoA kinase 6 176 1.7E-41 T 20-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 AMC99_RS12375 661884e6bdaf04b70c7be8878cd9ca3f 198 SUPERFAMILY SSF52540 4 193 7.94E-33 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12375 661884e6bdaf04b70c7be8878cd9ca3f 198 PANTHER PTHR10695 1 191 4.3E-51 T 20-04-2016 AMC99_RS12375 661884e6bdaf04b70c7be8878cd9ca3f 198 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 6 188 4.2E-37 T 20-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 AMC99_RS12375 661884e6bdaf04b70c7be8878cd9ca3f 198 Gene3D G3DSA:3.40.50.300 1 195 4.5E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08070 df81dc9a4706543c58f737aeb3e1ac54 721 SMART SM00490 491 584 2.9E-4 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS08070 df81dc9a4706543c58f737aeb3e1ac54 721 Gene3D G3DSA:3.40.50.300 188 373 7.0E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08070 df81dc9a4706543c58f737aeb3e1ac54 721 SUPERFAMILY SSF52540 182 368 1.03E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08070 df81dc9a4706543c58f737aeb3e1ac54 721 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 720 23.303 T 20-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AMC99_RS08070 df81dc9a4706543c58f737aeb3e1ac54 721 Gene3D G3DSA:3.40.50.300 400 422 1.3E-28 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08070 df81dc9a4706543c58f737aeb3e1ac54 721 Gene3D G3DSA:3.40.50.300 488 627 1.3E-28 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08070 df81dc9a4706543c58f737aeb3e1ac54 721 Pfam PF00271 Helicase conserved C-terminal domain 502 583 6.5E-5 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS08070 df81dc9a4706543c58f737aeb3e1ac54 721 PANTHER PTHR30580 16 721 1.0E-204 T 20-04-2016 AMC99_RS08070 df81dc9a4706543c58f737aeb3e1ac54 721 Pfam PF00270 DEAD/DEAH box helicase 213 355 3.1E-14 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_RS08070 df81dc9a4706543c58f737aeb3e1ac54 721 TIGRFAM TIGR00595 priA: primosomal protein N' 213 718 5.9E-186 T 20-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AMC99_RS08070 df81dc9a4706543c58f737aeb3e1ac54 721 SMART SM00487 185 384 4.5E-23 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_RS08070 df81dc9a4706543c58f737aeb3e1ac54 721 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 307 316 - T 20-04-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 AMC99_RS08070 df81dc9a4706543c58f737aeb3e1ac54 721 SUPERFAMILY SSF52540 490 605 7.79E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08070 df81dc9a4706543c58f737aeb3e1ac54 721 SUPERFAMILY SSF52540 213 262 7.79E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07955 ceb5b1267640898eacf99cb788df24d4 229 Gene3D G3DSA:3.40.30.10 33 225 5.7E-28 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS07955 ceb5b1267640898eacf99cb788df24d4 229 Pfam PF13462 Thioredoxin 38 225 2.9E-24 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS07955 ceb5b1267640898eacf99cb788df24d4 229 SUPERFAMILY SSF52833 31 225 1.29E-25 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS07750 f3a4fa47bb664fcdd84d4b064e95fa51 182 PANTHER PTHR10057 1 178 1.9E-32 T 20-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 AMC99_RS07750 f3a4fa47bb664fcdd84d4b064e95fa51 182 PIRSF PIRSF005859 9 166 6.1E-37 T 20-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 AMC99_RS07750 f3a4fa47bb664fcdd84d4b064e95fa51 182 Pfam PF03073 TspO/MBR family 24 161 5.9E-34 T 20-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 AMC99_RS09830 d23790f1911c431cf0bcd66e5d26bf3b 442 Gene3D G3DSA:1.25.40.10 32 187 1.9E-20 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS09830 d23790f1911c431cf0bcd66e5d26bf3b 442 PANTHER PTHR23083 40 189 3.1E-12 T 20-04-2016 AMC99_RS09830 d23790f1911c431cf0bcd66e5d26bf3b 442 SUPERFAMILY SSF110997 347 420 3.01E-6 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMC99_RS09830 d23790f1911c431cf0bcd66e5d26bf3b 442 Gene3D G3DSA:3.30.70.1070 343 417 9.4E-6 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMC99_RS09830 d23790f1911c431cf0bcd66e5d26bf3b 442 SUPERFAMILY SSF48452 36 188 2.85E-17 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS09830 d23790f1911c431cf0bcd66e5d26bf3b 442 Pfam PF05036 Sporulation related domain 347 422 3.9E-8 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMC99_RS09830 d23790f1911c431cf0bcd66e5d26bf3b 442 SMART SM00028 36 69 4.4 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS09830 d23790f1911c431cf0bcd66e5d26bf3b 442 SMART SM00028 167 200 250.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS09830 d23790f1911c431cf0bcd66e5d26bf3b 442 SMART SM00028 70 103 12.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS06470 48f2a6940a90a404564cc5dc7e695acc 490 SUPERFAMILY SSF53271 254 472 1.85E-72 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like AMC99_RS06470 48f2a6940a90a404564cc5dc7e695acc 490 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 19 466 2.7E-148 T 20-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AMC99_RS06470 48f2a6940a90a404564cc5dc7e695acc 490 Gene3D G3DSA:3.60.20.10 19 262 3.6E-63 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS06470 48f2a6940a90a404564cc5dc7e695acc 490 PIRSF PIRSF000485 15 481 4.0E-163 T 20-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AMC99_RS06470 48f2a6940a90a404564cc5dc7e695acc 490 PANTHER PTHR11907 16 479 1.6E-218 T 20-04-2016 AMC99_RS06470 48f2a6940a90a404564cc5dc7e695acc 490 Pfam PF00156 Phosphoribosyl transferase domain 289 391 2.7E-8 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMC99_RS06470 48f2a6940a90a404564cc5dc7e695acc 490 Pfam PF13537 Glutamine amidotransferase domain 102 216 5.2E-23 T 20-04-2016 IPR017932 Glutamine amidotransferase type 2 domain AMC99_RS06470 48f2a6940a90a404564cc5dc7e695acc 490 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 18 467 45.713 T 20-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AMC99_RS06470 48f2a6940a90a404564cc5dc7e695acc 490 SUPERFAMILY SSF56235 19 242 5.58E-66 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS06470 48f2a6940a90a404564cc5dc7e695acc 490 Gene3D G3DSA:3.40.50.2020 275 442 9.3E-42 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like AMC99_RS06470 48f2a6940a90a404564cc5dc7e695acc 490 PANTHER PTHR11907:SF0 16 479 1.6E-218 T 20-04-2016 AMC99_RS02780 ffe5efda9de199e67ddae87813392bdd 144 Pfam PF06170 Protein of unknown function (DUF983) 38 122 2.1E-26 T 20-04-2016 IPR009325 Protein of unknown function DUF983 AMC99_RS00800 0cd41c4d727557d3a031e33ef7bb8730 189 Pfam PF03358 NADPH-dependent FMN reductase 3 142 1.4E-21 T 20-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMC99_RS00800 0cd41c4d727557d3a031e33ef7bb8730 189 Gene3D G3DSA:3.40.50.360 1 182 3.4E-40 T 20-04-2016 IPR029039 Flavoprotein-like domain AMC99_RS00800 0cd41c4d727557d3a031e33ef7bb8730 189 PANTHER PTHR30543 1 178 4.8E-18 T 20-04-2016 AMC99_RS00800 0cd41c4d727557d3a031e33ef7bb8730 189 SUPERFAMILY SSF52218 3 176 1.31E-26 T 20-04-2016 IPR029039 Flavoprotein-like domain AMC99_RS03650 316f344270e834414f0226e5b088f65b 482 Gene3D G3DSA:1.20.1250.20 244 458 1.9E-5 T 20-04-2016 AMC99_RS03650 316f344270e834414f0226e5b088f65b 482 Gene3D G3DSA:1.20.1250.20 28 211 4.5E-11 T 20-04-2016 AMC99_RS03650 316f344270e834414f0226e5b088f65b 482 PANTHER PTHR11328 1 466 1.4E-39 T 20-04-2016 AMC99_RS03650 316f344270e834414f0226e5b088f65b 482 PANTHER PTHR11328:SF24 1 466 1.4E-39 T 20-04-2016 AMC99_RS03650 316f344270e834414f0226e5b088f65b 482 SUPERFAMILY SSF103473 22 458 1.18E-22 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS03650 316f344270e834414f0226e5b088f65b 482 Pfam PF13347 MFS/sugar transport protein 21 461 2.0E-67 T 20-04-2016 AMC99_RS01465 1ecaf50733e552fa65a2ba243c715ec1 356 Pfam PF01636 Phosphotransferase enzyme family 80 277 1.7E-16 T 20-04-2016 IPR002575 Aminoglycoside phosphotransferase AMC99_RS01465 1ecaf50733e552fa65a2ba243c715ec1 356 SMART SM00587 117 294 7.1E-4 T 20-04-2016 IPR015897 CHK kinase-like AMC99_RS01465 1ecaf50733e552fa65a2ba243c715ec1 356 Gene3D G3DSA:3.90.1200.10 137 341 6.2E-21 T 20-04-2016 AMC99_RS01465 1ecaf50733e552fa65a2ba243c715ec1 356 PANTHER PTHR11012 9 290 2.3E-21 T 20-04-2016 AMC99_RS01465 1ecaf50733e552fa65a2ba243c715ec1 356 SUPERFAMILY SSF56112 7 289 5.54E-30 T 20-04-2016 IPR011009 Protein kinase-like domain AMC99_RS10230 6d885d9f75765c9a7fcd4026ab385858 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 61 1.8E-12 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS10230 6d885d9f75765c9a7fcd4026ab385858 211 PANTHER PTHR30055:SF73 1 167 2.4E-14 T 20-04-2016 AMC99_RS10230 6d885d9f75765c9a7fcd4026ab385858 211 PANTHER PTHR30055 1 167 2.4E-14 T 20-04-2016 AMC99_RS10230 6d885d9f75765c9a7fcd4026ab385858 211 SUPERFAMILY SSF46689 14 82 3.13E-13 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS10230 6d885d9f75765c9a7fcd4026ab385858 211 Gene3D G3DSA:1.10.357.10 16 209 1.4E-23 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMC99_RS10500 73b1433e536a86fe52378877a05dbc0c 382 Gene3D G3DSA:1.10.443.10 206 370 8.5E-20 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_RS10500 73b1433e536a86fe52378877a05dbc0c 382 Gene3D G3DSA:1.10.150.130 92 178 1.6E-5 T 20-04-2016 IPR023109 Integrase/recombinase, N-terminal AMC99_RS10500 73b1433e536a86fe52378877a05dbc0c 382 SUPERFAMILY SSF56349 91 372 1.29E-49 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMC99_RS10500 73b1433e536a86fe52378877a05dbc0c 382 Pfam PF13356 Domain of unknown function (DUF4102) 4 86 4.2E-13 T 20-04-2016 IPR025166 Domain of unknown function DUF4102 AMC99_RS10500 73b1433e536a86fe52378877a05dbc0c 382 Pfam PF00589 Phage integrase family 206 362 1.1E-13 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_RS10500 73b1433e536a86fe52378877a05dbc0c 382 PANTHER PTHR30629 1 378 5.7E-65 T 20-04-2016 AMC99_RS08255 dbc2432fe331de2c9fb99fc083ba34f0 269 PANTHER PTHR31088 42 257 4.3E-64 T 20-04-2016 AMC99_RS08255 dbc2432fe331de2c9fb99fc083ba34f0 269 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 41 260 1.8E-83 T 20-04-2016 IPR014319 Phage shock protein, PspA AMC99_RS08255 dbc2432fe331de2c9fb99fc083ba34f0 269 Pfam PF04012 PspA/IM30 family 42 260 1.3E-34 T 20-04-2016 IPR007157 PspA/IM30 AMC99_RS08255 dbc2432fe331de2c9fb99fc083ba34f0 269 PANTHER PTHR31088:SF7 42 257 4.3E-64 T 20-04-2016 AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 Gene3D G3DSA:3.30.70.260 836 905 5.7E-10 T 20-04-2016 AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 Gene3D G3DSA:3.30.70.260 728 798 2.4E-9 T 20-04-2016 AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 SUPERFAMILY SSF109604 453 579 1.13E-16 T 20-04-2016 AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 Gene3D G3DSA:3.30.460.10 74 116 0.001 T 20-04-2016 AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 SUPERFAMILY SSF81301 23 198 8.41E-31 T 20-04-2016 AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 SUPERFAMILY SSF81593 228 336 4.87E-9 T 20-04-2016 AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 Gene3D G3DSA:1.10.3210.10 460 647 6.9E-28 T 20-04-2016 IPR006674 HD domain AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 SMART SM00471 486 633 1.0E-6 T 20-04-2016 IPR003607 HD/PDEase domain AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 SUPERFAMILY SSF55021 726 797 1.12E-10 T 20-04-2016 AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 921 274.807 T 20-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 Gene3D G3DSA:3.30.460.10 117 190 3.3E-5 T 20-04-2016 AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 77 907 1.3E-265 T 20-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 SUPERFAMILY SSF55021 836 909 4.16E-9 T 20-04-2016 AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 PANTHER PTHR13734:SF45 136 716 4.9E-94 T 20-04-2016 AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 Pfam PF01966 HD domain 491 619 2.7E-11 T 20-04-2016 IPR006674 HD domain AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 Pfam PF08335 GlnD PII-uridylyltransferase 208 346 5.6E-36 T 20-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 PIRSF PIRSF006288 25 916 9.8E-299 T 20-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMC99_RS11345 bcb8a7cc94bcc3072e7469140fcf17cc 921 PANTHER PTHR13734 136 716 4.9E-94 T 20-04-2016 AMC99_RS06910 28d78329e164fcff40fb6e8a86bb7bc7 167 Pfam PF05239 PRC-barrel domain 90 150 2.9E-5 T 20-04-2016 IPR027275 PRC-barrel domain AMC99_RS06910 28d78329e164fcff40fb6e8a86bb7bc7 167 Gene3D G3DSA:2.30.30.240 93 162 1.7E-11 T 20-04-2016 AMC99_RS06910 28d78329e164fcff40fb6e8a86bb7bc7 167 SUPERFAMILY SSF50447 6 87 1.27E-10 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain AMC99_RS06910 28d78329e164fcff40fb6e8a86bb7bc7 167 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 6 156 1.8E-32 T 20-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMC99_RS06910 28d78329e164fcff40fb6e8a86bb7bc7 167 Gene3D G3DSA:2.40.30.60 2 87 1.7E-12 T 20-04-2016 IPR002676 RimM protein GO:0006364 AMC99_RS06910 28d78329e164fcff40fb6e8a86bb7bc7 167 Pfam PF01782 RimM N-terminal domain 8 83 1.4E-13 T 20-04-2016 IPR002676 RimM protein GO:0006364 AMC99_RS06910 28d78329e164fcff40fb6e8a86bb7bc7 167 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 5 166 17.068 T 20-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMC99_RS06910 28d78329e164fcff40fb6e8a86bb7bc7 167 SUPERFAMILY SSF50346 93 164 4.32E-12 T 20-04-2016 IPR011033 PRC-barrel-like AMC99_RS06910 28d78329e164fcff40fb6e8a86bb7bc7 167 PANTHER PTHR33692 8 156 2.8E-29 T 20-04-2016 AMC99_RS07525 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 PANTHER PTHR11880 1 89 2.6E-46 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07525 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 Pfam PF00203 Ribosomal protein S19 3 83 1.8E-37 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07525 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 8.9E-43 T 20-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMC99_RS07525 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 SUPERFAMILY SSF54570 3 84 3.92E-34 T 20-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 AMC99_RS07525 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 Gene3D G3DSA:3.30.860.10 1 90 2.6E-42 T 20-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 AMC99_RS07525 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 20-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 AMC99_RS07525 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.79 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07525 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 PIRSF PIRSF002144 1 91 2.2E-34 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07525 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.1E-22 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07525 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.1E-22 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07525 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.1E-22 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMC99_RS04510 471eb3a5342a41a37161080969c6bdb9 123 PANTHER PTHR11586 11 123 1.0E-30 T 20-04-2016 AMC99_RS04510 471eb3a5342a41a37161080969c6bdb9 123 SUPERFAMILY SSF50249 14 122 7.83E-30 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS04510 471eb3a5342a41a37161080969c6bdb9 123 Gene3D G3DSA:2.40.50.140 12 122 2.4E-33 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS04510 471eb3a5342a41a37161080969c6bdb9 123 Pfam PF01588 Putative tRNA binding domain 25 120 7.3E-12 T 20-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 AMC99_RS04510 471eb3a5342a41a37161080969c6bdb9 123 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 18 122 1.7E-41 T 20-04-2016 IPR008231 Probable chaperone CsaA AMC99_RS12290 2b387596fe081053f6598b47e0240482 252 Pfam PF04397 LytTr DNA-binding domain 150 249 6.4E-17 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 AMC99_RS12290 2b387596fe081053f6598b47e0240482 252 Pfam PF00072 Response regulator receiver domain 14 122 9.6E-26 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS12290 2b387596fe081053f6598b47e0240482 252 Gene3D G3DSA:3.40.50.2300 6 134 2.2E-35 T 20-04-2016 AMC99_RS12290 2b387596fe081053f6598b47e0240482 252 Gene3D G3DSA:2.40.50.40 143 210 1.7E-11 T 20-04-2016 AMC99_RS12290 2b387596fe081053f6598b47e0240482 252 PANTHER PTHR26402 11 124 8.8E-30 T 20-04-2016 AMC99_RS12290 2b387596fe081053f6598b47e0240482 252 SMART SM00448 11 122 1.3E-28 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS12290 2b387596fe081053f6598b47e0240482 252 SMART SM00850 149 251 1.5E-22 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 AMC99_RS12290 2b387596fe081053f6598b47e0240482 252 PANTHER PTHR26402:SF501 11 124 8.8E-30 T 20-04-2016 AMC99_RS12290 2b387596fe081053f6598b47e0240482 252 SUPERFAMILY SSF52172 10 141 6.97E-34 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS08155 8611d676bfaa7c7addb07e4c7cf61ddc 702 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 25 423 3.0E-40 T 20-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AMC99_RS08155 8611d676bfaa7c7addb07e4c7cf61ddc 702 PANTHER PTHR11757 25 702 1.6E-224 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_RS08155 8611d676bfaa7c7addb07e4c7cf61ddc 702 PANTHER PTHR11757:SF13 25 702 1.6E-224 T 20-04-2016 AMC99_RS08155 8611d676bfaa7c7addb07e4c7cf61ddc 702 SUPERFAMILY SSF50993 26 434 1.86E-52 T 20-04-2016 AMC99_RS08155 8611d676bfaa7c7addb07e4c7cf61ddc 702 Pfam PF00326 Prolyl oligopeptidase family 494 693 1.2E-44 T 20-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMC99_RS08155 8611d676bfaa7c7addb07e4c7cf61ddc 702 Gene3D G3DSA:3.40.50.1820 364 695 2.9E-87 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS08155 8611d676bfaa7c7addb07e4c7cf61ddc 702 SUPERFAMILY SSF53474 439 679 3.85E-49 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS08155 8611d676bfaa7c7addb07e4c7cf61ddc 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 521 4.1E-43 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_RS08155 8611d676bfaa7c7addb07e4c7cf61ddc 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 555 575 4.1E-43 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_RS08155 8611d676bfaa7c7addb07e4c7cf61ddc 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 629 651 4.1E-43 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_RS08155 8611d676bfaa7c7addb07e4c7cf61ddc 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 525 544 4.1E-43 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_RS08155 8611d676bfaa7c7addb07e4c7cf61ddc 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 610 625 4.1E-43 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_RS08155 8611d676bfaa7c7addb07e4c7cf61ddc 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 470 488 4.1E-43 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_RS00715 912352ebb8052545e71b72d1d63dc88d 420 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 140 234 3.8E-20 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS00715 912352ebb8052545e71b72d1d63dc88d 420 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 136 8.1E-19 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS00715 912352ebb8052545e71b72d1d63dc88d 420 Gene3D G3DSA:2.40.110.10 139 242 9.7E-40 T 20-04-2016 AMC99_RS00715 912352ebb8052545e71b72d1d63dc88d 420 PANTHER PTHR10909 1 420 1.3E-218 T 20-04-2016 AMC99_RS00715 912352ebb8052545e71b72d1d63dc88d 420 SUPERFAMILY SSF47203 251 410 1.08E-41 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS00715 912352ebb8052545e71b72d1d63dc88d 420 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 253 401 9.2E-37 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS00715 912352ebb8052545e71b72d1d63dc88d 420 SUPERFAMILY SSF56645 1 266 6.28E-70 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS00715 912352ebb8052545e71b72d1d63dc88d 420 Gene3D G3DSA:1.10.540.10 1 138 6.3E-37 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS00715 912352ebb8052545e71b72d1d63dc88d 420 PANTHER PTHR10909:SF329 1 420 1.3E-218 T 20-04-2016 AMC99_RS00715 912352ebb8052545e71b72d1d63dc88d 420 Gene3D G3DSA:1.20.140.10 243 409 1.6E-46 T 20-04-2016 AMC99_RS00750 30d73be1bf5e5e2f817532b4056178fa 297 PANTHER PTHR30537:SF3 1 288 1.8E-67 T 20-04-2016 AMC99_RS00750 30d73be1bf5e5e2f817532b4056178fa 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.5E-15 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_RS00750 30d73be1bf5e5e2f817532b4056178fa 297 Gene3D G3DSA:3.40.190.10 174 244 2.5E-6 T 20-04-2016 AMC99_RS00750 30d73be1bf5e5e2f817532b4056178fa 297 Gene3D G3DSA:1.10.10.10 3 78 3.8E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS00750 30d73be1bf5e5e2f817532b4056178fa 297 SUPERFAMILY SSF53850 88 288 3.88E-34 T 20-04-2016 AMC99_RS00750 30d73be1bf5e5e2f817532b4056178fa 297 Pfam PF03466 LysR substrate binding domain 88 285 1.3E-31 T 20-04-2016 IPR005119 LysR, substrate-binding AMC99_RS00750 30d73be1bf5e5e2f817532b4056178fa 297 Gene3D G3DSA:3.40.190.10 91 173 1.7E-18 T 20-04-2016 AMC99_RS00750 30d73be1bf5e5e2f817532b4056178fa 297 PANTHER PTHR30537 1 288 1.8E-67 T 20-04-2016 AMC99_RS00750 30d73be1bf5e5e2f817532b4056178fa 297 SUPERFAMILY SSF46785 3 110 1.15E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS10975 f553e3edc65f3a8b3f3281a4cb168484 369 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 2 366 46.338 T 20-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 AMC99_RS10975 f553e3edc65f3a8b3f3281a4cb168484 369 Gene3D G3DSA:3.40.50.1820 24 198 3.5E-36 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS10975 f553e3edc65f3a8b3f3281a4cb168484 369 Gene3D G3DSA:3.40.50.1820 234 364 3.5E-36 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS10975 f553e3edc65f3a8b3f3281a4cb168484 369 PIRSF PIRSF000443 2 369 6.5E-136 T 20-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 AMC99_RS10975 f553e3edc65f3a8b3f3281a4cb168484 369 Pfam PF00561 alpha/beta hydrolase fold 43 351 2.0E-29 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS10975 f553e3edc65f3a8b3f3281a4cb168484 369 PANTHER PTHR32268 7 364 1.1E-164 T 20-04-2016 AMC99_RS10975 f553e3edc65f3a8b3f3281a4cb168484 369 SUPERFAMILY SSF53474 14 365 2.8E-100 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS10975 f553e3edc65f3a8b3f3281a4cb168484 369 PANTHER PTHR32268:SF11 7 364 1.1E-164 T 20-04-2016 AMC99_RS10975 f553e3edc65f3a8b3f3281a4cb168484 369 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 14 364 2.2E-135 T 20-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 AMC99_RS11770 9b438012ecd9d2181b03c5a6da89e78c 554 Gene3D G3DSA:3.60.21.10 424 527 8.8E-11 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like AMC99_RS11770 9b438012ecd9d2181b03c5a6da89e78c 554 Gene3D G3DSA:3.60.21.10 143 386 8.8E-11 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like AMC99_RS11770 9b438012ecd9d2181b03c5a6da89e78c 554 Pfam PF09423 PhoD-like phosphatase 146 523 3.8E-108 T 20-04-2016 IPR018946 Alkaline phosphatase D-related AMC99_RS11770 9b438012ecd9d2181b03c5a6da89e78c 554 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 48 135 4.2E-25 T 20-04-2016 IPR032093 Phospholipase D, N-terminal AMC99_RS11770 9b438012ecd9d2181b03c5a6da89e78c 554 SUPERFAMILY SSF56300 138 310 2.21E-25 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like AMC99_RS11770 9b438012ecd9d2181b03c5a6da89e78c 554 SUPERFAMILY SSF56300 349 380 2.21E-25 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like AMC99_RS11770 9b438012ecd9d2181b03c5a6da89e78c 554 SUPERFAMILY SSF56300 415 525 2.21E-25 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like AMC99_RS11770 9b438012ecd9d2181b03c5a6da89e78c 554 PANTHER PTHR22953:SF28 347 380 6.7E-80 T 20-04-2016 AMC99_RS11770 9b438012ecd9d2181b03c5a6da89e78c 554 PANTHER PTHR22953:SF28 46 188 6.7E-80 T 20-04-2016 AMC99_RS11770 9b438012ecd9d2181b03c5a6da89e78c 554 PANTHER PTHR22953:SF28 212 308 6.7E-80 T 20-04-2016 AMC99_RS11770 9b438012ecd9d2181b03c5a6da89e78c 554 PANTHER PTHR22953 347 380 6.7E-80 T 20-04-2016 AMC99_RS11770 9b438012ecd9d2181b03c5a6da89e78c 554 PANTHER PTHR22953 46 188 6.7E-80 T 20-04-2016 AMC99_RS11770 9b438012ecd9d2181b03c5a6da89e78c 554 PANTHER PTHR22953 212 308 6.7E-80 T 20-04-2016 AMC99_RS07830 593a6227a742cc9be68f91929cf6989d 192 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 88 7.3E-28 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMC99_RS07830 593a6227a742cc9be68f91929cf6989d 192 Pfam PF01106 NifU-like domain 124 189 4.1E-28 T 20-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AMC99_RS07830 593a6227a742cc9be68f91929cf6989d 192 Gene3D G3DSA:3.30.1370.70 1 90 2.4E-30 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMC99_RS07830 593a6227a742cc9be68f91929cf6989d 192 SUPERFAMILY SSF110836 1 90 5.49E-28 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMC99_RS07830 593a6227a742cc9be68f91929cf6989d 192 SMART SM00932 3 89 3.9E-42 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMC99_RS07830 593a6227a742cc9be68f91929cf6989d 192 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 132 189 4.0E-27 T 20-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AMC99_RS07830 593a6227a742cc9be68f91929cf6989d 192 SUPERFAMILY SSF117916 115 191 2.05E-26 T 20-04-2016 AMC99_RS07830 593a6227a742cc9be68f91929cf6989d 192 PANTHER PTHR11178:SF1 1 189 1.9E-85 T 20-04-2016 IPR017065 NFU1 iron-sulfur cluster scaffold homologue GO:0016226 AMC99_RS07830 593a6227a742cc9be68f91929cf6989d 192 PIRSF PIRSF036773 1 192 6.5E-73 T 20-04-2016 AMC99_RS07830 593a6227a742cc9be68f91929cf6989d 192 PANTHER PTHR11178 1 189 1.9E-85 T 20-04-2016 AMC99_RS06135 c5606de195bdcf61804c65dfbf872e42 177 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 19 170 39.523 T 20-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AMC99_RS06135 c5606de195bdcf61804c65dfbf872e42 177 SUPERFAMILY SSF56770 28 172 7.59E-66 T 20-04-2016 AMC99_RS06135 c5606de195bdcf61804c65dfbf872e42 177 PANTHER PTHR11995 27 177 6.6E-116 T 20-04-2016 AMC99_RS06135 c5606de195bdcf61804c65dfbf872e42 177 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 56 165 3.5E-23 T 20-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 AMC99_RS06135 c5606de195bdcf61804c65dfbf872e42 177 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 137 153 - T 20-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AMC99_RS06135 c5606de195bdcf61804c65dfbf872e42 177 PANTHER PTHR11995:SF22 27 177 6.6E-116 T 20-04-2016 AMC99_RS06135 c5606de195bdcf61804c65dfbf872e42 177 Gene3D G3DSA:3.40.50.700 41 167 3.3E-33 T 20-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 AMC99_RS06135 c5606de195bdcf61804c65dfbf872e42 177 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 30 171 1.3E-73 T 20-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 Pfam PF00512 His Kinase A (phospho-acceptor) domain 761 827 1.2E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 SUPERFAMILY SSF47384 747 828 2.35E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 Gene3D G3DSA:3.30.565.10 830 982 2.0E-41 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 873 979 2.8E-20 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 SMART SM00387 872 981 2.7E-29 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 SUPERFAMILY SSF55874 819 983 1.7E-38 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 SUPERFAMILY SSF52172 1000 1116 5.98E-15 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 PRINTS PR00344 Bacterial sensor protein C-terminal signature 926 936 3.9E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 PRINTS PR00344 Bacterial sensor protein C-terminal signature 908 922 3.9E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 PRINTS PR00344 Bacterial sensor protein C-terminal signature 965 978 3.9E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 PRINTS PR00344 Bacterial sensor protein C-terminal signature 941 959 3.9E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 PANTHER PTHR24423 8 63 3.8E-139 T 20-04-2016 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 PANTHER PTHR24423 613 1116 3.8E-139 T 20-04-2016 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 PANTHER PTHR24423 180 199 3.8E-139 T 20-04-2016 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 SMART SM00091 615 683 7.5E-4 T 20-04-2016 IPR000014 PAS domain AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 SUPERFAMILY SSF55785 606 716 3.77E-8 T 20-04-2016 IPR000014 PAS domain AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 Gene3D G3DSA:3.40.50.2300 997 1116 5.9E-13 T 20-04-2016 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 PANTHER PTHR24423:SF439 8 63 3.8E-139 T 20-04-2016 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 PANTHER PTHR24423:SF439 613 1116 3.8E-139 T 20-04-2016 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 PANTHER PTHR24423:SF439 180 199 3.8E-139 T 20-04-2016 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 Pfam PF00072 Response regulator receiver domain 1004 1109 2.9E-6 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 Gene3D G3DSA:3.30.450.20 616 728 1.1E-11 T 20-04-2016 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 Gene3D G3DSA:1.10.287.130 754 824 1.5E-10 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 SMART SM00448 1002 1111 2.9E-13 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 Pfam PF12860 PAS fold 621 735 1.8E-39 T 20-04-2016 AMC99_RS02490 d8b02c7bffa4dee24a3d47c8be592eae 1119 SMART SM00388 761 828 8.0E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS00250 dec27c6c3dc594743aba5698fb16db41 770 Gene3D G3DSA:3.40.50.300 135 274 2.6E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00250 dec27c6c3dc594743aba5698fb16db41 770 Gene3D G3DSA:3.40.50.300 388 577 2.6E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00250 dec27c6c3dc594743aba5698fb16db41 770 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 198 582 2.3E-145 T 20-04-2016 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain AMC99_RS00250 dec27c6c3dc594743aba5698fb16db41 770 PANTHER PTHR30121:SF1 213 274 3.0E-12 T 20-04-2016 AMC99_RS00250 dec27c6c3dc594743aba5698fb16db41 770 PANTHER PTHR30121 213 274 3.0E-12 T 20-04-2016 AMC99_RS00250 dec27c6c3dc594743aba5698fb16db41 770 Gene3D G3DSA:1.10.8.80 275 383 5.5E-36 T 20-04-2016 AMC99_RS00250 dec27c6c3dc594743aba5698fb16db41 770 SUPERFAMILY SSF52540 200 586 5.93E-61 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02840 77bc138800e626af787c51951b77b365 89 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 2.0E-38 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS02840 77bc138800e626af787c51951b77b365 89 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 28.063 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS02840 77bc138800e626af787c51951b77b365 89 SUPERFAMILY SSF110324 2 81 3.45E-33 T 20-04-2016 AMC99_RS02840 77bc138800e626af787c51951b77b365 89 PANTHER PTHR15893 1 84 2.2E-46 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS02840 77bc138800e626af787c51951b77b365 89 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.3E-37 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS02840 77bc138800e626af787c51951b77b365 89 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.3E-37 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS02840 77bc138800e626af787c51951b77b365 89 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.3E-37 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS02840 77bc138800e626af787c51951b77b365 89 Gene3D G3DSA:2.40.50.100 20 81 3.5E-30 T 20-04-2016 AMC99_RS02840 77bc138800e626af787c51951b77b365 89 Pfam PF01016 Ribosomal L27 protein 2 81 9.4E-38 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS02840 77bc138800e626af787c51951b77b365 89 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 29 70 6.0E-16 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03825 37296eff6af0eedacdb22123f0b56f98 168 Gene3D G3DSA:3.40.1260.10 9 167 1.7E-49 T 20-04-2016 IPR027396 DsrEFH-like AMC99_RS03825 37296eff6af0eedacdb22123f0b56f98 168 PANTHER PTHR34655 7 168 3.6E-45 T 20-04-2016 AMC99_RS03825 37296eff6af0eedacdb22123f0b56f98 168 PANTHER PTHR34655:SF2 7 168 3.6E-45 T 20-04-2016 AMC99_RS03825 37296eff6af0eedacdb22123f0b56f98 168 SUPERFAMILY SSF75169 12 58 1.26E-19 T 20-04-2016 IPR027396 DsrEFH-like AMC99_RS03825 37296eff6af0eedacdb22123f0b56f98 168 SUPERFAMILY SSF75169 110 166 1.26E-19 T 20-04-2016 IPR027396 DsrEFH-like AMC99_RS03825 37296eff6af0eedacdb22123f0b56f98 168 Pfam PF13686 DsrE/DsrF/DrsH-like family 11 166 1.1E-51 T 20-04-2016 IPR032836 DsrE/DsrF/DrsH-like family AMC99_RS13550 cfd159a01c74d073d4fc79e7d45e62c7 273 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 24 270 5.2E-76 T 20-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AMC99_RS13550 cfd159a01c74d073d4fc79e7d45e62c7 273 Gene3D G3DSA:3.40.50.150 84 271 3.9E-56 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS13550 cfd159a01c74d073d4fc79e7d45e62c7 273 SUPERFAMILY SSF53335 1 262 1.86E-50 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS13550 cfd159a01c74d073d4fc79e7d45e62c7 273 PANTHER PTHR18895 1 272 2.6E-78 T 20-04-2016 AMC99_RS13550 cfd159a01c74d073d4fc79e7d45e62c7 273 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 2 270 2.3E-56 T 20-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AMC99_RS13550 cfd159a01c74d073d4fc79e7d45e62c7 273 PANTHER PTHR18895:SF64 1 272 2.6E-78 T 20-04-2016 AMC99_RS13550 cfd159a01c74d073d4fc79e7d45e62c7 273 Gene3D G3DSA:1.10.8.10 1 82 2.5E-25 T 20-04-2016 AMC99_RS13550 cfd159a01c74d073d4fc79e7d45e62c7 273 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 273 38.423 T 20-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AMC99_RS13550 cfd159a01c74d073d4fc79e7d45e62c7 273 Pfam PF13847 Methyltransferase domain 107 238 1.8E-10 T 20-04-2016 IPR025714 Methyltransferase domain AMC99_RS13550 cfd159a01c74d073d4fc79e7d45e62c7 273 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 181 187 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMC99_RS07410 7233e17cd9c36405a44b74ba172da68c 141 SUPERFAMILY SSF64263 1 119 1.44E-49 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07410 7233e17cd9c36405a44b74ba172da68c 141 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07410 7233e17cd9c36405a44b74ba172da68c 141 Gene3D G3DSA:3.90.1030.10 1 117 3.5E-49 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07410 7233e17cd9c36405a44b74ba172da68c 141 Pfam PF01196 Ribosomal protein L17 20 116 1.3E-35 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07410 7233e17cd9c36405a44b74ba172da68c 141 PANTHER PTHR14413 1 121 6.3E-61 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07410 7233e17cd9c36405a44b74ba172da68c 141 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.1E-42 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07410 7233e17cd9c36405a44b74ba172da68c 141 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.219 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS11180 050698d8546fb1083220093a3d2f04c1 157 SUPERFAMILY SSF74653 28 126 1.83E-13 T 20-04-2016 AMC99_RS11180 050698d8546fb1083220093a3d2f04c1 157 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 59 122 1.5E-8 T 20-04-2016 IPR006260 TonB, C-terminal GO:0006810 AMC99_RS11180 050698d8546fb1083220093a3d2f04c1 157 Pfam PF13103 TonB C terminal 34 117 6.9E-7 T 20-04-2016 IPR006260 TonB, C-terminal GO:0006810 AMC99_RS11180 050698d8546fb1083220093a3d2f04c1 157 Gene3D G3DSA:3.30.1150.10 31 127 5.6E-12 T 20-04-2016 AMC99_RS11305 48a18837ff591124eef775aa59a22b8f 389 Gene3D G3DSA:2.40.110.10 129 224 1.6E-38 T 20-04-2016 AMC99_RS11305 48a18837ff591124eef775aa59a22b8f 389 PANTHER PTHR10909:SF332 6 384 1.6E-226 T 20-04-2016 AMC99_RS11305 48a18837ff591124eef775aa59a22b8f 389 SUPERFAMILY SSF56645 6 249 1.01E-83 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS11305 48a18837ff591124eef775aa59a22b8f 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 3.2E-44 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS11305 48a18837ff591124eef775aa59a22b8f 389 Gene3D G3DSA:1.20.140.10 225 387 4.9E-65 T 20-04-2016 AMC99_RS11305 48a18837ff591124eef775aa59a22b8f 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 125 1.2E-37 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS11305 48a18837ff591124eef775aa59a22b8f 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 3.4E-26 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS11305 48a18837ff591124eef775aa59a22b8f 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_RS11305 48a18837ff591124eef775aa59a22b8f 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_RS11305 48a18837ff591124eef775aa59a22b8f 389 SUPERFAMILY SSF47203 235 386 6.77E-48 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS11305 48a18837ff591124eef775aa59a22b8f 389 Gene3D G3DSA:1.10.540.10 8 126 5.4E-42 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS11305 48a18837ff591124eef775aa59a22b8f 389 PANTHER PTHR10909 6 384 1.6E-226 T 20-04-2016 AMC99_RS03910 41e7252b419549df7bf6b1346b94156b 336 PANTHER PTHR11820:SF85 7 267 4.6E-133 T 20-04-2016 AMC99_RS03910 41e7252b419549df7bf6b1346b94156b 336 PANTHER PTHR11820:SF85 284 335 4.6E-133 T 20-04-2016 AMC99_RS03910 41e7252b419549df7bf6b1346b94156b 336 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 333 3.5E-40 T 20-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMC99_RS03910 41e7252b419549df7bf6b1346b94156b 336 SUPERFAMILY SSF56529 76 335 1.13E-60 T 20-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMC99_RS03910 41e7252b419549df7bf6b1346b94156b 336 PANTHER PTHR11820 7 267 4.6E-133 T 20-04-2016 AMC99_RS03910 41e7252b419549df7bf6b1346b94156b 336 PANTHER PTHR11820 284 335 4.6E-133 T 20-04-2016 AMC99_RS03910 41e7252b419549df7bf6b1346b94156b 336 Gene3D G3DSA:3.90.850.10 67 269 2.1E-42 T 20-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMC99_RS03910 41e7252b419549df7bf6b1346b94156b 336 Gene3D G3DSA:3.90.850.10 306 319 2.1E-42 T 20-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMC99_RS11170 c50e31b3274f56e33edbedee41358428 683 Pfam PF02867 Ribonucleotide reductase, barrel domain 166 485 4.4E-76 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_RS11170 c50e31b3274f56e33edbedee41358428 683 Pfam PF02867 Ribonucleotide reductase, barrel domain 494 639 4.6E-34 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_RS11170 c50e31b3274f56e33edbedee41358428 683 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 97 162 6.4E-14 T 20-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMC99_RS11170 c50e31b3274f56e33edbedee41358428 683 PANTHER PTHR11573 82 648 4.4E-217 T 20-04-2016 AMC99_RS11170 c50e31b3274f56e33edbedee41358428 683 PRINTS PR01183 Ribonucleotide reductase large chain signature 457 480 1.6E-16 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_RS11170 c50e31b3274f56e33edbedee41358428 683 PRINTS PR01183 Ribonucleotide reductase large chain signature 239 258 1.6E-16 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_RS11170 c50e31b3274f56e33edbedee41358428 683 PRINTS PR01183 Ribonucleotide reductase large chain signature 429 451 1.6E-16 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_RS11170 c50e31b3274f56e33edbedee41358428 683 PRINTS PR01183 Ribonucleotide reductase large chain signature 350 361 1.6E-16 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_RS11170 c50e31b3274f56e33edbedee41358428 683 SUPERFAMILY SSF51998 165 543 6.1E-137 T 20-04-2016 AMC99_RS11170 c50e31b3274f56e33edbedee41358428 683 SUPERFAMILY SSF51998 576 649 6.1E-137 T 20-04-2016 AMC99_RS11170 c50e31b3274f56e33edbedee41358428 683 Gene3D G3DSA:3.20.70.20 599 644 1.2E-58 T 20-04-2016 AMC99_RS11170 c50e31b3274f56e33edbedee41358428 683 Gene3D G3DSA:3.20.70.20 88 538 1.2E-58 T 20-04-2016 AMC99_RS11170 c50e31b3274f56e33edbedee41358428 683 SUPERFAMILY SSF48168 83 161 7.72E-17 T 20-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMC99_RS02455 397229487e80bae85ee6b93f69ad06ff 428 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 140 1.2E-9 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS02455 397229487e80bae85ee6b93f69ad06ff 428 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 151 233 9.8E-22 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS02455 397229487e80bae85ee6b93f69ad06ff 428 PANTHER PTHR10909 49 421 9.1E-166 T 20-04-2016 AMC99_RS02455 397229487e80bae85ee6b93f69ad06ff 428 Gene3D G3DSA:2.40.110.10 150 253 3.2E-32 T 20-04-2016 AMC99_RS02455 397229487e80bae85ee6b93f69ad06ff 428 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 263 414 1.2E-40 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS02455 397229487e80bae85ee6b93f69ad06ff 428 SUPERFAMILY SSF47203 261 422 1.27E-41 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS02455 397229487e80bae85ee6b93f69ad06ff 428 SUPERFAMILY SSF56645 26 272 5.37E-57 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS02455 397229487e80bae85ee6b93f69ad06ff 428 Gene3D G3DSA:1.20.140.10 254 418 1.2E-44 T 20-04-2016 AMC99_RS02455 397229487e80bae85ee6b93f69ad06ff 428 Gene3D G3DSA:1.10.540.10 2 140 1.2E-23 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS02455 397229487e80bae85ee6b93f69ad06ff 428 PANTHER PTHR10909 1 32 9.1E-166 T 20-04-2016 AMC99_RS02455 397229487e80bae85ee6b93f69ad06ff 428 PANTHER PTHR10909:SF303 1 32 9.1E-166 T 20-04-2016 AMC99_RS02455 397229487e80bae85ee6b93f69ad06ff 428 PANTHER PTHR10909:SF303 49 421 9.1E-166 T 20-04-2016 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 20-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 287 390 2.3E-16 T 20-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 Gene3D G3DSA:3.20.20.10 36 268 3.6E-74 T 20-04-2016 IPR029066 PLP-binding barrel AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 SUPERFAMILY SSF51419 26 284 1.02E-71 T 20-04-2016 IPR029066 PLP-binding barrel AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 411 3.2E-131 T 20-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 1.85E-21 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 1.85E-21 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 1.85E-21 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 371 384 1.85E-21 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 1.85E-21 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 PANTHER PTHR11482:SF5 1 396 2.1E-139 T 20-04-2016 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 1.34E-25 T 20-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 301 319 1.34E-25 T 20-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 381 403 1.34E-25 T 20-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 1.34E-25 T 20-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 SUPERFAMILY SSF50621 255 416 6.07E-45 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 242 - T 20-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 414 37.808 T 20-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 Gene3D G3DSA:2.40.37.10 269 418 4.8E-39 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 PANTHER PTHR11482 1 396 2.1E-139 T 20-04-2016 AMC99_RS08775 cd2b01363a3a8120bf05862a2534fdb9 419 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 42 282 3.8E-55 T 20-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 AMC99_RS08845 07e7e22aa7d8a5a0dd03d470a7d186ea 385 PANTHER PTHR21152:SF23 4 380 2.7E-138 T 20-04-2016 AMC99_RS08845 07e7e22aa7d8a5a0dd03d470a7d186ea 385 Gene3D G3DSA:3.40.640.10 20 264 2.0E-41 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS08845 07e7e22aa7d8a5a0dd03d470a7d186ea 385 Pfam PF00266 Aminotransferase class-V 75 314 1.4E-5 T 20-04-2016 IPR000192 Aminotransferase class V domain AMC99_RS08845 07e7e22aa7d8a5a0dd03d470a7d186ea 385 PANTHER PTHR21152 4 380 2.7E-138 T 20-04-2016 AMC99_RS08845 07e7e22aa7d8a5a0dd03d470a7d186ea 385 PIRSF PIRSF000525 10 383 3.7E-46 T 20-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 AMC99_RS08845 07e7e22aa7d8a5a0dd03d470a7d186ea 385 SUPERFAMILY SSF53383 12 381 4.89E-69 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS08845 07e7e22aa7d8a5a0dd03d470a7d186ea 385 TIGRFAM TIGR01365 serC_2: phosphoserine aminotransferase 8 381 2.0E-161 T 20-04-2016 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 AMC99_RS06965 be6699036716beb71fa30daf06cda6c7 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 2.5E-9 T 20-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_RS06965 be6699036716beb71fa30daf06cda6c7 324 SMART SM00829 11 322 5.2E-52 T 20-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_RS06965 be6699036716beb71fa30daf06cda6c7 324 SUPERFAMILY SSF50129 1 139 7.15E-39 T 20-04-2016 IPR011032 GroES-like AMC99_RS06965 be6699036716beb71fa30daf06cda6c7 324 Gene3D G3DSA:3.40.50.720 145 261 9.3E-27 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06965 be6699036716beb71fa30daf06cda6c7 324 Gene3D G3DSA:3.90.180.10 1 144 8.3E-45 T 20-04-2016 IPR011032 GroES-like AMC99_RS06965 be6699036716beb71fa30daf06cda6c7 324 Pfam PF00107 Zinc-binding dehydrogenase 151 266 7.0E-22 T 20-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_RS06965 be6699036716beb71fa30daf06cda6c7 324 PANTHER PTHR11695:SF31 16 324 2.3E-92 T 20-04-2016 AMC99_RS06965 be6699036716beb71fa30daf06cda6c7 324 PANTHER PTHR11695 16 324 2.3E-92 T 20-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMC99_RS06965 be6699036716beb71fa30daf06cda6c7 324 SUPERFAMILY SSF51735 111 268 5.26E-43 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS03855 7ebe39513e935ea2416668d90756529a 364 Pfam PF01883 Domain of unknown function DUF59 8 76 1.2E-11 T 20-04-2016 IPR002744 Domain of unknown function DUF59 AMC99_RS03855 7ebe39513e935ea2416668d90756529a 364 Gene3D G3DSA:3.40.50.300 105 357 2.2E-100 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03855 7ebe39513e935ea2416668d90756529a 364 PANTHER PTHR23264 1 364 3.8E-138 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMC99_RS03855 7ebe39513e935ea2416668d90756529a 364 Hamap MF_02040 Iron-sulfur cluster carrier protein. 108 359 36.163 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMC99_RS03855 7ebe39513e935ea2416668d90756529a 364 SUPERFAMILY SSF117916 4 88 1.28E-13 T 20-04-2016 AMC99_RS03855 7ebe39513e935ea2416668d90756529a 364 SUPERFAMILY SSF52540 101 343 4.23E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03855 7ebe39513e935ea2416668d90756529a 364 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 113 358 3.0E-95 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMC99_RS02210 45176d0a3e66cdd22940b2d79c750c7a 637 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 511 632 1.1E-24 T 20-04-2016 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 KEGG: 00590+3.3.2.6|UniPathway: UPA00878 AMC99_RS02210 45176d0a3e66cdd22940b2d79c750c7a 637 Gene3D G3DSA:1.10.390.10 339 486 1.3E-25 T 20-04-2016 AMC99_RS02210 45176d0a3e66cdd22940b2d79c750c7a 637 SMART SM01263 493 633 6.0E-33 T 20-04-2016 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 KEGG: 00590+3.3.2.6|UniPathway: UPA00878 AMC99_RS02210 45176d0a3e66cdd22940b2d79c750c7a 637 Pfam PF01433 Peptidase family M1 45 405 9.9E-56 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_RS02210 45176d0a3e66cdd22940b2d79c750c7a 637 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 174 189 1.4E-12 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_RS02210 45176d0a3e66cdd22940b2d79c750c7a 637 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 324 339 1.4E-12 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_RS02210 45176d0a3e66cdd22940b2d79c750c7a 637 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 343 355 1.4E-12 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_RS02210 45176d0a3e66cdd22940b2d79c750c7a 637 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 297 307 1.4E-12 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_RS02210 45176d0a3e66cdd22940b2d79c750c7a 637 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 223 238 1.4E-12 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_RS02210 45176d0a3e66cdd22940b2d79c750c7a 637 SUPERFAMILY SSF55486 246 485 1.17E-57 T 20-04-2016 AMC99_RS02210 45176d0a3e66cdd22940b2d79c750c7a 637 PANTHER PTHR11533 29 600 5.1E-129 T 20-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 AMC99_RS02210 45176d0a3e66cdd22940b2d79c750c7a 637 SUPERFAMILY SSF48371 495 634 1.55E-30 T 20-04-2016 IPR016024 Armadillo-type fold GO:0005488 AMC99_RS02210 45176d0a3e66cdd22940b2d79c750c7a 637 PANTHER PTHR11533:SF174 29 600 5.1E-129 T 20-04-2016 AMC99_RS02210 45176d0a3e66cdd22940b2d79c750c7a 637 SUPERFAMILY SSF63737 37 240 4.32E-36 T 20-04-2016 AMC99_RS04030 86ffb21c39cbc239d1f6e6c64f049425 205 Gene3D G3DSA:1.10.10.10 142 198 9.4E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS04030 86ffb21c39cbc239d1f6e6c64f049425 205 SUPERFAMILY SSF46894 128 198 1.09E-20 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_RS04030 86ffb21c39cbc239d1f6e6c64f049425 205 SUPERFAMILY SSF52172 18 160 4.07E-11 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS04030 86ffb21c39cbc239d1f6e6c64f049425 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 194 4.7E-23 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS04030 86ffb21c39cbc239d1f6e6c64f049425 205 ProSitePatterns PS00622 LuxR-type HTH domain signature. 155 182 - T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS04030 86ffb21c39cbc239d1f6e6c64f049425 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 2.3E-14 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS04030 86ffb21c39cbc239d1f6e6c64f049425 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 2.3E-14 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS04030 86ffb21c39cbc239d1f6e6c64f049425 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 2.3E-14 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS04030 86ffb21c39cbc239d1f6e6c64f049425 205 Gene3D G3DSA:3.40.50.2300 64 141 3.7E-8 T 20-04-2016 AMC99_RS04030 86ffb21c39cbc239d1f6e6c64f049425 205 SMART SM00421 138 195 2.6E-21 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS04030 86ffb21c39cbc239d1f6e6c64f049425 205 PANTHER PTHR26402 64 194 1.1E-22 T 20-04-2016 AMC99_RS10200 a327da3d90d099e259b189620d4ab8f3 1069 Gene3D G3DSA:2.80.10.50 939 1068 3.4E-13 T 20-04-2016 AMC99_RS06170 0f4eb381bf39671b49a6cff3aa8dbb29 338 Gene3D G3DSA:3.40.50.720 129 305 8.5E-68 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06170 0f4eb381bf39671b49a6cff3aa8dbb29 338 SUPERFAMILY SSF51735 115 303 2.25E-62 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06170 0f4eb381bf39671b49a6cff3aa8dbb29 338 SUPERFAMILY SSF52283 16 149 8.13E-36 T 20-04-2016 AMC99_RS06170 0f4eb381bf39671b49a6cff3aa8dbb29 338 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 213 235 - T 20-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMC99_RS06170 0f4eb381bf39671b49a6cff3aa8dbb29 338 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 126 302 1.2E-61 T 20-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMC99_RS06170 0f4eb381bf39671b49a6cff3aa8dbb29 338 Gene3D G3DSA:3.40.50.720 16 128 8.2E-34 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06170 0f4eb381bf39671b49a6cff3aa8dbb29 338 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 19 333 2.4E-28 T 20-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AMC99_RS06170 0f4eb381bf39671b49a6cff3aa8dbb29 338 PANTHER PTHR10996 8 335 4.0E-125 T 20-04-2016 AMC99_RS05630 b6679a1514c3ee4b87721096979e9ebf 444 SMART SM00671 99 134 360.0 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS05630 b6679a1514c3ee4b87721096979e9ebf 444 SMART SM00671 356 391 4.2E-4 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS05630 b6679a1514c3ee4b87721096979e9ebf 444 SMART SM00671 320 355 37.0 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS05630 b6679a1514c3ee4b87721096979e9ebf 444 SMART SM00671 392 427 150.0 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS05630 b6679a1514c3ee4b87721096979e9ebf 444 Gene3D G3DSA:1.25.40.10 89 137 5.9E-32 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS05630 b6679a1514c3ee4b87721096979e9ebf 444 Gene3D G3DSA:1.25.40.10 229 432 5.9E-32 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS05630 b6679a1514c3ee4b87721096979e9ebf 444 SUPERFAMILY SSF81901 257 435 1.66E-21 T 20-04-2016 AMC99_RS05630 b6679a1514c3ee4b87721096979e9ebf 444 PANTHER PTHR11102 266 422 4.1E-25 T 20-04-2016 AMC99_RS05630 b6679a1514c3ee4b87721096979e9ebf 444 PANTHER PTHR11102 226 245 4.1E-25 T 20-04-2016 AMC99_RS05630 b6679a1514c3ee4b87721096979e9ebf 444 PANTHER PTHR11102 89 134 4.1E-25 T 20-04-2016 AMC99_RS08400 4b445c764f5a89839cf57745088c650e 293 Pfam PF00781 Diacylglycerol kinase catalytic domain 6 110 2.3E-11 T 20-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMC99_RS08400 4b445c764f5a89839cf57745088c650e 293 SUPERFAMILY SSF111331 1 290 1.16E-36 T 20-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain AMC99_RS13670 82d1558db4120bb96adba6bf3144796f 151 PANTHER PTHR13355:SF5 54 141 1.6E-14 T 20-04-2016 AMC99_RS13670 82d1558db4120bb96adba6bf3144796f 151 PANTHER PTHR13355 54 141 1.6E-14 T 20-04-2016 AMC99_RS13670 82d1558db4120bb96adba6bf3144796f 151 Pfam PF13673 Acetyltransferase (GNAT) domain 42 129 2.8E-11 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS13670 82d1558db4120bb96adba6bf3144796f 151 SUPERFAMILY SSF55729 15 129 1.62E-18 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS13670 82d1558db4120bb96adba6bf3144796f 151 Gene3D G3DSA:3.40.630.30 14 135 1.2E-23 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS06770 fab856e5c7bf4c78fc3cc784fe9c64bc 276 PANTHER PTHR30237:SF2 3 268 3.2E-25 T 20-04-2016 AMC99_RS06770 fab856e5c7bf4c78fc3cc784fe9c64bc 276 Gene3D G3DSA:3.40.50.10740 3 148 2.4E-28 T 20-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain AMC99_RS06770 fab856e5c7bf4c78fc3cc784fe9c64bc 276 Pfam PF02016 LD-carboxypeptidase 4 269 2.2E-41 T 20-04-2016 IPR003507 Peptidase family S66 AMC99_RS06770 fab856e5c7bf4c78fc3cc784fe9c64bc 276 PANTHER PTHR30237 3 268 3.2E-25 T 20-04-2016 AMC99_RS06770 fab856e5c7bf4c78fc3cc784fe9c64bc 276 Gene3D G3DSA:3.50.30.60 166 269 1.6E-17 T 20-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain AMC99_RS06770 fab856e5c7bf4c78fc3cc784fe9c64bc 276 SUPERFAMILY SSF141986 165 269 2.62E-18 T 20-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain AMC99_RS06770 fab856e5c7bf4c78fc3cc784fe9c64bc 276 SUPERFAMILY SSF52317 3 153 3.43E-29 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS10015 1d24ad109464e00ee36eda508b16e098 598 PANTHER PTHR33361 36 592 1.7E-154 T 20-04-2016 AMC99_RS10015 1d24ad109464e00ee36eda508b16e098 598 Pfam PF05960 Bacterial protein of unknown function (DUF885) 56 590 3.3E-96 T 20-04-2016 IPR010281 Protein of unknown function DUF885 AMC99_RS10015 1d24ad109464e00ee36eda508b16e098 598 PANTHER PTHR33361:SF5 36 592 1.7E-154 T 20-04-2016 AMC99_RS04595 acdc55a63e5ef8bf7fe4fe96ef73e433 159 Pfam PF08534 Redoxin 5 156 8.6E-36 T 20-04-2016 IPR013740 Redoxin GO:0016491 AMC99_RS04595 acdc55a63e5ef8bf7fe4fe96ef73e433 159 PANTHER PTHR10430 1 159 6.4E-81 T 20-04-2016 AMC99_RS04595 acdc55a63e5ef8bf7fe4fe96ef73e433 159 Gene3D G3DSA:3.40.30.10 1 159 6.1E-62 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS04595 acdc55a63e5ef8bf7fe4fe96ef73e433 159 SUPERFAMILY SSF52833 1 158 2.6E-39 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS08465 0cbec972e2c89e81fa581345eb7ec13e 512 Gene3D G3DSA:3.40.50.300 262 475 1.4E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08465 0cbec972e2c89e81fa581345eb7ec13e 512 PANTHER PTHR30258:SF3 99 492 7.7E-135 T 20-04-2016 AMC99_RS08465 0cbec972e2c89e81fa581345eb7ec13e 512 Gene3D G3DSA:3.30.450.90 161 258 1.6E-34 T 20-04-2016 AMC99_RS08465 0cbec972e2c89e81fa581345eb7ec13e 512 Pfam PF00437 Type II/IV secretion system protein 165 440 1.1E-80 T 20-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AMC99_RS08465 0cbec972e2c89e81fa581345eb7ec13e 512 SUPERFAMILY SSF52540 147 447 1.56E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08465 0cbec972e2c89e81fa581345eb7ec13e 512 PANTHER PTHR30258 99 492 7.7E-135 T 20-04-2016 AMC99_RS09560 25a0c481a6963c1236d4aba5b14b19a6 493 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 20 482 3.3E-165 T 20-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS09560 25a0c481a6963c1236d4aba5b14b19a6 493 Gene3D G3DSA:3.90.1300.10 2 491 2.0E-171 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS09560 25a0c481a6963c1236d4aba5b14b19a6 493 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 484 88.298 T 20-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS09560 25a0c481a6963c1236d4aba5b14b19a6 493 PANTHER PTHR11895 1 490 3.1E-201 T 20-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS09560 25a0c481a6963c1236d4aba5b14b19a6 493 SUPERFAMILY SSF75304 3 489 5.1E-152 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS09560 25a0c481a6963c1236d4aba5b14b19a6 493 ProSitePatterns PS00571 Amidases signature. 157 188 - T 20-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS09560 25a0c481a6963c1236d4aba5b14b19a6 493 Pfam PF01425 Amidase 26 473 8.0E-147 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS09560 25a0c481a6963c1236d4aba5b14b19a6 493 PANTHER PTHR11895:SF7 1 490 3.1E-201 T 20-04-2016 AMC99_RS03140 d54e841e77e3b748b77655f6e5ceb2a1 449 SUPERFAMILY SSF51246 331 444 3.56E-43 T 20-04-2016 IPR011054 Rudiment single hybrid motif AMC99_RS03140 d54e841e77e3b748b77655f6e5ceb2a1 449 PANTHER PTHR18866 3 447 1.9E-287 T 20-04-2016 AMC99_RS03140 d54e841e77e3b748b77655f6e5ceb2a1 449 Gene3D G3DSA:3.30.470.20 206 444 5.9E-98 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMC99_RS03140 d54e841e77e3b748b77655f6e5ceb2a1 449 SMART SM00878 336 441 8.4E-65 T 20-04-2016 IPR005482 Biotin carboxylase, C-terminal AMC99_RS03140 d54e841e77e3b748b77655f6e5ceb2a1 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 4.0E-45 T 20-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain AMC99_RS03140 d54e841e77e3b748b77655f6e5ceb2a1 449 SUPERFAMILY SSF52440 2 114 1.9E-48 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS03140 d54e841e77e3b748b77655f6e5ceb2a1 449 SUPERFAMILY SSF56059 84 347 1.77E-73 T 20-04-2016 AMC99_RS03140 d54e841e77e3b748b77655f6e5ceb2a1 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 3 445 8.8E-215 T 20-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AMC99_RS03140 d54e841e77e3b748b77655f6e5ceb2a1 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 5.5E-82 T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_RS03140 d54e841e77e3b748b77655f6e5ceb2a1 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 4.7E-40 T 20-04-2016 IPR005482 Biotin carboxylase, C-terminal AMC99_RS03140 d54e841e77e3b748b77655f6e5ceb2a1 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_RS03140 d54e841e77e3b748b77655f6e5ceb2a1 449 Gene3D G3DSA:3.30.1490.20 131 203 1.5E-29 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS03140 d54e841e77e3b748b77655f6e5ceb2a1 449 Gene3D G3DSA:3.40.50.20 3 130 1.4E-49 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS03140 d54e841e77e3b748b77655f6e5ceb2a1 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_RS08410 8b605be96305dfb1b9027c0e934e52ca 802 SUPERFAMILY SSF56935 689 802 1.37E-105 T 20-04-2016 AMC99_RS08410 8b605be96305dfb1b9027c0e934e52ca 802 SUPERFAMILY SSF56935 55 650 1.37E-105 T 20-04-2016 AMC99_RS08410 8b605be96305dfb1b9027c0e934e52ca 802 Gene3D G3DSA:2.40.170.20 692 801 3.8E-81 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS08410 8b605be96305dfb1b9027c0e934e52ca 802 Gene3D G3DSA:2.40.170.20 199 649 3.8E-81 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS08410 8b605be96305dfb1b9027c0e934e52ca 802 PANTHER PTHR32552 691 802 1.6E-56 T 20-04-2016 AMC99_RS08410 8b605be96305dfb1b9027c0e934e52ca 802 PANTHER PTHR32552 376 654 1.6E-56 T 20-04-2016 AMC99_RS08410 8b605be96305dfb1b9027c0e934e52ca 802 PANTHER PTHR32552 7 353 1.6E-56 T 20-04-2016 AMC99_RS08410 8b605be96305dfb1b9027c0e934e52ca 802 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 188 2.2E-12 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS08410 8b605be96305dfb1b9027c0e934e52ca 802 Gene3D G3DSA:2.170.130.10 56 198 1.6E-25 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS08410 8b605be96305dfb1b9027c0e934e52ca 802 Pfam PF00593 TonB dependent receptor 513 774 3.3E-17 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS08410 8b605be96305dfb1b9027c0e934e52ca 802 PANTHER PTHR32552:SF33 691 802 1.6E-56 T 20-04-2016 AMC99_RS08410 8b605be96305dfb1b9027c0e934e52ca 802 PANTHER PTHR32552:SF33 376 654 1.6E-56 T 20-04-2016 AMC99_RS08410 8b605be96305dfb1b9027c0e934e52ca 802 PANTHER PTHR32552:SF33 7 353 1.6E-56 T 20-04-2016 AMC99_RS04650 aa83c2c5f85d16441a570259923a5164 227 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 68 146 4.4E-15 T 20-04-2016 IPR006260 TonB, C-terminal GO:0006810 AMC99_RS04650 aa83c2c5f85d16441a570259923a5164 227 Gene3D G3DSA:3.30.1150.10 67 125 6.6E-8 T 20-04-2016 AMC99_RS04650 aa83c2c5f85d16441a570259923a5164 227 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 69 131 5.8E-11 T 20-04-2016 IPR006260 TonB, C-terminal GO:0006810 AMC99_RS04650 aa83c2c5f85d16441a570259923a5164 227 SUPERFAMILY SSF74653 52 147 2.88E-13 T 20-04-2016 AMC99_RS05595 160036e8e9428d4c43a2b651108969f8 195 SUPERFAMILY SSF51064 138 194 4.71E-18 T 20-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 AMC99_RS05595 160036e8e9428d4c43a2b651108969f8 195 PANTHER PTHR21237 27 195 1.8E-59 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMC99_RS05595 160036e8e9428d4c43a2b651108969f8 195 Gene3D G3DSA:3.90.20.20 32 135 3.5E-25 T 20-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil AMC99_RS05595 160036e8e9428d4c43a2b651108969f8 195 Pfam PF01025 GrpE 29 192 3.9E-48 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMC99_RS05595 160036e8e9428d4c43a2b651108969f8 195 Gene3D G3DSA:2.30.22.10 136 194 6.6E-25 T 20-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 AMC99_RS05595 160036e8e9428d4c43a2b651108969f8 195 SUPERFAMILY SSF58014 37 136 2.22E-22 T 20-04-2016 AMC99_RS05595 160036e8e9428d4c43a2b651108969f8 195 PRINTS PR00773 GrpE protein signature 58 74 1.4E-22 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMC99_RS05595 160036e8e9428d4c43a2b651108969f8 195 PRINTS PR00773 GrpE protein signature 171 190 1.4E-22 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMC99_RS05595 160036e8e9428d4c43a2b651108969f8 195 PRINTS PR00773 GrpE protein signature 86 101 1.4E-22 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMC99_RS05595 160036e8e9428d4c43a2b651108969f8 195 PRINTS PR00773 GrpE protein signature 144 159 1.4E-22 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMC99_RS05595 160036e8e9428d4c43a2b651108969f8 195 Hamap MF_01151 Protein GrpE [grpE]. 8 192 18.013 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMC99_RS02055 b49349e9e7943c23df9fb21ec37510c5 444 PANTHER PTHR10909 1 427 2.5E-225 T 20-04-2016 AMC99_RS02055 b49349e9e7943c23df9fb21ec37510c5 444 Gene3D G3DSA:1.10.540.10 1 142 3.6E-35 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS02055 b49349e9e7943c23df9fb21ec37510c5 444 Gene3D G3DSA:1.20.140.10 247 411 1.2E-45 T 20-04-2016 AMC99_RS02055 b49349e9e7943c23df9fb21ec37510c5 444 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 257 405 1.9E-36 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS02055 b49349e9e7943c23df9fb21ec37510c5 444 SUPERFAMILY SSF47203 255 412 6.93E-43 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS02055 b49349e9e7943c23df9fb21ec37510c5 444 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 140 3.3E-18 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS02055 b49349e9e7943c23df9fb21ec37510c5 444 Gene3D G3DSA:2.40.110.10 143 246 1.7E-35 T 20-04-2016 AMC99_RS02055 b49349e9e7943c23df9fb21ec37510c5 444 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 144 240 3.6E-19 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS02055 b49349e9e7943c23df9fb21ec37510c5 444 SUPERFAMILY SSF56645 1 270 4.32E-64 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS02055 b49349e9e7943c23df9fb21ec37510c5 444 PANTHER PTHR10909:SF329 1 427 2.5E-225 T 20-04-2016 AMC99_RS11350 4f06dd23f92c15b6563f3c3db09b7b94 315 SUPERFAMILY SSF55781 59 203 9.53E-15 T 20-04-2016 IPR029016 GAF domain-like AMC99_RS11350 4f06dd23f92c15b6563f3c3db09b7b94 315 Pfam PF02954 Bacterial regulatory protein, Fis family 272 309 1.1E-12 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS11350 4f06dd23f92c15b6563f3c3db09b7b94 315 Gene3D G3DSA:1.10.10.60 272 309 2.8E-15 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS11350 4f06dd23f92c15b6563f3c3db09b7b94 315 SUPERFAMILY SSF46689 272 312 8.29E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS11350 4f06dd23f92c15b6563f3c3db09b7b94 315 Pfam PF01590 GAF domain 66 193 8.9E-11 T 20-04-2016 IPR003018 GAF domain GO:0005515 AMC99_RS11350 4f06dd23f92c15b6563f3c3db09b7b94 315 Gene3D G3DSA:3.30.450.40 151 203 4.4E-6 T 20-04-2016 IPR029016 GAF domain-like AMC99_RS11350 4f06dd23f92c15b6563f3c3db09b7b94 315 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 276 293 7.2E-12 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS11350 4f06dd23f92c15b6563f3c3db09b7b94 315 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 293 313 7.2E-12 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 111 123 5.4E-22 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 42 58 5.4E-22 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 204 223 5.4E-22 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 Pfam PF00717 Peptidase S24-like 49 133 3.7E-17 T 20-04-2016 IPR019759 Peptidase S24/S26A/S26B AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 PANTHER PTHR12383:SF27 91 157 7.4E-53 T 20-04-2016 AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 PANTHER PTHR12383:SF27 17 74 7.4E-53 T 20-04-2016 AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 PANTHER PTHR12383:SF27 186 252 7.4E-53 T 20-04-2016 AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 SUPERFAMILY SSF51306 40 274 9.42E-59 T 20-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 PANTHER PTHR12383 91 157 7.4E-53 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 PANTHER PTHR12383 17 74 7.4E-53 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 PANTHER PTHR12383 186 252 7.4E-53 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 ProSitePatterns PS00761 Signal peptidases I signature 3. 209 222 - T 20-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 Gene3D G3DSA:2.10.109.10 204 264 2.0E-41 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 Gene3D G3DSA:2.10.109.10 38 121 2.0E-41 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 ProSitePatterns PS00760 Signal peptidases I lysine active site. 113 125 - T 20-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AMC99_RS04430 d90bef9182bd2606fca3e0bdeedc59a4 276 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 28 251 5.3E-43 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_RS08550 ef146a87350dcd07c96a0f499ec0dd7a 371 PANTHER PTHR20941 96 362 3.0E-96 T 20-04-2016 AMC99_RS08550 ef146a87350dcd07c96a0f499ec0dd7a 371 Gene3D G3DSA:3.20.20.20 95 359 2.4E-93 T 20-04-2016 IPR000489 Pterin-binding domain GO:0042558 AMC99_RS08550 ef146a87350dcd07c96a0f499ec0dd7a 371 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 99 355 4.3E-84 T 20-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 AMC99_RS08550 ef146a87350dcd07c96a0f499ec0dd7a 371 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 100 115 - T 20-04-2016 IPR000489 Pterin-binding domain GO:0042558 AMC99_RS08550 ef146a87350dcd07c96a0f499ec0dd7a 371 PANTHER PTHR20941:SF1 96 362 3.0E-96 T 20-04-2016 AMC99_RS08550 ef146a87350dcd07c96a0f499ec0dd7a 371 Pfam PF00809 Pterin binding enzyme 101 342 4.1E-69 T 20-04-2016 IPR000489 Pterin-binding domain GO:0042558 AMC99_RS08550 ef146a87350dcd07c96a0f499ec0dd7a 371 SUPERFAMILY SSF51717 88 359 1.83E-88 T 20-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 AMC99_RS08550 ef146a87350dcd07c96a0f499ec0dd7a 371 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 135 148 - T 20-04-2016 IPR000489 Pterin-binding domain GO:0042558 AMC99_RS09295 541001479d62c697f1315541fac08f96 277 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 17 86 1.2E-15 T 20-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 AMC99_RS09295 541001479d62c697f1315541fac08f96 277 SUPERFAMILY SSF55729 81 241 3.16E-22 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS09295 541001479d62c697f1315541fac08f96 277 PIRSF PIRSF037208 3 252 4.8E-80 T 20-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic AMC99_RS09295 541001479d62c697f1315541fac08f96 277 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 243 41.42 T 20-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic AMC99_RS09295 541001479d62c697f1315541fac08f96 277 PANTHER PTHR21367 17 253 5.3E-58 T 20-04-2016 IPR030700 Arginine-tRNA-protein transferase AMC99_RS09295 541001479d62c697f1315541fac08f96 277 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 106 234 3.4E-29 T 20-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 AMC99_RS09295 541001479d62c697f1315541fac08f96 277 PANTHER PTHR21367:SF0 17 253 5.3E-58 T 20-04-2016 AMC99_RS05555 73d4aa5797a438d771e14bc76385540f 318 Gene3D G3DSA:3.40.50.20 3 131 1.3E-48 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS05555 73d4aa5797a438d771e14bc76385540f 318 SUPERFAMILY SSF52440 3 124 1.41E-39 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS05555 73d4aa5797a438d771e14bc76385540f 318 PANTHER PTHR21621 1 317 7.7E-113 T 20-04-2016 AMC99_RS05555 73d4aa5797a438d771e14bc76385540f 318 PANTHER PTHR21621:SF4 1 317 7.7E-113 T 20-04-2016 AMC99_RS05555 73d4aa5797a438d771e14bc76385540f 318 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 126 299 9.5E-64 T 20-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AMC99_RS05555 73d4aa5797a438d771e14bc76385540f 318 Hamap MF_00162 Glutathione synthetase [gshB]. 1 318 145.718 T 20-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AMC99_RS05555 73d4aa5797a438d771e14bc76385540f 318 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 313 4.5E-115 T 20-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AMC99_RS05555 73d4aa5797a438d771e14bc76385540f 318 Gene3D G3DSA:3.30.470.20 194 302 1.0E-43 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMC99_RS05555 73d4aa5797a438d771e14bc76385540f 318 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 122 7.6E-41 T 20-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AMC99_RS05555 73d4aa5797a438d771e14bc76385540f 318 Gene3D G3DSA:3.30.1490.20 139 193 5.6E-23 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS05555 73d4aa5797a438d771e14bc76385540f 318 SUPERFAMILY SSF56059 126 314 4.38E-56 T 20-04-2016 AMC99_RS11730 d4cf81e4a6500609c616ce3ede2dcb08 547 Pfam PF02225 PA domain 131 209 1.2E-5 T 20-04-2016 IPR003137 PA domain AMC99_RS11730 d4cf81e4a6500609c616ce3ede2dcb08 547 PANTHER PTHR12147 175 199 1.1E-132 T 20-04-2016 AMC99_RS11730 d4cf81e4a6500609c616ce3ede2dcb08 547 PANTHER PTHR12147:SF20 26 159 1.1E-132 T 20-04-2016 AMC99_RS11730 d4cf81e4a6500609c616ce3ede2dcb08 547 PANTHER PTHR12147:SF20 175 199 1.1E-132 T 20-04-2016 AMC99_RS11730 d4cf81e4a6500609c616ce3ede2dcb08 547 PANTHER PTHR12147:SF20 232 467 1.1E-132 T 20-04-2016 AMC99_RS11730 d4cf81e4a6500609c616ce3ede2dcb08 547 Pfam PF04389 Peptidase family M28 293 505 5.8E-42 T 20-04-2016 IPR007484 Peptidase M28 AMC99_RS11730 d4cf81e4a6500609c616ce3ede2dcb08 547 SUPERFAMILY SSF52025 124 208 1.83E-5 T 20-04-2016 AMC99_RS11730 d4cf81e4a6500609c616ce3ede2dcb08 547 Gene3D G3DSA:3.40.630.10 23 76 5.8E-58 T 20-04-2016 AMC99_RS11730 d4cf81e4a6500609c616ce3ede2dcb08 547 Gene3D G3DSA:3.40.630.10 278 526 5.8E-58 T 20-04-2016 AMC99_RS11730 d4cf81e4a6500609c616ce3ede2dcb08 547 PANTHER PTHR12147 483 537 1.1E-132 T 20-04-2016 AMC99_RS11730 d4cf81e4a6500609c616ce3ede2dcb08 547 SUPERFAMILY SSF53187 24 70 2.23E-54 T 20-04-2016 AMC99_RS11730 d4cf81e4a6500609c616ce3ede2dcb08 547 SUPERFAMILY SSF53187 277 520 2.23E-54 T 20-04-2016 AMC99_RS11730 d4cf81e4a6500609c616ce3ede2dcb08 547 PANTHER PTHR12147:SF20 483 537 1.1E-132 T 20-04-2016 AMC99_RS11730 d4cf81e4a6500609c616ce3ede2dcb08 547 PANTHER PTHR12147 232 467 1.1E-132 T 20-04-2016 AMC99_RS11730 d4cf81e4a6500609c616ce3ede2dcb08 547 PANTHER PTHR12147 26 159 1.1E-132 T 20-04-2016 AMC99_RS07455 3cc181ce5a8d1e5f85e784929bff6d5c 61 SUPERFAMILY SSF55129 5 59 9.03E-16 T 20-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMC99_RS07455 3cc181ce5a8d1e5f85e784929bff6d5c 61 PANTHER PTHR15892 6 59 4.5E-16 T 20-04-2016 AMC99_RS07455 3cc181ce5a8d1e5f85e784929bff6d5c 61 Gene3D G3DSA:3.30.1390.20 5 61 1.5E-23 T 20-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMC99_RS07455 3cc181ce5a8d1e5f85e784929bff6d5c 61 PANTHER PTHR15892:SF2 6 59 4.5E-16 T 20-04-2016 AMC99_RS07455 3cc181ce5a8d1e5f85e784929bff6d5c 61 PIRSF PIRSF002211 1 61 4.3E-20 T 20-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMC99_RS07455 3cc181ce5a8d1e5f85e784929bff6d5c 61 Pfam PF00327 Ribosomal protein L30p/L7e 7 57 6.6E-13 T 20-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMC99_RS07455 3cc181ce5a8d1e5f85e784929bff6d5c 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 61 14.3 T 20-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMC99_RS07455 3cc181ce5a8d1e5f85e784929bff6d5c 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 7 61 2.6E-20 T 20-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMC99_RS12880 89523e5c870ef3a698ed326f4404883b 399 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 395 9.0E-155 T 20-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMC99_RS12880 89523e5c870ef3a698ed326f4404883b 399 Pfam PF00549 CoA-ligase 272 391 6.1E-27 T 20-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMC99_RS12880 89523e5c870ef3a698ed326f4404883b 399 PIRSF PIRSF001554 1 398 2.8E-148 T 20-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMC99_RS12880 89523e5c870ef3a698ed326f4404883b 399 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 267 291 - T 20-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMC99_RS12880 89523e5c870ef3a698ed326f4404883b 399 Pfam PF08442 ATP-grasp domain 2 213 1.2E-73 T 20-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMC99_RS12880 89523e5c870ef3a698ed326f4404883b 399 PANTHER PTHR11815 1 399 3.6E-230 T 20-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMC99_RS12880 89523e5c870ef3a698ed326f4404883b 399 SUPERFAMILY SSF52210 249 394 3.27E-54 T 20-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMC99_RS12880 89523e5c870ef3a698ed326f4404883b 399 SUPERFAMILY SSF56059 1 248 4.65E-78 T 20-04-2016 AMC99_RS12880 89523e5c870ef3a698ed326f4404883b 399 Gene3D G3DSA:3.40.50.261 251 392 3.3E-65 T 20-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMC99_RS12880 89523e5c870ef3a698ed326f4404883b 399 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 396 41.36 T 20-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMC99_RS12880 89523e5c870ef3a698ed326f4404883b 399 Gene3D G3DSA:3.30.470.20 106 249 4.3E-58 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMC99_RS12880 89523e5c870ef3a698ed326f4404883b 399 Gene3D G3DSA:3.30.1490.20 22 105 1.8E-30 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS11090 1a127b1e3103fbba3eb62237790f7703 310 SUPERFAMILY SSF52833 18 112 7.05E-31 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS11090 1a127b1e3103fbba3eb62237790f7703 310 Pfam PF14561 Tetratricopeptide repeat 223 309 6.0E-25 T 20-04-2016 AMC99_RS11090 1a127b1e3103fbba3eb62237790f7703 310 Pfam PF14559 Tetratricopeptide repeat 147 198 4.5E-9 T 20-04-2016 AMC99_RS11090 1a127b1e3103fbba3eb62237790f7703 310 Gene3D G3DSA:1.25.40.10 138 196 3.9E-8 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS11090 1a127b1e3103fbba3eb62237790f7703 310 SUPERFAMILY SSF48452 136 196 2.9E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS11090 1a127b1e3103fbba3eb62237790f7703 310 Pfam PF00085 Thioredoxin 12 110 2.7E-26 T 20-04-2016 IPR013766 Thioredoxin domain GO:0045454 AMC99_RS11090 1a127b1e3103fbba3eb62237790f7703 310 Gene3D G3DSA:3.40.30.10 13 113 7.5E-31 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS11090 1a127b1e3103fbba3eb62237790f7703 310 Gene3D G3DSA:1.25.40.10 223 309 5.3E-24 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS11090 1a127b1e3103fbba3eb62237790f7703 310 PANTHER PTHR10438 11 114 1.0E-30 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMC99_RS11090 1a127b1e3103fbba3eb62237790f7703 310 PANTHER PTHR10438 232 253 1.0E-30 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMC99_RS11090 1a127b1e3103fbba3eb62237790f7703 310 ProSitePatterns PS00194 Thioredoxin family active site. 28 46 - T 20-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 AMC99_RS11090 1a127b1e3103fbba3eb62237790f7703 310 PANTHER PTHR10438:SF264 11 114 1.0E-30 T 20-04-2016 AMC99_RS11090 1a127b1e3103fbba3eb62237790f7703 310 PANTHER PTHR10438:SF264 232 253 1.0E-30 T 20-04-2016 AMC99_RS01395 c66de021b971453a94612c93f511a21d 296 SUPERFAMILY SSF56601 34 279 4.23E-55 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS01395 c66de021b971453a94612c93f511a21d 296 Gene3D G3DSA:3.40.710.10 31 292 2.3E-71 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS01395 c66de021b971453a94612c93f511a21d 296 PRINTS PR00118 Beta-lactamase class A signature 142 166 7.2E-47 T 20-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_RS01395 c66de021b971453a94612c93f511a21d 296 PRINTS PR00118 Beta-lactamase class A signature 106 131 7.2E-47 T 20-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_RS01395 c66de021b971453a94612c93f511a21d 296 PRINTS PR00118 Beta-lactamase class A signature 64 81 7.2E-47 T 20-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_RS01395 c66de021b971453a94612c93f511a21d 296 PRINTS PR00118 Beta-lactamase class A signature 33 57 7.2E-47 T 20-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_RS01395 c66de021b971453a94612c93f511a21d 296 PRINTS PR00118 Beta-lactamase class A signature 168 193 7.2E-47 T 20-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_RS01395 c66de021b971453a94612c93f511a21d 296 PRINTS PR00118 Beta-lactamase class A signature 204 219 7.2E-47 T 20-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_RS01395 c66de021b971453a94612c93f511a21d 296 PRINTS PR00118 Beta-lactamase class A signature 221 236 7.2E-47 T 20-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_RS01395 c66de021b971453a94612c93f511a21d 296 PANTHER PTHR35333:SF2 29 293 6.3E-53 T 20-04-2016 AMC99_RS01395 c66de021b971453a94612c93f511a21d 296 Pfam PF13354 Beta-lactamase enzyme family 54 264 1.9E-30 T 20-04-2016 AMC99_RS01395 c66de021b971453a94612c93f511a21d 296 PANTHER PTHR35333 29 293 6.3E-53 T 20-04-2016 AMC99_RS13030 8d931f10f1d4211a4cc0e983c9876c80 259 Pfam PF00196 Bacterial regulatory proteins, luxR family 182 236 1.9E-16 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS13030 8d931f10f1d4211a4cc0e983c9876c80 259 SUPERFAMILY SSF46894 176 242 1.09E-18 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_RS13030 8d931f10f1d4211a4cc0e983c9876c80 259 Gene3D G3DSA:1.10.10.10 185 242 2.6E-23 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS13030 8d931f10f1d4211a4cc0e983c9876c80 259 Pfam PF03472 Autoinducer binding domain 27 165 1.0E-15 T 20-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMC99_RS13030 8d931f10f1d4211a4cc0e983c9876c80 259 SMART SM00421 179 236 1.2E-19 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS13030 8d931f10f1d4211a4cc0e983c9876c80 259 ProSitePatterns PS00622 LuxR-type HTH domain signature. 196 223 - T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS13030 8d931f10f1d4211a4cc0e983c9876c80 259 PANTHER PTHR26402 181 237 1.2E-13 T 20-04-2016 AMC99_RS13030 8d931f10f1d4211a4cc0e983c9876c80 259 SUPERFAMILY SSF75516 10 172 9.55E-18 T 20-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMC99_RS13030 8d931f10f1d4211a4cc0e983c9876c80 259 Gene3D G3DSA:3.30.450.80 13 184 1.5E-16 T 20-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMC99_RS13030 8d931f10f1d4211a4cc0e983c9876c80 259 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 224 5.5E-8 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS13030 8d931f10f1d4211a4cc0e983c9876c80 259 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 212 5.5E-8 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS13030 8d931f10f1d4211a4cc0e983c9876c80 259 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 196 5.5E-8 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS05395 e558c84d54a9dccdefd68fd3c9bdf825 64 PANTHER PTHR10245 1 61 2.7E-22 T 20-04-2016 AMC99_RS05395 e558c84d54a9dccdefd68fd3c9bdf825 64 SMART SM00530 4 59 2.9E-17 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS05395 e558c84d54a9dccdefd68fd3c9bdf825 64 Gene3D G3DSA:1.10.260.40 1 62 1.0E-23 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS05395 e558c84d54a9dccdefd68fd3c9bdf825 64 Pfam PF01381 Helix-turn-helix 5 58 1.6E-14 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS05395 e558c84d54a9dccdefd68fd3c9bdf825 64 PANTHER PTHR10245:SF26 1 61 2.7E-22 T 20-04-2016 AMC99_RS05395 e558c84d54a9dccdefd68fd3c9bdf825 64 SUPERFAMILY SSF47413 2 60 2.95E-18 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS09300 b13a05007b555c009c9c88efff8d77dc 417 Gene3D G3DSA:3.30.70.260 336 405 4.3E-8 T 20-04-2016 AMC99_RS09300 b13a05007b555c009c9c88efff8d77dc 417 PANTHER PTHR10314:SF17 12 368 1.3E-156 T 20-04-2016 AMC99_RS09300 b13a05007b555c009c9c88efff8d77dc 417 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 36 411 7.8E-130 T 20-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 AMC99_RS09300 b13a05007b555c009c9c88efff8d77dc 417 PANTHER PTHR10314 12 368 1.3E-156 T 20-04-2016 AMC99_RS09300 b13a05007b555c009c9c88efff8d77dc 417 Gene3D G3DSA:3.40.50.1100 84 334 5.5E-70 T 20-04-2016 AMC99_RS09300 b13a05007b555c009c9c88efff8d77dc 417 SUPERFAMILY SSF53686 18 366 1.7E-96 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_RS09300 b13a05007b555c009c9c88efff8d77dc 417 Pfam PF01842 ACT domain 340 405 2.9E-8 T 20-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMC99_RS09300 b13a05007b555c009c9c88efff8d77dc 417 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 316 2.1E-75 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 Pfam PF00593 TonB dependent receptor 658 992 9.8E-28 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 PANTHER PTHR30069:SF7 591 849 1.2E-35 T 20-04-2016 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 PANTHER PTHR30069:SF7 328 487 1.2E-35 T 20-04-2016 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 PANTHER PTHR30069:SF7 511 565 1.2E-35 T 20-04-2016 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 PANTHER PTHR30069:SF7 25 273 1.2E-35 T 20-04-2016 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 Gene3D G3DSA:2.170.130.10 55 170 4.7E-30 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 167 1.6E-21 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 PANTHER PTHR30069 591 849 1.2E-35 T 20-04-2016 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 PANTHER PTHR30069 328 487 1.2E-35 T 20-04-2016 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 PANTHER PTHR30069 511 565 1.2E-35 T 20-04-2016 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 PANTHER PTHR30069 25 273 1.2E-35 T 20-04-2016 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 Gene3D G3DSA:2.40.170.20 288 357 1.4E-74 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 Gene3D G3DSA:2.40.170.20 497 772 1.4E-74 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 Gene3D G3DSA:2.40.170.20 804 994 1.4E-74 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 Gene3D G3DSA:2.40.170.20 413 460 1.4E-74 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 Gene3D G3DSA:2.40.170.20 171 229 1.4E-74 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 SUPERFAMILY SSF56935 418 479 2.5E-96 T 20-04-2016 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 SUPERFAMILY SSF56935 41 243 2.5E-96 T 20-04-2016 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 SUPERFAMILY SSF56935 533 751 2.5E-96 T 20-04-2016 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 SUPERFAMILY SSF56935 805 994 2.5E-96 T 20-04-2016 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 SUPERFAMILY SSF56935 311 359 2.5E-96 T 20-04-2016 AMC99_RS02300 c92f39397f351f6a7ec9e750cb5256f0 994 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 977 994 - T 20-04-2016 IPR010917 TonB-dependent receptor, conserved site AMC99_RS12050 7cf60075706474415396c4fd896fdec7 405 SUPERFAMILY SSF55874 219 366 4.58E-19 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS12050 7cf60075706474415396c4fd896fdec7 405 Pfam PF06580 Histidine kinase 163 243 2.2E-24 T 20-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AMC99_RS12050 7cf60075706474415396c4fd896fdec7 405 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 262 368 1.4E-8 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS12050 7cf60075706474415396c4fd896fdec7 405 PANTHER PTHR34220 30 373 4.5E-56 T 20-04-2016 AMC99_RS12050 7cf60075706474415396c4fd896fdec7 405 Gene3D G3DSA:3.30.565.10 218 370 3.5E-22 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS12050 7cf60075706474415396c4fd896fdec7 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 344 6.6E-5 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS12050 7cf60075706474415396c4fd896fdec7 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 366 6.6E-5 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS12050 7cf60075706474415396c4fd896fdec7 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 309 6.6E-5 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS11545 87532a306f19726b693f8508420c83f1 710 PANTHER PTHR11733 50 710 2.1E-165 T 20-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 AMC99_RS11545 87532a306f19726b693f8508420c83f1 710 Pfam PF01431 Peptidase family M13 504 707 4.3E-68 T 20-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMC99_RS11545 87532a306f19726b693f8508420c83f1 710 PANTHER PTHR11733:SF145 50 710 2.1E-165 T 20-04-2016 AMC99_RS11545 87532a306f19726b693f8508420c83f1 710 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 496 508 3.0E-20 T 20-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMC99_RS11545 87532a306f19726b693f8508420c83f1 710 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 514 526 3.0E-20 T 20-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMC99_RS11545 87532a306f19726b693f8508420c83f1 710 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 535 551 3.0E-20 T 20-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMC99_RS11545 87532a306f19726b693f8508420c83f1 710 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 608 619 3.0E-20 T 20-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMC99_RS11545 87532a306f19726b693f8508420c83f1 710 Gene3D G3DSA:3.40.390.10 334 455 1.1E-103 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMC99_RS11545 87532a306f19726b693f8508420c83f1 710 Gene3D G3DSA:3.40.390.10 495 710 1.1E-103 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMC99_RS11545 87532a306f19726b693f8508420c83f1 710 SUPERFAMILY SSF55486 46 710 2.93E-185 T 20-04-2016 AMC99_RS11545 87532a306f19726b693f8508420c83f1 710 Pfam PF05649 Peptidase family M13 56 452 6.9E-77 T 20-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AMC99_RS10565 e818898496cbbd249c45158a3417e2f3 85 TIGRFAM TIGR03070 couple_hipB: transcriptional regulator, y4mF family 6 62 3.6E-23 T 20-04-2016 IPR017507 Transcription regulator, HipB-like AMC99_RS10565 e818898496cbbd249c45158a3417e2f3 85 Gene3D G3DSA:1.10.260.40 6 64 1.0E-11 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS10565 e818898496cbbd249c45158a3417e2f3 85 SUPERFAMILY SSF47413 3 63 9.12E-12 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS10565 e818898496cbbd249c45158a3417e2f3 85 SMART SM00530 10 65 1.8E-7 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS10565 e818898496cbbd249c45158a3417e2f3 85 Pfam PF01381 Helix-turn-helix 11 63 1.4E-8 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS09480 867b302c5feb56bdf3a0a5a6c7b27ee2 742 Gene3D G3DSA:2.30.120.10 310 372 1.2E-10 T 20-04-2016 AMC99_RS09480 867b302c5feb56bdf3a0a5a6c7b27ee2 742 PANTHER PTHR34218 4 635 1.8E-69 T 20-04-2016 AMC99_RS09480 867b302c5feb56bdf3a0a5a6c7b27ee2 742 Pfam PF01804 Penicillin amidase 44 729 5.5E-112 T 20-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 AMC99_RS09480 867b302c5feb56bdf3a0a5a6c7b27ee2 742 Gene3D G3DSA:1.10.439.10 34 172 2.1E-34 T 20-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 AMC99_RS09480 867b302c5feb56bdf3a0a5a6c7b27ee2 742 SUPERFAMILY SSF56235 229 739 1.14E-152 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS09480 867b302c5feb56bdf3a0a5a6c7b27ee2 742 SUPERFAMILY SSF56235 37 182 1.14E-152 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS09480 867b302c5feb56bdf3a0a5a6c7b27ee2 742 Gene3D G3DSA:3.60.20.10 210 309 1.5E-76 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS09480 867b302c5feb56bdf3a0a5a6c7b27ee2 742 Gene3D G3DSA:3.60.20.10 388 581 1.5E-76 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS10225 d6cc87edabb9bb2c236dc220ad51c1cb 332 Gene3D G3DSA:3.90.1200.10 112 322 2.7E-31 T 20-04-2016 AMC99_RS10225 d6cc87edabb9bb2c236dc220ad51c1cb 332 PANTHER PTHR21310:SF14 20 283 1.7E-20 T 20-04-2016 AMC99_RS10225 d6cc87edabb9bb2c236dc220ad51c1cb 332 SUPERFAMILY SSF56112 11 324 1.65E-50 T 20-04-2016 IPR011009 Protein kinase-like domain AMC99_RS10225 d6cc87edabb9bb2c236dc220ad51c1cb 332 PANTHER PTHR21310 20 283 1.7E-20 T 20-04-2016 AMC99_RS10225 d6cc87edabb9bb2c236dc220ad51c1cb 332 Pfam PF01636 Phosphotransferase enzyme family 17 245 7.1E-40 T 20-04-2016 IPR002575 Aminoglycoside phosphotransferase AMC99_RS03385 089c218daa4ede427e682a29eb351601 154 SUPERFAMILY SSF54637 10 152 4.37E-45 T 20-04-2016 IPR029069 HotDog domain AMC99_RS03385 089c218daa4ede427e682a29eb351601 154 Pfam PF07977 FabA-like domain 19 143 3.2E-34 T 20-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AMC99_RS03385 089c218daa4ede427e682a29eb351601 154 PANTHER PTHR30272 1 153 4.3E-65 T 20-04-2016 AMC99_RS03385 089c218daa4ede427e682a29eb351601 154 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 11 149 3.8E-55 T 20-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AMC99_RS03385 089c218daa4ede427e682a29eb351601 154 Gene3D G3DSA:3.10.129.10 8 150 7.2E-53 T 20-04-2016 IPR029069 HotDog domain AMC99_RS03385 089c218daa4ede427e682a29eb351601 154 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 10 151 32.601 T 20-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AMC99_RS00895 7e0ac0d2d0d6a0b284f4c94887040537 232 Pfam PF02563 Polysaccharide biosynthesis/export protein 45 120 8.5E-17 T 20-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMC99_RS00895 7e0ac0d2d0d6a0b284f4c94887040537 232 PANTHER PTHR33619 45 205 5.9E-33 T 20-04-2016 AMC99_RS00895 7e0ac0d2d0d6a0b284f4c94887040537 232 Gene3D G3DSA:3.10.560.10 119 206 1.4E-13 T 20-04-2016 AMC99_RS00895 7e0ac0d2d0d6a0b284f4c94887040537 232 Pfam PF10531 SLBB domain 127 178 6.9E-10 T 20-04-2016 IPR019554 Soluble ligand binding domain AMC99_RS00895 7e0ac0d2d0d6a0b284f4c94887040537 232 Gene3D G3DSA:3.30.1950.10 53 118 6.9E-14 T 20-04-2016 AMC99_RS11220 d19bbfbfa17e3d734575981a2f9d9e76 324 SUPERFAMILY SSF51412 1 318 4.19E-67 T 20-04-2016 AMC99_RS11220 d19bbfbfa17e3d734575981a2f9d9e76 324 PANTHER PTHR32332:SF22 1 321 3.3E-183 T 20-04-2016 AMC99_RS11220 d19bbfbfa17e3d734575981a2f9d9e76 324 Gene3D G3DSA:3.20.20.70 1 304 6.2E-72 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS11220 d19bbfbfa17e3d734575981a2f9d9e76 324 Pfam PF03060 Nitronate monooxygenase 3 308 1.2E-57 T 20-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMC99_RS11220 d19bbfbfa17e3d734575981a2f9d9e76 324 PANTHER PTHR32332 1 321 3.3E-183 T 20-04-2016 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 23 178 1.6E-22 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 Gene3D G3DSA:3.30.565.10 6 218 8.8E-82 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 SUPERFAMILY SSF56719 401 566 1.05E-83 T 20-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 SUPERFAMILY SSF56719 747 813 1.05E-83 T 20-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 SMART SM00433 26 814 6.6E-243 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR01159 DNA gyrase subunit B signature 368 382 8.4E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR01159 DNA gyrase subunit B signature 382 402 8.4E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR01159 DNA gyrase subunit B signature 320 336 8.4E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR01159 DNA gyrase subunit B signature 202 215 8.4E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR01159 DNA gyrase subunit B signature 228 250 8.4E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR01159 DNA gyrase subunit B signature 477 486 8.4E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR01159 DNA gyrase subunit B signature 774 786 8.4E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR01159 DNA gyrase subunit B signature 790 806 8.4E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR01159 DNA gyrase subunit B signature 187 202 8.4E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PANTHER PTHR10169 1 559 6.8E-280 T 20-04-2016 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PANTHER PTHR10169 738 821 6.8E-280 T 20-04-2016 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 SMART SM00387 22 181 2.3E-25 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 SUPERFAMILY SSF55874 1 218 2.6E-63 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 SUPERFAMILY SSF54211 229 399 1.18E-57 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 Pfam PF00204 DNA gyrase B 229 398 3.1E-58 T 20-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 ProSitePatterns PS00177 DNA topoisomerase II signature. 429 437 - T 20-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 1 821 94.881 T 20-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 Gene3D G3DSA:3.30.230.10 228 399 2.7E-73 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 749 810 1.8E-29 T 20-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR00418 DNA topoisomerase II family signature 61 74 8.8E-71 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR00418 DNA topoisomerase II family signature 531 543 8.8E-71 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR00418 DNA topoisomerase II family signature 26 41 8.8E-71 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR00418 DNA topoisomerase II family signature 493 509 8.8E-71 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR00418 DNA topoisomerase II family signature 427 441 8.8E-71 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR00418 DNA topoisomerase II family signature 753 769 8.8E-71 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR00418 DNA topoisomerase II family signature 108 122 8.8E-71 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR00418 DNA topoisomerase II family signature 276 289 8.8E-71 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 PRINTS PR00418 DNA topoisomerase II family signature 511 528 8.8E-71 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 Pfam PF01751 Toprim domain 426 536 7.2E-17 T 20-04-2016 IPR006171 Toprim domain AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 Gene3D G3DSA:3.40.50.670 411 556 2.7E-92 T 20-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 Gene3D G3DSA:3.40.50.670 738 803 2.7E-92 T 20-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS11265 fb2a2fece7f429bcc89bbe5f31a6e300 821 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 1 821 1.7E-283 T 20-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMC99_RS06645 badf975476604e0db795e78e23765336 554 PIRSF PIRSF003128 1 554 1.4E-149 T 20-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMC99_RS06645 badf975476604e0db795e78e23765336 554 Gene3D G3DSA:3.40.50.300 366 506 3.2E-6 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06645 badf975476604e0db795e78e23765336 554 Gene3D G3DSA:3.40.50.300 1 207 3.4E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06645 badf975476604e0db795e78e23765336 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 3.1E-136 T 20-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMC99_RS06645 badf975476604e0db795e78e23765336 554 SUPERFAMILY SSF52540 1 216 7.64E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06645 badf975476604e0db795e78e23765336 554 SUPERFAMILY SSF52540 2 50 1.95E-24 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06645 badf975476604e0db795e78e23765336 554 SUPERFAMILY SSF52540 338 504 1.95E-24 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06645 badf975476604e0db795e78e23765336 554 PANTHER PTHR11059 2 552 1.9E-137 T 20-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMC99_RS06645 badf975476604e0db795e78e23765336 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 512 8.4E-16 T 20-04-2016 IPR003395 RecF/RecN/SMC, N-terminal AMC99_RS08620 71ae1db3e96e30db3b020d4ad9e916a3 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 89 1.4E-10 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMC99_RS08620 71ae1db3e96e30db3b020d4ad9e916a3 111 SUPERFAMILY SSF54292 4 102 1.67E-27 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMC99_RS08620 71ae1db3e96e30db3b020d4ad9e916a3 111 Gene3D G3DSA:3.10.20.30 3 102 2.0E-37 T 20-04-2016 IPR012675 Beta-grasp domain AMC99_RS08620 71ae1db3e96e30db3b020d4ad9e916a3 111 PANTHER PTHR23426 3 110 1.0E-38 T 20-04-2016 AMC99_RS08620 71ae1db3e96e30db3b020d4ad9e916a3 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 40 50 - T 20-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 AMC99_RS08620 71ae1db3e96e30db3b020d4ad9e916a3 111 PRINTS PR00355 Adrenodoxin signature 82 90 3.3E-10 T 20-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 AMC99_RS08620 71ae1db3e96e30db3b020d4ad9e916a3 111 PRINTS PR00355 Adrenodoxin signature 40 50 3.3E-10 T 20-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 AMC99_RS08620 71ae1db3e96e30db3b020d4ad9e916a3 111 PRINTS PR00355 Adrenodoxin signature 59 73 3.3E-10 T 20-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 AMC99_RS13730 e53837f787d51278e76295082af26961 489 Gene3D G3DSA:2.40.33.10 85 178 1.1E-25 T 20-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS13730 e53837f787d51278e76295082af26961 489 SUPERFAMILY SSF51621 177 349 8.72E-95 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS13730 e53837f787d51278e76295082af26961 489 SUPERFAMILY SSF51621 12 87 8.72E-95 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS13730 e53837f787d51278e76295082af26961 489 Pfam PF02887 Pyruvate kinase, alpha/beta domain 364 477 8.8E-29 T 20-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS13730 e53837f787d51278e76295082af26961 489 SUPERFAMILY SSF50800 82 176 9.24E-24 T 20-04-2016 IPR011037 Pyruvate kinase-like, insert domain AMC99_RS13730 e53837f787d51278e76295082af26961 489 PRINTS PR01050 Pyruvate kinase family signature 196 210 9.6E-62 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS13730 e53837f787d51278e76295082af26961 489 PRINTS PR01050 Pyruvate kinase family signature 71 87 9.6E-62 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS13730 e53837f787d51278e76295082af26961 489 PRINTS PR01050 Pyruvate kinase family signature 319 335 9.6E-62 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS13730 e53837f787d51278e76295082af26961 489 PRINTS PR01050 Pyruvate kinase family signature 223 249 9.6E-62 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS13730 e53837f787d51278e76295082af26961 489 PRINTS PR01050 Pyruvate kinase family signature 250 274 9.6E-62 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS13730 e53837f787d51278e76295082af26961 489 PRINTS PR01050 Pyruvate kinase family signature 300 318 9.6E-62 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS13730 e53837f787d51278e76295082af26961 489 PRINTS PR01050 Pyruvate kinase family signature 275 299 9.6E-62 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS13730 e53837f787d51278e76295082af26961 489 Gene3D G3DSA:3.40.1380.20 333 476 1.4E-40 T 20-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS13730 e53837f787d51278e76295082af26961 489 Pfam PF00224 Pyruvate kinase, barrel domain 14 344 2.3E-114 T 20-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS13730 e53837f787d51278e76295082af26961 489 PANTHER PTHR11817 14 478 2.7E-195 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS13730 e53837f787d51278e76295082af26961 489 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 14 478 5.5E-149 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS13730 e53837f787d51278e76295082af26961 489 Gene3D G3DSA:3.20.20.60 179 332 8.1E-96 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS13730 e53837f787d51278e76295082af26961 489 Gene3D G3DSA:3.20.20.60 14 84 8.1E-96 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS13730 e53837f787d51278e76295082af26961 489 SUPERFAMILY SSF52935 329 479 6.41E-35 T 20-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS13530 37b445cb0c72bcec4ed64eed3be03bc4 175 SUPERFAMILY SSF50324 4 174 3.92E-66 T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMC99_RS13530 37b445cb0c72bcec4ed64eed3be03bc4 175 PANTHER PTHR10286 6 174 9.0E-65 T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMC99_RS13530 37b445cb0c72bcec4ed64eed3be03bc4 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMC99_RS13530 37b445cb0c72bcec4ed64eed3be03bc4 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.347 T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMC99_RS13530 37b445cb0c72bcec4ed64eed3be03bc4 175 Gene3D G3DSA:3.90.80.10 4 174 8.0E-60 T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMC99_RS13530 37b445cb0c72bcec4ed64eed3be03bc4 175 Pfam PF00719 Inorganic pyrophosphatase 18 174 9.0E-53 T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SUPERFAMILY SSF54814 285 349 2.55E-16 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 12 348 9.9E-128 T 20-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Gene3D G3DSA:3.30.1480.10 10 132 1.3E-44 T 20-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Gene3D G3DSA:3.30.300.20 205 283 1.2E-36 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Gene3D G3DSA:1.10.150.20 509 530 7.7E-28 T 20-04-2016 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Gene3D G3DSA:1.10.150.20 360 424 4.6E-16 T 20-04-2016 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Gene3D G3DSA:1.10.150.20 435 477 7.7E-28 T 20-04-2016 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 9 424 29.952 T 20-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SUPERFAMILY SSF54814 207 284 4.38E-31 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Gene3D G3DSA:2.40.50.140 135 204 8.9E-25 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Pfam PF00575 S1 RNA binding domain 138 200 3.1E-7 T 20-04-2016 IPR003029 S1 domain GO:0003676 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Pfam PF08529 NusA N-terminal domain 11 131 7.9E-33 T 20-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 PANTHER PTHR22648 8 454 2.7E-166 T 20-04-2016 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SUPERFAMILY SSF47794 359 420 1.21E-13 T 20-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SUPERFAMILY SSF47794 435 477 2.83E-7 T 20-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Gene3D G3DSA:3.30.300.20 284 353 5.0E-32 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SUPERFAMILY SSF50249 138 205 2.5E-17 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Pfam PF13184 NusA-like KH domain 236 302 1.1E-27 T 20-04-2016 IPR025249 KH domain, NusA-like GO:0003723 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SMART SM00316 140 206 1.5E-8 T 20-04-2016 IPR022967 RNA-binding domain, S1 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 371 420 1.0E-16 T 20-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 PANTHER PTHR22648:SF0 8 454 2.7E-166 T 20-04-2016 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SUPERFAMILY SSF69705 10 132 1.31E-37 T 20-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SMART SM00322 236 299 5.4 T 20-04-2016 IPR004087 K Homology domain GO:0003676 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SMART SM00322 307 400 4.7E-5 T 20-04-2016 IPR004087 K Homology domain GO:0003676 AMC99_RS08225 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SUPERFAMILY SSF47794 509 527 2.83E-7 T 20-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 AMC99_RS09645 b9822373c6cb829e9895986ef904071d 253 Pfam PF09608 Putative transmembrane protein (Alph_Pro_TM) 24 252 1.0E-74 T 20-04-2016 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 Gene3D G3DSA:3.40.190.10 1 92 4.7E-28 T 20-04-2016 AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 PIRSF PIRSF001438 1 290 9.3E-91 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 210 267 2.5E-11 T 20-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 1 265 2.3E-82 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 1 196 3.2E-60 T 20-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 PRINTS PR00151 Porphobilinogen deaminase signature 127 144 1.8E-34 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 PRINTS PR00151 Porphobilinogen deaminase signature 108 125 1.8E-34 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 PRINTS PR00151 Porphobilinogen deaminase signature 62 81 1.8E-34 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 PRINTS PR00151 Porphobilinogen deaminase signature 213 230 1.8E-34 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 PRINTS PR00151 Porphobilinogen deaminase signature 31 51 1.8E-34 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 214 230 - T 20-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 PANTHER PTHR11557 1 274 1.3E-102 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 SUPERFAMILY SSF54782 203 276 5.89E-15 T 20-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 Gene3D G3DSA:3.40.190.10 93 182 1.6E-26 T 20-04-2016 AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 SUPERFAMILY SSF53850 1 202 4.89E-57 T 20-04-2016 AMC99_RS03965 5f060d6177a39ea92ddac82ae579a8cd 293 Gene3D G3DSA:3.30.160.40 204 277 1.4E-14 T 20-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMC99_RS10655 7ef6ef99a95def6e728518b9b23813c3 230 ProSitePatterns PS01199 Ribosomal protein L1 signature. 118 137 - T 20-04-2016 IPR023673 Ribosomal protein L1, conserved site AMC99_RS10655 7ef6ef99a95def6e728518b9b23813c3 230 SUPERFAMILY SSF56808 8 224 2.09E-81 T 20-04-2016 IPR023674 Ribosomal protein L1-like AMC99_RS10655 7ef6ef99a95def6e728518b9b23813c3 230 PANTHER PTHR23105:SF5 18 227 3.5E-79 T 20-04-2016 AMC99_RS10655 7ef6ef99a95def6e728518b9b23813c3 230 Pfam PF00687 Ribosomal protein L1p/L10e family 30 218 7.0E-53 T 20-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AMC99_RS10655 7ef6ef99a95def6e728518b9b23813c3 230 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 226 5.6E-97 T 20-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMC99_RS10655 7ef6ef99a95def6e728518b9b23813c3 230 PIRSF PIRSF002155 1 225 5.4E-73 T 20-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMC99_RS10655 7ef6ef99a95def6e728518b9b23813c3 230 PANTHER PTHR23105 18 227 3.5E-79 T 20-04-2016 AMC99_RS10655 7ef6ef99a95def6e728518b9b23813c3 230 Gene3D G3DSA:3.30.190.20 16 66 1.1E-44 T 20-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 AMC99_RS10655 7ef6ef99a95def6e728518b9b23813c3 230 Gene3D G3DSA:3.30.190.20 159 225 1.1E-44 T 20-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 AMC99_RS10655 7ef6ef99a95def6e728518b9b23813c3 230 Gene3D G3DSA:3.40.50.790 67 157 3.8E-39 T 20-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AMC99_RS10655 7ef6ef99a95def6e728518b9b23813c3 230 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 227 42.167 T 20-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMC99_RS02620 9f78120385f841d97db186e420368ca3 351 Pfam PF10094 Uncharacterized protein conserved in bacteria (DUF2332) 11 348 1.2E-94 T 20-04-2016 IPR011200 Uncharacterised conserved protein UCP012608 AMC99_RS02620 9f78120385f841d97db186e420368ca3 351 PIRSF PIRSF012608 4 351 1.6E-79 T 20-04-2016 IPR011200 Uncharacterised conserved protein UCP012608 AMC99_RS02865 52854af85ee85191d4bf4390797b946a 246 PANTHER PTHR22602:SF0 1 237 4.0E-49 T 20-04-2016 AMC99_RS02865 52854af85ee85191d4bf4390797b946a 246 Gene3D G3DSA:3.30.70.1400 19 96 4.5E-19 T 20-04-2016 AMC99_RS02865 52854af85ee85191d4bf4390797b946a 246 PANTHER PTHR22602 1 237 4.0E-49 T 20-04-2016 AMC99_RS02865 52854af85ee85191d4bf4390797b946a 246 SUPERFAMILY SSF103025 19 190 1.43E-38 T 20-04-2016 AMC99_RS02865 52854af85ee85191d4bf4390797b946a 246 Pfam PF01571 Aminomethyltransferase folate-binding domain 19 95 1.2E-4 T 20-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal AMC99_RS02865 52854af85ee85191d4bf4390797b946a 246 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 138 200 6.9E-20 T 20-04-2016 IPR017703 YgfZ/GcvT conserved site AMC99_RS07460 0da04f452f620ecfecb93ed997523679 252 Gene3D G3DSA:3.30.160.20 77 140 2.0E-27 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain AMC99_RS07460 0da04f452f620ecfecb93ed997523679 252 Pfam PF03719 Ribosomal protein S5, C-terminal domain 155 225 2.9E-28 T 20-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AMC99_RS07460 0da04f452f620ecfecb93ed997523679 252 SUPERFAMILY SSF54768 75 143 3.98E-22 T 20-04-2016 AMC99_RS07460 0da04f452f620ecfecb93ed997523679 252 ProSitePatterns PS00585 Ribosomal protein S5 signature. 95 127 - T 20-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site AMC99_RS07460 0da04f452f620ecfecb93ed997523679 252 PANTHER PTHR13718 43 232 4.9E-63 T 20-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07460 0da04f452f620ecfecb93ed997523679 252 SUPERFAMILY SSF54211 147 227 1.11E-23 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS07460 0da04f452f620ecfecb93ed997523679 252 Gene3D G3DSA:3.30.230.10 143 227 2.3E-31 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_RS07460 0da04f452f620ecfecb93ed997523679 252 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 78 229 2.1E-62 T 20-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMC99_RS07460 0da04f452f620ecfecb93ed997523679 252 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 38 231 34.576 T 20-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMC99_RS07460 0da04f452f620ecfecb93ed997523679 252 Pfam PF00333 Ribosomal protein S5, N-terminal domain 80 142 7.0E-27 T 20-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 Gene3D G3DSA:3.10.20.30 384 445 5.8E-21 T 20-04-2016 IPR012675 Beta-grasp domain AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 SMART SM00471 41 153 5.9E-10 T 20-04-2016 IPR003607 HD/PDEase domain AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 PANTHER PTHR21262:SF0 1 696 3.7E-268 T 20-04-2016 AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 SUPERFAMILY SSF81301 193 360 4.09E-58 T 20-04-2016 AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 693 6.9E-201 T 20-04-2016 IPR004811 RelA/SpoT family GO:0015969 AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 PANTHER PTHR21262 1 696 3.7E-268 T 20-04-2016 AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 Pfam PF04607 Region found in RelA / SpoT proteins 236 345 2.3E-36 T 20-04-2016 IPR007685 RelA/SpoT GO:0015969 AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 SUPERFAMILY SSF109604 6 191 3.3E-64 T 20-04-2016 AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 Pfam PF02824 TGS domain 384 443 1.0E-20 T 20-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 Gene3D G3DSA:3.30.460.10 193 326 3.0E-46 T 20-04-2016 AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 Pfam PF13291 ACT domain 622 695 6.9E-12 T 20-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 SUPERFAMILY SSF81271 374 443 8.07E-20 T 20-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 Gene3D G3DSA:3.30.70.260 624 690 1.5E-10 T 20-04-2016 AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 SUPERFAMILY SSF55021 625 694 1.41E-7 T 20-04-2016 AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 SMART SM00954 236 346 9.7E-63 T 20-04-2016 IPR007685 RelA/SpoT GO:0015969 AMC99_RS02220 83c4f7f1838a8d716865a6a018bb2b0a 696 Pfam PF13328 HD domain 26 176 1.0E-49 T 20-04-2016 IPR003607 HD/PDEase domain AMC99_RS02670 948fa93dede7d35cfbc2c78e1f6c03bd 230 PANTHER PTHR33204 8 112 4.2E-28 T 20-04-2016 AMC99_RS02670 948fa93dede7d35cfbc2c78e1f6c03bd 230 Pfam PF01638 HxlR-like helix-turn-helix 29 113 2.8E-22 T 20-04-2016 IPR002577 Helix-turn-helix, HxlR type AMC99_RS02670 948fa93dede7d35cfbc2c78e1f6c03bd 230 SUPERFAMILY SSF46785 16 112 1.08E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS02670 948fa93dede7d35cfbc2c78e1f6c03bd 230 Gene3D G3DSA:1.10.10.10 7 112 3.9E-28 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS02670 948fa93dede7d35cfbc2c78e1f6c03bd 230 SUPERFAMILY SSF55718 128 227 4.71E-7 T 20-04-2016 IPR003033 SCP2 sterol-binding domain AMC99_RS11420 7afb508ff7bff131e067141330db3b61 484 SUPERFAMILY SSF55874 325 481 4.45E-34 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS11420 7afb508ff7bff131e067141330db3b61 484 SUPERFAMILY SSF47384 261 334 8.44E-10 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS11420 7afb508ff7bff131e067141330db3b61 484 SMART SM00387 375 484 8.9E-29 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS11420 7afb508ff7bff131e067141330db3b61 484 SMART SM00388 278 336 2.1E-6 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS11420 7afb508ff7bff131e067141330db3b61 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 482 3.6E-18 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS11420 7afb508ff7bff131e067141330db3b61 484 Gene3D G3DSA:3.30.565.10 322 481 1.5E-33 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS11420 7afb508ff7bff131e067141330db3b61 484 Pfam PF00672 HAMP domain 205 272 4.5E-9 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMC99_RS11420 7afb508ff7bff131e067141330db3b61 484 PANTHER PTHR24423 218 481 8.1E-49 T 20-04-2016 AMC99_RS11420 7afb508ff7bff131e067141330db3b61 484 PANTHER PTHR24423 113 137 8.1E-49 T 20-04-2016 AMC99_RS11420 7afb508ff7bff131e067141330db3b61 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 481 2.5E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS11420 7afb508ff7bff131e067141330db3b61 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 2.5E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS11420 7afb508ff7bff131e067141330db3b61 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 2.5E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS11420 7afb508ff7bff131e067141330db3b61 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 462 2.5E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS11420 7afb508ff7bff131e067141330db3b61 484 Gene3D G3DSA:1.10.287.130 270 321 5.9E-10 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS11420 7afb508ff7bff131e067141330db3b61 484 SMART SM00304 224 277 0.0075 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMC99_RS05945 fd9180dcf21e58937c7027a525036b08 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 238 1.4E-53 T 20-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMC99_RS05945 fd9180dcf21e58937c7027a525036b08 253 Pfam PF00121 Triosephosphate isomerase 6 243 2.4E-82 T 20-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMC99_RS05945 fd9180dcf21e58937c7027a525036b08 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 247 36.514 T 20-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMC99_RS05945 fd9180dcf21e58937c7027a525036b08 253 Gene3D G3DSA:3.20.20.70 3 245 7.0E-91 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS05945 fd9180dcf21e58937c7027a525036b08 253 SUPERFAMILY SSF51351 2 244 4.19E-83 T 20-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMC99_RS05945 fd9180dcf21e58937c7027a525036b08 253 PANTHER PTHR21139 1 243 2.0E-97 T 20-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMC99_RS05945 fd9180dcf21e58937c7027a525036b08 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 162 172 - T 20-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMC99_RS13310 a603e14352e3615bae75902ddf5a2a45 137 Gene3D G3DSA:3.90.1720.10 2 119 2.7E-15 T 20-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMC99_RS13310 a603e14352e3615bae75902ddf5a2a45 137 SUPERFAMILY SSF54001 2 120 2.49E-10 T 20-04-2016 AMC99_RS12855 6283397732ed04ca62921e063f68a16d 407 Pfam PF04286 Protein of unknown function (DUF445) 36 403 6.4E-100 T 20-04-2016 IPR007383 Protein of unknown function DUF445 AMC99_RS12855 6283397732ed04ca62921e063f68a16d 407 PANTHER PTHR38442 1 407 1.9E-104 T 20-04-2016 AMC99_RS03660 d85ea1a5c4d6acbe2119e547d61c5a22 822 PANTHER PTHR32552:SF33 538 822 1.3E-54 T 20-04-2016 AMC99_RS03660 d85ea1a5c4d6acbe2119e547d61c5a22 822 PANTHER PTHR32552:SF33 7 493 1.3E-54 T 20-04-2016 AMC99_RS03660 d85ea1a5c4d6acbe2119e547d61c5a22 822 Gene3D G3DSA:2.40.170.20 164 491 1.5E-81 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS03660 d85ea1a5c4d6acbe2119e547d61c5a22 822 Gene3D G3DSA:2.40.170.20 539 822 1.5E-81 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS03660 d85ea1a5c4d6acbe2119e547d61c5a22 822 SUPERFAMILY SSF56935 30 496 8.06E-106 T 20-04-2016 AMC99_RS03660 d85ea1a5c4d6acbe2119e547d61c5a22 822 SUPERFAMILY SSF56935 544 822 8.06E-106 T 20-04-2016 AMC99_RS03660 d85ea1a5c4d6acbe2119e547d61c5a22 822 Pfam PF00593 TonB dependent receptor 554 821 4.7E-28 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS03660 d85ea1a5c4d6acbe2119e547d61c5a22 822 Gene3D G3DSA:2.170.130.10 30 161 2.6E-23 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS03660 d85ea1a5c4d6acbe2119e547d61c5a22 822 PANTHER PTHR32552 538 822 1.3E-54 T 20-04-2016 AMC99_RS03660 d85ea1a5c4d6acbe2119e547d61c5a22 822 PANTHER PTHR32552 7 493 1.3E-54 T 20-04-2016 AMC99_RS03660 d85ea1a5c4d6acbe2119e547d61c5a22 822 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 151 6.6E-8 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 PANTHER PTHR24322 151 182 3.0E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 PANTHER PTHR24322 14 135 3.0E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.8E-6 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.8E-6 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.8E-6 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 244 7.0E-51 T 20-04-2016 AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 4.7E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.7E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.7E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.7E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.7E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 4.7E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 PANTHER PTHR24322:SF592 151 182 3.0E-40 T 20-04-2016 AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 PANTHER PTHR24322:SF592 14 135 3.0E-40 T 20-04-2016 AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 SUPERFAMILY SSF51735 5 244 8.11E-64 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 Gene3D G3DSA:3.40.50.720 6 245 5.5E-66 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS10220 3c750630a60131cd60961d05366852b2 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS09090 f2fa2e12e3e2f4f46b4d74525acc603e 328 Gene3D G3DSA:3.30.470.20 91 108 3.7E-41 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMC99_RS09090 f2fa2e12e3e2f4f46b4d74525acc603e 328 Gene3D G3DSA:3.30.470.20 180 312 3.7E-41 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMC99_RS09090 f2fa2e12e3e2f4f46b4d74525acc603e 328 Pfam PF07478 D-ala D-ala ligase C-terminus 136 309 3.1E-37 T 20-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09090 f2fa2e12e3e2f4f46b4d74525acc603e 328 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 8 313 31.658 T 20-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09090 f2fa2e12e3e2f4f46b4d74525acc603e 328 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 68 79 - T 20-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09090 f2fa2e12e3e2f4f46b4d74525acc603e 328 Pfam PF01820 D-ala D-ala ligase N-terminus 10 89 6.2E-21 T 20-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09090 f2fa2e12e3e2f4f46b4d74525acc603e 328 SUPERFAMILY SSF52440 7 101 7.96E-30 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS09090 f2fa2e12e3e2f4f46b4d74525acc603e 328 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 9 312 8.7E-75 T 20-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09090 f2fa2e12e3e2f4f46b4d74525acc603e 328 Gene3D G3DSA:3.30.1490.20 113 179 2.1E-6 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS09090 f2fa2e12e3e2f4f46b4d74525acc603e 328 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 252 283 - T 20-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09090 f2fa2e12e3e2f4f46b4d74525acc603e 328 SUPERFAMILY SSF56059 101 309 3.7E-45 T 20-04-2016 AMC99_RS09090 f2fa2e12e3e2f4f46b4d74525acc603e 328 Gene3D G3DSA:3.40.50.20 7 89 1.9E-28 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS09090 f2fa2e12e3e2f4f46b4d74525acc603e 328 PANTHER PTHR23132 7 317 1.6E-73 T 20-04-2016 AMC99_RS03575 a6770d009a03ce59c3df98e649e3b3da 192 PIRSF PIRSF035805 1 191 4.5E-55 T 20-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 AMC99_RS03575 a6770d009a03ce59c3df98e649e3b3da 192 Gene3D G3DSA:3.30.60.20 142 189 5.1E-18 T 20-04-2016 AMC99_RS03575 a6770d009a03ce59c3df98e649e3b3da 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 20-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 AMC99_RS03575 a6770d009a03ce59c3df98e649e3b3da 192 SUPERFAMILY SSF52540 1 141 5.32E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03575 a6770d009a03ce59c3df98e649e3b3da 192 Pfam PF00265 Thymidine kinase 2 186 2.4E-49 T 20-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 AMC99_RS03575 a6770d009a03ce59c3df98e649e3b3da 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 33.58 T 20-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 AMC99_RS03575 a6770d009a03ce59c3df98e649e3b3da 192 SUPERFAMILY SSF57716 142 189 1.14E-15 T 20-04-2016 AMC99_RS03575 a6770d009a03ce59c3df98e649e3b3da 192 PANTHER PTHR11441 1 190 3.2E-62 T 20-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 AMC99_RS03465 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 SUPERFAMILY SSF47364 17 97 7.53E-15 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMC99_RS03465 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 SMART SM00382 107 258 4.6E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS03465 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 Pfam PF02881 SRP54-type protein, helical bundle domain 23 88 6.1E-10 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMC99_RS03465 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 PANTHER PTHR11564 4 301 1.1E-115 T 20-04-2016 AMC99_RS03465 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 SMART SM00963 14 93 2.1E-13 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMC99_RS03465 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 Gene3D G3DSA:3.40.50.300 121 308 6.3E-74 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03465 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 PANTHER PTHR11564:SF16 4 301 1.1E-115 T 20-04-2016 AMC99_RS03465 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 37 309 56.433 T 20-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMC99_RS03465 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 SMART SM00962 108 309 2.8E-107 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMC99_RS03465 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 Gene3D G3DSA:1.20.120.140 39 120 3.3E-23 T 20-04-2016 AMC99_RS03465 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 SUPERFAMILY SSF52540 105 307 2.4E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03465 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 Pfam PF00448 SRP54-type protein, GTPase domain 108 306 1.5E-72 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMC99_RS03465 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 39 301 1.1E-96 T 20-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMC99_RS05990 e3260001613b92c41bbbb71a52849114 390 Gene3D G3DSA:2.170.190.11 47 134 1.4E-21 T 20-04-2016 AMC99_RS05990 e3260001613b92c41bbbb71a52849114 390 SUPERFAMILY SSF63867 320 390 2.62E-13 T 20-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS05990 e3260001613b92c41bbbb71a52849114 390 SMART SM00852 173 310 8.1E-35 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS05990 e3260001613b92c41bbbb71a52849114 390 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 170 304 7.1E-26 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS05990 e3260001613b92c41bbbb71a52849114 390 PANTHER PTHR10192 4 390 3.3E-122 T 20-04-2016 AMC99_RS05990 e3260001613b92c41bbbb71a52849114 390 Gene3D G3DSA:3.90.105.10 135 154 3.7E-10 T 20-04-2016 AMC99_RS05990 e3260001613b92c41bbbb71a52849114 390 Gene3D G3DSA:3.90.105.10 25 46 3.7E-10 T 20-04-2016 AMC99_RS05990 e3260001613b92c41bbbb71a52849114 390 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 245 279 - T 20-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 AMC99_RS05990 e3260001613b92c41bbbb71a52849114 390 Pfam PF03454 MoeA C-terminal region (domain IV) 324 390 1.2E-12 T 20-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS05990 e3260001613b92c41bbbb71a52849114 390 SUPERFAMILY SSF63882 3 168 5.89E-45 T 20-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS05990 e3260001613b92c41bbbb71a52849114 390 Pfam PF03453 MoeA N-terminal region (domain I and II) 6 158 1.9E-31 T 20-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS05990 e3260001613b92c41bbbb71a52849114 390 SUPERFAMILY SSF53218 170 313 3.14E-38 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS05990 e3260001613b92c41bbbb71a52849114 390 Gene3D G3DSA:3.40.980.10 155 323 2.2E-52 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS05990 e3260001613b92c41bbbb71a52849114 390 Gene3D G3DSA:2.40.340.10 324 387 2.7E-10 T 20-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS05990 e3260001613b92c41bbbb71a52849114 390 Pfam PF00994 Probable molybdopterin binding domain 174 308 5.0E-24 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS07990 c90d447329e80575f8bae5a62a27008a 351 PIRSF PIRSF002465 3 341 1.7E-119 T 20-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 AMC99_RS07990 c90d447329e80575f8bae5a62a27008a 351 Pfam PF02504 Fatty acid synthesis protein 5 328 6.1E-104 T 20-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 AMC99_RS07990 c90d447329e80575f8bae5a62a27008a 351 Gene3D G3DSA:3.40.718.10 4 336 5.5E-123 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMC99_RS07990 c90d447329e80575f8bae5a62a27008a 351 PANTHER PTHR30100 2 344 1.5E-128 T 20-04-2016 AMC99_RS07990 c90d447329e80575f8bae5a62a27008a 351 PANTHER PTHR30100:SF1 2 344 1.5E-128 T 20-04-2016 AMC99_RS07990 c90d447329e80575f8bae5a62a27008a 351 SUPERFAMILY SSF53659 4 337 2.26E-98 T 20-04-2016 AMC99_RS07990 c90d447329e80575f8bae5a62a27008a 351 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 336 1.8E-102 T 20-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 AMC99_RS07990 c90d447329e80575f8bae5a62a27008a 351 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 343 136.295 T 20-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 SUPERFAMILY SSF50249 4 107 3.81E-30 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 PANTHER PTHR22594:SF5 2 305 6.5E-202 T 20-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 PANTHER PTHR22594:SF5 373 575 6.5E-202 T 20-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 Gene3D G3DSA:3.30.1360.30 285 417 6.0E-41 T 20-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 561 2.5E-90 T 20-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 SUPERFAMILY SSF55261 297 423 4.91E-34 T 20-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 Pfam PF01336 OB-fold nucleic acid binding domain 21 103 1.9E-14 T 20-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 5 588 7.0E-185 T 20-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 Gene3D G3DSA:2.40.50.140 4 108 1.6E-35 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 Pfam PF02938 GAD domain 316 407 5.0E-12 T 20-04-2016 IPR029351 GAD domain AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 522 536 1.2E-22 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 1.2E-22 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 478 494 1.2E-22 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 1.2E-22 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 SUPERFAMILY SSF55681 428 588 2.28E-91 T 20-04-2016 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 SUPERFAMILY SSF55681 113 300 2.28E-91 T 20-04-2016 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 4 567 32.636 T 20-04-2016 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 PANTHER PTHR22594 2 305 6.5E-202 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 PANTHER PTHR22594 373 575 6.5E-202 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 Gene3D G3DSA:3.30.930.10 418 588 8.0E-94 T 20-04-2016 AMC99_RS03525 97c1ae3b284c25d9408148bc8197bd02 598 Gene3D G3DSA:3.30.930.10 136 284 8.0E-94 T 20-04-2016 AMC99_RS04375 0d60ec21d29d107b354f1806381b188c 265 Hamap MF_00258 Glutamate racemase [murI]. 6 258 31.958 T 20-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS04375 0d60ec21d29d107b354f1806381b188c 265 SUPERFAMILY SSF53681 7 109 3.14E-29 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS04375 0d60ec21d29d107b354f1806381b188c 265 PANTHER PTHR21198 1 265 1.2E-70 T 20-04-2016 AMC99_RS04375 0d60ec21d29d107b354f1806381b188c 265 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 186 196 - T 20-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS04375 0d60ec21d29d107b354f1806381b188c 265 PANTHER PTHR21198:SF2 1 265 1.2E-70 T 20-04-2016 AMC99_RS04375 0d60ec21d29d107b354f1806381b188c 265 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 221 1.8E-24 T 20-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS04375 0d60ec21d29d107b354f1806381b188c 265 TIGRFAM TIGR00067 glut_race: glutamate racemase 8 229 1.0E-57 T 20-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS04375 0d60ec21d29d107b354f1806381b188c 265 Gene3D G3DSA:3.40.50.1860 5 173 6.4E-43 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS04375 0d60ec21d29d107b354f1806381b188c 265 SUPERFAMILY SSF53681 111 261 3.92E-30 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Gene3D G3DSA:1.20.1640.10 303 519 5.7E-45 T 20-04-2016 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 7.2E-26 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 7.2E-26 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 PRINTS PR00702 Acriflavin resistance protein family signature 458 481 7.2E-26 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 PRINTS PR00702 Acriflavin resistance protein family signature 403 427 7.2E-26 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 PRINTS PR00702 Acriflavin resistance protein family signature 375 396 7.2E-26 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 PRINTS PR00702 Acriflavin resistance protein family signature 483 506 7.2E-26 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Pfam PF00873 AcrB/AcrD/AcrF family 14 1062 4.8E-149 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 SUPERFAMILY SSF82866 308 510 4.71E-37 T 20-04-2016 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Gene3D G3DSA:3.30.70.1430 581 688 1.0E-10 T 20-04-2016 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 SUPERFAMILY SSF82693 45 139 9.94E-17 T 20-04-2016 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 SUPERFAMILY SSF82693 156 190 1.92E-9 T 20-04-2016 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 SUPERFAMILY SSF82693 286 340 1.92E-9 T 20-04-2016 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 SUPERFAMILY SSF82693 575 688 1.88E-12 T 20-04-2016 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Gene3D G3DSA:3.30.70.1430 45 145 3.3E-17 T 20-04-2016 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Gene3D G3DSA:1.10.3850.10 834 1063 9.2E-61 T 20-04-2016 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 SUPERFAMILY SSF82714 192 272 7.98E-13 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 SUPERFAMILY SSF82866 827 1064 4.58E-41 T 20-04-2016 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 PANTHER PTHR32063 7 1068 0.0 T 20-04-2016 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 PANTHER PTHR32063:SF16 7 1068 0.0 T 20-04-2016 AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Gene3D G3DSA:3.30.2090.10 192 272 6.3E-12 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Gene3D G3DSA:3.30.2090.10 737 828 2.0E-6 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_RS03705 ce9d8c10d0df0ba1c2e83c89d7745126 1081 SUPERFAMILY SSF82714 737 828 2.35E-7 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_RS02050 ddf0c52c2a0de4dcad464122d168ca84 362 SMART SM00829 11 359 1.9E-5 T 20-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_RS02050 ddf0c52c2a0de4dcad464122d168ca84 362 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 148 5.7E-26 T 20-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_RS02050 ddf0c52c2a0de4dcad464122d168ca84 362 SUPERFAMILY SSF50129 314 361 2.59E-9 T 20-04-2016 IPR011032 GroES-like AMC99_RS02050 ddf0c52c2a0de4dcad464122d168ca84 362 Gene3D G3DSA:3.40.50.720 185 301 9.1E-34 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02050 ddf0c52c2a0de4dcad464122d168ca84 362 Pfam PF00107 Zinc-binding dehydrogenase 192 319 1.8E-24 T 20-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_RS02050 ddf0c52c2a0de4dcad464122d168ca84 362 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 20-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 AMC99_RS02050 ddf0c52c2a0de4dcad464122d168ca84 362 Gene3D G3DSA:3.90.180.10 2 184 1.2E-54 T 20-04-2016 IPR011032 GroES-like AMC99_RS02050 ddf0c52c2a0de4dcad464122d168ca84 362 SUPERFAMILY SSF50129 3 188 3.46E-55 T 20-04-2016 IPR011032 GroES-like AMC99_RS02050 ddf0c52c2a0de4dcad464122d168ca84 362 PANTHER PTHR11695 123 362 1.9E-105 T 20-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMC99_RS02050 ddf0c52c2a0de4dcad464122d168ca84 362 PANTHER PTHR11695 13 105 1.9E-105 T 20-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMC99_RS02050 ddf0c52c2a0de4dcad464122d168ca84 362 SUPERFAMILY SSF51735 154 325 1.53E-38 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02050 ddf0c52c2a0de4dcad464122d168ca84 362 PANTHER PTHR11695:SF269 123 362 1.9E-105 T 20-04-2016 AMC99_RS02050 ddf0c52c2a0de4dcad464122d168ca84 362 PANTHER PTHR11695:SF269 13 105 1.9E-105 T 20-04-2016 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 SUPERFAMILY SSF48113 23 433 3.68E-141 T 20-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 Gene3D G3DSA:1.10.420.10 581 707 4.0E-41 T 20-04-2016 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 25 733 3.3E-304 T 20-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 Gene3D G3DSA:1.10.520.10 49 202 2.4E-70 T 20-04-2016 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 Gene3D G3DSA:1.10.520.10 241 253 2.4E-70 T 20-04-2016 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 Gene3D G3DSA:1.10.520.10 711 732 2.1E-44 T 20-04-2016 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 Gene3D G3DSA:1.10.520.10 436 580 2.1E-44 T 20-04-2016 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 482 508 1.5E-42 T 20-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 69 94 1.5E-42 T 20-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 54 67 1.5E-42 T 20-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 269 292 1.5E-42 T 20-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 28 50 1.5E-42 T 20-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 Gene3D G3DSA:1.10.420.10 312 411 5.2E-47 T 20-04-2016 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 Gene3D G3DSA:1.10.420.10 254 276 5.2E-47 T 20-04-2016 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 Hamap MF_01961 Catalase-peroxidase [katG]. 7 733 38.023 T 20-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 ProSitePatterns PS00436 Peroxidases active site signature. 92 103 - T 20-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 Pfam PF00141 Peroxidase 79 400 5.3E-50 T 20-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 Pfam PF00141 Peroxidase 407 707 6.6E-33 T 20-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 SUPERFAMILY SSF48113 434 732 2.5E-90 T 20-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 PANTHER PTHR30555 1 733 0.0 T 20-04-2016 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 PRINTS PR00458 Haem peroxidase superfamily signature 152 169 4.9E-20 T 20-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 PRINTS PR00458 Haem peroxidase superfamily signature 320 335 4.9E-20 T 20-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 PRINTS PR00458 Haem peroxidase superfamily signature 261 276 4.9E-20 T 20-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 PRINTS PR00458 Haem peroxidase superfamily signature 92 106 4.9E-20 T 20-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 PRINTS PR00458 Haem peroxidase superfamily signature 170 182 4.9E-20 T 20-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_RS01270 6bf6cd0422596b061088980749043573 738 PANTHER PTHR30555:SF0 1 733 0.0 T 20-04-2016 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 416 572 3.9E-9 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 172 1.5E-23 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 613 652 4.8E-9 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 PANTHER PTHR11946 1 207 0.0 T 20-04-2016 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 PANTHER PTHR11946 240 265 0.0 T 20-04-2016 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 PANTHER PTHR11946 283 574 0.0 T 20-04-2016 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 PANTHER PTHR11946 612 836 0.0 T 20-04-2016 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 Gene3D G3DSA:3.40.50.620 424 573 4.0E-148 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 Gene3D G3DSA:3.40.50.620 5 223 4.0E-148 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 Gene3D G3DSA:3.40.50.620 612 641 4.0E-148 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 SUPERFAMILY SSF52374 6 227 1.25E-144 T 20-04-2016 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 SUPERFAMILY SSF52374 415 662 1.25E-144 T 20-04-2016 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 PANTHER PTHR11946:SF7 1 207 0.0 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 PANTHER PTHR11946:SF7 240 265 0.0 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 PANTHER PTHR11946:SF7 283 574 0.0 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 PANTHER PTHR11946:SF7 612 836 0.0 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 216 235 4.2E-48 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 154 170 4.2E-48 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 4.2E-48 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 128 145 4.2E-48 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 4.2E-48 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 486 504 4.2E-48 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 4.2E-48 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 SUPERFAMILY SSF50677 224 418 2.51E-46 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 222 402 8.3E-63 T 20-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 Gene3D G3DSA:1.10.730.10 642 773 1.5E-38 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 Gene3D G3DSA:3.90.740.10 224 423 1.6E-50 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 SUPERFAMILY SSF47323 656 836 2.24E-35 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 5 837 22.487 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 12 836 0.0 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMC99_RS11660 7678057ae65c64b0ccf1f531352a94e4 837 Pfam PF08264 Anticodon-binding domain of tRNA 682 798 3.9E-15 T 20-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AMC99_RS10020 d40ee97bf1e12b327c2a2df7d3ffac77 319 SUPERFAMILY SSF103481 50 152 2.09E-8 T 20-04-2016 AMC99_RS10020 d40ee97bf1e12b327c2a2df7d3ffac77 319 Pfam PF00892 EamA-like transporter family 18 148 1.3E-9 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_RS10020 d40ee97bf1e12b327c2a2df7d3ffac77 319 Pfam PF00892 EamA-like transporter family 161 290 1.5E-11 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_RS10020 d40ee97bf1e12b327c2a2df7d3ffac77 319 PANTHER PTHR22911 3 318 6.1E-29 T 20-04-2016 AMC99_RS10020 d40ee97bf1e12b327c2a2df7d3ffac77 319 SUPERFAMILY SSF103481 195 293 3.6E-10 T 20-04-2016 AMC99_RS12785 5c4eccea676ffbe1b8f24708bf452511 277 PIRSF PIRSF035875 1 271 9.9E-63 T 20-04-2016 IPR017039 Virulence factor BrkB AMC99_RS12785 5c4eccea676ffbe1b8f24708bf452511 277 Pfam PF03631 Virulence factor BrkB 10 263 1.0E-42 T 20-04-2016 IPR017039 Virulence factor BrkB AMC99_RS12785 5c4eccea676ffbe1b8f24708bf452511 277 PANTHER PTHR30213 11 263 5.4E-27 T 20-04-2016 AMC99_RS05765 4ad4465dadad56b2ce5d6a52f50bf90b 432 Pfam PF13167 GTP-binding GTPase N-terminal 28 114 1.1E-24 T 20-04-2016 IPR025121 GTPase HflX, N-terminal AMC99_RS05765 4ad4465dadad56b2ce5d6a52f50bf90b 432 PIRSF PIRSF006809 6 430 5.7E-138 T 20-04-2016 IPR016496 GTPase HflX GO:0005525 AMC99_RS05765 4ad4465dadad56b2ce5d6a52f50bf90b 432 PANTHER PTHR10229:SF0 9 432 2.0E-161 T 20-04-2016 AMC99_RS05765 4ad4465dadad56b2ce5d6a52f50bf90b 432 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 204 224 9.1E-9 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS05765 4ad4465dadad56b2ce5d6a52f50bf90b 432 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 271 289 9.1E-9 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS05765 4ad4465dadad56b2ce5d6a52f50bf90b 432 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 225 243 9.1E-9 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS05765 4ad4465dadad56b2ce5d6a52f50bf90b 432 Pfam PF16360 GTP-binding GTPase Middle Region 117 196 1.7E-28 T 20-04-2016 IPR032305 GTP-binding protein, middle domain AMC99_RS05765 4ad4465dadad56b2ce5d6a52f50bf90b 432 Gene3D G3DSA:3.40.50.300 203 374 2.6E-32 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05765 4ad4465dadad56b2ce5d6a52f50bf90b 432 Pfam PF01926 50S ribosome-binding GTPase 204 329 2.4E-17 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS05765 4ad4465dadad56b2ce5d6a52f50bf90b 432 PANTHER PTHR10229 9 432 2.0E-161 T 20-04-2016 IPR016496 GTPase HflX GO:0005525 AMC99_RS05765 4ad4465dadad56b2ce5d6a52f50bf90b 432 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 19 371 6.2E-134 T 20-04-2016 IPR016496 GTPase HflX GO:0005525 AMC99_RS05765 4ad4465dadad56b2ce5d6a52f50bf90b 432 Hamap MF_00900 GTPase HflX [hflX]. 30 402 45.091 T 20-04-2016 IPR016496 GTPase HflX GO:0005525 AMC99_RS05765 4ad4465dadad56b2ce5d6a52f50bf90b 432 SUPERFAMILY SSF52540 202 378 5.38E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08385 012b9f6395e10a17b6c8377cace1726e 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 121 2.0E-30 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS08385 012b9f6395e10a17b6c8377cace1726e 380 Gene3D G3DSA:1.20.140.10 222 380 1.3E-53 T 20-04-2016 AMC99_RS08385 012b9f6395e10a17b6c8377cace1726e 380 SUPERFAMILY SSF47203 230 379 3.38E-47 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS08385 012b9f6395e10a17b6c8377cace1726e 380 Gene3D G3DSA:2.40.110.10 125 221 5.9E-41 T 20-04-2016 AMC99_RS08385 012b9f6395e10a17b6c8377cace1726e 380 PANTHER PTHR10909 7 380 1.5E-176 T 20-04-2016 AMC99_RS08385 012b9f6395e10a17b6c8377cace1726e 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 127 139 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_RS08385 012b9f6395e10a17b6c8377cace1726e 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 380 5.9E-39 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS08385 012b9f6395e10a17b6c8377cace1726e 380 PANTHER PTHR10909:SF190 7 380 1.5E-176 T 20-04-2016 AMC99_RS08385 012b9f6395e10a17b6c8377cace1726e 380 SUPERFAMILY SSF56645 7 244 1.03E-82 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS08385 012b9f6395e10a17b6c8377cace1726e 380 Gene3D G3DSA:1.10.540.10 7 123 1.4E-32 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS08385 012b9f6395e10a17b6c8377cace1726e 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 220 4.3E-27 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS08385 012b9f6395e10a17b6c8377cace1726e 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_RS01850 7278839e497c6547e6d96ef393b86e9f 484 SUPERFAMILY SSF51905 1 304 2.91E-56 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01850 7278839e497c6547e6d96ef393b86e9f 484 SUPERFAMILY SSF51905 436 478 2.91E-56 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01850 7278839e497c6547e6d96ef393b86e9f 484 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 1 481 9.3E-196 T 20-04-2016 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 AMC99_RS01850 7278839e497c6547e6d96ef393b86e9f 484 PANTHER PTHR10668 1 478 2.0E-98 T 20-04-2016 AMC99_RS01850 7278839e497c6547e6d96ef393b86e9f 484 Pfam PF01593 Flavin containing amine oxidoreductase 2 474 2.0E-37 T 20-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMC99_RS01850 7278839e497c6547e6d96ef393b86e9f 484 Gene3D G3DSA:3.50.50.60 186 340 6.9E-23 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01850 7278839e497c6547e6d96ef393b86e9f 484 Gene3D G3DSA:3.50.50.60 2 81 6.9E-23 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01850 7278839e497c6547e6d96ef393b86e9f 484 ProSitePatterns PS00982 Bacterial-type phytoene dehydrogenase signature. 446 466 - T 20-04-2016 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site AMC99_RS01850 7278839e497c6547e6d96ef393b86e9f 484 PANTHER PTHR10668:SF4 1 478 2.0E-98 T 20-04-2016 AMC99_RS01060 40465e4ee7633871a70b342f753d4508 400 Gene3D G3DSA:3.30.497.10 281 339 6.0E-51 T 20-04-2016 AMC99_RS01060 40465e4ee7633871a70b342f753d4508 400 Gene3D G3DSA:3.30.497.10 44 183 6.0E-51 T 20-04-2016 AMC99_RS01060 40465e4ee7633871a70b342f753d4508 400 SMART SM00093 37 389 6.4E-48 T 20-04-2016 IPR023796 Serpin domain AMC99_RS01060 40465e4ee7633871a70b342f753d4508 400 Gene3D G3DSA:2.30.39.10 184 280 1.6E-19 T 20-04-2016 AMC99_RS01060 40465e4ee7633871a70b342f753d4508 400 Gene3D G3DSA:2.30.39.10 340 389 1.6E-19 T 20-04-2016 AMC99_RS01060 40465e4ee7633871a70b342f753d4508 400 Pfam PF00079 Serpin (serine protease inhibitor) 36 389 1.5E-69 T 20-04-2016 IPR023796 Serpin domain AMC99_RS01060 40465e4ee7633871a70b342f753d4508 400 ProSitePatterns PS00284 Serpins signature. 362 372 - T 20-04-2016 IPR023795 Serpin, conserved site AMC99_RS01060 40465e4ee7633871a70b342f753d4508 400 SUPERFAMILY SSF56574 34 389 3.01E-75 T 20-04-2016 IPR023796 Serpin domain AMC99_RS01060 40465e4ee7633871a70b342f753d4508 400 PANTHER PTHR11461 36 393 6.6E-76 T 20-04-2016 IPR000215 Serpin family GO:0005615 AMC99_RS10625 1799e143085c73caf4e4507b4d456b90 387 Gene3D G3DSA:1.10.540.10 7 127 1.8E-29 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS10625 1799e143085c73caf4e4507b4d456b90 387 PANTHER PTHR10909 10 387 4.3E-168 T 20-04-2016 AMC99_RS10625 1799e143085c73caf4e4507b4d456b90 387 SUPERFAMILY SSF47203 238 387 4.51E-48 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS10625 1799e143085c73caf4e4507b4d456b90 387 PANTHER PTHR10909:SF190 10 387 4.3E-168 T 20-04-2016 AMC99_RS10625 1799e143085c73caf4e4507b4d456b90 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 346 365 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_RS10625 1799e143085c73caf4e4507b4d456b90 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 387 5.2E-42 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS10625 1799e143085c73caf4e4507b4d456b90 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 126 1.8E-28 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS10625 1799e143085c73caf4e4507b4d456b90 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 226 1.9E-26 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS10625 1799e143085c73caf4e4507b4d456b90 387 SUPERFAMILY SSF56645 8 251 5.37E-75 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS10625 1799e143085c73caf4e4507b4d456b90 387 Gene3D G3DSA:2.40.110.10 129 226 1.2E-36 T 20-04-2016 AMC99_RS10625 1799e143085c73caf4e4507b4d456b90 387 Gene3D G3DSA:1.20.140.10 227 387 1.3E-55 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 192 775 1.4E-191 T 20-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 Gene3D G3DSA:2.70.150.10 201 365 4.1E-27 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 Gene3D G3DSA:3.40.50.1000 594 735 2.5E-60 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 Gene3D G3DSA:3.40.50.1000 438 481 2.5E-60 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 689 701 1.3E-27 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 591 602 1.3E-27 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 315 329 1.3E-27 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 467 481 1.3E-27 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 613 623 1.3E-27 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 666 685 1.3E-27 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 Pfam PF00122 E1-E2 ATPase 235 458 2.4E-64 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 SUPERFAMILY SSF81665 715 754 3.53E-18 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 SUPERFAMILY SSF81665 366 461 3.53E-18 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 SUPERFAMILY SSF81665 201 268 3.53E-18 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 PANTHER PTHR24093 116 776 1.7E-237 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 SUPERFAMILY SSF81653 269 365 9.42E-25 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 Pfam PF04945 YHS domain 18 63 6.7E-14 T 20-04-2016 IPR007029 YHS domain AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 469 475 - T 20-04-2016 IPR018303 P-type ATPase, phosphorylation site AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 Gene3D G3DSA:3.40.1110.10 482 593 4.1E-22 T 20-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 Pfam PF00702 haloacid dehalogenase-like hydrolase 463 680 3.7E-45 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 236 746 9.0E-89 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 SUPERFAMILY SSF47240 18 62 1.95E-6 T 20-04-2016 IPR009078 Ferritin-like superfamily AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 SUPERFAMILY SSF56784 465 485 1.65E-58 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 SUPERFAMILY SSF56784 524 773 1.65E-58 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 173 776 1.7E-180 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 PRINTS PR00943 Copper-transporting ATPase signature 388 402 1.3E-15 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 PRINTS PR00943 Copper-transporting ATPase signature 176 195 1.3E-15 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 PRINTS PR00943 Copper-transporting ATPase signature 234 253 1.3E-15 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 PRINTS PR00943 Copper-transporting ATPase signature 254 272 1.3E-15 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 PRINTS PR00943 Copper-transporting ATPase signature 450 465 1.3E-15 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 PRINTS PR00943 Copper-transporting ATPase signature 643 660 1.3E-15 T 20-04-2016 AMC99_RS00500 d949b27e3de2612ea8837c4a3cdba5c4 786 SMART SM00746 20 58 3.5E-7 T 20-04-2016 IPR011017 TRASH domain AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 6.9E-40 T 20-04-2016 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 491 6.9E-40 T 20-04-2016 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 6.9E-40 T 20-04-2016 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 6.9E-40 T 20-04-2016 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 6.9E-40 T 20-04-2016 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 Gene3D G3DSA:3.50.50.60 438 518 1.5E-16 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 214 505 4.5E-48 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PANTHER PTHR22912:SF107 199 515 7.3E-180 T 20-04-2016 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 Gene3D G3DSA:3.40.30.10 1 94 2.0E-29 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 Gene3D G3DSA:3.50.50.60 334 437 3.9E-31 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 SUPERFAMILY SSF52833 1 102 3.02E-25 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 518 1.8E-221 T 20-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 Gene3D G3DSA:3.50.50.60 213 333 8.0E-21 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 SUPERFAMILY SSF51905 205 515 2.59E-51 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 6.8E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 6.8E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 6.8E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 6.8E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 6.8E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 6.8E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 6.8E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 479 497 6.8E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 6.8E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PIRSF PIRSF000238 1 522 1.1E-235 T 20-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 Pfam PF13192 Thioredoxin domain 122 192 6.3E-11 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 SUPERFAMILY SSF52833 105 196 1.07E-17 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 PANTHER PTHR22912 199 515 7.3E-180 T 20-04-2016 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 20-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AMC99_RS01275 64ba773041b7c9cc545b5c16cebefd14 529 Gene3D G3DSA:3.40.30.10 104 196 4.2E-31 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS07985 ecd1fc51124a24d9d8d5f27f3c38ff57 321 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 321 70.128 T 20-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMC99_RS07985 ecd1fc51124a24d9d8d5f27f3c38ff57 321 PANTHER PTHR18919 27 321 2.4E-123 T 20-04-2016 AMC99_RS07985 ecd1fc51124a24d9d8d5f27f3c38ff57 321 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 320 7.2E-120 T 20-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMC99_RS07985 ecd1fc51124a24d9d8d5f27f3c38ff57 321 PANTHER PTHR18919:SF109 27 321 2.4E-123 T 20-04-2016 AMC99_RS07985 ecd1fc51124a24d9d8d5f27f3c38ff57 321 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 232 320 4.0E-35 T 20-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMC99_RS07985 ecd1fc51124a24d9d8d5f27f3c38ff57 321 Gene3D G3DSA:3.40.47.10 6 161 6.9E-64 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS07985 ecd1fc51124a24d9d8d5f27f3c38ff57 321 Gene3D G3DSA:3.40.47.10 162 320 1.3E-51 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS07985 ecd1fc51124a24d9d8d5f27f3c38ff57 321 SUPERFAMILY SSF53901 6 321 2.67E-70 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS07985 ecd1fc51124a24d9d8d5f27f3c38ff57 321 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 188 2.5E-33 T 20-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMC99_RS04445 212ddcc11444e2768da969f5448daefa 470 Gene3D G3DSA:3.40.50.300 4 213 1.5E-77 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04445 212ddcc11444e2768da969f5448daefa 470 Pfam PF00271 Helicase conserved C-terminal domain 249 346 2.4E-28 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS04445 212ddcc11444e2768da969f5448daefa 470 PANTHER PTHR24031:SF261 5 466 1.2E-173 T 20-04-2016 AMC99_RS04445 212ddcc11444e2768da969f5448daefa 470 SMART SM00487 22 224 1.8E-60 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_RS04445 212ddcc11444e2768da969f5448daefa 470 PANTHER PTHR24031 5 466 1.2E-173 T 20-04-2016 AMC99_RS04445 212ddcc11444e2768da969f5448daefa 470 SMART SM00490 265 346 1.9E-33 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS04445 212ddcc11444e2768da969f5448daefa 470 Pfam PF00270 DEAD/DEAH box helicase 27 198 1.7E-48 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_RS04445 212ddcc11444e2768da969f5448daefa 470 SUPERFAMILY SSF52540 76 366 1.89E-73 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04445 212ddcc11444e2768da969f5448daefa 470 Gene3D G3DSA:3.40.50.300 214 379 6.3E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06885 ad0ac3008468b29b8b7460e758e28a1f 750 PANTHER PTHR11731 37 67 1.4E-154 T 20-04-2016 AMC99_RS06885 ad0ac3008468b29b8b7460e758e28a1f 750 PANTHER PTHR11731 106 744 1.4E-154 T 20-04-2016 AMC99_RS06885 ad0ac3008468b29b8b7460e758e28a1f 750 SUPERFAMILY SSF82171 31 484 6.8E-47 T 20-04-2016 AMC99_RS06885 ad0ac3008468b29b8b7460e758e28a1f 750 PANTHER PTHR11731:SF110 37 67 1.4E-154 T 20-04-2016 AMC99_RS06885 ad0ac3008468b29b8b7460e758e28a1f 750 PANTHER PTHR11731:SF110 106 744 1.4E-154 T 20-04-2016 AMC99_RS06885 ad0ac3008468b29b8b7460e758e28a1f 750 SUPERFAMILY SSF53474 498 744 7.36E-66 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS06885 ad0ac3008468b29b8b7460e758e28a1f 750 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 146 461 1.6E-61 T 20-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AMC99_RS06885 ad0ac3008468b29b8b7460e758e28a1f 750 Gene3D G3DSA:2.140.10.30 31 482 1.4E-90 T 20-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AMC99_RS06885 ad0ac3008468b29b8b7460e758e28a1f 750 Pfam PF00326 Prolyl oligopeptidase family 551 744 1.1E-50 T 20-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMC99_RS06885 ad0ac3008468b29b8b7460e758e28a1f 750 Gene3D G3DSA:3.40.50.1820 497 744 4.1E-79 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 20-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 SUPERFAMILY SSF55424 344 469 9.62E-40 T 20-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 Gene3D G3DSA:3.50.50.60 174 335 1.7E-38 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PIRSF PIRSF000350 1 466 4.8E-89 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 460 1.7E-33 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PANTHER PTHR22912:SF151 5 463 1.2E-235 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 SUPERFAMILY SSF51905 3 367 2.31E-68 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 1.8E-42 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 1.8E-42 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 1.8E-42 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.8E-42 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 1.8E-42 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 470 1.1E-162 T 20-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 Gene3D G3DSA:3.30.390.30 336 469 2.0E-43 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.5E-74 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.5E-74 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 2.5E-74 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 2.5E-74 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.5E-74 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 2.5E-74 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.5E-74 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 2.5E-74 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 2.5E-74 T 20-04-2016 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 Gene3D G3DSA:3.50.50.60 4 166 1.1E-46 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 328 1.5E-78 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS07365 8dadd9fcb48bf352b0f51d62286c3363 470 PANTHER PTHR22912 5 463 1.2E-235 T 20-04-2016 AMC99_RS11610 a31e25cbccec4f8822dc4d223fc76915 389 Pfam PF04966 Carbohydrate-selective porin, OprB family 276 389 1.8E-10 T 20-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 AMC99_RS13215 335354348cf70d9e26f0ed112461857c 879 Pfam PF00593 TonB dependent receptor 531 861 2.8E-25 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS13215 335354348cf70d9e26f0ed112461857c 879 PANTHER PTHR30069:SF4 701 751 4.1E-59 T 20-04-2016 AMC99_RS13215 335354348cf70d9e26f0ed112461857c 879 Pfam PF07715 TonB-dependent Receptor Plug Domain 19 140 7.4E-20 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS13215 335354348cf70d9e26f0ed112461857c 879 PANTHER PTHR30069 288 669 4.1E-59 T 20-04-2016 AMC99_RS13215 335354348cf70d9e26f0ed112461857c 879 PANTHER PTHR30069:SF4 288 669 4.1E-59 T 20-04-2016 AMC99_RS13215 335354348cf70d9e26f0ed112461857c 879 Gene3D G3DSA:2.40.170.20 344 647 2.1E-86 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS13215 335354348cf70d9e26f0ed112461857c 879 Gene3D G3DSA:2.40.170.20 144 279 2.1E-86 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS13215 335354348cf70d9e26f0ed112461857c 879 Gene3D G3DSA:2.40.170.20 692 879 2.1E-86 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS13215 335354348cf70d9e26f0ed112461857c 879 PANTHER PTHR30069:SF4 6 259 4.1E-59 T 20-04-2016 AMC99_RS13215 335354348cf70d9e26f0ed112461857c 879 Gene3D G3DSA:2.170.130.10 18 143 3.4E-28 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS13215 335354348cf70d9e26f0ed112461857c 879 PANTHER PTHR30069 701 751 4.1E-59 T 20-04-2016 AMC99_RS13215 335354348cf70d9e26f0ed112461857c 879 PANTHER PTHR30069 6 259 4.1E-59 T 20-04-2016 AMC99_RS13215 335354348cf70d9e26f0ed112461857c 879 SUPERFAMILY SSF56935 697 877 1.75E-101 T 20-04-2016 AMC99_RS13215 335354348cf70d9e26f0ed112461857c 879 SUPERFAMILY SSF56935 6 277 1.75E-101 T 20-04-2016 AMC99_RS13215 335354348cf70d9e26f0ed112461857c 879 SUPERFAMILY SSF56935 349 645 1.75E-101 T 20-04-2016 AMC99_RS06110 de8f8b5718fdbb26c4239760f7d05bdf 430 SUPERFAMILY SSF142019 3 241 1.14E-85 T 20-04-2016 AMC99_RS06110 de8f8b5718fdbb26c4239760f7d05bdf 430 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 345 356 - T 20-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 AMC99_RS06110 de8f8b5718fdbb26c4239760f7d05bdf 430 Pfam PF10531 SLBB domain 244 293 3.2E-8 T 20-04-2016 IPR019554 Soluble ligand binding domain AMC99_RS06110 de8f8b5718fdbb26c4239760f7d05bdf 430 SMART SM00928 332 377 5.2E-25 T 20-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AMC99_RS06110 de8f8b5718fdbb26c4239760f7d05bdf 430 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 335 416 4.1E-29 T 20-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AMC99_RS06110 de8f8b5718fdbb26c4239760f7d05bdf 430 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 418 6.9E-197 T 20-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 AMC99_RS06110 de8f8b5718fdbb26c4239760f7d05bdf 430 SUPERFAMILY SSF140490 328 422 8.37E-36 T 20-04-2016 AMC99_RS06110 de8f8b5718fdbb26c4239760f7d05bdf 430 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 168 183 - T 20-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 AMC99_RS06110 de8f8b5718fdbb26c4239760f7d05bdf 430 SUPERFAMILY SSF142984 242 327 2.09E-23 T 20-04-2016 AMC99_RS06110 de8f8b5718fdbb26c4239760f7d05bdf 430 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 220 2.8E-49 T 20-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain AMC99_RS06110 de8f8b5718fdbb26c4239760f7d05bdf 430 PANTHER PTHR11780 2 430 1.4E-271 T 20-04-2016 AMC99_RS08535 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 SMART SM01002 147 313 2.9E-79 T 20-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMC99_RS08535 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 PANTHER PTHR10160 1 372 8.5E-139 T 20-04-2016 AMC99_RS08535 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 Gene3D G3DSA:3.40.50.1770 2 169 2.5E-52 T 20-04-2016 AMC99_RS08535 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 Gene3D G3DSA:3.40.50.720 170 202 2.2E-7 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08535 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 142 368 1.8E-65 T 20-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMC99_RS08535 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 138 1.7E-38 T 20-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMC99_RS08535 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 Gene3D G3DSA:3.40.50.1770 203 349 5.0E-34 T 20-04-2016 AMC99_RS08535 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 SMART SM01003 4 138 3.9E-56 T 20-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMC99_RS08535 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 SUPERFAMILY SSF51735 138 319 6.84E-38 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08535 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 SUPERFAMILY SSF52283 2 169 1.02E-47 T 20-04-2016 AMC99_RS08535 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 171 196 - T 20-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 AMC99_RS13680 5441e75c09cff062d8c2e9c72beab39d 76 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 12 72 1.4E-20 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS13680 5441e75c09cff062d8c2e9c72beab39d 76 SUPERFAMILY SSF47413 8 74 4.74E-16 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS13680 5441e75c09cff062d8c2e9c72beab39d 76 Gene3D G3DSA:1.10.260.40 7 74 1.9E-16 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS13680 5441e75c09cff062d8c2e9c72beab39d 76 SMART SM00530 12 68 1.9E-5 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS13680 5441e75c09cff062d8c2e9c72beab39d 76 PANTHER PTHR37301 9 73 1.5E-26 T 20-04-2016 AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 1.9E-36 T 20-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 418 41.758 T 20-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 SUPERFAMILY SSF56059 102 316 9.72E-61 T 20-04-2016 AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 416 2.1E-27 T 20-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 Gene3D G3DSA:3.30.1490.20 120 187 1.9E-25 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 SUPERFAMILY SSF52440 1 101 3.45E-36 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 SMART SM01210 326 418 4.3E-48 T 20-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 Gene3D G3DSA:3.30.470.20 189 320 8.1E-61 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 Gene3D G3DSA:3.40.50.20 2 93 8.3E-38 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 Gene3D G3DSA:3.90.600.10 327 417 1.3E-31 T 20-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 418 8.4E-163 T 20-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 SMART SM01209 101 292 8.2E-132 T 20-04-2016 AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 SUPERFAMILY SSF51246 325 418 6.8E-29 T 20-04-2016 IPR011054 Rudiment single hybrid motif AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 286 293 - T 20-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 292 1.1E-76 T 20-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS12105 ab71fdf488dd7293e18c3abda3472611 427 PANTHER PTHR10520 1 421 2.5E-251 T 20-04-2016 AMC99_RS02605 e18f40fb6382c8c24f93d766576e77bf 153 Pfam PF01029 NusB family 15 149 2.8E-35 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMC99_RS02605 e18f40fb6382c8c24f93d766576e77bf 153 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 13 150 9.4E-39 T 20-04-2016 IPR011605 NusB antitermination factor GO:0006353 AMC99_RS02605 e18f40fb6382c8c24f93d766576e77bf 153 PANTHER PTHR11078 1 152 1.6E-34 T 20-04-2016 IPR011605 NusB antitermination factor GO:0006353 AMC99_RS02605 e18f40fb6382c8c24f93d766576e77bf 153 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 11 152 20.947 T 20-04-2016 IPR011605 NusB antitermination factor GO:0006353 AMC99_RS02605 e18f40fb6382c8c24f93d766576e77bf 153 SUPERFAMILY SSF48013 11 152 1.18E-35 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMC99_RS02605 e18f40fb6382c8c24f93d766576e77bf 153 Gene3D G3DSA:1.10.940.10 11 152 3.0E-39 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMC99_RS05800 07413b99e35c12f9dc49126476fbafe1 382 PANTHER PTHR32125 238 377 4.7E-54 T 20-04-2016 AMC99_RS05800 07413b99e35c12f9dc49126476fbafe1 382 PANTHER PTHR32125 7 76 4.7E-54 T 20-04-2016 AMC99_RS05800 07413b99e35c12f9dc49126476fbafe1 382 SUPERFAMILY SSF69765 226 380 1.83E-65 T 20-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS05800 07413b99e35c12f9dc49126476fbafe1 382 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 260 275 - T 20-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS05800 07413b99e35c12f9dc49126476fbafe1 382 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 8 382 42.228 T 20-04-2016 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056|UniPathway: UPA00056 AMC99_RS05800 07413b99e35c12f9dc49126476fbafe1 382 Gene3D G3DSA:3.30.1330.50 225 380 4.8E-71 T 20-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS05800 07413b99e35c12f9dc49126476fbafe1 382 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 9 241 23.163 T 20-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS05800 07413b99e35c12f9dc49126476fbafe1 382 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 20-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS05800 07413b99e35c12f9dc49126476fbafe1 382 SUPERFAMILY SSF53448 10 220 1.6E-44 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS05800 07413b99e35c12f9dc49126476fbafe1 382 Pfam PF02542 YgbB family 226 379 1.0E-63 T 20-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS05800 07413b99e35c12f9dc49126476fbafe1 382 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 220 3.6E-51 T 20-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS05800 07413b99e35c12f9dc49126476fbafe1 382 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 226 381 34.797 T 20-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS05800 07413b99e35c12f9dc49126476fbafe1 382 Gene3D G3DSA:3.90.550.10 9 220 4.6E-54 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS05800 07413b99e35c12f9dc49126476fbafe1 382 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 220 6.2E-57 T 20-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS05800 07413b99e35c12f9dc49126476fbafe1 382 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 227 379 5.4E-65 T 20-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS08660 2d88438caeeba31d52548230bf077085 534 Gene3D G3DSA:3.40.449.10 19 213 3.1E-79 T 20-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 AMC99_RS08660 2d88438caeeba31d52548230bf077085 534 PANTHER PTHR30031:SF0 19 531 2.1E-301 T 20-04-2016 AMC99_RS08660 2d88438caeeba31d52548230bf077085 534 PANTHER PTHR30031 19 531 2.1E-301 T 20-04-2016 AMC99_RS08660 2d88438caeeba31d52548230bf077085 534 SUPERFAMILY SSF68923 7 213 1.31E-78 T 20-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 AMC99_RS08660 2d88438caeeba31d52548230bf077085 534 Gene3D G3DSA:3.90.228.20 338 528 1.6E-121 T 20-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 AMC99_RS08660 2d88438caeeba31d52548230bf077085 534 Gene3D G3DSA:3.90.228.20 214 276 1.6E-121 T 20-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 AMC99_RS08660 2d88438caeeba31d52548230bf077085 534 Pfam PF01293 Phosphoenolpyruvate carboxykinase 19 482 3.5E-217 T 20-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 AMC99_RS08660 2d88438caeeba31d52548230bf077085 534 SUPERFAMILY SSF53795 214 528 1.98E-134 T 20-04-2016 AMC99_RS08660 2d88438caeeba31d52548230bf077085 534 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 9 528 1.7E-212 T 20-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 AMC99_RS08660 2d88438caeeba31d52548230bf077085 534 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 13 530 54.587 T 20-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 AMC99_RS08660 2d88438caeeba31d52548230bf077085 534 PIRSF PIRSF006294 3 530 8.3E-232 T 20-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 AMC99_RS06990 699fcfb88e2e696f7399a099c4a2495e 108 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 53 98 1.5E-12 T 20-04-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter AMC99_RS06990 699fcfb88e2e696f7399a099c4a2495e 108 PIRSF PIRSF032126 1 104 4.4E-23 T 20-04-2016 IPR016989 ATP synthase protein I, alphaproteobacterial AMC99_RS04090 71d36f663946fd2b01a1aa2008354741 231 SMART SM00382 36 230 3.3E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS04090 71d36f663946fd2b01a1aa2008354741 231 Pfam PF00005 ABC transporter 27 174 4.2E-30 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS04090 71d36f663946fd2b01a1aa2008354741 231 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_RS04090 71d36f663946fd2b01a1aa2008354741 231 PANTHER PTHR24220:SF86 9 227 7.0E-88 T 20-04-2016 AMC99_RS04090 71d36f663946fd2b01a1aa2008354741 231 SUPERFAMILY SSF52540 8 227 3.99E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04090 71d36f663946fd2b01a1aa2008354741 231 Gene3D G3DSA:3.40.50.300 7 226 6.1E-65 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04090 71d36f663946fd2b01a1aa2008354741 231 PANTHER PTHR24220 9 227 7.0E-88 T 20-04-2016 AMC99_RS09205 8bc5c475a68c2104f0abb3c089e3eac3 197 PANTHER PTHR24220:SF508 10 185 5.8E-54 T 20-04-2016 AMC99_RS09205 8bc5c475a68c2104f0abb3c089e3eac3 197 Gene3D G3DSA:3.40.50.300 13 182 9.0E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09205 8bc5c475a68c2104f0abb3c089e3eac3 197 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 9 192 3.0E-50 T 20-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 AMC99_RS09205 8bc5c475a68c2104f0abb3c089e3eac3 197 SMART SM00382 33 196 7.4E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS09205 8bc5c475a68c2104f0abb3c089e3eac3 197 Pfam PF00005 ABC transporter 25 150 3.0E-19 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS09205 8bc5c475a68c2104f0abb3c089e3eac3 197 SUPERFAMILY SSF52540 7 184 2.51E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09205 8bc5c475a68c2104f0abb3c089e3eac3 197 PANTHER PTHR24220 10 185 5.8E-54 T 20-04-2016 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 PRINTS PR00702 Acriflavin resistance protein family signature 669 683 8.7E-23 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 PRINTS PR00702 Acriflavin resistance protein family signature 526 549 8.7E-23 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 PRINTS PR00702 Acriflavin resistance protein family signature 35 59 8.7E-23 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 PRINTS PR00702 Acriflavin resistance protein family signature 63 81 8.7E-23 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 PRINTS PR00702 Acriflavin resistance protein family signature 599 616 8.7E-23 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 PRINTS PR00702 Acriflavin resistance protein family signature 412 433 8.7E-23 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 PRINTS PR00702 Acriflavin resistance protein family signature 385 408 8.7E-23 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 PANTHER PTHR32063 209 1108 0.0 T 20-04-2016 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 PANTHER PTHR32063 25 179 0.0 T 20-04-2016 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 Gene3D G3DSA:1.10.3850.10 863 1079 2.5E-52 T 20-04-2016 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 Gene3D G3DSA:1.10.3850.10 329 555 2.6E-45 T 20-04-2016 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 SUPERFAMILY SSF82866 855 1078 5.89E-50 T 20-04-2016 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 Gene3D G3DSA:3.30.70.1430 65 166 1.1E-27 T 20-04-2016 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 SUPERFAMILY SSF82866 345 553 7.19E-32 T 20-04-2016 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 Gene3D G3DSA:3.30.2090.10 238 320 4.5E-13 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 Gene3D G3DSA:3.30.2090.10 771 855 5.0E-15 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 SUPERFAMILY SSF82714 771 855 3.14E-16 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 SUPERFAMILY SSF82714 238 320 6.93E-14 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 PANTHER PTHR32063:SF24 209 1108 0.0 T 20-04-2016 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 PANTHER PTHR32063:SF24 25 179 0.0 T 20-04-2016 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 25 1080 0.0 T 20-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 Pfam PF00873 AcrB/AcrD/AcrF family 29 1074 4.8E-284 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 SUPERFAMILY SSF82693 625 708 1.36E-8 T 20-04-2016 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 Gene3D G3DSA:3.30.70.1430 625 704 1.8E-6 T 20-04-2016 AMC99_RS00420 8a1e7fa622c17e457348ae51a4fb0fff 1111 SUPERFAMILY SSF82693 65 151 7.59E-22 T 20-04-2016 AMC99_RS07565 7423b673f7cd24a9664f2fcad0298755 156 SUPERFAMILY SSF47973 1 149 9.94E-62 T 20-04-2016 IPR023798 Ribosomal protein S7 domain AMC99_RS07565 7423b673f7cd24a9664f2fcad0298755 156 PIRSF PIRSF002122 3 156 9.8E-61 T 20-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 AMC99_RS07565 7423b673f7cd24a9664f2fcad0298755 156 Gene3D G3DSA:1.10.455.10 8 156 5.0E-67 T 20-04-2016 IPR023798 Ribosomal protein S7 domain AMC99_RS07565 7423b673f7cd24a9664f2fcad0298755 156 PANTHER PTHR11205 1 156 1.2E-90 T 20-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 AMC99_RS07565 7423b673f7cd24a9664f2fcad0298755 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.272 T 20-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMC99_RS07565 7423b673f7cd24a9664f2fcad0298755 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 6.7E-68 T 20-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMC99_RS07565 7423b673f7cd24a9664f2fcad0298755 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 20-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 AMC99_RS07565 7423b673f7cd24a9664f2fcad0298755 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.0E-67 T 20-04-2016 IPR023798 Ribosomal protein S7 domain AMC99_RS04990 d15ed9a0d5bd608612db08cba2c8d6b4 399 SUPERFAMILY SSF55874 224 391 3.01E-43 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS04990 d15ed9a0d5bd608612db08cba2c8d6b4 399 Gene3D G3DSA:1.10.287.130 161 220 3.8E-19 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS04990 d15ed9a0d5bd608612db08cba2c8d6b4 399 SMART SM00388 167 235 3.2E-22 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS04990 d15ed9a0d5bd608612db08cba2c8d6b4 399 PANTHER PTHR24423:SF554 165 398 6.9E-80 T 20-04-2016 AMC99_RS04990 d15ed9a0d5bd608612db08cba2c8d6b4 399 PANTHER PTHR24423 165 398 6.9E-80 T 20-04-2016 AMC99_RS04990 d15ed9a0d5bd608612db08cba2c8d6b4 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 330 6.0E-16 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS04990 d15ed9a0d5bd608612db08cba2c8d6b4 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 388 6.0E-16 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS04990 d15ed9a0d5bd608612db08cba2c8d6b4 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 369 6.0E-16 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS04990 d15ed9a0d5bd608612db08cba2c8d6b4 399 SMART SM00387 278 391 6.9E-41 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS04990 d15ed9a0d5bd608612db08cba2c8d6b4 399 Gene3D G3DSA:3.30.565.10 221 393 1.3E-49 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS04990 d15ed9a0d5bd608612db08cba2c8d6b4 399 Pfam PF00512 His Kinase A (phospho-acceptor) domain 169 234 2.5E-19 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS04990 d15ed9a0d5bd608612db08cba2c8d6b4 399 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 390 5.9E-27 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS04990 d15ed9a0d5bd608612db08cba2c8d6b4 399 SUPERFAMILY SSF47384 160 236 2.75E-20 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS00230 6196def58a10a4f4680e2315306bc929 132 SUPERFAMILY SSF50249 1 125 1.13E-33 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS00230 6196def58a10a4f4680e2315306bc929 132 Gene3D G3DSA:2.40.50.140 1 118 6.4E-37 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS00230 6196def58a10a4f4680e2315306bc929 132 PANTHER PTHR10302 1 130 4.4E-29 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AMC99_RS00230 6196def58a10a4f4680e2315306bc929 132 Hamap MF_00984 Single-stranded DNA-binding protein. 2 117 25.51 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AMC99_RS00230 6196def58a10a4f4680e2315306bc929 132 PIRSF PIRSF002070 1 130 6.0E-34 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AMC99_RS00230 6196def58a10a4f4680e2315306bc929 132 Pfam PF00436 Single-strand binding protein family 3 113 6.6E-29 T 20-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 AMC99_RS00230 6196def58a10a4f4680e2315306bc929 132 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 120 1.8E-27 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AMC99_RS01925 2bc9a632ad5f8471445634b202e2e2c2 632 Pfam PF01964 Radical SAM ThiC family 129 577 5.3E-199 T 20-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 AMC99_RS01925 2bc9a632ad5f8471445634b202e2e2c2 632 PANTHER PTHR30557:SF1 121 151 0.0 T 20-04-2016 AMC99_RS01925 2bc9a632ad5f8471445634b202e2e2c2 632 PANTHER PTHR30557:SF1 609 626 0.0 T 20-04-2016 AMC99_RS01925 2bc9a632ad5f8471445634b202e2e2c2 632 PANTHER PTHR30557:SF1 16 84 0.0 T 20-04-2016 AMC99_RS01925 2bc9a632ad5f8471445634b202e2e2c2 632 PANTHER PTHR30557:SF1 179 592 0.0 T 20-04-2016 AMC99_RS01925 2bc9a632ad5f8471445634b202e2e2c2 632 Pfam PF13667 ThiC-associated domain 17 86 3.9E-22 T 20-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 AMC99_RS01925 2bc9a632ad5f8471445634b202e2e2c2 632 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 128 580 2.0E-213 T 20-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 AMC99_RS01925 2bc9a632ad5f8471445634b202e2e2c2 632 PANTHER PTHR30557 121 151 0.0 T 20-04-2016 AMC99_RS01925 2bc9a632ad5f8471445634b202e2e2c2 632 PANTHER PTHR30557 609 626 0.0 T 20-04-2016 AMC99_RS01925 2bc9a632ad5f8471445634b202e2e2c2 632 PANTHER PTHR30557 16 84 0.0 T 20-04-2016 AMC99_RS01925 2bc9a632ad5f8471445634b202e2e2c2 632 PANTHER PTHR30557 179 592 0.0 T 20-04-2016 AMC99_RS01925 2bc9a632ad5f8471445634b202e2e2c2 632 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 128 582 56.169 T 20-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 PANTHER PTHR11638 4 140 0.0 T 20-04-2016 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 PANTHER PTHR11638 159 772 0.0 T 20-04-2016 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 PANTHER PTHR11638:SF111 4 140 0.0 T 20-04-2016 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 PANTHER PTHR11638:SF111 159 772 0.0 T 20-04-2016 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 19 64 4.0E-11 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 SUPERFAMILY SSF81923 4 143 2.88E-55 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 Gene3D G3DSA:1.10.8.60 362 444 2.3E-28 T 20-04-2016 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 Gene3D G3DSA:1.10.1780.10 4 144 1.6E-39 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 Pfam PF07724 AAA domain (Cdc48 subfamily) 496 657 2.1E-48 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 221 353 1.1E-12 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 SMART SM00382 497 633 1.3E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 SMART SM00382 216 362 2.4E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 6 744 0.0 T 20-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 SUPERFAMILY SSF52540 178 426 1.64E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 Gene3D G3DSA:3.40.50.300 179 360 5.9E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 Gene3D G3DSA:3.40.50.300 452 674 8.7E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 SUPERFAMILY SSF52540 447 740 1.74E-76 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 543 561 8.6E-38 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 572 590 8.6E-38 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 619 8.6E-38 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 501 519 8.6E-38 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 312 324 - T 20-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 528 546 - T 20-04-2016 IPR028299 ClpA/B, conserved site 2 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 SMART SM01086 663 752 3.2E-35 T 20-04-2016 IPR019489 Clp ATPase, C-terminal AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 Gene3D G3DSA:1.10.8.60 675 760 5.7E-30 T 20-04-2016 AMC99_RS12580 bbf5a55d15ad43058e9a460891203d22 800 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 663 743 3.6E-24 T 20-04-2016 IPR019489 Clp ATPase, C-terminal AMC99_RS11415 45b68e90a9d0bb36b4541dcd1f4e09a3 251 Gene3D G3DSA:3.40.50.2300 6 129 2.3E-39 T 20-04-2016 AMC99_RS11415 45b68e90a9d0bb36b4541dcd1f4e09a3 251 PANTHER PTHR26402:SF528 7 243 3.3E-81 T 20-04-2016 AMC99_RS11415 45b68e90a9d0bb36b4541dcd1f4e09a3 251 SMART SM00862 162 238 7.2E-18 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS11415 45b68e90a9d0bb36b4541dcd1f4e09a3 251 SMART SM00448 7 117 2.5E-40 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS11415 45b68e90a9d0bb36b4541dcd1f4e09a3 251 SUPERFAMILY SSF52172 4 129 5.83E-40 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS11415 45b68e90a9d0bb36b4541dcd1f4e09a3 251 SUPERFAMILY SSF46894 143 240 1.45E-22 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_RS11415 45b68e90a9d0bb36b4541dcd1f4e09a3 251 Pfam PF00072 Response regulator receiver domain 9 118 2.0E-27 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS11415 45b68e90a9d0bb36b4541dcd1f4e09a3 251 PANTHER PTHR26402 7 243 3.3E-81 T 20-04-2016 AMC99_RS11415 45b68e90a9d0bb36b4541dcd1f4e09a3 251 Gene3D G3DSA:1.10.10.10 142 241 1.9E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS11415 45b68e90a9d0bb36b4541dcd1f4e09a3 251 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 238 2.9E-19 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS08790 d5f8298d493e05c2326b0a159b6e9ea9 192 SUPERFAMILY SSF141523 57 190 2.49E-22 T 20-04-2016 AMC99_RS08790 d5f8298d493e05c2326b0a159b6e9ea9 192 PANTHER PTHR36699 43 191 5.2E-45 T 20-04-2016 AMC99_RS08790 d5f8298d493e05c2326b0a159b6e9ea9 192 Pfam PF03734 L,D-transpeptidase catalytic domain 56 190 7.3E-20 T 20-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMC99_RS08790 d5f8298d493e05c2326b0a159b6e9ea9 192 Gene3D G3DSA:2.40.440.10 56 191 1.8E-17 T 20-04-2016 AMC99_RS03355 85dfc2e93bc6c16847b008ffdda6bcc1 227 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 9 225 1.4E-77 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMC99_RS03355 85dfc2e93bc6c16847b008ffdda6bcc1 227 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 7 226 36.914 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMC99_RS03355 85dfc2e93bc6c16847b008ffdda6bcc1 227 SUPERFAMILY SSF64005 8 221 1.14E-74 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMC99_RS03355 85dfc2e93bc6c16847b008ffdda6bcc1 227 Gene3D G3DSA:3.40.1180.10 9 226 4.7E-83 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMC99_RS03355 85dfc2e93bc6c16847b008ffdda6bcc1 227 Pfam PF01255 Putative undecaprenyl diphosphate synthase 14 225 1.3E-75 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMC99_RS03355 85dfc2e93bc6c16847b008ffdda6bcc1 227 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 171 188 - T 20-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 AMC99_RS03355 85dfc2e93bc6c16847b008ffdda6bcc1 227 PANTHER PTHR10291 9 227 1.6E-102 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMC99_RS04730 61881977c71504ff0688c0f90146796f 435 SUPERFAMILY SSF52518 59 418 1.23E-95 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS04730 61881977c71504ff0688c0f90146796f 435 Gene3D G3DSA:3.40.50.970 18 418 7.2E-132 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS04730 61881977c71504ff0688c0f90146796f 435 PANTHER PTHR11516 14 418 1.1E-193 T 20-04-2016 AMC99_RS04730 61881977c71504ff0688c0f90146796f 435 Pfam PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal 16 56 4.6E-21 T 20-04-2016 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain KEGG: 00280+1.2.4.4|KEGG: 00640+1.2.4.4|MetaCyc: PWY-5046 AMC99_RS04730 61881977c71504ff0688c0f90146796f 435 PANTHER PTHR11516:SF31 14 418 1.1E-193 T 20-04-2016 AMC99_RS04730 61881977c71504ff0688c0f90146796f 435 Pfam PF00676 Dehydrogenase E1 component 95 388 3.2E-93 T 20-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 AMC99_RS06175 aac852ebcff2f33290b76709012a2277 433 ProSitePatterns PS01219 Ammonium transporters signature. 186 211 - T 20-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AMC99_RS06175 aac852ebcff2f33290b76709012a2277 433 PANTHER PTHR11730:SF17 8 433 2.1E-155 T 20-04-2016 AMC99_RS06175 aac852ebcff2f33290b76709012a2277 433 TIGRFAM TIGR00836 amt: ammonium transporter 33 428 6.9E-118 T 20-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AMC99_RS06175 aac852ebcff2f33290b76709012a2277 433 Pfam PF00909 Ammonium Transporter Family 35 428 3.9E-105 T 20-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AMC99_RS06175 aac852ebcff2f33290b76709012a2277 433 SUPERFAMILY SSF111352 30 411 9.81E-116 T 20-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AMC99_RS06175 aac852ebcff2f33290b76709012a2277 433 PANTHER PTHR11730 8 433 2.1E-155 T 20-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AMC99_RS06175 aac852ebcff2f33290b76709012a2277 433 Gene3D G3DSA:1.10.3430.10 29 411 8.8E-120 T 20-04-2016 IPR029020 Ammonium/urea transporter AMC99_RS11255 f24804b69bb87bbc7e8db564922fe740 252 Pfam PF02585 GlcNAc-PI de-N-acetylase 17 149 3.5E-25 T 20-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related AMC99_RS11255 f24804b69bb87bbc7e8db564922fe740 252 Gene3D G3DSA:3.40.50.10320 13 216 7.9E-45 T 20-04-2016 IPR024078 Putative deacetylase LmbE-like domain AMC99_RS11255 f24804b69bb87bbc7e8db564922fe740 252 PANTHER PTHR12993 7 213 9.8E-21 T 20-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related AMC99_RS11255 f24804b69bb87bbc7e8db564922fe740 252 SUPERFAMILY SSF102588 14 216 1.7E-38 T 20-04-2016 IPR024078 Putative deacetylase LmbE-like domain AMC99_RS13430 a54c62e80fb148623d72acd446836b60 202 PANTHER PTHR33877 24 202 1.2E-68 T 20-04-2016 AMC99_RS13430 a54c62e80fb148623d72acd446836b60 202 PANTHER PTHR33877:SF2 24 202 1.2E-68 T 20-04-2016 AMC99_RS13430 a54c62e80fb148623d72acd446836b60 202 SMART SM00507 98 148 5.6E-11 T 20-04-2016 IPR003615 HNH nuclease AMC99_RS13430 a54c62e80fb148623d72acd446836b60 202 Pfam PF14279 HNH endonuclease 111 162 2.0E-15 T 20-04-2016 IPR029471 HNH endonuclease 5 AMC99_RS02495 ff8b2e7c836f04757c5cc735486d8a6c 211 SUPERFAMILY SSF52172 4 156 1.37E-24 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS02495 ff8b2e7c836f04757c5cc735486d8a6c 211 PANTHER PTHR26402 3 197 1.3E-61 T 20-04-2016 AMC99_RS02495 ff8b2e7c836f04757c5cc735486d8a6c 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 197 2.9E-19 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS02495 ff8b2e7c836f04757c5cc735486d8a6c 211 PANTHER PTHR26402:SF474 3 197 1.3E-61 T 20-04-2016 AMC99_RS02495 ff8b2e7c836f04757c5cc735486d8a6c 211 Gene3D G3DSA:3.40.50.2300 4 141 7.7E-28 T 20-04-2016 AMC99_RS02495 ff8b2e7c836f04757c5cc735486d8a6c 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS02495 ff8b2e7c836f04757c5cc735486d8a6c 211 Pfam PF00072 Response regulator receiver domain 5 116 4.2E-21 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS02495 ff8b2e7c836f04757c5cc735486d8a6c 211 SMART SM00421 140 197 8.0E-24 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS02495 ff8b2e7c836f04757c5cc735486d8a6c 211 Gene3D G3DSA:1.10.10.10 142 200 6.1E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS02495 ff8b2e7c836f04757c5cc735486d8a6c 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 3.0E-10 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS02495 ff8b2e7c836f04757c5cc735486d8a6c 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 3.0E-10 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS02495 ff8b2e7c836f04757c5cc735486d8a6c 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 3.0E-10 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS02495 ff8b2e7c836f04757c5cc735486d8a6c 211 SUPERFAMILY SSF46894 138 199 1.4E-17 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_RS02495 ff8b2e7c836f04757c5cc735486d8a6c 211 SMART SM00448 3 116 3.3E-17 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS13280 94a724bd0634636733797db8cecc2370 232 PIRSF PIRSF006293 10 232 9.6E-75 T 20-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AMC99_RS13280 94a724bd0634636733797db8cecc2370 232 SUPERFAMILY SSF52402 11 231 2.87E-60 T 20-04-2016 AMC99_RS13280 94a724bd0634636733797db8cecc2370 232 Pfam PF06508 Queuosine biosynthesis protein QueC 13 223 1.6E-73 T 20-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AMC99_RS13280 94a724bd0634636733797db8cecc2370 232 PANTHER PTHR11587:SF3 6 232 1.3E-97 T 20-04-2016 AMC99_RS13280 94a724bd0634636733797db8cecc2370 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 12 229 53.747 T 20-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AMC99_RS13280 94a724bd0634636733797db8cecc2370 232 Gene3D G3DSA:3.40.50.620 11 232 9.8E-77 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS13280 94a724bd0634636733797db8cecc2370 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 14 216 2.7E-59 T 20-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AMC99_RS13280 94a724bd0634636733797db8cecc2370 232 PANTHER PTHR11587 6 232 1.3E-97 T 20-04-2016 AMC99_RS05980 854e60785fbb111a647fc410aee1c150 261 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 54 72 - T 20-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 AMC99_RS05980 854e60785fbb111a647fc410aee1c150 261 Pfam PF00218 Indole-3-glycerol phosphate synthase 4 258 2.5E-94 T 20-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 AMC99_RS05980 854e60785fbb111a647fc410aee1c150 261 PANTHER PTHR22854 1 259 1.5E-106 T 20-04-2016 AMC99_RS05980 854e60785fbb111a647fc410aee1c150 261 SUPERFAMILY SSF51366 10 260 6.47E-86 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMC99_RS05980 854e60785fbb111a647fc410aee1c150 261 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 2 260 36.561 T 20-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 AMC99_RS05980 854e60785fbb111a647fc410aee1c150 261 Gene3D G3DSA:3.20.20.70 2 259 1.4E-101 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS05980 854e60785fbb111a647fc410aee1c150 261 PANTHER PTHR22854:SF2 1 259 1.5E-106 T 20-04-2016 AMC99_RS03805 09b097c7abe284a5246a9aead5743001 353 PANTHER PTHR12561:SF11 5 326 2.0E-74 T 20-04-2016 AMC99_RS03805 09b097c7abe284a5246a9aead5743001 353 Gene3D G3DSA:3.90.1550.10 4 250 9.2E-52 T 20-04-2016 AMC99_RS03805 09b097c7abe284a5246a9aead5743001 353 SUPERFAMILY SSF55681 5 250 2.13E-58 T 20-04-2016 AMC99_RS03805 09b097c7abe284a5246a9aead5743001 353 PANTHER PTHR12561 5 326 2.0E-74 T 20-04-2016 AMC99_RS03785 99abd528bfc560bfd625dc7a7a7d6c21 461 Pfam PF02754 Cysteine-rich domain 256 354 7.1E-6 T 20-04-2016 IPR004017 Cysteine-rich domain AMC99_RS03785 99abd528bfc560bfd625dc7a7a7d6c21 461 PANTHER PTHR32479:SF12 23 446 4.7E-75 T 20-04-2016 AMC99_RS03785 99abd528bfc560bfd625dc7a7a7d6c21 461 PANTHER PTHR32479 23 446 4.7E-75 T 20-04-2016 AMC99_RS05440 cc5348351a4b9f5c943cb2fbec427adb 248 SUPERFAMILY SSF53474 21 247 1.45E-30 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS05440 cc5348351a4b9f5c943cb2fbec427adb 248 Pfam PF01738 Dienelactone hydrolase family 34 245 1.2E-34 T 20-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 AMC99_RS05440 cc5348351a4b9f5c943cb2fbec427adb 248 Gene3D G3DSA:3.40.50.1820 18 245 6.8E-38 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS05440 cc5348351a4b9f5c943cb2fbec427adb 248 PANTHER PTHR22946 18 248 2.7E-39 T 20-04-2016 AMC99_RS06895 e814a51c6b05d40ecb311095935856be 246 PANTHER PTHR32125 7 230 2.6E-86 T 20-04-2016 AMC99_RS06895 e814a51c6b05d40ecb311095935856be 246 PIRSF PIRSF000386 3 245 1.6E-83 T 20-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMC99_RS06895 e814a51c6b05d40ecb311095935856be 246 Gene3D G3DSA:1.10.1270.20 165 230 1.6E-29 T 20-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMC99_RS06895 e814a51c6b05d40ecb311095935856be 246 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 246 98.297 T 20-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMC99_RS06895 e814a51c6b05d40ecb311095935856be 246 PANTHER PTHR32125:SF1 7 230 2.6E-86 T 20-04-2016 AMC99_RS06895 e814a51c6b05d40ecb311095935856be 246 Gene3D G3DSA:3.40.1280.10 4 162 7.1E-57 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMC99_RS06895 e814a51c6b05d40ecb311095935856be 246 SUPERFAMILY SSF75217 2 230 7.19E-86 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases AMC99_RS06895 e814a51c6b05d40ecb311095935856be 246 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 6 231 1.9E-73 T 20-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMC99_RS06895 e814a51c6b05d40ecb311095935856be 246 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 25 223 1.5E-47 T 20-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMC99_RS09705 44abcfd3629bc43b0f080186d7f13d3a 235 SUPERFAMILY SSF55846 9 159 1.83E-52 T 20-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMC99_RS09705 44abcfd3629bc43b0f080186d7f13d3a 235 PANTHER PTHR30417 2 235 2.5E-55 T 20-04-2016 AMC99_RS09705 44abcfd3629bc43b0f080186d7f13d3a 235 Gene3D G3DSA:3.40.80.10 8 159 4.2E-52 T 20-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMC99_RS09705 44abcfd3629bc43b0f080186d7f13d3a 235 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 21 147 2.3E-23 T 20-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMC99_RS09705 44abcfd3629bc43b0f080186d7f13d3a 235 SMART SM00644 12 147 1.7E-34 T 20-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMC99_RS09705 44abcfd3629bc43b0f080186d7f13d3a 235 SUPERFAMILY SSF47090 178 226 3.53E-10 T 20-04-2016 IPR002477 Peptidoglycan binding-like AMC99_RS01340 f850084f8aee683d7febeb56a0cc48dc 293 SUPERFAMILY SSF103481 189 287 1.57E-12 T 20-04-2016 AMC99_RS01340 f850084f8aee683d7febeb56a0cc48dc 293 Pfam PF00892 EamA-like transporter family 154 283 4.9E-10 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_RS01340 f850084f8aee683d7febeb56a0cc48dc 293 Pfam PF00892 EamA-like transporter family 10 139 1.6E-11 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_RS01340 f850084f8aee683d7febeb56a0cc48dc 293 SUPERFAMILY SSF103481 49 142 2.88E-12 T 20-04-2016 AMC99_RS01340 f850084f8aee683d7febeb56a0cc48dc 293 PANTHER PTHR22911 1 286 5.0E-38 T 20-04-2016 AMC99_RS07720 98080c84c3e5091974f1aad79788a9f6 401 PIRSF PIRSF001434 4 400 3.6E-115 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMC99_RS07720 98080c84c3e5091974f1aad79788a9f6 401 PANTHER PTHR11808:SF36 15 401 1.3E-164 T 20-04-2016 AMC99_RS07720 98080c84c3e5091974f1aad79788a9f6 401 PANTHER PTHR11808 15 401 1.3E-164 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMC99_RS07720 98080c84c3e5091974f1aad79788a9f6 401 Gene3D G3DSA:3.40.640.10 16 265 8.0E-83 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS07720 98080c84c3e5091974f1aad79788a9f6 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 19 397 5.3E-117 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMC99_RS07720 98080c84c3e5091974f1aad79788a9f6 401 Gene3D G3DSA:3.90.1150.10 266 398 6.5E-37 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS07720 98080c84c3e5091974f1aad79788a9f6 401 SUPERFAMILY SSF53383 42 398 5.5E-101 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 Gene3D G3DSA:3.30.420.40 16 94 4.1E-14 T 20-04-2016 AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 Gene3D G3DSA:3.30.420.40 172 213 4.1E-14 T 20-04-2016 AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 16 392 2.0E-85 T 20-04-2016 IPR020823 Cell division protein FtsA GO:0007049 AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 Gene3D G3DSA:3.30.420.40 311 366 8.6E-19 T 20-04-2016 AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 Gene3D G3DSA:3.30.420.40 214 238 8.6E-19 T 20-04-2016 AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 Pfam PF14450 Cell division protein FtsA 211 387 5.2E-14 T 20-04-2016 AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 SUPERFAMILY SSF53067 203 392 1.8E-30 T 20-04-2016 AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 PANTHER PTHR32432:SF4 2 412 5.1E-81 T 20-04-2016 AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 Hamap MF_02033 Cell division protein FtsA [ftsA]. 10 430 22.376 T 20-04-2016 IPR020823 Cell division protein FtsA GO:0007049 AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 Pfam PF02491 SHS2 domain inserted in FTSA 90 165 2.7E-19 T 20-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 SUPERFAMILY SSF53067 14 201 9.84E-46 T 20-04-2016 AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 Gene3D G3DSA:3.90.640.10 239 310 9.8E-8 T 20-04-2016 AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 PANTHER PTHR32432 2 412 5.1E-81 T 20-04-2016 AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 Gene3D G3DSA:3.30.1490.110 95 168 3.3E-19 T 20-04-2016 AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 PIRSF PIRSF003101 5 430 5.5E-123 T 20-04-2016 IPR020823 Cell division protein FtsA GO:0007049 AMC99_RS09080 e34cd190df38dfbaf964d20d3e91551d 430 SMART SM00842 14 200 5.0E-71 T 20-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AMC99_RS12360 2e6e475d3bdc04aba7bde9cf067b54ba 153 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 50 66 - T 20-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMC99_RS12360 2e6e475d3bdc04aba7bde9cf067b54ba 153 Gene3D G3DSA:3.40.930.10 16 148 1.9E-38 T 20-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMC99_RS12360 2e6e475d3bdc04aba7bde9cf067b54ba 153 PANTHER PTHR30505 17 146 8.1E-37 T 20-04-2016 AMC99_RS12360 2e6e475d3bdc04aba7bde9cf067b54ba 153 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 15 146 3.8E-30 T 20-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMC99_RS12360 2e6e475d3bdc04aba7bde9cf067b54ba 153 SUPERFAMILY SSF55804 16 146 2.88E-35 T 20-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 AMC99_RS12360 2e6e475d3bdc04aba7bde9cf067b54ba 153 PANTHER PTHR30505:SF6 17 146 8.1E-37 T 20-04-2016 AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 451 633 6.0E-77 T 20-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 SUPERFAMILY SSF52540 461 636 1.97E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 84 99 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 Pfam PF01583 Adenylylsulphate kinase 469 621 9.7E-72 T 20-04-2016 AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 Gene3D G3DSA:2.40.30.10 340 438 9.3E-6 T 20-04-2016 AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 PRINTS PR00315 GTP-binding elongation factor signature 164 173 4.1E-13 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 PRINTS PR00315 GTP-binding elongation factor signature 111 121 4.1E-13 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 PRINTS PR00315 GTP-binding elongation factor signature 91 99 4.1E-13 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 PRINTS PR00315 GTP-binding elongation factor signature 30 43 4.1E-13 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 PRINTS PR00315 GTP-binding elongation factor signature 127 138 4.1E-13 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 20 468 50.596 T 20-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 SUPERFAMILY SSF50465 333 439 1.82E-30 T 20-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 PANTHER PTHR11055 445 633 3.1E-123 T 20-04-2016 AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 SUPERFAMILY SSF52540 24 254 1.74E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 SUPERFAMILY SSF50447 242 330 2.5E-25 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 Pfam PF00009 Elongation factor Tu GTP binding domain 27 214 6.4E-43 T 20-04-2016 AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 Gene3D G3DSA:2.40.30.10 242 339 1.1E-25 T 20-04-2016 AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 29 439 9.6E-191 T 20-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 Gene3D G3DSA:3.40.50.300 447 635 1.0E-85 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 467 639 37.704 T 20-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 AMC99_RS04270 f85fdf820b9c35f9026a5d09a4ab5295 639 Gene3D G3DSA:3.40.50.300 16 235 2.1E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03055 f34aa321591ec084020203f7dac993d0 121 Pfam PF11776 Nickel/cobalt transporter regulator 66 114 1.7E-12 T 20-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB AMC99_RS00665 d20d2b2bf3eb4fe4f928753e3ec23050 233 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 4 228 3.4E-74 T 20-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 AMC99_RS00665 d20d2b2bf3eb4fe4f928753e3ec23050 233 Pfam PF02665 Nitrate reductase gamma subunit 7 227 2.7E-80 T 20-04-2016 IPR023234 NarG-like domain AMC99_RS00665 d20d2b2bf3eb4fe4f928753e3ec23050 233 PANTHER PTHR30598:SF3 1 228 2.6E-77 T 20-04-2016 AMC99_RS00665 d20d2b2bf3eb4fe4f928753e3ec23050 233 PANTHER PTHR30598 1 228 2.6E-77 T 20-04-2016 AMC99_RS00665 d20d2b2bf3eb4fe4f928753e3ec23050 233 SUPERFAMILY SSF103501 4 227 2.88E-62 T 20-04-2016 IPR023234 NarG-like domain AMC99_RS00665 d20d2b2bf3eb4fe4f928753e3ec23050 233 Gene3D G3DSA:1.20.950.20 4 218 1.0E-66 T 20-04-2016 AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 PANTHER PTHR30562 16 489 3.6E-234 T 20-04-2016 AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 43 631 2.7E-165 T 20-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 Gene3D G3DSA:1.10.150.20 599 653 1.3E-20 T 20-04-2016 AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 SUPERFAMILY SSF82771 51 134 1.26E-17 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 PANTHER PTHR30562:SF1 16 489 3.6E-234 T 20-04-2016 AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 SMART SM00278 599 618 0.91 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 SMART SM00278 631 650 4.1 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 Gene3D G3DSA:3.40.1440.10 52 130 4.9E-6 T 20-04-2016 IPR027299 GIY-YIG domain AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 PANTHER PTHR30562 505 651 3.6E-234 T 20-04-2016 AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 416 585 1.3E-48 T 20-04-2016 IPR001162 UvrC family homology region AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 SMART SM00465 51 132 4.5E-16 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 SUPERFAMILY SSF47781 564 652 2.64E-20 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 Pfam PF02151 UvrB/uvrC motif 239 269 1.1E-7 T 20-04-2016 IPR001943 UVR domain GO:0005515 AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 Hamap MF_00203 UvrABC system protein C [uvrC]. 38 650 26.941 T 20-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 Pfam PF01541 GIY-YIG catalytic domain 53 124 6.4E-7 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 Gene3D G3DSA:4.10.860.10 217 269 2.1E-15 T 20-04-2016 IPR001943 UVR domain GO:0005515 AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 Pfam PF14520 Helix-hairpin-helix domain 601 648 2.2E-7 T 20-04-2016 AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 SUPERFAMILY SSF46600 225 274 1.2E-11 T 20-04-2016 IPR001943 UVR domain GO:0005515 AMC99_RS02565 b41cdf6dc678106e82607b75de4f493c 655 PANTHER PTHR30562:SF1 505 651 3.6E-234 T 20-04-2016 AMC99_RS11760 b7df78d9e3b2ca49e76ac3c9b14aa211 63 PANTHER PTHR10245 1 63 6.5E-26 T 20-04-2016 AMC99_RS11760 b7df78d9e3b2ca49e76ac3c9b14aa211 63 Pfam PF01381 Helix-turn-helix 5 58 2.5E-14 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS11760 b7df78d9e3b2ca49e76ac3c9b14aa211 63 SMART SM00530 4 59 1.3E-16 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS11760 b7df78d9e3b2ca49e76ac3c9b14aa211 63 Gene3D G3DSA:1.10.260.40 1 62 7.1E-25 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS11760 b7df78d9e3b2ca49e76ac3c9b14aa211 63 SUPERFAMILY SSF47413 2 61 9.85E-19 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS11760 b7df78d9e3b2ca49e76ac3c9b14aa211 63 PANTHER PTHR10245:SF26 1 63 6.5E-26 T 20-04-2016 AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 SUPERFAMILY SSF52210 123 292 3.14E-54 T 20-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 SMART SM00881 4 100 4.1E-29 T 20-04-2016 IPR003781 CoA-binding GO:0048037 AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 PIRSF PIRSF001553 1 295 4.2E-128 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 PANTHER PTHR11117 1 295 3.3E-189 T 20-04-2016 AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.7E-39 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 PRINTS PR01798 Succinyl-CoA synthase signature 244 261 2.7E-39 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.7E-39 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.7E-39 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 Gene3D G3DSA:3.40.50.261 120 290 1.3E-71 T 20-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 292 1.9E-135 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 Pfam PF00549 CoA-ligase 151 274 8.7E-20 T 20-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 240 253 - T 20-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 Gene3D G3DSA:3.40.50.720 2 119 9.3E-56 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 SUPERFAMILY SSF51735 1 122 5.69E-41 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS07350 a50a5d0540c0cd75ab595f5e56d39f82 296 Pfam PF02629 CoA binding domain 6 99 1.3E-27 T 20-04-2016 IPR003781 CoA-binding GO:0048037 AMC99_RS01620 e5b06f27a78a4cf644916932ac39a8e6 328 SMART SM00418 5 92 4.1E-19 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS01620 e5b06f27a78a4cf644916932ac39a8e6 328 Pfam PF08241 Methyltransferase domain 160 256 2.3E-24 T 20-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AMC99_RS01620 e5b06f27a78a4cf644916932ac39a8e6 328 SUPERFAMILY SSF46785 1 69 1.06E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01620 e5b06f27a78a4cf644916932ac39a8e6 328 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 26 37 1.8E-15 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS01620 e5b06f27a78a4cf644916932ac39a8e6 328 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 1.8E-15 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS01620 e5b06f27a78a4cf644916932ac39a8e6 328 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.8E-15 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS01620 e5b06f27a78a4cf644916932ac39a8e6 328 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 1.8E-15 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS01620 e5b06f27a78a4cf644916932ac39a8e6 328 SUPERFAMILY SSF53335 120 298 5.42E-42 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS01620 e5b06f27a78a4cf644916932ac39a8e6 328 Gene3D G3DSA:1.10.10.10 2 70 2.4E-23 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01620 e5b06f27a78a4cf644916932ac39a8e6 328 PANTHER PTHR10108 122 293 2.2E-34 T 20-04-2016 AMC99_RS01620 e5b06f27a78a4cf644916932ac39a8e6 328 Pfam PF12840 Helix-turn-helix domain 4 62 1.7E-14 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01620 e5b06f27a78a4cf644916932ac39a8e6 328 Gene3D G3DSA:3.40.50.150 120 294 1.3E-40 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS02775 71d38d722c2e7b924f2a975574850924 277 Gene3D G3DSA:1.10.287.70 4 74 6.1E-20 T 20-04-2016 AMC99_RS02775 71d38d722c2e7b924f2a975574850924 277 PANTHER PTHR11403 1 272 3.7E-114 T 20-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 AMC99_RS02775 71d38d722c2e7b924f2a975574850924 277 Pfam PF00510 Cytochrome c oxidase subunit III 7 269 1.8E-90 T 20-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 AMC99_RS02775 71d38d722c2e7b924f2a975574850924 277 SUPERFAMILY SSF81452 5 269 8.11E-90 T 20-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 AMC99_RS02775 71d38d722c2e7b924f2a975574850924 277 Gene3D G3DSA:1.20.120.80 76 269 1.0E-70 T 20-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 AMC99_RS02775 71d38d722c2e7b924f2a975574850924 277 PANTHER PTHR11403:SF7 1 272 3.7E-114 T 20-04-2016 AMC99_RS07175 e27bdf6be6e6130fdaa8b408451371bf 293 PANTHER PTHR12128 1 292 7.0E-114 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMC99_RS07175 e27bdf6be6e6130fdaa8b408451371bf 293 Gene3D G3DSA:3.20.20.70 1 292 3.4E-103 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS07175 e27bdf6be6e6130fdaa8b408451371bf 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 37 54 - T 20-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS07175 e27bdf6be6e6130fdaa8b408451371bf 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 5.5E-27 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMC99_RS07175 e27bdf6be6e6130fdaa8b408451371bf 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 5.5E-27 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMC99_RS07175 e27bdf6be6e6130fdaa8b408451371bf 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 5.5E-27 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMC99_RS07175 e27bdf6be6e6130fdaa8b408451371bf 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 5.5E-27 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMC99_RS07175 e27bdf6be6e6130fdaa8b408451371bf 293 SMART SM01130 1 291 1.9E-131 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMC99_RS07175 e27bdf6be6e6130fdaa8b408451371bf 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 289 2.8E-93 T 20-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS07175 e27bdf6be6e6130fdaa8b408451371bf 293 PIRSF PIRSF001365 1 293 2.1E-83 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMC99_RS07175 e27bdf6be6e6130fdaa8b408451371bf 293 PANTHER PTHR12128:SF34 1 292 7.0E-114 T 20-04-2016 AMC99_RS07175 e27bdf6be6e6130fdaa8b408451371bf 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 289 2.9E-78 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMC99_RS07175 e27bdf6be6e6130fdaa8b408451371bf 293 SUPERFAMILY SSF51569 1 292 1.15E-91 T 20-04-2016 AMC99_RS07175 e27bdf6be6e6130fdaa8b408451371bf 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 289 60.336 T 20-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS05855 e2de998ca3ba64e2db18857e004c1f0e 154 Pfam PF13202 EF hand 95 113 0.0088 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 AMC99_RS05855 e2de998ca3ba64e2db18857e004c1f0e 154 Pfam PF13202 EF hand 121 139 0.052 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 AMC99_RS05855 e2de998ca3ba64e2db18857e004c1f0e 154 Gene3D G3DSA:1.10.238.10 60 104 7.5E-5 T 20-04-2016 IPR011992 EF-hand domain pair AMC99_RS05855 e2de998ca3ba64e2db18857e004c1f0e 154 Gene3D G3DSA:1.10.238.10 105 139 1.6E-4 T 20-04-2016 IPR011992 EF-hand domain pair AMC99_RS05855 e2de998ca3ba64e2db18857e004c1f0e 154 ProSitePatterns PS00018 EF-hand calcium-binding domain. 101 113 - T 20-04-2016 IPR018247 EF-Hand 1, calcium-binding site AMC99_RS05855 e2de998ca3ba64e2db18857e004c1f0e 154 ProSitePatterns PS00018 EF-hand calcium-binding domain. 125 137 - T 20-04-2016 IPR018247 EF-Hand 1, calcium-binding site AMC99_RS05855 e2de998ca3ba64e2db18857e004c1f0e 154 SUPERFAMILY SSF47473 65 139 2.58E-11 T 20-04-2016 IPR011992 EF-hand domain pair AMC99_RS03670 a72575c3c8433e185d8a83f827db61ae 398 Gene3D G3DSA:1.10.357.10 216 394 7.5E-26 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMC99_RS03670 a72575c3c8433e185d8a83f827db61ae 398 SUPERFAMILY SSF46689 6 84 1.89E-13 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS03670 a72575c3c8433e185d8a83f827db61ae 398 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 221 234 3.1E-6 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS03670 a72575c3c8433e185d8a83f827db61ae 398 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 242 265 3.1E-6 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS03670 a72575c3c8433e185d8a83f827db61ae 398 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 3.3E-7 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS03670 a72575c3c8433e185d8a83f827db61ae 398 Pfam PF00440 Bacterial regulatory proteins, tetR family 222 267 3.0E-10 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS03670 a72575c3c8433e185d8a83f827db61ae 398 SUPERFAMILY SSF48498 313 386 1.31E-7 T 20-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMC99_RS03670 a72575c3c8433e185d8a83f827db61ae 398 Gene3D G3DSA:1.10.357.10 6 194 4.3E-24 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMC99_RS03670 a72575c3c8433e185d8a83f827db61ae 398 PANTHER PTHR30328 193 398 8.4E-18 T 20-04-2016 AMC99_RS03670 a72575c3c8433e185d8a83f827db61ae 398 SUPERFAMILY SSF46689 215 282 4.45E-13 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS00445 706363fd2bd39ddf88e884c974351306 134 Gene3D G3DSA:1.10.1660.10 56 129 1.2E-25 T 20-04-2016 AMC99_RS00445 706363fd2bd39ddf88e884c974351306 134 Gene3D G3DSA:1.10.1660.10 1 55 8.5E-25 T 20-04-2016 AMC99_RS00445 706363fd2bd39ddf88e884c974351306 134 PANTHER PTHR30204:SF16 1 127 1.9E-35 T 20-04-2016 AMC99_RS00445 706363fd2bd39ddf88e884c974351306 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.8E-11 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_RS00445 706363fd2bd39ddf88e884c974351306 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.8E-11 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_RS00445 706363fd2bd39ddf88e884c974351306 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.8E-11 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_RS00445 706363fd2bd39ddf88e884c974351306 134 SUPERFAMILY SSF46955 1 126 1.47E-36 T 20-04-2016 IPR009061 Putative DNA-binding domain AMC99_RS00445 706363fd2bd39ddf88e884c974351306 134 SMART SM00422 1 70 4.1E-30 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_RS00445 706363fd2bd39ddf88e884c974351306 134 PANTHER PTHR30204 1 127 1.9E-35 T 20-04-2016 AMC99_RS00445 706363fd2bd39ddf88e884c974351306 134 Pfam PF13411 MerR HTH family regulatory protein 1 67 2.3E-19 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_RS06820 396c59fc59a897f33ae560ef6242cbb7 322 Pfam PF08447 PAS fold 39 121 9.6E-18 T 20-04-2016 IPR013655 PAS fold-3 GO:0005515 AMC99_RS06820 396c59fc59a897f33ae560ef6242cbb7 322 PANTHER PTHR41523 94 321 6.7E-34 T 20-04-2016 AMC99_RS06820 396c59fc59a897f33ae560ef6242cbb7 322 SMART SM00911 142 225 7.7E-24 T 20-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_RS06820 396c59fc59a897f33ae560ef6242cbb7 322 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 136 1.2E-11 T 20-04-2016 IPR000014 PAS domain AMC99_RS06820 396c59fc59a897f33ae560ef6242cbb7 322 Gene3D G3DSA:3.30.450.20 11 127 1.9E-23 T 20-04-2016 AMC99_RS06820 396c59fc59a897f33ae560ef6242cbb7 322 SUPERFAMILY SSF55785 23 131 6.81E-20 T 20-04-2016 IPR000014 PAS domain AMC99_RS06820 396c59fc59a897f33ae560ef6242cbb7 322 Pfam PF07536 HWE histidine kinase 142 219 4.1E-19 T 20-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_RS06820 396c59fc59a897f33ae560ef6242cbb7 322 SMART SM00086 87 129 1.7E-8 T 20-04-2016 IPR001610 PAC motif AMC99_RS02570 33c00b874321e9d0a17ee79c5d9f3f13 608 SMART SM00490 257 338 3.6E-25 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS02570 33c00b874321e9d0a17ee79c5d9f3f13 608 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 20-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMC99_RS02570 33c00b874321e9d0a17ee79c5d9f3f13 608 Pfam PF00270 DEAD/DEAH box helicase 23 192 4.8E-43 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_RS02570 33c00b874321e9d0a17ee79c5d9f3f13 608 Pfam PF03880 DbpA RNA binding domain 458 517 9.3E-13 T 20-04-2016 IPR005580 DbpA, RNA-binding domain AMC99_RS02570 33c00b874321e9d0a17ee79c5d9f3f13 608 PANTHER PTHR24031:SF145 424 434 3.9E-126 T 20-04-2016 AMC99_RS02570 33c00b874321e9d0a17ee79c5d9f3f13 608 PANTHER PTHR24031:SF145 5 351 3.9E-126 T 20-04-2016 AMC99_RS02570 33c00b874321e9d0a17ee79c5d9f3f13 608 Gene3D G3DSA:3.40.50.300 218 361 4.4E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02570 33c00b874321e9d0a17ee79c5d9f3f13 608 SMART SM00487 18 221 1.4E-50 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_RS02570 33c00b874321e9d0a17ee79c5d9f3f13 608 Gene3D G3DSA:3.40.50.300 5 213 1.3E-65 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02570 33c00b874321e9d0a17ee79c5d9f3f13 608 PANTHER PTHR24031 424 434 3.9E-126 T 20-04-2016 AMC99_RS02570 33c00b874321e9d0a17ee79c5d9f3f13 608 PANTHER PTHR24031 5 351 3.9E-126 T 20-04-2016 AMC99_RS02570 33c00b874321e9d0a17ee79c5d9f3f13 608 SUPERFAMILY SSF52540 74 353 2.89E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02570 33c00b874321e9d0a17ee79c5d9f3f13 608 Pfam PF00271 Helicase conserved C-terminal domain 233 338 2.3E-23 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS10670 b2e6aa37e52d5408089fefbc201e4075 704 SUPERFAMILY SSF56935 428 704 5.72E-69 T 20-04-2016 AMC99_RS10670 b2e6aa37e52d5408089fefbc201e4075 704 SUPERFAMILY SSF56935 40 399 5.72E-69 T 20-04-2016 AMC99_RS10670 b2e6aa37e52d5408089fefbc201e4075 704 Gene3D G3DSA:2.40.170.20 170 704 5.8E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS10670 b2e6aa37e52d5408089fefbc201e4075 704 Gene3D G3DSA:2.170.130.10 70 156 2.4E-7 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS10670 b2e6aa37e52d5408089fefbc201e4075 704 Pfam PF00593 TonB dependent receptor 440 701 2.0E-20 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS10670 b2e6aa37e52d5408089fefbc201e4075 704 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 47 - T 20-04-2016 IPR010916 TonB box, conserved site AMC99_RS06700 bd1d9d92ba1dae6b5b7300af579b61b2 696 SUPERFAMILY SSF55073 130 287 1.41E-45 T 20-04-2016 IPR029787 Nucleotide cyclase AMC99_RS06700 bd1d9d92ba1dae6b5b7300af579b61b2 696 Gene3D G3DSA:3.30.450.20 12 113 5.4E-9 T 20-04-2016 AMC99_RS06700 bd1d9d92ba1dae6b5b7300af579b61b2 696 PANTHER PTHR10799 82 396 2.1E-70 T 20-04-2016 AMC99_RS06700 bd1d9d92ba1dae6b5b7300af579b61b2 696 Gene3D G3DSA:3.20.20.450 299 543 3.3E-72 T 20-04-2016 IPR001633 EAL domain AMC99_RS06700 bd1d9d92ba1dae6b5b7300af579b61b2 696 Gene3D G3DSA:3.30.70.270 127 292 2.8E-50 T 20-04-2016 AMC99_RS06700 bd1d9d92ba1dae6b5b7300af579b61b2 696 PANTHER PTHR10799:SF657 82 396 2.1E-70 T 20-04-2016 AMC99_RS06700 bd1d9d92ba1dae6b5b7300af579b61b2 696 SUPERFAMILY SSF55785 12 112 5.76E-9 T 20-04-2016 IPR000014 PAS domain AMC99_RS06700 bd1d9d92ba1dae6b5b7300af579b61b2 696 Pfam PF00563 EAL domain 303 534 4.7E-57 T 20-04-2016 IPR001633 EAL domain AMC99_RS06700 bd1d9d92ba1dae6b5b7300af579b61b2 696 Pfam PF08448 PAS fold 8 115 1.1E-5 T 20-04-2016 IPR013656 PAS fold-4 AMC99_RS06700 bd1d9d92ba1dae6b5b7300af579b61b2 696 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 122 284 7.0E-39 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS06700 bd1d9d92ba1dae6b5b7300af579b61b2 696 SMART SM00052 296 539 1.3E-72 T 20-04-2016 IPR001633 EAL domain AMC99_RS06700 bd1d9d92ba1dae6b5b7300af579b61b2 696 Pfam PF00990 Diguanylate cyclase, GGDEF domain 125 281 1.0E-40 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS06700 bd1d9d92ba1dae6b5b7300af579b61b2 696 SUPERFAMILY SSF141868 301 543 7.45E-65 T 20-04-2016 IPR001633 EAL domain AMC99_RS06700 bd1d9d92ba1dae6b5b7300af579b61b2 696 SMART SM00267 114 286 1.2E-45 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS11865 60933ea5f2c2e898a4d85fc25bdafd48 543 SUPERFAMILY SSF103473 39 238 3.01E-26 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS11865 60933ea5f2c2e898a4d85fc25bdafd48 543 SUPERFAMILY SSF103473 278 508 3.01E-26 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS11865 60933ea5f2c2e898a4d85fc25bdafd48 543 PANTHER PTHR11654:SF119 27 255 3.5E-135 T 20-04-2016 AMC99_RS11865 60933ea5f2c2e898a4d85fc25bdafd48 543 PANTHER PTHR11654:SF119 290 542 3.5E-135 T 20-04-2016 AMC99_RS11865 60933ea5f2c2e898a4d85fc25bdafd48 543 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 38 508 1.3E-105 T 20-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AMC99_RS11865 60933ea5f2c2e898a4d85fc25bdafd48 543 Pfam PF00854 POT family 112 463 5.4E-55 T 20-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS11865 60933ea5f2c2e898a4d85fc25bdafd48 543 PANTHER PTHR11654 27 255 3.5E-135 T 20-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS11865 60933ea5f2c2e898a4d85fc25bdafd48 543 PANTHER PTHR11654 290 542 3.5E-135 T 20-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS11865 60933ea5f2c2e898a4d85fc25bdafd48 543 Gene3D G3DSA:1.20.1250.20 46 230 8.9E-15 T 20-04-2016 AMC99_RS12735 b6d72815bc8b2b9fd42357b3c7618d90 370 Pfam PF00534 Glycosyl transferases group 1 204 329 3.4E-9 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 AMC99_RS12735 b6d72815bc8b2b9fd42357b3c7618d90 370 SUPERFAMILY SSF53756 19 347 5.34E-34 T 20-04-2016 AMC99_RS12735 b6d72815bc8b2b9fd42357b3c7618d90 370 Gene3D G3DSA:3.40.50.2000 242 329 6.9E-10 T 20-04-2016 AMC99_RS12735 b6d72815bc8b2b9fd42357b3c7618d90 370 PANTHER PTHR12526 1 330 2.2E-25 T 20-04-2016 AMC99_RS12735 b6d72815bc8b2b9fd42357b3c7618d90 370 Pfam PF13579 Glycosyl transferase 4-like domain 20 188 1.4E-8 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMC99_RS02390 091d2815a192fd27108b453a5c44b271 341 PANTHER PTHR10584 10 329 6.7E-71 T 20-04-2016 AMC99_RS02390 091d2815a192fd27108b453a5c44b271 341 SUPERFAMILY SSF53613 9 332 2.34E-60 T 20-04-2016 IPR029056 Ribokinase-like AMC99_RS02390 091d2815a192fd27108b453a5c44b271 341 Gene3D G3DSA:3.40.1190.20 9 332 9.4E-67 T 20-04-2016 IPR029056 Ribokinase-like AMC99_RS02390 091d2815a192fd27108b453a5c44b271 341 PANTHER PTHR10584:SF203 10 329 6.7E-71 T 20-04-2016 AMC99_RS02390 091d2815a192fd27108b453a5c44b271 341 Pfam PF00294 pfkB family carbohydrate kinase 10 314 8.7E-30 T 20-04-2016 IPR011611 Carbohydrate kinase PfkB AMC99_RS00990 4b1e90ed3682c92c1b56159c0c8efc97 396 SUPERFAMILY SSF56024 202 365 1.41E-24 T 20-04-2016 AMC99_RS00990 4b1e90ed3682c92c1b56159c0c8efc97 396 PANTHER PTHR21248 28 391 3.5E-53 T 20-04-2016 AMC99_RS00990 4b1e90ed3682c92c1b56159c0c8efc97 396 SMART SM00155 122 149 1.1E-5 T 20-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 AMC99_RS00990 4b1e90ed3682c92c1b56159c0c8efc97 396 SMART SM00155 297 323 1.2E-5 T 20-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 AMC99_RS00990 4b1e90ed3682c92c1b56159c0c8efc97 396 SUPERFAMILY SSF56024 21 214 1.5E-40 T 20-04-2016 AMC99_RS00990 4b1e90ed3682c92c1b56159c0c8efc97 396 Gene3D G3DSA:3.30.870.10 28 206 2.2E-38 T 20-04-2016 AMC99_RS00990 4b1e90ed3682c92c1b56159c0c8efc97 396 Pfam PF13091 PLD-like domain 44 179 7.4E-17 T 20-04-2016 IPR025202 Phospholipase D-like domain AMC99_RS00990 4b1e90ed3682c92c1b56159c0c8efc97 396 Pfam PF13091 PLD-like domain 232 347 1.2E-18 T 20-04-2016 IPR025202 Phospholipase D-like domain AMC99_RS00990 4b1e90ed3682c92c1b56159c0c8efc97 396 Gene3D G3DSA:3.30.870.10 223 358 1.2E-23 T 20-04-2016 AMC99_RS00990 4b1e90ed3682c92c1b56159c0c8efc97 396 PANTHER PTHR21248:SF5 28 391 3.5E-53 T 20-04-2016 AMC99_RS04385 bcb8f43df9d33a270a036c23a7a0e571 370 PANTHER PTHR32039 15 366 1.3E-93 T 20-04-2016 AMC99_RS04385 bcb8f43df9d33a270a036c23a7a0e571 370 Pfam PF02481 DNA recombination-mediator protein A 75 278 1.6E-72 T 20-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 AMC99_RS04385 bcb8f43df9d33a270a036c23a7a0e571 370 SUPERFAMILY SSF102405 84 287 7.78E-42 T 20-04-2016 AMC99_RS04385 bcb8f43df9d33a270a036c23a7a0e571 370 Gene3D G3DSA:3.40.50.450 115 288 5.9E-13 T 20-04-2016 AMC99_RS04385 bcb8f43df9d33a270a036c23a7a0e571 370 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 74 286 4.8E-65 T 20-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 AMC99_RS04385 bcb8f43df9d33a270a036c23a7a0e571 370 PANTHER PTHR32039:SF8 15 366 1.3E-93 T 20-04-2016 AMC99_RS08715 49683672005ab488f609e42366b38f31 190 PRINTS PR01576 Peptide deformylase signature 125 143 1.7E-35 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMC99_RS08715 49683672005ab488f609e42366b38f31 190 PRINTS PR01576 Peptide deformylase signature 35 64 1.7E-35 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMC99_RS08715 49683672005ab488f609e42366b38f31 190 PRINTS PR01576 Peptide deformylase signature 144 173 1.7E-35 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMC99_RS08715 49683672005ab488f609e42366b38f31 190 PRINTS PR01576 Peptide deformylase signature 113 124 1.7E-35 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMC99_RS08715 49683672005ab488f609e42366b38f31 190 PANTHER PTHR10458 1 188 8.7E-73 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMC99_RS08715 49683672005ab488f609e42366b38f31 190 PIRSF PIRSF004749 1 190 1.3E-57 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMC99_RS08715 49683672005ab488f609e42366b38f31 190 Gene3D G3DSA:3.90.45.10 5 188 3.9E-67 T 20-04-2016 IPR023635 Peptide deformylase AMC99_RS08715 49683672005ab488f609e42366b38f31 190 SUPERFAMILY SSF56420 2 187 3.01E-61 T 20-04-2016 IPR023635 Peptide deformylase AMC99_RS08715 49683672005ab488f609e42366b38f31 190 Pfam PF01327 Polypeptide deformylase 4 176 3.0E-54 T 20-04-2016 IPR023635 Peptide deformylase AMC99_RS08715 49683672005ab488f609e42366b38f31 190 Hamap MF_00163 Peptide deformylase [def]. 2 186 32.037 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMC99_RS08715 49683672005ab488f609e42366b38f31 190 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 90 184 8.8E-32 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMC99_RS08715 49683672005ab488f609e42366b38f31 190 PANTHER PTHR10458:SF10 1 188 8.7E-73 T 20-04-2016 AMC99_RS03685 38cd0bb43af8739e6327c775af6aed3b 67 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 4.1E-12 T 20-04-2016 IPR021309 Protein of unknown function DUF2892 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 Gene3D G3DSA:1.10.287.380 837 909 5.6E-12 T 20-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 598 9.3E-185 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 SUPERFAMILY SSF52374 4 194 5.01E-135 T 20-04-2016 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 SUPERFAMILY SSF52374 376 608 5.01E-135 T 20-04-2016 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 Hamap MF_02004 Valine--tRNA ligase [valS]. 5 909 15.147 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 844 909 7.3E-16 T 20-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 Gene3D G3DSA:3.90.740.10 197 353 6.7E-38 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 SUPERFAMILY SSF50677 194 354 4.45E-47 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 PANTHER PTHR11946 1 822 0.0 T 20-04-2016 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 PANTHER PTHR11946 840 902 0.0 T 20-04-2016 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 SUPERFAMILY SSF47323 611 857 8.6E-50 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 Pfam PF08264 Anticodon-binding domain of tRNA 641 785 3.6E-36 T 20-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 PRINTS PR00986 Valyl-tRNA synthetase signature 510 528 3.8E-34 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 PRINTS PR00986 Valyl-tRNA synthetase signature 381 394 3.8E-34 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 PRINTS PR00986 Valyl-tRNA synthetase signature 479 500 3.8E-34 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 PRINTS PR00986 Valyl-tRNA synthetase signature 38 49 3.8E-34 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 PRINTS PR00986 Valyl-tRNA synthetase signature 238 255 3.8E-34 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 890 9.7E-303 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 Gene3D G3DSA:3.40.50.620 376 596 1.3E-139 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 Gene3D G3DSA:3.40.50.620 8 195 1.3E-139 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 Gene3D G3DSA:1.10.730.10 598 776 6.5E-56 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 PANTHER PTHR11946:SF5 1 822 0.0 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 PANTHER PTHR11946:SF5 840 902 0.0 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS09630 651bada7f881715ad9f7f757a667f65a 909 SUPERFAMILY SSF46589 844 908 3.77E-13 T 20-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 AMC99_RS01000 db84ed8b270e0b22f2d94f0beb39d516 161 Pfam PF06793 Uncharacterised protein family (UPF0262) 5 160 2.1E-66 T 20-04-2016 IPR008321 Uncharacterised conserved protein UCP032146 AMC99_RS01000 db84ed8b270e0b22f2d94f0beb39d516 161 PIRSF PIRSF032146 1 161 2.9E-61 T 20-04-2016 IPR008321 Uncharacterised conserved protein UCP032146 AMC99_RS01000 db84ed8b270e0b22f2d94f0beb39d516 161 Hamap MF_00678 UPF0262 protein . 4 160 37.652 T 20-04-2016 IPR008321 Uncharacterised conserved protein UCP032146 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 Pfam PF08264 Anticodon-binding domain of tRNA 770 927 1.0E-21 T 20-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 5 994 18.947 T 20-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 SUPERFAMILY SSF52374 461 485 2.41E-130 T 20-04-2016 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 SUPERFAMILY SSF52374 515 734 2.41E-130 T 20-04-2016 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 SUPERFAMILY SSF52374 7 216 2.41E-130 T 20-04-2016 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 Gene3D G3DSA:3.90.740.10 329 434 4.3E-41 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 Gene3D G3DSA:3.90.740.10 221 289 4.3E-41 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 Gene3D G3DSA:1.10.730.10 728 910 6.2E-34 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 54 65 2.4E-18 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 459 474 2.4E-18 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 611 624 2.4E-18 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 647 656 2.4E-18 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 61 72 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 PANTHER PTHR11946:SF11 9 265 0.0 T 20-04-2016 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 PANTHER PTHR11946:SF11 328 484 0.0 T 20-04-2016 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 PANTHER PTHR11946:SF11 514 994 0.0 T 20-04-2016 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 SUPERFAMILY SSF47323 738 994 5.67E-53 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 338 725 1.0E-93 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 32 272 7.0E-78 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 PANTHER PTHR11946 9 265 0.0 T 20-04-2016 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 PANTHER PTHR11946 328 484 0.0 T 20-04-2016 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 PANTHER PTHR11946 514 994 0.0 T 20-04-2016 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 SUPERFAMILY SSF50677 218 424 1.44E-33 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 Gene3D G3DSA:3.40.50.620 464 723 1.6E-131 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS12910 056cac6ca4ba5fcf96d0293fa726553c 994 Gene3D G3DSA:3.40.50.620 16 214 1.6E-131 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS00995 1f7e00989515ec83b0f00771f86403c5 502 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 21 490 2.0E-148 T 20-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AMC99_RS00995 1f7e00989515ec83b0f00771f86403c5 502 SMART SM00382 215 425 4.7E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS00995 1f7e00989515ec83b0f00771f86403c5 502 Pfam PF03796 DnaB-like helicase C terminal domain 200 489 1.4E-103 T 20-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 AMC99_RS00995 1f7e00989515ec83b0f00771f86403c5 502 SUPERFAMILY SSF48024 19 129 6.02E-24 T 20-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AMC99_RS00995 1f7e00989515ec83b0f00771f86403c5 502 Pfam PF00772 DnaB-like helicase N terminal domain 20 117 6.1E-21 T 20-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AMC99_RS00995 1f7e00989515ec83b0f00771f86403c5 502 PANTHER PTHR30153 4 427 9.9E-155 T 20-04-2016 AMC99_RS00995 1f7e00989515ec83b0f00771f86403c5 502 PANTHER PTHR30153 452 500 9.9E-155 T 20-04-2016 AMC99_RS00995 1f7e00989515ec83b0f00771f86403c5 502 SUPERFAMILY SSF52540 198 423 1.29E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00995 1f7e00989515ec83b0f00771f86403c5 502 SUPERFAMILY SSF52540 457 483 1.29E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00995 1f7e00989515ec83b0f00771f86403c5 502 Gene3D G3DSA:3.40.50.300 184 491 3.1E-99 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00995 1f7e00989515ec83b0f00771f86403c5 502 Gene3D G3DSA:1.10.860.10 20 105 2.8E-19 T 20-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMC99_RS00395 2f3710ddbd58a6c7ef884922c2865511 95 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 4 92 3.6E-26 T 20-04-2016 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AMC99_RS00395 2f3710ddbd58a6c7ef884922c2865511 95 Pfam PF07178 TraL protein 5 93 8.6E-30 T 20-04-2016 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AMC99_RS10115 689a7a8b7faf0b02803b1343aba422ac 296 PANTHER PTHR30537 1 296 3.6E-44 T 20-04-2016 AMC99_RS10115 689a7a8b7faf0b02803b1343aba422ac 296 SUPERFAMILY SSF46785 1 103 5.78E-17 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS10115 689a7a8b7faf0b02803b1343aba422ac 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 56 3.0E-14 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_RS10115 689a7a8b7faf0b02803b1343aba422ac 296 SUPERFAMILY SSF53850 82 281 1.81E-23 T 20-04-2016 AMC99_RS10115 689a7a8b7faf0b02803b1343aba422ac 296 Gene3D G3DSA:1.10.10.10 1 73 7.6E-17 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS10115 689a7a8b7faf0b02803b1343aba422ac 296 Gene3D G3DSA:3.40.190.10 84 167 1.8E-17 T 20-04-2016 AMC99_RS10115 689a7a8b7faf0b02803b1343aba422ac 296 Gene3D G3DSA:3.40.190.10 168 248 4.2E-7 T 20-04-2016 AMC99_RS10115 689a7a8b7faf0b02803b1343aba422ac 296 Pfam PF03466 LysR substrate binding domain 80 278 5.8E-21 T 20-04-2016 IPR005119 LysR, substrate-binding AMC99_RS10115 689a7a8b7faf0b02803b1343aba422ac 296 PANTHER PTHR30537:SF26 1 296 3.6E-44 T 20-04-2016 AMC99_RS07305 7f31af63df13a8185c248d6cf27e787e 449 Pfam PF04575 Protein of unknown function (DUF560) 172 438 2.1E-12 T 20-04-2016 IPR007655 Protein of unknown function DUF560 AMC99_RS07305 7f31af63df13a8185c248d6cf27e787e 449 SUPERFAMILY SSF48452 41 141 9.34E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS07305 7f31af63df13a8185c248d6cf27e787e 449 Pfam PF14559 Tetratricopeptide repeat 93 141 4.0E-6 T 20-04-2016 AMC99_RS07305 7f31af63df13a8185c248d6cf27e787e 449 Gene3D G3DSA:1.25.40.10 41 165 8.0E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS10190 98902b7bb3ea37be53c29a38164db889 388 Pfam PF13356 Domain of unknown function (DUF4102) 4 90 1.1E-16 T 20-04-2016 IPR025166 Domain of unknown function DUF4102 AMC99_RS10190 98902b7bb3ea37be53c29a38164db889 388 PANTHER PTHR30629 1 387 3.6E-41 T 20-04-2016 AMC99_RS10190 98902b7bb3ea37be53c29a38164db889 388 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 96 153 5.2E-7 T 20-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMC99_RS10190 98902b7bb3ea37be53c29a38164db889 388 SUPERFAMILY SSF56349 95 373 1.24E-59 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMC99_RS10190 98902b7bb3ea37be53c29a38164db889 388 Gene3D G3DSA:1.10.150.130 96 196 1.1E-12 T 20-04-2016 IPR023109 Integrase/recombinase, N-terminal AMC99_RS10190 98902b7bb3ea37be53c29a38164db889 388 Gene3D G3DSA:1.10.443.10 200 370 7.2E-37 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_RS10190 98902b7bb3ea37be53c29a38164db889 388 Pfam PF00589 Phage integrase family 229 364 4.0E-21 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_RS09195 33031d9edb42d32ad19ade3f669ba739 102 Gene3D G3DSA:3.30.1360.20 2 101 1.8E-33 T 20-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMC99_RS09195 33031d9edb42d32ad19ade3f669ba739 102 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 3 101 22.345 T 20-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMC99_RS09195 33031d9edb42d32ad19ade3f669ba739 102 SUPERFAMILY SSF55248 4 101 3.01E-30 T 20-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMC99_RS09195 33031d9edb42d32ad19ade3f669ba739 102 PANTHER PTHR12599:SF7 3 98 3.2E-38 T 20-04-2016 AMC99_RS09195 33031d9edb42d32ad19ade3f669ba739 102 PANTHER PTHR12599 3 98 3.2E-38 T 20-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMC99_RS09195 33031d9edb42d32ad19ade3f669ba739 102 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 5 99 1.3E-29 T 20-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMC99_RS01575 5ac10743796baa1848ddf608d6b0cf0d 399 SUPERFAMILY SSF53383 3 389 1.08E-106 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS01575 5ac10743796baa1848ddf608d6b0cf0d 399 PANTHER PTHR11751:SF302 13 389 4.8E-204 T 20-04-2016 AMC99_RS01575 5ac10743796baa1848ddf608d6b0cf0d 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 20-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 AMC99_RS01575 5ac10743796baa1848ddf608d6b0cf0d 399 Pfam PF00155 Aminotransferase class I and II 32 383 2.2E-62 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMC99_RS01575 5ac10743796baa1848ddf608d6b0cf0d 399 PANTHER PTHR11751 13 389 4.8E-204 T 20-04-2016 AMC99_RS01575 5ac10743796baa1848ddf608d6b0cf0d 399 Gene3D G3DSA:3.40.640.10 45 258 2.3E-62 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS01575 5ac10743796baa1848ddf608d6b0cf0d 399 Gene3D G3DSA:3.90.1150.10 259 390 3.8E-42 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS09905 76eed9678e0187dc4ac785ec0d6f336e 461 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 12 456 6.2E-165 T 20-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AMC99_RS09905 76eed9678e0187dc4ac785ec0d6f336e 461 Gene3D G3DSA:2.40.50.140 391 458 5.7E-20 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS09905 76eed9678e0187dc4ac785ec0d6f336e 461 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 12 456 9.2E-96 T 20-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AMC99_RS09905 76eed9678e0187dc4ac785ec0d6f336e 461 PANTHER PTHR11918 1 458 1.4E-202 T 20-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein AMC99_RS09905 76eed9678e0187dc4ac785ec0d6f336e 461 SMART SM00729 145 376 1.9E-48 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMC99_RS09905 76eed9678e0187dc4ac785ec0d6f336e 461 Gene3D G3DSA:3.80.30.20 143 387 4.6E-65 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMC99_RS09905 76eed9678e0187dc4ac785ec0d6f336e 461 Pfam PF04055 Radical SAM superfamily 151 334 4.6E-27 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_RS09905 76eed9678e0187dc4ac785ec0d6f336e 461 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 149 169 - T 20-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMC99_RS09905 76eed9678e0187dc4ac785ec0d6f336e 461 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 11 458 58.638 T 20-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AMC99_RS09905 76eed9678e0187dc4ac785ec0d6f336e 461 SUPERFAMILY SSF102114 141 380 5.23E-44 T 20-04-2016 AMC99_RS09905 76eed9678e0187dc4ac785ec0d6f336e 461 Pfam PF00919 Uncharacterized protein family UPF0004 12 103 1.5E-19 T 20-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AMC99_RS09905 76eed9678e0187dc4ac785ec0d6f336e 461 PANTHER PTHR11918:SF57 1 458 1.4E-202 T 20-04-2016 AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 PANTHER PTHR10906:SF2 13 454 6.7E-179 T 20-04-2016 AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 PANTHER PTHR10906 13 454 6.7E-179 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 Gene3D G3DSA:1.10.3370.10 13 448 4.0E-149 T 20-04-2016 IPR023201 SecY subunit domain AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 PIRSF PIRSF004557 5 452 4.1E-110 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 326 348 3.8E-86 T 20-04-2016 AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 186 209 3.8E-86 T 20-04-2016 AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 160 185 3.8E-86 T 20-04-2016 AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 120 143 3.8E-86 T 20-04-2016 AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 3.8E-86 T 20-04-2016 AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 278 297 3.8E-86 T 20-04-2016 AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 3.8E-86 T 20-04-2016 AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 413 431 3.8E-86 T 20-04-2016 AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 381 399 3.8E-86 T 20-04-2016 AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 SUPERFAMILY SSF103491 14 435 2.35E-124 T 20-04-2016 IPR023201 SecY subunit domain AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 444 27.79 T 20-04-2016 IPR026593 Protein translocase subunit SecY AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 439 2.9E-117 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 ProSitePatterns PS00756 Protein secY signature 2. 179 196 - T 20-04-2016 IPR030659 SecY conserved site AMC99_RS07440 a2d0c09d257642ec90173a1feedec6b2 454 Pfam PF00344 SecY translocase 80 428 7.7E-107 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMC99_RS03690 5ee28cd63ae330f47414fb3571c9ad2b 425 SUPERFAMILY SSF51905 138 244 3.8E-6 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03690 5ee28cd63ae330f47414fb3571c9ad2b 425 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 310 1.4E-15 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03690 5ee28cd63ae330f47414fb3571c9ad2b 425 Gene3D G3DSA:3.50.50.60 265 341 8.2E-33 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03690 5ee28cd63ae330f47414fb3571c9ad2b 425 Gene3D G3DSA:3.50.50.60 5 106 8.2E-33 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03690 5ee28cd63ae330f47414fb3571c9ad2b 425 PANTHER PTHR10632 1 425 1.7E-160 T 20-04-2016 AMC99_RS03690 5ee28cd63ae330f47414fb3571c9ad2b 425 SUPERFAMILY SSF51905 5 111 1.12E-24 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03690 5ee28cd63ae330f47414fb3571c9ad2b 425 SUPERFAMILY SSF51905 258 312 1.12E-24 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03690 5ee28cd63ae330f47414fb3571c9ad2b 425 Gene3D G3DSA:3.50.50.60 107 247 2.8E-5 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03690 5ee28cd63ae330f47414fb3571c9ad2b 425 PANTHER PTHR10632:SF7 1 425 1.7E-160 T 20-04-2016 AMC99_RS06625 03c22b58ac903061f67b8ea59aad4f86 267 PANTHER PTHR11941:SF39 1 264 3.1E-100 T 20-04-2016 AMC99_RS06625 03c22b58ac903061f67b8ea59aad4f86 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 20-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AMC99_RS06625 03c22b58ac903061f67b8ea59aad4f86 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 264 1.7E-55 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMC99_RS06625 03c22b58ac903061f67b8ea59aad4f86 267 PANTHER PTHR11941 1 264 3.1E-100 T 20-04-2016 AMC99_RS06625 03c22b58ac903061f67b8ea59aad4f86 267 Gene3D G3DSA:3.90.226.10 3 264 2.4E-75 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS06625 03c22b58ac903061f67b8ea59aad4f86 267 SUPERFAMILY SSF52096 3 266 2.7E-79 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS05450 08ea6ea0fdbb2544ffbecd886974155b 305 PANTHER PTHR10314 3 298 6.8E-121 T 20-04-2016 AMC99_RS05450 08ea6ea0fdbb2544ffbecd886974155b 305 Gene3D G3DSA:3.40.50.1100 132 299 3.4E-58 T 20-04-2016 AMC99_RS05450 08ea6ea0fdbb2544ffbecd886974155b 305 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 300 4.2E-109 T 20-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 AMC99_RS05450 08ea6ea0fdbb2544ffbecd886974155b 305 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 20-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AMC99_RS05450 08ea6ea0fdbb2544ffbecd886974155b 305 PANTHER PTHR10314:SF110 3 298 6.8E-121 T 20-04-2016 AMC99_RS05450 08ea6ea0fdbb2544ffbecd886974155b 305 SUPERFAMILY SSF53686 4 301 6.42E-85 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_RS05450 08ea6ea0fdbb2544ffbecd886974155b 305 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 300 3.7E-112 T 20-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 AMC99_RS05450 08ea6ea0fdbb2544ffbecd886974155b 305 Gene3D G3DSA:3.40.50.1100 35 131 1.5E-40 T 20-04-2016 AMC99_RS05450 08ea6ea0fdbb2544ffbecd886974155b 305 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 286 7.8E-61 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 Hamap MF_00006 Argininosuccinate lyase [argH]. 1 452 40.908 T 20-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 Pfam PF14698 Argininosuccinate lyase C-terminal 362 430 4.6E-22 T 20-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 PRINTS PR00149 Fumarate lyase superfamily signature 100 118 6.1E-29 T 20-04-2016 IPR000362 Fumarate lyase family AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 PRINTS PR00149 Fumarate lyase superfamily signature 273 289 6.1E-29 T 20-04-2016 IPR000362 Fumarate lyase family AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 PRINTS PR00149 Fumarate lyase superfamily signature 229 256 6.1E-29 T 20-04-2016 IPR000362 Fumarate lyase family AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 PRINTS PR00149 Fumarate lyase superfamily signature 145 163 6.1E-29 T 20-04-2016 IPR000362 Fumarate lyase family AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 ProSitePatterns PS00163 Fumarate lyases signature. 273 282 - T 20-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 SUPERFAMILY SSF48557 4 454 4.71E-146 T 20-04-2016 IPR008948 L-Aspartase-like GO:0003824 AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 Gene3D G3DSA:1.20.200.10 105 372 6.8E-101 T 20-04-2016 AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 PRINTS PR00145 Argininosuccinate lyase family signature 99 121 3.3E-65 T 20-04-2016 AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 PRINTS PR00145 Argininosuccinate lyase family signature 140 160 3.3E-65 T 20-04-2016 AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 PRINTS PR00145 Argininosuccinate lyase family signature 273 289 3.3E-65 T 20-04-2016 AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 PRINTS PR00145 Argininosuccinate lyase family signature 308 327 3.3E-65 T 20-04-2016 AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 PRINTS PR00145 Argininosuccinate lyase family signature 191 207 3.3E-65 T 20-04-2016 AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 PRINTS PR00145 Argininosuccinate lyase family signature 229 253 3.3E-65 T 20-04-2016 AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 PANTHER PTHR11444:SF3 1 454 7.0E-212 T 20-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 TIGRFAM TIGR00838 argH: argininosuccinate lyase 1 453 3.1E-174 T 20-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 Gene3D G3DSA:1.10.40.30 373 430 4.2E-27 T 20-04-2016 AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 PANTHER PTHR11444 1 454 7.0E-212 T 20-04-2016 IPR000362 Fumarate lyase family AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 Gene3D G3DSA:1.10.275.10 1 104 6.5E-35 T 20-04-2016 IPR024083 Fumarase/histidase, N-terminal AMC99_RS08765 94aa42438b02ea6abc64e5b9e1ac5be0 458 Pfam PF00206 Lyase 4 298 4.1E-73 T 20-04-2016 IPR022761 Fumarate lyase, N-terminal AMC99_RS10390 8949838eb3ab9f155ee013ded6a6928f 190 Gene3D G3DSA:3.60.20.10 16 190 3.1E-78 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS10390 8949838eb3ab9f155ee013ded6a6928f 190 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 16 189 2.4E-78 T 20-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMC99_RS10390 8949838eb3ab9f155ee013ded6a6928f 190 SUPERFAMILY SSF56235 12 190 8.55E-55 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS10390 8949838eb3ab9f155ee013ded6a6928f 190 Pfam PF00227 Proteasome subunit 14 190 3.1E-24 T 20-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 AMC99_RS10390 8949838eb3ab9f155ee013ded6a6928f 190 PANTHER PTHR32194 7 189 7.3E-110 T 20-04-2016 AMC99_RS10390 8949838eb3ab9f155ee013ded6a6928f 190 PIRSF PIRSF039093 10 190 1.3E-78 T 20-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMC99_RS10390 8949838eb3ab9f155ee013ded6a6928f 190 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 15 190 39.966 T 20-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMC99_RS11875 bb1c86398062e4066f795e13b39d4a46 429 SUPERFAMILY SSF51556 107 366 4.76E-9 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS11875 bb1c86398062e4066f795e13b39d4a46 429 Gene3D G3DSA:2.30.40.10 15 137 5.0E-10 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS11875 bb1c86398062e4066f795e13b39d4a46 429 SUPERFAMILY SSF51338 368 412 1.01E-13 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS11875 bb1c86398062e4066f795e13b39d4a46 429 SUPERFAMILY SSF51338 21 80 1.01E-13 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS11875 bb1c86398062e4066f795e13b39d4a46 429 Pfam PF07969 Amidohydrolase family 297 400 1.1E-12 T 20-04-2016 IPR013108 Amidohydrolase 3 AMC99_RS11875 bb1c86398062e4066f795e13b39d4a46 429 Gene3D G3DSA:2.30.40.10 301 400 8.4E-18 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS06520 60b493c220c4009d04f9a9c5855b4755 326 Pfam PF07859 alpha/beta hydrolase fold 96 299 4.8E-56 T 20-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AMC99_RS06520 60b493c220c4009d04f9a9c5855b4755 326 Gene3D G3DSA:3.40.50.1820 18 323 9.1E-74 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS06520 60b493c220c4009d04f9a9c5855b4755 326 SUPERFAMILY SSF53474 52 324 3.14E-54 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS06520 60b493c220c4009d04f9a9c5855b4755 326 PANTHER PTHR23024:SF24 74 323 1.1E-60 T 20-04-2016 AMC99_RS06520 60b493c220c4009d04f9a9c5855b4755 326 PANTHER PTHR23024 74 323 1.1E-60 T 20-04-2016 AMC99_RS09605 f9dba4f37b40eec5956c0fbd64ef0dd4 234 Pfam PF07542 ATP12 chaperone protein 2 119 7.5E-31 T 20-04-2016 IPR011419 ATP12, ATPase F1F0-assembly protein GO:0043461 AMC99_RS09605 f9dba4f37b40eec5956c0fbd64ef0dd4 234 SUPERFAMILY SSF160909 2 227 7.19E-69 T 20-04-2016 AMC99_RS09605 f9dba4f37b40eec5956c0fbd64ef0dd4 234 Gene3D G3DSA:1.10.3580.10 68 227 5.7E-47 T 20-04-2016 IPR023335 Orthogonal Bundle domain in ATP12 AMC99_RS09605 f9dba4f37b40eec5956c0fbd64ef0dd4 234 PANTHER PTHR21013 1 205 6.5E-53 T 20-04-2016 IPR011419 ATP12, ATPase F1F0-assembly protein GO:0043461 AMC99_RS09605 f9dba4f37b40eec5956c0fbd64ef0dd4 234 Gene3D G3DSA:3.30.2180.10 2 58 1.4E-19 T 20-04-2016 AMC99_RS09305 48fb7094c1b788dfd63c52dd5c1b21b4 300 SUPERFAMILY SSF48179 172 296 4.76E-40 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMC99_RS09305 48fb7094c1b788dfd63c52dd5c1b21b4 300 PIRSF PIRSF000103 1 299 8.8E-72 T 20-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 AMC99_RS09305 48fb7094c1b788dfd63c52dd5c1b21b4 300 PANTHER PTHR22981 8 294 6.4E-134 T 20-04-2016 AMC99_RS09305 48fb7094c1b788dfd63c52dd5c1b21b4 300 PANTHER PTHR22981:SF49 8 294 6.4E-134 T 20-04-2016 AMC99_RS09305 48fb7094c1b788dfd63c52dd5c1b21b4 300 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 174 292 6.3E-34 T 20-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AMC99_RS09305 48fb7094c1b788dfd63c52dd5c1b21b4 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 171 1.3E-46 T 20-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AMC99_RS09305 48fb7094c1b788dfd63c52dd5c1b21b4 300 Gene3D G3DSA:1.10.1040.10 174 294 4.9E-41 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMC99_RS09305 48fb7094c1b788dfd63c52dd5c1b21b4 300 Gene3D G3DSA:3.40.50.720 6 172 2.1E-51 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09305 48fb7094c1b788dfd63c52dd5c1b21b4 300 SUPERFAMILY SSF51735 6 172 1.0E-49 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06000 4a5c765633ee025442d519559fb32a99 726 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 290 482 6.9E-21 T 20-04-2016 IPR004477 ComEC/Rec2-related protein AMC99_RS06000 4a5c765633ee025442d519559fb32a99 726 Pfam PF13567 Domain of unknown function (DUF4131) 60 225 3.8E-13 T 20-04-2016 IPR025405 Domain of unknown function DUF4131 AMC99_RS06000 4a5c765633ee025442d519559fb32a99 726 PANTHER PTHR30619 51 572 1.5E-56 T 20-04-2016 AMC99_RS06000 4a5c765633ee025442d519559fb32a99 726 PANTHER PTHR30619:SF2 51 572 1.5E-56 T 20-04-2016 AMC99_RS06000 4a5c765633ee025442d519559fb32a99 726 Pfam PF03772 Competence protein 270 551 1.6E-55 T 20-04-2016 IPR004477 ComEC/Rec2-related protein AMC99_RS12215 a4056ff4449331f72a8491de8ee2578a 600 Gene3D G3DSA:2.30.38.10 396 461 5.5E-19 T 20-04-2016 AMC99_RS12215 a4056ff4449331f72a8491de8ee2578a 600 Pfam PF00501 AMP-binding enzyme 17 469 4.1E-97 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMC99_RS12215 a4056ff4449331f72a8491de8ee2578a 600 PANTHER PTHR24096:SF193 3 599 1.1E-173 T 20-04-2016 AMC99_RS12215 a4056ff4449331f72a8491de8ee2578a 600 PANTHER PTHR24096 3 599 1.1E-173 T 20-04-2016 AMC99_RS12215 a4056ff4449331f72a8491de8ee2578a 600 Gene3D G3DSA:3.40.50.980 194 289 1.6E-28 T 20-04-2016 AMC99_RS12215 a4056ff4449331f72a8491de8ee2578a 600 Gene3D G3DSA:3.40.50.980 337 395 1.6E-28 T 20-04-2016 AMC99_RS12215 a4056ff4449331f72a8491de8ee2578a 600 SUPERFAMILY SSF56801 8 294 1.13E-121 T 20-04-2016 AMC99_RS12215 a4056ff4449331f72a8491de8ee2578a 600 SUPERFAMILY SSF56801 340 598 1.13E-121 T 20-04-2016 AMC99_RS12215 a4056ff4449331f72a8491de8ee2578a 600 Gene3D G3DSA:3.30.300.30 467 590 8.0E-7 T 20-04-2016 AMC99_RS12215 a4056ff4449331f72a8491de8ee2578a 600 Gene3D G3DSA:3.40.50.980 10 193 1.8E-31 T 20-04-2016 AMC99_RS11650 2c5735eb6f11ebc0cfa47324503f66a5 342 SUPERFAMILY SSF48019 215 335 5.27E-11 T 20-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 AMC99_RS11650 2c5735eb6f11ebc0cfa47324503f66a5 342 Gene3D G3DSA:1.20.272.20 223 322 6.5E-6 T 20-04-2016 AMC99_RS11650 2c5735eb6f11ebc0cfa47324503f66a5 342 Gene3D G3DSA:1.10.8.60 145 222 3.6E-5 T 20-04-2016 AMC99_RS11650 2c5735eb6f11ebc0cfa47324503f66a5 342 PANTHER PTHR34388 1 313 1.9E-15 T 20-04-2016 AMC99_RS11650 2c5735eb6f11ebc0cfa47324503f66a5 342 SUPERFAMILY SSF52540 15 190 7.73E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10980 352deabdc29897f1ff7da1d78c519207 371 Pfam PF00155 Aminotransferase class I and II 34 361 1.5E-52 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMC99_RS10980 352deabdc29897f1ff7da1d78c519207 371 PANTHER PTHR11751:SF347 10 367 2.1E-82 T 20-04-2016 AMC99_RS10980 352deabdc29897f1ff7da1d78c519207 371 SUPERFAMILY SSF53383 29 365 1.2E-76 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS10980 352deabdc29897f1ff7da1d78c519207 371 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 11 367 54.114 T 20-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 AMC99_RS10980 352deabdc29897f1ff7da1d78c519207 371 Gene3D G3DSA:3.40.640.10 64 253 4.6E-59 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS10980 352deabdc29897f1ff7da1d78c519207 371 Gene3D G3DSA:3.90.1150.10 254 366 1.7E-23 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS10980 352deabdc29897f1ff7da1d78c519207 371 PANTHER PTHR11751 10 367 2.1E-82 T 20-04-2016 AMC99_RS10980 352deabdc29897f1ff7da1d78c519207 371 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 16 365 2.6E-85 T 20-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 AMC99_RS10065 7abc7872cf8ccc94cd001b0e9025e07f 190 Pfam PF01799 [2Fe-2S] binding domain 72 142 3.1E-27 T 20-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMC99_RS10065 7abc7872cf8ccc94cd001b0e9025e07f 190 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 20-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMC99_RS10065 7abc7872cf8ccc94cd001b0e9025e07f 190 Gene3D G3DSA:3.10.20.30 3 73 9.6E-29 T 20-04-2016 IPR012675 Beta-grasp domain AMC99_RS10065 7abc7872cf8ccc94cd001b0e9025e07f 190 SUPERFAMILY SSF47741 72 150 7.46E-29 T 20-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMC99_RS10065 7abc7872cf8ccc94cd001b0e9025e07f 190 SUPERFAMILY SSF54292 3 77 8.65E-24 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMC99_RS10065 7abc7872cf8ccc94cd001b0e9025e07f 190 Gene3D G3DSA:1.10.150.120 74 152 5.4E-31 T 20-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMC99_RS10065 7abc7872cf8ccc94cd001b0e9025e07f 190 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 60 1.1E-8 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMC99_RS10065 7abc7872cf8ccc94cd001b0e9025e07f 190 PANTHER PTHR11908 3 132 1.4E-42 T 20-04-2016 AMC99_RS07075 1f7a3f061628da3c657ea0aa467b0bd3 183 PANTHER PTHR18895 1 180 1.4E-29 T 20-04-2016 AMC99_RS07075 1f7a3f061628da3c657ea0aa467b0bd3 183 Gene3D G3DSA:3.40.50.150 1 180 1.2E-52 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS07075 1f7a3f061628da3c657ea0aa467b0bd3 183 SUPERFAMILY SSF53335 1 177 1.08E-40 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS07075 1f7a3f061628da3c657ea0aa467b0bd3 183 PIRSF PIRSF004553 1 181 1.5E-52 T 20-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS07075 1f7a3f061628da3c657ea0aa467b0bd3 183 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMC99_RS07075 1f7a3f061628da3c657ea0aa467b0bd3 183 Pfam PF03602 Conserved hypothetical protein 95 1 177 1.4E-47 T 20-04-2016 AMC99_RS07075 1f7a3f061628da3c657ea0aa467b0bd3 183 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 178 2.3E-46 T 20-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS07075 1f7a3f061628da3c657ea0aa467b0bd3 183 PANTHER PTHR18895:SF60 1 180 1.4E-29 T 20-04-2016 AMC99_RS07135 345c00d0c4ad176056db6d5ab96a77df 490 PANTHER PTHR11819 2 484 2.6E-175 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMC99_RS07135 345c00d0c4ad176056db6d5ab96a77df 490 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 5 484 2.3E-186 T 20-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AMC99_RS07135 345c00d0c4ad176056db6d5ab96a77df 490 PANTHER PTHR11819:SF148 2 484 2.6E-175 T 20-04-2016 AMC99_RS07135 345c00d0c4ad176056db6d5ab96a77df 490 Pfam PF00474 Sodium:solute symporter family 34 438 2.9E-94 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMC99_RS07135 345c00d0c4ad176056db6d5ab96a77df 490 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 420 440 - T 20-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AMC99_RS07135 345c00d0c4ad176056db6d5ab96a77df 490 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 438 3.5E-85 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMC99_RS08415 abd34c50d8f0cf3253be2bd2055206c3 82 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 74 5.0E-25 T 20-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS08415 abd34c50d8f0cf3253be2bd2055206c3 82 PANTHER PTHR34696 1 81 4.8E-26 T 20-04-2016 AMC99_RS08415 abd34c50d8f0cf3253be2bd2055206c3 82 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 74 1.8E-26 T 20-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS08415 abd34c50d8f0cf3253be2bd2055206c3 82 Gene3D G3DSA:3.30.1280.10 1 74 2.5E-30 T 20-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS08415 abd34c50d8f0cf3253be2bd2055206c3 82 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 75 20.979 T 20-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS08415 abd34c50d8f0cf3253be2bd2055206c3 82 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 74 3.6E-28 T 20-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS08415 abd34c50d8f0cf3253be2bd2055206c3 82 SUPERFAMILY SSF82697 1 74 1.92E-25 T 20-04-2016 AMC99_RS10755 143c0eb76887f77e1aff6de3aff28371 190 Pfam PF02631 RecX family 59 172 2.4E-18 T 20-04-2016 IPR003783 Regulatory protein RecX GO:0006282 AMC99_RS10755 143c0eb76887f77e1aff6de3aff28371 190 Gene3D G3DSA:1.10.10.10 77 114 4.6E-7 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS05115 58f7b7f7fc0224d5e4c53fc0413987a8 88 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 17 57 3.0E-11 T 20-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMC99_RS05115 58f7b7f7fc0224d5e4c53fc0413987a8 88 SUPERFAMILY SSF116842 11 76 7.32E-22 T 20-04-2016 AMC99_RS05115 58f7b7f7fc0224d5e4c53fc0413987a8 88 PANTHER PTHR34137 5 87 1.2E-21 T 20-04-2016 AMC99_RS05115 58f7b7f7fc0224d5e4c53fc0413987a8 88 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 17 77 16.031 T 20-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMC99_RS05115 58f7b7f7fc0224d5e4c53fc0413987a8 88 Pfam PF02609 Exonuclease VII small subunit 18 68 8.4E-22 T 20-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMC99_RS05115 58f7b7f7fc0224d5e4c53fc0413987a8 88 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 17 72 6.7E-25 T 20-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMC99_RS05115 58f7b7f7fc0224d5e4c53fc0413987a8 88 Gene3D G3DSA:1.10.287.1040 12 77 8.4E-27 T 20-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMC99_RS11570 556fa2cc3e5948a154b1e1f38a74f54f 393 SUPERFAMILY SSF53901 1 267 2.8E-65 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS11570 556fa2cc3e5948a154b1e1f38a74f54f 393 Pfam PF00108 Thiolase, N-terminal domain 6 262 1.5E-63 T 20-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AMC99_RS11570 556fa2cc3e5948a154b1e1f38a74f54f 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 20-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AMC99_RS11570 556fa2cc3e5948a154b1e1f38a74f54f 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 1.5E-42 T 20-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AMC99_RS11570 556fa2cc3e5948a154b1e1f38a74f54f 393 Gene3D G3DSA:3.40.47.10 277 392 1.9E-62 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS11570 556fa2cc3e5948a154b1e1f38a74f54f 393 Gene3D G3DSA:3.40.47.10 145 184 1.9E-62 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS11570 556fa2cc3e5948a154b1e1f38a74f54f 393 PANTHER PTHR18919 1 393 1.2E-209 T 20-04-2016 AMC99_RS11570 556fa2cc3e5948a154b1e1f38a74f54f 393 SUPERFAMILY SSF53901 271 392 1.19E-40 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS11570 556fa2cc3e5948a154b1e1f38a74f54f 393 PANTHER PTHR18919:SF14 1 393 1.2E-209 T 20-04-2016 AMC99_RS11570 556fa2cc3e5948a154b1e1f38a74f54f 393 Gene3D G3DSA:3.40.47.10 185 275 6.3E-57 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS11570 556fa2cc3e5948a154b1e1f38a74f54f 393 Gene3D G3DSA:3.40.47.10 4 126 6.3E-57 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS11570 556fa2cc3e5948a154b1e1f38a74f54f 393 PIRSF PIRSF000429 1 393 4.3E-113 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMC99_RS11570 556fa2cc3e5948a154b1e1f38a74f54f 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 391 2.5E-120 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMC99_RS01145 5e78b5c385a7d82c076ef7015fccf7ed 237 PANTHER PTHR11085 1 235 5.6E-78 T 20-04-2016 IPR003000 Sirtuin family GO:0070403 AMC99_RS01145 5e78b5c385a7d82c076ef7015fccf7ed 237 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 5 237 55.462 T 20-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 AMC99_RS01145 5e78b5c385a7d82c076ef7015fccf7ed 237 SUPERFAMILY SSF52467 3 235 5.82E-76 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMC99_RS01145 5e78b5c385a7d82c076ef7015fccf7ed 237 Gene3D G3DSA:3.40.50.1220 166 232 7.2E-39 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMC99_RS01145 5e78b5c385a7d82c076ef7015fccf7ed 237 Gene3D G3DSA:3.40.50.1220 68 110 7.2E-39 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMC99_RS01145 5e78b5c385a7d82c076ef7015fccf7ed 237 Gene3D G3DSA:3.40.50.1220 3 20 7.2E-39 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMC99_RS01145 5e78b5c385a7d82c076ef7015fccf7ed 237 Gene3D G3DSA:3.30.1600.10 111 159 3.9E-24 T 20-04-2016 IPR026591 Sirtuin family, catalytic core small domain AMC99_RS01145 5e78b5c385a7d82c076ef7015fccf7ed 237 Gene3D G3DSA:3.30.1600.10 21 60 3.9E-24 T 20-04-2016 IPR026591 Sirtuin family, catalytic core small domain AMC99_RS01145 5e78b5c385a7d82c076ef7015fccf7ed 237 Pfam PF02146 Sir2 family 12 187 1.6E-47 T 20-04-2016 IPR003000 Sirtuin family GO:0070403 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 Pfam PF00140 Sigma-70 factor, region 1.2 1 25 4.9E-7 T 20-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 SUPERFAMILY SSF88659 174 269 4.3E-21 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 Pfam PF04545 Sigma-70, region 4 214 265 1.0E-16 T 20-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 PRINTS PR00046 Major sigma-70 factor signature 252 263 2.2E-22 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 PRINTS PR00046 Major sigma-70 factor signature 218 230 2.2E-22 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 PRINTS PR00046 Major sigma-70 factor signature 237 252 2.2E-22 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 PRINTS PR00046 Major sigma-70 factor signature 58 71 2.2E-22 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 PRINTS PR00046 Major sigma-70 factor signature 82 90 2.2E-22 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 Gene3D G3DSA:1.10.10.10 209 269 3.8E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 Pfam PF04542 Sigma-70 region 2 34 102 5.5E-16 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 237 263 - T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 1 269 48.143 T 20-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 58 71 - T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 PIRSF PIRSF000770 1 276 1.0E-37 T 20-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 PANTHER PTHR30376 3 271 8.2E-93 T 20-04-2016 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 SUPERFAMILY SSF88946 1 102 2.35E-37 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 267 9.5E-32 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 Gene3D G3DSA:1.10.601.10 1 100 1.8E-37 T 20-04-2016 AMC99_RS09725 880283461ead320571d3d96ba9fe7514 280 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 2 268 4.9E-108 T 20-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AMC99_RS07085 73ec23303df60a15eab39b733b64e86e 768 PANTHER PTHR11070 8 654 5.7E-205 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMC99_RS07085 73ec23303df60a15eab39b733b64e86e 768 SUPERFAMILY SSF52540 16 649 2.28E-176 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07085 73ec23303df60a15eab39b733b64e86e 768 Gene3D G3DSA:1.10.10.160 127 205 2.1E-21 T 20-04-2016 IPR013986 DExx box DNA helicase domain AMC99_RS07085 73ec23303df60a15eab39b733b64e86e 768 Gene3D G3DSA:3.40.50.300 301 402 2.1E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07085 73ec23303df60a15eab39b733b64e86e 768 Gene3D G3DSA:3.40.50.300 557 649 2.1E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07085 73ec23303df60a15eab39b733b64e86e 768 Pfam PF13361 UvrD-like helicase C-terminal domain 292 619 6.8E-65 T 20-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMC99_RS07085 73ec23303df60a15eab39b733b64e86e 768 PANTHER PTHR11070:SF7 8 654 5.7E-205 T 20-04-2016 AMC99_RS07085 73ec23303df60a15eab39b733b64e86e 768 Gene3D G3DSA:3.40.50.300 206 300 7.6E-71 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07085 73ec23303df60a15eab39b733b64e86e 768 Gene3D G3DSA:3.40.50.300 17 123 7.6E-71 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07085 73ec23303df60a15eab39b733b64e86e 768 Gene3D G3DSA:1.10.486.10 403 547 1.2E-47 T 20-04-2016 AMC99_RS07085 73ec23303df60a15eab39b733b64e86e 768 Pfam PF00580 UvrD/REP helicase N-terminal domain 22 287 1.4E-77 T 20-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AMC99_RS00255 b6549990671f0ece53e48ef749fd9b35 971 SUPERFAMILY SSF55464 1 296 8.24E-82 T 20-04-2016 AMC99_RS00255 b6549990671f0ece53e48ef749fd9b35 971 SUPERFAMILY SSF52540 451 598 1.02E-17 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00255 b6549990671f0ece53e48ef749fd9b35 971 Pfam PF08751 TrwC relaxase 12 277 7.1E-74 T 20-04-2016 IPR014862 TrwC relaxase AMC99_RS00255 b6549990671f0ece53e48ef749fd9b35 971 SUPERFAMILY SSF52540 794 911 7.17E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00255 b6549990671f0ece53e48ef749fd9b35 971 SUPERFAMILY SSF52540 584 638 7.17E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00255 b6549990671f0ece53e48ef749fd9b35 971 SUPERFAMILY SSF52540 673 705 7.17E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00255 b6549990671f0ece53e48ef749fd9b35 971 Pfam PF13604 AAA domain 455 648 4.2E-42 T 20-04-2016 AMC99_RS00255 b6549990671f0ece53e48ef749fd9b35 971 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 281 5.1E-74 T 20-04-2016 IPR014059 Conjugative relaxase, N-terminal AMC99_RS00255 b6549990671f0ece53e48ef749fd9b35 971 Gene3D G3DSA:3.40.50.300 448 643 6.5E-23 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11325 eb00f9a0deccc8f80cd26f708b38ffb3 512 SUPERFAMILY SSF161098 15 203 5.23E-29 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMC99_RS11325 eb00f9a0deccc8f80cd26f708b38ffb3 512 SUPERFAMILY SSF53850 248 507 1.01E-52 T 20-04-2016 AMC99_RS11325 eb00f9a0deccc8f80cd26f708b38ffb3 512 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 248 507 6.9E-43 T 20-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AMC99_RS11325 eb00f9a0deccc8f80cd26f708b38ffb3 512 Gene3D G3DSA:3.40.190.120 356 450 1.2E-26 T 20-04-2016 AMC99_RS11325 eb00f9a0deccc8f80cd26f708b38ffb3 512 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 211 5.1E-17 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMC99_RS11325 eb00f9a0deccc8f80cd26f708b38ffb3 512 PANTHER PTHR30177:SF4 1 210 5.1E-130 T 20-04-2016 AMC99_RS11325 eb00f9a0deccc8f80cd26f708b38ffb3 512 PANTHER PTHR30177:SF4 278 512 5.1E-130 T 20-04-2016 AMC99_RS11325 eb00f9a0deccc8f80cd26f708b38ffb3 512 Gene3D G3DSA:1.10.3720.10 15 200 4.6E-23 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMC99_RS11325 eb00f9a0deccc8f80cd26f708b38ffb3 512 Gene3D G3DSA:3.40.190.10 246 355 7.2E-28 T 20-04-2016 AMC99_RS11325 eb00f9a0deccc8f80cd26f708b38ffb3 512 PANTHER PTHR30177 1 210 5.1E-130 T 20-04-2016 AMC99_RS11325 eb00f9a0deccc8f80cd26f708b38ffb3 512 PANTHER PTHR30177 278 512 5.1E-130 T 20-04-2016 AMC99_RS12355 6da79477fc64a93e69f1bff1e0123a3d 157 Pfam PF03061 Thioesterase superfamily 58 131 3.4E-11 T 20-04-2016 IPR006683 Thioesterase domain AMC99_RS12355 6da79477fc64a93e69f1bff1e0123a3d 157 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 37 140 3.9E-13 T 20-04-2016 IPR003736 Phenylacetic acid degradation-related domain AMC99_RS12355 6da79477fc64a93e69f1bff1e0123a3d 157 SUPERFAMILY SSF54637 19 143 9.35E-24 T 20-04-2016 IPR029069 HotDog domain AMC99_RS12355 6da79477fc64a93e69f1bff1e0123a3d 157 Gene3D G3DSA:3.10.129.10 18 141 2.9E-22 T 20-04-2016 IPR029069 HotDog domain AMC99_RS10740 ac04891e5844d679d1f92488f40f2c41 166 Pfam PF09923 Uncharacterized protein conserved in bacteria (DUF2155) 65 158 3.1E-27 T 20-04-2016 IPR019225 Protein of unknown function DUF2155 AMC99_RS09225 cf4992ab74880092f016abf73ba00074 462 SUPERFAMILY SSF53187 143 458 6.91E-99 T 20-04-2016 AMC99_RS09225 cf4992ab74880092f016abf73ba00074 462 PRINTS PR00481 Cytosol aminopeptidase signature 223 240 5.0E-44 T 20-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_RS09225 cf4992ab74880092f016abf73ba00074 462 PRINTS PR00481 Cytosol aminopeptidase signature 304 324 5.0E-44 T 20-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_RS09225 cf4992ab74880092f016abf73ba00074 462 PRINTS PR00481 Cytosol aminopeptidase signature 245 266 5.0E-44 T 20-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_RS09225 cf4992ab74880092f016abf73ba00074 462 PRINTS PR00481 Cytosol aminopeptidase signature 332 347 5.0E-44 T 20-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_RS09225 cf4992ab74880092f016abf73ba00074 462 PRINTS PR00481 Cytosol aminopeptidase signature 282 303 5.0E-44 T 20-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_RS09225 cf4992ab74880092f016abf73ba00074 462 PANTHER PTHR11963:SF13 93 460 5.4E-130 T 20-04-2016 AMC99_RS09225 cf4992ab74880092f016abf73ba00074 462 Gene3D G3DSA:3.40.630.10 137 458 3.2E-109 T 20-04-2016 AMC99_RS09225 cf4992ab74880092f016abf73ba00074 462 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 308 315 - T 20-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMC99_RS09225 cf4992ab74880092f016abf73ba00074 462 PANTHER PTHR11963 93 460 5.4E-130 T 20-04-2016 AMC99_RS09225 cf4992ab74880092f016abf73ba00074 462 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 148 447 6.2E-95 T 20-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMC99_RS03890 fdb6d64de69b88bf5cdc56ab216f8de2 360 SUPERFAMILY SSF51735 137 303 7.31E-47 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS03890 fdb6d64de69b88bf5cdc56ab216f8de2 360 SMART SM01002 149 297 7.0E-87 T 20-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMC99_RS03890 fdb6d64de69b88bf5cdc56ab216f8de2 360 Gene3D G3DSA:3.40.50.1770 202 354 2.1E-25 T 20-04-2016 AMC99_RS03890 fdb6d64de69b88bf5cdc56ab216f8de2 360 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 5.0E-43 T 20-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMC99_RS03890 fdb6d64de69b88bf5cdc56ab216f8de2 360 SMART SM01003 4 137 4.3E-74 T 20-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMC99_RS03890 fdb6d64de69b88bf5cdc56ab216f8de2 360 PIRSF PIRSF000183 1 360 3.4E-147 T 20-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 AMC99_RS03890 fdb6d64de69b88bf5cdc56ab216f8de2 360 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 351 4.0E-82 T 20-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMC99_RS03890 fdb6d64de69b88bf5cdc56ab216f8de2 360 PANTHER PTHR10160 1 360 1.1E-193 T 20-04-2016 AMC99_RS03890 fdb6d64de69b88bf5cdc56ab216f8de2 360 Gene3D G3DSA:3.50.50.60 173 201 2.5E-6 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03890 fdb6d64de69b88bf5cdc56ab216f8de2 360 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 20-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 AMC99_RS03890 fdb6d64de69b88bf5cdc56ab216f8de2 360 Gene3D G3DSA:3.40.50.1770 1 172 3.3E-55 T 20-04-2016 AMC99_RS03890 fdb6d64de69b88bf5cdc56ab216f8de2 360 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 359 6.6E-149 T 20-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 AMC99_RS03890 fdb6d64de69b88bf5cdc56ab216f8de2 360 SUPERFAMILY SSF52283 305 359 2.21E-64 T 20-04-2016 AMC99_RS03890 fdb6d64de69b88bf5cdc56ab216f8de2 360 SUPERFAMILY SSF52283 1 137 2.21E-64 T 20-04-2016 AMC99_RS00005 17ff665d05b3d51d2317e9ba06e83093 200 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 199 3.9E-78 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like AMC99_RS00005 17ff665d05b3d51d2317e9ba06e83093 200 Gene3D G3DSA:1.10.10.200 1 80 9.5E-36 T 20-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like AMC99_RS00005 17ff665d05b3d51d2317e9ba06e83093 200 PANTHER PTHR12532 1 188 1.1E-88 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like AMC99_RS00005 17ff665d05b3d51d2317e9ba06e83093 200 Gene3D G3DSA:3.30.1270.10 82 176 3.0E-37 T 20-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 AMC99_RS00005 17ff665d05b3d51d2317e9ba06e83093 200 Pfam PF01709 Transcriptional regulator 5 200 2.6E-77 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like AMC99_RS00005 17ff665d05b3d51d2317e9ba06e83093 200 SUPERFAMILY SSF75625 3 200 1.44E-75 T 20-04-2016 IPR029072 YebC-like AMC99_RS00005 17ff665d05b3d51d2317e9ba06e83093 200 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 198 24.784 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like AMC99_RS05215 71c44e9b6200fdfe1d2d589865075ecb 629 SUPERFAMILY SSF57783 2 99 2.55E-33 T 20-04-2016 AMC99_RS05215 71c44e9b6200fdfe1d2d589865075ecb 629 SMART SM00493 255 326 5.5E-16 T 20-04-2016 IPR006171 Toprim domain AMC99_RS05215 71c44e9b6200fdfe1d2d589865075ecb 629 SMART SM00400 34 88 3.5E-29 T 20-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMC99_RS05215 71c44e9b6200fdfe1d2d589865075ecb 629 Pfam PF08275 DNA primase catalytic core, N-terminal domain 122 247 3.8E-36 T 20-04-2016 IPR013264 DNA primase, catalytic core, N-terminal AMC99_RS05215 71c44e9b6200fdfe1d2d589865075ecb 629 Pfam PF13662 Toprim domain 256 320 8.4E-17 T 20-04-2016 IPR006171 Toprim domain AMC99_RS05215 71c44e9b6200fdfe1d2d589865075ecb 629 SUPERFAMILY SSF56731 112 417 6.15E-97 T 20-04-2016 AMC99_RS05215 71c44e9b6200fdfe1d2d589865075ecb 629 Gene3D G3DSA:3.90.580.10 3 99 1.2E-35 T 20-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMC99_RS05215 71c44e9b6200fdfe1d2d589865075ecb 629 PANTHER PTHR30313 1 418 6.2E-132 T 20-04-2016 AMC99_RS05215 71c44e9b6200fdfe1d2d589865075ecb 629 Pfam PF01807 CHC2 zinc finger 5 96 7.6E-33 T 20-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMC99_RS05215 71c44e9b6200fdfe1d2d589865075ecb 629 Gene3D G3DSA:3.40.1360.10 237 360 1.1E-47 T 20-04-2016 AMC99_RS05215 71c44e9b6200fdfe1d2d589865075ecb 629 TIGRFAM TIGR01391 dnaG: DNA primase 5 415 2.6E-130 T 20-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AMC99_RS05215 71c44e9b6200fdfe1d2d589865075ecb 629 Gene3D G3DSA:3.90.980.10 112 236 1.8E-35 T 20-04-2016 IPR013264 DNA primase, catalytic core, N-terminal AMC99_RS05215 71c44e9b6200fdfe1d2d589865075ecb 629 Hamap MF_00974 DNA primase [dnaG]. 2 589 25.485 T 20-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMC99_RS13655 9342cdcb46c9f340a45253d673f85d69 125 Gene3D G3DSA:3.30.1390.10 53 125 1.2E-31 T 20-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMC99_RS13655 9342cdcb46c9f340a45253d673f85d69 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 6.3E-45 T 20-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS13655 9342cdcb46c9f340a45253d673f85d69 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 125 1.0E-16 T 20-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 AMC99_RS13655 9342cdcb46c9f340a45253d673f85d69 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 125 7.7E-29 T 20-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 AMC99_RS13655 9342cdcb46c9f340a45253d673f85d69 125 SUPERFAMILY SSF54736 54 125 4.88E-24 T 20-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMC99_RS13655 9342cdcb46c9f340a45253d673f85d69 125 SUPERFAMILY SSF48300 3 61 2.22E-15 T 20-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS13655 9342cdcb46c9f340a45253d673f85d69 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 125 23.553 T 20-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS13655 9342cdcb46c9f340a45253d673f85d69 125 Gene3D G3DSA:1.20.5.710 6 51 3.8E-15 T 20-04-2016 AMC99_RS13655 9342cdcb46c9f340a45253d673f85d69 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 1.1E-16 T 20-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS09105 08fa721d9a864942101547f14e5d43d6 477 Gene3D G3DSA:3.40.1190.10 97 319 4.6E-82 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09105 08fa721d9a864942101547f14e5d43d6 477 SUPERFAMILY SSF53623 94 316 5.49E-70 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09105 08fa721d9a864942101547f14e5d43d6 477 SUPERFAMILY SSF51984 11 95 8.76E-27 T 20-04-2016 AMC99_RS09105 08fa721d9a864942101547f14e5d43d6 477 PANTHER PTHR23135 4 461 1.6E-191 T 20-04-2016 AMC99_RS09105 08fa721d9a864942101547f14e5d43d6 477 Pfam PF01225 Mur ligase family, catalytic domain 11 107 1.4E-26 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09105 08fa721d9a864942101547f14e5d43d6 477 Gene3D G3DSA:3.90.190.20 320 471 5.1E-51 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS09105 08fa721d9a864942101547f14e5d43d6 477 Pfam PF08245 Mur ligase middle domain 113 297 2.4E-30 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09105 08fa721d9a864942101547f14e5d43d6 477 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 411 2.3E-17 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS09105 08fa721d9a864942101547f14e5d43d6 477 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 11 467 1.2E-155 T 20-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09105 08fa721d9a864942101547f14e5d43d6 477 SUPERFAMILY SSF53244 317 470 2.2E-45 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS09105 08fa721d9a864942101547f14e5d43d6 477 PANTHER PTHR23135:SF5 4 461 1.6E-191 T 20-04-2016 AMC99_RS09105 08fa721d9a864942101547f14e5d43d6 477 Gene3D G3DSA:3.40.50.720 11 96 6.7E-35 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09105 08fa721d9a864942101547f14e5d43d6 477 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 8 473 41.257 T 20-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS01435 cc3650e8dd5e62f012b52431bc0d13c9 297 SUPERFAMILY SSF55021 200 291 3.79E-20 T 20-04-2016 AMC99_RS01435 cc3650e8dd5e62f012b52431bc0d13c9 297 SUPERFAMILY SSF53850 27 201 1.41E-50 T 20-04-2016 AMC99_RS01435 cc3650e8dd5e62f012b52431bc0d13c9 297 Gene3D G3DSA:3.30.70.260 210 293 1.2E-22 T 20-04-2016 AMC99_RS01435 cc3650e8dd5e62f012b52431bc0d13c9 297 PIRSF PIRSF001500 11 294 1.1E-55 T 20-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 AMC99_RS01435 cc3650e8dd5e62f012b52431bc0d13c9 297 Gene3D G3DSA:3.40.190.10 118 186 8.3E-22 T 20-04-2016 AMC99_RS01435 cc3650e8dd5e62f012b52431bc0d13c9 297 PANTHER PTHR21022 27 290 8.3E-81 T 20-04-2016 AMC99_RS01435 cc3650e8dd5e62f012b52431bc0d13c9 297 Gene3D G3DSA:3.40.190.10 25 112 6.0E-24 T 20-04-2016 AMC99_RS01435 cc3650e8dd5e62f012b52431bc0d13c9 297 Pfam PF00800 Prephenate dehydratase 27 200 1.2E-47 T 20-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 AMC99_RS01435 cc3650e8dd5e62f012b52431bc0d13c9 297 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 174 196 - T 20-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 AMC99_RS10150 fded271dbf8da4704cb38ca84677b70a 409 PANTHER PTHR11712 19 409 2.2E-85 T 20-04-2016 AMC99_RS10150 fded271dbf8da4704cb38ca84677b70a 409 Gene3D G3DSA:1.10.630.10 11 409 1.2E-110 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS10150 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 140 156 3.7E-44 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS10150 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 203 225 3.7E-44 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS10150 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 360 371 3.7E-44 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS10150 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 94 105 3.7E-44 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS10150 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 351 360 3.7E-44 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS10150 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 302 329 3.7E-44 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS10150 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 330 345 3.7E-44 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS10150 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 285 296 3.7E-44 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS10150 fded271dbf8da4704cb38ca84677b70a 409 Pfam PF00067 Cytochrome P450 286 377 7.5E-14 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS10150 fded271dbf8da4704cb38ca84677b70a 409 Pfam PF00067 Cytochrome P450 78 275 7.4E-10 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS10150 fded271dbf8da4704cb38ca84677b70a 409 SUPERFAMILY SSF48264 16 409 1.57E-87 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS10150 fded271dbf8da4704cb38ca84677b70a 409 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 353 362 - T 20-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 AMC99_RS06855 850596afdbe1e6e9d519c06558a1c1d3 215 Gene3D G3DSA:3.40.30.10 4 210 2.2E-34 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS06855 850596afdbe1e6e9d519c06558a1c1d3 215 SUPERFAMILY SSF52833 3 209 7.03E-28 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS06855 850596afdbe1e6e9d519c06558a1c1d3 215 Pfam PF01323 DSBA-like thioredoxin domain 6 204 1.4E-16 T 20-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 AMC99_RS06855 850596afdbe1e6e9d519c06558a1c1d3 215 PANTHER PTHR13887:SF22 6 212 1.9E-41 T 20-04-2016 AMC99_RS06855 850596afdbe1e6e9d519c06558a1c1d3 215 PIRSF PIRSF006386 2 215 4.3E-42 T 20-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa AMC99_RS06855 850596afdbe1e6e9d519c06558a1c1d3 215 PANTHER PTHR13887 6 212 1.9E-41 T 20-04-2016 AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 PANTHER PTHR11063:SF12 2 367 2.3E-88 T 20-04-2016 AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 SUPERFAMILY SSF88697 275 364 1.34E-10 T 20-04-2016 IPR015947 PUA-like domain AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 Gene3D G3DSA:3.40.1160.10 4 253 5.8E-52 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 256 32.49 T 20-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 PANTHER PTHR11063 2 367 2.3E-88 T 20-04-2016 AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 Gene3D G3DSA:2.30.130.10 272 362 1.1E-9 T 20-04-2016 IPR015947 PUA-like domain AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 363 6.4E-97 T 20-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 205 222 - T 20-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 Pfam PF01472 PUA domain 275 333 1.7E-6 T 20-04-2016 IPR002478 PUA domain GO:0003723 AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 SUPERFAMILY SSF53633 5 252 1.57E-59 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 PIRSF PIRSF000729 1 366 2.8E-102 T 20-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 PRINTS PR00474 Glutamate 5-kinase family signature 77 105 1.0E-45 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 PRINTS PR00474 Glutamate 5-kinase family signature 207 227 1.0E-45 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 PRINTS PR00474 Glutamate 5-kinase family signature 149 176 1.0E-45 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 PRINTS PR00474 Glutamate 5-kinase family signature 43 57 1.0E-45 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 PRINTS PR00474 Glutamate 5-kinase family signature 117 138 1.0E-45 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS09865 e9f7e613a094527e883e2407f2b1bd1c 379 Pfam PF00696 Amino acid kinase family 5 233 1.5E-42 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMC99_RS01445 18e700b798efb577961db53ab16292cc 221 PANTHER PTHR10920:SF20 12 219 3.1E-92 T 20-04-2016 AMC99_RS01445 18e700b798efb577961db53ab16292cc 221 Pfam PF01728 FtsJ-like methyltransferase 43 217 4.7E-51 T 20-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AMC99_RS01445 18e700b798efb577961db53ab16292cc 221 PANTHER PTHR10920 12 219 3.1E-92 T 20-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AMC99_RS01445 18e700b798efb577961db53ab16292cc 221 Gene3D G3DSA:3.40.50.150 13 219 1.6E-67 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS01445 18e700b798efb577961db53ab16292cc 221 SUPERFAMILY SSF53335 17 219 5.39E-37 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS01445 18e700b798efb577961db53ab16292cc 221 PIRSF PIRSF005461 7 221 2.5E-70 T 20-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AMC99_RS01445 18e700b798efb577961db53ab16292cc 221 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 23 217 28.084 T 20-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AMC99_RS06180 8c688756fded1c3f711c23a6095c7baa 523 SMART SM00862 26 101 1.2E-10 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS06180 8c688756fded1c3f711c23a6095c7baa 523 SUPERFAMILY SSF48452 289 479 1.1E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS06180 8c688756fded1c3f711c23a6095c7baa 523 Pfam PF00486 Transcriptional regulatory protein, C terminal 29 100 5.1E-13 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS06180 8c688756fded1c3f711c23a6095c7baa 523 SUPERFAMILY SSF46894 8 102 1.5E-15 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_RS06180 8c688756fded1c3f711c23a6095c7baa 523 Gene3D G3DSA:1.10.10.10 9 102 2.0E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS06180 8c688756fded1c3f711c23a6095c7baa 523 Gene3D G3DSA:1.25.40.10 270 485 2.5E-12 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS07195 a7b167ac7d8eb98a6f2e8231ad5d18e3 221 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 144 194 0.001 T 20-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 AMC99_RS07195 a7b167ac7d8eb98a6f2e8231ad5d18e3 221 Pfam PF13505 Outer membrane protein beta-barrel domain 14 221 5.0E-26 T 20-04-2016 IPR027385 Outer membrane protein beta-barrel AMC99_RS07195 a7b167ac7d8eb98a6f2e8231ad5d18e3 221 Gene3D G3DSA:2.40.160.20 14 221 3.2E-29 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMC99_RS07195 a7b167ac7d8eb98a6f2e8231ad5d18e3 221 PANTHER PTHR34001 29 221 6.3E-15 T 20-04-2016 AMC99_RS07195 a7b167ac7d8eb98a6f2e8231ad5d18e3 221 SUPERFAMILY SSF56925 38 221 1.18E-26 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMC99_RS11165 99739a88800c6e50497b837118516f42 127 SUPERFAMILY SSF141371 8 92 4.51E-7 T 20-04-2016 AMC99_RS11165 99739a88800c6e50497b837118516f42 127 Pfam PF07238 PilZ domain 8 90 5.6E-6 T 20-04-2016 IPR009875 PilZ domain GO:0035438 AMC99_RS05490 20523c7968ec855e044ffe1d61c395bf 393 Pfam PF05762 VWA domain containing CoxE-like protein 185 271 3.1E-9 T 20-04-2016 IPR008912 Uncharacterised protein family CoxE-like AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 Gene3D G3DSA:1.10.287.610 10 78 7.5E-22 T 20-04-2016 AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 15 332 1.7E-118 T 20-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 345 360 - T 20-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 23 685 4.8E-231 T 20-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 SUPERFAMILY SSF50249 332 407 1.47E-23 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 Gene3D G3DSA:3.30.470.30 134 266 1.4E-52 T 20-04-2016 AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 SUPERFAMILY SSF47781 415 601 1.11E-50 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 PANTHER PTHR23389:SF9 4 539 1.0E-173 T 20-04-2016 AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 Pfam PF12826 Helix-hairpin-helix motif 524 595 2.1E-13 T 20-04-2016 AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 Gene3D G3DSA:3.40.50.10190 615 690 4.5E-23 T 20-04-2016 IPR001357 BRCT domain AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 Gene3D G3DSA:1.10.150.20 447 516 2.6E-26 T 20-04-2016 AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 Gene3D G3DSA:1.10.150.20 518 602 1.8E-21 T 20-04-2016 AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 419 446 1.2E-10 T 20-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 SMART SM00292 615 692 1.6E-8 T 20-04-2016 IPR001357 BRCT domain AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 Hamap MF_01588 DNA ligase [ligA]. 14 689 49.609 T 20-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 SUPERFAMILY SSF56091 12 330 1.83E-113 T 20-04-2016 AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 335 407 3.6E-29 T 20-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 130 159 - T 20-04-2016 IPR018239 NAD-dependent DNA ligase, active site AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 PIRSF PIRSF001604 9 693 1.4E-228 T 20-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 PANTHER PTHR23389 4 539 1.0E-173 T 20-04-2016 AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 620 682 2.4E-8 T 20-04-2016 IPR001357 BRCT domain AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 Gene3D G3DSA:2.40.50.140 334 403 4.3E-31 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 SUPERFAMILY SSF52113 615 689 9.72E-17 T 20-04-2016 IPR001357 BRCT domain AMC99_RS06635 1208c2e041d24277a69d0e20b8a77663 693 SMART SM00532 15 460 7.0E-248 T 20-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AMC99_RS12975 af1caa9d8431c36fd8c3163e2af0967c 307 Pfam PF00892 EamA-like transporter family 162 298 5.2E-9 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_RS12975 af1caa9d8431c36fd8c3163e2af0967c 307 Pfam PF00892 EamA-like transporter family 19 147 1.9E-14 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_RS12975 af1caa9d8431c36fd8c3163e2af0967c 307 PANTHER PTHR32322 4 305 1.2E-35 T 20-04-2016 AMC99_RS12975 af1caa9d8431c36fd8c3163e2af0967c 307 SUPERFAMILY SSF103481 48 150 4.32E-14 T 20-04-2016 AMC99_RS12975 af1caa9d8431c36fd8c3163e2af0967c 307 SUPERFAMILY SSF103481 198 301 2.48E-7 T 20-04-2016 AMC99_RS10945 901a850adaff2aebcc56478c33ab5df4 136 PANTHER PTHR10173 9 134 2.4E-64 T 20-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 AMC99_RS10945 901a850adaff2aebcc56478c33ab5df4 136 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 9 133 36.742 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMC99_RS10945 901a850adaff2aebcc56478c33ab5df4 136 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 9 134 1.1E-55 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMC99_RS10945 901a850adaff2aebcc56478c33ab5df4 136 Pfam PF01641 SelR domain 12 132 1.3E-56 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMC99_RS10945 901a850adaff2aebcc56478c33ab5df4 136 SUPERFAMILY SSF51316 7 134 3.03E-59 T 20-04-2016 IPR011057 Mss4-like AMC99_RS10945 901a850adaff2aebcc56478c33ab5df4 136 Gene3D G3DSA:2.170.150.20 5 134 4.5E-64 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMC99_RS10945 901a850adaff2aebcc56478c33ab5df4 136 PANTHER PTHR10173:SF18 9 134 2.4E-64 T 20-04-2016 AMC99_RS03875 b835c8483d82141c430ea69145982b96 333 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 323 7.3E-96 T 20-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMC99_RS03875 b835c8483d82141c430ea69145982b96 333 PANTHER PTHR30365 1 327 3.9E-125 T 20-04-2016 AMC99_RS03875 b835c8483d82141c430ea69145982b96 333 PANTHER PTHR30365:SF4 1 327 3.9E-125 T 20-04-2016 AMC99_RS03875 b835c8483d82141c430ea69145982b96 333 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 329 7.3E-46 T 20-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMC99_RS06295 ea9c7a3263e1c5512b3581c75e30fcb7 407 SUPERFAMILY SSF53756 12 397 2.35E-30 T 20-04-2016 AMC99_RS06295 ea9c7a3263e1c5512b3581c75e30fcb7 407 Gene3D G3DSA:3.40.50.2000 264 377 2.6E-6 T 20-04-2016 AMC99_RS06295 ea9c7a3263e1c5512b3581c75e30fcb7 407 Pfam PF13692 Glycosyl transferases group 1 227 359 2.2E-22 T 20-04-2016 AMC99_RS06295 ea9c7a3263e1c5512b3581c75e30fcb7 407 TIGRFAM TIGR03087 stp1: sugar transferase, PEP-CTERM/EpsH1 system associated 4 397 9.9E-113 T 20-04-2016 IPR017521 Sugar transferase, PEP-CTERM, Stp1 AMC99_RS06295 ea9c7a3263e1c5512b3581c75e30fcb7 407 PANTHER PTHR12526 150 398 1.7E-16 T 20-04-2016 AMC99_RS09885 39651d3ccd25347aa7ae0f14cd32f7a6 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 399 3.1E-33 T 20-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS09885 39651d3ccd25347aa7ae0f14cd32f7a6 426 PANTHER PTHR11778 1 426 1.2E-185 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMC99_RS09885 39651d3ccd25347aa7ae0f14cd32f7a6 426 Gene3D G3DSA:1.10.287.40 1 106 5.7E-29 T 20-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 AMC99_RS09885 39651d3ccd25347aa7ae0f14cd32f7a6 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 415 6.8E-154 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMC99_RS09885 39651d3ccd25347aa7ae0f14cd32f7a6 426 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 1.1E-29 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMC99_RS09885 39651d3ccd25347aa7ae0f14cd32f7a6 426 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 1.1E-29 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMC99_RS09885 39651d3ccd25347aa7ae0f14cd32f7a6 426 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 1.1E-29 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMC99_RS09885 39651d3ccd25347aa7ae0f14cd32f7a6 426 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 1.1E-29 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMC99_RS09885 39651d3ccd25347aa7ae0f14cd32f7a6 426 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 1.1E-29 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMC99_RS09885 39651d3ccd25347aa7ae0f14cd32f7a6 426 PIRSF PIRSF001529 1 425 3.5E-164 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMC99_RS09885 39651d3ccd25347aa7ae0f14cd32f7a6 426 Gene3D G3DSA:3.30.930.10 107 419 1.4E-131 T 20-04-2016 AMC99_RS09885 39651d3ccd25347aa7ae0f14cd32f7a6 426 SUPERFAMILY SSF55681 118 417 2.86E-91 T 20-04-2016 AMC99_RS09885 39651d3ccd25347aa7ae0f14cd32f7a6 426 SUPERFAMILY SSF46589 1 114 5.23E-29 T 20-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 AMC99_RS09885 39651d3ccd25347aa7ae0f14cd32f7a6 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 7.2E-29 T 20-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 AMC99_RS09885 39651d3ccd25347aa7ae0f14cd32f7a6 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 39.384 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMC99_RS03060 7c426b93023807fe978fa039760aba95 193 SUPERFAMILY SSF50475 4 193 4.86E-28 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMC99_RS03060 7c426b93023807fe978fa039760aba95 193 Gene3D G3DSA:2.30.110.10 3 193 8.4E-41 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMC99_RS03060 7c426b93023807fe978fa039760aba95 193 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 28 99 9.3E-11 T 20-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMC99_RS08175 dc0dfd068d82f23cc847ed5b5dedbb14 227 SUPERFAMILY SSF56784 6 226 1.25E-48 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS08175 dc0dfd068d82f23cc847ed5b5dedbb14 227 Gene3D G3DSA:3.40.50.1000 83 224 1.2E-31 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS08175 dc0dfd068d82f23cc847ed5b5dedbb14 227 PANTHER PTHR18901 5 227 4.0E-42 T 20-04-2016 AMC99_RS08175 dc0dfd068d82f23cc847ed5b5dedbb14 227 PANTHER PTHR18901:SF14 5 227 4.0E-42 T 20-04-2016 AMC99_RS08175 dc0dfd068d82f23cc847ed5b5dedbb14 227 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 106 189 1.5E-6 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMC99_RS08175 dc0dfd068d82f23cc847ed5b5dedbb14 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 195 1.7E-26 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS08175 dc0dfd068d82f23cc847ed5b5dedbb14 227 Gene3D G3DSA:1.10.150.240 23 82 3.9E-11 T 20-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 Gene3D G3DSA:3.40.50.2300 732 847 4.9E-13 T 20-04-2016 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 Pfam PF00360 Phytochrome region 323 501 2.3E-45 T 20-04-2016 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 PANTHER PTHR24423 136 454 8.4E-56 T 20-04-2016 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 PANTHER PTHR24423 789 811 8.4E-56 T 20-04-2016 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 PANTHER PTHR24423 616 682 8.4E-56 T 20-04-2016 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 SMART SM00448 740 848 3.7E-4 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 SMART SM00065 144 317 1.3E-9 T 20-04-2016 IPR003018 GAF domain GO:0005515 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 Pfam PF01590 GAF domain 145 307 3.0E-17 T 20-04-2016 IPR003018 GAF domain GO:0005515 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 PRINTS PR01033 Phytochrome signature 428 447 8.3E-16 T 20-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 PRINTS PR01033 Phytochrome signature 245 266 8.3E-16 T 20-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 PRINTS PR01033 Phytochrome signature 159 178 8.3E-16 T 20-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 PRINTS PR01033 Phytochrome signature 462 480 8.3E-16 T 20-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 SUPERFAMILY SSF55781 132 309 3.93E-58 T 20-04-2016 IPR029016 GAF domain-like AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 PIRSF PIRSF036397 1 850 2.1E-278 T 20-04-2016 IPR009219 Bacteriophytochrome, CheY-like AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 Pfam PF08446 PAS fold 13 118 3.0E-17 T 20-04-2016 IPR013654 PAS fold-2 GO:0006355 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 PANTHER PTHR24423:SF414 136 454 8.4E-56 T 20-04-2016 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 PANTHER PTHR24423:SF414 789 811 8.4E-56 T 20-04-2016 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 PANTHER PTHR24423:SF414 616 682 8.4E-56 T 20-04-2016 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 SUPERFAMILY SSF55785 4 119 9.42E-29 T 20-04-2016 IPR000014 PAS domain AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 SUPERFAMILY SSF52172 740 848 3.84E-13 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 SUPERFAMILY SSF55781 322 503 3.63E-45 T 20-04-2016 IPR029016 GAF domain-like AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 SMART SM00911 523 605 1.5E-24 T 20-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 Pfam PF00072 Response regulator receiver domain 742 847 4.6E-8 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 Gene3D G3DSA:3.30.450.40 122 312 1.1E-12 T 20-04-2016 IPR029016 GAF domain-like AMC99_RS10790 f535b3a89d503fbfcb4b38eac385b59d 852 Pfam PF07536 HWE histidine kinase 523 604 1.2E-20 T 20-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_RS12540 1fb8843383b3aadd159c80d8ccdcb3fd 193 PANTHER PTHR13256 12 193 1.3E-32 T 20-04-2016 AMC99_RS12540 1fb8843383b3aadd159c80d8ccdcb3fd 193 SUPERFAMILY SSF55729 12 164 6.78E-36 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS12540 1fb8843383b3aadd159c80d8ccdcb3fd 193 Pfam PF13302 Acetyltransferase (GNAT) domain 15 159 1.6E-28 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS12540 1fb8843383b3aadd159c80d8ccdcb3fd 193 Gene3D G3DSA:3.40.630.30 10 190 4.7E-46 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 PANTHER PTHR24423 380 722 5.8E-56 T 20-04-2016 AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 Pfam PF00672 HAMP domain 309 378 8.0E-14 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 SUPERFAMILY SSF55785 385 492 1.67E-7 T 20-04-2016 IPR000014 PAS domain AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 PIRSF PIRSF037532 13 731 3.3E-199 T 20-04-2016 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 SMART SM00387 614 728 6.5E-27 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 SUPERFAMILY SSF158472 332 379 1.31E-9 T 20-04-2016 AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 Pfam PF00512 His Kinase A (phospho-acceptor) domain 504 570 3.1E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 SMART SM00388 502 573 2.5E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 615 724 1.8E-19 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 PANTHER PTHR24423:SF471 380 722 5.8E-56 T 20-04-2016 AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 687 1.4E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 688 706 1.4E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 674 1.4E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 SMART SM00304 329 382 8.3E-11 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 SUPERFAMILY SSF55874 566 725 4.45E-31 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 Gene3D G3DSA:1.10.287.130 497 558 1.1E-9 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 Gene3D G3DSA:3.30.450.20 391 492 8.6E-9 T 20-04-2016 AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 Gene3D G3DSA:3.30.565.10 559 726 1.1E-31 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS05780 6935d9ce8016f2781263e18c3f1403c3 737 SUPERFAMILY SSF47384 494 572 1.29E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS12395 58fd62cf539bd8b88bd327c112746d80 338 PANTHER PTHR21091 6 337 4.8E-101 T 20-04-2016 AMC99_RS12395 58fd62cf539bd8b88bd327c112746d80 338 Gene3D G3DSA:3.20.20.210 5 337 1.3E-115 T 20-04-2016 AMC99_RS12395 58fd62cf539bd8b88bd327c112746d80 338 PANTHER PTHR21091:SF2 6 337 4.8E-101 T 20-04-2016 AMC99_RS12395 58fd62cf539bd8b88bd327c112746d80 338 SUPERFAMILY SSF51726 5 337 2.27E-97 T 20-04-2016 AMC99_RS12395 58fd62cf539bd8b88bd327c112746d80 338 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 5 337 1.4E-115 T 20-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMC99_RS12395 58fd62cf539bd8b88bd327c112746d80 338 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 337 9.9E-107 T 20-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMC99_RS12395 58fd62cf539bd8b88bd327c112746d80 338 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 18 27 - T 20-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMC99_RS12395 58fd62cf539bd8b88bd327c112746d80 338 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 1 338 42.966 T 20-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMC99_RS11480 4861b294ff3adda3ad83d386c201a9a3 65 SUPERFAMILY SSF47598 6 52 8.34E-10 T 20-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 AMC99_RS11480 4861b294ff3adda3ad83d386c201a9a3 65 Gene3D G3DSA:1.10.1220.10 9 46 7.5E-7 T 20-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AMC99_RS07870 caf248eb49f186e0fb43efbc8deb4435 307 SUPERFAMILY SSF54631 76 214 1.22E-28 T 20-04-2016 AMC99_RS07870 caf248eb49f186e0fb43efbc8deb4435 307 Pfam PF00571 CBS domain 88 139 4.6E-5 T 20-04-2016 IPR000644 CBS domain AMC99_RS07870 caf248eb49f186e0fb43efbc8deb4435 307 SMART SM01091 218 299 2.0E-14 T 20-04-2016 IPR005170 Transporter-associated domain AMC99_RS07870 caf248eb49f186e0fb43efbc8deb4435 307 SUPERFAMILY SSF56176 216 299 1.85E-14 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMC99_RS07870 caf248eb49f186e0fb43efbc8deb4435 307 Pfam PF03471 Transporter associated domain 220 296 1.7E-13 T 20-04-2016 IPR005170 Transporter-associated domain AMC99_RS07870 caf248eb49f186e0fb43efbc8deb4435 307 Gene3D G3DSA:3.30.465.10 197 296 4.4E-18 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMC99_RS07870 caf248eb49f186e0fb43efbc8deb4435 307 Gene3D G3DSA:3.10.580.10 66 196 4.7E-16 T 20-04-2016 AMC99_RS07870 caf248eb49f186e0fb43efbc8deb4435 307 PANTHER PTHR22777 56 306 7.4E-73 T 20-04-2016 AMC99_RS00820 a21c31127131e866b2009a26ef54b7be 283 SUPERFAMILY SSF53795 98 174 3.97E-14 T 20-04-2016 AMC99_RS00820 a21c31127131e866b2009a26ef54b7be 283 Gene3D G3DSA:3.40.50.300 97 224 1.4E-18 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 SUPERFAMILY SSF51735 17 266 3.85E-71 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 27 264 6.0E-55 T 20-04-2016 AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 193 1.2E-29 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 1.2E-29 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 164 1.2E-29 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 249 1.2E-29 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 1.2E-29 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 212 1.2E-29 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 1.5E-6 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 193 1.5E-6 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 1.5E-6 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 161 189 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 PANTHER PTHR24322 25 158 4.1E-47 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 PANTHER PTHR24322 174 206 4.1E-47 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 21 210 2.4E-4 T 20-04-2016 AMC99_RS10185 adeaa1a3662a7f60757f0a2e21bd9b26 267 Gene3D G3DSA:3.40.50.720 16 266 6.2E-78 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06630 bdf044b408a547b98068779fa424de80 169 Gene3D G3DSA:3.90.950.20 7 164 1.0E-34 T 20-04-2016 IPR008136 CinA, C-terminal AMC99_RS06630 bdf044b408a547b98068779fa424de80 169 Pfam PF02464 Competence-damaged protein 11 163 1.0E-34 T 20-04-2016 IPR008136 CinA, C-terminal AMC99_RS06630 bdf044b408a547b98068779fa424de80 169 PANTHER PTHR13939 6 169 2.8E-29 T 20-04-2016 AMC99_RS06630 bdf044b408a547b98068779fa424de80 169 SUPERFAMILY SSF142433 5 163 9.94E-35 T 20-04-2016 IPR008136 CinA, C-terminal AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 Gene3D G3DSA:3.40.50.1370 20 159 6.5E-46 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 PANTHER PTHR11405:SF16 22 327 1.9E-114 T 20-04-2016 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 23 165 8.4E-34 T 20-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 SUPERFAMILY SSF53671 20 328 2.23E-88 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 153 164 2.4E-11 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 280 289 2.4E-11 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 69 88 2.4E-11 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 180 325 1.4E-20 T 20-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 PANTHER PTHR11405 22 327 1.9E-114 T 20-04-2016 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 Gene3D G3DSA:3.40.50.1370 160 303 3.0E-46 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 69 76 - T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 22 330 37.984 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 23 327 8.3E-90 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 97 106 1.3E-25 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 284 289 1.3E-25 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 152 169 1.3E-25 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 243 252 1.3E-25 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 59 81 1.3E-25 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS09840 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 309 323 1.3E-25 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS00160 2639986748caaa76a62d8bf1f8055e11 107 PANTHER PTHR10245 5 77 6.3E-13 T 20-04-2016 AMC99_RS00160 2639986748caaa76a62d8bf1f8055e11 107 PANTHER PTHR10245:SF49 5 77 6.3E-13 T 20-04-2016 AMC99_RS00160 2639986748caaa76a62d8bf1f8055e11 107 SMART SM00530 8 64 2.9E-11 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS00160 2639986748caaa76a62d8bf1f8055e11 107 SUPERFAMILY SSF47413 3 66 1.52E-15 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS00160 2639986748caaa76a62d8bf1f8055e11 107 Gene3D G3DSA:1.10.260.40 5 102 1.6E-20 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS00160 2639986748caaa76a62d8bf1f8055e11 107 Pfam PF13560 Helix-turn-helix domain 5 61 6.6E-13 T 20-04-2016 AMC99_RS09000 e5e0bd381fbfee0cd2a3afc595ba652c 256 Gene3D G3DSA:3.30.950.10 121 241 7.2E-37 T 20-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 AMC99_RS09000 e5e0bd381fbfee0cd2a3afc595ba652c 256 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 85 118 - T 20-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMC99_RS09000 e5e0bd381fbfee0cd2a3afc595ba652c 256 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 5 237 6.2E-84 T 20-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMC99_RS09000 e5e0bd381fbfee0cd2a3afc595ba652c 256 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 214 3.5E-52 T 20-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMC99_RS09000 e5e0bd381fbfee0cd2a3afc595ba652c 256 PANTHER PTHR21091 1 235 2.8E-70 T 20-04-2016 AMC99_RS09000 e5e0bd381fbfee0cd2a3afc595ba652c 256 Gene3D G3DSA:3.40.1010.10 4 120 1.6E-44 T 20-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 AMC99_RS09000 e5e0bd381fbfee0cd2a3afc595ba652c 256 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 10 24 - T 20-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMC99_RS09000 e5e0bd381fbfee0cd2a3afc595ba652c 256 SUPERFAMILY SSF53790 4 238 6.54E-72 T 20-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMC99_RS09000 e5e0bd381fbfee0cd2a3afc595ba652c 256 PANTHER PTHR21091:SF16 1 235 2.8E-70 T 20-04-2016 AMC99_RS05090 9b95ca1b9d236681dd0da63882ab6b20 223 SUPERFAMILY SSF55469 26 222 6.94E-44 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 AMC99_RS05090 9b95ca1b9d236681dd0da63882ab6b20 223 PANTHER PTHR23026 1 223 2.2E-54 T 20-04-2016 AMC99_RS05090 9b95ca1b9d236681dd0da63882ab6b20 223 PANTHER PTHR23026:SF90 1 223 2.2E-54 T 20-04-2016 AMC99_RS05090 9b95ca1b9d236681dd0da63882ab6b20 223 Gene3D G3DSA:3.40.109.10 28 222 5.1E-46 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 AMC99_RS05090 9b95ca1b9d236681dd0da63882ab6b20 223 Pfam PF00881 Nitroreductase family 30 199 2.9E-26 T 20-04-2016 IPR029479 Nitroreductase AMC99_RS08630 22fc01da999b924da2850a77d14db871 357 Gene3D G3DSA:3.40.640.10 17 230 3.9E-47 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS08630 22fc01da999b924da2850a77d14db871 357 Gene3D G3DSA:3.90.1150.10 231 351 8.7E-28 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS08630 22fc01da999b924da2850a77d14db871 357 SUPERFAMILY SSF53383 4 351 1.42E-66 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS08630 22fc01da999b924da2850a77d14db871 357 Pfam PF00266 Aminotransferase class-V 5 347 3.1E-41 T 20-04-2016 IPR000192 Aminotransferase class V domain AMC99_RS08630 22fc01da999b924da2850a77d14db871 357 PANTHER PTHR11601 3 349 9.2E-73 T 20-04-2016 AMC99_RS08630 22fc01da999b924da2850a77d14db871 357 PIRSF PIRSF005572 2 357 1.9E-87 T 20-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AMC99_RS08630 22fc01da999b924da2850a77d14db871 357 PANTHER PTHR11601:SF45 3 349 9.2E-73 T 20-04-2016 AMC99_RS09895 334c57c1947631a79a93d25d0d9b502c 349 SUPERFAMILY SSF81324 18 160 5.76E-21 T 20-04-2016 AMC99_RS09895 334c57c1947631a79a93d25d0d9b502c 349 PANTHER PTHR16254:SF21 36 300 8.5E-47 T 20-04-2016 AMC99_RS09895 334c57c1947631a79a93d25d0d9b502c 349 SUPERFAMILY SSF51735 135 278 2.76E-28 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09895 334c57c1947631a79a93d25d0d9b502c 349 Pfam PF02254 TrkA-N domain 139 257 3.2E-24 T 20-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMC99_RS09895 334c57c1947631a79a93d25d0d9b502c 349 PANTHER PTHR16254 36 300 8.5E-47 T 20-04-2016 AMC99_RS09895 334c57c1947631a79a93d25d0d9b502c 349 Gene3D G3DSA:1.10.287.70 35 121 6.2E-11 T 20-04-2016 AMC99_RS09895 334c57c1947631a79a93d25d0d9b502c 349 Pfam PF07885 Ion channel 49 118 4.3E-11 T 20-04-2016 IPR013099 Potassium channel domain AMC99_RS09895 334c57c1947631a79a93d25d0d9b502c 349 Gene3D G3DSA:3.40.50.720 133 267 4.6E-30 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02000 82bcb4724bbac8b3449a1973dbb19a68 135 PANTHER PTHR33337 1 122 1.0E-29 T 20-04-2016 AMC99_RS02000 82bcb4724bbac8b3449a1973dbb19a68 135 Gene3D G3DSA:3.90.1590.10 1 130 5.6E-43 T 20-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMC99_RS02000 82bcb4724bbac8b3449a1973dbb19a68 135 SUPERFAMILY SSF51316 1 134 7.53E-44 T 20-04-2016 IPR011057 Mss4-like AMC99_RS02000 82bcb4724bbac8b3449a1973dbb19a68 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 115 6.6E-28 T 20-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMC99_RS02000 82bcb4724bbac8b3449a1973dbb19a68 135 PANTHER PTHR33337:SF9 1 122 1.0E-29 T 20-04-2016 AMC99_RS01405 65015d09e9191775122e2dd39b8b335d 305 PANTHER PTHR38480:SF1 11 197 1.3E-12 T 20-04-2016 AMC99_RS01405 65015d09e9191775122e2dd39b8b335d 305 Pfam PF06271 RDD family 30 193 1.6E-17 T 20-04-2016 IPR010432 RDD AMC99_RS01405 65015d09e9191775122e2dd39b8b335d 305 PANTHER PTHR38480 11 197 1.3E-12 T 20-04-2016 AMC99_RS09490 7af38bd4ab2e6978f0ac39abf4dfca79 334 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 310 326 2.1E-6 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMC99_RS09490 7af38bd4ab2e6978f0ac39abf4dfca79 334 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 295 310 2.1E-6 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMC99_RS09490 7af38bd4ab2e6978f0ac39abf4dfca79 334 PANTHER PTHR11019 180 334 2.0E-19 T 20-04-2016 AMC99_RS09490 7af38bd4ab2e6978f0ac39abf4dfca79 334 SUPERFAMILY SSF46689 279 329 2.19E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS09490 7af38bd4ab2e6978f0ac39abf4dfca79 334 Gene3D G3DSA:1.10.10.60 279 328 3.0E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS09490 7af38bd4ab2e6978f0ac39abf4dfca79 334 Pfam PF12833 Helix-turn-helix domain 250 327 1.8E-16 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_RS09490 7af38bd4ab2e6978f0ac39abf4dfca79 334 PANTHER PTHR11019:SF52 180 334 2.0E-19 T 20-04-2016 AMC99_RS09490 7af38bd4ab2e6978f0ac39abf4dfca79 334 SMART SM00342 244 326 9.1E-21 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_RS09490 7af38bd4ab2e6978f0ac39abf4dfca79 334 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 280 322 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMC99_RS04475 13d3b82dfcf43205824423142840849b 149 PANTHER PTHR21366 1 139 4.2E-38 T 20-04-2016 AMC99_RS04475 13d3b82dfcf43205824423142840849b 149 Gene3D G3DSA:3.10.180.10 1 139 3.6E-37 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS04475 13d3b82dfcf43205824423142840849b 149 SUPERFAMILY SSF54593 1 142 3.36E-31 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS04475 13d3b82dfcf43205824423142840849b 149 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 124 4.8E-18 T 20-04-2016 AMC99_RS04475 13d3b82dfcf43205824423142840849b 149 PANTHER PTHR21366:SF9 1 139 4.2E-38 T 20-04-2016 AMC99_RS04475 13d3b82dfcf43205824423142840849b 149 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 5 139 8.3E-37 T 20-04-2016 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384 AMC99_RS01685 e3cf0be57e04f70459f8f97d041557be 381 SUPERFAMILY SSF47203 228 380 1.93E-58 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS01685 e3cf0be57e04f70459f8f97d041557be 381 Gene3D G3DSA:2.40.110.10 123 217 1.5E-39 T 20-04-2016 AMC99_RS01685 e3cf0be57e04f70459f8f97d041557be 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 378 1.8E-47 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS01685 e3cf0be57e04f70459f8f97d041557be 381 Gene3D G3DSA:1.10.540.10 4 120 9.1E-38 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS01685 e3cf0be57e04f70459f8f97d041557be 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_RS01685 e3cf0be57e04f70459f8f97d041557be 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_RS01685 e3cf0be57e04f70459f8f97d041557be 381 Gene3D G3DSA:1.20.140.10 218 380 3.6E-67 T 20-04-2016 AMC99_RS01685 e3cf0be57e04f70459f8f97d041557be 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 217 1.0E-26 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS01685 e3cf0be57e04f70459f8f97d041557be 381 PANTHER PTHR10909 1 381 2.5E-180 T 20-04-2016 AMC99_RS01685 e3cf0be57e04f70459f8f97d041557be 381 SUPERFAMILY SSF56645 4 242 2.88E-82 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS01685 e3cf0be57e04f70459f8f97d041557be 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 1.8E-29 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS01685 e3cf0be57e04f70459f8f97d041557be 381 PANTHER PTHR10909:SF305 1 381 2.5E-180 T 20-04-2016 AMC99_RS01495 35599692aaec7fdcae966e2b75e9dbf9 202 PIRSF PIRSF000349 1 200 6.3E-71 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMC99_RS01495 35599692aaec7fdcae966e2b75e9dbf9 202 PANTHER PTHR11404 1 195 2.4E-83 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMC99_RS01495 35599692aaec7fdcae966e2b75e9dbf9 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 91 191 7.7E-31 T 20-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMC99_RS01495 35599692aaec7fdcae966e2b75e9dbf9 202 SUPERFAMILY SSF54719 87 195 1.96E-36 T 20-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMC99_RS01495 35599692aaec7fdcae966e2b75e9dbf9 202 SUPERFAMILY SSF46609 1 86 5.63E-30 T 20-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMC99_RS01495 35599692aaec7fdcae966e2b75e9dbf9 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 20-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMC99_RS01495 35599692aaec7fdcae966e2b75e9dbf9 202 Gene3D G3DSA:1.10.287.990 20 85 9.8E-21 T 20-04-2016 AMC99_RS01495 35599692aaec7fdcae966e2b75e9dbf9 202 PANTHER PTHR11404:SF8 1 195 2.4E-83 T 20-04-2016 AMC99_RS01495 35599692aaec7fdcae966e2b75e9dbf9 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 6.6E-29 T 20-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMC99_RS01495 35599692aaec7fdcae966e2b75e9dbf9 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.4E-18 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMC99_RS01495 35599692aaec7fdcae966e2b75e9dbf9 202 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.4E-18 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMC99_RS01495 35599692aaec7fdcae966e2b75e9dbf9 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 1.4E-18 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMC99_RS01495 35599692aaec7fdcae966e2b75e9dbf9 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.4E-18 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMC99_RS01495 35599692aaec7fdcae966e2b75e9dbf9 202 PRINTS PR01703 Manganese superoxide dismutase signature 120 128 1.4E-18 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMC99_RS03150 86c26db3039d24acc1bba8eb888d5f42 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 8 145 8.4E-52 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMC99_RS03150 86c26db3039d24acc1bba8eb888d5f42 149 Gene3D G3DSA:3.40.50.9100 8 146 6.4E-60 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMC99_RS03150 86c26db3039d24acc1bba8eb888d5f42 149 SUPERFAMILY SSF52304 8 146 1.13E-56 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMC99_RS03150 86c26db3039d24acc1bba8eb888d5f42 149 PANTHER PTHR21272 3 146 1.7E-69 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMC99_RS03150 86c26db3039d24acc1bba8eb888d5f42 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 61.118 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMC99_RS03150 86c26db3039d24acc1bba8eb888d5f42 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 11 28 - T 20-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMC99_RS03150 86c26db3039d24acc1bba8eb888d5f42 149 Pfam PF01220 Dehydroquinase class II 8 144 3.9E-55 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMC99_RS03150 86c26db3039d24acc1bba8eb888d5f42 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 8 145 7.0E-58 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMC99_RS03150 86c26db3039d24acc1bba8eb888d5f42 149 PIRSF PIRSF001399 4 148 5.5E-58 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMC99_RS10210 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 Pfam PF00107 Zinc-binding dehydrogenase 179 304 6.6E-19 T 20-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_RS10210 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 SMART SM00829 8 343 0.0024 T 20-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_RS10210 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 Gene3D G3DSA:3.90.180.10 1 170 5.5E-52 T 20-04-2016 IPR011032 GroES-like AMC99_RS10210 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 1.5E-27 T 20-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_RS10210 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 SUPERFAMILY SSF50129 1 168 1.89E-51 T 20-04-2016 IPR011032 GroES-like AMC99_RS10210 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 SUPERFAMILY SSF51735 141 310 1.84E-38 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS10210 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 PANTHER PTHR11695:SF281 12 346 2.4E-108 T 20-04-2016 AMC99_RS10210 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 20-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 AMC99_RS10210 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 PANTHER PTHR11695 12 346 2.4E-108 T 20-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMC99_RS10210 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 Gene3D G3DSA:3.40.50.720 171 287 1.2E-32 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 Pfam PF02978 Signal peptide binding domain 328 428 3.4E-29 T 20-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 4.4E-70 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 SUPERFAMILY SSF47446 328 429 2.75E-32 T 20-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 SMART SM00382 100 296 7.5E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.6E-20 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 430 5.2E-174 T 20-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 466 32.424 T 20-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 Gene3D G3DSA:1.10.260.30 328 433 7.0E-34 T 20-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 SUPERFAMILY SSF52540 42 355 7.26E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 Gene3D G3DSA:1.20.120.140 2 88 8.5E-34 T 20-04-2016 AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 PANTHER PTHR11564 1 435 3.8E-232 T 20-04-2016 AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 SMART SM00963 1 86 4.1E-36 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 PANTHER PTHR11564:SF7 1 435 3.8E-232 T 20-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 SMART SM00962 101 297 5.0E-107 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMC99_RS06920 b8964bacb6b04c87358262564300b06e 493 Gene3D G3DSA:3.40.50.300 96 298 6.0E-71 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02320 e375e716dfff5b93d5e7746ec2e9c769 678 SUPERFAMILY SSF52096 3 288 2.23E-65 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS02320 e375e716dfff5b93d5e7746ec2e9c769 678 Gene3D G3DSA:1.10.1040.10 479 562 5.4E-15 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMC99_RS02320 e375e716dfff5b93d5e7746ec2e9c769 678 Gene3D G3DSA:3.90.226.10 3 279 4.6E-59 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS02320 e375e716dfff5b93d5e7746ec2e9c769 678 SUPERFAMILY SSF51735 293 472 7.6E-59 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02320 e375e716dfff5b93d5e7746ec2e9c769 678 SUPERFAMILY SSF48179 476 609 2.3E-25 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMC99_RS02320 e375e716dfff5b93d5e7746ec2e9c769 678 SUPERFAMILY SSF48179 591 677 4.08E-20 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMC99_RS02320 e375e716dfff5b93d5e7746ec2e9c769 678 PANTHER PTHR23309 2 677 2.2E-287 T 20-04-2016 AMC99_RS02320 e375e716dfff5b93d5e7746ec2e9c769 678 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 92 112 - T 20-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AMC99_RS02320 e375e716dfff5b93d5e7746ec2e9c769 678 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 296 471 3.2E-62 T 20-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AMC99_RS02320 e375e716dfff5b93d5e7746ec2e9c769 678 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 598 660 5.8E-6 T 20-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AMC99_RS02320 e375e716dfff5b93d5e7746ec2e9c769 678 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 477 561 6.5E-18 T 20-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AMC99_RS02320 e375e716dfff5b93d5e7746ec2e9c769 678 Gene3D G3DSA:1.10.1040.10 601 674 1.4E-11 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMC99_RS02320 e375e716dfff5b93d5e7746ec2e9c769 678 Gene3D G3DSA:3.40.50.720 293 478 3.5E-61 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02320 e375e716dfff5b93d5e7746ec2e9c769 678 PANTHER PTHR23309:SF9 2 677 2.2E-287 T 20-04-2016 AMC99_RS02320 e375e716dfff5b93d5e7746ec2e9c769 678 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 188 5.7E-39 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMC99_RS13350 38dff28352e9268b101f013dad049b8a 416 Pfam PF00155 Aminotransferase class I and II 63 403 5.4E-55 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMC99_RS13350 38dff28352e9268b101f013dad049b8a 416 Gene3D G3DSA:3.90.1150.10 298 410 5.6E-21 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS13350 38dff28352e9268b101f013dad049b8a 416 SUPERFAMILY SSF53383 36 414 1.46E-103 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS13350 38dff28352e9268b101f013dad049b8a 416 Gene3D G3DSA:3.40.640.10 81 297 1.3E-83 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS13350 38dff28352e9268b101f013dad049b8a 416 PANTHER PTHR13693 60 416 1.3E-127 T 20-04-2016 AMC99_RS13350 38dff28352e9268b101f013dad049b8a 416 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 259 268 - T 20-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AMC99_RS05815 52083b4e81cbb1f45cad5fc91f10d390 318 Pfam PF04055 Radical SAM superfamily 74 233 2.3E-11 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_RS05815 52083b4e81cbb1f45cad5fc91f10d390 318 Gene3D G3DSA:3.20.20.70 35 304 1.4E-67 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS05815 52083b4e81cbb1f45cad5fc91f10d390 318 SUPERFAMILY SSF102114 34 298 2.49E-59 T 20-04-2016 AMC99_RS05815 52083b4e81cbb1f45cad5fc91f10d390 318 Hamap MF_00206 Lipoyl synthase [lipA]. 1 306 147.971 T 20-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMC99_RS05815 52083b4e81cbb1f45cad5fc91f10d390 318 PANTHER PTHR10949:SF0 18 298 1.4E-154 T 20-04-2016 AMC99_RS05815 52083b4e81cbb1f45cad5fc91f10d390 318 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 12 56 7.0E-11 T 20-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMC99_RS05815 52083b4e81cbb1f45cad5fc91f10d390 318 PIRSF PIRSF005963 2 318 8.8E-132 T 20-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMC99_RS05815 52083b4e81cbb1f45cad5fc91f10d390 318 PANTHER PTHR10949 18 298 1.4E-154 T 20-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMC99_RS05815 52083b4e81cbb1f45cad5fc91f10d390 318 TIGRFAM TIGR00510 lipA: lipoyl synthase 15 303 4.1E-114 T 20-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMC99_RS05815 52083b4e81cbb1f45cad5fc91f10d390 318 SMART SM00729 67 273 1.4E-7 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMC99_RS01010 2f7dafba037709893b232aae188d7c26 138 SUPERFAMILY SSF53927 4 138 3.46E-40 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMC99_RS01010 2f7dafba037709893b232aae188d7c26 138 Gene3D G3DSA:3.40.140.10 3 138 3.7E-46 T 20-04-2016 AMC99_RS01010 2f7dafba037709893b232aae188d7c26 138 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 98 - T 20-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMC99_RS01010 2f7dafba037709893b232aae188d7c26 138 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 9 136 8.6E-41 T 20-04-2016 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AMC99_RS01010 2f7dafba037709893b232aae188d7c26 138 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 101 2.2E-14 T 20-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AMC99_RS01010 2f7dafba037709893b232aae188d7c26 138 PANTHER PTHR11644 3 138 3.6E-49 T 20-04-2016 AMC99_RS02010 8df751267cd7ef286908d2a0498b533c 82 PANTHER PTHR13844 5 82 1.2E-24 T 20-04-2016 AMC99_RS02010 8df751267cd7ef286908d2a0498b533c 82 SUPERFAMILY SSF47592 4 81 3.92E-26 T 20-04-2016 IPR003121 SWIB/MDM2 domain GO:0005515 AMC99_RS02010 8df751267cd7ef286908d2a0498b533c 82 Gene3D G3DSA:1.10.245.10 3 81 6.7E-30 T 20-04-2016 IPR003121 SWIB/MDM2 domain GO:0005515 AMC99_RS02010 8df751267cd7ef286908d2a0498b533c 82 SMART SM00151 7 81 1.4E-27 T 20-04-2016 IPR019835 SWIB domain AMC99_RS02010 8df751267cd7ef286908d2a0498b533c 82 Pfam PF02201 SWIB/MDM2 domain 9 81 1.2E-28 T 20-04-2016 IPR003121 SWIB/MDM2 domain GO:0005515 AMC99_RS06350 51684e74e2134a9c28957ac2c6a2e0c0 105 Gene3D G3DSA:1.10.1200.10 20 99 9.5E-13 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMC99_RS06350 51684e74e2134a9c28957ac2c6a2e0c0 105 Pfam PF00550 Phosphopantetheine attachment site 25 94 3.7E-8 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMC99_RS06350 51684e74e2134a9c28957ac2c6a2e0c0 105 SUPERFAMILY SSF47336 25 100 1.73E-9 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMC99_RS10090 6d563947443740aaebddf74bfeac7e4e 121 Gene3D G3DSA:3.40.50.2300 3 116 8.0E-36 T 20-04-2016 AMC99_RS10090 6d563947443740aaebddf74bfeac7e4e 121 SMART SM00448 2 115 4.1E-35 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS10090 6d563947443740aaebddf74bfeac7e4e 121 Pfam PF00072 Response regulator receiver domain 5 115 8.3E-31 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS10090 6d563947443740aaebddf74bfeac7e4e 121 SUPERFAMILY SSF52172 2 117 2.42E-36 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS10090 6d563947443740aaebddf74bfeac7e4e 121 PANTHER PTHR26402 2 118 1.2E-38 T 20-04-2016 AMC99_RS08235 4badbd23848742f63f1f50e96bd97484 381 Gene3D G3DSA:3.40.50.200 98 352 1.3E-61 T 20-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMC99_RS08235 4badbd23848742f63f1f50e96bd97484 381 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 148 159 - T 20-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site AMC99_RS08235 4badbd23848742f63f1f50e96bd97484 381 PANTHER PTHR10795 3 106 6.1E-71 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related AMC99_RS08235 4badbd23848742f63f1f50e96bd97484 381 PANTHER PTHR10795 131 352 6.1E-71 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related AMC99_RS08235 4badbd23848742f63f1f50e96bd97484 381 Gene3D G3DSA:3.30.70.80 25 97 8.6E-12 T 20-04-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 AMC99_RS08235 4badbd23848742f63f1f50e96bd97484 381 SUPERFAMILY SSF52743 142 352 4.19E-59 T 20-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMC99_RS08235 4badbd23848742f63f1f50e96bd97484 381 Pfam PF00082 Subtilase family 150 352 2.7E-30 T 20-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMC99_RS08235 4badbd23848742f63f1f50e96bd97484 381 PANTHER PTHR10795:SF389 3 106 6.1E-71 T 20-04-2016 AMC99_RS08235 4badbd23848742f63f1f50e96bd97484 381 PANTHER PTHR10795:SF389 131 352 6.1E-71 T 20-04-2016 AMC99_RS08235 4badbd23848742f63f1f50e96bd97484 381 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 184 194 - T 20-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site AMC99_RS08235 4badbd23848742f63f1f50e96bd97484 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 339 355 2.4E-16 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related AMC99_RS08235 4badbd23848742f63f1f50e96bd97484 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 143 162 2.4E-16 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related AMC99_RS08235 4badbd23848742f63f1f50e96bd97484 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 180 193 2.4E-16 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related AMC99_RS08235 4badbd23848742f63f1f50e96bd97484 381 SUPERFAMILY SSF54897 30 104 3.17E-8 T 20-04-2016 IPR009020 Proteinase inhibitor, propeptide AMC99_RS08235 4badbd23848742f63f1f50e96bd97484 381 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 340 350 - T 20-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site AMC99_RS03085 49f91780845930d5cd832cdb37be9585 557 Gene3D G3DSA:3.40.50.300 143 290 1.0E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03085 49f91780845930d5cd832cdb37be9585 557 Gene3D G3DSA:3.40.50.300 9 107 1.0E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03085 49f91780845930d5cd832cdb37be9585 557 SUPERFAMILY SSF52540 9 246 1.68E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03085 49f91780845930d5cd832cdb37be9585 557 SMART SM00382 350 526 2.0E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS03085 49f91780845930d5cd832cdb37be9585 557 SMART SM00382 33 234 1.5E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS03085 49f91780845930d5cd832cdb37be9585 557 Gene3D G3DSA:3.40.50.300 324 536 2.0E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03085 49f91780845930d5cd832cdb37be9585 557 SUPERFAMILY SSF52540 312 524 3.81E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03085 49f91780845930d5cd832cdb37be9585 557 Pfam PF12848 ABC transporter 232 305 9.1E-15 T 20-04-2016 IPR032781 ABC-transporter extension domain AMC99_RS03085 49f91780845930d5cd832cdb37be9585 557 PANTHER PTHR19211 9 557 0.0 T 20-04-2016 AMC99_RS03085 49f91780845930d5cd832cdb37be9585 557 PANTHER PTHR19211:SF7 9 557 0.0 T 20-04-2016 AMC99_RS03085 49f91780845930d5cd832cdb37be9585 557 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 555 2.1E-286 T 20-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD AMC99_RS03085 49f91780845930d5cd832cdb37be9585 557 Pfam PF00005 ABC transporter 342 475 1.6E-24 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS03085 49f91780845930d5cd832cdb37be9585 557 Pfam PF00005 ABC transporter 24 193 1.3E-26 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS05155 f168c2ea83d99874f316c609fcecf53a 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 372 2.3E-146 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS05155 f168c2ea83d99874f316c609fcecf53a 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 7 372 1.2E-151 T 20-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS05155 f168c2ea83d99874f316c609fcecf53a 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 5 366 56.517 T 20-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS05155 f168c2ea83d99874f316c609fcecf53a 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 131 368 2.6E-84 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS05155 f168c2ea83d99874f316c609fcecf53a 375 PANTHER PTHR21148 1 374 1.1E-157 T 20-04-2016 AMC99_RS05155 f168c2ea83d99874f316c609fcecf53a 375 PANTHER PTHR21148:SF26 1 374 1.1E-157 T 20-04-2016 AMC99_RS05155 f168c2ea83d99874f316c609fcecf53a 375 SUPERFAMILY SSF51713 4 370 3.27E-153 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS05155 f168c2ea83d99874f316c609fcecf53a 375 Gene3D G3DSA:3.20.20.105 3 372 3.2E-157 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS09575 e73b0e25194fac2f7726bcd376793f84 68 PANTHER PTHR21109 1 67 7.7E-28 T 20-04-2016 AMC99_RS09575 e73b0e25194fac2f7726bcd376793f84 68 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 36 2.0E-6 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMC99_RS09575 e73b0e25194fac2f7726bcd376793f84 68 ProSitePatterns PS01181 Ribosomal protein S21 signature. 11 23 - T 20-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS09575 e73b0e25194fac2f7726bcd376793f84 68 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 1 56 8.6E-21 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMC99_RS09575 e73b0e25194fac2f7726bcd376793f84 68 PRINTS PR00976 Ribosomal protein S21 family signature 23 33 9.1E-5 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMC99_RS09575 e73b0e25194fac2f7726bcd376793f84 68 PRINTS PR00976 Ribosomal protein S21 family signature 35 45 9.1E-5 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMC99_RS09575 e73b0e25194fac2f7726bcd376793f84 68 PRINTS PR00976 Ribosomal protein S21 family signature 11 20 9.1E-5 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMC99_RS09575 e73b0e25194fac2f7726bcd376793f84 68 PANTHER PTHR21109:SF3 1 67 7.7E-28 T 20-04-2016 AMC99_RS09575 e73b0e25194fac2f7726bcd376793f84 68 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 55 14.221 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMC99_RS09575 e73b0e25194fac2f7726bcd376793f84 68 Pfam PF01165 Ribosomal protein S21 2 55 1.4E-19 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 SMART SM00382 87 242 8.8E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 SUPERFAMILY SSF54211 253 267 1.44E-31 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 SUPERFAMILY SSF54211 301 431 1.44E-31 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 PANTHER PTHR32472:SF10 1 420 9.0E-175 T 20-04-2016 AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 Pfam PF13481 AAA domain 80 220 9.6E-15 T 20-04-2016 AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 SUPERFAMILY SSF52540 68 288 2.28E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 Gene3D G3DSA:3.30.230.10 283 430 1.4E-26 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 Gene3D G3DSA:3.40.50.300 69 275 7.5E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 431 1.2E-162 T 20-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 PANTHER PTHR32472 1 420 9.0E-175 T 20-04-2016 AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 PRINTS PR01874 DNA repair protein radA signature 10 34 2.2E-88 T 20-04-2016 AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 PRINTS PR01874 DNA repair protein radA signature 211 239 2.2E-88 T 20-04-2016 AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 PRINTS PR01874 DNA repair protein radA signature 121 138 2.2E-88 T 20-04-2016 AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 PRINTS PR01874 DNA repair protein radA signature 79 107 2.2E-88 T 20-04-2016 AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 PRINTS PR01874 DNA repair protein radA signature 321 344 2.2E-88 T 20-04-2016 AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 PRINTS PR01874 DNA repair protein radA signature 172 196 2.2E-88 T 20-04-2016 AMC99_RS05640 55dee246e04c99e843924c6c89af008c 455 PRINTS PR01874 DNA repair protein radA signature 246 272 2.2E-88 T 20-04-2016 AMC99_RS09425 7b168fe39b630b2fd704cfec77532d90 158 SMART SM00347 35 135 1.5E-12 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS09425 7b168fe39b630b2fd704cfec77532d90 158 ProSitePatterns PS01117 MarR-type HTH domain signature. 74 108 - T 20-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site AMC99_RS09425 7b168fe39b630b2fd704cfec77532d90 158 Gene3D G3DSA:1.10.10.10 7 150 2.7E-39 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS09425 7b168fe39b630b2fd704cfec77532d90 158 Pfam PF12802 MarR family 41 99 4.3E-15 T 20-04-2016 AMC99_RS09425 7b168fe39b630b2fd704cfec77532d90 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 125 145 1.6E-10 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS09425 7b168fe39b630b2fd704cfec77532d90 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 1.6E-10 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS09425 7b168fe39b630b2fd704cfec77532d90 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 1.6E-10 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS09425 7b168fe39b630b2fd704cfec77532d90 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 1.6E-10 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS09425 7b168fe39b630b2fd704cfec77532d90 158 PANTHER PTHR33164 13 158 1.2E-24 T 20-04-2016 AMC99_RS09425 7b168fe39b630b2fd704cfec77532d90 158 SUPERFAMILY SSF46785 12 149 2.2E-33 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS04405 a22bb9452aa3c116c5d201baa31b1454 132 SMART SM00448 13 126 2.2E-33 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS04405 a22bb9452aa3c116c5d201baa31b1454 132 Pfam PF00072 Response regulator receiver domain 16 126 1.6E-28 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS04405 a22bb9452aa3c116c5d201baa31b1454 132 PANTHER PTHR26402 13 129 1.1E-35 T 20-04-2016 AMC99_RS04405 a22bb9452aa3c116c5d201baa31b1454 132 Gene3D G3DSA:3.40.50.2300 12 129 2.7E-37 T 20-04-2016 AMC99_RS04405 a22bb9452aa3c116c5d201baa31b1454 132 SUPERFAMILY SSF52172 13 129 1.85E-36 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS07035 b2ab44df8793fd836b99cf13fde98b29 404 PANTHER PTHR10314 16 400 3.1E-232 T 20-04-2016 AMC99_RS07035 b2ab44df8793fd836b99cf13fde98b29 404 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 63 387 1.1E-47 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_RS07035 b2ab44df8793fd836b99cf13fde98b29 404 Gene3D G3DSA:3.40.50.1100 109 186 3.5E-21 T 20-04-2016 AMC99_RS07035 b2ab44df8793fd836b99cf13fde98b29 404 SUPERFAMILY SSF53686 12 398 1.06E-148 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_RS07035 b2ab44df8793fd836b99cf13fde98b29 404 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 16 399 5.7E-190 T 20-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMC99_RS07035 b2ab44df8793fd836b99cf13fde98b29 404 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 11 400 51.926 T 20-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMC99_RS07035 b2ab44df8793fd836b99cf13fde98b29 404 PIRSF PIRSF001413 2 404 1.7E-158 T 20-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMC99_RS07035 b2ab44df8793fd836b99cf13fde98b29 404 PANTHER PTHR10314:SF3 16 400 3.1E-232 T 20-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMC99_RS07035 b2ab44df8793fd836b99cf13fde98b29 404 Gene3D G3DSA:3.40.50.1100 187 401 8.8E-93 T 20-04-2016 AMC99_RS07035 b2ab44df8793fd836b99cf13fde98b29 404 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 90 104 - T 20-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.4E-25 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.4E-25 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.4E-25 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.4E-25 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.4E-25 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 SUPERFAMILY SSF50447 205 303 3.34E-30 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 Gene3D G3DSA:3.40.50.300 4 213 1.5E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 Gene3D G3DSA:2.40.30.10 214 300 7.3E-36 T 20-04-2016 AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 SUPERFAMILY SSF52540 3 216 6.79E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 58.985 T 20-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.2E-17 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 PANTHER PTHR23115:SF112 1 396 3.2E-242 T 20-04-2016 AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.6E-221 T 20-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 PANTHER PTHR23115 1 396 3.2E-242 T 20-04-2016 AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 Gene3D G3DSA:2.40.30.10 302 395 1.8E-45 T 20-04-2016 AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.1E-57 T 20-04-2016 AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 SUPERFAMILY SSF50465 304 396 9.35E-35 T 20-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 6.0E-32 T 20-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMC99_RS07555 9892c99ab4e9412f8ac90cc342a17e18 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 145 7.7E-16 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_RS00020 c2fc8308848ba7600e255ad5e5c15827 192 PANTHER PTHR36122:SF1 1 182 1.5E-42 T 20-04-2016 AMC99_RS00020 c2fc8308848ba7600e255ad5e5c15827 192 PANTHER PTHR36122 1 182 1.5E-42 T 20-04-2016 AMC99_RS00020 c2fc8308848ba7600e255ad5e5c15827 192 Pfam PF04973 Nicotinamide mononucleotide transporter 2 181 5.3E-48 T 20-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AMC99_RS00020 c2fc8308848ba7600e255ad5e5c15827 192 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 2 184 1.4E-27 T 20-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AMC99_RS07885 6d1455e3ffd44d20a7abcfe19c963ad0 321 SUPERFAMILY SSF52540 108 292 3.04E-33 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07885 6d1455e3ffd44d20a7abcfe19c963ad0 321 Pfam PF02562 PhoH-like protein 113 317 1.2E-89 T 20-04-2016 IPR003714 PhoH-like protein GO:0005524 AMC99_RS07885 6d1455e3ffd44d20a7abcfe19c963ad0 321 PANTHER PTHR30473 1 317 8.4E-138 T 20-04-2016 AMC99_RS07885 6d1455e3ffd44d20a7abcfe19c963ad0 321 Gene3D G3DSA:3.40.50.300 111 317 8.1E-82 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07885 6d1455e3ffd44d20a7abcfe19c963ad0 321 PANTHER PTHR30473:SF1 1 317 8.4E-138 T 20-04-2016 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 20-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 1.0E-83 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 1.0E-83 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.0E-83 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 1.0E-83 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 1.0E-83 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.0E-83 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.0E-83 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 1.0E-83 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 Gene3D G3DSA:3.40.50.1980 27 240 8.1E-78 T 20-04-2016 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 3.6E-157 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 SUPERFAMILY SSF53720 14 428 4.9E-87 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 428 40.903 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 PIRSF PIRSF000099 3 429 4.9E-158 T 20-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 PANTHER PTHR21256 1 429 4.5E-188 T 20-04-2016 AMC99_RS02610 1b2dc2b2d0358fff38b8e9133c7600ae 429 Pfam PF00815 Histidinol dehydrogenase 23 428 7.5E-165 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 SMART SM00357 55 121 1.4E-13 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 SMART SM00382 173 358 5.7E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 PANTHER PTHR15184:SF34 23 421 1.8E-184 T 20-04-2016 AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 SUPERFAMILY SSF68912 1 46 1.26E-11 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 Gene3D G3DSA:2.40.50.140 52 119 2.7E-32 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 421 1.1E-206 T 20-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 SUPERFAMILY SSF50249 52 128 3.71E-27 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 162 366 1.1E-21 T 20-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 Gene3D G3DSA:3.40.50.300 133 420 2.8E-105 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 421 237.648 T 20-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 PANTHER PTHR15184 23 421 1.8E-184 T 20-04-2016 AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 Pfam PF07498 Rho termination factor, N-terminal domain 5 46 1.4E-15 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 SUPERFAMILY SSF52540 94 374 1.57E-65 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 SMART SM00959 5 47 7.5E-16 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 Gene3D G3DSA:1.10.720.10 1 47 1.3E-21 T 20-04-2016 AMC99_RS12405 cc01ea39eba0bc9d18ee444b29d066cc 421 Pfam PF07497 Rho termination factor, RNA-binding domain 56 128 1.4E-29 T 20-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 AMC99_RS06775 8adcb3e31fe79acad8913cf02d07f0ff 475 SUPERFAMILY SSF53623 113 321 5.36E-40 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS06775 8adcb3e31fe79acad8913cf02d07f0ff 475 Gene3D G3DSA:3.90.190.20 326 460 4.4E-29 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS06775 8adcb3e31fe79acad8913cf02d07f0ff 475 SUPERFAMILY SSF51984 14 100 2.55E-14 T 20-04-2016 AMC99_RS06775 8adcb3e31fe79acad8913cf02d07f0ff 475 Pfam PF08245 Mur ligase middle domain 123 302 1.3E-16 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS06775 8adcb3e31fe79acad8913cf02d07f0ff 475 PANTHER PTHR23135:SF5 7 458 1.1E-79 T 20-04-2016 AMC99_RS06775 8adcb3e31fe79acad8913cf02d07f0ff 475 Gene3D G3DSA:3.40.1190.10 118 325 5.5E-44 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS06775 8adcb3e31fe79acad8913cf02d07f0ff 475 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 374 3.0E-8 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS06775 8adcb3e31fe79acad8913cf02d07f0ff 475 SUPERFAMILY SSF53244 323 463 2.35E-28 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS06775 8adcb3e31fe79acad8913cf02d07f0ff 475 Pfam PF01225 Mur ligase family, catalytic domain 17 108 2.3E-8 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS06775 8adcb3e31fe79acad8913cf02d07f0ff 475 Gene3D G3DSA:3.40.50.720 13 100 9.5E-16 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06775 8adcb3e31fe79acad8913cf02d07f0ff 475 PANTHER PTHR23135 7 458 1.1E-79 T 20-04-2016 AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 PANTHER PTHR30575:SF5 123 347 1.3E-121 T 20-04-2016 AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 PANTHER PTHR30575:SF5 30 106 1.3E-121 T 20-04-2016 AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 PANTHER PTHR30575:SF5 368 460 1.3E-121 T 20-04-2016 AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 Gene3D G3DSA:3.30.70.360 206 310 1.8E-23 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 PIRSF PIRSF037227 20 474 1.3E-161 T 20-04-2016 IPR017145 Aminobenzoyl-glutamate utilization protein B KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 40 404 1.1E-70 T 20-04-2016 IPR017439 Amidohydrolase GO:0016787 AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 Pfam PF01546 Peptidase family M20/M25/M40 97 337 3.5E-9 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 SUPERFAMILY SSF55031 206 312 6.54E-22 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 PANTHER PTHR30575 123 347 1.3E-121 T 20-04-2016 AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 PANTHER PTHR30575 30 106 1.3E-121 T 20-04-2016 AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 PANTHER PTHR30575 368 460 1.3E-121 T 20-04-2016 AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 Pfam PF07687 Peptidase dimerisation domain 205 296 1.8E-7 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 Gene3D G3DSA:3.40.630.10 25 204 5.5E-57 T 20-04-2016 AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 Gene3D G3DSA:3.40.630.10 313 450 5.5E-57 T 20-04-2016 AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 SUPERFAMILY SSF53187 316 345 2.63E-53 T 20-04-2016 AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 SUPERFAMILY SSF53187 29 217 2.63E-53 T 20-04-2016 AMC99_RS13245 2fcf79d232ab71c2641e44639924c6db 474 SUPERFAMILY SSF53187 375 441 2.63E-53 T 20-04-2016 AMC99_RS13010 8709c6c4f4c43747c9e2c4f30a03e6c3 178 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 7 174 9.2E-60 T 20-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 AMC99_RS13010 8709c6c4f4c43747c9e2c4f30a03e6c3 178 SUPERFAMILY SSF53271 4 174 3.41E-50 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like AMC99_RS13010 8709c6c4f4c43747c9e2c4f30a03e6c3 178 PANTHER PTHR11776:SF0 4 177 2.9E-69 T 20-04-2016 AMC99_RS13010 8709c6c4f4c43747c9e2c4f30a03e6c3 178 Pfam PF00156 Phosphoribosyl transferase domain 51 144 3.8E-11 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMC99_RS13010 8709c6c4f4c43747c9e2c4f30a03e6c3 178 Gene3D G3DSA:3.40.50.2020 4 176 5.2E-61 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like AMC99_RS13010 8709c6c4f4c43747c9e2c4f30a03e6c3 178 PANTHER PTHR11776 4 177 2.9E-69 T 20-04-2016 AMC99_RS13010 8709c6c4f4c43747c9e2c4f30a03e6c3 178 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 6 175 34.317 T 20-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 AMC99_RS06440 1b17fad83700cf21e24be4245f135261 1162 SMART SM00481 7 74 7.5E-15 T 20-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AMC99_RS06440 1b17fad83700cf21e24be4245f135261 1162 Pfam PF02811 PHP domain 9 172 6.5E-31 T 20-04-2016 IPR004013 PHP domain GO:0003824 AMC99_RS06440 1b17fad83700cf21e24be4245f135261 1162 Gene3D G3DSA:1.10.150.280 825 874 9.5E-7 T 20-04-2016 AMC99_RS06440 1b17fad83700cf21e24be4245f135261 1162 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 290 719 1.0E-168 T 20-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS06440 1b17fad83700cf21e24be4245f135261 1162 SUPERFAMILY SSF160975 828 867 9.02E-5 T 20-04-2016 AMC99_RS06440 1b17fad83700cf21e24be4245f135261 1162 Gene3D G3DSA:3.20.20.140 14 256 3.8E-12 T 20-04-2016 AMC99_RS06440 1b17fad83700cf21e24be4245f135261 1162 Pfam PF14579 Helix-hairpin-helix motif 800 892 2.3E-28 T 20-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS06440 1b17fad83700cf21e24be4245f135261 1162 PANTHER PTHR32294 4 1152 0.0 T 20-04-2016 AMC99_RS06440 1b17fad83700cf21e24be4245f135261 1162 PANTHER PTHR32294:SF0 4 1152 0.0 T 20-04-2016 AMC99_RS06440 1b17fad83700cf21e24be4245f135261 1162 SUPERFAMILY SSF89550 15 262 2.16E-6 T 20-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 AMC99_RS06440 1b17fad83700cf21e24be4245f135261 1162 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1027 0.0 T 20-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS13620 ab5fff0c53641abf3c732627773d4b93 341 PRINTS PR00118 Beta-lactamase class A signature 91 108 8.3E-16 T 20-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_RS13620 ab5fff0c53641abf3c732627773d4b93 341 PRINTS PR00118 Beta-lactamase class A signature 204 229 8.3E-16 T 20-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_RS13620 ab5fff0c53641abf3c732627773d4b93 341 PRINTS PR00118 Beta-lactamase class A signature 60 84 8.3E-16 T 20-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_RS13620 ab5fff0c53641abf3c732627773d4b93 341 PRINTS PR00118 Beta-lactamase class A signature 257 272 8.3E-16 T 20-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_RS13620 ab5fff0c53641abf3c732627773d4b93 341 SUPERFAMILY SSF56601 56 322 4.47E-56 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS13620 ab5fff0c53641abf3c732627773d4b93 341 Pfam PF13354 Beta-lactamase enzyme family 79 296 1.1E-38 T 20-04-2016 AMC99_RS13620 ab5fff0c53641abf3c732627773d4b93 341 PANTHER PTHR35333 43 331 1.4E-51 T 20-04-2016 AMC99_RS13620 ab5fff0c53641abf3c732627773d4b93 341 ProSitePatterns PS00146 Beta-lactamase class-A active site. 93 108 - T 20-04-2016 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 AMC99_RS13620 ab5fff0c53641abf3c732627773d4b93 341 Gene3D G3DSA:3.40.710.10 56 321 9.8E-73 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS02900 080f235b880e0d252260158fd4f61534 288 PANTHER PTHR10992 1 210 2.0E-33 T 20-04-2016 AMC99_RS02900 080f235b880e0d252260158fd4f61534 288 PANTHER PTHR10992 228 286 2.0E-33 T 20-04-2016 AMC99_RS02900 080f235b880e0d252260158fd4f61534 288 SUPERFAMILY SSF53474 4 279 5.4E-48 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS02900 080f235b880e0d252260158fd4f61534 288 Gene3D G3DSA:3.40.50.1820 7 286 6.3E-71 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS02900 080f235b880e0d252260158fd4f61534 288 Pfam PF12697 Alpha/beta hydrolase family 35 279 3.0E-18 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS11505 9f89f178d8292ad260467ff26badba62 409 SUPERFAMILY SSF89796 3 402 9.03E-69 T 20-04-2016 IPR023606 CoA-transferase family III domain AMC99_RS11505 9f89f178d8292ad260467ff26badba62 409 Gene3D G3DSA:3.40.50.10540 4 211 7.1E-54 T 20-04-2016 IPR023606 CoA-transferase family III domain AMC99_RS11505 9f89f178d8292ad260467ff26badba62 409 Gene3D G3DSA:3.40.50.10540 296 404 7.1E-54 T 20-04-2016 IPR023606 CoA-transferase family III domain AMC99_RS11505 9f89f178d8292ad260467ff26badba62 409 Pfam PF02515 CoA-transferase family III 5 377 4.4E-51 T 20-04-2016 IPR003673 CoA-transferase family III GO:0003824 AMC99_RS03920 e946bba3b37746f5b6a68c8d8f2ae961 391 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 17 129 1.5E-33 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS03920 e946bba3b37746f5b6a68c8d8f2ae961 391 Gene3D G3DSA:1.20.140.10 239 390 2.0E-37 T 20-04-2016 AMC99_RS03920 e946bba3b37746f5b6a68c8d8f2ae961 391 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_RS03920 e946bba3b37746f5b6a68c8d8f2ae961 391 SUPERFAMILY SSF47203 242 389 2.58E-40 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS03920 e946bba3b37746f5b6a68c8d8f2ae961 391 Gene3D G3DSA:1.10.540.10 3 131 5.0E-41 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS03920 e946bba3b37746f5b6a68c8d8f2ae961 391 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 226 6.7E-20 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS03920 e946bba3b37746f5b6a68c8d8f2ae961 391 Gene3D G3DSA:2.40.110.10 132 236 8.7E-32 T 20-04-2016 AMC99_RS03920 e946bba3b37746f5b6a68c8d8f2ae961 391 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 385 2.9E-24 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS03920 e946bba3b37746f5b6a68c8d8f2ae961 391 PANTHER PTHR10909:SF307 4 391 2.4E-255 T 20-04-2016 AMC99_RS03920 e946bba3b37746f5b6a68c8d8f2ae961 391 SUPERFAMILY SSF56645 4 238 4.32E-77 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS03920 e946bba3b37746f5b6a68c8d8f2ae961 391 PANTHER PTHR10909 4 391 2.4E-255 T 20-04-2016 AMC99_RS03920 e946bba3b37746f5b6a68c8d8f2ae961 391 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 135 147 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_RS09950 dfc37994a1eac87873bab9a6dca87176 205 Pfam PF03734 L,D-transpeptidase catalytic domain 85 192 1.9E-16 T 20-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMC99_RS09950 dfc37994a1eac87873bab9a6dca87176 205 PANTHER PTHR30582:SF2 69 197 3.4E-26 T 20-04-2016 AMC99_RS09950 dfc37994a1eac87873bab9a6dca87176 205 SUPERFAMILY SSF141523 82 192 1.44E-27 T 20-04-2016 AMC99_RS09950 dfc37994a1eac87873bab9a6dca87176 205 PANTHER PTHR30582 69 197 3.4E-26 T 20-04-2016 AMC99_RS09950 dfc37994a1eac87873bab9a6dca87176 205 Gene3D G3DSA:2.40.440.10 84 193 9.4E-20 T 20-04-2016 AMC99_RS06340 069fc805f8e48f1d20dffedd4b91b5bb 508 TIGRFAM TIGR03098 ligase_PEP_1: acyl-CoA ligase (AMP-forming), exosortase A-associated 22 504 2.6E-197 T 20-04-2016 IPR017529 Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated AMC99_RS06340 069fc805f8e48f1d20dffedd4b91b5bb 508 Gene3D G3DSA:3.40.50.980 165 310 2.9E-34 T 20-04-2016 AMC99_RS06340 069fc805f8e48f1d20dffedd4b91b5bb 508 Gene3D G3DSA:3.40.50.980 23 164 1.4E-28 T 20-04-2016 AMC99_RS06340 069fc805f8e48f1d20dffedd4b91b5bb 508 SUPERFAMILY SSF56801 23 506 1.07E-120 T 20-04-2016 AMC99_RS06340 069fc805f8e48f1d20dffedd4b91b5bb 508 PANTHER PTHR24096 36 505 9.9E-95 T 20-04-2016 AMC99_RS06340 069fc805f8e48f1d20dffedd4b91b5bb 508 Gene3D G3DSA:3.30.300.30 407 505 3.5E-24 T 20-04-2016 AMC99_RS06340 069fc805f8e48f1d20dffedd4b91b5bb 508 Pfam PF00501 AMP-binding enzyme 25 412 1.7E-76 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMC99_RS06340 069fc805f8e48f1d20dffedd4b91b5bb 508 Pfam PF13193 AMP-binding enzyme C-terminal domain 421 496 1.8E-11 T 20-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMC99_RS06340 069fc805f8e48f1d20dffedd4b91b5bb 508 ProSitePatterns PS00455 Putative AMP-binding domain signature. 159 170 - T 20-04-2016 IPR020845 AMP-binding, conserved site AMC99_RS06340 069fc805f8e48f1d20dffedd4b91b5bb 508 Gene3D G3DSA:2.30.38.10 323 405 3.5E-18 T 20-04-2016 AMC99_RS04135 7414438b5e2c54fb166cb8113748a347 157 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 144 1.0E-32 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMC99_RS04135 7414438b5e2c54fb166cb8113748a347 157 PANTHER PTHR30266 1 144 3.1E-38 T 20-04-2016 AMC99_RS04135 7414438b5e2c54fb166cb8113748a347 157 PANTHER PTHR30266:SF2 1 144 3.1E-38 T 20-04-2016 AMC99_RS04135 7414438b5e2c54fb166cb8113748a347 157 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 147 24.259 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMC99_RS04135 7414438b5e2c54fb166cb8113748a347 157 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 144 2.3E-41 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMC99_RS04135 7414438b5e2c54fb166cb8113748a347 157 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 103 112 9.4E-9 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMC99_RS04135 7414438b5e2c54fb166cb8113748a347 157 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 94 102 9.4E-9 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMC99_RS04135 7414438b5e2c54fb166cb8113748a347 157 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 9.4E-9 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMC99_RS04135 7414438b5e2c54fb166cb8113748a347 157 SUPERFAMILY SSF81330 11 139 1.96E-31 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMC99_RS00670 204282fb9233c9e22a44f481c2f39835 270 Pfam PF00639 PPIC-type PPIASE domain 119 211 1.0E-17 T 20-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AMC99_RS00670 204282fb9233c9e22a44f481c2f39835 270 SUPERFAMILY SSF109998 7 126 1.49E-9 T 20-04-2016 IPR027304 Trigger factor/SurA domain AMC99_RS00670 204282fb9233c9e22a44f481c2f39835 270 PANTHER PTHR10657 94 265 6.5E-26 T 20-04-2016 AMC99_RS00670 204282fb9233c9e22a44f481c2f39835 270 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 153 173 - T 20-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AMC99_RS00670 204282fb9233c9e22a44f481c2f39835 270 Gene3D G3DSA:3.10.50.40 105 236 1.0E-27 T 20-04-2016 AMC99_RS00670 204282fb9233c9e22a44f481c2f39835 270 SUPERFAMILY SSF54534 105 211 2.88E-20 T 20-04-2016 AMC99_RS08035 4306857c010d8ecd2b0bb48ae9fa9c2f 482 SMART SM00840 367 422 0.009 T 20-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AMC99_RS08035 4306857c010d8ecd2b0bb48ae9fa9c2f 482 SUPERFAMILY SSF52374 6 332 2.82E-64 T 20-04-2016 AMC99_RS08035 4306857c010d8ecd2b0bb48ae9fa9c2f 482 Gene3D G3DSA:1.20.120.640 329 389 1.0E-10 T 20-04-2016 AMC99_RS08035 4306857c010d8ecd2b0bb48ae9fa9c2f 482 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 19 332 8.7E-77 T 20-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AMC99_RS08035 4306857c010d8ecd2b0bb48ae9fa9c2f 482 Gene3D G3DSA:3.40.50.620 24 327 6.0E-69 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS08035 4306857c010d8ecd2b0bb48ae9fa9c2f 482 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 235 256 3.0E-21 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMC99_RS08035 4306857c010d8ecd2b0bb48ae9fa9c2f 482 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 204 222 3.0E-21 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMC99_RS08035 4306857c010d8ecd2b0bb48ae9fa9c2f 482 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 65 74 3.0E-21 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMC99_RS08035 4306857c010d8ecd2b0bb48ae9fa9c2f 482 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 29 40 3.0E-21 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMC99_RS08035 4306857c010d8ecd2b0bb48ae9fa9c2f 482 PANTHER PTHR10890 6 481 8.2E-131 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMC99_RS08035 4306857c010d8ecd2b0bb48ae9fa9c2f 482 SUPERFAMILY SSF47323 355 473 7.85E-25 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS08035 4306857c010d8ecd2b0bb48ae9fa9c2f 482 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 6 472 6.9E-113 T 20-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 AMC99_RS08035 4306857c010d8ecd2b0bb48ae9fa9c2f 482 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 6 481 31.739 T 20-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 AMC99_RS02330 9fa00c4b6779bc68ceaf218785308dfe 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 5.1E-42 T 20-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AMC99_RS02330 9fa00c4b6779bc68ceaf218785308dfe 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 5.3E-124 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMC99_RS02330 9fa00c4b6779bc68ceaf218785308dfe 393 Gene3D G3DSA:3.40.47.10 146 184 2.4E-59 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS02330 9fa00c4b6779bc68ceaf218785308dfe 393 Gene3D G3DSA:3.40.47.10 277 392 2.4E-59 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS02330 9fa00c4b6779bc68ceaf218785308dfe 393 Pfam PF00108 Thiolase, N-terminal domain 5 262 3.7E-58 T 20-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AMC99_RS02330 9fa00c4b6779bc68ceaf218785308dfe 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 20-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AMC99_RS02330 9fa00c4b6779bc68ceaf218785308dfe 393 SUPERFAMILY SSF53901 1 267 4.47E-66 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS02330 9fa00c4b6779bc68ceaf218785308dfe 393 Gene3D G3DSA:3.40.47.10 185 275 6.2E-57 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS02330 9fa00c4b6779bc68ceaf218785308dfe 393 Gene3D G3DSA:3.40.47.10 3 125 6.2E-57 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS02330 9fa00c4b6779bc68ceaf218785308dfe 393 SUPERFAMILY SSF53901 271 392 1.78E-40 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS02330 9fa00c4b6779bc68ceaf218785308dfe 393 PIRSF PIRSF000429 1 393 4.5E-114 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMC99_RS02330 9fa00c4b6779bc68ceaf218785308dfe 393 PANTHER PTHR18919 1 393 1.1E-212 T 20-04-2016 AMC99_RS02330 9fa00c4b6779bc68ceaf218785308dfe 393 PANTHER PTHR18919:SF14 1 393 1.1E-212 T 20-04-2016 AMC99_RS02315 29ab774f507ecfc9fa25e2e7ee8877b8 438 SUPERFAMILY SSF103473 17 425 1.01E-66 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS02315 29ab774f507ecfc9fa25e2e7ee8877b8 438 Gene3D G3DSA:1.20.1250.20 24 210 3.6E-37 T 20-04-2016 AMC99_RS02315 29ab774f507ecfc9fa25e2e7ee8877b8 438 Pfam PF07690 Major Facilitator Superfamily 33 384 6.9E-45 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS02315 29ab774f507ecfc9fa25e2e7ee8877b8 438 PANTHER PTHR23505 1 421 3.0E-73 T 20-04-2016 AMC99_RS02315 29ab774f507ecfc9fa25e2e7ee8877b8 438 Gene3D G3DSA:1.20.1250.20 226 423 3.5E-13 T 20-04-2016 AMC99_RS05650 646e79f62a6822d22b10a8090a129cd9 144 Gene3D G3DSA:3.90.1010.10 31 138 7.2E-7 T 20-04-2016 AMC99_RS05650 646e79f62a6822d22b10a8090a129cd9 144 SUPERFAMILY SSF82649 6 138 2.07E-24 T 20-04-2016 AMC99_RS07480 4887b767e4125afe6a16c8303a779f9d 101 SUPERFAMILY SSF57716 2 101 3.92E-34 T 20-04-2016 AMC99_RS07480 4887b767e4125afe6a16c8303a779f9d 101 PANTHER PTHR19836 1 101 1.6E-49 T 20-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07480 4887b767e4125afe6a16c8303a779f9d 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.864 T 20-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid AMC99_RS07480 4887b767e4125afe6a16c8303a779f9d 101 Gene3D G3DSA:4.10.830.10 44 101 4.2E-28 T 20-04-2016 AMC99_RS07480 4887b767e4125afe6a16c8303a779f9d 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 4.7E-24 T 20-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS11500 82d4d0d7dd67129e36de9278d3aef450 392 Gene3D G3DSA:1.20.140.10 223 387 1.8E-61 T 20-04-2016 AMC99_RS11500 82d4d0d7dd67129e36de9278d3aef450 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 120 2.9E-23 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS11500 82d4d0d7dd67129e36de9278d3aef450 392 PANTHER PTHR10909 8 390 2.8E-134 T 20-04-2016 AMC99_RS11500 82d4d0d7dd67129e36de9278d3aef450 392 Gene3D G3DSA:2.40.110.10 122 222 2.5E-38 T 20-04-2016 AMC99_RS11500 82d4d0d7dd67129e36de9278d3aef450 392 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 222 2.3E-27 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS11500 82d4d0d7dd67129e36de9278d3aef450 392 SUPERFAMILY SSF56645 9 248 1.19E-71 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS11500 82d4d0d7dd67129e36de9278d3aef450 392 Gene3D G3DSA:1.10.540.10 8 121 1.1E-26 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS11500 82d4d0d7dd67129e36de9278d3aef450 392 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 342 361 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_RS11500 82d4d0d7dd67129e36de9278d3aef450 392 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 384 4.6E-46 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS11500 82d4d0d7dd67129e36de9278d3aef450 392 PIRSF PIRSF016578 6 385 3.4E-26 T 20-04-2016 AMC99_RS11500 82d4d0d7dd67129e36de9278d3aef450 392 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_RS11500 82d4d0d7dd67129e36de9278d3aef450 392 SUPERFAMILY SSF47203 233 387 1.21E-50 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 SUPERFAMILY SSF49503 442 600 1.92E-37 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 11 600 7.7E-230 T 20-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 Pfam PF07732 Multicopper oxidase 69 176 2.1E-34 T 20-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 PANTHER PTHR11709 253 370 8.6E-85 T 20-04-2016 AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 SUPERFAMILY SSF49503 180 378 1.77E-48 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 ProSitePatterns PS00079 Multicopper oxidases signature 1. 578 598 - T 20-04-2016 IPR033138 Multicopper oxidases, conserved site AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 Pfam PF07731 Multicopper oxidase 483 602 1.7E-26 T 20-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 ProSitePatterns PS00080 Multicopper oxidases signature 2. 583 594 - T 20-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 PANTHER PTHR11709:SF33 253 370 8.6E-85 T 20-04-2016 AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 Gene3D G3DSA:2.60.40.420 56 178 5.7E-29 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 38 0.0013 T 20-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 PANTHER PTHR11709:SF33 70 220 8.6E-85 T 20-04-2016 AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 PANTHER PTHR11709:SF33 460 600 8.6E-85 T 20-04-2016 AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 Pfam PF00394 Multicopper oxidase 186 352 4.9E-21 T 20-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 Gene3D G3DSA:2.60.40.420 477 604 2.0E-40 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 SUPERFAMILY SSF49503 59 208 1.25E-35 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 PANTHER PTHR11709 70 220 8.6E-85 T 20-04-2016 AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 PANTHER PTHR11709 460 600 8.6E-85 T 20-04-2016 AMC99_RS00465 82e8fd94fdea9d9aa3820f8365a67bd1 615 Gene3D G3DSA:2.60.40.420 183 378 6.6E-44 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS13710 94f8a9b9b6ad0b8237b820affeb2045c 376 PANTHER PTHR22935 3 361 1.7E-86 T 20-04-2016 AMC99_RS13710 94f8a9b9b6ad0b8237b820affeb2045c 376 SUPERFAMILY SSF56601 3 370 1.2E-85 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS13710 94f8a9b9b6ad0b8237b820affeb2045c 376 Pfam PF00144 Beta-lactamase 5 362 4.7E-60 T 20-04-2016 IPR001466 Beta-lactamase-related AMC99_RS13710 94f8a9b9b6ad0b8237b820affeb2045c 376 Gene3D G3DSA:3.40.710.10 4 362 1.6E-79 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS13710 94f8a9b9b6ad0b8237b820affeb2045c 376 PANTHER PTHR22935:SF77 3 361 1.7E-86 T 20-04-2016 AMC99_RS09675 ce1c349e11001257c1bb7e8dd704ddfd 231 PIRSF PIRSF029033 6 231 6.0E-48 T 20-04-2016 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein AMC99_RS09675 ce1c349e11001257c1bb7e8dd704ddfd 231 Pfam PF04402 Protein of unknown function (DUF541) 37 195 6.3E-22 T 20-04-2016 IPR007497 Protein of unknown function DUF541 AMC99_RS02130 8bf3871a35f4da7a0668a1b75d332cad 150 Gene3D G3DSA:3.10.129.10 14 145 9.8E-42 T 20-04-2016 IPR029069 HotDog domain AMC99_RS02130 8bf3871a35f4da7a0668a1b75d332cad 150 PIRSF PIRSF003230 10 149 1.0E-42 T 20-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AMC99_RS02130 8bf3871a35f4da7a0668a1b75d332cad 150 PANTHER PTHR31793 12 146 2.2E-31 T 20-04-2016 AMC99_RS02130 8bf3871a35f4da7a0668a1b75d332cad 150 SUPERFAMILY SSF54637 14 143 8.88E-37 T 20-04-2016 IPR029069 HotDog domain AMC99_RS02130 8bf3871a35f4da7a0668a1b75d332cad 150 Pfam PF03061 Thioesterase superfamily 31 115 3.1E-14 T 20-04-2016 IPR006683 Thioesterase domain AMC99_RS02130 8bf3871a35f4da7a0668a1b75d332cad 150 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 20 121 6.4E-23 T 20-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AMC99_RS02130 8bf3871a35f4da7a0668a1b75d332cad 150 PANTHER PTHR31793:SF9 12 146 2.2E-31 T 20-04-2016 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 Gene3D G3DSA:1.10.730.10 463 581 8.8E-37 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 Pfam PF00750 tRNA synthetases class I (R) 117 423 5.3E-16 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 Gene3D G3DSA:3.30.1360.70 13 117 2.9E-30 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 Hamap MF_00123 Arginine--tRNA ligase [argS]. 9 581 24.631 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 142 158 5.9E-23 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 166 179 5.9E-23 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 325 346 5.9E-23 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 127 142 5.9E-23 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 Gene3D G3DSA:3.40.50.620 121 462 2.4E-90 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 SUPERFAMILY SSF52374 122 469 1.32E-78 T 20-04-2016 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 Pfam PF05746 DALR anticodon binding domain 458 581 2.9E-33 T 20-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 SUPERFAMILY SSF55190 13 118 3.27E-24 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 137 146 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 SMART SM00836 458 581 3.4E-57 T 20-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 32 581 1.4E-112 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 14 98 5.8E-24 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 SUPERFAMILY SSF47323 452 581 3.47E-35 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 SMART SM01016 9 98 1.8E-37 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 PANTHER PTHR11956 4 292 1.9E-183 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 PANTHER PTHR11956 313 581 1.9E-183 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 PANTHER PTHR11956:SF6 4 292 1.9E-183 T 20-04-2016 AMC99_RS09355 9766de3ce075c1223b20e850648a670c 581 PANTHER PTHR11956:SF6 313 581 1.9E-183 T 20-04-2016 AMC99_RS04585 348501cf64f1e53f9b393a3414940ba7 204 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 81 97 - T 20-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMC99_RS04585 348501cf64f1e53f9b393a3414940ba7 204 Gene3D G3DSA:3.30.1130.10 77 201 5.9E-50 T 20-04-2016 AMC99_RS04585 348501cf64f1e53f9b393a3414940ba7 204 PANTHER PTHR11109 24 200 4.7E-85 T 20-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMC99_RS04585 348501cf64f1e53f9b393a3414940ba7 204 SUPERFAMILY SSF55620 20 202 3.34E-67 T 20-04-2016 AMC99_RS04585 348501cf64f1e53f9b393a3414940ba7 204 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 19 202 36.576 T 20-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMC99_RS04585 348501cf64f1e53f9b393a3414940ba7 204 Pfam PF01227 GTP cyclohydrolase I 24 200 3.8E-67 T 20-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMC99_RS04585 348501cf64f1e53f9b393a3414940ba7 204 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 24 200 1.9E-61 T 20-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMC99_RS04585 348501cf64f1e53f9b393a3414940ba7 204 Gene3D G3DSA:1.10.286.10 23 69 2.5E-20 T 20-04-2016 AMC99_RS04585 348501cf64f1e53f9b393a3414940ba7 204 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 129 139 - T 20-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMC99_RS05975 8931e840cb2d130ba2b55a9871828677 330 Gene3D G3DSA:1.20.970.10 10 64 1.3E-14 T 20-04-2016 AMC99_RS05975 8931e840cb2d130ba2b55a9871828677 330 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 2 328 33.127 T 20-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 AMC99_RS05975 8931e840cb2d130ba2b55a9871828677 330 SUPERFAMILY SSF52418 70 328 8.63E-84 T 20-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMC99_RS05975 8931e840cb2d130ba2b55a9871828677 330 SUPERFAMILY SSF47648 10 65 1.14E-12 T 20-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain AMC99_RS05975 8931e840cb2d130ba2b55a9871828677 330 PANTHER PTHR11922:SF5 6 12 4.9E-98 T 20-04-2016 AMC99_RS05975 8931e840cb2d130ba2b55a9871828677 330 PANTHER PTHR11922:SF5 60 328 4.9E-98 T 20-04-2016 AMC99_RS05975 8931e840cb2d130ba2b55a9871828677 330 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 327 4.0E-103 T 20-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 AMC99_RS05975 8931e840cb2d130ba2b55a9871828677 330 PANTHER PTHR11922 6 12 4.9E-98 T 20-04-2016 AMC99_RS05975 8931e840cb2d130ba2b55a9871828677 330 PANTHER PTHR11922 60 328 4.9E-98 T 20-04-2016 AMC99_RS05975 8931e840cb2d130ba2b55a9871828677 330 Gene3D G3DSA:3.40.1030.10 68 328 1.5E-97 T 20-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMC99_RS05975 8931e840cb2d130ba2b55a9871828677 330 Pfam PF00591 Glycosyl transferase family, a/b domain 69 318 3.3E-82 T 20-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMC99_RS05975 8931e840cb2d130ba2b55a9871828677 330 Pfam PF02885 Glycosyl transferase family, helical bundle domain 10 59 1.6E-10 T 20-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain AMC99_RS04555 05d7fea6bb9c4eb75c64c34c78fdb5c9 59 Pfam PF04964 Flp/Fap pilin component 8 52 1.5E-18 T 20-04-2016 IPR007047 Flp/Fap pilin component AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.2E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.2E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.2E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.2E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.2E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.2E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 PANTHER PTHR24322:SF330 15 146 7.5E-53 T 20-04-2016 AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 PANTHER PTHR24322:SF330 162 194 7.5E-53 T 20-04-2016 AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 PANTHER PTHR24322 15 146 7.5E-53 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 PANTHER PTHR24322 162 194 7.5E-53 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 SUPERFAMILY SSF51735 6 256 3.08E-80 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 Gene3D G3DSA:3.40.50.720 6 256 9.5E-85 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 9.3E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 9.3E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 9.3E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 254 5.3E-62 T 20-04-2016 AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 257 9.3E-120 T 20-04-2016 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 AMC99_RS02385 4515e1ad7fb5dfe9389fe5803bf2a843 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS09920 67d31d862faa832998ea451be8199cdc 267 SUPERFAMILY SSF54001 93 254 9.39E-28 T 20-04-2016 AMC99_RS09920 67d31d862faa832998ea451be8199cdc 267 PANTHER PTHR33490:SF3 49 251 9.1E-45 T 20-04-2016 AMC99_RS09920 67d31d862faa832998ea451be8199cdc 267 PANTHER PTHR33490 49 251 9.1E-45 T 20-04-2016 AMC99_RS09920 67d31d862faa832998ea451be8199cdc 267 Gene3D G3DSA:3.90.260.10 144 230 9.3E-9 T 20-04-2016 IPR002931 Transglutaminase-like AMC99_RS09920 67d31d862faa832998ea451be8199cdc 267 SMART SM00460 158 225 1.4E-9 T 20-04-2016 IPR002931 Transglutaminase-like AMC99_RS09920 67d31d862faa832998ea451be8199cdc 267 Pfam PF01841 Transglutaminase-like superfamily 129 222 9.0E-20 T 20-04-2016 IPR002931 Transglutaminase-like AMC99_RS05480 c878c37ecdb850d8cc98b772e087b696 414 PANTHER PTHR10804 164 396 3.4E-58 T 20-04-2016 AMC99_RS05480 c878c37ecdb850d8cc98b772e087b696 414 PANTHER PTHR10804 1 7 3.4E-58 T 20-04-2016 AMC99_RS05480 c878c37ecdb850d8cc98b772e087b696 414 Pfam PF00557 Metallopeptidase family M24 191 396 1.7E-48 T 20-04-2016 IPR000994 Peptidase M24, structural domain AMC99_RS05480 c878c37ecdb850d8cc98b772e087b696 414 Gene3D G3DSA:3.90.230.10 184 408 7.6E-56 T 20-04-2016 IPR000994 Peptidase M24, structural domain AMC99_RS05480 c878c37ecdb850d8cc98b772e087b696 414 SUPERFAMILY SSF55920 185 404 1.05E-59 T 20-04-2016 IPR000994 Peptidase M24, structural domain AMC99_RS05480 c878c37ecdb850d8cc98b772e087b696 414 SUPERFAMILY SSF53092 33 181 2.44E-27 T 20-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal AMC99_RS05480 c878c37ecdb850d8cc98b772e087b696 414 Gene3D G3DSA:3.40.350.10 32 181 3.7E-26 T 20-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMC99_RS05480 c878c37ecdb850d8cc98b772e087b696 414 PANTHER PTHR10804:SF86 164 396 3.4E-58 T 20-04-2016 AMC99_RS05480 c878c37ecdb850d8cc98b772e087b696 414 PANTHER PTHR10804:SF86 1 7 3.4E-58 T 20-04-2016 AMC99_RS05480 c878c37ecdb850d8cc98b772e087b696 414 Pfam PF01321 Creatinase/Prolidase N-terminal domain 49 183 2.8E-20 T 20-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 AMC99_RS02135 c75c02e5d3afcfe0b4300ae6536f8ab1 233 PANTHER PTHR30625:SF3 10 233 5.5E-55 T 20-04-2016 AMC99_RS02135 c75c02e5d3afcfe0b4300ae6536f8ab1 233 TIGRFAM TIGR02796 tolQ: protein TolQ 19 228 9.1E-76 T 20-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 AMC99_RS02135 c75c02e5d3afcfe0b4300ae6536f8ab1 233 PANTHER PTHR30625 10 233 5.5E-55 T 20-04-2016 AMC99_RS02135 c75c02e5d3afcfe0b4300ae6536f8ab1 233 Pfam PF01618 MotA/TolQ/ExbB proton channel family 87 216 3.3E-40 T 20-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 Pfam PF00330 Aconitase family (aconitate hydratase) 10 467 7.2E-156 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 ProSitePatterns PS01244 Aconitase family signature 2. 409 422 - T 20-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 Gene3D G3DSA:3.30.499.10 344 475 9.0E-61 T 20-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 Gene3D G3DSA:3.30.499.10 303 312 9.0E-61 T 20-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 5 475 1.5E-234 T 20-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 Gene3D G3DSA:3.30.499.10 3 170 7.1E-26 T 20-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 SUPERFAMILY SSF53732 4 475 8.76E-165 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 Gene3D G3DSA:3.40.1060.10 175 290 3.2E-38 T 20-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 352 363 2.4E-48 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 91 104 2.4E-48 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 295 309 2.4E-48 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 117 125 2.4E-48 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 204 217 2.4E-48 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 128 141 2.4E-48 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 409 422 2.4E-48 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 142 157 2.4E-48 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 218 231 2.4E-48 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 4 476 59.052 T 20-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 PANTHER PTHR11670:SF38 336 475 3.0E-284 T 20-04-2016 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 PANTHER PTHR11670:SF38 1 316 3.0E-284 T 20-04-2016 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 ProSitePatterns PS00450 Aconitase family signature 1. 348 364 - T 20-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 PANTHER PTHR11670 336 475 3.0E-284 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08315 6497279d5d124e3b45ce87f0f622176e 477 PANTHER PTHR11670 1 316 3.0E-284 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS01980 ac9f27311bdbd62c63e253204f5503b5 147 Pfam PF07885 Ion channel 77 141 5.3E-7 T 20-04-2016 IPR013099 Potassium channel domain AMC99_RS01980 ac9f27311bdbd62c63e253204f5503b5 147 SUPERFAMILY SSF81324 35 142 4.32E-9 T 20-04-2016 AMC99_RS01980 ac9f27311bdbd62c63e253204f5503b5 147 Gene3D G3DSA:1.10.287.70 27 143 4.6E-7 T 20-04-2016 AMC99_RS07170 40effe29db9a08de221eaf2cc422f016 160 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 20-04-2016 IPR020081 SsrA-binding protein, conserved site AMC99_RS07170 40effe29db9a08de221eaf2cc422f016 160 Pfam PF01668 SmpB protein 14 78 1.4E-29 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 AMC99_RS07170 40effe29db9a08de221eaf2cc422f016 160 Gene3D G3DSA:2.40.280.10 13 134 6.4E-52 T 20-04-2016 IPR023620 Small protein B AMC99_RS07170 40effe29db9a08de221eaf2cc422f016 160 PANTHER PTHR30308:SF2 2 160 1.5E-79 T 20-04-2016 AMC99_RS07170 40effe29db9a08de221eaf2cc422f016 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 73.117 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 AMC99_RS07170 40effe29db9a08de221eaf2cc422f016 160 PANTHER PTHR30308 2 160 1.5E-79 T 20-04-2016 AMC99_RS07170 40effe29db9a08de221eaf2cc422f016 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 7.0E-58 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 AMC99_RS07170 40effe29db9a08de221eaf2cc422f016 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 156 3.3E-56 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 AMC99_RS07170 40effe29db9a08de221eaf2cc422f016 160 SUPERFAMILY SSF74982 11 139 2.62E-50 T 20-04-2016 IPR023620 Small protein B AMC99_RS13360 7a7b471763fcdba3dd9c507914f60133 123 Pfam PF00072 Response regulator receiver domain 5 116 3.9E-22 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS13360 7a7b471763fcdba3dd9c507914f60133 123 PANTHER PTHR26402 3 120 2.7E-32 T 20-04-2016 AMC99_RS13360 7a7b471763fcdba3dd9c507914f60133 123 Gene3D G3DSA:3.40.50.2300 3 120 1.0E-34 T 20-04-2016 AMC99_RS13360 7a7b471763fcdba3dd9c507914f60133 123 SUPERFAMILY SSF52172 3 120 1.31E-34 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS13360 7a7b471763fcdba3dd9c507914f60133 123 SMART SM00448 3 116 7.2E-30 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS00100 e244dc8033d1ea3e9448f029dba5c47e 332 SUPERFAMILY SSF117892 49 183 2.22E-42 T 20-04-2016 IPR001107 Band 7 domain AMC99_RS00100 e244dc8033d1ea3e9448f029dba5c47e 332 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 20-04-2016 IPR018080 Band 7/stomatin-like, conserved site AMC99_RS00100 e244dc8033d1ea3e9448f029dba5c47e 332 PRINTS PR00721 Stomatin signature 171 192 2.0E-30 T 20-04-2016 IPR001972 Stomatin family GO:0016020 AMC99_RS00100 e244dc8033d1ea3e9448f029dba5c47e 332 PRINTS PR00721 Stomatin signature 152 170 2.0E-30 T 20-04-2016 IPR001972 Stomatin family GO:0016020 AMC99_RS00100 e244dc8033d1ea3e9448f029dba5c47e 332 PRINTS PR00721 Stomatin signature 108 125 2.0E-30 T 20-04-2016 IPR001972 Stomatin family GO:0016020 AMC99_RS00100 e244dc8033d1ea3e9448f029dba5c47e 332 PRINTS PR00721 Stomatin signature 73 94 2.0E-30 T 20-04-2016 IPR001972 Stomatin family GO:0016020 AMC99_RS00100 e244dc8033d1ea3e9448f029dba5c47e 332 PRINTS PR00721 Stomatin signature 128 151 2.0E-30 T 20-04-2016 IPR001972 Stomatin family GO:0016020 AMC99_RS00100 e244dc8033d1ea3e9448f029dba5c47e 332 PANTHER PTHR10264:SF27 1 327 5.8E-112 T 20-04-2016 AMC99_RS00100 e244dc8033d1ea3e9448f029dba5c47e 332 Pfam PF01145 SPFH domain / Band 7 family 22 192 4.6E-32 T 20-04-2016 IPR001107 Band 7 domain AMC99_RS00100 e244dc8033d1ea3e9448f029dba5c47e 332 SMART SM00244 18 176 2.8E-59 T 20-04-2016 IPR001107 Band 7 domain AMC99_RS00100 e244dc8033d1ea3e9448f029dba5c47e 332 PANTHER PTHR10264 1 327 5.8E-112 T 20-04-2016 IPR001972 Stomatin family GO:0016020 AMC99_RS09435 fce89ee6a3264beb68cef03be452ccaf 460 SUPERFAMILY SSF53720 4 457 1.44E-139 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMC99_RS09435 fce89ee6a3264beb68cef03be452ccaf 460 Pfam PF00171 Aldehyde dehydrogenase family 4 456 1.2E-138 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS09435 fce89ee6a3264beb68cef03be452ccaf 460 Gene3D G3DSA:3.40.605.10 3 244 1.8E-68 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS09435 fce89ee6a3264beb68cef03be452ccaf 460 PANTHER PTHR11699 3 457 4.6E-195 T 20-04-2016 AMC99_RS09435 fce89ee6a3264beb68cef03be452ccaf 460 PANTHER PTHR11699:SF28 3 457 4.6E-195 T 20-04-2016 AMC99_RS09435 fce89ee6a3264beb68cef03be452ccaf 460 Gene3D G3DSA:3.40.309.10 245 431 8.9E-61 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMC99_RS03700 5083a9242a770680bbcf397f806c2dc8 331 PANTHER PTHR30469 49 325 2.7E-23 T 20-04-2016 AMC99_RS03700 5083a9242a770680bbcf397f806c2dc8 331 SUPERFAMILY SSF111369 56 210 7.98E-17 T 20-04-2016 AMC99_RS03700 5083a9242a770680bbcf397f806c2dc8 331 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 236 1.6E-12 T 20-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMC99_RS03700 5083a9242a770680bbcf397f806c2dc8 331 Gene3D G3DSA:2.40.50.100 154 190 1.3E-8 T 20-04-2016 AMC99_RS03700 5083a9242a770680bbcf397f806c2dc8 331 Gene3D G3DSA:2.40.50.100 64 96 1.3E-8 T 20-04-2016 AMC99_RS03700 5083a9242a770680bbcf397f806c2dc8 331 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 326 9.7E-31 T 20-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMC99_RS05940 2ce69253097d71f0f20c82c864eade9c 124 PRINTS PR01651 Protein-export SecG membrane protein signature 37 53 5.1E-10 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMC99_RS05940 2ce69253097d71f0f20c82c864eade9c 124 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 5.1E-10 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMC99_RS05940 2ce69253097d71f0f20c82c864eade9c 124 PRINTS PR01651 Protein-export SecG membrane protein signature 2 22 5.1E-10 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMC99_RS05940 2ce69253097d71f0f20c82c864eade9c 124 Pfam PF03840 Preprotein translocase SecG subunit 6 71 4.9E-20 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMC99_RS05940 2ce69253097d71f0f20c82c864eade9c 124 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 5 72 1.7E-20 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMC99_RS05940 2ce69253097d71f0f20c82c864eade9c 124 PANTHER PTHR34182 4 122 2.6E-18 T 20-04-2016 AMC99_RS03435 ea96fc2a2ee2f26ff66061c6a4d1fd67 176 Pfam PF08534 Redoxin 38 164 7.9E-15 T 20-04-2016 IPR013740 Redoxin GO:0016491 AMC99_RS03435 ea96fc2a2ee2f26ff66061c6a4d1fd67 176 PANTHER PTHR10681:SF107 8 173 1.7E-29 T 20-04-2016 AMC99_RS03435 ea96fc2a2ee2f26ff66061c6a4d1fd67 176 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 8 163 8.7E-38 T 20-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AMC99_RS03435 ea96fc2a2ee2f26ff66061c6a4d1fd67 176 Gene3D G3DSA:3.40.30.10 12 171 1.8E-34 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS03435 ea96fc2a2ee2f26ff66061c6a4d1fd67 176 SUPERFAMILY SSF52833 59 171 1.36E-28 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS03435 ea96fc2a2ee2f26ff66061c6a4d1fd67 176 PANTHER PTHR10681 8 173 1.7E-29 T 20-04-2016 AMC99_RS13435 c00d3c56e630ecbe161619f768afbc88 276 Gene3D G3DSA:3.90.800.10 67 175 2.5E-19 T 20-04-2016 AMC99_RS13435 c00d3c56e630ecbe161619f768afbc88 276 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 201 7.8E-12 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS13435 c00d3c56e630ecbe161619f768afbc88 276 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 7.8E-12 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS13435 c00d3c56e630ecbe161619f768afbc88 276 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 7.8E-12 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS13435 c00d3c56e630ecbe161619f768afbc88 276 PRINTS PR00987 Glutamyl-tRNA synthetase signature 177 187 7.8E-12 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS13435 c00d3c56e630ecbe161619f768afbc88 276 SUPERFAMILY SSF52374 1 259 4.02E-76 T 20-04-2016 AMC99_RS13435 c00d3c56e630ecbe161619f768afbc88 276 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 258 7.1E-46 T 20-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS13435 c00d3c56e630ecbe161619f768afbc88 276 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 19 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS13435 c00d3c56e630ecbe161619f768afbc88 276 PANTHER PTHR11451 2 258 6.6E-47 T 20-04-2016 AMC99_RS13435 c00d3c56e630ecbe161619f768afbc88 276 Gene3D G3DSA:3.40.50.620 179 228 1.5E-37 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS13435 c00d3c56e630ecbe161619f768afbc88 276 Gene3D G3DSA:3.40.50.620 2 66 1.5E-37 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS13435 c00d3c56e630ecbe161619f768afbc88 276 PANTHER PTHR11451:SF35 2 258 6.6E-47 T 20-04-2016 AMC99_RS13605 1e49212c7f80bddea191bd93265b7762 425 Pfam PF07536 HWE histidine kinase 238 318 1.6E-15 T 20-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_RS13605 1e49212c7f80bddea191bd93265b7762 425 Pfam PF05227 CHASE3 domain 41 177 3.5E-27 T 20-04-2016 IPR007891 CHASE3 AMC99_RS13605 1e49212c7f80bddea191bd93265b7762 425 PANTHER PTHR41523 235 425 3.7E-28 T 20-04-2016 AMC99_RS13605 1e49212c7f80bddea191bd93265b7762 425 SUPERFAMILY SSF55874 319 418 7.19E-7 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS13605 1e49212c7f80bddea191bd93265b7762 425 PANTHER PTHR41523:SF5 235 425 3.7E-28 T 20-04-2016 AMC99_RS13605 1e49212c7f80bddea191bd93265b7762 425 SMART SM00911 238 320 5.4E-16 T 20-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_RS13605 1e49212c7f80bddea191bd93265b7762 425 Gene3D G3DSA:3.30.565.10 294 418 6.7E-4 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS04540 cfe349121c58853a9b0cf925d3a72879 292 Gene3D G3DSA:1.10.443.10 100 285 1.1E-46 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_RS04540 cfe349121c58853a9b0cf925d3a72879 292 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 286 26.774 T 20-04-2016 IPR023009 Tyrosine recombinase XerC/XerD AMC99_RS04540 cfe349121c58853a9b0cf925d3a72879 292 Pfam PF00589 Phage integrase family 102 272 3.5E-39 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_RS04540 cfe349121c58853a9b0cf925d3a72879 292 Gene3D G3DSA:1.10.150.130 3 90 1.5E-17 T 20-04-2016 IPR023109 Integrase/recombinase, N-terminal AMC99_RS04540 cfe349121c58853a9b0cf925d3a72879 292 PANTHER PTHR30349 1 287 3.3E-80 T 20-04-2016 AMC99_RS04540 cfe349121c58853a9b0cf925d3a72879 292 SUPERFAMILY SSF56349 3 278 1.03E-49 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMC99_RS04540 cfe349121c58853a9b0cf925d3a72879 292 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 81 1.8E-12 T 20-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMC99_RS04540 cfe349121c58853a9b0cf925d3a72879 292 PANTHER PTHR30349:SF5 1 287 3.3E-80 T 20-04-2016 AMC99_RS11250 3dbae411aecbbac8e625da64be07364d 512 Gene3D G3DSA:2.30.38.10 328 406 2.2E-20 T 20-04-2016 AMC99_RS11250 3dbae411aecbbac8e625da64be07364d 512 Pfam PF13193 AMP-binding enzyme C-terminal domain 422 495 3.6E-12 T 20-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMC99_RS11250 3dbae411aecbbac8e625da64be07364d 512 SUPERFAMILY SSF56801 11 508 1.14E-123 T 20-04-2016 AMC99_RS11250 3dbae411aecbbac8e625da64be07364d 512 Gene3D G3DSA:3.40.50.980 167 327 1.6E-32 T 20-04-2016 AMC99_RS11250 3dbae411aecbbac8e625da64be07364d 512 Gene3D G3DSA:3.40.50.980 13 166 5.6E-33 T 20-04-2016 AMC99_RS11250 3dbae411aecbbac8e625da64be07364d 512 Gene3D G3DSA:3.30.300.30 407 505 1.2E-20 T 20-04-2016 AMC99_RS11250 3dbae411aecbbac8e625da64be07364d 512 Pfam PF00501 AMP-binding enzyme 19 412 5.0E-80 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMC99_RS11250 3dbae411aecbbac8e625da64be07364d 512 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 20-04-2016 IPR020845 AMP-binding, conserved site AMC99_RS11250 3dbae411aecbbac8e625da64be07364d 512 PANTHER PTHR24096 6 503 2.0E-108 T 20-04-2016 AMC99_RS08865 ac6da943f2c9a09ae7085dda1c22c71e 207 PANTHER PTHR33169 50 206 4.1E-25 T 20-04-2016 AMC99_RS08865 ac6da943f2c9a09ae7085dda1c22c71e 207 Pfam PF03551 Transcriptional regulator PadR-like family 68 137 1.2E-18 T 20-04-2016 IPR005149 Transcription regulator PadR, N-terminal AMC99_RS08865 ac6da943f2c9a09ae7085dda1c22c71e 207 PANTHER PTHR33169:SF2 50 206 4.1E-25 T 20-04-2016 AMC99_RS08865 ac6da943f2c9a09ae7085dda1c22c71e 207 Gene3D G3DSA:1.10.10.10 55 158 4.8E-30 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS08865 ac6da943f2c9a09ae7085dda1c22c71e 207 SUPERFAMILY SSF46785 64 193 1.2E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS04230 81a4205ffc9dccec5d6f95cdf3c2b4cb 304 SUPERFAMILY SSF53328 2 173 5.23E-52 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_RS04230 81a4205ffc9dccec5d6f95cdf3c2b4cb 304 Pfam PF00551 Formyl transferase 4 166 3.8E-46 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_RS04230 81a4205ffc9dccec5d6f95cdf3c2b4cb 304 Gene3D G3DSA:3.40.50.170 2 174 1.0E-53 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_RS04230 81a4205ffc9dccec5d6f95cdf3c2b4cb 304 Pfam PF04237 YjbR 189 287 3.4E-13 T 20-04-2016 IPR007351 Uncharacterised protein YjbR AMC99_RS04230 81a4205ffc9dccec5d6f95cdf3c2b4cb 304 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 171 3.7E-47 T 20-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 AMC99_RS04230 81a4205ffc9dccec5d6f95cdf3c2b4cb 304 SUPERFAMILY SSF142906 182 296 9.29E-13 T 20-04-2016 AMC99_RS04230 81a4205ffc9dccec5d6f95cdf3c2b4cb 304 PANTHER PTHR10520 3 172 1.1E-62 T 20-04-2016 AMC99_RS06825 909e0e3a77eaa271ef6b58d6f0889b2e 301 Gene3D G3DSA:3.30.1490.20 104 173 4.7E-8 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS06825 909e0e3a77eaa271ef6b58d6f0889b2e 301 Gene3D G3DSA:3.30.470.20 174 276 2.2E-34 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMC99_RS06825 909e0e3a77eaa271ef6b58d6f0889b2e 301 PANTHER PTHR21621 1 292 6.6E-111 T 20-04-2016 AMC99_RS06825 909e0e3a77eaa271ef6b58d6f0889b2e 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 49.266 T 20-04-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AMC99_RS06825 909e0e3a77eaa271ef6b58d6f0889b2e 301 Gene3D G3DSA:3.40.50.20 5 103 3.2E-17 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS06825 909e0e3a77eaa271ef6b58d6f0889b2e 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 1.3E-63 T 20-04-2016 IPR013651 ATP-grasp fold, RimK-type AMC99_RS06825 909e0e3a77eaa271ef6b58d6f0889b2e 301 SUPERFAMILY SSF56059 98 287 4.65E-49 T 20-04-2016 AMC99_RS06825 909e0e3a77eaa271ef6b58d6f0889b2e 301 PANTHER PTHR21621:SF0 1 292 6.6E-111 T 20-04-2016 AMC99_RS06825 909e0e3a77eaa271ef6b58d6f0889b2e 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 5.0E-81 T 20-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 AMC99_RS07030 9d344fe27def10f35f746359f2d6ab52 210 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 205 5.7E-45 T 20-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 AMC99_RS07030 9d344fe27def10f35f746359f2d6ab52 210 PANTHER PTHR22854 3 207 1.9E-52 T 20-04-2016 AMC99_RS07030 9d344fe27def10f35f746359f2d6ab52 210 Gene3D G3DSA:3.20.20.70 3 207 4.6E-62 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS07030 9d344fe27def10f35f746359f2d6ab52 210 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 210 36.422 T 20-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 AMC99_RS07030 9d344fe27def10f35f746359f2d6ab52 210 PANTHER PTHR22854:SF6 3 207 1.9E-52 T 20-04-2016 AMC99_RS07030 9d344fe27def10f35f746359f2d6ab52 210 SUPERFAMILY SSF51366 4 207 2.35E-57 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMC99_RS03955 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 PIRSF PIRSF000114 1 330 3.1E-87 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMC99_RS03955 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 179 315 7.8E-46 T 20-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMC99_RS03955 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 Gene3D G3DSA:1.10.1040.10 189 330 4.2E-48 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMC99_RS03955 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 237 254 1.3E-37 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMC99_RS03955 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 1.3E-37 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMC99_RS03955 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 197 221 1.3E-37 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMC99_RS03955 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 131 151 1.3E-37 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMC99_RS03955 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 172 196 1.3E-37 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMC99_RS03955 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 SUPERFAMILY SSF51735 5 179 1.05E-41 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS03955 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 PANTHER PTHR11728 7 332 4.9E-103 T 20-04-2016 AMC99_RS03955 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 154 9.2E-41 T 20-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMC99_RS03955 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 Gene3D G3DSA:3.40.50.720 4 186 2.3E-50 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS03955 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 187 208 - T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMC99_RS03955 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 320 32.941 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMC99_RS03955 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 SUPERFAMILY SSF48179 178 329 1.56E-46 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMC99_RS02035 be6a9bc1727fbfb5deeedbbc9cc941ef 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 8 273 5.7E-123 T 20-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AMC99_RS02035 be6a9bc1727fbfb5deeedbbc9cc941ef 274 Gene3D G3DSA:2.160.10.10 91 256 5.4E-57 T 20-04-2016 AMC99_RS02035 be6a9bc1727fbfb5deeedbbc9cc941ef 274 PANTHER PTHR19136:SF52 15 273 4.9E-103 T 20-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AMC99_RS02035 be6a9bc1727fbfb5deeedbbc9cc941ef 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 177 212 1.6E-15 T 20-04-2016 IPR001451 Hexapeptide repeat AMC99_RS02035 be6a9bc1727fbfb5deeedbbc9cc941ef 274 Gene3D G3DSA:1.10.166.10 3 70 3.1E-27 T 20-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AMC99_RS02035 be6a9bc1727fbfb5deeedbbc9cc941ef 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 274 54.098 T 20-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AMC99_RS02035 be6a9bc1727fbfb5deeedbbc9cc941ef 274 SUPERFAMILY SSF51161 4 258 1.94E-67 T 20-04-2016 IPR011004 Trimeric LpxA-like AMC99_RS02035 be6a9bc1727fbfb5deeedbbc9cc941ef 274 PANTHER PTHR19136 15 273 4.9E-103 T 20-04-2016 AMC99_RS02035 be6a9bc1727fbfb5deeedbbc9cc941ef 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 5 69 1.3E-23 T 20-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AMC99_RS08680 884e2fd0811edea6aa6755514e1199be 303 PANTHER PTHR30448:SF0 2 300 8.9E-108 T 20-04-2016 AMC99_RS08680 884e2fd0811edea6aa6755514e1199be 303 Gene3D G3DSA:3.40.50.300 9 165 3.2E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08680 884e2fd0811edea6aa6755514e1199be 303 PANTHER PTHR30448 2 300 8.9E-108 T 20-04-2016 AMC99_RS08680 884e2fd0811edea6aa6755514e1199be 303 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 11 292 37.764 T 20-04-2016 IPR005337 RapZ-like family GO:0005524 AMC99_RS08680 884e2fd0811edea6aa6755514e1199be 303 PIRSF PIRSF005052 11 295 1.2E-92 T 20-04-2016 IPR005337 RapZ-like family GO:0005524 AMC99_RS08680 884e2fd0811edea6aa6755514e1199be 303 Pfam PF03668 P-loop ATPase protein family 13 292 4.8E-82 T 20-04-2016 IPR005337 RapZ-like family GO:0005524 AMC99_RS08680 884e2fd0811edea6aa6755514e1199be 303 SUPERFAMILY SSF52540 10 164 3.79E-14 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 Gene3D G3DSA:2.40.170.20 719 974 1.2E-36 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 Gene3D G3DSA:2.40.170.20 1037 1145 1.2E-36 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 Gene3D G3DSA:2.40.170.20 248 526 1.2E-36 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 Gene3D G3DSA:2.40.170.20 560 676 1.2E-36 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 Gene3D G3DSA:2.170.130.10 127 247 3.6E-4 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 SUPERFAMILY SSF49464 32 127 9.42E-15 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 PANTHER PTHR30069:SF6 22 378 1.1E-15 T 20-04-2016 AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 Gene3D G3DSA:2.60.40.1120 32 126 6.5E-16 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 Pfam PF13620 Carboxypeptidase regulatory-like domain 33 113 2.4E-18 T 20-04-2016 AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 PANTHER PTHR30069 22 378 1.1E-15 T 20-04-2016 AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 SUPERFAMILY SSF56935 859 976 7.33E-51 T 20-04-2016 AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 SUPERFAMILY SSF56935 362 526 7.33E-51 T 20-04-2016 AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 SUPERFAMILY SSF56935 559 701 7.33E-51 T 20-04-2016 AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 SUPERFAMILY SSF56935 738 794 7.33E-51 T 20-04-2016 AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 SUPERFAMILY SSF56935 1029 1080 7.33E-51 T 20-04-2016 AMC99_RS10810 a5976957b31ed6e495c19d8dfb90f705 1145 SUPERFAMILY SSF56935 124 326 7.33E-51 T 20-04-2016 AMC99_RS10135 d71305784e867254247fee75b13df942 541 Pfam PF00501 AMP-binding enzyme 25 425 3.5E-78 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMC99_RS10135 d71305784e867254247fee75b13df942 541 Gene3D G3DSA:3.30.300.30 420 518 8.8E-25 T 20-04-2016 AMC99_RS10135 d71305784e867254247fee75b13df942 541 PANTHER PTHR24096 10 520 8.3E-113 T 20-04-2016 AMC99_RS10135 d71305784e867254247fee75b13df942 541 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 509 6.1E-12 T 20-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMC99_RS10135 d71305784e867254247fee75b13df942 541 Gene3D G3DSA:3.40.50.980 190 341 8.5E-19 T 20-04-2016 AMC99_RS10135 d71305784e867254247fee75b13df942 541 SUPERFAMILY SSF56801 19 519 1.13E-120 T 20-04-2016 AMC99_RS10135 d71305784e867254247fee75b13df942 541 Gene3D G3DSA:2.30.38.10 342 418 1.6E-20 T 20-04-2016 AMC99_RS10135 d71305784e867254247fee75b13df942 541 Gene3D G3DSA:3.40.50.980 23 189 2.0E-35 T 20-04-2016 AMC99_RS10135 d71305784e867254247fee75b13df942 541 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 20-04-2016 IPR020845 AMP-binding, conserved site AMC99_RS07220 d92bfdcf7c8008764682b075db187c11 280 Pfam PF02567 Phenazine biosynthesis-like protein 6 271 3.3E-41 T 20-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- AMC99_RS07220 d92bfdcf7c8008764682b075db187c11 280 Gene3D G3DSA:3.10.310.10 124 267 1.1E-24 T 20-04-2016 AMC99_RS07220 d92bfdcf7c8008764682b075db187c11 280 PIRSF PIRSF016184 1 277 6.6E-56 T 20-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- AMC99_RS07220 d92bfdcf7c8008764682b075db187c11 280 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 272 8.4E-42 T 20-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- AMC99_RS07220 d92bfdcf7c8008764682b075db187c11 280 Gene3D G3DSA:3.10.310.10 3 123 3.8E-35 T 20-04-2016 AMC99_RS07220 d92bfdcf7c8008764682b075db187c11 280 SUPERFAMILY SSF54506 3 273 1.45E-56 T 20-04-2016 AMC99_RS07220 d92bfdcf7c8008764682b075db187c11 280 PANTHER PTHR13774 6 271 2.6E-68 T 20-04-2016 AMC99_RS07220 d92bfdcf7c8008764682b075db187c11 280 PANTHER PTHR13774:SF18 6 271 2.6E-68 T 20-04-2016 AMC99_RS12915 6f5bec3eae69801a9dc5cb3e526f9853 313 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 307 5.2E-75 T 20-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 AMC99_RS12915 6f5bec3eae69801a9dc5cb3e526f9853 313 PANTHER PTHR22749:SF0 1 307 4.2E-107 T 20-04-2016 AMC99_RS12915 6f5bec3eae69801a9dc5cb3e526f9853 313 SUPERFAMILY SSF52374 17 197 1.1E-32 T 20-04-2016 AMC99_RS12915 6f5bec3eae69801a9dc5cb3e526f9853 313 PANTHER PTHR22749 1 307 4.2E-107 T 20-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 AMC99_RS12915 6f5bec3eae69801a9dc5cb3e526f9853 313 Pfam PF01687 Riboflavin kinase 184 307 3.3E-36 T 20-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 AMC99_RS12915 6f5bec3eae69801a9dc5cb3e526f9853 313 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 80 1.5E-7 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMC99_RS12915 6f5bec3eae69801a9dc5cb3e526f9853 313 PIRSF PIRSF004491 1 313 3.1E-95 T 20-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 AMC99_RS12915 6f5bec3eae69801a9dc5cb3e526f9853 313 Pfam PF06574 FAD synthetase 12 167 4.5E-45 T 20-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 AMC99_RS12915 6f5bec3eae69801a9dc5cb3e526f9853 313 SMART SM00904 183 308 2.4E-61 T 20-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 AMC99_RS12915 6f5bec3eae69801a9dc5cb3e526f9853 313 SUPERFAMILY SSF82114 174 308 2.4E-43 T 20-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 AMC99_RS12915 6f5bec3eae69801a9dc5cb3e526f9853 313 Gene3D G3DSA:3.40.50.620 5 179 7.9E-57 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS12915 6f5bec3eae69801a9dc5cb3e526f9853 313 Gene3D G3DSA:2.40.30.30 180 311 2.8E-41 T 20-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 AMC99_RS10940 c27aaeb6d4c141838b8e2efd9af250c6 732 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 105 614 3.2E-164 T 20-04-2016 AMC99_RS10940 c27aaeb6d4c141838b8e2efd9af250c6 732 SUPERFAMILY SSF53955 83 280 3.09E-67 T 20-04-2016 IPR023346 Lysozyme-like domain AMC99_RS10940 c27aaeb6d4c141838b8e2efd9af250c6 732 PANTHER PTHR32282:SF5 20 730 4.7E-182 T 20-04-2016 AMC99_RS10940 c27aaeb6d4c141838b8e2efd9af250c6 732 Pfam PF00912 Transglycosylase 101 267 2.1E-56 T 20-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMC99_RS10940 c27aaeb6d4c141838b8e2efd9af250c6 732 SUPERFAMILY SSF56601 249 632 6.0E-105 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS10940 c27aaeb6d4c141838b8e2efd9af250c6 732 Gene3D G3DSA:3.40.710.10 269 635 2.2E-107 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS10940 c27aaeb6d4c141838b8e2efd9af250c6 732 PANTHER PTHR32282 20 730 4.7E-182 T 20-04-2016 AMC99_RS10940 c27aaeb6d4c141838b8e2efd9af250c6 732 Pfam PF00905 Penicillin binding protein transpeptidase domain 352 575 3.9E-29 T 20-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMC99_RS10940 c27aaeb6d4c141838b8e2efd9af250c6 732 Gene3D G3DSA:1.10.3810.10 94 268 3.1E-66 T 20-04-2016 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 PRINTS PR00315 GTP-binding elongation factor signature 98 108 1.15E-15 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.15E-15 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.15E-15 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 PRINTS PR00315 GTP-binding elongation factor signature 114 125 1.15E-15 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 PRINTS PR00315 GTP-binding elongation factor signature 150 159 1.15E-15 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 SUPERFAMILY SSF54980 420 498 3.96E-24 T 20-04-2016 IPR009022 Elongation factor G, III-V domain AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 SUPERFAMILY SSF52540 5 301 1.96E-106 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 SUPERFAMILY SSF54980 621 707 3.36E-30 T 20-04-2016 IPR009022 Elongation factor G, III-V domain AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 Gene3D G3DSA:2.40.30.10 326 422 1.3E-36 T 20-04-2016 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 Gene3D G3DSA:3.30.230.10 502 617 2.4E-45 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 Pfam PF00679 Elongation factor G C-terminus 619 704 1.4E-31 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 Gene3D G3DSA:3.30.70.870 423 498 4.8E-38 T 20-04-2016 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 SMART SM00838 618 705 4.2E-55 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 PANTHER PTHR23115 274 302 0.0 T 20-04-2016 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 PANTHER PTHR23115 95 197 0.0 T 20-04-2016 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 PANTHER PTHR23115 1 74 0.0 T 20-04-2016 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 PANTHER PTHR23115 322 709 0.0 T 20-04-2016 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 Hamap MF_00054_B Elongation factor G [fusA]. 6 709 109.801 T 20-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 PANTHER PTHR23115:SF66 274 302 0.0 T 20-04-2016 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 PANTHER PTHR23115:SF66 95 197 0.0 T 20-04-2016 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 PANTHER PTHR23115:SF66 1 74 0.0 T 20-04-2016 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 PANTHER PTHR23115:SF66 322 709 0.0 T 20-04-2016 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 Gene3D G3DSA:3.30.70.240 618 703 5.5E-33 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 708 0.0 T 20-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 Gene3D G3DSA:3.40.50.300 6 306 7.2E-103 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 Pfam PF00009 Elongation factor Tu GTP binding domain 9 301 8.1E-67 T 20-04-2016 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 SMART SM00889 498 616 1.1E-62 T 20-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 Pfam PF14492 Elongation Factor G, domain II 422 495 8.9E-34 T 20-04-2016 IPR009022 Elongation factor G, III-V domain AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 Pfam PF03764 Elongation factor G, domain IV 497 615 5.8E-43 T 20-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 SUPERFAMILY SSF50447 284 422 3.03E-34 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 Pfam PF03144 Elongation factor Tu domain 2 343 409 1.2E-12 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 200 6.1E-34 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_RS07560 06f8d006cb186fedb42c7f22cf6bdb6b 710 SUPERFAMILY SSF54211 497 616 2.78E-40 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS00295 c929d12baa5d3d5f28cb0a1c97530f60 410 Pfam PF00145 C-5 cytosine-specific DNA methylase 64 388 6.8E-82 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS00295 c929d12baa5d3d5f28cb0a1c97530f60 410 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 65 81 8.3E-15 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_RS00295 c929d12baa5d3d5f28cb0a1c97530f60 410 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 221 234 8.3E-15 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_RS00295 c929d12baa5d3d5f28cb0a1c97530f60 410 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 175 189 8.3E-15 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_RS00295 c929d12baa5d3d5f28cb0a1c97530f60 410 PANTHER PTHR10629:SF31 64 408 2.9E-65 T 20-04-2016 AMC99_RS00295 c929d12baa5d3d5f28cb0a1c97530f60 410 PANTHER PTHR10629 64 408 2.9E-65 T 20-04-2016 AMC99_RS00295 c929d12baa5d3d5f28cb0a1c97530f60 410 SUPERFAMILY SSF53335 64 392 8.64E-85 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS00295 c929d12baa5d3d5f28cb0a1c97530f60 410 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 66 388 8.0E-95 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_RS00295 c929d12baa5d3d5f28cb0a1c97530f60 410 Gene3D G3DSA:1.10.260.40 6 46 2.3E-8 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS00295 c929d12baa5d3d5f28cb0a1c97530f60 410 Gene3D G3DSA:3.40.50.150 58 253 2.9E-59 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS00295 c929d12baa5d3d5f28cb0a1c97530f60 410 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 372 390 - T 20-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 AMC99_RS00295 c929d12baa5d3d5f28cb0a1c97530f60 410 Pfam PF13560 Helix-turn-helix domain 5 48 1.1E-7 T 20-04-2016 AMC99_RS00295 c929d12baa5d3d5f28cb0a1c97530f60 410 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 127 139 - T 20-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 AMC99_RS00295 c929d12baa5d3d5f28cb0a1c97530f60 410 Gene3D G3DSA:3.90.120.10 254 378 1.8E-32 T 20-04-2016 AMC99_RS00295 c929d12baa5d3d5f28cb0a1c97530f60 410 SUPERFAMILY SSF47413 5 48 9.38E-8 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS08995 421f08a9e92bd59a4fce0aa2ae528e3c 355 PANTHER PTHR30347:SF3 56 355 1.9E-68 T 20-04-2016 AMC99_RS08995 421f08a9e92bd59a4fce0aa2ae528e3c 355 SUPERFAMILY SSF50182 161 231 1.28E-10 T 20-04-2016 IPR010920 LSM domain AMC99_RS08995 421f08a9e92bd59a4fce0aa2ae528e3c 355 Pfam PF00924 Mechanosensitive ion channel 118 323 1.8E-47 T 20-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMC99_RS08995 421f08a9e92bd59a4fce0aa2ae528e3c 355 SUPERFAMILY SSF82861 79 159 1.2E-11 T 20-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMC99_RS08995 421f08a9e92bd59a4fce0aa2ae528e3c 355 Gene3D G3DSA:3.30.70.100 235 320 5.9E-23 T 20-04-2016 AMC99_RS08995 421f08a9e92bd59a4fce0aa2ae528e3c 355 Gene3D G3DSA:2.30.30.60 177 230 2.2E-9 T 20-04-2016 AMC99_RS08995 421f08a9e92bd59a4fce0aa2ae528e3c 355 PANTHER PTHR30347 56 355 1.9E-68 T 20-04-2016 AMC99_RS08995 421f08a9e92bd59a4fce0aa2ae528e3c 355 SUPERFAMILY SSF82689 234 334 1.03E-29 T 20-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMC99_RS02155 a12029a998e8f2d82b95ff483746da1c 170 Pfam PF00691 OmpA family 67 162 1.4E-21 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS02155 a12029a998e8f2d82b95ff483746da1c 170 SUPERFAMILY SSF103088 53 165 1.7E-34 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS02155 a12029a998e8f2d82b95ff483746da1c 170 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 66 167 6.6E-43 T 20-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 AMC99_RS02155 a12029a998e8f2d82b95ff483746da1c 170 ProSitePatterns PS01068 OmpA-like domain. 100 144 - T 20-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AMC99_RS02155 a12029a998e8f2d82b95ff483746da1c 170 Gene3D G3DSA:3.30.1330.60 59 168 7.8E-35 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS02155 a12029a998e8f2d82b95ff483746da1c 170 PANTHER PTHR30128 57 170 1.3E-48 T 20-04-2016 AMC99_RS02155 a12029a998e8f2d82b95ff483746da1c 170 PRINTS PR01021 OMPA domain signature 68 90 1.1E-14 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_RS02155 a12029a998e8f2d82b95ff483746da1c 170 PRINTS PR01021 OMPA domain signature 98 113 1.1E-14 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_RS02155 a12029a998e8f2d82b95ff483746da1c 170 PRINTS PR01021 OMPA domain signature 113 129 1.1E-14 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_RS02155 a12029a998e8f2d82b95ff483746da1c 170 PANTHER PTHR30128:SF18 57 170 1.3E-48 T 20-04-2016 AMC99_RS01975 3ae6f62bb3c74e4811a0849939d1b8e2 102 PANTHER PTHR30305 16 101 2.2E-27 T 20-04-2016 AMC99_RS01975 3ae6f62bb3c74e4811a0849939d1b8e2 102 Pfam PF03831 PhnA domain 35 101 2.1E-29 T 20-04-2016 IPR013988 PhnA protein, C-terminal AMC99_RS01975 3ae6f62bb3c74e4811a0849939d1b8e2 102 SUPERFAMILY SSF82057 32 101 4.39E-25 T 20-04-2016 AMC99_RS01975 3ae6f62bb3c74e4811a0849939d1b8e2 102 Gene3D G3DSA:2.30.30.40 34 101 1.3E-31 T 20-04-2016 AMC99_RS01975 3ae6f62bb3c74e4811a0849939d1b8e2 102 PANTHER PTHR30305:SF3 16 101 2.2E-27 T 20-04-2016 AMC99_RS08735 29f72b008e02cc07c2f405680c582310 258 SUPERFAMILY SSF55120 6 256 3.45E-79 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS08735 29f72b008e02cc07c2f405680c582310 258 Pfam PF01416 tRNA pseudouridine synthase 149 255 1.3E-30 T 20-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS08735 29f72b008e02cc07c2f405680c582310 258 Pfam PF01416 tRNA pseudouridine synthase 13 109 7.3E-8 T 20-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS08735 29f72b008e02cc07c2f405680c582310 258 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 7 254 31.265 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS08735 29f72b008e02cc07c2f405680c582310 258 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 9 248 2.5E-49 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS08735 29f72b008e02cc07c2f405680c582310 258 PANTHER PTHR11142 3 257 2.1E-82 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS08735 29f72b008e02cc07c2f405680c582310 258 PIRSF PIRSF001430 6 258 1.9E-66 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS08735 29f72b008e02cc07c2f405680c582310 258 Gene3D G3DSA:3.30.70.580 6 111 8.1E-31 T 20-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS08735 29f72b008e02cc07c2f405680c582310 258 Gene3D G3DSA:3.30.70.660 113 251 8.9E-46 T 20-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS03405 c74e1686f9125b0bbf8fb5ef1265d6b6 211 SMART SM00702 26 205 4.0E-27 T 20-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AMC99_RS03405 c74e1686f9125b0bbf8fb5ef1265d6b6 211 PANTHER PTHR10869 28 211 1.4E-45 T 20-04-2016 AMC99_RS03405 c74e1686f9125b0bbf8fb5ef1265d6b6 211 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 102 205 1.7E-15 T 20-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMC99_RS06655 ca497519855ebee422e3ca8eea483a65 57 Pfam PF04964 Flp/Fap pilin component 7 50 3.5E-15 T 20-04-2016 IPR007047 Flp/Fap pilin component AMC99_RS03245 276fe78f634a842acecd22f986e7bd00 338 SUPERFAMILY SSF51430 1 336 4.19E-95 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMC99_RS03245 276fe78f634a842acecd22f986e7bd00 338 Gene3D G3DSA:3.20.20.100 1 335 3.9E-93 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMC99_RS03245 276fe78f634a842acecd22f986e7bd00 338 Pfam PF00248 Aldo/keto reductase family 16 329 3.4E-73 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMC99_RS03245 276fe78f634a842acecd22f986e7bd00 338 PRINTS PR00069 Aldo-keto reductase signature 148 165 9.9E-7 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_RS03245 276fe78f634a842acecd22f986e7bd00 338 PRINTS PR00069 Aldo-keto reductase signature 117 135 9.9E-7 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_RS03245 276fe78f634a842acecd22f986e7bd00 338 PANTHER PTHR11732 256 336 1.6E-116 T 20-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMC99_RS03245 276fe78f634a842acecd22f986e7bd00 338 PANTHER PTHR11732 1 237 1.6E-116 T 20-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMC99_RS03245 276fe78f634a842acecd22f986e7bd00 338 PANTHER PTHR11732:SF255 256 336 1.6E-116 T 20-04-2016 AMC99_RS03245 276fe78f634a842acecd22f986e7bd00 338 PANTHER PTHR11732:SF255 1 237 1.6E-116 T 20-04-2016 AMC99_RS09735 0f07fc3ee92e4c748d9d8d5dc9f48449 313 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 33 305 3.4E-71 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMC99_RS09735 0f07fc3ee92e4c748d9d8d5dc9f48449 313 PANTHER PTHR11562 1 312 1.5E-87 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMC99_RS09735 0f07fc3ee92e4c748d9d8d5dc9f48449 313 Gene3D G3DSA:1.20.1510.10 33 223 1.2E-50 T 20-04-2016 IPR027469 Cation efflux protein transmembrane domain AMC99_RS09735 0f07fc3ee92e4c748d9d8d5dc9f48449 313 SUPERFAMILY SSF160240 235 303 1.15E-7 T 20-04-2016 AMC99_RS09735 0f07fc3ee92e4c748d9d8d5dc9f48449 313 SUPERFAMILY SSF161111 33 223 2.22E-49 T 20-04-2016 AMC99_RS09735 0f07fc3ee92e4c748d9d8d5dc9f48449 313 PANTHER PTHR11562:SF17 1 312 1.5E-87 T 20-04-2016 AMC99_RS09735 0f07fc3ee92e4c748d9d8d5dc9f48449 313 Pfam PF01545 Cation efflux family 37 223 1.1E-37 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMC99_RS04790 6bc7821ca7361fd98d558951020a4d44 294 PANTHER PTHR11627:SF20 4 178 6.1E-25 T 20-04-2016 AMC99_RS04790 6bc7821ca7361fd98d558951020a4d44 294 PANTHER PTHR11627 4 178 6.1E-25 T 20-04-2016 AMC99_RS04790 6bc7821ca7361fd98d558951020a4d44 294 Gene3D G3DSA:3.20.20.70 5 294 1.9E-90 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS04790 6bc7821ca7361fd98d558951020a4d44 294 SUPERFAMILY SSF51569 3 294 3.04E-89 T 20-04-2016 AMC99_RS04790 6bc7821ca7361fd98d558951020a4d44 294 Pfam PF00274 Fructose-bisphosphate aldolase class-I 10 179 1.8E-11 T 20-04-2016 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS11705 fa7741514bf67372ef2d4da4fe92e9e5 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 416 494 1.2E-15 T 20-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMC99_RS11705 fa7741514bf67372ef2d4da4fe92e9e5 513 Gene3D G3DSA:2.30.38.10 335 401 4.7E-12 T 20-04-2016 AMC99_RS11705 fa7741514bf67372ef2d4da4fe92e9e5 513 PANTHER PTHR24096:SF106 1 504 1.2E-203 T 20-04-2016 AMC99_RS11705 fa7741514bf67372ef2d4da4fe92e9e5 513 PANTHER PTHR24096 1 504 1.2E-203 T 20-04-2016 AMC99_RS11705 fa7741514bf67372ef2d4da4fe92e9e5 513 Gene3D G3DSA:3.40.50.980 5 160 4.3E-36 T 20-04-2016 AMC99_RS11705 fa7741514bf67372ef2d4da4fe92e9e5 513 Pfam PF00501 AMP-binding enzyme 5 407 1.1E-68 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMC99_RS11705 fa7741514bf67372ef2d4da4fe92e9e5 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 154 165 - T 20-04-2016 IPR020845 AMP-binding, conserved site AMC99_RS11705 fa7741514bf67372ef2d4da4fe92e9e5 513 Gene3D G3DSA:3.30.300.30 403 504 1.0E-26 T 20-04-2016 AMC99_RS11705 fa7741514bf67372ef2d4da4fe92e9e5 513 Gene3D G3DSA:3.40.50.980 161 327 1.2E-34 T 20-04-2016 AMC99_RS11705 fa7741514bf67372ef2d4da4fe92e9e5 513 SUPERFAMILY SSF56801 5 507 7.46E-124 T 20-04-2016 AMC99_RS08345 3addce570d5a20d94f761a76bd9ef612 110 SUPERFAMILY SSF52833 1 103 6.56E-36 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS08345 3addce570d5a20d94f761a76bd9ef612 110 Pfam PF00462 Glutaredoxin 17 80 2.7E-21 T 20-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMC99_RS08345 3addce570d5a20d94f761a76bd9ef612 110 PIRSF PIRSF005894 1 108 3.4E-49 T 20-04-2016 IPR014434 Monothiol glutaredoxin AMC99_RS08345 3addce570d5a20d94f761a76bd9ef612 110 Gene3D G3DSA:3.40.30.10 8 102 9.3E-34 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS08345 3addce570d5a20d94f761a76bd9ef612 110 PANTHER PTHR10293 2 109 6.9E-61 T 20-04-2016 IPR004480 Monothiol glutaredoxin-related AMC99_RS08345 3addce570d5a20d94f761a76bd9ef612 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 4.5E-46 T 20-04-2016 IPR004480 Monothiol glutaredoxin-related AMC99_RS12750 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 Gene3D G3DSA:3.40.50.720 2 220 5.9E-56 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12750 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 408 5.7E-116 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AMC99_RS12750 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 SUPERFAMILY SSF51735 5 189 6.99E-46 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12750 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 PANTHER PTHR11374 1 418 6.5E-246 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AMC99_RS12750 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 178 1.4E-32 T 20-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 AMC99_RS12750 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 PIRSF PIRSF500136 1 421 2.2E-147 T 20-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AMC99_RS12750 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 SUPERFAMILY SSF48179 199 290 1.67E-24 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMC99_RS12750 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 SMART SM00984 315 415 7.0E-31 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AMC99_RS12750 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 315 413 6.2E-19 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AMC99_RS12750 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 PANTHER PTHR11374:SF25 1 418 6.5E-246 T 20-04-2016 AMC99_RS12750 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 SUPERFAMILY SSF52413 298 414 5.1E-26 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AMC99_RS12750 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 PIRSF PIRSF000124 4 420 1.8E-50 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AMC99_RS12750 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 200 288 2.1E-22 T 20-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 AMC99_RS12750 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 Gene3D G3DSA:3.40.50.720 230 416 3.6E-39 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06850 5c2c38d8232ab91b900688fdb317c59a 149 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 118 5.7E-19 T 20-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMC99_RS06850 5c2c38d8232ab91b900688fdb317c59a 149 SUPERFAMILY SSF51316 1 138 6.28E-36 T 20-04-2016 IPR011057 Mss4-like AMC99_RS06850 5c2c38d8232ab91b900688fdb317c59a 149 PANTHER PTHR33337 5 142 9.8E-22 T 20-04-2016 AMC99_RS06850 5c2c38d8232ab91b900688fdb317c59a 149 PANTHER PTHR33337:SF10 5 142 9.8E-22 T 20-04-2016 AMC99_RS06850 5c2c38d8232ab91b900688fdb317c59a 149 Gene3D G3DSA:3.90.1590.10 3 142 1.3E-33 T 20-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMC99_RS09030 f67aed58f7742c9420bbf083b95de120 308 Pfam PF13460 NAD(P)H-binding 11 160 1.2E-22 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09030 f67aed58f7742c9420bbf083b95de120 308 SUPERFAMILY SSF51735 7 307 1.37E-53 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09030 f67aed58f7742c9420bbf083b95de120 308 Gene3D G3DSA:3.90.25.10 269 306 8.3E-6 T 20-04-2016 AMC99_RS09030 f67aed58f7742c9420bbf083b95de120 308 Gene3D G3DSA:3.40.50.720 7 231 1.4E-46 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09030 f67aed58f7742c9420bbf083b95de120 308 PANTHER PTHR10366 6 240 2.2E-41 T 20-04-2016 AMC99_RS09030 f67aed58f7742c9420bbf083b95de120 308 PANTHER PTHR10366 260 305 2.2E-41 T 20-04-2016 AMC99_RS09030 f67aed58f7742c9420bbf083b95de120 308 PANTHER PTHR10366:SF466 260 305 2.2E-41 T 20-04-2016 AMC99_RS09030 f67aed58f7742c9420bbf083b95de120 308 PANTHER PTHR10366:SF466 6 240 2.2E-41 T 20-04-2016 AMC99_RS00130 b9a75219d3852ac86df91751be55196c 105 PANTHER PTHR12302 6 103 9.2E-12 T 20-04-2016 AMC99_RS00130 b9a75219d3852ac86df91751be55196c 105 PANTHER PTHR12302:SF0 6 103 9.2E-12 T 20-04-2016 AMC99_RS00130 b9a75219d3852ac86df91751be55196c 105 Gene3D G3DSA:2.40.50.90 4 95 1.2E-19 T 20-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMC99_RS00130 b9a75219d3852ac86df91751be55196c 105 Pfam PF00565 Staphylococcal nuclease homologue 18 97 1.1E-8 T 20-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMC99_RS00130 b9a75219d3852ac86df91751be55196c 105 SUPERFAMILY SSF50199 4 101 1.15E-20 T 20-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMC99_RS07925 48bf95ff87a421f7358eac77205ea354 230 PANTHER PTHR13887 1 229 1.8E-54 T 20-04-2016 AMC99_RS07925 48bf95ff87a421f7358eac77205ea354 230 Pfam PF01323 DSBA-like thioredoxin domain 8 221 2.3E-41 T 20-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 AMC99_RS07925 48bf95ff87a421f7358eac77205ea354 230 PANTHER PTHR13887:SF10 1 229 1.8E-54 T 20-04-2016 AMC99_RS07925 48bf95ff87a421f7358eac77205ea354 230 SUPERFAMILY SSF52833 5 227 2.33E-49 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS07925 48bf95ff87a421f7358eac77205ea354 230 Gene3D G3DSA:3.40.30.10 5 223 1.2E-48 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS03845 72513592a3a359f00e4ca36630877518 248 Gene3D G3DSA:3.30.70.20 90 141 8.1E-26 T 20-04-2016 AMC99_RS03845 72513592a3a359f00e4ca36630877518 248 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 115 126 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_RS03845 72513592a3a359f00e4ca36630877518 248 PANTHER PTHR11938 11 36 3.5E-48 T 20-04-2016 AMC99_RS03845 72513592a3a359f00e4ca36630877518 248 PANTHER PTHR11938 57 197 3.5E-48 T 20-04-2016 AMC99_RS03845 72513592a3a359f00e4ca36630877518 248 Pfam PF13247 4Fe-4S dicluster domain 76 176 5.0E-26 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_RS03845 72513592a3a359f00e4ca36630877518 248 SUPERFAMILY SSF54862 11 213 3.77E-63 T 20-04-2016 AMC99_RS03845 72513592a3a359f00e4ca36630877518 248 PANTHER PTHR11938:SF107 11 36 3.5E-48 T 20-04-2016 AMC99_RS03845 72513592a3a359f00e4ca36630877518 248 PANTHER PTHR11938:SF107 57 197 3.5E-48 T 20-04-2016 AMC99_RS03845 72513592a3a359f00e4ca36630877518 248 Gene3D G3DSA:3.30.70.20 11 89 1.0E-32 T 20-04-2016 AMC99_RS03845 72513592a3a359f00e4ca36630877518 248 Gene3D G3DSA:3.30.70.20 142 213 1.0E-32 T 20-04-2016 AMC99_RS09925 eb1757ea655ab891371a535850552992 480 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 479 2.5E-167 T 20-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMC99_RS09925 eb1757ea655ab891371a535850552992 480 Gene3D G3DSA:3.40.50.720 8 180 6.2E-51 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09925 eb1757ea655ab891371a535850552992 480 PANTHER PTHR23429 11 480 8.7E-200 T 20-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMC99_RS09925 eb1757ea655ab891371a535850552992 480 SUPERFAMILY SSF51735 7 184 2.36E-47 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09925 eb1757ea655ab891371a535850552992 480 PIRSF PIRSF000110 2 480 9.0E-165 T 20-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMC99_RS09925 eb1757ea655ab891371a535850552992 480 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 181 4.1E-47 T 20-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMC99_RS09925 eb1757ea655ab891371a535850552992 480 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 5 479 81.695 T 20-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMC99_RS09925 eb1757ea655ab891371a535850552992 480 PANTHER PTHR23429:SF0 11 480 8.7E-200 T 20-04-2016 AMC99_RS09925 eb1757ea655ab891371a535850552992 480 Gene3D G3DSA:3.30.360.10 181 478 3.6E-122 T 20-04-2016 AMC99_RS09925 eb1757ea655ab891371a535850552992 480 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 171 177 - T 20-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMC99_RS09925 eb1757ea655ab891371a535850552992 480 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 161 189 6.5E-47 T 20-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMC99_RS09925 eb1757ea655ab891371a535850552992 480 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 137 150 6.5E-47 T 20-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMC99_RS09925 eb1757ea655ab891371a535850552992 480 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 316 342 6.5E-47 T 20-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMC99_RS09925 eb1757ea655ab891371a535850552992 480 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 213 230 6.5E-47 T 20-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMC99_RS09925 eb1757ea655ab891371a535850552992 480 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 231 247 6.5E-47 T 20-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMC99_RS09925 eb1757ea655ab891371a535850552992 480 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 183 478 4.5E-114 T 20-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMC99_RS09925 eb1757ea655ab891371a535850552992 480 SUPERFAMILY SSF55347 171 478 6.87E-115 T 20-04-2016 AMC99_RS11335 7430e9819baf94568b58868cc098a2f2 301 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 20 289 17.288 T 20-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AMC99_RS11335 7430e9819baf94568b58868cc098a2f2 301 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 23 288 7.0E-59 T 20-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AMC99_RS11335 7430e9819baf94568b58868cc098a2f2 301 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 23 284 6.4E-70 T 20-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AMC99_RS11335 7430e9819baf94568b58868cc098a2f2 301 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 164 176 - T 20-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AMC99_RS11335 7430e9819baf94568b58868cc098a2f2 301 PANTHER PTHR30589 12 285 3.4E-68 T 20-04-2016 AMC99_RS11335 7430e9819baf94568b58868cc098a2f2 301 PANTHER PTHR30589:SF0 12 285 3.4E-68 T 20-04-2016 AMC99_RS05385 2a20118e67383bd52cd64dfc07a7429a 310 Pfam PF01963 TraB family 49 307 9.1E-73 T 20-04-2016 IPR002816 Pheromone shutdown, TraB AMC99_RS05385 2a20118e67383bd52cd64dfc07a7429a 310 PANTHER PTHR40590 23 309 4.7E-32 T 20-04-2016 AMC99_RS06835 2698589b758dbf48ee1d22a086e7995e 619 SUPERFAMILY SSF55486 46 619 3.18E-200 T 20-04-2016 AMC99_RS06835 2698589b758dbf48ee1d22a086e7995e 619 PANTHER PTHR10514 46 613 5.1E-230 T 20-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_RS06835 2698589b758dbf48ee1d22a086e7995e 619 Pfam PF01401 Angiotensin-converting enzyme 44 619 6.3E-198 T 20-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_RS06835 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 238 265 1.4E-75 T 20-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_RS06835 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 383 399 1.4E-75 T 20-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_RS06835 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 273 294 1.4E-75 T 20-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_RS06835 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 351 376 1.4E-75 T 20-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_RS06835 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 487 514 1.4E-75 T 20-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_RS06835 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 515 543 1.4E-75 T 20-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_RS06835 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 452 477 1.4E-75 T 20-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_RS06835 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 411 431 1.4E-75 T 20-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_RS06405 066e4e287330ab90311bd040614d4c33 590 Gene3D G3DSA:1.10.530.10 417 558 6.5E-34 T 20-04-2016 AMC99_RS06405 066e4e287330ab90311bd040614d4c33 590 SUPERFAMILY SSF53955 416 562 4.5E-36 T 20-04-2016 IPR023346 Lysozyme-like domain AMC99_RS06405 066e4e287330ab90311bd040614d4c33 590 Pfam PF01464 Transglycosylase SLT domain 417 523 1.2E-19 T 20-04-2016 IPR008258 Transglycosylase SLT domain 1 AMC99_RS06405 066e4e287330ab90311bd040614d4c33 590 PANTHER PTHR21666 389 576 1.1E-28 T 20-04-2016 AMC99_RS06405 066e4e287330ab90311bd040614d4c33 590 SUPERFAMILY SSF48435 51 393 4.45E-19 T 20-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AMC99_RS09215 52117d8470baa5a6815917ae24fc9e7b 276 Gene3D G3DSA:3.90.230.10 20 270 8.8E-91 T 20-04-2016 IPR000994 Peptidase M24, structural domain AMC99_RS09215 52117d8470baa5a6815917ae24fc9e7b 276 SUPERFAMILY SSF55920 23 270 2.22E-84 T 20-04-2016 IPR000994 Peptidase M24, structural domain AMC99_RS09215 52117d8470baa5a6815917ae24fc9e7b 276 Pfam PF00557 Metallopeptidase family M24 28 257 5.3E-52 T 20-04-2016 IPR000994 Peptidase M24, structural domain AMC99_RS09215 52117d8470baa5a6815917ae24fc9e7b 276 Hamap MF_01974 Methionine aminopeptidase [map]. 19 266 39.457 T 20-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMC99_RS09215 52117d8470baa5a6815917ae24fc9e7b 276 PANTHER PTHR10804:SF82 19 276 1.2E-130 T 20-04-2016 AMC99_RS09215 52117d8470baa5a6815917ae24fc9e7b 276 PANTHER PTHR10804 19 276 1.2E-130 T 20-04-2016 AMC99_RS09215 52117d8470baa5a6815917ae24fc9e7b 276 PRINTS PR00599 Methionine aminopeptidase-1 signature 177 189 9.8E-22 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMC99_RS09215 52117d8470baa5a6815917ae24fc9e7b 276 PRINTS PR00599 Methionine aminopeptidase-1 signature 208 220 9.8E-22 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMC99_RS09215 52117d8470baa5a6815917ae24fc9e7b 276 PRINTS PR00599 Methionine aminopeptidase-1 signature 106 122 9.8E-22 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMC99_RS09215 52117d8470baa5a6815917ae24fc9e7b 276 PRINTS PR00599 Methionine aminopeptidase-1 signature 84 97 9.8E-22 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMC99_RS09215 52117d8470baa5a6815917ae24fc9e7b 276 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 20 265 2.9E-88 T 20-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMC99_RS10370 ddb6b544f31e4e71882815d35fb3c6f5 951 SUPERFAMILY SSF63411 275 453 4.62E-32 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_RS10370 ddb6b544f31e4e71882815d35fb3c6f5 951 PANTHER PTHR11851:SF136 31 828 2.5E-151 T 20-04-2016 AMC99_RS10370 ddb6b544f31e4e71882815d35fb3c6f5 951 Gene3D G3DSA:3.30.830.10 43 257 2.4E-48 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMC99_RS10370 ddb6b544f31e4e71882815d35fb3c6f5 951 SUPERFAMILY SSF63411 41 254 1.66E-53 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_RS10370 ddb6b544f31e4e71882815d35fb3c6f5 951 SUPERFAMILY SSF63411 732 930 4.62E-37 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_RS10370 ddb6b544f31e4e71882815d35fb3c6f5 951 Pfam PF00675 Insulinase (Peptidase family M16) 55 170 5.7E-16 T 20-04-2016 IPR011765 Peptidase M16, N-terminal AMC99_RS10370 ddb6b544f31e4e71882815d35fb3c6f5 951 Pfam PF00675 Insulinase (Peptidase family M16) 519 628 1.3E-11 T 20-04-2016 IPR011765 Peptidase M16, N-terminal AMC99_RS10370 ddb6b544f31e4e71882815d35fb3c6f5 951 SUPERFAMILY SSF63411 507 710 2.57E-45 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_RS10370 ddb6b544f31e4e71882815d35fb3c6f5 951 PANTHER PTHR11851 31 828 2.5E-151 T 20-04-2016 AMC99_RS10370 ddb6b544f31e4e71882815d35fb3c6f5 951 Gene3D G3DSA:3.30.830.10 273 445 6.9E-25 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMC99_RS10370 ddb6b544f31e4e71882815d35fb3c6f5 951 Gene3D G3DSA:3.30.830.10 733 915 1.8E-28 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMC99_RS10370 ddb6b544f31e4e71882815d35fb3c6f5 951 Pfam PF05193 Peptidase M16 inactive domain 672 843 3.9E-28 T 20-04-2016 IPR007863 Peptidase M16, C-terminal AMC99_RS10370 ddb6b544f31e4e71882815d35fb3c6f5 951 Pfam PF05193 Peptidase M16 inactive domain 210 387 3.9E-29 T 20-04-2016 IPR007863 Peptidase M16, C-terminal AMC99_RS10370 ddb6b544f31e4e71882815d35fb3c6f5 951 Gene3D G3DSA:3.30.830.10 511 714 5.0E-38 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMC99_RS00720 91de5bf00c6c30dee08ecdbfaa496fd5 363 Gene3D G3DSA:1.10.620.20 42 258 6.0E-14 T 20-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 AMC99_RS00720 91de5bf00c6c30dee08ecdbfaa496fd5 363 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 44 262 7.8E-17 T 20-04-2016 IPR025859 P-aminobenzoate N-oxygenase AurF AMC99_RS00720 91de5bf00c6c30dee08ecdbfaa496fd5 363 SUPERFAMILY SSF47240 96 261 1.04E-43 T 20-04-2016 IPR009078 Ferritin-like superfamily AMC99_RS01775 9b06560daddab585848661e6ead22b0f 369 Gene3D G3DSA:2.40.110.10 122 210 1.6E-14 T 20-04-2016 AMC99_RS01775 9b06560daddab585848661e6ead22b0f 369 SUPERFAMILY SSF56645 1 218 1.24E-45 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS01775 9b06560daddab585848661e6ead22b0f 369 SUPERFAMILY SSF47203 224 365 1.4E-33 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS01775 9b06560daddab585848661e6ead22b0f 369 Gene3D G3DSA:1.10.540.10 1 118 5.0E-19 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS01775 9b06560daddab585848661e6ead22b0f 369 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 208 1.9E-8 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS01775 9b06560daddab585848661e6ead22b0f 369 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 226 363 6.6E-24 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS01775 9b06560daddab585848661e6ead22b0f 369 PANTHER PTHR10909 1 363 2.4E-60 T 20-04-2016 AMC99_RS01775 9b06560daddab585848661e6ead22b0f 369 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 1.0E-15 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS01775 9b06560daddab585848661e6ead22b0f 369 PANTHER PTHR10909:SF341 1 363 2.4E-60 T 20-04-2016 AMC99_RS01775 9b06560daddab585848661e6ead22b0f 369 Gene3D G3DSA:1.20.140.10 211 365 4.0E-31 T 20-04-2016 AMC99_RS05575 7783ca230bd2f6a4d3daebb9d337635b 180 PANTHER PTHR10334 5 171 2.1E-38 T 20-04-2016 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related AMC99_RS05575 7783ca230bd2f6a4d3daebb9d337635b 180 PRINTS PR00838 Venom allergen 5 signature 131 150 7.5E-7 T 20-04-2016 IPR002413 Ves allergen AMC99_RS05575 7783ca230bd2f6a4d3daebb9d337635b 180 PRINTS PR00838 Venom allergen 5 signature 53 71 7.5E-7 T 20-04-2016 IPR002413 Ves allergen AMC99_RS05575 7783ca230bd2f6a4d3daebb9d337635b 180 PRINTS PR00837 Allergen V5/Tpx-1 family signature 132 148 1.9E-12 T 20-04-2016 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related AMC99_RS05575 7783ca230bd2f6a4d3daebb9d337635b 180 PRINTS PR00837 Allergen V5/Tpx-1 family signature 158 171 1.9E-12 T 20-04-2016 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related AMC99_RS05575 7783ca230bd2f6a4d3daebb9d337635b 180 PRINTS PR00837 Allergen V5/Tpx-1 family signature 53 71 1.9E-12 T 20-04-2016 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related AMC99_RS05575 7783ca230bd2f6a4d3daebb9d337635b 180 SMART SM00198 32 171 2.5E-32 T 20-04-2016 IPR014044 CAP domain AMC99_RS05575 7783ca230bd2f6a4d3daebb9d337635b 180 SUPERFAMILY SSF55797 31 174 1.57E-35 T 20-04-2016 IPR014044 CAP domain AMC99_RS05575 7783ca230bd2f6a4d3daebb9d337635b 180 Pfam PF00188 Cysteine-rich secretory protein family 38 163 5.6E-17 T 20-04-2016 IPR014044 CAP domain AMC99_RS05575 7783ca230bd2f6a4d3daebb9d337635b 180 Gene3D G3DSA:3.40.33.10 32 172 6.6E-36 T 20-04-2016 IPR014044 CAP domain AMC99_RS05575 7783ca230bd2f6a4d3daebb9d337635b 180 ProSitePatterns PS01009 CRISP family signature 1. 133 143 - T 20-04-2016 IPR018244 Allergen V5/Tpx-1-related, conserved site GO:0005576 AMC99_RS02275 7b8155d2bdeaa602586153be8f0dc388 269 Gene3D G3DSA:3.10.129.10 3 86 2.1E-30 T 20-04-2016 IPR029069 HotDog domain AMC99_RS02275 7b8155d2bdeaa602586153be8f0dc388 269 Pfam PF13622 Thioesterase-like superfamily 4 253 1.9E-52 T 20-04-2016 AMC99_RS02275 7b8155d2bdeaa602586153be8f0dc388 269 Gene3D G3DSA:3.10.129.10 115 256 9.7E-46 T 20-04-2016 IPR029069 HotDog domain AMC99_RS02275 7b8155d2bdeaa602586153be8f0dc388 269 SUPERFAMILY SSF54637 2 83 4.1E-25 T 20-04-2016 IPR029069 HotDog domain AMC99_RS02275 7b8155d2bdeaa602586153be8f0dc388 269 PANTHER PTHR11066 2 269 1.4E-79 T 20-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 AMC99_RS02275 7b8155d2bdeaa602586153be8f0dc388 269 SUPERFAMILY SSF54637 116 256 1.08E-41 T 20-04-2016 IPR029069 HotDog domain AMC99_RS11820 dfc1dab9fa46428181da2ecfefc1b0f7 446 Gene3D G3DSA:1.10.630.10 49 444 1.1E-99 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS11820 dfc1dab9fa46428181da2ecfefc1b0f7 446 SUPERFAMILY SSF48264 44 444 1.28E-83 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS11820 dfc1dab9fa46428181da2ecfefc1b0f7 446 PANTHER PTHR11712 46 445 4.5E-102 T 20-04-2016 AMC99_RS11820 dfc1dab9fa46428181da2ecfefc1b0f7 446 Pfam PF00067 Cytochrome P450 239 412 2.6E-23 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS11820 dfc1dab9fa46428181da2ecfefc1b0f7 446 PANTHER PTHR11712:SF189 46 445 4.5E-102 T 20-04-2016 AMC99_RS11820 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 336 363 8.3E-38 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11820 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 195 210 8.3E-38 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11820 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 395 406 8.3E-38 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11820 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 239 261 8.3E-38 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11820 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 364 379 8.3E-38 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11820 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 132 143 8.3E-38 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11820 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 386 395 8.3E-38 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11820 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 319 330 8.3E-38 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11820 dfc1dab9fa46428181da2ecfefc1b0f7 446 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 388 397 - T 20-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 AMC99_RS01555 a3f46617d842180e351447c6f7d658af 393 PANTHER PTHR33529 1 377 6.0E-40 T 20-04-2016 AMC99_RS01555 a3f46617d842180e351447c6f7d658af 393 Pfam PF03739 Predicted permease YjgP/YjgQ family 2 348 2.9E-56 T 20-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 AMC99_RS06970 fdde8eeda752e4e5d62e316f8921b77e 189 Pfam PF00430 ATP synthase B/B' CF(0) 38 169 2.9E-19 T 20-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMC99_RS06970 fdde8eeda752e4e5d62e316f8921b77e 189 Hamap MF_01398 ATP synthase subunit b [atpF]. 33 189 10.782 T 20-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMC99_RS07360 068a2a98cb9e4a6c164c7415e72bf98c 414 Gene3D G3DSA:3.30.559.10 173 411 2.5E-91 T 20-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain AMC99_RS07360 068a2a98cb9e4a6c164c7415e72bf98c 414 PANTHER PTHR23151:SF8 2 414 8.2E-195 T 20-04-2016 AMC99_RS07360 068a2a98cb9e4a6c164c7415e72bf98c 414 SUPERFAMILY SSF47005 107 152 5.75E-12 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMC99_RS07360 068a2a98cb9e4a6c164c7415e72bf98c 414 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 413 7.4E-169 T 20-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 AMC99_RS07360 068a2a98cb9e4a6c164c7415e72bf98c 414 Gene3D G3DSA:2.40.50.100 1 95 1.5E-26 T 20-04-2016 AMC99_RS07360 068a2a98cb9e4a6c164c7415e72bf98c 414 Gene3D G3DSA:4.10.320.10 115 154 5.4E-17 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMC99_RS07360 068a2a98cb9e4a6c164c7415e72bf98c 414 PANTHER PTHR23151 2 414 8.2E-195 T 20-04-2016 AMC99_RS07360 068a2a98cb9e4a6c164c7415e72bf98c 414 Pfam PF02817 e3 binding domain 115 147 6.4E-13 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMC99_RS07360 068a2a98cb9e4a6c164c7415e72bf98c 414 SUPERFAMILY SSF51230 1 90 4.35E-26 T 20-04-2016 IPR011053 Single hybrid motif AMC99_RS07360 068a2a98cb9e4a6c164c7415e72bf98c 414 Pfam PF00364 Biotin-requiring enzyme 4 75 5.6E-18 T 20-04-2016 IPR000089 Biotin/lipoyl attachment AMC99_RS07360 068a2a98cb9e4a6c164c7415e72bf98c 414 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 20-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMC99_RS07360 068a2a98cb9e4a6c164c7415e72bf98c 414 SUPERFAMILY SSF52777 184 413 2.76E-88 T 20-04-2016 AMC99_RS07360 068a2a98cb9e4a6c164c7415e72bf98c 414 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 183 411 8.9E-81 T 20-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 AMC99_RS09960 5e524ef8312f9a05f8b03c0d5d783058 315 Gene3D G3DSA:1.25.40.10 193 287 3.0E-4 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS09960 5e524ef8312f9a05f8b03c0d5d783058 315 SUPERFAMILY SSF48452 191 295 1.81E-5 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS02380 afa9dcf8dbd61790ff4728f1e5357857 212 Pfam PF12408 Ribose-5-phosphate isomerase 164 210 3.5E-21 T 20-04-2016 IPR022133 Ribose-5-phosphate isomerase, C-terminal AMC99_RS02380 afa9dcf8dbd61790ff4728f1e5357857 212 Gene3D G3DSA:3.40.1400.10 1 210 8.4E-85 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMC99_RS02380 afa9dcf8dbd61790ff4728f1e5357857 212 SUPERFAMILY SSF89623 1 160 7.46E-35 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMC99_RS02380 afa9dcf8dbd61790ff4728f1e5357857 212 Pfam PF02502 Ribose/Galactose Isomerase 3 114 8.7E-26 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMC99_RS02380 afa9dcf8dbd61790ff4728f1e5357857 212 PANTHER PTHR30345 1 210 1.5E-28 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMC99_RS04985 75f7490f27a3000bba2ea2c44cd325f8 463 Pfam PF07396 Phosphate-selective porin O and P 113 463 4.4E-60 T 20-04-2016 IPR010870 Phosphate-selective porin O/P AMC99_RS04985 75f7490f27a3000bba2ea2c44cd325f8 463 SUPERFAMILY SSF56935 106 360 8.97E-13 T 20-04-2016 AMC99_RS04985 75f7490f27a3000bba2ea2c44cd325f8 463 SUPERFAMILY SSF56935 387 463 8.97E-13 T 20-04-2016 AMC99_RS04985 75f7490f27a3000bba2ea2c44cd325f8 463 Gene3D G3DSA:2.40.160.10 92 463 3.1E-96 T 20-04-2016 IPR023614 Porin domain AMC99_RS13335 60cd1e1349c108c1afee7a7c34798c4f 208 Pfam PF00027 Cyclic nucleotide-binding domain 21 106 8.9E-14 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain AMC99_RS13335 60cd1e1349c108c1afee7a7c34798c4f 208 SMART SM00419 150 198 7.8E-6 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_RS13335 60cd1e1349c108c1afee7a7c34798c4f 208 SUPERFAMILY SSF51206 2 129 2.36E-24 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like AMC99_RS13335 60cd1e1349c108c1afee7a7c34798c4f 208 Gene3D G3DSA:1.10.10.10 140 205 3.1E-10 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS13335 60cd1e1349c108c1afee7a7c34798c4f 208 Gene3D G3DSA:2.60.120.10 2 128 7.6E-21 T 20-04-2016 IPR014710 RmlC-like jelly roll fold AMC99_RS13335 60cd1e1349c108c1afee7a7c34798c4f 208 PANTHER PTHR24567 2 206 2.3E-29 T 20-04-2016 AMC99_RS13335 60cd1e1349c108c1afee7a7c34798c4f 208 SUPERFAMILY SSF46785 139 204 4.26E-11 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS13335 60cd1e1349c108c1afee7a7c34798c4f 208 Pfam PF13545 Crp-like helix-turn-helix domain 140 205 1.7E-12 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_RS13335 60cd1e1349c108c1afee7a7c34798c4f 208 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 171 187 2.2E-5 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMC99_RS13335 60cd1e1349c108c1afee7a7c34798c4f 208 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 157 171 2.2E-5 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMC99_RS13335 60cd1e1349c108c1afee7a7c34798c4f 208 SMART SM00100 2 120 3.2E-19 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain AMC99_RS09135 e6c14c798cbfc0499afa3d39d2a73488 495 Gene3D G3DSA:3.40.1190.10 101 333 3.7E-65 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09135 e6c14c798cbfc0499afa3d39d2a73488 495 SUPERFAMILY SSF53244 330 488 2.22E-40 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS09135 e6c14c798cbfc0499afa3d39d2a73488 495 SUPERFAMILY SSF63418 10 94 1.27E-16 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09135 e6c14c798cbfc0499afa3d39d2a73488 495 Pfam PF01225 Mur ligase family, catalytic domain 22 80 2.7E-5 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09135 e6c14c798cbfc0499afa3d39d2a73488 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 489 29.499 T 20-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 AMC99_RS09135 e6c14c798cbfc0499afa3d39d2a73488 495 Gene3D G3DSA:3.90.190.20 334 481 8.9E-48 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS09135 e6c14c798cbfc0499afa3d39d2a73488 495 Gene3D G3DSA:3.40.1390.10 8 94 7.9E-16 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09135 e6c14c798cbfc0499afa3d39d2a73488 495 PANTHER PTHR23135 9 487 9.5E-137 T 20-04-2016 AMC99_RS09135 e6c14c798cbfc0499afa3d39d2a73488 495 SUPERFAMILY SSF53623 100 329 2.88E-64 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09135 e6c14c798cbfc0499afa3d39d2a73488 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 330 420 6.8E-20 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS09135 e6c14c798cbfc0499afa3d39d2a73488 495 Pfam PF08245 Mur ligase middle domain 104 309 1.1E-42 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09135 e6c14c798cbfc0499afa3d39d2a73488 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 19 488 1.1E-126 T 20-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 AMC99_RS09135 e6c14c798cbfc0499afa3d39d2a73488 495 PANTHER PTHR23135:SF4 9 487 9.5E-137 T 20-04-2016 AMC99_RS06730 40037835f046905963414e9ae0cfc8c6 298 PANTHER PTHR10992:SF793 18 297 1.3E-83 T 20-04-2016 AMC99_RS06730 40037835f046905963414e9ae0cfc8c6 298 Gene3D G3DSA:3.40.50.1820 5 297 3.2E-80 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS06730 40037835f046905963414e9ae0cfc8c6 298 PANTHER PTHR10992 18 297 1.3E-83 T 20-04-2016 AMC99_RS06730 40037835f046905963414e9ae0cfc8c6 298 PRINTS PR00412 Epoxide hydrolase signature 239 255 1.8E-25 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS06730 40037835f046905963414e9ae0cfc8c6 298 PRINTS PR00412 Epoxide hydrolase signature 63 78 1.8E-25 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS06730 40037835f046905963414e9ae0cfc8c6 298 PRINTS PR00412 Epoxide hydrolase signature 272 294 1.8E-25 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS06730 40037835f046905963414e9ae0cfc8c6 298 PRINTS PR00412 Epoxide hydrolase signature 109 122 1.8E-25 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS06730 40037835f046905963414e9ae0cfc8c6 298 PRINTS PR00412 Epoxide hydrolase signature 43 61 1.8E-25 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS06730 40037835f046905963414e9ae0cfc8c6 298 Pfam PF00561 alpha/beta hydrolase fold 40 280 8.5E-25 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS06730 40037835f046905963414e9ae0cfc8c6 298 SUPERFAMILY SSF53474 14 297 1.47E-70 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS08525 b941cd877bd8e1791077c81c4229ca63 94 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 7 90 1.1E-35 T 20-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 AMC99_RS08525 b941cd877bd8e1791077c81c4229ca63 94 PANTHER PTHR10160 2 92 4.2E-34 T 20-04-2016 AMC99_RS04980 b91fa42decc0c8fb40270e6d9f4bae2b 348 PANTHER PTHR30570 32 339 1.9E-33 T 20-04-2016 AMC99_RS04980 b91fa42decc0c8fb40270e6d9f4bae2b 348 Gene3D G3DSA:3.40.190.10 1 101 9.7E-5 T 20-04-2016 AMC99_RS04980 b91fa42decc0c8fb40270e6d9f4bae2b 348 SUPERFAMILY SSF53850 31 337 6.7E-64 T 20-04-2016 AMC99_RS04980 b91fa42decc0c8fb40270e6d9f4bae2b 348 Gene3D G3DSA:3.40.190.10 118 282 8.7E-22 T 20-04-2016 AMC99_RS04980 b91fa42decc0c8fb40270e6d9f4bae2b 348 Pfam PF12849 PBP superfamily domain 26 303 9.4E-40 T 20-04-2016 IPR024370 PBP domain AMC99_RS07735 f53f94a66e7f814f0d75f6977cdfb833 356 PANTHER PTHR11835:SF35 2 355 3.4E-171 T 20-04-2016 AMC99_RS07735 f53f94a66e7f814f0d75f6977cdfb833 356 Gene3D G3DSA:3.40.718.10 2 352 3.9E-121 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMC99_RS07735 f53f94a66e7f814f0d75f6977cdfb833 356 PANTHER PTHR11835 2 355 3.4E-171 T 20-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMC99_RS07735 f53f94a66e7f814f0d75f6977cdfb833 356 SUPERFAMILY SSF53659 2 352 5.76E-113 T 20-04-2016 AMC99_RS07735 f53f94a66e7f814f0d75f6977cdfb833 356 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 352 46.307 T 20-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 AMC99_RS07735 f53f94a66e7f814f0d75f6977cdfb833 356 SMART SM01329 2 348 2.8E-180 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMC99_RS07735 f53f94a66e7f814f0d75f6977cdfb833 356 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 238 257 - T 20-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMC99_RS07735 f53f94a66e7f814f0d75f6977cdfb833 356 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 348 8.8E-121 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMC99_RS07735 f53f94a66e7f814f0d75f6977cdfb833 356 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 350 2.4E-132 T 20-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 AMC99_RS05495 ceb5e23e16da6e1e79675557d7eedaa6 465 PANTHER PTHR32089 12 283 2.2E-34 T 20-04-2016 AMC99_RS05495 ceb5e23e16da6e1e79675557d7eedaa6 465 Gene3D G3DSA:1.10.287.950 49 253 2.3E-40 T 20-04-2016 AMC99_RS05495 ceb5e23e16da6e1e79675557d7eedaa6 465 SUPERFAMILY SSF58104 29 287 9.81E-44 T 20-04-2016 AMC99_RS05495 ceb5e23e16da6e1e79675557d7eedaa6 465 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 205 234 1.4E-17 T 20-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMC99_RS05495 ceb5e23e16da6e1e79675557d7eedaa6 465 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 157 186 1.4E-17 T 20-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMC99_RS05495 ceb5e23e16da6e1e79675557d7eedaa6 465 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 128 155 1.4E-17 T 20-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMC99_RS05495 ceb5e23e16da6e1e79675557d7eedaa6 465 SMART SM00283 30 293 3.5E-21 T 20-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMC99_RS05495 ceb5e23e16da6e1e79675557d7eedaa6 465 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 109 283 6.0E-28 T 20-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMC99_RS10710 a5e245b254da142326dbd62486fedfcd 69 Hamap MF_00422 Protein translocase subunit SecE [secE]. 9 64 12.654 T 20-04-2016 IPR022943 Preprotein translocase subunit SecE AMC99_RS10710 a5e245b254da142326dbd62486fedfcd 69 Gene3D G3DSA:1.20.5.1030 9 66 3.5E-22 T 20-04-2016 AMC99_RS10710 a5e245b254da142326dbd62486fedfcd 69 PANTHER PTHR33910 12 69 7.6E-16 T 20-04-2016 AMC99_RS10710 a5e245b254da142326dbd62486fedfcd 69 PRINTS PR01650 Bacterial translocase SecE signature 32 52 4.4E-6 T 20-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AMC99_RS10710 a5e245b254da142326dbd62486fedfcd 69 PRINTS PR01650 Bacterial translocase SecE signature 52 68 4.4E-6 T 20-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AMC99_RS10710 a5e245b254da142326dbd62486fedfcd 69 PRINTS PR01650 Bacterial translocase SecE signature 8 28 4.4E-6 T 20-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AMC99_RS10710 a5e245b254da142326dbd62486fedfcd 69 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 13 66 7.8E-19 T 20-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AMC99_RS10710 a5e245b254da142326dbd62486fedfcd 69 PANTHER PTHR33910:SF1 12 69 7.6E-16 T 20-04-2016 AMC99_RS10710 a5e245b254da142326dbd62486fedfcd 69 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 13 65 3.5E-19 T 20-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 AMC99_RS07090 f5c18259ece20121b0348802657baffd 466 PANTHER PTHR24031 1 463 1.4E-176 T 20-04-2016 AMC99_RS07090 f5c18259ece20121b0348802657baffd 466 Gene3D G3DSA:3.40.50.300 210 366 7.2E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07090 f5c18259ece20121b0348802657baffd 466 Pfam PF00271 Helicase conserved C-terminal domain 232 337 2.9E-29 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS07090 f5c18259ece20121b0348802657baffd 466 SUPERFAMILY SSF52540 74 355 4.03E-73 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07090 f5c18259ece20121b0348802657baffd 466 PANTHER PTHR24031:SF261 1 463 1.4E-176 T 20-04-2016 AMC99_RS07090 f5c18259ece20121b0348802657baffd 466 Pfam PF00270 DEAD/DEAH box helicase 25 194 1.9E-50 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_RS07090 f5c18259ece20121b0348802657baffd 466 Gene3D G3DSA:3.40.50.300 1 209 2.9E-80 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07090 f5c18259ece20121b0348802657baffd 466 SMART SM00490 256 337 1.7E-33 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS07090 f5c18259ece20121b0348802657baffd 466 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 20-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMC99_RS07090 f5c18259ece20121b0348802657baffd 466 SMART SM00487 20 220 1.5E-62 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_RS00060 30454555c9274f55e5961d36ad290e3a 309 SMART SM00267 131 296 1.5E-19 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS00060 30454555c9274f55e5961d36ad290e3a 309 Gene3D G3DSA:3.30.70.270 144 297 2.0E-29 T 20-04-2016 AMC99_RS00060 30454555c9274f55e5961d36ad290e3a 309 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 288 3.8E-24 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS00060 30454555c9274f55e5961d36ad290e3a 309 SUPERFAMILY SSF55073 147 297 2.51E-26 T 20-04-2016 IPR029787 Nucleotide cyclase AMC99_RS00060 30454555c9274f55e5961d36ad290e3a 309 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 142 294 2.0E-16 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS06750 64782ad3140fe7861a17410fd051589d 375 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 255 374 8.4E-30 T 20-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS06750 64782ad3140fe7861a17410fd051589d 375 SUPERFAMILY SSF55979 128 253 4.85E-24 T 20-04-2016 AMC99_RS06750 64782ad3140fe7861a17410fd051589d 375 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 2.4E-33 T 20-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS06750 64782ad3140fe7861a17410fd051589d 375 PANTHER PTHR30478 2 375 1.8E-116 T 20-04-2016 AMC99_RS06750 64782ad3140fe7861a17410fd051589d 375 SUPERFAMILY SSF55979 255 375 1.1E-34 T 20-04-2016 AMC99_RS06750 64782ad3140fe7861a17410fd051589d 375 SUPERFAMILY SSF55979 1 118 2.47E-26 T 20-04-2016 AMC99_RS06750 64782ad3140fe7861a17410fd051589d 375 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 252 4.9E-30 T 20-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS06750 64782ad3140fe7861a17410fd051589d 375 PIRSF PIRSF000804 1 375 2.0E-117 T 20-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS06750 64782ad3140fe7861a17410fd051589d 375 Gene3D G3DSA:3.10.150.10 127 257 1.2E-34 T 20-04-2016 AMC99_RS06750 64782ad3140fe7861a17410fd051589d 375 Gene3D G3DSA:3.10.150.10 1 119 2.5E-30 T 20-04-2016 AMC99_RS06750 64782ad3140fe7861a17410fd051589d 375 Gene3D G3DSA:3.10.150.10 258 375 6.6E-35 T 20-04-2016 AMC99_RS06750 64782ad3140fe7861a17410fd051589d 375 SMART SM00480 17 371 2.1E-121 T 20-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS06750 64782ad3140fe7861a17410fd051589d 375 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 374 8.3E-89 T 20-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS06380 fb0169a87b12caba96f6adeff6ed41bd 619 SUPERFAMILY SSF52016 421 614 7.85E-60 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMC99_RS06380 fb0169a87b12caba96f6adeff6ed41bd 619 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 20-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS06380 fb0169a87b12caba96f6adeff6ed41bd 619 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 611 45.053 T 20-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS06380 fb0169a87b12caba96f6adeff6ed41bd 619 SUPERFAMILY SSF143975 4 420 2.48E-135 T 20-04-2016 AMC99_RS06380 fb0169a87b12caba96f6adeff6ed41bd 619 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 611 2.2E-251 T 20-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS06380 fb0169a87b12caba96f6adeff6ed41bd 619 Pfam PF00920 Dehydratase family 34 608 6.2E-220 T 20-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS06380 fb0169a87b12caba96f6adeff6ed41bd 619 PANTHER PTHR21000:SF11 1 371 0.0 T 20-04-2016 AMC99_RS06380 fb0169a87b12caba96f6adeff6ed41bd 619 PANTHER PTHR21000:SF11 406 617 0.0 T 20-04-2016 AMC99_RS06380 fb0169a87b12caba96f6adeff6ed41bd 619 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 20-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS06380 fb0169a87b12caba96f6adeff6ed41bd 619 PANTHER PTHR21000 1 371 0.0 T 20-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS06380 fb0169a87b12caba96f6adeff6ed41bd 619 PANTHER PTHR21000 406 617 0.0 T 20-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS11075 c48d13f3f401fbeab9a537418a8161cb 391 SUPERFAMILY SSF51735 8 144 9.45E-14 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS11075 c48d13f3f401fbeab9a537418a8161cb 391 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 8 135 7.1E-14 T 20-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AMC99_RS11075 c48d13f3f401fbeab9a537418a8161cb 391 PANTHER PTHR12286:SF4 1 391 2.1E-119 T 20-04-2016 AMC99_RS11075 c48d13f3f401fbeab9a537418a8161cb 391 PANTHER PTHR12286 1 391 2.1E-119 T 20-04-2016 AMC99_RS11075 c48d13f3f401fbeab9a537418a8161cb 391 Gene3D G3DSA:3.40.50.720 8 172 9.9E-19 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09180 203eda28cdeaf9e551b150bc97992ce0 205 SUPERFAMILY SSF48150 37 200 5.76E-37 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMC99_RS09180 203eda28cdeaf9e551b150bc97992ce0 205 Gene3D G3DSA:1.10.340.30 41 147 1.4E-28 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMC99_RS09180 203eda28cdeaf9e551b150bc97992ce0 205 PANTHER PTHR10242:SF0 12 199 6.1E-43 T 20-04-2016 AMC99_RS09180 203eda28cdeaf9e551b150bc97992ce0 205 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 46 187 5.5E-16 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMC99_RS09180 203eda28cdeaf9e551b150bc97992ce0 205 Gene3D G3DSA:1.10.1670.10 150 200 3.1E-9 T 20-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMC99_RS09180 203eda28cdeaf9e551b150bc97992ce0 205 SMART SM00478 49 203 3.1E-5 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMC99_RS09180 203eda28cdeaf9e551b150bc97992ce0 205 PANTHER PTHR10242 12 199 6.1E-43 T 20-04-2016 AMC99_RS12645 6f9f1076fd7d2e176fa1d40ced0c6030 445 SUPERFAMILY SSF52096 41 114 7.95E-76 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS12645 6f9f1076fd7d2e176fa1d40ced0c6030 445 SUPERFAMILY SSF52096 188 375 7.95E-76 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS12645 6f9f1076fd7d2e176fa1d40ced0c6030 445 PANTHER PTHR32060 51 437 5.7E-113 T 20-04-2016 AMC99_RS12645 6f9f1076fd7d2e176fa1d40ced0c6030 445 Gene3D G3DSA:3.30.750.44 45 101 5.4E-7 T 20-04-2016 AMC99_RS12645 6f9f1076fd7d2e176fa1d40ced0c6030 445 Pfam PF13180 PDZ domain 97 176 7.3E-14 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS12645 6f9f1076fd7d2e176fa1d40ced0c6030 445 SMART SM00245 169 364 1.9E-68 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 AMC99_RS12645 6f9f1076fd7d2e176fa1d40ced0c6030 445 Pfam PF03572 Peptidase family S41 194 363 1.4E-51 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 AMC99_RS12645 6f9f1076fd7d2e176fa1d40ced0c6030 445 SMART SM00228 96 167 1.8E-14 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS12645 6f9f1076fd7d2e176fa1d40ced0c6030 445 Gene3D G3DSA:3.90.226.10 178 366 1.2E-63 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS12645 6f9f1076fd7d2e176fa1d40ced0c6030 445 Gene3D G3DSA:3.90.226.10 415 435 1.2E-63 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS12645 6f9f1076fd7d2e176fa1d40ced0c6030 445 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 49 371 6.5E-100 T 20-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AMC99_RS12645 6f9f1076fd7d2e176fa1d40ced0c6030 445 Gene3D G3DSA:2.30.42.10 102 177 3.0E-25 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS12645 6f9f1076fd7d2e176fa1d40ced0c6030 445 SUPERFAMILY SSF50156 88 178 4.79E-18 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 PANTHER PTHR10169:SF48 451 754 0.0 T 20-04-2016 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 SUPERFAMILY SSF101904 784 910 9.59E-88 T 20-04-2016 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 SUPERFAMILY SSF101904 534 747 9.59E-88 T 20-04-2016 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 SMART SM00434 20 500 2.3E-252 T 20-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 PANTHER PTHR10169:SF48 783 857 0.0 T 20-04-2016 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 PANTHER PTHR10169 4 422 0.0 T 20-04-2016 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 19 897 0.0 T 20-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 PANTHER PTHR10169 783 857 0.0 T 20-04-2016 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 PANTHER PTHR10169 451 754 0.0 T 20-04-2016 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 11 902 26.971 T 20-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 Gene3D G3DSA:2.120.10.90 784 898 3.3E-107 T 20-04-2016 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 Gene3D G3DSA:2.120.10.90 531 746 3.3E-107 T 20-04-2016 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 Gene3D G3DSA:1.10.268.10 371 497 8.9E-41 T 20-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 787 821 2.7E-8 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 540 586 7.1E-15 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 591 638 1.4E-7 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 843 898 6.2E-4 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 694 2.3 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 698 745 5.3E-12 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 Gene3D G3DSA:3.90.199.10 43 225 1.6E-78 T 20-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 Gene3D G3DSA:3.30.1360.40 245 341 3.9E-32 T 20-04-2016 IPR024946 Arginine repressor C-terminal-like domain AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 SUPERFAMILY SSF56719 39 522 1.83E-167 T 20-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 PANTHER PTHR10169:SF48 4 422 0.0 T 20-04-2016 AMC99_RS05835 5b19c324262474054f0cc211e47056e8 942 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 41 507 9.9E-140 T 20-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS04915 cb600c5673a8583fee0e677766afc763 254 Gene3D G3DSA:3.40.50.300 65 163 9.1E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04915 cb600c5673a8583fee0e677766afc763 254 SUPERFAMILY SSF52540 65 163 3.66E-8 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08480 6710af9156f81ffae13d0d270f169a65 518 PANTHER PTHR24096 7 506 2.1E-151 T 20-04-2016 AMC99_RS08480 6710af9156f81ffae13d0d270f169a65 518 Pfam PF13193 AMP-binding enzyme C-terminal domain 424 499 8.9E-20 T 20-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMC99_RS08480 6710af9156f81ffae13d0d270f169a65 518 SUPERFAMILY SSF56801 6 513 5.63E-144 T 20-04-2016 AMC99_RS08480 6710af9156f81ffae13d0d270f169a65 518 Gene3D G3DSA:3.40.50.980 11 166 2.4E-33 T 20-04-2016 AMC99_RS08480 6710af9156f81ffae13d0d270f169a65 518 Gene3D G3DSA:3.40.50.980 167 323 4.2E-34 T 20-04-2016 AMC99_RS08480 6710af9156f81ffae13d0d270f169a65 518 Gene3D G3DSA:3.30.300.30 410 510 8.2E-34 T 20-04-2016 AMC99_RS08480 6710af9156f81ffae13d0d270f169a65 518 Pfam PF00501 AMP-binding enzyme 15 415 4.4E-91 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMC99_RS08480 6710af9156f81ffae13d0d270f169a65 518 Gene3D G3DSA:2.30.38.10 333 405 5.0E-28 T 20-04-2016 AMC99_RS02950 4587f42ed46652371b4d4987b08c252e 206 SUPERFAMILY SSF143081 2 189 1.14E-43 T 20-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMC99_RS02950 4587f42ed46652371b4d4987b08c252e 206 Gene3D G3DSA:3.90.1680.10 1 179 7.2E-27 T 20-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMC99_RS02950 4587f42ed46652371b4d4987b08c252e 206 Pfam PF02586 SOS response associated peptidase (SRAP) 1 184 3.5E-20 T 20-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMC99_RS04110 5a99cbdd0b72ef4118517c294b4aa181 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 258 1.6E-65 T 20-04-2016 AMC99_RS04110 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.9E-38 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04110 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.9E-38 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04110 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.9E-38 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04110 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.9E-38 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04110 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.9E-38 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04110 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.9E-38 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04110 5a99cbdd0b72ef4118517c294b4aa181 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS04110 5a99cbdd0b72ef4118517c294b4aa181 260 Gene3D G3DSA:3.40.50.720 2 259 5.6E-86 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS04110 5a99cbdd0b72ef4118517c294b4aa181 260 PANTHER PTHR24321 3 259 9.1E-55 T 20-04-2016 AMC99_RS04110 5a99cbdd0b72ef4118517c294b4aa181 260 PANTHER PTHR24321:SF6 3 259 9.1E-55 T 20-04-2016 AMC99_RS04110 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.6E-11 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04110 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.6E-11 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04110 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.6E-11 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS04110 5a99cbdd0b72ef4118517c294b4aa181 260 SUPERFAMILY SSF51735 7 259 8.55E-81 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS04705 8626e24a04e00233e6c893395ec53e44 163 Gene3D G3DSA:3.40.50.270 10 157 9.1E-46 T 20-04-2016 AMC99_RS04705 8626e24a04e00233e6c893395ec53e44 163 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 11 150 4.4E-36 T 20-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AMC99_RS04705 8626e24a04e00233e6c893395ec53e44 163 PANTHER PTHR11717:SF7 1 159 1.9E-47 T 20-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMC99_RS04705 8626e24a04e00233e6c893395ec53e44 163 SMART SM00226 9 156 8.8E-41 T 20-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AMC99_RS04705 8626e24a04e00233e6c893395ec53e44 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 52 68 2.7E-22 T 20-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMC99_RS04705 8626e24a04e00233e6c893395ec53e44 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 86 101 2.7E-22 T 20-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMC99_RS04705 8626e24a04e00233e6c893395ec53e44 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 128 143 2.7E-22 T 20-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMC99_RS04705 8626e24a04e00233e6c893395ec53e44 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 11 28 2.7E-22 T 20-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMC99_RS04705 8626e24a04e00233e6c893395ec53e44 163 PANTHER PTHR11717 1 159 1.9E-47 T 20-04-2016 AMC99_RS04705 8626e24a04e00233e6c893395ec53e44 163 SUPERFAMILY SSF52788 10 157 6.93E-44 T 20-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AMC99_RS05820 0b56498eda12a3dcdb04c8152a836e58 217 PANTHER PTHR11002 3 205 1.6E-64 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS05820 0b56498eda12a3dcdb04c8152a836e58 217 SMART SM00947 35 207 7.8E-61 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS05820 0b56498eda12a3dcdb04c8152a836e58 217 PANTHER PTHR11002:SF7 3 205 1.6E-64 T 20-04-2016 AMC99_RS05820 0b56498eda12a3dcdb04c8152a836e58 217 Gene3D G3DSA:3.40.1050.10 6 215 1.4E-62 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS05820 0b56498eda12a3dcdb04c8152a836e58 217 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 47 54 - T 20-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS05820 0b56498eda12a3dcdb04c8152a836e58 217 SUPERFAMILY SSF53056 5 215 5.89E-59 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS05820 0b56498eda12a3dcdb04c8152a836e58 217 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 92 112 - T 20-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS05820 0b56498eda12a3dcdb04c8152a836e58 217 Pfam PF00484 Carbonic anhydrase 43 201 2.7E-46 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS11050 376f70a038e84b5903b453017e83e7f0 333 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 149 170 - T 20-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AMC99_RS11050 376f70a038e84b5903b453017e83e7f0 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 95 8.3E-8 T 20-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_RS11050 376f70a038e84b5903b453017e83e7f0 333 Gene3D G3DSA:3.40.50.720 154 265 8.8E-38 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS11050 376f70a038e84b5903b453017e83e7f0 333 SUPERFAMILY SSF51735 120 273 5.81E-44 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS11050 376f70a038e84b5903b453017e83e7f0 333 SMART SM00829 20 331 5.6E-36 T 20-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_RS11050 376f70a038e84b5903b453017e83e7f0 333 Gene3D G3DSA:3.90.180.10 13 153 9.1E-44 T 20-04-2016 IPR011032 GroES-like AMC99_RS11050 376f70a038e84b5903b453017e83e7f0 333 SUPERFAMILY SSF50129 14 158 9.59E-36 T 20-04-2016 IPR011032 GroES-like AMC99_RS11050 376f70a038e84b5903b453017e83e7f0 333 PANTHER PTHR11695 25 333 4.3E-114 T 20-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMC99_RS11050 376f70a038e84b5903b453017e83e7f0 333 Pfam PF00107 Zinc-binding dehydrogenase 160 265 2.3E-26 T 20-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_RS11050 376f70a038e84b5903b453017e83e7f0 333 PANTHER PTHR11695:SF605 25 333 4.3E-114 T 20-04-2016 AMC99_RS13090 fd002075611f83787ef675c7d84fa018 220 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 141 219 5.0E-19 T 20-04-2016 IPR006260 TonB, C-terminal GO:0006810 AMC99_RS13090 fd002075611f83787ef675c7d84fa018 220 SUPERFAMILY SSF74653 136 200 1.83E-15 T 20-04-2016 AMC99_RS13090 fd002075611f83787ef675c7d84fa018 220 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 142 219 2.1E-15 T 20-04-2016 IPR006260 TonB, C-terminal GO:0006810 AMC99_RS13090 fd002075611f83787ef675c7d84fa018 220 Gene3D G3DSA:3.30.1150.10 111 204 4.4E-15 T 20-04-2016 AMC99_RS08625 43de2dd25068e5705cf56881ca251d43 357 Pfam PF00266 Aminotransferase class-V 2 342 7.3E-47 T 20-04-2016 IPR000192 Aminotransferase class V domain AMC99_RS08625 43de2dd25068e5705cf56881ca251d43 357 SUPERFAMILY SSF53383 1 354 1.18E-69 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS08625 43de2dd25068e5705cf56881ca251d43 357 Gene3D G3DSA:3.40.640.10 14 232 3.4E-51 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS08625 43de2dd25068e5705cf56881ca251d43 357 PANTHER PTHR11601:SF45 1 353 2.6E-102 T 20-04-2016 AMC99_RS08625 43de2dd25068e5705cf56881ca251d43 357 Gene3D G3DSA:3.90.1150.10 233 349 3.5E-33 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS08625 43de2dd25068e5705cf56881ca251d43 357 PANTHER PTHR11601 1 353 2.6E-102 T 20-04-2016 AMC99_RS08625 43de2dd25068e5705cf56881ca251d43 357 PIRSF PIRSF005572 1 356 7.5E-87 T 20-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AMC99_RS10145 8641e610686d30bb27d49656c48a0960 324 Gene3D G3DSA:3.90.180.10 1 145 1.2E-40 T 20-04-2016 IPR011032 GroES-like AMC99_RS10145 8641e610686d30bb27d49656c48a0960 324 Gene3D G3DSA:3.40.50.720 146 261 3.1E-28 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS10145 8641e610686d30bb27d49656c48a0960 324 Pfam PF00107 Zinc-binding dehydrogenase 151 265 1.2E-24 T 20-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_RS10145 8641e610686d30bb27d49656c48a0960 324 SUPERFAMILY SSF50129 1 140 5.48E-35 T 20-04-2016 IPR011032 GroES-like AMC99_RS10145 8641e610686d30bb27d49656c48a0960 324 SMART SM00829 10 322 1.1E-44 T 20-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_RS10145 8641e610686d30bb27d49656c48a0960 324 PANTHER PTHR11695 15 324 4.6E-91 T 20-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMC99_RS10145 8641e610686d30bb27d49656c48a0960 324 SUPERFAMILY SSF51735 112 273 2.59E-44 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS10145 8641e610686d30bb27d49656c48a0960 324 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 20-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AMC99_RS10145 8641e610686d30bb27d49656c48a0960 324 PANTHER PTHR11695:SF31 15 324 4.6E-91 T 20-04-2016 AMC99_RS10145 8641e610686d30bb27d49656c48a0960 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 2.5E-8 T 20-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_RS11765 d1fcfc3fc448eb46dcda0a7bfba3e155 309 PANTHER PTHR10992 43 307 1.1E-19 T 20-04-2016 AMC99_RS11765 d1fcfc3fc448eb46dcda0a7bfba3e155 309 SUPERFAMILY SSF53474 42 306 1.72E-30 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS11765 d1fcfc3fc448eb46dcda0a7bfba3e155 309 Pfam PF12697 Alpha/beta hydrolase family 56 297 6.4E-15 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS11765 d1fcfc3fc448eb46dcda0a7bfba3e155 309 Gene3D G3DSA:3.40.50.1820 43 307 1.4E-32 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS11765 d1fcfc3fc448eb46dcda0a7bfba3e155 309 PANTHER PTHR10992:SF771 43 307 1.1E-19 T 20-04-2016 AMC99_RS12890 53d1942ec7a6fceb863c84b9d8ea464f 231 PRINTS PR01021 OMPA domain signature 144 159 1.6E-15 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_RS12890 53d1942ec7a6fceb863c84b9d8ea464f 231 PRINTS PR01021 OMPA domain signature 159 175 1.6E-15 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_RS12890 53d1942ec7a6fceb863c84b9d8ea464f 231 PRINTS PR01021 OMPA domain signature 114 136 1.6E-15 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_RS12890 53d1942ec7a6fceb863c84b9d8ea464f 231 Gene3D G3DSA:3.30.1330.60 107 216 2.1E-36 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS12890 53d1942ec7a6fceb863c84b9d8ea464f 231 Pfam PF00691 OmpA family 113 208 8.6E-24 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS12890 53d1942ec7a6fceb863c84b9d8ea464f 231 ProSitePatterns PS01068 OmpA-like domain. 146 190 - T 20-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AMC99_RS12890 53d1942ec7a6fceb863c84b9d8ea464f 231 SUPERFAMILY SSF103088 105 216 3.79E-35 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS12890 53d1942ec7a6fceb863c84b9d8ea464f 231 PANTHER PTHR30128 61 218 3.7E-35 T 20-04-2016 AMC99_RS12890 53d1942ec7a6fceb863c84b9d8ea464f 231 Pfam PF05433 Glycine zipper 2TM domain 38 78 3.5E-7 T 20-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 AMC99_RS06765 b17b9935405db72589767f361a6026e7 312 SUPERFAMILY SSF52151 1 124 4.71E-67 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMC99_RS06765 b17b9935405db72589767f361a6026e7 312 SUPERFAMILY SSF52151 194 308 4.71E-67 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMC99_RS06765 b17b9935405db72589767f361a6026e7 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 301 2.3E-33 T 20-04-2016 IPR020801 Polyketide synthase, acyl transferase domain AMC99_RS06765 b17b9935405db72589767f361a6026e7 312 PIRSF PIRSF000446 1 311 1.3E-80 T 20-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 AMC99_RS06765 b17b9935405db72589767f361a6026e7 312 PANTHER PTHR10982 1 311 2.6E-124 T 20-04-2016 AMC99_RS06765 b17b9935405db72589767f361a6026e7 312 Pfam PF00698 Acyl transferase domain 4 277 1.8E-39 T 20-04-2016 IPR014043 Acyl transferase AMC99_RS06765 b17b9935405db72589767f361a6026e7 312 SUPERFAMILY SSF55048 130 199 8.24E-17 T 20-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AMC99_RS06765 b17b9935405db72589767f361a6026e7 312 Gene3D G3DSA:3.40.366.10 3 124 1.3E-63 T 20-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AMC99_RS06765 b17b9935405db72589767f361a6026e7 312 Gene3D G3DSA:3.40.366.10 199 306 1.3E-63 T 20-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AMC99_RS06765 b17b9935405db72589767f361a6026e7 312 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 2 292 2.8E-83 T 20-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AMC99_RS06765 b17b9935405db72589767f361a6026e7 312 Gene3D G3DSA:3.30.70.250 127 198 7.6E-26 T 20-04-2016 AMC99_RS00920 a954b743b1de4e9300c1a4dc415b076d 148 SUPERFAMILY SSF53756 4 137 1.63E-5 T 20-04-2016 AMC99_RS00920 a954b743b1de4e9300c1a4dc415b076d 148 Pfam PF08660 Oligosaccharide biosynthesis protein Alg14 like 54 137 3.7E-12 T 20-04-2016 IPR013969 Oligosaccharide biosynthesis protein Alg14-like AMC99_RS00920 a954b743b1de4e9300c1a4dc415b076d 148 Gene3D G3DSA:3.40.50.2000 53 138 2.5E-8 T 20-04-2016 AMC99_RS09545 e66ee25cefe08301b3f8536fd5c12710 498 PANTHER PTHR11659:SF0 12 497 3.1E-229 T 20-04-2016 AMC99_RS09545 e66ee25cefe08301b3f8536fd5c12710 498 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 12 498 35.307 T 20-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AMC99_RS09545 e66ee25cefe08301b3f8536fd5c12710 498 SMART SM00845 341 497 1.6E-52 T 20-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 AMC99_RS09545 e66ee25cefe08301b3f8536fd5c12710 498 Pfam PF02934 GatB/GatE catalytic domain 15 301 4.7E-112 T 20-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 AMC99_RS09545 e66ee25cefe08301b3f8536fd5c12710 498 Pfam PF02637 GatB domain 360 497 4.9E-38 T 20-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 AMC99_RS09545 e66ee25cefe08301b3f8536fd5c12710 498 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 158 172 - T 20-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 AMC99_RS09545 e66ee25cefe08301b3f8536fd5c12710 498 SUPERFAMILY SSF89095 364 497 5.23E-20 T 20-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AMC99_RS09545 e66ee25cefe08301b3f8536fd5c12710 498 Gene3D G3DSA:1.10.10.410 442 497 3.7E-5 T 20-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AMC99_RS09545 e66ee25cefe08301b3f8536fd5c12710 498 SUPERFAMILY SSF55931 14 309 4.64E-113 T 20-04-2016 AMC99_RS09545 e66ee25cefe08301b3f8536fd5c12710 498 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 12 497 1.1E-152 T 20-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AMC99_RS09545 e66ee25cefe08301b3f8536fd5c12710 498 PANTHER PTHR11659 12 497 3.1E-229 T 20-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 AMC99_RS09545 e66ee25cefe08301b3f8536fd5c12710 498 SUPERFAMILY SSF89095 310 361 2.88E-8 T 20-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AMC99_RS05935 8b1f51464d1446e0cd3da5199b0a2283 544 Hamap MF_01227 CTP synthase [pyrG]. 2 541 48.983 T 20-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMC99_RS05935 8b1f51464d1446e0cd3da5199b0a2283 544 SUPERFAMILY SSF52540 1 266 2.07E-116 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05935 8b1f51464d1446e0cd3da5199b0a2283 544 TIGRFAM TIGR00337 PyrG: CTP synthase 2 536 6.7E-221 T 20-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMC99_RS05935 8b1f51464d1446e0cd3da5199b0a2283 544 Pfam PF06418 CTP synthase N-terminus 3 264 2.7E-119 T 20-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMC99_RS05935 8b1f51464d1446e0cd3da5199b0a2283 544 Gene3D G3DSA:3.40.50.880 288 541 1.5E-88 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS05935 8b1f51464d1446e0cd3da5199b0a2283 544 Gene3D G3DSA:3.40.50.300 1 282 2.7E-124 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05935 8b1f51464d1446e0cd3da5199b0a2283 544 Pfam PF00117 Glutamine amidotransferase class-I 301 536 3.1E-55 T 20-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMC99_RS05935 8b1f51464d1446e0cd3da5199b0a2283 544 PANTHER PTHR11550 1 540 4.7E-299 T 20-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMC99_RS05935 8b1f51464d1446e0cd3da5199b0a2283 544 SUPERFAMILY SSF52317 289 540 2.29E-73 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS13040 02795515a1425b434dc434f99c736f11 271 Pfam PF09140 ATPase MipZ 9 259 6.5E-116 T 20-04-2016 IPR015223 ATPase MipZ AMC99_RS13040 02795515a1425b434dc434f99c736f11 271 SUPERFAMILY SSF52540 173 232 2.16E-28 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS13040 02795515a1425b434dc434f99c736f11 271 SUPERFAMILY SSF52540 8 145 2.16E-28 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS13040 02795515a1425b434dc434f99c736f11 271 Gene3D G3DSA:3.40.50.300 6 233 5.4E-28 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS13040 02795515a1425b434dc434f99c736f11 271 PANTHER PTHR13696 5 230 1.9E-23 T 20-04-2016 AMC99_RS13040 02795515a1425b434dc434f99c736f11 271 PANTHER PTHR13696:SF54 5 230 1.9E-23 T 20-04-2016 AMC99_RS07315 eee66ae61cb9842241add0177ae7953d 246 Gene3D G3DSA:3.40.50.300 3 223 1.1E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07315 eee66ae61cb9842241add0177ae7953d 246 Pfam PF00005 ABC transporter 18 159 1.9E-26 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS07315 eee66ae61cb9842241add0177ae7953d 246 SUPERFAMILY SSF52540 3 221 4.82E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07315 eee66ae61cb9842241add0177ae7953d 246 PANTHER PTHR24220 4 233 1.7E-69 T 20-04-2016 AMC99_RS07315 eee66ae61cb9842241add0177ae7953d 246 SMART SM00382 27 208 1.5E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS06010 298ebf9d1f3704bb2e2948b7407e3829 428 PRINTS PR00143 Citrate synthase signature 241 269 1.6E-55 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 AMC99_RS06010 298ebf9d1f3704bb2e2948b7407e3829 428 PRINTS PR00143 Citrate synthase signature 296 316 1.6E-55 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 AMC99_RS06010 298ebf9d1f3704bb2e2948b7407e3829 428 PRINTS PR00143 Citrate synthase signature 219 234 1.6E-55 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 AMC99_RS06010 298ebf9d1f3704bb2e2948b7407e3829 428 PRINTS PR00143 Citrate synthase signature 165 178 1.6E-55 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 AMC99_RS06010 298ebf9d1f3704bb2e2948b7407e3829 428 PRINTS PR00143 Citrate synthase signature 359 375 1.6E-55 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 AMC99_RS06010 298ebf9d1f3704bb2e2948b7407e3829 428 PRINTS PR00143 Citrate synthase signature 379 393 1.6E-55 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 AMC99_RS06010 298ebf9d1f3704bb2e2948b7407e3829 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 20-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 AMC99_RS06010 298ebf9d1f3704bb2e2948b7407e3829 428 PANTHER PTHR11739 30 428 1.2E-199 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 AMC99_RS06010 298ebf9d1f3704bb2e2948b7407e3829 428 PIRSF PIRSF001369 37 428 1.1E-163 T 20-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 AMC99_RS06010 298ebf9d1f3704bb2e2948b7407e3829 428 SUPERFAMILY SSF48256 5 428 4.19E-164 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 AMC99_RS06010 298ebf9d1f3704bb2e2948b7407e3829 428 Gene3D G3DSA:1.10.580.10 52 280 5.9E-97 T 20-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 AMC99_RS06010 298ebf9d1f3704bb2e2948b7407e3829 428 Gene3D G3DSA:1.10.230.10 281 372 7.0E-40 T 20-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain AMC99_RS06010 298ebf9d1f3704bb2e2948b7407e3829 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 411 4.9E-128 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 AMC99_RS06010 298ebf9d1f3704bb2e2948b7407e3829 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 422 9.5E-222 T 20-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 AMC99_RS07250 c18940f00340a2467c2758ef39cce138 411 SUPERFAMILY SSF52402 10 179 4.85E-45 T 20-04-2016 AMC99_RS07250 c18940f00340a2467c2758ef39cce138 411 PANTHER PTHR11587 1 411 1.8E-216 T 20-04-2016 AMC99_RS07250 c18940f00340a2467c2758ef39cce138 411 Hamap MF_00005 Argininosuccinate synthase [argG]. 9 409 51.971 T 20-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS07250 c18940f00340a2467c2758ef39cce138 411 SUPERFAMILY SSF69864 182 408 9.94E-90 T 20-04-2016 AMC99_RS07250 c18940f00340a2467c2758ef39cce138 411 Gene3D G3DSA:3.90.1260.10 185 409 4.6E-97 T 20-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS07250 c18940f00340a2467c2758ef39cce138 411 TIGRFAM TIGR00032 argG: argininosuccinate synthase 11 406 6.1E-140 T 20-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS07250 c18940f00340a2467c2758ef39cce138 411 PANTHER PTHR11587:SF2 1 411 1.8E-216 T 20-04-2016 AMC99_RS07250 c18940f00340a2467c2758ef39cce138 411 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 15 23 - T 20-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS07250 c18940f00340a2467c2758ef39cce138 411 Pfam PF00764 Arginosuccinate synthase 13 403 2.1E-149 T 20-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS07250 c18940f00340a2467c2758ef39cce138 411 Gene3D G3DSA:3.40.50.620 10 179 1.1E-61 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS07250 c18940f00340a2467c2758ef39cce138 411 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 125 136 - T 20-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS02890 de0b556e6ff600b188a1695e2ed94fb5 471 PANTHER PTHR11699:SF197 5 447 7.7E-182 T 20-04-2016 AMC99_RS02890 de0b556e6ff600b188a1695e2ed94fb5 471 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 6 459 1.8E-180 T 20-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 AMC99_RS02890 de0b556e6ff600b188a1695e2ed94fb5 471 PANTHER PTHR11699 5 447 7.7E-182 T 20-04-2016 AMC99_RS02890 de0b556e6ff600b188a1695e2ed94fb5 471 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 229 236 - T 20-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AMC99_RS02890 de0b556e6ff600b188a1695e2ed94fb5 471 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 257 268 - T 20-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AMC99_RS02890 de0b556e6ff600b188a1695e2ed94fb5 471 Gene3D G3DSA:3.40.309.10 238 429 4.7E-39 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMC99_RS02890 de0b556e6ff600b188a1695e2ed94fb5 471 Gene3D G3DSA:3.40.605.10 9 237 3.2E-62 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS02890 de0b556e6ff600b188a1695e2ed94fb5 471 Pfam PF00171 Aldehyde dehydrogenase family 19 446 2.9E-108 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS02890 de0b556e6ff600b188a1695e2ed94fb5 471 SUPERFAMILY SSF53720 9 441 4.58E-110 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Gene3D G3DSA:3.90.650.10 213 354 2.1E-7 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 PANTHER PTHR10099:SF2 11 749 0.0 T 20-04-2016 AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 PANTHER PTHR10099 11 749 0.0 T 20-04-2016 AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 SUPERFAMILY SSF55326 399 570 1.57E-54 T 20-04-2016 AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 SUPERFAMILY SSF56042 572 748 1.74E-32 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Pfam PF02769 AIR synthase related protein, C-terminal domain 576 715 1.0E-14 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Pfam PF02769 AIR synthase related protein, C-terminal domain 202 353 2.1E-33 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 SUPERFAMILY SSF56042 200 427 3.14E-57 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 PIRSF PIRSF001587 3 750 3.1E-286 T 20-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 750 316.874 T 20-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Gene3D G3DSA:3.30.1330.10 50 194 1.4E-47 T 20-04-2016 IPR016188 PurM-like, N-terminal domain AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Gene3D G3DSA:3.30.1330.10 415 565 1.9E-51 T 20-04-2016 IPR016188 PurM-like, N-terminal domain AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 18 747 1.5E-278 T 20-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Pfam PF00586 AIR synthase related protein, N-terminal domain 441 562 2.5E-22 T 20-04-2016 IPR016188 PurM-like, N-terminal domain AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Pfam PF00586 AIR synthase related protein, N-terminal domain 87 188 1.9E-21 T 20-04-2016 IPR016188 PurM-like, N-terminal domain AMC99_RS05100 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 SUPERFAMILY SSF55326 14 196 1.14E-49 T 20-04-2016 AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 Gene3D G3DSA:3.30.1490.20 129 202 1.0E-28 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 Gene3D G3DSA:3.30.470.20 203 463 1.1E-96 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 327 4.3E-76 T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 SUPERFAMILY SSF51246 335 463 2.51E-37 T 20-04-2016 IPR011054 Rudiment single hybrid motif AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 SUPERFAMILY SSF56059 83 352 1.38E-66 T 20-04-2016 AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 SUPERFAMILY SSF51230 609 688 6.41E-18 T 20-04-2016 IPR011053 Single hybrid motif AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 Gene3D G3DSA:2.40.50.100 622 688 1.9E-18 T 20-04-2016 AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 PANTHER PTHR18866 609 688 0.0 T 20-04-2016 AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 PANTHER PTHR18866 1 565 0.0 T 20-04-2016 AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 Pfam PF00364 Biotin-requiring enzyme 624 687 1.7E-14 T 20-04-2016 IPR000089 Biotin/lipoyl attachment AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.4E-44 T 20-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 Pfam PF02785 Biotin carboxylase C-terminal domain 340 460 2.4E-33 T 20-04-2016 IPR005482 Biotin carboxylase, C-terminal AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 SMART SM00878 340 460 2.8E-54 T 20-04-2016 IPR005482 Biotin carboxylase, C-terminal AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 Gene3D G3DSA:3.40.50.20 1 128 1.8E-50 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 SUPERFAMILY SSF52440 1 113 6.47E-48 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS04505 16e109e7e025a594ef34244fe90ef9d4 688 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 644 661 - T 20-04-2016 IPR001882 Biotin-binding site AMC99_RS08760 3e5f748728c19b8067203f5f36dacba4 184 Gene3D G3DSA:3.40.30.10 3 183 1.5E-32 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS08760 3e5f748728c19b8067203f5f36dacba4 184 Pfam PF08534 Redoxin 45 108 8.1E-12 T 20-04-2016 IPR013740 Redoxin GO:0016491 AMC99_RS08760 3e5f748728c19b8067203f5f36dacba4 184 ProSitePatterns PS00194 Thioredoxin family active site. 73 91 - T 20-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 AMC99_RS08760 3e5f748728c19b8067203f5f36dacba4 184 PANTHER PTHR10681:SF107 46 143 3.5E-15 T 20-04-2016 AMC99_RS08760 3e5f748728c19b8067203f5f36dacba4 184 SUPERFAMILY SSF52833 35 181 2.96E-28 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS08760 3e5f748728c19b8067203f5f36dacba4 184 PANTHER PTHR10681 46 143 3.5E-15 T 20-04-2016 AMC99_RS05675 763a413b8a09116245a5125d63393486 774 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 129 708 1.5E-127 T 20-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AMC99_RS05675 763a413b8a09116245a5125d63393486 774 Hamap MF_01895 Ribonuclease R [rnr]. 34 719 46.077 T 20-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AMC99_RS05675 763a413b8a09116245a5125d63393486 774 PANTHER PTHR23355 154 722 5.7E-149 T 20-04-2016 AMC99_RS05675 763a413b8a09116245a5125d63393486 774 SUPERFAMILY SSF50249 228 635 3.48E-127 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS05675 763a413b8a09116245a5125d63393486 774 ProSitePatterns PS01175 Ribonuclease II family signature. 547 571 - T 20-04-2016 IPR022966 Ribonuclease II/R, conserved site AMC99_RS05675 763a413b8a09116245a5125d63393486 774 Gene3D G3DSA:1.10.10.10 13 72 1.8E-4 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS05675 763a413b8a09116245a5125d63393486 774 TIGRFAM TIGR02063 RNase_R: ribonuclease R 14 717 2.4E-181 T 20-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AMC99_RS05675 763a413b8a09116245a5125d63393486 774 Gene3D G3DSA:2.40.50.140 638 715 1.2E-9 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS05675 763a413b8a09116245a5125d63393486 774 SUPERFAMILY SSF50249 636 717 2.47E-12 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS05675 763a413b8a09116245a5125d63393486 774 Pfam PF00773 RNB domain 260 577 1.1E-88 T 20-04-2016 AMC99_RS05675 763a413b8a09116245a5125d63393486 774 SMART SM00955 260 580 3.5E-148 T 20-04-2016 AMC99_RS05675 763a413b8a09116245a5125d63393486 774 Pfam PF00575 S1 RNA binding domain 637 689 1.0E-4 T 20-04-2016 IPR003029 S1 domain GO:0003676 AMC99_RS05675 763a413b8a09116245a5125d63393486 774 PANTHER PTHR23355:SF9 154 722 5.7E-149 T 20-04-2016 AMC99_RS01805 b23f43baf0040feae062e26db44aa4dc 161 PRINTS PR00502 NUDIX hydrolase family signature 72 87 4.1E-8 T 20-04-2016 IPR020476 NUDIX hydrolase AMC99_RS01805 b23f43baf0040feae062e26db44aa4dc 161 PRINTS PR00502 NUDIX hydrolase family signature 58 72 4.1E-8 T 20-04-2016 IPR020476 NUDIX hydrolase AMC99_RS01805 b23f43baf0040feae062e26db44aa4dc 161 Gene3D G3DSA:3.90.79.10 29 153 2.7E-26 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS01805 b23f43baf0040feae062e26db44aa4dc 161 PANTHER PTHR22769 1 138 2.1E-22 T 20-04-2016 AMC99_RS01805 b23f43baf0040feae062e26db44aa4dc 161 Pfam PF00293 NUDIX domain 34 139 9.2E-21 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMC99_RS01805 b23f43baf0040feae062e26db44aa4dc 161 ProSitePatterns PS00893 Nudix box signature. 63 84 - T 20-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMC99_RS01805 b23f43baf0040feae062e26db44aa4dc 161 SUPERFAMILY SSF55811 26 156 2.17E-29 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS13405 41d5668dadde28c5b7a56114b321d86b 439 Gene3D G3DSA:3.90.76.10 4 120 1.2E-16 T 20-04-2016 AMC99_RS13405 41d5668dadde28c5b7a56114b321d86b 439 Gene3D G3DSA:3.40.190.10 121 224 7.3E-6 T 20-04-2016 AMC99_RS13405 41d5668dadde28c5b7a56114b321d86b 439 PANTHER PTHR30290 6 432 1.9E-30 T 20-04-2016 AMC99_RS13405 41d5668dadde28c5b7a56114b321d86b 439 Gene3D G3DSA:3.10.105.10 225 406 1.2E-12 T 20-04-2016 AMC99_RS13405 41d5668dadde28c5b7a56114b321d86b 439 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 18 243 2.8E-20 T 20-04-2016 IPR000914 Solute-binding protein family 5 domain AMC99_RS13405 41d5668dadde28c5b7a56114b321d86b 439 SUPERFAMILY SSF53850 4 431 1.19E-46 T 20-04-2016 AMC99_RS03090 4a7a72d2b60e99416cc564292efccb77 376 PANTHER PTHR10799:SF750 74 347 8.7E-21 T 20-04-2016 AMC99_RS03090 4a7a72d2b60e99416cc564292efccb77 376 SMART SM00267 179 350 1.4E-43 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS03090 4a7a72d2b60e99416cc564292efccb77 376 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 346 3.0E-39 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS03090 4a7a72d2b60e99416cc564292efccb77 376 SUPERFAMILY SSF55073 195 348 2.51E-43 T 20-04-2016 IPR029787 Nucleotide cyclase AMC99_RS03090 4a7a72d2b60e99416cc564292efccb77 376 PANTHER PTHR10799 74 347 8.7E-21 T 20-04-2016 AMC99_RS03090 4a7a72d2b60e99416cc564292efccb77 376 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 350 1.8E-42 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS03090 4a7a72d2b60e99416cc564292efccb77 376 Gene3D G3DSA:3.30.70.270 192 350 9.8E-46 T 20-04-2016 AMC99_RS07520 70dda7ee7efc40bbe758677df9f7738b 125 PANTHER PTHR13501 14 121 7.4E-40 T 20-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 AMC99_RS07520 70dda7ee7efc40bbe758677df9f7738b 125 Pfam PF00237 Ribosomal protein L22p/L17e 21 119 2.2E-26 T 20-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07520 70dda7ee7efc40bbe758677df9f7738b 125 SUPERFAMILY SSF54843 10 124 3.4E-36 T 20-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07520 70dda7ee7efc40bbe758677df9f7738b 125 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 19 119 6.7E-29 T 20-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 AMC99_RS07520 70dda7ee7efc40bbe758677df9f7738b 125 Gene3D G3DSA:3.90.470.10 14 124 3.4E-36 T 20-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07520 70dda7ee7efc40bbe758677df9f7738b 125 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 22.786 T 20-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 AMC99_RS05375 12aeb8f4e26d852ac04b3f873e7e0712 228 Pfam PF01386 Ribosomal L25p family 8 94 6.5E-26 T 20-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMC99_RS05375 12aeb8f4e26d852ac04b3f873e7e0712 228 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 186 29.834 T 20-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMC99_RS05375 12aeb8f4e26d852ac04b3f873e7e0712 228 PANTHER PTHR33284 4 213 6.9E-63 T 20-04-2016 AMC99_RS05375 12aeb8f4e26d852ac04b3f873e7e0712 228 SUPERFAMILY SSF50715 5 194 1.92E-58 T 20-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 AMC99_RS05375 12aeb8f4e26d852ac04b3f873e7e0712 228 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 185 1.2E-43 T 20-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMC99_RS05375 12aeb8f4e26d852ac04b3f873e7e0712 228 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 187 4.2E-27 T 20-04-2016 IPR020057 Ribosomal protein L25, beta domain AMC99_RS05375 12aeb8f4e26d852ac04b3f873e7e0712 228 Gene3D G3DSA:2.40.240.10 6 96 2.8E-32 T 20-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 AMC99_RS05375 12aeb8f4e26d852ac04b3f873e7e0712 228 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 9 97 3.0E-39 T 20-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMC99_RS05375 12aeb8f4e26d852ac04b3f873e7e0712 228 Gene3D G3DSA:2.170.120.20 100 194 2.4E-28 T 20-04-2016 IPR020057 Ribosomal protein L25, beta domain AMC99_RS11905 448bb8e30c5b30159d70025175f24533 227 PANTHER PTHR10173:SF29 1 196 9.7E-71 T 20-04-2016 AMC99_RS11905 448bb8e30c5b30159d70025175f24533 227 SUPERFAMILY SSF55068 39 208 2.75E-61 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMC99_RS11905 448bb8e30c5b30159d70025175f24533 227 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 44 204 33.19 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMC99_RS11905 448bb8e30c5b30159d70025175f24533 227 PANTHER PTHR10173 1 196 9.7E-71 T 20-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 AMC99_RS11905 448bb8e30c5b30159d70025175f24533 227 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 196 7.7E-51 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMC99_RS11905 448bb8e30c5b30159d70025175f24533 227 Pfam PF01625 Peptide methionine sulfoxide reductase 46 198 3.8E-52 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMC99_RS11905 448bb8e30c5b30159d70025175f24533 227 Gene3D G3DSA:3.30.1060.10 24 197 3.1E-61 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMC99_RS00030 cd19d2c3de32241695096974226da541 352 SUPERFAMILY SSF51695 24 334 5.49E-68 T 20-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AMC99_RS00030 cd19d2c3de32241695096974226da541 352 PANTHER PTHR23344 19 333 7.3E-103 T 20-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 AMC99_RS00030 cd19d2c3de32241695096974226da541 352 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 30 335 1.7E-48 T 20-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMC99_RS00030 cd19d2c3de32241695096974226da541 352 Gene3D G3DSA:3.20.20.190 24 335 1.9E-81 T 20-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AMC99_RS00030 cd19d2c3de32241695096974226da541 352 PANTHER PTHR23344:SF7 19 333 7.3E-103 T 20-04-2016 AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 29 487 27.822 T 20-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 PANTHER PTHR30050:SF2 150 488 1.4E-152 T 20-04-2016 AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 SMART SM00760 396 465 1.6E-36 T 20-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 PANTHER PTHR30050:SF2 27 130 1.4E-152 T 20-04-2016 AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 Pfam PF00308 Bacterial dnaA protein 152 370 7.7E-68 T 20-04-2016 IPR013317 Chromosomal replication initiator protein DnaA AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 Gene3D G3DSA:3.40.50.300 150 315 7.6E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 SUPERFAMILY SSF48295 385 487 2.88E-35 T 20-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 PANTHER PTHR30050 27 130 1.4E-152 T 20-04-2016 AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 Gene3D G3DSA:1.10.8.60 318 387 5.0E-21 T 20-04-2016 AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 SUPERFAMILY SSF52540 152 364 4.87E-32 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 397 464 1.2E-28 T 20-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 Gene3D G3DSA:1.10.1750.10 388 487 3.7E-38 T 20-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 32 486 9.3E-145 T 20-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 PANTHER PTHR30050 150 488 1.4E-152 T 20-04-2016 AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 217 231 5.3E-38 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 249 263 5.3E-38 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 185 205 5.3E-38 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 446 465 5.3E-38 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 283 310 5.3E-38 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 Pfam PF11638 DnaA N-terminal domain 32 93 8.3E-14 T 20-04-2016 IPR024633 DnaA N-terminal domain AMC99_RS01165 5026661b3582c4e98fcf7396eecdccc6 488 ProSitePatterns PS01008 DnaA protein signature. 446 465 - T 20-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 231 2.0E-34 T 20-04-2016 AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 PANTHER PTHR24322 6 125 6.7E-32 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 PANTHER PTHR24322 142 174 6.7E-32 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 SUPERFAMILY SSF51735 4 234 9.02E-51 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 1.4E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 129 1.4E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 64 75 1.4E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 6.1E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 6.1E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 6.1E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.1E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 64 75 6.1E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 6.1E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 PANTHER PTHR24322:SF418 6 125 6.7E-32 T 20-04-2016 AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 PANTHER PTHR24322:SF418 142 174 6.7E-32 T 20-04-2016 AMC99_RS06610 8d2599a8df7cafb186304d6d78b054e3 236 Gene3D G3DSA:3.40.50.720 4 232 3.9E-53 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS03515 1fbb4f532e81375a96c1b5d8d13b83e4 298 Gene3D G3DSA:3.40.190.10 95 178 6.4E-16 T 20-04-2016 AMC99_RS03515 1fbb4f532e81375a96c1b5d8d13b83e4 298 Gene3D G3DSA:1.10.10.10 7 89 6.2E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS03515 1fbb4f532e81375a96c1b5d8d13b83e4 298 PANTHER PTHR30346:SF15 7 293 1.7E-84 T 20-04-2016 AMC99_RS03515 1fbb4f532e81375a96c1b5d8d13b83e4 298 SUPERFAMILY SSF46785 5 116 1.93E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS03515 1fbb4f532e81375a96c1b5d8d13b83e4 298 Pfam PF03466 LysR substrate binding domain 93 297 8.6E-41 T 20-04-2016 IPR005119 LysR, substrate-binding AMC99_RS03515 1fbb4f532e81375a96c1b5d8d13b83e4 298 PANTHER PTHR30346 7 293 1.7E-84 T 20-04-2016 AMC99_RS03515 1fbb4f532e81375a96c1b5d8d13b83e4 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.5E-18 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_RS03515 1fbb4f532e81375a96c1b5d8d13b83e4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.8E-5 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_RS03515 1fbb4f532e81375a96c1b5d8d13b83e4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.8E-5 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_RS03515 1fbb4f532e81375a96c1b5d8d13b83e4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.8E-5 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_RS03515 1fbb4f532e81375a96c1b5d8d13b83e4 298 SUPERFAMILY SSF53850 93 297 4.78E-35 T 20-04-2016 AMC99_RS03515 1fbb4f532e81375a96c1b5d8d13b83e4 298 Gene3D G3DSA:3.40.190.10 179 273 3.4E-22 T 20-04-2016 AMC99_RS06815 e2ac09051cb25fb20beb293a4cb2844d 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS06815 e2ac09051cb25fb20beb293a4cb2844d 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 251 3.1E-66 T 20-04-2016 AMC99_RS06815 e2ac09051cb25fb20beb293a4cb2844d 256 Gene3D G3DSA:3.40.50.720 6 253 2.8E-82 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06815 e2ac09051cb25fb20beb293a4cb2844d 256 PANTHER PTHR24322 18 144 1.2E-46 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06815 e2ac09051cb25fb20beb293a4cb2844d 256 PANTHER PTHR24322 160 192 1.2E-46 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06815 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.9E-37 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06815 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.9E-37 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06815 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.9E-37 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06815 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.9E-37 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06815 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.9E-37 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06815 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.9E-37 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06815 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.1E-11 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06815 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 1.1E-11 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06815 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 1.1E-11 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06815 e2ac09051cb25fb20beb293a4cb2844d 256 SUPERFAMILY SSF51735 13 253 1.93E-77 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12610 016d89961767d9f199a7082b31febdd0 137 PANTHER PTHR35024:SF2 1 119 5.1E-21 T 20-04-2016 AMC99_RS12610 016d89961767d9f199a7082b31febdd0 137 PANTHER PTHR35024 1 119 5.1E-21 T 20-04-2016 AMC99_RS12610 016d89961767d9f199a7082b31febdd0 137 Pfam PF04519 Polymer-forming cytoskeletal 11 104 4.3E-24 T 20-04-2016 IPR007607 Protein of unknown function DUF583 AMC99_RS04130 4f314fbe6e7e8d2a9dc2f656f27152c0 206 PANTHER PTHR34478 1 200 1.2E-46 T 20-04-2016 AMC99_RS04130 4f314fbe6e7e8d2a9dc2f656f27152c0 206 PANTHER PTHR34478:SF2 1 200 1.2E-46 T 20-04-2016 AMC99_RS04130 4f314fbe6e7e8d2a9dc2f656f27152c0 206 Gene3D G3DSA:1.20.1440.20 17 188 1.3E-47 T 20-04-2016 IPR023353 LemA-like domain AMC99_RS04130 4f314fbe6e7e8d2a9dc2f656f27152c0 206 Pfam PF04011 LemA family 11 195 1.9E-49 T 20-04-2016 IPR007156 LemA AMC99_RS04130 4f314fbe6e7e8d2a9dc2f656f27152c0 206 SUPERFAMILY SSF140478 30 183 4.05E-41 T 20-04-2016 IPR023353 LemA-like domain AMC99_RS00120 3a2e125ffcac20e7458d5134fd0e3cd0 407 PANTHER PTHR30629:SF4 1 394 3.5E-107 T 20-04-2016 AMC99_RS00120 3a2e125ffcac20e7458d5134fd0e3cd0 407 Gene3D G3DSA:1.10.443.10 208 374 1.4E-26 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_RS00120 3a2e125ffcac20e7458d5134fd0e3cd0 407 PANTHER PTHR30629 1 394 3.5E-107 T 20-04-2016 AMC99_RS00120 3a2e125ffcac20e7458d5134fd0e3cd0 407 Pfam PF00589 Phage integrase family 209 371 2.9E-22 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_RS00120 3a2e125ffcac20e7458d5134fd0e3cd0 407 Pfam PF13356 Domain of unknown function (DUF4102) 3 87 8.6E-23 T 20-04-2016 IPR025166 Domain of unknown function DUF4102 AMC99_RS00120 3a2e125ffcac20e7458d5134fd0e3cd0 407 Gene3D G3DSA:1.10.150.130 98 199 4.8E-18 T 20-04-2016 IPR023109 Integrase/recombinase, N-terminal AMC99_RS00120 3a2e125ffcac20e7458d5134fd0e3cd0 407 SUPERFAMILY SSF56349 99 382 1.53E-56 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMC99_RS02545 f6bfb8ade6df9dd18f076592f87d0e08 265 Pfam PF12697 Alpha/beta hydrolase family 67 238 1.8E-7 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS02545 f6bfb8ade6df9dd18f076592f87d0e08 265 Gene3D G3DSA:3.40.50.1820 43 256 1.3E-25 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS02545 f6bfb8ade6df9dd18f076592f87d0e08 265 SUPERFAMILY SSF53474 46 228 3.88E-18 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS05065 043b6c9d1febb47f590a8c145509e5db 339 PANTHER PTHR21371 1 338 6.6E-190 T 20-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS05065 043b6c9d1febb47f590a8c145509e5db 339 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 3.5E-66 T 20-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS05065 043b6c9d1febb47f590a8c145509e5db 339 SUPERFAMILY SSF51735 1 183 2.47E-74 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS05065 043b6c9d1febb47f590a8c145509e5db 339 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 329 45.068 T 20-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS05065 043b6c9d1febb47f590a8c145509e5db 339 Gene3D G3DSA:1.10.1040.10 29 326 7.8E-115 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMC99_RS05065 043b6c9d1febb47f590a8c145509e5db 339 SUPERFAMILY SSF48179 184 333 4.25E-71 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMC99_RS05065 043b6c9d1febb47f590a8c145509e5db 339 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 327 9.6E-130 T 20-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS05065 043b6c9d1febb47f590a8c145509e5db 339 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 178 2.2E-73 T 20-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS06475 525d63afc793b12126d07c6fc47dfd58 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 7.4E-15 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06475 525d63afc793b12126d07c6fc47dfd58 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 7.4E-15 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06475 525d63afc793b12126d07c6fc47dfd58 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 7.4E-15 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06475 525d63afc793b12126d07c6fc47dfd58 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 7.4E-15 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06475 525d63afc793b12126d07c6fc47dfd58 238 SUPERFAMILY SSF51735 4 237 2.76E-52 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06475 525d63afc793b12126d07c6fc47dfd58 238 PANTHER PTHR24322 159 191 1.7E-30 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06475 525d63afc793b12126d07c6fc47dfd58 238 PANTHER PTHR24322 14 143 1.7E-30 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06475 525d63afc793b12126d07c6fc47dfd58 238 Gene3D G3DSA:3.40.50.720 2 237 2.3E-53 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06475 525d63afc793b12126d07c6fc47dfd58 238 Pfam PF00106 short chain dehydrogenase 11 203 4.0E-39 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS01765 134078921fd927301aca01d35c894500 230 SUPERFAMILY SSF56925 51 230 1.15E-20 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMC99_RS01765 134078921fd927301aca01d35c894500 230 PANTHER PTHR36920 1 230 9.7E-32 T 20-04-2016 AMC99_RS01765 134078921fd927301aca01d35c894500 230 Gene3D G3DSA:2.40.160.20 25 230 1.1E-43 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMC99_RS01765 134078921fd927301aca01d35c894500 230 Pfam PF03922 OmpW family 25 230 5.3E-49 T 20-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 AMC99_RS01765 134078921fd927301aca01d35c894500 230 PANTHER PTHR36920:SF1 1 230 9.7E-32 T 20-04-2016 AMC99_RS01655 0c689d44defafe3b3c37898a74ec19b5 453 Gene3D G3DSA:3.90.1150.10 327 450 2.1E-4 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS01655 0c689d44defafe3b3c37898a74ec19b5 453 PANTHER PTHR11773 1 451 4.8E-183 T 20-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 AMC99_RS01655 0c689d44defafe3b3c37898a74ec19b5 453 Pfam PF02347 Glycine cleavage system P-protein 1 445 5.9E-120 T 20-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 AMC99_RS01655 0c689d44defafe3b3c37898a74ec19b5 453 Gene3D G3DSA:3.40.640.10 66 265 4.3E-21 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS01655 0c689d44defafe3b3c37898a74ec19b5 453 SUPERFAMILY SSF53383 1 452 6.21E-111 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS01655 0c689d44defafe3b3c37898a74ec19b5 453 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 451 44.724 T 20-04-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 AMC99_RS01655 0c689d44defafe3b3c37898a74ec19b5 453 PANTHER PTHR11773:SF2 1 451 4.8E-183 T 20-04-2016 AMC99_RS01655 0c689d44defafe3b3c37898a74ec19b5 453 PIRSF PIRSF006815 1 452 8.7E-165 T 20-04-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 AMC99_RS11080 f7ce6e9c901c0497779c80e6cacdab68 720 SUPERFAMILY SSF56935 281 718 1.83E-84 T 20-04-2016 AMC99_RS11080 f7ce6e9c901c0497779c80e6cacdab68 720 SUPERFAMILY SSF56935 69 251 1.83E-84 T 20-04-2016 AMC99_RS11080 f7ce6e9c901c0497779c80e6cacdab68 720 Gene3D G3DSA:2.170.130.10 69 184 3.2E-27 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS11080 f7ce6e9c901c0497779c80e6cacdab68 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 80 183 1.7E-20 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS11080 f7ce6e9c901c0497779c80e6cacdab68 720 PANTHER PTHR30069 316 609 2.6E-31 T 20-04-2016 AMC99_RS11080 f7ce6e9c901c0497779c80e6cacdab68 720 PANTHER PTHR30069 86 296 2.6E-31 T 20-04-2016 AMC99_RS11080 f7ce6e9c901c0497779c80e6cacdab68 720 Gene3D G3DSA:2.40.170.20 185 719 1.5E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS11080 f7ce6e9c901c0497779c80e6cacdab68 720 Pfam PF00593 TonB dependent receptor 473 718 1.4E-18 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS11080 f7ce6e9c901c0497779c80e6cacdab68 720 PANTHER PTHR30069:SF13 316 609 2.6E-31 T 20-04-2016 AMC99_RS11080 f7ce6e9c901c0497779c80e6cacdab68 720 PANTHER PTHR30069:SF13 86 296 2.6E-31 T 20-04-2016 AMC99_RS00925 cea296eaca8824833d420918e0603ed0 360 PANTHER PTHR24023:SF591 13 356 3.6E-99 T 20-04-2016 AMC99_RS00925 cea296eaca8824833d420918e0603ed0 360 PANTHER PTHR24023 13 356 3.6E-99 T 20-04-2016 AMC99_RS00925 cea296eaca8824833d420918e0603ed0 360 Gene3D G3DSA:3.40.50.10540 4 205 1.9E-88 T 20-04-2016 IPR023606 CoA-transferase family III domain AMC99_RS00925 cea296eaca8824833d420918e0603ed0 360 Gene3D G3DSA:3.40.50.10540 293 346 1.9E-88 T 20-04-2016 IPR023606 CoA-transferase family III domain AMC99_RS00925 cea296eaca8824833d420918e0603ed0 360 SUPERFAMILY SSF89796 6 345 3.79E-105 T 20-04-2016 IPR023606 CoA-transferase family III domain AMC99_RS00925 cea296eaca8824833d420918e0603ed0 360 Gene3D G3DSA:3.30.1540.10 222 292 2.2E-9 T 20-04-2016 AMC99_RS00925 cea296eaca8824833d420918e0603ed0 360 Pfam PF02515 CoA-transferase family III 8 345 1.7E-78 T 20-04-2016 IPR003673 CoA-transferase family III GO:0003824 AMC99_RS05045 0b99a6a7c82305e7c53de028ea92da13 375 PRINTS PR00412 Epoxide hydrolase signature 126 141 2.2E-16 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS05045 0b99a6a7c82305e7c53de028ea92da13 375 PRINTS PR00412 Epoxide hydrolase signature 185 198 2.2E-16 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS05045 0b99a6a7c82305e7c53de028ea92da13 375 PRINTS PR00412 Epoxide hydrolase signature 316 332 2.2E-16 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS05045 0b99a6a7c82305e7c53de028ea92da13 375 PRINTS PR00412 Epoxide hydrolase signature 348 370 2.2E-16 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS05045 0b99a6a7c82305e7c53de028ea92da13 375 PRINTS PR00412 Epoxide hydrolase signature 100 118 2.2E-16 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS05045 0b99a6a7c82305e7c53de028ea92da13 375 PRINTS PR00412 Epoxide hydrolase signature 171 184 2.2E-16 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS05045 0b99a6a7c82305e7c53de028ea92da13 375 PANTHER PTHR21661:SF35 3 374 9.2E-122 T 20-04-2016 AMC99_RS05045 0b99a6a7c82305e7c53de028ea92da13 375 PIRSF PIRSF001112 1 375 2.1E-127 T 20-04-2016 IPR016292 Epoxide hydrolase GO:0033961 KEGG: 00980+3.3.2.9 AMC99_RS05045 0b99a6a7c82305e7c53de028ea92da13 375 Gene3D G3DSA:3.40.50.1820 2 374 2.4E-139 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS05045 0b99a6a7c82305e7c53de028ea92da13 375 Pfam PF06441 Epoxide hydrolase N terminus 4 109 2.6E-34 T 20-04-2016 IPR010497 Epoxide hydrolase, N-terminal KEGG: 00980+3.3.2.9 AMC99_RS05045 0b99a6a7c82305e7c53de028ea92da13 375 PANTHER PTHR21661 3 374 9.2E-122 T 20-04-2016 AMC99_RS05045 0b99a6a7c82305e7c53de028ea92da13 375 SUPERFAMILY SSF53474 3 373 1.66E-105 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS11405 e977241d68de2dc8c8653885cc195fa0 131 Gene3D G3DSA:3.10.180.10 1 126 1.9E-20 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS11405 e977241d68de2dc8c8653885cc195fa0 131 SUPERFAMILY SSF54593 1 128 2.13E-18 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS11405 e977241d68de2dc8c8653885cc195fa0 131 PANTHER PTHR35006 1 130 3.9E-24 T 20-04-2016 AMC99_RS11405 e977241d68de2dc8c8653885cc195fa0 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 122 2.7E-8 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_RS10750 216ebea52629b4282518ea036d7d23b6 163 PANTHER PTHR37953 29 162 1.2E-28 T 20-04-2016 AMC99_RS10750 216ebea52629b4282518ea036d7d23b6 163 Pfam PF02643 Uncharacterized ACR, COG1430 57 159 5.6E-30 T 20-04-2016 IPR003795 Protein of unknown function DUF192 AMC99_RS10750 216ebea52629b4282518ea036d7d23b6 163 PANTHER PTHR37953:SF1 29 162 1.2E-28 T 20-04-2016 AMC99_RS08050 0242d68692f5be301b956ab81ffe8677 225 PANTHER PTHR23026 1 225 2.1E-37 T 20-04-2016 AMC99_RS08050 0242d68692f5be301b956ab81ffe8677 225 SUPERFAMILY SSF55469 2 220 2.88E-44 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 AMC99_RS08050 0242d68692f5be301b956ab81ffe8677 225 PANTHER PTHR23026:SF90 1 225 2.1E-37 T 20-04-2016 AMC99_RS08050 0242d68692f5be301b956ab81ffe8677 225 Gene3D G3DSA:3.40.109.10 2 81 1.2E-44 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 AMC99_RS08050 0242d68692f5be301b956ab81ffe8677 225 Gene3D G3DSA:3.40.109.10 123 221 1.2E-44 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 AMC99_RS08050 0242d68692f5be301b956ab81ffe8677 225 Pfam PF00881 Nitroreductase family 8 197 6.4E-33 T 20-04-2016 IPR029479 Nitroreductase AMC99_RS03345 b1b5c5ac09f1b8aba491b7746419bfdf 240 PANTHER PTHR21499 7 236 1.4E-112 T 20-04-2016 AMC99_RS03345 b1b5c5ac09f1b8aba491b7746419bfdf 240 Gene3D G3DSA:3.40.1160.10 4 237 6.2E-88 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMC99_RS03345 b1b5c5ac09f1b8aba491b7746419bfdf 240 Pfam PF00696 Amino acid kinase family 7 216 2.7E-33 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMC99_RS03345 b1b5c5ac09f1b8aba491b7746419bfdf 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 2.2E-102 T 20-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AMC99_RS03345 b1b5c5ac09f1b8aba491b7746419bfdf 240 PANTHER PTHR21499:SF20 7 236 1.4E-112 T 20-04-2016 AMC99_RS03345 b1b5c5ac09f1b8aba491b7746419bfdf 240 PIRSF PIRSF005650 1 240 3.8E-97 T 20-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AMC99_RS03345 b1b5c5ac09f1b8aba491b7746419bfdf 240 SUPERFAMILY SSF53633 5 236 7.2E-73 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMC99_RS03345 b1b5c5ac09f1b8aba491b7746419bfdf 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 44.743 T 20-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AMC99_RS12835 2d0c46bde36e32598d271e4fe0987c4f 99 Pfam PF06627 Protein of unknown function (DUF1153) 7 90 1.3E-40 T 20-04-2016 IPR009534 Protein of unknown function DUF1153 AMC99_RS12835 2d0c46bde36e32598d271e4fe0987c4f 99 Gene3D G3DSA:1.10.10.10 11 91 2.6E-35 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS12835 2d0c46bde36e32598d271e4fe0987c4f 99 SUPERFAMILY SSF48295 7 90 6.28E-19 T 20-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 AMC99_RS07840 aa74198639f4c0f3ef35174c630e476a 204 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 195 1.1E-38 T 20-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 AMC99_RS07840 aa74198639f4c0f3ef35174c630e476a 204 PANTHER PTHR11735 1 139 4.2E-23 T 20-04-2016 AMC99_RS07840 aa74198639f4c0f3ef35174c630e476a 204 PANTHER PTHR11735:SF11 1 139 4.2E-23 T 20-04-2016 AMC99_RS07840 aa74198639f4c0f3ef35174c630e476a 204 SUPERFAMILY SSF53067 1 97 4.08E-21 T 20-04-2016 AMC99_RS07840 aa74198639f4c0f3ef35174c630e476a 204 Pfam PF00814 Glycoprotease family 32 140 9.0E-15 T 20-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMC99_RS07840 aa74198639f4c0f3ef35174c630e476a 204 Gene3D G3DSA:3.30.420.40 1 123 1.1E-28 T 20-04-2016 AMC99_RS01345 8b60e1f47b38c58426e65ded9d560724 460 Gene3D G3DSA:2.40.440.10 316 362 1.1E-10 T 20-04-2016 AMC99_RS01345 8b60e1f47b38c58426e65ded9d560724 460 Gene3D G3DSA:2.40.440.10 219 267 1.1E-10 T 20-04-2016 AMC99_RS01345 8b60e1f47b38c58426e65ded9d560724 460 Pfam PF03734 L,D-transpeptidase catalytic domain 222 371 2.8E-22 T 20-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMC99_RS01345 8b60e1f47b38c58426e65ded9d560724 460 PANTHER PTHR41533:SF1 204 456 7.0E-51 T 20-04-2016 AMC99_RS01345 8b60e1f47b38c58426e65ded9d560724 460 PANTHER PTHR41533 204 456 7.0E-51 T 20-04-2016 AMC99_RS01345 8b60e1f47b38c58426e65ded9d560724 460 SUPERFAMILY SSF141523 314 361 8.76E-17 T 20-04-2016 AMC99_RS01345 8b60e1f47b38c58426e65ded9d560724 460 SUPERFAMILY SSF141523 219 276 8.76E-17 T 20-04-2016 AMC99_RS08720 422b906b7e417db28d07182285beadc1 198 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 20-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AMC99_RS08720 422b906b7e417db28d07182285beadc1 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 90.99 T 20-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMC99_RS08720 422b906b7e417db28d07182285beadc1 198 PANTHER PTHR30446:SF0 1 198 6.2E-88 T 20-04-2016 AMC99_RS08720 422b906b7e417db28d07182285beadc1 198 Pfam PF13662 Toprim domain 80 170 7.1E-24 T 20-04-2016 IPR006171 Toprim domain AMC99_RS08720 422b906b7e417db28d07182285beadc1 198 PANTHER PTHR30446 1 198 6.2E-88 T 20-04-2016 AMC99_RS08720 422b906b7e417db28d07182285beadc1 198 TIGRFAM TIGR00615 recR: recombination protein RecR 3 195 5.2E-62 T 20-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMC99_RS08720 422b906b7e417db28d07182285beadc1 198 SMART SM00493 79 164 1.5E-7 T 20-04-2016 IPR006171 Toprim domain AMC99_RS08720 422b906b7e417db28d07182285beadc1 198 SUPERFAMILY SSF111304 3 197 1.7E-67 T 20-04-2016 IPR023627 Recombination protein RecR AMC99_RS08720 422b906b7e417db28d07182285beadc1 198 Pfam PF02132 RecR protein 41 77 2.1E-11 T 20-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger AMC99_RS07465 44ad7165fe156c0387ffd30de9982ca0 114 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 8 114 6.8E-38 T 20-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07465 44ad7165fe156c0387ffd30de9982ca0 114 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 114 3.0E-39 T 20-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07465 44ad7165fe156c0387ffd30de9982ca0 114 PANTHER PTHR12899 8 114 3.0E-33 T 20-04-2016 AMC99_RS07465 44ad7165fe156c0387ffd30de9982ca0 114 Gene3D G3DSA:3.30.420.100 24 114 5.1E-35 T 20-04-2016 AMC99_RS07465 44ad7165fe156c0387ffd30de9982ca0 114 SUPERFAMILY SSF53137 9 112 6.11E-44 T 20-04-2016 AMC99_RS07465 44ad7165fe156c0387ffd30de9982ca0 114 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 114 27.504 T 20-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03870 4c5d9c873ae7a0e5652fca9b6762e2ff 481 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 438 9.1E-164 T 20-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 AMC99_RS03870 4c5d9c873ae7a0e5652fca9b6762e2ff 481 PANTHER PTHR30365 1 456 4.8E-246 T 20-04-2016 AMC99_RS03870 4c5d9c873ae7a0e5652fca9b6762e2ff 481 PANTHER PTHR30365:SF8 1 456 4.8E-246 T 20-04-2016 AMC99_RS03870 4c5d9c873ae7a0e5652fca9b6762e2ff 481 PIRSF PIRSF006446 2 460 2.2E-201 T 20-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 AMC99_RS07185 2748b213196cebdea0c75b9e0d7035f3 159 SUPERFAMILY SSF46557 7 79 4.84E-22 T 20-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMC99_RS07185 2748b213196cebdea0c75b9e0d7035f3 159 Gene3D G3DSA:3.10.50.30 81 158 2.7E-23 T 20-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMC99_RS07185 2748b213196cebdea0c75b9e0d7035f3 159 PIRSF PIRSF006092 2 159 8.9E-38 T 20-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AMC99_RS07185 2748b213196cebdea0c75b9e0d7035f3 159 Pfam PF03449 Transcription elongation factor, N-terminal 7 76 1.0E-18 T 20-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMC99_RS07185 2748b213196cebdea0c75b9e0d7035f3 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 86 158 7.6E-21 T 20-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMC99_RS07185 2748b213196cebdea0c75b9e0d7035f3 159 PANTHER PTHR30437 8 159 2.6E-45 T 20-04-2016 AMC99_RS07185 2748b213196cebdea0c75b9e0d7035f3 159 Hamap MF_00930 Transcription elongation factor GreB [greB]. 3 159 47.007 T 20-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AMC99_RS07185 2748b213196cebdea0c75b9e0d7035f3 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 157 24.859 T 20-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AMC99_RS07185 2748b213196cebdea0c75b9e0d7035f3 159 SUPERFAMILY SSF54534 83 158 1.57E-18 T 20-04-2016 AMC99_RS07185 2748b213196cebdea0c75b9e0d7035f3 159 Gene3D G3DSA:1.10.287.180 7 77 2.3E-17 T 20-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMC99_RS07185 2748b213196cebdea0c75b9e0d7035f3 159 PANTHER PTHR30437:SF6 8 159 2.6E-45 T 20-04-2016 AMC99_RS03175 0fcd2186737ca65dd26c5ee51bfff018 532 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 46 516 1.8E-133 T 20-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMC99_RS03175 0fcd2186737ca65dd26c5ee51bfff018 532 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 281 511 5.0E-74 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMC99_RS03175 0fcd2186737ca65dd26c5ee51bfff018 532 SUPERFAMILY SSF82866 328 525 5.1E-43 T 20-04-2016 AMC99_RS03175 0fcd2186737ca65dd26c5ee51bfff018 532 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 531 41.283 T 20-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMC99_RS03175 0fcd2186737ca65dd26c5ee51bfff018 532 PANTHER PTHR30081 154 212 1.1E-125 T 20-04-2016 AMC99_RS03175 0fcd2186737ca65dd26c5ee51bfff018 532 PANTHER PTHR30081 248 532 1.1E-125 T 20-04-2016 AMC99_RS03175 0fcd2186737ca65dd26c5ee51bfff018 532 PANTHER PTHR30081 34 96 1.1E-125 T 20-04-2016 AMC99_RS03175 0fcd2186737ca65dd26c5ee51bfff018 532 Pfam PF02355 Protein export membrane protein 350 513 4.5E-19 T 20-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMC99_RS03175 0fcd2186737ca65dd26c5ee51bfff018 532 Gene3D G3DSA:1.20.1640.10 333 527 6.0E-30 T 20-04-2016 AMC99_RS03175 0fcd2186737ca65dd26c5ee51bfff018 532 PANTHER PTHR30081:SF1 154 212 1.1E-125 T 20-04-2016 AMC99_RS03175 0fcd2186737ca65dd26c5ee51bfff018 532 PANTHER PTHR30081:SF1 248 532 1.1E-125 T 20-04-2016 AMC99_RS03175 0fcd2186737ca65dd26c5ee51bfff018 532 PANTHER PTHR30081:SF1 34 96 1.1E-125 T 20-04-2016 AMC99_RS03175 0fcd2186737ca65dd26c5ee51bfff018 532 Pfam PF07549 SecD/SecF GG Motif 44 60 1.5E-4 T 20-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMC99_RS04275 31fdd1f316aab4b668af5fab6819ec82 304 SUPERFAMILY SSF52402 1 208 2.23E-69 T 20-04-2016 AMC99_RS04275 31fdd1f316aab4b668af5fab6819ec82 304 Gene3D G3DSA:3.40.50.620 245 254 2.2E-57 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS04275 31fdd1f316aab4b668af5fab6819ec82 304 Gene3D G3DSA:3.40.50.620 5 208 2.2E-57 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS04275 31fdd1f316aab4b668af5fab6819ec82 304 PIRSF PIRSF002936 1 304 2.3E-142 T 20-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 AMC99_RS04275 31fdd1f316aab4b668af5fab6819ec82 304 PANTHER PTHR23293 246 304 7.3E-86 T 20-04-2016 AMC99_RS04275 31fdd1f316aab4b668af5fab6819ec82 304 PANTHER PTHR23293 176 209 7.3E-86 T 20-04-2016 AMC99_RS04275 31fdd1f316aab4b668af5fab6819ec82 304 PANTHER PTHR23293 1 156 7.3E-86 T 20-04-2016 AMC99_RS04275 31fdd1f316aab4b668af5fab6819ec82 304 PANTHER PTHR23293:SF6 246 304 7.3E-86 T 20-04-2016 AMC99_RS04275 31fdd1f316aab4b668af5fab6819ec82 304 PANTHER PTHR23293:SF6 176 209 7.3E-86 T 20-04-2016 AMC99_RS04275 31fdd1f316aab4b668af5fab6819ec82 304 PANTHER PTHR23293:SF6 1 156 7.3E-86 T 20-04-2016 AMC99_RS04275 31fdd1f316aab4b668af5fab6819ec82 304 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 8 304 1.7E-140 T 20-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 AMC99_RS04275 31fdd1f316aab4b668af5fab6819ec82 304 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 28 258 4.6E-57 T 20-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 AMC99_RS05400 52361359426137e99f3b1167065e869c 303 Gene3D G3DSA:3.30.930.10 8 214 2.3E-103 T 20-04-2016 AMC99_RS05400 52361359426137e99f3b1167065e869c 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 11 292 56.967 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05400 52361359426137e99f3b1167065e869c 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 12 290 1.7E-139 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05400 52361359426137e99f3b1167065e869c 303 SUPERFAMILY SSF55681 12 289 2.29E-129 T 20-04-2016 AMC99_RS05400 52361359426137e99f3b1167065e869c 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 13 289 9.1E-145 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05400 52361359426137e99f3b1167065e869c 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 65 80 1.9E-64 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05400 52361359426137e99f3b1167065e869c 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 117 141 1.9E-64 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05400 52361359426137e99f3b1167065e869c 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 252 268 1.9E-64 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05400 52361359426137e99f3b1167065e869c 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 86 106 1.9E-64 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05400 52361359426137e99f3b1167065e869c 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 143 163 1.9E-64 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05400 52361359426137e99f3b1167065e869c 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 166 181 1.9E-64 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05400 52361359426137e99f3b1167065e869c 303 Gene3D G3DSA:1.20.58.180 216 291 6.8E-28 T 20-04-2016 AMC99_RS05400 52361359426137e99f3b1167065e869c 303 PANTHER PTHR30075 12 280 5.2E-207 T 20-04-2016 AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 SUPERFAMILY SSF46977 461 607 3.53E-46 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 Gene3D G3DSA:3.90.700.10 253 358 1.0E-39 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 Gene3D G3DSA:4.10.80.40 550 607 2.3E-29 T 20-04-2016 AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 12 607 7.4E-277 T 20-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 PANTHER PTHR11632 4 602 0.0 T 20-04-2016 AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 PANTHER PTHR11632:SF51 4 602 0.0 T 20-04-2016 AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 Gene3D G3DSA:1.20.58.100 443 549 2.2E-36 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 Pfam PF02910 Fumarate reductase flavoprotein C-term 470 607 2.6E-43 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 PIRSF PIRSF000171 5 594 2.9E-35 T 20-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 49 58 - T 20-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 SUPERFAMILY SSF51905 5 269 2.76E-69 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 SUPERFAMILY SSF51905 368 437 2.76E-69 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 Pfam PF00890 FAD binding domain 15 415 7.2E-119 T 20-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 SUPERFAMILY SSF56425 246 364 4.93E-41 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 15 607 3.6E-234 T 20-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 Gene3D G3DSA:3.50.50.60 360 431 1.3E-122 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS06595 e4a28adbe7888f56390a6e2d1dc2e0f8 607 Gene3D G3DSA:3.50.50.60 5 252 1.3E-122 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS02690 03c69452ef809d31dd8ecb697510050d 128 Gene3D G3DSA:3.10.129.10 4 123 2.6E-21 T 20-04-2016 IPR029069 HotDog domain AMC99_RS02690 03c69452ef809d31dd8ecb697510050d 128 Pfam PF03061 Thioesterase superfamily 35 111 1.6E-9 T 20-04-2016 IPR006683 Thioesterase domain AMC99_RS02690 03c69452ef809d31dd8ecb697510050d 128 PANTHER PTHR12418:SF18 4 127 7.2E-17 T 20-04-2016 AMC99_RS02690 03c69452ef809d31dd8ecb697510050d 128 PANTHER PTHR12418 4 127 7.2E-17 T 20-04-2016 AMC99_RS02690 03c69452ef809d31dd8ecb697510050d 128 SUPERFAMILY SSF54637 4 120 7.2E-21 T 20-04-2016 IPR029069 HotDog domain AMC99_RS10845 80b82687a2e0b16abbe7873e4c5e9003 182 PANTHER PTHR24351:SF76 1 124 1.2E-12 T 20-04-2016 AMC99_RS10845 80b82687a2e0b16abbe7873e4c5e9003 182 Pfam PF13426 PAS domain 29 115 6.9E-11 T 20-04-2016 IPR000014 PAS domain AMC99_RS10845 80b82687a2e0b16abbe7873e4c5e9003 182 SUPERFAMILY SSF55785 6 120 1.29E-12 T 20-04-2016 IPR000014 PAS domain AMC99_RS10845 80b82687a2e0b16abbe7873e4c5e9003 182 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 117 1.9E-7 T 20-04-2016 IPR000014 PAS domain AMC99_RS10845 80b82687a2e0b16abbe7873e4c5e9003 182 Gene3D G3DSA:3.30.450.20 21 121 9.2E-15 T 20-04-2016 AMC99_RS10845 80b82687a2e0b16abbe7873e4c5e9003 182 PANTHER PTHR24351 1 124 1.2E-12 T 20-04-2016 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 PIRSF PIRSF001109 4 478 1.0E-183 T 20-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 SMART SM00997 239 398 3.2E-105 T 20-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 Gene3D G3DSA:3.40.50.1480 14 240 4.3E-142 T 20-04-2016 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 Gene3D G3DSA:3.40.50.1480 399 478 4.3E-142 T 20-04-2016 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 PANTHER PTHR23420 185 478 0.0 T 20-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 PANTHER PTHR23420 13 154 0.0 T 20-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 SUPERFAMILY SSF52283 191 238 3.34E-113 T 20-04-2016 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 SUPERFAMILY SSF52283 399 478 3.34E-113 T 20-04-2016 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 SUPERFAMILY SSF52283 13 156 3.34E-113 T 20-04-2016 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 16 470 1.2E-176 T 20-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 261 277 - T 20-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 11 470 47.274 T 20-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 15 477 2.8E-140 T 20-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 239 398 6.6E-78 T 20-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 Gene3D G3DSA:3.40.50.720 241 397 1.7E-49 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 SMART SM00996 15 477 0.0 T 20-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMC99_RS04600 a6d1e8a9fb3b55d1998f29037d78e6b2 478 SUPERFAMILY SSF51735 239 398 1.76E-73 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09440 8dec7cb001fdf4535dead12a851caf4a 199 PANTHER PTHR15020 1 190 7.9E-37 T 20-04-2016 AMC99_RS09440 8dec7cb001fdf4535dead12a851caf4a 199 SMART SM00859 2 91 0.0095 T 20-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMC99_RS09440 8dec7cb001fdf4535dead12a851caf4a 199 SUPERFAMILY SSF51735 1 192 1.65E-37 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09440 8dec7cb001fdf4535dead12a851caf4a 199 Gene3D G3DSA:3.40.50.720 1 191 1.9E-43 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09440 8dec7cb001fdf4535dead12a851caf4a 199 Pfam PF13460 NAD(P)H-binding 7 184 8.9E-40 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS07665 3282e184299605cf3c4f8f8e9e1beaca 333 PANTHER PTHR35007:SF1 81 333 1.7E-45 T 20-04-2016 AMC99_RS07665 3282e184299605cf3c4f8f8e9e1beaca 333 Pfam PF00482 Type II secretion system (T2SS), protein F 166 290 8.1E-21 T 20-04-2016 IPR018076 Type II secretion system F domain AMC99_RS07665 3282e184299605cf3c4f8f8e9e1beaca 333 PANTHER PTHR35007 81 333 1.7E-45 T 20-04-2016 AMC99_RS07015 57139022505b1b062c6aedc148017925 436 Pfam PF00206 Lyase 73 288 1.5E-49 T 20-04-2016 IPR022761 Fumarate lyase, N-terminal AMC99_RS07015 57139022505b1b062c6aedc148017925 436 PANTHER PTHR11444:SF2 4 430 9.7E-141 T 20-04-2016 AMC99_RS07015 57139022505b1b062c6aedc148017925 436 Pfam PF10397 Adenylosuccinate lyase C-terminus 354 434 3.2E-27 T 20-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 AMC99_RS07015 57139022505b1b062c6aedc148017925 436 Gene3D G3DSA:1.10.40.30 361 435 6.5E-34 T 20-04-2016 AMC99_RS07015 57139022505b1b062c6aedc148017925 436 PRINTS PR00145 Argininosuccinate lyase family signature 265 281 8.8E-8 T 20-04-2016 AMC99_RS07015 57139022505b1b062c6aedc148017925 436 PRINTS PR00145 Argininosuccinate lyase family signature 91 113 8.8E-8 T 20-04-2016 AMC99_RS07015 57139022505b1b062c6aedc148017925 436 PRINTS PR00145 Argininosuccinate lyase family signature 220 244 8.8E-8 T 20-04-2016 AMC99_RS07015 57139022505b1b062c6aedc148017925 436 PRINTS PR00145 Argininosuccinate lyase family signature 132 152 8.8E-8 T 20-04-2016 AMC99_RS07015 57139022505b1b062c6aedc148017925 436 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 2 435 8.8E-149 T 20-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 AMC99_RS07015 57139022505b1b062c6aedc148017925 436 ProSitePatterns PS00163 Fumarate lyases signature. 265 274 - T 20-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 AMC99_RS07015 57139022505b1b062c6aedc148017925 436 Gene3D G3DSA:1.10.275.10 3 94 2.4E-25 T 20-04-2016 IPR024083 Fumarase/histidase, N-terminal AMC99_RS07015 57139022505b1b062c6aedc148017925 436 Gene3D G3DSA:1.20.200.10 95 360 8.4E-88 T 20-04-2016 AMC99_RS07015 57139022505b1b062c6aedc148017925 436 SUPERFAMILY SSF48557 3 435 9.9E-126 T 20-04-2016 IPR008948 L-Aspartase-like GO:0003824 AMC99_RS07015 57139022505b1b062c6aedc148017925 436 SMART SM00998 353 435 2.1E-37 T 20-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 AMC99_RS07015 57139022505b1b062c6aedc148017925 436 PANTHER PTHR11444 4 430 9.7E-141 T 20-04-2016 IPR000362 Fumarate lyase family AMC99_RS07015 57139022505b1b062c6aedc148017925 436 PRINTS PR00149 Fumarate lyase superfamily signature 137 155 2.3E-24 T 20-04-2016 IPR000362 Fumarate lyase family AMC99_RS07015 57139022505b1b062c6aedc148017925 436 PRINTS PR00149 Fumarate lyase superfamily signature 220 247 2.3E-24 T 20-04-2016 IPR000362 Fumarate lyase family AMC99_RS07015 57139022505b1b062c6aedc148017925 436 PRINTS PR00149 Fumarate lyase superfamily signature 92 110 2.3E-24 T 20-04-2016 IPR000362 Fumarate lyase family AMC99_RS07015 57139022505b1b062c6aedc148017925 436 PRINTS PR00149 Fumarate lyase superfamily signature 265 281 2.3E-24 T 20-04-2016 IPR000362 Fumarate lyase family AMC99_RS07550 862487b6489b0d67bc8eba427c237e24 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 6.9E-43 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07550 862487b6489b0d67bc8eba427c237e24 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.166 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07550 862487b6489b0d67bc8eba427c237e24 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 20-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07550 862487b6489b0d67bc8eba427c237e24 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.5E-34 T 20-04-2016 IPR027486 Ribosomal protein S10 domain AMC99_RS07550 862487b6489b0d67bc8eba427c237e24 103 SMART SM01403 7 101 2.0E-53 T 20-04-2016 IPR027486 Ribosomal protein S10 domain AMC99_RS07550 862487b6489b0d67bc8eba427c237e24 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 4.72E-17 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07550 862487b6489b0d67bc8eba427c237e24 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 4.72E-17 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07550 862487b6489b0d67bc8eba427c237e24 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 4.72E-17 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07550 862487b6489b0d67bc8eba427c237e24 103 Gene3D G3DSA:3.30.70.600 4 102 2.4E-41 T 20-04-2016 IPR027486 Ribosomal protein S10 domain AMC99_RS07550 862487b6489b0d67bc8eba427c237e24 103 PANTHER PTHR11700 1 103 9.0E-50 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07550 862487b6489b0d67bc8eba427c237e24 103 SUPERFAMILY SSF54999 6 102 9.81E-37 T 20-04-2016 IPR027486 Ribosomal protein S10 domain AMC99_RS02510 94f353cd0e5a339f6619016caa2b7e81 618 Gene3D G3DSA:2.30.38.10 412 490 4.9E-16 T 20-04-2016 AMC99_RS02510 94f353cd0e5a339f6619016caa2b7e81 618 PANTHER PTHR24095:SF167 3 617 0.0 T 20-04-2016 AMC99_RS02510 94f353cd0e5a339f6619016caa2b7e81 618 Gene3D G3DSA:3.40.50.980 50 237 1.6E-36 T 20-04-2016 AMC99_RS02510 94f353cd0e5a339f6619016caa2b7e81 618 PANTHER PTHR24095 3 617 0.0 T 20-04-2016 AMC99_RS02510 94f353cd0e5a339f6619016caa2b7e81 618 Pfam PF00501 AMP-binding enzyme 61 496 1.1E-82 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMC99_RS02510 94f353cd0e5a339f6619016caa2b7e81 618 SUPERFAMILY SSF56801 10 613 1.7E-151 T 20-04-2016 AMC99_RS02510 94f353cd0e5a339f6619016caa2b7e81 618 ProSitePatterns PS00455 Putative AMP-binding domain signature. 233 244 - T 20-04-2016 IPR020845 AMP-binding, conserved site AMC99_RS02510 94f353cd0e5a339f6619016caa2b7e81 618 Pfam PF13193 AMP-binding enzyme C-terminal domain 506 583 7.3E-25 T 20-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMC99_RS02510 94f353cd0e5a339f6619016caa2b7e81 618 Gene3D G3DSA:3.40.50.980 238 392 6.9E-24 T 20-04-2016 AMC99_RS02510 94f353cd0e5a339f6619016caa2b7e81 618 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 6 54 4.5E-10 T 20-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 AMC99_RS02510 94f353cd0e5a339f6619016caa2b7e81 618 Gene3D G3DSA:3.30.300.30 491 595 4.9E-24 T 20-04-2016 AMC99_RS02870 9ed80466a88c973be9e2d64bf88690d1 347 Hamap MF_00219 Dihydroorotase [pyrC]. 3 346 47.818 T 20-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS02870 9ed80466a88c973be9e2d64bf88690d1 347 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 20-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS02870 9ed80466a88c973be9e2d64bf88690d1 347 PANTHER PTHR11647:SF59 1 316 3.1E-156 T 20-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS02870 9ed80466a88c973be9e2d64bf88690d1 347 Pfam PF01979 Amidohydrolase family 12 303 8.4E-21 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMC99_RS02870 9ed80466a88c973be9e2d64bf88690d1 347 SUPERFAMILY SSF51556 3 345 3.58E-146 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS02870 9ed80466a88c973be9e2d64bf88690d1 347 PANTHER PTHR11647 1 316 3.1E-156 T 20-04-2016 AMC99_RS02870 9ed80466a88c973be9e2d64bf88690d1 347 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 20-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS02870 9ed80466a88c973be9e2d64bf88690d1 347 Gene3D G3DSA:3.20.20.140 2 345 3.7E-138 T 20-04-2016 AMC99_RS02870 9ed80466a88c973be9e2d64bf88690d1 347 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 345 4.2E-142 T 20-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS02870 9ed80466a88c973be9e2d64bf88690d1 347 PIRSF PIRSF001237 1 347 8.1E-141 T 20-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS12925 36f9d0e3e2c2e14a72187c7093e22b8c 172 Pfam PF00186 Dihydrofolate reductase 6 168 1.5E-50 T 20-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMC99_RS12925 36f9d0e3e2c2e14a72187c7093e22b8c 172 PANTHER PTHR22778:SF16 7 170 4.3E-32 T 20-04-2016 AMC99_RS12925 36f9d0e3e2c2e14a72187c7093e22b8c 172 SUPERFAMILY SSF53597 5 169 3.14E-49 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain AMC99_RS12925 36f9d0e3e2c2e14a72187c7093e22b8c 172 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 16 38 - T 20-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMC99_RS12925 36f9d0e3e2c2e14a72187c7093e22b8c 172 PIRSF PIRSF000194 1 171 2.2E-56 T 20-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMC99_RS12925 36f9d0e3e2c2e14a72187c7093e22b8c 172 PANTHER PTHR22778 7 170 4.3E-32 T 20-04-2016 AMC99_RS12925 36f9d0e3e2c2e14a72187c7093e22b8c 172 Gene3D G3DSA:3.40.430.10 5 169 2.2E-53 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain AMC99_RS12925 36f9d0e3e2c2e14a72187c7093e22b8c 172 PRINTS PR00070 Dihydrofolate reductase signature 16 26 8.9E-15 T 20-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMC99_RS12925 36f9d0e3e2c2e14a72187c7093e22b8c 172 PRINTS PR00070 Dihydrofolate reductase signature 48 59 8.9E-15 T 20-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMC99_RS12925 36f9d0e3e2c2e14a72187c7093e22b8c 172 PRINTS PR00070 Dihydrofolate reductase signature 102 116 8.9E-15 T 20-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMC99_RS12925 36f9d0e3e2c2e14a72187c7093e22b8c 172 PRINTS PR00070 Dihydrofolate reductase signature 30 38 8.9E-15 T 20-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMC99_RS05335 e107202c85da85440823cc3b8f7cdd5b 347 PANTHER PTHR19375 10 332 1.1E-150 T 20-04-2016 AMC99_RS05335 e107202c85da85440823cc3b8f7cdd5b 347 SUPERFAMILY SSF53067 154 334 4.24E-48 T 20-04-2016 AMC99_RS05335 e107202c85da85440823cc3b8f7cdd5b 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 12 337 2.7E-147 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMC99_RS05335 e107202c85da85440823cc3b8f7cdd5b 347 SUPERFAMILY SSF53067 14 150 7.0E-36 T 20-04-2016 AMC99_RS05335 e107202c85da85440823cc3b8f7cdd5b 347 PANTHER PTHR19375:SF117 10 332 1.1E-150 T 20-04-2016 AMC99_RS05335 e107202c85da85440823cc3b8f7cdd5b 347 Gene3D G3DSA:3.90.640.10 191 265 1.9E-28 T 20-04-2016 AMC99_RS05335 e107202c85da85440823cc3b8f7cdd5b 347 Gene3D G3DSA:3.30.420.40 14 164 1.7E-42 T 20-04-2016 AMC99_RS05335 e107202c85da85440823cc3b8f7cdd5b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 306 332 7.4E-59 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMC99_RS05335 e107202c85da85440823cc3b8f7cdd5b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 7.4E-59 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMC99_RS05335 e107202c85da85440823cc3b8f7cdd5b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 7.4E-59 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMC99_RS05335 e107202c85da85440823cc3b8f7cdd5b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 7.4E-59 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMC99_RS05335 e107202c85da85440823cc3b8f7cdd5b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 7.4E-59 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMC99_RS05335 e107202c85da85440823cc3b8f7cdd5b 347 Pfam PF06723 MreB/Mbl protein 13 337 1.4E-138 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMC99_RS05335 e107202c85da85440823cc3b8f7cdd5b 347 Gene3D G3DSA:3.30.420.40 269 323 1.8E-31 T 20-04-2016 AMC99_RS05335 e107202c85da85440823cc3b8f7cdd5b 347 Gene3D G3DSA:3.30.420.40 165 190 1.8E-31 T 20-04-2016 AMC99_RS09045 b4a02e6dfe8aa177b155dfbd32e3648b 655 Gene3D G3DSA:2.170.130.10 49 170 1.4E-29 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS09045 b4a02e6dfe8aa177b155dfbd32e3648b 655 Pfam PF00593 TonB dependent receptor 416 653 1.6E-30 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS09045 b4a02e6dfe8aa177b155dfbd32e3648b 655 PANTHER PTHR32552 49 655 6.8E-43 T 20-04-2016 AMC99_RS09045 b4a02e6dfe8aa177b155dfbd32e3648b 655 Gene3D G3DSA:2.40.170.20 178 655 4.1E-71 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS09045 b4a02e6dfe8aa177b155dfbd32e3648b 655 SUPERFAMILY SSF56935 50 655 8.55E-99 T 20-04-2016 AMC99_RS09045 b4a02e6dfe8aa177b155dfbd32e3648b 655 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 165 1.9E-24 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS13165 e00ee6fcac13868cc6c1b3473d321964 366 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 87 1.1E-17 T 20-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMC99_RS13165 e00ee6fcac13868cc6c1b3473d321964 366 Pfam PF01409 tRNA synthetases class II core domain (F) 92 347 2.7E-97 T 20-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AMC99_RS13165 e00ee6fcac13868cc6c1b3473d321964 366 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 348 44.713 T 20-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AMC99_RS13165 e00ee6fcac13868cc6c1b3473d321964 366 SUPERFAMILY SSF55681 92 349 4.97E-74 T 20-04-2016 AMC99_RS13165 e00ee6fcac13868cc6c1b3473d321964 366 SUPERFAMILY SSF46589 12 98 1.46E-16 T 20-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 AMC99_RS13165 e00ee6fcac13868cc6c1b3473d321964 366 PANTHER PTHR11538 90 346 1.2E-87 T 20-04-2016 AMC99_RS13165 e00ee6fcac13868cc6c1b3473d321964 366 PANTHER PTHR11538 39 52 1.2E-87 T 20-04-2016 AMC99_RS13165 e00ee6fcac13868cc6c1b3473d321964 366 Gene3D G3DSA:3.30.930.10 9 348 5.5E-118 T 20-04-2016 AMC99_RS13165 e00ee6fcac13868cc6c1b3473d321964 366 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 41 347 1.2E-95 T 20-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMC99_RS09175 ef85379622b3d6fbe345568a5de061a9 105 Gene3D G3DSA:3.10.20.30 1 101 1.3E-33 T 20-04-2016 IPR012675 Beta-grasp domain AMC99_RS09175 ef85379622b3d6fbe345568a5de061a9 105 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 89 2.5E-11 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMC99_RS09175 ef85379622b3d6fbe345568a5de061a9 105 PANTHER PTHR23426 3 101 1.7E-21 T 20-04-2016 AMC99_RS09175 ef85379622b3d6fbe345568a5de061a9 105 PANTHER PTHR23426:SF28 3 101 1.7E-21 T 20-04-2016 AMC99_RS09175 ef85379622b3d6fbe345568a5de061a9 105 SUPERFAMILY SSF54292 3 101 1.19E-29 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMC99_RS09175 ef85379622b3d6fbe345568a5de061a9 105 PRINTS PR00355 Adrenodoxin signature 59 73 4.2E-9 T 20-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 AMC99_RS09175 ef85379622b3d6fbe345568a5de061a9 105 PRINTS PR00355 Adrenodoxin signature 40 50 4.2E-9 T 20-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 AMC99_RS09175 ef85379622b3d6fbe345568a5de061a9 105 PRINTS PR00355 Adrenodoxin signature 82 90 4.2E-9 T 20-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 AMC99_RS12120 9b7d04005d06591cc7aea87d0943a615 228 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 208 3.8E-17 T 20-04-2016 AMC99_RS04640 5e3fbb83229cf7d6e445d7d2d6a19315 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 1.0E-21 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04640 5e3fbb83229cf7d6e445d7d2d6a19315 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 1.0E-21 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04640 5e3fbb83229cf7d6e445d7d2d6a19315 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 136 159 1.0E-21 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04640 5e3fbb83229cf7d6e445d7d2d6a19315 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 1.0E-21 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04640 5e3fbb83229cf7d6e445d7d2d6a19315 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 1.0E-21 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04640 5e3fbb83229cf7d6e445d7d2d6a19315 268 Pfam PF00459 Inositol monophosphatase family 17 251 6.2E-38 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04640 5e3fbb83229cf7d6e445d7d2d6a19315 268 SUPERFAMILY SSF56655 13 262 7.59E-53 T 20-04-2016 AMC99_RS04640 5e3fbb83229cf7d6e445d7d2d6a19315 268 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 87 100 - T 20-04-2016 IPR020583 Inositol monophosphatase, metal-binding site AMC99_RS04640 5e3fbb83229cf7d6e445d7d2d6a19315 268 PANTHER PTHR20854 11 262 9.3E-32 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04640 5e3fbb83229cf7d6e445d7d2d6a19315 268 Gene3D G3DSA:3.40.190.80 177 262 1.7E-11 T 20-04-2016 AMC99_RS04640 5e3fbb83229cf7d6e445d7d2d6a19315 268 Gene3D G3DSA:3.30.540.10 9 151 2.2E-34 T 20-04-2016 AMC99_RS02595 0dbce3e06a3dbdcaa4f5ff311ba287c7 700 PANTHER PTHR31998 3 689 0.0 T 20-04-2016 AMC99_RS02595 0dbce3e06a3dbdcaa4f5ff311ba287c7 700 PIRSF PIRSF001265 2 699 6.4E-242 T 20-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AMC99_RS02595 0dbce3e06a3dbdcaa4f5ff311ba287c7 700 PANTHER PTHR31998:SF0 3 689 0.0 T 20-04-2016 AMC99_RS02595 0dbce3e06a3dbdcaa4f5ff311ba287c7 700 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 1 694 25.008 T 20-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AMC99_RS02595 0dbce3e06a3dbdcaa4f5ff311ba287c7 700 Pfam PF03030 Inorganic H+ pyrophosphatase 12 688 7.3E-255 T 20-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AMC99_RS02595 0dbce3e06a3dbdcaa4f5ff311ba287c7 700 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 5 694 8.3E-265 T 20-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AMC99_RS08420 3f9e48b3ce227692b90791ade9552d32 225 PANTHER PTHR10099 4 224 1.4E-109 T 20-04-2016 AMC99_RS08420 3f9e48b3ce227692b90791ade9552d32 225 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 4 206 2.2E-39 T 20-04-2016 AMC99_RS08420 3f9e48b3ce227692b90791ade9552d32 225 SUPERFAMILY SSF52317 3 221 3.7E-75 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS08420 3f9e48b3ce227692b90791ade9552d32 225 PIRSF PIRSF001586 1 225 2.6E-84 T 20-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS08420 3f9e48b3ce227692b90791ade9552d32 225 Gene3D G3DSA:3.40.50.880 4 221 3.5E-37 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS08420 3f9e48b3ce227692b90791ade9552d32 225 SMART SM01211 2 222 1.5E-127 T 20-04-2016 AMC99_RS08420 3f9e48b3ce227692b90791ade9552d32 225 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 3 220 42.249 T 20-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS08420 3f9e48b3ce227692b90791ade9552d32 225 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 4 220 9.1E-87 T 20-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS06255 a32ddef18a06ff140ae669414c9878b4 244 SUPERFAMILY SSF51735 14 243 1.62E-39 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06255 a32ddef18a06ff140ae669414c9878b4 244 Pfam PF00106 short chain dehydrogenase 13 201 1.1E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06255 a32ddef18a06ff140ae669414c9878b4 244 PANTHER PTHR24322 16 137 7.9E-27 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06255 a32ddef18a06ff140ae669414c9878b4 244 PANTHER PTHR24322 157 191 7.9E-27 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06255 a32ddef18a06ff140ae669414c9878b4 244 PANTHER PTHR24322:SF540 16 137 7.9E-27 T 20-04-2016 AMC99_RS06255 a32ddef18a06ff140ae669414c9878b4 244 PANTHER PTHR24322:SF540 157 191 7.9E-27 T 20-04-2016 AMC99_RS06255 a32ddef18a06ff140ae669414c9878b4 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 4.0E-8 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06255 a32ddef18a06ff140ae669414c9878b4 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 4.0E-8 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06255 a32ddef18a06ff140ae669414c9878b4 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.0E-8 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06255 a32ddef18a06ff140ae669414c9878b4 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.0E-8 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06255 a32ddef18a06ff140ae669414c9878b4 244 Gene3D G3DSA:3.40.50.720 13 243 2.7E-44 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS00885 85af16c01062e7ccd012978c85704bb6 384 PANTHER PTHR12526:SF397 60 384 9.9E-22 T 20-04-2016 AMC99_RS00885 85af16c01062e7ccd012978c85704bb6 384 Pfam PF00534 Glycosyl transferases group 1 216 348 1.8E-12 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 AMC99_RS00885 85af16c01062e7ccd012978c85704bb6 384 Gene3D G3DSA:3.40.50.2000 233 351 1.9E-10 T 20-04-2016 AMC99_RS00885 85af16c01062e7ccd012978c85704bb6 384 PANTHER PTHR12526 60 384 9.9E-22 T 20-04-2016 AMC99_RS00885 85af16c01062e7ccd012978c85704bb6 384 SUPERFAMILY SSF53756 66 382 5.83E-36 T 20-04-2016 AMC99_RS00690 927c4f21d456f46a5f51da2fea3c806f 178 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 10 168 2.6E-67 T 20-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 AMC99_RS00690 927c4f21d456f46a5f51da2fea3c806f 178 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 74 87 - T 20-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 AMC99_RS00690 927c4f21d456f46a5f51da2fea3c806f 178 PANTHER PTHR10192:SF18 6 164 8.4E-70 T 20-04-2016 AMC99_RS00690 927c4f21d456f46a5f51da2fea3c806f 178 Pfam PF00994 Probable molybdopterin binding domain 16 153 6.5E-35 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS00690 927c4f21d456f46a5f51da2fea3c806f 178 PANTHER PTHR10192 6 164 8.4E-70 T 20-04-2016 AMC99_RS00690 927c4f21d456f46a5f51da2fea3c806f 178 SMART SM00852 16 160 4.8E-31 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS00690 927c4f21d456f46a5f51da2fea3c806f 178 Gene3D G3DSA:3.40.980.10 8 154 7.8E-49 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS00690 927c4f21d456f46a5f51da2fea3c806f 178 PIRSF PIRSF006443 2 167 7.8E-55 T 20-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 AMC99_RS00690 927c4f21d456f46a5f51da2fea3c806f 178 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 6.8E-34 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS00690 927c4f21d456f46a5f51da2fea3c806f 178 SUPERFAMILY SSF53218 8 164 1.83E-43 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PRINTS PR01806 Virulence factor MviN signature 427 444 1.3E-64 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PRINTS PR01806 Virulence factor MviN signature 133 157 1.3E-64 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PRINTS PR01806 Virulence factor MviN signature 157 178 1.3E-64 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PRINTS PR01806 Virulence factor MviN signature 266 292 1.3E-64 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PRINTS PR01806 Virulence factor MviN signature 364 383 1.3E-64 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PRINTS PR01806 Virulence factor MviN signature 33 52 1.3E-64 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PRINTS PR01806 Virulence factor MviN signature 52 68 1.3E-64 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PIRSF PIRSF002869 1 531 1.5E-125 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 516 1.6E-112 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 Pfam PF03023 MviN-like protein 29 495 1.2E-101 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PANTHER PTHR11206 116 123 1.4E-45 T 20-04-2016 AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PANTHER PTHR11206 222 461 1.4E-45 T 20-04-2016 AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PANTHER PTHR11206 487 509 1.4E-45 T 20-04-2016 AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PANTHER PTHR11206 79 88 1.4E-45 T 20-04-2016 AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PANTHER PTHR11206:SF90 116 123 1.4E-45 T 20-04-2016 AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PANTHER PTHR11206:SF90 222 461 1.4E-45 T 20-04-2016 AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PANTHER PTHR11206:SF90 487 509 1.4E-45 T 20-04-2016 AMC99_RS01230 b084711ed1829553ce7e5efcf25a312e 534 PANTHER PTHR11206:SF90 79 88 1.4E-45 T 20-04-2016 AMC99_RS00695 4f442796b3c6c684da27842eafb1d1f2 394 SUPERFAMILY SSF63867 326 392 1.44E-11 T 20-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS00695 4f442796b3c6c684da27842eafb1d1f2 394 SUPERFAMILY SSF53218 171 316 8.25E-31 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS00695 4f442796b3c6c684da27842eafb1d1f2 394 Gene3D G3DSA:3.90.105.10 125 156 3.6E-9 T 20-04-2016 AMC99_RS00695 4f442796b3c6c684da27842eafb1d1f2 394 PANTHER PTHR10192 1 392 1.5E-98 T 20-04-2016 AMC99_RS00695 4f442796b3c6c684da27842eafb1d1f2 394 Pfam PF00994 Probable molybdopterin binding domain 174 308 1.7E-15 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS00695 4f442796b3c6c684da27842eafb1d1f2 394 Gene3D G3DSA:2.170.190.11 45 124 7.6E-25 T 20-04-2016 AMC99_RS00695 4f442796b3c6c684da27842eafb1d1f2 394 Gene3D G3DSA:2.40.340.10 328 391 8.9E-9 T 20-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS00695 4f442796b3c6c684da27842eafb1d1f2 394 Pfam PF03453 MoeA N-terminal region (domain I and II) 2 160 1.3E-31 T 20-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS00695 4f442796b3c6c684da27842eafb1d1f2 394 Gene3D G3DSA:3.40.980.10 157 321 3.7E-44 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS00695 4f442796b3c6c684da27842eafb1d1f2 394 SMART SM00852 174 313 1.6E-24 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS00695 4f442796b3c6c684da27842eafb1d1f2 394 Pfam PF03454 MoeA C-terminal region (domain IV) 328 393 3.0E-9 T 20-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS00695 4f442796b3c6c684da27842eafb1d1f2 394 SUPERFAMILY SSF63882 1 167 1.31E-44 T 20-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS04725 be6a3eb9ec438637b02ee23f62ee478c 322 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 19 322 1.2E-99 T 20-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMC99_RS04725 be6a3eb9ec438637b02ee23f62ee478c 322 Hamap MF_00008 Thymidylate synthase [thyA]. 17 322 42.088 T 20-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMC99_RS04725 be6a3eb9ec438637b02ee23f62ee478c 322 ProSitePatterns PS00091 Thymidylate synthase active site. 180 208 - T 20-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMC99_RS04725 be6a3eb9ec438637b02ee23f62ee478c 322 PANTHER PTHR11548 15 102 2.5E-122 T 20-04-2016 AMC99_RS04725 be6a3eb9ec438637b02ee23f62ee478c 322 PANTHER PTHR11548 133 322 2.5E-122 T 20-04-2016 AMC99_RS04725 be6a3eb9ec438637b02ee23f62ee478c 322 Gene3D G3DSA:3.30.572.10 12 322 9.3E-109 T 20-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMC99_RS04725 be6a3eb9ec438637b02ee23f62ee478c 322 SUPERFAMILY SSF55831 9 322 8.64E-111 T 20-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMC99_RS04725 be6a3eb9ec438637b02ee23f62ee478c 322 Pfam PF00303 Thymidylate synthase 19 322 3.4E-101 T 20-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMC99_RS04725 be6a3eb9ec438637b02ee23f62ee478c 322 PRINTS PR00108 Thymidylate synthase family signature 217 243 4.7E-38 T 20-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMC99_RS04725 be6a3eb9ec438637b02ee23f62ee478c 322 PRINTS PR00108 Thymidylate synthase family signature 59 80 4.7E-38 T 20-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMC99_RS04725 be6a3eb9ec438637b02ee23f62ee478c 322 PRINTS PR00108 Thymidylate synthase family signature 255 272 4.7E-38 T 20-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMC99_RS04725 be6a3eb9ec438637b02ee23f62ee478c 322 PRINTS PR00108 Thymidylate synthase family signature 195 210 4.7E-38 T 20-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMC99_RS04725 be6a3eb9ec438637b02ee23f62ee478c 322 PRINTS PR00108 Thymidylate synthase family signature 169 188 4.7E-38 T 20-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMC99_RS01090 3e8588766d3b8c80da8bbf98c5d48579 139 PANTHER PTHR39434:SF1 1 138 1.7E-46 T 20-04-2016 AMC99_RS01090 3e8588766d3b8c80da8bbf98c5d48579 139 Gene3D G3DSA:3.10.180.10 6 133 1.8E-26 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS01090 3e8588766d3b8c80da8bbf98c5d48579 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 127 6.1E-8 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_RS01090 3e8588766d3b8c80da8bbf98c5d48579 139 SUPERFAMILY SSF54593 2 128 6.18E-25 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS01090 3e8588766d3b8c80da8bbf98c5d48579 139 PANTHER PTHR39434 1 138 1.7E-46 T 20-04-2016 AMC99_RS13425 52c50a35992dbabb49e15080142ce891 405 Pfam PF00266 Aminotransferase class-V 73 338 1.6E-20 T 20-04-2016 IPR000192 Aminotransferase class V domain AMC99_RS13425 52c50a35992dbabb49e15080142ce891 405 PIRSF PIRSF038800 1 396 1.4E-135 T 20-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 AMC99_RS13425 52c50a35992dbabb49e15080142ce891 405 PANTHER PTHR14084 2 398 2.0E-126 T 20-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 AMC99_RS13425 52c50a35992dbabb49e15080142ce891 405 TIGRFAM TIGR01814 kynureninase: kynureninase 6 387 6.0E-85 T 20-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 AMC99_RS13425 52c50a35992dbabb49e15080142ce891 405 Hamap MF_01970 Kynureninase [kynU]. 1 388 33.636 T 20-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 AMC99_RS13425 52c50a35992dbabb49e15080142ce891 405 Gene3D G3DSA:3.40.640.10 71 247 3.7E-20 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS13425 52c50a35992dbabb49e15080142ce891 405 SUPERFAMILY SSF53383 3 388 4.2E-83 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS13425 52c50a35992dbabb49e15080142ce891 405 Gene3D G3DSA:3.90.1150.10 248 405 1.5E-53 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 251 1.1E-99 T 20-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 8.8E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 8.8E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.8E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 8.8E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 8.8E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 8.8E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 6.0E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 6.0E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 6.0E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 Gene3D G3DSA:3.40.50.720 2 250 1.0E-75 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 SUPERFAMILY SSF51735 4 250 3.22E-76 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 249 5.3E-54 T 20-04-2016 AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 PANTHER PTHR24321 1 250 2.1E-50 T 20-04-2016 AMC99_RS06550 a0164f5367572b5146566fdb387766e8 251 PANTHER PTHR24321:SF6 1 250 2.1E-50 T 20-04-2016 AMC99_RS01200 b1de32a25c72c9673657a2ba04b79c03 558 PANTHER PTHR14359 268 556 1.2E-146 T 20-04-2016 AMC99_RS01200 b1de32a25c72c9673657a2ba04b79c03 558 Gene3D G3DSA:3.40.50.10300 339 552 8.7E-83 T 20-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 AMC99_RS01200 b1de32a25c72c9673657a2ba04b79c03 558 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 342 523 1.5E-71 T 20-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 AMC99_RS01200 b1de32a25c72c9673657a2ba04b79c03 558 SUPERFAMILY SSF102645 340 552 5.89E-72 T 20-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 AMC99_RS01200 b1de32a25c72c9673657a2ba04b79c03 558 PANTHER PTHR14359 2 140 1.2E-146 T 20-04-2016 AMC99_RS01200 b1de32a25c72c9673657a2ba04b79c03 558 SUPERFAMILY SSF52507 1 174 2.62E-58 T 20-04-2016 IPR003382 Flavoprotein GO:0003824 AMC99_RS01200 b1de32a25c72c9673657a2ba04b79c03 558 PANTHER PTHR14359:SF20 2 140 1.2E-146 T 20-04-2016 AMC99_RS01200 b1de32a25c72c9673657a2ba04b79c03 558 PANTHER PTHR14359:SF20 268 556 1.2E-146 T 20-04-2016 AMC99_RS01200 b1de32a25c72c9673657a2ba04b79c03 558 Pfam PF02441 Flavoprotein 1 129 1.5E-31 T 20-04-2016 IPR003382 Flavoprotein GO:0003824 AMC99_RS01200 b1de32a25c72c9673657a2ba04b79c03 558 Gene3D G3DSA:3.40.50.1950 1 175 3.5E-60 T 20-04-2016 IPR003382 Flavoprotein GO:0003824 AMC99_RS13190 8118aea96a65c9ea64a57d1ccdc9bcd4 289 Pfam PF12697 Alpha/beta hydrolase family 31 281 1.2E-24 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS13190 8118aea96a65c9ea64a57d1ccdc9bcd4 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 5.9E-7 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS13190 8118aea96a65c9ea64a57d1ccdc9bcd4 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 5.9E-7 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS13190 8118aea96a65c9ea64a57d1ccdc9bcd4 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 5.9E-7 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS13190 8118aea96a65c9ea64a57d1ccdc9bcd4 289 PANTHER PTHR10992 16 174 4.8E-51 T 20-04-2016 AMC99_RS13190 8118aea96a65c9ea64a57d1ccdc9bcd4 289 PANTHER PTHR10992 206 289 4.8E-51 T 20-04-2016 AMC99_RS13190 8118aea96a65c9ea64a57d1ccdc9bcd4 289 SUPERFAMILY SSF53474 4 289 3.75E-59 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS13190 8118aea96a65c9ea64a57d1ccdc9bcd4 289 Gene3D G3DSA:3.40.50.1820 5 289 2.0E-69 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS09915 7b18d757ef6d653c98b86fe2f24f9233 682 PANTHER PTHR38469 6 679 7.9E-131 T 20-04-2016 AMC99_RS09915 7b18d757ef6d653c98b86fe2f24f9233 682 SUPERFAMILY SSF50494 606 650 1.57E-20 T 20-04-2016 IPR009003 Peptidase S1, PA clan AMC99_RS09915 7b18d757ef6d653c98b86fe2f24f9233 682 SUPERFAMILY SSF50494 174 272 1.57E-20 T 20-04-2016 IPR009003 Peptidase S1, PA clan AMC99_RS09915 7b18d757ef6d653c98b86fe2f24f9233 682 SUPERFAMILY SSF50494 63 96 1.57E-20 T 20-04-2016 IPR009003 Peptidase S1, PA clan AMC99_RS09915 7b18d757ef6d653c98b86fe2f24f9233 682 PANTHER PTHR38469:SF1 6 679 7.9E-131 T 20-04-2016 AMC99_RS09915 7b18d757ef6d653c98b86fe2f24f9233 682 Gene3D G3DSA:2.40.10.10 575 660 5.9E-12 T 20-04-2016 AMC99_RS09915 7b18d757ef6d653c98b86fe2f24f9233 682 Pfam PF10459 Peptidase S46 24 680 2.9E-204 T 20-04-2016 IPR019500 Peptidase S46 GO:0008239|GO:0070009 AMC99_RS02445 532550a3f173a57a369a424e9170e4fc 466 Pfam PF02614 Glucuronate isomerase 21 462 1.2E-76 T 20-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 AMC99_RS02445 532550a3f173a57a369a424e9170e4fc 466 PANTHER PTHR30068 10 466 1.1E-164 T 20-04-2016 AMC99_RS02445 532550a3f173a57a369a424e9170e4fc 466 PANTHER PTHR30068:SF4 10 466 1.1E-164 T 20-04-2016 AMC99_RS02445 532550a3f173a57a369a424e9170e4fc 466 SUPERFAMILY SSF51556 7 465 1.46E-158 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS02445 532550a3f173a57a369a424e9170e4fc 466 Gene3D G3DSA:3.20.20.140 147 466 1.3E-148 T 20-04-2016 AMC99_RS02445 532550a3f173a57a369a424e9170e4fc 466 Gene3D G3DSA:3.20.20.140 8 50 1.3E-148 T 20-04-2016 AMC99_RS02445 532550a3f173a57a369a424e9170e4fc 466 Hamap MF_00675 Uronate isomerase [uxaC]. 4 466 39.954 T 20-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 AMC99_RS02445 532550a3f173a57a369a424e9170e4fc 466 Gene3D G3DSA:1.10.2020.10 52 146 2.6E-28 T 20-04-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 AMC99_RS11035 cbc4157be9dc3d3f98c1af371e2f85fb 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 41 60 8.64E-18 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMC99_RS11035 cbc4157be9dc3d3f98c1af371e2f85fb 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 14 30 8.64E-18 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMC99_RS11035 cbc4157be9dc3d3f98c1af371e2f85fb 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 41 8.64E-18 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMC99_RS11035 cbc4157be9dc3d3f98c1af371e2f85fb 160 Gene3D G3DSA:3.30.70.920 67 157 2.1E-31 T 20-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMC99_RS11035 cbc4157be9dc3d3f98c1af371e2f85fb 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 15 61 2.3E-17 T 20-04-2016 AMC99_RS11035 cbc4157be9dc3d3f98c1af371e2f85fb 160 SUPERFAMILY SSF46785 13 73 4.0E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS11035 cbc4157be9dc3d3f98c1af371e2f85fb 160 PANTHER PTHR30154:SF0 6 155 5.5E-53 T 20-04-2016 AMC99_RS11035 cbc4157be9dc3d3f98c1af371e2f85fb 160 Gene3D G3DSA:1.10.10.10 15 66 1.4E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS11035 cbc4157be9dc3d3f98c1af371e2f85fb 160 Pfam PF01037 Lrp/AsnC ligand binding domain 81 154 2.0E-23 T 20-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMC99_RS11035 cbc4157be9dc3d3f98c1af371e2f85fb 160 SMART SM00344 14 123 9.6E-46 T 20-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMC99_RS11035 cbc4157be9dc3d3f98c1af371e2f85fb 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 32 58 - T 20-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMC99_RS11035 cbc4157be9dc3d3f98c1af371e2f85fb 160 PANTHER PTHR30154 6 155 5.5E-53 T 20-04-2016 AMC99_RS11035 cbc4157be9dc3d3f98c1af371e2f85fb 160 SUPERFAMILY SSF54909 77 157 1.74E-20 T 20-04-2016 IPR011008 Dimeric alpha-beta barrel AMC99_RS01375 4288e8253afd4495521ef25e80997239 318 Pfam PF00106 short chain dehydrogenase 22 227 1.6E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS01375 4288e8253afd4495521ef25e80997239 318 Gene3D G3DSA:3.40.50.720 17 273 6.7E-64 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS01375 4288e8253afd4495521ef25e80997239 318 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 5.5E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS01375 4288e8253afd4495521ef25e80997239 318 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 221 5.5E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS01375 4288e8253afd4495521ef25e80997239 318 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 5.5E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS01375 4288e8253afd4495521ef25e80997239 318 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 110 5.5E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS01375 4288e8253afd4495521ef25e80997239 318 PANTHER PTHR24320 1 313 1.5E-119 T 20-04-2016 AMC99_RS01375 4288e8253afd4495521ef25e80997239 318 SUPERFAMILY SSF51735 19 279 3.12E-60 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02735 16a8c008a4360d03a40f3c7eb38fd936 251 PANTHER PTHR30456:SF0 3 249 3.3E-118 T 20-04-2016 AMC99_RS02735 16a8c008a4360d03a40f3c7eb38fd936 251 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 242 8.8E-95 T 20-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 AMC99_RS02735 16a8c008a4360d03a40f3c7eb38fd936 251 SUPERFAMILY SSF63892 5 246 3.79E-90 T 20-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 AMC99_RS02735 16a8c008a4360d03a40f3c7eb38fd936 251 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 243 4.8E-88 T 20-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 AMC99_RS02735 16a8c008a4360d03a40f3c7eb38fd936 251 Gene3D G3DSA:3.20.20.70 4 246 4.5E-100 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS02735 16a8c008a4360d03a40f3c7eb38fd936 251 PANTHER PTHR30456 3 249 3.3E-118 T 20-04-2016 AMC99_RS02735 16a8c008a4360d03a40f3c7eb38fd936 251 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 247 117.968 T 20-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 AMC99_RS03615 31c3597d65304c9d7a1a680d80298c55 173 PANTHER PTHR36922 1 173 1.2E-34 T 20-04-2016 AMC99_RS03615 31c3597d65304c9d7a1a680d80298c55 173 SUPERFAMILY SSF109854 4 169 2.2E-43 T 20-04-2016 AMC99_RS03615 31c3597d65304c9d7a1a680d80298c55 173 PANTHER PTHR36922:SF1 1 173 1.2E-34 T 20-04-2016 AMC99_RS03615 31c3597d65304c9d7a1a680d80298c55 173 Pfam PF09351 Domain of unknown function (DUF1993) 5 166 1.7E-40 T 20-04-2016 IPR018531 Domain of unknown function DUF1993 AMC99_RS03615 31c3597d65304c9d7a1a680d80298c55 173 Gene3D G3DSA:1.20.120.450 1 167 7.2E-47 T 20-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase AMC99_RS10280 b1e062642c90e445a45ac2b6f0518ed6 157 Pfam PF01152 Bacterial-like globin 47 151 4.7E-5 T 20-04-2016 IPR001486 Truncated hemoglobin GO:0019825 AMC99_RS10280 b1e062642c90e445a45ac2b6f0518ed6 157 Gene3D G3DSA:1.10.490.10 43 156 5.7E-25 T 20-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMC99_RS10280 b1e062642c90e445a45ac2b6f0518ed6 157 SUPERFAMILY SSF46458 45 152 3.7E-20 T 20-04-2016 IPR009050 Globin-like AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 262 400 1.1E-16 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 SUPERFAMILY SSF47226 1 122 1.96E-27 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 355 9.6E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 317 9.6E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 379 9.6E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 398 9.6E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 PANTHER PTHR22617 117 555 9.8E-123 T 20-04-2016 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 Pfam PF01627 Hpt domain 3 102 1.6E-13 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 SUPERFAMILY SSF50341 400 532 1.44E-24 T 20-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 Gene3D G3DSA:2.30.30.40 401 422 9.6E-11 T 20-04-2016 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 Gene3D G3DSA:2.30.30.40 489 533 9.6E-11 T 20-04-2016 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 SUPERFAMILY SSF55874 218 399 6.68E-40 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 SMART SM00073 1 98 7.8E-17 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 Gene3D G3DSA:3.30.565.10 217 400 3.5E-35 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 PANTHER PTHR22617:SF6 117 555 9.8E-123 T 20-04-2016 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 Gene3D G3DSA:1.10.287.560 153 214 7.0E-6 T 20-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 SUPERFAMILY SSF47384 153 214 7.45E-5 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 Pfam PF01584 CheW-like domain 406 533 8.8E-19 T 20-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 SMART SM00260 393 534 9.1E-20 T 20-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 SMART SM01231 152 213 3.4E-8 T 20-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 SMART SM00387 258 401 1.3E-24 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS10080 00024a1e0d1e18b71b77b46c2f9b3294 787 Gene3D G3DSA:1.20.120.160 1 125 1.1E-30 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMC99_RS11375 dfe16c1584bbbd3a1a04114b426fa7df 185 Gene3D G3DSA:3.20.20.70 10 172 1.6E-21 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS11375 dfe16c1584bbbd3a1a04114b426fa7df 185 Pfam PF02581 Thiamine monophosphate synthase/TENI 28 173 2.4E-17 T 20-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AMC99_RS11375 dfe16c1584bbbd3a1a04114b426fa7df 185 SUPERFAMILY SSF51391 14 172 4.45E-23 T 20-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AMC99_RS13395 64b0cd8ee47f1422c487b8536a7ec0fc 152 SUPERFAMILY SSF109635 17 110 9.02E-32 T 20-04-2016 AMC99_RS13395 64b0cd8ee47f1422c487b8536a7ec0fc 152 PANTHER PTHR33823:SF2 8 150 5.1E-41 T 20-04-2016 AMC99_RS13395 64b0cd8ee47f1422c487b8536a7ec0fc 152 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 26.348 T 20-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AMC99_RS13395 64b0cd8ee47f1422c487b8536a7ec0fc 152 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 20-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMC99_RS13395 64b0cd8ee47f1422c487b8536a7ec0fc 152 PANTHER PTHR33823 8 150 5.1E-41 T 20-04-2016 AMC99_RS13395 64b0cd8ee47f1422c487b8536a7ec0fc 152 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 6.8E-42 T 20-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AMC99_RS13395 64b0cd8ee47f1422c487b8536a7ec0fc 152 SUPERFAMILY SSF57716 111 148 3.71E-8 T 20-04-2016 AMC99_RS13395 64b0cd8ee47f1422c487b8536a7ec0fc 152 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 109 144 2.7E-9 T 20-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMC99_RS04565 d1dc22f12224a42d053695cb11acdaaa 140 PANTHER PTHR22769:SF35 10 138 9.2E-19 T 20-04-2016 AMC99_RS04565 d1dc22f12224a42d053695cb11acdaaa 140 SUPERFAMILY SSF55811 8 135 6.5E-28 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS04565 d1dc22f12224a42d053695cb11acdaaa 140 PRINTS PR00502 NUDIX hydrolase family signature 37 51 2.4E-6 T 20-04-2016 IPR020476 NUDIX hydrolase AMC99_RS04565 d1dc22f12224a42d053695cb11acdaaa 140 PRINTS PR00502 NUDIX hydrolase family signature 51 66 2.4E-6 T 20-04-2016 IPR020476 NUDIX hydrolase AMC99_RS04565 d1dc22f12224a42d053695cb11acdaaa 140 Gene3D G3DSA:3.90.79.10 10 132 6.1E-25 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS04565 d1dc22f12224a42d053695cb11acdaaa 140 Pfam PF00293 NUDIX domain 8 121 1.5E-15 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMC99_RS04565 d1dc22f12224a42d053695cb11acdaaa 140 PANTHER PTHR22769 10 138 9.2E-19 T 20-04-2016 AMC99_RS04565 d1dc22f12224a42d053695cb11acdaaa 140 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 20-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMC99_RS10315 145c0ebe5a837303d51a60532b719446 208 Gene3D G3DSA:3.40.50.1010 7 154 3.0E-13 T 20-04-2016 IPR029060 PIN domain-like AMC99_RS10315 145c0ebe5a837303d51a60532b719446 208 Pfam PF01936 NYN domain 13 154 7.1E-10 T 20-04-2016 IPR021139 NYN domain, limkain-b1-type AMC99_RS05735 aa58d846a443df12fbfb339be3a3ca7c 214 Hamap MF_00165 Thymidylate kinase [tmk]. 8 211 27.016 T 20-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AMC99_RS05735 aa58d846a443df12fbfb339be3a3ca7c 214 ProSitePatterns PS01331 Thymidylate kinase signature. 97 109 - T 20-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AMC99_RS05735 aa58d846a443df12fbfb339be3a3ca7c 214 SUPERFAMILY SSF52540 5 210 5.29E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05735 aa58d846a443df12fbfb339be3a3ca7c 214 Pfam PF02223 Thymidylate kinase 12 202 2.8E-43 T 20-04-2016 AMC99_RS05735 aa58d846a443df12fbfb339be3a3ca7c 214 Gene3D G3DSA:3.40.50.300 6 211 1.2E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05735 aa58d846a443df12fbfb339be3a3ca7c 214 PANTHER PTHR10344 4 211 9.4E-54 T 20-04-2016 AMC99_RS05735 aa58d846a443df12fbfb339be3a3ca7c 214 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 5 203 2.3E-46 T 20-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 Gene3D G3DSA:3.20.20.10 16 209 6.7E-47 T 20-04-2016 IPR029066 PLP-binding barrel AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 SMART SM01005 228 346 2.3E-33 T 20-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 PRINTS PR00992 Alanine racemase signature 190 217 2.0E-37 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 PRINTS PR00992 Alanine racemase signature 244 259 2.0E-37 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 PRINTS PR00992 Alanine racemase signature 124 136 2.0E-37 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 PRINTS PR00992 Alanine racemase signature 330 343 2.0E-37 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 PRINTS PR00992 Alanine racemase signature 281 298 2.0E-37 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 PRINTS PR00992 Alanine racemase signature 31 47 2.0E-37 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 PRINTS PR00992 Alanine racemase signature 261 276 2.0E-37 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 TIGRFAM TIGR00492 alr: alanine racemase 12 345 6.8E-56 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 SUPERFAMILY SSF50621 213 344 1.78E-31 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 PANTHER PTHR30511 3 344 1.2E-72 T 20-04-2016 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 Pfam PF00842 Alanine racemase, C-terminal domain 232 344 4.1E-26 T 20-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 Gene3D G3DSA:2.40.37.10 210 344 1.1E-35 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 SUPERFAMILY SSF51419 14 220 2.36E-48 T 20-04-2016 IPR029066 PLP-binding barrel AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 Pfam PF01168 Alanine racemase, N-terminal domain 14 216 4.4E-44 T 20-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 Hamap MF_01201 Alanine racemase. 6 345 23.038 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMC99_RS05660 78022605a1175f3cc7c70aaaa766f686 346 PANTHER PTHR30511:SF0 3 344 1.2E-72 T 20-04-2016 AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 PANTHER PTHR11922 8 521 2.3E-273 T 20-04-2016 AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 SUPERFAMILY SSF52317 8 236 2.5E-52 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 524 53.509 T 20-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 PANTHER PTHR11922:SF2 8 521 2.3E-273 T 20-04-2016 AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 Gene3D G3DSA:3.40.50.880 9 221 7.9E-55 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 202 8.2E-67 T 20-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 214 524 4.0E-147 T 20-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 PRINTS PR00097 Anthranilate synthase component II signature 176 189 9.0E-5 T 20-04-2016 AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 PRINTS PR00097 Anthranilate synthase component II signature 81 92 9.0E-5 T 20-04-2016 AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 Gene3D G3DSA:3.30.300.10 400 524 3.6E-50 T 20-04-2016 AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 Gene3D G3DSA:3.40.50.620 222 394 1.0E-61 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 SUPERFAMILY SSF54810 404 524 2.75E-49 T 20-04-2016 AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 9.2E-7 T 20-04-2016 AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 PRINTS PR00096 Glutamine amidotransferase superfamily signature 176 189 9.2E-7 T 20-04-2016 AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 9.2E-7 T 20-04-2016 AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 SUPERFAMILY SSF52402 196 418 2.87E-60 T 20-04-2016 AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 Pfam PF00117 Glutamine amidotransferase class-I 12 199 6.5E-37 T 20-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 Pfam PF02540 NAD synthase 215 254 2.4E-6 T 20-04-2016 IPR022310 NAD/GMP synthase AMC99_RS11240 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 Pfam PF00958 GMP synthase C terminal domain 432 523 1.2E-41 T 20-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AMC99_RS08370 f4244b64e585470d09ad4aa44f036ec8 718 Pfam PF13089 Polyphosphate kinase N-terminal domain 21 125 1.3E-36 T 20-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AMC99_RS08370 f4244b64e585470d09ad4aa44f036ec8 718 SUPERFAMILY SSF56024 510 690 6.8E-63 T 20-04-2016 AMC99_RS08370 f4244b64e585470d09ad4aa44f036ec8 718 PANTHER PTHR30218 1 716 1.1E-302 T 20-04-2016 AMC99_RS08370 f4244b64e585470d09ad4aa44f036ec8 718 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 21 692 2.1E-274 T 20-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMC99_RS08370 f4244b64e585470d09ad4aa44f036ec8 718 Gene3D G3DSA:3.30.1840.10 122 307 3.9E-51 T 20-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AMC99_RS08370 f4244b64e585470d09ad4aa44f036ec8 718 SUPERFAMILY SSF56024 327 502 9.42E-55 T 20-04-2016 AMC99_RS08370 f4244b64e585470d09ad4aa44f036ec8 718 Hamap MF_00347 Polyphosphate kinase [ppk]. 18 694 30.292 T 20-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMC99_RS08370 f4244b64e585470d09ad4aa44f036ec8 718 Pfam PF13090 Polyphosphate kinase C-terminal domain 339 690 4.5E-147 T 20-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AMC99_RS08370 f4244b64e585470d09ad4aa44f036ec8 718 PANTHER PTHR30218:SF0 1 716 1.1E-302 T 20-04-2016 AMC99_RS08370 f4244b64e585470d09ad4aa44f036ec8 718 Gene3D G3DSA:3.30.870.10 509 691 1.2E-66 T 20-04-2016 AMC99_RS08370 f4244b64e585470d09ad4aa44f036ec8 718 Pfam PF02503 Polyphosphate kinase middle domain 138 329 3.4E-51 T 20-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AMC99_RS08370 f4244b64e585470d09ad4aa44f036ec8 718 SUPERFAMILY SSF140356 18 115 3.92E-36 T 20-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AMC99_RS08370 f4244b64e585470d09ad4aa44f036ec8 718 Gene3D G3DSA:3.30.870.10 328 507 5.5E-73 T 20-04-2016 AMC99_RS08370 f4244b64e585470d09ad4aa44f036ec8 718 PIRSF PIRSF015589 2 702 2.3E-255 T 20-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMC99_RS08370 f4244b64e585470d09ad4aa44f036ec8 718 SUPERFAMILY SSF143724 123 321 1.43E-51 T 20-04-2016 AMC99_RS06495 3e8841475640605216282bb703b30cf7 460 SUPERFAMILY SSF52425 4 202 2.22E-52 T 20-04-2016 IPR006050 DNA photolyase, N-terminal AMC99_RS06495 3e8841475640605216282bb703b30cf7 460 PANTHER PTHR11455 6 457 2.3E-160 T 20-04-2016 AMC99_RS06495 3e8841475640605216282bb703b30cf7 460 Pfam PF00875 DNA photolyase 6 163 3.0E-45 T 20-04-2016 IPR006050 DNA photolyase, N-terminal AMC99_RS06495 3e8841475640605216282bb703b30cf7 460 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 318 330 - T 20-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AMC99_RS06495 3e8841475640605216282bb703b30cf7 460 Pfam PF03441 FAD binding domain of DNA photolyase 263 456 8.5E-72 T 20-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain AMC99_RS06495 3e8841475640605216282bb703b30cf7 460 Gene3D G3DSA:1.10.579.10 274 458 1.6E-67 T 20-04-2016 AMC99_RS06495 3e8841475640605216282bb703b30cf7 460 Gene3D G3DSA:1.25.40.80 140 273 3.5E-39 T 20-04-2016 AMC99_RS06495 3e8841475640605216282bb703b30cf7 460 PRINTS PR00147 DNA photolyase signature 377 391 5.0E-24 T 20-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 AMC99_RS06495 3e8841475640605216282bb703b30cf7 460 PRINTS PR00147 DNA photolyase signature 338 356 5.0E-24 T 20-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 AMC99_RS06495 3e8841475640605216282bb703b30cf7 460 PRINTS PR00147 DNA photolyase signature 318 334 5.0E-24 T 20-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 AMC99_RS06495 3e8841475640605216282bb703b30cf7 460 PRINTS PR00147 DNA photolyase signature 135 151 5.0E-24 T 20-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 AMC99_RS06495 3e8841475640605216282bb703b30cf7 460 SUPERFAMILY SSF48173 187 458 3.27E-91 T 20-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain AMC99_RS06495 3e8841475640605216282bb703b30cf7 460 PANTHER PTHR11455:SF18 6 457 2.3E-160 T 20-04-2016 AMC99_RS06495 3e8841475640605216282bb703b30cf7 460 Gene3D G3DSA:3.40.50.620 2 139 9.6E-44 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS06495 3e8841475640605216282bb703b30cf7 460 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 338 357 - T 20-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AMC99_RS05125 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 7.0E-32 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMC99_RS05125 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 89 105 7.0E-32 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMC99_RS05125 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 116 138 7.0E-32 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMC99_RS05125 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 7.0E-32 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMC99_RS05125 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 Pfam PF01467 Cytidylyltransferase-like 7 136 1.7E-18 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMC99_RS05125 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 162 34.172 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMC99_RS05125 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 159 4.2E-57 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMC99_RS05125 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 SUPERFAMILY SSF52374 4 159 1.74E-40 T 20-04-2016 AMC99_RS05125 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 PANTHER PTHR21342 1 166 4.1E-67 T 20-04-2016 AMC99_RS05125 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 59 6.8E-19 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMC99_RS05125 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 PANTHER PTHR21342:SF1 1 166 4.1E-67 T 20-04-2016 AMC99_RS05125 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 Gene3D G3DSA:3.40.50.620 3 161 3.4E-51 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS00620 f2b94bb1f72167f5153cbc0080a9ab38 212 PANTHER PTHR11002:SF17 1 212 2.1E-71 T 20-04-2016 AMC99_RS00620 f2b94bb1f72167f5153cbc0080a9ab38 212 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 61 68 - T 20-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS00620 f2b94bb1f72167f5153cbc0080a9ab38 212 SUPERFAMILY SSF53056 6 209 1.44E-50 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS00620 f2b94bb1f72167f5153cbc0080a9ab38 212 Gene3D G3DSA:3.40.1050.10 5 209 4.5E-51 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS00620 f2b94bb1f72167f5153cbc0080a9ab38 212 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 98 118 - T 20-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS00620 f2b94bb1f72167f5153cbc0080a9ab38 212 Pfam PF00484 Carbonic anhydrase 57 205 8.2E-36 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS00620 f2b94bb1f72167f5153cbc0080a9ab38 212 SMART SM00947 49 209 3.9E-49 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS00620 f2b94bb1f72167f5153cbc0080a9ab38 212 PANTHER PTHR11002 1 212 2.1E-71 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS11510 dc1494d481d631652057b98ec151b9fb 409 PIRSF PIRSF000429 1 409 2.0E-121 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMC99_RS11510 dc1494d481d631652057b98ec151b9fb 409 Gene3D G3DSA:3.40.47.10 6 125 8.4E-54 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS11510 dc1494d481d631652057b98ec151b9fb 409 Gene3D G3DSA:3.40.47.10 201 283 8.4E-54 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS11510 dc1494d481d631652057b98ec151b9fb 409 PANTHER PTHR18919:SF69 1 409 1.5E-143 T 20-04-2016 AMC99_RS11510 dc1494d481d631652057b98ec151b9fb 409 Pfam PF02803 Thiolase, C-terminal domain 286 407 6.0E-38 T 20-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AMC99_RS11510 dc1494d481d631652057b98ec151b9fb 409 Gene3D G3DSA:3.40.47.10 163 200 1.6E-56 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS11510 dc1494d481d631652057b98ec151b9fb 409 Gene3D G3DSA:3.40.47.10 287 407 1.6E-56 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS11510 dc1494d481d631652057b98ec151b9fb 409 PANTHER PTHR18919 1 409 1.5E-143 T 20-04-2016 AMC99_RS11510 dc1494d481d631652057b98ec151b9fb 409 SUPERFAMILY SSF53901 282 407 1.08E-39 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS11510 dc1494d481d631652057b98ec151b9fb 409 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 406 3.0E-123 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMC99_RS11510 dc1494d481d631652057b98ec151b9fb 409 SUPERFAMILY SSF53901 6 280 3.26E-75 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS11510 dc1494d481d631652057b98ec151b9fb 409 Pfam PF00108 Thiolase, N-terminal domain 7 273 1.9E-68 T 20-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AMC99_RS12480 04ed62c8f69bbc2910ae4eea2bf3569b 160 Pfam PF13185 GAF domain 52 158 2.3E-13 T 20-04-2016 IPR003018 GAF domain GO:0005515 AMC99_RS12480 04ed62c8f69bbc2910ae4eea2bf3569b 160 SUPERFAMILY SSF55781 14 160 2.18E-40 T 20-04-2016 IPR029016 GAF domain-like AMC99_RS12480 04ed62c8f69bbc2910ae4eea2bf3569b 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 99 116 - T 20-04-2016 IPR000614 Free Met sulfoxide reductase conserved site AMC99_RS12480 04ed62c8f69bbc2910ae4eea2bf3569b 160 Gene3D G3DSA:3.30.450.40 10 157 6.2E-50 T 20-04-2016 IPR029016 GAF domain-like AMC99_RS12480 04ed62c8f69bbc2910ae4eea2bf3569b 160 PANTHER PTHR21021 9 154 1.9E-50 T 20-04-2016 AMC99_RS12480 04ed62c8f69bbc2910ae4eea2bf3569b 160 SMART SM00065 32 159 0.0099 T 20-04-2016 IPR003018 GAF domain GO:0005515 AMC99_RS02720 3f3d9c7410aede853d0858800d31b910 363 PANTHER PTHR21716:SF7 15 344 3.6E-60 T 20-04-2016 AMC99_RS02720 3f3d9c7410aede853d0858800d31b910 363 Pfam PF01594 Domain of unknown function DUF20 33 341 6.6E-39 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like AMC99_RS02720 3f3d9c7410aede853d0858800d31b910 363 PANTHER PTHR21716 15 344 3.6E-60 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like AMC99_RS05540 272bc31b30b6458aac5a279788df39a2 388 Gene3D G3DSA:3.40.50.2300 283 366 1.0E-27 T 20-04-2016 AMC99_RS05540 272bc31b30b6458aac5a279788df39a2 388 Gene3D G3DSA:3.40.50.2300 56 159 1.0E-27 T 20-04-2016 AMC99_RS05540 272bc31b30b6458aac5a279788df39a2 388 PANTHER PTHR30483 57 379 9.4E-22 T 20-04-2016 AMC99_RS05540 272bc31b30b6458aac5a279788df39a2 388 Gene3D G3DSA:3.40.50.2300 161 240 2.2E-6 T 20-04-2016 AMC99_RS05540 272bc31b30b6458aac5a279788df39a2 388 Pfam PF13458 Periplasmic binding protein 57 374 1.4E-29 T 20-04-2016 IPR028081 Leucine-binding protein domain AMC99_RS05540 272bc31b30b6458aac5a279788df39a2 388 SUPERFAMILY SSF53822 57 379 1.7E-60 T 20-04-2016 IPR028082 Periplasmic binding protein-like I AMC99_RS08705 3b32df5cbc704fbee6d55a193c8e90eb 469 Pfam PF02646 RmuC family 144 431 1.1E-93 T 20-04-2016 IPR003798 DNA recombination RmuC AMC99_RS08705 3b32df5cbc704fbee6d55a193c8e90eb 469 PANTHER PTHR30563 75 468 3.1E-65 T 20-04-2016 AMC99_RS12545 fb52e7205f8daa5c4e623f22eef7f100 185 Gene3D G3DSA:3.40.630.30 1 183 1.2E-40 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS12545 fb52e7205f8daa5c4e623f22eef7f100 185 PANTHER PTHR13256:SF10 2 153 5.5E-26 T 20-04-2016 AMC99_RS12545 fb52e7205f8daa5c4e623f22eef7f100 185 Pfam PF13302 Acetyltransferase (GNAT) domain 10 152 1.6E-25 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS12545 fb52e7205f8daa5c4e623f22eef7f100 185 PANTHER PTHR13256 2 153 5.5E-26 T 20-04-2016 AMC99_RS12545 fb52e7205f8daa5c4e623f22eef7f100 185 SUPERFAMILY SSF55729 2 153 1.01E-32 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS07390 2d9409f4c10d72f2ea0e5d616788d2be 448 Gene3D G3DSA:3.90.1300.10 12 446 9.6E-111 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS07390 2d9409f4c10d72f2ea0e5d616788d2be 448 PANTHER PTHR11895:SF55 12 448 5.6E-111 T 20-04-2016 AMC99_RS07390 2d9409f4c10d72f2ea0e5d616788d2be 448 SUPERFAMILY SSF75304 11 445 1.44E-108 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS07390 2d9409f4c10d72f2ea0e5d616788d2be 448 Pfam PF01425 Amidase 28 311 5.4E-75 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS07390 2d9409f4c10d72f2ea0e5d616788d2be 448 Pfam PF01425 Amidase 341 434 1.1E-6 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS07390 2d9409f4c10d72f2ea0e5d616788d2be 448 PANTHER PTHR11895 12 448 5.6E-111 T 20-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 367 3.1E-89 T 20-04-2016 IPR028053 Membrane insertase YidC, N-terminal AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 PRINTS PR01900 YidC translocation/secretion protein signature 354 370 2.9E-13 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 PRINTS PR01900 YidC translocation/secretion protein signature 502 517 2.9E-13 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 PRINTS PR01900 YidC translocation/secretion protein signature 521 545 2.9E-13 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 Pfam PF02096 60Kd inner membrane protein 369 565 6.9E-59 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 568 20.708 T 20-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 PRINTS PR00701 60kDa inner membrane protein signature 430 453 8.0E-15 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 PRINTS PR00701 60kDa inner membrane protein signature 339 359 8.0E-15 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 PRINTS PR00701 60kDa inner membrane protein signature 3 24 8.0E-15 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 PRINTS PR00701 60kDa inner membrane protein signature 262 277 8.0E-15 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 PANTHER PTHR12428 342 478 2.2E-76 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 PANTHER PTHR12428 498 573 2.2E-76 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 PANTHER PTHR12428:SF14 498 573 2.2E-76 T 20-04-2016 AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 PANTHER PTHR12428:SF14 342 478 2.2E-76 T 20-04-2016 AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 Pfam PF14849 YidC periplasmic domain 84 358 1.8E-72 T 20-04-2016 IPR028053 Membrane insertase YidC, N-terminal AMC99_RS01080 09cf622b288e5b84ffca6fd9728d49d8 594 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 368 565 8.8E-68 T 20-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AMC99_RS13420 487ba6429dadd5c58a25cee538d7c7c1 214 PANTHER PTHR31118 8 208 3.4E-43 T 20-04-2016 AMC99_RS13420 487ba6429dadd5c58a25cee538d7c7c1 214 Hamap MF_01969 Kynurenine formamidase [kynB]. 8 211 41.692 T 20-04-2016 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 AMC99_RS13420 487ba6429dadd5c58a25cee538d7c7c1 214 TIGRFAM TIGR03035 trp_arylform: arylformamidase 9 211 1.1E-75 T 20-04-2016 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 AMC99_RS13420 487ba6429dadd5c58a25cee538d7c7c1 214 SUPERFAMILY SSF102198 7 209 8.63E-53 T 20-04-2016 AMC99_RS13420 487ba6429dadd5c58a25cee538d7c7c1 214 Pfam PF04199 Putative cyclase 10 154 2.0E-17 T 20-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 AMC99_RS13420 487ba6429dadd5c58a25cee538d7c7c1 214 Gene3D G3DSA:3.50.30.50 7 209 8.9E-53 T 20-04-2016 AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 Gene3D G3DSA:3.40.50.300 309 369 5.8E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 Gene3D G3DSA:3.40.50.300 36 120 5.8E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 Gene3D G3DSA:3.40.50.300 419 440 5.8E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 Pfam PF04851 Type III restriction enzyme, res subunit 46 170 5.2E-12 T 20-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 PANTHER PTHR24029 30 712 0.0 T 20-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 Pfam PF12344 Ultra-violet resistance protein B 583 624 4.9E-23 T 20-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 Gene3D G3DSA:4.10.860.10 651 692 1.1E-15 T 20-04-2016 IPR001943 UVR domain GO:0005515 AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 Hamap MF_00204 UvrABC system protein B [uvrB]. 34 690 41.277 T 20-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 35 687 1.1E-301 T 20-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 SMART SM00490 491 577 1.9E-17 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 Pfam PF00271 Helicase conserved C-terminal domain 463 576 8.2E-18 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 SUPERFAMILY SSF46600 647 689 9.15E-11 T 20-04-2016 IPR001943 UVR domain GO:0005515 AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 SMART SM00487 40 457 6.7E-25 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 SUPERFAMILY SSF52540 66 98 1.68E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 SUPERFAMILY SSF52540 488 618 1.68E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 Gene3D G3DSA:3.40.50.300 450 613 1.9E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 Pfam PF02151 UvrB/uvrC motif 656 689 2.4E-8 T 20-04-2016 IPR001943 UVR domain GO:0005515 AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 Gene3D G3DSA:3.30.2060.10 191 264 7.8E-14 T 20-04-2016 AMC99_RS03995 6a352e467f54be946dc686dcd870d2ef 728 SUPERFAMILY SSF52540 36 444 8.15E-126 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03750 721caa03014037ae671e54f2a2c9c623 107 SMART SM00418 15 93 3.2E-25 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS03750 721caa03014037ae671e54f2a2c9c623 107 PANTHER PTHR33154:SF10 3 105 1.8E-31 T 20-04-2016 AMC99_RS03750 721caa03014037ae671e54f2a2c9c623 107 PANTHER PTHR33154 3 105 1.8E-31 T 20-04-2016 AMC99_RS03750 721caa03014037ae671e54f2a2c9c623 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 1.4E-10 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS03750 721caa03014037ae671e54f2a2c9c623 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 1.4E-10 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS03750 721caa03014037ae671e54f2a2c9c623 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.4E-10 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS03750 721caa03014037ae671e54f2a2c9c623 107 Gene3D G3DSA:1.10.10.10 3 97 1.8E-35 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS03750 721caa03014037ae671e54f2a2c9c623 107 SUPERFAMILY SSF46785 9 96 8.17E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS03750 721caa03014037ae671e54f2a2c9c623 107 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 3.1E-14 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS08985 e13f7ddf234af3c158bcb4191043e4d5 280 Gene3D G3DSA:3.40.250.10 156 274 9.2E-36 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS08985 e13f7ddf234af3c158bcb4191043e4d5 280 PANTHER PTHR11364 1 274 3.4E-95 T 20-04-2016 AMC99_RS08985 e13f7ddf234af3c158bcb4191043e4d5 280 SMART SM00450 5 129 1.1E-18 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS08985 e13f7ddf234af3c158bcb4191043e4d5 280 SMART SM00450 152 273 2.0E-11 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS08985 e13f7ddf234af3c158bcb4191043e4d5 280 ProSitePatterns PS00380 Rhodanese signature 1. 39 50 - T 20-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AMC99_RS08985 e13f7ddf234af3c158bcb4191043e4d5 280 Pfam PF00581 Rhodanese-like domain 156 269 9.0E-10 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS08985 e13f7ddf234af3c158bcb4191043e4d5 280 Pfam PF00581 Rhodanese-like domain 7 125 6.6E-13 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS08985 e13f7ddf234af3c158bcb4191043e4d5 280 Gene3D G3DSA:3.40.250.10 2 138 3.0E-41 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS08985 e13f7ddf234af3c158bcb4191043e4d5 280 SUPERFAMILY SSF52821 3 139 4.85E-38 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS08985 e13f7ddf234af3c158bcb4191043e4d5 280 SUPERFAMILY SSF52821 156 276 6.29E-32 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS13490 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 PANTHER PTHR24322 8 127 4.5E-30 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13490 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 PANTHER PTHR24322 145 178 4.5E-30 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13490 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.5E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13490 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 1.5E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13490 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.5E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13490 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.5E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13490 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 Gene3D G3DSA:3.40.50.720 1 210 1.2E-51 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS13490 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 Pfam PF00106 short chain dehydrogenase 4 185 3.7E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS13490 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 PANTHER PTHR24322:SF540 8 127 4.5E-30 T 20-04-2016 AMC99_RS13490 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 PANTHER PTHR24322:SF540 145 178 4.5E-30 T 20-04-2016 AMC99_RS13490 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 SUPERFAMILY SSF51735 4 222 2.09E-53 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS11790 67b14cf850c450db07528b84c21fc840 1574 Gene3D G3DSA:3.40.50.720 1078 1173 3.9E-39 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS11790 67b14cf850c450db07528b84c21fc840 1574 Gene3D G3DSA:3.40.50.720 912 1023 3.9E-39 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS11790 67b14cf850c450db07528b84c21fc840 1574 PANTHER PTHR11606:SF1 81 136 0.0 T 20-04-2016 AMC99_RS11790 67b14cf850c450db07528b84c21fc840 1574 PANTHER PTHR11606:SF1 645 1067 0.0 T 20-04-2016 AMC99_RS11790 67b14cf850c450db07528b84c21fc840 1574 SUPERFAMILY SSF53223 735 926 1.44E-20 T 20-04-2016 AMC99_RS11790 67b14cf850c450db07528b84c21fc840 1574 PIRSF PIRSF036761 2 1574 0.0 T 20-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMC99_RS11790 67b14cf850c450db07528b84c21fc840 1574 SUPERFAMILY SSF51735 915 1017 2.31E-31 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS11790 67b14cf850c450db07528b84c21fc840 1574 SUPERFAMILY SSF51735 1053 1205 2.31E-31 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS11790 67b14cf850c450db07528b84c21fc840 1574 PANTHER PTHR11606 645 1067 0.0 T 20-04-2016 AMC99_RS11790 67b14cf850c450db07528b84c21fc840 1574 PANTHER PTHR11606 81 136 0.0 T 20-04-2016 AMC99_RS11790 67b14cf850c450db07528b84c21fc840 1574 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 72 1562 0.0 T 20-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMC99_RS11790 67b14cf850c450db07528b84c21fc840 1574 PANTHER PTHR11606 191 537 0.0 T 20-04-2016 AMC99_RS11790 67b14cf850c450db07528b84c21fc840 1574 PANTHER PTHR11606 1092 1337 0.0 T 20-04-2016 AMC99_RS11790 67b14cf850c450db07528b84c21fc840 1574 PANTHER PTHR11606:SF1 191 537 0.0 T 20-04-2016 AMC99_RS11790 67b14cf850c450db07528b84c21fc840 1574 PANTHER PTHR11606:SF1 1092 1337 0.0 T 20-04-2016 AMC99_RS01225 31c3ba767567eec966fe2c498f1d9b54 338 PANTHER PTHR10055:SF10 2 337 4.4E-166 T 20-04-2016 AMC99_RS01225 31c3ba767567eec966fe2c498f1d9b54 338 SUPERFAMILY SSF52374 2 335 1.58E-92 T 20-04-2016 AMC99_RS01225 31c3ba767567eec966fe2c498f1d9b54 338 PANTHER PTHR10055 2 337 4.4E-166 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMC99_RS01225 31c3ba767567eec966fe2c498f1d9b54 338 Gene3D G3DSA:1.10.240.10 211 303 3.5E-19 T 20-04-2016 AMC99_RS01225 31c3ba767567eec966fe2c498f1d9b54 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 335 3.7E-96 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMC99_RS01225 31c3ba767567eec966fe2c498f1d9b54 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 143 164 2.2E-28 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMC99_RS01225 31c3ba767567eec966fe2c498f1d9b54 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 2.2E-28 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMC99_RS01225 31c3ba767567eec966fe2c498f1d9b54 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 2.2E-28 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMC99_RS01225 31c3ba767567eec966fe2c498f1d9b54 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 200 210 2.2E-28 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMC99_RS01225 31c3ba767567eec966fe2c498f1d9b54 338 Gene3D G3DSA:3.40.50.620 1 210 2.0E-86 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS01225 31c3ba767567eec966fe2c498f1d9b54 338 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 18 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS01225 31c3ba767567eec966fe2c498f1d9b54 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 336 39.658 T 20-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 AMC99_RS01225 31c3ba767567eec966fe2c498f1d9b54 338 Pfam PF00579 tRNA synthetases class I (W and Y) 1 290 2.7E-79 T 20-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS04200 c80722862b5fee30553e89af37923030 486 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 485 33.559 T 20-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AMC99_RS04200 c80722862b5fee30553e89af37923030 486 SUPERFAMILY SSF52949 1 168 1.18E-13 T 20-04-2016 AMC99_RS04200 c80722862b5fee30553e89af37923030 486 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 29 133 2.7E-9 T 20-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMC99_RS04200 c80722862b5fee30553e89af37923030 486 PRINTS PR00481 Cytosol aminopeptidase signature 268 289 3.2E-50 T 20-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_RS04200 c80722862b5fee30553e89af37923030 486 PRINTS PR00481 Cytosol aminopeptidase signature 356 371 3.2E-50 T 20-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_RS04200 c80722862b5fee30553e89af37923030 486 PRINTS PR00481 Cytosol aminopeptidase signature 246 263 3.2E-50 T 20-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_RS04200 c80722862b5fee30553e89af37923030 486 PRINTS PR00481 Cytosol aminopeptidase signature 327 347 3.2E-50 T 20-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_RS04200 c80722862b5fee30553e89af37923030 486 PRINTS PR00481 Cytosol aminopeptidase signature 305 326 3.2E-50 T 20-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_RS04200 c80722862b5fee30553e89af37923030 486 Gene3D G3DSA:3.40.220.10 29 147 4.2E-12 T 20-04-2016 AMC99_RS04200 c80722862b5fee30553e89af37923030 486 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 331 338 - T 20-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMC99_RS04200 c80722862b5fee30553e89af37923030 486 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 170 476 4.2E-115 T 20-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMC99_RS04200 c80722862b5fee30553e89af37923030 486 SUPERFAMILY SSF53187 165 482 5.34E-116 T 20-04-2016 AMC99_RS04200 c80722862b5fee30553e89af37923030 486 Gene3D G3DSA:3.40.630.10 156 482 5.4E-130 T 20-04-2016 AMC99_RS04200 c80722862b5fee30553e89af37923030 486 PANTHER PTHR11963 29 481 1.0E-160 T 20-04-2016 AMC99_RS01710 236c7719a2f33f627ebfc7bea8305554 437 Pfam PF04055 Radical SAM superfamily 48 218 2.6E-14 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_RS01710 236c7719a2f33f627ebfc7bea8305554 437 SMART SM00729 43 263 1.7E-42 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMC99_RS01710 236c7719a2f33f627ebfc7bea8305554 437 PANTHER PTHR13932 12 433 1.0E-124 T 20-04-2016 AMC99_RS01710 236c7719a2f33f627ebfc7bea8305554 437 PIRSF PIRSF000167 4 437 1.1E-137 T 20-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 AMC99_RS01710 236c7719a2f33f627ebfc7bea8305554 437 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 11 437 2.4E-98 T 20-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 AMC99_RS01710 236c7719a2f33f627ebfc7bea8305554 437 PANTHER PTHR13932:SF6 12 433 1.0E-124 T 20-04-2016 AMC99_RS01710 236c7719a2f33f627ebfc7bea8305554 437 Gene3D G3DSA:3.80.30.20 44 238 7.6E-25 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMC99_RS01710 236c7719a2f33f627ebfc7bea8305554 437 SUPERFAMILY SSF102114 3 425 2.59E-94 T 20-04-2016 AMC99_RS04900 8d87153498feca109bec067483635b33 290 Pfam PF02548 Ketopantoate hydroxymethyltransferase 24 281 6.4E-101 T 20-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 AMC99_RS04900 8d87153498feca109bec067483635b33 290 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 24 286 40.188 T 20-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 AMC99_RS04900 8d87153498feca109bec067483635b33 290 SUPERFAMILY SSF51621 24 286 1.18E-92 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS04900 8d87153498feca109bec067483635b33 290 PANTHER PTHR20881 20 287 3.5E-125 T 20-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 AMC99_RS04900 8d87153498feca109bec067483635b33 290 PIRSF PIRSF000388 16 289 6.4E-99 T 20-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 AMC99_RS04900 8d87153498feca109bec067483635b33 290 Gene3D G3DSA:3.20.20.60 21 287 4.9E-105 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS04900 8d87153498feca109bec067483635b33 290 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 37 287 9.1E-91 T 20-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 AMC99_RS04260 c6fec9c802d8615d9c6a3ac16e253b7f 246 Gene3D G3DSA:3.40.190.80 129 242 8.3E-27 T 20-04-2016 AMC99_RS04260 c6fec9c802d8615d9c6a3ac16e253b7f 246 PANTHER PTHR20854 35 244 2.3E-29 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04260 c6fec9c802d8615d9c6a3ac16e253b7f 246 Gene3D G3DSA:3.30.540.10 4 116 7.3E-24 T 20-04-2016 AMC99_RS04260 c6fec9c802d8615d9c6a3ac16e253b7f 246 Pfam PF00459 Inositol monophosphatase family 35 242 7.1E-31 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04260 c6fec9c802d8615d9c6a3ac16e253b7f 246 SUPERFAMILY SSF56655 3 241 1.83E-49 T 20-04-2016 AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 Gene3D G3DSA:3.40.50.720 4 239 7.5E-84 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 PANTHER PTHR24322 147 179 9.3E-57 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 PANTHER PTHR24322 7 131 9.3E-57 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 SUPERFAMILY SSF51735 4 239 4.25E-80 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 PANTHER PTHR24322:SF559 147 179 9.3E-57 T 20-04-2016 AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 PANTHER PTHR24322:SF559 7 131 9.3E-57 T 20-04-2016 AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.8E-45 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 2.8E-45 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.8E-45 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.8E-45 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.8E-45 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 2.8E-45 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 183 1.9E-6 T 20-04-2016 AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 238 2.7E-61 T 20-04-2016 AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 239 1.1E-102 T 20-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.1E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.1E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS11675 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.1E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08330 a7ac404fecc75ad46c1ff6cbeec5161d 332 PANTHER PTHR11695 15 332 2.7E-113 T 20-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMC99_RS08330 a7ac404fecc75ad46c1ff6cbeec5161d 332 Pfam PF00107 Zinc-binding dehydrogenase 151 286 2.5E-24 T 20-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_RS08330 a7ac404fecc75ad46c1ff6cbeec5161d 332 PANTHER PTHR11695:SF31 15 332 2.7E-113 T 20-04-2016 AMC99_RS08330 a7ac404fecc75ad46c1ff6cbeec5161d 332 Gene3D G3DSA:3.40.50.720 146 269 1.7E-29 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08330 a7ac404fecc75ad46c1ff6cbeec5161d 332 SUPERFAMILY SSF51735 115 293 1.24E-41 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08330 a7ac404fecc75ad46c1ff6cbeec5161d 332 Gene3D G3DSA:3.90.180.10 1 145 1.4E-48 T 20-04-2016 IPR011032 GroES-like AMC99_RS08330 a7ac404fecc75ad46c1ff6cbeec5161d 332 SMART SM00829 10 329 9.4E-46 T 20-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_RS08330 a7ac404fecc75ad46c1ff6cbeec5161d 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 1.6E-11 T 20-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_RS08330 a7ac404fecc75ad46c1ff6cbeec5161d 332 SUPERFAMILY SSF50129 1 139 3.65E-40 T 20-04-2016 IPR011032 GroES-like AMC99_RS03475 978ad1c0de7434b181d591d90db308c1 271 SUPERFAMILY SSF54506 137 265 3.66E-48 T 20-04-2016 AMC99_RS03475 978ad1c0de7434b181d591d90db308c1 271 PANTHER PTHR31689 1 271 4.1E-103 T 20-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS03475 978ad1c0de7434b181d591d90db308c1 271 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 67 81 - T 20-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS03475 978ad1c0de7434b181d591d90db308c1 271 SUPERFAMILY SSF54506 3 125 6.48E-38 T 20-04-2016 AMC99_RS03475 978ad1c0de7434b181d591d90db308c1 271 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 263 1.3E-77 T 20-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS03475 978ad1c0de7434b181d591d90db308c1 271 Pfam PF01678 Diaminopimelate epimerase 146 259 2.0E-28 T 20-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS03475 978ad1c0de7434b181d591d90db308c1 271 Pfam PF01678 Diaminopimelate epimerase 5 118 4.3E-22 T 20-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS03475 978ad1c0de7434b181d591d90db308c1 271 Gene3D G3DSA:3.10.310.10 3 115 2.1E-36 T 20-04-2016 AMC99_RS03475 978ad1c0de7434b181d591d90db308c1 271 PANTHER PTHR31689:SF0 1 271 4.1E-103 T 20-04-2016 AMC99_RS03475 978ad1c0de7434b181d591d90db308c1 271 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 267 34.437 T 20-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS03475 978ad1c0de7434b181d591d90db308c1 271 Gene3D G3DSA:3.10.310.10 116 255 4.5E-51 T 20-04-2016 AMC99_RS09835 311e3994e18ba0198f7f3cf9e055ddff 410 Gene3D G3DSA:3.20.20.140 59 392 7.9E-74 T 20-04-2016 AMC99_RS09835 311e3994e18ba0198f7f3cf9e055ddff 410 PANTHER PTHR11647 1 405 8.2E-101 T 20-04-2016 AMC99_RS09835 311e3994e18ba0198f7f3cf9e055ddff 410 Gene3D G3DSA:2.30.40.10 2 58 9.1E-13 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS09835 311e3994e18ba0198f7f3cf9e055ddff 410 SUPERFAMILY SSF51338 354 408 6.34E-24 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS09835 311e3994e18ba0198f7f3cf9e055ddff 410 SUPERFAMILY SSF51338 7 56 6.34E-24 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS09835 311e3994e18ba0198f7f3cf9e055ddff 410 PANTHER PTHR11647:SF70 1 405 8.2E-101 T 20-04-2016 AMC99_RS09835 311e3994e18ba0198f7f3cf9e055ddff 410 Pfam PF01979 Amidohydrolase family 149 406 3.4E-11 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMC99_RS09835 311e3994e18ba0198f7f3cf9e055ddff 410 SUPERFAMILY SSF51556 47 355 4.86E-75 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS00275 faa31a30904b96d91354dc146640483d 556 PANTHER PTHR10799 89 534 6.9E-101 T 20-04-2016 AMC99_RS00275 faa31a30904b96d91354dc146640483d 556 SMART SM00490 414 499 2.1E-12 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS00275 faa31a30904b96d91354dc146640483d 556 Pfam PF00271 Helicase conserved C-terminal domain 388 499 8.7E-11 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS00275 faa31a30904b96d91354dc146640483d 556 SMART SM00487 91 273 6.2E-24 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_RS00275 faa31a30904b96d91354dc146640483d 556 Gene3D G3DSA:3.40.50.300 92 258 2.5E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00275 faa31a30904b96d91354dc146640483d 556 Pfam PF00176 SNF2 family N-terminal domain 114 331 7.9E-38 T 20-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 AMC99_RS00275 faa31a30904b96d91354dc146640483d 556 SUPERFAMILY SSF52540 209 263 1.04E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00275 faa31a30904b96d91354dc146640483d 556 SUPERFAMILY SSF52540 375 535 1.04E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00275 faa31a30904b96d91354dc146640483d 556 SUPERFAMILY SSF52540 79 295 4.92E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00275 faa31a30904b96d91354dc146640483d 556 Gene3D G3DSA:3.40.50.300 384 523 6.5E-16 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00565 abc739fa4cd864b853cf491f12a66782 434 SUPERFAMILY SSF47384 207 280 7.06E-6 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS00565 abc739fa4cd864b853cf491f12a66782 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 6.9E-8 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS00565 abc739fa4cd864b853cf491f12a66782 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 392 6.9E-8 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS00565 abc739fa4cd864b853cf491f12a66782 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 6.9E-8 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS00565 abc739fa4cd864b853cf491f12a66782 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 429 3.8E-18 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS00565 abc739fa4cd864b853cf491f12a66782 434 Gene3D G3DSA:3.30.565.10 293 431 1.9E-33 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS00565 abc739fa4cd864b853cf491f12a66782 434 SMART SM00387 330 433 1.9E-30 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS00565 abc739fa4cd864b853cf491f12a66782 434 PANTHER PTHR24423 16 23 5.4E-44 T 20-04-2016 AMC99_RS00565 abc739fa4cd864b853cf491f12a66782 434 PANTHER PTHR24423 198 415 5.4E-44 T 20-04-2016 AMC99_RS00565 abc739fa4cd864b853cf491f12a66782 434 SUPERFAMILY SSF55874 290 429 7.86E-32 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS00835 69b7f341bfe3dfd7315ee4aeaa78f8de 571 SUPERFAMILY SSF90123 21 313 1.44E-22 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMC99_RS00835 69b7f341bfe3dfd7315ee4aeaa78f8de 571 Gene3D G3DSA:3.40.50.300 350 560 2.2E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00835 69b7f341bfe3dfd7315ee4aeaa78f8de 571 PANTHER PTHR24221 10 560 8.8E-71 T 20-04-2016 AMC99_RS00835 69b7f341bfe3dfd7315ee4aeaa78f8de 571 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_RS00835 69b7f341bfe3dfd7315ee4aeaa78f8de 571 PANTHER PTHR24221:SF161 10 560 8.8E-71 T 20-04-2016 AMC99_RS00835 69b7f341bfe3dfd7315ee4aeaa78f8de 571 SUPERFAMILY SSF52540 342 561 3.03E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00835 69b7f341bfe3dfd7315ee4aeaa78f8de 571 Gene3D G3DSA:1.20.1560.10 23 284 3.5E-14 T 20-04-2016 AMC99_RS00835 69b7f341bfe3dfd7315ee4aeaa78f8de 571 Pfam PF00005 ABC transporter 370 516 8.8E-27 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS00835 69b7f341bfe3dfd7315ee4aeaa78f8de 571 Pfam PF00664 ABC transporter transmembrane region 71 275 5.0E-8 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMC99_RS00835 69b7f341bfe3dfd7315ee4aeaa78f8de 571 SMART SM00382 376 562 1.3E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS07515 c00d9eb22065818dbf034bc0abb2ab38 231 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 20-04-2016 IPR018280 Ribosomal protein S3, conserved site AMC99_RS07515 c00d9eb22065818dbf034bc0abb2ab38 231 SUPERFAMILY SSF54814 2 106 2.15E-36 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMC99_RS07515 c00d9eb22065818dbf034bc0abb2ab38 231 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 7.9E-37 T 20-04-2016 AMC99_RS07515 c00d9eb22065818dbf034bc0abb2ab38 231 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.112 T 20-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMC99_RS07515 c00d9eb22065818dbf034bc0abb2ab38 231 Pfam PF07650 KH domain 38 110 1.3E-17 T 20-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 AMC99_RS07515 c00d9eb22065818dbf034bc0abb2ab38 231 Gene3D G3DSA:3.30.300.20 17 107 1.4E-32 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta AMC99_RS07515 c00d9eb22065818dbf034bc0abb2ab38 231 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.1E-89 T 20-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMC99_RS07515 c00d9eb22065818dbf034bc0abb2ab38 231 SUPERFAMILY SSF54821 108 206 2.49E-37 T 20-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 AMC99_RS07515 c00d9eb22065818dbf034bc0abb2ab38 231 PANTHER PTHR11760:SF19 2 208 1.7E-118 T 20-04-2016 AMC99_RS07515 c00d9eb22065818dbf034bc0abb2ab38 231 SMART SM00322 60 125 7.9E-7 T 20-04-2016 IPR004087 K Homology domain GO:0003676 AMC99_RS07515 c00d9eb22065818dbf034bc0abb2ab38 231 PANTHER PTHR11760 2 208 1.7E-118 T 20-04-2016 AMC99_RS07515 c00d9eb22065818dbf034bc0abb2ab38 231 Gene3D G3DSA:3.30.1140.32 108 207 3.3E-43 T 20-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 AMC99_RS00675 13ede2b154086f23cda27a748d7bacc7 327 SMART SM00729 14 218 6.7E-11 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMC99_RS00675 13ede2b154086f23cda27a748d7bacc7 327 Pfam PF04055 Radical SAM superfamily 20 180 6.6E-31 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_RS00675 13ede2b154086f23cda27a748d7bacc7 327 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 327 3.8E-102 T 20-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS00675 13ede2b154086f23cda27a748d7bacc7 327 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 5 327 37.259 T 20-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS00675 13ede2b154086f23cda27a748d7bacc7 327 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 310 6.6E-33 T 20-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS00675 13ede2b154086f23cda27a748d7bacc7 327 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 20-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS00675 13ede2b154086f23cda27a748d7bacc7 327 Gene3D G3DSA:3.20.20.70 6 293 2.6E-72 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS00675 13ede2b154086f23cda27a748d7bacc7 327 PANTHER PTHR22960 5 283 1.9E-115 T 20-04-2016 AMC99_RS00675 13ede2b154086f23cda27a748d7bacc7 327 SUPERFAMILY SSF102114 6 282 6.93E-72 T 20-04-2016 AMC99_RS13035 645e2a5c115cd19d577b1f501cc52f7a 287 Hamap MF_00158 Pantothenate synthetase [panC]. 2 283 40.309 T 20-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 AMC99_RS13035 645e2a5c115cd19d577b1f501cc52f7a 287 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 27 68 2.4E-8 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMC99_RS13035 645e2a5c115cd19d577b1f501cc52f7a 287 SUPERFAMILY SSF52374 3 283 8.58E-103 T 20-04-2016 AMC99_RS13035 645e2a5c115cd19d577b1f501cc52f7a 287 PANTHER PTHR21299 6 281 2.0E-130 T 20-04-2016 AMC99_RS13035 645e2a5c115cd19d577b1f501cc52f7a 287 Gene3D G3DSA:3.40.50.620 2 166 2.9E-74 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS13035 645e2a5c115cd19d577b1f501cc52f7a 287 PANTHER PTHR21299:SF1 6 281 2.0E-130 T 20-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 AMC99_RS13035 645e2a5c115cd19d577b1f501cc52f7a 287 Gene3D G3DSA:3.30.1300.10 179 285 9.2E-31 T 20-04-2016 AMC99_RS13035 645e2a5c115cd19d577b1f501cc52f7a 287 Pfam PF02569 Pantoate-beta-alanine ligase 4 281 2.0E-100 T 20-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 AMC99_RS13035 645e2a5c115cd19d577b1f501cc52f7a 287 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 283 9.3E-94 T 20-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 AMC99_RS06140 147226126c17613a4d963797eeac9969 124 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 3 124 18.289 T 20-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AMC99_RS06140 147226126c17613a4d963797eeac9969 124 PANTHER PTHR11058:SF10 4 124 3.9E-49 T 20-04-2016 AMC99_RS06140 147226126c17613a4d963797eeac9969 124 PANTHER PTHR11058 4 124 3.9E-49 T 20-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 AMC99_RS06140 147226126c17613a4d963797eeac9969 124 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 27 123 1.6E-35 T 20-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 AMC99_RS01795 03733104d7a0854450a201160e5510f8 153 ProSitePatterns PS00818 Dps protein family signature 1. 34 50 - T 20-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AMC99_RS01795 03733104d7a0854450a201160e5510f8 153 PANTHER PTHR30295:SF6 7 153 4.7E-37 T 20-04-2016 AMC99_RS01795 03733104d7a0854450a201160e5510f8 153 SUPERFAMILY SSF47240 8 152 1.41E-35 T 20-04-2016 IPR009078 Ferritin-like superfamily AMC99_RS01795 03733104d7a0854450a201160e5510f8 153 Pfam PF00210 Ferritin-like domain 15 152 3.0E-24 T 20-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMC99_RS01795 03733104d7a0854450a201160e5510f8 153 Gene3D G3DSA:1.20.1260.10 6 153 5.7E-45 T 20-04-2016 IPR012347 Ferritin-related AMC99_RS01795 03733104d7a0854450a201160e5510f8 153 PIRSF PIRSF005900 2 153 7.3E-39 T 20-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AMC99_RS01795 03733104d7a0854450a201160e5510f8 153 PANTHER PTHR30295 7 153 4.7E-37 T 20-04-2016 AMC99_RS01795 03733104d7a0854450a201160e5510f8 153 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 34 50 1.6E-5 T 20-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AMC99_RS01795 03733104d7a0854450a201160e5510f8 153 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 130 148 1.6E-5 T 20-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AMC99_RS01795 03733104d7a0854450a201160e5510f8 153 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 58 74 1.6E-5 T 20-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AMC99_RS13630 5b6d56efc1dbd7676f3890c5eece53cd 444 PANTHER PTHR33840 32 322 1.4E-41 T 20-04-2016 AMC99_RS13630 5b6d56efc1dbd7676f3890c5eece53cd 444 PANTHER PTHR33840:SF4 32 322 1.4E-41 T 20-04-2016 AMC99_RS13630 5b6d56efc1dbd7676f3890c5eece53cd 444 SUPERFAMILY SSF53474 83 153 1.29E-6 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS13630 5b6d56efc1dbd7676f3890c5eece53cd 444 Gene3D G3DSA:3.40.50.1820 22 129 3.4E-4 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS13630 5b6d56efc1dbd7676f3890c5eece53cd 444 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 36 316 6.4E-50 T 20-04-2016 IPR018712 Domain of unknown function DUF2235 AMC99_RS03850 b22f259c4953f3a19e3cebea2bb33d6c 318 PANTHER PTHR38095 8 204 7.9E-17 T 20-04-2016 AMC99_RS03850 b22f259c4953f3a19e3cebea2bb33d6c 318 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 314 1.9E-54 T 20-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 AMC99_RS02470 1dc0082a32e580d5bcf0e15e5c3aa76b 632 Gene3D G3DSA:3.10.580.10 166 281 1.3E-34 T 20-04-2016 AMC99_RS02470 1dc0082a32e580d5bcf0e15e5c3aa76b 632 Gene3D G3DSA:2.60.120.10 8 139 1.9E-19 T 20-04-2016 IPR014710 RmlC-like jelly roll fold AMC99_RS02470 1dc0082a32e580d5bcf0e15e5c3aa76b 632 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 484 624 5.6E-41 T 20-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AMC99_RS02470 1dc0082a32e580d5bcf0e15e5c3aa76b 632 Pfam PF00027 Cyclic nucleotide-binding domain 40 120 3.5E-12 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain AMC99_RS02470 1dc0082a32e580d5bcf0e15e5c3aa76b 632 SUPERFAMILY SSF54631 165 285 2.53E-32 T 20-04-2016 AMC99_RS02470 1dc0082a32e580d5bcf0e15e5c3aa76b 632 SMART SM00100 20 137 4.3E-6 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain AMC99_RS02470 1dc0082a32e580d5bcf0e15e5c3aa76b 632 SUPERFAMILY SSF81301 270 407 2.21E-7 T 20-04-2016 AMC99_RS02470 1dc0082a32e580d5bcf0e15e5c3aa76b 632 Pfam PF03445 Putative nucleotidyltransferase DUF294 311 447 4.4E-39 T 20-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AMC99_RS02470 1dc0082a32e580d5bcf0e15e5c3aa76b 632 SUPERFAMILY SSF51206 7 130 2.23E-21 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like AMC99_RS02470 1dc0082a32e580d5bcf0e15e5c3aa76b 632 Pfam PF00571 CBS domain 230 282 3.8E-12 T 20-04-2016 IPR000644 CBS domain AMC99_RS02470 1dc0082a32e580d5bcf0e15e5c3aa76b 632 Pfam PF00571 CBS domain 167 219 2.1E-9 T 20-04-2016 IPR000644 CBS domain AMC99_RS02470 1dc0082a32e580d5bcf0e15e5c3aa76b 632 PANTHER PTHR11911 163 281 4.4E-28 T 20-04-2016 AMC99_RS02470 1dc0082a32e580d5bcf0e15e5c3aa76b 632 SMART SM00116 237 285 1.1E-9 T 20-04-2016 IPR000644 CBS domain AMC99_RS02470 1dc0082a32e580d5bcf0e15e5c3aa76b 632 SMART SM00116 173 220 2.2E-6 T 20-04-2016 IPR000644 CBS domain AMC99_RS10620 c4545e54ace3bab99f00cc6a46db096e 253 PANTHER PTHR11941:SF13 3 250 3.0E-82 T 20-04-2016 AMC99_RS10620 c4545e54ace3bab99f00cc6a46db096e 253 Gene3D G3DSA:1.10.12.10 194 253 2.6E-20 T 20-04-2016 IPR014748 Crontonase, C-terminal AMC99_RS10620 c4545e54ace3bab99f00cc6a46db096e 253 Gene3D G3DSA:3.90.226.10 2 192 4.1E-57 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS10620 c4545e54ace3bab99f00cc6a46db096e 253 SUPERFAMILY SSF52096 1 252 1.19E-75 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS10620 c4545e54ace3bab99f00cc6a46db096e 253 PANTHER PTHR11941 3 250 3.0E-82 T 20-04-2016 AMC99_RS10620 c4545e54ace3bab99f00cc6a46db096e 253 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 95 115 - T 20-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AMC99_RS10620 c4545e54ace3bab99f00cc6a46db096e 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 252 7.5E-50 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMC99_RS08105 e7423c9579200755c71fa965114f59ce 514 PRINTS PR00834 HtrA/DegQ protease family signature 196 213 4.0E-8 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_RS08105 e7423c9579200755c71fa965114f59ce 514 PRINTS PR00834 HtrA/DegQ protease family signature 174 191 4.0E-8 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_RS08105 e7423c9579200755c71fa965114f59ce 514 PRINTS PR00834 HtrA/DegQ protease family signature 61 73 4.0E-8 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_RS08105 e7423c9579200755c71fa965114f59ce 514 PRINTS PR00834 HtrA/DegQ protease family signature 88 108 4.0E-8 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_RS08105 e7423c9579200755c71fa965114f59ce 514 PANTHER PTHR22939 27 205 5.5E-12 T 20-04-2016 AMC99_RS08105 e7423c9579200755c71fa965114f59ce 514 Pfam PF13365 Trypsin-like peptidase domain 53 203 1.2E-18 T 20-04-2016 AMC99_RS08105 e7423c9579200755c71fa965114f59ce 514 Gene3D G3DSA:2.40.10.10 28 123 1.2E-10 T 20-04-2016 AMC99_RS08105 e7423c9579200755c71fa965114f59ce 514 Gene3D G3DSA:2.40.10.10 132 231 2.2E-13 T 20-04-2016 AMC99_RS08105 e7423c9579200755c71fa965114f59ce 514 SUPERFAMILY SSF50494 26 231 1.18E-29 T 20-04-2016 IPR009003 Peptidase S1, PA clan AMC99_RS03895 91a9871f9c8143f1751d38cf1391803c 368 SUPERFAMILY SSF51735 160 333 5.07E-44 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS03895 91a9871f9c8143f1751d38cf1391803c 368 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 20-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 AMC99_RS03895 91a9871f9c8143f1751d38cf1391803c 368 Gene3D G3DSA:3.90.180.10 1 189 5.3E-62 T 20-04-2016 IPR011032 GroES-like AMC99_RS03895 91a9871f9c8143f1751d38cf1391803c 368 PANTHER PTHR11695 128 368 5.4E-194 T 20-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMC99_RS03895 91a9871f9c8143f1751d38cf1391803c 368 PANTHER PTHR11695 15 108 5.4E-194 T 20-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMC99_RS03895 91a9871f9c8143f1751d38cf1391803c 368 PANTHER PTHR11695:SF560 128 368 5.4E-194 T 20-04-2016 AMC99_RS03895 91a9871f9c8143f1751d38cf1391803c 368 PANTHER PTHR11695:SF560 15 108 5.4E-194 T 20-04-2016 AMC99_RS03895 91a9871f9c8143f1751d38cf1391803c 368 SUPERFAMILY SSF50129 317 368 1.46E-12 T 20-04-2016 IPR011032 GroES-like AMC99_RS03895 91a9871f9c8143f1751d38cf1391803c 368 SUPERFAMILY SSF50129 1 188 6.39E-69 T 20-04-2016 IPR011032 GroES-like AMC99_RS03895 91a9871f9c8143f1751d38cf1391803c 368 Pfam PF00107 Zinc-binding dehydrogenase 197 317 1.4E-22 T 20-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_RS03895 91a9871f9c8143f1751d38cf1391803c 368 Gene3D G3DSA:3.40.50.720 190 306 8.2E-39 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS03895 91a9871f9c8143f1751d38cf1391803c 368 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 367 4.4E-186 T 20-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 AMC99_RS03895 91a9871f9c8143f1751d38cf1391803c 368 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 112 5.5E-23 T 20-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_RS06320 954edec50c8dbaef224fbc1691d46fe3 336 SUPERFAMILY SSF52540 144 308 8.5E-27 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06320 954edec50c8dbaef224fbc1691d46fe3 336 Gene3D G3DSA:3.40.50.300 143 317 3.3E-27 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06320 954edec50c8dbaef224fbc1691d46fe3 336 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 146 252 7.5E-9 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMC99_RS06320 954edec50c8dbaef224fbc1691d46fe3 336 PANTHER PTHR32309 99 335 1.1E-25 T 20-04-2016 AMC99_RS07385 c8d0ba6c7f4eff3b5b32caee19f8d7be 450 Gene3D G3DSA:3.40.710.10 41 352 4.6E-94 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS07385 c8d0ba6c7f4eff3b5b32caee19f8d7be 450 PANTHER PTHR22935 26 363 1.8E-92 T 20-04-2016 AMC99_RS07385 c8d0ba6c7f4eff3b5b32caee19f8d7be 450 Pfam PF00144 Beta-lactamase 47 338 6.6E-72 T 20-04-2016 IPR001466 Beta-lactamase-related AMC99_RS07385 c8d0ba6c7f4eff3b5b32caee19f8d7be 450 SUPERFAMILY SSF56601 28 351 9.24E-95 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS07385 c8d0ba6c7f4eff3b5b32caee19f8d7be 450 Pfam PF11954 Domain of unknown function (DUF3471) 360 438 5.1E-11 T 20-04-2016 IPR021860 Peptidase S12, Pab87-related, C-terminal AMC99_RS06060 8ab0d2145f9bad15c93704d06dc8a192 236 SUPERFAMILY SSF50037 192 235 3.43E-5 T 20-04-2016 IPR008988 Transcriptional repressor, C-terminal AMC99_RS06060 8ab0d2145f9bad15c93704d06dc8a192 236 Pfam PF02237 Biotin protein ligase C terminal domain 200 233 8.7E-5 T 20-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 AMC99_RS06060 8ab0d2145f9bad15c93704d06dc8a192 236 Gene3D G3DSA:2.30.30.100 190 235 5.4E-6 T 20-04-2016 AMC99_RS06060 8ab0d2145f9bad15c93704d06dc8a192 236 PANTHER PTHR12835 7 235 4.2E-32 T 20-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 AMC99_RS06060 8ab0d2145f9bad15c93704d06dc8a192 236 Gene3D G3DSA:3.30.930.10 2 184 8.6E-40 T 20-04-2016 AMC99_RS06060 8ab0d2145f9bad15c93704d06dc8a192 236 Pfam PF03099 Biotin/lipoate A/B protein ligase family 28 128 2.5E-6 T 20-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AMC99_RS06060 8ab0d2145f9bad15c93704d06dc8a192 236 SUPERFAMILY SSF55681 3 183 4.97E-36 T 20-04-2016 AMC99_RS06060 8ab0d2145f9bad15c93704d06dc8a192 236 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 3 235 3.2E-33 T 20-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 AMC99_RS11860 012ed9980fefb26e6cd27061e429d6ec 126 Gene3D G3DSA:1.10.10.10 15 84 6.4E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS11860 012ed9980fefb26e6cd27061e429d6ec 126 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 83 1.7E-14 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMC99_RS11860 012ed9980fefb26e6cd27061e429d6ec 126 SMART SM00345 24 83 8.9E-13 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMC99_RS11860 012ed9980fefb26e6cd27061e429d6ec 126 PANTHER PTHR38445:SF2 17 123 1.6E-18 T 20-04-2016 AMC99_RS11860 012ed9980fefb26e6cd27061e429d6ec 126 SUPERFAMILY SSF46785 17 94 1.72E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS11860 012ed9980fefb26e6cd27061e429d6ec 126 PANTHER PTHR38445 17 123 1.6E-18 T 20-04-2016 AMC99_RS01870 aa213377ef5f454487833ceb9f422b6e 102 Gene3D G3DSA:1.10.10.10 3 94 1.7E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01870 aa213377ef5f454487833ceb9f422b6e 102 PANTHER PTHR37318 1 97 1.8E-21 T 20-04-2016 AMC99_RS01870 aa213377ef5f454487833ceb9f422b6e 102 SUPERFAMILY SSF46785 4 93 7.8E-14 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01870 aa213377ef5f454487833ceb9f422b6e 102 Pfam PF13601 Winged helix DNA-binding domain 14 92 6.0E-24 T 20-04-2016 IPR027395 Winged helix DNA-binding domain AMC99_RS07130 e20b27c7e84d5e26ffe11996d298e873 526 SUPERFAMILY SSF56317 215 486 1.7E-55 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMC99_RS07130 e20b27c7e84d5e26ffe11996d298e873 526 SUPERFAMILY SSF55729 3 135 3.43E-14 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS07130 e20b27c7e84d5e26ffe11996d298e873 526 PANTHER PTHR23088:SF12 201 503 1.4E-122 T 20-04-2016 AMC99_RS07130 e20b27c7e84d5e26ffe11996d298e873 526 PANTHER PTHR23088 201 503 1.4E-122 T 20-04-2016 AMC99_RS07130 e20b27c7e84d5e26ffe11996d298e873 526 Pfam PF00795 Carbon-nitrogen hydrolase 218 477 3.0E-31 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMC99_RS07130 e20b27c7e84d5e26ffe11996d298e873 526 Gene3D G3DSA:3.60.110.10 215 500 2.4E-57 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMC99_RS07130 e20b27c7e84d5e26ffe11996d298e873 526 Pfam PF00583 Acetyltransferase (GNAT) family 43 124 2.6E-4 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS07130 e20b27c7e84d5e26ffe11996d298e873 526 Gene3D G3DSA:3.40.630.30 3 193 1.8E-17 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS10675 706416a5f98c52297f43a4c84b559b13 133 Pfam PF11162 Protein of unknown function (DUF2946) 13 130 3.1E-5 T 20-04-2016 IPR021333 Protein of unknown function DUF2946 AMC99_RS10605 45e4603d925d4b0e9bd6c88c99a1f86f 367 Gene3D G3DSA:3.10.180.10 160 362 2.8E-64 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS10605 45e4603d925d4b0e9bd6c88c99a1f86f 367 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 164 279 1.0E-15 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_RS10605 45e4603d925d4b0e9bd6c88c99a1f86f 367 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 147 1.2E-67 T 20-04-2016 AMC99_RS10605 45e4603d925d4b0e9bd6c88c99a1f86f 367 Gene3D G3DSA:3.10.180.10 6 149 3.8E-43 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS10605 45e4603d925d4b0e9bd6c88c99a1f86f 367 PIRSF PIRSF009283 2 360 9.4E-107 T 20-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AMC99_RS10605 45e4603d925d4b0e9bd6c88c99a1f86f 367 PANTHER PTHR11959 7 367 1.3E-103 T 20-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AMC99_RS10605 45e4603d925d4b0e9bd6c88c99a1f86f 367 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 13 359 3.8E-111 T 20-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AMC99_RS10605 45e4603d925d4b0e9bd6c88c99a1f86f 367 PANTHER PTHR11959:SF1 7 367 1.3E-103 T 20-04-2016 AMC99_RS10605 45e4603d925d4b0e9bd6c88c99a1f86f 367 SUPERFAMILY SSF54593 6 346 8.27E-77 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS13720 2e52a1f99ddf5060d3794ce747252e6a 336 Pfam PF00850 Histone deacetylase domain 54 331 8.3E-65 T 20-04-2016 IPR023801 Histone deacetylase domain AMC99_RS13720 2e52a1f99ddf5060d3794ce747252e6a 336 PANTHER PTHR10625:SF121 53 70 4.0E-82 T 20-04-2016 AMC99_RS13720 2e52a1f99ddf5060d3794ce747252e6a 336 PANTHER PTHR10625:SF121 94 328 4.0E-82 T 20-04-2016 AMC99_RS13720 2e52a1f99ddf5060d3794ce747252e6a 336 SUPERFAMILY SSF52768 2 334 1.44E-84 T 20-04-2016 AMC99_RS13720 2e52a1f99ddf5060d3794ce747252e6a 336 PRINTS PR01270 Histone deacetylase superfamily signature 183 198 6.7E-13 T 20-04-2016 IPR000286 Histone deacetylase superfamily AMC99_RS13720 2e52a1f99ddf5060d3794ce747252e6a 336 PRINTS PR01270 Histone deacetylase superfamily signature 269 279 6.7E-13 T 20-04-2016 IPR000286 Histone deacetylase superfamily AMC99_RS13720 2e52a1f99ddf5060d3794ce747252e6a 336 PRINTS PR01270 Histone deacetylase superfamily signature 150 173 6.7E-13 T 20-04-2016 IPR000286 Histone deacetylase superfamily AMC99_RS13720 2e52a1f99ddf5060d3794ce747252e6a 336 PANTHER PTHR10625 53 70 4.0E-82 T 20-04-2016 IPR000286 Histone deacetylase superfamily AMC99_RS13720 2e52a1f99ddf5060d3794ce747252e6a 336 PANTHER PTHR10625 94 328 4.0E-82 T 20-04-2016 IPR000286 Histone deacetylase superfamily AMC99_RS13720 2e52a1f99ddf5060d3794ce747252e6a 336 Gene3D G3DSA:3.40.800.20 28 333 1.4E-74 T 20-04-2016 IPR023801 Histone deacetylase domain AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 492 4.3E-295 T 20-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 435 1.4E-27 T 20-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 SUPERFAMILY SSF54862 1 493 1.05E-176 T 20-04-2016 AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 Gene3D G3DSA:3.30.70.20 196 235 1.3E-24 T 20-04-2016 AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 Pfam PF13247 4Fe-4S dicluster domain 175 271 3.3E-38 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 Gene3D G3DSA:1.10.3650.10 359 434 5.2E-28 T 20-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 Gene3D G3DSA:3.30.70.20 236 358 2.2E-75 T 20-04-2016 AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 Gene3D G3DSA:3.30.70.20 436 465 2.2E-75 T 20-04-2016 AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 Gene3D G3DSA:3.30.70.20 107 108 5.6E-12 T 20-04-2016 AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 Gene3D G3DSA:3.30.70.20 11 26 5.6E-12 T 20-04-2016 AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 Gene3D G3DSA:3.30.70.20 174 195 5.6E-12 T 20-04-2016 AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 PANTHER PTHR11938:SF8 1 31 5.0E-128 T 20-04-2016 AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 PANTHER PTHR11938:SF8 170 336 5.0E-128 T 20-04-2016 AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 PANTHER PTHR11938:SF8 134 143 5.0E-128 T 20-04-2016 AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 PANTHER PTHR11938 1 31 5.0E-128 T 20-04-2016 AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 PANTHER PTHR11938 170 336 5.0E-128 T 20-04-2016 AMC99_RS00655 82c5197633c2d3f2b55d5676a1ba5f8a 509 PANTHER PTHR11938 134 143 5.0E-128 T 20-04-2016 AMC99_RS12715 eee9ee9423d01d3f13ae481a7afd253b 369 PANTHER PTHR12526 283 364 1.8E-17 T 20-04-2016 AMC99_RS12715 eee9ee9423d01d3f13ae481a7afd253b 369 PANTHER PTHR12526 4 265 1.8E-17 T 20-04-2016 AMC99_RS12715 eee9ee9423d01d3f13ae481a7afd253b 369 Pfam PF00534 Glycosyl transferases group 1 283 340 4.8E-8 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 AMC99_RS12715 eee9ee9423d01d3f13ae481a7afd253b 369 SUPERFAMILY SSF53756 26 364 9.42E-29 T 20-04-2016 AMC99_RS00365 9fcd06dd9a17055e7ac21b3c2198f554 847 PANTHER PTHR38467 384 843 3.5E-19 T 20-04-2016 AMC99_RS00365 9fcd06dd9a17055e7ac21b3c2198f554 847 SUPERFAMILY SSF52540 430 819 1.76E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00365 9fcd06dd9a17055e7ac21b3c2198f554 847 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 33 279 4.0E-52 T 20-04-2016 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase AMC99_RS00365 9fcd06dd9a17055e7ac21b3c2198f554 847 Gene3D G3DSA:3.40.50.300 645 762 4.6E-19 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00365 9fcd06dd9a17055e7ac21b3c2198f554 847 Gene3D G3DSA:3.40.50.300 461 551 4.6E-19 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00365 9fcd06dd9a17055e7ac21b3c2198f554 847 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 38 843 1.3E-183 T 20-04-2016 IPR014117 Type-IV secretion system protein TraC AMC99_RS00365 9fcd06dd9a17055e7ac21b3c2198f554 847 Pfam PF12846 AAA-like domain 478 738 1.9E-12 T 20-04-2016 AMC99_RS00365 9fcd06dd9a17055e7ac21b3c2198f554 847 SMART SM00382 477 775 2.5E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS02585 3f5683f4636c58d054d60592c4ff4a05 294 Gene3D G3DSA:2.60.120.650 14 244 1.5E-17 T 20-04-2016 AMC99_RS02585 3f5683f4636c58d054d60592c4ff4a05 294 SUPERFAMILY SSF51197 24 288 3.71E-28 T 20-04-2016 AMC99_RS02585 3f5683f4636c58d054d60592c4ff4a05 294 SMART SM00558 95 258 8.1E-4 T 20-04-2016 IPR003347 JmjC domain AMC99_RS08825 73c3813b4f233ef9ff63c346c6da7558 360 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 20 26 - T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMC99_RS10525 72874820e3cb53ec4ac16baa9da67c63 442 PANTHER PTHR30203 6 439 7.5E-92 T 20-04-2016 AMC99_RS10525 72874820e3cb53ec4ac16baa9da67c63 442 SUPERFAMILY SSF56954 9 438 5.49E-83 T 20-04-2016 AMC99_RS10525 72874820e3cb53ec4ac16baa9da67c63 442 PANTHER PTHR30203:SF3 6 439 7.5E-92 T 20-04-2016 AMC99_RS10525 72874820e3cb53ec4ac16baa9da67c63 442 Pfam PF02321 Outer membrane efflux protein 21 222 2.1E-26 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMC99_RS10525 72874820e3cb53ec4ac16baa9da67c63 442 Pfam PF02321 Outer membrane efflux protein 253 432 2.2E-21 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMC99_RS10525 72874820e3cb53ec4ac16baa9da67c63 442 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 3 434 4.1E-82 T 20-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AMC99_RS10525 72874820e3cb53ec4ac16baa9da67c63 442 Gene3D G3DSA:1.20.1600.10 7 438 1.0E-89 T 20-04-2016 AMC99_RS10205 b36ecc4a7c1978214bd5cca568f08455 525 SUPERFAMILY SSF48452 299 488 3.1E-17 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS10205 b36ecc4a7c1978214bd5cca568f08455 525 Gene3D G3DSA:1.25.40.10 297 485 1.2E-18 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS10205 b36ecc4a7c1978214bd5cca568f08455 525 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 100 1.2E-9 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS10205 b36ecc4a7c1978214bd5cca568f08455 525 SMART SM00862 25 100 9.1E-6 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS10205 b36ecc4a7c1978214bd5cca568f08455 525 SUPERFAMILY SSF46894 8 100 2.24E-14 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_RS10205 b36ecc4a7c1978214bd5cca568f08455 525 Gene3D G3DSA:1.10.10.10 8 102 7.3E-13 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS04325 2625fe83a99b216b9b86088cfe2f3564 407 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 145 394 4.2E-37 T 20-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal AMC99_RS04325 2625fe83a99b216b9b86088cfe2f3564 407 SUPERFAMILY SSF51735 7 156 5.92E-14 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS04325 2625fe83a99b216b9b86088cfe2f3564 407 PANTHER PTHR12286:SF6 1 407 4.2E-147 T 20-04-2016 AMC99_RS04325 2625fe83a99b216b9b86088cfe2f3564 407 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 8 141 6.3E-34 T 20-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AMC99_RS04325 2625fe83a99b216b9b86088cfe2f3564 407 PANTHER PTHR12286 1 407 4.2E-147 T 20-04-2016 AMC99_RS04325 2625fe83a99b216b9b86088cfe2f3564 407 Gene3D G3DSA:3.40.50.720 7 199 4.8E-28 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12770 4cea1fe34dc449688ddee61478266f4f 720 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 520 696 4.5E-14 T 20-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMC99_RS12770 4cea1fe34dc449688ddee61478266f4f 720 PANTHER PTHR32309 27 715 7.6E-125 T 20-04-2016 AMC99_RS12770 4cea1fe34dc449688ddee61478266f4f 720 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 499 705 1.8E-40 T 20-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AMC99_RS12770 4cea1fe34dc449688ddee61478266f4f 720 Pfam PF13807 G-rich domain on putative tyrosine kinase 381 453 6.0E-12 T 20-04-2016 IPR032807 Tyrosine kinase, G-rich domain AMC99_RS12770 4cea1fe34dc449688ddee61478266f4f 720 SUPERFAMILY SSF52540 518 699 3.72E-35 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12770 4cea1fe34dc449688ddee61478266f4f 720 Gene3D G3DSA:3.40.50.300 518 697 4.3E-32 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12770 4cea1fe34dc449688ddee61478266f4f 720 PANTHER PTHR32309:SF13 27 715 7.6E-125 T 20-04-2016 AMC99_RS12770 4cea1fe34dc449688ddee61478266f4f 720 Pfam PF02706 Chain length determinant protein 32 183 2.6E-10 T 20-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 PANTHER PTHR11482 45 381 2.0E-75 T 20-04-2016 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 Gene3D G3DSA:3.20.20.10 35 251 1.1E-46 T 20-04-2016 IPR029066 PLP-binding barrel AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 283 374 4.1E-16 T 20-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 PANTHER PTHR11482:SF6 45 381 2.0E-75 T 20-04-2016 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 SUPERFAMILY SSF51419 18 268 5.89E-48 T 20-04-2016 IPR029066 PLP-binding barrel AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01182 Ornithine decarboxylase signature 43 70 8.4E-5 T 20-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01182 Ornithine decarboxylase signature 321 331 8.4E-5 T 20-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01182 Ornithine decarboxylase signature 342 355 8.4E-5 T 20-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01182 Ornithine decarboxylase signature 288 301 8.4E-5 T 20-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 Gene3D G3DSA:2.40.37.10 252 385 3.4E-26 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 32 267 7.8E-37 T 20-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 208 224 - T 20-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 45 63 - T 20-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 257 276 5.9E-20 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 66 78 5.9E-20 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 45 63 5.9E-20 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 355 368 5.9E-20 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 176 189 5.9E-20 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMC99_RS04345 f728752a7330ea62127d1e572b4de6b0 401 SUPERFAMILY SSF50621 228 384 4.4E-32 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMC99_RS10855 780360f2acb497fae91938c639a5c130 109 Pfam PF00072 Response regulator receiver domain 1 102 5.5E-6 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS10855 780360f2acb497fae91938c639a5c130 109 SUPERFAMILY SSF52172 1 109 6.26E-15 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS10855 780360f2acb497fae91938c639a5c130 109 Gene3D G3DSA:3.40.50.2300 1 108 5.6E-14 T 20-04-2016 AMC99_RS12935 2d5075fafbad3b070fe1a890cf99ddf7 160 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 32.348 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMC99_RS12935 2d5075fafbad3b070fe1a890cf99ddf7 160 SUPERFAMILY SSF52255 4 156 8.24E-66 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMC99_RS12935 2d5075fafbad3b070fe1a890cf99ddf7 160 SMART SM01001 3 154 4.1E-101 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMC99_RS12935 2d5075fafbad3b070fe1a890cf99ddf7 160 Gene3D G3DSA:3.40.50.7700 4 157 1.1E-73 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMC99_RS12935 2d5075fafbad3b070fe1a890cf99ddf7 160 Pfam PF00731 AIR carboxylase 4 150 7.1E-65 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMC99_RS12935 2d5075fafbad3b070fe1a890cf99ddf7 160 PANTHER PTHR23046:SF2 1 158 2.0E-82 T 20-04-2016 AMC99_RS12935 2d5075fafbad3b070fe1a890cf99ddf7 160 PIRSF PIRSF001338 1 159 1.1E-67 T 20-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 AMC99_RS12935 2d5075fafbad3b070fe1a890cf99ddf7 160 PANTHER PTHR23046 1 158 2.0E-82 T 20-04-2016 AMC99_RS12935 2d5075fafbad3b070fe1a890cf99ddf7 160 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 156 2.2E-65 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMC99_RS09745 be5da71e253c2e50f2a23677b77a16ba 65 Gene3D G3DSA:3.20.20.370 8 62 3.4E-10 T 20-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_RS09745 be5da71e253c2e50f2a23677b77a16ba 65 SUPERFAMILY SSF88713 12 61 1.67E-9 T 20-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_RS13260 75274fb599d98970043aed15c92b943b 395 Gene3D G3DSA:3.90.1150.10 16 49 1.3E-28 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS13260 75274fb599d98970043aed15c92b943b 395 Gene3D G3DSA:3.90.1150.10 296 384 1.3E-28 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS13260 75274fb599d98970043aed15c92b943b 395 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 212 249 - T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMC99_RS13260 75274fb599d98970043aed15c92b943b 395 Gene3D G3DSA:3.40.640.10 50 292 2.0E-82 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS13260 75274fb599d98970043aed15c92b943b 395 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 7 384 3.5E-137 T 20-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AMC99_RS13260 75274fb599d98970043aed15c92b943b 395 PANTHER PTHR11986:SF79 10 395 3.1E-163 T 20-04-2016 AMC99_RS13260 75274fb599d98970043aed15c92b943b 395 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 3 388 42.011 T 20-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AMC99_RS13260 75274fb599d98970043aed15c92b943b 395 Pfam PF00202 Aminotransferase class-III 17 384 6.9E-114 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMC99_RS13260 75274fb599d98970043aed15c92b943b 395 SUPERFAMILY SSF53383 5 384 2.09E-118 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS13260 75274fb599d98970043aed15c92b943b 395 PANTHER PTHR11986 10 395 3.1E-163 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMC99_RS12470 002598dfadb6d652672ba11bf2dfa267 920 Gene3D G3DSA:2.60.40.10 820 867 2.1E-5 T 20-04-2016 IPR013783 Immunoglobulin-like fold AMC99_RS12470 002598dfadb6d652672ba11bf2dfa267 920 SUPERFAMILY SSF49478 808 875 1.06E-7 T 20-04-2016 AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 Gene3D G3DSA:1.10.8.60 323 392 5.9E-21 T 20-04-2016 AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 236 251 - T 20-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 Pfam PF00072 Response regulator receiver domain 9 117 5.6E-14 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 PANTHER PTHR32071 8 454 2.0E-166 T 20-04-2016 AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 363 372 - T 20-04-2016 IPR025944 Sigma-54 interaction domain, conserved site AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 Pfam PF02954 Bacterial regulatory protein, Fis family 410 450 5.3E-12 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 Pfam PF00158 Sigma-54 interaction domain 151 315 1.7E-68 T 20-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 TIGRFAM TIGR02915 PEP_resp_reg: PEP-CTERM-box response regulator transcription factor 8 452 3.0E-203 T 20-04-2016 IPR014264 Signal transduction response regulator, PEP-CTERM system, putative AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 416 433 1.1E-8 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 453 1.1E-8 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 SMART SM00382 170 313 1.4E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 SUPERFAMILY SSF46689 363 452 6.05E-16 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 SUPERFAMILY SSF52540 154 391 5.45E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 Gene3D G3DSA:3.40.50.300 149 321 3.9E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 SMART SM00448 6 120 1.8E-11 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 Gene3D G3DSA:3.40.50.2300 5 136 2.4E-23 T 20-04-2016 AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 Gene3D G3DSA:1.10.10.60 396 452 2.5E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS04880 4e2410127f3ce4ca8260959f69062401 454 SUPERFAMILY SSF52172 6 194 3.7E-28 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS00735 405155832fcceaa3b6d5c9c9e1faa006 157 PANTHER PTHR10361 93 150 9.4E-22 T 20-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AMC99_RS00735 405155832fcceaa3b6d5c9c9e1faa006 157 PANTHER PTHR10361:SF31 93 150 9.4E-22 T 20-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AMC99_RS03940 26042e28862a8774cc2aa4018a80c1c8 246 SUPERFAMILY SSF103088 112 228 3.4E-22 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS03940 26042e28862a8774cc2aa4018a80c1c8 246 PANTHER PTHR30128 103 212 1.9E-21 T 20-04-2016 AMC99_RS03940 26042e28862a8774cc2aa4018a80c1c8 246 Pfam PF00691 OmpA family 131 213 2.4E-16 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS03940 26042e28862a8774cc2aa4018a80c1c8 246 Gene3D G3DSA:3.30.1330.60 118 229 1.5E-24 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS03940 26042e28862a8774cc2aa4018a80c1c8 246 PRINTS PR01021 OMPA domain signature 176 192 1.3E-8 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_RS03940 26042e28862a8774cc2aa4018a80c1c8 246 PRINTS PR01021 OMPA domain signature 131 153 1.3E-8 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_RS03940 26042e28862a8774cc2aa4018a80c1c8 246 PRINTS PR01021 OMPA domain signature 161 176 1.3E-8 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_RS05030 683256eff8d2df598081b7997ea042bd 562 PANTHER PTHR10166 129 235 9.4E-19 T 20-04-2016 AMC99_RS05030 683256eff8d2df598081b7997ea042bd 562 SMART SM00327 125 296 6.3E-12 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS05030 683256eff8d2df598081b7997ea042bd 562 SUPERFAMILY SSF53300 129 281 2.36E-25 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS05030 683256eff8d2df598081b7997ea042bd 562 Pfam PF00092 von Willebrand factor type A domain 129 281 6.9E-14 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS05030 683256eff8d2df598081b7997ea042bd 562 Gene3D G3DSA:3.40.50.410 129 293 3.4E-15 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS13480 dd98938d4af851b4c1441632615087fe 456 PANTHER PTHR11699:SF28 2 452 1.5E-207 T 20-04-2016 AMC99_RS13480 dd98938d4af851b4c1441632615087fe 456 Gene3D G3DSA:3.40.309.10 242 426 5.8E-57 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMC99_RS13480 dd98938d4af851b4c1441632615087fe 456 SUPERFAMILY SSF53720 2 454 3.01E-132 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMC99_RS13480 dd98938d4af851b4c1441632615087fe 456 PANTHER PTHR11699 2 452 1.5E-207 T 20-04-2016 AMC99_RS13480 dd98938d4af851b4c1441632615087fe 456 Gene3D G3DSA:3.40.605.10 2 241 5.3E-62 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS13480 dd98938d4af851b4c1441632615087fe 456 Pfam PF00171 Aldehyde dehydrogenase family 3 451 5.9E-123 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS00785 807de43ac4e66e45e3e2581692bd8bca 276 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 24 252 8.6E-53 T 20-04-2016 IPR003786 Protein FdhD GO:0016783 AMC99_RS00785 807de43ac4e66e45e3e2581692bd8bca 276 PANTHER PTHR30592 10 253 4.4E-76 T 20-04-2016 AMC99_RS00785 807de43ac4e66e45e3e2581692bd8bca 276 Hamap MF_00187 Protein FdhD [fdhD]. 1 263 28.385 T 20-04-2016 IPR003786 Protein FdhD GO:0016783 AMC99_RS00785 807de43ac4e66e45e3e2581692bd8bca 276 Pfam PF02634 FdhD/NarQ family 26 253 1.4E-65 T 20-04-2016 IPR003786 Protein FdhD GO:0016783 AMC99_RS00785 807de43ac4e66e45e3e2581692bd8bca 276 Gene3D G3DSA:3.40.140.10 128 254 3.6E-43 T 20-04-2016 AMC99_RS00785 807de43ac4e66e45e3e2581692bd8bca 276 PANTHER PTHR30592:SF1 10 253 4.4E-76 T 20-04-2016 AMC99_RS00785 807de43ac4e66e45e3e2581692bd8bca 276 SUPERFAMILY SSF53927 14 254 2.65E-66 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMC99_RS00785 807de43ac4e66e45e3e2581692bd8bca 276 PIRSF PIRSF015626 9 259 2.2E-67 T 20-04-2016 IPR003786 Protein FdhD GO:0016783 AMC99_RS00785 807de43ac4e66e45e3e2581692bd8bca 276 Gene3D G3DSA:3.10.20.10 28 112 1.7E-19 T 20-04-2016 AMC99_RS10555 badfc167a6068cbb69628cf240afbde7 600 PANTHER PTHR37292:SF2 6 586 1.2E-106 T 20-04-2016 AMC99_RS10555 badfc167a6068cbb69628cf240afbde7 600 Pfam PF03235 Protein of unknown function DUF262 9 243 3.0E-25 T 20-04-2016 IPR004919 Domain of unknown function DUF262 AMC99_RS10555 badfc167a6068cbb69628cf240afbde7 600 PANTHER PTHR37292 6 586 1.2E-106 T 20-04-2016 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 15 1374 0.0 T 20-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:2.30.150.10 605 669 2.1E-27 T 20-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Pfam PF10385 RNA polymerase beta subunit external 1 domain 604 669 2.1E-24 T 20-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1088 1100 - T 20-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 SUPERFAMILY SSF64484 1064 1161 0.0 T 20-04-2016 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 SUPERFAMILY SSF64484 356 951 0.0 T 20-04-2016 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 SUPERFAMILY SSF64484 1196 1376 0.0 T 20-04-2016 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 SUPERFAMILY SSF64484 18 237 0.0 T 20-04-2016 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:3.90.1100.10 26 162 5.1E-147 T 20-04-2016 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:3.90.1100.10 458 604 5.1E-147 T 20-04-2016 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:3.90.1100.10 672 726 5.1E-147 T 20-04-2016 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:2.40.50.150 1070 1084 1.2E-57 T 20-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:2.40.50.150 839 949 1.2E-57 T 20-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 PANTHER PTHR20856 1059 1153 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 PANTHER PTHR20856 353 738 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 PANTHER PTHR20856 13 242 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 PANTHER PTHR20856 1217 1381 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 PANTHER PTHR20856 755 942 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 20 1377 12.397 T 20-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 PANTHER PTHR20856:SF20 1059 1153 0.0 T 20-04-2016 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 PANTHER PTHR20856:SF20 353 738 0.0 T 20-04-2016 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 PANTHER PTHR20856:SF20 13 242 0.0 T 20-04-2016 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 PANTHER PTHR20856:SF20 1217 1381 0.0 T 20-04-2016 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 PANTHER PTHR20856:SF20 755 942 0.0 T 20-04-2016 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Pfam PF04563 RNA polymerase beta subunit 34 510 4.7E-35 T 20-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Pfam PF04560 RNA polymerase Rpb2, domain 7 1301 1375 1.2E-26 T 20-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Pfam PF04565 RNA polymerase Rpb2, domain 3 526 594 3.0E-31 T 20-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:2.40.50.100 728 804 1.0E-28 T 20-04-2016 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Pfam PF04561 RNA polymerase Rpb2, domain 2 369 467 5.3E-18 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Pfam PF04561 RNA polymerase Rpb2, domain 2 182 233 7.9E-5 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Pfam PF00562 RNA polymerase Rpb2, domain 6 731 1299 2.2E-164 T 20-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:3.90.1110.10 359 457 1.5E-67 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:3.90.1110.10 164 241 1.5E-67 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:2.40.270.10 1085 1277 4.0E-85 T 20-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13690 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:2.40.270.10 805 832 4.0E-85 T 20-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS08230 02fbda3ea276921184d9d7bdf462ad30 188 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 5 161 22.073 T 20-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 AMC99_RS08230 02fbda3ea276921184d9d7bdf462ad30 188 Pfam PF02576 Putative ribosome maturation factor RimP 11 157 1.9E-34 T 20-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 AMC99_RS08230 02fbda3ea276921184d9d7bdf462ad30 188 SUPERFAMILY SSF74942 93 162 2.35E-16 T 20-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal AMC99_RS08230 02fbda3ea276921184d9d7bdf462ad30 188 Gene3D G3DSA:3.30.300.70 5 89 2.3E-15 T 20-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal AMC99_RS08230 02fbda3ea276921184d9d7bdf462ad30 188 Gene3D G3DSA:2.30.30.180 97 158 2.5E-13 T 20-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal AMC99_RS08230 02fbda3ea276921184d9d7bdf462ad30 188 PANTHER PTHR33867:SF1 1 185 4.0E-27 T 20-04-2016 AMC99_RS08230 02fbda3ea276921184d9d7bdf462ad30 188 PANTHER PTHR33867 1 185 4.0E-27 T 20-04-2016 AMC99_RS08230 02fbda3ea276921184d9d7bdf462ad30 188 SUPERFAMILY SSF75420 4 92 1.19E-15 T 20-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal AMC99_RS04225 be6de5021722908a4f14697037f2ec09 401 Pfam PF13469 Sulfotransferase family 126 367 3.2E-25 T 20-04-2016 AMC99_RS04225 be6de5021722908a4f14697037f2ec09 401 PANTHER PTHR36451 81 386 3.1E-19 T 20-04-2016 AMC99_RS04225 be6de5021722908a4f14697037f2ec09 401 SUPERFAMILY SSF52540 121 195 2.73E-20 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04225 be6de5021722908a4f14697037f2ec09 401 SUPERFAMILY SSF52540 253 382 2.73E-20 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04225 be6de5021722908a4f14697037f2ec09 401 Gene3D G3DSA:3.40.50.300 121 190 2.9E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04225 be6de5021722908a4f14697037f2ec09 401 Gene3D G3DSA:3.40.50.300 254 376 2.9E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10465 d1d9f6543704f4942a9697b4bd0bd752 205 Gene3D G3DSA:2.40.30.20 107 201 1.4E-28 T 20-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS10465 d1d9f6543704f4942a9697b4bd0bd752 205 Gene3D G3DSA:2.40.30.20 5 106 9.7E-26 T 20-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS10465 d1d9f6543704f4942a9697b4bd0bd752 205 PANTHER PTHR21098 2 200 3.2E-76 T 20-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMC99_RS10465 d1d9f6543704f4942a9697b4bd0bd752 205 SUPERFAMILY SSF63380 96 201 1.28E-28 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AMC99_RS10465 d1d9f6543704f4942a9697b4bd0bd752 205 SUPERFAMILY SSF63380 2 95 4.85E-20 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AMC99_RS10465 d1d9f6543704f4942a9697b4bd0bd752 205 Pfam PF00677 Lumazine binding domain 102 191 8.6E-22 T 20-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMC99_RS10465 d1d9f6543704f4942a9697b4bd0bd752 205 Pfam PF00677 Lumazine binding domain 3 88 3.6E-18 T 20-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMC99_RS10465 d1d9f6543704f4942a9697b4bd0bd752 205 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 2 200 1.1E-49 T 20-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMC99_RS10465 d1d9f6543704f4942a9697b4bd0bd752 205 PIRSF PIRSF000498 1 204 3.1E-62 T 20-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMC99_RS04425 b3898b231f78482ef8fe0a03af860c71 223 SUPERFAMILY SSF69065 6 154 2.09E-38 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AMC99_RS04425 b3898b231f78482ef8fe0a03af860c71 223 Gene3D G3DSA:3.30.160.20 156 221 3.6E-22 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain AMC99_RS04425 b3898b231f78482ef8fe0a03af860c71 223 Hamap MF_00104 Ribonuclease 3 [rnc]. 11 219 24.692 T 20-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 AMC99_RS04425 b3898b231f78482ef8fe0a03af860c71 223 Gene3D G3DSA:1.10.1520.10 13 146 1.8E-37 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AMC99_RS04425 b3898b231f78482ef8fe0a03af860c71 223 PANTHER PTHR11207 28 221 4.9E-52 T 20-04-2016 AMC99_RS04425 b3898b231f78482ef8fe0a03af860c71 223 SMART SM00535 23 151 7.4E-36 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AMC99_RS04425 b3898b231f78482ef8fe0a03af860c71 223 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 13 221 6.4E-63 T 20-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 AMC99_RS04425 b3898b231f78482ef8fe0a03af860c71 223 Pfam PF14622 Ribonuclease-III-like 22 145 2.3E-30 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AMC99_RS04425 b3898b231f78482ef8fe0a03af860c71 223 ProSitePatterns PS00517 Ribonuclease III family signature. 41 49 - T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AMC99_RS04425 b3898b231f78482ef8fe0a03af860c71 223 SMART SM00358 156 223 1.9E-19 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain AMC99_RS04425 b3898b231f78482ef8fe0a03af860c71 223 SUPERFAMILY SSF54768 111 222 1.73E-23 T 20-04-2016 AMC99_RS04425 b3898b231f78482ef8fe0a03af860c71 223 Pfam PF00035 Double-stranded RNA binding motif 156 221 9.2E-13 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain AMC99_RS10875 18de6c561f18ccacf75cd1f7d03547a4 283 PANTHER PTHR23088 1 282 5.9E-132 T 20-04-2016 AMC99_RS10875 18de6c561f18ccacf75cd1f7d03547a4 283 Gene3D G3DSA:3.60.110.10 1 280 1.2E-91 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMC99_RS10875 18de6c561f18ccacf75cd1f7d03547a4 283 SUPERFAMILY SSF56317 1 279 7.98E-82 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMC99_RS10875 18de6c561f18ccacf75cd1f7d03547a4 283 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 4 279 2.4E-133 T 20-04-2016 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43|UniPathway: UPA00534 AMC99_RS10875 18de6c561f18ccacf75cd1f7d03547a4 283 Pfam PF00795 Carbon-nitrogen hydrolase 5 261 3.1E-54 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMC99_RS10875 18de6c561f18ccacf75cd1f7d03547a4 283 PANTHER PTHR23088:SF11 1 282 5.9E-132 T 20-04-2016 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 12 320 3.5E-92 T 20-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 PANTHER PTHR11451 7 326 1.9E-88 T 20-04-2016 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 PANTHER PTHR11451 375 407 1.9E-88 T 20-04-2016 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 PANTHER PTHR11451 444 459 1.9E-88 T 20-04-2016 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 SUPERFAMILY SSF52374 12 314 1.5E-102 T 20-04-2016 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 18 29 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 12 472 6.6E-149 T 20-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 12 473 32.403 T 20-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 Gene3D G3DSA:3.90.800.10 77 190 2.0E-36 T 20-04-2016 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 PRINTS PR00987 Glutamyl-tRNA synthetase signature 15 27 2.0E-25 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 PRINTS PR00987 Glutamyl-tRNA synthetase signature 189 199 2.0E-25 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 57 2.0E-25 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 PRINTS PR00987 Glutamyl-tRNA synthetase signature 29 40 2.0E-25 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 PRINTS PR00987 Glutamyl-tRNA synthetase signature 205 213 2.0E-25 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 SUPERFAMILY SSF48163 315 470 4.05E-38 T 20-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 Gene3D G3DSA:1.10.10.350 377 472 9.7E-29 T 20-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 Gene3D G3DSA:3.40.50.620 191 245 2.5E-47 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 Gene3D G3DSA:3.40.50.620 11 76 2.5E-47 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 PANTHER PTHR11451:SF41 7 326 1.9E-88 T 20-04-2016 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 PANTHER PTHR11451:SF41 375 407 1.9E-88 T 20-04-2016 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 PANTHER PTHR11451:SF41 444 459 1.9E-88 T 20-04-2016 AMC99_RS06005 57c291bee9b9a0144c2b9064d4191170 477 Gene3D G3DSA:1.10.1160.10 248 330 2.7E-28 T 20-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 AMC99_RS09190 96ef8f36407a5c3cc4fa99f86bbc3b31 268 Pfam PF00106 short chain dehydrogenase 5 192 2.6E-42 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09190 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 8.8E-8 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09190 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.8E-8 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09190 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 8.8E-8 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09190 96ef8f36407a5c3cc4fa99f86bbc3b31 268 Gene3D G3DSA:3.40.50.720 4 240 3.7E-60 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09190 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 9.0E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09190 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.0E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09190 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 9.0E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09190 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 9.0E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09190 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 9.0E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09190 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PANTHER PTHR24322 9 137 7.1E-46 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09190 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PANTHER PTHR24322 153 185 7.1E-46 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09190 96ef8f36407a5c3cc4fa99f86bbc3b31 268 SUPERFAMILY SSF51735 4 262 4.11E-60 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS07535 87a102145cc0f19aeb77675c47d21168 102 Pfam PF00276 Ribosomal protein L23 13 98 1.1E-29 T 20-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07535 87a102145cc0f19aeb77675c47d21168 102 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 12 101 19.641 T 20-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07535 87a102145cc0f19aeb77675c47d21168 102 ProSitePatterns PS00050 Ribosomal protein L23 signature. 84 99 - T 20-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site AMC99_RS07535 87a102145cc0f19aeb77675c47d21168 102 PANTHER PTHR11620 11 102 2.8E-27 T 20-04-2016 AMC99_RS07535 87a102145cc0f19aeb77675c47d21168 102 SUPERFAMILY SSF54189 10 99 3.96E-31 T 20-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07535 87a102145cc0f19aeb77675c47d21168 102 Gene3D G3DSA:3.30.70.330 10 102 1.4E-33 T 20-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 AMC99_RS11800 36e8ea716daaf55fa6f62b0fda3f3ea9 386 PANTHER PTHR24023:SF593 77 359 5.0E-29 T 20-04-2016 AMC99_RS11800 36e8ea716daaf55fa6f62b0fda3f3ea9 386 PANTHER PTHR24023 77 359 5.0E-29 T 20-04-2016 AMC99_RS11800 36e8ea716daaf55fa6f62b0fda3f3ea9 386 SUPERFAMILY SSF89796 9 382 3.27E-109 T 20-04-2016 IPR023606 CoA-transferase family III domain AMC99_RS11800 36e8ea716daaf55fa6f62b0fda3f3ea9 386 Gene3D G3DSA:3.40.50.10540 313 383 2.3E-88 T 20-04-2016 IPR023606 CoA-transferase family III domain AMC99_RS11800 36e8ea716daaf55fa6f62b0fda3f3ea9 386 Gene3D G3DSA:3.40.50.10540 8 224 2.3E-88 T 20-04-2016 IPR023606 CoA-transferase family III domain AMC99_RS11800 36e8ea716daaf55fa6f62b0fda3f3ea9 386 Pfam PF02515 CoA-transferase family III 11 380 8.7E-100 T 20-04-2016 IPR003673 CoA-transferase family III GO:0003824 AMC99_RS11800 36e8ea716daaf55fa6f62b0fda3f3ea9 386 Gene3D G3DSA:3.30.1540.10 240 312 8.2E-19 T 20-04-2016 AMC99_RS04955 94b549facea74369e6e0ab85b696e8ef 230 SMART SM00448 4 117 1.3E-46 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS04955 94b549facea74369e6e0ab85b696e8ef 230 SUPERFAMILY SSF52172 3 127 9.11E-43 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS04955 94b549facea74369e6e0ab85b696e8ef 230 SUPERFAMILY SSF46894 128 227 8.34E-30 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_RS04955 94b549facea74369e6e0ab85b696e8ef 230 Gene3D G3DSA:3.40.50.2300 3 124 6.5E-43 T 20-04-2016 AMC99_RS04955 94b549facea74369e6e0ab85b696e8ef 230 PANTHER PTHR26402 4 229 1.3E-92 T 20-04-2016 AMC99_RS04955 94b549facea74369e6e0ab85b696e8ef 230 Pfam PF00072 Response regulator receiver domain 7 117 8.3E-31 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS04955 94b549facea74369e6e0ab85b696e8ef 230 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 226 6.3E-103 T 20-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AMC99_RS04955 94b549facea74369e6e0ab85b696e8ef 230 PANTHER PTHR26402:SF576 4 229 1.3E-92 T 20-04-2016 AMC99_RS04955 94b549facea74369e6e0ab85b696e8ef 230 SMART SM00862 151 226 3.1E-27 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS04955 94b549facea74369e6e0ab85b696e8ef 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 5.0E-25 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS04955 94b549facea74369e6e0ab85b696e8ef 230 Gene3D G3DSA:1.10.10.10 130 228 9.5E-33 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS13500 fddc63d23ea721a1dd79adc9c7b7d9f3 231 SMART SM00862 145 221 4.2E-19 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS13500 fddc63d23ea721a1dd79adc9c7b7d9f3 231 PANTHER PTHR26402:SF553 1 226 1.7E-110 T 20-04-2016 AMC99_RS13500 fddc63d23ea721a1dd79adc9c7b7d9f3 231 PANTHER PTHR26402 1 226 1.7E-110 T 20-04-2016 AMC99_RS13500 fddc63d23ea721a1dd79adc9c7b7d9f3 231 Pfam PF00072 Response regulator receiver domain 3 112 6.7E-27 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS13500 fddc63d23ea721a1dd79adc9c7b7d9f3 231 SUPERFAMILY SSF52172 1 174 5.27E-38 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS13500 fddc63d23ea721a1dd79adc9c7b7d9f3 231 Gene3D G3DSA:1.10.10.10 123 224 3.9E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS13500 fddc63d23ea721a1dd79adc9c7b7d9f3 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 4.4E-19 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS13500 fddc63d23ea721a1dd79adc9c7b7d9f3 231 SMART SM00448 1 112 2.9E-37 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS13500 fddc63d23ea721a1dd79adc9c7b7d9f3 231 Gene3D G3DSA:3.40.50.2300 1 122 7.7E-35 T 20-04-2016 AMC99_RS11575 bae76ec86d73fe6b263e695957f8b6a8 149 PANTHER PTHR13078 4 145 1.5E-36 T 20-04-2016 AMC99_RS11575 bae76ec86d73fe6b263e695957f8b6a8 149 Pfam PF01575 MaoC like domain 8 119 4.7E-26 T 20-04-2016 IPR002539 MaoC-like domain AMC99_RS11575 bae76ec86d73fe6b263e695957f8b6a8 149 Gene3D G3DSA:3.10.129.10 9 145 8.3E-34 T 20-04-2016 IPR029069 HotDog domain AMC99_RS11575 bae76ec86d73fe6b263e695957f8b6a8 149 SUPERFAMILY SSF54637 5 145 3.73E-36 T 20-04-2016 IPR029069 HotDog domain AMC99_RS08745 a3415584729929c303372217f3f0203e 327 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 9.3E-18 T 20-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AMC99_RS08745 a3415584729929c303372217f3f0203e 327 PRINTS PR00139 Asparaginase/glutaminase family signature 84 102 9.3E-18 T 20-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AMC99_RS08745 a3415584729929c303372217f3f0203e 327 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 9.3E-18 T 20-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AMC99_RS08745 a3415584729929c303372217f3f0203e 327 Gene3D G3DSA:3.40.50.1170 3 189 4.2E-52 T 20-04-2016 IPR027474 L-asparaginase, N-terminal AMC99_RS08745 a3415584729929c303372217f3f0203e 327 Pfam PF00710 Asparaginase, N-terminal 5 192 2.6E-44 T 20-04-2016 IPR027474 L-asparaginase, N-terminal AMC99_RS08745 a3415584729929c303372217f3f0203e 327 SMART SM00870 4 320 8.6E-100 T 20-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AMC99_RS08745 a3415584729929c303372217f3f0203e 327 PANTHER PTHR11707:SF29 4 315 6.1E-64 T 20-04-2016 AMC99_RS08745 a3415584729929c303372217f3f0203e 327 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 7 15 - T 20-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AMC99_RS08745 a3415584729929c303372217f3f0203e 327 PANTHER PTHR11707 4 315 6.1E-64 T 20-04-2016 AMC99_RS08745 a3415584729929c303372217f3f0203e 327 SUPERFAMILY SSF53774 4 325 8.77E-86 T 20-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AMC99_RS08745 a3415584729929c303372217f3f0203e 327 PIRSF PIRSF500176 1 327 1.6E-71 T 20-04-2016 AMC99_RS08745 a3415584729929c303372217f3f0203e 327 PIRSF PIRSF001220 1 327 1.3E-76 T 20-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AMC99_RS08745 a3415584729929c303372217f3f0203e 327 Gene3D G3DSA:3.40.50.40 213 325 4.0E-35 T 20-04-2016 IPR027473 L-asparaginase, C-terminal domain AMC99_RS09955 482c14894d225e80883ab13e776427eb 276 Pfam PF01171 PP-loop family 11 162 3.2E-42 T 20-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AMC99_RS09955 482c14894d225e80883ab13e776427eb 276 PANTHER PTHR11807 11 230 4.0E-45 T 20-04-2016 AMC99_RS09955 482c14894d225e80883ab13e776427eb 276 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 264 15.281 T 20-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMC99_RS09955 482c14894d225e80883ab13e776427eb 276 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 10 164 6.7E-41 T 20-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMC99_RS09955 482c14894d225e80883ab13e776427eb 276 Gene3D G3DSA:3.40.50.620 2 143 1.7E-12 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS09955 482c14894d225e80883ab13e776427eb 276 PANTHER PTHR11807:SF2 11 230 4.0E-45 T 20-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMC99_RS09955 482c14894d225e80883ab13e776427eb 276 SUPERFAMILY SSF52402 3 164 2.72E-40 T 20-04-2016 AMC99_RS13120 8b42db6b109d546479257ba3e067f662 311 Gene3D G3DSA:3.40.50.2020 1 155 4.8E-72 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like AMC99_RS13120 8b42db6b109d546479257ba3e067f662 311 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 1 311 48.931 T 20-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMC99_RS13120 8b42db6b109d546479257ba3e067f662 311 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 117 4.9E-48 T 20-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMC99_RS13120 8b42db6b109d546479257ba3e067f662 311 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 311 2.6E-114 T 20-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMC99_RS13120 8b42db6b109d546479257ba3e067f662 311 PANTHER PTHR10210:SF41 1 311 8.5E-176 T 20-04-2016 AMC99_RS13120 8b42db6b109d546479257ba3e067f662 311 SUPERFAMILY SSF53271 8 92 3.23E-5 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like AMC99_RS13120 8b42db6b109d546479257ba3e067f662 311 PANTHER PTHR10210 1 311 8.5E-176 T 20-04-2016 AMC99_RS13120 8b42db6b109d546479257ba3e067f662 311 SMART SM01400 1 117 4.0E-78 T 20-04-2016 AMC99_RS13120 8b42db6b109d546479257ba3e067f662 311 Pfam PF14572 Phosphoribosyl synthetase-associated domain 198 310 3.2E-26 T 20-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMC99_RS13120 8b42db6b109d546479257ba3e067f662 311 Gene3D G3DSA:3.40.50.2020 156 284 4.9E-47 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like AMC99_RS13120 8b42db6b109d546479257ba3e067f662 311 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 125 140 - T 20-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 AMC99_RS13120 8b42db6b109d546479257ba3e067f662 311 SUPERFAMILY SSF53271 66 301 2.09E-65 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like AMC99_RS02365 493638cc2c27e7a42243543a5927625c 434 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 391 2.9E-25 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS02365 493638cc2c27e7a42243543a5927625c 434 PANTHER PTHR10909 3 416 6.3E-148 T 20-04-2016 AMC99_RS02365 493638cc2c27e7a42243543a5927625c 434 Gene3D G3DSA:2.40.110.10 132 231 4.3E-38 T 20-04-2016 AMC99_RS02365 493638cc2c27e7a42243543a5927625c 434 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 229 1.3E-23 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS02365 493638cc2c27e7a42243543a5927625c 434 Gene3D G3DSA:1.10.540.10 4 130 2.6E-24 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS02365 493638cc2c27e7a42243543a5927625c 434 PANTHER PTHR10909:SF195 3 416 6.3E-148 T 20-04-2016 AMC99_RS02365 493638cc2c27e7a42243543a5927625c 434 SUPERFAMILY SSF47203 239 397 1.22E-32 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS02365 493638cc2c27e7a42243543a5927625c 434 SUPERFAMILY SSF56645 3 254 7.59E-68 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS02365 493638cc2c27e7a42243543a5927625c 434 Gene3D G3DSA:1.20.140.10 232 398 2.8E-37 T 20-04-2016 AMC99_RS02365 493638cc2c27e7a42243543a5927625c 434 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 129 4.1E-14 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS05020 d3b9022669da333e0b2c8b70e65e8b19 329 PANTHER PTHR32332:SF21 2 327 7.1E-155 T 20-04-2016 AMC99_RS05020 d3b9022669da333e0b2c8b70e65e8b19 329 SUPERFAMILY SSF51412 9 304 7.69E-56 T 20-04-2016 AMC99_RS05020 d3b9022669da333e0b2c8b70e65e8b19 329 Pfam PF03060 Nitronate monooxygenase 76 249 8.2E-11 T 20-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMC99_RS05020 d3b9022669da333e0b2c8b70e65e8b19 329 PANTHER PTHR32332 2 327 7.1E-155 T 20-04-2016 AMC99_RS05020 d3b9022669da333e0b2c8b70e65e8b19 329 Gene3D G3DSA:3.20.20.70 9 303 5.0E-38 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS00300 da591f307b0a44fb13c67824627cf63b 432 PANTHER PTHR37419:SF2 38 350 2.4E-12 T 20-04-2016 AMC99_RS00300 da591f307b0a44fb13c67824627cf63b 432 Pfam PF07805 HipA-like N-terminal domain 170 263 2.3E-16 T 20-04-2016 IPR012894 HipA, N-terminal subdomain 2 AMC99_RS00300 da591f307b0a44fb13c67824627cf63b 432 Pfam PF13657 HipA N-terminal domain 6 115 2.3E-25 T 20-04-2016 IPR017508 HipA, N-terminal subdomain 1 AMC99_RS00300 da591f307b0a44fb13c67824627cf63b 432 Pfam PF07804 HipA-like C-terminal domain 269 409 9.4E-29 T 20-04-2016 IPR012893 HipA-like, C-terminal AMC99_RS00300 da591f307b0a44fb13c67824627cf63b 432 PANTHER PTHR37419 38 350 2.4E-12 T 20-04-2016 AMC99_RS05725 beae02cb70df8ce83067d37819fb6331 327 Pfam PF03330 Lytic transglycolase 80 140 2.0E-7 T 20-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMC99_RS05725 beae02cb70df8ce83067d37819fb6331 327 Gene3D G3DSA:3.30.70.1070 254 323 4.4E-13 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMC99_RS05725 beae02cb70df8ce83067d37819fb6331 327 PANTHER PTHR34183:SF1 81 208 5.3E-21 T 20-04-2016 AMC99_RS05725 beae02cb70df8ce83067d37819fb6331 327 PANTHER PTHR34183:SF1 255 327 5.3E-21 T 20-04-2016 AMC99_RS05725 beae02cb70df8ce83067d37819fb6331 327 PANTHER PTHR34183 81 208 5.3E-21 T 20-04-2016 AMC99_RS05725 beae02cb70df8ce83067d37819fb6331 327 Pfam PF05036 Sporulation related domain 259 321 2.4E-13 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMC99_RS05725 beae02cb70df8ce83067d37819fb6331 327 PANTHER PTHR34183 255 327 5.3E-21 T 20-04-2016 AMC99_RS05725 beae02cb70df8ce83067d37819fb6331 327 SUPERFAMILY SSF110997 259 324 9.29E-14 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMC99_RS10100 e014cfbb00c75466cac67a046ece462c 281 SUPERFAMILY SSF47757 2 70 1.02E-6 T 20-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMC99_RS10100 e014cfbb00c75466cac67a046ece462c 281 Gene3D G3DSA:1.10.155.10 2 70 2.2E-4 T 20-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMC99_RS10100 e014cfbb00c75466cac67a046ece462c 281 Gene3D G3DSA:3.40.50.150 73 262 1.5E-57 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10100 e014cfbb00c75466cac67a046ece462c 281 SMART SM00138 5 269 7.0E-70 T 20-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_RS10100 e014cfbb00c75466cac67a046ece462c 281 SUPERFAMILY SSF53335 73 261 4.27E-46 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10100 e014cfbb00c75466cac67a046ece462c 281 PANTHER PTHR24422 1 260 7.3E-59 T 20-04-2016 AMC99_RS10100 e014cfbb00c75466cac67a046ece462c 281 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.2E-28 T 20-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_RS10100 e014cfbb00c75466cac67a046ece462c 281 PRINTS PR00996 Glutamate methyltransferase family signature 66 78 1.2E-28 T 20-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_RS10100 e014cfbb00c75466cac67a046ece462c 281 PRINTS PR00996 Glutamate methyltransferase family signature 228 251 1.2E-28 T 20-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_RS10100 e014cfbb00c75466cac67a046ece462c 281 PRINTS PR00996 Glutamate methyltransferase family signature 209 223 1.2E-28 T 20-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_RS10100 e014cfbb00c75466cac67a046ece462c 281 PRINTS PR00996 Glutamate methyltransferase family signature 141 157 1.2E-28 T 20-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_RS10100 e014cfbb00c75466cac67a046ece462c 281 Pfam PF01739 CheR methyltransferase, SAM binding domain 73 262 4.2E-53 T 20-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 Gene3D G3DSA:3.40.1160.10 2 254 2.9E-68 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 1.4E-5 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 PRINTS PR00474 Glutamate 5-kinase family signature 204 224 1.4E-5 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 1.4E-5 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 Gene3D G3DSA:3.30.70.260 285 355 3.2E-6 T 20-04-2016 AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 62 417 8.7E-111 T 20-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 SUPERFAMILY SSF55021 263 342 1.68E-18 T 20-04-2016 AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 Pfam PF00696 Amino acid kinase family 3 229 1.6E-47 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 PIRSF PIRSF000726 56 426 1.3E-121 T 20-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 20-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 SUPERFAMILY SSF53633 3 251 1.19E-68 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 PANTHER PTHR21499 4 426 4.1E-145 T 20-04-2016 AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 Pfam PF13840 ACT domain 353 414 1.4E-14 T 20-04-2016 IPR027795 GATS-like ACT domain AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 Pfam PF01842 ACT domain 280 340 6.7E-11 T 20-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 SUPERFAMILY SSF55021 343 420 2.65E-23 T 20-04-2016 AMC99_RS00050 9b925bf1bf75bfa5e1454357e9e111f3 426 PANTHER PTHR21499:SF27 4 426 4.1E-145 T 20-04-2016 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 SUPERFAMILY SSF55957 359 444 1.09E-21 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 Gene3D G3DSA:3.30.310.50 370 443 4.4E-16 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 444 45.832 T 20-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 7.3E-34 T 20-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 SUPERFAMILY SSF53738 258 364 5.89E-33 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 PANTHER PTHR22573 2 443 1.4E-161 T 20-04-2016 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 1.3E-42 T 20-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 SUPERFAMILY SSF53738 2 181 1.22E-48 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 1.7E-19 T 20-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 PANTHER PTHR22573:SF15 2 443 1.4E-161 T 20-04-2016 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 375 441 1.2E-15 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 Gene3D G3DSA:3.40.120.10 176 250 3.6E-25 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 Gene3D G3DSA:3.40.120.10 3 152 3.1E-46 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.3E-12 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.3E-12 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.3E-12 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 SUPERFAMILY SSF53738 156 256 2.12E-27 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 Gene3D G3DSA:3.40.120.10 251 366 8.5E-37 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 442 2.3E-182 T 20-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS01485 ce355e4978952189202fc33faa0bf3b3 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 20-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 Gene3D G3DSA:1.10.630.10 17 428 4.8E-116 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 PANTHER PTHR24286 55 429 1.2E-85 T 20-04-2016 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 Pfam PF00067 Cytochrome P450 207 403 1.2E-26 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00385 P450 superfamily signature 379 390 1.6E-7 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00385 P450 superfamily signature 304 315 1.6E-7 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00385 P450 superfamily signature 370 379 1.6E-7 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00385 P450 superfamily signature 269 286 1.6E-7 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 372 381 - T 20-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 SUPERFAMILY SSF48264 23 428 8.77E-93 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 370 379 1.1E-45 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 154 170 1.1E-45 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 349 364 1.1E-45 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 379 390 1.1E-45 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 304 315 1.1E-45 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 321 348 1.1E-45 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 223 245 1.1E-45 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 171 186 1.1E-45 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 107 118 1.1E-45 T 20-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_RS11700 b48c0bbcb0c97f8f98c35ef372711419 430 PANTHER PTHR24286:SF42 55 429 1.2E-85 T 20-04-2016 AMC99_RS03540 4e9557794b19f40a255a1fe0a71bb4bb 323 PANTHER PTHR30518:SF2 7 323 5.4E-71 T 20-04-2016 AMC99_RS03540 4e9557794b19f40a255a1fe0a71bb4bb 323 Gene3D G3DSA:3.30.160.60 285 320 8.3E-16 T 20-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 AMC99_RS03540 4e9557794b19f40a255a1fe0a71bb4bb 323 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 137 316 6.6E-47 T 20-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like AMC99_RS03540 4e9557794b19f40a255a1fe0a71bb4bb 323 PANTHER PTHR30518 7 323 5.4E-71 T 20-04-2016 AMC99_RS03540 4e9557794b19f40a255a1fe0a71bb4bb 323 Pfam PF02618 YceG-like family 39 310 5.4E-74 T 20-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like AMC99_RS01180 858ab7fa89d16617dd0cc445c3055e0e 243 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 32 47 - T 20-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMC99_RS01180 858ab7fa89d16617dd0cc445c3055e0e 243 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 12 242 35.492 T 20-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMC99_RS01180 858ab7fa89d16617dd0cc445c3055e0e 243 PANTHER PTHR10108:SF24 6 243 1.8E-112 T 20-04-2016 AMC99_RS01180 858ab7fa89d16617dd0cc445c3055e0e 243 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 21 242 2.2E-78 T 20-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMC99_RS01180 858ab7fa89d16617dd0cc445c3055e0e 243 SUPERFAMILY SSF53335 9 238 9.31E-47 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS01180 858ab7fa89d16617dd0cc445c3055e0e 243 PANTHER PTHR10108 6 243 1.8E-112 T 20-04-2016 AMC99_RS01180 858ab7fa89d16617dd0cc445c3055e0e 243 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 150 164 - T 20-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMC99_RS01180 858ab7fa89d16617dd0cc445c3055e0e 243 Gene3D G3DSA:3.40.50.150 21 241 6.2E-53 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS01180 858ab7fa89d16617dd0cc445c3055e0e 243 Pfam PF01209 ubiE/COQ5 methyltransferase family 17 242 2.7E-81 T 20-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMC99_RS13145 421bad2513ba988b1ae151ebf21b6bc0 119 Pfam PF00453 Ribosomal protein L20 3 108 3.6E-46 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMC99_RS13145 421bad2513ba988b1ae151ebf21b6bc0 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 6.0E-46 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMC99_RS13145 421bad2513ba988b1ae151ebf21b6bc0 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMC99_RS13145 421bad2513ba988b1ae151ebf21b6bc0 119 PANTHER PTHR10986 2 118 3.9E-58 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMC99_RS13145 421bad2513ba988b1ae151ebf21b6bc0 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.231 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMC99_RS13145 421bad2513ba988b1ae151ebf21b6bc0 119 SUPERFAMILY SSF74731 2 117 1.96E-46 T 20-04-2016 AMC99_RS13145 421bad2513ba988b1ae151ebf21b6bc0 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 1.0E-20 T 20-04-2016 AMC99_RS13145 421bad2513ba988b1ae151ebf21b6bc0 119 Gene3D G3DSA:1.10.1900.20 55 117 9.0E-29 T 20-04-2016 AMC99_RS13145 421bad2513ba988b1ae151ebf21b6bc0 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-34 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMC99_RS13145 421bad2513ba988b1ae151ebf21b6bc0 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-34 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMC99_RS13145 421bad2513ba988b1ae151ebf21b6bc0 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-34 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMC99_RS03715 4c304d0efe903b69bddb56d5d9c49b99 124 SMART SM00418 11 89 2.2E-24 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS03715 4c304d0efe903b69bddb56d5d9c49b99 124 Pfam PF01022 Bacterial regulatory protein, arsR family 18 63 1.5E-13 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS03715 4c304d0efe903b69bddb56d5d9c49b99 124 SUPERFAMILY SSF46785 1 100 4.03E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS03715 4c304d0efe903b69bddb56d5d9c49b99 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 3.7E-11 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS03715 4c304d0efe903b69bddb56d5d9c49b99 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 3.7E-11 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS03715 4c304d0efe903b69bddb56d5d9c49b99 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 3.7E-11 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS03715 4c304d0efe903b69bddb56d5d9c49b99 124 PANTHER PTHR33154 1 101 1.1E-26 T 20-04-2016 AMC99_RS03715 4c304d0efe903b69bddb56d5d9c49b99 124 Gene3D G3DSA:1.10.10.10 3 91 4.1E-28 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS07910 b31188579323758a7cf759e56a89b166 154 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 9 152 1.0E-43 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMC99_RS07910 b31188579323758a7cf759e56a89b166 154 Gene3D G3DSA:2.40.100.10 7 153 5.4E-44 T 20-04-2016 IPR029000 Cyclophilin-like domain AMC99_RS07910 b31188579323758a7cf759e56a89b166 154 PANTHER PTHR11071 19 136 2.1E-42 T 20-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 AMC99_RS07910 b31188579323758a7cf759e56a89b166 154 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 45 62 - T 20-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AMC99_RS07910 b31188579323758a7cf759e56a89b166 154 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 105 117 2.9E-13 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMC99_RS07910 b31188579323758a7cf759e56a89b166 154 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.9E-13 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMC99_RS07910 b31188579323758a7cf759e56a89b166 154 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 50 62 2.9E-13 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMC99_RS07910 b31188579323758a7cf759e56a89b166 154 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 2.9E-13 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMC99_RS07910 b31188579323758a7cf759e56a89b166 154 PIRSF PIRSF001467 1 153 5.4E-30 T 20-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 AMC99_RS07910 b31188579323758a7cf759e56a89b166 154 SUPERFAMILY SSF50891 10 153 1.75E-47 T 20-04-2016 IPR029000 Cyclophilin-like domain AMC99_RS03115 6dd21fb9db5c7c22040ec23630c736e8 600 SMART SM00388 359 427 9.8E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS03115 6dd21fb9db5c7c22040ec23630c736e8 600 Pfam PF00512 His Kinase A (phospho-acceptor) domain 366 427 4.2E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS03115 6dd21fb9db5c7c22040ec23630c736e8 600 SUPERFAMILY SSF47384 365 427 9.22E-9 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS03115 6dd21fb9db5c7c22040ec23630c736e8 600 Gene3D G3DSA:1.10.287.130 368 421 3.6E-5 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS02170 a915b9472bd4e5ac0f026c33fe12dc02 249 SUPERFAMILY SSF51197 13 223 3.3E-27 T 20-04-2016 AMC99_RS02170 a915b9472bd4e5ac0f026c33fe12dc02 249 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 87 204 1.6E-11 T 20-04-2016 IPR008775 Phytanoyl-CoA dioxygenase AMC99_RS02170 a915b9472bd4e5ac0f026c33fe12dc02 249 PANTHER PTHR37563 77 224 6.4E-19 T 20-04-2016 AMC99_RS02170 a915b9472bd4e5ac0f026c33fe12dc02 249 Gene3D G3DSA:2.60.120.620 10 211 7.8E-16 T 20-04-2016 AMC99_RS03520 47d0b9f4b9fa84e9b14b9975fbec108b 398 PANTHER PTHR12124 6 300 9.8E-50 T 20-04-2016 AMC99_RS03520 47d0b9f4b9fa84e9b14b9975fbec108b 398 SMART SM00341 212 293 1.5E-7 T 20-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AMC99_RS03520 47d0b9f4b9fa84e9b14b9975fbec108b 398 Gene3D G3DSA:1.10.150.80 222 268 3.7E-4 T 20-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AMC99_RS03520 47d0b9f4b9fa84e9b14b9975fbec108b 398 SUPERFAMILY SSF53098 6 208 5.44E-60 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS03520 47d0b9f4b9fa84e9b14b9975fbec108b 398 TIGRFAM TIGR01388 rnd: ribonuclease D 6 369 7.0E-111 T 20-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AMC99_RS03520 47d0b9f4b9fa84e9b14b9975fbec108b 398 Gene3D G3DSA:3.30.420.10 6 177 1.2E-17 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS03520 47d0b9f4b9fa84e9b14b9975fbec108b 398 SUPERFAMILY SSF47819 195 301 3.92E-23 T 20-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AMC99_RS03520 47d0b9f4b9fa84e9b14b9975fbec108b 398 SMART SM00474 4 174 3.5E-33 T 20-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMC99_RS03520 47d0b9f4b9fa84e9b14b9975fbec108b 398 Pfam PF00570 HRDC domain 216 282 2.6E-16 T 20-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AMC99_RS03520 47d0b9f4b9fa84e9b14b9975fbec108b 398 Pfam PF01612 3'-5' exonuclease 7 173 2.8E-35 T 20-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMC99_RS03520 47d0b9f4b9fa84e9b14b9975fbec108b 398 SUPERFAMILY SSF47819 310 371 4.14E-9 T 20-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AMC99_RS03520 47d0b9f4b9fa84e9b14b9975fbec108b 398 Hamap MF_01899 Ribonuclease D [rnd]. 4 369 41.164 T 20-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AMC99_RS08250 882102c39d56b4fd77965a3355f0fd3a 341 Gene3D G3DSA:3.40.50.300 5 178 2.4E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08250 882102c39d56b4fd77965a3355f0fd3a 341 SUPERFAMILY SSF52540 7 243 3.19E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08250 882102c39d56b4fd77965a3355f0fd3a 341 Gene3D G3DSA:1.10.8.60 179 249 1.2E-18 T 20-04-2016 AMC99_RS08250 882102c39d56b4fd77965a3355f0fd3a 341 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 221 230 - T 20-04-2016 IPR025944 Sigma-54 interaction domain, conserved site AMC99_RS08250 882102c39d56b4fd77965a3355f0fd3a 341 SMART SM00382 27 178 4.4E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS08250 882102c39d56b4fd77965a3355f0fd3a 341 Pfam PF00158 Sigma-54 interaction domain 8 170 8.7E-60 T 20-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMC99_RS08250 882102c39d56b4fd77965a3355f0fd3a 341 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 320 340 6.3E-6 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS08250 882102c39d56b4fd77965a3355f0fd3a 341 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 303 320 6.3E-6 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS08250 882102c39d56b4fd77965a3355f0fd3a 341 PANTHER PTHR32071:SF38 2 341 2.3E-144 T 20-04-2016 AMC99_RS08250 882102c39d56b4fd77965a3355f0fd3a 341 PANTHER PTHR32071 2 341 2.3E-144 T 20-04-2016 AMC99_RS08250 882102c39d56b4fd77965a3355f0fd3a 341 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 93 108 - T 20-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMC99_RS08250 882102c39d56b4fd77965a3355f0fd3a 341 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 337 1.5E-144 T 20-04-2016 IPR014317 Transcription activator PspF AMC99_RS08250 882102c39d56b4fd77965a3355f0fd3a 341 SUPERFAMILY SSF46689 221 339 2.42E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS08250 882102c39d56b4fd77965a3355f0fd3a 341 Pfam PF02954 Bacterial regulatory protein, Fis family 298 336 9.8E-7 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS08250 882102c39d56b4fd77965a3355f0fd3a 341 Gene3D G3DSA:1.10.10.60 286 339 9.8E-10 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS04530 8aee9aea69b059dde1ab932f07a2a70f 189 Gene3D G3DSA:3.40.50.300 22 186 1.3E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04530 8aee9aea69b059dde1ab932f07a2a70f 189 PANTHER PTHR21087:SF0 21 189 1.7E-54 T 20-04-2016 AMC99_RS04530 8aee9aea69b059dde1ab932f07a2a70f 189 ProSitePatterns PS01128 Shikimate kinase signature. 77 102 - T 20-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS04530 8aee9aea69b059dde1ab932f07a2a70f 189 PANTHER PTHR21087 21 189 1.7E-54 T 20-04-2016 AMC99_RS04530 8aee9aea69b059dde1ab932f07a2a70f 189 SUPERFAMILY SSF52540 22 172 3.41E-27 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04530 8aee9aea69b059dde1ab932f07a2a70f 189 PRINTS PR01100 Shikimate kinase family signature 76 84 8.9E-21 T 20-04-2016 AMC99_RS04530 8aee9aea69b059dde1ab932f07a2a70f 189 PRINTS PR01100 Shikimate kinase family signature 94 103 8.9E-21 T 20-04-2016 AMC99_RS04530 8aee9aea69b059dde1ab932f07a2a70f 189 PRINTS PR01100 Shikimate kinase family signature 115 132 8.9E-21 T 20-04-2016 AMC99_RS04530 8aee9aea69b059dde1ab932f07a2a70f 189 PRINTS PR01100 Shikimate kinase family signature 48 61 8.9E-21 T 20-04-2016 AMC99_RS04530 8aee9aea69b059dde1ab932f07a2a70f 189 PRINTS PR01100 Shikimate kinase family signature 24 39 8.9E-21 T 20-04-2016 AMC99_RS04530 8aee9aea69b059dde1ab932f07a2a70f 189 Hamap MF_00109 Shikimate kinase [aroK]. 21 186 27.085 T 20-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS04530 8aee9aea69b059dde1ab932f07a2a70f 189 Pfam PF01202 Shikimate kinase 30 185 2.3E-47 T 20-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS05880 dc54ab42219f695277f1e93a8b910ed8 466 Gene3D G3DSA:3.40.50.970 142 333 5.8E-93 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS05880 dc54ab42219f695277f1e93a8b910ed8 466 Pfam PF02780 Transketolase, C-terminal domain 333 455 1.3E-40 T 20-04-2016 IPR033248 Transketolase, C-terminal domain AMC99_RS05880 dc54ab42219f695277f1e93a8b910ed8 466 Gene3D G3DSA:2.40.50.100 1 97 1.5E-35 T 20-04-2016 AMC99_RS05880 dc54ab42219f695277f1e93a8b910ed8 466 Pfam PF00364 Biotin-requiring enzyme 4 77 3.2E-20 T 20-04-2016 IPR000089 Biotin/lipoyl attachment AMC99_RS05880 dc54ab42219f695277f1e93a8b910ed8 466 SUPERFAMILY SSF51230 1 97 2.49E-29 T 20-04-2016 IPR011053 Single hybrid motif AMC99_RS05880 dc54ab42219f695277f1e93a8b910ed8 466 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 20-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMC99_RS05880 dc54ab42219f695277f1e93a8b910ed8 466 Gene3D G3DSA:3.40.50.920 334 463 5.7E-47 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMC99_RS05880 dc54ab42219f695277f1e93a8b910ed8 466 SUPERFAMILY SSF52922 327 463 2.36E-45 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMC99_RS05880 dc54ab42219f695277f1e93a8b910ed8 466 PANTHER PTHR11624 131 465 2.5E-169 T 20-04-2016 IPR033247 Transketolase family AMC99_RS05880 dc54ab42219f695277f1e93a8b910ed8 466 SUPERFAMILY SSF52518 142 343 5.89E-67 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS05880 dc54ab42219f695277f1e93a8b910ed8 466 Pfam PF02779 Transketolase, pyrimidine binding domain 142 316 2.8E-48 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_RS05880 dc54ab42219f695277f1e93a8b910ed8 466 SMART SM00861 143 318 1.0E-58 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_RS11630 0ca33d567d91755ca6e4ca4286cfce36 205 Pfam PF01612 3'-5' exonuclease 18 170 2.3E-31 T 20-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMC99_RS11630 0ca33d567d91755ca6e4ca4286cfce36 205 PANTHER PTHR12124 8 185 1.5E-73 T 20-04-2016 AMC99_RS11630 0ca33d567d91755ca6e4ca4286cfce36 205 SUPERFAMILY SSF53098 18 192 1.61E-48 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS11630 0ca33d567d91755ca6e4ca4286cfce36 205 PANTHER PTHR12124:SF48 8 185 1.5E-73 T 20-04-2016 AMC99_RS11630 0ca33d567d91755ca6e4ca4286cfce36 205 Gene3D G3DSA:3.30.420.10 16 176 1.4E-20 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS11630 0ca33d567d91755ca6e4ca4286cfce36 205 SMART SM00474 1 170 8.1E-30 T 20-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMC99_RS03170 14f0d77631f3cc9bd0839c6ec87f750c 106 SMART SM01323 15 97 2.0E-41 T 20-04-2016 IPR003849 Preprotein translocase YajC AMC99_RS03170 14f0d77631f3cc9bd0839c6ec87f750c 106 PANTHER PTHR33909:SF1 1 100 5.0E-28 T 20-04-2016 AMC99_RS03170 14f0d77631f3cc9bd0839c6ec87f750c 106 PRINTS PR01853 Bacterial YajC preprotein translocase signature 17 37 2.8E-13 T 20-04-2016 IPR003849 Preprotein translocase YajC AMC99_RS03170 14f0d77631f3cc9bd0839c6ec87f750c 106 PRINTS PR01853 Bacterial YajC preprotein translocase signature 55 73 2.8E-13 T 20-04-2016 IPR003849 Preprotein translocase YajC AMC99_RS03170 14f0d77631f3cc9bd0839c6ec87f750c 106 PANTHER PTHR33909 1 100 5.0E-28 T 20-04-2016 AMC99_RS03170 14f0d77631f3cc9bd0839c6ec87f750c 106 Pfam PF02699 Preprotein translocase subunit 20 93 2.0E-27 T 20-04-2016 IPR003849 Preprotein translocase YajC AMC99_RS03170 14f0d77631f3cc9bd0839c6ec87f750c 106 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 97 1.2E-27 T 20-04-2016 IPR003849 Preprotein translocase YajC AMC99_RS03535 3c348cf0b5bc60f703e5efa959c7e92e 419 SUPERFAMILY SSF53901 221 418 2.74E-70 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS03535 3c348cf0b5bc60f703e5efa959c7e92e 419 SMART SM00825 Beta-ketoacyl synthase 4 418 7.6E-17 T 20-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMC99_RS03535 3c348cf0b5bc60f703e5efa959c7e92e 419 Gene3D G3DSA:3.40.47.10 1 266 1.7E-76 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS03535 3c348cf0b5bc60f703e5efa959c7e92e 419 Gene3D G3DSA:3.40.47.10 270 418 2.2E-57 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS03535 3c348cf0b5bc60f703e5efa959c7e92e 419 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 160 176 - T 20-04-2016 IPR018201 Beta-ketoacyl synthase, active site AMC99_RS03535 3c348cf0b5bc60f703e5efa959c7e92e 419 PANTHER PTHR11712 1 417 2.5E-195 T 20-04-2016 AMC99_RS03535 3c348cf0b5bc60f703e5efa959c7e92e 419 SUPERFAMILY SSF53901 1 258 5.59E-74 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS03535 3c348cf0b5bc60f703e5efa959c7e92e 419 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 253 3.1E-60 T 20-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal AMC99_RS03535 3c348cf0b5bc60f703e5efa959c7e92e 419 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 374 2.4E-36 T 20-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal AMC99_RS03535 3c348cf0b5bc60f703e5efa959c7e92e 419 PIRSF PIRSF000447 1 419 1.4E-178 T 20-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 AMC99_RS03535 3c348cf0b5bc60f703e5efa959c7e92e 419 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 416 3.2E-187 T 20-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 AMC99_RS07965 abc432d58d4dc03d04ae0ce489481c73 1140 PANTHER PTHR18937 1 351 3.7E-211 T 20-04-2016 AMC99_RS07965 abc432d58d4dc03d04ae0ce489481c73 1140 PANTHER PTHR18937 373 1134 3.7E-211 T 20-04-2016 AMC99_RS07965 abc432d58d4dc03d04ae0ce489481c73 1140 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1133 20.199 T 20-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AMC99_RS07965 abc432d58d4dc03d04ae0ce489481c73 1140 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1124 1.8E-54 T 20-04-2016 IPR003395 RecF/RecN/SMC, N-terminal AMC99_RS07965 abc432d58d4dc03d04ae0ce489481c73 1140 Gene3D G3DSA:3.40.50.300 978 1133 6.4E-78 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07965 abc432d58d4dc03d04ae0ce489481c73 1140 Gene3D G3DSA:3.40.50.300 1 157 6.4E-78 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07965 abc432d58d4dc03d04ae0ce489481c73 1140 PANTHER PTHR18937:SF261 1 351 3.7E-211 T 20-04-2016 AMC99_RS07965 abc432d58d4dc03d04ae0ce489481c73 1140 PANTHER PTHR18937:SF261 373 1134 3.7E-211 T 20-04-2016 AMC99_RS07965 abc432d58d4dc03d04ae0ce489481c73 1140 SUPERFAMILY SSF52540 1 201 4.59E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07965 abc432d58d4dc03d04ae0ce489481c73 1140 SUPERFAMILY SSF52540 923 1131 4.59E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07965 abc432d58d4dc03d04ae0ce489481c73 1140 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 3 1131 7.4E-239 T 20-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AMC99_RS10535 bd0092e0777f049d2e45ffcb65465cb7 979 Pfam PF08751 TrwC relaxase 11 275 1.1E-76 T 20-04-2016 IPR014862 TrwC relaxase AMC99_RS10535 bd0092e0777f049d2e45ffcb65465cb7 979 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 281 5.2E-78 T 20-04-2016 IPR014059 Conjugative relaxase, N-terminal AMC99_RS10535 bd0092e0777f049d2e45ffcb65465cb7 979 SUPERFAMILY SSF52540 589 643 3.98E-24 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10535 bd0092e0777f049d2e45ffcb65465cb7 979 SUPERFAMILY SSF55464 1 294 5.49E-83 T 20-04-2016 AMC99_RS10535 bd0092e0777f049d2e45ffcb65465cb7 979 Gene3D G3DSA:3.40.50.300 452 647 1.3E-24 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10535 bd0092e0777f049d2e45ffcb65465cb7 979 SUPERFAMILY SSF52540 797 915 3.98E-24 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10535 bd0092e0777f049d2e45ffcb65465cb7 979 SUPERFAMILY SSF52540 677 709 3.98E-24 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10535 bd0092e0777f049d2e45ffcb65465cb7 979 Pfam PF13604 AAA domain 459 656 2.2E-43 T 20-04-2016 AMC99_RS10535 bd0092e0777f049d2e45ffcb65465cb7 979 SUPERFAMILY SSF52540 455 607 1.32E-19 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02665 b748c33c0cb25972b495c6802c7600cd 141 PANTHER PTHR36503 1 134 3.3E-58 T 20-04-2016 AMC99_RS02665 b748c33c0cb25972b495c6802c7600cd 141 Gene3D G3DSA:3.10.180.10 1 130 8.6E-28 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS02665 b748c33c0cb25972b495c6802c7600cd 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 124 3.1E-5 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_RS02665 b748c33c0cb25972b495c6802c7600cd 141 PANTHER PTHR36503:SF2 1 134 3.3E-58 T 20-04-2016 AMC99_RS02665 b748c33c0cb25972b495c6802c7600cd 141 SUPERFAMILY SSF54593 1 128 2.82E-23 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS05550 40a574381a98917b2af9dad5e4af7568 116 Pfam PF02021 Uncharacterised protein family UPF0102 14 100 1.1E-15 T 20-04-2016 IPR003509 Uncharacterised protein family UPF0102 AMC99_RS05550 40a574381a98917b2af9dad5e4af7568 116 Gene3D G3DSA:3.40.1350.10 13 115 2.9E-23 T 20-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 AMC99_RS05550 40a574381a98917b2af9dad5e4af7568 116 PANTHER PTHR34039:SF1 2 115 1.1E-15 T 20-04-2016 AMC99_RS05550 40a574381a98917b2af9dad5e4af7568 116 SUPERFAMILY SSF52980 8 115 3.22E-18 T 20-04-2016 IPR011335 Restriction endonuclease type II-like AMC99_RS05550 40a574381a98917b2af9dad5e4af7568 116 PANTHER PTHR34039 2 115 1.1E-15 T 20-04-2016 AMC99_RS06330 bc5c0c31f7f272b7c368a7b3f835d40f 214 Pfam PF02563 Polysaccharide biosynthesis/export protein 45 117 7.5E-20 T 20-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMC99_RS06330 bc5c0c31f7f272b7c368a7b3f835d40f 214 PANTHER PTHR33619 28 213 4.5E-27 T 20-04-2016 AMC99_RS06330 bc5c0c31f7f272b7c368a7b3f835d40f 214 Gene3D G3DSA:3.30.1950.10 52 120 1.5E-18 T 20-04-2016 AMC99_RS06330 bc5c0c31f7f272b7c368a7b3f835d40f 214 Gene3D G3DSA:3.10.560.10 122 211 2.6E-16 T 20-04-2016 AMC99_RS06330 bc5c0c31f7f272b7c368a7b3f835d40f 214 PANTHER PTHR33619:SF3 28 213 4.5E-27 T 20-04-2016 AMC99_RS02225 92759edb62f41d02c5a40cdb7a61d310 120 PANTHER PTHR39175:SF1 3 120 1.6E-28 T 20-04-2016 AMC99_RS02225 92759edb62f41d02c5a40cdb7a61d310 120 PANTHER PTHR39175 3 120 1.6E-28 T 20-04-2016 AMC99_RS02225 92759edb62f41d02c5a40cdb7a61d310 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 116 2.1E-5 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_RS02225 92759edb62f41d02c5a40cdb7a61d310 120 Gene3D G3DSA:3.10.180.10 7 119 1.1E-35 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS02225 92759edb62f41d02c5a40cdb7a61d310 120 SUPERFAMILY SSF54593 1 118 7.65E-20 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS05925 1790b1591ec3df297cc87672359c002e 87 SUPERFAMILY SSF52833 3 86 2.48E-26 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS05925 1790b1591ec3df297cc87672359c002e 87 Gene3D G3DSA:3.40.30.10 3 76 1.2E-25 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS05925 1790b1591ec3df297cc87672359c002e 87 PANTHER PTHR10168 8 86 2.7E-23 T 20-04-2016 AMC99_RS05925 1790b1591ec3df297cc87672359c002e 87 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 6 85 2.2E-30 T 20-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 AMC99_RS05925 1790b1591ec3df297cc87672359c002e 87 Pfam PF00462 Glutaredoxin 8 66 1.2E-18 T 20-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMC99_RS05925 1790b1591ec3df297cc87672359c002e 87 PRINTS PR00160 Glutaredoxin signature 63 76 5.8E-11 T 20-04-2016 IPR014025 Glutaredoxin subgroup AMC99_RS05925 1790b1591ec3df297cc87672359c002e 87 PRINTS PR00160 Glutaredoxin signature 6 24 5.8E-11 T 20-04-2016 IPR014025 Glutaredoxin subgroup AMC99_RS05925 1790b1591ec3df297cc87672359c002e 87 PRINTS PR00160 Glutaredoxin signature 49 62 5.8E-11 T 20-04-2016 IPR014025 Glutaredoxin subgroup AMC99_RS04740 ca3b1e418269dbd9ca47c02993b1127f 431 PANTHER PTHR23151 6 431 4.0E-161 T 20-04-2016 AMC99_RS04740 ca3b1e418269dbd9ca47c02993b1127f 431 Gene3D G3DSA:3.30.559.10 191 429 5.3E-78 T 20-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain AMC99_RS04740 ca3b1e418269dbd9ca47c02993b1127f 431 PANTHER PTHR23151:SF62 6 431 4.0E-161 T 20-04-2016 AMC99_RS04740 ca3b1e418269dbd9ca47c02993b1127f 431 Gene3D G3DSA:4.10.320.10 138 182 5.5E-11 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMC99_RS04740 ca3b1e418269dbd9ca47c02993b1127f 431 Pfam PF02817 e3 binding domain 144 177 1.8E-8 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMC99_RS04740 ca3b1e418269dbd9ca47c02993b1127f 431 SUPERFAMILY SSF47005 140 181 1.02E-5 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMC99_RS04740 ca3b1e418269dbd9ca47c02993b1127f 431 Gene3D G3DSA:2.40.50.100 2 93 3.9E-25 T 20-04-2016 AMC99_RS04740 ca3b1e418269dbd9ca47c02993b1127f 431 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 20-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMC99_RS04740 ca3b1e418269dbd9ca47c02993b1127f 431 Pfam PF00364 Biotin-requiring enzyme 5 76 6.9E-21 T 20-04-2016 IPR000089 Biotin/lipoyl attachment AMC99_RS04740 ca3b1e418269dbd9ca47c02993b1127f 431 SUPERFAMILY SSF52777 191 429 1.11E-73 T 20-04-2016 AMC99_RS04740 ca3b1e418269dbd9ca47c02993b1127f 431 SUPERFAMILY SSF51230 3 95 3.26E-26 T 20-04-2016 IPR011053 Single hybrid motif AMC99_RS04740 ca3b1e418269dbd9ca47c02993b1127f 431 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 197 429 4.2E-76 T 20-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 AMC99_RS11045 f4250c45464e6bc410d3628a9faabdf9 290 SUPERFAMILY SSF53167 5 268 3.76E-86 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMC99_RS11045 f4250c45464e6bc410d3628a9faabdf9 290 PANTHER PTHR11904:SF1 7 290 2.7E-122 T 20-04-2016 AMC99_RS11045 f4250c45464e6bc410d3628a9faabdf9 290 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 7 245 4.1E-88 T 20-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 AMC99_RS11045 f4250c45464e6bc410d3628a9faabdf9 290 PANTHER PTHR11904 7 290 2.7E-122 T 20-04-2016 IPR001369 PNP/MTAP phosphorylase AMC99_RS11045 f4250c45464e6bc410d3628a9faabdf9 290 Gene3D G3DSA:3.40.50.1580 6 254 3.3E-86 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMC99_RS11045 f4250c45464e6bc410d3628a9faabdf9 290 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 53 93 - T 20-04-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 AMC99_RS11045 f4250c45464e6bc410d3628a9faabdf9 290 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 5 269 39.19 T 20-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 AMC99_RS11045 f4250c45464e6bc410d3628a9faabdf9 290 Pfam PF01048 Phosphorylase superfamily 6 244 1.8E-40 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMC99_RS10130 bc889721742b0e7e8e2bccf296f407d1 392 Gene3D G3DSA:1.20.1090.10 201 391 1.4E-44 T 20-04-2016 AMC99_RS10130 bc889721742b0e7e8e2bccf296f407d1 392 PANTHER PTHR11496:SF76 16 382 7.8E-101 T 20-04-2016 AMC99_RS10130 bc889721742b0e7e8e2bccf296f407d1 392 Pfam PF00465 Iron-containing alcohol dehydrogenase 16 380 1.3E-79 T 20-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 AMC99_RS10130 bc889721742b0e7e8e2bccf296f407d1 392 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 277 297 - T 20-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMC99_RS10130 bc889721742b0e7e8e2bccf296f407d1 392 PANTHER PTHR11496 16 382 7.8E-101 T 20-04-2016 AMC99_RS10130 bc889721742b0e7e8e2bccf296f407d1 392 Gene3D G3DSA:3.40.50.1970 10 200 4.9E-36 T 20-04-2016 AMC99_RS10130 bc889721742b0e7e8e2bccf296f407d1 392 SUPERFAMILY SSF56796 10 389 7.46E-87 T 20-04-2016 AMC99_RS10320 ff3af5f310aa9a3aedf9ea6876c43009 542 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 57 375 9.1E-50 T 20-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 AMC99_RS10320 ff3af5f310aa9a3aedf9ea6876c43009 542 Gene3D G3DSA:3.40.50.300 56 123 4.0E-33 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10320 ff3af5f310aa9a3aedf9ea6876c43009 542 Gene3D G3DSA:3.40.50.300 259 423 4.0E-33 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10320 ff3af5f310aa9a3aedf9ea6876c43009 542 SUPERFAMILY SSF52540 57 425 7.73E-32 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10320 ff3af5f310aa9a3aedf9ea6876c43009 542 PANTHER PTHR37937 52 477 1.3E-16 T 20-04-2016 AMC99_RS10320 ff3af5f310aa9a3aedf9ea6876c43009 542 PANTHER PTHR37937:SF1 52 477 1.3E-16 T 20-04-2016 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 1.6E-85 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 1.6E-85 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 1.6E-85 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 1.6E-85 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 79 105 1.6E-85 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 1.6E-85 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 1.6E-85 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 1.6E-85 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 314 624 2.9E-95 T 20-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 112 135 7.5E-27 T 20-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 7.5E-27 T 20-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 312 327 7.5E-27 T 20-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 188 203 7.5E-27 T 20-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 392 411 7.5E-27 T 20-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 350 367 7.5E-27 T 20-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 Pfam PF01578 Cytochrome C assembly protein 88 294 9.3E-47 T 20-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PANTHER PTHR30009 1 415 2.3E-213 T 20-04-2016 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PANTHER PTHR30009 455 648 2.3E-213 T 20-04-2016 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PANTHER PTHR30009:SF0 1 415 2.3E-213 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 PANTHER PTHR30009:SF0 455 648 2.3E-213 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03430 be74d2cd70b4b57c52eb5f92b6ec8304 651 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 52 622 1.1E-174 T 20-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS05430 e5690918a5925d2960f4c4dedcbb5d2e 124 SUPERFAMILY SSF46955 6 121 3.0E-24 T 20-04-2016 IPR009061 Putative DNA-binding domain AMC99_RS05430 e5690918a5925d2960f4c4dedcbb5d2e 124 Gene3D G3DSA:1.10.1660.10 59 119 4.2E-15 T 20-04-2016 AMC99_RS05430 e5690918a5925d2960f4c4dedcbb5d2e 124 Pfam PF09278 MerR, DNA binding 47 113 3.7E-15 T 20-04-2016 IPR015358 Transcription regulator MerR, DNA binding AMC99_RS05430 e5690918a5925d2960f4c4dedcbb5d2e 124 Gene3D G3DSA:1.10.1660.10 4 58 4.4E-20 T 20-04-2016 AMC99_RS05430 e5690918a5925d2960f4c4dedcbb5d2e 124 Pfam PF00376 MerR family regulatory protein 7 35 3.3E-8 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_RS05430 e5690918a5925d2960f4c4dedcbb5d2e 124 SMART SM00422 6 73 2.5E-15 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_RS05430 e5690918a5925d2960f4c4dedcbb5d2e 124 PANTHER PTHR30204 1 122 2.0E-18 T 20-04-2016 AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 PANTHER PTHR10836:SF50 1 332 2.1E-196 T 20-04-2016 AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 8.8E-41 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 8.8E-41 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 8.8E-41 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 8.8E-41 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 8.8E-41 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 153 1.4E-54 T 20-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 Gene3D G3DSA:3.30.360.10 162 316 4.1E-74 T 20-04-2016 AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 SMART SM00846 3 153 6.9E-89 T 20-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 20-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 SUPERFAMILY SSF51735 4 168 1.39E-59 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 SUPERFAMILY SSF55347 153 315 6.55E-70 T 20-04-2016 AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 2.1E-131 T 20-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 8.8E-65 T 20-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 PIRSF PIRSF000149 1 335 2.4E-135 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 Gene3D G3DSA:3.40.50.720 1 161 2.8E-70 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS04775 1426cac0850b11cea1dd90b2e62f84ba 335 PANTHER PTHR10836 1 332 2.1E-196 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMC99_RS03270 a2c5aeeb8bb08c73b5103c824b8836fa 608 SUPERFAMILY SSF52540 104 298 3.12E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03270 a2c5aeeb8bb08c73b5103c824b8836fa 608 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 312 451 1.8E-45 T 20-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AMC99_RS03270 a2c5aeeb8bb08c73b5103c824b8836fa 608 SUPERFAMILY SSF48019 323 446 7.91E-27 T 20-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 AMC99_RS03270 a2c5aeeb8bb08c73b5103c824b8836fa 608 Pfam PF12362 DNA polymerase III gamma and tau subunits C terminal 483 592 5.0E-28 T 20-04-2016 IPR022107 DNA polymerase III, subunit gamma/ tau, C-terminal AMC99_RS03270 a2c5aeeb8bb08c73b5103c824b8836fa 608 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 74 436 2.3E-127 T 20-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AMC99_RS03270 a2c5aeeb8bb08c73b5103c824b8836fa 608 PANTHER PTHR11669 59 482 8.8E-164 T 20-04-2016 AMC99_RS03270 a2c5aeeb8bb08c73b5103c824b8836fa 608 Pfam PF13177 DNA polymerase III, delta subunit 91 253 4.9E-38 T 20-04-2016 AMC99_RS03270 a2c5aeeb8bb08c73b5103c824b8836fa 608 PANTHER PTHR11669:SF0 59 482 8.8E-164 T 20-04-2016 AMC99_RS03270 a2c5aeeb8bb08c73b5103c824b8836fa 608 Gene3D G3DSA:1.10.8.60 242 322 1.3E-28 T 20-04-2016 AMC99_RS03270 a2c5aeeb8bb08c73b5103c824b8836fa 608 Gene3D G3DSA:3.40.50.300 70 241 9.3E-65 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03270 a2c5aeeb8bb08c73b5103c824b8836fa 608 SMART SM00382 108 255 1.2E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS03270 a2c5aeeb8bb08c73b5103c824b8836fa 608 Gene3D G3DSA:1.20.272.10 323 438 2.6E-27 T 20-04-2016 AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 125 287 6.0E-58 T 20-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 Gene3D G3DSA:3.40.50.720 141 270 6.8E-47 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 20-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 289 35.417 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 3.1E-38 T 20-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 262 280 5.5E-72 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 5.5E-72 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 5.5E-72 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 245 261 5.5E-72 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 5.5E-72 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 5.5E-72 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 5.5E-72 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 SUPERFAMILY SSF53223 3 122 4.6E-37 T 20-04-2016 AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 PANTHER PTHR10025 1 291 1.5E-125 T 20-04-2016 AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 SUPERFAMILY SSF51735 124 288 2.98E-44 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS11110 d55ec78603a1321fffd82dd6ce190e3d 297 Gene3D G3DSA:3.40.192.10 7 140 2.8E-45 T 20-04-2016 AMC99_RS13525 f334e05bca032d0b9563103601e22f6f 454 SUPERFAMILY SSF50182 218 284 6.21E-15 T 20-04-2016 IPR010920 LSM domain AMC99_RS13525 f334e05bca032d0b9563103601e22f6f 454 PANTHER PTHR30221 43 420 5.9E-48 T 20-04-2016 AMC99_RS13525 f334e05bca032d0b9563103601e22f6f 454 Pfam PF00924 Mechanosensitive ion channel 175 371 5.0E-37 T 20-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMC99_RS13525 f334e05bca032d0b9563103601e22f6f 454 Gene3D G3DSA:2.30.30.60 234 283 5.7E-14 T 20-04-2016 AMC99_RS13525 f334e05bca032d0b9563103601e22f6f 454 PANTHER PTHR30221:SF1 43 420 5.9E-48 T 20-04-2016 AMC99_RS13525 f334e05bca032d0b9563103601e22f6f 454 SUPERFAMILY SSF82689 285 384 4.97E-18 T 20-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMC99_RS13525 f334e05bca032d0b9563103601e22f6f 454 Gene3D G3DSA:3.30.70.100 286 371 4.6E-13 T 20-04-2016 AMC99_RS13525 f334e05bca032d0b9563103601e22f6f 454 Pfam PF04972 BON domain 43 106 1.3E-12 T 20-04-2016 IPR007055 BON domain AMC99_RS09585 369b2c375637f286783da0446893e38d 380 Pfam PF00849 RNA pseudouridylate synthase 103 252 3.4E-36 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS09585 369b2c375637f286783da0446893e38d 380 SUPERFAMILY SSF55174 16 66 2.32E-5 T 20-04-2016 AMC99_RS09585 369b2c375637f286783da0446893e38d 380 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 311 4.6E-59 T 20-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS09585 369b2c375637f286783da0446893e38d 380 Gene3D G3DSA:3.10.290.10 18 102 3.9E-5 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS09585 369b2c375637f286783da0446893e38d 380 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 20-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS09585 369b2c375637f286783da0446893e38d 380 PANTHER PTHR11079 68 323 7.7E-71 T 20-04-2016 AMC99_RS09585 369b2c375637f286783da0446893e38d 380 PANTHER PTHR11079 7 47 7.7E-71 T 20-04-2016 AMC99_RS09585 369b2c375637f286783da0446893e38d 380 PANTHER PTHR11079:SF74 68 323 7.7E-71 T 20-04-2016 AMC99_RS09585 369b2c375637f286783da0446893e38d 380 PANTHER PTHR11079:SF74 7 47 7.7E-71 T 20-04-2016 AMC99_RS09585 369b2c375637f286783da0446893e38d 380 SUPERFAMILY SSF55120 94 318 3.2E-60 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS01185 01b7d9777677174670903c625ab675ef 501 Pfam PF03109 ABC1 family 95 211 5.7E-31 T 20-04-2016 IPR004147 UbiB domain AMC99_RS01185 01b7d9777677174670903c625ab675ef 501 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 40 422 2.5E-156 T 20-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 AMC99_RS01185 01b7d9777677174670903c625ab675ef 501 SUPERFAMILY SSF56112 174 413 4.63E-35 T 20-04-2016 IPR011009 Protein kinase-like domain AMC99_RS01185 01b7d9777677174670903c625ab675ef 501 SUPERFAMILY SSF56112 76 139 4.63E-35 T 20-04-2016 IPR011009 Protein kinase-like domain AMC99_RS01185 01b7d9777677174670903c625ab675ef 501 PANTHER PTHR10566 42 420 1.8E-140 T 20-04-2016 AMC99_RS01185 01b7d9777677174670903c625ab675ef 501 PANTHER PTHR10566:SF79 42 420 1.8E-140 T 20-04-2016 AMC99_RS01185 01b7d9777677174670903c625ab675ef 501 Gene3D G3DSA:3.90.1200.10 194 295 4.9E-9 T 20-04-2016 AMC99_RS12250 99dd99ad9054afe9a0059128f88f5068 159 PANTHER PTHR11545 5 147 6.8E-67 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMC99_RS12250 99dd99ad9054afe9a0059128f88f5068 159 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 12 147 6.5E-58 T 20-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMC99_RS12250 99dd99ad9054afe9a0059128f88f5068 159 PIRSF PIRSF002181 3 159 5.2E-52 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMC99_RS12250 99dd99ad9054afe9a0059128f88f5068 159 Gene3D G3DSA:3.90.1180.10 9 147 9.6E-61 T 20-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 AMC99_RS12250 99dd99ad9054afe9a0059128f88f5068 159 Pfam PF00572 Ribosomal protein L13 19 144 1.4E-53 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMC99_RS12250 99dd99ad9054afe9a0059128f88f5068 159 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 20 147 27.838 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMC99_RS12250 99dd99ad9054afe9a0059128f88f5068 159 SUPERFAMILY SSF52161 11 149 3.66E-56 T 20-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 AMC99_RS00065 c72b4e3036738705a92e6da6013e8c78 339 PANTHER PTHR32332:SF20 9 339 6.7E-72 T 20-04-2016 AMC99_RS00065 c72b4e3036738705a92e6da6013e8c78 339 SUPERFAMILY SSF51412 14 337 2.29E-52 T 20-04-2016 AMC99_RS00065 c72b4e3036738705a92e6da6013e8c78 339 PANTHER PTHR32332 9 339 6.7E-72 T 20-04-2016 AMC99_RS00065 c72b4e3036738705a92e6da6013e8c78 339 Pfam PF03060 Nitronate monooxygenase 91 330 1.1E-27 T 20-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMC99_RS00065 c72b4e3036738705a92e6da6013e8c78 339 Gene3D G3DSA:3.20.20.70 5 325 3.1E-52 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS00830 fe76bd6173031622d7b28aa6eac8a537 651 Pfam PF00733 Asparagine synthase 249 625 2.3E-12 T 20-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AMC99_RS00830 fe76bd6173031622d7b28aa6eac8a537 651 SUPERFAMILY SSF56235 76 227 4.32E-18 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS00830 fe76bd6173031622d7b28aa6eac8a537 651 Gene3D G3DSA:3.40.50.620 489 616 2.2E-12 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS00830 fe76bd6173031622d7b28aa6eac8a537 651 Gene3D G3DSA:3.40.50.620 226 397 2.2E-12 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS00830 fe76bd6173031622d7b28aa6eac8a537 651 Pfam PF13537 Glutamine amidotransferase domain 76 170 9.2E-8 T 20-04-2016 IPR017932 Glutamine amidotransferase type 2 domain AMC99_RS00830 fe76bd6173031622d7b28aa6eac8a537 651 SUPERFAMILY SSF52402 506 601 3.95E-16 T 20-04-2016 AMC99_RS00830 fe76bd6173031622d7b28aa6eac8a537 651 SUPERFAMILY SSF52402 223 391 3.95E-16 T 20-04-2016 AMC99_RS00830 fe76bd6173031622d7b28aa6eac8a537 651 Gene3D G3DSA:3.60.20.10 76 225 1.0E-16 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS13660 75af927f59b9f2a024452c4b2eba60ed 171 PANTHER PTHR11560 1 167 3.3E-49 T 20-04-2016 AMC99_RS13660 75af927f59b9f2a024452c4b2eba60ed 171 Pfam PF00466 Ribosomal protein L10 2 98 6.2E-24 T 20-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AMC99_RS13660 75af927f59b9f2a024452c4b2eba60ed 171 SUPERFAMILY SSF160369 1 166 1.7E-54 T 20-04-2016 AMC99_RS13660 75af927f59b9f2a024452c4b2eba60ed 171 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 22 140 0.003 T 20-04-2016 AMC99_RS13660 75af927f59b9f2a024452c4b2eba60ed 171 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 20-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS13660 75af927f59b9f2a024452c4b2eba60ed 171 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 25.611 T 20-04-2016 IPR022973 Ribosomal protein L10 AMC99_RS11360 ebaa7fc8781eaf8b608ed3a67a968e62 258 Gene3D G3DSA:2.40.170.20 148 234 7.5E-4 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS11360 ebaa7fc8781eaf8b608ed3a67a968e62 258 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 54 239 1.2E-19 T 20-04-2016 IPR010239 Conserved hypothetical protein CHP02001 AMC99_RS11360 ebaa7fc8781eaf8b608ed3a67a968e62 258 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 46 240 1.2E-34 T 20-04-2016 IPR010239 Conserved hypothetical protein CHP02001 AMC99_RS11360 ebaa7fc8781eaf8b608ed3a67a968e62 258 SUPERFAMILY SSF56935 138 231 7.0E-5 T 20-04-2016 AMC99_RS12655 41728ac8cff1c6b66279734d21c8ee89 173 Gene3D G3DSA:1.20.1260.10 11 139 2.6E-8 T 20-04-2016 IPR012347 Ferritin-related AMC99_RS12655 41728ac8cff1c6b66279734d21c8ee89 173 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 6 173 2.1E-68 T 20-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 AMC99_RS12655 41728ac8cff1c6b66279734d21c8ee89 173 PANTHER PTHR11237 3 173 1.8E-83 T 20-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 AMC99_RS12655 41728ac8cff1c6b66279734d21c8ee89 173 SUPERFAMILY SSF47240 5 142 1.04E-20 T 20-04-2016 IPR009078 Ferritin-like superfamily AMC99_RS12655 41728ac8cff1c6b66279734d21c8ee89 173 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 1 173 27.52 T 20-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 AMC99_RS07310 fb01847a60684f96bfbefb78852285ac 709 SUPERFAMILY SSF55486 31 701 2.56E-162 T 20-04-2016 AMC99_RS07310 fb01847a60684f96bfbefb78852285ac 709 Gene3D G3DSA:1.20.1050.40 31 161 4.9E-20 T 20-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AMC99_RS07310 fb01847a60684f96bfbefb78852285ac 709 PANTHER PTHR11804:SF47 26 704 0.0 T 20-04-2016 AMC99_RS07310 fb01847a60684f96bfbefb78852285ac 709 Gene3D G3DSA:1.10.1370.10 163 369 1.8E-101 T 20-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AMC99_RS07310 fb01847a60684f96bfbefb78852285ac 709 Gene3D G3DSA:1.10.1370.10 522 703 1.8E-101 T 20-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AMC99_RS07310 fb01847a60684f96bfbefb78852285ac 709 Gene3D G3DSA:3.40.390.10 381 521 1.2E-47 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMC99_RS07310 fb01847a60684f96bfbefb78852285ac 709 Pfam PF01432 Peptidase family M3 250 700 2.2E-118 T 20-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 AMC99_RS07310 fb01847a60684f96bfbefb78852285ac 709 PANTHER PTHR11804 26 704 0.0 T 20-04-2016 AMC99_RS07445 81e10e706c4b161baa90960d9b74006b 174 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 151 20.547 T 20-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AMC99_RS07445 81e10e706c4b161baa90960d9b74006b 174 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 149 1.3E-43 T 20-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMC99_RS07445 81e10e706c4b161baa90960d9b74006b 174 PANTHER PTHR12934 1 151 6.3E-66 T 20-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMC99_RS07445 81e10e706c4b161baa90960d9b74006b 174 SUPERFAMILY SSF52080 4 150 1.57E-42 T 20-04-2016 IPR021131 Ribosomal protein L18e/L15P AMC99_RS07445 81e10e706c4b161baa90960d9b74006b 174 Gene3D G3DSA:3.100.10.10 32 158 4.2E-26 T 20-04-2016 AMC99_RS07445 81e10e706c4b161baa90960d9b74006b 174 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 149 1.8E-34 T 20-04-2016 IPR021131 Ribosomal protein L18e/L15P AMC99_RS01940 a5d2207a575e74ed7744752bb80fd890 162 Pfam PF01042 Endoribonuclease L-PSP 40 151 1.2E-18 T 20-04-2016 IPR006175 YjgF/YER057c/UK114 family AMC99_RS01940 a5d2207a575e74ed7744752bb80fd890 162 SUPERFAMILY SSF55298 39 154 1.56E-24 T 20-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMC99_RS01940 a5d2207a575e74ed7744752bb80fd890 162 PANTHER PTHR11803 47 161 1.4E-21 T 20-04-2016 IPR006175 YjgF/YER057c/UK114 family AMC99_RS01940 a5d2207a575e74ed7744752bb80fd890 162 Gene3D G3DSA:3.30.1330.40 39 155 5.4E-28 T 20-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMC99_RS06620 176a58ca45fc448b93f0f7885f9d8310 302 Gene3D G3DSA:3.40.50.150 113 293 9.9E-27 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS06620 176a58ca45fc448b93f0f7885f9d8310 302 SUPERFAMILY SSF53335 42 298 1.53E-31 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS06620 176a58ca45fc448b93f0f7885f9d8310 302 PANTHER PTHR18895:SF3 64 302 3.4E-45 T 20-04-2016 AMC99_RS06620 176a58ca45fc448b93f0f7885f9d8310 302 PANTHER PTHR18895 64 302 3.4E-45 T 20-04-2016 AMC99_RS06620 176a58ca45fc448b93f0f7885f9d8310 302 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 45 298 3.2E-47 T 20-04-2016 AMC99_RS11555 bd04a4c66c6b8296f1d74d1d7cd49468 411 Pfam PF06850 PHB de-polymerase C-terminus 209 410 1.9E-91 T 20-04-2016 IPR009656 PHB de-polymerase, C-terminal AMC99_RS11555 bd04a4c66c6b8296f1d74d1d7cd49468 411 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 410 9.6E-164 T 20-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase AMC99_RS11555 bd04a4c66c6b8296f1d74d1d7cd49468 411 PIRSF PIRSF020818 1 411 8.3E-171 T 20-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase AMC99_RS11555 bd04a4c66c6b8296f1d74d1d7cd49468 411 SUPERFAMILY SSF53474 97 407 1.52E-31 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS11555 bd04a4c66c6b8296f1d74d1d7cd49468 411 Gene3D G3DSA:3.40.50.1820 99 410 6.4E-14 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS03635 2eda71ad329c75a54204847404a1327b 126 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 23 120 7.5E-38 T 20-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AMC99_RS03635 2eda71ad329c75a54204847404a1327b 126 SMART SM00992 22 121 3.5E-55 T 20-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AMC99_RS03635 2eda71ad329c75a54204847404a1327b 126 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 24 116 4.6E-27 T 20-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AMC99_RS03635 2eda71ad329c75a54204847404a1327b 126 PANTHER PTHR31350:SF6 1 124 1.6E-33 T 20-04-2016 AMC99_RS03635 2eda71ad329c75a54204847404a1327b 126 PANTHER PTHR31350 1 124 1.6E-33 T 20-04-2016 AMC99_RS03635 2eda71ad329c75a54204847404a1327b 126 SUPERFAMILY SSF141255 23 115 4.45E-35 T 20-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AMC99_RS07730 8e2ce444308cfe4c4931b1c798571d48 379 SUPERFAMILY SSF53448 21 189 5.69E-28 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS07730 8e2ce444308cfe4c4931b1c798571d48 379 Pfam PF04138 GtrA-like protein 259 376 2.7E-18 T 20-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 AMC99_RS07730 8e2ce444308cfe4c4931b1c798571d48 379 PANTHER PTHR10859 2 309 4.4E-56 T 20-04-2016 AMC99_RS07730 8e2ce444308cfe4c4931b1c798571d48 379 PANTHER PTHR10859:SF37 2 309 4.4E-56 T 20-04-2016 AMC99_RS07730 8e2ce444308cfe4c4931b1c798571d48 379 Gene3D G3DSA:3.90.550.10 21 138 1.8E-19 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS07730 8e2ce444308cfe4c4931b1c798571d48 379 Pfam PF00535 Glycosyl transferase family 2 23 167 8.9E-26 T 20-04-2016 IPR001173 Glycosyltransferase 2-like AMC99_RS09845 6be5056686a0c9da649137e67af92ab2 628 Pfam PF01343 Peptidase family S49 126 281 6.8E-20 T 20-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMC99_RS09845 6be5056686a0c9da649137e67af92ab2 628 Pfam PF01343 Peptidase family S49 378 528 1.4E-42 T 20-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMC99_RS09845 6be5056686a0c9da649137e67af92ab2 628 Gene3D G3DSA:3.90.226.10 23 161 8.8E-41 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS09845 6be5056686a0c9da649137e67af92ab2 628 Gene3D G3DSA:3.90.226.10 308 417 5.6E-53 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS09845 6be5056686a0c9da649137e67af92ab2 628 Gene3D G3DSA:3.90.226.10 204 294 8.8E-41 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS09845 6be5056686a0c9da649137e67af92ab2 628 Gene3D G3DSA:3.90.226.10 455 536 5.6E-53 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS09845 6be5056686a0c9da649137e67af92ab2 628 PANTHER PTHR33209 2 560 1.0E-136 T 20-04-2016 AMC99_RS09845 6be5056686a0c9da649137e67af92ab2 628 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 339 524 2.1E-46 T 20-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AMC99_RS09845 6be5056686a0c9da649137e67af92ab2 628 SUPERFAMILY SSF52096 196 269 1.49E-21 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS09845 6be5056686a0c9da649137e67af92ab2 628 SUPERFAMILY SSF52096 26 165 1.49E-21 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS09845 6be5056686a0c9da649137e67af92ab2 628 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 20 589 8.6E-147 T 20-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AMC99_RS09845 6be5056686a0c9da649137e67af92ab2 628 SUPERFAMILY SSF52096 454 515 3.73E-36 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS09845 6be5056686a0c9da649137e67af92ab2 628 PANTHER PTHR33209:SF1 2 560 1.0E-136 T 20-04-2016 AMC99_RS09845 6be5056686a0c9da649137e67af92ab2 628 SUPERFAMILY SSF52096 312 425 3.73E-36 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS09845 6be5056686a0c9da649137e67af92ab2 628 PIRSF PIRSF001217 1 605 1.8E-157 T 20-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AMC99_RS01845 c5ede687f913cb55041958f1139ff45b 193 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 3 179 2.1E-56 T 20-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AMC99_RS01845 c5ede687f913cb55041958f1139ff45b 193 PANTHER PTHR31223:SF0 1 181 7.3E-75 T 20-04-2016 AMC99_RS01845 c5ede687f913cb55041958f1139ff45b 193 SUPERFAMILY SSF102405 2 179 5.95E-58 T 20-04-2016 AMC99_RS01845 c5ede687f913cb55041958f1139ff45b 193 Pfam PF03641 Possible lysine decarboxylase 46 176 2.1E-39 T 20-04-2016 IPR031100 LOG family AMC99_RS01845 c5ede687f913cb55041958f1139ff45b 193 Gene3D G3DSA:3.40.50.450 2 183 2.6E-64 T 20-04-2016 AMC99_RS01845 c5ede687f913cb55041958f1139ff45b 193 PANTHER PTHR31223 1 181 7.3E-75 T 20-04-2016 AMC99_RS06310 0e1a4a75097ff7dbbc54f88dc50243ea 377 PANTHER PTHR35894:SF1 2 366 3.1E-63 T 20-04-2016 AMC99_RS06310 0e1a4a75097ff7dbbc54f88dc50243ea 377 SUPERFAMILY SSF52540 6 265 3.6E-28 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06310 0e1a4a75097ff7dbbc54f88dc50243ea 377 PANTHER PTHR35894 2 366 3.1E-63 T 20-04-2016 AMC99_RS06310 0e1a4a75097ff7dbbc54f88dc50243ea 377 Gene3D G3DSA:3.40.50.300 111 212 1.9E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06310 0e1a4a75097ff7dbbc54f88dc50243ea 377 TIGRFAM TIGR03015 pepcterm_ATPase: putative secretion ATPase, PEP-CTERM locus subfamily 1 268 4.7E-99 T 20-04-2016 IPR017466 ATPase, secretion system, PEP-CTERM, predicted AMC99_RS06310 0e1a4a75097ff7dbbc54f88dc50243ea 377 Gene3D G3DSA:3.40.50.300 45 87 1.1E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06310 0e1a4a75097ff7dbbc54f88dc50243ea 377 Pfam PF13401 AAA domain 42 170 3.5E-15 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS07485 0a7e1430f0282a06f5c58c45977ed539 192 PIRSF PIRSF002161 2 190 3.2E-69 T 20-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07485 0a7e1430f0282a06f5c58c45977ed539 192 Gene3D G3DSA:3.30.1440.10 6 182 2.5E-79 T 20-04-2016 IPR022803 Ribosomal protein L5 domain AMC99_RS07485 0a7e1430f0282a06f5c58c45977ed539 192 PANTHER PTHR11994 2 181 1.6E-96 T 20-04-2016 AMC99_RS07485 0a7e1430f0282a06f5c58c45977ed539 192 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 5 183 43.697 T 20-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07485 0a7e1430f0282a06f5c58c45977ed539 192 ProSitePatterns PS00358 Ribosomal protein L5 signature. 61 77 - T 20-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07485 0a7e1430f0282a06f5c58c45977ed539 192 SUPERFAMILY SSF55282 7 181 1.6E-78 T 20-04-2016 IPR022803 Ribosomal protein L5 domain AMC99_RS07485 0a7e1430f0282a06f5c58c45977ed539 192 Pfam PF00673 ribosomal L5P family C-terminus 88 181 7.8E-42 T 20-04-2016 IPR031309 Ribosomal protein L5, C-terminal AMC99_RS07485 0a7e1430f0282a06f5c58c45977ed539 192 Pfam PF00281 Ribosomal protein L5 28 84 1.6E-27 T 20-04-2016 IPR031310 Ribosomal protein L5, N-terminal AMC99_RS12625 0c7c41353a5beceeeb48370c19489d67 213 PANTHER PTHR39321 1 150 3.0E-29 T 20-04-2016 AMC99_RS12625 0c7c41353a5beceeeb48370c19489d67 213 Gene3D G3DSA:3.40.50.620 1 185 5.1E-38 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS12625 0c7c41353a5beceeeb48370c19489d67 213 Pfam PF01467 Cytidylyltransferase-like 5 184 2.4E-16 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMC99_RS12625 0c7c41353a5beceeeb48370c19489d67 213 SUPERFAMILY SSF52374 1 185 2.0E-36 T 20-04-2016 AMC99_RS12625 0c7c41353a5beceeeb48370c19489d67 213 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 213 19.53 T 20-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 AMC99_RS04525 ee0ffca9179af22d164c36a40511f8c8 369 Gene3D G3DSA:3.40.50.1970 3 173 1.3E-59 T 20-04-2016 AMC99_RS04525 ee0ffca9179af22d164c36a40511f8c8 369 PIRSF PIRSF001455 9 368 4.3E-103 T 20-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMC99_RS04525 ee0ffca9179af22d164c36a40511f8c8 369 PANTHER PTHR21090 1 367 3.7E-145 T 20-04-2016 AMC99_RS04525 ee0ffca9179af22d164c36a40511f8c8 369 Gene3D G3DSA:1.20.1090.10 174 363 1.9E-62 T 20-04-2016 AMC99_RS04525 ee0ffca9179af22d164c36a40511f8c8 369 SUPERFAMILY SSF56796 6 363 2.22E-105 T 20-04-2016 AMC99_RS04525 ee0ffca9179af22d164c36a40511f8c8 369 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 357 1.5E-106 T 20-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMC99_RS04525 ee0ffca9179af22d164c36a40511f8c8 369 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 364 39.094 T 20-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMC99_RS04525 ee0ffca9179af22d164c36a40511f8c8 369 Pfam PF01761 3-dehydroquinate synthase 68 331 1.5E-95 T 20-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMC99_RS09430 1a0e851767dddb6a6207fcab700d6483 291 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 272 7.9E-59 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMC99_RS09430 1a0e851767dddb6a6207fcab700d6483 291 PANTHER PTHR11941:SF95 1 270 2.0E-93 T 20-04-2016 AMC99_RS09430 1a0e851767dddb6a6207fcab700d6483 291 Gene3D G3DSA:3.90.226.10 2 270 5.0E-77 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS09430 1a0e851767dddb6a6207fcab700d6483 291 PANTHER PTHR11941 1 270 2.0E-93 T 20-04-2016 AMC99_RS09430 1a0e851767dddb6a6207fcab700d6483 291 SUPERFAMILY SSF52096 3 272 2.4E-77 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS08780 0118ba3a7763aba6dd99d3a2e193dc69 265 PANTHER PTHR35330 2 205 1.2E-18 T 20-04-2016 AMC99_RS08780 0118ba3a7763aba6dd99d3a2e193dc69 265 SUPERFAMILY SSF75615 92 181 1.03E-17 T 20-04-2016 AMC99_RS08780 0118ba3a7763aba6dd99d3a2e193dc69 265 SUPERFAMILY SSF51735 2 90 8.27E-5 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08780 0118ba3a7763aba6dd99d3a2e193dc69 265 Pfam PF13241 Putative NAD(P)-binding 7 93 8.6E-6 T 20-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMC99_RS08780 0118ba3a7763aba6dd99d3a2e193dc69 265 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 44 161 5.2E-26 T 20-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMC99_RS08780 0118ba3a7763aba6dd99d3a2e193dc69 265 Gene3D G3DSA:3.40.50.720 48 90 6.0E-4 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08780 0118ba3a7763aba6dd99d3a2e193dc69 265 Gene3D G3DSA:3.40.50.720 4 40 9.7E-5 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08780 0118ba3a7763aba6dd99d3a2e193dc69 265 Gene3D G3DSA:3.30.160.110 91 126 6.7E-14 T 20-04-2016 AMC99_RS08780 0118ba3a7763aba6dd99d3a2e193dc69 265 SUPERFAMILY SSF53790 201 250 2.62E-6 T 20-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMC99_RS08780 0118ba3a7763aba6dd99d3a2e193dc69 265 Gene3D G3DSA:3.40.1010.10 200 249 1.2E-6 T 20-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 AMC99_RS06270 8ad7b7153b48a41059ff632c47e71184 371 Pfam PF03969 AFG1-like ATPase 6 364 3.6E-113 T 20-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 AMC99_RS06270 8ad7b7153b48a41059ff632c47e71184 371 SUPERFAMILY SSF52540 51 185 2.83E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06270 8ad7b7153b48a41059ff632c47e71184 371 PANTHER PTHR12169 1 367 2.5E-126 T 20-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 AMC99_RS06270 8ad7b7153b48a41059ff632c47e71184 371 Gene3D G3DSA:3.40.50.300 46 170 1.3E-16 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08075 6f45849f6c180a54f1cd1c9ce5814c8b 143 SUPERFAMILY SSF46785 31 135 3.16E-31 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS08075 6f45849f6c180a54f1cd1c9ce5814c8b 143 PANTHER PTHR33204 18 143 8.6E-49 T 20-04-2016 AMC99_RS08075 6f45849f6c180a54f1cd1c9ce5814c8b 143 Gene3D G3DSA:1.10.10.10 28 138 4.4E-42 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS08075 6f45849f6c180a54f1cd1c9ce5814c8b 143 Pfam PF01638 HxlR-like helix-turn-helix 41 126 5.8E-29 T 20-04-2016 IPR002577 Helix-turn-helix, HxlR type AMC99_RS08075 6f45849f6c180a54f1cd1c9ce5814c8b 143 PANTHER PTHR33204:SF6 18 143 8.6E-49 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 325 8.5E-66 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PANTHER PTHR22912 1 463 3.2E-196 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 Gene3D G3DSA:3.50.50.60 139 334 3.0E-51 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.8E-36 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 3.8E-36 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 3.8E-36 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 3.8E-36 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 3.8E-36 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 20-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 SUPERFAMILY SSF55424 347 469 4.81E-39 T 20-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 SUPERFAMILY SSF51905 1 336 2.99E-63 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 Gene3D G3DSA:3.30.390.30 342 468 2.0E-45 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 Gene3D G3DSA:3.50.50.60 4 138 1.6E-43 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PIRSF PIRSF000350 1 464 4.6E-77 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 470 1.0E-164 T 20-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 8.1E-65 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 8.1E-65 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 8.1E-65 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 8.1E-65 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 8.1E-65 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 347 368 8.1E-65 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 8.1E-65 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 8.1E-65 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.1E-65 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 PANTHER PTHR22912:SF125 1 463 3.2E-196 T 20-04-2016 AMC99_RS05705 bcd54410a28016608511db8ce899645d 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 351 459 1.7E-36 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMC99_RS13515 39676ab541440cdddd5f50918cbe7052 259 SUPERFAMILY SSF52540 23 254 5.44E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS13515 39676ab541440cdddd5f50918cbe7052 259 Gene3D G3DSA:3.40.50.300 20 250 9.1E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS13515 39676ab541440cdddd5f50918cbe7052 259 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 23 259 1.7E-108 T 20-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AMC99_RS13515 39676ab541440cdddd5f50918cbe7052 259 SMART SM00382 47 234 2.5E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS13515 39676ab541440cdddd5f50918cbe7052 259 PANTHER PTHR24220:SF497 24 255 3.7E-133 T 20-04-2016 AMC99_RS13515 39676ab541440cdddd5f50918cbe7052 259 Pfam PF00005 ABC transporter 38 184 1.0E-32 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS13515 39676ab541440cdddd5f50918cbe7052 259 PANTHER PTHR24220 24 255 3.7E-133 T 20-04-2016 AMC99_RS10840 50dbfefbde5775a325d567e8a4dee6fd 533 SUPERFAMILY SSF51905 1 407 6.17E-51 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS10840 50dbfefbde5775a325d567e8a4dee6fd 533 Pfam PF01593 Flavin containing amine oxidoreductase 16 326 1.5E-14 T 20-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMC99_RS10840 50dbfefbde5775a325d567e8a4dee6fd 533 Gene3D G3DSA:3.50.50.60 1 70 4.3E-34 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS10840 50dbfefbde5775a325d567e8a4dee6fd 533 Gene3D G3DSA:3.50.50.60 217 312 4.3E-34 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS10840 50dbfefbde5775a325d567e8a4dee6fd 533 PANTHER PTHR10668 1 525 1.7E-189 T 20-04-2016 AMC99_RS10840 50dbfefbde5775a325d567e8a4dee6fd 533 PANTHER PTHR10668:SF83 1 525 1.7E-189 T 20-04-2016 AMC99_RS03480 90a3a609f3896fd58afb6a07701dabee 557 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 99 267 1.6E-36 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS03480 90a3a609f3896fd58afb6a07701dabee 557 Gene3D G3DSA:3.20.20.450 282 527 3.4E-80 T 20-04-2016 IPR001633 EAL domain AMC99_RS03480 90a3a609f3896fd58afb6a07701dabee 557 SUPERFAMILY SSF141868 286 526 6.02E-78 T 20-04-2016 IPR001633 EAL domain AMC99_RS03480 90a3a609f3896fd58afb6a07701dabee 557 PANTHER PTHR33121:SF13 238 529 3.3E-70 T 20-04-2016 AMC99_RS03480 90a3a609f3896fd58afb6a07701dabee 557 SMART SM00267 90 269 9.5E-50 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS03480 90a3a609f3896fd58afb6a07701dabee 557 PANTHER PTHR33121 238 529 3.3E-70 T 20-04-2016 AMC99_RS03480 90a3a609f3896fd58afb6a07701dabee 557 SUPERFAMILY SSF55073 106 271 4.55E-42 T 20-04-2016 IPR029787 Nucleotide cyclase AMC99_RS03480 90a3a609f3896fd58afb6a07701dabee 557 Gene3D G3DSA:3.30.70.270 103 276 1.9E-48 T 20-04-2016 AMC99_RS03480 90a3a609f3896fd58afb6a07701dabee 557 SMART SM00052 279 521 1.6E-89 T 20-04-2016 IPR001633 EAL domain AMC99_RS03480 90a3a609f3896fd58afb6a07701dabee 557 Pfam PF00563 EAL domain 287 516 1.6E-66 T 20-04-2016 IPR001633 EAL domain AMC99_RS03480 90a3a609f3896fd58afb6a07701dabee 557 Pfam PF00990 Diguanylate cyclase, GGDEF domain 101 265 2.2E-40 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS12205 31b2b2a40e3f5313ba84866b0e88c53a 341 PANTHER PTHR11938:SF47 1 341 2.7E-105 T 20-04-2016 AMC99_RS12205 31b2b2a40e3f5313ba84866b0e88c53a 341 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 75 94 - T 20-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 AMC99_RS12205 31b2b2a40e3f5313ba84866b0e88c53a 341 SUPERFAMILY SSF51395 3 340 1.22E-103 T 20-04-2016 AMC99_RS12205 31b2b2a40e3f5313ba84866b0e88c53a 341 PANTHER PTHR11938 1 341 2.7E-105 T 20-04-2016 AMC99_RS12205 31b2b2a40e3f5313ba84866b0e88c53a 341 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 5 340 4.5E-116 T 20-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS12205 31b2b2a40e3f5313ba84866b0e88c53a 341 Gene3D G3DSA:3.20.20.70 4 340 8.9E-128 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS12205 31b2b2a40e3f5313ba84866b0e88c53a 341 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 322 41.77 T 20-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS12205 31b2b2a40e3f5313ba84866b0e88c53a 341 Pfam PF01180 Dihydroorotate dehydrogenase 40 326 6.4E-96 T 20-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AMC99_RS12205 31b2b2a40e3f5313ba84866b0e88c53a 341 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 278 298 - T 20-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 AMC99_RS12205 31b2b2a40e3f5313ba84866b0e88c53a 341 PIRSF PIRSF000164 11 341 2.8E-104 T 20-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 AMC99_RS08085 02324be32729f0f71117d76a23d3c229 520 PANTHER PTHR38657 1 514 8.6E-213 T 20-04-2016 AMC99_RS08085 02324be32729f0f71117d76a23d3c229 520 Gene3D G3DSA:1.25.40.80 146 164 3.5E-12 T 20-04-2016 AMC99_RS08085 02324be32729f0f71117d76a23d3c229 520 Gene3D G3DSA:1.25.40.80 230 315 3.5E-12 T 20-04-2016 AMC99_RS08085 02324be32729f0f71117d76a23d3c229 520 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 9 230 2.7E-83 T 20-04-2016 IPR007357 Deoxyribodipyrimidine photolyase-related protein AMC99_RS08085 02324be32729f0f71117d76a23d3c229 520 SUPERFAMILY SSF48173 231 494 4.84E-56 T 20-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain AMC99_RS08085 02324be32729f0f71117d76a23d3c229 520 PANTHER PTHR38657:SF1 1 514 8.6E-213 T 20-04-2016 AMC99_RS08085 02324be32729f0f71117d76a23d3c229 520 Gene3D G3DSA:1.10.579.10 316 446 4.2E-4 T 20-04-2016 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 250 263 - T 20-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 468 485 - T 20-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 SUPERFAMILY SSF53697 13 507 6.39E-144 T 20-04-2016 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 Gene3D G3DSA:1.10.1390.10 478 508 9.4E-11 T 20-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 Gene3D G3DSA:3.40.50.10490 278 477 4.4E-88 T 20-04-2016 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 Gene3D G3DSA:3.40.50.10490 14 97 4.4E-88 T 20-04-2016 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 45 495 34.038 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 Gene3D G3DSA:3.40.50.10490 105 276 1.5E-46 T 20-04-2016 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 PANTHER PTHR11469 8 506 7.7E-150 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 Pfam PF00342 Phosphoglucose isomerase 51 505 6.4E-161 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 PRINTS PR00662 Glucose-6-phosphate isomerase signature 436 454 9.1E-39 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 PRINTS PR00662 Glucose-6-phosphate isomerase signature 137 156 9.1E-39 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 PRINTS PR00662 Glucose-6-phosphate isomerase signature 246 264 9.1E-39 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 PRINTS PR00662 Glucose-6-phosphate isomerase signature 468 481 9.1E-39 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 PRINTS PR00662 Glucose-6-phosphate isomerase signature 323 344 9.1E-39 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMC99_RS04435 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 PRINTS PR00662 Glucose-6-phosphate isomerase signature 454 468 9.1E-39 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 PANTHER PTHR11946 2 521 9.5E-228 T 20-04-2016 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 Pfam PF09334 tRNA synthetases class I (M) 5 365 1.0E-104 T 20-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 Gene3D G3DSA:2.170.220.10 116 227 1.5E-45 T 20-04-2016 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 486 5.2E-144 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 Gene3D G3DSA:3.40.50.620 228 338 2.0E-70 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 Gene3D G3DSA:3.40.50.620 2 113 2.0E-70 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 23 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 PANTHER PTHR11946:SF1 2 521 9.5E-228 T 20-04-2016 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 SUPERFAMILY SSF47323 357 519 1.85E-35 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 4.6E-32 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 259 274 4.6E-32 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 352 363 4.6E-32 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 226 237 4.6E-32 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 4.6E-32 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 4.6E-32 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 Gene3D G3DSA:1.10.730.10 342 514 3.8E-48 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 513 44.769 T 20-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMC99_RS05745 6df3804987a2e221f76a46cbb61ca146 522 SUPERFAMILY SSF52374 2 350 9.92E-108 T 20-04-2016 AMC99_RS09665 549d8acc30c4836a0131a5d69f020fa0 406 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 16 396 21.868 T 20-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMC99_RS09665 549d8acc30c4836a0131a5d69f020fa0 406 PANTHER PTHR30341 15 404 2.8E-149 T 20-04-2016 AMC99_RS09665 549d8acc30c4836a0131a5d69f020fa0 406 Gene3D G3DSA:1.20.1530.10 16 395 3.5E-141 T 20-04-2016 IPR023171 Na/H antiporter domain AMC99_RS09665 549d8acc30c4836a0131a5d69f020fa0 406 Pfam PF06965 Na+/H+ antiporter 1 20 390 8.9E-136 T 20-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMC99_RS09665 549d8acc30c4836a0131a5d69f020fa0 406 PANTHER PTHR30341:SF0 15 404 2.8E-149 T 20-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMC99_RS09665 549d8acc30c4836a0131a5d69f020fa0 406 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 20 390 4.6E-130 T 20-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMC99_RS12440 baa40bea153cbfc036fb581f7a87da9e 623 Pfam PF13932 GidA associated domain 399 609 2.2E-48 T 20-04-2016 IPR026904 GidA associated domain 3 AMC99_RS12440 baa40bea153cbfc036fb581f7a87da9e 623 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 269 283 - T 20-04-2016 IPR020595 MnmG-related, conserved site AMC99_RS12440 baa40bea153cbfc036fb581f7a87da9e 623 PANTHER PTHR11806:SF0 2 622 2.0E-277 T 20-04-2016 AMC99_RS12440 baa40bea153cbfc036fb581f7a87da9e 623 SUPERFAMILY SSF51905 94 257 4.87E-42 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS12440 baa40bea153cbfc036fb581f7a87da9e 623 SUPERFAMILY SSF51905 3 63 4.87E-42 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS12440 baa40bea153cbfc036fb581f7a87da9e 623 PANTHER PTHR11806 2 622 2.0E-277 T 20-04-2016 AMC99_RS12440 baa40bea153cbfc036fb581f7a87da9e 623 Gene3D G3DSA:3.50.50.60 4 227 3.9E-31 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS12440 baa40bea153cbfc036fb581f7a87da9e 623 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4 614 8.3E-205 T 20-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AMC99_RS12440 baa40bea153cbfc036fb581f7a87da9e 623 SMART SM01228 539 610 4.0E-30 T 20-04-2016 AMC99_RS12440 baa40bea153cbfc036fb581f7a87da9e 623 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 2 617 37.07 T 20-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AMC99_RS12440 baa40bea153cbfc036fb581f7a87da9e 623 Pfam PF01134 Glucose inhibited division protein A 5 395 4.5E-144 T 20-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 Gene3D G3DSA:3.40.50.1370 2 144 1.4E-53 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 Gene3D G3DSA:3.40.50.1370 145 292 1.4E-56 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 2 306 75.894 T 20-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 148 2.5E-48 T 20-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 2.7E-25 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.7E-25 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 2.7E-25 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 258 267 2.7E-25 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 PANTHER PTHR11405:SF1 2 307 3.4E-129 T 20-04-2016 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 7.4E-49 T 20-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 PANTHER PTHR11405 2 307 3.4E-129 T 20-04-2016 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 223 233 2.6E-31 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 2.6E-31 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 2.6E-31 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 284 295 2.6E-31 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 2.6E-31 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 SUPERFAMILY SSF53671 2 306 1.57E-102 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_RS13265 332cfa57d04b52ba9f8427261a67a4ee 309 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 3 305 2.7E-113 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMC99_RS01305 ce299458dd9788701e9474c097c43a10 347 SUPERFAMILY SSF52540 21 251 2.55E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS01305 ce299458dd9788701e9474c097c43a10 347 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 326 6.0E-31 T 20-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMC99_RS01305 ce299458dd9788701e9474c097c43a10 347 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 5.8E-30 T 20-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMC99_RS01305 ce299458dd9788701e9474c097c43a10 347 SUPERFAMILY SSF46785 257 331 8.94E-23 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01305 ce299458dd9788701e9474c097c43a10 347 PANTHER PTHR13779:SF25 11 331 1.5E-160 T 20-04-2016 AMC99_RS01305 ce299458dd9788701e9474c097c43a10 347 Gene3D G3DSA:1.10.8.60 183 256 3.5E-30 T 20-04-2016 AMC99_RS01305 ce299458dd9788701e9474c097c43a10 347 Gene3D G3DSA:1.10.10.10 258 328 2.0E-30 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01305 ce299458dd9788701e9474c097c43a10 347 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 347 164.765 T 20-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMC99_RS01305 ce299458dd9788701e9474c097c43a10 347 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 327 3.2E-132 T 20-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMC99_RS01305 ce299458dd9788701e9474c097c43a10 347 PANTHER PTHR13779 11 331 1.5E-160 T 20-04-2016 AMC99_RS01305 ce299458dd9788701e9474c097c43a10 347 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 14 236 2.0E-111 T 20-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AMC99_RS01305 ce299458dd9788701e9474c097c43a10 347 Gene3D G3DSA:3.40.50.300 21 178 1.9E-33 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS01305 ce299458dd9788701e9474c097c43a10 347 SMART SM00382 52 179 2.9E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS12825 33aae62b4800693859bf6429d6f516fa 384 PANTHER PTHR11933:SF10 24 381 6.5E-146 T 20-04-2016 AMC99_RS12825 33aae62b4800693859bf6429d6f516fa 384 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 26 378 37.668 T 20-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AMC99_RS12825 33aae62b4800693859bf6429d6f516fa 384 Gene3D G3DSA:2.30.30.280 241 297 7.5E-18 T 20-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 AMC99_RS12825 33aae62b4800693859bf6429d6f516fa 384 PANTHER PTHR11933 24 381 6.5E-146 T 20-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AMC99_RS12825 33aae62b4800693859bf6429d6f516fa 384 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 27 377 3.5E-93 T 20-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AMC99_RS12825 33aae62b4800693859bf6429d6f516fa 384 Pfam PF03054 tRNA methyl transferase 27 377 7.8E-106 T 20-04-2016 AMC99_RS12825 33aae62b4800693859bf6429d6f516fa 384 Gene3D G3DSA:2.40.30.10 315 380 3.2E-18 T 20-04-2016 AMC99_RS12825 33aae62b4800693859bf6429d6f516fa 384 Gene3D G3DSA:3.40.50.620 22 233 6.5E-77 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS12825 33aae62b4800693859bf6429d6f516fa 384 SUPERFAMILY SSF52402 25 269 1.1E-46 T 20-04-2016 AMC99_RS09110 d94cbc51832c0ae7630831ef6d9af8c1 407 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 195 360 8.4E-42 T 20-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS09110 d94cbc51832c0ae7630831ef6d9af8c1 407 PANTHER PTHR21015:SF22 14 382 3.4E-81 T 20-04-2016 AMC99_RS09110 d94cbc51832c0ae7630831ef6d9af8c1 407 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 14 148 3.9E-30 T 20-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS09110 d94cbc51832c0ae7630831ef6d9af8c1 407 Gene3D G3DSA:3.40.50.2000 14 48 6.9E-5 T 20-04-2016 AMC99_RS09110 d94cbc51832c0ae7630831ef6d9af8c1 407 Gene3D G3DSA:3.40.50.2000 164 350 1.0E-52 T 20-04-2016 AMC99_RS09110 d94cbc51832c0ae7630831ef6d9af8c1 407 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 13 369 31.092 T 20-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS09110 d94cbc51832c0ae7630831ef6d9af8c1 407 SUPERFAMILY SSF53756 12 368 8.25E-96 T 20-04-2016 AMC99_RS09110 d94cbc51832c0ae7630831ef6d9af8c1 407 PANTHER PTHR21015 14 382 3.4E-81 T 20-04-2016 AMC99_RS09110 d94cbc51832c0ae7630831ef6d9af8c1 407 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 14 364 3.7E-84 T 20-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS13255 30c7fa3b81fa1ee1dd3685216aef833e 255 PANTHER PTHR11544 102 225 3.3E-14 T 20-04-2016 AMC99_RS13255 30c7fa3b81fa1ee1dd3685216aef833e 255 SMART SM00357 188 253 1.6E-13 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 AMC99_RS13255 30c7fa3b81fa1ee1dd3685216aef833e 255 SMART SM00357 101 165 1.7E-19 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 AMC99_RS13255 30c7fa3b81fa1ee1dd3685216aef833e 255 Gene3D G3DSA:2.40.50.140 101 164 1.4E-20 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS13255 30c7fa3b81fa1ee1dd3685216aef833e 255 Gene3D G3DSA:2.40.50.140 188 251 1.6E-20 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS13255 30c7fa3b81fa1ee1dd3685216aef833e 255 ProSitePatterns PS00352 'Cold-shock' domain signature. 113 132 - T 20-04-2016 IPR019844 Cold-shock conserved site AMC99_RS13255 30c7fa3b81fa1ee1dd3685216aef833e 255 SUPERFAMILY SSF50249 101 164 2.57E-17 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS13255 30c7fa3b81fa1ee1dd3685216aef833e 255 SUPERFAMILY SSF50249 185 252 1.2E-16 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS13255 30c7fa3b81fa1ee1dd3685216aef833e 255 Pfam PF00313 'Cold-shock' DNA-binding domain 189 251 1.7E-15 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_RS13255 30c7fa3b81fa1ee1dd3685216aef833e 255 Pfam PF00313 'Cold-shock' DNA-binding domain 101 163 2.6E-19 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_RS13255 30c7fa3b81fa1ee1dd3685216aef833e 255 PRINTS PR00050 Cold shock protein signature 210 219 2.3E-9 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_RS13255 30c7fa3b81fa1ee1dd3685216aef833e 255 PRINTS PR00050 Cold shock protein signature 189 204 2.3E-9 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_RS13255 30c7fa3b81fa1ee1dd3685216aef833e 255 PRINTS PR00050 Cold shock protein signature 225 243 2.3E-9 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_RS13255 30c7fa3b81fa1ee1dd3685216aef833e 255 PANTHER PTHR11544:SF43 102 225 3.3E-14 T 20-04-2016 AMC99_RS12055 167dd803ccf8bd61cf17f524feb4a3b3 265 SMART SM00850 168 265 9.7E-34 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 AMC99_RS12055 167dd803ccf8bd61cf17f524feb4a3b3 265 SMART SM00448 3 113 2.4E-24 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS12055 167dd803ccf8bd61cf17f524feb4a3b3 265 PANTHER PTHR37299:SF1 160 262 7.8E-29 T 20-04-2016 AMC99_RS12055 167dd803ccf8bd61cf17f524feb4a3b3 265 Pfam PF04397 LytTr DNA-binding domain 169 258 1.2E-23 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 AMC99_RS12055 167dd803ccf8bd61cf17f524feb4a3b3 265 PANTHER PTHR37299 160 262 7.8E-29 T 20-04-2016 AMC99_RS12055 167dd803ccf8bd61cf17f524feb4a3b3 265 Pfam PF00072 Response regulator receiver domain 6 113 1.6E-21 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS12055 167dd803ccf8bd61cf17f524feb4a3b3 265 SUPERFAMILY SSF52172 4 120 5.69E-30 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS12055 167dd803ccf8bd61cf17f524feb4a3b3 265 Gene3D G3DSA:3.40.50.2300 2 127 1.2E-30 T 20-04-2016 AMC99_RS12055 167dd803ccf8bd61cf17f524feb4a3b3 265 Gene3D G3DSA:2.40.50.40 159 227 3.5E-20 T 20-04-2016 AMC99_RS12055 167dd803ccf8bd61cf17f524feb4a3b3 265 Gene3D G3DSA:2.20.25.10 229 256 6.5E-4 T 20-04-2016 AMC99_RS06860 b78f72ce380589b7b6d0b893f2055d05 147 SUPERFAMILY SSF46785 3 138 6.83E-33 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS06860 b78f72ce380589b7b6d0b893f2055d05 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 1.8E-10 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS06860 b78f72ce380589b7b6d0b893f2055d05 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 1.8E-10 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS06860 b78f72ce380589b7b6d0b893f2055d05 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 1.8E-10 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS06860 b78f72ce380589b7b6d0b893f2055d05 147 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 20-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site AMC99_RS06860 b78f72ce380589b7b6d0b893f2055d05 147 SMART SM00347 22 122 1.7E-25 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS06860 b78f72ce380589b7b6d0b893f2055d05 147 PANTHER PTHR33164 1 146 1.6E-28 T 20-04-2016 AMC99_RS06860 b78f72ce380589b7b6d0b893f2055d05 147 Pfam PF01047 MarR family 29 86 6.0E-15 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS06860 b78f72ce380589b7b6d0b893f2055d05 147 Gene3D G3DSA:1.10.10.10 4 137 2.6E-37 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS02560 fa670bdfaf618249f3890abb16509b23 244 Pfam PF03472 Autoinducer binding domain 22 143 1.4E-15 T 20-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMC99_RS02560 fa670bdfaf618249f3890abb16509b23 244 Gene3D G3DSA:3.30.450.80 14 180 1.3E-18 T 20-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMC99_RS02560 fa670bdfaf618249f3890abb16509b23 244 Gene3D G3DSA:1.10.10.10 181 239 5.9E-23 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS02560 fa670bdfaf618249f3890abb16509b23 244 PANTHER PTHR26402 157 239 3.1E-16 T 20-04-2016 AMC99_RS02560 fa670bdfaf618249f3890abb16509b23 244 PANTHER PTHR26402:SF151 157 239 3.1E-16 T 20-04-2016 AMC99_RS02560 fa670bdfaf618249f3890abb16509b23 244 SMART SM00421 176 233 7.3E-22 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS02560 fa670bdfaf618249f3890abb16509b23 244 Pfam PF00196 Bacterial regulatory proteins, luxR family 178 230 1.3E-18 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS02560 fa670bdfaf618249f3890abb16509b23 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 209 221 1.0E-10 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS02560 fa670bdfaf618249f3890abb16509b23 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 209 1.0E-10 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS02560 fa670bdfaf618249f3890abb16509b23 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 193 1.0E-10 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS02560 fa670bdfaf618249f3890abb16509b23 244 SUPERFAMILY SSF46894 171 239 2.35E-19 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_RS02560 fa670bdfaf618249f3890abb16509b23 244 SUPERFAMILY SSF75516 15 170 9.81E-22 T 20-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMC99_RS02560 fa670bdfaf618249f3890abb16509b23 244 ProSitePatterns PS00622 LuxR-type HTH domain signature. 193 220 - T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_RS02825 6741753a499240fc78dbbd03c1c2d904 232 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 3.1E-10 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_RS02825 6741753a499240fc78dbbd03c1c2d904 232 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 3.1E-10 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_RS02825 6741753a499240fc78dbbd03c1c2d904 232 SMART SM00100 15 133 3.7E-12 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain AMC99_RS02825 6741753a499240fc78dbbd03c1c2d904 232 Pfam PF13545 Crp-like helix-turn-helix domain 150 225 7.3E-19 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_RS02825 6741753a499240fc78dbbd03c1c2d904 232 SMART SM00419 170 219 2.3E-14 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_RS02825 6741753a499240fc78dbbd03c1c2d904 232 ProSitePatterns PS00042 Crp-type HTH domain signature. 178 201 - T 20-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AMC99_RS02825 6741753a499240fc78dbbd03c1c2d904 232 Gene3D G3DSA:1.10.10.10 147 226 2.0E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS02825 6741753a499240fc78dbbd03c1c2d904 232 Gene3D G3DSA:2.60.120.10 17 142 8.5E-22 T 20-04-2016 IPR014710 RmlC-like jelly roll fold AMC99_RS02825 6741753a499240fc78dbbd03c1c2d904 232 SUPERFAMILY SSF51206 8 142 1.57E-25 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like AMC99_RS02825 6741753a499240fc78dbbd03c1c2d904 232 PANTHER PTHR24567:SF28 5 232 6.1E-42 T 20-04-2016 AMC99_RS02825 6741753a499240fc78dbbd03c1c2d904 232 Pfam PF00027 Cyclic nucleotide-binding domain 34 117 5.1E-14 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain AMC99_RS02825 6741753a499240fc78dbbd03c1c2d904 232 SUPERFAMILY SSF46785 147 227 2.66E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS02825 6741753a499240fc78dbbd03c1c2d904 232 PANTHER PTHR24567 5 232 6.1E-42 T 20-04-2016 AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 16 32 7.3E-59 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 252 272 7.3E-59 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 305 325 7.3E-59 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 105 126 7.3E-59 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 280 301 7.3E-59 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 78 102 7.3E-59 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 163 183 7.3E-59 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 340 363 7.3E-59 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 135 157 7.3E-59 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 SUPERFAMILY SSF103473 7 400 2.49E-64 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 PANTHER PTHR23504:SF18 2 408 5.8E-133 T 20-04-2016 AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 PANTHER PTHR23504 2 408 5.8E-133 T 20-04-2016 AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 20-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 Pfam PF07690 Major Facilitator Superfamily 11 356 1.7E-50 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 Gene3D G3DSA:1.20.1250.20 211 398 4.1E-17 T 20-04-2016 AMC99_RS11245 91fe00cd8e9d0d710f08989de0c0715f 409 Gene3D G3DSA:1.20.1250.20 6 192 1.4E-42 T 20-04-2016 AMC99_RS07930 addf41cc933bcc7f9b4347ebe248b364 290 PANTHER PTHR22769:SF7 115 290 3.5E-68 T 20-04-2016 AMC99_RS07930 addf41cc933bcc7f9b4347ebe248b364 290 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 40 121 1.4E-7 T 20-04-2016 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 AMC99_RS07930 addf41cc933bcc7f9b4347ebe248b364 290 Gene3D G3DSA:3.90.79.10 121 289 9.0E-45 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS07930 addf41cc933bcc7f9b4347ebe248b364 290 Pfam PF00293 NUDIX domain 160 264 6.0E-13 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMC99_RS07930 addf41cc933bcc7f9b4347ebe248b364 290 PANTHER PTHR22769 115 290 3.5E-68 T 20-04-2016 AMC99_RS07930 addf41cc933bcc7f9b4347ebe248b364 290 SUPERFAMILY SSF55811 108 288 1.76E-41 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS07930 addf41cc933bcc7f9b4347ebe248b364 290 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 123 154 4.9E-11 T 20-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 AMC99_RS07930 addf41cc933bcc7f9b4347ebe248b364 290 ProSitePatterns PS00893 Nudix box signature. 189 210 - T 20-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMC99_RS02945 e2d9b85318886fe4ce183d7f3104d059 312 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 38 307 5.2E-90 T 20-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 AMC99_RS02945 e2d9b85318886fe4ce183d7f3104d059 312 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 90 112 - T 20-04-2016 IPR030470 UbiA prenyltransferase conserved site AMC99_RS02945 e2d9b85318886fe4ce183d7f3104d059 312 Pfam PF01040 UbiA prenyltransferase family 53 292 1.3E-50 T 20-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AMC99_RS02945 e2d9b85318886fe4ce183d7f3104d059 312 PANTHER PTHR11048 38 312 1.3E-76 T 20-04-2016 AMC99_RS02945 e2d9b85318886fe4ce183d7f3104d059 312 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 29 312 23.966 T 20-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 AMC99_RS02945 e2d9b85318886fe4ce183d7f3104d059 312 PANTHER PTHR11048:SF28 38 312 1.3E-76 T 20-04-2016 AMC99_RS00440 efb0303296572c16f134193746c63b9d 206 PANTHER PTHR11562 23 203 7.9E-31 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMC99_RS00440 efb0303296572c16f134193746c63b9d 206 SUPERFAMILY SSF161111 18 203 7.72E-36 T 20-04-2016 AMC99_RS00440 efb0303296572c16f134193746c63b9d 206 Pfam PF01545 Cation efflux family 25 203 1.0E-11 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMC99_RS00440 efb0303296572c16f134193746c63b9d 206 Gene3D G3DSA:1.20.1510.10 22 203 3.2E-25 T 20-04-2016 IPR027469 Cation efflux protein transmembrane domain AMC99_RS00440 efb0303296572c16f134193746c63b9d 206 PANTHER PTHR11562:SF17 23 203 7.9E-31 T 20-04-2016 AMC99_RS13060 3c0b69fbbff0cd94bbae264366c9320d 817 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 8 799 0.0 T 20-04-2016 IPR026362 DEXH box helicase, DNA ligase-associated AMC99_RS13060 3c0b69fbbff0cd94bbae264366c9320d 817 Gene3D G3DSA:3.40.50.300 14 193 2.3E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS13060 3c0b69fbbff0cd94bbae264366c9320d 817 SMART SM00487 16 229 8.1E-28 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_RS13060 3c0b69fbbff0cd94bbae264366c9320d 817 PANTHER PTHR24031 22 194 6.9E-69 T 20-04-2016 AMC99_RS13060 3c0b69fbbff0cd94bbae264366c9320d 817 PANTHER PTHR24031 219 372 6.9E-69 T 20-04-2016 AMC99_RS13060 3c0b69fbbff0cd94bbae264366c9320d 817 PANTHER PTHR24031:SF122 22 194 6.9E-69 T 20-04-2016 AMC99_RS13060 3c0b69fbbff0cd94bbae264366c9320d 817 PANTHER PTHR24031:SF122 219 372 6.9E-69 T 20-04-2016 AMC99_RS13060 3c0b69fbbff0cd94bbae264366c9320d 817 Pfam PF00271 Helicase conserved C-terminal domain 249 351 1.9E-13 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS13060 3c0b69fbbff0cd94bbae264366c9320d 817 SUPERFAMILY SSF52540 33 364 1.47E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS13060 3c0b69fbbff0cd94bbae264366c9320d 817 SMART SM00490 274 356 1.1E-13 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS13060 3c0b69fbbff0cd94bbae264366c9320d 817 Gene3D G3DSA:3.40.50.300 248 366 4.7E-27 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS13060 3c0b69fbbff0cd94bbae264366c9320d 817 PIRSF PIRSF037307 3 807 4.2E-173 T 20-04-2016 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 AMC99_RS13060 3c0b69fbbff0cd94bbae264366c9320d 817 Pfam PF00270 DEAD/DEAH box helicase 22 195 1.7E-22 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_RS13060 3c0b69fbbff0cd94bbae264366c9320d 817 Pfam PF08494 DEAD/H associated 594 774 2.3E-42 T 20-04-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 AMC99_RS08950 fe8da2e303522f7358426ac12c2cb215 70 SUPERFAMILY SSF46955 12 61 1.39E-6 T 20-04-2016 IPR009061 Putative DNA-binding domain AMC99_RS08950 fe8da2e303522f7358426ac12c2cb215 70 Gene3D G3DSA:1.10.10.10 11 63 2.1E-5 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS08950 fe8da2e303522f7358426ac12c2cb215 70 Pfam PF12728 Helix-turn-helix domain 12 61 1.1E-8 T 20-04-2016 AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 SUPERFAMILY SSF52313 8 236 1.7E-88 T 20-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 PANTHER PTHR12534 6 246 5.7E-112 T 20-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 PRINTS PR00395 Ribosomal protein S2 signature 159 176 1.8E-37 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 PRINTS PR00395 Ribosomal protein S2 signature 89 106 1.8E-37 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 PRINTS PR00395 Ribosomal protein S2 signature 39 48 1.8E-37 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 PRINTS PR00395 Ribosomal protein S2 signature 176 187 1.8E-37 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 PRINTS PR00395 Ribosomal protein S2 signature 197 211 1.8E-37 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 PRINTS PR00395 Ribosomal protein S2 signature 8 26 1.8E-37 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 226 40.282 T 20-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 Pfam PF00318 Ribosomal protein S2 11 225 6.4E-90 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 Gene3D G3DSA:3.40.50.10490 159 238 3.7E-61 T 20-04-2016 AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 Gene3D G3DSA:3.40.50.10490 25 101 3.7E-61 T 20-04-2016 AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 159 183 - T 20-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 20-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 Gene3D G3DSA:1.10.287.610 102 153 2.7E-22 T 20-04-2016 AMC99_RS03335 50f86c917e7d207f28d829eba21f4cdd 249 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 5 226 1.1E-97 T 20-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AMC99_RS08850 acfb51f5a1db6d11d4a5106366e2897f 396 Gene3D G3DSA:3.40.50.2000 182 355 1.5E-27 T 20-04-2016 AMC99_RS08850 acfb51f5a1db6d11d4a5106366e2897f 396 PANTHER PTHR12526:SF363 6 393 8.3E-69 T 20-04-2016 AMC99_RS08850 acfb51f5a1db6d11d4a5106366e2897f 396 SUPERFAMILY SSF53756 7 381 4.32E-73 T 20-04-2016 AMC99_RS08850 acfb51f5a1db6d11d4a5106366e2897f 396 Pfam PF13439 Glycosyltransferase Family 4 20 186 2.1E-23 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMC99_RS08850 acfb51f5a1db6d11d4a5106366e2897f 396 Pfam PF00534 Glycosyl transferases group 1 197 356 4.2E-28 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 AMC99_RS08850 acfb51f5a1db6d11d4a5106366e2897f 396 PANTHER PTHR12526 6 393 8.3E-69 T 20-04-2016 AMC99_RS05510 a998267a41bf38b2ffe413a7f8edc7a8 285 PANTHER PTHR22908 7 237 7.1E-69 T 20-04-2016 AMC99_RS05510 a998267a41bf38b2ffe413a7f8edc7a8 285 SMART SM00382 29 187 3.9E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS05510 a998267a41bf38b2ffe413a7f8edc7a8 285 Gene3D G3DSA:3.40.50.300 14 204 4.1E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05510 a998267a41bf38b2ffe413a7f8edc7a8 285 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 33 180 2.1E-14 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_RS05510 a998267a41bf38b2ffe413a7f8edc7a8 285 SUPERFAMILY SSF52540 12 240 3.17E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09470 a36518cd3e6cf784ba10ada856985b03 391 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 226 5.0E-22 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS09470 a36518cd3e6cf784ba10ada856985b03 391 PANTHER PTHR10909 10 387 1.2E-170 T 20-04-2016 AMC99_RS09470 a36518cd3e6cf784ba10ada856985b03 391 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 129 4.3E-26 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS09470 a36518cd3e6cf784ba10ada856985b03 391 SUPERFAMILY SSF56645 6 251 4.32E-74 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS09470 a36518cd3e6cf784ba10ada856985b03 391 PANTHER PTHR10909:SF204 10 387 1.2E-170 T 20-04-2016 AMC99_RS09470 a36518cd3e6cf784ba10ada856985b03 391 Gene3D G3DSA:2.40.110.10 133 225 1.2E-36 T 20-04-2016 AMC99_RS09470 a36518cd3e6cf784ba10ada856985b03 391 SUPERFAMILY SSF47203 237 389 2.42E-43 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS09470 a36518cd3e6cf784ba10ada856985b03 391 Gene3D G3DSA:1.10.540.10 7 131 2.8E-36 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS09470 a36518cd3e6cf784ba10ada856985b03 391 Gene3D G3DSA:1.20.140.10 226 388 7.0E-58 T 20-04-2016 AMC99_RS09470 a36518cd3e6cf784ba10ada856985b03 391 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 386 6.2E-42 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS02790 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 20-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AMC99_RS02790 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 Gene3D G3DSA:3.40.50.1100 204 434 2.5E-84 T 20-04-2016 AMC99_RS02790 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 Gene3D G3DSA:3.40.50.1100 131 203 3.8E-7 T 20-04-2016 AMC99_RS02790 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 PANTHER PTHR10314 53 329 1.1E-146 T 20-04-2016 AMC99_RS02790 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 PANTHER PTHR10314 361 461 1.1E-146 T 20-04-2016 AMC99_RS02790 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 PANTHER PTHR10314 25 36 1.1E-146 T 20-04-2016 AMC99_RS02790 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 Pfam PF14821 Threonine synthase N terminus 3 80 3.5E-26 T 20-04-2016 IPR029144 Threonine synthase, N-terminal AMC99_RS02790 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 SUPERFAMILY SSF53686 1 461 1.08E-154 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_RS02790 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 Gene3D G3DSA:3.90.1380.10 1 85 5.2E-27 T 20-04-2016 IPR029144 Threonine synthase, N-terminal AMC99_RS02790 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 90 409 4.8E-18 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_RS02790 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 PANTHER PTHR10314:SF1 53 329 1.1E-146 T 20-04-2016 AMC99_RS02790 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 PANTHER PTHR10314:SF1 361 461 1.1E-146 T 20-04-2016 AMC99_RS02790 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 PANTHER PTHR10314:SF1 25 36 1.1E-146 T 20-04-2016 AMC99_RS02790 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 TIGRFAM TIGR00260 thrC: threonine synthase 69 426 2.9E-77 T 20-04-2016 IPR004450 Threonine synthase-like AMC99_RS00865 f6510b9392b3bfca7fb86292dafdeae0 324 Gene3D G3DSA:3.90.550.10 11 247 3.8E-20 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS00865 f6510b9392b3bfca7fb86292dafdeae0 324 SUPERFAMILY SSF53448 11 232 5.85E-19 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS00865 f6510b9392b3bfca7fb86292dafdeae0 324 Pfam PF00535 Glycosyl transferase family 2 13 162 4.4E-9 T 20-04-2016 IPR001173 Glycosyltransferase 2-like AMC99_RS10970 e7ff8c2b8eada97f432c46301088c1e1 201 PANTHER PTHR10108:SF831 12 173 6.2E-54 T 20-04-2016 AMC99_RS10970 e7ff8c2b8eada97f432c46301088c1e1 201 Pfam PF07021 Methionine biosynthesis protein MetW 10 199 1.9E-71 T 20-04-2016 IPR010743 Methionine biosynthesis MetW AMC99_RS10970 e7ff8c2b8eada97f432c46301088c1e1 201 PANTHER PTHR10108 12 173 6.2E-54 T 20-04-2016 AMC99_RS10970 e7ff8c2b8eada97f432c46301088c1e1 201 SUPERFAMILY SSF53335 13 178 7.12E-27 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10970 e7ff8c2b8eada97f432c46301088c1e1 201 Gene3D G3DSA:3.40.50.150 20 183 3.2E-24 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10970 e7ff8c2b8eada97f432c46301088c1e1 201 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 10 199 2.6E-72 T 20-04-2016 IPR010743 Methionine biosynthesis MetW AMC99_RS09635 f7c07e336644ab8d8bcec551fe00ea07 244 PANTHER PTHR11228:SF33 14 232 1.7E-27 T 20-04-2016 AMC99_RS09635 f7c07e336644ab8d8bcec551fe00ea07 244 Pfam PF04055 Radical SAM superfamily 33 144 2.1E-9 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_RS09635 f7c07e336644ab8d8bcec551fe00ea07 244 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 13 241 35.339 T 20-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 AMC99_RS09635 f7c07e336644ab8d8bcec551fe00ea07 244 PANTHER PTHR11228 14 232 1.7E-27 T 20-04-2016 AMC99_RS09635 f7c07e336644ab8d8bcec551fe00ea07 244 Gene3D G3DSA:3.20.20.70 36 142 1.0E-13 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS09635 f7c07e336644ab8d8bcec551fe00ea07 244 PIRSF PIRSF000370 13 244 7.5E-42 T 20-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 AMC99_RS09635 f7c07e336644ab8d8bcec551fe00ea07 244 SUPERFAMILY SSF102114 34 128 3.4E-12 T 20-04-2016 AMC99_RS09635 f7c07e336644ab8d8bcec551fe00ea07 244 Pfam PF13394 4Fe-4S single cluster domain 32 131 1.3E-12 T 20-04-2016 AMC99_RS07060 b317d5bac77ff99c11391a4cfe650018 575 Gene3D G3DSA:1.20.1250.20 353 550 2.0E-6 T 20-04-2016 AMC99_RS07060 b317d5bac77ff99c11391a4cfe650018 575 Gene3D G3DSA:1.20.1250.20 11 216 7.7E-15 T 20-04-2016 AMC99_RS07060 b317d5bac77ff99c11391a4cfe650018 575 Pfam PF07690 Major Facilitator Superfamily 31 310 1.7E-11 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS07060 b317d5bac77ff99c11391a4cfe650018 575 SUPERFAMILY SSF103473 331 435 2.7E-17 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS07060 b317d5bac77ff99c11391a4cfe650018 575 SUPERFAMILY SSF103473 23 226 2.7E-17 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS07060 b317d5bac77ff99c11391a4cfe650018 575 SUPERFAMILY SSF103473 466 555 2.7E-17 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS07060 b317d5bac77ff99c11391a4cfe650018 575 PANTHER PTHR12778 30 216 8.3E-47 T 20-04-2016 AMC99_RS07060 b317d5bac77ff99c11391a4cfe650018 575 PANTHER PTHR12778 316 441 8.3E-47 T 20-04-2016 AMC99_RS07060 b317d5bac77ff99c11391a4cfe650018 575 PANTHER PTHR12778 458 558 8.3E-47 T 20-04-2016 AMC99_RS01705 ed9ac44443970a89466597635eee6fed 340 PANTHER PTHR30146 6 340 5.3E-78 T 20-04-2016 AMC99_RS01705 ed9ac44443970a89466597635eee6fed 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 54 1.2E-16 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMC99_RS01705 ed9ac44443970a89466597635eee6fed 340 SUPERFAMILY SSF47413 7 65 9.24E-17 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS01705 ed9ac44443970a89466597635eee6fed 340 Gene3D G3DSA:3.40.50.2300 182 317 2.4E-37 T 20-04-2016 AMC99_RS01705 ed9ac44443970a89466597635eee6fed 340 Pfam PF13377 Periplasmic binding protein-like domain 179 337 7.7E-25 T 20-04-2016 AMC99_RS01705 ed9ac44443970a89466597635eee6fed 340 Gene3D G3DSA:3.40.50.2300 60 181 4.1E-17 T 20-04-2016 AMC99_RS01705 ed9ac44443970a89466597635eee6fed 340 SMART SM00354 7 78 5.9E-17 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMC99_RS01705 ed9ac44443970a89466597635eee6fed 340 SUPERFAMILY SSF53822 82 321 3.14E-42 T 20-04-2016 IPR028082 Periplasmic binding protein-like I AMC99_RS01705 ed9ac44443970a89466597635eee6fed 340 Gene3D G3DSA:1.10.260.40 10 59 2.9E-21 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS03220 27006ab197130c2957b0567ba613a744 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.2E-25 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS03220 27006ab197130c2957b0567ba613a744 225 SUPERFAMILY SSF52172 1 118 1.35E-37 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS03220 27006ab197130c2957b0567ba613a744 225 SMART SM00448 1 112 3.2E-38 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS03220 27006ab197130c2957b0567ba613a744 225 PANTHER PTHR26402:SF316 1 224 7.4E-99 T 20-04-2016 AMC99_RS03220 27006ab197130c2957b0567ba613a744 225 PANTHER PTHR26402 1 224 7.4E-99 T 20-04-2016 AMC99_RS03220 27006ab197130c2957b0567ba613a744 225 SUPERFAMILY SSF46894 119 217 3.12E-28 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_RS03220 27006ab197130c2957b0567ba613a744 225 Gene3D G3DSA:3.40.50.2300 1 122 7.6E-36 T 20-04-2016 AMC99_RS03220 27006ab197130c2957b0567ba613a744 225 Pfam PF00072 Response regulator receiver domain 3 112 7.7E-25 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS03220 27006ab197130c2957b0567ba613a744 225 Gene3D G3DSA:1.10.10.10 123 218 1.7E-31 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS03220 27006ab197130c2957b0567ba613a744 225 SMART SM00862 145 216 1.2E-26 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS12690 282f0d9a9ed0526bd9b8f64ba7bcfa53 345 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 318 5.0E-100 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12690 282f0d9a9ed0526bd9b8f64ba7bcfa53 345 Gene3D G3DSA:3.90.25.10 188 330 1.3E-54 T 20-04-2016 AMC99_RS12690 282f0d9a9ed0526bd9b8f64ba7bcfa53 345 PANTHER PTHR10366 2 332 3.0E-166 T 20-04-2016 AMC99_RS12690 282f0d9a9ed0526bd9b8f64ba7bcfa53 345 SUPERFAMILY SSF51735 1 333 2.07E-100 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12690 282f0d9a9ed0526bd9b8f64ba7bcfa53 345 Gene3D G3DSA:3.40.50.720 1 187 1.9E-71 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12690 282f0d9a9ed0526bd9b8f64ba7bcfa53 345 PANTHER PTHR10366:SF41 2 332 3.0E-166 T 20-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 AMC99_RS12690 282f0d9a9ed0526bd9b8f64ba7bcfa53 345 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 332 1.8E-151 T 20-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 AMC99_RS10480 2ebe462a0873f915b84f43426f859124 180 Gene3D G3DSA:3.40.630.30 2 172 4.5E-41 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS10480 2ebe462a0873f915b84f43426f859124 180 PANTHER PTHR13256 1 171 3.9E-29 T 20-04-2016 AMC99_RS10480 2ebe462a0873f915b84f43426f859124 180 SUPERFAMILY SSF55729 4 169 1.15E-32 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS10480 2ebe462a0873f915b84f43426f859124 180 Pfam PF13302 Acetyltransferase (GNAT) domain 11 145 4.8E-23 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS02295 445e3347e3de4d8f7d0258d09105042d 443 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 185 200 - T 20-04-2016 IPR019826 Carboxylesterase type B, active site AMC99_RS02295 445e3347e3de4d8f7d0258d09105042d 443 Pfam PF00135 Carboxylesterase family 7 316 3.1E-74 T 20-04-2016 IPR002018 Carboxylesterase, type B AMC99_RS02295 445e3347e3de4d8f7d0258d09105042d 443 Pfam PF00135 Carboxylesterase family 319 416 8.3E-7 T 20-04-2016 IPR002018 Carboxylesterase, type B AMC99_RS02295 445e3347e3de4d8f7d0258d09105042d 443 SUPERFAMILY SSF53474 7 422 9.97E-95 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS02295 445e3347e3de4d8f7d0258d09105042d 443 Gene3D G3DSA:3.40.50.1820 5 422 8.9E-102 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS02295 445e3347e3de4d8f7d0258d09105042d 443 PANTHER PTHR11559:SF142 1 396 1.2E-97 T 20-04-2016 AMC99_RS02295 445e3347e3de4d8f7d0258d09105042d 443 PANTHER PTHR11559 1 396 1.2E-97 T 20-04-2016 AMC99_RS09245 e1c164845450e2147c0654218659c021 469 Gene3D G3DSA:3.10.20.70 4 106 1.7E-35 T 20-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMC99_RS09245 e1c164845450e2147c0654218659c021 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 6 468 2.6E-194 T 20-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMC99_RS09245 e1c164845450e2147c0654218659c021 469 Pfam PF00120 Glutamine synthetase, catalytic domain 104 466 6.3E-135 T 20-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMC99_RS09245 e1c164845450e2147c0654218659c021 469 Gene3D G3DSA:3.30.590.10 107 456 2.3E-133 T 20-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 AMC99_RS09245 e1c164845450e2147c0654218659c021 469 SUPERFAMILY SSF54368 4 102 6.02E-34 T 20-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMC99_RS09245 e1c164845450e2147c0654218659c021 469 PANTHER PTHR20852 4 139 3.8E-245 T 20-04-2016 AMC99_RS09245 e1c164845450e2147c0654218659c021 469 PANTHER PTHR20852 161 469 3.8E-245 T 20-04-2016 AMC99_RS09245 e1c164845450e2147c0654218659c021 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 20-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMC99_RS09245 e1c164845450e2147c0654218659c021 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 51 69 - T 20-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMC99_RS09245 e1c164845450e2147c0654218659c021 469 SMART SM01230 103 379 9.8E-142 T 20-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMC99_RS09245 e1c164845450e2147c0654218659c021 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 20-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMC99_RS09245 e1c164845450e2147c0654218659c021 469 SUPERFAMILY SSF55931 104 468 5.98E-136 T 20-04-2016 AMC99_RS09245 e1c164845450e2147c0654218659c021 469 PANTHER PTHR20852:SF15 4 139 3.8E-245 T 20-04-2016 AMC99_RS09245 e1c164845450e2147c0654218659c021 469 PANTHER PTHR20852:SF15 161 469 3.8E-245 T 20-04-2016 AMC99_RS09245 e1c164845450e2147c0654218659c021 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 96 2.5E-28 T 20-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMC99_RS13450 966d7e61746225f4c0240348339fd4a6 289 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3 181 1.8E-59 T 20-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AMC99_RS13450 966d7e61746225f4c0240348339fd4a6 289 PANTHER PTHR23309 1 287 6.6E-127 T 20-04-2016 AMC99_RS13450 966d7e61746225f4c0240348339fd4a6 289 Gene3D G3DSA:1.10.1040.10 186 281 8.3E-35 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMC99_RS13450 966d7e61746225f4c0240348339fd4a6 289 SUPERFAMILY SSF51735 1 183 2.19E-56 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS13450 966d7e61746225f4c0240348339fd4a6 289 Gene3D G3DSA:3.40.50.720 2 185 4.2E-59 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS13450 966d7e61746225f4c0240348339fd4a6 289 SUPERFAMILY SSF48179 183 284 1.11E-33 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMC99_RS13450 966d7e61746225f4c0240348339fd4a6 289 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 184 280 4.8E-33 T 20-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AMC99_RS13450 966d7e61746225f4c0240348339fd4a6 289 PIRSF PIRSF000105 1 289 3.5E-81 T 20-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 AMC99_RS08025 3458acc8b53fb86ffddb9739c5a1658a 312 PANTHER PTHR10996 37 312 8.1E-57 T 20-04-2016 AMC99_RS08025 3458acc8b53fb86ffddb9739c5a1658a 312 SUPERFAMILY SSF51735 95 275 2.72E-43 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08025 3458acc8b53fb86ffddb9739c5a1658a 312 PANTHER PTHR10996:SF122 37 312 8.1E-57 T 20-04-2016 AMC99_RS08025 3458acc8b53fb86ffddb9739c5a1658a 312 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 213 229 - T 20-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMC99_RS08025 3458acc8b53fb86ffddb9739c5a1658a 312 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 55 301 2.7E-7 T 20-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AMC99_RS08025 3458acc8b53fb86ffddb9739c5a1658a 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 273 1.5E-40 T 20-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMC99_RS08025 3458acc8b53fb86ffddb9739c5a1658a 312 Gene3D G3DSA:3.40.50.720 113 275 9.9E-47 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08025 3458acc8b53fb86ffddb9739c5a1658a 312 SUPERFAMILY SSF52283 12 126 1.68E-9 T 20-04-2016 AMC99_RS08025 3458acc8b53fb86ffddb9739c5a1658a 312 Gene3D G3DSA:3.40.50.720 50 112 1.7E-17 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02375 96d5e54081451b87e998779461fd009b 340 PANTHER PTHR30146 7 316 4.9E-109 T 20-04-2016 AMC99_RS02375 96d5e54081451b87e998779461fd009b 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 9 19 3.1E-6 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMC99_RS02375 96d5e54081451b87e998779461fd009b 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 19 29 3.1E-6 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMC99_RS02375 96d5e54081451b87e998779461fd009b 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 1.6E-19 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMC99_RS02375 96d5e54081451b87e998779461fd009b 340 Gene3D G3DSA:3.40.50.2300 60 181 1.4E-20 T 20-04-2016 AMC99_RS02375 96d5e54081451b87e998779461fd009b 340 PANTHER PTHR30146:SF52 7 316 4.9E-109 T 20-04-2016 AMC99_RS02375 96d5e54081451b87e998779461fd009b 340 SUPERFAMILY SSF47413 7 64 1.93E-17 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS02375 96d5e54081451b87e998779461fd009b 340 SUPERFAMILY SSF53822 68 337 4.12E-62 T 20-04-2016 IPR028082 Periplasmic binding protein-like I AMC99_RS02375 96d5e54081451b87e998779461fd009b 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMC99_RS02375 96d5e54081451b87e998779461fd009b 340 Gene3D G3DSA:1.10.260.40 8 59 7.2E-25 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS02375 96d5e54081451b87e998779461fd009b 340 Gene3D G3DSA:3.40.50.2300 182 311 2.2E-48 T 20-04-2016 AMC99_RS02375 96d5e54081451b87e998779461fd009b 340 Pfam PF13377 Periplasmic binding protein-like domain 176 334 6.4E-36 T 20-04-2016 AMC99_RS02375 96d5e54081451b87e998779461fd009b 340 SMART SM00354 7 77 1.6E-26 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 143 4.2E-41 T 20-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 4.4E-26 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 4.4E-26 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 4.4E-26 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 4.4E-26 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 4.4E-26 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 310 6.4E-129 T 20-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 Gene3D G3DSA:3.40.50.720 2 144 6.1E-50 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 SUPERFAMILY SSF51735 5 144 2.46E-47 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 PIRSF PIRSF000102 1 316 8.8E-105 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 SUPERFAMILY SSF56327 146 315 4.47E-55 T 20-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 307 1.4E-28 T 20-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 PANTHER PTHR11540 1 310 1.9E-146 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 Gene3D G3DSA:3.90.110.10 145 313 4.9E-60 T 20-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 PANTHER PTHR11540:SF16 1 310 1.9E-146 T 20-04-2016 AMC99_RS07345 682e02feabe00385b3add8bf7faa57fc 320 Hamap MF_00487 Malate dehydrogenase [mdh]. 4 313 41.409 T 20-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AMC99_RS09055 12f6dc31fcd7a614bfa58a9ed26abe4a 246 PANTHER PTHR23291 31 246 5.1E-67 T 20-04-2016 IPR006214 Bax inhibitor 1-related AMC99_RS09055 12f6dc31fcd7a614bfa58a9ed26abe4a 246 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 34 242 4.1E-61 T 20-04-2016 AMC99_RS09055 12f6dc31fcd7a614bfa58a9ed26abe4a 246 PANTHER PTHR23291:SF42 31 246 5.1E-67 T 20-04-2016 AMC99_RS05140 3c314116dc1c7cf5f0980ee37db32f50 315 Pfam PF00005 ABC transporter 22 164 1.0E-31 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS05140 3c314116dc1c7cf5f0980ee37db32f50 315 PANTHER PTHR24220:SF305 7 244 1.4E-105 T 20-04-2016 AMC99_RS05140 3c314116dc1c7cf5f0980ee37db32f50 315 SMART SM00382 31 212 3.7E-16 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS05140 3c314116dc1c7cf5f0980ee37db32f50 315 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_RS05140 3c314116dc1c7cf5f0980ee37db32f50 315 Gene3D G3DSA:3.40.50.300 2 228 9.7E-66 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05140 3c314116dc1c7cf5f0980ee37db32f50 315 PANTHER PTHR24220 7 244 1.4E-105 T 20-04-2016 AMC99_RS05140 3c314116dc1c7cf5f0980ee37db32f50 315 SUPERFAMILY SSF52540 3 228 1.46E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04845 06b72fdccf7cbf559bfbce28d96d705c 799 SUPERFAMILY SSF82689 689 784 1.83E-28 T 20-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMC99_RS04845 06b72fdccf7cbf559bfbce28d96d705c 799 Pfam PF00924 Mechanosensitive ion channel 576 775 1.4E-52 T 20-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMC99_RS04845 06b72fdccf7cbf559bfbce28d96d705c 799 SUPERFAMILY SSF50182 619 684 2.58E-17 T 20-04-2016 IPR010920 LSM domain AMC99_RS04845 06b72fdccf7cbf559bfbce28d96d705c 799 PANTHER PTHR30347 205 797 7.4E-84 T 20-04-2016 AMC99_RS04845 06b72fdccf7cbf559bfbce28d96d705c 799 Gene3D G3DSA:3.30.70.100 690 773 3.5E-24 T 20-04-2016 AMC99_RS04845 06b72fdccf7cbf559bfbce28d96d705c 799 Gene3D G3DSA:2.30.30.60 634 682 1.9E-17 T 20-04-2016 AMC99_RS04845 06b72fdccf7cbf559bfbce28d96d705c 799 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 648 682 - T 20-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AMC99_RS04845 06b72fdccf7cbf559bfbce28d96d705c 799 PANTHER PTHR30347:SF3 205 797 7.4E-84 T 20-04-2016 AMC99_RS04845 06b72fdccf7cbf559bfbce28d96d705c 799 SUPERFAMILY SSF82861 534 617 2.88E-11 T 20-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMC99_RS07205 79851bbeca8cf811e5813e6d77f02362 198 Pfam PF13649 Methyltransferase domain 42 130 1.2E-12 T 20-04-2016 AMC99_RS07205 79851bbeca8cf811e5813e6d77f02362 198 SUPERFAMILY SSF53335 9 182 2.41E-29 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS07205 79851bbeca8cf811e5813e6d77f02362 198 Gene3D G3DSA:3.40.50.150 8 181 1.0E-24 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS07205 79851bbeca8cf811e5813e6d77f02362 198 PANTHER PTHR10108 9 131 2.9E-15 T 20-04-2016 AMC99_RS09570 d4044d1d94f42710d864b35c26a15a23 188 PANTHER PTHR10516 42 161 1.6E-22 T 20-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type AMC99_RS09570 d4044d1d94f42710d864b35c26a15a23 188 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 56 151 1.1E-18 T 20-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AMC99_RS09570 d4044d1d94f42710d864b35c26a15a23 188 SUPERFAMILY SSF54534 9 158 2.16E-30 T 20-04-2016 AMC99_RS09570 d4044d1d94f42710d864b35c26a15a23 188 Gene3D G3DSA:3.10.50.40 39 159 1.5E-29 T 20-04-2016 AMC99_RS06615 3dfe836d61f9a4b08d58167afbeb15a1 309 Gene3D G3DSA:3.60.15.10 43 264 2.0E-34 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS06615 3dfe836d61f9a4b08d58167afbeb15a1 309 SMART SM00849 70 261 8.4E-17 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS06615 3dfe836d61f9a4b08d58167afbeb15a1 309 Pfam PF00753 Metallo-beta-lactamase superfamily 68 206 5.3E-20 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS06615 3dfe836d61f9a4b08d58167afbeb15a1 309 PANTHER PTHR11935 73 203 1.2E-13 T 20-04-2016 AMC99_RS06615 3dfe836d61f9a4b08d58167afbeb15a1 309 SUPERFAMILY SSF56281 53 263 7.73E-35 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 Gene3D G3DSA:3.30.390.10 4 126 5.2E-56 T 20-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 ProSitePatterns PS00164 Enolase signature. 334 347 - T 20-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 SUPERFAMILY SSF51604 139 423 1.16E-127 T 20-04-2016 IPR029065 Enolase C-terminal domain-like AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 422 1.6E-133 T 20-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 Pfam PF03952 Enolase, N-terminal domain 4 134 2.5E-59 T 20-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 PRINTS PR00148 Enolase signature 363 380 7.5E-49 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 PRINTS PR00148 Enolase signature 107 123 7.5E-49 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 PRINTS PR00148 Enolase signature 161 174 7.5E-49 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 PRINTS PR00148 Enolase signature 311 322 7.5E-49 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 PRINTS PR00148 Enolase signature 334 348 7.5E-49 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 PRINTS PR00148 Enolase signature 37 51 7.5E-49 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 Gene3D G3DSA:3.20.20.120 128 423 3.0E-133 T 20-04-2016 IPR029065 Enolase C-terminal domain-like AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 SUPERFAMILY SSF54826 3 138 3.01E-57 T 20-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 PIRSF PIRSF001400 1 425 8.1E-189 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 PANTHER PTHR11902 1 419 4.4E-264 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 Hamap MF_00318 Enolase [eno]. 2 411 44.917 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 424 1.1E-208 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 SMART SM01193 4 134 2.8E-96 T 20-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMC99_RS05280 b7a28eafcd4511f39ebd673fb1e0c06a 428 SMART SM01192 139 425 2.0E-225 T 20-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMC99_RS04735 3b888889af3ef6d3ce74af6ae8953908 354 SUPERFAMILY SSF52922 222 353 3.01E-39 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMC99_RS04735 3b888889af3ef6d3ce74af6ae8953908 354 SMART SM00861 21 196 2.3E-64 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_RS04735 3b888889af3ef6d3ce74af6ae8953908 354 Pfam PF02779 Transketolase, pyrimidine binding domain 21 195 5.0E-43 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_RS04735 3b888889af3ef6d3ce74af6ae8953908 354 Gene3D G3DSA:3.40.50.920 232 349 1.1E-39 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMC99_RS04735 3b888889af3ef6d3ce74af6ae8953908 354 PANTHER PTHR11624:SF55 19 352 7.2E-202 T 20-04-2016 AMC99_RS04735 3b888889af3ef6d3ce74af6ae8953908 354 Pfam PF02780 Transketolase, C-terminal domain 227 344 6.0E-33 T 20-04-2016 IPR033248 Transketolase, C-terminal domain AMC99_RS04735 3b888889af3ef6d3ce74af6ae8953908 354 Gene3D G3DSA:3.40.50.970 19 229 1.6E-79 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS04735 3b888889af3ef6d3ce74af6ae8953908 354 PANTHER PTHR11624 19 352 7.2E-202 T 20-04-2016 IPR033247 Transketolase family AMC99_RS04735 3b888889af3ef6d3ce74af6ae8953908 354 SUPERFAMILY SSF52518 19 236 1.34E-65 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS09240 935c9672ce3d622b46127bec3ada1bb3 112 Gene3D G3DSA:3.30.70.120 2 112 4.3E-49 T 20-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMC99_RS09240 935c9672ce3d622b46127bec3ada1bb3 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 20-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AMC99_RS09240 935c9672ce3d622b46127bec3ada1bb3 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 20-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AMC99_RS09240 935c9672ce3d622b46127bec3ada1bb3 112 PANTHER PTHR30115 2 112 8.9E-63 T 20-04-2016 AMC99_RS09240 935c9672ce3d622b46127bec3ada1bb3 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 5.8E-43 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_RS09240 935c9672ce3d622b46127bec3ada1bb3 112 PIRSF PIRSF039144 1 112 2.9E-54 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_RS09240 935c9672ce3d622b46127bec3ada1bb3 112 SMART SM00938 4 105 1.7E-67 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_RS09240 935c9672ce3d622b46127bec3ada1bb3 112 SUPERFAMILY SSF54913 2 112 6.67E-45 T 20-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMC99_RS09240 935c9672ce3d622b46127bec3ada1bb3 112 PRINTS PR00340 P-II protein signature 2 17 4.1E-44 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_RS09240 935c9672ce3d622b46127bec3ada1bb3 112 PRINTS PR00340 P-II protein signature 52 75 4.1E-44 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_RS09240 935c9672ce3d622b46127bec3ada1bb3 112 PRINTS PR00340 P-II protein signature 23 41 4.1E-44 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_RS09240 935c9672ce3d622b46127bec3ada1bb3 112 PRINTS PR00340 P-II protein signature 83 103 4.1E-44 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_RS10110 c5d33637c485326372603c40f0e8f39f 626 SMART SM00283 366 620 2.0E-28 T 20-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMC99_RS10110 c5d33637c485326372603c40f0e8f39f 626 PANTHER PTHR32089:SF40 344 623 1.1E-88 T 20-04-2016 AMC99_RS10110 c5d33637c485326372603c40f0e8f39f 626 PANTHER PTHR32089:SF40 237 297 1.1E-88 T 20-04-2016 AMC99_RS10110 c5d33637c485326372603c40f0e8f39f 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 423 619 4.8E-32 T 20-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMC99_RS10110 c5d33637c485326372603c40f0e8f39f 626 PANTHER PTHR32089 344 623 1.1E-88 T 20-04-2016 AMC99_RS10110 c5d33637c485326372603c40f0e8f39f 626 PANTHER PTHR32089 237 297 1.1E-88 T 20-04-2016 AMC99_RS10110 c5d33637c485326372603c40f0e8f39f 626 Gene3D G3DSA:1.10.287.950 381 588 3.4E-41 T 20-04-2016 AMC99_RS10110 c5d33637c485326372603c40f0e8f39f 626 SUPERFAMILY SSF58104 372 619 1.57E-50 T 20-04-2016 AMC99_RS10110 c5d33637c485326372603c40f0e8f39f 626 SUPERFAMILY SSF58104 292 317 1.57E-50 T 20-04-2016 AMC99_RS00265 afdace46b83e309cf69c7ecc831ae124 545 SUPERFAMILY SSF55874 23 131 3.51E-13 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS00265 afdace46b83e309cf69c7ecc831ae124 545 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 147 3.4E-25 T 20-04-2016 AMC99_RS00265 afdace46b83e309cf69c7ecc831ae124 545 Gene3D G3DSA:3.30.565.10 21 173 1.0E-19 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS00075 928e2b38c3ab70f52503c8fb7324e7ac 564 Pfam PF03895 YadA-like C-terminal region 487 564 8.0E-11 T 20-04-2016 IPR005594 YadA-like, C-terminal AMC99_RS00075 928e2b38c3ab70f52503c8fb7324e7ac 564 SUPERFAMILY SSF54523 468 564 1.07E-10 T 20-04-2016 AMC99_RS00075 928e2b38c3ab70f52503c8fb7324e7ac 564 Gene3D G3DSA:3.30.1300.30 178 185 1.0E-8 T 20-04-2016 AMC99_RS00075 928e2b38c3ab70f52503c8fb7324e7ac 564 Gene3D G3DSA:3.30.1300.30 473 564 1.0E-8 T 20-04-2016 AMC99_RS00045 33f9530430e01fd118e5750734ff9177 252 Gene3D G3DSA:3.40.50.150 34 231 4.1E-42 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS00045 33f9530430e01fd118e5750734ff9177 252 PANTHER PTHR10108:SF902 12 249 3.9E-65 T 20-04-2016 AMC99_RS00045 33f9530430e01fd118e5750734ff9177 252 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 20 252 34.489 T 20-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 AMC99_RS00045 33f9530430e01fd118e5750734ff9177 252 PANTHER PTHR10108 12 249 3.9E-65 T 20-04-2016 AMC99_RS00045 33f9530430e01fd118e5750734ff9177 252 SUPERFAMILY SSF53335 18 221 4.56E-41 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS00045 33f9530430e01fd118e5750734ff9177 252 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 22 246 2.6E-66 T 20-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 AMC99_RS00045 33f9530430e01fd118e5750734ff9177 252 Pfam PF13489 Methyltransferase domain 61 220 1.3E-22 T 20-04-2016 AMC99_RS07805 785d39aacc6bed07855715be41f82229 328 PANTHER PTHR30468 22 320 8.4E-63 T 20-04-2016 AMC99_RS07805 785d39aacc6bed07855715be41f82229 328 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 21 318 3.4E-109 T 20-04-2016 IPR017804 Methyltransferase EgtD-like AMC99_RS07805 785d39aacc6bed07855715be41f82229 328 Gene3D G3DSA:3.40.50.150 53 144 1.3E-4 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS07805 785d39aacc6bed07855715be41f82229 328 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 194 316 3.5E-34 T 20-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent AMC99_RS07805 785d39aacc6bed07855715be41f82229 328 PANTHER PTHR30468:SF6 22 320 8.4E-63 T 20-04-2016 AMC99_RS07805 785d39aacc6bed07855715be41f82229 328 PIRSF PIRSF018005 3 322 9.3E-105 T 20-04-2016 IPR017804 Methyltransferase EgtD-like AMC99_RS07805 785d39aacc6bed07855715be41f82229 328 SUPERFAMILY SSF53335 41 210 4.06E-6 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS05035 d29a55f2ed9b64a2eea1b63bfae96d68 559 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 8 557 52.656 T 20-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMC99_RS05035 d29a55f2ed9b64a2eea1b63bfae96d68 559 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 40 56 - T 20-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMC99_RS05035 d29a55f2ed9b64a2eea1b63bfae96d68 559 PANTHER PTHR10277 1 556 4.7E-294 T 20-04-2016 AMC99_RS05035 d29a55f2ed9b64a2eea1b63bfae96d68 559 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 7 556 1.8E-247 T 20-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMC99_RS05035 d29a55f2ed9b64a2eea1b63bfae96d68 559 SUPERFAMILY SSF110921 445 555 8.76E-34 T 20-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMC99_RS05035 d29a55f2ed9b64a2eea1b63bfae96d68 559 SUPERFAMILY SSF51569 22 330 1.12E-94 T 20-04-2016 AMC99_RS05035 d29a55f2ed9b64a2eea1b63bfae96d68 559 Gene3D G3DSA:3.20.20.70 10 396 1.4E-142 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS05035 d29a55f2ed9b64a2eea1b63bfae96d68 559 Pfam PF08502 LeuA allosteric (dimerisation) domain 424 555 5.9E-26 T 20-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMC99_RS05035 d29a55f2ed9b64a2eea1b63bfae96d68 559 PANTHER PTHR10277:SF28 1 556 4.7E-294 T 20-04-2016 AMC99_RS05035 d29a55f2ed9b64a2eea1b63bfae96d68 559 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 243 256 - T 20-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMC99_RS05035 d29a55f2ed9b64a2eea1b63bfae96d68 559 Pfam PF00682 HMGL-like 34 313 6.0E-74 T 20-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMC99_RS05035 d29a55f2ed9b64a2eea1b63bfae96d68 559 SUPERFAMILY SSF89000 391 439 5.1E-15 T 20-04-2016 AMC99_RS05035 d29a55f2ed9b64a2eea1b63bfae96d68 559 SMART SM00917 424 556 1.0E-33 T 20-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMC99_RS03160 dfe67b12ab0a8a42b48bdde8640d17f9 298 PIRSF PIRSF015582 1 298 1.1E-73 T 20-04-2016 IPR011206 Citrate lyase beta subunit-like AMC99_RS03160 dfe67b12ab0a8a42b48bdde8640d17f9 298 PANTHER PTHR32308:SF0 14 296 2.2E-75 T 20-04-2016 AMC99_RS03160 dfe67b12ab0a8a42b48bdde8640d17f9 298 PANTHER PTHR32308 14 296 2.2E-75 T 20-04-2016 IPR011206 Citrate lyase beta subunit-like AMC99_RS03160 dfe67b12ab0a8a42b48bdde8640d17f9 298 Gene3D G3DSA:3.20.20.60 13 249 2.1E-63 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS03160 dfe67b12ab0a8a42b48bdde8640d17f9 298 SUPERFAMILY SSF51621 11 250 2.83E-55 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS03160 dfe67b12ab0a8a42b48bdde8640d17f9 298 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 238 7.5E-32 T 20-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AMC99_RS08565 c027302f0fa9732ce8fbdda923769c50 312 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 4 302 2.8E-56 T 20-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 AMC99_RS08565 c027302f0fa9732ce8fbdda923769c50 312 PANTHER PTHR10846 20 304 3.3E-40 T 20-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 AMC99_RS08565 c027302f0fa9732ce8fbdda923769c50 312 Pfam PF01699 Sodium/calcium exchanger protein 170 309 3.9E-22 T 20-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 AMC99_RS08565 c027302f0fa9732ce8fbdda923769c50 312 Pfam PF01699 Sodium/calcium exchanger protein 7 141 4.2E-17 T 20-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 AMC99_RS06590 89916b71792196c814fb72ae7360e57f 436 SUPERFAMILY SSF55031 222 339 1.57E-9 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS06590 89916b71792196c814fb72ae7360e57f 436 SUPERFAMILY SSF53187 353 429 9.14E-39 T 20-04-2016 AMC99_RS06590 89916b71792196c814fb72ae7360e57f 436 SUPERFAMILY SSF53187 28 226 9.14E-39 T 20-04-2016 AMC99_RS06590 89916b71792196c814fb72ae7360e57f 436 Gene3D G3DSA:3.40.630.10 26 217 4.8E-40 T 20-04-2016 AMC99_RS06590 89916b71792196c814fb72ae7360e57f 436 Gene3D G3DSA:3.40.630.10 342 430 4.8E-40 T 20-04-2016 AMC99_RS06590 89916b71792196c814fb72ae7360e57f 436 Pfam PF07687 Peptidase dimerisation domain 215 331 3.4E-13 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS06590 89916b71792196c814fb72ae7360e57f 436 PANTHER PTHR11014 29 435 5.4E-37 T 20-04-2016 AMC99_RS06590 89916b71792196c814fb72ae7360e57f 436 Pfam PF01546 Peptidase family M20/M25/M40 107 420 3.4E-21 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMC99_RS06590 89916b71792196c814fb72ae7360e57f 436 Gene3D G3DSA:3.30.70.360 218 328 3.6E-14 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 20-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 Gene3D G3DSA:1.10.10.60 406 454 6.4E-8 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 SUPERFAMILY SSF52172 3 189 7.26E-40 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 20-04-2016 IPR025944 Sigma-54 interaction domain, conserved site AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 PANTHER PTHR32071 1 465 9.7E-194 T 20-04-2016 AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 SUPERFAMILY SSF52540 144 376 7.11E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 Pfam PF00072 Response regulator receiver domain 5 115 5.7E-28 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 SMART SM00448 3 116 3.9E-31 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 Pfam PF02954 Bacterial regulatory protein, Fis family 412 450 7.2E-9 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 Gene3D G3DSA:1.10.8.60 313 389 1.2E-26 T 20-04-2016 AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 PANTHER PTHR32071:SF17 1 465 9.7E-194 T 20-04-2016 AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 Gene3D G3DSA:3.40.50.300 142 311 4.9E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 SUPERFAMILY SSF46689 353 454 3.0E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 Pfam PF00158 Sigma-54 interaction domain 145 306 2.2E-48 T 20-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 SMART SM00382 164 303 1.6E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS05775 ed8703d0f1418c53d8fc6c2902643dca 466 Gene3D G3DSA:3.40.50.2300 3 129 4.9E-36 T 20-04-2016 AMC99_RS09280 fbdf20152914d94b4c414c4f9e9c9628 182 SUPERFAMILY SSF82153 21 175 1.44E-17 T 20-04-2016 IPR000782 FAS1 domain AMC99_RS09280 fbdf20152914d94b4c414c4f9e9c9628 182 Gene3D G3DSA:2.30.180.10 33 175 7.8E-17 T 20-04-2016 IPR000782 FAS1 domain AMC99_RS09280 fbdf20152914d94b4c414c4f9e9c9628 182 SMART SM00554 68 178 6.9E-8 T 20-04-2016 IPR000782 FAS1 domain AMC99_RS09280 fbdf20152914d94b4c414c4f9e9c9628 182 Pfam PF02469 Fasciclin domain 44 175 1.7E-12 T 20-04-2016 IPR000782 FAS1 domain AMC99_RS01600 a04d902cb078de15305ab73b03113468 285 SUPERFAMILY SSF52096 15 284 2.42E-68 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS01600 a04d902cb078de15305ab73b03113468 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 128 148 - T 20-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AMC99_RS01600 a04d902cb078de15305ab73b03113468 285 PANTHER PTHR11941 11 282 4.2E-110 T 20-04-2016 AMC99_RS01600 a04d902cb078de15305ab73b03113468 285 Gene3D G3DSA:3.90.226.10 20 282 9.3E-64 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS01600 a04d902cb078de15305ab73b03113468 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 32 284 4.3E-40 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMC99_RS01600 a04d902cb078de15305ab73b03113468 285 PANTHER PTHR11941:SF65 11 282 4.2E-110 T 20-04-2016 AMC99_RS12075 5951f36bb08b44d0848b199e83ed5071 142 SUPERFAMILY SSF53927 1 142 3.54E-47 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMC99_RS12075 5951f36bb08b44d0848b199e83ed5071 142 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 142 43.467 T 20-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 AMC99_RS12075 5951f36bb08b44d0848b199e83ed5071 142 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 46 83 - T 20-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMC99_RS12075 5951f36bb08b44d0848b199e83ed5071 142 Pfam PF14437 MafB19-like deaminase 1 142 2.6E-27 T 20-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 AMC99_RS12075 5951f36bb08b44d0848b199e83ed5071 142 Gene3D G3DSA:3.40.140.10 1 141 2.4E-51 T 20-04-2016 AMC99_RS12075 5951f36bb08b44d0848b199e83ed5071 142 PANTHER PTHR11079 1 142 7.6E-40 T 20-04-2016 AMC99_RS08740 8f6fef25bb7c60e42f82989153775d21 370 Gene3D G3DSA:3.90.180.10 19 172 2.1E-24 T 20-04-2016 IPR011032 GroES-like AMC99_RS08740 8f6fef25bb7c60e42f82989153775d21 370 SMART SM00829 16 366 4.7E-5 T 20-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_RS08740 8f6fef25bb7c60e42f82989153775d21 370 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 127 1.4E-4 T 20-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_RS08740 8f6fef25bb7c60e42f82989153775d21 370 PANTHER PTHR11695:SF28 83 258 2.5E-47 T 20-04-2016 AMC99_RS08740 8f6fef25bb7c60e42f82989153775d21 370 PANTHER PTHR11695:SF28 20 55 2.5E-47 T 20-04-2016 AMC99_RS08740 8f6fef25bb7c60e42f82989153775d21 370 SUPERFAMILY SSF51735 140 258 1.06E-17 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08740 8f6fef25bb7c60e42f82989153775d21 370 Gene3D G3DSA:3.40.50.720 173 258 3.3E-10 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08740 8f6fef25bb7c60e42f82989153775d21 370 PANTHER PTHR11695 83 258 2.5E-47 T 20-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMC99_RS08740 8f6fef25bb7c60e42f82989153775d21 370 PANTHER PTHR11695 20 55 2.5E-47 T 20-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMC99_RS08740 8f6fef25bb7c60e42f82989153775d21 370 SUPERFAMILY SSF50129 19 180 5.45E-22 T 20-04-2016 IPR011032 GroES-like AMC99_RS08740 8f6fef25bb7c60e42f82989153775d21 370 Pfam PF00107 Zinc-binding dehydrogenase 179 256 3.3E-8 T 20-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_RS04165 34f86aba4868aee2469b1114af0a1b20 402 Pfam PF01546 Peptidase family M20/M25/M40 96 392 4.6E-20 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMC99_RS04165 34f86aba4868aee2469b1114af0a1b20 402 SUPERFAMILY SSF55031 203 312 8.11E-21 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS04165 34f86aba4868aee2469b1114af0a1b20 402 PANTHER PTHR11014:SF64 15 401 7.8E-63 T 20-04-2016 AMC99_RS04165 34f86aba4868aee2469b1114af0a1b20 402 PANTHER PTHR11014 15 401 7.8E-63 T 20-04-2016 AMC99_RS04165 34f86aba4868aee2469b1114af0a1b20 402 SUPERFAMILY SSF53187 13 211 6.29E-42 T 20-04-2016 AMC99_RS04165 34f86aba4868aee2469b1114af0a1b20 402 SUPERFAMILY SSF53187 322 397 6.29E-42 T 20-04-2016 AMC99_RS04165 34f86aba4868aee2469b1114af0a1b20 402 Gene3D G3DSA:3.30.70.360 203 303 9.6E-23 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS04165 34f86aba4868aee2469b1114af0a1b20 402 Pfam PF07687 Peptidase dimerisation domain 200 296 4.2E-18 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS04165 34f86aba4868aee2469b1114af0a1b20 402 Gene3D G3DSA:3.40.630.10 14 202 1.2E-39 T 20-04-2016 AMC99_RS04165 34f86aba4868aee2469b1114af0a1b20 402 Gene3D G3DSA:3.40.630.10 311 397 1.2E-39 T 20-04-2016 AMC99_RS04165 34f86aba4868aee2469b1114af0a1b20 402 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 95 104 - T 20-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMC99_RS04165 34f86aba4868aee2469b1114af0a1b20 402 PIRSF PIRSF037238 5 397 5.0E-87 T 20-04-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase AMC99_RS07655 57a95c63ef9a8ce64c3a03015f2d6e80 393 PANTHER PTHR13696 81 384 3.3E-18 T 20-04-2016 AMC99_RS07655 57a95c63ef9a8ce64c3a03015f2d6e80 393 Gene3D G3DSA:3.40.50.2300 62 136 2.8E-7 T 20-04-2016 AMC99_RS07655 57a95c63ef9a8ce64c3a03015f2d6e80 393 SUPERFAMILY SSF52172 46 134 1.46E-8 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS07655 57a95c63ef9a8ce64c3a03015f2d6e80 393 SUPERFAMILY SSF52540 148 389 9.27E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07655 57a95c63ef9a8ce64c3a03015f2d6e80 393 PANTHER PTHR13696:SF68 81 384 3.3E-18 T 20-04-2016 AMC99_RS07655 57a95c63ef9a8ce64c3a03015f2d6e80 393 Gene3D G3DSA:3.40.50.300 154 386 1.7E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07655 57a95c63ef9a8ce64c3a03015f2d6e80 393 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 154 334 3.3E-9 T 20-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMC99_RS02505 07df007550f6770adc085fab9f2dfb06 449 Pfam PF02530 Porin subfamily 147 431 1.1E-10 T 20-04-2016 IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 AMC99_RS02505 07df007550f6770adc085fab9f2dfb06 449 Gene3D G3DSA:2.40.160.10 390 449 3.5E-6 T 20-04-2016 IPR023614 Porin domain AMC99_RS02505 07df007550f6770adc085fab9f2dfb06 449 Gene3D G3DSA:2.40.160.10 146 342 3.5E-6 T 20-04-2016 IPR023614 Porin domain AMC99_RS02505 07df007550f6770adc085fab9f2dfb06 449 SUPERFAMILY SSF56935 146 449 3.44E-28 T 20-04-2016 AMC99_RS02505 07df007550f6770adc085fab9f2dfb06 449 SUPERFAMILY SSF56935 94 117 3.44E-28 T 20-04-2016 AMC99_RS07065 09d7f5c04914217d3cf005d81601007f 386 Gene3D G3DSA:3.90.380.10 275 364 4.0E-4 T 20-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AMC99_RS07065 09d7f5c04914217d3cf005d81601007f 386 Gene3D G3DSA:3.90.380.10 204 230 3.1E-4 T 20-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AMC99_RS07065 09d7f5c04914217d3cf005d81601007f 386 PANTHER PTHR21266 38 384 4.1E-49 T 20-04-2016 AMC99_RS07065 09d7f5c04914217d3cf005d81601007f 386 PANTHER PTHR21266:SF2 38 384 4.1E-49 T 20-04-2016 AMC99_RS07065 09d7f5c04914217d3cf005d81601007f 386 SUPERFAMILY SSF55961 198 384 1.73E-28 T 20-04-2016 AMC99_RS07065 09d7f5c04914217d3cf005d81601007f 386 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 96 116 2.7E-7 T 20-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AMC99_RS07065 09d7f5c04914217d3cf005d81601007f 386 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 118 138 2.7E-7 T 20-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AMC99_RS07065 09d7f5c04914217d3cf005d81601007f 386 Pfam PF00355 Rieske [2Fe-2S] domain 63 145 7.8E-16 T 20-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMC99_RS07065 09d7f5c04914217d3cf005d81601007f 386 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 204 382 2.0E-26 T 20-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AMC99_RS07065 09d7f5c04914217d3cf005d81601007f 386 Gene3D G3DSA:2.102.10.10 62 174 1.3E-28 T 20-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMC99_RS07065 09d7f5c04914217d3cf005d81601007f 386 SUPERFAMILY SSF50022 35 171 2.49E-40 T 20-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMC99_RS08395 9ec86e99bae2dd21c26be895c3a7342f 267 Gene3D G3DSA:3.30.200.20 6 93 1.4E-38 T 20-04-2016 AMC99_RS08395 9ec86e99bae2dd21c26be895c3a7342f 267 Pfam PF01259 SAICAR synthetase 6 235 2.6E-62 T 20-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMC99_RS08395 9ec86e99bae2dd21c26be895c3a7342f 267 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 20-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMC99_RS08395 9ec86e99bae2dd21c26be895c3a7342f 267 SUPERFAMILY SSF56104 4 236 1.77E-78 T 20-04-2016 AMC99_RS08395 9ec86e99bae2dd21c26be895c3a7342f 267 PANTHER PTHR11609:SF2 3 237 5.8E-114 T 20-04-2016 AMC99_RS08395 9ec86e99bae2dd21c26be895c3a7342f 267 PANTHER PTHR11609 3 237 5.8E-114 T 20-04-2016 AMC99_RS08395 9ec86e99bae2dd21c26be895c3a7342f 267 Gene3D G3DSA:3.30.470.20 94 223 6.6E-50 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMC99_RS08395 9ec86e99bae2dd21c26be895c3a7342f 267 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 238 32.125 T 20-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMC99_RS08395 9ec86e99bae2dd21c26be895c3a7342f 267 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 20-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMC99_RS08395 9ec86e99bae2dd21c26be895c3a7342f 267 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 237 5.4E-66 T 20-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMC99_RS13130 c93fd660d7098205c9b50fd8be926209 276 Gene3D G3DSA:3.30.540.10 6 149 1.0E-47 T 20-04-2016 AMC99_RS13130 c93fd660d7098205c9b50fd8be926209 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 204 228 1.6E-24 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS13130 c93fd660d7098205c9b50fd8be926209 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 1.6E-24 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS13130 c93fd660d7098205c9b50fd8be926209 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 128 151 1.6E-24 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS13130 c93fd660d7098205c9b50fd8be926209 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 1.6E-24 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS13130 c93fd660d7098205c9b50fd8be926209 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 79 95 1.6E-24 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS13130 c93fd660d7098205c9b50fd8be926209 276 SUPERFAMILY SSF56655 5 255 1.7E-75 T 20-04-2016 AMC99_RS13130 c93fd660d7098205c9b50fd8be926209 276 PANTHER PTHR20854:SF38 1 273 2.1E-103 T 20-04-2016 AMC99_RS13130 c93fd660d7098205c9b50fd8be926209 276 Gene3D G3DSA:3.40.190.80 150 258 7.5E-22 T 20-04-2016 AMC99_RS13130 c93fd660d7098205c9b50fd8be926209 276 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 7 255 3.2E-86 T 20-04-2016 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 AMC99_RS13130 c93fd660d7098205c9b50fd8be926209 276 Pfam PF00459 Inositol monophosphatase family 4 241 8.2E-52 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS13130 c93fd660d7098205c9b50fd8be926209 276 PANTHER PTHR20854 1 273 2.1E-103 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS10120 7e759bf27c1b27402c8c8936b13b3f7a 106 TIGRFAM TIGR04433 UrcA_uranyl: UrcA family protein 7 84 3.2E-9 T 20-04-2016 IPR030972 UrcA family protein AMC99_RS08295 80ce295b5fc8e75d451b26cf5478ebcf 115 PIRSF PIRSF016789 1 115 7.8E-31 T 20-04-2016 IPR007401 Protein of unknown function DUF454 AMC99_RS08295 80ce295b5fc8e75d451b26cf5478ebcf 115 Pfam PF04304 Protein of unknown function (DUF454) 2 111 3.0E-35 T 20-04-2016 IPR007401 Protein of unknown function DUF454 AMC99_RS08295 80ce295b5fc8e75d451b26cf5478ebcf 115 PANTHER PTHR35813:SF1 1 109 9.6E-28 T 20-04-2016 AMC99_RS08295 80ce295b5fc8e75d451b26cf5478ebcf 115 PANTHER PTHR35813 1 109 9.6E-28 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 4 40 2.2E-17 T 20-04-2016 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 Gene3D G3DSA:2.40.40.20 1056 1234 3.8E-40 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 Pfam PF01568 Molydopterin dinucleotide binding domain 1087 1201 3.2E-22 T 20-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 PANTHER PTHR11615 852 877 0.0 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 PANTHER PTHR11615 996 1229 0.0 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 PANTHER PTHR11615 34 412 0.0 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 PANTHER PTHR11615 697 836 0.0 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 777 794 - T 20-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 SUPERFAMILY SSF50692 1082 1236 1.15E-44 T 20-04-2016 IPR009010 Aspartate decarboxylase-like domain AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 Gene3D G3DSA:3.40.228.10 217 331 3.4E-80 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 Gene3D G3DSA:3.40.228.10 483 592 3.4E-80 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 Gene3D G3DSA:3.90.55.10 780 836 4.9E-7 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 PANTHER PTHR11615:SF165 852 877 0.0 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 PANTHER PTHR11615:SF165 996 1229 0.0 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 PANTHER PTHR11615:SF165 34 412 0.0 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 PANTHER PTHR11615:SF165 697 836 0.0 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 Gene3D G3DSA:2.20.25.90 52 98 6.9E-32 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 SUPERFAMILY SSF53706 13 1070 0.0 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 Pfam PF00384 Molybdopterin oxidoreductase 108 833 1.6E-152 T 20-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 SMART SM00926 43 105 3.7E-8 T 20-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1235 0.0 T 20-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 Gene3D G3DSA:3.40.50.740 108 203 2.3E-5 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 Gene3D G3DSA:3.40.50.740 593 779 9.0E-68 T 20-04-2016 AMC99_RS00650 7389f6d41744f6fa13009992bcca7a69 1245 Gene3D G3DSA:4.10.1200.10 1 25 5.6E-9 T 20-04-2016 AMC99_RS05070 c5dc217fbb228d603f1e24c8b48e95d5 171 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 10 85 7.0E-33 T 20-04-2016 AMC99_RS05070 c5dc217fbb228d603f1e24c8b48e95d5 171 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 10 167 4.8E-53 T 20-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS05070 c5dc217fbb228d603f1e24c8b48e95d5 171 SUPERFAMILY SSF55021 89 169 4.35E-25 T 20-04-2016 AMC99_RS05070 c5dc217fbb228d603f1e24c8b48e95d5 171 SUPERFAMILY SSF55021 10 85 3.05E-17 T 20-04-2016 AMC99_RS05070 c5dc217fbb228d603f1e24c8b48e95d5 171 Gene3D G3DSA:3.30.70.1150 93 169 2.8E-27 T 20-04-2016 AMC99_RS05070 c5dc217fbb228d603f1e24c8b48e95d5 171 Pfam PF01842 ACT domain 11 76 2.5E-11 T 20-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMC99_RS05070 c5dc217fbb228d603f1e24c8b48e95d5 171 Pfam PF10369 Small subunit of acetolactate synthase 94 167 1.8E-24 T 20-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS05070 c5dc217fbb228d603f1e24c8b48e95d5 171 PANTHER PTHR30239 1 171 7.1E-67 T 20-04-2016 AMC99_RS05070 c5dc217fbb228d603f1e24c8b48e95d5 171 Gene3D G3DSA:3.30.70.260 9 87 3.6E-29 T 20-04-2016 AMC99_RS04170 d4b313de8960d9e1f78255881ab2a929 698 Gene3D G3DSA:1.10.1860.10 3 88 4.9E-30 T 20-04-2016 AMC99_RS04170 d4b313de8960d9e1f78255881ab2a929 698 PANTHER PTHR21631:SF7 31 41 4.6E-124 T 20-04-2016 AMC99_RS04170 d4b313de8960d9e1f78255881ab2a929 698 Hamap MF_00641 Malate synthase G [glcB]. 1 698 343.962 T 20-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMC99_RS04170 d4b313de8960d9e1f78255881ab2a929 698 PANTHER PTHR21631 31 41 4.6E-124 T 20-04-2016 AMC99_RS04170 d4b313de8960d9e1f78255881ab2a929 698 PANTHER PTHR21631:SF7 480 697 4.6E-124 T 20-04-2016 AMC99_RS04170 d4b313de8960d9e1f78255881ab2a929 698 Gene3D G3DSA:2.170.170.11 277 314 1.8E-42 T 20-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMC99_RS04170 d4b313de8960d9e1f78255881ab2a929 698 Gene3D G3DSA:2.170.170.11 136 243 1.8E-42 T 20-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMC99_RS04170 d4b313de8960d9e1f78255881ab2a929 698 PANTHER PTHR21631 480 697 4.6E-124 T 20-04-2016 AMC99_RS04170 d4b313de8960d9e1f78255881ab2a929 698 Pfam PF01274 Malate synthase 22 657 4.4E-171 T 20-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMC99_RS04170 d4b313de8960d9e1f78255881ab2a929 698 SUPERFAMILY SSF51645 3 697 8.76E-279 T 20-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMC99_RS04170 d4b313de8960d9e1f78255881ab2a929 698 Gene3D G3DSA:1.20.1220.12 567 697 7.8E-69 T 20-04-2016 AMC99_RS04170 d4b313de8960d9e1f78255881ab2a929 698 Gene3D G3DSA:3.20.20.360 245 275 1.1E-136 T 20-04-2016 AMC99_RS04170 d4b313de8960d9e1f78255881ab2a929 698 Gene3D G3DSA:3.20.20.360 89 135 1.1E-136 T 20-04-2016 AMC99_RS04170 d4b313de8960d9e1f78255881ab2a929 698 Gene3D G3DSA:3.20.20.360 315 564 1.1E-136 T 20-04-2016 AMC99_RS04170 d4b313de8960d9e1f78255881ab2a929 698 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 697 0.0 T 20-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMC99_RS02530 c5b823d4a38d5675cfc2be3320553061 191 Pfam PF02545 Maf-like protein 6 185 2.8E-49 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 AMC99_RS02530 c5b823d4a38d5675cfc2be3320553061 191 SUPERFAMILY SSF52972 4 184 2.94E-54 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMC99_RS02530 c5b823d4a38d5675cfc2be3320553061 191 Hamap MF_00528 Septum formation protein Maf [maf]. 5 190 31.468 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 AMC99_RS02530 c5b823d4a38d5675cfc2be3320553061 191 PIRSF PIRSF006305 1 190 5.6E-47 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 AMC99_RS02530 c5b823d4a38d5675cfc2be3320553061 191 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 184 6.6E-45 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 AMC99_RS02530 c5b823d4a38d5675cfc2be3320553061 191 Gene3D G3DSA:3.90.950.10 4 188 2.6E-59 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMC99_RS01075 34bd440f9d1e74a0ebdf312ccfcf1806 130 Pfam PF00825 Ribonuclease P 2 101 1.9E-21 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMC99_RS01075 34bd440f9d1e74a0ebdf312ccfcf1806 130 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 11 102 2.1E-16 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMC99_RS01075 34bd440f9d1e74a0ebdf312ccfcf1806 130 SUPERFAMILY SSF54211 1 102 3.03E-24 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS01075 34bd440f9d1e74a0ebdf312ccfcf1806 130 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 20 94 4.0E-9 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMC99_RS01075 34bd440f9d1e74a0ebdf312ccfcf1806 130 Gene3D G3DSA:3.30.230.10 1 102 5.4E-27 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_RS01075 34bd440f9d1e74a0ebdf312ccfcf1806 130 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 13.128 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMC99_RS01075 34bd440f9d1e74a0ebdf312ccfcf1806 130 PANTHER PTHR33992 1 123 1.6E-25 T 20-04-2016 AMC99_RS05900 13b522edffab07a4ab44a11d7b36ccf5 287 SUPERFAMILY SSF82861 21 106 2.88E-9 T 20-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMC99_RS05900 13b522edffab07a4ab44a11d7b36ccf5 287 Gene3D G3DSA:2.30.30.60 124 169 8.7E-15 T 20-04-2016 AMC99_RS05900 13b522edffab07a4ab44a11d7b36ccf5 287 Pfam PF00924 Mechanosensitive ion channel 63 264 1.8E-45 T 20-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMC99_RS05900 13b522edffab07a4ab44a11d7b36ccf5 287 SUPERFAMILY SSF50182 107 169 1.24E-14 T 20-04-2016 IPR010920 LSM domain AMC99_RS05900 13b522edffab07a4ab44a11d7b36ccf5 287 SUPERFAMILY SSF82689 176 274 1.7E-23 T 20-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMC99_RS05900 13b522edffab07a4ab44a11d7b36ccf5 287 Pfam PF05552 Conserved TM helix 9 53 6.7E-7 T 20-04-2016 IPR008910 Conserved TM helix AMC99_RS05900 13b522edffab07a4ab44a11d7b36ccf5 287 PANTHER PTHR30221:SF7 2 275 1.7E-79 T 20-04-2016 AMC99_RS05900 13b522edffab07a4ab44a11d7b36ccf5 287 Gene3D G3DSA:3.30.70.100 176 262 6.1E-19 T 20-04-2016 AMC99_RS05900 13b522edffab07a4ab44a11d7b36ccf5 287 PANTHER PTHR30221 2 275 1.7E-79 T 20-04-2016 AMC99_RS03790 d490cbd2c4ec0659cebe34b8545f5b3a 225 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 21 32 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_RS03790 d490cbd2c4ec0659cebe34b8545f5b3a 225 Pfam PF13183 4Fe-4S dicluster domain 18 80 7.7E-8 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_RS03790 d490cbd2c4ec0659cebe34b8545f5b3a 225 PANTHER PTHR11921 8 221 2.2E-66 T 20-04-2016 AMC99_RS03790 d490cbd2c4ec0659cebe34b8545f5b3a 225 PANTHER PTHR11921:SF25 8 221 2.2E-66 T 20-04-2016 AMC99_RS03790 d490cbd2c4ec0659cebe34b8545f5b3a 225 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 67 78 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_RS03790 d490cbd2c4ec0659cebe34b8545f5b3a 225 SUPERFAMILY SSF46548 10 98 2.09E-15 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMC99_RS03790 d490cbd2c4ec0659cebe34b8545f5b3a 225 Gene3D G3DSA:1.10.1060.10 16 100 3.3E-14 T 20-04-2016 AMC99_RS05315 bf2a702a7707417a10ad19bae65e2e56 372 PANTHER PTHR30474 14 360 1.2E-122 T 20-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AMC99_RS05315 bf2a702a7707417a10ad19bae65e2e56 372 PANTHER PTHR30474:SF1 14 360 1.2E-122 T 20-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 AMC99_RS05315 bf2a702a7707417a10ad19bae65e2e56 372 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 14 361 2.1E-122 T 20-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 AMC99_RS05315 bf2a702a7707417a10ad19bae65e2e56 372 Pfam PF01098 Cell cycle protein 17 362 9.9E-93 T 20-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AMC99_RS11785 7f4171737778bfbfba1078f025fc4cfa 330 Pfam PF00296 Luciferase-like monooxygenase 23 303 1.4E-35 T 20-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMC99_RS11785 7f4171737778bfbfba1078f025fc4cfa 330 PANTHER PTHR30137:SF2 2 329 1.4E-116 T 20-04-2016 AMC99_RS11785 7f4171737778bfbfba1078f025fc4cfa 330 Gene3D G3DSA:3.20.20.30 6 327 2.2E-89 T 20-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMC99_RS11785 7f4171737778bfbfba1078f025fc4cfa 330 PANTHER PTHR30137 2 329 1.4E-116 T 20-04-2016 AMC99_RS11785 7f4171737778bfbfba1078f025fc4cfa 330 SUPERFAMILY SSF51679 6 328 1.7E-82 T 20-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMC99_RS11785 7f4171737778bfbfba1078f025fc4cfa 330 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 7 326 1.9E-125 T 20-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 Gene3D G3DSA:3.30.70.240 402 481 5.5E-30 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 Gene3D G3DSA:3.40.50.300 4 204 6.6E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 SUPERFAMILY SSF54980 303 388 1.63E-12 T 20-04-2016 IPR009022 Elongation factor G, III-V domain AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 SUPERFAMILY SSF50447 151 299 1.87E-26 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 PANTHER PTHR23115:SF14 5 593 2.7E-264 T 20-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 3.1E-279 T 20-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 Gene3D G3DSA:3.30.70.870 304 401 1.1E-35 T 20-04-2016 AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 154 5.7E-24 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 Pfam PF00679 Elongation factor G C-terminus 398 478 2.5E-19 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 SUPERFAMILY SSF52540 4 205 1.38E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 Gene3D G3DSA:2.40.30.10 205 303 6.4E-21 T 20-04-2016 AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 PRINTS PR00315 GTP-binding elongation factor signature 7 20 4.9E-15 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 PRINTS PR00315 GTP-binding elongation factor signature 87 98 4.9E-15 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 PRINTS PR00315 GTP-binding elongation factor signature 51 59 4.9E-15 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 PRINTS PR00315 GTP-binding elongation factor signature 71 81 4.9E-15 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 PRINTS PR00315 GTP-binding elongation factor signature 123 132 4.9E-15 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 Pfam PF03144 Elongation factor Tu domain 2 219 289 3.6E-9 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 Gene3D G3DSA:2.40.50.250 483 577 2.4E-38 T 20-04-2016 AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 PANTHER PTHR23115 5 593 2.7E-264 T 20-04-2016 AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 SUPERFAMILY SSF54980 399 513 1.82E-24 T 20-04-2016 IPR009022 Elongation factor G, III-V domain AMC99_RS04070 ce718396295cdd66f1c1f96cbe5d5746 606 Pfam PF00009 Elongation factor Tu GTP binding domain 5 195 3.4E-53 T 20-04-2016 AMC99_RS08575 6b349c7235d89fa660872728d0016316 390 Gene3D G3DSA:2.120.10.30 27 389 4.7E-82 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMC99_RS08575 6b349c7235d89fa660872728d0016316 390 PANTHER PTHR19328 37 380 1.2E-42 T 20-04-2016 AMC99_RS08575 6b349c7235d89fa660872728d0016316 390 Pfam PF07995 Glucose / Sorbosone dehydrogenase 45 386 7.1E-107 T 20-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 AMC99_RS08575 6b349c7235d89fa660872728d0016316 390 SUPERFAMILY SSF50952 34 387 1.44E-28 T 20-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMC99_RS12095 abca22fd89275796bea5af072dac033b 67 Pfam PF09866 Uncharacterized protein conserved in bacteria (DUF2093) 21 62 9.3E-23 T 20-04-2016 IPR018661 Protein of unknown function DUF2093 AMC99_RS11470 eea033d76c790497278d9b1fa35b42a2 166 SUPERFAMILY SSF55729 5 139 1.68E-25 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS11470 eea033d76c790497278d9b1fa35b42a2 166 PANTHER PTHR23091:SF237 1 145 2.6E-27 T 20-04-2016 AMC99_RS11470 eea033d76c790497278d9b1fa35b42a2 166 Gene3D G3DSA:3.40.630.30 2 135 3.2E-20 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS11470 eea033d76c790497278d9b1fa35b42a2 166 Pfam PF00583 Acetyltransferase (GNAT) family 54 130 5.3E-9 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS11470 eea033d76c790497278d9b1fa35b42a2 166 PANTHER PTHR23091 1 145 2.6E-27 T 20-04-2016 AMC99_RS02270 43f1f00ccdd545a073202e1ad5febd1e 345 Gene3D G3DSA:3.90.1200.10 112 311 5.2E-33 T 20-04-2016 AMC99_RS02270 43f1f00ccdd545a073202e1ad5febd1e 345 Pfam PF01636 Phosphotransferase enzyme family 32 254 5.9E-57 T 20-04-2016 IPR002575 Aminoglycoside phosphotransferase AMC99_RS02270 43f1f00ccdd545a073202e1ad5febd1e 345 PANTHER PTHR21310:SF14 38 247 8.0E-18 T 20-04-2016 AMC99_RS02270 43f1f00ccdd545a073202e1ad5febd1e 345 SUPERFAMILY SSF56112 8 339 5.25E-66 T 20-04-2016 IPR011009 Protein kinase-like domain AMC99_RS02270 43f1f00ccdd545a073202e1ad5febd1e 345 PANTHER PTHR21310 38 247 8.0E-18 T 20-04-2016 AMC99_RS02800 e7496241c1819a9e60dfba739d5a483e 123 Gene3D G3DSA:3.30.1130.10 7 123 2.5E-17 T 20-04-2016 AMC99_RS02800 e7496241c1819a9e60dfba739d5a483e 123 Pfam PF02152 Dihydroneopterin aldolase 8 118 1.7E-16 T 20-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMC99_RS02800 e7496241c1819a9e60dfba739d5a483e 123 TIGRFAM TIGR00526 folB_dom: FolB domain 7 123 1.6E-13 T 20-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMC99_RS02800 e7496241c1819a9e60dfba739d5a483e 123 SUPERFAMILY SSF55620 7 122 1.39E-16 T 20-04-2016 AMC99_RS02800 e7496241c1819a9e60dfba739d5a483e 123 SMART SM00905 7 120 2.1E-16 T 20-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMC99_RS10475 74b300a8841406a4aaa8e019e7447ab9 300 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 234 251 4.4E-5 T 20-04-2016 AMC99_RS10475 74b300a8841406a4aaa8e019e7447ab9 300 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 205 231 4.4E-5 T 20-04-2016 AMC99_RS10475 74b300a8841406a4aaa8e019e7447ab9 300 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 274 294 4.4E-5 T 20-04-2016 AMC99_RS10475 74b300a8841406a4aaa8e019e7447ab9 300 Gene3D G3DSA:3.30.1330.60 178 291 7.3E-30 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS10475 74b300a8841406a4aaa8e019e7447ab9 300 PANTHER PTHR30128 186 292 2.8E-27 T 20-04-2016 AMC99_RS10475 74b300a8841406a4aaa8e019e7447ab9 300 Pfam PF00691 OmpA family 188 285 1.2E-17 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS10475 74b300a8841406a4aaa8e019e7447ab9 300 SUPERFAMILY SSF103088 178 291 2.35E-29 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS10475 74b300a8841406a4aaa8e019e7447ab9 300 PRINTS PR01021 OMPA domain signature 219 234 1.1E-10 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_RS10475 74b300a8841406a4aaa8e019e7447ab9 300 PRINTS PR01021 OMPA domain signature 234 250 1.1E-10 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_RS10475 74b300a8841406a4aaa8e019e7447ab9 300 PRINTS PR01021 OMPA domain signature 189 211 1.1E-10 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_RS09870 591e43b09cfbdcb9028efb44f0e4ac8c 685 SUPERFAMILY SSF56935 48 683 1.28E-83 T 20-04-2016 AMC99_RS09870 591e43b09cfbdcb9028efb44f0e4ac8c 685 PANTHER PTHR32552 14 420 1.0E-22 T 20-04-2016 AMC99_RS09870 591e43b09cfbdcb9028efb44f0e4ac8c 685 PANTHER PTHR32552 436 685 1.0E-22 T 20-04-2016 AMC99_RS09870 591e43b09cfbdcb9028efb44f0e4ac8c 685 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 172 9.8E-14 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS09870 591e43b09cfbdcb9028efb44f0e4ac8c 685 Pfam PF00593 TonB dependent receptor 457 682 2.5E-26 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS09870 591e43b09cfbdcb9028efb44f0e4ac8c 685 Gene3D G3DSA:2.40.170.20 185 682 1.5E-64 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS09870 591e43b09cfbdcb9028efb44f0e4ac8c 685 Gene3D G3DSA:2.170.130.10 41 180 1.5E-16 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS04490 e57d09ed99ac5d2a11f752b8a5f1a041 718 Pfam PF02310 B12 binding domain 579 692 2.4E-13 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMC99_RS04490 e57d09ed99ac5d2a11f752b8a5f1a041 718 Pfam PF01642 Methylmalonyl-CoA mutase 27 537 5.8E-235 T 20-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 AMC99_RS04490 e57d09ed99ac5d2a11f752b8a5f1a041 718 PANTHER PTHR23408:SF1 1 683 0.0 T 20-04-2016 AMC99_RS04490 e57d09ed99ac5d2a11f752b8a5f1a041 718 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 577 702 4.2E-50 T 20-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 AMC99_RS04490 e57d09ed99ac5d2a11f752b8a5f1a041 718 Gene3D G3DSA:3.20.20.240 25 490 3.8E-210 T 20-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 AMC99_RS04490 e57d09ed99ac5d2a11f752b8a5f1a041 718 Gene3D G3DSA:3.40.50.280 546 702 7.3E-63 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMC99_RS04490 e57d09ed99ac5d2a11f752b8a5f1a041 718 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 367 392 - T 20-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 AMC99_RS04490 e57d09ed99ac5d2a11f752b8a5f1a041 718 PANTHER PTHR23408 1 683 0.0 T 20-04-2016 AMC99_RS04490 e57d09ed99ac5d2a11f752b8a5f1a041 718 SUPERFAMILY SSF52242 545 702 6.93E-53 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMC99_RS04490 e57d09ed99ac5d2a11f752b8a5f1a041 718 SUPERFAMILY SSF51703 7 539 2.15E-221 T 20-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 AMC99_RS04490 e57d09ed99ac5d2a11f752b8a5f1a041 718 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 26 541 3.1E-261 T 20-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 AMC99_RS09825 abfbf079840dd59ab122ba0c98c1bdfe 170 Gene3D G3DSA:1.10.1220.10 105 153 5.7E-5 T 20-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AMC99_RS09825 abfbf079840dd59ab122ba0c98c1bdfe 170 SUPERFAMILY SSF47598 104 154 1.06E-5 T 20-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 AMC99_RS05370 f54fd5d15ef1ada49aa91b9ca4baebcf 189 PANTHER PTHR17224 6 163 7.7E-61 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMC99_RS05370 f54fd5d15ef1ada49aa91b9ca4baebcf 189 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 176 31.538 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMC99_RS05370 f54fd5d15ef1ada49aa91b9ca4baebcf 189 Pfam PF01195 Peptidyl-tRNA hydrolase 5 163 6.6E-47 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMC99_RS05370 f54fd5d15ef1ada49aa91b9ca4baebcf 189 SUPERFAMILY SSF53178 1 182 9.02E-62 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMC99_RS05370 f54fd5d15ef1ada49aa91b9ca4baebcf 189 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 20-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AMC99_RS05370 f54fd5d15ef1ada49aa91b9ca4baebcf 189 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 162 4.0E-52 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMC99_RS05370 f54fd5d15ef1ada49aa91b9ca4baebcf 189 Gene3D G3DSA:3.40.50.1470 1 180 1.2E-61 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMC99_RS03470 1e330a5721268c6746efd3441b8e379d 391 SMART SM00729 112 330 3.4E-52 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMC99_RS03470 1e330a5721268c6746efd3441b8e379d 391 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 354 1.1E-88 T 20-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AMC99_RS03470 1e330a5721268c6746efd3441b8e379d 391 Pfam PF04055 Radical SAM superfamily 118 285 7.8E-20 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_RS03470 1e330a5721268c6746efd3441b8e379d 391 Pfam PF00919 Uncharacterized protein family UPF0004 6 85 2.1E-13 T 20-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AMC99_RS03470 1e330a5721268c6746efd3441b8e379d 391 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 7 371 1.4E-107 T 20-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 AMC99_RS03470 1e330a5721268c6746efd3441b8e379d 391 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 116 136 - T 20-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMC99_RS03470 1e330a5721268c6746efd3441b8e379d 391 PANTHER PTHR11918 6 353 1.1E-93 T 20-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein AMC99_RS03470 1e330a5721268c6746efd3441b8e379d 391 SUPERFAMILY SSF102114 101 334 3.53E-50 T 20-04-2016 AMC99_RS03470 1e330a5721268c6746efd3441b8e379d 391 Gene3D G3DSA:3.80.30.20 111 336 2.3E-65 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMC99_RS07935 cbb7263e6287f43b6ebf841a5f3f3924 436 Pfam PF00144 Beta-lactamase 52 423 1.4E-51 T 20-04-2016 IPR001466 Beta-lactamase-related AMC99_RS07935 cbb7263e6287f43b6ebf841a5f3f3924 436 PANTHER PTHR22935:SF77 49 431 8.5E-62 T 20-04-2016 AMC99_RS07935 cbb7263e6287f43b6ebf841a5f3f3924 436 PANTHER PTHR22935 49 431 8.5E-62 T 20-04-2016 AMC99_RS07935 cbb7263e6287f43b6ebf841a5f3f3924 436 Gene3D G3DSA:3.40.710.10 46 424 3.3E-62 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS07935 cbb7263e6287f43b6ebf841a5f3f3924 436 SUPERFAMILY SSF56601 46 421 6.93E-70 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 Pfam PF13620 Carboxypeptidase regulatory-like domain 38 117 2.7E-21 T 20-04-2016 AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 PANTHER PTHR30069 3 257 1.7E-15 T 20-04-2016 AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 Gene3D G3DSA:2.170.130.10 123 237 1.3E-7 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 SUPERFAMILY SSF56935 802 849 2.56E-61 T 20-04-2016 AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 SUPERFAMILY SSF56935 670 751 2.56E-61 T 20-04-2016 AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 SUPERFAMILY SSF56935 877 920 2.56E-61 T 20-04-2016 AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 SUPERFAMILY SSF56935 124 260 2.56E-61 T 20-04-2016 AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 SUPERFAMILY SSF56935 292 620 2.56E-61 T 20-04-2016 AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 SUPERFAMILY SSF56935 948 1038 2.56E-61 T 20-04-2016 AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 Pfam PF07715 TonB-dependent Receptor Plug Domain 144 237 3.8E-5 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 Gene3D G3DSA:2.40.170.20 294 509 9.4E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 Gene3D G3DSA:2.40.170.20 698 1038 9.4E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 Gene3D G3DSA:2.40.170.20 238 249 9.4E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 Gene3D G3DSA:2.40.170.20 541 643 9.4E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 SUPERFAMILY SSF49464 38 121 2.75E-14 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain AMC99_RS09455 94649d6bbde002c1ed0309eb42252684 1038 Gene3D G3DSA:2.60.40.1120 38 120 5.6E-15 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain AMC99_RS01065 fb478ad44b8415a6e207c6a6971a009a 502 SUPERFAMILY SSF52540 185 498 8.79E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS01065 fb478ad44b8415a6e207c6a6971a009a 502 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 496 1.9E-29 T 20-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain AMC99_RS01065 fb478ad44b8415a6e207c6a6971a009a 502 SUPERFAMILY SSF54211 3 166 4.93E-27 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS01065 fb478ad44b8415a6e207c6a6971a009a 502 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 140 2.1E-38 T 20-04-2016 AMC99_RS01065 fb478ad44b8415a6e207c6a6971a009a 502 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 496 3.4E-160 T 20-04-2016 IPR004482 Mg chelatase-related protein AMC99_RS01065 fb478ad44b8415a6e207c6a6971a009a 502 Gene3D G3DSA:3.30.230.10 4 166 7.2E-24 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_RS01065 fb478ad44b8415a6e207c6a6971a009a 502 Gene3D G3DSA:3.40.50.300 187 386 6.8E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS01065 fb478ad44b8415a6e207c6a6971a009a 502 SMART SM00382 208 390 3.7E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS01065 fb478ad44b8415a6e207c6a6971a009a 502 PANTHER PTHR32039:SF7 1 496 7.0E-212 T 20-04-2016 IPR004482 Mg chelatase-related protein AMC99_RS01065 fb478ad44b8415a6e207c6a6971a009a 502 Pfam PF01078 Magnesium chelatase, subunit ChlI 188 391 1.2E-92 T 20-04-2016 IPR000523 Magnesium chelatase ChlI domain AMC99_RS01065 fb478ad44b8415a6e207c6a6971a009a 502 PANTHER PTHR32039 1 496 7.0E-212 T 20-04-2016 AMC99_RS10485 8190c158af92780d4800f1d64a2bcc3b 391 Gene3D G3DSA:3.40.640.10 45 311 1.2E-72 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS10485 8190c158af92780d4800f1d64a2bcc3b 391 Pfam PF00155 Aminotransferase class I and II 27 386 4.9E-59 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMC99_RS10485 8190c158af92780d4800f1d64a2bcc3b 391 PRINTS PR00799 Aspartate aminotransferase signature 171 190 2.5E-25 T 20-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMC99_RS10485 8190c158af92780d4800f1d64a2bcc3b 391 PRINTS PR00799 Aspartate aminotransferase signature 335 353 2.5E-25 T 20-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMC99_RS10485 8190c158af92780d4800f1d64a2bcc3b 391 PRINTS PR00799 Aspartate aminotransferase signature 269 294 2.5E-25 T 20-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMC99_RS10485 8190c158af92780d4800f1d64a2bcc3b 391 PRINTS PR00799 Aspartate aminotransferase signature 202 214 2.5E-25 T 20-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMC99_RS10485 8190c158af92780d4800f1d64a2bcc3b 391 SUPERFAMILY SSF53383 1 387 3.26E-90 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS10485 8190c158af92780d4800f1d64a2bcc3b 391 PANTHER PTHR11879 1 389 3.4E-118 T 20-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMC99_RS10485 8190c158af92780d4800f1d64a2bcc3b 391 PANTHER PTHR11879:SF11 1 389 3.4E-118 T 20-04-2016 AMC99_RS02450 a77aa5731830c59b2c1b66cabc87894c 446 PANTHER PTHR30562:SF6 5 396 2.6E-105 T 20-04-2016 AMC99_RS02450 a77aa5731830c59b2c1b66cabc87894c 446 PRINTS PR00084 Mannitol dehydrogenase signature 157 170 6.4E-14 T 20-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMC99_RS02450 a77aa5731830c59b2c1b66cabc87894c 446 PRINTS PR00084 Mannitol dehydrogenase signature 196 209 6.4E-14 T 20-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMC99_RS02450 a77aa5731830c59b2c1b66cabc87894c 446 PRINTS PR00084 Mannitol dehydrogenase signature 226 241 6.4E-14 T 20-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMC99_RS02450 a77aa5731830c59b2c1b66cabc87894c 446 PRINTS PR00084 Mannitol dehydrogenase signature 19 29 6.4E-14 T 20-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMC99_RS02450 a77aa5731830c59b2c1b66cabc87894c 446 PANTHER PTHR30562 5 396 2.6E-105 T 20-04-2016 AMC99_RS02450 a77aa5731830c59b2c1b66cabc87894c 446 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 197 385 5.3E-62 T 20-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AMC99_RS02450 a77aa5731830c59b2c1b66cabc87894c 446 SUPERFAMILY SSF51735 2 260 3.82E-78 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02450 a77aa5731830c59b2c1b66cabc87894c 446 SUPERFAMILY SSF48179 261 410 1.26E-45 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMC99_RS02450 a77aa5731830c59b2c1b66cabc87894c 446 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 18 166 1.7E-28 T 20-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AMC99_RS02450 a77aa5731830c59b2c1b66cabc87894c 446 Gene3D G3DSA:1.10.1040.10 260 408 3.0E-49 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMC99_RS02450 a77aa5731830c59b2c1b66cabc87894c 446 Gene3D G3DSA:3.40.50.720 2 259 3.3E-88 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09595 88c2c73f8318765e0f21ad37a13c34c6 215 PANTHER PTHR18901 3 215 2.7E-41 T 20-04-2016 AMC99_RS09595 88c2c73f8318765e0f21ad37a13c34c6 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 127 179 1.2E-6 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMC99_RS09595 88c2c73f8318765e0f21ad37a13c34c6 215 Gene3D G3DSA:1.10.150.240 23 71 6.0E-6 T 20-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 AMC99_RS09595 88c2c73f8318765e0f21ad37a13c34c6 215 Gene3D G3DSA:3.40.50.1000 72 215 4.6E-38 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS09595 88c2c73f8318765e0f21ad37a13c34c6 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 66 186 1.9E-8 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMC99_RS09595 88c2c73f8318765e0f21ad37a13c34c6 215 PANTHER PTHR18901:SF14 3 215 2.7E-41 T 20-04-2016 AMC99_RS09595 88c2c73f8318765e0f21ad37a13c34c6 215 SUPERFAMILY SSF56784 1 215 3.44E-52 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS09595 88c2c73f8318765e0f21ad37a13c34c6 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 186 2.0E-30 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS06125 321ad82d0cdcf3e36d0bf53893b481f4 403 Gene3D G3DSA:1.10.645.10 18 394 3.0E-62 T 20-04-2016 IPR029014 NiFe hydrogenase-like AMC99_RS06125 321ad82d0cdcf3e36d0bf53893b481f4 403 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 55 66 - T 20-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 AMC99_RS06125 321ad82d0cdcf3e36d0bf53893b481f4 403 PANTHER PTHR11993 13 398 1.0E-230 T 20-04-2016 AMC99_RS06125 321ad82d0cdcf3e36d0bf53893b481f4 403 PANTHER PTHR11993:SF10 13 398 1.0E-230 T 20-04-2016 AMC99_RS06125 321ad82d0cdcf3e36d0bf53893b481f4 403 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 5 403 48.401 T 20-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 AMC99_RS06125 321ad82d0cdcf3e36d0bf53893b481f4 403 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 18 403 3.6E-172 T 20-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 AMC99_RS06125 321ad82d0cdcf3e36d0bf53893b481f4 403 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 132 403 1.8E-116 T 20-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 AMC99_RS06125 321ad82d0cdcf3e36d0bf53893b481f4 403 SUPERFAMILY SSF56762 28 403 4.45E-134 T 20-04-2016 IPR029014 NiFe hydrogenase-like AMC99_RS02215 e1a398bb1913e30650236f536b2f8e02 421 Pfam PF01734 Patatin-like phospholipase 48 243 3.9E-14 T 20-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 AMC99_RS02215 e1a398bb1913e30650236f536b2f8e02 421 SUPERFAMILY SSF52151 43 242 4.45E-27 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMC99_RS02215 e1a398bb1913e30650236f536b2f8e02 421 Gene3D G3DSA:3.40.1090.10 37 253 4.0E-12 T 20-04-2016 AMC99_RS11395 192fd647a03788fd8690eb0912dd9e2b 730 PANTHER PTHR11757:SF3 41 728 9.2E-265 T 20-04-2016 AMC99_RS11395 192fd647a03788fd8690eb0912dd9e2b 730 PANTHER PTHR11757 41 728 9.2E-265 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_RS11395 192fd647a03788fd8690eb0912dd9e2b 730 Gene3D G3DSA:2.130.10.120 115 447 3.1E-100 T 20-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AMC99_RS11395 192fd647a03788fd8690eb0912dd9e2b 730 SUPERFAMILY SSF53474 454 700 3.61E-38 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS11395 192fd647a03788fd8690eb0912dd9e2b 730 SUPERFAMILY SSF50993 40 451 2.88E-93 T 20-04-2016 AMC99_RS11395 192fd647a03788fd8690eb0912dd9e2b 730 Gene3D G3DSA:3.40.50.1820 458 703 2.2E-30 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS11395 192fd647a03788fd8690eb0912dd9e2b 730 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 544 563 1.5E-47 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_RS11395 192fd647a03788fd8690eb0912dd9e2b 730 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 516 540 1.5E-47 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_RS11395 192fd647a03788fd8690eb0912dd9e2b 730 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 574 594 1.5E-47 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_RS11395 192fd647a03788fd8690eb0912dd9e2b 730 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 633 648 1.5E-47 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_RS11395 192fd647a03788fd8690eb0912dd9e2b 730 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 651 673 1.5E-47 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_RS11395 192fd647a03788fd8690eb0912dd9e2b 730 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 490 508 1.5E-47 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_RS11395 192fd647a03788fd8690eb0912dd9e2b 730 Pfam PF00326 Prolyl oligopeptidase family 506 722 1.1E-62 T 20-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMC99_RS11395 192fd647a03788fd8690eb0912dd9e2b 730 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 444 3.8E-89 T 20-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AMC99_RS02045 fcdeb2da75db533c6e8d11837c53f21c 360 SUPERFAMILY SSF56112 25 353 4.52E-60 T 20-04-2016 IPR011009 Protein kinase-like domain AMC99_RS02045 fcdeb2da75db533c6e8d11837c53f21c 360 Pfam PF01636 Phosphotransferase enzyme family 49 270 4.4E-49 T 20-04-2016 IPR002575 Aminoglycoside phosphotransferase AMC99_RS02045 fcdeb2da75db533c6e8d11837c53f21c 360 PANTHER PTHR21310 53 262 7.7E-14 T 20-04-2016 AMC99_RS02045 fcdeb2da75db533c6e8d11837c53f21c 360 PANTHER PTHR21310:SF14 53 262 7.7E-14 T 20-04-2016 AMC99_RS02045 fcdeb2da75db533c6e8d11837c53f21c 360 Gene3D G3DSA:3.90.1200.10 127 324 1.5E-30 T 20-04-2016 AMC99_RS06050 de48e9864e4ff7a56986b8baad663bae 530 SMART SM00849 1 196 1.1E-17 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS06050 de48e9864e4ff7a56986b8baad663bae 530 PANTHER PTHR11203 1 458 5.5E-138 T 20-04-2016 AMC99_RS06050 de48e9864e4ff7a56986b8baad663bae 530 SUPERFAMILY SSF56281 2 402 1.07E-71 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS06050 de48e9864e4ff7a56986b8baad663bae 530 PANTHER PTHR11203:SF22 1 458 5.5E-138 T 20-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 AMC99_RS06050 de48e9864e4ff7a56986b8baad663bae 530 Gene3D G3DSA:3.60.15.10 2 237 1.2E-57 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS06050 de48e9864e4ff7a56986b8baad663bae 530 Pfam PF00753 Metallo-beta-lactamase superfamily 9 156 1.4E-12 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS06050 de48e9864e4ff7a56986b8baad663bae 530 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 342 383 1.7E-7 T 20-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AMC99_RS12135 211b0e7570888b0570dadd4d8e4bf9ad 120 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 15 120 9.5E-29 T 20-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 AMC99_RS12135 211b0e7570888b0570dadd4d8e4bf9ad 120 SUPERFAMILY SSF89360 15 109 3.53E-23 T 20-04-2016 IPR000361 FeS cluster biogenesis AMC99_RS12135 211b0e7570888b0570dadd4d8e4bf9ad 120 Gene3D G3DSA:2.60.300.12 15 109 1.2E-25 T 20-04-2016 IPR000361 FeS cluster biogenesis AMC99_RS12135 211b0e7570888b0570dadd4d8e4bf9ad 120 Pfam PF01521 Iron-sulphur cluster biosynthesis 17 116 9.0E-19 T 20-04-2016 IPR000361 FeS cluster biogenesis AMC99_RS12135 211b0e7570888b0570dadd4d8e4bf9ad 120 PANTHER PTHR10072:SF41 9 120 4.4E-39 T 20-04-2016 AMC99_RS12135 211b0e7570888b0570dadd4d8e4bf9ad 120 PANTHER PTHR10072 9 120 4.4E-39 T 20-04-2016 AMC99_RS12135 211b0e7570888b0570dadd4d8e4bf9ad 120 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 101 118 - T 20-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site AMC99_RS11460 221dac4b037ce30044fd24a4f8f0d000 265 Gene3D G3DSA:3.60.10.10 3 264 6.9E-67 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMC99_RS11460 221dac4b037ce30044fd24a4f8f0d000 265 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 4 263 5.8E-51 T 20-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMC99_RS11460 221dac4b037ce30044fd24a4f8f0d000 265 PANTHER PTHR22748 4 265 1.9E-76 T 20-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMC99_RS11460 221dac4b037ce30044fd24a4f8f0d000 265 PANTHER PTHR22748:SF7 4 265 1.9E-76 T 20-04-2016 AMC99_RS11460 221dac4b037ce30044fd24a4f8f0d000 265 SUPERFAMILY SSF56219 3 265 9.81E-68 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMC99_RS11460 221dac4b037ce30044fd24a4f8f0d000 265 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 256 3.3E-27 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMC99_RS11460 221dac4b037ce30044fd24a4f8f0d000 265 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 20-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AMC99_RS02095 d8f8cac936c4849310171d2fb1328852 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 20-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMC99_RS02095 d8f8cac936c4849310171d2fb1328852 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 1.4E-63 T 20-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMC99_RS02095 d8f8cac936c4849310171d2fb1328852 197 SUPERFAMILY SSF54211 1 85 1.77E-32 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS02095 d8f8cac936c4849310171d2fb1328852 197 PANTHER PTHR23133 1 195 2.0E-103 T 20-04-2016 AMC99_RS02095 d8f8cac936c4849310171d2fb1328852 197 PANTHER PTHR23133:SF2 1 195 2.0E-103 T 20-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMC99_RS02095 d8f8cac936c4849310171d2fb1328852 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 41.472 T 20-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMC99_RS02095 d8f8cac936c4849310171d2fb1328852 197 Gene3D G3DSA:3.30.230.40 90 195 5.4E-32 T 20-04-2016 AMC99_RS02095 d8f8cac936c4849310171d2fb1328852 197 Gene3D G3DSA:3.30.230.40 1 88 5.9E-36 T 20-04-2016 AMC99_RS02095 d8f8cac936c4849310171d2fb1328852 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 20-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMC99_RS02095 d8f8cac936c4849310171d2fb1328852 197 SUPERFAMILY SSF54211 87 179 7.84E-35 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS11400 accbc911afd83b666dda042034e5c41b 601 Pfam PF16188 C-terminal region of peptidase_M24 542 601 3.5E-24 T 20-04-2016 IPR032416 Peptidase M24, C-terminal domain AMC99_RS11400 accbc911afd83b666dda042034e5c41b 601 SUPERFAMILY SSF53092 7 131 8.55E-10 T 20-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal AMC99_RS11400 accbc911afd83b666dda042034e5c41b 601 PANTHER PTHR10804:SF105 284 599 1.3E-207 T 20-04-2016 AMC99_RS11400 accbc911afd83b666dda042034e5c41b 601 PANTHER PTHR10804 284 599 1.3E-207 T 20-04-2016 AMC99_RS11400 accbc911afd83b666dda042034e5c41b 601 Pfam PF01321 Creatinase/Prolidase N-terminal domain 9 141 1.6E-17 T 20-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 AMC99_RS11400 accbc911afd83b666dda042034e5c41b 601 SUPERFAMILY SSF55920 305 567 7.72E-56 T 20-04-2016 IPR000994 Peptidase M24, structural domain AMC99_RS11400 accbc911afd83b666dda042034e5c41b 601 Pfam PF16189 Creatinase/Prolidase N-terminal domain 150 308 2.5E-37 T 20-04-2016 AMC99_RS11400 accbc911afd83b666dda042034e5c41b 601 Pfam PF00557 Metallopeptidase family M24 312 529 6.1E-45 T 20-04-2016 IPR000994 Peptidase M24, structural domain AMC99_RS11400 accbc911afd83b666dda042034e5c41b 601 Gene3D G3DSA:3.90.230.10 302 568 1.1E-57 T 20-04-2016 IPR000994 Peptidase M24, structural domain AMC99_RS11400 accbc911afd83b666dda042034e5c41b 601 Gene3D G3DSA:3.40.350.10 173 278 8.4E-5 T 20-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMC99_RS11400 accbc911afd83b666dda042034e5c41b 601 Gene3D G3DSA:3.40.350.10 3 139 8.2E-21 T 20-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMC99_RS11400 accbc911afd83b666dda042034e5c41b 601 PANTHER PTHR10804:SF105 8 182 1.3E-207 T 20-04-2016 AMC99_RS11400 accbc911afd83b666dda042034e5c41b 601 PANTHER PTHR10804 8 182 1.3E-207 T 20-04-2016 AMC99_RS09685 2b37313de9a064494d517c75cf270bdb 268 PANTHER PTHR24032:SF31 11 244 5.4E-31 T 20-04-2016 AMC99_RS09685 2b37313de9a064494d517c75cf270bdb 268 PANTHER PTHR24032 11 244 5.4E-31 T 20-04-2016 AMC99_RS09685 2b37313de9a064494d517c75cf270bdb 268 Pfam PF00149 Calcineurin-like phosphoesterase 27 213 1.0E-14 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMC99_RS09685 2b37313de9a064494d517c75cf270bdb 268 SUPERFAMILY SSF56300 23 251 9.97E-44 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like AMC99_RS09685 2b37313de9a064494d517c75cf270bdb 268 Gene3D G3DSA:3.60.21.10 16 251 3.2E-47 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like AMC99_RS09935 3ea8ee90f9f3854611eb03fc52326c02 330 PANTHER PTHR30514 4 330 8.9E-68 T 20-04-2016 AMC99_RS09935 3ea8ee90f9f3854611eb03fc52326c02 330 SUPERFAMILY SSF53067 9 327 2.11E-53 T 20-04-2016 AMC99_RS09935 3ea8ee90f9f3854611eb03fc52326c02 330 TIGRFAM TIGR00749 glk: glucokinase 11 320 1.0E-71 T 20-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMC99_RS09935 3ea8ee90f9f3854611eb03fc52326c02 330 Gene3D G3DSA:3.40.367.20 107 309 4.4E-61 T 20-04-2016 AMC99_RS09935 3ea8ee90f9f3854611eb03fc52326c02 330 Pfam PF02685 Glucokinase 11 324 1.5E-89 T 20-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMC99_RS09935 3ea8ee90f9f3854611eb03fc52326c02 330 PANTHER PTHR30514:SF0 4 330 8.9E-68 T 20-04-2016 AMC99_RS05130 35fdc86940565d76ed33ae21187f067f 231 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 64 198 1.6E-36 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMC99_RS05130 35fdc86940565d76ed33ae21187f067f 231 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 97 109 2.1E-7 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMC99_RS05130 35fdc86940565d76ed33ae21187f067f 231 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 2.1E-7 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMC99_RS05130 35fdc86940565d76ed33ae21187f067f 231 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 165 180 2.1E-7 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMC99_RS05130 35fdc86940565d76ed33ae21187f067f 231 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 71 86 2.1E-7 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMC99_RS05130 35fdc86940565d76ed33ae21187f067f 231 Gene3D G3DSA:2.40.100.10 50 204 1.9E-38 T 20-04-2016 IPR029000 Cyclophilin-like domain AMC99_RS05130 35fdc86940565d76ed33ae21187f067f 231 PANTHER PTHR11071:SF78 1 183 9.1E-34 T 20-04-2016 AMC99_RS05130 35fdc86940565d76ed33ae21187f067f 231 PANTHER PTHR11071 1 183 9.1E-34 T 20-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 AMC99_RS05130 35fdc86940565d76ed33ae21187f067f 231 SUPERFAMILY SSF50891 59 213 1.33E-41 T 20-04-2016 IPR029000 Cyclophilin-like domain AMC99_RS12070 12e83d43d2bf805587724550fb9edd1f 235 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 85 92 - T 20-04-2016 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 AMC99_RS12070 12e83d43d2bf805587724550fb9edd1f 235 SUPERFAMILY SSF55895 50 219 1.7E-30 T 20-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 AMC99_RS12070 12e83d43d2bf805587724550fb9edd1f 235 Gene3D G3DSA:3.90.730.10 47 223 9.3E-26 T 20-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 AMC99_RS12070 12e83d43d2bf805587724550fb9edd1f 235 Pfam PF00445 Ribonuclease T2 family 54 156 9.6E-9 T 20-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 AMC99_RS12070 12e83d43d2bf805587724550fb9edd1f 235 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 125 136 - T 20-04-2016 IPR033130 Ribonuclease T2, His active site 2 AMC99_RS06845 034ab7d14655fbe6b1648fc0aa9956e8 254 Gene3D G3DSA:3.40.50.1820 5 252 4.0E-34 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS06845 034ab7d14655fbe6b1648fc0aa9956e8 254 Pfam PF00561 alpha/beta hydrolase fold 27 125 9.6E-13 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS06845 034ab7d14655fbe6b1648fc0aa9956e8 254 SUPERFAMILY SSF53474 188 252 5.22E-35 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS06845 034ab7d14655fbe6b1648fc0aa9956e8 254 SUPERFAMILY SSF53474 5 134 5.22E-35 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS06845 034ab7d14655fbe6b1648fc0aa9956e8 254 PANTHER PTHR10992 3 252 2.7E-23 T 20-04-2016 AMC99_RS06845 034ab7d14655fbe6b1648fc0aa9956e8 254 PANTHER PTHR10992:SF771 3 252 2.7E-23 T 20-04-2016 AMC99_RS12605 98b66e88c0f22af46c6df6bb7ee1a2a6 561 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 545 4.5E-15 T 20-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMC99_RS12605 98b66e88c0f22af46c6df6bb7ee1a2a6 561 PANTHER PTHR24096 19 151 1.3E-161 T 20-04-2016 AMC99_RS12605 98b66e88c0f22af46c6df6bb7ee1a2a6 561 PANTHER PTHR24096 179 554 1.3E-161 T 20-04-2016 AMC99_RS12605 98b66e88c0f22af46c6df6bb7ee1a2a6 561 SUPERFAMILY SSF56801 12 558 4.71E-152 T 20-04-2016 AMC99_RS12605 98b66e88c0f22af46c6df6bb7ee1a2a6 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 208 219 - T 20-04-2016 IPR020845 AMP-binding, conserved site AMC99_RS12605 98b66e88c0f22af46c6df6bb7ee1a2a6 561 Gene3D G3DSA:3.40.50.980 182 213 5.5E-35 T 20-04-2016 AMC99_RS12605 98b66e88c0f22af46c6df6bb7ee1a2a6 561 Gene3D G3DSA:3.40.50.980 22 150 5.5E-35 T 20-04-2016 AMC99_RS12605 98b66e88c0f22af46c6df6bb7ee1a2a6 561 Gene3D G3DSA:3.40.50.980 214 375 7.9E-48 T 20-04-2016 AMC99_RS12605 98b66e88c0f22af46c6df6bb7ee1a2a6 561 Gene3D G3DSA:3.30.300.30 456 554 4.4E-26 T 20-04-2016 AMC99_RS12605 98b66e88c0f22af46c6df6bb7ee1a2a6 561 Pfam PF00501 AMP-binding enzyme 32 461 1.1E-104 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMC99_RS12605 98b66e88c0f22af46c6df6bb7ee1a2a6 561 Gene3D G3DSA:2.30.38.10 376 452 6.0E-25 T 20-04-2016 AMC99_RS00855 cdb3d18a1f6db15cca1c988ba7539fc8 255 Pfam PF13712 Glycosyltransferase like family 8 171 4.0E-9 T 20-04-2016 AMC99_RS00855 cdb3d18a1f6db15cca1c988ba7539fc8 255 SUPERFAMILY SSF53448 42 204 1.1E-8 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS00855 cdb3d18a1f6db15cca1c988ba7539fc8 255 Gene3D G3DSA:3.90.550.10 45 152 1.9E-6 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS01890 96065b3e2c65a875889979bbed2349ec 372 SUPERFAMILY SSF51412 115 364 1.98E-47 T 20-04-2016 AMC99_RS01890 96065b3e2c65a875889979bbed2349ec 372 SUPERFAMILY SSF51412 5 70 1.98E-47 T 20-04-2016 AMC99_RS01890 96065b3e2c65a875889979bbed2349ec 372 Gene3D G3DSA:3.20.20.70 3 354 1.4E-50 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS01890 96065b3e2c65a875889979bbed2349ec 372 Pfam PF03060 Nitronate monooxygenase 22 356 1.4E-44 T 20-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMC99_RS01890 96065b3e2c65a875889979bbed2349ec 372 PANTHER PTHR10982 1 83 5.1E-136 T 20-04-2016 AMC99_RS01890 96065b3e2c65a875889979bbed2349ec 372 PANTHER PTHR10982 124 367 5.1E-136 T 20-04-2016 AMC99_RS01890 96065b3e2c65a875889979bbed2349ec 372 PANTHER PTHR10982:SF10 1 83 5.1E-136 T 20-04-2016 AMC99_RS01890 96065b3e2c65a875889979bbed2349ec 372 PANTHER PTHR10982:SF10 124 367 5.1E-136 T 20-04-2016 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 PANTHER PTHR11361 1 807 5.5E-304 T 20-04-2016 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 SMART SM00533 279 592 3.2E-62 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 Gene3D G3DSA:3.30.420.110 130 248 2.4E-19 T 20-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 Pfam PF05188 MutS domain II 131 240 3.0E-10 T 20-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 SUPERFAMILY SSF48334 263 565 5.36E-68 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 692 708 - T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 859 3.1E-241 T 20-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 Pfam PF00488 MutS domain V 614 801 4.4E-80 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 Pfam PF05192 MutS domain III 265 559 2.7E-29 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 Gene3D G3DSA:1.10.1420.10 260 466 5.2E-41 T 20-04-2016 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 PANTHER PTHR11361:SF86 1 807 5.5E-304 T 20-04-2016 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 SUPERFAMILY SSF55271 1 118 2.09E-33 T 20-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 Gene3D G3DSA:3.40.1170.10 1 123 6.6E-43 T 20-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 854 21.581 T 20-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 Gene3D G3DSA:3.40.50.300 568 802 7.9E-82 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 SUPERFAMILY SSF53150 120 273 1.96E-28 T 20-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 Pfam PF05190 MutS family domain IV 427 517 1.6E-18 T 20-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 SMART SM00534 611 798 9.0E-105 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 SUPERFAMILY SSF52540 568 802 3.3E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS13470 4ee09466e118022ddab81fe31119b225 867 Pfam PF01624 MutS domain I 1 122 1.5E-35 T 20-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 AMC99_RS11550 7a4184640280765b4ceedc710c59620d 594 SUPERFAMILY SSF52540 342 588 7.28E-91 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11550 7a4184640280765b4ceedc710c59620d 594 SUPERFAMILY SSF90123 20 332 7.06E-70 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMC99_RS11550 7a4184640280765b4ceedc710c59620d 594 Pfam PF00005 ABC transporter 368 517 2.5E-33 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS11550 7a4184640280765b4ceedc710c59620d 594 SMART SM00382 377 563 4.0E-20 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS11550 7a4184640280765b4ceedc710c59620d 594 Gene3D G3DSA:3.40.50.300 350 581 2.1E-86 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11550 7a4184640280765b4ceedc710c59620d 594 Gene3D G3DSA:1.20.1560.10 22 336 1.7E-70 T 20-04-2016 AMC99_RS11550 7a4184640280765b4ceedc710c59620d 594 PANTHER PTHR24221 3 594 2.5E-232 T 20-04-2016 AMC99_RS11550 7a4184640280765b4ceedc710c59620d 594 Pfam PF00664 ABC transporter transmembrane region 35 293 2.1E-48 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMC99_RS11550 7a4184640280765b4ceedc710c59620d 594 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_RS05340 205d52b5cf58cd83ef1b94be26817050 609 PANTHER PTHR10073 4 606 4.0E-147 T 20-04-2016 AMC99_RS05340 205d52b5cf58cd83ef1b94be26817050 609 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 606 26.321 T 20-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AMC99_RS05340 205d52b5cf58cd83ef1b94be26817050 609 SUPERFAMILY SSF118116 417 608 8.11E-58 T 20-04-2016 AMC99_RS05340 205d52b5cf58cd83ef1b94be26817050 609 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 310 9.1E-84 T 20-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 AMC99_RS05340 205d52b5cf58cd83ef1b94be26817050 609 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 125 2.1E-11 T 20-04-2016 AMC99_RS05340 205d52b5cf58cd83ef1b94be26817050 609 SMART SM01340 208 330 9.3E-49 T 20-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AMC99_RS05340 205d52b5cf58cd83ef1b94be26817050 609 Pfam PF08676 MutL C terminal dimerisation domain 418 566 1.0E-44 T 20-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AMC99_RS05340 205d52b5cf58cd83ef1b94be26817050 609 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 20-04-2016 IPR014762 DNA mismatch repair, conserved site AMC99_RS05340 205d52b5cf58cd83ef1b94be26817050 609 Gene3D G3DSA:3.30.230.10 215 329 3.8E-31 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_RS05340 205d52b5cf58cd83ef1b94be26817050 609 Gene3D G3DSA:3.30.565.10 3 212 1.1E-72 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS05340 205d52b5cf58cd83ef1b94be26817050 609 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 329 6.8E-31 T 20-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AMC99_RS05340 205d52b5cf58cd83ef1b94be26817050 609 SUPERFAMILY SSF54211 190 330 5.31E-32 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS05340 205d52b5cf58cd83ef1b94be26817050 609 SMART SM00853 422 566 8.6E-52 T 20-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AMC99_RS05340 205d52b5cf58cd83ef1b94be26817050 609 SUPERFAMILY SSF55874 2 209 1.57E-50 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS09125 aa7246a302b82c83449da973bc31fd7d 356 Pfam PF00953 Glycosyl transferase family 4 99 280 1.3E-32 T 20-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS09125 aa7246a302b82c83449da973bc31fd7d 356 ProSitePatterns PS01348 MraY family signature 2. 185 196 - T 20-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS09125 aa7246a302b82c83449da973bc31fd7d 356 PANTHER PTHR22926:SF5 2 356 3.4E-149 T 20-04-2016 AMC99_RS09125 aa7246a302b82c83449da973bc31fd7d 356 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.3E-5 T 20-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS09125 aa7246a302b82c83449da973bc31fd7d 356 PANTHER PTHR22926 2 356 3.4E-149 T 20-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS09125 aa7246a302b82c83449da973bc31fd7d 356 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 20-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS09125 aa7246a302b82c83449da973bc31fd7d 356 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 356 1.1E-123 T 20-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS09125 aa7246a302b82c83449da973bc31fd7d 356 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 24 354 24.509 T 20-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS04950 3bd6020a5ffaa5e79a4552adc7975b27 447 SUPERFAMILY SSF103473 21 429 1.7E-38 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS04950 3bd6020a5ffaa5e79a4552adc7975b27 447 Gene3D G3DSA:1.20.1250.20 253 433 1.0E-11 T 20-04-2016 AMC99_RS04950 3bd6020a5ffaa5e79a4552adc7975b27 447 Gene3D G3DSA:1.20.1250.20 21 209 1.7E-18 T 20-04-2016 AMC99_RS04950 3bd6020a5ffaa5e79a4552adc7975b27 447 Pfam PF07690 Major Facilitator Superfamily 24 391 4.0E-26 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS04950 3bd6020a5ffaa5e79a4552adc7975b27 447 PANTHER PTHR12778 20 426 3.4E-16 T 20-04-2016 AMC99_RS12845 79c211ce19bb42593412034a5a1bd8d8 397 Gene3D G3DSA:2.40.50.100 203 230 2.6E-11 T 20-04-2016 AMC99_RS12845 79c211ce19bb42593412034a5a1bd8d8 397 Gene3D G3DSA:2.40.50.100 103 128 2.6E-11 T 20-04-2016 AMC99_RS12845 79c211ce19bb42593412034a5a1bd8d8 397 Gene3D G3DSA:1.20.1600.10 137 200 8.6E-5 T 20-04-2016 AMC99_RS12845 79c211ce19bb42593412034a5a1bd8d8 397 PANTHER PTHR30469:SF15 22 387 1.4E-60 T 20-04-2016 AMC99_RS12845 79c211ce19bb42593412034a5a1bd8d8 397 PANTHER PTHR30469 22 387 1.4E-60 T 20-04-2016 AMC99_RS12845 79c211ce19bb42593412034a5a1bd8d8 397 SUPERFAMILY SSF111369 103 315 8.11E-18 T 20-04-2016 AMC99_RS12845 79c211ce19bb42593412034a5a1bd8d8 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 69 387 3.7E-56 T 20-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMC99_RS12845 79c211ce19bb42593412034a5a1bd8d8 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 82 308 3.6E-18 T 20-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMC99_RS02350 ae59dec2ba9b2c5fdf90133c34366889 356 SUPERFAMILY SSF47203 210 352 4.35E-34 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS02350 ae59dec2ba9b2c5fdf90133c34366889 356 SUPERFAMILY SSF56645 3 199 1.83E-31 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS02350 ae59dec2ba9b2c5fdf90133c34366889 356 Gene3D G3DSA:1.20.140.10 214 352 5.0E-31 T 20-04-2016 AMC99_RS02350 ae59dec2ba9b2c5fdf90133c34366889 356 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 118 1.6E-26 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS02350 ae59dec2ba9b2c5fdf90133c34366889 356 PANTHER PTHR10909 4 351 1.0E-59 T 20-04-2016 AMC99_RS02350 ae59dec2ba9b2c5fdf90133c34366889 356 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 214 351 8.0E-24 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS02350 ae59dec2ba9b2c5fdf90133c34366889 356 Gene3D G3DSA:1.10.540.10 4 120 5.3E-26 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS02350 ae59dec2ba9b2c5fdf90133c34366889 356 PANTHER PTHR10909:SF302 4 351 1.0E-59 T 20-04-2016 AMC99_RS07780 fef55c4d0374945938dbf2b2eb34fa2a 688 Gene3D G3DSA:3.60.110.10 18 299 5.7E-49 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMC99_RS07780 fef55c4d0374945938dbf2b2eb34fa2a 688 PANTHER PTHR23090 16 604 5.0E-167 T 20-04-2016 AMC99_RS07780 fef55c4d0374945938dbf2b2eb34fa2a 688 PANTHER PTHR23090 621 677 5.0E-167 T 20-04-2016 AMC99_RS07780 fef55c4d0374945938dbf2b2eb34fa2a 688 SUPERFAMILY SSF52402 624 655 1.93E-62 T 20-04-2016 AMC99_RS07780 fef55c4d0374945938dbf2b2eb34fa2a 688 SUPERFAMILY SSF52402 332 583 1.93E-62 T 20-04-2016 AMC99_RS07780 fef55c4d0374945938dbf2b2eb34fa2a 688 SUPERFAMILY SSF56317 18 299 2.35E-48 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMC99_RS07780 fef55c4d0374945938dbf2b2eb34fa2a 688 Gene3D G3DSA:3.40.50.620 627 655 6.0E-59 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS07780 fef55c4d0374945938dbf2b2eb34fa2a 688 Gene3D G3DSA:3.40.50.620 334 586 6.0E-59 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS07780 fef55c4d0374945938dbf2b2eb34fa2a 688 Pfam PF00795 Carbon-nitrogen hydrolase 20 287 3.9E-13 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMC99_RS07780 fef55c4d0374945938dbf2b2eb34fa2a 688 PIRSF PIRSF006630 16 677 8.7E-152 T 20-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 AMC99_RS07780 fef55c4d0374945938dbf2b2eb34fa2a 688 Pfam PF02540 NAD synthase 355 527 3.0E-21 T 20-04-2016 IPR022310 NAD/GMP synthase AMC99_RS07780 fef55c4d0374945938dbf2b2eb34fa2a 688 PANTHER PTHR23090:SF9 16 604 5.0E-167 T 20-04-2016 AMC99_RS07780 fef55c4d0374945938dbf2b2eb34fa2a 688 PANTHER PTHR23090:SF9 621 677 5.0E-167 T 20-04-2016 AMC99_RS09815 f7cbe8e06c0ff213c7463b31b023dd50 339 Pfam PF08238 Sel1 repeat 48 83 5.4E-8 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS09815 f7cbe8e06c0ff213c7463b31b023dd50 339 Pfam PF08238 Sel1 repeat 116 146 26.0 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS09815 f7cbe8e06c0ff213c7463b31b023dd50 339 Gene3D G3DSA:3.30.70.1070 263 338 8.7E-9 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMC99_RS09815 f7cbe8e06c0ff213c7463b31b023dd50 339 SUPERFAMILY SSF110997 263 337 1.16E-10 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMC99_RS09815 f7cbe8e06c0ff213c7463b31b023dd50 339 Gene3D G3DSA:1.25.40.10 28 161 2.0E-23 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS09815 f7cbe8e06c0ff213c7463b31b023dd50 339 PANTHER PTHR11102 43 173 1.4E-18 T 20-04-2016 AMC99_RS09815 f7cbe8e06c0ff213c7463b31b023dd50 339 SUPERFAMILY SSF81901 23 173 7.72E-23 T 20-04-2016 AMC99_RS09815 f7cbe8e06c0ff213c7463b31b023dd50 339 SMART SM00671 116 151 10.0 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS09815 f7cbe8e06c0ff213c7463b31b023dd50 339 SMART SM00671 48 83 2.0E-9 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS09815 f7cbe8e06c0ff213c7463b31b023dd50 339 Pfam PF05036 Sporulation related domain 264 337 7.8E-14 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMC99_RS10870 f19c79ad23014c76a6711ee5b87af8b7 479 Gene3D G3DSA:3.30.70.360 325 372 4.5E-20 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS10870 f19c79ad23014c76a6711ee5b87af8b7 479 Gene3D G3DSA:3.30.70.360 242 280 4.5E-20 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS10870 f19c79ad23014c76a6711ee5b87af8b7 479 PANTHER PTHR11014 28 477 3.1E-59 T 20-04-2016 AMC99_RS10870 f19c79ad23014c76a6711ee5b87af8b7 479 SUPERFAMILY SSF53187 33 231 3.01E-48 T 20-04-2016 AMC99_RS10870 f19c79ad23014c76a6711ee5b87af8b7 479 SUPERFAMILY SSF53187 388 477 3.01E-48 T 20-04-2016 AMC99_RS10870 f19c79ad23014c76a6711ee5b87af8b7 479 Pfam PF07687 Peptidase dimerisation domain 229 371 3.1E-16 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS10870 f19c79ad23014c76a6711ee5b87af8b7 479 Gene3D G3DSA:3.40.630.10 36 241 1.0E-49 T 20-04-2016 AMC99_RS10870 f19c79ad23014c76a6711ee5b87af8b7 479 Gene3D G3DSA:3.40.630.10 414 478 1.0E-49 T 20-04-2016 AMC99_RS10870 f19c79ad23014c76a6711ee5b87af8b7 479 SUPERFAMILY SSF55031 326 371 1.26E-9 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS10870 f19c79ad23014c76a6711ee5b87af8b7 479 SUPERFAMILY SSF55031 235 280 1.26E-9 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS10870 f19c79ad23014c76a6711ee5b87af8b7 479 Pfam PF01546 Peptidase family M20/M25/M40 114 474 6.8E-26 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMC99_RS03370 0092e0ffef897a1f6c5434c373ca3484 369 PANTHER PTHR22939 136 367 1.6E-57 T 20-04-2016 AMC99_RS03370 0092e0ffef897a1f6c5434c373ca3484 369 SUPERFAMILY SSF50156 105 204 3.42E-13 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS03370 0092e0ffef897a1f6c5434c373ca3484 369 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 136 364 1.1E-49 T 20-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AMC99_RS03370 0092e0ffef897a1f6c5434c373ca3484 369 Pfam PF02163 Peptidase family M50 6 352 6.7E-74 T 20-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 AMC99_RS03370 0092e0ffef897a1f6c5434c373ca3484 369 PANTHER PTHR22939:SF78 136 367 1.6E-57 T 20-04-2016 AMC99_RS03370 0092e0ffef897a1f6c5434c373ca3484 369 Gene3D G3DSA:2.30.42.10 100 206 1.0E-18 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS03370 0092e0ffef897a1f6c5434c373ca3484 369 Pfam PF13180 PDZ domain 139 204 2.4E-7 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 Gene3D G3DSA:1.10.287.130 287 348 2.3E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 Pfam PF00672 HAMP domain 222 293 3.1E-14 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 Pfam PF00512 His Kinase A (phospho-acceptor) domain 300 361 2.1E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 Pfam PF13755 Sensor N-terminal transmembrane domain 24 77 4.7E-9 T 20-04-2016 IPR025908 Sensor N-terminal transmembrane domain AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 SUPERFAMILY SSF47384 280 361 4.32E-15 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 2.9E-9 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 2.9E-9 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 2.9E-9 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 410 520 9.8E-19 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 SMART SM00304 241 296 1.4E-5 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 PANTHER PTHR24423 235 522 3.3E-57 T 20-04-2016 AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 PANTHER PTHR24423 8 19 3.3E-57 T 20-04-2016 AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 PANTHER PTHR24423 128 175 3.3E-57 T 20-04-2016 AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 SMART SM00388 297 362 6.8E-14 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 SUPERFAMILY SSF158472 241 295 6.8E-6 T 20-04-2016 AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 Gene3D G3DSA:3.30.565.10 349 520 1.5E-35 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 SMART SM00387 408 522 6.0E-31 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS08670 20d21ec57b8b3d5d2af78ac88585793a 522 SUPERFAMILY SSF55874 352 520 6.94E-37 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS03645 53f3bdf887b26f7617ef8a88b84df8f3 261 SUPERFAMILY SSF52096 1 255 2.67E-60 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS03645 53f3bdf887b26f7617ef8a88b84df8f3 261 PANTHER PTHR11941 1 247 6.9E-57 T 20-04-2016 AMC99_RS03645 53f3bdf887b26f7617ef8a88b84df8f3 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 20-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AMC99_RS03645 53f3bdf887b26f7617ef8a88b84df8f3 261 Gene3D G3DSA:3.90.226.10 2 248 8.9E-63 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS03645 53f3bdf887b26f7617ef8a88b84df8f3 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 248 2.3E-41 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMC99_RS02340 580488b9d7706b5f8351989484d6ee9c 413 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 252 275 1.0E-5 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS02340 580488b9d7706b5f8351989484d6ee9c 413 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 231 244 1.0E-5 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS02340 580488b9d7706b5f8351989484d6ee9c 413 Gene3D G3DSA:1.10.357.10 8 200 8.4E-26 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMC99_RS02340 580488b9d7706b5f8351989484d6ee9c 413 Gene3D G3DSA:1.10.357.10 278 412 4.9E-15 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMC99_RS02340 580488b9d7706b5f8351989484d6ee9c 413 Pfam PF00440 Bacterial regulatory proteins, tetR family 232 277 5.7E-12 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS02340 580488b9d7706b5f8351989484d6ee9c 413 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 6.6E-10 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS02340 580488b9d7706b5f8351989484d6ee9c 413 SUPERFAMILY SSF46689 14 90 1.13E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS02340 580488b9d7706b5f8351989484d6ee9c 413 SUPERFAMILY SSF48498 326 409 1.51E-7 T 20-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMC99_RS02340 580488b9d7706b5f8351989484d6ee9c 413 SUPERFAMILY SSF46689 229 291 4.61E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS02340 580488b9d7706b5f8351989484d6ee9c 413 Gene3D G3DSA:1.10.10.60 228 277 9.8E-16 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS02340 580488b9d7706b5f8351989484d6ee9c 413 PANTHER PTHR30055 3 237 6.4E-21 T 20-04-2016 AMC99_RS08135 d3b29d3a3c4667cb3b9dd31a03a76a99 85 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 3 82 1.6E-25 T 20-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMC99_RS08135 d3b29d3a3c4667cb3b9dd31a03a76a99 85 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 83 9.3E-23 T 20-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMC99_RS08135 d3b29d3a3c4667cb3b9dd31a03a76a99 85 SUPERFAMILY SSF51344 1 84 3.4E-22 T 20-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMC99_RS08135 d3b29d3a3c4667cb3b9dd31a03a76a99 85 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 8 81 4.0E-28 T 20-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMC99_RS08135 d3b29d3a3c4667cb3b9dd31a03a76a99 85 Gene3D G3DSA:2.60.15.10 1 84 2.5E-26 T 20-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMC99_RS08135 d3b29d3a3c4667cb3b9dd31a03a76a99 85 PANTHER PTHR13822 1 84 3.5E-19 T 20-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMC99_RS08135 d3b29d3a3c4667cb3b9dd31a03a76a99 85 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 1 85 11.041 T 20-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMC99_RS09380 4395b7b0ee6842a9b263ad64375eafcd 365 PANTHER PTHR13847 5 364 4.3E-33 T 20-04-2016 AMC99_RS09380 4395b7b0ee6842a9b263ad64375eafcd 365 SUPERFAMILY SSF51905 5 210 2.14E-35 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS09380 4395b7b0ee6842a9b263ad64375eafcd 365 SUPERFAMILY SSF51905 302 359 2.14E-35 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS09380 4395b7b0ee6842a9b263ad64375eafcd 365 Gene3D G3DSA:3.50.50.60 96 209 2.3E-28 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS09380 4395b7b0ee6842a9b263ad64375eafcd 365 Gene3D G3DSA:3.50.50.60 3 58 2.3E-28 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS09380 4395b7b0ee6842a9b263ad64375eafcd 365 Gene3D G3DSA:3.50.50.60 302 349 2.3E-28 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS09380 4395b7b0ee6842a9b263ad64375eafcd 365 Pfam PF01266 FAD dependent oxidoreductase 6 337 1.7E-41 T 20-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMC99_RS13640 9297b133571b9e2ad08508c6ec549ed6 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.006 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_RS13640 9297b133571b9e2ad08508c6ec549ed6 95 Gene3D G3DSA:2.30.33.40 2 94 1.8E-38 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_RS13640 9297b133571b9e2ad08508c6ec549ed6 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 4.1E-35 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_RS13640 9297b133571b9e2ad08508c6ec549ed6 95 PANTHER PTHR10772 1 94 3.8E-47 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_RS13640 9297b133571b9e2ad08508c6ec549ed6 95 PRINTS PR00297 10kDa chaperonin signature 81 94 2.2E-33 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_RS13640 9297b133571b9e2ad08508c6ec549ed6 95 PRINTS PR00297 10kDa chaperonin signature 60 72 2.2E-33 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_RS13640 9297b133571b9e2ad08508c6ec549ed6 95 PRINTS PR00297 10kDa chaperonin signature 25 46 2.2E-33 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_RS13640 9297b133571b9e2ad08508c6ec549ed6 95 PRINTS PR00297 10kDa chaperonin signature 3 18 2.2E-33 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_RS13640 9297b133571b9e2ad08508c6ec549ed6 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 20-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AMC99_RS13640 9297b133571b9e2ad08508c6ec549ed6 95 SMART SM00883 2 94 2.9E-60 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_RS13640 9297b133571b9e2ad08508c6ec549ed6 95 SUPERFAMILY SSF50129 1 94 1.88E-35 T 20-04-2016 IPR011032 GroES-like AMC99_RS03300 572137ce75f4144fc1c8b38462fbd2d6 264 Gene3D G3DSA:3.30.1330.30 28 100 7.1E-9 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like AMC99_RS03300 572137ce75f4144fc1c8b38462fbd2d6 264 PANTHER PTHR12029:SF58 28 263 2.6E-54 T 20-04-2016 AMC99_RS03300 572137ce75f4144fc1c8b38462fbd2d6 264 PANTHER PTHR12029 28 263 2.6E-54 T 20-04-2016 AMC99_RS03300 572137ce75f4144fc1c8b38462fbd2d6 264 SUPERFAMILY SSF55315 27 101 8.95E-11 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like AMC99_RS03300 572137ce75f4144fc1c8b38462fbd2d6 264 SMART SM00967 32 104 1.2E-12 T 20-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AMC99_RS03300 572137ce75f4144fc1c8b38462fbd2d6 264 Gene3D G3DSA:3.40.1280.10 116 260 1.7E-43 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMC99_RS03300 572137ce75f4144fc1c8b38462fbd2d6 264 Pfam PF00588 SpoU rRNA Methylase family 118 257 6.0E-36 T 20-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMC99_RS03300 572137ce75f4144fc1c8b38462fbd2d6 264 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 33 103 8.9E-11 T 20-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AMC99_RS03300 572137ce75f4144fc1c8b38462fbd2d6 264 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 32 261 1.5E-50 T 20-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 AMC99_RS03300 572137ce75f4144fc1c8b38462fbd2d6 264 SUPERFAMILY SSF75217 92 260 7.19E-41 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases AMC99_RS05585 06430de3d046979eff596c06ef830006 237 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 46.878 T 20-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 AMC99_RS05585 06430de3d046979eff596c06ef830006 237 PANTHER PTHR11953:SF0 1 237 1.8E-75 T 20-04-2016 AMC99_RS05585 06430de3d046979eff596c06ef830006 237 Pfam PF01138 3' exoribonuclease family, domain 1 10 139 1.5E-23 T 20-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AMC99_RS05585 06430de3d046979eff596c06ef830006 237 Gene3D G3DSA:3.30.230.70 8 236 1.4E-28 T 20-04-2016 IPR027408 PNPase/RNase PH domain AMC99_RS05585 06430de3d046979eff596c06ef830006 237 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 20-04-2016 IPR018336 Ribonuclease PH, conserved site AMC99_RS05585 06430de3d046979eff596c06ef830006 237 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.2E-109 T 20-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 AMC99_RS05585 06430de3d046979eff596c06ef830006 237 SUPERFAMILY SSF55666 153 236 5.63E-21 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMC99_RS05585 06430de3d046979eff596c06ef830006 237 SUPERFAMILY SSF54211 1 181 8.1E-47 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS05585 06430de3d046979eff596c06ef830006 237 Pfam PF03725 3' exoribonuclease family, domain 2 159 222 1.5E-7 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMC99_RS05585 06430de3d046979eff596c06ef830006 237 PANTHER PTHR11953 1 237 1.8E-75 T 20-04-2016 AMC99_RS09270 bf717674f62c07e71174b6b3a5eb630a 206 PANTHER PTHR38107 56 206 1.3E-26 T 20-04-2016 AMC99_RS09270 bf717674f62c07e71174b6b3a5eb630a 206 Pfam PF00959 Phage lysozyme 93 197 6.9E-18 T 20-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AMC99_RS09270 bf717674f62c07e71174b6b3a5eb630a 206 SUPERFAMILY SSF53955 54 204 4.55E-40 T 20-04-2016 IPR023346 Lysozyme-like domain AMC99_RS09270 bf717674f62c07e71174b6b3a5eb630a 206 PANTHER PTHR38107:SF2 56 206 1.3E-26 T 20-04-2016 AMC99_RS09270 bf717674f62c07e71174b6b3a5eb630a 206 Gene3D G3DSA:1.10.530.40 57 204 3.3E-39 T 20-04-2016 IPR023347 Lysozyme domain GO:0003796 AMC99_RS06950 001f1f8e7f33945d90028bcaefe340f4 207 PIRSF PIRSF020606 6 205 7.6E-67 T 20-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 AMC99_RS06950 001f1f8e7f33945d90028bcaefe340f4 207 Pfam PF09997 Predicted membrane protein (DUF2238) 43 182 1.9E-51 T 20-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 AMC99_RS08090 866df5858a904092bcc87d9dde77949b 210 Gene3D G3DSA:3.40.30.10 2 85 1.9E-17 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS08090 866df5858a904092bcc87d9dde77949b 210 SUPERFAMILY SSF47616 87 207 3.34E-22 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS08090 866df5858a904092bcc87d9dde77949b 210 Pfam PF13417 Glutathione S-transferase, N-terminal domain 12 80 1.8E-10 T 20-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_RS08090 866df5858a904092bcc87d9dde77949b 210 PANTHER PTHR11260:SF282 1 203 1.2E-58 T 20-04-2016 AMC99_RS08090 866df5858a904092bcc87d9dde77949b 210 Gene3D G3DSA:1.20.1050.10 86 205 6.7E-20 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS08090 866df5858a904092bcc87d9dde77949b 210 PANTHER PTHR11260 1 203 1.2E-58 T 20-04-2016 AMC99_RS08090 866df5858a904092bcc87d9dde77949b 210 Pfam PF00043 Glutathione S-transferase, C-terminal domain 106 192 4.6E-7 T 20-04-2016 IPR004046 Glutathione S-transferase, C-terminal AMC99_RS08090 866df5858a904092bcc87d9dde77949b 210 SUPERFAMILY SSF52833 1 84 7.04E-19 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS08115 ad2b17d7523f6559c194b43a9f63429c 184 PRINTS PR00125 ATP synthase delta subunit signature 142 157 1.4E-27 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMC99_RS08115 ad2b17d7523f6559c194b43a9f63429c 184 PRINTS PR00125 ATP synthase delta subunit signature 11 30 1.4E-27 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMC99_RS08115 ad2b17d7523f6559c194b43a9f63429c 184 PRINTS PR00125 ATP synthase delta subunit signature 157 175 1.4E-27 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMC99_RS08115 ad2b17d7523f6559c194b43a9f63429c 184 PRINTS PR00125 ATP synthase delta subunit signature 81 92 1.4E-27 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMC99_RS08115 ad2b17d7523f6559c194b43a9f63429c 184 PRINTS PR00125 ATP synthase delta subunit signature 92 106 1.4E-27 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMC99_RS08115 ad2b17d7523f6559c194b43a9f63429c 184 SUPERFAMILY SSF47928 10 112 9.02E-24 T 20-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain AMC99_RS08115 ad2b17d7523f6559c194b43a9f63429c 184 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 12 181 1.1E-39 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMC99_RS08115 ad2b17d7523f6559c194b43a9f63429c 184 PANTHER PTHR11910:SF1 11 183 4.8E-56 T 20-04-2016 AMC99_RS08115 ad2b17d7523f6559c194b43a9f63429c 184 Hamap MF_01416 ATP synthase subunit delta [atpD]. 7 184 19.81 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMC99_RS08115 ad2b17d7523f6559c194b43a9f63429c 184 Pfam PF00213 ATP synthase delta (OSCP) subunit 11 182 4.1E-52 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMC99_RS08115 ad2b17d7523f6559c194b43a9f63429c 184 Gene3D G3DSA:1.10.520.20 10 113 6.7E-26 T 20-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain AMC99_RS08115 ad2b17d7523f6559c194b43a9f63429c 184 PANTHER PTHR11910 11 183 4.8E-56 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMC99_RS00135 7da96e9fde9a577276272d6d1ed98f24 192 Pfam PF01464 Transglycosylase SLT domain 73 176 2.1E-28 T 20-04-2016 IPR008258 Transglycosylase SLT domain 1 AMC99_RS00135 7da96e9fde9a577276272d6d1ed98f24 192 SUPERFAMILY SSF53955 59 189 1.27E-43 T 20-04-2016 IPR023346 Lysozyme-like domain AMC99_RS00135 7da96e9fde9a577276272d6d1ed98f24 192 PANTHER PTHR21666 53 189 1.6E-35 T 20-04-2016 AMC99_RS00135 7da96e9fde9a577276272d6d1ed98f24 192 Gene3D G3DSA:1.10.530.10 69 189 2.3E-42 T 20-04-2016 AMC99_RS04250 7e8d822a90d72953bd56222b0392fad4 234 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 20-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMC99_RS04250 7e8d822a90d72953bd56222b0392fad4 234 Gene3D G3DSA:2.160.10.10 65 184 3.2E-32 T 20-04-2016 AMC99_RS04250 7e8d822a90d72953bd56222b0392fad4 234 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 1.3E-8 T 20-04-2016 IPR001451 Hexapeptide repeat AMC99_RS04250 7e8d822a90d72953bd56222b0392fad4 234 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 70 106 6.0E-7 T 20-04-2016 IPR001451 Hexapeptide repeat AMC99_RS04250 7e8d822a90d72953bd56222b0392fad4 234 PANTHER PTHR23416 1 167 1.5E-72 T 20-04-2016 AMC99_RS04250 7e8d822a90d72953bd56222b0392fad4 234 SUPERFAMILY SSF51161 5 167 3.19E-45 T 20-04-2016 IPR011004 Trimeric LpxA-like AMC99_RS04250 7e8d822a90d72953bd56222b0392fad4 234 Gene3D G3DSA:1.10.3130.10 6 64 2.7E-17 T 20-04-2016 AMC99_RS04250 7e8d822a90d72953bd56222b0392fad4 234 PIRSF PIRSF000441 1 225 4.8E-73 T 20-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 AMC99_RS04250 7e8d822a90d72953bd56222b0392fad4 234 PANTHER PTHR23416:SF55 1 167 1.5E-72 T 20-04-2016 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 SUPERFAMILY SSF47384 427 498 1.12E-10 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 SMART SM00448 697 808 1.6E-25 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 Gene3D G3DSA:3.30.450.20 309 415 4.7E-4 T 20-04-2016 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 PANTHER PTHR24423 1 15 2.8E-115 T 20-04-2016 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 PANTHER PTHR24423 418 812 2.8E-115 T 20-04-2016 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 PANTHER PTHR24423 137 176 2.8E-115 T 20-04-2016 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 Gene3D G3DSA:3.40.50.2300 697 816 1.7E-35 T 20-04-2016 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 625 4.1E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 646 4.1E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 PRINTS PR00344 Bacterial sensor protein C-terminal signature 657 670 4.1E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 4.1E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 PANTHER PTHR24423:SF379 1 15 2.8E-115 T 20-04-2016 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 PANTHER PTHR24423:SF379 418 812 2.8E-115 T 20-04-2016 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 PANTHER PTHR24423:SF379 137 176 2.8E-115 T 20-04-2016 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 SMART SM00388 434 500 2.5E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 542 671 3.0E-16 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 SUPERFAMILY SSF55874 490 673 4.71E-35 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 Gene3D G3DSA:3.30.565.10 486 673 1.2E-35 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 SMART SM00387 541 673 2.0E-25 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 Gene3D G3DSA:1.10.287.130 430 485 3.7E-6 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 SUPERFAMILY SSF52172 697 813 1.24E-29 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 Pfam PF00072 Response regulator receiver domain 699 808 8.2E-20 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS07160 f9dee595cde3adfcb7a7796971462fb7 820 Pfam PF00512 His Kinase A (phospho-acceptor) domain 435 498 1.4E-7 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS04895 2a5d0045305c855858dca21c3e87f713 354 Pfam PF04332 Protein of unknown function (DUF475) 55 345 8.3E-107 T 20-04-2016 IPR007427 Protein of unknown function DUF475 AMC99_RS04895 2a5d0045305c855858dca21c3e87f713 354 PANTHER PTHR30238 122 170 5.9E-110 T 20-04-2016 AMC99_RS04895 2a5d0045305c855858dca21c3e87f713 354 PANTHER PTHR30238 207 346 5.9E-110 T 20-04-2016 AMC99_RS04895 2a5d0045305c855858dca21c3e87f713 354 PANTHER PTHR30238:SF3 122 170 5.9E-110 T 20-04-2016 AMC99_RS04895 2a5d0045305c855858dca21c3e87f713 354 PANTHER PTHR30238:SF3 207 346 5.9E-110 T 20-04-2016 AMC99_RS04895 2a5d0045305c855858dca21c3e87f713 354 PANTHER PTHR30238 1 97 5.9E-110 T 20-04-2016 AMC99_RS04895 2a5d0045305c855858dca21c3e87f713 354 PANTHER PTHR30238:SF3 1 97 5.9E-110 T 20-04-2016 AMC99_RS02120 dbde6e8279d683e0e54011cc8b78e7f8 104 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 4 87 1.8E-30 T 20-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 AMC99_RS02120 dbde6e8279d683e0e54011cc8b78e7f8 104 PANTHER PTHR21256 1 102 1.0E-39 T 20-04-2016 AMC99_RS02120 dbde6e8279d683e0e54011cc8b78e7f8 104 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 5 90 9.2E-18 T 20-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 AMC99_RS02120 dbde6e8279d683e0e54011cc8b78e7f8 104 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 1 87 20.972 T 20-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 AMC99_RS02120 dbde6e8279d683e0e54011cc8b78e7f8 104 SUPERFAMILY SSF101386 2 90 3.27E-25 T 20-04-2016 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 Pfam PF01131 DNA topoisomerase 129 541 1.9E-122 T 20-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 Gene3D G3DSA:1.10.460.10 451 593 6.1E-53 T 20-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 Gene3D G3DSA:1.10.460.10 136 183 6.1E-53 T 20-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 Gene3D G3DSA:3.30.65.10 598 626 3.8E-8 T 20-04-2016 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 Gene3D G3DSA:2.70.20.10 314 450 4.2E-35 T 20-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 Gene3D G3DSA:2.70.20.10 186 306 1.2E-25 T 20-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 3 625 8.3E-217 T 20-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 PANTHER PTHR11390:SF27 1 628 1.5E-299 T 20-04-2016 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 SMART SM00437 246 504 6.4E-104 T 20-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 588 626 1.1E-9 T 20-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 283 297 - T 20-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 SUPERFAMILY SSF57783 598 627 4.93E-7 T 20-04-2016 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 SUPERFAMILY SSF56712 1 555 1.57E-185 T 20-04-2016 IPR023405 DNA topoisomerase, type IA, core domain AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 SUPERFAMILY SSF56712 586 593 1.57E-185 T 20-04-2016 IPR023405 DNA topoisomerase, type IA, core domain AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 288 297 3.4E-33 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 467 481 3.4E-33 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 361 377 3.4E-33 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 163 181 3.4E-33 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 75 88 3.4E-33 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 Pfam PF13368 Topoisomerase C-terminal repeat 769 821 1.8E-18 T 20-04-2016 IPR025589 Topoisomerase C-terminal repeat AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 Pfam PF13368 Topoisomerase C-terminal repeat 701 754 4.6E-19 T 20-04-2016 IPR025589 Topoisomerase C-terminal repeat AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 Pfam PF13368 Topoisomerase C-terminal repeat 645 696 5.1E-11 T 20-04-2016 IPR025589 Topoisomerase C-terminal repeat AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 SMART SM00436 105 193 2.9E-42 T 20-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 Gene3D G3DSA:3.40.50.140 1 135 3.5E-44 T 20-04-2016 IPR006171 Toprim domain AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 713 50.808 T 20-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 Pfam PF01751 Toprim domain 2 114 2.4E-26 T 20-04-2016 IPR006171 Toprim domain AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 PANTHER PTHR11390 1 628 1.5E-299 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMC99_RS04395 84ddeab62fd47fc3973d7c3133e24603 846 SMART SM00493 1 101 5.6E-30 T 20-04-2016 IPR006171 Toprim domain AMC99_RS09615 276550a27a75f2ffa37132c71edb0968 315 Pfam PF02470 MlaD protein 38 101 1.8E-9 T 20-04-2016 IPR003399 Mce/MlaD AMC99_RS09615 276550a27a75f2ffa37132c71edb0968 315 PANTHER PTHR36698 2 299 7.2E-51 T 20-04-2016 AMC99_RS09615 276550a27a75f2ffa37132c71edb0968 315 PANTHER PTHR36698:SF2 2 299 7.2E-51 T 20-04-2016 AMC99_RS08080 27934bfa06796e15db3a76431456ccc4 198 Pfam PF02525 Flavodoxin-like fold 1 197 8.3E-40 T 20-04-2016 IPR003680 Flavodoxin-like fold AMC99_RS08080 27934bfa06796e15db3a76431456ccc4 198 PANTHER PTHR10204 1 198 5.8E-54 T 20-04-2016 AMC99_RS08080 27934bfa06796e15db3a76431456ccc4 198 Gene3D G3DSA:3.40.50.360 1 198 4.8E-57 T 20-04-2016 IPR029039 Flavoprotein-like domain AMC99_RS08080 27934bfa06796e15db3a76431456ccc4 198 SUPERFAMILY SSF52218 1 198 7.61E-47 T 20-04-2016 IPR029039 Flavoprotein-like domain AMC99_RS08080 27934bfa06796e15db3a76431456ccc4 198 PANTHER PTHR10204:SF37 1 198 5.8E-54 T 20-04-2016 AMC99_RS08080 27934bfa06796e15db3a76431456ccc4 198 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 198 28.283 T 20-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AMC99_RS06395 891c922d21d11aeefa292959a09db47a 549 SUPERFAMILY SSF51905 305 446 4.6E-53 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS06395 891c922d21d11aeefa292959a09db47a 549 SUPERFAMILY SSF51905 3 207 4.6E-53 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS06395 891c922d21d11aeefa292959a09db47a 549 SUPERFAMILY SSF54373 209 305 3.45E-35 T 20-04-2016 AMC99_RS06395 891c922d21d11aeefa292959a09db47a 549 Pfam PF13450 NAD(P)-binding Rossmann-like domain 13 54 9.7E-8 T 20-04-2016 AMC99_RS06395 891c922d21d11aeefa292959a09db47a 549 PANTHER PTHR10617 2 471 9.3E-239 T 20-04-2016 AMC99_RS06395 891c922d21d11aeefa292959a09db47a 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 176 191 2.7E-6 T 20-04-2016 AMC99_RS06395 891c922d21d11aeefa292959a09db47a 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 2.7E-6 T 20-04-2016 AMC99_RS06395 891c922d21d11aeefa292959a09db47a 549 PANTHER PTHR10617:SF107 2 471 9.3E-239 T 20-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 AMC99_RS06395 891c922d21d11aeefa292959a09db47a 549 SUPERFAMILY SSF54862 448 549 6.58E-28 T 20-04-2016 AMC99_RS06395 891c922d21d11aeefa292959a09db47a 549 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 444 546 1.1E-48 T 20-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 AMC99_RS06395 891c922d21d11aeefa292959a09db47a 549 Gene3D G3DSA:3.50.50.60 306 445 7.4E-44 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS06395 891c922d21d11aeefa292959a09db47a 549 Gene3D G3DSA:3.50.50.60 10 47 7.4E-44 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS06395 891c922d21d11aeefa292959a09db47a 549 Gene3D G3DSA:3.50.50.60 114 219 7.4E-44 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11380 310faabb44a884f1b107f1c6efc1dbab 779 SMART SM00843 710 775 3.7E-27 T 20-04-2016 IPR018541 FtsK gamma domain AMC99_RS11380 310faabb44a884f1b107f1c6efc1dbab 779 Pfam PF09397 Ftsk gamma domain 713 771 3.1E-20 T 20-04-2016 IPR018541 FtsK gamma domain AMC99_RS11380 310faabb44a884f1b107f1c6efc1dbab 779 Pfam PF01580 FtsK/SpoIIIE family 392 607 1.8E-58 T 20-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMC99_RS11380 310faabb44a884f1b107f1c6efc1dbab 779 SUPERFAMILY SSF46785 710 775 9.52E-17 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS11380 310faabb44a884f1b107f1c6efc1dbab 779 PANTHER PTHR22683 215 775 3.2E-217 T 20-04-2016 AMC99_RS11380 310faabb44a884f1b107f1c6efc1dbab 779 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 32 189 2.3E-20 T 20-04-2016 IPR025199 DNA translocase FtsK, 4TM region AMC99_RS11380 310faabb44a884f1b107f1c6efc1dbab 779 Gene3D G3DSA:3.40.50.300 365 672 9.1E-85 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11380 310faabb44a884f1b107f1c6efc1dbab 779 SUPERFAMILY SSF52540 367 679 1.8E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11380 310faabb44a884f1b107f1c6efc1dbab 779 PANTHER PTHR22683:SF41 215 775 3.2E-217 T 20-04-2016 AMC99_RS11100 9929a2852b9724cdf73e15c6e084ed9a 207 PANTHER PTHR33508:SF1 1 207 1.4E-60 T 20-04-2016 AMC99_RS11100 9929a2852b9724cdf73e15c6e084ed9a 207 Pfam PF01914 MarC family integral membrane protein 3 204 1.3E-52 T 20-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMC99_RS11100 9929a2852b9724cdf73e15c6e084ed9a 207 PANTHER PTHR33508 1 207 1.4E-60 T 20-04-2016 AMC99_RS11100 9929a2852b9724cdf73e15c6e084ed9a 207 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 201 5.8E-51 T 20-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMC99_RS00505 7f4146fa3ee338aa4c1a3bf75a598d45 209 Pfam PF03713 Domain of unknown function (DUF305) 109 189 1.6E-9 T 20-04-2016 IPR005183 Domain of unknown function DUF305 AMC99_RS00505 7f4146fa3ee338aa4c1a3bf75a598d45 209 Gene3D G3DSA:1.20.1260.10 57 160 3.2E-16 T 20-04-2016 IPR012347 Ferritin-related AMC99_RS00505 7f4146fa3ee338aa4c1a3bf75a598d45 209 SUPERFAMILY SSF103473 19 103 6.28E-5 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS11560 dd8d393abb01b3e87a67e7276ae2bc0a 523 PANTHER PTHR11785:SF405 1 300 3.1E-141 T 20-04-2016 AMC99_RS11560 dd8d393abb01b3e87a67e7276ae2bc0a 523 PIRSF PIRSF006060 12 514 6.1E-76 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS11560 dd8d393abb01b3e87a67e7276ae2bc0a 523 PANTHER PTHR11785 325 515 3.1E-141 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS11560 dd8d393abb01b3e87a67e7276ae2bc0a 523 PANTHER PTHR11785 1 300 3.1E-141 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS11560 dd8d393abb01b3e87a67e7276ae2bc0a 523 Pfam PF13520 Amino acid permease 28 472 1.4E-48 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS11560 dd8d393abb01b3e87a67e7276ae2bc0a 523 PANTHER PTHR11785:SF405 325 515 3.1E-141 T 20-04-2016 AMC99_RS01540 f4fb3a42c50ddc18792bbc00a08405f7 363 Pfam PF00487 Fatty acid desaturase 74 333 3.2E-28 T 20-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 Gene3D G3DSA:3.40.50.970 301 497 1.3E-74 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 Pfam PF02780 Transketolase, C-terminal domain 497 620 1.1E-28 T 20-04-2016 IPR033248 Transketolase, C-terminal domain AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 PANTHER PTHR11624 241 640 5.8E-302 T 20-04-2016 IPR033247 Transketolase family AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 20-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 283 1.2E-117 T 20-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 PANTHER PTHR11624 23 217 5.8E-302 T 20-04-2016 IPR033247 Transketolase family AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 SMART SM00861 320 485 3.5E-66 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 SUPERFAMILY SSF52922 493 628 6.54E-35 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 13 628 1.1E-242 T 20-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 SUPERFAMILY SSF52518 318 506 2.36E-60 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 Gene3D G3DSA:3.40.50.970 7 194 4.1E-63 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 Gene3D G3DSA:3.40.50.970 239 300 4.1E-63 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 Gene3D G3DSA:3.40.50.920 498 628 4.5E-36 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 629 44.249 T 20-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 1.5E-39 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 SUPERFAMILY SSF52518 6 198 1.3E-78 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 SUPERFAMILY SSF52518 243 382 1.3E-78 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 PANTHER PTHR11624:SF20 241 640 5.8E-302 T 20-04-2016 AMC99_RS11895 1573c70534d5427c32a3ea31ccd987ee 640 PANTHER PTHR11624:SF20 23 217 5.8E-302 T 20-04-2016 AMC99_RS10310 766bc86fe5bcf052412e10640c38d251 1938 SMART SM00671 1852 1887 0.024 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS10310 766bc86fe5bcf052412e10640c38d251 1938 SMART SM00671 1816 1851 49.0 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS10310 766bc86fe5bcf052412e10640c38d251 1938 SUPERFAMILY SSF52540 302 480 2.99E-6 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10310 766bc86fe5bcf052412e10640c38d251 1938 PANTHER PTHR19860 5 92 1.1E-17 T 20-04-2016 AMC99_RS10310 766bc86fe5bcf052412e10640c38d251 1938 Gene3D G3DSA:1.25.40.10 1796 1929 1.1E-14 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS10310 766bc86fe5bcf052412e10640c38d251 1938 Gene3D G3DSA:2.130.10.10 786 1017 3.6E-11 T 20-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AMC99_RS10310 766bc86fe5bcf052412e10640c38d251 1938 SUPERFAMILY SSF51004 947 1196 7.06E-6 T 20-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AMC99_RS10310 766bc86fe5bcf052412e10640c38d251 1938 Gene3D G3DSA:3.40.50.300 1364 1475 8.3E-4 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10310 766bc86fe5bcf052412e10640c38d251 1938 Gene3D G3DSA:3.40.50.300 292 346 8.3E-4 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10310 766bc86fe5bcf052412e10640c38d251 1938 Pfam PF13271 Domain of unknown function (DUF4062) 5 95 1.5E-4 T 20-04-2016 IPR025139 Domain of unknown function DUF4062 AMC99_RS10310 766bc86fe5bcf052412e10640c38d251 1938 SUPERFAMILY SSF50998 792 905 2.35E-12 T 20-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMC99_RS10310 766bc86fe5bcf052412e10640c38d251 1938 SUPERFAMILY SSF50998 943 989 2.35E-12 T 20-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMC99_RS10310 766bc86fe5bcf052412e10640c38d251 1938 SUPERFAMILY SSF81901 1796 1933 1.57E-12 T 20-04-2016 AMC99_RS10050 208794f56dcbd23aca7a8777e1b993be 465 PANTHER PTHR23546 237 465 2.5E-32 T 20-04-2016 AMC99_RS10050 208794f56dcbd23aca7a8777e1b993be 465 PANTHER PTHR23546 10 219 2.5E-32 T 20-04-2016 AMC99_RS10050 208794f56dcbd23aca7a8777e1b993be 465 Pfam PF07690 Major Facilitator Superfamily 31 421 5.8E-37 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS10050 208794f56dcbd23aca7a8777e1b993be 465 SUPERFAMILY SSF103473 262 451 3.66E-50 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS10050 208794f56dcbd23aca7a8777e1b993be 465 SUPERFAMILY SSF103473 28 229 3.66E-50 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS10050 208794f56dcbd23aca7a8777e1b993be 465 Gene3D G3DSA:1.20.1250.20 26 215 4.5E-26 T 20-04-2016 AMC99_RS10050 208794f56dcbd23aca7a8777e1b993be 465 Gene3D G3DSA:1.20.1250.20 265 451 2.5E-14 T 20-04-2016 AMC99_RS10050 208794f56dcbd23aca7a8777e1b993be 465 PANTHER PTHR23546:SF1 237 465 2.5E-32 T 20-04-2016 AMC99_RS10050 208794f56dcbd23aca7a8777e1b993be 465 PANTHER PTHR23546:SF1 10 219 2.5E-32 T 20-04-2016 AMC99_RS05320 d958a383855144f064fdd96c034260ed 678 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 238 1.4E-40 T 20-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMC99_RS05320 d958a383855144f064fdd96c034260ed 678 SUPERFAMILY SSF56601 253 595 1.58E-84 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS05320 d958a383855144f064fdd96c034260ed 678 Gene3D G3DSA:3.90.1310.10 132 251 2.1E-28 T 20-04-2016 AMC99_RS05320 d958a383855144f064fdd96c034260ed 678 Pfam PF00905 Penicillin binding protein transpeptidase domain 270 590 1.4E-56 T 20-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMC99_RS05320 d958a383855144f064fdd96c034260ed 678 SUPERFAMILY SSF56519 59 252 4.45E-44 T 20-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMC99_RS05320 d958a383855144f064fdd96c034260ed 678 PANTHER PTHR30627 7 590 3.0E-156 T 20-04-2016 AMC99_RS05320 d958a383855144f064fdd96c034260ed 678 PANTHER PTHR30627:SF2 7 590 3.0E-156 T 20-04-2016 AMC99_RS05320 d958a383855144f064fdd96c034260ed 678 Gene3D G3DSA:3.40.710.10 252 595 3.5E-89 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS05320 d958a383855144f064fdd96c034260ed 678 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 595 9.6E-197 T 20-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 AMC99_RS04710 afcacb3cbfb4f04f16a77a7e2f00dcf9 59 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 20-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 AMC99_RS04710 afcacb3cbfb4f04f16a77a7e2f00dcf9 59 PANTHER PTHR21659 3 48 4.6E-15 T 20-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 AMC99_RS04710 afcacb3cbfb4f04f16a77a7e2f00dcf9 59 Pfam PF01679 Proteolipid membrane potential modulator 3 48 6.3E-18 T 20-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 AMC99_RS06460 d4f4bea1f5ea0d96e974c23e14761b81 224 PANTHER PTHR24220:SF111 7 223 1.3E-90 T 20-04-2016 AMC99_RS06460 d4f4bea1f5ea0d96e974c23e14761b81 224 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_RS06460 d4f4bea1f5ea0d96e974c23e14761b81 224 SUPERFAMILY SSF52540 6 223 1.77E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06460 d4f4bea1f5ea0d96e974c23e14761b81 224 PANTHER PTHR24220 7 223 1.3E-90 T 20-04-2016 AMC99_RS06460 d4f4bea1f5ea0d96e974c23e14761b81 224 Gene3D G3DSA:3.40.50.300 3 223 1.2E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06460 d4f4bea1f5ea0d96e974c23e14761b81 224 SMART SM00382 34 222 3.9E-14 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS06460 d4f4bea1f5ea0d96e974c23e14761b81 224 Pfam PF00005 ABC transporter 25 173 2.3E-31 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS11515 ce0e8756d722a632ff1263a056f3563b 283 Gene3D G3DSA:3.10.129.10 132 261 1.3E-12 T 20-04-2016 IPR029069 HotDog domain AMC99_RS11515 ce0e8756d722a632ff1263a056f3563b 283 PANTHER PTHR28152 39 270 1.0E-52 T 20-04-2016 AMC99_RS11515 ce0e8756d722a632ff1263a056f3563b 283 SUPERFAMILY SSF54637 171 282 3.56E-15 T 20-04-2016 IPR029069 HotDog domain AMC99_RS11515 ce0e8756d722a632ff1263a056f3563b 283 SUPERFAMILY SSF54637 71 148 7.46E-7 T 20-04-2016 IPR029069 HotDog domain AMC99_RS11515 ce0e8756d722a632ff1263a056f3563b 283 Pfam PF13452 N-terminal half of MaoC dehydratase 75 137 1.0E-6 T 20-04-2016 AMC99_RS00745 b0be145fa50cfcce5a7ab923319b3f9c 111 PIRSF PIRSF021239 1 111 4.1E-43 T 20-04-2016 IPR007437 Putative member of DMT superfamily AMC99_RS00745 b0be145fa50cfcce5a7ab923319b3f9c 111 Pfam PF04342 Putative member of DMT superfamily (DUF486) 3 108 2.4E-42 T 20-04-2016 IPR007437 Putative member of DMT superfamily AMC99_RS00745 b0be145fa50cfcce5a7ab923319b3f9c 111 PANTHER PTHR38482 1 111 2.4E-42 T 20-04-2016 AMC99_RS02175 9c5ad050af5d34a9e98ac9d9a1e2409e 263 PANTHER PTHR24322 156 188 1.9E-24 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02175 9c5ad050af5d34a9e98ac9d9a1e2409e 263 PANTHER PTHR24322 10 140 1.9E-24 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02175 9c5ad050af5d34a9e98ac9d9a1e2409e 263 PANTHER PTHR24322:SF360 156 188 1.9E-24 T 20-04-2016 AMC99_RS02175 9c5ad050af5d34a9e98ac9d9a1e2409e 263 PANTHER PTHR24322:SF360 10 140 1.9E-24 T 20-04-2016 AMC99_RS02175 9c5ad050af5d34a9e98ac9d9a1e2409e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02175 9c5ad050af5d34a9e98ac9d9a1e2409e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.1E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02175 9c5ad050af5d34a9e98ac9d9a1e2409e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.1E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02175 9c5ad050af5d34a9e98ac9d9a1e2409e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.1E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02175 9c5ad050af5d34a9e98ac9d9a1e2409e 263 SUPERFAMILY SSF51735 4 234 1.26E-34 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02175 9c5ad050af5d34a9e98ac9d9a1e2409e 263 Gene3D G3DSA:3.40.50.720 5 236 6.5E-34 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02175 9c5ad050af5d34a9e98ac9d9a1e2409e 263 Pfam PF00106 short chain dehydrogenase 7 185 1.1E-21 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS00940 b4761af8e91b24b9e95d2dde83feb129 327 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 275 1.6E-12 T 20-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMC99_RS00940 b4761af8e91b24b9e95d2dde83feb129 327 PANTHER PTHR30469 1 277 1.3E-24 T 20-04-2016 AMC99_RS00940 b4761af8e91b24b9e95d2dde83feb129 327 Gene3D G3DSA:2.40.50.100 72 104 2.6E-10 T 20-04-2016 AMC99_RS00940 b4761af8e91b24b9e95d2dde83feb129 327 Gene3D G3DSA:2.40.50.100 193 217 2.6E-10 T 20-04-2016 AMC99_RS00940 b4761af8e91b24b9e95d2dde83feb129 327 PANTHER PTHR30469:SF15 1 277 1.3E-24 T 20-04-2016 AMC99_RS00940 b4761af8e91b24b9e95d2dde83feb129 327 SUPERFAMILY SSF111369 70 249 2.75E-15 T 20-04-2016 AMC99_RS13735 63a17c2bf90273e4c964b344fbe6afc2 104 Pfam PF06844 Protein of unknown function (DUF1244) 34 96 9.1E-28 T 20-04-2016 IPR023163 SMc04008-like domain AMC99_RS13735 63a17c2bf90273e4c964b344fbe6afc2 104 SUPERFAMILY SSF158757 11 80 1.44E-28 T 20-04-2016 IPR023163 SMc04008-like domain AMC99_RS13735 63a17c2bf90273e4c964b344fbe6afc2 104 Gene3D G3DSA:1.10.3340.10 11 87 5.4E-31 T 20-04-2016 IPR023163 SMc04008-like domain AMC99_RS00560 d7c38497b7e49ce9d49f9f851935b9d7 239 Gene3D G3DSA:3.40.50.2300 14 137 3.0E-31 T 20-04-2016 AMC99_RS00560 d7c38497b7e49ce9d49f9f851935b9d7 239 SUPERFAMILY SSF52172 13 138 7.12E-33 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS00560 d7c38497b7e49ce9d49f9f851935b9d7 239 PANTHER PTHR26402:SF578 15 235 1.3E-74 T 20-04-2016 AMC99_RS00560 d7c38497b7e49ce9d49f9f851935b9d7 239 SMART SM00448 15 126 4.0E-30 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS00560 d7c38497b7e49ce9d49f9f851935b9d7 239 Gene3D G3DSA:1.10.10.10 138 235 9.7E-31 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS00560 d7c38497b7e49ce9d49f9f851935b9d7 239 SUPERFAMILY SSF46894 138 236 1.39E-27 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_RS00560 d7c38497b7e49ce9d49f9f851935b9d7 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 235 9.1E-26 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS00560 d7c38497b7e49ce9d49f9f851935b9d7 239 PANTHER PTHR26402 15 235 1.3E-74 T 20-04-2016 AMC99_RS00560 d7c38497b7e49ce9d49f9f851935b9d7 239 Pfam PF00072 Response regulator receiver domain 17 127 2.0E-20 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS00560 d7c38497b7e49ce9d49f9f851935b9d7 239 SMART SM00862 160 235 6.6E-26 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS07695 35b1f13c0908c05aa29152328c149d06 132 PANTHER PTHR14289 11 128 3.1E-48 T 20-04-2016 AMC99_RS07695 35b1f13c0908c05aa29152328c149d06 132 SUPERFAMILY SSF110069 10 130 2.75E-46 T 20-04-2016 IPR007474 ApaG domain AMC99_RS07695 35b1f13c0908c05aa29152328c149d06 132 Pfam PF04379 Protein of unknown function (DUF525) 24 109 2.2E-34 T 20-04-2016 IPR007474 ApaG domain AMC99_RS07695 35b1f13c0908c05aa29152328c149d06 132 Hamap MF_00791 Protein ApaG [apaG]. 7 132 28.446 T 20-04-2016 IPR023065 Uncharacterised protein family ApaG AMC99_RS07695 35b1f13c0908c05aa29152328c149d06 132 Gene3D G3DSA:2.60.40.1470 9 129 4.6E-46 T 20-04-2016 IPR007474 ApaG domain AMC99_RS01295 444a352c482d9c870cab29218f14770d 201 Gene3D G3DSA:1.10.8.10 152 198 2.4E-10 T 20-04-2016 AMC99_RS01295 444a352c482d9c870cab29218f14770d 201 Gene3D G3DSA:1.10.150.20 68 135 2.5E-24 T 20-04-2016 AMC99_RS01295 444a352c482d9c870cab29218f14770d 201 SMART SM00278 108 127 19.0 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMC99_RS01295 444a352c482d9c870cab29218f14770d 201 SMART SM00278 73 92 1.5 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMC99_RS01295 444a352c482d9c870cab29218f14770d 201 Pfam PF01330 RuvA N terminal domain 1 62 9.9E-18 T 20-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMC99_RS01295 444a352c482d9c870cab29218f14770d 201 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 200 25.975 T 20-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AMC99_RS01295 444a352c482d9c870cab29218f14770d 201 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.0E-13 T 20-04-2016 AMC99_RS01295 444a352c482d9c870cab29218f14770d 201 SUPERFAMILY SSF47781 66 132 1.87E-18 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMC99_RS01295 444a352c482d9c870cab29218f14770d 201 Pfam PF07499 RuvA, C-terminal domain 153 198 1.9E-10 T 20-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AMC99_RS01295 444a352c482d9c870cab29218f14770d 201 SUPERFAMILY SSF50249 1 63 1.2E-13 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS01295 444a352c482d9c870cab29218f14770d 201 PANTHER PTHR33796 2 201 4.9E-57 T 20-04-2016 AMC99_RS01295 444a352c482d9c870cab29218f14770d 201 SUPERFAMILY SSF46929 154 198 1.05E-7 T 20-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AMC99_RS01295 444a352c482d9c870cab29218f14770d 201 Gene3D G3DSA:2.40.50.140 1 65 8.0E-21 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS02005 a007da2f05f7142fa7eadfd9022cab90 192 Pfam PF01161 Phosphatidylethanolamine-binding protein 51 177 1.4E-20 T 20-04-2016 IPR008914 Phosphatidylethanolamine-binding protein AMC99_RS02005 a007da2f05f7142fa7eadfd9022cab90 192 SUPERFAMILY SSF49777 31 171 1.31E-23 T 20-04-2016 IPR008914 Phosphatidylethanolamine-binding protein AMC99_RS02005 a007da2f05f7142fa7eadfd9022cab90 192 PANTHER PTHR30289 34 187 4.7E-14 T 20-04-2016 AMC99_RS02005 a007da2f05f7142fa7eadfd9022cab90 192 Gene3D G3DSA:3.90.280.10 34 179 2.9E-30 T 20-04-2016 IPR008914 Phosphatidylethanolamine-binding protein AMC99_RS06510 a0183234b15dd7bb06cf0555686805f6 348 SUPERFAMILY SSF52518 15 319 2.53E-70 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS06510 a0183234b15dd7bb06cf0555686805f6 348 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 55 201 1.4E-27 T 20-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMC99_RS06510 a0183234b15dd7bb06cf0555686805f6 348 PANTHER PTHR18968:SF89 6 318 4.5E-105 T 20-04-2016 AMC99_RS06510 a0183234b15dd7bb06cf0555686805f6 348 Gene3D G3DSA:3.40.50.970 21 242 1.8E-75 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS06510 a0183234b15dd7bb06cf0555686805f6 348 PANTHER PTHR18968 6 318 4.5E-105 T 20-04-2016 AMC99_RS06805 6f4158e83d7d24f94fef98fe8d0a5bf5 176 SUPERFAMILY SSF55729 22 159 5.83E-19 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS06805 6f4158e83d7d24f94fef98fe8d0a5bf5 176 Pfam PF00583 Acetyltransferase (GNAT) family 84 156 1.0E-7 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS06805 6f4158e83d7d24f94fef98fe8d0a5bf5 176 Gene3D G3DSA:3.40.630.30 20 165 3.0E-15 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS11900 9c2fae87ce4e476586e93c6e8b5a52fa 160 Gene3D G3DSA:1.10.10.10 24 94 6.6E-8 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS11900 9c2fae87ce4e476586e93c6e8b5a52fa 160 Pfam PF01475 Ferric uptake regulator family 32 148 1.7E-11 T 20-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMC99_RS11900 9c2fae87ce4e476586e93c6e8b5a52fa 160 PANTHER PTHR33202:SF6 1 159 1.5E-28 T 20-04-2016 AMC99_RS11900 9c2fae87ce4e476586e93c6e8b5a52fa 160 PANTHER PTHR33202 1 159 1.5E-28 T 20-04-2016 AMC99_RS11900 9c2fae87ce4e476586e93c6e8b5a52fa 160 SUPERFAMILY SSF46785 25 156 1.5E-23 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS13160 424d2ba67af21f389bc9c134a9963d78 295 SMART SM00342 173 257 6.5E-6 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_RS13160 424d2ba67af21f389bc9c134a9963d78 295 Gene3D G3DSA:1.10.10.60 230 262 1.4E-7 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS13160 424d2ba67af21f389bc9c134a9963d78 295 Gene3D G3DSA:1.10.10.60 176 211 7.9E-4 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS13160 424d2ba67af21f389bc9c134a9963d78 295 Pfam PF12833 Helix-turn-helix domain 180 258 5.4E-14 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_RS13160 424d2ba67af21f389bc9c134a9963d78 295 SUPERFAMILY SSF46689 229 260 1.61E-5 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 PANTHER PTHR10996:SF20 1 359 2.9E-168 T 20-04-2016 AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 SUPERFAMILY SSF55021 454 526 1.62E-16 T 20-04-2016 AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 SUPERFAMILY SSF52283 3 137 2.27E-37 T 20-04-2016 AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 SUPERFAMILY SSF143548 321 449 3.14E-34 T 20-04-2016 IPR029009 Allosteric substrate binding domain AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 PANTHER PTHR10996 1 359 2.9E-168 T 20-04-2016 AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 Gene3D G3DSA:3.40.50.720 1 108 2.3E-41 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 5 525 1.9E-196 T 20-04-2016 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 Gene3D G3DSA:3.30.1330.90 320 450 4.6E-41 T 20-04-2016 IPR029009 Allosteric substrate binding domain AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 193 215 - T 20-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 SUPERFAMILY SSF51735 99 284 3.63E-60 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 20-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 Gene3D G3DSA:3.40.50.720 109 285 5.3E-70 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 Gene3D G3DSA:3.30.70.260 451 524 3.3E-17 T 20-04-2016 AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 Pfam PF01842 ACT domain 455 518 3.0E-7 T 20-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 315 1.0E-35 T 20-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AMC99_RS08840 8bc83781ae26ec52346114cbda7a9cbe 528 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 283 2.4E-62 T 20-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMC99_RS13000 a5d43acc185bf62f69c999ab69634082 430 Gene3D G3DSA:1.20.810.10 16 403 1.8E-161 T 20-04-2016 IPR027387 Cytochrome b/b6-like domain AMC99_RS13000 a5d43acc185bf62f69c999ab69634082 430 PANTHER PTHR19271:SF9 13 430 1.9E-194 T 20-04-2016 AMC99_RS13000 a5d43acc185bf62f69c999ab69634082 430 PIRSF PIRSF038885 7 417 1.7E-196 T 20-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 AMC99_RS13000 a5d43acc185bf62f69c999ab69634082 430 SUPERFAMILY SSF81342 28 280 1.0E-103 T 20-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 AMC99_RS13000 a5d43acc185bf62f69c999ab69634082 430 SUPERFAMILY SSF81648 281 401 5.23E-33 T 20-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 AMC99_RS13000 a5d43acc185bf62f69c999ab69634082 430 PANTHER PTHR19271 13 430 1.9E-194 T 20-04-2016 AMC99_RS13000 a5d43acc185bf62f69c999ab69634082 430 Pfam PF00033 Cytochrome b/b6/petB 36 219 2.7E-72 T 20-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 AMC99_RS13000 a5d43acc185bf62f69c999ab69634082 430 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 278 386 1.0E-37 T 20-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 AMC99_RS10060 c672de061eca0a943e4039b856ad15a7 694 Pfam PF00593 TonB dependent receptor 459 692 2.2E-32 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS10060 c672de061eca0a943e4039b856ad15a7 694 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 691 1.1E-90 T 20-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AMC99_RS10060 c672de061eca0a943e4039b856ad15a7 694 Gene3D G3DSA:2.40.170.20 179 692 3.2E-124 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS10060 c672de061eca0a943e4039b856ad15a7 694 PANTHER PTHR32552:SF10 22 694 8.7E-112 T 20-04-2016 AMC99_RS10060 c672de061eca0a943e4039b856ad15a7 694 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 162 2.0E-19 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS10060 c672de061eca0a943e4039b856ad15a7 694 SUPERFAMILY SSF56935 29 693 3.05E-123 T 20-04-2016 AMC99_RS10060 c672de061eca0a943e4039b856ad15a7 694 Gene3D G3DSA:2.170.130.10 46 169 2.7E-36 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS10060 c672de061eca0a943e4039b856ad15a7 694 PANTHER PTHR32552 22 694 8.7E-112 T 20-04-2016 AMC99_RS06960 db227788b9a78390fdaabb3ae003c7f9 251 Gene3D G3DSA:3.60.15.10 4 251 9.9E-77 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS06960 db227788b9a78390fdaabb3ae003c7f9 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 251 39.156 T 20-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 AMC99_RS06960 db227788b9a78390fdaabb3ae003c7f9 251 Pfam PF00753 Metallo-beta-lactamase superfamily 30 169 2.8E-18 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS06960 db227788b9a78390fdaabb3ae003c7f9 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 7.5E-91 T 20-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 AMC99_RS06960 db227788b9a78390fdaabb3ae003c7f9 251 PANTHER PTHR11935:SF7 1 251 6.1E-85 T 20-04-2016 AMC99_RS06960 db227788b9a78390fdaabb3ae003c7f9 251 PIRSF PIRSF005457 1 251 1.6E-97 T 20-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 AMC99_RS06960 db227788b9a78390fdaabb3ae003c7f9 251 SUPERFAMILY SSF56281 2 251 3.64E-70 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS06960 db227788b9a78390fdaabb3ae003c7f9 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 170 251 3.3E-24 T 20-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 AMC99_RS06960 db227788b9a78390fdaabb3ae003c7f9 251 SMART SM00849 12 169 3.8E-31 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS06960 db227788b9a78390fdaabb3ae003c7f9 251 PANTHER PTHR11935 1 251 6.1E-85 T 20-04-2016 AMC99_RS07945 29aa8bcb0ce8b73138164b65eb656fbc 345 Gene3D G3DSA:1.10.1670.10 127 226 1.2E-37 T 20-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMC99_RS07945 29aa8bcb0ce8b73138164b65eb656fbc 345 PANTHER PTHR10359 6 303 2.1E-79 T 20-04-2016 AMC99_RS07945 29aa8bcb0ce8b73138164b65eb656fbc 345 SUPERFAMILY SSF55811 222 339 4.36E-19 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS07945 29aa8bcb0ce8b73138164b65eb656fbc 345 SMART SM00525 193 213 0.0045 T 20-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 AMC99_RS07945 29aa8bcb0ce8b73138164b65eb656fbc 345 Pfam PF00633 Helix-hairpin-helix motif 106 132 8.3E-7 T 20-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 AMC99_RS07945 29aa8bcb0ce8b73138164b65eb656fbc 345 Gene3D G3DSA:1.10.340.30 32 126 3.2E-39 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMC99_RS07945 29aa8bcb0ce8b73138164b65eb656fbc 345 PANTHER PTHR10359:SF1 6 303 2.1E-79 T 20-04-2016 AMC99_RS07945 29aa8bcb0ce8b73138164b65eb656fbc 345 SUPERFAMILY SSF48150 7 224 1.73E-66 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMC99_RS07945 29aa8bcb0ce8b73138164b65eb656fbc 345 Pfam PF14815 NUDIX domain 237 337 8.9E-17 T 20-04-2016 IPR029119 MutY, C-terminal AMC99_RS07945 29aa8bcb0ce8b73138164b65eb656fbc 345 SMART SM00478 45 192 1.2E-38 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMC99_RS07945 29aa8bcb0ce8b73138164b65eb656fbc 345 Gene3D G3DSA:3.90.79.10 231 342 9.5E-12 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS07945 29aa8bcb0ce8b73138164b65eb656fbc 345 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 42 173 4.9E-18 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMC99_RS07945 29aa8bcb0ce8b73138164b65eb656fbc 345 ProSitePatterns PS01155 Endonuclease III family signature. 106 133 - T 20-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 AMC99_RS06280 106f692be328062fc97f4faa305282e9 307 PANTHER PTHR11941:SF13 86 275 1.0E-27 T 20-04-2016 AMC99_RS06280 106f692be328062fc97f4faa305282e9 307 PANTHER PTHR11941 86 275 1.0E-27 T 20-04-2016 AMC99_RS06280 106f692be328062fc97f4faa305282e9 307 Pfam PF00378 Enoyl-CoA hydratase/isomerase 86 226 1.8E-22 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMC99_RS06280 106f692be328062fc97f4faa305282e9 307 SUPERFAMILY SSF52096 43 280 5.32E-37 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS06280 106f692be328062fc97f4faa305282e9 307 Gene3D G3DSA:3.90.226.10 45 272 3.9E-39 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS08325 4cbe6c248ed6952e9c0d41dd29a667c6 204 Gene3D G3DSA:3.20.19.10 6 185 5.4E-44 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMC99_RS08325 4cbe6c248ed6952e9c0d41dd29a667c6 204 PANTHER PTHR11670:SF27 1 190 1.4E-73 T 20-04-2016 AMC99_RS08325 4cbe6c248ed6952e9c0d41dd29a667c6 204 Pfam PF00694 Aconitase C-terminal domain 3 117 8.4E-28 T 20-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08325 4cbe6c248ed6952e9c0d41dd29a667c6 204 PANTHER PTHR11670 1 190 1.4E-73 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08325 4cbe6c248ed6952e9c0d41dd29a667c6 204 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 178 1.4E-56 T 20-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS08325 4cbe6c248ed6952e9c0d41dd29a667c6 204 SUPERFAMILY SSF52016 1 187 1.63E-53 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMC99_RS08325 4cbe6c248ed6952e9c0d41dd29a667c6 204 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 192 36.397 T 20-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMC99_RS11695 5502833393f2e820fae6022a87f6978c 293 Pfam PF00483 Nucleotidyl transferase 14 273 1.2E-24 T 20-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMC99_RS11695 5502833393f2e820fae6022a87f6978c 293 PANTHER PTHR22572 9 293 3.3E-90 T 20-04-2016 AMC99_RS11695 5502833393f2e820fae6022a87f6978c 293 SUPERFAMILY SSF53448 8 281 9.91E-60 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS11695 5502833393f2e820fae6022a87f6978c 293 Gene3D G3DSA:3.90.550.10 8 279 3.1E-60 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS11695 5502833393f2e820fae6022a87f6978c 293 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 7 269 1.6E-99 T 20-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 AMC99_RS11695 5502833393f2e820fae6022a87f6978c 293 PANTHER PTHR22572:SF14 9 293 3.3E-90 T 20-04-2016 AMC99_RS04335 6c51eec410a9c1299cbedb1925ce2c9a 392 PIRSF PIRSF038941 9 392 1.2E-149 T 20-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 AMC99_RS04335 6c51eec410a9c1299cbedb1925ce2c9a 392 Gene3D G3DSA:3.20.20.10 38 254 9.3E-22 T 20-04-2016 IPR029066 PLP-binding barrel AMC99_RS04335 6c51eec410a9c1299cbedb1925ce2c9a 392 SUPERFAMILY SSF50621 230 380 2.05E-25 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMC99_RS04335 6c51eec410a9c1299cbedb1925ce2c9a 392 PANTHER PTHR11482:SF38 16 392 4.0E-137 T 20-04-2016 AMC99_RS04335 6c51eec410a9c1299cbedb1925ce2c9a 392 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 297 367 4.6E-7 T 20-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 AMC99_RS04335 6c51eec410a9c1299cbedb1925ce2c9a 392 PANTHER PTHR11482 16 392 4.0E-137 T 20-04-2016 AMC99_RS04335 6c51eec410a9c1299cbedb1925ce2c9a 392 Gene3D G3DSA:2.40.37.10 255 369 4.4E-17 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMC99_RS04335 6c51eec410a9c1299cbedb1925ce2c9a 392 SUPERFAMILY SSF51419 27 263 1.89E-40 T 20-04-2016 IPR029066 PLP-binding barrel AMC99_RS05325 2cb013a96eb9aa5bcb589be336690ef0 184 Pfam PF04093 rod shape-determining protein MreD 30 165 2.0E-5 T 20-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AMC99_RS04455 7714462637ea4a588abb8dafddd141fb 339 Gene3D G3DSA:3.40.50.720 4 328 4.0E-53 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS04455 7714462637ea4a588abb8dafddd141fb 339 SUPERFAMILY SSF51735 4 331 4.03E-56 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS04455 7714462637ea4a588abb8dafddd141fb 339 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 243 1.4E-21 T 20-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMC99_RS04455 7714462637ea4a588abb8dafddd141fb 339 PANTHER PTHR10366 4 338 9.5E-88 T 20-04-2016 AMC99_RS04455 7714462637ea4a588abb8dafddd141fb 339 PANTHER PTHR10366:SF267 4 338 9.5E-88 T 20-04-2016 AMC99_RS12445 acb6b82df29c184f0fb7e2df5365ba75 214 Pfam PF02527 rRNA small subunit methyltransferase G 22 183 1.1E-34 T 20-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMC99_RS12445 acb6b82df29c184f0fb7e2df5365ba75 214 PANTHER PTHR31760:SF0 17 185 7.7E-31 T 20-04-2016 AMC99_RS12445 acb6b82df29c184f0fb7e2df5365ba75 214 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 28 183 7.1E-35 T 20-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMC99_RS12445 acb6b82df29c184f0fb7e2df5365ba75 214 SUPERFAMILY SSF53335 17 183 1.82E-24 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS12445 acb6b82df29c184f0fb7e2df5365ba75 214 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 187 22.604 T 20-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMC99_RS12445 acb6b82df29c184f0fb7e2df5365ba75 214 Gene3D G3DSA:3.40.50.150 18 201 2.5E-47 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS12445 acb6b82df29c184f0fb7e2df5365ba75 214 PANTHER PTHR31760 17 185 7.7E-31 T 20-04-2016 AMC99_RS08785 73aac36dabc3e19bf8ee52e44874874d 322 SUPERFAMILY SSF52172 19 131 2.09E-6 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS08785 73aac36dabc3e19bf8ee52e44874874d 322 Gene3D G3DSA:1.10.10.10 209 313 4.0E-9 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS08785 73aac36dabc3e19bf8ee52e44874874d 322 SUPERFAMILY SSF46785 201 313 2.54E-9 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS09290 1dc5cffbc423f87d6a09123c762430c9 707 PANTHER PTHR12815:SF11 165 707 1.2E-36 T 20-04-2016 AMC99_RS09290 1dc5cffbc423f87d6a09123c762430c9 707 PANTHER PTHR12815 165 707 1.2E-36 T 20-04-2016 AMC99_RS09290 1dc5cffbc423f87d6a09123c762430c9 707 Gene3D G3DSA:2.40.160.50 505 707 4.4E-22 T 20-04-2016 AMC99_RS09290 1dc5cffbc423f87d6a09123c762430c9 707 Pfam PF01103 Surface antigen 410 707 9.6E-32 T 20-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 AMC99_RS05250 9f383f4b237221b81d84e922c1be65d5 162 SUPERFAMILY SSF55729 3 161 3.43E-28 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS05250 9f383f4b237221b81d84e922c1be65d5 162 Pfam PF13673 Acetyltransferase (GNAT) domain 32 138 2.7E-14 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS05250 9f383f4b237221b81d84e922c1be65d5 162 Gene3D G3DSA:3.40.630.30 3 161 1.6E-34 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS12150 a43543daf0d0d427a3401db43a10da77 167 PANTHER PTHR13696 72 164 4.2E-23 T 20-04-2016 AMC99_RS12150 a43543daf0d0d427a3401db43a10da77 167 TIGRFAM TIGR02945 SUF_assoc: FeS assembly SUF system protein 70 167 8.7E-45 T 20-04-2016 IPR014291 SUF system FeS cluster assembly associated AMC99_RS12150 a43543daf0d0d427a3401db43a10da77 167 SUPERFAMILY SSF117916 72 166 1.24E-31 T 20-04-2016 AMC99_RS12150 a43543daf0d0d427a3401db43a10da77 167 PANTHER PTHR13696:SF62 72 164 4.2E-23 T 20-04-2016 AMC99_RS12150 a43543daf0d0d427a3401db43a10da77 167 Pfam PF01883 Domain of unknown function DUF59 72 144 9.5E-22 T 20-04-2016 IPR002744 Domain of unknown function DUF59 AMC99_RS02430 4449ac9a5b15a500062bd60b367d2b24 156 PANTHER PTHR35011:SF2 5 144 1.5E-21 T 20-04-2016 AMC99_RS02430 4449ac9a5b15a500062bd60b367d2b24 156 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 20 144 2.1E-25 T 20-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AMC99_RS02430 4449ac9a5b15a500062bd60b367d2b24 156 PANTHER PTHR35011 5 144 1.5E-21 T 20-04-2016 AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 Gene3D G3DSA:3.90.700.10 237 343 3.6E-36 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 Gene3D G3DSA:3.50.50.60 2 236 7.1E-100 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 Gene3D G3DSA:3.50.50.60 344 404 7.1E-100 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 SUPERFAMILY SSF46977 420 521 1.26E-30 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 6 515 8.9E-171 T 20-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 PANTHER PTHR11632 1 528 5.2E-232 T 20-04-2016 AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 PANTHER PTHR11632:SF27 1 528 5.2E-232 T 20-04-2016 AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 SUPERFAMILY SSF51905 4 248 4.99E-73 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 SUPERFAMILY SSF51905 351 443 4.99E-73 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 Pfam PF02910 Fumarate reductase flavoprotein C-term 437 518 9.8E-14 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 SUPERFAMILY SSF56425 231 348 6.43E-37 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 Pfam PF00890 FAD binding domain 7 387 4.7E-95 T 20-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 7.5E-5 T 20-04-2016 AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 372 7.5E-5 T 20-04-2016 AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 Gene3D G3DSA:1.20.58.100 416 518 7.6E-32 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.4E-10 T 20-04-2016 AMC99_RS11185 52e4089b3ad738b8ed8358a132fca1e9 528 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 372 1.4E-10 T 20-04-2016 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 29 329 1.2E-114 T 20-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 Gene3D G3DSA:3.30.1360.10 181 232 1.0E-5 T 20-04-2016 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 Gene3D G3DSA:1.10.150.20 258 340 1.1E-36 T 20-04-2016 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 SUPERFAMILY SSF47789 262 338 5.49E-27 T 20-04-2016 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 269 340 7.0E-36 T 20-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 34 229 1.0E-22 T 20-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 SMART SM00662 28 235 6.2E-92 T 20-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 SUPERFAMILY SSF56553 58 179 1.96E-40 T 20-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 Gene3D G3DSA:3.30.1360.10 18 72 1.1E-9 T 20-04-2016 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 258 320 3.1E-25 T 20-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 SUPERFAMILY SSF55257 8 58 2.98E-30 T 20-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 SUPERFAMILY SSF55257 180 232 2.98E-30 T 20-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 64 159 1.2E-22 T 20-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 Gene3D G3DSA:2.170.120.12 73 178 7.6E-43 T 20-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 8 329 36.048 T 20-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 PANTHER PTHR32108 5 342 9.3E-136 T 20-04-2016 AMC99_RS07415 e25c19e76a8d48e70605e269dfe3275f 351 PANTHER PTHR32108:SF0 5 342 9.3E-136 T 20-04-2016 AMC99_RS10445 783432cae6fe57e71a1524c2923f2caa 240 Pfam PF01863 Protein of unknown function DUF45 36 231 5.0E-39 T 20-04-2016 IPR002725 Protein of unknown function DUF45 AMC99_RS10445 783432cae6fe57e71a1524c2923f2caa 240 PANTHER PTHR30399:SF3 14 235 5.6E-29 T 20-04-2016 AMC99_RS10445 783432cae6fe57e71a1524c2923f2caa 240 PANTHER PTHR30399 14 235 5.6E-29 T 20-04-2016 AMC99_RS01505 4b4b3997e07938b6ef60add53e81aa5b 203 PANTHER PTHR30173 10 168 9.1E-35 T 20-04-2016 AMC99_RS01505 4b4b3997e07938b6ef60add53e81aa5b 203 Pfam PF08281 Sigma-70, region 4 112 162 2.9E-14 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS01505 4b4b3997e07938b6ef60add53e81aa5b 203 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 165 2.2E-19 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS01505 4b4b3997e07938b6ef60add53e81aa5b 203 SUPERFAMILY SSF88946 11 99 4.4E-20 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS01505 4b4b3997e07938b6ef60add53e81aa5b 203 Gene3D G3DSA:1.10.10.10 109 168 9.5E-20 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01505 4b4b3997e07938b6ef60add53e81aa5b 203 Gene3D G3DSA:1.10.1740.10 9 84 9.3E-21 T 20-04-2016 AMC99_RS01505 4b4b3997e07938b6ef60add53e81aa5b 203 SUPERFAMILY SSF88659 109 167 6.98E-14 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS01505 4b4b3997e07938b6ef60add53e81aa5b 203 Pfam PF04542 Sigma-70 region 2 20 83 9.2E-16 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS01505 4b4b3997e07938b6ef60add53e81aa5b 203 PANTHER PTHR30173:SF6 10 168 9.1E-35 T 20-04-2016 AMC99_RS07100 3e1e7422fb4865b13d9c606cb5064db8 482 PANTHER PTHR11748:SF76 16 475 2.1E-159 T 20-04-2016 AMC99_RS07100 3e1e7422fb4865b13d9c606cb5064db8 482 SUPERFAMILY SSF56176 6 218 3.07E-64 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMC99_RS07100 3e1e7422fb4865b13d9c606cb5064db8 482 Pfam PF01565 FAD binding domain 44 180 3.3E-33 T 20-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMC99_RS07100 3e1e7422fb4865b13d9c606cb5064db8 482 SUPERFAMILY SSF55103 223 474 6.38E-54 T 20-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMC99_RS07100 3e1e7422fb4865b13d9c606cb5064db8 482 Gene3D G3DSA:1.10.45.10 433 472 7.0E-14 T 20-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMC99_RS07100 3e1e7422fb4865b13d9c606cb5064db8 482 PANTHER PTHR11748 16 475 2.1E-159 T 20-04-2016 AMC99_RS07100 3e1e7422fb4865b13d9c606cb5064db8 482 Pfam PF02913 FAD linked oxidases, C-terminal domain 221 472 1.6E-48 T 20-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AMC99_RS07100 3e1e7422fb4865b13d9c606cb5064db8 482 Gene3D G3DSA:3.30.43.10 6 98 3.0E-20 T 20-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMC99_RS07100 3e1e7422fb4865b13d9c606cb5064db8 482 Gene3D G3DSA:3.30.465.10 100 219 4.2E-34 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMC99_RS00015 e37ad4988658f868404bb99a90e7ea08 116 SUPERFAMILY SSF52833 1 114 6.92E-33 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS00015 e37ad4988658f868404bb99a90e7ea08 116 PANTHER PTHR30041 1 116 9.7E-39 T 20-04-2016 AMC99_RS00015 e37ad4988658f868404bb99a90e7ea08 116 Pfam PF03960 ArsC family 9 112 1.6E-15 T 20-04-2016 IPR006660 Arsenate reductase-like AMC99_RS00015 e37ad4988658f868404bb99a90e7ea08 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 112 7.1E-28 T 20-04-2016 IPR006504 Transcriptional regulator Spx/MgsR AMC99_RS00015 e37ad4988658f868404bb99a90e7ea08 116 PANTHER PTHR30041:SF3 1 116 9.7E-39 T 20-04-2016 AMC99_RS00015 e37ad4988658f868404bb99a90e7ea08 116 Gene3D G3DSA:3.40.30.10 1 115 2.2E-41 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS08860 f95158644870ba9a4c90f443658808bb 109 PIRSF PIRSF028291 1 108 1.4E-24 T 20-04-2016 IPR014543 Uncharacterised conserved protein UCP028291 AMC99_RS08860 f95158644870ba9a4c90f443658808bb 109 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 7 103 9.4E-32 T 20-04-2016 IPR014543 Uncharacterised conserved protein UCP028291 AMC99_RS01030 11a1da87301d34c257818b8d7594bf9a 351 PANTHER PTHR10366:SF186 6 349 1.4E-95 T 20-04-2016 AMC99_RS01030 11a1da87301d34c257818b8d7594bf9a 351 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 7 329 2.3E-124 T 20-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 AMC99_RS01030 11a1da87301d34c257818b8d7594bf9a 351 PANTHER PTHR10366 6 349 1.4E-95 T 20-04-2016 AMC99_RS01030 11a1da87301d34c257818b8d7594bf9a 351 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 257 3.9E-53 T 20-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMC99_RS01030 11a1da87301d34c257818b8d7594bf9a 351 Gene3D G3DSA:3.40.50.720 7 222 2.7E-72 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS01030 11a1da87301d34c257818b8d7594bf9a 351 Gene3D G3DSA:3.90.25.10 223 311 3.9E-10 T 20-04-2016 AMC99_RS01030 11a1da87301d34c257818b8d7594bf9a 351 SUPERFAMILY SSF51735 1 327 1.59E-81 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS00755 0d03cc7b7b4c4b7dd898d34f2e7d15a9 499 SUPERFAMILY SSF53720 2 483 7.85E-143 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMC99_RS00755 0d03cc7b7b4c4b7dd898d34f2e7d15a9 499 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 482 1.2E-199 T 20-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 AMC99_RS00755 0d03cc7b7b4c4b7dd898d34f2e7d15a9 499 Gene3D G3DSA:3.40.605.10 3 260 2.4E-83 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS00755 0d03cc7b7b4c4b7dd898d34f2e7d15a9 499 PANTHER PTHR11699 1 498 1.4E-244 T 20-04-2016 AMC99_RS00755 0d03cc7b7b4c4b7dd898d34f2e7d15a9 499 Gene3D G3DSA:3.40.309.10 261 443 1.1E-62 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMC99_RS00755 0d03cc7b7b4c4b7dd898d34f2e7d15a9 499 Pfam PF00171 Aldehyde dehydrogenase family 19 478 1.5E-134 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS00755 0d03cc7b7b4c4b7dd898d34f2e7d15a9 499 PANTHER PTHR11699:SF189 1 498 1.4E-244 T 20-04-2016 AMC99_RS08240 d14c7b720a12eecb36c2769fc1e8d085 514 PANTHER PTHR30332 234 512 2.2E-57 T 20-04-2016 AMC99_RS08240 d14c7b720a12eecb36c2769fc1e8d085 514 PRINTS PR00811 Bacterial general secretion pathway protein D signature 262 272 2.1E-12 T 20-04-2016 IPR001775 GspD/PilQ family AMC99_RS08240 d14c7b720a12eecb36c2769fc1e8d085 514 PRINTS PR00811 Bacterial general secretion pathway protein D signature 452 470 2.1E-12 T 20-04-2016 IPR001775 GspD/PilQ family AMC99_RS08240 d14c7b720a12eecb36c2769fc1e8d085 514 PRINTS PR00811 Bacterial general secretion pathway protein D signature 324 348 2.1E-12 T 20-04-2016 IPR001775 GspD/PilQ family AMC99_RS08240 d14c7b720a12eecb36c2769fc1e8d085 514 PRINTS PR00811 Bacterial general secretion pathway protein D signature 475 489 2.1E-12 T 20-04-2016 IPR001775 GspD/PilQ family AMC99_RS08240 d14c7b720a12eecb36c2769fc1e8d085 514 Pfam PF00263 Bacterial type II and III secretion system protein 329 488 4.9E-45 T 20-04-2016 IPR004846 Type II/III secretion system GO:0009306 AMC99_RS08240 d14c7b720a12eecb36c2769fc1e8d085 514 Pfam PF03958 Bacterial type II/III secretion system short domain 166 265 1.1E-7 T 20-04-2016 IPR005644 NolW-like AMC99_RS07200 d151e43e0089f16ee4afdfc74b2d941e 415 PANTHER PTHR30544 201 409 1.6E-164 T 20-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS07200 d151e43e0089f16ee4afdfc74b2d941e 415 PANTHER PTHR30544 29 178 1.6E-164 T 20-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS07200 d151e43e0089f16ee4afdfc74b2d941e 415 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 27 397 4.0E-118 T 20-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS07200 d151e43e0089f16ee4afdfc74b2d941e 415 PIRSF PIRSF006004 23 411 3.0E-137 T 20-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS07200 d151e43e0089f16ee4afdfc74b2d941e 415 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 29 397 72.114 T 20-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS07200 d151e43e0089f16ee4afdfc74b2d941e 415 SUPERFAMILY SSF102114 127 351 1.57E-10 T 20-04-2016 AMC99_RS07200 d151e43e0089f16ee4afdfc74b2d941e 415 Gene3D G3DSA:3.20.20.70 134 391 2.9E-13 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS07200 d151e43e0089f16ee4afdfc74b2d941e 415 Pfam PF04055 Radical SAM superfamily 137 322 2.3E-14 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_RS07200 d151e43e0089f16ee4afdfc74b2d941e 415 PANTHER PTHR30544:SF5 201 409 1.6E-164 T 20-04-2016 AMC99_RS07200 d151e43e0089f16ee4afdfc74b2d941e 415 PANTHER PTHR30544:SF5 29 178 1.6E-164 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PANTHER PTHR22912:SF106 2 449 1.7E-182 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 SUPERFAMILY SSF51905 3 365 1.38E-50 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 Gene3D G3DSA:3.30.390.30 340 448 8.6E-43 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 Gene3D G3DSA:3.50.50.60 144 271 2.0E-31 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PIRSF PIRSF000350 1 449 4.4E-86 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 319 1.9E-68 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 20-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 Gene3D G3DSA:3.50.50.60 272 330 3.8E-67 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 Gene3D G3DSA:3.50.50.60 4 143 3.8E-67 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PANTHER PTHR22912 2 449 1.7E-182 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.4E-29 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 2.4E-29 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 2.4E-29 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 2.4E-29 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 271 2.4E-29 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 448 2.1E-33 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 6.7E-67 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 6.7E-67 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 6.7E-67 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 270 6.7E-67 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 6.7E-67 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 6.7E-67 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 6.7E-67 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 6.7E-67 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 6.7E-67 T 20-04-2016 AMC99_RS04450 8f2356628cc62cc96abb430ee9f79534 449 SUPERFAMILY SSF55424 336 448 1.62E-34 T 20-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMC99_RS10510 10f3c3231756c934fcba628335d7e9a0 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 1.3E-10 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS10510 10f3c3231756c934fcba628335d7e9a0 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 1.3E-10 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS10510 10f3c3231756c934fcba628335d7e9a0 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 1.3E-10 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS10510 10f3c3231756c934fcba628335d7e9a0 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 1.3E-10 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS10510 10f3c3231756c934fcba628335d7e9a0 156 Gene3D G3DSA:1.10.10.10 12 150 1.1E-26 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS10510 10f3c3231756c934fcba628335d7e9a0 156 SUPERFAMILY SSF46785 12 150 1.08E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS10510 10f3c3231756c934fcba628335d7e9a0 156 SMART SM00347 34 134 6.8E-14 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS10510 10f3c3231756c934fcba628335d7e9a0 156 PANTHER PTHR33164 16 152 6.2E-21 T 20-04-2016 AMC99_RS10510 10f3c3231756c934fcba628335d7e9a0 156 Pfam PF12802 MarR family 40 98 9.1E-12 T 20-04-2016 AMC99_RS10510 10f3c3231756c934fcba628335d7e9a0 156 PANTHER PTHR33164:SF16 16 152 6.2E-21 T 20-04-2016 AMC99_RS01750 1796eaecda29da98370a23e5edb2bd99 248 PANTHER PTHR10422 26 163 2.8E-76 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS01750 1796eaecda29da98370a23e5edb2bd99 248 Gene3D G3DSA:1.10.760.10 20 228 1.2E-33 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS01750 1796eaecda29da98370a23e5edb2bd99 248 PANTHER PTHR10422:SF23 26 163 2.8E-76 T 20-04-2016 AMC99_RS01750 1796eaecda29da98370a23e5edb2bd99 248 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 7 231 8.7E-97 T 20-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AMC99_RS01750 1796eaecda29da98370a23e5edb2bd99 248 SUPERFAMILY SSF46626 17 173 2.98E-27 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS01750 1796eaecda29da98370a23e5edb2bd99 248 SUPERFAMILY SSF46626 216 227 2.98E-27 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS01750 1796eaecda29da98370a23e5edb2bd99 248 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 8 234 3.6E-109 T 20-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AMC99_RS00760 7be7cf805f86316c9ab1d25cde9bb6f1 291 Gene3D G3DSA:1.10.1040.10 162 290 2.6E-47 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMC99_RS00760 7be7cf805f86316c9ab1d25cde9bb6f1 291 SUPERFAMILY SSF51735 1 159 1.4E-42 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS00760 7be7cf805f86316c9ab1d25cde9bb6f1 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 20-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 AMC99_RS00760 7be7cf805f86316c9ab1d25cde9bb6f1 291 PANTHER PTHR22981 1 290 6.3E-107 T 20-04-2016 AMC99_RS00760 7be7cf805f86316c9ab1d25cde9bb6f1 291 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 5 290 6.5E-120 T 20-04-2016 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|UniPathway: UPA00362 AMC99_RS00760 7be7cf805f86316c9ab1d25cde9bb6f1 291 SUPERFAMILY SSF48179 160 290 3.23E-42 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMC99_RS00760 7be7cf805f86316c9ab1d25cde9bb6f1 291 Gene3D G3DSA:3.40.50.720 1 161 3.8E-52 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS00760 7be7cf805f86316c9ab1d25cde9bb6f1 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 159 4.0E-46 T 20-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AMC99_RS00760 7be7cf805f86316c9ab1d25cde9bb6f1 291 PIRSF PIRSF000103 1 291 2.3E-80 T 20-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 AMC99_RS00760 7be7cf805f86316c9ab1d25cde9bb6f1 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 162 289 4.4E-39 T 20-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 6.97E-45 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.97E-45 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 6.97E-45 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 6.97E-45 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 6.97E-45 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 6.97E-45 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 PANTHER PTHR24322 47 143 4.2E-57 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 PANTHER PTHR24322 159 191 4.2E-57 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 PANTHER PTHR24322 11 30 4.2E-57 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 PANTHER PTHR24322:SF328 47 143 4.2E-57 T 20-04-2016 AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 PANTHER PTHR24322:SF328 159 191 4.2E-57 T 20-04-2016 AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 PANTHER PTHR24322:SF328 11 30 4.2E-57 T 20-04-2016 AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 195 6.4E-4 T 20-04-2016 AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.47E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.47E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.47E-14 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 250 1.9E-97 T 20-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 Gene3D G3DSA:3.40.50.720 1 251 2.5E-87 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 SUPERFAMILY SSF51735 5 251 1.65E-84 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06760 667b2a98928066fc6ade6666204707ac 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 249 3.1E-66 T 20-04-2016 AMC99_RS13475 d5ddd6b969d80351ebb587fed2dd9b7b 755 SUPERFAMILY SSF53659 435 751 5.76E-73 T 20-04-2016 AMC99_RS13475 d5ddd6b969d80351ebb587fed2dd9b7b 755 Pfam PF00390 Malic enzyme, N-terminal domain 25 157 9.0E-25 T 20-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMC99_RS13475 d5ddd6b969d80351ebb587fed2dd9b7b 755 SUPERFAMILY SSF53223 15 167 2.01E-51 T 20-04-2016 AMC99_RS13475 d5ddd6b969d80351ebb587fed2dd9b7b 755 Gene3D G3DSA:3.40.50.10750 582 726 4.4E-44 T 20-04-2016 AMC99_RS13475 d5ddd6b969d80351ebb587fed2dd9b7b 755 PIRSF PIRSF036684 7 754 0.0 T 20-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AMC99_RS13475 d5ddd6b969d80351ebb587fed2dd9b7b 755 PANTHER PTHR23406 13 459 4.8E-162 T 20-04-2016 AMC99_RS13475 d5ddd6b969d80351ebb587fed2dd9b7b 755 PANTHER PTHR23406:SF23 13 459 4.8E-162 T 20-04-2016 AMC99_RS13475 d5ddd6b969d80351ebb587fed2dd9b7b 755 SUPERFAMILY SSF51735 169 455 1.1E-86 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS13475 d5ddd6b969d80351ebb587fed2dd9b7b 755 Gene3D G3DSA:3.40.50.720 167 452 2.6E-87 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS13475 d5ddd6b969d80351ebb587fed2dd9b7b 755 Gene3D G3DSA:3.40.50.10380 14 166 6.4E-49 T 20-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMC99_RS13475 d5ddd6b969d80351ebb587fed2dd9b7b 755 Pfam PF01515 Phosphate acetyl/butaryl transferase 435 750 2.1E-73 T 20-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 AMC99_RS13475 d5ddd6b969d80351ebb587fed2dd9b7b 755 SMART SM01274 24 157 2.9E-78 T 20-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMC99_RS13475 d5ddd6b969d80351ebb587fed2dd9b7b 755 Pfam PF03949 Malic enzyme, NAD binding domain 171 365 1.6E-20 T 20-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AMC99_RS13475 d5ddd6b969d80351ebb587fed2dd9b7b 755 SMART SM00919 169 404 2.3E-142 T 20-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AMC99_RS13475 d5ddd6b969d80351ebb587fed2dd9b7b 755 ProSitePatterns PS00331 Malic enzymes signature. 165 181 - T 20-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AMC99_RS03810 4eae0d005689e4ffb27fd9de643ee533 404 PANTHER PTHR22976:SF7 74 386 1.5E-69 T 20-04-2016 AMC99_RS03810 4eae0d005689e4ffb27fd9de643ee533 404 SUPERFAMILY SSF102114 65 310 2.22E-25 T 20-04-2016 AMC99_RS03810 4eae0d005689e4ffb27fd9de643ee533 404 Pfam PF04055 Radical SAM superfamily 80 254 1.5E-11 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_RS03810 4eae0d005689e4ffb27fd9de643ee533 404 SMART SM00729 73 299 1.0E-12 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMC99_RS03810 4eae0d005689e4ffb27fd9de643ee533 404 Gene3D G3DSA:3.20.20.70 71 308 1.7E-20 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS03810 4eae0d005689e4ffb27fd9de643ee533 404 PANTHER PTHR22976 74 386 1.5E-69 T 20-04-2016 AMC99_RS05040 805b96423a28db7a3b45997eee1f0bfd 144 Gene3D G3DSA:3.10.129.10 10 128 1.9E-27 T 20-04-2016 IPR029069 HotDog domain AMC99_RS05040 805b96423a28db7a3b45997eee1f0bfd 144 Pfam PF03061 Thioesterase superfamily 43 119 3.3E-14 T 20-04-2016 IPR006683 Thioesterase domain AMC99_RS05040 805b96423a28db7a3b45997eee1f0bfd 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 12 126 8.3E-13 T 20-04-2016 IPR003736 Phenylacetic acid degradation-related domain AMC99_RS05040 805b96423a28db7a3b45997eee1f0bfd 144 SUPERFAMILY SSF54637 23 125 4.79E-26 T 20-04-2016 IPR029069 HotDog domain AMC99_RS05040 805b96423a28db7a3b45997eee1f0bfd 144 PANTHER PTHR12418 12 144 5.5E-17 T 20-04-2016 AMC99_RS09765 d796bf8895b7cf3ce1540b968261ab81 423 SUPERFAMILY SSF52540 62 401 3.6E-77 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09765 d796bf8895b7cf3ce1540b968261ab81 423 PANTHER PTHR11262 5 408 9.0E-248 T 20-04-2016 AMC99_RS09765 d796bf8895b7cf3ce1540b968261ab81 423 SMART SM00994 12 51 8.3E-25 T 20-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AMC99_RS09765 d796bf8895b7cf3ce1540b968261ab81 423 SMART SM00382 111 336 1.6E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS09765 d796bf8895b7cf3ce1540b968261ab81 423 Gene3D G3DSA:3.40.50.300 292 309 6.5E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09765 d796bf8895b7cf3ce1540b968261ab81 423 Gene3D G3DSA:3.40.50.300 65 253 6.5E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09765 d796bf8895b7cf3ce1540b968261ab81 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 309 3.4E-50 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_RS09765 d796bf8895b7cf3ce1540b968261ab81 423 Gene3D G3DSA:1.10.8.60 315 410 9.5E-36 T 20-04-2016 AMC99_RS09765 d796bf8895b7cf3ce1540b968261ab81 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 315 386 3.8E-15 T 20-04-2016 IPR019489 Clp ATPase, C-terminal AMC99_RS09765 d796bf8895b7cf3ce1540b968261ab81 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 413 52.62 T 20-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMC99_RS09765 d796bf8895b7cf3ce1540b968261ab81 423 SMART SM01086 315 410 4.7E-33 T 20-04-2016 IPR019489 Clp ATPase, C-terminal AMC99_RS09765 d796bf8895b7cf3ce1540b968261ab81 423 Pfam PF06689 ClpX C4-type zinc finger 13 50 6.3E-21 T 20-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AMC99_RS09765 d796bf8895b7cf3ce1540b968261ab81 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 407 5.8E-198 T 20-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMC99_RS09765 d796bf8895b7cf3ce1540b968261ab81 423 SUPERFAMILY SSF57716 13 48 1.1E-11 T 20-04-2016 AMC99_RS02410 5f02957650424e67d946fc0203d63244 915 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 177 8.1E-17 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS02410 5f02957650424e67d946fc0203d63244 915 Gene3D G3DSA:2.40.170.20 281 326 3.4E-56 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02410 5f02957650424e67d946fc0203d63244 915 Gene3D G3DSA:2.40.170.20 546 913 3.4E-56 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02410 5f02957650424e67d946fc0203d63244 915 Gene3D G3DSA:2.40.170.20 180 246 3.4E-56 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02410 5f02957650424e67d946fc0203d63244 915 Gene3D G3DSA:2.40.170.20 369 491 3.4E-56 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02410 5f02957650424e67d946fc0203d63244 915 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 50 914 4.9E-179 T 20-04-2016 IPR010104 Bacterial TonB-dependent receptor AMC99_RS02410 5f02957650424e67d946fc0203d63244 915 Gene3D G3DSA:2.170.130.10 66 179 1.7E-17 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS02410 5f02957650424e67d946fc0203d63244 915 PANTHER PTHR40980:SF1 47 912 2.4E-70 T 20-04-2016 AMC99_RS02410 5f02957650424e67d946fc0203d63244 915 PANTHER PTHR40980 47 912 2.4E-70 T 20-04-2016 AMC99_RS02410 5f02957650424e67d946fc0203d63244 915 SUPERFAMILY SSF56935 292 496 3.36E-85 T 20-04-2016 AMC99_RS02410 5f02957650424e67d946fc0203d63244 915 SUPERFAMILY SSF56935 747 913 3.36E-85 T 20-04-2016 AMC99_RS02410 5f02957650424e67d946fc0203d63244 915 SUPERFAMILY SSF56935 543 712 3.36E-85 T 20-04-2016 AMC99_RS02410 5f02957650424e67d946fc0203d63244 915 SUPERFAMILY SSF56935 46 244 3.36E-85 T 20-04-2016 AMC99_RS02410 5f02957650424e67d946fc0203d63244 915 Pfam PF00593 TonB dependent receptor 623 913 1.1E-25 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS11410 de16fa17883d128d81748ddc75882fad 207 SUPERFAMILY SSF47473 32 111 1.88E-12 T 20-04-2016 IPR011992 EF-hand domain pair AMC99_RS11410 de16fa17883d128d81748ddc75882fad 207 SUPERFAMILY SSF47473 144 163 1.88E-12 T 20-04-2016 IPR011992 EF-hand domain pair AMC99_RS11410 de16fa17883d128d81748ddc75882fad 207 Gene3D G3DSA:1.10.238.10 32 153 8.1E-9 T 20-04-2016 IPR011992 EF-hand domain pair AMC99_RS11410 de16fa17883d128d81748ddc75882fad 207 Pfam PF13202 EF hand 77 93 0.031 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 AMC99_RS11410 de16fa17883d128d81748ddc75882fad 207 Pfam PF13202 EF hand 51 65 0.053 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 AMC99_RS11410 de16fa17883d128d81748ddc75882fad 207 Pfam PF13202 EF hand 168 185 1.3E-4 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 AMC99_RS11410 de16fa17883d128d81748ddc75882fad 207 Gene3D G3DSA:1.10.238.10 154 186 8.8E-6 T 20-04-2016 IPR011992 EF-hand domain pair AMC99_RS11410 de16fa17883d128d81748ddc75882fad 207 ProSitePatterns PS00018 EF-hand calcium-binding domain. 173 185 - T 20-04-2016 IPR018247 EF-Hand 1, calcium-binding site AMC99_RS11410 de16fa17883d128d81748ddc75882fad 207 ProSitePatterns PS00018 EF-hand calcium-binding domain. 81 93 - T 20-04-2016 IPR018247 EF-Hand 1, calcium-binding site AMC99_RS11410 de16fa17883d128d81748ddc75882fad 207 ProSitePatterns PS00018 EF-hand calcium-binding domain. 149 161 - T 20-04-2016 IPR018247 EF-Hand 1, calcium-binding site AMC99_RS02015 9580f0d357876262f5d9c71cda3f53a3 425 PANTHER PTHR10443 325 421 1.2E-169 T 20-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 AMC99_RS02015 9580f0d357876262f5d9c71cda3f53a3 425 PANTHER PTHR10443 25 285 1.2E-169 T 20-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 AMC99_RS02015 9580f0d357876262f5d9c71cda3f53a3 425 PANTHER PTHR10443:SF12 325 421 1.2E-169 T 20-04-2016 AMC99_RS02015 9580f0d357876262f5d9c71cda3f53a3 425 PANTHER PTHR10443:SF12 25 285 1.2E-169 T 20-04-2016 AMC99_RS02015 9580f0d357876262f5d9c71cda3f53a3 425 SUPERFAMILY SSF51556 30 285 2.24E-101 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS02015 9580f0d357876262f5d9c71cda3f53a3 425 SUPERFAMILY SSF51556 325 411 2.24E-101 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS02015 9580f0d357876262f5d9c71cda3f53a3 425 Gene3D G3DSA:3.20.20.140 29 416 1.7E-145 T 20-04-2016 AMC99_RS02015 9580f0d357876262f5d9c71cda3f53a3 425 ProSitePatterns PS00869 Renal dipeptidase active site. 157 179 - T 20-04-2016 IPR000180 Membrane dipeptidase, active site GO:0006508|GO:0008235|GO:0008239|GO:0016805 MetaCyc: PWY-7533 AMC99_RS02015 9580f0d357876262f5d9c71cda3f53a3 425 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 37 403 3.0E-112 T 20-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 AMC99_RS11910 158dc9f791c7e074f767532ca5772a4c 529 SUPERFAMILY SSF53927 214 529 1.81E-123 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMC99_RS11910 158dc9f791c7e074f767532ca5772a4c 529 SUPERFAMILY SSF52335 6 195 2.59E-69 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain AMC99_RS11910 158dc9f791c7e074f767532ca5772a4c 529 PANTHER PTHR11692 4 529 3.4E-287 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMC99_RS11910 158dc9f791c7e074f767532ca5772a4c 529 PIRSF PIRSF000414 1 529 1.1E-208 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMC99_RS11910 158dc9f791c7e074f767532ca5772a4c 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 138 453 1.5E-112 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMC99_RS11910 158dc9f791c7e074f767532ca5772a4c 529 Gene3D G3DSA:3.40.140.20 374 519 6.7E-55 T 20-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMC99_RS11910 158dc9f791c7e074f767532ca5772a4c 529 SMART SM00798 137 454 3.4E-193 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMC99_RS11910 158dc9f791c7e074f767532ca5772a4c 529 Pfam PF02142 MGS-like domain 18 131 3.9E-26 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain AMC99_RS11910 158dc9f791c7e074f767532ca5772a4c 529 SMART SM00851 18 132 1.4E-57 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain AMC99_RS11910 158dc9f791c7e074f767532ca5772a4c 529 Gene3D G3DSA:3.40.50.1380 5 190 2.5E-83 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain AMC99_RS11910 158dc9f791c7e074f767532ca5772a4c 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 7 529 7.1E-200 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMC99_RS11910 158dc9f791c7e074f767532ca5772a4c 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 6 529 43.571 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMC99_RS11910 158dc9f791c7e074f767532ca5772a4c 529 PANTHER PTHR11692:SF2 4 529 3.4E-287 T 20-04-2016 AMC99_RS11910 158dc9f791c7e074f767532ca5772a4c 529 Gene3D G3DSA:3.40.140.20 244 361 1.7E-44 T 20-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMC99_RS12805 a81f1d8bd18e03d62f8a9e674179e98c 257 PIRSF PIRSF016184 4 257 3.0E-34 T 20-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- AMC99_RS12805 a81f1d8bd18e03d62f8a9e674179e98c 257 Gene3D G3DSA:3.10.310.10 123 249 6.1E-28 T 20-04-2016 AMC99_RS12805 a81f1d8bd18e03d62f8a9e674179e98c 257 PANTHER PTHR13774 9 251 1.4E-47 T 20-04-2016 AMC99_RS12805 a81f1d8bd18e03d62f8a9e674179e98c 257 SUPERFAMILY SSF54506 9 252 5.23E-52 T 20-04-2016 AMC99_RS12805 a81f1d8bd18e03d62f8a9e674179e98c 257 Gene3D G3DSA:3.10.310.10 9 110 8.0E-24 T 20-04-2016 AMC99_RS12805 a81f1d8bd18e03d62f8a9e674179e98c 257 Pfam PF02567 Phenazine biosynthesis-like protein 10 236 3.3E-31 T 20-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- AMC99_RS05885 67921b42eb555122b1eefdde3cc2dc0e 361 Pfam PF00676 Dehydrogenase E1 component 52 349 4.5E-104 T 20-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 AMC99_RS05885 67921b42eb555122b1eefdde3cc2dc0e 361 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 44 357 1.7E-149 T 20-04-2016 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AMC99_RS05885 67921b42eb555122b1eefdde3cc2dc0e 361 SUPERFAMILY SSF52518 30 359 1.2E-102 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS05885 67921b42eb555122b1eefdde3cc2dc0e 361 PANTHER PTHR11516:SF40 42 361 4.2E-174 T 20-04-2016 AMC99_RS05885 67921b42eb555122b1eefdde3cc2dc0e 361 PANTHER PTHR11516 42 361 4.2E-174 T 20-04-2016 AMC99_RS05885 67921b42eb555122b1eefdde3cc2dc0e 361 Gene3D G3DSA:3.40.50.970 31 359 6.8E-133 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS10560 117e56db3559ed46c1a27f3739dec50d 422 Pfam PF07804 HipA-like C-terminal domain 241 386 1.5E-31 T 20-04-2016 IPR012893 HipA-like, C-terminal AMC99_RS10560 117e56db3559ed46c1a27f3739dec50d 422 PANTHER PTHR37419:SF3 1 342 4.4E-56 T 20-04-2016 AMC99_RS10560 117e56db3559ed46c1a27f3739dec50d 422 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 8 106 3.3E-22 T 20-04-2016 IPR017508 HipA, N-terminal subdomain 1 AMC99_RS10560 117e56db3559ed46c1a27f3739dec50d 422 Pfam PF07805 HipA-like N-terminal domain 152 232 2.5E-19 T 20-04-2016 IPR012894 HipA, N-terminal subdomain 2 AMC99_RS10560 117e56db3559ed46c1a27f3739dec50d 422 Pfam PF13657 HipA N-terminal domain 9 106 4.3E-21 T 20-04-2016 IPR017508 HipA, N-terminal subdomain 1 AMC99_RS10560 117e56db3559ed46c1a27f3739dec50d 422 PANTHER PTHR37419 1 342 4.4E-56 T 20-04-2016 AMC99_RS04295 8a5643a06056cf0058f7507a5fecc03c 156 SMART SM00448 2 115 1.1E-28 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS04295 8a5643a06056cf0058f7507a5fecc03c 156 PANTHER PTHR26402 2 126 9.6E-33 T 20-04-2016 AMC99_RS04295 8a5643a06056cf0058f7507a5fecc03c 156 Gene3D G3DSA:3.40.50.2300 2 138 7.4E-35 T 20-04-2016 AMC99_RS04295 8a5643a06056cf0058f7507a5fecc03c 156 Pfam PF00072 Response regulator receiver domain 4 115 1.8E-24 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS04295 8a5643a06056cf0058f7507a5fecc03c 156 SUPERFAMILY SSF52172 1 136 1.57E-34 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS09780 6a378b4f2afa715255e031b0c3fa5c34 511 SUPERFAMILY SSF75304 40 497 2.88E-110 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS09780 6a378b4f2afa715255e031b0c3fa5c34 511 Pfam PF01425 Amidase 51 484 4.3E-90 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS09780 6a378b4f2afa715255e031b0c3fa5c34 511 PANTHER PTHR11895 51 501 1.4E-143 T 20-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS09780 6a378b4f2afa715255e031b0c3fa5c34 511 Gene3D G3DSA:3.90.1300.10 26 498 1.1E-129 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_RS09780 6a378b4f2afa715255e031b0c3fa5c34 511 PANTHER PTHR11895:SF8 51 501 1.4E-143 T 20-04-2016 AMC99_RS11120 e0a9ddd874840bd706bf778dd407806c 299 Hamap MF_00082_B Acetylglutamate kinase [argB]. 27 298 36.052 T 20-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS11120 e0a9ddd874840bd706bf778dd407806c 299 PRINTS PR00474 Glutamate 5-kinase family signature 198 225 3.4E-8 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS11120 e0a9ddd874840bd706bf778dd407806c 299 PRINTS PR00474 Glutamate 5-kinase family signature 248 268 3.4E-8 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS11120 e0a9ddd874840bd706bf778dd407806c 299 PRINTS PR00474 Glutamate 5-kinase family signature 60 74 3.4E-8 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMC99_RS11120 e0a9ddd874840bd706bf778dd407806c 299 Gene3D G3DSA:3.40.1160.10 28 297 5.8E-102 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMC99_RS11120 e0a9ddd874840bd706bf778dd407806c 299 PANTHER PTHR23342 9 299 4.7E-111 T 20-04-2016 AMC99_RS11120 e0a9ddd874840bd706bf778dd407806c 299 Pfam PF00696 Amino acid kinase family 30 272 1.2E-45 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMC99_RS11120 e0a9ddd874840bd706bf778dd407806c 299 SUPERFAMILY SSF53633 10 298 3.53E-92 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMC99_RS11120 e0a9ddd874840bd706bf778dd407806c 299 PIRSF PIRSF000728 14 298 3.0E-107 T 20-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS11120 e0a9ddd874840bd706bf778dd407806c 299 TIGRFAM TIGR00761 argB: acetylglutamate kinase 30 273 1.5E-75 T 20-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMC99_RS04970 77531238a954d652eb669369ba38e292 416 SUPERFAMILY SSF161098 189 403 9.94E-37 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMC99_RS04970 77531238a954d652eb669369ba38e292 416 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 213 411 1.0E-22 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMC99_RS04970 77531238a954d652eb669369ba38e292 416 PANTHER PTHR30425:SF2 7 57 8.3E-90 T 20-04-2016 AMC99_RS04970 77531238a954d652eb669369ba38e292 416 PANTHER PTHR30425:SF2 174 415 8.3E-90 T 20-04-2016 AMC99_RS04970 77531238a954d652eb669369ba38e292 416 Pfam PF11812 Domain of unknown function (DUF3333) 14 160 2.0E-29 T 20-04-2016 IPR024573 Domain of unknown function DUF3333 AMC99_RS04970 77531238a954d652eb669369ba38e292 416 Gene3D G3DSA:1.10.3720.10 177 415 1.8E-45 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMC99_RS04970 77531238a954d652eb669369ba38e292 416 Gene3D G3DSA:1.10.3720.10 26 53 1.8E-45 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMC99_RS04970 77531238a954d652eb669369ba38e292 416 PANTHER PTHR30425 7 57 8.3E-90 T 20-04-2016 AMC99_RS04970 77531238a954d652eb669369ba38e292 416 PANTHER PTHR30425 174 415 8.3E-90 T 20-04-2016 AMC99_RS04970 77531238a954d652eb669369ba38e292 416 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 175 413 2.7E-64 T 20-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AMC99_RS02845 a4baa77b08652927b872ddb1c714887f 176 Gene3D G3DSA:3.40.630.30 2 163 5.2E-36 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS02845 a4baa77b08652927b872ddb1c714887f 176 Pfam PF13302 Acetyltransferase (GNAT) domain 7 139 3.7E-27 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS02845 a4baa77b08652927b872ddb1c714887f 176 SUPERFAMILY SSF55729 3 145 6.05E-33 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS02845 a4baa77b08652927b872ddb1c714887f 176 PANTHER PTHR13256 4 145 6.5E-30 T 20-04-2016 AMC99_RS01645 23dd5f10e3292e4a4c2e6959ecf95430 367 Gene3D G3DSA:2.40.30.110 281 354 9.9E-30 T 20-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMC99_RS01645 23dd5f10e3292e4a4c2e6959ecf95430 367 Gene3D G3DSA:3.30.1360.120 142 232 8.1E-52 T 20-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMC99_RS01645 23dd5f10e3292e4a4c2e6959ecf95430 367 Gene3D G3DSA:3.30.1360.120 3 54 8.1E-52 T 20-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMC99_RS01645 23dd5f10e3292e4a4c2e6959ecf95430 367 Gene3D G3DSA:3.30.70.1400 55 140 5.3E-27 T 20-04-2016 AMC99_RS01645 23dd5f10e3292e4a4c2e6959ecf95430 367 PIRSF PIRSF006487 2 365 3.3E-83 T 20-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMC99_RS01645 23dd5f10e3292e4a4c2e6959ecf95430 367 SUPERFAMILY SSF103025 5 280 1.07E-84 T 20-04-2016 AMC99_RS01645 23dd5f10e3292e4a4c2e6959ecf95430 367 PANTHER PTHR13847:SF209 7 359 3.1E-118 T 20-04-2016 AMC99_RS01645 23dd5f10e3292e4a4c2e6959ecf95430 367 SUPERFAMILY SSF101790 282 365 7.19E-28 T 20-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AMC99_RS01645 23dd5f10e3292e4a4c2e6959ecf95430 367 Pfam PF01571 Aminomethyltransferase folate-binding domain 8 252 2.0E-84 T 20-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal AMC99_RS01645 23dd5f10e3292e4a4c2e6959ecf95430 367 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 264 355 6.2E-26 T 20-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMC99_RS01645 23dd5f10e3292e4a4c2e6959ecf95430 367 PANTHER PTHR13847 7 359 3.1E-118 T 20-04-2016 AMC99_RS01645 23dd5f10e3292e4a4c2e6959ecf95430 367 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 5 360 8.9E-103 T 20-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMC99_RS12710 c058df8b9f85d567949ca43c5058c8c0 403 Gene3D G3DSA:3.30.470.20 215 325 3.7E-15 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMC99_RS12710 c058df8b9f85d567949ca43c5058c8c0 403 Gene3D G3DSA:3.30.1490.20 116 203 1.0E-5 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS12710 c058df8b9f85d567949ca43c5058c8c0 403 SUPERFAMILY SSF56059 119 318 2.29E-22 T 20-04-2016 AMC99_RS03880 ba521e6ddcb0485b97f8f495d32fcb60 151 Pfam PF01575 MaoC like domain 11 120 2.0E-22 T 20-04-2016 IPR002539 MaoC-like domain AMC99_RS03880 ba521e6ddcb0485b97f8f495d32fcb60 151 SUPERFAMILY SSF54637 1 149 7.76E-47 T 20-04-2016 IPR029069 HotDog domain AMC99_RS03880 ba521e6ddcb0485b97f8f495d32fcb60 151 PANTHER PTHR13078 1 149 6.8E-67 T 20-04-2016 AMC99_RS03880 ba521e6ddcb0485b97f8f495d32fcb60 151 Gene3D G3DSA:3.10.129.10 2 149 2.5E-47 T 20-04-2016 IPR029069 HotDog domain AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 PANTHER PTHR22912:SF48 7 305 1.1E-38 T 20-04-2016 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 PANTHER PTHR22912 7 305 1.1E-38 T 20-04-2016 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 SUPERFAMILY SSF51905 7 158 1.77E-37 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 SUPERFAMILY SSF51905 228 299 1.77E-37 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 SUPERFAMILY SSF51905 133 230 2.33E-7 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 Gene3D G3DSA:3.50.50.60 6 118 3.9E-24 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 Gene3D G3DSA:3.50.50.60 127 221 2.7E-16 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 Gene3D G3DSA:3.50.50.60 234 300 1.5E-16 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 1.2E-25 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 59 69 1.2E-25 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 1.2E-25 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 1.2E-25 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 104 112 1.2E-25 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 2.3E-22 T 20-04-2016 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 252 274 2.3E-22 T 20-04-2016 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.3E-22 T 20-04-2016 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 2.3E-22 T 20-04-2016 AMC99_RS06900 faa34a4596d69f179d12b80da1ac0170 306 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 287 2.8E-29 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 SUPERFAMILY SSF47384 131 186 1.31E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 232 351 1.0E-18 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 PANTHER PTHR24423 11 353 1.9E-56 T 20-04-2016 AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 186 1.2E-10 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 Pfam PF00989 PAS fold 16 62 2.1E-5 T 20-04-2016 IPR013767 PAS fold GO:0006355 AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 2.9E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 310 2.9E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 2.9E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 SUPERFAMILY SSF55785 17 100 9.07E-8 T 20-04-2016 IPR000014 PAS domain AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 SMART SM00388 125 189 2.8E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 SUPERFAMILY SSF55874 186 350 1.57E-31 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 PANTHER PTHR24423:SF520 11 353 1.9E-56 T 20-04-2016 AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 Gene3D G3DSA:3.30.450.20 17 109 6.1E-12 T 20-04-2016 AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 SMART SM00387 229 352 2.9E-31 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 Gene3D G3DSA:3.30.565.10 192 351 2.2E-33 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS05790 7a9ec4a79f597b2a42a89c262644a4d6 357 Gene3D G3DSA:1.10.287.130 133 183 4.9E-7 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS05685 1521eaded07335fd1b6889ef8f25e7fd 432 Gene3D G3DSA:2.40.50.100 1 97 1.7E-35 T 20-04-2016 AMC99_RS05685 1521eaded07335fd1b6889ef8f25e7fd 432 Gene3D G3DSA:4.10.320.10 125 173 1.4E-18 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMC99_RS05685 1521eaded07335fd1b6889ef8f25e7fd 432 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 206 431 5.0E-79 T 20-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 AMC99_RS05685 1521eaded07335fd1b6889ef8f25e7fd 432 PANTHER PTHR23151:SF9 4 431 1.0E-194 T 20-04-2016 AMC99_RS05685 1521eaded07335fd1b6889ef8f25e7fd 432 SUPERFAMILY SSF47005 129 172 4.84E-12 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMC99_RS05685 1521eaded07335fd1b6889ef8f25e7fd 432 Pfam PF00364 Biotin-requiring enzyme 4 77 3.3E-22 T 20-04-2016 IPR000089 Biotin/lipoyl attachment AMC99_RS05685 1521eaded07335fd1b6889ef8f25e7fd 432 Pfam PF02817 e3 binding domain 135 170 1.2E-16 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMC99_RS05685 1521eaded07335fd1b6889ef8f25e7fd 432 Gene3D G3DSA:3.30.559.10 205 431 4.7E-86 T 20-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain AMC99_RS05685 1521eaded07335fd1b6889ef8f25e7fd 432 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 20-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMC99_RS05685 1521eaded07335fd1b6889ef8f25e7fd 432 SUPERFAMILY SSF52777 205 431 3.65E-79 T 20-04-2016 AMC99_RS05685 1521eaded07335fd1b6889ef8f25e7fd 432 PANTHER PTHR23151 4 431 1.0E-194 T 20-04-2016 AMC99_RS05685 1521eaded07335fd1b6889ef8f25e7fd 432 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 4 432 1.0E-157 T 20-04-2016 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AMC99_RS05685 1521eaded07335fd1b6889ef8f25e7fd 432 SUPERFAMILY SSF51230 1 96 4.71E-30 T 20-04-2016 IPR011053 Single hybrid motif AMC99_RS05655 e8ed235dee39577c5ebb67a5592d7631 556 ProSitePatterns PS00217 Sugar transport proteins signature 2. 130 155 - T 20-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMC99_RS05655 e8ed235dee39577c5ebb67a5592d7631 556 Pfam PF00083 Sugar (and other) transporter 21 231 5.1E-28 T 20-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AMC99_RS05655 e8ed235dee39577c5ebb67a5592d7631 556 PANTHER PTHR23508:SF7 15 339 1.1E-152 T 20-04-2016 AMC99_RS05655 e8ed235dee39577c5ebb67a5592d7631 556 PANTHER PTHR23508:SF7 445 530 1.1E-152 T 20-04-2016 AMC99_RS05655 e8ed235dee39577c5ebb67a5592d7631 556 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 20-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMC99_RS05655 e8ed235dee39577c5ebb67a5592d7631 556 SUPERFAMILY SSF103473 447 535 5.23E-55 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS05655 e8ed235dee39577c5ebb67a5592d7631 556 SUPERFAMILY SSF103473 10 338 5.23E-55 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS05655 e8ed235dee39577c5ebb67a5592d7631 556 Gene3D G3DSA:1.20.1250.20 22 226 2.6E-21 T 20-04-2016 AMC99_RS05655 e8ed235dee39577c5ebb67a5592d7631 556 Gene3D G3DSA:1.20.1250.20 443 535 1.1E-21 T 20-04-2016 AMC99_RS05655 e8ed235dee39577c5ebb67a5592d7631 556 Gene3D G3DSA:1.20.1250.20 247 337 1.1E-21 T 20-04-2016 AMC99_RS05655 e8ed235dee39577c5ebb67a5592d7631 556 PANTHER PTHR23508 15 339 1.1E-152 T 20-04-2016 AMC99_RS05655 e8ed235dee39577c5ebb67a5592d7631 556 PANTHER PTHR23508 445 530 1.1E-152 T 20-04-2016 AMC99_RS00910 dac71efd3eb0e64906129c6d89d3e2e4 426 SUPERFAMILY SSF51735 16 210 3.15E-44 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS00910 dac71efd3eb0e64906129c6d89d3e2e4 426 PANTHER PTHR11374:SF4 15 425 2.7E-163 T 20-04-2016 AMC99_RS00910 dac71efd3eb0e64906129c6d89d3e2e4 426 SUPERFAMILY SSF48179 218 309 1.19E-28 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMC99_RS00910 dac71efd3eb0e64906129c6d89d3e2e4 426 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 425 1.9E-20 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AMC99_RS00910 dac71efd3eb0e64906129c6d89d3e2e4 426 Gene3D G3DSA:3.40.50.720 15 239 3.4E-58 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS00910 dac71efd3eb0e64906129c6d89d3e2e4 426 SMART SM00984 328 426 4.0E-24 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AMC99_RS00910 dac71efd3eb0e64906129c6d89d3e2e4 426 SUPERFAMILY SSF52413 319 424 8.89E-25 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AMC99_RS00910 dac71efd3eb0e64906129c6d89d3e2e4 426 Gene3D G3DSA:3.40.50.720 249 425 2.8E-49 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS00910 dac71efd3eb0e64906129c6d89d3e2e4 426 PANTHER PTHR11374 15 425 2.7E-163 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AMC99_RS00910 dac71efd3eb0e64906129c6d89d3e2e4 426 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 16 200 2.6E-49 T 20-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 AMC99_RS00910 dac71efd3eb0e64906129c6d89d3e2e4 426 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 219 305 8.8E-28 T 20-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 AMC99_RS00910 dac71efd3eb0e64906129c6d89d3e2e4 426 PIRSF PIRSF500136 8 426 4.4E-143 T 20-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AMC99_RS00910 dac71efd3eb0e64906129c6d89d3e2e4 426 PIRSF PIRSF000124 15 426 1.2E-78 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AMC99_RS00910 dac71efd3eb0e64906129c6d89d3e2e4 426 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 16 421 5.6E-121 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AMC99_RS06935 37ce9c902dca605a28db56caa96731a2 437 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 434 6.5E-129 T 20-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS06935 37ce9c902dca605a28db56caa96731a2 437 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 20-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS06935 37ce9c902dca605a28db56caa96731a2 437 PANTHER PTHR21090 8 434 8.1E-162 T 20-04-2016 AMC99_RS06935 37ce9c902dca605a28db56caa96731a2 437 PANTHER PTHR21090:SF5 8 434 8.1E-162 T 20-04-2016 AMC99_RS06935 37ce9c902dca605a28db56caa96731a2 437 SUPERFAMILY SSF55205 7 434 1.96E-127 T 20-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMC99_RS06935 37ce9c902dca605a28db56caa96731a2 437 Gene3D G3DSA:3.65.10.10 234 434 1.9E-52 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMC99_RS06935 37ce9c902dca605a28db56caa96731a2 437 PIRSF PIRSF000505 6 437 1.1E-119 T 20-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS06935 37ce9c902dca605a28db56caa96731a2 437 ProSitePatterns PS00885 EPSP synthase signature 2. 344 362 - T 20-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS06935 37ce9c902dca605a28db56caa96731a2 437 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 431 3.4E-112 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMC99_RS06935 37ce9c902dca605a28db56caa96731a2 437 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 437 31.925 T 20-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS06935 37ce9c902dca605a28db56caa96731a2 437 Gene3D G3DSA:3.65.10.10 22 233 1.5E-61 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMC99_RS10520 d98bb5a0466fc089c0d42ba9c8e72b74 523 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 32 511 2.0E-111 T 20-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AMC99_RS10520 d98bb5a0466fc089c0d42ba9c8e72b74 523 Pfam PF07690 Major Facilitator Superfamily 33 426 1.3E-44 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS10520 d98bb5a0466fc089c0d42ba9c8e72b74 523 SUPERFAMILY SSF103473 24 212 8.89E-62 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS10520 d98bb5a0466fc089c0d42ba9c8e72b74 523 SUPERFAMILY SSF103473 488 519 8.89E-62 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS10520 d98bb5a0466fc089c0d42ba9c8e72b74 523 SUPERFAMILY SSF103473 265 436 8.89E-62 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS10520 d98bb5a0466fc089c0d42ba9c8e72b74 523 PANTHER PTHR23501 25 519 1.8E-156 T 20-04-2016 AMC99_RS10520 d98bb5a0466fc089c0d42ba9c8e72b74 523 Gene3D G3DSA:1.20.1250.20 279 441 1.3E-13 T 20-04-2016 AMC99_RS10520 d98bb5a0466fc089c0d42ba9c8e72b74 523 Gene3D G3DSA:1.20.1250.20 493 513 1.3E-13 T 20-04-2016 AMC99_RS10520 d98bb5a0466fc089c0d42ba9c8e72b74 523 Gene3D G3DSA:1.20.1250.20 26 215 2.1E-27 T 20-04-2016 AMC99_RS10520 d98bb5a0466fc089c0d42ba9c8e72b74 523 PANTHER PTHR23501:SF51 25 519 1.8E-156 T 20-04-2016 AMC99_RS13285 063f39007ef56d99437c44c1876ae6da 538 Gene3D G3DSA:1.20.1250.20 25 221 1.4E-38 T 20-04-2016 AMC99_RS13285 063f39007ef56d99437c44c1876ae6da 538 SUPERFAMILY SSF103473 15 225 1.57E-53 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS13285 063f39007ef56d99437c44c1876ae6da 538 SUPERFAMILY SSF103473 314 516 1.57E-53 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS13285 063f39007ef56d99437c44c1876ae6da 538 Pfam PF07690 Major Facilitator Superfamily 33 351 2.6E-28 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS13285 063f39007ef56d99437c44c1876ae6da 538 Gene3D G3DSA:1.20.1250.20 328 509 4.8E-12 T 20-04-2016 AMC99_RS13285 063f39007ef56d99437c44c1876ae6da 538 PANTHER PTHR23505 1 237 1.7E-57 T 20-04-2016 AMC99_RS13285 063f39007ef56d99437c44c1876ae6da 538 PANTHER PTHR23505 331 488 1.7E-57 T 20-04-2016 AMC99_RS01570 77e0ba2718812ac23efa26d772d296b1 632 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 102 630 3.1E-197 T 20-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 AMC99_RS01570 77e0ba2718812ac23efa26d772d296b1 632 PANTHER PTHR36837 55 632 7.6E-189 T 20-04-2016 AMC99_RS01570 77e0ba2718812ac23efa26d772d296b1 632 SUPERFAMILY SSF53474 275 561 1.06E-35 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS01570 77e0ba2718812ac23efa26d772d296b1 632 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 145 313 2.5E-65 T 20-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- AMC99_RS01570 77e0ba2718812ac23efa26d772d296b1 632 Pfam PF00561 alpha/beta hydrolase fold 317 555 7.5E-9 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS01570 77e0ba2718812ac23efa26d772d296b1 632 PANTHER PTHR36837:SF2 55 632 7.6E-189 T 20-04-2016 AMC99_RS01570 77e0ba2718812ac23efa26d772d296b1 632 Gene3D G3DSA:3.40.50.1820 262 599 1.1E-32 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS04680 3fc93d5e9a55d6f5eddfbd9c5658775a 269 SUPERFAMILY SSF141868 25 266 7.06E-74 T 20-04-2016 IPR001633 EAL domain AMC99_RS04680 3fc93d5e9a55d6f5eddfbd9c5658775a 269 PANTHER PTHR33121 22 263 2.9E-65 T 20-04-2016 AMC99_RS04680 3fc93d5e9a55d6f5eddfbd9c5658775a 269 PANTHER PTHR33121:SF13 22 263 2.9E-65 T 20-04-2016 AMC99_RS04680 3fc93d5e9a55d6f5eddfbd9c5658775a 269 Pfam PF00563 EAL domain 27 257 6.8E-65 T 20-04-2016 IPR001633 EAL domain AMC99_RS04680 3fc93d5e9a55d6f5eddfbd9c5658775a 269 SMART SM00052 20 262 5.1E-76 T 20-04-2016 IPR001633 EAL domain AMC99_RS04680 3fc93d5e9a55d6f5eddfbd9c5658775a 269 Gene3D G3DSA:3.20.20.450 24 266 1.0E-75 T 20-04-2016 IPR001633 EAL domain AMC99_RS08200 b1d9a669af778df53084e4c909141101 132 SUPERFAMILY SSF89919 11 121 6.41E-27 T 20-04-2016 IPR023799 Ribosome-binding factor A domain AMC99_RS08200 b1d9a669af778df53084e4c909141101 132 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 13 120 4.1E-18 T 20-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMC99_RS08200 b1d9a669af778df53084e4c909141101 132 ProSitePatterns PS01319 Ribosome-binding factor A signature. 85 106 - T 20-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AMC99_RS08200 b1d9a669af778df53084e4c909141101 132 Pfam PF02033 Ribosome-binding factor A 14 119 5.7E-25 T 20-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMC99_RS08200 b1d9a669af778df53084e4c909141101 132 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 19 103 7.0E-39 T 20-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMC99_RS08200 b1d9a669af778df53084e4c909141101 132 PANTHER PTHR33515 12 132 5.8E-23 T 20-04-2016 AMC99_RS08200 b1d9a669af778df53084e4c909141101 132 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 10 126 18.867 T 20-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMC99_RS08200 b1d9a669af778df53084e4c909141101 132 Gene3D G3DSA:3.30.300.20 11 126 6.2E-29 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta AMC99_RS11150 98a285e9852670eedd9c4a9c829d0d4b 358 Gene3D G3DSA:1.10.620.20 7 285 3.9E-98 T 20-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 AMC99_RS11150 98a285e9852670eedd9c4a9c829d0d4b 358 SUPERFAMILY SSF47240 9 317 3.18E-84 T 20-04-2016 IPR009078 Ferritin-like superfamily AMC99_RS11150 98a285e9852670eedd9c4a9c829d0d4b 358 Pfam PF00268 Ribonucleotide reductase, small chain 7 278 1.4E-73 T 20-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 AMC99_RS11150 98a285e9852670eedd9c4a9c829d0d4b 358 PIRSF PIRSF000355 1 316 3.7E-114 T 20-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 AMC99_RS11150 98a285e9852670eedd9c4a9c829d0d4b 358 PANTHER PTHR23409 12 308 6.9E-55 T 20-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 AMC99_RS04460 8488ea4e07ad5d775091e52b4997d078 467 Pfam PF13560 Helix-turn-helix domain 10 63 1.4E-13 T 20-04-2016 AMC99_RS04460 8488ea4e07ad5d775091e52b4997d078 467 PIRSF PIRSF019251 2 467 8.3E-187 T 20-04-2016 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 AMC99_RS04460 8488ea4e07ad5d775091e52b4997d078 467 Pfam PF06114 Domain of unknown function (DUF955) 209 307 3.7E-12 T 20-04-2016 IPR010359 HTH domain, IrrE-type AMC99_RS04460 8488ea4e07ad5d775091e52b4997d078 467 PANTHER PTHR10245 4 103 9.4E-12 T 20-04-2016 AMC99_RS04460 8488ea4e07ad5d775091e52b4997d078 467 Gene3D G3DSA:1.10.260.40 4 73 6.0E-17 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS04460 8488ea4e07ad5d775091e52b4997d078 467 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 308 464 1.6E-65 T 20-04-2016 IPR018653 Domain of unknown function DUF2083,transcriptional regulator AMC99_RS04460 8488ea4e07ad5d775091e52b4997d078 467 SUPERFAMILY SSF47413 8 67 1.34E-13 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS04460 8488ea4e07ad5d775091e52b4997d078 467 SMART SM00530 12 67 3.7E-14 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS02580 eac39f99bc08cfc9edfa1e4f163e11cf 302 PANTHER PTHR11066:SF34 32 297 6.1E-92 T 20-04-2016 AMC99_RS02580 eac39f99bc08cfc9edfa1e4f163e11cf 302 SUPERFAMILY SSF54637 12 121 8.96E-32 T 20-04-2016 IPR029069 HotDog domain AMC99_RS02580 eac39f99bc08cfc9edfa1e4f163e11cf 302 Gene3D G3DSA:3.10.129.10 13 122 4.2E-37 T 20-04-2016 IPR029069 HotDog domain AMC99_RS02580 eac39f99bc08cfc9edfa1e4f163e11cf 302 Pfam PF13622 Thioesterase-like superfamily 37 294 6.2E-57 T 20-04-2016 AMC99_RS02580 eac39f99bc08cfc9edfa1e4f163e11cf 302 PANTHER PTHR11066 32 297 6.1E-92 T 20-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 AMC99_RS02580 eac39f99bc08cfc9edfa1e4f163e11cf 302 SUPERFAMILY SSF54637 127 296 7.47E-53 T 20-04-2016 IPR029069 HotDog domain AMC99_RS02580 eac39f99bc08cfc9edfa1e4f163e11cf 302 Gene3D G3DSA:3.10.129.10 133 296 1.5E-54 T 20-04-2016 IPR029069 HotDog domain AMC99_RS13270 f34099e45feebb562b4a44a9bac59ce3 296 Pfam PF01430 Hsp33 protein 10 292 7.9E-71 T 20-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AMC99_RS13270 f34099e45feebb562b4a44a9bac59ce3 296 PANTHER PTHR30111 8 296 6.7E-47 T 20-04-2016 AMC99_RS13270 f34099e45feebb562b4a44a9bac59ce3 296 PIRSF PIRSF005261 1 296 1.5E-68 T 20-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AMC99_RS13270 f34099e45feebb562b4a44a9bac59ce3 296 PANTHER PTHR30111:SF1 8 296 6.7E-47 T 20-04-2016 AMC99_RS13270 f34099e45feebb562b4a44a9bac59ce3 296 Gene3D G3DSA:3.55.30.10 10 242 8.6E-67 T 20-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AMC99_RS13270 f34099e45feebb562b4a44a9bac59ce3 296 Gene3D G3DSA:3.90.1280.10 250 292 6.6E-10 T 20-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AMC99_RS13270 f34099e45feebb562b4a44a9bac59ce3 296 SUPERFAMILY SSF118352 248 295 3.4E-11 T 20-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AMC99_RS13270 f34099e45feebb562b4a44a9bac59ce3 296 SUPERFAMILY SSF64397 12 257 6.54E-61 T 20-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AMC99_RS12300 4629512c35c67196e933346afd4630b9 506 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 328 487 3.7E-47 T 20-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMC99_RS12300 4629512c35c67196e933346afd4630b9 506 Pfam PF05683 Fumarase C-terminus 291 489 2.4E-75 T 20-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMC99_RS12300 4629512c35c67196e933346afd4630b9 506 PANTHER PTHR30389:SF1 1 501 1.2E-276 T 20-04-2016 AMC99_RS12300 4629512c35c67196e933346afd4630b9 506 PIRSF PIRSF001394 1 504 2.6E-196 T 20-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 AMC99_RS12300 4629512c35c67196e933346afd4630b9 506 Pfam PF05681 Fumarate hydratase (Fumerase) 14 287 4.5E-96 T 20-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AMC99_RS12300 4629512c35c67196e933346afd4630b9 506 Gene3D G3DSA:3.20.130.10 304 488 3.7E-71 T 20-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMC99_RS12300 4629512c35c67196e933346afd4630b9 506 SUPERFAMILY SSF117457 319 488 7.72E-61 T 20-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMC99_RS12300 4629512c35c67196e933346afd4630b9 506 PANTHER PTHR30389 1 501 1.2E-276 T 20-04-2016 AMC99_RS12300 4629512c35c67196e933346afd4630b9 506 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 13 287 1.6E-61 T 20-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AMC99_RS04360 089c5c8b1421b7bcc68a09b6fadb815d 285 PANTHER PTHR30468 14 283 6.0E-88 T 20-04-2016 AMC99_RS04360 089c5c8b1421b7bcc68a09b6fadb815d 285 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 17 275 1.3E-62 T 20-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 AMC99_RS04360 089c5c8b1421b7bcc68a09b6fadb815d 285 Gene3D G3DSA:3.60.130.10 13 283 2.0E-95 T 20-04-2016 AMC99_RS04360 089c5c8b1421b7bcc68a09b6fadb815d 285 SUPERFAMILY SSF51197 15 283 1.47E-90 T 20-04-2016 AMC99_RS05695 c447811b50b291ebc279370024882b73 127 Pfam PF03061 Thioesterase superfamily 22 95 7.2E-9 T 20-04-2016 IPR006683 Thioesterase domain AMC99_RS05695 c447811b50b291ebc279370024882b73 127 Gene3D G3DSA:3.10.129.10 2 124 1.6E-24 T 20-04-2016 IPR029069 HotDog domain AMC99_RS05695 c447811b50b291ebc279370024882b73 127 PANTHER PTHR11049 1 122 4.5E-25 T 20-04-2016 AMC99_RS05695 c447811b50b291ebc279370024882b73 127 PANTHER PTHR11049:SF5 1 122 4.5E-25 T 20-04-2016 AMC99_RS05695 c447811b50b291ebc279370024882b73 127 SUPERFAMILY SSF54637 3 124 8.55E-27 T 20-04-2016 IPR029069 HotDog domain AMC99_RS05455 5ce7f69d4823b243cab897f70ac5099e 431 PANTHER PTHR23513 16 412 6.1E-85 T 20-04-2016 AMC99_RS05455 5ce7f69d4823b243cab897f70ac5099e 431 Pfam PF05977 Transmembrane secretion effector 10 406 1.5E-27 T 20-04-2016 IPR010290 Transmembrane secretion effector AMC99_RS05455 5ce7f69d4823b243cab897f70ac5099e 431 Gene3D G3DSA:1.20.1250.20 239 406 7.0E-10 T 20-04-2016 AMC99_RS05455 5ce7f69d4823b243cab897f70ac5099e 431 Gene3D G3DSA:1.20.1250.20 55 204 2.5E-18 T 20-04-2016 AMC99_RS05455 5ce7f69d4823b243cab897f70ac5099e 431 SUPERFAMILY SSF103473 18 409 1.27E-35 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS05455 5ce7f69d4823b243cab897f70ac5099e 431 PANTHER PTHR23513:SF9 16 412 6.1E-85 T 20-04-2016 AMC99_RS10430 737fd84f99418814830711a7b66331ef 206 Pfam PF12796 Ankyrin repeats (3 copies) 47 130 1.8E-12 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain AMC99_RS10430 737fd84f99418814830711a7b66331ef 206 Gene3D G3DSA:1.25.40.20 47 176 4.9E-34 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain AMC99_RS10430 737fd84f99418814830711a7b66331ef 206 SMART SM00248 99 128 0.0037 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMC99_RS10430 737fd84f99418814830711a7b66331ef 206 SMART SM00248 66 95 0.11 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMC99_RS10430 737fd84f99418814830711a7b66331ef 206 SMART SM00248 132 161 0.35 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMC99_RS10430 737fd84f99418814830711a7b66331ef 206 SUPERFAMILY SSF48403 48 174 1.55E-31 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain AMC99_RS10430 737fd84f99418814830711a7b66331ef 206 PANTHER PTHR24198 59 201 6.3E-31 T 20-04-2016 AMC99_RS04935 302302741cef20dc8d50c48f5941c292 494 Pfam PF03167 Uracil DNA glycosylase superfamily 325 482 5.4E-35 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like AMC99_RS04935 302302741cef20dc8d50c48f5941c292 494 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 24 268 1.1E-67 T 20-04-2016 IPR023875 DNA metabolism protein, putative AMC99_RS04935 302302741cef20dc8d50c48f5941c292 494 Gene3D G3DSA:3.40.470.10 299 492 6.8E-59 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like AMC99_RS04935 302302741cef20dc8d50c48f5941c292 494 SUPERFAMILY SSF52141 300 491 3.04E-52 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like AMC99_RS04935 302302741cef20dc8d50c48f5941c292 494 SMART SM00987 324 483 1.2E-36 T 20-04-2016 AMC99_RS04935 302302741cef20dc8d50c48f5941c292 494 Pfam PF13566 Domain of unknown function (DUF4130 100 267 9.5E-42 T 20-04-2016 IPR025404 Domain of unknown function DUF4130 AMC99_RS04935 302302741cef20dc8d50c48f5941c292 494 SMART SM00986 324 483 1.2E-36 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like AMC99_RS04935 302302741cef20dc8d50c48f5941c292 494 PANTHER PTHR33693 173 494 1.7E-119 T 20-04-2016 AMC99_RS04935 302302741cef20dc8d50c48f5941c292 494 PANTHER PTHR33693:SF3 173 494 1.7E-119 T 20-04-2016 AMC99_RS04935 302302741cef20dc8d50c48f5941c292 494 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 270 485 7.4E-94 T 20-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain AMC99_RS10240 b80caf0450d0fc54a29449991b651bf9 335 TIGRFAM TIGR04390 OMP_YaiO_dom: outer membrane protein, YaiO family 118 294 4.4E-22 T 20-04-2016 IPR030887 YaiO family, OMP domain AMC99_RS10240 b80caf0450d0fc54a29449991b651bf9 335 Gene3D G3DSA:1.25.40.10 26 102 1.1E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS10240 b80caf0450d0fc54a29449991b651bf9 335 SUPERFAMILY SSF48452 26 99 1.37E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS10240 b80caf0450d0fc54a29449991b651bf9 335 Pfam PF14559 Tetratricopeptide repeat 36 88 3.2E-6 T 20-04-2016 AMC99_RS03585 04264f6ca52d68a8a7735efbe52bdcab 493 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 380 478 2.3E-12 T 20-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AMC99_RS03585 04264f6ca52d68a8a7735efbe52bdcab 493 Pfam PF01266 FAD dependent oxidoreductase 6 325 6.8E-49 T 20-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMC99_RS03585 04264f6ca52d68a8a7735efbe52bdcab 493 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 10 27 - T 20-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AMC99_RS03585 04264f6ca52d68a8a7735efbe52bdcab 493 Gene3D G3DSA:3.50.50.60 4 242 4.6E-39 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03585 04264f6ca52d68a8a7735efbe52bdcab 493 SUPERFAMILY SSF51905 4 301 2.78E-36 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03585 04264f6ca52d68a8a7735efbe52bdcab 493 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 354 364 - T 20-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AMC99_RS03585 04264f6ca52d68a8a7735efbe52bdcab 493 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 349 361 9.1E-29 T 20-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AMC99_RS03585 04264f6ca52d68a8a7735efbe52bdcab 493 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 34 46 9.1E-29 T 20-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AMC99_RS03585 04264f6ca52d68a8a7735efbe52bdcab 493 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 5 17 9.1E-29 T 20-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AMC99_RS03585 04264f6ca52d68a8a7735efbe52bdcab 493 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 315 321 9.1E-29 T 20-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AMC99_RS03585 04264f6ca52d68a8a7735efbe52bdcab 493 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 79 91 9.1E-29 T 20-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AMC99_RS03585 04264f6ca52d68a8a7735efbe52bdcab 493 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 18 28 9.1E-29 T 20-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AMC99_RS03585 04264f6ca52d68a8a7735efbe52bdcab 493 PANTHER PTHR11985 5 492 4.0E-174 T 20-04-2016 AMC99_RS02740 09cbf0bc634040a579a73624d91fff83 192 PANTHER PTHR19278 4 167 4.7E-26 T 20-04-2016 AMC99_RS02740 09cbf0bc634040a579a73624d91fff83 192 Pfam PF00156 Phosphoribosyl transferase domain 47 175 2.7E-11 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMC99_RS02740 09cbf0bc634040a579a73624d91fff83 192 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 6 191 3.4E-63 T 20-04-2016 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS02740 09cbf0bc634040a579a73624d91fff83 192 Gene3D G3DSA:3.40.50.2020 2 176 6.1E-40 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like AMC99_RS02740 09cbf0bc634040a579a73624d91fff83 192 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 192 25.079 T 20-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS02740 09cbf0bc634040a579a73624d91fff83 192 SUPERFAMILY SSF53271 5 166 4.4E-33 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 Gene3D G3DSA:3.40.50.720 2 231 3.9E-63 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 5.03E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 5.03E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 5.03E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 3.95E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 3.95E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 3.95E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.95E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.95E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 3.95E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 PANTHER PTHR24322 54 148 1.2E-53 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 PANTHER PTHR24322 164 196 1.2E-53 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 PANTHER PTHR24322 12 31 1.2E-53 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 198 4.1E-6 T 20-04-2016 AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 PANTHER PTHR24322:SF530 54 148 1.2E-53 T 20-04-2016 AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 PANTHER PTHR24322:SF530 164 196 1.2E-53 T 20-04-2016 AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 PANTHER PTHR24322:SF530 12 31 1.2E-53 T 20-04-2016 AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 Pfam PF00106 short chain dehydrogenase 8 205 6.9E-44 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08180 3fd6432d7d6da1cf3b49783083b17665 309 SUPERFAMILY SSF51735 1 245 6.77E-62 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS11975 f3316cf5c62d7c61078bd931e73ca80d 239 Pfam PF07277 SapC 7 228 2.5E-66 T 20-04-2016 IPR010836 SapC AMC99_RS09170 ef91c29fd7d258d330ce05c5eb47dcf6 337 Gene3D G3DSA:3.40.50.1100 46 148 3.2E-40 T 20-04-2016 AMC99_RS09170 ef91c29fd7d258d330ce05c5eb47dcf6 337 PANTHER PTHR10314:SF83 14 330 2.3E-139 T 20-04-2016 AMC99_RS09170 ef91c29fd7d258d330ce05c5eb47dcf6 337 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 20-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AMC99_RS09170 ef91c29fd7d258d330ce05c5eb47dcf6 337 Gene3D G3DSA:3.40.50.1100 155 326 2.2E-63 T 20-04-2016 AMC99_RS09170 ef91c29fd7d258d330ce05c5eb47dcf6 337 Gene3D G3DSA:3.40.50.1100 4 45 2.2E-63 T 20-04-2016 AMC99_RS09170 ef91c29fd7d258d330ce05c5eb47dcf6 337 PANTHER PTHR10314 14 330 2.3E-139 T 20-04-2016 AMC99_RS09170 ef91c29fd7d258d330ce05c5eb47dcf6 337 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 12 308 9.3E-67 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_RS09170 ef91c29fd7d258d330ce05c5eb47dcf6 337 SUPERFAMILY SSF53686 6 330 4.06E-96 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_RS11440 7c3c4bf3f249c5e90ea8438cd855f263 138 Pfam PF00472 RF-1 domain 14 133 6.4E-19 T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMC99_RS11440 7c3c4bf3f249c5e90ea8438cd855f263 138 Gene3D G3DSA:3.30.160.200 14 104 1.2E-23 T 20-04-2016 AMC99_RS11440 7c3c4bf3f249c5e90ea8438cd855f263 138 PANTHER PTHR11075 14 137 7.3E-19 T 20-04-2016 AMC99_RS11440 7c3c4bf3f249c5e90ea8438cd855f263 138 SUPERFAMILY SSF75620 17 110 8.63E-6 T 20-04-2016 AMC99_RS11825 b294134f9e5e7d0027cd6038ec45864b 165 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 42 164 4.1E-44 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMC99_RS11825 b294134f9e5e7d0027cd6038ec45864b 165 PANTHER PTHR10173:SF18 28 164 1.0E-50 T 20-04-2016 AMC99_RS11825 b294134f9e5e7d0027cd6038ec45864b 165 Pfam PF01641 SelR domain 45 164 2.7E-49 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMC99_RS11825 b294134f9e5e7d0027cd6038ec45864b 165 PANTHER PTHR10173 28 164 1.0E-50 T 20-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 AMC99_RS11825 b294134f9e5e7d0027cd6038ec45864b 165 Gene3D G3DSA:2.170.150.20 36 164 6.0E-56 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMC99_RS11825 b294134f9e5e7d0027cd6038ec45864b 165 SUPERFAMILY SSF51316 40 164 3.82E-53 T 20-04-2016 IPR011057 Mss4-like AMC99_RS00325 1f8d60a99ff5c0c9b91c13fde1595da4 276 SUPERFAMILY SSF52833 159 268 2.28E-7 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS00325 1f8d60a99ff5c0c9b91c13fde1595da4 276 TIGRFAM TIGR02740 TraF-like: TraF-like protein 13 271 3.4E-71 T 20-04-2016 IPR014111 Type IV conjugative transfer system protein TraF AMC99_RS00325 1f8d60a99ff5c0c9b91c13fde1595da4 276 Pfam PF13728 F plasmid transfer operon protein 52 265 3.4E-71 T 20-04-2016 AMC99_RS00325 1f8d60a99ff5c0c9b91c13fde1595da4 276 Gene3D G3DSA:3.40.30.10 167 214 1.0E-5 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS09855 a73583f433346e6a7f313a534f6baed0 420 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 11 419 38.457 T 20-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMC99_RS09855 a73583f433346e6a7f313a534f6baed0 420 Gene3D G3DSA:3.40.309.10 231 377 2.5E-32 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMC99_RS09855 a73583f433346e6a7f313a534f6baed0 420 Pfam PF00171 Aldehyde dehydrogenase family 16 288 1.2E-17 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS09855 a73583f433346e6a7f313a534f6baed0 420 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 19 409 2.5E-128 T 20-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMC99_RS09855 a73583f433346e6a7f313a534f6baed0 420 PIRSF PIRSF000151 5 420 1.9E-160 T 20-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMC99_RS09855 a73583f433346e6a7f313a534f6baed0 420 PANTHER PTHR11063 1 419 4.4E-156 T 20-04-2016 AMC99_RS09855 a73583f433346e6a7f313a534f6baed0 420 Gene3D G3DSA:3.40.605.10 7 229 2.4E-97 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS09855 a73583f433346e6a7f313a534f6baed0 420 Gene3D G3DSA:3.40.605.10 378 419 2.4E-97 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS09855 a73583f433346e6a7f313a534f6baed0 420 SUPERFAMILY SSF53720 12 419 4.45E-106 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMC99_RS09855 a73583f433346e6a7f313a534f6baed0 420 PANTHER PTHR11063:SF8 1 419 4.4E-156 T 20-04-2016 AMC99_RS13105 c46775a027b5a41f93c60133fc1ff5fc 436 Gene3D G3DSA:3.30.360.10 151 305 3.0E-50 T 20-04-2016 AMC99_RS13105 c46775a027b5a41f93c60133fc1ff5fc 436 PANTHER PTHR21499:SF2 1 376 1.3E-110 T 20-04-2016 AMC99_RS13105 c46775a027b5a41f93c60133fc1ff5fc 436 PIRSF PIRSF000098 2 435 2.7E-142 T 20-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 AMC99_RS13105 c46775a027b5a41f93c60133fc1ff5fc 436 SUPERFAMILY SSF51735 4 142 2.8E-31 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS13105 c46775a027b5a41f93c60133fc1ff5fc 436 Gene3D G3DSA:3.40.50.720 2 150 6.2E-43 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS13105 c46775a027b5a41f93c60133fc1ff5fc 436 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 185 207 - T 20-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 AMC99_RS13105 c46775a027b5a41f93c60133fc1ff5fc 436 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 11 130 5.9E-12 T 20-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AMC99_RS13105 c46775a027b5a41f93c60133fc1ff5fc 436 Pfam PF00742 Homoserine dehydrogenase 139 322 1.7E-62 T 20-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 AMC99_RS13105 c46775a027b5a41f93c60133fc1ff5fc 436 Gene3D G3DSA:3.30.70.260 355 407 3.0E-7 T 20-04-2016 AMC99_RS13105 c46775a027b5a41f93c60133fc1ff5fc 436 SUPERFAMILY SSF55021 352 420 4.31E-11 T 20-04-2016 AMC99_RS13105 c46775a027b5a41f93c60133fc1ff5fc 436 SUPERFAMILY SSF55347 139 309 1.05E-49 T 20-04-2016 AMC99_RS13105 c46775a027b5a41f93c60133fc1ff5fc 436 PANTHER PTHR21499 1 376 1.3E-110 T 20-04-2016 AMC99_RS13105 c46775a027b5a41f93c60133fc1ff5fc 436 Pfam PF01842 ACT domain 355 405 5.4E-10 T 20-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMC99_RS06145 e6e7b67fd2f2ca143a3828c76576e022 476 Gene3D G3DSA:3.40.309.10 231 422 4.4E-49 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMC99_RS06145 e6e7b67fd2f2ca143a3828c76576e022 476 PIRSF PIRSF036492 1 476 6.0E-155 T 20-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 AMC99_RS06145 e6e7b67fd2f2ca143a3828c76576e022 476 SUPERFAMILY SSF53720 6 446 1.09E-109 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMC99_RS06145 e6e7b67fd2f2ca143a3828c76576e022 476 PANTHER PTHR11699 6 476 1.5E-136 T 20-04-2016 AMC99_RS06145 e6e7b67fd2f2ca143a3828c76576e022 476 Gene3D G3DSA:3.40.605.10 5 230 2.5E-48 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS06145 e6e7b67fd2f2ca143a3828c76576e022 476 PANTHER PTHR11699:SF216 6 476 1.5E-136 T 20-04-2016 AMC99_RS06145 e6e7b67fd2f2ca143a3828c76576e022 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 217 224 - T 20-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AMC99_RS06145 e6e7b67fd2f2ca143a3828c76576e022 476 Pfam PF00171 Aldehyde dehydrogenase family 3 445 9.1E-87 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS05165 64eda2bf73bcf2d297427844bd964ffb 318 PANTHER PTHR10696 30 314 5.1E-14 T 20-04-2016 AMC99_RS05165 64eda2bf73bcf2d297427844bd964ffb 318 Gene3D G3DSA:3.60.130.10 223 281 2.5E-35 T 20-04-2016 AMC99_RS05165 64eda2bf73bcf2d297427844bd964ffb 318 Gene3D G3DSA:3.60.130.10 28 184 2.5E-35 T 20-04-2016 AMC99_RS05165 64eda2bf73bcf2d297427844bd964ffb 318 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 19 281 2.7E-37 T 20-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 AMC99_RS05165 64eda2bf73bcf2d297427844bd964ffb 318 SUPERFAMILY SSF51197 17 166 2.88E-37 T 20-04-2016 AMC99_RS05165 64eda2bf73bcf2d297427844bd964ffb 318 SUPERFAMILY SSF51197 196 281 2.88E-37 T 20-04-2016 AMC99_RS05165 64eda2bf73bcf2d297427844bd964ffb 318 PANTHER PTHR10696:SF28 30 314 5.1E-14 T 20-04-2016 AMC99_RS10695 26e1f488b8e4197bbd9a250d99b46ed2 348 Gene3D G3DSA:3.40.50.1110 260 344 3.2E-5 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain AMC99_RS10695 26e1f488b8e4197bbd9a250d99b46ed2 348 SUPERFAMILY SSF52266 258 346 4.03E-7 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain AMC99_RS11015 33e00b808164dbf014b28325b66d6f8d 294 Pfam PF13717 zinc-ribbon domain 1 35 7.9E-14 T 20-04-2016 AMC99_RS11015 33e00b808164dbf014b28325b66d6f8d 294 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 1 37 8.5E-17 T 20-04-2016 IPR011723 Zinc finger/thioredoxin putative AMC99_RS03925 0b22c49f45171d0af13fc044b8669b26 100 Pfam PF07484 Phage Tail Collar Domain 20 74 1.3E-23 T 20-04-2016 IPR011083 Phage tail collar domain AMC99_RS03925 0b22c49f45171d0af13fc044b8669b26 100 Gene3D G3DSA:3.90.1340.10 12 81 9.6E-27 T 20-04-2016 IPR011083 Phage tail collar domain AMC99_RS03925 0b22c49f45171d0af13fc044b8669b26 100 PANTHER PTHR34720 15 85 2.5E-18 T 20-04-2016 AMC99_RS03925 0b22c49f45171d0af13fc044b8669b26 100 SUPERFAMILY SSF88874 14 82 3.01E-24 T 20-04-2016 AMC99_RS12630 8e7869f972cd36ee4a80f8c27956229e 140 Pfam PF02410 Ribosomal silencing factor during starvation 34 128 6.2E-26 T 20-04-2016 AMC99_RS12630 8e7869f972cd36ee4a80f8c27956229e 140 PANTHER PTHR21043 32 132 1.2E-37 T 20-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMC99_RS12630 8e7869f972cd36ee4a80f8c27956229e 140 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 31 128 2.8E-34 T 20-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMC99_RS12630 8e7869f972cd36ee4a80f8c27956229e 140 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 23 129 23.96 T 20-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMC99_RS12630 8e7869f972cd36ee4a80f8c27956229e 140 SUPERFAMILY SSF81301 29 131 3.92E-35 T 20-04-2016 AMC99_RS12630 8e7869f972cd36ee4a80f8c27956229e 140 Gene3D G3DSA:3.30.460.10 28 129 2.2E-35 T 20-04-2016 AMC99_RS05680 e0935feb9a378388408baaf02e70ceb4 148 Pfam PF00582 Universal stress protein family 1 137 1.6E-9 T 20-04-2016 IPR006016 UspA GO:0006950 AMC99_RS05680 e0935feb9a378388408baaf02e70ceb4 148 Gene3D G3DSA:3.40.50.620 2 137 3.9E-12 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS05680 e0935feb9a378388408baaf02e70ceb4 148 SUPERFAMILY SSF52402 2 138 8.12E-8 T 20-04-2016 AMC99_RS13545 ec2717b4e0234f5beaaddc30d646848f 355 PANTHER PTHR11075 6 353 2.1E-172 T 20-04-2016 AMC99_RS13545 ec2717b4e0234f5beaaddc30d646848f 355 Pfam PF00472 RF-1 domain 208 317 2.7E-43 T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMC99_RS13545 ec2717b4e0234f5beaaddc30d646848f 355 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 6 354 6.8E-149 T 20-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AMC99_RS13545 ec2717b4e0234f5beaaddc30d646848f 355 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 224 240 - T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMC99_RS13545 ec2717b4e0234f5beaaddc30d646848f 355 Pfam PF03462 PCRF domain 12 200 4.4E-66 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AMC99_RS13545 ec2717b4e0234f5beaaddc30d646848f 355 SUPERFAMILY SSF75620 12 350 9.55E-126 T 20-04-2016 AMC99_RS13545 ec2717b4e0234f5beaaddc30d646848f 355 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 4 354 38.86 T 20-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AMC99_RS13545 ec2717b4e0234f5beaaddc30d646848f 355 SMART SM00937 60 175 3.1E-58 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AMC99_RS13545 ec2717b4e0234f5beaaddc30d646848f 355 Gene3D G3DSA:3.30.160.20 207 282 1.2E-36 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain AMC99_RS13545 ec2717b4e0234f5beaaddc30d646848f 355 Gene3D G3DSA:1.20.58.410 8 90 8.0E-9 T 20-04-2016 AMC99_RS13545 ec2717b4e0234f5beaaddc30d646848f 355 PANTHER PTHR11075:SF9 6 353 2.1E-172 T 20-04-2016 AMC99_RS12000 810bc4d9c9b4b2450dbaecf301d69293 170 PIRSF PIRSF031796 7 168 1.6E-35 T 20-04-2016 IPR009394 DNA repair protein MmcB-like AMC99_RS12000 810bc4d9c9b4b2450dbaecf301d69293 170 Pfam PF06319 Protein of unknown function (DUF1052) 21 161 3.4E-36 T 20-04-2016 IPR009394 DNA repair protein MmcB-like AMC99_RS10425 2c5c99b62f046bff72f44c05e733dc03 223 TIGRFAM TIGR02396 diverge_rpsU: rpsU-divergently transcribed protein 30 200 2.7E-47 T 20-04-2016 IPR012762 Ubiquinone biosynthesis protein COQ9 GO:0006744 UniPathway: UPA00232 AMC99_RS10425 2c5c99b62f046bff72f44c05e733dc03 223 Pfam PF08511 COQ9 121 197 4.9E-29 T 20-04-2016 IPR013718 COQ9 UniPathway: UPA00232 AMC99_RS10425 2c5c99b62f046bff72f44c05e733dc03 223 PANTHER PTHR21427 32 196 3.2E-24 T 20-04-2016 AMC99_RS10580 53743a8b941fd149c034d7fc3aa13b95 92 PANTHER PTHR33677 7 89 8.3E-29 T 20-04-2016 AMC99_RS10580 53743a8b941fd149c034d7fc3aa13b95 92 Pfam PF02583 Metal-sensitive transcriptional repressor 7 88 1.1E-29 T 20-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AMC99_RS12895 73a1658ea2ac9f638af5079f46afabb0 432 PANTHER PTHR22777:SF8 8 429 5.6E-149 T 20-04-2016 AMC99_RS12895 73a1658ea2ac9f638af5079f46afabb0 432 SUPERFAMILY SSF54631 205 339 6.08E-24 T 20-04-2016 AMC99_RS12895 73a1658ea2ac9f638af5079f46afabb0 432 SUPERFAMILY SSF56176 350 429 6.82E-18 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMC99_RS12895 73a1658ea2ac9f638af5079f46afabb0 432 PANTHER PTHR22777 8 429 5.6E-149 T 20-04-2016 AMC99_RS12895 73a1658ea2ac9f638af5079f46afabb0 432 Pfam PF00571 CBS domain 285 336 0.0028 T 20-04-2016 IPR000644 CBS domain AMC99_RS12895 73a1658ea2ac9f638af5079f46afabb0 432 Pfam PF01595 Domain of unknown function DUF21 11 201 4.1E-43 T 20-04-2016 IPR002550 Domain of unknown function DUF21 AMC99_RS12895 73a1658ea2ac9f638af5079f46afabb0 432 Pfam PF03471 Transporter associated domain 353 429 3.3E-16 T 20-04-2016 IPR005170 Transporter-associated domain AMC99_RS12895 73a1658ea2ac9f638af5079f46afabb0 432 Gene3D G3DSA:3.10.580.10 205 331 1.2E-13 T 20-04-2016 AMC99_RS12895 73a1658ea2ac9f638af5079f46afabb0 432 SMART SM01091 352 431 5.2E-23 T 20-04-2016 IPR005170 Transporter-associated domain AMC99_RS12895 73a1658ea2ac9f638af5079f46afabb0 432 Gene3D G3DSA:3.30.465.10 332 429 2.1E-21 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMC99_RS06090 0a75868ecbf3d6769125163914529087 161 SUPERFAMILY SSF54862 35 144 1.38E-28 T 20-04-2016 AMC99_RS06090 0a75868ecbf3d6769125163914529087 161 PANTHER PTHR10849:SF20 7 161 1.7E-111 T 20-04-2016 AMC99_RS06090 0a75868ecbf3d6769125163914529087 161 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 9 158 28.507 T 20-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 AMC99_RS06090 0a75868ecbf3d6769125163914529087 161 Gene3D G3DSA:1.10.1060.10 14 137 1.7E-24 T 20-04-2016 AMC99_RS06090 0a75868ecbf3d6769125163914529087 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_RS06090 0a75868ecbf3d6769125163914529087 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 101 112 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_RS06090 0a75868ecbf3d6769125163914529087 161 PANTHER PTHR10849 7 161 1.7E-111 T 20-04-2016 AMC99_RS06090 0a75868ecbf3d6769125163914529087 161 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 139 3.1E-51 T 20-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 AMC99_RS06090 0a75868ecbf3d6769125163914529087 161 Pfam PF12838 4Fe-4S dicluster domain 61 115 4.0E-13 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_RS11715 62d2530a1e3dcf4edf547e31de3b9992 263 PIRSF PIRSF012318 1 263 2.8E-85 T 20-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 AMC99_RS11715 62d2530a1e3dcf4edf547e31de3b9992 263 PANTHER PTHR21496:SF6 10 263 4.3E-93 T 20-04-2016 AMC99_RS11715 62d2530a1e3dcf4edf547e31de3b9992 263 SUPERFAMILY SSF47240 73 217 5.02E-17 T 20-04-2016 IPR009078 Ferritin-like superfamily AMC99_RS11715 62d2530a1e3dcf4edf547e31de3b9992 263 PANTHER PTHR21496 10 263 4.3E-93 T 20-04-2016 AMC99_RS11715 62d2530a1e3dcf4edf547e31de3b9992 263 Pfam PF04305 Protein of unknown function (DUF455) 14 258 5.7E-93 T 20-04-2016 IPR007402 Protein of unknown function DUF455 AMC99_RS00080 f88acb828866314524f46549ccff7a4a 290 Gene3D G3DSA:3.40.50.1820 51 284 4.8E-37 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS00080 f88acb828866314524f46549ccff7a4a 290 Pfam PF01738 Dienelactone hydrolase family 63 284 8.6E-34 T 20-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 AMC99_RS00080 f88acb828866314524f46549ccff7a4a 290 SUPERFAMILY SSF53474 52 284 1.69E-27 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS00080 f88acb828866314524f46549ccff7a4a 290 PANTHER PTHR17630 62 290 2.2E-43 T 20-04-2016 AMC99_RS00080 f88acb828866314524f46549ccff7a4a 290 PANTHER PTHR17630:SF51 62 290 2.2E-43 T 20-04-2016 AMC99_RS00705 98b13b36b3aaccfbf490da965cfd7e9b 159 Gene3D G3DSA:3.90.550.10 4 154 2.5E-18 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS00705 98b13b36b3aaccfbf490da965cfd7e9b 159 Pfam PF12804 MobA-like NTP transferase domain 4 117 1.3E-8 T 20-04-2016 IPR025877 MobA-like NTP transferase AMC99_RS00705 98b13b36b3aaccfbf490da965cfd7e9b 159 SUPERFAMILY SSF53448 4 150 2.42E-7 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS09375 82e590382b8824ad7fdf75b4e0f49fda 148 Pfam PF00075 RNase H 2 140 7.7E-47 T 20-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AMC99_RS09375 82e590382b8824ad7fdf75b4e0f49fda 148 Gene3D G3DSA:3.30.420.10 2 143 6.5E-58 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS09375 82e590382b8824ad7fdf75b4e0f49fda 148 PANTHER PTHR10642 4 142 1.0E-54 T 20-04-2016 AMC99_RS09375 82e590382b8824ad7fdf75b4e0f49fda 148 Hamap MF_00042 Ribonuclease H [rnhA]. 1 148 34.896 T 20-04-2016 IPR022892 Ribonuclease H GO:0004523 AMC99_RS09375 82e590382b8824ad7fdf75b4e0f49fda 148 SUPERFAMILY SSF53098 1 141 4.81E-56 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS02795 480bcd165bb0df91551e71aadd929b8c 295 Gene3D G3DSA:3.40.50.150 31 293 4.8E-59 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS02795 480bcd165bb0df91551e71aadd929b8c 295 PANTHER PTHR11061 10 215 7.2E-59 T 20-04-2016 AMC99_RS02795 480bcd165bb0df91551e71aadd929b8c 295 PANTHER PTHR11061 273 286 7.2E-59 T 20-04-2016 AMC99_RS02795 480bcd165bb0df91551e71aadd929b8c 295 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 92 209 1.1E-8 T 20-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AMC99_RS02795 480bcd165bb0df91551e71aadd929b8c 295 SUPERFAMILY SSF53335 11 269 1.4E-46 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS02795 480bcd165bb0df91551e71aadd929b8c 295 PANTHER PTHR11061:SF33 10 215 7.2E-59 T 20-04-2016 AMC99_RS02795 480bcd165bb0df91551e71aadd929b8c 295 PANTHER PTHR11061:SF33 273 286 7.2E-59 T 20-04-2016 AMC99_RS04495 196d2824c68a259824b89ed73379ccd5 340 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 221 317 4.3E-19 T 20-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 AMC99_RS04495 196d2824c68a259824b89ed73379ccd5 340 Gene3D G3DSA:3.20.20.70 7 319 3.4E-97 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS04495 196d2824c68a259824b89ed73379ccd5 340 TIGRFAM TIGR00433 bioB: biotin synthase 16 317 2.6E-115 T 20-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 AMC99_RS04495 196d2824c68a259824b89ed73379ccd5 340 SMART SM00729 44 256 1.7E-43 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMC99_RS04495 196d2824c68a259824b89ed73379ccd5 340 PIRSF PIRSF001619 1 325 1.7E-131 T 20-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 AMC99_RS04495 196d2824c68a259824b89ed73379ccd5 340 Hamap MF_01694 Biotin synthase [bioB]. 6 320 41.49 T 20-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 AMC99_RS04495 196d2824c68a259824b89ed73379ccd5 340 Pfam PF04055 Radical SAM superfamily 51 205 1.2E-17 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_RS04495 196d2824c68a259824b89ed73379ccd5 340 PANTHER PTHR22976 5 324 8.1E-169 T 20-04-2016 AMC99_RS04495 196d2824c68a259824b89ed73379ccd5 340 SMART SM00876 221 319 2.3E-40 T 20-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 AMC99_RS04495 196d2824c68a259824b89ed73379ccd5 340 PANTHER PTHR22976:SF19 5 324 8.1E-169 T 20-04-2016 AMC99_RS04495 196d2824c68a259824b89ed73379ccd5 340 SUPERFAMILY SSF102114 6 318 2.49E-87 T 20-04-2016 AMC99_RS08665 e52bce883e1185afebc260f575927fda 235 Pfam PF00072 Response regulator receiver domain 3 112 3.4E-28 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS08665 e52bce883e1185afebc260f575927fda 235 SMART SM00448 1 111 2.5E-40 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS08665 e52bce883e1185afebc260f575927fda 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 1.1E-20 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS08665 e52bce883e1185afebc260f575927fda 235 PANTHER PTHR26402 1 234 1.8E-95 T 20-04-2016 AMC99_RS08665 e52bce883e1185afebc260f575927fda 235 SMART SM00862 156 232 1.9E-19 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS08665 e52bce883e1185afebc260f575927fda 235 PANTHER PTHR26402:SF476 1 234 1.8E-95 T 20-04-2016 AMC99_RS08665 e52bce883e1185afebc260f575927fda 235 SUPERFAMILY SSF46894 133 233 1.22E-25 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_RS08665 e52bce883e1185afebc260f575927fda 235 Gene3D G3DSA:3.40.50.2300 3 124 6.9E-39 T 20-04-2016 AMC99_RS08665 e52bce883e1185afebc260f575927fda 235 SUPERFAMILY SSF52172 2 124 1.71E-39 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS08665 e52bce883e1185afebc260f575927fda 235 Gene3D G3DSA:1.10.10.10 134 233 4.4E-27 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS02165 a328394ba7e3638548fdd7b111bc74cc 177 Pfam PF00226 DnaJ domain 117 174 2.9E-15 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS02165 a328394ba7e3638548fdd7b111bc74cc 177 SUPERFAMILY SSF46565 80 174 7.46E-15 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS02165 a328394ba7e3638548fdd7b111bc74cc 177 PRINTS PR00625 DnaJ domain signature 151 171 5.4E-7 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS02165 a328394ba7e3638548fdd7b111bc74cc 177 PRINTS PR00625 DnaJ domain signature 134 149 5.4E-7 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS02165 a328394ba7e3638548fdd7b111bc74cc 177 PRINTS PR00625 DnaJ domain signature 116 134 5.4E-7 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS02165 a328394ba7e3638548fdd7b111bc74cc 177 Gene3D G3DSA:1.10.287.110 113 174 2.3E-13 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS02165 a328394ba7e3638548fdd7b111bc74cc 177 SMART SM00271 113 171 2.5E-16 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS08170 13d596fa73bff580389d4fdb2263fa8b 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 437 37.341 T 20-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 AMC99_RS08170 13d596fa73bff580389d4fdb2263fa8b 453 SUPERFAMILY SSF53448 4 249 2.29E-54 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS08170 13d596fa73bff580389d4fdb2263fa8b 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 388 416 - T 20-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMC99_RS08170 13d596fa73bff580389d4fdb2263fa8b 453 PANTHER PTHR22572:SF115 5 434 4.2E-162 T 20-04-2016 AMC99_RS08170 13d596fa73bff580389d4fdb2263fa8b 453 PANTHER PTHR22572 5 434 4.2E-162 T 20-04-2016 AMC99_RS08170 13d596fa73bff580389d4fdb2263fa8b 453 SUPERFAMILY SSF51161 250 420 2.26E-44 T 20-04-2016 IPR011004 Trimeric LpxA-like AMC99_RS08170 13d596fa73bff580389d4fdb2263fa8b 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 438 1.6E-146 T 20-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 AMC99_RS08170 13d596fa73bff580389d4fdb2263fa8b 453 Gene3D G3DSA:2.160.10.10 258 419 2.1E-38 T 20-04-2016 AMC99_RS08170 13d596fa73bff580389d4fdb2263fa8b 453 Gene3D G3DSA:3.90.550.10 2 251 8.1E-65 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS08170 13d596fa73bff580389d4fdb2263fa8b 453 Pfam PF12804 MobA-like NTP transferase domain 6 129 1.8E-21 T 20-04-2016 IPR025877 MobA-like NTP transferase AMC99_RS08170 13d596fa73bff580389d4fdb2263fa8b 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 380 412 1.2E-6 T 20-04-2016 IPR001451 Hexapeptide repeat AMC99_RS08170 13d596fa73bff580389d4fdb2263fa8b 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 268 301 1.5E-6 T 20-04-2016 IPR001451 Hexapeptide repeat AMC99_RS08170 13d596fa73bff580389d4fdb2263fa8b 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 302 335 8.5E-4 T 20-04-2016 IPR001451 Hexapeptide repeat AMC99_RS13295 a42194b2a87013b10704d9c18a33bbd5 378 SUPERFAMILY SSF103088 243 371 3.01E-30 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS13295 a42194b2a87013b10704d9c18a33bbd5 378 SUPERFAMILY SSF56925 116 230 1.02E-25 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMC99_RS13295 a42194b2a87013b10704d9c18a33bbd5 378 SUPERFAMILY SSF56925 23 86 1.02E-25 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMC99_RS13295 a42194b2a87013b10704d9c18a33bbd5 378 PANTHER PTHR30128 267 374 9.4E-24 T 20-04-2016 AMC99_RS13295 a42194b2a87013b10704d9c18a33bbd5 378 Gene3D G3DSA:2.40.160.20 24 230 1.4E-23 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMC99_RS13295 a42194b2a87013b10704d9c18a33bbd5 378 Pfam PF00691 OmpA family 271 366 1.1E-16 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS13295 a42194b2a87013b10704d9c18a33bbd5 378 Gene3D G3DSA:3.30.1330.60 270 371 2.2E-27 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS13295 a42194b2a87013b10704d9c18a33bbd5 378 Gene3D G3DSA:3.90.810.10 237 257 7.4E-4 T 20-04-2016 IPR000095 CRIB domain AMC99_RS13295 a42194b2a87013b10704d9c18a33bbd5 378 PRINTS PR01021 OMPA domain signature 317 333 1.3E-12 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_RS13295 a42194b2a87013b10704d9c18a33bbd5 378 PRINTS PR01021 OMPA domain signature 272 294 1.3E-12 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_RS13295 a42194b2a87013b10704d9c18a33bbd5 378 PRINTS PR01021 OMPA domain signature 302 317 1.3E-12 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_RS13295 a42194b2a87013b10704d9c18a33bbd5 378 Pfam PF13505 Outer membrane protein beta-barrel domain 10 230 2.4E-11 T 20-04-2016 IPR027385 Outer membrane protein beta-barrel AMC99_RS00010 a271129cde7b82cda0eeb5ffefe8ff32 161 Gene3D G3DSA:3.30.420.10 3 154 2.8E-50 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS00010 a271129cde7b82cda0eeb5ffefe8ff32 161 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 4.0E-43 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_RS00010 a271129cde7b82cda0eeb5ffefe8ff32 161 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 2.8E-39 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_RS00010 a271129cde7b82cda0eeb5ffefe8ff32 161 SUPERFAMILY SSF53098 3 155 6.07E-44 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS00010 a271129cde7b82cda0eeb5ffefe8ff32 161 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 154 41.604 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_RS00010 a271129cde7b82cda0eeb5ffefe8ff32 161 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 114 148 - T 20-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AMC99_RS00010 a271129cde7b82cda0eeb5ffefe8ff32 161 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 2.9E-30 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_RS00010 a271129cde7b82cda0eeb5ffefe8ff32 161 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 2.9E-30 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_RS00010 a271129cde7b82cda0eeb5ffefe8ff32 161 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 2.9E-30 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_RS00010 a271129cde7b82cda0eeb5ffefe8ff32 161 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.9E-30 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_RS00010 a271129cde7b82cda0eeb5ffefe8ff32 161 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 2.9E-30 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_RS00010 a271129cde7b82cda0eeb5ffefe8ff32 161 PANTHER PTHR30194 1 159 2.6E-53 T 20-04-2016 AMC99_RS04440 9e9850fda2d9df728057966f39df81db 259 Pfam PF09955 Predicted integral membrane protein (DUF2189) 68 191 6.3E-31 T 20-04-2016 IPR018692 Predicted integral membrane protein DUF2189 AMC99_RS11300 cc9089290e73bd309a8baae000446aad 330 Gene3D G3DSA:3.40.50.1820 15 180 2.0E-55 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS11300 cc9089290e73bd309a8baae000446aad 330 Gene3D G3DSA:3.40.50.1820 246 326 2.0E-55 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS11300 cc9089290e73bd309a8baae000446aad 330 Pfam PF00756 Putative esterase 44 320 6.4E-22 T 20-04-2016 IPR000801 Putative esterase AMC99_RS11300 cc9089290e73bd309a8baae000446aad 330 SUPERFAMILY SSF53474 41 206 7.77E-44 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS11300 cc9089290e73bd309a8baae000446aad 330 SUPERFAMILY SSF53474 250 326 7.77E-44 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS11300 cc9089290e73bd309a8baae000446aad 330 PANTHER PTHR10907:SF33 18 215 2.9E-29 T 20-04-2016 AMC99_RS11300 cc9089290e73bd309a8baae000446aad 330 PANTHER PTHR10907 18 215 2.9E-29 T 20-04-2016 AMC99_RS00335 47b1a7e410fd3b9301f966ab2c0539bf 250 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 116 226 2.1E-29 T 20-04-2016 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC AMC99_RS00335 47b1a7e410fd3b9301f966ab2c0539bf 250 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 114 234 1.9E-20 T 20-04-2016 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 517 1.7E-179 T 20-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 PRINTS PR00315 GTP-binding elongation factor signature 60 68 3.9E-12 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 PRINTS PR00315 GTP-binding elongation factor signature 140 149 3.9E-12 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 PRINTS PR00315 GTP-binding elongation factor signature 104 115 3.9E-12 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 PRINTS PR00315 GTP-binding elongation factor signature 10 23 3.9E-12 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 PRINTS PR00315 GTP-binding elongation factor signature 88 98 3.9E-12 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 PANTHER PTHR23115 241 454 1.2E-193 T 20-04-2016 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 PANTHER PTHR23115 1 187 1.2E-193 T 20-04-2016 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 Gene3D G3DSA:2.40.30.10 283 384 2.1E-19 T 20-04-2016 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 516 46.384 T 20-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 162 4.9E-25 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 Pfam PF16658 Class II release factor RF3, C-terminal domain 377 502 1.9E-42 T 20-04-2016 IPR032090 Peptide chain release factor 3, C-terminal AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 Gene3D G3DSA:3.30.70.870 385 454 7.0E-13 T 20-04-2016 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 Gene3D G3DSA:3.40.50.300 4 272 2.8E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 241 263 2.8E-11 T 20-04-2016 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 126 149 2.8E-11 T 20-04-2016 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 PANTHER PTHR23115:SF69 241 454 1.2E-193 T 20-04-2016 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 PANTHER PTHR23115:SF69 1 187 1.2E-193 T 20-04-2016 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 SUPERFAMILY SSF54980 383 453 1.76E-15 T 20-04-2016 IPR009022 Elongation factor G, III-V domain AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 SUPERFAMILY SSF50447 251 383 7.83E-25 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 Pfam PF00009 Elongation factor Tu GTP binding domain 7 267 4.2E-52 T 20-04-2016 AMC99_RS13185 4d0432e5e4a9a62b807c37b56aad4d78 518 SUPERFAMILY SSF52540 6 267 4.86E-78 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02555 d9cf8312594c95a6ecda8c0443ad34db 390 Gene3D G3DSA:2.40.30.10 177 255 3.8E-25 T 20-04-2016 AMC99_RS02555 d9cf8312594c95a6ecda8c0443ad34db 390 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 1 376 4.6E-111 T 20-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AMC99_RS02555 d9cf8312594c95a6ecda8c0443ad34db 390 PANTHER PTHR10617 1 272 4.0E-99 T 20-04-2016 AMC99_RS02555 d9cf8312594c95a6ecda8c0443ad34db 390 PANTHER PTHR10617 315 383 4.0E-99 T 20-04-2016 AMC99_RS02555 d9cf8312594c95a6ecda8c0443ad34db 390 Gene3D G3DSA:3.50.50.60 1 175 2.1E-42 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS02555 d9cf8312594c95a6ecda8c0443ad34db 390 Gene3D G3DSA:3.50.50.60 324 379 2.1E-42 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS02555 d9cf8312594c95a6ecda8c0443ad34db 390 SUPERFAMILY SSF51905 1 177 2.82E-47 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS02555 d9cf8312594c95a6ecda8c0443ad34db 390 SUPERFAMILY SSF51905 322 379 2.82E-47 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS02555 d9cf8312594c95a6ecda8c0443ad34db 390 Pfam PF03486 HI0933-like protein 1 377 2.5E-125 T 20-04-2016 AMC99_RS02555 d9cf8312594c95a6ecda8c0443ad34db 390 Gene3D G3DSA:1.10.8.260 256 304 1.4E-9 T 20-04-2016 IPR023166 HI0933 insert-like domain AMC99_RS02555 d9cf8312594c95a6ecda8c0443ad34db 390 SUPERFAMILY SSF160996 178 325 4.32E-37 T 20-04-2016 AMC99_RS02555 d9cf8312594c95a6ecda8c0443ad34db 390 PANTHER PTHR10617:SF103 1 272 4.0E-99 T 20-04-2016 AMC99_RS02555 d9cf8312594c95a6ecda8c0443ad34db 390 PANTHER PTHR10617:SF103 315 383 4.0E-99 T 20-04-2016 AMC99_RS00710 2a31dab63dd0d992512b0dae1825f099 204 SUPERFAMILY SSF50475 13 204 3.93E-61 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMC99_RS00710 2a31dab63dd0d992512b0dae1825f099 204 PANTHER PTHR10851 14 204 3.3E-92 T 20-04-2016 AMC99_RS00710 2a31dab63dd0d992512b0dae1825f099 204 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 31 110 1.4E-21 T 20-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMC99_RS00710 2a31dab63dd0d992512b0dae1825f099 204 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 2 204 34.952 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMC99_RS00710 2a31dab63dd0d992512b0dae1825f099 204 PIRSF PIRSF000190 2 204 2.8E-72 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMC99_RS00710 2a31dab63dd0d992512b0dae1825f099 204 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 14 202 4.9E-70 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMC99_RS00710 2a31dab63dd0d992512b0dae1825f099 204 Gene3D G3DSA:2.30.110.10 14 204 3.8E-73 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMC99_RS00710 2a31dab63dd0d992512b0dae1825f099 204 PANTHER PTHR10851:SF0 14 204 3.3E-92 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMC99_RS00710 2a31dab63dd0d992512b0dae1825f099 204 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 163 204 2.3E-14 T 20-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMC99_RS11590 e221f49596aef591afb893cd9180209e 410 Gene3D G3DSA:3.40.50.2000 183 374 1.2E-24 T 20-04-2016 AMC99_RS11590 e221f49596aef591afb893cd9180209e 410 Pfam PF13579 Glycosyl transferase 4-like domain 16 189 4.9E-27 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMC99_RS11590 e221f49596aef591afb893cd9180209e 410 PANTHER PTHR12526 2 408 4.9E-61 T 20-04-2016 AMC99_RS11590 e221f49596aef591afb893cd9180209e 410 Pfam PF13692 Glycosyl transferases group 1 216 361 3.2E-27 T 20-04-2016 AMC99_RS11590 e221f49596aef591afb893cd9180209e 410 TIGRFAM TIGR04063 stp3: PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family 3 398 5.2E-182 T 20-04-2016 IPR024004 Glycosyltransferase family 1, Daro2409 family AMC99_RS11590 e221f49596aef591afb893cd9180209e 410 SUPERFAMILY SSF53756 2 400 4.32E-73 T 20-04-2016 AMC99_RS08060 9f2b6d08a600c95953a71f8dd1410aa8 217 PANTHER PTHR10683 1 211 7.1E-76 T 20-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMC99_RS08060 9f2b6d08a600c95953a71f8dd1410aa8 217 Pfam PF00923 Transaldolase 3 210 5.7E-58 T 20-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMC99_RS08060 9f2b6d08a600c95953a71f8dd1410aa8 217 Hamap MF_00494 Probable transaldolase [tal]. 1 214 45.071 T 20-04-2016 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMC99_RS08060 9f2b6d08a600c95953a71f8dd1410aa8 217 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 211 1.1E-89 T 20-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMC99_RS08060 9f2b6d08a600c95953a71f8dd1410aa8 217 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 20-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMC99_RS08060 9f2b6d08a600c95953a71f8dd1410aa8 217 SUPERFAMILY SSF51569 1 214 1.26E-78 T 20-04-2016 AMC99_RS08060 9f2b6d08a600c95953a71f8dd1410aa8 217 Gene3D G3DSA:3.20.20.70 1 214 2.0E-72 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS04235 5a735ef7c03adbf3ec068be5d56d29ed 365 PANTHER PTHR10520 8 341 7.3E-194 T 20-04-2016 AMC99_RS04235 5a735ef7c03adbf3ec068be5d56d29ed 365 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 9 339 1.7E-131 T 20-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS04235 5a735ef7c03adbf3ec068be5d56d29ed 365 Gene3D G3DSA:3.90.650.10 174 344 1.0E-64 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMC99_RS04235 5a735ef7c03adbf3ec068be5d56d29ed 365 SUPERFAMILY SSF55326 8 170 6.73E-48 T 20-04-2016 AMC99_RS04235 5a735ef7c03adbf3ec068be5d56d29ed 365 SUPERFAMILY SSF56042 173 345 6.8E-57 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMC99_RS04235 5a735ef7c03adbf3ec068be5d56d29ed 365 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 349 44.151 T 20-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMC99_RS04235 5a735ef7c03adbf3ec068be5d56d29ed 365 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 342 2.5E-35 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMC99_RS04235 5a735ef7c03adbf3ec068be5d56d29ed 365 Pfam PF00586 AIR synthase related protein, N-terminal domain 63 166 5.6E-16 T 20-04-2016 IPR016188 PurM-like, N-terminal domain AMC99_RS04235 5a735ef7c03adbf3ec068be5d56d29ed 365 Gene3D G3DSA:3.30.1330.10 23 170 1.9E-60 T 20-04-2016 IPR016188 PurM-like, N-terminal domain AMC99_RS12370 211349d26d9d1f66631eaeb9761c7997 234 PANTHER PTHR30231:SF0 1 228 9.3E-80 T 20-04-2016 AMC99_RS12370 211349d26d9d1f66631eaeb9761c7997 234 Pfam PF00929 Exonuclease 4 163 3.5E-32 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMC99_RS12370 211349d26d9d1f66631eaeb9761c7997 234 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 170 1.1E-48 T 20-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS12370 211349d26d9d1f66631eaeb9761c7997 234 SUPERFAMILY SSF53098 1 168 1.95E-53 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS12370 211349d26d9d1f66631eaeb9761c7997 234 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 232 2.9E-80 T 20-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS12370 211349d26d9d1f66631eaeb9761c7997 234 PANTHER PTHR30231 1 228 9.3E-80 T 20-04-2016 AMC99_RS12370 211349d26d9d1f66631eaeb9761c7997 234 SMART SM00479 2 172 1.6E-44 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMC99_RS12370 211349d26d9d1f66631eaeb9761c7997 234 Gene3D G3DSA:3.30.420.10 1 171 1.4E-61 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS05500 3441b34e54d6afcfc61ff885f726ba82 471 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 97 284 8.2E-26 T 20-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMC99_RS05500 3441b34e54d6afcfc61ff885f726ba82 471 Gene3D G3DSA:1.10.287.950 53 254 2.4E-38 T 20-04-2016 AMC99_RS05500 3441b34e54d6afcfc61ff885f726ba82 471 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 129 156 4.3E-15 T 20-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMC99_RS05500 3441b34e54d6afcfc61ff885f726ba82 471 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 206 235 4.3E-15 T 20-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMC99_RS05500 3441b34e54d6afcfc61ff885f726ba82 471 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 158 187 4.3E-15 T 20-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMC99_RS05500 3441b34e54d6afcfc61ff885f726ba82 471 PANTHER PTHR32089 57 284 2.2E-27 T 20-04-2016 AMC99_RS05500 3441b34e54d6afcfc61ff885f726ba82 471 SUPERFAMILY SSF58104 15 288 6.02E-41 T 20-04-2016 AMC99_RS05500 3441b34e54d6afcfc61ff885f726ba82 471 SMART SM00283 31 290 4.6E-14 T 20-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMC99_RS05075 7d1e5fe10e025e257b8d7e925b6481d4 581 Gene3D G3DSA:3.40.50.1220 193 352 1.0E-61 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMC99_RS05075 7d1e5fe10e025e257b8d7e925b6481d4 581 SUPERFAMILY SSF52518 4 171 2.0E-63 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS05075 7d1e5fe10e025e257b8d7e925b6481d4 581 SUPERFAMILY SSF52467 192 360 8.55E-63 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMC99_RS05075 7d1e5fe10e025e257b8d7e925b6481d4 581 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 541 7.5E-50 T 20-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMC99_RS05075 7d1e5fe10e025e257b8d7e925b6481d4 581 Gene3D G3DSA:3.40.50.970 4 169 1.8E-74 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS05075 7d1e5fe10e025e257b8d7e925b6481d4 581 PANTHER PTHR18968 3 564 2.1E-302 T 20-04-2016 AMC99_RS05075 7d1e5fe10e025e257b8d7e925b6481d4 581 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 332 1.3E-44 T 20-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMC99_RS05075 7d1e5fe10e025e257b8d7e925b6481d4 581 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 6 563 2.9E-237 T 20-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS05075 7d1e5fe10e025e257b8d7e925b6481d4 581 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 167 1.3E-60 T 20-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMC99_RS05075 7d1e5fe10e025e257b8d7e925b6481d4 581 SUPERFAMILY SSF52518 371 573 9.47E-68 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS05075 7d1e5fe10e025e257b8d7e925b6481d4 581 Gene3D G3DSA:3.40.50.970 353 556 1.0E-72 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS05075 7d1e5fe10e025e257b8d7e925b6481d4 581 PANTHER PTHR18968:SF116 3 564 2.1E-302 T 20-04-2016 AMC99_RS08460 8a9984f95978ab8c2370125ed36b5cea 416 Pfam PF13439 Glycosyltransferase Family 4 52 223 2.1E-10 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMC99_RS08460 8a9984f95978ab8c2370125ed36b5cea 416 PANTHER PTHR12526 14 102 4.3E-22 T 20-04-2016 AMC99_RS08460 8a9984f95978ab8c2370125ed36b5cea 416 PANTHER PTHR12526 128 415 4.3E-22 T 20-04-2016 AMC99_RS08460 8a9984f95978ab8c2370125ed36b5cea 416 Gene3D G3DSA:3.40.50.2000 238 381 1.2E-10 T 20-04-2016 AMC99_RS08460 8a9984f95978ab8c2370125ed36b5cea 416 SUPERFAMILY SSF53756 39 412 5.23E-42 T 20-04-2016 AMC99_RS08460 8a9984f95978ab8c2370125ed36b5cea 416 Pfam PF13692 Glycosyl transferases group 1 237 381 1.2E-15 T 20-04-2016 AMC99_RS02310 794f58e24b354fc5a1e15927091299da 532 Gene3D G3DSA:3.40.50.1820 27 525 4.1E-135 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS02310 794f58e24b354fc5a1e15927091299da 532 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 119 129 - T 20-04-2016 IPR019819 Carboxylesterase type B, conserved site AMC99_RS02310 794f58e24b354fc5a1e15927091299da 532 SUPERFAMILY SSF53474 28 525 3.44E-115 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS02310 794f58e24b354fc5a1e15927091299da 532 PANTHER PTHR11559 7 527 6.6E-144 T 20-04-2016 AMC99_RS02310 794f58e24b354fc5a1e15927091299da 532 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 218 233 - T 20-04-2016 IPR019826 Carboxylesterase type B, active site AMC99_RS02310 794f58e24b354fc5a1e15927091299da 532 Pfam PF00135 Carboxylesterase family 28 519 1.9E-105 T 20-04-2016 IPR002018 Carboxylesterase, type B AMC99_RS06680 20313f56aa9c659dca521296f217a6b8 223 ProDom PD111187 AF1681 5 221 2.0E-8 T 20-04-2016 AMC99_RS06800 2b70160c59e5820220a0626e7fea9205 208 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 7.3E-21 T 20-04-2016 IPR020070 Ribosomal protein L9, N-terminal AMC99_RS06800 2b70160c59e5820220a0626e7fea9205 208 SUPERFAMILY SSF55653 56 147 3.27E-24 T 20-04-2016 IPR020069 Ribosomal protein L9, C-terminal AMC99_RS06800 2b70160c59e5820220a0626e7fea9205 208 SUPERFAMILY SSF55658 1 57 9.77E-18 T 20-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AMC99_RS06800 2b70160c59e5820220a0626e7fea9205 208 Gene3D G3DSA:3.10.430.100 62 146 1.4E-22 T 20-04-2016 IPR020069 Ribosomal protein L9, C-terminal AMC99_RS06800 2b70160c59e5820220a0626e7fea9205 208 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 20-04-2016 IPR020070 Ribosomal protein L9, N-terminal AMC99_RS06800 2b70160c59e5820220a0626e7fea9205 208 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 23.713 T 20-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06800 2b70160c59e5820220a0626e7fea9205 208 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 6.8E-36 T 20-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06800 2b70160c59e5820220a0626e7fea9205 208 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 5.6E-22 T 20-04-2016 IPR020069 Ribosomal protein L9, C-terminal AMC99_RS06800 2b70160c59e5820220a0626e7fea9205 208 PANTHER PTHR21368 1 165 1.8E-42 T 20-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06800 2b70160c59e5820220a0626e7fea9205 208 Gene3D G3DSA:3.40.5.10 1 51 1.5E-23 T 20-04-2016 IPR020070 Ribosomal protein L9, N-terminal AMC99_RS08685 0ab363d69269f6b76ec079250239993d 141 Pfam PF03610 PTS system fructose IIA component 3 115 2.9E-30 T 20-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMC99_RS08685 0ab363d69269f6b76ec079250239993d 141 SUPERFAMILY SSF53062 1 130 4.06E-39 T 20-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMC99_RS08685 0ab363d69269f6b76ec079250239993d 141 Gene3D G3DSA:3.40.50.510 1 132 1.9E-43 T 20-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMC99_RS08685 0ab363d69269f6b76ec079250239993d 141 PANTHER PTHR33799 2 132 3.6E-41 T 20-04-2016 AMC99_RS12565 ad3b4ff5e8641582b497656ead1b8ee8 530 Pfam PF04679 ATP dependent DNA ligase C terminal region 419 513 4.8E-12 T 20-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 AMC99_RS12565 ad3b4ff5e8641582b497656ead1b8ee8 530 PANTHER PTHR10459:SF10 108 530 8.3E-70 T 20-04-2016 AMC99_RS12565 ad3b4ff5e8641582b497656ead1b8ee8 530 Pfam PF01068 ATP dependent DNA ligase domain 203 398 2.6E-33 T 20-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 AMC99_RS12565 ad3b4ff5e8641582b497656ead1b8ee8 530 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 3 528 2.7E-241 T 20-04-2016 IPR026333 ATP-dependent DNA ligase, PP_1105 family AMC99_RS12565 ad3b4ff5e8641582b497656ead1b8ee8 530 Gene3D G3DSA:3.30.470.30 226 343 6.7E-26 T 20-04-2016 AMC99_RS12565 ad3b4ff5e8641582b497656ead1b8ee8 530 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 221 229 - T 20-04-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 AMC99_RS12565 ad3b4ff5e8641582b497656ead1b8ee8 530 Gene3D G3DSA:3.30.1490.70 355 399 5.9E-19 T 20-04-2016 AMC99_RS12565 ad3b4ff5e8641582b497656ead1b8ee8 530 Gene3D G3DSA:3.30.1490.70 196 225 5.9E-19 T 20-04-2016 AMC99_RS12565 ad3b4ff5e8641582b497656ead1b8ee8 530 SUPERFAMILY SSF56091 197 398 1.14E-53 T 20-04-2016 AMC99_RS12565 ad3b4ff5e8641582b497656ead1b8ee8 530 SUPERFAMILY SSF50249 405 528 5.48E-32 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS12565 ad3b4ff5e8641582b497656ead1b8ee8 530 Pfam PF04675 DNA ligase N terminus 3 155 3.3E-5 T 20-04-2016 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 AMC99_RS12565 ad3b4ff5e8641582b497656ead1b8ee8 530 PANTHER PTHR10459 108 530 8.3E-70 T 20-04-2016 AMC99_RS12565 ad3b4ff5e8641582b497656ead1b8ee8 530 Gene3D G3DSA:2.40.50.140 404 529 3.3E-36 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS02960 f03e6d6b8679e523b4498aa7a0c19c50 148 PANTHER PTHR30204:SF0 1 137 3.6E-52 T 20-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AMC99_RS02960 f03e6d6b8679e523b4498aa7a0c19c50 148 Gene3D G3DSA:1.10.1660.10 61 137 2.3E-14 T 20-04-2016 AMC99_RS02960 f03e6d6b8679e523b4498aa7a0c19c50 148 SMART SM00422 7 75 8.7E-24 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_RS02960 f03e6d6b8679e523b4498aa7a0c19c50 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 8 19 2.6E-14 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_RS02960 f03e6d6b8679e523b4498aa7a0c19c50 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 19 32 2.6E-14 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_RS02960 f03e6d6b8679e523b4498aa7a0c19c50 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 42 62 2.6E-14 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_RS02960 f03e6d6b8679e523b4498aa7a0c19c50 148 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 7 144 3.3E-54 T 20-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AMC99_RS02960 f03e6d6b8679e523b4498aa7a0c19c50 148 Gene3D G3DSA:1.10.1660.10 4 60 4.8E-23 T 20-04-2016 AMC99_RS02960 f03e6d6b8679e523b4498aa7a0c19c50 148 ProSitePatterns PS00552 MerR-type HTH domain signature. 10 32 - T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_RS02960 f03e6d6b8679e523b4498aa7a0c19c50 148 Pfam PF13411 MerR HTH family regulatory protein 8 73 3.1E-16 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_RS02960 f03e6d6b8679e523b4498aa7a0c19c50 148 PANTHER PTHR30204 1 137 3.6E-52 T 20-04-2016 AMC99_RS02960 f03e6d6b8679e523b4498aa7a0c19c50 148 SUPERFAMILY SSF46955 7 129 6.59E-28 T 20-04-2016 IPR009061 Putative DNA-binding domain AMC99_RS04575 321a4f082a3e6acbc730467c5ab47780 163 Pfam PF01814 Hemerythrin HHE cation binding domain 7 122 8.8E-16 T 20-04-2016 IPR012312 Haemerythrin-like AMC99_RS04575 321a4f082a3e6acbc730467c5ab47780 163 PANTHER PTHR35585 1 146 8.4E-17 T 20-04-2016 AMC99_RS04575 321a4f082a3e6acbc730467c5ab47780 163 Gene3D G3DSA:1.20.120.520 5 144 3.5E-13 T 20-04-2016 AMC99_RS00185 16b7ae946d2f3d5f10c69bfe2a6cf07f 295 SUPERFAMILY SSF102405 87 294 9.46E-35 T 20-04-2016 AMC99_RS00185 16b7ae946d2f3d5f10c69bfe2a6cf07f 295 Pfam PF02481 DNA recombination-mediator protein A 77 285 1.6E-65 T 20-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 AMC99_RS00185 16b7ae946d2f3d5f10c69bfe2a6cf07f 295 Gene3D G3DSA:3.40.50.450 113 281 5.2E-17 T 20-04-2016 AMC99_RS00185 16b7ae946d2f3d5f10c69bfe2a6cf07f 295 PANTHER PTHR32039 87 261 3.4E-39 T 20-04-2016 AMC99_RS00185 16b7ae946d2f3d5f10c69bfe2a6cf07f 295 PANTHER PTHR32039:SF8 87 261 3.4E-39 T 20-04-2016 AMC99_RS13210 09f90750ef1777330c8213a0bb842e01 440 TIGRFAM TIGR00836 amt: ammonium transporter 39 439 2.1E-133 T 20-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AMC99_RS13210 09f90750ef1777330c8213a0bb842e01 440 PANTHER PTHR11730 11 440 1.1E-179 T 20-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AMC99_RS13210 09f90750ef1777330c8213a0bb842e01 440 ProSitePatterns PS01219 Ammonium transporters signature. 196 221 - T 20-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AMC99_RS13210 09f90750ef1777330c8213a0bb842e01 440 Gene3D G3DSA:1.10.3430.10 34 420 1.6E-138 T 20-04-2016 IPR029020 Ammonium/urea transporter AMC99_RS13210 09f90750ef1777330c8213a0bb842e01 440 SUPERFAMILY SSF111352 35 420 3.01E-126 T 20-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AMC99_RS13210 09f90750ef1777330c8213a0bb842e01 440 Pfam PF00909 Ammonium Transporter Family 41 439 3.3E-118 T 20-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AMC99_RS13210 09f90750ef1777330c8213a0bb842e01 440 PANTHER PTHR11730:SF17 11 440 1.1E-179 T 20-04-2016 AMC99_RS13210 09f90750ef1777330c8213a0bb842e01 440 PRINTS PR00342 Rhesus blood group protein signature 266 288 6.9E-7 T 20-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AMC99_RS13210 09f90750ef1777330c8213a0bb842e01 440 PRINTS PR00342 Rhesus blood group protein signature 235 253 6.9E-7 T 20-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AMC99_RS13210 09f90750ef1777330c8213a0bb842e01 440 PRINTS PR00342 Rhesus blood group protein signature 139 155 6.9E-7 T 20-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AMC99_RS13210 09f90750ef1777330c8213a0bb842e01 440 PRINTS PR00342 Rhesus blood group protein signature 321 339 6.9E-7 T 20-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AMC99_RS08120 f3989f1a11522f917c792b8cda4840ba 509 Gene3D G3DSA:2.40.30.20 1 92 5.1E-40 T 20-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08120 f3989f1a11522f917c792b8cda4840ba 509 Gene3D G3DSA:1.20.150.20 380 508 3.2E-58 T 20-04-2016 AMC99_RS08120 f3989f1a11522f917c792b8cda4840ba 509 SUPERFAMILY SSF47917 380 508 3.4E-50 T 20-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08120 f3989f1a11522f917c792b8cda4840ba 509 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 20-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08120 f3989f1a11522f917c792b8cda4840ba 509 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 509 1.5E-255 T 20-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08120 f3989f1a11522f917c792b8cda4840ba 509 SUPERFAMILY SSF52540 96 378 1.55E-99 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08120 f3989f1a11522f917c792b8cda4840ba 509 PANTHER PTHR15184:SF3 1 493 0.0 T 20-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08120 f3989f1a11522f917c792b8cda4840ba 509 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 8.9E-18 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08120 f3989f1a11522f917c792b8cda4840ba 509 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 509 51.915 T 20-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08120 f3989f1a11522f917c792b8cda4840ba 509 PIRSF PIRSF039088 1 509 2.6E-282 T 20-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08120 f3989f1a11522f917c792b8cda4840ba 509 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 372 2.2E-74 T 20-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08120 f3989f1a11522f917c792b8cda4840ba 509 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 379 504 2.5E-51 T 20-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS08120 f3989f1a11522f917c792b8cda4840ba 509 PANTHER PTHR15184 1 493 0.0 T 20-04-2016 AMC99_RS08120 f3989f1a11522f917c792b8cda4840ba 509 Gene3D G3DSA:3.40.50.300 94 379 4.5E-125 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08120 f3989f1a11522f917c792b8cda4840ba 509 SUPERFAMILY SSF50615 10 94 1.2E-29 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMC99_RS12665 a6e60b31b3667e7cbe1a492c566ca134 337 Gene3D G3DSA:3.40.50.720 1 184 8.9E-50 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12665 a6e60b31b3667e7cbe1a492c566ca134 337 PANTHER PTHR10366 3 337 1.7E-145 T 20-04-2016 AMC99_RS12665 a6e60b31b3667e7cbe1a492c566ca134 337 Gene3D G3DSA:3.90.25.10 185 334 5.6E-29 T 20-04-2016 AMC99_RS12665 a6e60b31b3667e7cbe1a492c566ca134 337 PRINTS PR01713 Nucleotide sugar epimerase signature 30 46 1.5E-19 T 20-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AMC99_RS12665 a6e60b31b3667e7cbe1a492c566ca134 337 PRINTS PR01713 Nucleotide sugar epimerase signature 297 314 1.5E-19 T 20-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AMC99_RS12665 a6e60b31b3667e7cbe1a492c566ca134 337 PRINTS PR01713 Nucleotide sugar epimerase signature 217 232 1.5E-19 T 20-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AMC99_RS12665 a6e60b31b3667e7cbe1a492c566ca134 337 PRINTS PR01713 Nucleotide sugar epimerase signature 258 273 1.5E-19 T 20-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AMC99_RS12665 a6e60b31b3667e7cbe1a492c566ca134 337 SUPERFAMILY SSF51735 1 335 1.55E-85 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12665 a6e60b31b3667e7cbe1a492c566ca134 337 PANTHER PTHR10366:SF77 3 337 1.7E-145 T 20-04-2016 AMC99_RS12665 a6e60b31b3667e7cbe1a492c566ca134 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 326 6.4E-54 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS04180 78426eef33d19454e71d7fb632656275 275 Gene3D G3DSA:1.10.8.100 213 272 1.0E-21 T 20-04-2016 IPR023165 rRNA adenine dimethylase-like AMC99_RS04180 78426eef33d19454e71d7fb632656275 275 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 17 271 7.0E-70 T 20-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AMC99_RS04180 78426eef33d19454e71d7fb632656275 275 Pfam PF00398 Ribosomal RNA adenine dimethylase 18 272 4.5E-45 T 20-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMC99_RS04180 78426eef33d19454e71d7fb632656275 275 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 48 75 - T 20-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AMC99_RS04180 78426eef33d19454e71d7fb632656275 275 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 16 273 49.647 T 20-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AMC99_RS04180 78426eef33d19454e71d7fb632656275 275 PANTHER PTHR11727 4 274 4.4E-90 T 20-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMC99_RS04180 78426eef33d19454e71d7fb632656275 275 SMART SM00650 32 207 5.4E-66 T 20-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AMC99_RS04180 78426eef33d19454e71d7fb632656275 275 SUPERFAMILY SSF53335 12 272 1.14E-68 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS04180 78426eef33d19454e71d7fb632656275 275 Gene3D G3DSA:3.40.50.150 4 206 3.0E-63 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS07980 f3b0d660a52debd55cafda882e4d0d5a 98 SUPERFAMILY SSF47729 7 96 2.94E-26 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMC99_RS07980 f3b0d660a52debd55cafda882e4d0d5a 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 5 98 26.675 T 20-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 AMC99_RS07980 f3b0d660a52debd55cafda882e4d0d5a 98 SMART SM00411 7 96 6.3E-30 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_RS07980 f3b0d660a52debd55cafda882e4d0d5a 98 PANTHER PTHR33175 7 95 2.3E-41 T 20-04-2016 AMC99_RS07980 f3b0d660a52debd55cafda882e4d0d5a 98 PRINTS PR01727 Prokaryotic integration host factor signature 64 77 6.4E-13 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_RS07980 f3b0d660a52debd55cafda882e4d0d5a 98 PRINTS PR01727 Prokaryotic integration host factor signature 46 61 6.4E-13 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_RS07980 f3b0d660a52debd55cafda882e4d0d5a 98 PRINTS PR01727 Prokaryotic integration host factor signature 80 94 6.4E-13 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_RS07980 f3b0d660a52debd55cafda882e4d0d5a 98 Gene3D G3DSA:4.10.520.10 6 97 2.0E-29 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMC99_RS07980 f3b0d660a52debd55cafda882e4d0d5a 98 Pfam PF00216 Bacterial DNA-binding protein 7 95 3.8E-25 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_RS07980 f3b0d660a52debd55cafda882e4d0d5a 98 PANTHER PTHR33175:SF2 7 95 2.3E-41 T 20-04-2016 AMC99_RS07980 f3b0d660a52debd55cafda882e4d0d5a 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 52 71 - T 20-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMC99_RS07980 f3b0d660a52debd55cafda882e4d0d5a 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 6 97 3.0E-38 T 20-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 AMC99_RS00220 4f64708f7ee0671131da201ddc869e4d 311 Pfam PF10686 Protein of unknown function (DUF2493) 182 255 1.1E-22 T 20-04-2016 IPR019627 Mycobacteriophage D29, Gp61 AMC99_RS09770 e437cf233b31ad6953f0fe43e1989af6 232 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 112 123 - T 20-04-2016 IPR018215 ClpP, Ser active site AMC99_RS09770 e437cf233b31ad6953f0fe43e1989af6 232 Pfam PF00574 Clp protease 35 214 4.6E-84 T 20-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMC99_RS09770 e437cf233b31ad6953f0fe43e1989af6 232 SUPERFAMILY SSF52096 32 216 2.13E-71 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS09770 e437cf233b31ad6953f0fe43e1989af6 232 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 25 215 41.574 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMC99_RS09770 e437cf233b31ad6953f0fe43e1989af6 232 PANTHER PTHR10381 25 222 2.9E-133 T 20-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMC99_RS09770 e437cf233b31ad6953f0fe43e1989af6 232 Gene3D G3DSA:3.90.226.10 33 219 2.4E-84 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS09770 e437cf233b31ad6953f0fe43e1989af6 232 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 134 147 - T 20-04-2016 IPR033135 ClpP, histidine active site AMC99_RS09770 e437cf233b31ad6953f0fe43e1989af6 232 PANTHER PTHR10381:SF11 25 222 2.9E-133 T 20-04-2016 AMC99_RS09770 e437cf233b31ad6953f0fe43e1989af6 232 PRINTS PR00127 Clp protease catalytic subunit P signature 81 101 3.2E-48 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMC99_RS09770 e437cf233b31ad6953f0fe43e1989af6 232 PRINTS PR00127 Clp protease catalytic subunit P signature 190 209 3.2E-48 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMC99_RS09770 e437cf233b31ad6953f0fe43e1989af6 232 PRINTS PR00127 Clp protease catalytic subunit P signature 112 129 3.2E-48 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMC99_RS09770 e437cf233b31ad6953f0fe43e1989af6 232 PRINTS PR00127 Clp protease catalytic subunit P signature 133 152 3.2E-48 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMC99_RS09770 e437cf233b31ad6953f0fe43e1989af6 232 PRINTS PR00127 Clp protease catalytic subunit P signature 41 56 3.2E-48 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMC99_RS11710 4b330a023a242d75daa5608465138f66 226 Gene3D G3DSA:2.70.70.10 71 205 5.3E-52 T 20-04-2016 AMC99_RS11710 4b330a023a242d75daa5608465138f66 226 Pfam PF01551 Peptidase family M23 107 201 4.2E-35 T 20-04-2016 IPR016047 Peptidase M23 AMC99_RS11710 4b330a023a242d75daa5608465138f66 226 PANTHER PTHR21666 82 205 5.6E-51 T 20-04-2016 AMC99_RS11710 4b330a023a242d75daa5608465138f66 226 SUPERFAMILY SSF51261 64 205 1.2E-59 T 20-04-2016 IPR011055 Duplicated hybrid motif AMC99_RS04320 2acaed20277b26face4b0ebbcd2955a2 318 PANTHER PTHR10314:SF36 2 318 1.7E-78 T 20-04-2016 AMC99_RS04320 2acaed20277b26face4b0ebbcd2955a2 318 SUPERFAMILY SSF53686 12 308 1.96E-75 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_RS04320 2acaed20277b26face4b0ebbcd2955a2 318 PANTHER PTHR10314 2 318 1.7E-78 T 20-04-2016 AMC99_RS04320 2acaed20277b26face4b0ebbcd2955a2 318 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 26 303 6.7E-67 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_RS04320 2acaed20277b26face4b0ebbcd2955a2 318 Gene3D G3DSA:3.40.50.1100 71 315 4.7E-57 T 20-04-2016 AMC99_RS05825 5f42b9027feb105ece60ef66366f409e 235 Pfam PF01936 NYN domain 9 142 1.7E-31 T 20-04-2016 IPR021139 NYN domain, limkain-b1-type AMC99_RS05825 5f42b9027feb105ece60ef66366f409e 235 Pfam PF12872 OST-HTH/LOTUS domain 161 231 1.6E-11 T 20-04-2016 IPR025605 OST-HTH/LOTUS domain AMC99_RS05825 5f42b9027feb105ece60ef66366f409e 235 PANTHER PTHR35811:SF1 1 235 3.4E-43 T 20-04-2016 AMC99_RS05825 5f42b9027feb105ece60ef66366f409e 235 Gene3D G3DSA:3.40.50.1010 5 146 1.7E-27 T 20-04-2016 IPR029060 PIN domain-like AMC99_RS05825 5f42b9027feb105ece60ef66366f409e 235 PANTHER PTHR35811 1 235 3.4E-43 T 20-04-2016 AMC99_RS02105 bcfc886ceb0927ad017a6dfc72d7e634 243 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 238 35.424 T 20-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 AMC99_RS02105 bcfc886ceb0927ad017a6dfc72d7e634 243 PANTHER PTHR21235:SF15 1 238 1.6E-93 T 20-04-2016 AMC99_RS02105 bcfc886ceb0927ad017a6dfc72d7e634 243 Pfam PF00977 Histidine biosynthesis protein 3 230 1.9E-72 T 20-04-2016 IPR006062 Histidine biosynthesis GO:0000105 AMC99_RS02105 bcfc886ceb0927ad017a6dfc72d7e634 243 Gene3D G3DSA:3.20.20.70 3 237 3.9E-78 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS02105 bcfc886ceb0927ad017a6dfc72d7e634 243 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 234 8.1E-77 T 20-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 AMC99_RS02105 bcfc886ceb0927ad017a6dfc72d7e634 243 SUPERFAMILY SSF51366 2 236 1.73E-69 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMC99_RS02105 bcfc886ceb0927ad017a6dfc72d7e634 243 PANTHER PTHR21235 1 238 1.6E-93 T 20-04-2016 AMC99_RS02285 1a9329cd12d6db1d3e0c258757bed681 196 SUPERFAMILY SSF46689 5 72 2.74E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS02285 1a9329cd12d6db1d3e0c258757bed681 196 PANTHER PTHR30055:SF47 1 193 3.7E-12 T 20-04-2016 AMC99_RS02285 1a9329cd12d6db1d3e0c258757bed681 196 PANTHER PTHR30055 1 193 3.7E-12 T 20-04-2016 AMC99_RS02285 1a9329cd12d6db1d3e0c258757bed681 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 53 1.3E-6 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS02285 1a9329cd12d6db1d3e0c258757bed681 196 Gene3D G3DSA:1.10.357.10 2 188 2.4E-22 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 SUPERFAMILY SSF50249 611 696 9.42E-23 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 696 29.862 T 20-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 SUPERFAMILY SSF55666 453 551 4.45E-27 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 Gene3D G3DSA:2.40.50.140 629 706 9.3E-27 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 SMART SM00316 623 693 3.1E-25 T 20-04-2016 IPR022967 RNA-binding domain, S1 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 323 2.1E-15 T 20-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 Pfam PF01138 3' exoribonuclease family, domain 1 326 459 7.4E-20 T 20-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 1.4E-21 T 20-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 SUPERFAMILY SSF54211 5 144 3.44E-50 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 Gene3D G3DSA:3.30.1370.10 554 628 1.8E-24 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 694 0.0 T 20-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 Pfam PF00575 S1 RNA binding domain 622 693 8.9E-20 T 20-04-2016 IPR003029 S1 domain GO:0003676 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 PIRSF PIRSF005499 1 723 4.8E-290 T 20-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 SUPERFAMILY SSF54211 306 495 1.01E-47 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 SUPERFAMILY SSF54791 555 632 7.17E-18 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 SUPERFAMILY SSF55666 145 236 7.07E-24 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 SMART SM00322 555 620 2.1E-12 T 20-04-2016 IPR004087 K Homology domain GO:0003676 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 Pfam PF00013 KH domain 559 616 2.1E-10 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 SUPERFAMILY SSF46915 229 329 1.7E-20 T 20-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 Gene3D G3DSA:3.30.230.70 6 227 2.4E-81 T 20-04-2016 IPR027408 PNPase/RNase PH domain AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 Gene3D G3DSA:3.30.230.70 318 544 4.9E-85 T 20-04-2016 IPR027408 PNPase/RNase PH domain AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 PANTHER PTHR11252:SF0 1 727 0.0 T 20-04-2016 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 PANTHER PTHR11252 1 727 0.0 T 20-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 Gene3D G3DSA:1.10.10.400 229 317 8.1E-21 T 20-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 Pfam PF03725 3' exoribonuclease family, domain 2 463 531 2.4E-6 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMC99_RS03600 e9f8d83bf556c97ee741526a283424bd 762 Pfam PF03725 3' exoribonuclease family, domain 2 147 212 2.5E-10 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMC99_RS12520 eb192dd1a9a2eb0c6609077cc8328958 96 Gene3D G3DSA:3.10.290.10 1 87 1.1E-19 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS12520 eb192dd1a9a2eb0c6609077cc8328958 96 Pfam PF01479 S4 domain 1 47 3.1E-11 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS12520 eb192dd1a9a2eb0c6609077cc8328958 96 SUPERFAMILY SSF55174 1 84 4.97E-15 T 20-04-2016 AMC99_RS12520 eb192dd1a9a2eb0c6609077cc8328958 96 SMART SM00363 1 65 1.3E-8 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS01115 c107f256d620ee960d81a38faab710c1 411 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 3.8E-31 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01115 c107f256d620ee960d81a38faab710c1 411 PRINTS PR00173 Glutamate-aspartate symporter signature 186 205 3.8E-31 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01115 c107f256d620ee960d81a38faab710c1 411 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 3.8E-31 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01115 c107f256d620ee960d81a38faab710c1 411 PRINTS PR00173 Glutamate-aspartate symporter signature 288 314 3.8E-31 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01115 c107f256d620ee960d81a38faab710c1 411 PRINTS PR00173 Glutamate-aspartate symporter signature 323 342 3.8E-31 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01115 c107f256d620ee960d81a38faab710c1 411 PRINTS PR00173 Glutamate-aspartate symporter signature 350 370 3.8E-31 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01115 c107f256d620ee960d81a38faab710c1 411 SUPERFAMILY SSF118215 9 395 3.92E-111 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01115 c107f256d620ee960d81a38faab710c1 411 PANTHER PTHR11958 1 402 2.8E-139 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01115 c107f256d620ee960d81a38faab710c1 411 Gene3D G3DSA:1.10.3860.10 3 401 7.2E-123 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01115 c107f256d620ee960d81a38faab710c1 411 PANTHER PTHR11958:SF59 1 402 2.8E-139 T 20-04-2016 AMC99_RS01115 c107f256d620ee960d81a38faab710c1 411 Pfam PF00375 Sodium:dicarboxylate symporter family 9 395 3.7E-124 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS12970 7119031388567cfb089790b2876c3dc7 335 SUPERFAMILY SSF53383 6 331 3.52E-83 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS12970 7119031388567cfb089790b2876c3dc7 335 PANTHER PTHR10289:SF8 7 335 5.7E-89 T 20-04-2016 AMC99_RS12970 7119031388567cfb089790b2876c3dc7 335 Pfam PF01212 Beta-eliminating lyase 7 289 1.1E-49 T 20-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 AMC99_RS12970 7119031388567cfb089790b2876c3dc7 335 PANTHER PTHR10289 7 335 5.7E-89 T 20-04-2016 AMC99_RS12970 7119031388567cfb089790b2876c3dc7 335 Gene3D G3DSA:3.40.640.10 7 250 3.4E-50 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS12970 7119031388567cfb089790b2876c3dc7 335 Gene3D G3DSA:3.90.1150.10 253 333 3.2E-14 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS11010 09ffbb1f1bd3eed012daf18a5a940deb 251 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 8 221 3.5E-86 T 20-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AMC99_RS11010 09ffbb1f1bd3eed012daf18a5a940deb 251 Gene3D G3DSA:3.40.50.300 8 223 2.2E-61 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11010 09ffbb1f1bd3eed012daf18a5a940deb 251 SMART SM00382 34 222 1.1E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS11010 09ffbb1f1bd3eed012daf18a5a940deb 251 Pfam PF00005 ABC transporter 25 172 5.8E-32 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS11010 09ffbb1f1bd3eed012daf18a5a940deb 251 PANTHER PTHR24220 10 225 2.6E-98 T 20-04-2016 AMC99_RS11010 09ffbb1f1bd3eed012daf18a5a940deb 251 SUPERFAMILY SSF52540 8 228 1.21E-61 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11010 09ffbb1f1bd3eed012daf18a5a940deb 251 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_RS11010 09ffbb1f1bd3eed012daf18a5a940deb 251 PANTHER PTHR24220:SF470 10 225 2.6E-98 T 20-04-2016 AMC99_RS10255 2dbecfb6c25c534c259a150c282d0ee7 87 SUPERFAMILY SSF47226 4 84 4.84E-14 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMC99_RS10255 2dbecfb6c25c534c259a150c282d0ee7 87 Gene3D G3DSA:1.20.120.160 4 78 4.4E-12 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMC99_RS10255 2dbecfb6c25c534c259a150c282d0ee7 87 Pfam PF01627 Hpt domain 7 86 4.6E-11 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMC99_RS07740 fae5ea4edf8cd56c7192bff7d2d87a62 200 SUPERFAMILY SSF50249 2 66 7.54E-5 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS07740 fae5ea4edf8cd56c7192bff7d2d87a62 200 Pfam PF11967 Recombination protein O N terminal 1 74 1.7E-12 T 20-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal AMC99_RS07740 fae5ea4edf8cd56c7192bff7d2d87a62 200 Pfam PF02565 Recombination protein O C terminal 88 148 6.7E-11 T 20-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AMC99_RS07740 fae5ea4edf8cd56c7192bff7d2d87a62 200 PANTHER PTHR33991 1 150 4.9E-12 T 20-04-2016 AMC99_RS01735 fc544d71d20432d9336ae14682f10f43 533 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 315 326 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_RS01735 fc544d71d20432d9336ae14682f10f43 533 PANTHER PTHR24960:SF45 38 445 3.0E-101 T 20-04-2016 AMC99_RS01735 fc544d71d20432d9336ae14682f10f43 533 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 80 519 3.0E-160 T 20-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 AMC99_RS01735 fc544d71d20432d9336ae14682f10f43 533 Pfam PF12801 4Fe-4S binding domain 140 177 7.2E-10 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_RS01735 fc544d71d20432d9336ae14682f10f43 533 Gene3D G3DSA:2.60.40.10 406 530 7.6E-25 T 20-04-2016 IPR013783 Immunoglobulin-like fold AMC99_RS01735 fc544d71d20432d9336ae14682f10f43 533 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 406 530 2.5E-25 T 20-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain AMC99_RS01735 fc544d71d20432d9336ae14682f10f43 533 SUPERFAMILY SSF54862 149 172 2.51E-28 T 20-04-2016 AMC99_RS01735 fc544d71d20432d9336ae14682f10f43 533 SUPERFAMILY SSF54862 218 410 2.51E-28 T 20-04-2016 AMC99_RS01735 fc544d71d20432d9336ae14682f10f43 533 PANTHER PTHR24960 38 445 3.0E-101 T 20-04-2016 AMC99_RS01735 fc544d71d20432d9336ae14682f10f43 533 Pfam PF13746 4Fe-4S dicluster domain 263 366 5.0E-40 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_RS01735 fc544d71d20432d9336ae14682f10f43 533 Gene3D G3DSA:3.30.70.20 255 350 6.1E-9 T 20-04-2016 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 PANTHER PTHR24093 11 648 7.4E-198 T 20-04-2016 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 100 376 2.0E-40 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 445 623 7.6E-35 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 Gene3D G3DSA:3.40.1110.10 358 473 3.5E-17 T 20-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 Gene3D G3DSA:3.40.50.1000 316 357 1.6E-40 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 Gene3D G3DSA:3.40.50.1000 474 613 1.6E-40 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 PANTHER PTHR24093:SF317 11 648 7.4E-198 T 20-04-2016 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 Pfam PF00122 E1-E2 ATPase 98 334 9.2E-66 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 SUPERFAMILY SSF81653 130 243 7.85E-25 T 20-04-2016 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 77 648 9.7E-169 T 20-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 SUPERFAMILY SSF56784 342 361 2.83E-47 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 SUPERFAMILY SSF56784 402 645 2.83E-47 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 SUPERFAMILY SSF81665 244 337 3.01E-21 T 20-04-2016 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 SUPERFAMILY SSF81665 80 131 3.01E-21 T 20-04-2016 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 471 482 4.2E-25 T 20-04-2016 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 570 582 4.2E-25 T 20-04-2016 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 177 191 4.2E-25 T 20-04-2016 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 494 504 4.2E-25 T 20-04-2016 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 343 357 4.2E-25 T 20-04-2016 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 546 565 4.2E-25 T 20-04-2016 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 Pfam PF00702 haloacid dehalogenase-like hydrolase 340 559 1.7E-41 T 20-04-2016 AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 345 351 - T 20-04-2016 IPR018303 P-type ATPase, phosphorylation site AMC99_RS00415 bdcd36364a4b1287ad4e93551c171e75 653 Gene3D G3DSA:2.70.150.10 80 243 2.5E-29 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 PANTHER PTHR22773:SF50 1 614 6.5E-251 T 20-04-2016 AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 PANTHER PTHR22773 1 614 6.5E-251 T 20-04-2016 AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 Pfam PF06455 NADH dehydrogenase subunit 5 C-terminus 487 658 1.5E-11 T 20-04-2016 IPR010934 NADH dehydrogenase subunit 5, C-terminal GO:0008137|GO:0042773|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 4.3E-66 T 20-04-2016 AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 232 253 4.3E-66 T 20-04-2016 AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 322 334 4.3E-66 T 20-04-2016 AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 4.3E-66 T 20-04-2016 AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 254 280 4.3E-66 T 20-04-2016 AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 4.3E-66 T 20-04-2016 AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 433 452 4.3E-66 T 20-04-2016 AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 272 294 3.6E-12 T 20-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 3.6E-12 T 20-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 432 454 3.6E-12 T 20-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 65 121 2.7E-25 T 20-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 Pfam PF00361 Proton-conducting membrane transporter 133 433 7.2E-87 T 20-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AMC99_RS06075 b456dc44cad5a430f1dffb0f8b2d85b4 663 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 661 1.8E-250 T 20-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 AMC99_RS02290 950c3b256f72bacda28b0978a79e8dd3 285 PANTHER PTHR30055 79 269 2.0E-12 T 20-04-2016 AMC99_RS02290 950c3b256f72bacda28b0978a79e8dd3 285 SUPERFAMILY SSF46689 85 158 4.34E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS02290 950c3b256f72bacda28b0978a79e8dd3 285 Gene3D G3DSA:1.10.357.10 85 244 3.3E-19 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMC99_RS05505 db9583ebd26a616fd8322a14fa3839ed 291 PANTHER PTHR32089 52 290 3.4E-12 T 20-04-2016 AMC99_RS05505 db9583ebd26a616fd8322a14fa3839ed 291 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 94 285 2.9E-15 T 20-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMC99_RS05505 db9583ebd26a616fd8322a14fa3839ed 291 SUPERFAMILY SSF58104 48 286 2.75E-25 T 20-04-2016 AMC99_RS05505 db9583ebd26a616fd8322a14fa3839ed 291 PANTHER PTHR32089:SF43 52 290 3.4E-12 T 20-04-2016 AMC99_RS05505 db9583ebd26a616fd8322a14fa3839ed 291 SMART SM00283 12 287 0.0015 T 20-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMC99_RS05505 db9583ebd26a616fd8322a14fa3839ed 291 Gene3D G3DSA:1.10.287.950 48 246 1.3E-25 T 20-04-2016 AMC99_RS07475 a6dd2c565e1527c1f653f36364e6f343 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 30.124 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07475 a6dd2c565e1527c1f653f36364e6f343 131 Pfam PF00410 Ribosomal protein S8 5 131 1.3E-45 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07475 a6dd2c565e1527c1f653f36364e6f343 131 Gene3D G3DSA:3.30.1490.10 75 131 1.4E-25 T 20-04-2016 AMC99_RS07475 a6dd2c565e1527c1f653f36364e6f343 131 SUPERFAMILY SSF56047 3 131 1.83E-43 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07475 a6dd2c565e1527c1f653f36364e6f343 131 PANTHER PTHR11758 1 131 6.9E-46 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07475 a6dd2c565e1527c1f653f36364e6f343 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07475 a6dd2c565e1527c1f653f36364e6f343 131 Gene3D G3DSA:3.30.1370.30 3 71 6.2E-25 T 20-04-2016 AMC99_RS03120 af4d84c2a70fd2c325260a333962a2d4 154 PANTHER PTHR30154 1 153 9.5E-62 T 20-04-2016 AMC99_RS03120 af4d84c2a70fd2c325260a333962a2d4 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 1.1E-17 T 20-04-2016 AMC99_RS03120 af4d84c2a70fd2c325260a333962a2d4 154 SUPERFAMILY SSF54909 64 153 3.08E-19 T 20-04-2016 IPR011008 Dimeric alpha-beta barrel AMC99_RS03120 af4d84c2a70fd2c325260a333962a2d4 154 SUPERFAMILY SSF46785 3 64 4.01E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS03120 af4d84c2a70fd2c325260a333962a2d4 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.0E-16 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMC99_RS03120 af4d84c2a70fd2c325260a333962a2d4 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.0E-16 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMC99_RS03120 af4d84c2a70fd2c325260a333962a2d4 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.0E-16 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMC99_RS03120 af4d84c2a70fd2c325260a333962a2d4 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 20-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMC99_RS03120 af4d84c2a70fd2c325260a333962a2d4 154 Gene3D G3DSA:3.30.70.920 57 153 1.4E-27 T 20-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMC99_RS03120 af4d84c2a70fd2c325260a333962a2d4 154 SMART SM00344 4 113 3.3E-45 T 20-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMC99_RS03120 af4d84c2a70fd2c325260a333962a2d4 154 Pfam PF01037 Lrp/AsnC ligand binding domain 71 143 5.8E-21 T 20-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMC99_RS03120 af4d84c2a70fd2c325260a333962a2d4 154 PANTHER PTHR30154:SF22 1 153 9.5E-62 T 20-04-2016 AMC99_RS03120 af4d84c2a70fd2c325260a333962a2d4 154 Gene3D G3DSA:1.10.10.10 2 55 2.9E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS03830 86b2bb03addb079cc6854a1d02ecbb81 75 Pfam PF01206 Sulfurtransferase TusA 5 73 1.0E-24 T 20-04-2016 IPR001455 TusA-like domain AMC99_RS03830 86b2bb03addb079cc6854a1d02ecbb81 75 PANTHER PTHR33279 1 75 4.9E-23 T 20-04-2016 AMC99_RS03830 86b2bb03addb079cc6854a1d02ecbb81 75 SUPERFAMILY SSF64307 3 73 9.81E-24 T 20-04-2016 IPR001455 TusA-like domain AMC99_RS03830 86b2bb03addb079cc6854a1d02ecbb81 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 6 30 - T 20-04-2016 IPR001455 TusA-like domain AMC99_RS03830 86b2bb03addb079cc6854a1d02ecbb81 75 Gene3D G3DSA:3.30.110.40 2 73 1.5E-30 T 20-04-2016 IPR001455 TusA-like domain AMC99_RS09410 82603cf877fcd7043b15a98d8f0f7a99 428 Gene3D G3DSA:3.40.50.300 153 387 2.3E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09410 82603cf877fcd7043b15a98d8f0f7a99 428 Gene3D G3DSA:3.40.50.2300 50 132 6.0E-5 T 20-04-2016 AMC99_RS09410 82603cf877fcd7043b15a98d8f0f7a99 428 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 153 354 2.8E-10 T 20-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMC99_RS09410 82603cf877fcd7043b15a98d8f0f7a99 428 PANTHER PTHR13696 91 398 3.4E-24 T 20-04-2016 AMC99_RS09410 82603cf877fcd7043b15a98d8f0f7a99 428 SUPERFAMILY SSF52172 27 142 2.49E-8 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS09410 82603cf877fcd7043b15a98d8f0f7a99 428 SUPERFAMILY SSF52540 153 388 4.56E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06200 0922827cc4911f7063ad64b83dc58aff 375 PANTHER PTHR11075:SF6 10 371 2.0E-163 T 20-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AMC99_RS06200 0922827cc4911f7063ad64b83dc58aff 375 Gene3D G3DSA:1.20.58.410 2 109 1.3E-24 T 20-04-2016 AMC99_RS06200 0922827cc4911f7063ad64b83dc58aff 375 Pfam PF00472 RF-1 domain 227 336 5.8E-40 T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMC99_RS06200 0922827cc4911f7063ad64b83dc58aff 375 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 243 259 - T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMC99_RS06200 0922827cc4911f7063ad64b83dc58aff 375 SUPERFAMILY SSF75620 30 364 5.36E-129 T 20-04-2016 AMC99_RS06200 0922827cc4911f7063ad64b83dc58aff 375 PANTHER PTHR11075 10 371 2.0E-163 T 20-04-2016 AMC99_RS06200 0922827cc4911f7063ad64b83dc58aff 375 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 4 362 1.1E-150 T 20-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AMC99_RS06200 0922827cc4911f7063ad64b83dc58aff 375 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 364 38.991 T 20-04-2016 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 AMC99_RS06200 0922827cc4911f7063ad64b83dc58aff 375 SMART SM00937 83 193 2.0E-51 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AMC99_RS06200 0922827cc4911f7063ad64b83dc58aff 375 Pfam PF03462 PCRF domain 30 218 3.8E-57 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AMC99_RS06200 0922827cc4911f7063ad64b83dc58aff 375 Gene3D G3DSA:3.30.160.20 225 303 8.6E-37 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain AMC99_RS06450 ee861f4645f5834e1030dc73c34030d4 159 Pfam PF00255 Glutathione peroxidase 5 111 1.0E-39 T 20-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 AMC99_RS06450 ee861f4645f5834e1030dc73c34030d4 159 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 20-04-2016 IPR029760 Glutathione peroxidase conserved site AMC99_RS06450 ee861f4645f5834e1030dc73c34030d4 159 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 20-04-2016 IPR029759 Glutathione peroxidase active site AMC99_RS06450 ee861f4645f5834e1030dc73c34030d4 159 PRINTS PR01011 Glutathione peroxidase family signature 57 73 7.7E-20 T 20-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 AMC99_RS06450 ee861f4645f5834e1030dc73c34030d4 159 PRINTS PR01011 Glutathione peroxidase family signature 22 39 7.7E-20 T 20-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 AMC99_RS06450 ee861f4645f5834e1030dc73c34030d4 159 PRINTS PR01011 Glutathione peroxidase family signature 123 132 7.7E-20 T 20-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 AMC99_RS06450 ee861f4645f5834e1030dc73c34030d4 159 SUPERFAMILY SSF52833 3 159 2.6E-63 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS06450 ee861f4645f5834e1030dc73c34030d4 159 PANTHER PTHR11592 1 159 1.5E-90 T 20-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 AMC99_RS06450 ee861f4645f5834e1030dc73c34030d4 159 PIRSF PIRSF000303 1 159 2.4E-66 T 20-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 AMC99_RS06450 ee861f4645f5834e1030dc73c34030d4 159 Gene3D G3DSA:3.40.30.10 3 159 2.7E-72 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 11 531 2.8E-184 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 Gene3D G3DSA:2.40.50.140 284 362 2.9E-30 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 PIRSF PIRSF002111 2 546 5.7E-186 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 Pfam PF00575 S1 RNA binding domain 461 532 8.3E-13 T 20-04-2016 IPR003029 S1 domain GO:0003676 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 Pfam PF00575 S1 RNA binding domain 283 356 1.8E-20 T 20-04-2016 IPR003029 S1 domain GO:0003676 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 Pfam PF00575 S1 RNA binding domain 28 95 7.2E-10 T 20-04-2016 IPR003029 S1 domain GO:0003676 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 Pfam PF00575 S1 RNA binding domain 198 269 7.7E-20 T 20-04-2016 IPR003029 S1 domain GO:0003676 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 Pfam PF00575 S1 RNA binding domain 111 180 1.2E-9 T 20-04-2016 IPR003029 S1 domain GO:0003676 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 Pfam PF00575 S1 RNA binding domain 369 443 3.5E-15 T 20-04-2016 IPR003029 S1 domain GO:0003676 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 SUPERFAMILY SSF50249 199 286 1.65E-25 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 SUPERFAMILY SSF50249 113 193 3.43E-12 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 SUPERFAMILY SSF50249 264 374 6.79E-29 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 PANTHER PTHR10724:SF6 9 527 2.2E-206 T 20-04-2016 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 Gene3D G3DSA:2.40.50.140 363 446 6.4E-23 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 SUPERFAMILY SSF50249 19 121 2.86E-18 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 SUPERFAMILY SSF50249 351 447 1.04E-20 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 Gene3D G3DSA:2.40.50.140 111 181 3.9E-12 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 Gene3D G3DSA:2.40.50.140 458 533 2.5E-13 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 93 112 3.5E-80 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 117 133 3.5E-80 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 48 62 3.5E-80 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 30 48 3.5E-80 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 135 152 3.5E-80 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 299 318 3.5E-80 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 164 184 3.5E-80 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 339 357 3.5E-80 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 221 242 3.5E-80 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 SMART SM00316 28 96 6.2E-10 T 20-04-2016 IPR022967 RNA-binding domain, S1 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 SMART SM00316 199 269 2.6E-26 T 20-04-2016 IPR022967 RNA-binding domain, S1 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 SMART SM00316 284 356 3.4E-25 T 20-04-2016 IPR022967 RNA-binding domain, S1 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 SMART SM00316 112 180 3.6E-5 T 20-04-2016 IPR022967 RNA-binding domain, S1 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 SMART SM00316 461 532 6.6E-14 T 20-04-2016 IPR022967 RNA-binding domain, S1 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 SMART SM00316 371 443 1.7E-17 T 20-04-2016 IPR022967 RNA-binding domain, S1 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 SUPERFAMILY SSF50249 456 545 2.69E-13 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 PANTHER PTHR10724 9 527 2.2E-206 T 20-04-2016 AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 Gene3D G3DSA:2.40.50.140 30 110 7.8E-13 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06955 4184e5b752e170136fee0ed4f3f315cf 568 Gene3D G3DSA:2.40.50.140 201 283 1.2E-28 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS11450 17538b32cbb883e62a169fd118377ace 221 Gene3D G3DSA:2.50.20.10 44 214 4.7E-29 T 20-04-2016 AMC99_RS11450 17538b32cbb883e62a169fd118377ace 221 SUPERFAMILY SSF89392 43 214 1.26E-29 T 20-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMC99_RS11450 17538b32cbb883e62a169fd118377ace 221 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 52 211 6.6E-24 T 20-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AMC99_RS11450 17538b32cbb883e62a169fd118377ace 221 PANTHER PTHR35869 12 214 9.9E-19 T 20-04-2016 AMC99_RS05970 686a6c5af0e694249502ffc132f92114 194 PANTHER PTHR11922 1 191 8.0E-80 T 20-04-2016 AMC99_RS05970 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 162 175 7.6E-13 T 20-04-2016 AMC99_RS05970 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 75 86 7.6E-13 T 20-04-2016 AMC99_RS05970 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.6E-13 T 20-04-2016 AMC99_RS05970 686a6c5af0e694249502ffc132f92114 194 Pfam PF00117 Glutamine amidotransferase class-I 3 183 2.4E-50 T 20-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMC99_RS05970 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 7.0E-36 T 20-04-2016 AMC99_RS05970 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 7.0E-36 T 20-04-2016 AMC99_RS05970 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 7.0E-36 T 20-04-2016 AMC99_RS05970 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 7.0E-36 T 20-04-2016 AMC99_RS05970 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00097 Anthranilate synthase component II signature 75 86 7.0E-36 T 20-04-2016 AMC99_RS05970 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00097 Anthranilate synthase component II signature 162 175 7.0E-36 T 20-04-2016 AMC99_RS05970 686a6c5af0e694249502ffc132f92114 194 Gene3D G3DSA:3.40.50.880 1 186 1.0E-64 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS05970 686a6c5af0e694249502ffc132f92114 194 PANTHER PTHR11922:SF7 1 191 8.0E-80 T 20-04-2016 AMC99_RS05970 686a6c5af0e694249502ffc132f92114 194 SUPERFAMILY SSF52317 1 186 1.99E-56 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS05970 686a6c5af0e694249502ffc132f92114 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 184 6.9E-63 T 20-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMC99_RS10155 a1c61f43353ed04e70c4a24b0fa4f0eb 299 SMART SM00849 57 273 7.7E-20 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS10155 a1c61f43353ed04e70c4a24b0fa4f0eb 299 Pfam PF00753 Metallo-beta-lactamase superfamily 60 273 1.0E-27 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS10155 a1c61f43353ed04e70c4a24b0fa4f0eb 299 PANTHER PTHR23200:SF43 1 274 1.9E-74 T 20-04-2016 AMC99_RS10155 a1c61f43353ed04e70c4a24b0fa4f0eb 299 PANTHER PTHR23200 1 274 1.9E-74 T 20-04-2016 AMC99_RS10155 a1c61f43353ed04e70c4a24b0fa4f0eb 299 SUPERFAMILY SSF56281 59 290 4.59E-41 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS10155 a1c61f43353ed04e70c4a24b0fa4f0eb 299 Gene3D G3DSA:3.60.15.10 6 289 1.3E-52 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS05205 13d50e9b66754b9a331503c357c69bec 145 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 142 5.2E-44 T 20-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 AMC99_RS05205 13d50e9b66754b9a331503c357c69bec 145 PIRSF PIRSF005384 1 145 1.8E-54 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMC99_RS05205 13d50e9b66754b9a331503c357c69bec 145 SUPERFAMILY SSF89623 1 142 4.71E-54 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMC99_RS05205 13d50e9b66754b9a331503c357c69bec 145 PANTHER PTHR30345 1 140 3.9E-60 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMC99_RS05205 13d50e9b66754b9a331503c357c69bec 145 Gene3D G3DSA:3.40.1400.10 1 142 3.3E-58 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMC99_RS05205 13d50e9b66754b9a331503c357c69bec 145 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 141 7.8E-47 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMC99_RS05205 13d50e9b66754b9a331503c357c69bec 145 Pfam PF02502 Ribose/Galactose Isomerase 3 140 5.5E-52 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMC99_RS13410 196fc49d787fef6c6020f0dcd15811dd 138 Pfam PF13430 Domain of unknown function (DUF4112) 25 126 3.9E-34 T 20-04-2016 IPR025187 Protein of unknown function DUF4112 AMC99_RS13410 196fc49d787fef6c6020f0dcd15811dd 138 PANTHER PTHR35519 38 134 2.1E-28 T 20-04-2016 AMC99_RS13410 196fc49d787fef6c6020f0dcd15811dd 138 PANTHER PTHR35519:SF2 38 134 2.1E-28 T 20-04-2016 AMC99_RS07625 e5b6d6628b6e6275e3be6c513030ba25 303 Pfam PF08666 SAF domain 45 107 1.1E-7 T 20-04-2016 IPR013974 SAF domain AMC99_RS07625 e5b6d6628b6e6275e3be6c513030ba25 303 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 294 3.7E-64 T 20-04-2016 IPR017592 Pilus assembly, Flp-type CpaB AMC99_RS07625 e5b6d6628b6e6275e3be6c513030ba25 303 SMART SM00858 44 108 1.2E-12 T 20-04-2016 IPR013974 SAF domain AMC99_RS07625 e5b6d6628b6e6275e3be6c513030ba25 303 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 115 222 5.6E-27 T 20-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain AMC99_RS09930 b1522feae9a2ea9c41753434cb4d9a95 603 PANTHER PTHR21000:SF9 5 593 0.0 T 20-04-2016 AMC99_RS09930 b1522feae9a2ea9c41753434cb4d9a95 603 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 506 517 - T 20-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS09930 b1522feae9a2ea9c41753434cb4d9a95 603 PANTHER PTHR21000 5 593 0.0 T 20-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS09930 b1522feae9a2ea9c41753434cb4d9a95 603 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 7 597 4.3E-267 T 20-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 AMC99_RS09930 b1522feae9a2ea9c41753434cb4d9a95 603 SUPERFAMILY SSF52016 420 596 2.43E-50 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMC99_RS09930 b1522feae9a2ea9c41753434cb4d9a95 603 SUPERFAMILY SSF143975 5 419 1.96E-134 T 20-04-2016 AMC99_RS09930 b1522feae9a2ea9c41753434cb4d9a95 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 157 167 - T 20-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS09930 b1522feae9a2ea9c41753434cb4d9a95 603 Pfam PF00920 Dehydratase family 69 593 4.1E-147 T 20-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS01015 c01a7503dba3d1fd12f4ef7ef0034bea 175 Gene3D G3DSA:3.30.240.20 91 156 2.2E-18 T 20-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain AMC99_RS01015 c01a7503dba3d1fd12f4ef7ef0034bea 175 PANTHER PTHR34582 1 155 5.7E-31 T 20-04-2016 AMC99_RS01015 c01a7503dba3d1fd12f4ef7ef0034bea 175 Pfam PF04239 Protein of unknown function (DUF421) 98 157 8.7E-13 T 20-04-2016 IPR007353 Protein of unknown function DUF421 AMC99_RS08570 976951767f515364269b35d4c0701f59 207 Hamap MF_00052_B Ribonuclease HII [rnhB]. 15 201 34.632 T 20-04-2016 IPR022898 Ribonuclease HII GO:0004523 AMC99_RS08570 976951767f515364269b35d4c0701f59 207 Pfam PF01351 Ribonuclease HII 17 200 2.9E-37 T 20-04-2016 IPR024567 Ribonuclease HII/HIII domain AMC99_RS08570 976951767f515364269b35d4c0701f59 207 PANTHER PTHR10954 14 204 1.9E-65 T 20-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 AMC99_RS08570 976951767f515364269b35d4c0701f59 207 Gene3D G3DSA:3.30.420.10 15 160 2.3E-44 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS08570 976951767f515364269b35d4c0701f59 207 SUPERFAMILY SSF53098 14 204 2.43E-63 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS07610 61d0a09d50b41eebc3a623a6e329bb6f 242 Gene3D G3DSA:3.30.1330.60 134 239 4.6E-14 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS07610 61d0a09d50b41eebc3a623a6e329bb6f 242 Pfam PF00691 OmpA family 154 228 7.0E-6 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS07610 61d0a09d50b41eebc3a623a6e329bb6f 242 SUPERFAMILY SSF103088 133 238 4.71E-14 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS13495 f46194a343f66906dc4918a945821e54 233 SUPERFAMILY SSF53335 55 231 1.77E-21 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS13495 f46194a343f66906dc4918a945821e54 233 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 17 233 25.062 T 20-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 AMC99_RS13495 f46194a343f66906dc4918a945821e54 233 PANTHER PTHR23417 46 232 3.5E-39 T 20-04-2016 AMC99_RS13495 f46194a343f66906dc4918a945821e54 233 Pfam PF02390 Putative methyltransferase 56 197 6.9E-35 T 20-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 AMC99_RS13495 f46194a343f66906dc4918a945821e54 233 Gene3D G3DSA:3.40.50.150 62 187 3.0E-5 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS13495 f46194a343f66906dc4918a945821e54 233 PANTHER PTHR23417:SF14 46 232 3.5E-39 T 20-04-2016 AMC99_RS08545 ac2822abb80991848830720f25868e4c 252 SUPERFAMILY SSF51735 5 251 7.43E-64 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08545 ac2822abb80991848830720f25868e4c 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 180 0.0012 T 20-04-2016 AMC99_RS08545 ac2822abb80991848830720f25868e4c 252 PANTHER PTHR24321 5 252 5.1E-41 T 20-04-2016 AMC99_RS08545 ac2822abb80991848830720f25868e4c 252 PANTHER PTHR24321:SF6 5 252 5.1E-41 T 20-04-2016 AMC99_RS08545 ac2822abb80991848830720f25868e4c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.1E-33 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08545 ac2822abb80991848830720f25868e4c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.1E-33 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08545 ac2822abb80991848830720f25868e4c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.1E-33 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08545 ac2822abb80991848830720f25868e4c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 2.1E-33 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08545 ac2822abb80991848830720f25868e4c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 2.1E-33 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08545 ac2822abb80991848830720f25868e4c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.1E-33 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08545 ac2822abb80991848830720f25868e4c 252 Gene3D G3DSA:3.40.50.720 4 251 6.5E-65 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08545 ac2822abb80991848830720f25868e4c 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 250 4.7E-50 T 20-04-2016 AMC99_RS08545 ac2822abb80991848830720f25868e4c 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS03580 711c1b2d5192db44041a46d4f666f000 226 PANTHER PTHR22939:SF104 34 203 1.6E-36 T 20-04-2016 AMC99_RS03580 711c1b2d5192db44041a46d4f666f000 226 Pfam PF02163 Peptidase family M50 134 168 1.7E-8 T 20-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 AMC99_RS03580 711c1b2d5192db44041a46d4f666f000 226 PANTHER PTHR22939 34 203 1.6E-36 T 20-04-2016 AMC99_RS04860 75a4b0189e3f9f6b9f4e115c97cf2db9 464 Gene3D G3DSA:1.10.260.40 9 70 2.9E-13 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS04860 75a4b0189e3f9f6b9f4e115c97cf2db9 464 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 298 455 1.3E-40 T 20-04-2016 IPR018653 Domain of unknown function DUF2083,transcriptional regulator AMC99_RS04860 75a4b0189e3f9f6b9f4e115c97cf2db9 464 Pfam PF13560 Helix-turn-helix domain 9 64 4.5E-11 T 20-04-2016 AMC99_RS04860 75a4b0189e3f9f6b9f4e115c97cf2db9 464 PIRSF PIRSF019251 1 459 9.4E-122 T 20-04-2016 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 AMC99_RS04860 75a4b0189e3f9f6b9f4e115c97cf2db9 464 SMART SM00530 11 66 4.4E-10 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS04860 75a4b0189e3f9f6b9f4e115c97cf2db9 464 Pfam PF06114 Domain of unknown function (DUF955) 174 297 2.0E-15 T 20-04-2016 IPR010359 HTH domain, IrrE-type AMC99_RS04860 75a4b0189e3f9f6b9f4e115c97cf2db9 464 SUPERFAMILY SSF47413 7 68 4.02E-11 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS13390 acbe5447d08dc4dd8c57f00301e63d97 109 Gene3D G3DSA:1.25.40.10 26 94 7.0E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS13390 acbe5447d08dc4dd8c57f00301e63d97 109 SUPERFAMILY SSF81901 14 79 1.02E-7 T 20-04-2016 AMC99_RS13390 acbe5447d08dc4dd8c57f00301e63d97 109 SMART SM00671 35 71 0.0029 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS08795 1a05dc70b1eff189c5376cedef9c088a 429 Gene3D G3DSA:3.40.440.10 192 264 8.4E-64 T 20-04-2016 AMC99_RS08795 1a05dc70b1eff189c5376cedef9c088a 429 Gene3D G3DSA:3.40.440.10 2 92 8.4E-64 T 20-04-2016 AMC99_RS08795 1a05dc70b1eff189c5376cedef9c088a 429 Gene3D G3DSA:1.10.300.10 101 191 1.1E-28 T 20-04-2016 AMC99_RS08795 1a05dc70b1eff189c5376cedef9c088a 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 20-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMC99_RS08795 1a05dc70b1eff189c5376cedef9c088a 429 SMART SM00788 3 422 4.1E-280 T 20-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMC99_RS08795 1a05dc70b1eff189c5376cedef9c088a 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 427 5.7E-155 T 20-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMC99_RS08795 1a05dc70b1eff189c5376cedef9c088a 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 203.687 T 20-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMC99_RS08795 1a05dc70b1eff189c5376cedef9c088a 429 SUPERFAMILY SSF52540 1 423 1.17E-165 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08795 1a05dc70b1eff189c5376cedef9c088a 429 PANTHER PTHR11846 2 426 1.2E-217 T 20-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMC99_RS08795 1a05dc70b1eff189c5376cedef9c088a 429 Gene3D G3DSA:3.90.170.10 265 423 1.7E-69 T 20-04-2016 AMC99_RS08795 1a05dc70b1eff189c5376cedef9c088a 429 Pfam PF00709 Adenylosuccinate synthetase 5 421 2.6E-167 T 20-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMC99_RS08795 1a05dc70b1eff189c5376cedef9c088a 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 132 143 - T 20-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 AMC99_RS10360 7b7ea3d5cfca0aeb5f63c9986a569441 317 SUPERFAMILY SSF50630 43 149 7.5E-12 T 20-04-2016 IPR021109 Aspartic peptidase domain AMC99_RS10360 7b7ea3d5cfca0aeb5f63c9986a569441 317 SUPERFAMILY SSF50630 181 285 3.19E-5 T 20-04-2016 IPR021109 Aspartic peptidase domain AMC99_RS10360 7b7ea3d5cfca0aeb5f63c9986a569441 317 Pfam PF13650 Aspartyl protease 187 278 8.1E-7 T 20-04-2016 AMC99_RS10360 7b7ea3d5cfca0aeb5f63c9986a569441 317 Pfam PF13650 Aspartyl protease 51 138 3.0E-14 T 20-04-2016 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 420 439 4.4E-28 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 4.4E-28 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 4.4E-28 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 269 284 4.4E-28 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 341 357 4.4E-28 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 SUPERFAMILY SSF109604 370 518 8.9E-20 T 20-04-2016 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 PANTHER PTHR30075 624 729 3.0E-227 T 20-04-2016 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 PANTHER PTHR30075 218 604 3.0E-227 T 20-04-2016 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 Pfam PF05746 DALR anticodon binding domain 639 720 2.9E-5 T 20-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 728 22.828 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 PANTHER PTHR30075:SF2 218 604 3.0E-227 T 20-04-2016 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 PANTHER PTHR30075 1 189 3.0E-227 T 20-04-2016 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 PANTHER PTHR30075:SF2 624 729 3.0E-227 T 20-04-2016 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 558 2.9E-186 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 PANTHER PTHR30075:SF2 1 189 3.0E-227 T 20-04-2016 AMC99_RS05405 67120a97e5876415fa6af22b7d78d2cb 730 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 220 728 4.1E-121 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_RS00110 64da559953079b483d873818c131ba10 316 PANTHER PTHR12126 12 308 2.9E-70 T 20-04-2016 AMC99_RS00110 64da559953079b483d873818c131ba10 316 Gene3D G3DSA:3.40.50.720 8 232 3.1E-49 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS00110 64da559953079b483d873818c131ba10 316 SUPERFAMILY SSF51735 9 255 5.97E-51 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS00110 64da559953079b483d873818c131ba10 316 Pfam PF13460 NAD(P)H-binding 16 206 2.1E-16 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS10165 6167203db6196288bf731f919281ee9a 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 43 74 - T 20-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMC99_RS10165 6167203db6196288bf731f919281ee9a 213 PANTHER PTHR30055:SF56 29 207 1.0E-23 T 20-04-2016 AMC99_RS10165 6167203db6196288bf731f919281ee9a 213 PANTHER PTHR30055 29 207 1.0E-23 T 20-04-2016 AMC99_RS10165 6167203db6196288bf731f919281ee9a 213 SUPERFAMILY SSF46689 26 96 1.2E-15 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS10165 6167203db6196288bf731f919281ee9a 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 52 75 2.0E-9 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS10165 6167203db6196288bf731f919281ee9a 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 44 2.0E-9 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS10165 6167203db6196288bf731f919281ee9a 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 77 8.2E-14 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS10165 6167203db6196288bf731f919281ee9a 213 SUPERFAMILY SSF48498 101 207 5.5E-17 T 20-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMC99_RS10165 6167203db6196288bf731f919281ee9a 213 Gene3D G3DSA:1.10.10.60 26 74 3.5E-17 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS10165 6167203db6196288bf731f919281ee9a 213 Gene3D G3DSA:1.10.357.10 75 210 1.7E-33 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMC99_RS12795 3b41de66594a60c0362d2fab988dd577 214 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 170 214 1.7E-11 T 20-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMC99_RS12795 3b41de66594a60c0362d2fab988dd577 214 SUPERFAMILY SSF50475 18 214 2.27E-55 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMC99_RS12795 3b41de66594a60c0362d2fab988dd577 214 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 12 198 2.2E-58 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMC99_RS12795 3b41de66594a60c0362d2fab988dd577 214 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 6 214 34.069 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMC99_RS12795 3b41de66594a60c0362d2fab988dd577 214 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 115 7.9E-24 T 20-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMC99_RS12795 3b41de66594a60c0362d2fab988dd577 214 PANTHER PTHR10851:SF0 16 214 1.3E-76 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMC99_RS12795 3b41de66594a60c0362d2fab988dd577 214 PIRSF PIRSF000190 3 214 5.4E-65 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMC99_RS12795 3b41de66594a60c0362d2fab988dd577 214 Gene3D G3DSA:2.30.110.10 19 214 6.5E-69 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMC99_RS12795 3b41de66594a60c0362d2fab988dd577 214 PANTHER PTHR10851 16 214 1.3E-76 T 20-04-2016 AMC99_RS12795 3b41de66594a60c0362d2fab988dd577 214 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 180 193 - T 20-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMC99_RS01330 3a358a4688ccc07b86910081103a2cb1 136 Gene3D G3DSA:3.40.250.10 32 135 7.0E-26 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS01330 3a358a4688ccc07b86910081103a2cb1 136 SUPERFAMILY SSF52821 34 135 5.89E-27 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS01330 3a358a4688ccc07b86910081103a2cb1 136 Pfam PF00581 Rhodanese-like domain 39 129 9.1E-15 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS01330 3a358a4688ccc07b86910081103a2cb1 136 SMART SM00450 37 132 2.5E-20 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS06600 de8e57b6f2d9e97b61d3538dbe7b53ee 133 Gene3D G3DSA:1.20.1300.10 9 120 1.2E-28 T 20-04-2016 AMC99_RS06600 de8e57b6f2d9e97b61d3538dbe7b53ee 133 SUPERFAMILY SSF81343 11 122 5.23E-27 T 20-04-2016 AMC99_RS06600 de8e57b6f2d9e97b61d3538dbe7b53ee 133 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 7 108 4.2E-16 T 20-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 AMC99_RS06600 de8e57b6f2d9e97b61d3538dbe7b53ee 133 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 16 119 1.4E-26 T 20-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 AMC99_RS12225 c8ef7846071ac9f65c0d1eaecc9dc714 327 PANTHER PTHR34266:SF2 70 327 5.3E-143 T 20-04-2016 AMC99_RS12225 c8ef7846071ac9f65c0d1eaecc9dc714 327 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 7 69 5.0E-19 T 20-04-2016 IPR010035 ThiS, thiamine-biosynthesis AMC99_RS12225 c8ef7846071ac9f65c0d1eaecc9dc714 327 Pfam PF05690 Thiazole biosynthesis protein ThiG 78 322 1.2E-107 T 20-04-2016 AMC99_RS12225 c8ef7846071ac9f65c0d1eaecc9dc714 327 SUPERFAMILY SSF54285 6 68 2.62E-16 T 20-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMC99_RS12225 c8ef7846071ac9f65c0d1eaecc9dc714 327 SUPERFAMILY SSF110399 74 314 1.1E-84 T 20-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 AMC99_RS12225 c8ef7846071ac9f65c0d1eaecc9dc714 327 PANTHER PTHR34266 70 327 5.3E-143 T 20-04-2016 AMC99_RS12225 c8ef7846071ac9f65c0d1eaecc9dc714 327 Gene3D G3DSA:3.20.20.70 84 303 2.4E-57 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS12225 c8ef7846071ac9f65c0d1eaecc9dc714 327 Gene3D G3DSA:3.10.20.30 6 69 3.8E-24 T 20-04-2016 IPR012675 Beta-grasp domain AMC99_RS12225 c8ef7846071ac9f65c0d1eaecc9dc714 327 Pfam PF02597 ThiS family 7 69 5.7E-12 T 20-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 AMC99_RS12225 c8ef7846071ac9f65c0d1eaecc9dc714 327 Hamap MF_00443 Thiazole synthase [thiG]. 75 327 41.324 T 20-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 95 127 44.0 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 203 236 0.0091 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 242 271 0.27 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 346 379 5.7 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 166 200 3.0 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 275 293 250.0 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 311 336 38.0 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 130 163 4.8 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 92 127 0.0036 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 273 308 0.047 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 128 164 0.13 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 346 381 6.0E-4 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 56 91 2.4 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 237 272 8.5 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 309 344 5.5 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 165 200 0.56 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 201 236 2.5E-4 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 SUPERFAMILY SSF81901 85 283 5.82E-34 T 20-04-2016 AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 SUPERFAMILY SSF81901 256 389 1.19E-21 T 20-04-2016 AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 PANTHER PTHR11102:SF88 55 371 1.7E-37 T 20-04-2016 AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 PANTHER PTHR11102 55 371 1.7E-37 T 20-04-2016 AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 Gene3D G3DSA:1.25.40.10 44 228 6.1E-30 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS00515 36b114b82d37d002446904ef8e7fbbd2 394 Gene3D G3DSA:1.25.40.10 229 388 6.9E-29 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS10365 c250468e408af9e1230e1978a4b9dd24 609 Gene3D G3DSA:3.40.50.300 360 591 4.4E-81 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10365 c250468e408af9e1230e1978a4b9dd24 609 SUPERFAMILY SSF52540 352 597 4.46E-88 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10365 c250468e408af9e1230e1978a4b9dd24 609 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_RS10365 c250468e408af9e1230e1978a4b9dd24 609 Gene3D G3DSA:1.20.1560.10 20 343 7.1E-63 T 20-04-2016 AMC99_RS10365 c250468e408af9e1230e1978a4b9dd24 609 Pfam PF00664 ABC transporter transmembrane region 41 316 5.5E-38 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMC99_RS10365 c250468e408af9e1230e1978a4b9dd24 609 SUPERFAMILY SSF90123 20 350 7.72E-61 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMC99_RS10365 c250468e408af9e1230e1978a4b9dd24 609 PANTHER PTHR24221 7 606 5.7E-279 T 20-04-2016 AMC99_RS10365 c250468e408af9e1230e1978a4b9dd24 609 SMART SM00382 387 573 5.9E-19 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS10365 c250468e408af9e1230e1978a4b9dd24 609 PANTHER PTHR24221:SF18 7 606 5.7E-279 T 20-04-2016 AMC99_RS10365 c250468e408af9e1230e1978a4b9dd24 609 Pfam PF00005 ABC transporter 378 527 4.3E-34 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS02395 05a31afcec78d6637c3f6deeb647cae0 505 Pfam PF00135 Carboxylesterase family 61 479 2.8E-68 T 20-04-2016 IPR002018 Carboxylesterase, type B AMC99_RS02395 05a31afcec78d6637c3f6deeb647cae0 505 Gene3D G3DSA:3.40.50.1820 58 497 1.8E-98 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS02395 05a31afcec78d6637c3f6deeb647cae0 505 SUPERFAMILY SSF53474 41 496 2.46E-84 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS02395 05a31afcec78d6637c3f6deeb647cae0 505 PANTHER PTHR11559 62 489 4.8E-94 T 20-04-2016 AMC99_RS02395 05a31afcec78d6637c3f6deeb647cae0 505 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 199 214 - T 20-04-2016 IPR019826 Carboxylesterase type B, active site AMC99_RS05895 300a35685094d6e5f5681dc840771a81 387 SUPERFAMILY SSF56645 5 244 6.54E-61 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS05895 300a35685094d6e5f5681dc840771a81 387 Gene3D G3DSA:2.40.110.10 120 221 1.4E-31 T 20-04-2016 AMC99_RS05895 300a35685094d6e5f5681dc840771a81 387 PANTHER PTHR10909:SF285 5 387 2.4E-242 T 20-04-2016 AMC99_RS05895 300a35685094d6e5f5681dc840771a81 387 SUPERFAMILY SSF47203 230 385 3.7E-45 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS05895 300a35685094d6e5f5681dc840771a81 387 Gene3D G3DSA:1.20.140.10 222 386 1.3E-57 T 20-04-2016 AMC99_RS05895 300a35685094d6e5f5681dc840771a81 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_RS05895 300a35685094d6e5f5681dc840771a81 387 PANTHER PTHR10909 5 387 2.4E-242 T 20-04-2016 AMC99_RS05895 300a35685094d6e5f5681dc840771a81 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 219 5.3E-22 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS05895 300a35685094d6e5f5681dc840771a81 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 365 2.1E-36 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS05895 300a35685094d6e5f5681dc840771a81 387 Gene3D G3DSA:1.10.540.10 5 116 5.3E-28 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS05895 300a35685094d6e5f5681dc840771a81 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_RS05895 300a35685094d6e5f5681dc840771a81 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 115 3.7E-23 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS06040 7a3e30a3ae6b4ce6c620e6e3b5d73b42 874 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 156 702 6.0E-6 T 20-04-2016 AMC99_RS07285 2a4454589f8954f176d7a50a69da4af3 112 Gene3D G3DSA:3.30.1390.10 82 109 9.9E-8 T 20-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMC99_RS07285 2a4454589f8954f176d7a50a69da4af3 112 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 82 109 4.8E-8 T 20-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 AMC99_RS07285 2a4454589f8954f176d7a50a69da4af3 112 SUPERFAMILY SSF54736 82 109 1.55E-5 T 20-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMC99_RS07285 2a4454589f8954f176d7a50a69da4af3 112 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 82 109 0.003 T 20-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 AMC99_RS10415 c0412175c1ec37845f6b33e8e03daa28 618 Pfam PF07670 Nucleoside recognition 288 380 3.8E-11 T 20-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 AMC99_RS10415 c0412175c1ec37845f6b33e8e03daa28 618 Pfam PF07670 Nucleoside recognition 457 588 1.1E-22 T 20-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 AMC99_RS10415 c0412175c1ec37845f6b33e8e03daa28 618 PANTHER PTHR11649 204 610 1.4E-218 T 20-04-2016 AMC99_RS10415 c0412175c1ec37845f6b33e8e03daa28 618 PANTHER PTHR11649 6 154 1.4E-218 T 20-04-2016 AMC99_RS10415 c0412175c1ec37845f6b33e8e03daa28 618 Pfam PF02421 Ferrous iron transport protein B 6 166 6.6E-52 T 20-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 AMC99_RS10415 c0412175c1ec37845f6b33e8e03daa28 618 Pfam PF07664 Ferrous iron transport protein B C terminus 400 452 3.5E-18 T 20-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AMC99_RS10415 c0412175c1ec37845f6b33e8e03daa28 618 Gene3D G3DSA:3.40.50.300 6 177 1.6E-33 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10415 c0412175c1ec37845f6b33e8e03daa28 618 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 163 1.6E-12 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_RS10415 c0412175c1ec37845f6b33e8e03daa28 618 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 46 2.11E-9 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS10415 c0412175c1ec37845f6b33e8e03daa28 618 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 2.11E-9 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS10415 c0412175c1ec37845f6b33e8e03daa28 618 SUPERFAMILY SSF52540 6 170 4.33E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10415 c0412175c1ec37845f6b33e8e03daa28 618 PANTHER PTHR11649:SF37 204 610 1.4E-218 T 20-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AMC99_RS10415 c0412175c1ec37845f6b33e8e03daa28 618 PANTHER PTHR11649:SF37 6 154 1.4E-218 T 20-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AMC99_RS01285 a9fe6f88db3804db279c40a3ad49bc92 476 Pfam PF00144 Beta-lactamase 31 340 2.8E-72 T 20-04-2016 IPR001466 Beta-lactamase-related AMC99_RS01285 a9fe6f88db3804db279c40a3ad49bc92 476 Gene3D G3DSA:3.40.710.10 25 335 2.8E-84 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS01285 a9fe6f88db3804db279c40a3ad49bc92 476 SUPERFAMILY SSF56601 24 344 7.31E-83 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS01285 a9fe6f88db3804db279c40a3ad49bc92 476 PANTHER PTHR22935 25 331 7.9E-75 T 20-04-2016 AMC99_RS00575 354a1daa4f6ba3dd6ab68fd01a299fba 909 Gene3D G3DSA:1.25.40.10 188 353 3.3E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS00575 354a1daa4f6ba3dd6ab68fd01a299fba 909 Gene3D G3DSA:1.25.40.10 27 183 9.1E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS00575 354a1daa4f6ba3dd6ab68fd01a299fba 909 Gene3D G3DSA:1.25.40.10 455 525 3.3E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS00575 354a1daa4f6ba3dd6ab68fd01a299fba 909 PANTHER PTHR19959:SF135 26 308 5.5E-16 T 20-04-2016 AMC99_RS00575 354a1daa4f6ba3dd6ab68fd01a299fba 909 SMART SM00028 235 268 120.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS00575 354a1daa4f6ba3dd6ab68fd01a299fba 909 SMART SM00028 151 184 110.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS00575 354a1daa4f6ba3dd6ab68fd01a299fba 909 SMART SM00028 277 310 230.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS00575 354a1daa4f6ba3dd6ab68fd01a299fba 909 SMART SM00028 193 226 16.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS00575 354a1daa4f6ba3dd6ab68fd01a299fba 909 SUPERFAMILY SSF48452 113 226 2.03E-14 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS00575 354a1daa4f6ba3dd6ab68fd01a299fba 909 Pfam PF13424 Tetratricopeptide repeat 115 180 7.9E-11 T 20-04-2016 AMC99_RS00575 354a1daa4f6ba3dd6ab68fd01a299fba 909 SUPERFAMILY SSF48452 189 337 3.41E-13 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS00575 354a1daa4f6ba3dd6ab68fd01a299fba 909 Pfam PF12770 CHAT domain 599 907 2.6E-39 T 20-04-2016 IPR024983 CHAT domain AMC99_RS00575 354a1daa4f6ba3dd6ab68fd01a299fba 909 PANTHER PTHR19959 26 308 5.5E-16 T 20-04-2016 AMC99_RS13100 77dda29c3340ec15ea2d1ca350c38fae 139 Gene3D G3DSA:3.10.129.10 1 129 2.6E-35 T 20-04-2016 IPR029069 HotDog domain AMC99_RS13100 77dda29c3340ec15ea2d1ca350c38fae 139 SUPERFAMILY SSF54637 1 129 2.33E-33 T 20-04-2016 IPR029069 HotDog domain AMC99_RS13100 77dda29c3340ec15ea2d1ca350c38fae 139 PANTHER PTHR31793 1 129 1.1E-24 T 20-04-2016 AMC99_RS13100 77dda29c3340ec15ea2d1ca350c38fae 139 Pfam PF03061 Thioesterase superfamily 20 97 6.3E-10 T 20-04-2016 IPR006683 Thioesterase domain AMC99_RS11735 f6db1204d0073064a93bdc0b41be93a0 326 SUPERFAMILY SSF55909 3 322 2.14E-100 T 20-04-2016 AMC99_RS11735 f6db1204d0073064a93bdc0b41be93a0 326 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 6 321 1.4E-93 T 20-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AMC99_RS11735 f6db1204d0073064a93bdc0b41be93a0 326 PANTHER PTHR31377 5 326 1.2E-89 T 20-04-2016 AMC99_RS11735 f6db1204d0073064a93bdc0b41be93a0 326 PANTHER PTHR31377:SF0 5 326 1.2E-89 T 20-04-2016 AMC99_RS11735 f6db1204d0073064a93bdc0b41be93a0 326 Gene3D G3DSA:3.75.10.10 3 322 2.1E-99 T 20-04-2016 AMC99_RS08290 0b64ffc8ee437178b5e1f319f90e49cb 135 Gene3D G3DSA:3.90.1010.10 3 131 2.1E-40 T 20-04-2016 AMC99_RS08290 0b64ffc8ee437178b5e1f319f90e49cb 135 Pfam PF02657 Fe-S metabolism associated domain 14 127 7.5E-34 T 20-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 AMC99_RS08290 0b64ffc8ee437178b5e1f319f90e49cb 135 PANTHER PTHR12735:SF11 7 134 2.8E-26 T 20-04-2016 AMC99_RS08290 0b64ffc8ee437178b5e1f319f90e49cb 135 SUPERFAMILY SSF82649 2 131 1.46E-35 T 20-04-2016 AMC99_RS08290 0b64ffc8ee437178b5e1f319f90e49cb 135 PANTHER PTHR12735 7 134 2.8E-26 T 20-04-2016 AMC99_RS06130 98b5f450acebedfecddcc915ee1772b2 284 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 41 159 2.0E-40 T 20-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 AMC99_RS06130 98b5f450acebedfecddcc915ee1772b2 284 SUPERFAMILY SSF143243 16 191 5.75E-56 T 20-04-2016 AMC99_RS06130 98b5f450acebedfecddcc915ee1772b2 284 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 16 166 29.474 T 20-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 AMC99_RS06130 98b5f450acebedfecddcc915ee1772b2 284 PANTHER PTHR10884:SF10 37 216 2.1E-78 T 20-04-2016 AMC99_RS06130 98b5f450acebedfecddcc915ee1772b2 284 PANTHER PTHR10884 37 216 2.1E-78 T 20-04-2016 AMC99_RS06130 98b5f450acebedfecddcc915ee1772b2 284 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 145 2.0E-25 T 20-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 AMC99_RS06130 98b5f450acebedfecddcc915ee1772b2 284 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 39 158 5.0E-40 T 20-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 AMC99_RS01810 c893a788f41fa40935c9a204cec20fb9 377 Gene3D G3DSA:3.30.70.270 85 183 3.4E-34 T 20-04-2016 AMC99_RS01810 c893a788f41fa40935c9a204cec20fb9 377 Pfam PF11798 IMS family HHH motif 185 216 1.2E-5 T 20-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS01810 c893a788f41fa40935c9a204cec20fb9 377 SUPERFAMILY SSF56672 21 253 8.36E-93 T 20-04-2016 AMC99_RS01810 c893a788f41fa40935c9a204cec20fb9 377 Pfam PF11799 impB/mucB/samB family C-terminal domain 254 364 2.6E-15 T 20-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS01810 c893a788f41fa40935c9a204cec20fb9 377 Gene3D G3DSA:3.30.1490.100 260 365 2.9E-33 T 20-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS01810 c893a788f41fa40935c9a204cec20fb9 377 Pfam PF00817 impB/mucB/samB family 27 173 3.1E-49 T 20-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS01810 c893a788f41fa40935c9a204cec20fb9 377 Hamap MF_01113 DNA polymerase IV [dinB]. 21 376 38.997 T 20-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS01810 c893a788f41fa40935c9a204cec20fb9 377 Gene3D G3DSA:1.10.150.20 185 253 3.6E-22 T 20-04-2016 AMC99_RS01810 c893a788f41fa40935c9a204cec20fb9 377 PANTHER PTHR11076 22 376 6.2E-145 T 20-04-2016 AMC99_RS01810 c893a788f41fa40935c9a204cec20fb9 377 SUPERFAMILY SSF100879 257 357 5.1E-27 T 20-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS01720 882de9fe3bca1861ee30ff1c8a6dc294 50 PANTHER PTHR41532 2 49 3.0E-13 T 20-04-2016 AMC99_RS01720 882de9fe3bca1861ee30ff1c8a6dc294 50 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 4 49 1.9E-21 T 20-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type AMC99_RS01720 882de9fe3bca1861ee30ff1c8a6dc294 50 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 4 45 1.5E-21 T 20-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 Pfam PF00270 DEAD/DEAH box helicase 282 417 1.1E-17 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 SMART SM00487 254 445 2.5E-30 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 PANTHER PTHR24031:SF249 610 637 2.9E-102 T 20-04-2016 AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 PANTHER PTHR24031:SF249 288 586 2.9E-102 T 20-04-2016 AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 PANTHER PTHR24031:SF249 671 676 2.9E-102 T 20-04-2016 AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 PANTHER PTHR24031:SF249 258 271 2.9E-102 T 20-04-2016 AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 Gene3D G3DSA:3.40.50.300 440 622 4.8E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 SMART SM00490 490 573 1.6E-20 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 Pfam PF17191 RecG wedge domain 17 173 1.0E-9 T 20-04-2016 IPR033454 RecG, wedge domain AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 Gene3D G3DSA:2.40.50.140 50 140 1.6E-5 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 PANTHER PTHR24031 610 637 2.9E-102 T 20-04-2016 AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 PANTHER PTHR24031 288 586 2.9E-102 T 20-04-2016 AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 PANTHER PTHR24031 671 676 2.9E-102 T 20-04-2016 AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 PANTHER PTHR24031 258 271 2.9E-102 T 20-04-2016 AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 SUPERFAMILY SSF50249 12 177 1.34E-24 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 SUPERFAMILY SSF52540 306 581 1.31E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 Gene3D G3DSA:3.40.50.300 251 439 1.5E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04700 7f713cf5793cf847c91a7ec90a3a98f5 686 Pfam PF00271 Helicase conserved C-terminal domain 463 572 3.4E-18 T 20-04-2016 IPR001650 Helicase, C-terminal AMC99_RS04010 57915975e6c2f5f624517e8ad77d5ee4 475 Pfam PF14403 Circularly permuted ATP-grasp type 2 74 451 4.3E-156 T 20-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 AMC99_RS04010 57915975e6c2f5f624517e8ad77d5ee4 475 PANTHER PTHR34595 8 475 3.2E-265 T 20-04-2016 AMC99_RS04010 57915975e6c2f5f624517e8ad77d5ee4 475 PANTHER PTHR34595:SF3 8 475 3.2E-265 T 20-04-2016 AMC99_RS04010 57915975e6c2f5f624517e8ad77d5ee4 475 SUPERFAMILY SSF56059 18 212 2.07E-64 T 20-04-2016 AMC99_RS04010 57915975e6c2f5f624517e8ad77d5ee4 475 SUPERFAMILY SSF56059 320 466 2.07E-64 T 20-04-2016 AMC99_RS04010 57915975e6c2f5f624517e8ad77d5ee4 475 PIRSF PIRSF005522 1 475 1.3E-216 T 20-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 AMC99_RS12195 a0719e90e975b07af1aece6387a8f219 307 SMART SM00342 195 279 0.001 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_RS12195 a0719e90e975b07af1aece6387a8f219 307 Gene3D G3DSA:1.10.10.60 177 232 0.001 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS12195 a0719e90e975b07af1aece6387a8f219 307 Pfam PF12833 Helix-turn-helix domain 202 277 2.7E-9 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_RS11965 1d4f68a030f619e7fe08a197807816a0 498 Pfam PF04820 Tryptophan halogenase 7 456 1.1E-186 T 20-04-2016 IPR006905 Tryptophan halogenase AMC99_RS11965 1d4f68a030f619e7fe08a197807816a0 498 SUPERFAMILY SSF51905 4 89 1.98E-34 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11965 1d4f68a030f619e7fe08a197807816a0 498 SUPERFAMILY SSF51905 316 418 1.98E-34 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11965 1d4f68a030f619e7fe08a197807816a0 498 SUPERFAMILY SSF51905 133 231 1.98E-34 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11965 1d4f68a030f619e7fe08a197807816a0 498 PIRSF PIRSF011396 1 494 1.3E-196 T 20-04-2016 IPR006905 Tryptophan halogenase AMC99_RS11965 1d4f68a030f619e7fe08a197807816a0 498 Gene3D G3DSA:3.50.50.60 2 74 4.4E-48 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11965 1d4f68a030f619e7fe08a197807816a0 498 Gene3D G3DSA:3.50.50.60 149 229 4.4E-48 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11965 1d4f68a030f619e7fe08a197807816a0 498 Gene3D G3DSA:3.50.50.60 311 355 4.4E-48 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS00770 214739fe79d9a974c00b3b8eef280115 268 PANTHER PTHR10909:SF291 119 228 2.9E-19 T 20-04-2016 AMC99_RS00770 214739fe79d9a974c00b3b8eef280115 268 PANTHER PTHR10909 119 228 2.9E-19 T 20-04-2016 AMC99_RS00770 214739fe79d9a974c00b3b8eef280115 268 Gene3D G3DSA:1.20.140.10 114 254 9.4E-22 T 20-04-2016 AMC99_RS00770 214739fe79d9a974c00b3b8eef280115 268 SUPERFAMILY SSF47203 113 254 5.64E-28 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS00770 214739fe79d9a974c00b3b8eef280115 268 SUPERFAMILY SSF56645 11 106 2.68E-5 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS00770 214739fe79d9a974c00b3b8eef280115 268 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 112 231 5.7E-17 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS07430 5733fdaac27073bc69bb989beeee2a2a 231 Gene3D G3DSA:3.30.530.20 40 181 1.8E-5 T 20-04-2016 IPR023393 START-like domain AMC99_RS07430 5733fdaac27073bc69bb989beeee2a2a 231 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 35 180 2.7E-7 T 20-04-2016 IPR019587 Polyketide cyclase/dehydrase AMC99_RS07430 5733fdaac27073bc69bb989beeee2a2a 231 SUPERFAMILY SSF55961 34 182 1.07E-11 T 20-04-2016 AMC99_RS10920 55c53e907ccdf5a90f2143b71389fd76 327 Gene3D G3DSA:3.40.50.300 78 317 5.3E-84 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10920 55c53e907ccdf5a90f2143b71389fd76 327 Hamap MF_02040 Iron-sulfur cluster carrier protein. 71 319 32.248 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMC99_RS10920 55c53e907ccdf5a90f2143b71389fd76 327 PANTHER PTHR23264 79 326 3.0E-105 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMC99_RS10920 55c53e907ccdf5a90f2143b71389fd76 327 SUPERFAMILY SSF52540 80 323 8.74E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10920 55c53e907ccdf5a90f2143b71389fd76 327 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 80 318 3.5E-83 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMC99_RS05600 bb5d1e9e5e3b9aad00f3f4c74b0faf4a 387 SUPERFAMILY SSF140959 4 384 7.46E-105 T 20-04-2016 AMC99_RS05600 bb5d1e9e5e3b9aad00f3f4c74b0faf4a 387 PANTHER PTHR28657 3 386 1.1E-97 T 20-04-2016 AMC99_RS05600 bb5d1e9e5e3b9aad00f3f4c74b0faf4a 387 Pfam PF01231 Indoleamine 2,3-dioxygenase 3 382 8.5E-77 T 20-04-2016 IPR000898 Indoleamine 2,3-dioxygenase GO:0020037 AMC99_RS10820 65cfb51b039a1ae57ef639b10fc717a8 435 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 195 432 1.7E-75 T 20-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 AMC99_RS10820 65cfb51b039a1ae57ef639b10fc717a8 435 PANTHER PTHR10590 262 432 2.5E-166 T 20-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 AMC99_RS10820 65cfb51b039a1ae57ef639b10fc717a8 435 PANTHER PTHR10590 1 234 2.5E-166 T 20-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 AMC99_RS10820 65cfb51b039a1ae57ef639b10fc717a8 435 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 80 6.0E-21 T 20-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 AMC99_RS09985 21121d53c06b82ec32c3d0ccf8adc7b3 489 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 248 1.2E-62 T 20-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMC99_RS09985 21121d53c06b82ec32c3d0ccf8adc7b3 489 SUPERFAMILY SSF53067 4 251 6.78E-80 T 20-04-2016 AMC99_RS09985 21121d53c06b82ec32c3d0ccf8adc7b3 489 SUPERFAMILY SSF53067 251 487 2.82E-70 T 20-04-2016 AMC99_RS09985 21121d53c06b82ec32c3d0ccf8adc7b3 489 PANTHER PTHR10196 1 485 2.8E-191 T 20-04-2016 AMC99_RS09985 21121d53c06b82ec32c3d0ccf8adc7b3 489 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 445 2.8E-47 T 20-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMC99_RS09985 21121d53c06b82ec32c3d0ccf8adc7b3 489 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 133 145 - T 20-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMC99_RS09985 21121d53c06b82ec32c3d0ccf8adc7b3 489 Gene3D G3DSA:3.30.420.40 2 249 1.0E-86 T 20-04-2016 AMC99_RS09985 21121d53c06b82ec32c3d0ccf8adc7b3 489 Gene3D G3DSA:3.30.420.40 251 487 2.3E-79 T 20-04-2016 AMC99_RS09985 21121d53c06b82ec32c3d0ccf8adc7b3 489 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 358 378 - T 20-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMC99_RS09985 21121d53c06b82ec32c3d0ccf8adc7b3 489 PIRSF PIRSF000538 2 489 4.5E-149 T 20-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMC99_RS09985 21121d53c06b82ec32c3d0ccf8adc7b3 489 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 487 6.9E-182 T 20-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMC99_RS09985 21121d53c06b82ec32c3d0ccf8adc7b3 489 PANTHER PTHR10196:SF69 1 485 2.8E-191 T 20-04-2016 AMC99_RS02550 a1ce499d173cd6fbc30256a043f542ce 559 PANTHER PTHR31650 1 479 2.2E-85 T 20-04-2016 AMC99_RS02550 a1ce499d173cd6fbc30256a043f542ce 559 PANTHER PTHR31650:SF3 1 479 2.2E-85 T 20-04-2016 AMC99_RS02550 a1ce499d173cd6fbc30256a043f542ce 559 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 1 465 1.1E-125 T 20-04-2016 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20|UniPathway: UPA00282 AMC99_RS02550 a1ce499d173cd6fbc30256a043f542ce 559 Pfam PF06974 Protein of unknown function (DUF1298) 309 461 1.1E-32 T 20-04-2016 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20|UniPathway: UPA00282 AMC99_RS02550 a1ce499d173cd6fbc30256a043f542ce 559 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 1 269 4.4E-62 T 20-04-2016 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20|UniPathway: UPA00282 AMC99_RS02550 a1ce499d173cd6fbc30256a043f542ce 559 SUPERFAMILY SSF52777 55 161 4.34E-7 T 20-04-2016 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 Pfam PF04998 RNA polymerase Rpb1, domain 5 773 1314 2.2E-73 T 20-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1026 0.0 T 20-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 PANTHER PTHR19376:SF32 1302 1362 0.0 T 20-04-2016 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 PANTHER PTHR19376:SF32 1177 1262 0.0 T 20-04-2016 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 PANTHER PTHR19376:SF32 4 1158 0.0 T 20-04-2016 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 343 9.1E-91 T 20-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 SUPERFAMILY SSF64484 1134 1362 0.0 T 20-04-2016 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 SUPERFAMILY SSF64484 16 950 0.0 T 20-04-2016 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1374 10.313 T 20-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 649 32.128 T 20-04-2016 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 655 3.0E-25 T 20-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 SMART SM00663 236 515 1.4E-180 T 20-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 Gene3D G3DSA:2.40.50.100 1156 1210 3.4E-10 T 20-04-2016 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 Pfam PF05000 RNA polymerase Rpb1, domain 4 684 762 5.8E-17 T 20-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 Gene3D G3DSA:2.40.40.20 350 377 5.0E-37 T 20-04-2016 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 Gene3D G3DSA:2.40.40.20 418 490 5.0E-37 T 20-04-2016 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 PANTHER PTHR19376 1302 1362 0.0 T 20-04-2016 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 PANTHER PTHR19376 1177 1262 0.0 T 20-04-2016 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 PANTHER PTHR19376 4 1158 0.0 T 20-04-2016 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 486 3.7E-27 T 20-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS13695 031b633433cce6d9be55cc890ed9f153 1430 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 392 7.3E-8 T 20-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMC99_RS12330 2dfbd87c88467e9fb5d416318fa37e93 143 PANTHER PTHR11911 14 141 7.3E-33 T 20-04-2016 AMC99_RS12330 2dfbd87c88467e9fb5d416318fa37e93 143 Pfam PF00571 CBS domain 13 61 3.5E-12 T 20-04-2016 IPR000644 CBS domain AMC99_RS12330 2dfbd87c88467e9fb5d416318fa37e93 143 Pfam PF00571 CBS domain 72 124 2.7E-10 T 20-04-2016 IPR000644 CBS domain AMC99_RS12330 2dfbd87c88467e9fb5d416318fa37e93 143 SMART SM00116 79 126 6.7E-8 T 20-04-2016 IPR000644 CBS domain AMC99_RS12330 2dfbd87c88467e9fb5d416318fa37e93 143 SMART SM00116 14 61 1.1E-10 T 20-04-2016 IPR000644 CBS domain AMC99_RS12330 2dfbd87c88467e9fb5d416318fa37e93 143 Gene3D G3DSA:3.10.580.10 10 125 1.1E-32 T 20-04-2016 AMC99_RS12330 2dfbd87c88467e9fb5d416318fa37e93 143 SUPERFAMILY SSF54631 12 141 3.92E-34 T 20-04-2016 AMC99_RS08970 155f92c05a85aec0124b8c774002dd9d 152 Gene3D G3DSA:3.30.1130.10 11 136 5.8E-43 T 20-04-2016 AMC99_RS08970 155f92c05a85aec0124b8c774002dd9d 152 PANTHER PTHR34354 18 145 5.2E-49 T 20-04-2016 AMC99_RS08970 155f92c05a85aec0124b8c774002dd9d 152 SUPERFAMILY SSF55620 24 143 2.45E-25 T 20-04-2016 AMC99_RS08970 155f92c05a85aec0124b8c774002dd9d 152 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 25 131 7.0E-40 T 20-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS08970 155f92c05a85aec0124b8c774002dd9d 152 Pfam PF14489 QueF-like protein 56 134 3.9E-31 T 20-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS08970 155f92c05a85aec0124b8c774002dd9d 152 PANTHER PTHR34354:SF1 18 145 5.2E-49 T 20-04-2016 AMC99_RS08970 155f92c05a85aec0124b8c774002dd9d 152 PIRSF PIRSF027377 2 137 6.3E-49 T 20-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS08970 155f92c05a85aec0124b8c774002dd9d 152 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 152 63.782 T 20-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS07570 6da969344c3da35757d813f129fa096b 123 Pfam PF00164 Ribosomal protein S12/S23 3 123 1.3E-42 T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07570 6da969344c3da35757d813f129fa096b 123 SUPERFAMILY SSF50249 2 123 3.0E-52 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS07570 6da969344c3da35757d813f129fa096b 123 Gene3D G3DSA:2.40.50.140 1 123 1.6E-65 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS07570 6da969344c3da35757d813f129fa096b 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07570 6da969344c3da35757d813f129fa096b 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 40.104 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMC99_RS07570 6da969344c3da35757d813f129fa096b 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.2E-59 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMC99_RS07570 6da969344c3da35757d813f129fa096b 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.2E-59 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMC99_RS07570 6da969344c3da35757d813f129fa096b 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.2E-59 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMC99_RS07570 6da969344c3da35757d813f129fa096b 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.2E-59 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMC99_RS07570 6da969344c3da35757d813f129fa096b 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.2E-59 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMC99_RS07570 6da969344c3da35757d813f129fa096b 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.2E-59 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMC99_RS07570 6da969344c3da35757d813f129fa096b 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 1.9E-67 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMC99_RS07570 6da969344c3da35757d813f129fa096b 123 PIRSF PIRSF002133 1 123 5.1E-55 T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07570 6da969344c3da35757d813f129fa096b 123 PANTHER PTHR11652 1 116 8.8E-75 T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS05730 817999f794f9e5a9fc59d2abdab09366 378 Gene3D G3DSA:3.40.710.10 27 271 9.5E-76 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS05730 817999f794f9e5a9fc59d2abdab09366 378 PANTHER PTHR21581:SF3 27 378 6.4E-76 T 20-04-2016 AMC99_RS05730 817999f794f9e5a9fc59d2abdab09366 378 SUPERFAMILY SSF69189 272 364 1.96E-17 T 20-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS05730 817999f794f9e5a9fc59d2abdab09366 378 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 272 361 1.6E-13 T 20-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS05730 817999f794f9e5a9fc59d2abdab09366 378 PANTHER PTHR21581 27 378 6.4E-76 T 20-04-2016 AMC99_RS05730 817999f794f9e5a9fc59d2abdab09366 378 Gene3D G3DSA:2.60.410.10 272 362 2.9E-17 T 20-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS05730 817999f794f9e5a9fc59d2abdab09366 378 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 25 251 1.5E-54 T 20-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMC99_RS05730 817999f794f9e5a9fc59d2abdab09366 378 SUPERFAMILY SSF56601 26 270 9.44E-61 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS05730 817999f794f9e5a9fc59d2abdab09366 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 54 65 1.4E-11 T 20-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMC99_RS05730 817999f794f9e5a9fc59d2abdab09366 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 110 127 1.4E-11 T 20-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMC99_RS05730 817999f794f9e5a9fc59d2abdab09366 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 137 150 1.4E-11 T 20-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMC99_RS05730 817999f794f9e5a9fc59d2abdab09366 378 SMART SM00936 272 362 3.4E-21 T 20-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS01855 1562c19020749ec89b036c00482870a5 398 Gene3D G3DSA:3.50.50.60 4 157 1.2E-14 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01855 1562c19020749ec89b036c00482870a5 398 Gene3D G3DSA:3.50.50.60 257 298 1.2E-14 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01855 1562c19020749ec89b036c00482870a5 398 TIGRFAM TIGR01790 carotene-cycl: lycopene cyclase family protein 7 384 1.3E-105 T 20-04-2016 IPR010108 Lycopene cyclase, beta/epsilon GO:0016117|GO:0016705 AMC99_RS01855 1562c19020749ec89b036c00482870a5 398 Pfam PF05834 Lycopene cyclase protein 7 384 4.2E-79 T 20-04-2016 AMC99_RS01855 1562c19020749ec89b036c00482870a5 398 SUPERFAMILY SSF51905 4 163 1.3E-18 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01855 1562c19020749ec89b036c00482870a5 398 SUPERFAMILY SSF51905 255 363 1.3E-18 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01855 1562c19020749ec89b036c00482870a5 398 TIGRFAM TIGR01789 lycopene_cycl: lycopene cyclase 7 385 3.3E-151 T 20-04-2016 IPR008461 Lycopene cyclase GO:0016117|GO:0045436 AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 179 207 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 182 4.5E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 264 284 4.5E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 130 4.5E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 211 4.5E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 41 58 4.5E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 230 4.5E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 Gene3D G3DSA:3.40.50.720 38 304 2.5E-56 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 PANTHER PTHR24322 192 226 1.8E-42 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 PANTHER PTHR24322 44 176 1.8E-42 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 Pfam PF00106 short chain dehydrogenase 40 233 4.9E-42 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 SUPERFAMILY SSF51735 35 235 4.6E-55 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 SUPERFAMILY SSF51735 264 301 4.6E-55 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 130 2.2E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 192 211 2.2E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS05365 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 180 2.2E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS00945 097e55f914cc8b7fb07b623b1071e393 238 Gene3D G3DSA:3.40.50.300 9 231 1.3E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00945 097e55f914cc8b7fb07b623b1071e393 238 SUPERFAMILY SSF52540 10 231 1.54E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00945 097e55f914cc8b7fb07b623b1071e393 238 Pfam PF00005 ABC transporter 29 178 2.2E-33 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS00945 097e55f914cc8b7fb07b623b1071e393 238 PANTHER PTHR24220 11 231 6.3E-86 T 20-04-2016 AMC99_RS00945 097e55f914cc8b7fb07b623b1071e393 238 SMART SM00382 38 226 4.7E-18 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS00945 097e55f914cc8b7fb07b623b1071e393 238 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_RS08405 a1ee8a978a2be2617e163d9846497188 950 Pfam PF05193 Peptidase M16 inactive domain 222 399 1.2E-12 T 20-04-2016 IPR007863 Peptidase M16, C-terminal AMC99_RS08405 a1ee8a978a2be2617e163d9846497188 950 Pfam PF05193 Peptidase M16 inactive domain 713 874 4.0E-14 T 20-04-2016 IPR007863 Peptidase M16, C-terminal AMC99_RS08405 a1ee8a978a2be2617e163d9846497188 950 PANTHER PTHR11851:SF144 51 925 2.0E-115 T 20-04-2016 AMC99_RS08405 a1ee8a978a2be2617e163d9846497188 950 Gene3D G3DSA:3.30.830.10 518 744 4.6E-21 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMC99_RS08405 a1ee8a978a2be2617e163d9846497188 950 Gene3D G3DSA:3.30.830.10 41 270 1.2E-45 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMC99_RS08405 a1ee8a978a2be2617e163d9846497188 950 Gene3D G3DSA:3.30.830.10 763 933 3.5E-15 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMC99_RS08405 a1ee8a978a2be2617e163d9846497188 950 SUPERFAMILY SSF63411 513 740 2.79E-26 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_RS08405 a1ee8a978a2be2617e163d9846497188 950 SUPERFAMILY SSF63411 46 259 2.44E-42 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_RS08405 a1ee8a978a2be2617e163d9846497188 950 Pfam PF00675 Insulinase (Peptidase family M16) 60 183 7.0E-27 T 20-04-2016 IPR011765 Peptidase M16, N-terminal AMC99_RS08405 a1ee8a978a2be2617e163d9846497188 950 SUPERFAMILY SSF63411 313 456 4.83E-5 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_RS08405 a1ee8a978a2be2617e163d9846497188 950 PANTHER PTHR11851 51 925 2.0E-115 T 20-04-2016 AMC99_RS08405 a1ee8a978a2be2617e163d9846497188 950 SUPERFAMILY SSF63411 770 943 3.17E-23 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_RS08405 a1ee8a978a2be2617e163d9846497188 950 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 80 103 - T 20-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AMC99_RS03190 dad2d459ca8946df86c9965083985a72 190 Gene3D G3DSA:1.10.260.40 3 76 7.7E-16 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS03190 dad2d459ca8946df86c9965083985a72 190 SMART SM00530 4 61 2.6E-12 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS03190 dad2d459ca8946df86c9965083985a72 190 SUPERFAMILY SSF47413 3 69 1.33E-12 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS03190 dad2d459ca8946df86c9965083985a72 190 Pfam PF01381 Helix-turn-helix 5 60 4.4E-10 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 SUPERFAMILY SSF55073 346 502 2.59E-39 T 20-04-2016 IPR029787 Nucleotide cyclase AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 PANTHER PTHR33121:SF13 6 15 1.6E-78 T 20-04-2016 AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 PANTHER PTHR33121:SF13 460 753 1.6E-78 T 20-04-2016 AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 Gene3D G3DSA:3.30.70.270 343 508 4.8E-46 T 20-04-2016 AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 SUPERFAMILY SSF141868 517 758 8.89E-91 T 20-04-2016 IPR001633 EAL domain AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 Pfam PF00990 Diguanylate cyclase, GGDEF domain 343 495 2.6E-35 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 Pfam PF00563 EAL domain 517 747 6.6E-77 T 20-04-2016 IPR001633 EAL domain AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 SMART SM00304 284 335 1.5E-6 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 Pfam PF00672 HAMP domain 265 331 1.5E-13 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 Gene3D G3DSA:3.20.20.450 514 758 3.6E-99 T 20-04-2016 IPR001633 EAL domain AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 341 498 7.3E-35 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 SUPERFAMILY SSF158472 284 332 2.88E-6 T 20-04-2016 AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 SMART SM00052 510 752 9.2E-119 T 20-04-2016 IPR001633 EAL domain AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 PANTHER PTHR33121 6 15 1.6E-78 T 20-04-2016 AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 PANTHER PTHR33121 460 753 1.6E-78 T 20-04-2016 AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 SMART SM00267 330 500 1.1E-44 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS10295 a4521fb93d25c2d8b8cac17e36b3efe3 769 Pfam PF05228 CHASE4 domain 109 192 3.1E-6 T 20-04-2016 IPR007892 CHASE4 AMC99_RS00455 2e91834364b2abdb2ce858f79284f895 152 SUPERFAMILY SSF54427 27 145 7.21E-22 T 20-04-2016 IPR032710 NTF2-like domain AMC99_RS00455 2e91834364b2abdb2ce858f79284f895 152 Pfam PF13474 SnoaL-like domain 31 146 1.2E-14 T 20-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain AMC99_RS00455 2e91834364b2abdb2ce858f79284f895 152 Gene3D G3DSA:3.10.450.50 26 145 6.8E-34 T 20-04-2016 IPR032710 NTF2-like domain AMC99_RS02415 c0263fef2dea72490f1523e70aa75378 333 SUPERFAMILY SSF53474 87 329 4.19E-38 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS02415 c0263fef2dea72490f1523e70aa75378 333 Pfam PF00326 Prolyl oligopeptidase family 249 309 7.1E-8 T 20-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMC99_RS02415 c0263fef2dea72490f1523e70aa75378 333 Gene3D G3DSA:3.40.50.1820 86 328 4.8E-63 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS02415 c0263fef2dea72490f1523e70aa75378 333 PANTHER PTHR23024 88 330 1.1E-44 T 20-04-2016 AMC99_RS02415 c0263fef2dea72490f1523e70aa75378 333 PANTHER PTHR23024:SF41 88 330 1.1E-44 T 20-04-2016 AMC99_RS11175 44d3247e1b77998b625a53ccaabfa467 298 Gene3D G3DSA:3.40.50.1820 1 290 1.6E-69 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS11175 44d3247e1b77998b625a53ccaabfa467 298 Pfam PF00561 alpha/beta hydrolase fold 22 275 7.4E-23 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS11175 44d3247e1b77998b625a53ccaabfa467 298 PANTHER PTHR10992:SF732 88 293 2.8E-49 T 20-04-2016 AMC99_RS11175 44d3247e1b77998b625a53ccaabfa467 298 PANTHER PTHR10992:SF732 4 67 2.8E-49 T 20-04-2016 AMC99_RS11175 44d3247e1b77998b625a53ccaabfa467 298 PANTHER PTHR10992 88 293 2.8E-49 T 20-04-2016 AMC99_RS11175 44d3247e1b77998b625a53ccaabfa467 298 PANTHER PTHR10992 4 67 2.8E-49 T 20-04-2016 AMC99_RS11175 44d3247e1b77998b625a53ccaabfa467 298 SUPERFAMILY SSF53474 1 289 2.72E-65 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS10705 d299559b0e91226e3cca5a78cb000870 178 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 3.97E-19 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMC99_RS10705 d299559b0e91226e3cca5a78cb000870 178 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 3.97E-19 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMC99_RS10705 d299559b0e91226e3cca5a78cb000870 178 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 3.97E-19 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMC99_RS10705 d299559b0e91226e3cca5a78cb000870 178 Pfam PF00467 KOW motif 127 156 8.3E-6 T 20-04-2016 IPR005824 KOW AMC99_RS10705 d299559b0e91226e3cca5a78cb000870 178 SUPERFAMILY SSF50104 121 175 4.13E-19 T 20-04-2016 IPR008991 Translation protein SH3-like domain AMC99_RS10705 d299559b0e91226e3cca5a78cb000870 178 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 175 1.1E-62 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMC99_RS10705 d299559b0e91226e3cca5a78cb000870 178 Gene3D G3DSA:3.30.70.940 2 110 1.5E-37 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 AMC99_RS10705 d299559b0e91226e3cca5a78cb000870 178 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 177 23.841 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMC99_RS10705 d299559b0e91226e3cca5a78cb000870 178 SMART SM00738 1 109 3.0E-39 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 AMC99_RS10705 d299559b0e91226e3cca5a78cb000870 178 SMART SM00739 123 150 9.1E-4 T 20-04-2016 IPR005824 KOW AMC99_RS10705 d299559b0e91226e3cca5a78cb000870 178 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 20-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AMC99_RS10705 d299559b0e91226e3cca5a78cb000870 178 Gene3D G3DSA:2.30.30.30 117 175 1.6E-28 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 AMC99_RS10705 d299559b0e91226e3cca5a78cb000870 178 Pfam PF02357 Transcription termination factor nusG 3 103 4.9E-23 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 AMC99_RS10705 d299559b0e91226e3cca5a78cb000870 178 PANTHER PTHR30265 3 177 3.7E-62 T 20-04-2016 AMC99_RS10705 d299559b0e91226e3cca5a78cb000870 178 SUPERFAMILY SSF82679 1 104 4.58E-33 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 AMC99_RS04315 e6300d2267790fddd867734d3873361e 148 Gene3D G3DSA:1.20.120.550 9 136 3.5E-5 T 20-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AMC99_RS04315 e6300d2267790fddd867734d3873361e 148 SUPERFAMILY SSF161084 5 134 6.08E-17 T 20-04-2016 AMC99_RS04315 e6300d2267790fddd867734d3873361e 148 Pfam PF01124 MAPEG family 6 136 1.8E-22 T 20-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AMC99_RS09965 2e7d5e768fcf1e6b665b4a03a9b66525 276 SUPERFAMILY SSF47413 18 82 6.88E-5 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS09965 2e7d5e768fcf1e6b665b4a03a9b66525 276 Pfam PF13464 Domain of unknown function (DUF4115) 189 244 3.4E-9 T 20-04-2016 IPR025194 Domain of unknown function DUF4115 AMC99_RS09965 2e7d5e768fcf1e6b665b4a03a9b66525 276 Gene3D G3DSA:1.10.260.40 18 90 9.8E-7 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS09965 2e7d5e768fcf1e6b665b4a03a9b66525 276 Pfam PF13413 Helix-turn-helix domain 21 81 2.8E-24 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS09965 2e7d5e768fcf1e6b665b4a03a9b66525 276 PANTHER PTHR34475 4 135 3.0E-22 T 20-04-2016 AMC99_RS09965 2e7d5e768fcf1e6b665b4a03a9b66525 276 PANTHER PTHR34475:SF1 4 135 3.0E-22 T 20-04-2016 AMC99_RS04965 8ef89c0f84084f62e6cb20c828c30ce1 262 SUPERFAMILY SSF52540 16 248 3.63E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04965 8ef89c0f84084f62e6cb20c828c30ce1 262 PANTHER PTHR24220:SF585 16 261 4.2E-131 T 20-04-2016 AMC99_RS04965 8ef89c0f84084f62e6cb20c828c30ce1 262 SMART SM00382 39 233 4.0E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS04965 8ef89c0f84084f62e6cb20c828c30ce1 262 PANTHER PTHR24220 16 261 4.2E-131 T 20-04-2016 AMC99_RS04965 8ef89c0f84084f62e6cb20c828c30ce1 262 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 15 262 1.1E-120 T 20-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AMC99_RS04965 8ef89c0f84084f62e6cb20c828c30ce1 262 Gene3D G3DSA:3.40.50.300 16 257 1.4E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04965 8ef89c0f84084f62e6cb20c828c30ce1 262 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_RS04965 8ef89c0f84084f62e6cb20c828c30ce1 262 Pfam PF00005 ABC transporter 31 186 7.7E-30 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS04215 ea370010f33a8a8c8e4908f4e1189433 140 Pfam PF00334 Nucleoside diphosphate kinase 5 138 8.4E-53 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_RS04215 ea370010f33a8a8c8e4908f4e1189433 140 Gene3D G3DSA:3.30.70.141 2 139 4.2E-55 T 20-04-2016 AMC99_RS04215 ea370010f33a8a8c8e4908f4e1189433 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.047 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_RS04215 ea370010f33a8a8c8e4908f4e1189433 140 PANTHER PTHR11349 5 139 2.6E-64 T 20-04-2016 AMC99_RS04215 ea370010f33a8a8c8e4908f4e1189433 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.4E-36 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_RS04215 ea370010f33a8a8c8e4908f4e1189433 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.4E-36 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_RS04215 ea370010f33a8a8c8e4908f4e1189433 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.4E-36 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_RS04215 ea370010f33a8a8c8e4908f4e1189433 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.4E-36 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_RS04215 ea370010f33a8a8c8e4908f4e1189433 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.4E-36 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_RS04215 ea370010f33a8a8c8e4908f4e1189433 140 SUPERFAMILY SSF54919 1 139 2.49E-55 T 20-04-2016 AMC99_RS04215 ea370010f33a8a8c8e4908f4e1189433 140 SMART SM00562 3 140 4.8E-77 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_RS11095 f7482f008a5c064e00bc3886a0335c23 203 SUPERFAMILY SSF88697 4 188 2.09E-44 T 20-04-2016 IPR015947 PUA-like domain AMC99_RS11095 f7482f008a5c064e00bc3886a0335c23 203 SMART SM00464 4 189 2.6E-18 T 20-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AMC99_RS11095 f7482f008a5c064e00bc3886a0335c23 203 PANTHER PTHR10046 4 188 2.0E-17 T 20-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 AMC99_RS11095 f7482f008a5c064e00bc3886a0335c23 203 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 5 188 1.6E-26 T 20-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AMC99_RS12725 debba7ce497a5221837e170f69329e02 367 Pfam PF13439 Glycosyltransferase Family 4 13 174 2.0E-22 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMC99_RS12725 debba7ce497a5221837e170f69329e02 367 Gene3D G3DSA:3.40.50.2000 185 333 4.2E-24 T 20-04-2016 AMC99_RS12725 debba7ce497a5221837e170f69329e02 367 PANTHER PTHR12526 1 367 3.6E-50 T 20-04-2016 AMC99_RS12725 debba7ce497a5221837e170f69329e02 367 Pfam PF00534 Glycosyl transferases group 1 186 334 5.3E-23 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 AMC99_RS12725 debba7ce497a5221837e170f69329e02 367 SUPERFAMILY SSF53756 1 362 2.45E-69 T 20-04-2016 AMC99_RS12670 22625f117d0051a8a359bd677b870555 433 PANTHER PTHR30576:SF0 238 433 2.6E-76 T 20-04-2016 AMC99_RS12670 22625f117d0051a8a359bd677b870555 433 PANTHER PTHR30576 238 433 2.6E-76 T 20-04-2016 AMC99_RS12670 22625f117d0051a8a359bd677b870555 433 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 160 432 1.2E-89 T 20-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMC99_RS12670 22625f117d0051a8a359bd677b870555 433 Pfam PF02397 Bacterial sugar transferase 239 427 1.5E-54 T 20-04-2016 IPR003362 Bacterial sugar transferase AMC99_RS07500 0f666284ddc9d47ba417316e871468d1 96 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 1 79 24.581 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07500 0f666284ddc9d47ba417316e871468d1 96 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 1.1E-13 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07500 0f666284ddc9d47ba417316e871468d1 96 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 1.1E-13 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07500 0f666284ddc9d47ba417316e871468d1 96 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 1.1E-13 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07500 0f666284ddc9d47ba417316e871468d1 96 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 73 7.8E-36 T 20-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07500 0f666284ddc9d47ba417316e871468d1 96 Gene3D G3DSA:2.40.50.140 1 85 3.4E-35 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS07500 0f666284ddc9d47ba417316e871468d1 96 Pfam PF00366 Ribosomal protein S17 8 73 9.3E-32 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07500 0f666284ddc9d47ba417316e871468d1 96 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 73 3.0E-22 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07500 0f666284ddc9d47ba417316e871468d1 96 SUPERFAMILY SSF50249 3 86 4.71E-32 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS07500 0f666284ddc9d47ba417316e871468d1 96 PANTHER PTHR10744 1 82 4.4E-35 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07500 0f666284ddc9d47ba417316e871468d1 96 ProSitePatterns PS00056 Ribosomal protein S17 signature. 54 66 - T 20-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS02645 2116809c9e922a679addc3875300fca6 224 PANTHER PTHR38011 3 195 1.5E-42 T 20-04-2016 AMC99_RS02645 2116809c9e922a679addc3875300fca6 224 SUPERFAMILY SSF53597 4 192 1.83E-20 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain AMC99_RS02645 2116809c9e922a679addc3875300fca6 224 PANTHER PTHR38011:SF2 3 195 1.5E-42 T 20-04-2016 AMC99_RS02645 2116809c9e922a679addc3875300fca6 224 Gene3D G3DSA:3.40.430.10 57 191 6.6E-19 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain AMC99_RS02645 2116809c9e922a679addc3875300fca6 224 Pfam PF01872 RibD C-terminal domain 5 186 4.3E-16 T 20-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMC99_RS12010 f2110827e61fe22c3ae175f8e20474ff 148 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 30 137 3.7E-33 T 20-04-2016 IPR018673 Protein of unknown function DUF2141 AMC99_RS06780 7aa62598552794677910e90887b6d012 212 Gene3D G3DSA:1.20.1050.10 109 207 1.3E-15 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS06780 7aa62598552794677910e90887b6d012 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 140 196 5.6E-6 T 20-04-2016 IPR004046 Glutathione S-transferase, C-terminal AMC99_RS06780 7aa62598552794677910e90887b6d012 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 6 75 1.1E-13 T 20-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_RS06780 7aa62598552794677910e90887b6d012 212 SUPERFAMILY SSF47616 91 203 1.81E-20 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS06780 7aa62598552794677910e90887b6d012 212 Gene3D G3DSA:3.40.30.10 6 84 7.9E-18 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS06780 7aa62598552794677910e90887b6d012 212 SUPERFAMILY SSF52833 5 82 8.7E-18 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS06780 7aa62598552794677910e90887b6d012 212 PANTHER PTHR11260 6 202 2.9E-36 T 20-04-2016 AMC99_RS06780 7aa62598552794677910e90887b6d012 212 PANTHER PTHR11260:SF253 6 202 2.9E-36 T 20-04-2016 AMC99_RS05515 a493a7e7451414791eeb6ea9a785eafe 402 PANTHER PTHR11614:SF108 13 253 1.2E-65 T 20-04-2016 AMC99_RS05515 a493a7e7451414791eeb6ea9a785eafe 402 SUPERFAMILY SSF82784 230 397 2.49E-42 T 20-04-2016 IPR003718 OsmC/Ohr family AMC99_RS05515 a493a7e7451414791eeb6ea9a785eafe 402 Pfam PF12146 Serine aminopeptidase, S33 43 131 1.6E-10 T 20-04-2016 IPR022742 Serine aminopeptidase, S33 AMC99_RS05515 a493a7e7451414791eeb6ea9a785eafe 402 Gene3D G3DSA:3.40.50.1820 1 230 4.0E-32 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS05515 a493a7e7451414791eeb6ea9a785eafe 402 Pfam PF02566 OsmC-like protein 296 396 3.6E-18 T 20-04-2016 IPR003718 OsmC/Ohr family AMC99_RS05515 a493a7e7451414791eeb6ea9a785eafe 402 PANTHER PTHR11614 13 253 1.2E-65 T 20-04-2016 AMC99_RS05515 a493a7e7451414791eeb6ea9a785eafe 402 Gene3D G3DSA:3.30.300.20 231 391 1.0E-49 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta AMC99_RS05515 a493a7e7451414791eeb6ea9a785eafe 402 SUPERFAMILY SSF53474 1 140 1.02E-41 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS05515 a493a7e7451414791eeb6ea9a785eafe 402 SUPERFAMILY SSF53474 184 253 1.02E-41 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS03225 ec0db466d2608588c981d98031d3ce28 447 Gene3D G3DSA:3.30.565.10 310 445 1.7E-28 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS03225 ec0db466d2608588c981d98031d3ce28 447 SUPERFAMILY SSF55874 310 446 7.6E-29 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS03225 ec0db466d2608588c981d98031d3ce28 447 SMART SM00387 338 447 2.2E-23 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS03225 ec0db466d2608588c981d98031d3ce28 447 Pfam PF08521 Two-component sensor kinase N-terminal 20 158 1.0E-6 T 20-04-2016 IPR013727 Two-component sensor kinase, N-terminal AMC99_RS03225 ec0db466d2608588c981d98031d3ce28 447 PANTHER PTHR24423:SF496 1 8 6.3E-43 T 20-04-2016 AMC99_RS03225 ec0db466d2608588c981d98031d3ce28 447 PANTHER PTHR24423 1 8 6.3E-43 T 20-04-2016 AMC99_RS03225 ec0db466d2608588c981d98031d3ce28 447 PANTHER PTHR24423:SF496 183 446 6.3E-43 T 20-04-2016 AMC99_RS03225 ec0db466d2608588c981d98031d3ce28 447 PANTHER PTHR24423 183 446 6.3E-43 T 20-04-2016 AMC99_RS03225 ec0db466d2608588c981d98031d3ce28 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 443 9.6E-16 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS03225 ec0db466d2608588c981d98031d3ce28 447 SUPERFAMILY SSF47384 222 292 3.34E-5 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS03225 ec0db466d2608588c981d98031d3ce28 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 8.6E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS03225 ec0db466d2608588c981d98031d3ce28 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 8.6E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS03225 ec0db466d2608588c981d98031d3ce28 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 8.6E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS06230 75438a246bda4f9a8be743fc5ad8961c 255 Pfam PF12804 MobA-like NTP transferase domain 10 131 1.3E-17 T 20-04-2016 IPR025877 MobA-like NTP transferase AMC99_RS06230 75438a246bda4f9a8be743fc5ad8961c 255 SUPERFAMILY SSF53448 7 245 6.34E-34 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS06230 75438a246bda4f9a8be743fc5ad8961c 255 Gene3D G3DSA:3.90.550.10 8 253 1.4E-19 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS11525 373279da2d11492e741bd8e699cafbcb 313 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 142 153 - T 20-04-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 AMC99_RS11525 373279da2d11492e741bd8e699cafbcb 313 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 42 274 3.4E-89 T 20-04-2016 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158|UniPathway: UPA00139 AMC99_RS11525 373279da2d11492e741bd8e699cafbcb 313 SUPERFAMILY SSF56534 26 295 1.15E-93 T 20-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMC99_RS11525 373279da2d11492e741bd8e699cafbcb 313 Gene3D G3DSA:1.10.800.10 29 303 6.1E-89 T 20-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 AMC99_RS11525 373279da2d11492e741bd8e699cafbcb 313 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 41 262 3.6E-40 T 20-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMC99_RS11525 373279da2d11492e741bd8e699cafbcb 313 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 237 256 1.7E-8 T 20-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMC99_RS11525 373279da2d11492e741bd8e699cafbcb 313 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 99 121 1.7E-8 T 20-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMC99_RS11525 373279da2d11492e741bd8e699cafbcb 313 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 205 223 1.7E-8 T 20-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMC99_RS11525 373279da2d11492e741bd8e699cafbcb 313 PANTHER PTHR11473 41 258 7.9E-63 T 20-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 AMC99_RS11525 373279da2d11492e741bd8e699cafbcb 313 PANTHER PTHR11473:SF24 41 258 7.9E-63 T 20-04-2016 AMC99_RS05950 1b4b7a69d60b1a38af295678f6d316c9 644 Pfam PF13145 PPIC-type PPIASE domain 253 372 1.6E-18 T 20-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AMC99_RS05950 1b4b7a69d60b1a38af295678f6d316c9 644 PANTHER PTHR10657 207 520 5.1E-31 T 20-04-2016 AMC99_RS05950 1b4b7a69d60b1a38af295678f6d316c9 644 PANTHER PTHR10657 43 180 5.1E-31 T 20-04-2016 AMC99_RS05950 1b4b7a69d60b1a38af295678f6d316c9 644 Gene3D G3DSA:3.10.50.40 269 384 3.5E-12 T 20-04-2016 AMC99_RS05950 1b4b7a69d60b1a38af295678f6d316c9 644 PANTHER PTHR10657:SF13 207 520 5.1E-31 T 20-04-2016 AMC99_RS05950 1b4b7a69d60b1a38af295678f6d316c9 644 PANTHER PTHR10657:SF13 43 180 5.1E-31 T 20-04-2016 AMC99_RS05950 1b4b7a69d60b1a38af295678f6d316c9 644 SUPERFAMILY SSF54534 273 359 3.66E-9 T 20-04-2016 AMC99_RS05950 1b4b7a69d60b1a38af295678f6d316c9 644 Pfam PF13624 SurA N-terminal domain 1 169 1.1E-29 T 20-04-2016 AMC99_RS05950 1b4b7a69d60b1a38af295678f6d316c9 644 SUPERFAMILY SSF109998 47 173 2.75E-17 T 20-04-2016 IPR027304 Trigger factor/SurA domain AMC99_RS05950 1b4b7a69d60b1a38af295678f6d316c9 644 SUPERFAMILY SSF109998 247 296 2.75E-17 T 20-04-2016 IPR027304 Trigger factor/SurA domain AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 20-04-2016 IPR018181 Heat shock protein 70, conserved site AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 Gene3D G3DSA:3.30.420.40 4 52 5.0E-68 T 20-04-2016 AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 Gene3D G3DSA:3.30.420.40 119 191 5.0E-68 T 20-04-2016 AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 PANTHER PTHR19375:SF173 2 638 0.0 T 20-04-2016 AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 468 484 5.3E-82 T 20-04-2016 IPR013126 Heat shock protein 70 family AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 333 349 5.3E-82 T 20-04-2016 IPR013126 Heat shock protein 70 family AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 387 406 5.3E-82 T 20-04-2016 IPR013126 Heat shock protein 70 family AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 54 62 5.3E-82 T 20-04-2016 IPR013126 Heat shock protein 70 family AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.3E-82 T 20-04-2016 IPR013126 Heat shock protein 70 family AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 138 158 5.3E-82 T 20-04-2016 IPR013126 Heat shock protein 70 family AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.3E-82 T 20-04-2016 IPR013126 Heat shock protein 70 family AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 364 384 5.3E-82 T 20-04-2016 IPR013126 Heat shock protein 70 family AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 197 207 5.3E-82 T 20-04-2016 IPR013126 Heat shock protein 70 family AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 Pfam PF00012 Hsp70 protein 4 603 2.6E-271 T 20-04-2016 IPR013126 Heat shock protein 70 family AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 SUPERFAMILY SSF53067 186 381 1.23E-65 T 20-04-2016 AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 Gene3D G3DSA:3.30.30.30 53 105 2.2E-28 T 20-04-2016 AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 2.1E-293 T 20-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 Gene3D G3DSA:3.90.640.10 225 314 2.6E-27 T 20-04-2016 AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 SUPERFAMILY SSF100934 506 604 2.09E-18 T 20-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 PANTHER PTHR19375 2 638 0.0 T 20-04-2016 AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 Gene3D G3DSA:1.20.1270.10 531 602 2.2E-29 T 20-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 SUPERFAMILY SSF100920 383 539 5.49E-63 T 20-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 37.309 T 20-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 SUPERFAMILY SSF53067 4 184 1.17E-68 T 20-04-2016 AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 Gene3D G3DSA:3.30.420.40 318 360 8.0E-38 T 20-04-2016 AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 Gene3D G3DSA:3.30.420.40 192 224 8.0E-38 T 20-04-2016 AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 Gene3D G3DSA:2.60.34.10 389 530 1.2E-73 T 20-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 20-04-2016 IPR018181 Heat shock protein 70, conserved site AMC99_RS05620 5353315db9ee11c39cdb9fc39b846a00 640 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 20-04-2016 IPR018181 Heat shock protein 70, conserved site AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 SUPERFAMILY SSF82051 2 158 2.09E-53 T 20-04-2016 IPR006169 GTP1/OBG domain GO:0005525 AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 Gene3D G3DSA:2.70.210.12 2 155 5.8E-55 T 20-04-2016 IPR006169 GTP1/OBG domain GO:0005525 AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 328 2.2E-136 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 Pfam PF01926 50S ribosome-binding GTPase 161 283 8.6E-26 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 Hamap MF_01454 GTPase Obg [obg]. 2 330 45.113 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 4.4E-33 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 4.4E-33 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 4.4E-33 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 4.4E-33 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 PANTHER PTHR11702:SF3 1 352 1.8E-144 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 Pfam PF01018 GTP1/OBG 3 158 8.0E-58 T 20-04-2016 IPR006169 GTP1/OBG domain GO:0005525 AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 PANTHER PTHR11702 1 352 1.8E-144 T 20-04-2016 AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 PIRSF PIRSF002401 1 355 2.0E-129 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 SUPERFAMILY SSF52540 151 344 1.29E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 20-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 161 325 1.6E-14 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_RS09040 7959e35fe257aa29824889f334c2a4c8 357 Gene3D G3DSA:3.40.50.300 156 341 2.2E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08515 19d379fbd8bfc3c789e25e7c62ed0819 400 Pfam PF13229 Right handed beta helix region 92 282 2.4E-17 T 20-04-2016 AMC99_RS08515 19d379fbd8bfc3c789e25e7c62ed0819 400 Gene3D G3DSA:2.160.20.10 9 286 4.5E-31 T 20-04-2016 IPR012334 Pectin lyase fold AMC99_RS08515 19d379fbd8bfc3c789e25e7c62ed0819 400 SUPERFAMILY SSF51126 20 300 7.39E-43 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor AMC99_RS08515 19d379fbd8bfc3c789e25e7c62ed0819 400 TIGRFAM TIGR03805 beta_helix_1: parallel beta-helix repeat-containing protein 34 339 1.0E-123 T 20-04-2016 IPR022442 Parallel beta-helix repeat-containing domain AMC99_RS08515 19d379fbd8bfc3c789e25e7c62ed0819 400 SMART SM00710 95 117 140.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat AMC99_RS08515 19d379fbd8bfc3c789e25e7c62ed0819 400 SMART SM00710 223 261 2900.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat AMC99_RS08515 19d379fbd8bfc3c789e25e7c62ed0819 400 SMART SM00710 193 214 1300.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat AMC99_RS08515 19d379fbd8bfc3c789e25e7c62ed0819 400 SMART SM00710 148 170 15.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat AMC99_RS08515 19d379fbd8bfc3c789e25e7c62ed0819 400 SMART SM00710 262 284 1200.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat AMC99_RS08515 19d379fbd8bfc3c789e25e7c62ed0819 400 SMART SM00710 171 192 150.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat AMC99_RS08515 19d379fbd8bfc3c789e25e7c62ed0819 400 SMART SM00710 118 147 7700.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat AMC99_RS13015 e9748e47eecf22138d68484d8dbe52a1 627 SUPERFAMILY SSF51735 405 485 1.1E-7 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS13015 e9748e47eecf22138d68484d8dbe52a1 627 Pfam PF00999 Sodium/hydrogen exchanger family 13 390 1.2E-37 T 20-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMC99_RS13015 e9748e47eecf22138d68484d8dbe52a1 627 PANTHER PTHR32507:SF0 1 618 6.8E-135 T 20-04-2016 AMC99_RS13015 e9748e47eecf22138d68484d8dbe52a1 627 PANTHER PTHR32507 1 618 6.8E-135 T 20-04-2016 AMC99_RS13015 e9748e47eecf22138d68484d8dbe52a1 627 Pfam PF02254 TrkA-N domain 406 485 7.7E-8 T 20-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMC99_RS13015 e9748e47eecf22138d68484d8dbe52a1 627 Gene3D G3DSA:3.40.50.720 405 485 4.6E-9 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08430 513fabe445c0883341d890a934ec2da9 607 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 607 39.454 T 20-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 AMC99_RS08430 513fabe445c0883341d890a934ec2da9 607 PANTHER PTHR10937 1 607 0.0 T 20-04-2016 AMC99_RS08430 513fabe445c0883341d890a934ec2da9 607 PANTHER PTHR10937:SF0 1 607 0.0 T 20-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 AMC99_RS08430 513fabe445c0883341d890a934ec2da9 607 Pfam PF01380 SIS domain 287 413 5.8E-28 T 20-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMC99_RS08430 513fabe445c0883341d890a934ec2da9 607 Pfam PF01380 SIS domain 459 588 1.8E-25 T 20-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMC99_RS08430 513fabe445c0883341d890a934ec2da9 607 Gene3D G3DSA:3.40.50.10490 441 607 2.5E-68 T 20-04-2016 AMC99_RS08430 513fabe445c0883341d890a934ec2da9 607 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 607 4.4E-244 T 20-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 AMC99_RS08430 513fabe445c0883341d890a934ec2da9 607 Gene3D G3DSA:3.60.20.10 2 234 9.0E-76 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS08430 513fabe445c0883341d890a934ec2da9 607 SUPERFAMILY SSF53697 244 607 2.61E-113 T 20-04-2016 AMC99_RS08430 513fabe445c0883341d890a934ec2da9 607 Gene3D G3DSA:3.40.50.10490 243 440 5.1E-71 T 20-04-2016 AMC99_RS08430 513fabe445c0883341d890a934ec2da9 607 Pfam PF13522 Glutamine amidotransferase domain 64 192 1.9E-23 T 20-04-2016 AMC99_RS08430 513fabe445c0883341d890a934ec2da9 607 SUPERFAMILY SSF56235 2 233 8.15E-73 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 30 260 1.5E-37 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 113 125 1.1E-22 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 43 59 1.1E-22 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 213 232 1.1E-22 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 PANTHER PTHR12383 13 75 2.7E-47 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 PANTHER PTHR12383 195 298 2.7E-47 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 ProSitePatterns PS00760 Signal peptidases I lysine active site. 115 127 - T 20-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 PANTHER PTHR12383 93 159 2.7E-47 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 Pfam PF00717 Peptidase S24-like 49 136 1.5E-17 T 20-04-2016 IPR019759 Peptidase S24/S26A/S26B AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 PANTHER PTHR12383:SF27 93 159 2.7E-47 T 20-04-2016 AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 PANTHER PTHR12383:SF27 13 75 2.7E-47 T 20-04-2016 AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 PANTHER PTHR12383:SF27 195 298 2.7E-47 T 20-04-2016 AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 Gene3D G3DSA:2.10.109.10 40 123 1.1E-37 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 Gene3D G3DSA:2.10.109.10 213 267 1.1E-37 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 SUPERFAMILY SSF51306 42 282 9.59E-58 T 20-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 ProSitePatterns PS00761 Signal peptidases I signature 3. 218 231 - T 20-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AMC99_RS02725 4664001d1dc6ea2ea65af3924dc863a9 298 ProSitePatterns PS00501 Signal peptidases I serine active site. 52 59 - T 20-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 221 235 - T 20-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 Pfam PF00459 Inositol monophosphatase family 10 270 1.4E-56 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 Gene3D G3DSA:3.40.190.80 161 269 6.5E-35 T 20-04-2016 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR01959 SuhB family inositol monophosphatase signature 208 220 3.2E-20 T 20-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR01959 SuhB family inositol monophosphatase signature 20 42 3.2E-20 T 20-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR01959 SuhB family inositol monophosphatase signature 114 133 3.2E-20 T 20-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR01959 SuhB family inositol monophosphatase signature 166 192 3.2E-20 T 20-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 Gene3D G3DSA:3.30.540.10 6 160 4.0E-46 T 20-04-2016 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 20-04-2016 IPR020583 Inositol monophosphatase, metal-binding site AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 SUPERFAMILY SSF56655 7 268 1.03E-77 T 20-04-2016 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 PANTHER PTHR20854 1 267 7.7E-75 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 218 242 4.1E-51 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 4.1E-51 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 4.1E-51 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 187 208 4.1E-51 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 4.1E-51 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 140 163 4.1E-51 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS04835 bfe4cb63e8bc79259ce21cd4eae30b94 272 PANTHER PTHR20854:SF4 1 267 7.7E-75 T 20-04-2016 AMC99_RS13200 34ce505b34428d77836fc4db20238067 233 Gene3D G3DSA:3.60.10.10 190 229 0.001 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMC99_RS13200 34ce505b34428d77836fc4db20238067 233 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 221 2.6E-18 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMC99_RS13200 34ce505b34428d77836fc4db20238067 233 PANTHER PTHR14859 1 233 2.6E-18 T 20-04-2016 IPR027317 PGAP2-interacting protein AMC99_RS13200 34ce505b34428d77836fc4db20238067 233 Gene3D G3DSA:3.60.10.10 2 159 2.1E-15 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMC99_RS13200 34ce505b34428d77836fc4db20238067 233 PANTHER PTHR14859:SF0 1 233 2.6E-18 T 20-04-2016 AMC99_RS13200 34ce505b34428d77836fc4db20238067 233 SUPERFAMILY SSF56219 2 232 3.53E-37 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMC99_RS07325 3783cfb341681a6e60691c2514e35f90 271 Gene3D G3DSA:3.40.50.1980 31 137 2.8E-10 T 20-04-2016 AMC99_RS07325 3783cfb341681a6e60691c2514e35f90 271 SUPERFAMILY SSF53807 31 264 9.81E-29 T 20-04-2016 AMC99_RS07325 3783cfb341681a6e60691c2514e35f90 271 Gene3D G3DSA:3.40.50.1980 138 255 3.6E-7 T 20-04-2016 AMC99_RS07325 3783cfb341681a6e60691c2514e35f90 271 Pfam PF01497 Periplasmic binding protein 31 238 1.1E-18 T 20-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AMC99_RS02985 be0423f83193185aa84768ec2f29296d 445 SUPERFAMILY SSF82689 342 438 8.76E-30 T 20-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMC99_RS02985 be0423f83193185aa84768ec2f29296d 445 Pfam PF00924 Mechanosensitive ion channel 235 427 3.0E-48 T 20-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMC99_RS02985 be0423f83193185aa84768ec2f29296d 445 PANTHER PTHR30221 184 438 7.7E-67 T 20-04-2016 AMC99_RS02985 be0423f83193185aa84768ec2f29296d 445 SUPERFAMILY SSF82861 189 272 6.54E-6 T 20-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMC99_RS02985 be0423f83193185aa84768ec2f29296d 445 Gene3D G3DSA:3.30.70.100 342 425 6.0E-25 T 20-04-2016 AMC99_RS02985 be0423f83193185aa84768ec2f29296d 445 Gene3D G3DSA:2.30.30.60 289 337 1.6E-14 T 20-04-2016 AMC99_RS02985 be0423f83193185aa84768ec2f29296d 445 SUPERFAMILY SSF50182 273 339 5.23E-16 T 20-04-2016 IPR010920 LSM domain AMC99_RS03605 e585015c9acefcba538be9b633da496f 227 Gene3D G3DSA:3.40.50.150 61 205 3.0E-23 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS03605 e585015c9acefcba538be9b633da496f 227 PANTHER PTHR11558 1 209 5.6E-35 T 20-04-2016 AMC99_RS03605 e585015c9acefcba538be9b633da496f 227 PANTHER PTHR11558:SF4 1 209 5.6E-35 T 20-04-2016 AMC99_RS03605 e585015c9acefcba538be9b633da496f 227 SUPERFAMILY SSF53335 45 209 1.94E-23 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS07210 58befb22dc02bccd58fdf1e0faaa0596 214 SUPERFAMILY SSF50800 3 212 2.93E-57 T 20-04-2016 IPR011037 Pyruvate kinase-like, insert domain AMC99_RS07210 58befb22dc02bccd58fdf1e0faaa0596 214 Gene3D G3DSA:2.40.33.20 4 212 3.2E-63 T 20-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like AMC99_RS07210 58befb22dc02bccd58fdf1e0faaa0596 214 Pfam PF03473 MOSC domain 48 161 2.6E-16 T 20-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AMC99_RS07210 58befb22dc02bccd58fdf1e0faaa0596 214 PANTHER PTHR30212:SF2 22 212 5.4E-42 T 20-04-2016 AMC99_RS07210 58befb22dc02bccd58fdf1e0faaa0596 214 PANTHER PTHR30212 22 212 5.4E-42 T 20-04-2016 AMC99_RS02360 ce4cbead2a8b0f0822ae21ea3de8b2f8 499 SUPERFAMILY SSF103473 20 465 1.7E-29 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS02360 ce4cbead2a8b0f0822ae21ea3de8b2f8 499 PANTHER PTHR11328 4 490 5.0E-66 T 20-04-2016 AMC99_RS02360 ce4cbead2a8b0f0822ae21ea3de8b2f8 499 Pfam PF13347 MFS/sugar transport protein 21 467 2.9E-89 T 20-04-2016 AMC99_RS02360 ce4cbead2a8b0f0822ae21ea3de8b2f8 499 PANTHER PTHR11328:SF24 4 490 5.0E-66 T 20-04-2016 AMC99_RS02360 ce4cbead2a8b0f0822ae21ea3de8b2f8 499 Gene3D G3DSA:1.20.1250.20 26 220 7.5E-10 T 20-04-2016 AMC99_RS02360 ce4cbead2a8b0f0822ae21ea3de8b2f8 499 Gene3D G3DSA:1.20.1250.20 251 471 4.9E-10 T 20-04-2016 AMC99_RS12885 e29a9f686f2694811ee934afc38c5b29 262 Gene3D G3DSA:3.30.540.10 7 154 3.6E-34 T 20-04-2016 AMC99_RS12885 e29a9f686f2694811ee934afc38c5b29 262 Gene3D G3DSA:3.40.190.80 173 252 5.8E-18 T 20-04-2016 AMC99_RS12885 e29a9f686f2694811ee934afc38c5b29 262 PANTHER PTHR20854 42 252 1.4E-35 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS12885 e29a9f686f2694811ee934afc38c5b29 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 131 154 1.1E-16 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS12885 e29a9f686f2694811ee934afc38c5b29 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 164 185 1.1E-16 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS12885 e29a9f686f2694811ee934afc38c5b29 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 196 220 1.1E-16 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS12885 e29a9f686f2694811ee934afc38c5b29 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 1.1E-16 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS12885 e29a9f686f2694811ee934afc38c5b29 262 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 82 95 - T 20-04-2016 IPR020583 Inositol monophosphatase, metal-binding site AMC99_RS12885 e29a9f686f2694811ee934afc38c5b29 262 SUPERFAMILY SSF56655 6 251 4.19E-56 T 20-04-2016 AMC99_RS12885 e29a9f686f2694811ee934afc38c5b29 262 Pfam PF00459 Inositol monophosphatase family 9 231 8.7E-38 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMC99_RS00645 3b79397e96499ce27dc20470cba07751 915 PANTHER PTHR23515:SF6 419 807 1.4E-187 T 20-04-2016 AMC99_RS00645 3b79397e96499ce27dc20470cba07751 915 PANTHER PTHR23515:SF6 828 888 1.4E-187 T 20-04-2016 AMC99_RS00645 3b79397e96499ce27dc20470cba07751 915 Gene3D G3DSA:1.20.1250.20 469 668 6.3E-8 T 20-04-2016 AMC99_RS00645 3b79397e96499ce27dc20470cba07751 915 Gene3D G3DSA:1.20.1250.20 208 416 5.4E-29 T 20-04-2016 AMC99_RS00645 3b79397e96499ce27dc20470cba07751 915 Gene3D G3DSA:1.20.1250.20 688 885 1.0E-13 T 20-04-2016 AMC99_RS00645 3b79397e96499ce27dc20470cba07751 915 SUPERFAMILY SSF103473 10 414 4.05E-62 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS00645 3b79397e96499ce27dc20470cba07751 915 TIGRFAM TIGR00886 2A0108: nitrite transporter 470 846 3.7E-97 T 20-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 AMC99_RS00645 3b79397e96499ce27dc20470cba07751 915 PANTHER PTHR23515 419 807 1.4E-187 T 20-04-2016 AMC99_RS00645 3b79397e96499ce27dc20470cba07751 915 PANTHER PTHR23515 828 888 1.4E-187 T 20-04-2016 AMC99_RS00645 3b79397e96499ce27dc20470cba07751 915 SUPERFAMILY SSF103473 469 888 5.23E-33 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS00645 3b79397e96499ce27dc20470cba07751 915 Pfam PF07690 Major Facilitator Superfamily 479 850 5.3E-13 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS00645 3b79397e96499ce27dc20470cba07751 915 Pfam PF07690 Major Facilitator Superfamily 22 307 1.0E-36 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS00645 3b79397e96499ce27dc20470cba07751 915 Gene3D G3DSA:1.20.1250.20 13 192 1.9E-23 T 20-04-2016 AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 42.366 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 20-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 SUPERFAMILY SSF48592 406 522 1.58E-76 T 20-04-2016 AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 SUPERFAMILY SSF48592 7 134 1.58E-76 T 20-04-2016 AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 PANTHER PTHR11353 3 548 2.4E-263 T 20-04-2016 AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 SUPERFAMILY SSF52029 186 376 4.71E-85 T 20-04-2016 IPR027409 GroEL-like apical domain AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 PRINTS PR00298 60kDa chaperonin signature 83 110 4.9E-74 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 PRINTS PR00298 60kDa chaperonin signature 268 291 4.9E-74 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 PRINTS PR00298 60kDa chaperonin signature 398 419 4.9E-74 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 PRINTS PR00298 60kDa chaperonin signature 350 375 4.9E-74 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 PRINTS PR00298 60kDa chaperonin signature 27 53 4.9E-74 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 Gene3D G3DSA:1.10.560.10 369 519 8.8E-42 T 20-04-2016 IPR027413 GroEL-like equatorial domain AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 Gene3D G3DSA:3.50.7.10 189 368 1.7E-102 T 20-04-2016 IPR027409 GroEL-like apical domain AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 526 2.4E-96 T 20-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 Gene3D G3DSA:1.10.560.10 3 188 9.3E-47 T 20-04-2016 IPR027413 GroEL-like equatorial domain AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 1.5E-259 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMC99_RS13635 34bcd92d575d522349b80106e114b591 548 SUPERFAMILY SSF54849 138 204 1.12E-24 T 20-04-2016 AMC99_RS08615 6f97b2f06cd261b0ebc50db8ab914501 179 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 171 1.6E-51 T 20-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 AMC99_RS08615 6f97b2f06cd261b0ebc50db8ab914501 179 Pfam PF01965 DJ-1/PfpI family 3 169 2.8E-54 T 20-04-2016 IPR002818 DJ-1/PfpI AMC99_RS08615 6f97b2f06cd261b0ebc50db8ab914501 179 Gene3D G3DSA:3.40.50.880 1 174 4.5E-61 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS08615 6f97b2f06cd261b0ebc50db8ab914501 179 PANTHER PTHR11019:SF115 3 177 2.8E-68 T 20-04-2016 AMC99_RS08615 6f97b2f06cd261b0ebc50db8ab914501 179 SUPERFAMILY SSF52317 1 172 1.58E-54 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS08615 6f97b2f06cd261b0ebc50db8ab914501 179 PANTHER PTHR11019 3 177 2.8E-68 T 20-04-2016 AMC99_RS01520 6a6e866a59fcf514a0b2dba787f52800 264 Gene3D G3DSA:1.10.10.10 90 136 1.3E-6 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01520 6a6e866a59fcf514a0b2dba787f52800 264 SUPERFAMILY SSF88659 88 135 1.64E-5 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS01520 6a6e866a59fcf514a0b2dba787f52800 264 PIRSF PIRSF036400 1 263 1.6E-107 T 20-04-2016 IPR014605 Signal transduction response regulator PhyR-like, alphaproteobacteria AMC99_RS01520 6a6e866a59fcf514a0b2dba787f52800 264 PANTHER PTHR26402 141 255 3.9E-24 T 20-04-2016 AMC99_RS01520 6a6e866a59fcf514a0b2dba787f52800 264 SUPERFAMILY SSF52172 142 255 1.85E-21 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS01520 6a6e866a59fcf514a0b2dba787f52800 264 SMART SM00448 141 251 3.7E-14 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS01520 6a6e866a59fcf514a0b2dba787f52800 264 Gene3D G3DSA:3.40.50.2300 138 255 2.7E-20 T 20-04-2016 AMC99_RS01520 6a6e866a59fcf514a0b2dba787f52800 264 Pfam PF00072 Response regulator receiver domain 143 251 8.0E-14 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS01520 6a6e866a59fcf514a0b2dba787f52800 264 PANTHER PTHR26402:SF413 141 255 3.9E-24 T 20-04-2016 AMC99_RS10545 3ec4f743bdcd63bb6f1a9caa801880e2 1505 PANTHER PTHR10887 941 1366 7.0E-50 T 20-04-2016 AMC99_RS10545 3ec4f743bdcd63bb6f1a9caa801880e2 1505 PANTHER PTHR10887 78 83 7.0E-50 T 20-04-2016 AMC99_RS10545 3ec4f743bdcd63bb6f1a9caa801880e2 1505 Pfam PF13245 Part of AAA domain 400 455 1.4E-10 T 20-04-2016 AMC99_RS10545 3ec4f743bdcd63bb6f1a9caa801880e2 1505 Gene3D G3DSA:3.40.50.300 1093 1204 3.2E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10545 3ec4f743bdcd63bb6f1a9caa801880e2 1505 Gene3D G3DSA:3.40.50.300 386 502 3.2E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10545 3ec4f743bdcd63bb6f1a9caa801880e2 1505 SUPERFAMILY SSF52540 1070 1130 9.81E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10545 3ec4f743bdcd63bb6f1a9caa801880e2 1505 SUPERFAMILY SSF52540 1175 1343 9.81E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10545 3ec4f743bdcd63bb6f1a9caa801880e2 1505 SUPERFAMILY SSF52540 391 522 9.81E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10545 3ec4f743bdcd63bb6f1a9caa801880e2 1505 PANTHER PTHR10887:SF340 941 1366 7.0E-50 T 20-04-2016 AMC99_RS10545 3ec4f743bdcd63bb6f1a9caa801880e2 1505 PANTHER PTHR10887:SF340 78 83 7.0E-50 T 20-04-2016 AMC99_RS10545 3ec4f743bdcd63bb6f1a9caa801880e2 1505 SUPERFAMILY SSF52980 1379 1483 4.11E-13 T 20-04-2016 IPR011335 Restriction endonuclease type II-like AMC99_RS10545 3ec4f743bdcd63bb6f1a9caa801880e2 1505 Pfam PF04480 Protein of unknown function (DUF559) 1384 1478 1.1E-6 T 20-04-2016 IPR007569 Domain of unknown function DUF559 AMC99_RS10545 3ec4f743bdcd63bb6f1a9caa801880e2 1505 PANTHER PTHR10887:SF340 390 479 7.0E-50 T 20-04-2016 AMC99_RS10545 3ec4f743bdcd63bb6f1a9caa801880e2 1505 PANTHER PTHR10887 390 479 7.0E-50 T 20-04-2016 AMC99_RS10545 3ec4f743bdcd63bb6f1a9caa801880e2 1505 Pfam PF13087 AAA domain 1177 1343 3.2E-13 T 20-04-2016 AMC99_RS12080 3936ef1c1decc6fcd47f61928b392391 95 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 19.058 T 20-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS12080 3936ef1c1decc6fcd47f61928b392391 95 PANTHER PTHR13528 1 95 1.4E-33 T 20-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 AMC99_RS12080 3936ef1c1decc6fcd47f61928b392391 95 Gene3D G3DSA:2.30.170.40 2 77 6.3E-31 T 20-04-2016 AMC99_RS12080 3936ef1c1decc6fcd47f61928b392391 95 SUPERFAMILY SSF143800 1 82 4.71E-27 T 20-04-2016 AMC99_RS12080 3936ef1c1decc6fcd47f61928b392391 95 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.3E-23 T 20-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS12080 3936ef1c1decc6fcd47f61928b392391 95 Pfam PF00830 Ribosomal L28 family 3 61 8.5E-25 T 20-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 AMC99_RS01245 745d2c5540d81f60974d553f3954b7f9 403 PIRSF PIRSF019422 1 403 8.8E-104 T 20-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A AMC99_RS01245 745d2c5540d81f60974d553f3954b7f9 403 SMART SM00925 139 302 1.5E-69 T 20-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 AMC99_RS01245 745d2c5540d81f60974d553f3954b7f9 403 Gene3D G3DSA:2.40.40.10 209 396 1.6E-46 T 20-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMC99_RS01245 745d2c5540d81f60974d553f3954b7f9 403 Gene3D G3DSA:2.40.40.10 70 204 3.5E-18 T 20-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMC99_RS01245 745d2c5540d81f60974d553f3954b7f9 403 Pfam PF06725 3D domain 321 390 6.7E-21 T 20-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AMC99_RS01245 745d2c5540d81f60974d553f3954b7f9 403 PANTHER PTHR30124:SF0 97 393 3.0E-67 T 20-04-2016 AMC99_RS01245 745d2c5540d81f60974d553f3954b7f9 403 PANTHER PTHR30124 97 393 3.0E-67 T 20-04-2016 AMC99_RS01245 745d2c5540d81f60974d553f3954b7f9 403 SUPERFAMILY SSF50685 64 396 1.33E-102 T 20-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMC99_RS01245 745d2c5540d81f60974d553f3954b7f9 403 Pfam PF03562 MltA specific insert domain 67 302 1.8E-61 T 20-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 AMC99_RS08585 0c4002f88a8b84b9608d1bc14e02beeb 182 Gene3D G3DSA:2.30.270.10 94 157 4.5E-17 T 20-04-2016 IPR023361 Protein of unknown function DUF1285, beta-roll domain AMC99_RS08585 0c4002f88a8b84b9608d1bc14e02beeb 182 Gene3D G3DSA:3.10.540.10 11 93 3.5E-30 T 20-04-2016 AMC99_RS08585 0c4002f88a8b84b9608d1bc14e02beeb 182 Pfam PF06938 Protein of unknown function (DUF1285) 42 177 6.4E-42 T 20-04-2016 IPR010707 Protein of unknown function DUF1285 AMC99_RS08585 0c4002f88a8b84b9608d1bc14e02beeb 182 PIRSF PIRSF029557 9 182 2.2E-43 T 20-04-2016 IPR010707 Protein of unknown function DUF1285 AMC99_RS02265 3571018c493137e4ae925547b9ca7fd3 254 PANTHER PTHR24322 13 144 2.6E-71 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02265 3571018c493137e4ae925547b9ca7fd3 254 PANTHER PTHR24322 160 192 2.6E-71 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02265 3571018c493137e4ae925547b9ca7fd3 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS02265 3571018c493137e4ae925547b9ca7fd3 254 PANTHER PTHR24322:SF650 13 144 2.6E-71 T 20-04-2016 AMC99_RS02265 3571018c493137e4ae925547b9ca7fd3 254 PANTHER PTHR24322:SF650 160 192 2.6E-71 T 20-04-2016 AMC99_RS02265 3571018c493137e4ae925547b9ca7fd3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.2E-39 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02265 3571018c493137e4ae925547b9ca7fd3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.2E-39 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02265 3571018c493137e4ae925547b9ca7fd3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.2E-39 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02265 3571018c493137e4ae925547b9ca7fd3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.2E-39 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02265 3571018c493137e4ae925547b9ca7fd3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.2E-39 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02265 3571018c493137e4ae925547b9ca7fd3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.2E-39 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02265 3571018c493137e4ae925547b9ca7fd3 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 253 3.0E-63 T 20-04-2016 AMC99_RS02265 3571018c493137e4ae925547b9ca7fd3 254 Gene3D G3DSA:3.40.50.720 2 254 1.1E-85 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02265 3571018c493137e4ae925547b9ca7fd3 254 SUPERFAMILY SSF51735 8 254 7.3E-83 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09115 af47a849fd177d184470b70283f4986c 401 PANTHER PTHR30474 9 397 3.6E-83 T 20-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AMC99_RS09115 af47a849fd177d184470b70283f4986c 401 Pfam PF01098 Cell cycle protein 35 380 8.8E-62 T 20-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AMC99_RS04675 f36c8f270ff0da83df5b268fe0c2e5e4 262 Pfam PF01513 ATP-NAD kinase 37 221 2.9E-20 T 20-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMC99_RS04675 f36c8f270ff0da83df5b268fe0c2e5e4 262 Hamap MF_00361 NAD kinase [nadK]. 8 262 20.241 T 20-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMC99_RS04675 f36c8f270ff0da83df5b268fe0c2e5e4 262 PANTHER PTHR20275 6 262 1.9E-85 T 20-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMC99_RS04675 f36c8f270ff0da83df5b268fe0c2e5e4 262 Gene3D G3DSA:3.40.50.10330 26 117 2.2E-14 T 20-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMC99_RS04675 f36c8f270ff0da83df5b268fe0c2e5e4 262 SUPERFAMILY SSF111331 29 247 8.9E-54 T 20-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain AMC99_RS04675 f36c8f270ff0da83df5b268fe0c2e5e4 262 Gene3D G3DSA:2.60.200.30 118 231 5.0E-31 T 20-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMC99_RS04675 f36c8f270ff0da83df5b268fe0c2e5e4 262 PANTHER PTHR20275:SF7 6 262 1.9E-85 T 20-04-2016 AMC99_RS12650 12bd9ef2449691f15b438ca30422c0f4 157 Pfam PF02600 Disulfide bond formation protein DsbB 13 149 1.3E-28 T 20-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AMC99_RS12650 12bd9ef2449691f15b438ca30422c0f4 157 PIRSF PIRSF033913 4 157 2.1E-21 T 20-04-2016 IPR024199 Uncharacterised conserved protein, DsbB-like AMC99_RS12650 12bd9ef2449691f15b438ca30422c0f4 157 Gene3D G3DSA:1.20.1550.10 15 155 7.1E-16 T 20-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain AMC99_RS12650 12bd9ef2449691f15b438ca30422c0f4 157 SUPERFAMILY SSF158442 13 150 1.7E-31 T 20-04-2016 AMC99_RS10575 001fef6ba18f141bb0b5edd61f5351d2 255 SUPERFAMILY SSF52833 8 81 2.8E-13 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS10575 001fef6ba18f141bb0b5edd61f5351d2 255 Gene3D G3DSA:3.40.30.10 10 80 1.9E-16 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS10575 001fef6ba18f141bb0b5edd61f5351d2 255 Pfam PF00462 Glutaredoxin 11 70 5.8E-7 T 20-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMC99_RS07580 dcadedd628fcb7c7379c725c0338ba92 194 SUPERFAMILY SSF55729 13 160 3.01E-17 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS07580 dcadedd628fcb7c7379c725c0338ba92 194 Pfam PF00583 Acetyltransferase (GNAT) family 84 153 8.6E-5 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS07580 dcadedd628fcb7c7379c725c0338ba92 194 Gene3D G3DSA:3.40.630.30 16 165 1.9E-16 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS13140 ad05292984dac03ff0dab45fc27bf0c3 67 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 20-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS13140 ad05292984dac03ff0dab45fc27bf0c3 67 PRINTS PR00064 Ribosomal protein L35 signature 21 35 3.8E-9 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMC99_RS13140 ad05292984dac03ff0dab45fc27bf0c3 67 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.8E-9 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMC99_RS13140 ad05292984dac03ff0dab45fc27bf0c3 67 PRINTS PR00064 Ribosomal protein L35 signature 36 54 3.8E-9 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMC99_RS13140 ad05292984dac03ff0dab45fc27bf0c3 67 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 2.5E-18 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMC99_RS13140 ad05292984dac03ff0dab45fc27bf0c3 67 PANTHER PTHR33343 1 66 8.1E-16 T 20-04-2016 AMC99_RS13140 ad05292984dac03ff0dab45fc27bf0c3 67 SUPERFAMILY SSF143034 2 64 7.06E-21 T 20-04-2016 AMC99_RS13140 ad05292984dac03ff0dab45fc27bf0c3 67 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 15.637 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMC99_RS13140 ad05292984dac03ff0dab45fc27bf0c3 67 Pfam PF01632 Ribosomal protein L35 2 60 1.7E-20 T 20-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 SMART SM01008 242 320 6.0E-5 T 20-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 SUPERFAMILY SSF56003 8 100 1.06E-28 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 SUPERFAMILY SSF56003 137 266 1.06E-28 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 PIRSF PIRSF036389 1 758 5.0E-154 T 20-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 PANTHER PTHR11908:SF2 176 497 8.6E-69 T 20-04-2016 AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 PANTHER PTHR11908:SF2 515 749 8.6E-69 T 20-04-2016 AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 SUPERFAMILY SSF54665 243 317 2.88E-6 T 20-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 Gene3D G3DSA:3.30.365.10 137 211 5.9E-34 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 Gene3D G3DSA:3.30.365.10 44 100 5.9E-34 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 641 708 3.3E-9 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 44 92 3.1E-6 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 358 583 2.5E-24 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 SUPERFAMILY SSF56003 357 754 2.91E-83 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 PANTHER PTHR11908 176 497 8.6E-69 T 20-04-2016 AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 PANTHER PTHR11908 515 749 8.6E-69 T 20-04-2016 AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 Gene3D G3DSA:3.30.365.10 417 573 7.0E-21 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 Gene3D G3DSA:3.90.1170.50 231 295 2.7E-7 T 20-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMC99_RS10915 d02f9d46b8a7d9adef6dbabe03540d72 759 Gene3D G3DSA:3.30.365.10 574 753 2.5E-28 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMC99_RS02420 6f0c1d2e9f724f346602f554dd0c1eb3 541 SUPERFAMILY SSF49899 357 536 2.18E-21 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMC99_RS02420 6f0c1d2e9f724f346602f554dd0c1eb3 541 PANTHER PTHR22925 44 536 8.2E-185 T 20-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMC99_RS02420 6f0c1d2e9f724f346602f554dd0c1eb3 541 Gene3D G3DSA:2.115.10.20 60 338 1.6E-67 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AMC99_RS02420 6f0c1d2e9f724f346602f554dd0c1eb3 541 Gene3D G3DSA:2.60.120.200 358 537 6.8E-9 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMC99_RS02420 6f0c1d2e9f724f346602f554dd0c1eb3 541 SUPERFAMILY SSF75005 61 338 1.23E-69 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AMC99_RS02420 6f0c1d2e9f724f346602f554dd0c1eb3 541 PANTHER PTHR22925:SF33 44 536 8.2E-185 T 20-04-2016 AMC99_RS02420 6f0c1d2e9f724f346602f554dd0c1eb3 541 Pfam PF04616 Glycosyl hydrolases family 43 62 332 2.5E-78 T 20-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMC99_RS00950 74d5426620da389de6a62457a6646a5e 378 Pfam PF02687 FtsX-like permease family 262 373 2.7E-15 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMC99_RS00950 74d5426620da389de6a62457a6646a5e 378 PANTHER PTHR30489 1 378 3.5E-25 T 20-04-2016 AMC99_RS13740 b6b9022253ea8f240705dbb6521ad74d 78 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 6 76 1.1E-35 T 20-04-2016 IPR018753 Azospirillum phage Cd, Gp10 AMC99_RS13740 b6b9022253ea8f240705dbb6521ad74d 78 Gene3D G3DSA:1.10.287.40 5 57 3.0E-4 T 20-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 AMC99_RS05570 e9907cc861bf360a5c8e8335bc7a5e3b 383 Gene3D G3DSA:3.80.30.20 5 236 1.2E-27 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMC99_RS05570 e9907cc861bf360a5c8e8335bc7a5e3b 383 Pfam PF04055 Radical SAM superfamily 7 174 3.1E-21 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_RS05570 e9907cc861bf360a5c8e8335bc7a5e3b 383 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 4 342 1.7E-90 T 20-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- AMC99_RS05570 e9907cc861bf360a5c8e8335bc7a5e3b 383 SUPERFAMILY SSF102114 3 372 6.02E-102 T 20-04-2016 AMC99_RS05570 e9907cc861bf360a5c8e8335bc7a5e3b 383 Pfam PF06969 HemN C-terminal domain 303 365 3.4E-8 T 20-04-2016 IPR010723 HemN, C-terminal AMC99_RS05570 e9907cc861bf360a5c8e8335bc7a5e3b 383 PANTHER PTHR13932 3 372 2.5E-130 T 20-04-2016 AMC99_RS05570 e9907cc861bf360a5c8e8335bc7a5e3b 383 SMART SM00729 2 221 4.0E-51 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMC99_RS09670 f540582ed4a113e287bae67873987809 145 Gene3D G3DSA:3.10.180.10 3 131 4.0E-32 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS09670 f540582ed4a113e287bae67873987809 145 SUPERFAMILY SSF54593 3 129 3.85E-27 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS09670 f540582ed4a113e287bae67873987809 145 PANTHER PTHR10374 3 134 1.9E-33 T 20-04-2016 AMC99_RS09670 f540582ed4a113e287bae67873987809 145 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 124 8.0E-11 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_RS09670 f540582ed4a113e287bae67873987809 145 PANTHER PTHR10374:SF8 3 134 1.9E-33 T 20-04-2016 AMC99_RS03360 d3ef4f218e0a7b4ab0634b30d2b6ed1a 245 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 200 226 - T 20-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 AMC99_RS03360 d3ef4f218e0a7b4ab0634b30d2b6ed1a 245 PANTHER PTHR13773:SF0 18 238 1.3E-40 T 20-04-2016 AMC99_RS03360 d3ef4f218e0a7b4ab0634b30d2b6ed1a 245 Pfam PF01148 Cytidylyltransferase family 72 238 2.7E-43 T 20-04-2016 AMC99_RS03360 d3ef4f218e0a7b4ab0634b30d2b6ed1a 245 PANTHER PTHR13773 18 238 1.3E-40 T 20-04-2016 AMC99_RS11205 af0b827c5bcdb176eecbe3dc7f52237a 86 Gene3D G3DSA:2.60.260.40 2 62 2.5E-21 T 20-04-2016 IPR019401 Zinc finger, CHCC-type AMC99_RS11205 af0b827c5bcdb176eecbe3dc7f52237a 86 Pfam PF10276 Zinc-finger domain 13 59 4.6E-19 T 20-04-2016 IPR019401 Zinc finger, CHCC-type AMC99_RS08205 f34a8b64b197962cd75f943be451d472 182 PIRSF PIRSF008502 1 182 1.9E-36 T 20-04-2016 IPR012545 Protein of unknown function DUF1697 AMC99_RS08205 f34a8b64b197962cd75f943be451d472 182 Gene3D G3DSA:3.30.70.1280 1 86 3.7E-22 T 20-04-2016 AMC99_RS08205 f34a8b64b197962cd75f943be451d472 182 Pfam PF08002 Protein of unknown function (DUF1697) 1 140 4.9E-33 T 20-04-2016 IPR012545 Protein of unknown function DUF1697 AMC99_RS08205 f34a8b64b197962cd75f943be451d472 182 PANTHER PTHR36439 1 180 2.6E-26 T 20-04-2016 AMC99_RS08205 f34a8b64b197962cd75f943be451d472 182 PANTHER PTHR36439:SF1 1 180 2.6E-26 T 20-04-2016 AMC99_RS08205 f34a8b64b197962cd75f943be451d472 182 SUPERFAMILY SSF160379 1 179 6.67E-41 T 20-04-2016 AMC99_RS07330 ba2b94f8a8fdf8c61c8c57efb9fea67e 375 PANTHER PTHR21666 149 278 7.4E-15 T 20-04-2016 AMC99_RS07330 ba2b94f8a8fdf8c61c8c57efb9fea67e 375 Pfam PF07486 Cell Wall Hydrolase 167 275 2.3E-26 T 20-04-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 AMC99_RS07330 ba2b94f8a8fdf8c61c8c57efb9fea67e 375 PANTHER PTHR21666:SF178 149 278 7.4E-15 T 20-04-2016 AMC99_RS00980 2814ff129a1d3eb626c3566bea90ba43 242 SUPERFAMILY SSF52540 2 238 4.07E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00980 2814ff129a1d3eb626c3566bea90ba43 242 PANTHER PTHR13696 1 242 9.5E-39 T 20-04-2016 AMC99_RS00980 2814ff129a1d3eb626c3566bea90ba43 242 Gene3D G3DSA:3.40.50.300 2 240 1.5E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00980 2814ff129a1d3eb626c3566bea90ba43 242 Pfam PF13614 AAA domain 2 168 7.7E-29 T 20-04-2016 IPR025669 AAA domain AMC99_RS12030 9b9b394aa1beb1a5b3f46a74bd9db64d 451 Gene3D G3DSA:3.30.2010.10 26 108 5.6E-18 T 20-04-2016 AMC99_RS12030 9b9b394aa1beb1a5b3f46a74bd9db64d 451 Pfam PF01435 Peptidase family M48 33 223 2.2E-30 T 20-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMC99_RS12030 9b9b394aa1beb1a5b3f46a74bd9db64d 451 PANTHER PTHR22726 24 313 7.0E-43 T 20-04-2016 AMC99_RS12030 9b9b394aa1beb1a5b3f46a74bd9db64d 451 SMART SM00028 376 409 190.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS12030 9b9b394aa1beb1a5b3f46a74bd9db64d 451 SMART SM00028 271 304 28.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS12030 9b9b394aa1beb1a5b3f46a74bd9db64d 451 SMART SM00028 305 338 6.2 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS12030 9b9b394aa1beb1a5b3f46a74bd9db64d 451 Gene3D G3DSA:1.25.40.10 270 414 6.9E-23 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS12030 9b9b394aa1beb1a5b3f46a74bd9db64d 451 PANTHER PTHR22726:SF10 24 313 7.0E-43 T 20-04-2016 AMC99_RS12030 9b9b394aa1beb1a5b3f46a74bd9db64d 451 SUPERFAMILY SSF48452 271 399 8.41E-19 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS12030 9b9b394aa1beb1a5b3f46a74bd9db64d 451 Pfam PF13432 Tetratricopeptide repeat 354 398 1.3E-6 T 20-04-2016 AMC99_RS12030 9b9b394aa1beb1a5b3f46a74bd9db64d 451 Pfam PF13432 Tetratricopeptide repeat 288 337 2.4E-4 T 20-04-2016 AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 175 3.5E-41 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 20-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 PANTHER PTHR30314:SF3 1 321 2.0E-171 T 20-04-2016 AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 Pfam PF12327 FtsZ family, C-terminal domain 225 320 1.8E-36 T 20-04-2016 IPR024757 Cell division protein FtsZ, C-terminal AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 SMART SM00865 210 328 2.5E-57 T 20-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 Gene3D G3DSA:3.40.50.1440 16 217 5.4E-93 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 SUPERFAMILY SSF52490 15 211 2.35E-68 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 PRINTS PR00423 Cell division protein FtsZ signature 101 121 4.1E-50 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 PRINTS PR00423 Cell division protein FtsZ signature 215 236 4.1E-50 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 PRINTS PR00423 Cell division protein FtsZ signature 129 150 4.1E-50 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 PRINTS PR00423 Cell division protein FtsZ signature 192 214 4.1E-50 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 SMART SM00864 16 208 4.5E-105 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 377 37.826 T 20-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 330 6.7E-125 T 20-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 SUPERFAMILY SSF55307 207 323 4.12E-44 T 20-04-2016 IPR008280 Tubulin/FtsZ, C-terminal AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 PANTHER PTHR30314 1 321 2.0E-171 T 20-04-2016 AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 Gene3D G3DSA:3.30.1330.20 218 322 3.2E-48 T 20-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AMC99_RS09075 2abded335a212f6633bc8d58cb74a828 577 ProSitePatterns PS01134 FtsZ protein signature 1. 47 81 - T 20-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMC99_RS12455 6b777a1dc76af662ebdfe509418e98a5 326 SUPERFAMILY SSF110849 66 157 2.88E-29 T 20-04-2016 IPR003115 ParB/Sulfiredoxin AMC99_RS12455 6b777a1dc76af662ebdfe509418e98a5 326 SMART SM00470 65 155 6.2E-34 T 20-04-2016 IPR003115 ParB/Sulfiredoxin AMC99_RS12455 6b777a1dc76af662ebdfe509418e98a5 326 PANTHER PTHR33375 61 321 4.1E-84 T 20-04-2016 AMC99_RS12455 6b777a1dc76af662ebdfe509418e98a5 326 PANTHER PTHR33375 4 39 4.1E-84 T 20-04-2016 AMC99_RS12455 6b777a1dc76af662ebdfe509418e98a5 326 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 65 232 6.5E-57 T 20-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AMC99_RS12455 6b777a1dc76af662ebdfe509418e98a5 326 Gene3D G3DSA:3.90.1530.10 62 161 5.7E-40 T 20-04-2016 AMC99_RS12455 6b777a1dc76af662ebdfe509418e98a5 326 PANTHER PTHR33375:SF3 61 321 4.1E-84 T 20-04-2016 AMC99_RS12455 6b777a1dc76af662ebdfe509418e98a5 326 PANTHER PTHR33375:SF3 4 39 4.1E-84 T 20-04-2016 AMC99_RS12455 6b777a1dc76af662ebdfe509418e98a5 326 SUPERFAMILY SSF109709 147 252 4.97E-34 T 20-04-2016 AMC99_RS12455 6b777a1dc76af662ebdfe509418e98a5 326 Pfam PF02195 ParB-like nuclease domain 66 155 1.6E-26 T 20-04-2016 IPR003115 ParB/Sulfiredoxin AMC99_RS05795 1fa431dbec7c068091b8b68a090b93cb 338 Gene3D G3DSA:3.20.20.70 20 256 1.6E-83 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS05795 1fa431dbec7c068091b8b68a090b93cb 338 PIRSF PIRSF006621 12 337 4.4E-110 T 20-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMC99_RS05795 1fa431dbec7c068091b8b68a090b93cb 338 PANTHER PTHR11082:SF25 10 338 1.0E-136 T 20-04-2016 AMC99_RS05795 1fa431dbec7c068091b8b68a090b93cb 338 Gene3D G3DSA:1.10.1200.80 266 330 1.8E-19 T 20-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AMC99_RS05795 1fa431dbec7c068091b8b68a090b93cb 338 PANTHER PTHR11082 10 338 1.0E-136 T 20-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMC99_RS05795 1fa431dbec7c068091b8b68a090b93cb 338 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 15 330 8.1E-120 T 20-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AMC99_RS05795 1fa431dbec7c068091b8b68a090b93cb 338 Pfam PF01207 Dihydrouridine synthase (Dus) 25 326 2.9E-107 T 20-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMC99_RS05795 1fa431dbec7c068091b8b68a090b93cb 338 SUPERFAMILY SSF51395 23 330 3.66E-94 T 20-04-2016 AMC99_RS05795 1fa431dbec7c068091b8b68a090b93cb 338 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 106 124 - T 20-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMC99_RS04975 7d3e1e1a5811a39e3fdfe65b38e634b0 461 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 163 456 4.5E-82 T 20-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AMC99_RS04975 7d3e1e1a5811a39e3fdfe65b38e634b0 461 PANTHER PTHR30425:SF3 156 461 2.4E-91 T 20-04-2016 AMC99_RS04975 7d3e1e1a5811a39e3fdfe65b38e634b0 461 Pfam PF12501 Phosphate ATP-binding cassette transporter 11 178 8.5E-24 T 20-04-2016 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 AMC99_RS04975 7d3e1e1a5811a39e3fdfe65b38e634b0 461 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 246 457 1.9E-14 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMC99_RS04975 7d3e1e1a5811a39e3fdfe65b38e634b0 461 PANTHER PTHR30425 156 461 2.4E-91 T 20-04-2016 AMC99_RS04975 7d3e1e1a5811a39e3fdfe65b38e634b0 461 SUPERFAMILY SSF161098 224 448 1.11E-29 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMC99_RS04975 7d3e1e1a5811a39e3fdfe65b38e634b0 461 Gene3D G3DSA:1.10.3720.10 226 459 3.6E-37 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMC99_RS10815 16a92d19c998d931df69c52d324aa84c 313 SUPERFAMILY SSF51197 4 309 4.05E-83 T 20-04-2016 AMC99_RS10815 16a92d19c998d931df69c52d324aa84c 313 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 168 271 2.0E-15 T 20-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMC99_RS10815 16a92d19c998d931df69c52d324aa84c 313 PANTHER PTHR10209:SF146 1 310 5.9E-87 T 20-04-2016 AMC99_RS10815 16a92d19c998d931df69c52d324aa84c 313 Gene3D G3DSA:2.60.120.330 4 309 6.4E-87 T 20-04-2016 IPR027443 Isopenicillin N synthase-like AMC99_RS10815 16a92d19c998d931df69c52d324aa84c 313 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 17 122 1.6E-26 T 20-04-2016 IPR026992 Non-haem dioxygenase N-terminal domain AMC99_RS10815 16a92d19c998d931df69c52d324aa84c 313 PANTHER PTHR10209 1 310 5.9E-87 T 20-04-2016 AMC99_RS11970 fa8f3941808a7cee804e3978f0a9d975 343 SMART SM00558 121 281 9.0E-4 T 20-04-2016 IPR003347 JmjC domain AMC99_RS11970 fa8f3941808a7cee804e3978f0a9d975 343 PANTHER PTHR12461 12 320 1.2E-86 T 20-04-2016 AMC99_RS11970 fa8f3941808a7cee804e3978f0a9d975 343 SUPERFAMILY SSF51197 34 307 8.65E-49 T 20-04-2016 AMC99_RS11970 fa8f3941808a7cee804e3978f0a9d975 343 Pfam PF13621 Cupin-like domain 31 265 2.6E-51 T 20-04-2016 AMC99_RS11970 fa8f3941808a7cee804e3978f0a9d975 343 Gene3D G3DSA:2.60.120.650 33 264 6.3E-37 T 20-04-2016 AMC99_RS11970 fa8f3941808a7cee804e3978f0a9d975 343 PANTHER PTHR12461:SF39 12 320 1.2E-86 T 20-04-2016 AMC99_RS01755 e7ad48de3f298c243464248f180c94de 553 Gene3D G3DSA:1.20.210.10 79 549 1.3E-72 T 20-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS01755 e7ad48de3f298c243464248f180c94de 553 PANTHER PTHR10422 51 523 6.6E-256 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS01755 e7ad48de3f298c243464248f180c94de 553 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 266 321 - T 20-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS01755 e7ad48de3f298c243464248f180c94de 553 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 77 506 8.8E-115 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS01755 e7ad48de3f298c243464248f180c94de 553 PANTHER PTHR10422:SF21 51 523 6.6E-256 T 20-04-2016 AMC99_RS01755 e7ad48de3f298c243464248f180c94de 553 SUPERFAMILY SSF81442 71 548 1.57E-123 T 20-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS01755 e7ad48de3f298c243464248f180c94de 553 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 71 528 7.9E-227 T 20-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMC99_RS07595 bb17b6f921d5cea4a6a8d35534c5d20f 350 Pfam PF07486 Cell Wall Hydrolase 128 236 2.1E-25 T 20-04-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 AMC99_RS07595 bb17b6f921d5cea4a6a8d35534c5d20f 350 PANTHER PTHR21666:SF178 116 237 6.0E-13 T 20-04-2016 AMC99_RS07595 bb17b6f921d5cea4a6a8d35534c5d20f 350 PANTHER PTHR21666 116 237 6.0E-13 T 20-04-2016 AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 433 8.6E-173 T 20-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 PANTHER PTHR11262 209 433 1.6E-193 T 20-04-2016 AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 PANTHER PTHR11262 3 106 1.6E-193 T 20-04-2016 AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 Gene3D G3DSA:1.10.8.10 112 167 1.6E-18 T 20-04-2016 AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 Gene3D G3DSA:1.10.8.10 204 234 1.6E-18 T 20-04-2016 AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 PANTHER PTHR11262:SF3 209 433 1.6E-193 T 20-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 PANTHER PTHR11262:SF3 3 106 1.6E-193 T 20-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 325 394 1.4E-6 T 20-04-2016 IPR019489 Clp ATPase, C-terminal AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 SMART SM00382 50 326 8.3E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 Gene3D G3DSA:3.40.50.300 236 321 6.1E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 Gene3D G3DSA:3.40.50.300 4 111 6.1E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 SMART SM01086 325 421 1.2E-19 T 20-04-2016 IPR019489 Clp ATPase, C-terminal AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 Gene3D G3DSA:1.10.8.60 324 433 1.1E-33 T 20-04-2016 AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 Pfam PF13401 AAA domain 52 143 1.5E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 SUPERFAMILY SSF52540 3 425 3.41E-80 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10385 55537dd3c0f26eb12083174e4d60cee1 433 Pfam PF07724 AAA domain (Cdc48 subfamily) 195 319 1.1E-33 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_RS08000 832c415447d85df051994366472291fa 213 Gene3D G3DSA:3.60.15.10 4 209 7.9E-58 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS08000 832c415447d85df051994366472291fa 213 SMART SM00849 12 191 1.5E-34 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS08000 832c415447d85df051994366472291fa 213 Pfam PF00753 Metallo-beta-lactamase superfamily 9 191 1.9E-29 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS08000 832c415447d85df051994366472291fa 213 PANTHER PTHR11935 1 210 1.8E-105 T 20-04-2016 AMC99_RS08000 832c415447d85df051994366472291fa 213 SUPERFAMILY SSF56281 5 207 3.28E-55 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS08000 832c415447d85df051994366472291fa 213 PANTHER PTHR11935:SF115 1 210 1.8E-105 T 20-04-2016 AMC99_RS12810 3f2606a5c8bc7e1812675b0a8eeb12b2 379 Gene3D G3DSA:3.40.710.10 50 368 2.6E-48 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS12810 3f2606a5c8bc7e1812675b0a8eeb12b2 379 PANTHER PTHR22935 8 374 1.3E-37 T 20-04-2016 AMC99_RS12810 3f2606a5c8bc7e1812675b0a8eeb12b2 379 PANTHER PTHR22935:SF77 8 374 1.3E-37 T 20-04-2016 AMC99_RS12810 3f2606a5c8bc7e1812675b0a8eeb12b2 379 Pfam PF00144 Beta-lactamase 68 360 9.4E-35 T 20-04-2016 IPR001466 Beta-lactamase-related AMC99_RS12810 3f2606a5c8bc7e1812675b0a8eeb12b2 379 SUPERFAMILY SSF56601 2 373 1.2E-71 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS03390 55f31ecb7b93763c56c43d88f55a9890 74 PRINTS PR01249 Ribosomal protein L31 signature 49 67 3.5E-9 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03390 55f31ecb7b93763c56c43d88f55a9890 74 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.5E-9 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03390 55f31ecb7b93763c56c43d88f55a9890 74 PRINTS PR01249 Ribosomal protein L31 signature 34 49 3.5E-9 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03390 55f31ecb7b93763c56c43d88f55a9890 74 ProSitePatterns PS01143 Ribosomal protein L31 signature. 38 59 - T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03390 55f31ecb7b93763c56c43d88f55a9890 74 PANTHER PTHR33280 1 70 3.6E-21 T 20-04-2016 AMC99_RS03390 55f31ecb7b93763c56c43d88f55a9890 74 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 69 5.1E-30 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03390 55f31ecb7b93763c56c43d88f55a9890 74 SUPERFAMILY SSF143800 1 70 7.85E-21 T 20-04-2016 AMC99_RS03390 55f31ecb7b93763c56c43d88f55a9890 74 Pfam PF01197 Ribosomal protein L31 1 68 2.4E-23 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS01365 2dba0be8f1293ebee4a10374c71f9988 381 Pfam PF04551 GcpE protein 16 357 1.1E-131 T 20-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 AMC99_RS01365 2dba0be8f1293ebee4a10374c71f9988 381 PIRSF PIRSF004640 4 366 2.7E-146 T 20-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 AMC99_RS01365 2dba0be8f1293ebee4a10374c71f9988 381 SUPERFAMILY SSF51395 25 121 2.31E-9 T 20-04-2016 AMC99_RS01365 2dba0be8f1293ebee4a10374c71f9988 381 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 12 357 2.3E-137 T 20-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 AMC99_RS01365 2dba0be8f1293ebee4a10374c71f9988 381 Gene3D G3DSA:3.20.20.70 7 79 1.2E-4 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS01365 2dba0be8f1293ebee4a10374c71f9988 381 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 10 361 33.422 T 20-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 AMC99_RS01365 2dba0be8f1293ebee4a10374c71f9988 381 Gene3D G3DSA:3.20.20.120 80 145 3.3E-4 T 20-04-2016 IPR029065 Enolase C-terminal domain-like AMC99_RS01365 2dba0be8f1293ebee4a10374c71f9988 381 SUPERFAMILY SSF56014 270 354 8.97E-15 T 20-04-2016 AMC99_RS01365 2dba0be8f1293ebee4a10374c71f9988 381 PANTHER PTHR30454 6 369 2.1E-177 T 20-04-2016 AMC99_RS00935 91fb27482e027e35bd8f559024bd924a 467 SUPERFAMILY SSF56954 3 458 1.22E-73 T 20-04-2016 AMC99_RS00935 91fb27482e027e35bd8f559024bd924a 467 PANTHER PTHR30203:SF3 48 457 8.0E-60 T 20-04-2016 AMC99_RS00935 91fb27482e027e35bd8f559024bd924a 467 Pfam PF02321 Outer membrane efflux protein 271 451 1.1E-18 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMC99_RS00935 91fb27482e027e35bd8f559024bd924a 467 Pfam PF02321 Outer membrane efflux protein 58 231 2.5E-16 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMC99_RS00935 91fb27482e027e35bd8f559024bd924a 467 PANTHER PTHR30203 48 457 8.0E-60 T 20-04-2016 AMC99_RS00935 91fb27482e027e35bd8f559024bd924a 467 Gene3D G3DSA:1.20.1600.10 48 457 4.6E-73 T 20-04-2016 AMC99_RS00935 91fb27482e027e35bd8f559024bd924a 467 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 46 457 5.8E-72 T 20-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AMC99_RS01800 d8a8a8a71b26a6bc9354c7964a252436 207 Gene3D G3DSA:3.40.50.1360 3 201 4.3E-35 T 20-04-2016 AMC99_RS01800 d8a8a8a71b26a6bc9354c7964a252436 207 SUPERFAMILY SSF100950 10 197 1.67E-36 T 20-04-2016 AMC99_RS01800 d8a8a8a71b26a6bc9354c7964a252436 207 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 98 196 2.1E-20 T 20-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AMC99_RS01800 d8a8a8a71b26a6bc9354c7964a252436 207 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 14 87 6.7E-12 T 20-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AMC99_RS01800 d8a8a8a71b26a6bc9354c7964a252436 207 PANTHER PTHR11054 13 196 5.0E-17 T 20-04-2016 AMC99_RS00880 e79f62cd487c8d51276da9d6730ef087 310 PANTHER PTHR22916:SF9 174 235 1.1E-45 T 20-04-2016 AMC99_RS00880 e79f62cd487c8d51276da9d6730ef087 310 Gene3D G3DSA:3.90.550.10 11 244 1.6E-44 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS00880 e79f62cd487c8d51276da9d6730ef087 310 PANTHER PTHR22916 174 235 1.1E-45 T 20-04-2016 AMC99_RS00880 e79f62cd487c8d51276da9d6730ef087 310 SUPERFAMILY SSF53448 7 275 2.57E-48 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS00880 e79f62cd487c8d51276da9d6730ef087 310 Pfam PF00535 Glycosyl transferase family 2 12 134 6.1E-19 T 20-04-2016 IPR001173 Glycosyltransferase 2-like AMC99_RS00880 e79f62cd487c8d51276da9d6730ef087 310 PANTHER PTHR22916:SF9 8 148 1.1E-45 T 20-04-2016 AMC99_RS00880 e79f62cd487c8d51276da9d6730ef087 310 PANTHER PTHR22916 8 148 1.1E-45 T 20-04-2016 AMC99_RS01605 c9719a94e2f2e5fac5476cba1807442e 258 SUPERFAMILY SSF54637 109 255 2.04E-16 T 20-04-2016 IPR029069 HotDog domain AMC99_RS01605 c9719a94e2f2e5fac5476cba1807442e 258 Gene3D G3DSA:3.10.129.10 138 254 2.4E-6 T 20-04-2016 IPR029069 HotDog domain AMC99_RS01605 c9719a94e2f2e5fac5476cba1807442e 258 SUPERFAMILY SSF54637 21 108 3.53E-12 T 20-04-2016 IPR029069 HotDog domain AMC99_RS01605 c9719a94e2f2e5fac5476cba1807442e 258 Gene3D G3DSA:3.10.129.10 22 108 1.3E-7 T 20-04-2016 IPR029069 HotDog domain AMC99_RS01605 c9719a94e2f2e5fac5476cba1807442e 258 Pfam PF13622 Thioesterase-like superfamily 23 255 2.8E-37 T 20-04-2016 AMC99_RS04380 5003a69e53332d19b5e8f037c5ea8670 202 PANTHER PTHR30309:SF0 1 202 8.1E-62 T 20-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMC99_RS04380 5003a69e53332d19b5e8f037c5ea8670 202 PANTHER PTHR30309 1 202 8.1E-62 T 20-04-2016 AMC99_RS04380 5003a69e53332d19b5e8f037c5ea8670 202 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 6 200 1.9E-49 T 20-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMC99_RS04380 5003a69e53332d19b5e8f037c5ea8670 202 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 199 19.515 T 20-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMC99_RS04380 5003a69e53332d19b5e8f037c5ea8670 202 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 190 8.5E-47 T 20-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMC99_RS04380 5003a69e53332d19b5e8f037c5ea8670 202 SMART SM01207 8 191 7.5E-77 T 20-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMC99_RS03560 f7edae87fb11ada3fb146d368eaf9a07 343 PANTHER PTHR37489:SF2 115 341 8.0E-52 T 20-04-2016 AMC99_RS03560 f7edae87fb11ada3fb146d368eaf9a07 343 PANTHER PTHR37489:SF2 7 96 8.0E-52 T 20-04-2016 AMC99_RS03560 f7edae87fb11ada3fb146d368eaf9a07 343 PANTHER PTHR37489 7 96 8.0E-52 T 20-04-2016 AMC99_RS03560 f7edae87fb11ada3fb146d368eaf9a07 343 PANTHER PTHR37489 115 341 8.0E-52 T 20-04-2016 AMC99_RS03560 f7edae87fb11ada3fb146d368eaf9a07 343 Pfam PF12006 Protein of unknown function (DUF3500) 3 329 6.6E-75 T 20-04-2016 IPR021889 Protein of unknown function DUF3500 AMC99_RS05605 bc145b6570c30eaf1796b32c96e1510c 162 Pfam PF00583 Acetyltransferase (GNAT) family 56 139 2.5E-15 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS05605 bc145b6570c30eaf1796b32c96e1510c 162 PANTHER PTHR23091 1 145 1.4E-19 T 20-04-2016 AMC99_RS05605 bc145b6570c30eaf1796b32c96e1510c 162 SUPERFAMILY SSF55729 1 148 8.06E-29 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS05605 bc145b6570c30eaf1796b32c96e1510c 162 Gene3D G3DSA:3.40.630.30 1 158 3.0E-28 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS11950 658185289ba7d727ac708ea989849e9d 795 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 422 623 1.4E-28 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AMC99_RS11950 658185289ba7d727ac708ea989849e9d 795 SUPERFAMILY SSF52279 422 623 1.09E-38 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AMC99_RS11950 658185289ba7d727ac708ea989849e9d 795 PRINTS PR00133 Glycosyl hydrolase family 3 signature 120 136 9.8E-24 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_RS11950 658185289ba7d727ac708ea989849e9d 795 PRINTS PR00133 Glycosyl hydrolase family 3 signature 231 247 9.8E-24 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_RS11950 658185289ba7d727ac708ea989849e9d 795 PRINTS PR00133 Glycosyl hydrolase family 3 signature 301 319 9.8E-24 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_RS11950 658185289ba7d727ac708ea989849e9d 795 PRINTS PR00133 Glycosyl hydrolase family 3 signature 144 163 9.8E-24 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_RS11950 658185289ba7d727ac708ea989849e9d 795 PRINTS PR00133 Glycosyl hydrolase family 3 signature 190 206 9.8E-24 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_RS11950 658185289ba7d727ac708ea989849e9d 795 PANTHER PTHR30620 5 68 1.6E-177 T 20-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 AMC99_RS11950 658185289ba7d727ac708ea989849e9d 795 PANTHER PTHR30620 89 601 1.6E-177 T 20-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 AMC99_RS11950 658185289ba7d727ac708ea989849e9d 795 Gene3D G3DSA:3.20.20.300 37 390 5.3E-108 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_RS11950 658185289ba7d727ac708ea989849e9d 795 SUPERFAMILY SSF51445 38 420 5.79E-109 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily AMC99_RS11950 658185289ba7d727ac708ea989849e9d 795 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 54 378 3.2E-85 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_RS11950 658185289ba7d727ac708ea989849e9d 795 Gene3D G3DSA:3.40.50.1700 406 623 1.1E-48 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AMC99_RS10435 b5e530b720574ee7248a9814531173c7 202 SUPERFAMILY SSF52833 40 201 8.15E-45 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS10435 b5e530b720574ee7248a9814531173c7 202 Gene3D G3DSA:3.40.30.10 13 201 2.5E-54 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS10435 b5e530b720574ee7248a9814531173c7 202 PANTHER PTHR12151 36 201 1.7E-59 T 20-04-2016 IPR003782 Copper chaperone SCO1/SenC AMC99_RS10435 b5e530b720574ee7248a9814531173c7 202 Pfam PF02630 SCO1/SenC 38 181 6.7E-40 T 20-04-2016 IPR003782 Copper chaperone SCO1/SenC AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 163 282 8.4E-46 T 20-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 86 292 1.6E-58 T 20-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 SUPERFAMILY SSF49503 159 293 3.5E-50 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 PANTHER PTHR22888 24 292 8.2E-88 T 20-04-2016 AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 PRINTS PR01166 Cytochrome c oxidase subunit II signature 247 264 2.5E-47 T 20-04-2016 AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 PRINTS PR01166 Cytochrome c oxidase subunit II signature 227 247 2.5E-47 T 20-04-2016 AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 PRINTS PR01166 Cytochrome c oxidase subunit II signature 124 136 2.5E-47 T 20-04-2016 AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 PRINTS PR01166 Cytochrome c oxidase subunit II signature 203 224 2.5E-47 T 20-04-2016 AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 PRINTS PR01166 Cytochrome c oxidase subunit II signature 136 156 2.5E-47 T 20-04-2016 AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 PRINTS PR01166 Cytochrome c oxidase subunit II signature 159 178 2.5E-47 T 20-04-2016 AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 PRINTS PR01166 Cytochrome c oxidase subunit II signature 265 282 2.5E-47 T 20-04-2016 AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 63 150 2.6E-19 T 20-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 Gene3D G3DSA:2.60.40.420 156 300 2.2E-53 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 228 276 - T 20-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 Gene3D G3DSA:1.10.287.90 68 155 5.7E-24 T 20-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 AMC99_RS02745 3fbd125892ae5af2c40e4177c29097f2 333 SUPERFAMILY SSF81464 58 156 5.56E-25 T 20-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 AMC99_RS09415 dca33045342f80275125875de327ae50 323 PANTHER PTHR35007:SF1 80 323 4.4E-59 T 20-04-2016 AMC99_RS09415 dca33045342f80275125875de327ae50 323 PANTHER PTHR35007 80 323 4.4E-59 T 20-04-2016 AMC99_RS09415 dca33045342f80275125875de327ae50 323 Pfam PF00482 Type II secretion system (T2SS), protein F 156 280 2.4E-25 T 20-04-2016 IPR018076 Type II secretion system F domain AMC99_RS03185 5f24586fbb5369bf7d187aa1f6057997 404 PANTHER PTHR12526 61 404 1.5E-52 T 20-04-2016 AMC99_RS03185 5f24586fbb5369bf7d187aa1f6057997 404 Pfam PF13439 Glycosyltransferase Family 4 36 209 2.9E-13 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMC99_RS03185 5f24586fbb5369bf7d187aa1f6057997 404 SUPERFAMILY SSF53756 35 403 3.84E-68 T 20-04-2016 AMC99_RS03185 5f24586fbb5369bf7d187aa1f6057997 404 Gene3D G3DSA:3.40.50.2000 194 375 6.8E-33 T 20-04-2016 AMC99_RS03185 5f24586fbb5369bf7d187aa1f6057997 404 Pfam PF00534 Glycosyl transferases group 1 232 378 2.4E-30 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 AMC99_RS08195 d1071c23ad25baae429c1628b8e12303 737 SUPERFAMILY SSF52518 30 382 1.73E-54 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS08195 d1071c23ad25baae429c1628b8e12303 737 Pfam PF02780 Transketolase, C-terminal domain 608 725 1.1E-21 T 20-04-2016 IPR033248 Transketolase, C-terminal domain AMC99_RS08195 d1071c23ad25baae429c1628b8e12303 737 PANTHER PTHR11624 249 344 1.3E-60 T 20-04-2016 IPR033247 Transketolase family AMC99_RS08195 d1071c23ad25baae429c1628b8e12303 737 PANTHER PTHR11624 382 710 1.3E-60 T 20-04-2016 IPR033247 Transketolase family AMC99_RS08195 d1071c23ad25baae429c1628b8e12303 737 Gene3D G3DSA:3.40.50.970 417 586 7.7E-46 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS08195 d1071c23ad25baae429c1628b8e12303 737 Gene3D G3DSA:3.40.50.920 614 728 2.4E-27 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMC99_RS08195 d1071c23ad25baae429c1628b8e12303 737 Pfam PF00676 Dehydrogenase E1 component 45 347 2.0E-27 T 20-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 AMC99_RS08195 d1071c23ad25baae429c1628b8e12303 737 Pfam PF02779 Transketolase, pyrimidine binding domain 404 582 1.1E-25 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_RS08195 d1071c23ad25baae429c1628b8e12303 737 Gene3D G3DSA:3.40.50.970 31 416 7.6E-82 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS08195 d1071c23ad25baae429c1628b8e12303 737 SUPERFAMILY SSF52518 402 589 4.87E-46 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold AMC99_RS08195 d1071c23ad25baae429c1628b8e12303 737 PANTHER PTHR11624:SF21 249 344 1.3E-60 T 20-04-2016 AMC99_RS08195 d1071c23ad25baae429c1628b8e12303 737 PANTHER PTHR11624:SF21 382 710 1.3E-60 T 20-04-2016 AMC99_RS08195 d1071c23ad25baae429c1628b8e12303 737 SUPERFAMILY SSF52922 604 733 1.18E-28 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMC99_RS08195 d1071c23ad25baae429c1628b8e12303 737 SMART SM00861 402 583 3.9E-42 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_RS01480 eb94e5e54d22cd09f27d92b4174711cd 74 Pfam PF06906 Protein of unknown function (DUF1272) 1 56 3.5E-26 T 20-04-2016 IPR010696 Protein of unknown function DUF1272 AMC99_RS02180 ed443d684629713d671847780954ef0b 436 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 42 433 1.8E-105 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMC99_RS02180 ed443d684629713d671847780954ef0b 436 Gene3D G3DSA:3.40.640.10 29 299 4.7E-75 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS02180 ed443d684629713d671847780954ef0b 436 SUPERFAMILY SSF53383 77 435 7.79E-93 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS02180 ed443d684629713d671847780954ef0b 436 PIRSF PIRSF001434 18 436 6.3E-118 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMC99_RS02180 ed443d684629713d671847780954ef0b 436 Gene3D G3DSA:3.90.1150.10 301 436 2.5E-44 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS02180 ed443d684629713d671847780954ef0b 436 PANTHER PTHR11808:SF49 25 436 1.6E-149 T 20-04-2016 AMC99_RS02180 ed443d684629713d671847780954ef0b 436 PANTHER PTHR11808 25 436 1.6E-149 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMC99_RS02180 ed443d684629713d671847780954ef0b 436 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 243 257 - T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.7E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.7E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.7E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 Gene3D G3DSA:3.40.50.720 1 255 1.3E-78 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 SUPERFAMILY SSF51735 2 253 2.93E-74 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.2E-41 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.2E-41 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.2E-41 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.2E-41 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 5.2E-41 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 5.2E-41 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 PANTHER PTHR24322:SF542 157 188 7.4E-47 T 20-04-2016 AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 PANTHER PTHR24322:SF542 12 141 7.4E-47 T 20-04-2016 AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 PANTHER PTHR24322 157 188 7.4E-47 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 PANTHER PTHR24322 12 141 7.4E-47 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02260 c614b33f27c2903136b53609480b599a 270 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 253 1.0E-61 T 20-04-2016 AMC99_RS03240 aace603e71827b300452267d7b3fcf7b 336 PANTHER PTHR12001 9 336 4.0E-107 T 20-04-2016 IPR017446 Polyprenyl synthetase-related AMC99_RS03240 aace603e71827b300452267d7b3fcf7b 336 Pfam PF00348 Polyprenyl synthetase 46 287 8.7E-68 T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 AMC99_RS03240 aace603e71827b300452267d7b3fcf7b 336 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 93 107 - T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 AMC99_RS03240 aace603e71827b300452267d7b3fcf7b 336 PANTHER PTHR12001:SF47 9 336 4.0E-107 T 20-04-2016 AMC99_RS03240 aace603e71827b300452267d7b3fcf7b 336 Gene3D G3DSA:1.10.600.10 18 334 3.0E-97 T 20-04-2016 IPR008949 Isoprenoid synthase domain AMC99_RS03240 aace603e71827b300452267d7b3fcf7b 336 SUPERFAMILY SSF48576 14 335 1.92E-93 T 20-04-2016 IPR008949 Isoprenoid synthase domain AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 SUPERFAMILY SSF55874 16 217 3.41E-58 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 Pfam PF01751 Toprim domain 437 535 1.1E-17 T 20-04-2016 IPR006171 Toprim domain AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 SMART SM00433 45 649 1.7E-264 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR01159 DNA gyrase subunit B signature 377 391 1.4E-12 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR01159 DNA gyrase subunit B signature 329 345 1.4E-12 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR01159 DNA gyrase subunit B signature 16 26 1.4E-12 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR01159 DNA gyrase subunit B signature 605 617 1.4E-12 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR01159 DNA gyrase subunit B signature 488 497 1.4E-12 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR01159 DNA gyrase subunit B signature 391 411 1.4E-12 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 580 645 1.1E-23 T 20-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 15 648 2.1E-231 T 20-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 SUPERFAMILY SSF54211 238 408 3.98E-40 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 13 653 42.882 T 20-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 Pfam PF00204 DNA gyrase B 238 407 5.1E-41 T 20-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 Gene3D G3DSA:3.40.50.670 422 635 1.1E-78 T 20-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 SUPERFAMILY SSF56719 417 650 1.46E-76 T 20-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 SMART SM00387 41 187 3.8E-26 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 ProSitePatterns PS00177 DNA topoisomerase II signature. 440 448 - T 20-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 Gene3D G3DSA:3.30.230.10 237 411 3.3E-39 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PANTHER PTHR10169 15 635 2.7E-199 T 20-04-2016 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 Gene3D G3DSA:3.30.565.10 16 217 1.4E-74 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 80 93 6.2E-63 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 45 60 6.2E-63 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 542 554 6.2E-63 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 522 539 6.2E-63 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 287 300 6.2E-63 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 124 138 6.2E-63 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 584 600 6.2E-63 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 438 452 6.2E-63 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 504 520 6.2E-63 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 PANTHER PTHR10169:SF45 15 635 2.7E-199 T 20-04-2016 AMC99_RS05535 0b051c4dec9f8d8fb61b88f43198111c 658 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 186 8.5E-23 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS06415 e24f394c0389fcb94b7678d63094ece6 362 PANTHER PTHR11228:SF26 15 317 1.5E-82 T 20-04-2016 AMC99_RS06415 e24f394c0389fcb94b7678d63094ece6 362 SMART SM00729 68 293 2.1E-6 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMC99_RS06415 e24f394c0389fcb94b7678d63094ece6 362 Gene3D G3DSA:3.20.20.70 71 268 3.2E-7 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS06415 e24f394c0389fcb94b7678d63094ece6 362 SUPERFAMILY SSF102114 65 278 2.35E-14 T 20-04-2016 AMC99_RS06415 e24f394c0389fcb94b7678d63094ece6 362 PANTHER PTHR11228 15 317 1.5E-82 T 20-04-2016 AMC99_RS06415 e24f394c0389fcb94b7678d63094ece6 362 Pfam PF04055 Radical SAM superfamily 73 250 8.9E-12 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_RS12365 47d60a23225e4dc810f8828ed0cbe261 189 PANTHER PTHR33231 1 189 5.5E-30 T 20-04-2016 AMC99_RS12365 47d60a23225e4dc810f8828ed0cbe261 189 Gene3D G3DSA:3.30.160.100 1 98 8.1E-22 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMC99_RS12365 47d60a23225e4dc810f8828ed0cbe261 189 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 131 184 8.4E-14 T 20-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal AMC99_RS12365 47d60a23225e4dc810f8828ed0cbe261 189 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 101 1.9E-18 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMC99_RS12365 47d60a23225e4dc810f8828ed0cbe261 189 SUPERFAMILY SSF69754 2 104 2.49E-25 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMC99_RS12365 47d60a23225e4dc810f8828ed0cbe261 189 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 96 1.1E-17 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMC99_RS06890 b9b3e5a7ea269f730f58cd7a4beab9f0 123 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 115 8.1E-48 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06890 b9b3e5a7ea269f730f58cd7a4beab9f0 123 Pfam PF01245 Ribosomal protein L19 2 115 1.7E-47 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06890 b9b3e5a7ea269f730f58cd7a4beab9f0 123 PANTHER PTHR15680 2 115 1.1E-52 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06890 b9b3e5a7ea269f730f58cd7a4beab9f0 123 ProSitePatterns PS01015 Ribosomal protein L19 signature. 88 103 - T 20-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06890 b9b3e5a7ea269f730f58cd7a4beab9f0 123 PRINTS PR00061 Ribosomal protein L19 signature 90 115 1.5E-37 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06890 b9b3e5a7ea269f730f58cd7a4beab9f0 123 PRINTS PR00061 Ribosomal protein L19 signature 6 35 1.5E-37 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06890 b9b3e5a7ea269f730f58cd7a4beab9f0 123 PRINTS PR00061 Ribosomal protein L19 signature 36 65 1.5E-37 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06890 b9b3e5a7ea269f730f58cd7a4beab9f0 123 PIRSF PIRSF002191 1 123 1.4E-51 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06890 b9b3e5a7ea269f730f58cd7a4beab9f0 123 SUPERFAMILY SSF50104 1 115 6.92E-46 T 20-04-2016 IPR008991 Translation protein SH3-like domain AMC99_RS06890 b9b3e5a7ea269f730f58cd7a4beab9f0 123 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 116 31.046 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 SUPERFAMILY SSF50494 49 278 9.77E-64 T 20-04-2016 IPR009003 Peptidase S1, PA clan AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 Pfam PF13365 Trypsin-like peptidase domain 104 245 2.1E-36 T 20-04-2016 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 Gene3D G3DSA:2.30.42.10 410 496 1.0E-17 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 Gene3D G3DSA:2.30.42.10 287 382 2.0E-29 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 Pfam PF13180 PDZ domain 411 495 7.0E-10 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 Pfam PF13180 PDZ domain 284 374 8.3E-17 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 PANTHER PTHR22939 48 436 7.3E-114 T 20-04-2016 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 Gene3D G3DSA:2.40.10.10 176 286 2.6E-45 T 20-04-2016 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 Gene3D G3DSA:2.40.10.10 41 175 6.9E-33 T 20-04-2016 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 PANTHER PTHR22939:SF79 48 436 7.3E-114 T 20-04-2016 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 SUPERFAMILY SSF50156 242 366 2.89E-23 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 SUPERFAMILY SSF50156 409 496 3.42E-14 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 SMART SM00228 284 366 4.2E-13 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 SMART SM00228 409 494 1.4E-8 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 PRINTS PR00834 HtrA/DegQ protease family signature 140 160 7.1E-55 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 PRINTS PR00834 HtrA/DegQ protease family signature 113 125 7.1E-55 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 7.1E-55 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 PRINTS PR00834 HtrA/DegQ protease family signature 181 205 7.1E-55 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 PRINTS PR00834 HtrA/DegQ protease family signature 324 336 7.1E-55 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 PRINTS PR00834 HtrA/DegQ protease family signature 238 255 7.1E-55 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_RS10935 02dc9c7fb36df390c2442c87bc175958 505 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 50 496 1.3E-142 T 20-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AMC99_RS09365 003458f50c4b102f8fe86cd8c7318214 330 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 26 304 1.0E-99 T 20-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 AMC99_RS09365 003458f50c4b102f8fe86cd8c7318214 330 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 23 306 37.644 T 20-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 AMC99_RS09365 003458f50c4b102f8fe86cd8c7318214 330 PANTHER PTHR30426 22 329 8.3E-145 T 20-04-2016 AMC99_RS09365 003458f50c4b102f8fe86cd8c7318214 330 Pfam PF02401 LytB protein 27 302 3.8E-90 T 20-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 AMC99_RS10650 60da6612cb0a86316609ca682c0361b9 304 Gene3D G3DSA:3.40.630.30 84 246 8.7E-10 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS10650 60da6612cb0a86316609ca682c0361b9 304 SUPERFAMILY SSF55729 90 252 1.06E-19 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS10650 60da6612cb0a86316609ca682c0361b9 304 Pfam PF13480 Acetyltransferase (GNAT) domain 101 246 4.0E-22 T 20-04-2016 AMC99_RS13175 23564d6dc4f2baabe9eb1edd5d719105 789 Gene3D G3DSA:2.40.170.20 185 789 5.2E-93 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS13175 23564d6dc4f2baabe9eb1edd5d719105 789 PANTHER PTHR32552:SF33 494 660 6.3E-82 T 20-04-2016 AMC99_RS13175 23564d6dc4f2baabe9eb1edd5d719105 789 PANTHER PTHR32552:SF33 676 789 6.3E-82 T 20-04-2016 AMC99_RS13175 23564d6dc4f2baabe9eb1edd5d719105 789 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 172 2.5E-19 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS13175 23564d6dc4f2baabe9eb1edd5d719105 789 Pfam PF00593 TonB dependent receptor 512 787 6.1E-25 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS13175 23564d6dc4f2baabe9eb1edd5d719105 789 SUPERFAMILY SSF56935 502 789 2.05E-129 T 20-04-2016 AMC99_RS13175 23564d6dc4f2baabe9eb1edd5d719105 789 SUPERFAMILY SSF56935 41 474 2.05E-129 T 20-04-2016 AMC99_RS13175 23564d6dc4f2baabe9eb1edd5d719105 789 PANTHER PTHR32552 22 469 6.3E-82 T 20-04-2016 AMC99_RS13175 23564d6dc4f2baabe9eb1edd5d719105 789 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 772 789 - T 20-04-2016 IPR010917 TonB-dependent receptor, conserved site AMC99_RS13175 23564d6dc4f2baabe9eb1edd5d719105 789 Gene3D G3DSA:2.170.130.10 44 181 2.3E-34 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS13175 23564d6dc4f2baabe9eb1edd5d719105 789 PANTHER PTHR32552:SF33 22 469 6.3E-82 T 20-04-2016 AMC99_RS13175 23564d6dc4f2baabe9eb1edd5d719105 789 PANTHER PTHR32552 494 660 6.3E-82 T 20-04-2016 AMC99_RS13175 23564d6dc4f2baabe9eb1edd5d719105 789 PANTHER PTHR32552 676 789 6.3E-82 T 20-04-2016 AMC99_RS10235 98a5724704e0157a0a689692392b9dcb 122 PANTHER PTHR26402 2 122 3.7E-44 T 20-04-2016 AMC99_RS10235 98a5724704e0157a0a689692392b9dcb 122 SMART SM00448 2 115 8.0E-41 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS10235 98a5724704e0157a0a689692392b9dcb 122 Gene3D G3DSA:3.40.50.2300 2 122 2.3E-41 T 20-04-2016 AMC99_RS10235 98a5724704e0157a0a689692392b9dcb 122 Pfam PF00072 Response regulator receiver domain 4 115 3.5E-29 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS10235 98a5724704e0157a0a689692392b9dcb 122 SUPERFAMILY SSF52172 1 121 6.55E-42 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS03325 f11a3fefb5400e8a7c2f465acd70f8d5 271 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 214 248 3.7E-5 T 20-04-2016 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal AMC99_RS03325 f11a3fefb5400e8a7c2f465acd70f8d5 271 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 69 91 - T 20-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMC99_RS03325 f11a3fefb5400e8a7c2f465acd70f8d5 271 PANTHER PTHR15362 11 157 2.7E-30 T 20-04-2016 AMC99_RS03325 f11a3fefb5400e8a7c2f465acd70f8d5 271 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 91 8.2E-14 T 20-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMC99_RS03325 f11a3fefb5400e8a7c2f465acd70f8d5 271 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 34 198 9.3E-32 T 20-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 AMC99_RS06790 d18479dcf7cd156d85bc5fa9ce2dc448 120 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 20.077 T 20-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS06790 d18479dcf7cd156d85bc5fa9ce2dc448 120 Pfam PF01250 Ribosomal protein S6 4 92 1.5E-27 T 20-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS06790 d18479dcf7cd156d85bc5fa9ce2dc448 120 SUPERFAMILY SSF54995 1 104 8.11E-34 T 20-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS06790 d18479dcf7cd156d85bc5fa9ce2dc448 120 PANTHER PTHR21011 1 120 3.2E-27 T 20-04-2016 AMC99_RS06790 d18479dcf7cd156d85bc5fa9ce2dc448 120 TIGRFAM TIGR00166 S6: ribosomal protein bS6 2 94 2.0E-24 T 20-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS06790 d18479dcf7cd156d85bc5fa9ce2dc448 120 Gene3D G3DSA:3.30.70.60 1 104 3.5E-36 T 20-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AMC99_RS12085 c33c3e60164310e04077041f65bea4a1 330 PIRSF PIRSF031900 6 319 4.0E-23 T 20-04-2016 IPR014567 Uncharacterised conserved protein UCP031900 AMC99_RS12085 c33c3e60164310e04077041f65bea4a1 330 Pfam PF13449 Esterase-like activity of phytase 64 303 7.5E-24 T 20-04-2016 IPR027372 Phytase-like domain AMC99_RS12950 9adba2d6ffcf96ccd83eb6583cae18d1 170 PANTHER PTHR19136 2 168 3.3E-20 T 20-04-2016 AMC99_RS12950 9adba2d6ffcf96ccd83eb6583cae18d1 170 Pfam PF12804 MobA-like NTP transferase domain 5 143 4.5E-22 T 20-04-2016 IPR025877 MobA-like NTP transferase AMC99_RS12950 9adba2d6ffcf96ccd83eb6583cae18d1 170 PANTHER PTHR19136:SF81 2 168 3.3E-20 T 20-04-2016 AMC99_RS12950 9adba2d6ffcf96ccd83eb6583cae18d1 170 SUPERFAMILY SSF53448 1 168 1.81E-22 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS12950 9adba2d6ffcf96ccd83eb6583cae18d1 170 Gene3D G3DSA:3.90.550.10 3 168 8.5E-31 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 Gene3D G3DSA:1.10.189.10 358 415 2.0E-29 T 20-04-2016 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 SUPERFAMILY SSF51621 525 885 5.42E-131 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 2 885 0.0 T 20-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 PIRSF PIRSF000853 1 886 0.0 T 20-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 Gene3D G3DSA:3.30.470.20 248 357 1.6E-37 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 PANTHER PTHR22931:SF9 1 886 0.0 T 20-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 Gene3D G3DSA:3.20.20.60 546 886 9.4E-138 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 Gene3D G3DSA:3.30.1490.20 14 115 3.9E-55 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 Gene3D G3DSA:3.30.1490.20 204 247 3.9E-55 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 SUPERFAMILY SSF56059 14 395 6.0E-143 T 20-04-2016 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 PANTHER PTHR22931 1 886 0.0 T 20-04-2016 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 24 372 1.3E-61 T 20-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 Gene3D G3DSA:1.20.80.30 116 202 6.9E-35 T 20-04-2016 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 Gene3D G3DSA:3.50.30.10 416 520 7.3E-41 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 SUPERFAMILY SSF52009 401 526 6.15E-38 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 464 475 - T 20-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 Pfam PF00391 PEP-utilising enzyme, mobile domain 436 517 4.1E-28 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMC99_RS05410 58aa3f594bc557edbf0b8054789937de 886 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 532 883 5.7E-87 T 20-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMC99_RS11690 4d2abcff41b3b1bf0620e1d4456a3e43 427 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 423 3.1E-165 T 20-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS11690 4d2abcff41b3b1bf0620e1d4456a3e43 427 Gene3D G3DSA:3.65.10.10 21 229 2.3E-64 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMC99_RS11690 4d2abcff41b3b1bf0620e1d4456a3e43 427 SUPERFAMILY SSF55205 1 426 3.01E-137 T 20-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMC99_RS11690 4d2abcff41b3b1bf0620e1d4456a3e43 427 Gene3D G3DSA:3.65.10.10 230 425 1.6E-61 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMC99_RS11690 4d2abcff41b3b1bf0620e1d4456a3e43 427 PANTHER PTHR21090 1 424 4.8E-176 T 20-04-2016 AMC99_RS11690 4d2abcff41b3b1bf0620e1d4456a3e43 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 414 1.2E-97 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMC99_RS11690 4d2abcff41b3b1bf0620e1d4456a3e43 427 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 424 44.525 T 20-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS06740 c91e71f1a0b8ad062551fc893b80277b 337 Gene3D G3DSA:3.90.180.10 9 168 1.1E-33 T 20-04-2016 IPR011032 GroES-like AMC99_RS06740 c91e71f1a0b8ad062551fc893b80277b 337 SMART SM00829 11 334 4.6E-20 T 20-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_RS06740 c91e71f1a0b8ad062551fc893b80277b 337 SUPERFAMILY SSF51735 137 308 5.92E-47 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06740 c91e71f1a0b8ad062551fc893b80277b 337 PANTHER PTHR11695 16 336 2.3E-112 T 20-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMC99_RS06740 c91e71f1a0b8ad062551fc893b80277b 337 Gene3D G3DSA:3.40.50.720 169 285 8.9E-35 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06740 c91e71f1a0b8ad062551fc893b80277b 337 SUPERFAMILY SSF50129 10 166 8.99E-31 T 20-04-2016 IPR011032 GroES-like AMC99_RS06740 c91e71f1a0b8ad062551fc893b80277b 337 Pfam PF00107 Zinc-binding dehydrogenase 171 290 6.3E-28 T 20-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_RS06740 c91e71f1a0b8ad062551fc893b80277b 337 PANTHER PTHR11695:SF525 16 336 2.3E-112 T 20-04-2016 AMC99_RS06740 c91e71f1a0b8ad062551fc893b80277b 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 89 5.9E-6 T 20-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_RS10685 4479337ea58f252e10c8ac7d226db00a 84 Gene3D G3DSA:1.10.1200.10 7 82 2.6E-7 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMC99_RS10685 4479337ea58f252e10c8ac7d226db00a 84 SUPERFAMILY SSF47336 5 83 5.52E-8 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMC99_RS06070 1815db827f3d71bbe9a1082293d51745 516 PANTHER PTHR22773:SF40 1 477 2.6E-196 T 20-04-2016 AMC99_RS06070 1815db827f3d71bbe9a1082293d51745 516 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 319 338 3.2E-49 T 20-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMC99_RS06070 1815db827f3d71bbe9a1082293d51745 516 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 3.2E-49 T 20-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMC99_RS06070 1815db827f3d71bbe9a1082293d51745 516 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 3.2E-49 T 20-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMC99_RS06070 1815db827f3d71bbe9a1082293d51745 516 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 231 255 3.2E-49 T 20-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMC99_RS06070 1815db827f3d71bbe9a1082293d51745 516 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 371 397 3.2E-49 T 20-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMC99_RS06070 1815db827f3d71bbe9a1082293d51745 516 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 477 3.3E-183 T 20-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 AMC99_RS06070 1815db827f3d71bbe9a1082293d51745 516 PANTHER PTHR22773 1 477 2.6E-196 T 20-04-2016 AMC99_RS06070 1815db827f3d71bbe9a1082293d51745 516 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 66 121 3.9E-7 T 20-04-2016 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 AMC99_RS06070 1815db827f3d71bbe9a1082293d51745 516 Pfam PF00361 Proton-conducting membrane transporter 126 412 3.7E-86 T 20-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AMC99_RS03500 7fdcb76b28d29c0395b12bd43e7d03d9 197 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 20-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMC99_RS03500 7fdcb76b28d29c0395b12bd43e7d03d9 197 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 8.6E-15 T 20-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMC99_RS03500 7fdcb76b28d29c0395b12bd43e7d03d9 197 PIRSF PIRSF000847 1 197 9.2E-36 T 20-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 AMC99_RS03500 7fdcb76b28d29c0395b12bd43e7d03d9 197 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 191 6.3E-35 T 20-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 AMC99_RS03500 7fdcb76b28d29c0395b12bd43e7d03d9 197 PANTHER PTHR14269 169 190 7.9E-33 T 20-04-2016 AMC99_RS03500 7fdcb76b28d29c0395b12bd43e7d03d9 197 PANTHER PTHR14269 1 152 7.9E-33 T 20-04-2016 AMC99_RS10195 a6c17b79603747c3dc956d8b49028160 180 SMART SM00198 28 167 4.8E-24 T 20-04-2016 IPR014044 CAP domain AMC99_RS10195 a6c17b79603747c3dc956d8b49028160 180 PRINTS PR00838 Venom allergen 5 signature 49 67 1.6E-6 T 20-04-2016 IPR002413 Ves allergen AMC99_RS10195 a6c17b79603747c3dc956d8b49028160 180 PRINTS PR00838 Venom allergen 5 signature 127 146 1.6E-6 T 20-04-2016 IPR002413 Ves allergen AMC99_RS10195 a6c17b79603747c3dc956d8b49028160 180 Pfam PF00188 Cysteine-rich secretory protein family 34 159 1.6E-17 T 20-04-2016 IPR014044 CAP domain AMC99_RS10195 a6c17b79603747c3dc956d8b49028160 180 PANTHER PTHR10334 1 167 3.5E-37 T 20-04-2016 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related AMC99_RS10195 a6c17b79603747c3dc956d8b49028160 180 Gene3D G3DSA:3.40.33.10 26 167 4.1E-34 T 20-04-2016 IPR014044 CAP domain AMC99_RS10195 a6c17b79603747c3dc956d8b49028160 180 SUPERFAMILY SSF55797 26 168 6.8E-35 T 20-04-2016 IPR014044 CAP domain AMC99_RS10195 a6c17b79603747c3dc956d8b49028160 180 PRINTS PR00837 Allergen V5/Tpx-1 family signature 49 67 3.4E-11 T 20-04-2016 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related AMC99_RS10195 a6c17b79603747c3dc956d8b49028160 180 PRINTS PR00837 Allergen V5/Tpx-1 family signature 154 167 3.4E-11 T 20-04-2016 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related AMC99_RS10195 a6c17b79603747c3dc956d8b49028160 180 PRINTS PR00837 Allergen V5/Tpx-1 family signature 128 144 3.4E-11 T 20-04-2016 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related AMC99_RS10195 a6c17b79603747c3dc956d8b49028160 180 ProSitePatterns PS01009 CRISP family signature 1. 129 139 - T 20-04-2016 IPR018244 Allergen V5/Tpx-1-related, conserved site GO:0005576 AMC99_RS12940 99f7f3a32f784a16307fb639c801bd8b 232 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 229 42.624 T 20-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 AMC99_RS12940 99f7f3a32f784a16307fb639c801bd8b 232 SMART SM00855 3 186 3.0E-25 T 20-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMC99_RS12940 99f7f3a32f784a16307fb639c801bd8b 232 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 216 2.3E-98 T 20-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 AMC99_RS12940 99f7f3a32f784a16307fb639c801bd8b 232 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 130 2.8E-25 T 20-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMC99_RS12940 99f7f3a32f784a16307fb639c801bd8b 232 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 142 217 1.8E-4 T 20-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMC99_RS12940 99f7f3a32f784a16307fb639c801bd8b 232 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 20-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 AMC99_RS12940 99f7f3a32f784a16307fb639c801bd8b 232 SUPERFAMILY SSF53254 1 217 3.47E-68 T 20-04-2016 IPR029033 Histidine phosphatase superfamily AMC99_RS12940 99f7f3a32f784a16307fb639c801bd8b 232 PANTHER PTHR11931 1 217 1.5E-126 T 20-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 AMC99_RS12940 99f7f3a32f784a16307fb639c801bd8b 232 Gene3D G3DSA:3.40.50.1240 1 218 5.2E-84 T 20-04-2016 IPR029033 Histidine phosphatase superfamily AMC99_RS12380 7b2f809c18bae87c810cc5ac81557c17 285 SUPERFAMILY SSF51735 105 279 1.4E-33 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12380 7b2f809c18bae87c810cc5ac81557c17 285 SUPERFAMILY SSF53223 5 104 7.48E-31 T 20-04-2016 AMC99_RS12380 7b2f809c18bae87c810cc5ac81557c17 285 Gene3D G3DSA:3.40.50.720 110 274 4.2E-40 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12380 7b2f809c18bae87c810cc5ac81557c17 285 PANTHER PTHR21089 8 274 9.4E-68 T 20-04-2016 AMC99_RS12380 7b2f809c18bae87c810cc5ac81557c17 285 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 8 91 8.6E-29 T 20-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS12380 7b2f809c18bae87c810cc5ac81557c17 285 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 3 285 29.799 T 20-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS12380 7b2f809c18bae87c810cc5ac81557c17 285 Gene3D G3DSA:3.40.192.10 6 109 2.8E-38 T 20-04-2016 AMC99_RS12380 7b2f809c18bae87c810cc5ac81557c17 285 PANTHER PTHR21089:SF1 8 274 9.4E-68 T 20-04-2016 AMC99_RS12380 7b2f809c18bae87c810cc5ac81557c17 285 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 7 272 2.1E-61 T 20-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AMC99_RS06410 32933e13a141fad0e6192d4e2cbab1e7 179 PIRSF PIRSF006443 1 171 1.8E-53 T 20-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 AMC99_RS06410 32933e13a141fad0e6192d4e2cbab1e7 179 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 9 174 4.5E-69 T 20-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 AMC99_RS06410 32933e13a141fad0e6192d4e2cbab1e7 179 PANTHER PTHR10192 6 171 1.0E-66 T 20-04-2016 AMC99_RS06410 32933e13a141fad0e6192d4e2cbab1e7 179 SUPERFAMILY SSF53218 7 175 1.7E-41 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS06410 32933e13a141fad0e6192d4e2cbab1e7 179 PANTHER PTHR10192:SF18 6 171 1.0E-66 T 20-04-2016 AMC99_RS06410 32933e13a141fad0e6192d4e2cbab1e7 179 Gene3D G3DSA:3.40.980.10 7 169 3.9E-43 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS06410 32933e13a141fad0e6192d4e2cbab1e7 179 SMART SM00852 15 163 1.0E-23 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS06410 32933e13a141fad0e6192d4e2cbab1e7 179 Pfam PF00994 Probable molybdopterin binding domain 15 160 1.3E-27 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS06410 32933e13a141fad0e6192d4e2cbab1e7 179 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 155 1.2E-27 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS01640 de5fc1ce7f77e9cc19dbb20baa26c38f 298 Pfam PF01925 Sulfite exporter TauE/SafE 35 292 9.4E-27 T 20-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMC99_RS01150 64b9cac9aebb90cf8c2dc388e3428180 112 Gene3D G3DSA:3.90.1590.10 4 95 1.6E-13 T 20-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMC99_RS01150 64b9cac9aebb90cf8c2dc388e3428180 112 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 94 2.4E-5 T 20-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMC99_RS01150 64b9cac9aebb90cf8c2dc388e3428180 112 SUPERFAMILY SSF51316 4 100 9.63E-21 T 20-04-2016 IPR011057 Mss4-like AMC99_RS01150 64b9cac9aebb90cf8c2dc388e3428180 112 PANTHER PTHR28620:SF2 4 111 2.9E-14 T 20-04-2016 AMC99_RS01150 64b9cac9aebb90cf8c2dc388e3428180 112 PANTHER PTHR28620 4 111 2.9E-14 T 20-04-2016 AMC99_RS04580 f121b409f84bd2fdbe06acd8d2ce82fb 511 SUPERFAMILY SSF56024 21 235 1.22E-26 T 20-04-2016 AMC99_RS04580 f121b409f84bd2fdbe06acd8d2ce82fb 511 SUPERFAMILY SSF56024 264 394 2.51E-22 T 20-04-2016 AMC99_RS04580 f121b409f84bd2fdbe06acd8d2ce82fb 511 Pfam PF13091 PLD-like domain 272 397 1.6E-11 T 20-04-2016 IPR025202 Phospholipase D-like domain AMC99_RS04580 f121b409f84bd2fdbe06acd8d2ce82fb 511 PANTHER PTHR18896:SF11 144 388 2.0E-19 T 20-04-2016 AMC99_RS04580 f121b409f84bd2fdbe06acd8d2ce82fb 511 Gene3D G3DSA:3.30.870.10 270 394 4.6E-18 T 20-04-2016 AMC99_RS04580 f121b409f84bd2fdbe06acd8d2ce82fb 511 Gene3D G3DSA:3.30.870.10 25 236 2.0E-23 T 20-04-2016 AMC99_RS04580 f121b409f84bd2fdbe06acd8d2ce82fb 511 SMART SM00155 141 168 7.3 T 20-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 AMC99_RS04580 f121b409f84bd2fdbe06acd8d2ce82fb 511 SMART SM00155 355 382 3.9E-5 T 20-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 AMC99_RS04580 f121b409f84bd2fdbe06acd8d2ce82fb 511 PANTHER PTHR18896 144 388 2.0E-19 T 20-04-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 AMC99_RS13075 be80eb13dd13e22c10a0c8f10450ebec 149 PANTHER PTHR30558 11 143 6.7E-20 T 20-04-2016 AMC99_RS13075 be80eb13dd13e22c10a0c8f10450ebec 149 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 133 2.3E-19 T 20-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AMC99_RS07125 cf16b7050c30a9413e8afbe2619033a8 407 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 270 289 - T 20-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMC99_RS07125 cf16b7050c30a9413e8afbe2619033a8 407 PIRSF PIRSF000108 1 406 1.8E-221 T 20-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMC99_RS07125 cf16b7050c30a9413e8afbe2619033a8 407 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 395 1.5E-71 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMC99_RS07125 cf16b7050c30a9413e8afbe2619033a8 407 Gene3D G3DSA:3.40.718.10 2 403 4.4E-174 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMC99_RS07125 cf16b7050c30a9413e8afbe2619033a8 407 PANTHER PTHR11822 1 406 0.0 T 20-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMC99_RS07125 cf16b7050c30a9413e8afbe2619033a8 407 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 2 404 2.3E-214 T 20-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMC99_RS07125 cf16b7050c30a9413e8afbe2619033a8 407 SUPERFAMILY SSF53659 1 404 3.84E-152 T 20-04-2016 AMC99_RS07125 cf16b7050c30a9413e8afbe2619033a8 407 SMART SM01329 9 395 6.8E-126 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMC99_RS11290 3022c6bf017b4849ba40c7f2ca061894 213 SMART SM00563 43 155 7.1E-19 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMC99_RS11290 3022c6bf017b4849ba40c7f2ca061894 213 SUPERFAMILY SSF69593 16 183 7.19E-23 T 20-04-2016 AMC99_RS11290 3022c6bf017b4849ba40c7f2ca061894 213 PANTHER PTHR10434:SF9 6 171 5.0E-34 T 20-04-2016 AMC99_RS11290 3022c6bf017b4849ba40c7f2ca061894 213 Gene3D G3DSA:3.40.1130.10 48 158 1.2E-5 T 20-04-2016 AMC99_RS11290 3022c6bf017b4849ba40c7f2ca061894 213 PANTHER PTHR10434 6 171 5.0E-34 T 20-04-2016 AMC99_RS11290 3022c6bf017b4849ba40c7f2ca061894 213 Pfam PF01553 Acyltransferase 47 150 1.9E-14 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMC99_RS01660 0bd9ad047ce7eeb40e0a6b4357770402 535 Pfam PF00266 Aminotransferase class-V 187 305 6.9E-10 T 20-04-2016 IPR000192 Aminotransferase class V domain AMC99_RS01660 0bd9ad047ce7eeb40e0a6b4357770402 535 SUPERFAMILY SSF53383 65 517 4.28E-94 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS01660 0bd9ad047ce7eeb40e0a6b4357770402 535 Gene3D G3DSA:3.40.640.10 111 326 1.2E-31 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS01660 0bd9ad047ce7eeb40e0a6b4357770402 535 PANTHER PTHR11773 37 519 2.1E-176 T 20-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 AMC99_RS10735 9189b6a8f73e511fb33bc1f2cab6fef9 231 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 12 194 5.5E-59 T 20-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AMC99_RS10735 9189b6a8f73e511fb33bc1f2cab6fef9 231 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 12 182 2.8E-68 T 20-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AMC99_RS10735 9189b6a8f73e511fb33bc1f2cab6fef9 231 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 231 77.528 T 20-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AMC99_RS10735 9189b6a8f73e511fb33bc1f2cab6fef9 231 SUPERFAMILY SSF55729 9 195 2.33E-74 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS10735 9189b6a8f73e511fb33bc1f2cab6fef9 231 PANTHER PTHR30098 7 228 9.6E-68 T 20-04-2016 AMC99_RS04025 cfaa27b210e32c2b2fbf83641e6ed365 247 Gene3D G3DSA:3.60.20.10 2 211 2.0E-21 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS04025 cfaa27b210e32c2b2fbf83641e6ed365 247 SUPERFAMILY SSF56235 2 243 5.09E-40 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS04025 cfaa27b210e32c2b2fbf83641e6ed365 247 PIRSF PIRSF009120 1 247 5.4E-95 T 20-04-2016 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 AMC99_RS04025 cfaa27b210e32c2b2fbf83641e6ed365 247 Pfam PF00227 Proteasome subunit 4 187 3.6E-10 T 20-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 AMC99_RS00540 5880185b0096d84a0da6e686c9e843e7 361 PANTHER PTHR11102 131 354 3.1E-22 T 20-04-2016 AMC99_RS00540 5880185b0096d84a0da6e686c9e843e7 361 PANTHER PTHR11102:SF88 131 354 3.1E-22 T 20-04-2016 AMC99_RS00540 5880185b0096d84a0da6e686c9e843e7 361 SUPERFAMILY SSF81901 106 237 5.1E-18 T 20-04-2016 AMC99_RS00540 5880185b0096d84a0da6e686c9e843e7 361 SMART SM00671 278 313 0.75 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00540 5880185b0096d84a0da6e686c9e843e7 361 SMART SM00671 242 277 0.05 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00540 5880185b0096d84a0da6e686c9e843e7 361 SMART SM00671 314 349 0.021 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00540 5880185b0096d84a0da6e686c9e843e7 361 SMART SM00671 133 168 0.22 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00540 5880185b0096d84a0da6e686c9e843e7 361 SMART SM00671 169 204 4.6 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00540 5880185b0096d84a0da6e686c9e843e7 361 SMART SM00671 205 241 6.1 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00540 5880185b0096d84a0da6e686c9e843e7 361 SUPERFAMILY SSF81901 225 356 2.01E-18 T 20-04-2016 AMC99_RS00540 5880185b0096d84a0da6e686c9e843e7 361 Gene3D G3DSA:1.25.40.10 105 354 3.2E-39 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS06545 35e2dc9e94b541ade2de07d00c46a454 501 PANTHER PTHR12147:SF16 241 499 2.0E-39 T 20-04-2016 AMC99_RS06545 35e2dc9e94b541ade2de07d00c46a454 501 PANTHER PTHR12147:SF16 46 193 2.0E-39 T 20-04-2016 AMC99_RS06545 35e2dc9e94b541ade2de07d00c46a454 501 Gene3D G3DSA:3.40.630.10 47 102 1.1E-45 T 20-04-2016 AMC99_RS06545 35e2dc9e94b541ade2de07d00c46a454 501 Gene3D G3DSA:3.40.630.10 277 496 1.1E-45 T 20-04-2016 AMC99_RS06545 35e2dc9e94b541ade2de07d00c46a454 501 PANTHER PTHR12147 241 499 2.0E-39 T 20-04-2016 AMC99_RS06545 35e2dc9e94b541ade2de07d00c46a454 501 PANTHER PTHR12147 46 193 2.0E-39 T 20-04-2016 AMC99_RS06545 35e2dc9e94b541ade2de07d00c46a454 501 Pfam PF04389 Peptidase family M28 278 476 6.4E-33 T 20-04-2016 IPR007484 Peptidase M28 AMC99_RS06545 35e2dc9e94b541ade2de07d00c46a454 501 SUPERFAMILY SSF53187 48 92 1.67E-47 T 20-04-2016 AMC99_RS06545 35e2dc9e94b541ade2de07d00c46a454 501 SUPERFAMILY SSF53187 262 494 1.67E-47 T 20-04-2016 AMC99_RS01530 01811dc0c2f49e428af3ef358fe95317 139 Pfam PF00072 Response regulator receiver domain 11 119 6.4E-15 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS01530 01811dc0c2f49e428af3ef358fe95317 139 Gene3D G3DSA:3.40.50.2300 9 121 7.9E-23 T 20-04-2016 AMC99_RS01530 01811dc0c2f49e428af3ef358fe95317 139 PANTHER PTHR26402 9 119 5.2E-17 T 20-04-2016 AMC99_RS01530 01811dc0c2f49e428af3ef358fe95317 139 SMART SM00448 9 120 1.9E-12 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS01530 01811dc0c2f49e428af3ef358fe95317 139 SUPERFAMILY SSF52172 10 120 9.39E-21 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS12045 1b9bcdd246bc192909b4383984ef2adf 199 Gene3D G3DSA:1.10.3210.10 63 123 1.6E-4 T 20-04-2016 IPR006674 HD domain AMC99_RS12045 1b9bcdd246bc192909b4383984ef2adf 199 PANTHER PTHR40202:SF1 25 198 5.7E-30 T 20-04-2016 AMC99_RS12045 1b9bcdd246bc192909b4383984ef2adf 199 PANTHER PTHR40202 25 198 5.7E-30 T 20-04-2016 AMC99_RS12045 1b9bcdd246bc192909b4383984ef2adf 199 Pfam PF01966 HD domain 61 148 6.8E-8 T 20-04-2016 IPR006674 HD domain AMC99_RS12045 1b9bcdd246bc192909b4383984ef2adf 199 SUPERFAMILY SSF109604 11 138 1.07E-29 T 20-04-2016 AMC99_RS12310 0441da7f14ed8806ff8bf9a3aebb2fc8 495 Pfam PF02321 Outer membrane efflux protein 31 217 8.9E-30 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMC99_RS12310 0441da7f14ed8806ff8bf9a3aebb2fc8 495 Pfam PF02321 Outer membrane efflux protein 237 428 1.3E-33 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMC99_RS12310 0441da7f14ed8806ff8bf9a3aebb2fc8 495 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 27 435 3.7E-85 T 20-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AMC99_RS12310 0441da7f14ed8806ff8bf9a3aebb2fc8 495 PANTHER PTHR30026 3 456 7.4E-83 T 20-04-2016 AMC99_RS12310 0441da7f14ed8806ff8bf9a3aebb2fc8 495 Gene3D G3DSA:1.20.1600.10 23 429 6.1E-79 T 20-04-2016 AMC99_RS12310 0441da7f14ed8806ff8bf9a3aebb2fc8 495 PANTHER PTHR30026:SF3 3 456 7.4E-83 T 20-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AMC99_RS12310 0441da7f14ed8806ff8bf9a3aebb2fc8 495 SUPERFAMILY SSF56954 8 429 1.06E-89 T 20-04-2016 AMC99_RS07340 8d95c9112f544aed537e19c5ade95507 655 SUPERFAMILY SSF55073 230 384 4.32E-41 T 20-04-2016 IPR029787 Nucleotide cyclase AMC99_RS07340 8d95c9112f544aed537e19c5ade95507 655 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 221 381 3.0E-34 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS07340 8d95c9112f544aed537e19c5ade95507 655 SUPERFAMILY SSF141868 398 634 2.62E-82 T 20-04-2016 IPR001633 EAL domain AMC99_RS07340 8d95c9112f544aed537e19c5ade95507 655 Pfam PF00563 EAL domain 399 629 1.7E-67 T 20-04-2016 IPR001633 EAL domain AMC99_RS07340 8d95c9112f544aed537e19c5ade95507 655 Gene3D G3DSA:3.20.20.450 396 637 4.2E-87 T 20-04-2016 IPR001633 EAL domain AMC99_RS07340 8d95c9112f544aed537e19c5ade95507 655 Gene3D G3DSA:3.30.70.270 226 390 3.3E-50 T 20-04-2016 AMC99_RS07340 8d95c9112f544aed537e19c5ade95507 655 PANTHER PTHR10799:SF657 116 493 4.9E-75 T 20-04-2016 AMC99_RS07340 8d95c9112f544aed537e19c5ade95507 655 SMART SM00052 393 635 1.3E-100 T 20-04-2016 IPR001633 EAL domain AMC99_RS07340 8d95c9112f544aed537e19c5ade95507 655 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 378 8.5E-39 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS07340 8d95c9112f544aed537e19c5ade95507 655 PANTHER PTHR10799 116 493 4.9E-75 T 20-04-2016 AMC99_RS07340 8d95c9112f544aed537e19c5ade95507 655 SMART SM00267 213 383 1.3E-49 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS10035 3cc79f74226448dfe2bd8a72295a4013 223 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 40 190 1.3E-43 T 20-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMC99_RS10035 3cc79f74226448dfe2bd8a72295a4013 223 PIRSF PIRSF016262 4 221 3.0E-52 T 20-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMC99_RS10035 3cc79f74226448dfe2bd8a72295a4013 223 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 168 8.8E-11 T 20-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AMC99_RS10035 3cc79f74226448dfe2bd8a72295a4013 223 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 80 132 3.0E-19 T 20-04-2016 AMC99_RS10035 3cc79f74226448dfe2bd8a72295a4013 223 SUPERFAMILY SSF55681 15 207 4.97E-63 T 20-04-2016 AMC99_RS10035 3cc79f74226448dfe2bd8a72295a4013 223 PANTHER PTHR10993 9 191 3.0E-60 T 20-04-2016 AMC99_RS10035 3cc79f74226448dfe2bd8a72295a4013 223 Hamap MF_00013 Octanoyltransferase [lipB]. 9 215 32.704 T 20-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMC99_RS10035 3cc79f74226448dfe2bd8a72295a4013 223 Gene3D G3DSA:3.90.1550.10 9 205 1.1E-64 T 20-04-2016 AMC99_RS10035 3cc79f74226448dfe2bd8a72295a4013 223 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 75 90 - T 20-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMC99_RS06325 d8e9e2451d557c1e05741dca910dd870 507 Pfam PF02706 Chain length determinant protein 12 123 1.6E-9 T 20-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 AMC99_RS06325 d8e9e2451d557c1e05741dca910dd870 507 PANTHER PTHR32309:SF13 325 468 4.4E-32 T 20-04-2016 AMC99_RS06325 d8e9e2451d557c1e05741dca910dd870 507 PANTHER PTHR32309:SF13 5 308 4.4E-32 T 20-04-2016 AMC99_RS06325 d8e9e2451d557c1e05741dca910dd870 507 TIGRFAM TIGR03007 pepcterm_ChnLen: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily 7 499 6.4E-100 T 20-04-2016 IPR014345 PEP-CTERM locus polysaccharide chain length determinant AMC99_RS06325 d8e9e2451d557c1e05741dca910dd870 507 PANTHER PTHR32309 325 468 4.4E-32 T 20-04-2016 AMC99_RS06325 d8e9e2451d557c1e05741dca910dd870 507 PANTHER PTHR32309 5 308 4.4E-32 T 20-04-2016 AMC99_RS03135 9346c88178a5ba5f78cab65042f5e3bd 194 PANTHER PTHR21471 16 194 2.8E-21 T 20-04-2016 AMC99_RS03135 9346c88178a5ba5f78cab65042f5e3bd 194 PANTHER PTHR21471:SF63 16 194 2.8E-21 T 20-04-2016 AMC99_RS03135 9346c88178a5ba5f78cab65042f5e3bd 194 Gene3D G3DSA:3.40.630.30 10 193 5.6E-29 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS03135 9346c88178a5ba5f78cab65042f5e3bd 194 SUPERFAMILY SSF55729 8 190 1.24E-18 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS03135 9346c88178a5ba5f78cab65042f5e3bd 194 Pfam PF00583 Acetyltransferase (GNAT) family 114 173 5.1E-10 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS11310 ef2f60856db03156746ba63f4a4b13c5 512 Gene3D G3DSA:3.30.450.20 188 305 6.5E-32 T 20-04-2016 AMC99_RS11310 ef2f60856db03156746ba63f4a4b13c5 512 SMART SM00086 266 308 2.0E-8 T 20-04-2016 IPR001610 PAC motif AMC99_RS11310 ef2f60856db03156746ba63f4a4b13c5 512 SMART SM00065 42 186 0.0029 T 20-04-2016 IPR003018 GAF domain GO:0005515 AMC99_RS11310 ef2f60856db03156746ba63f4a4b13c5 512 PANTHER PTHR41523 313 512 1.1E-40 T 20-04-2016 AMC99_RS11310 ef2f60856db03156746ba63f4a4b13c5 512 Pfam PF07536 HWE histidine kinase 321 403 9.0E-15 T 20-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_RS11310 ef2f60856db03156746ba63f4a4b13c5 512 Pfam PF08447 PAS fold 217 302 7.8E-17 T 20-04-2016 IPR013655 PAS fold-3 GO:0005515 AMC99_RS11310 ef2f60856db03156746ba63f4a4b13c5 512 Pfam PF01590 GAF domain 46 170 2.0E-8 T 20-04-2016 IPR003018 GAF domain GO:0005515 AMC99_RS11310 ef2f60856db03156746ba63f4a4b13c5 512 SUPERFAMILY SSF55781 46 180 1.69E-21 T 20-04-2016 IPR029016 GAF domain-like AMC99_RS11310 ef2f60856db03156746ba63f4a4b13c5 512 Gene3D G3DSA:3.30.450.40 44 172 1.5E-9 T 20-04-2016 IPR029016 GAF domain-like AMC99_RS11310 ef2f60856db03156746ba63f4a4b13c5 512 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 190 313 1.9E-14 T 20-04-2016 IPR000014 PAS domain AMC99_RS11310 ef2f60856db03156746ba63f4a4b13c5 512 SUPERFAMILY SSF55785 184 305 2.97E-24 T 20-04-2016 IPR000014 PAS domain AMC99_RS11310 ef2f60856db03156746ba63f4a4b13c5 512 Gene3D G3DSA:3.30.565.10 379 505 3.2E-5 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS11310 ef2f60856db03156746ba63f4a4b13c5 512 SMART SM00091 194 260 6.3E-5 T 20-04-2016 IPR000014 PAS domain AMC99_RS11310 ef2f60856db03156746ba63f4a4b13c5 512 SUPERFAMILY SSF55874 386 504 5.81E-7 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS11310 ef2f60856db03156746ba63f4a4b13c5 512 SMART SM00911 321 404 4.2E-20 T 20-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_RS10380 fc6ba0e4a01b53f6b15dabb71b679be9 134 Pfam PF10000 ACT domain 10 64 6.0E-13 T 20-04-2016 IPR018717 Domain of unknown function DUF2241 AMC99_RS10380 fc6ba0e4a01b53f6b15dabb71b679be9 134 PANTHER PTHR39199:SF1 11 132 4.6E-33 T 20-04-2016 AMC99_RS10380 fc6ba0e4a01b53f6b15dabb71b679be9 134 PANTHER PTHR39199 11 132 4.6E-33 T 20-04-2016 AMC99_RS10380 fc6ba0e4a01b53f6b15dabb71b679be9 134 SUPERFAMILY SSF55021 5 64 1.98E-12 T 20-04-2016 AMC99_RS10380 fc6ba0e4a01b53f6b15dabb71b679be9 134 Gene3D G3DSA:3.30.2130.10 4 130 7.0E-41 T 20-04-2016 AMC99_RS10380 fc6ba0e4a01b53f6b15dabb71b679be9 134 SUPERFAMILY SSF55021 70 129 8.09E-18 T 20-04-2016 AMC99_RS10380 fc6ba0e4a01b53f6b15dabb71b679be9 134 Pfam PF13840 ACT domain 73 127 1.9E-9 T 20-04-2016 IPR027795 GATS-like ACT domain AMC99_RS09750 96e4602a84bce1584a4164ede84be31c 163 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 119 2.1E-19 T 20-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMC99_RS09750 96e4602a84bce1584a4164ede84be31c 163 SUPERFAMILY SSF51316 5 148 1.57E-38 T 20-04-2016 IPR011057 Mss4-like AMC99_RS09750 96e4602a84bce1584a4164ede84be31c 163 Gene3D G3DSA:3.90.1590.10 5 153 5.2E-35 T 20-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMC99_RS09750 96e4602a84bce1584a4164ede84be31c 163 PANTHER PTHR33337 7 159 7.2E-21 T 20-04-2016 AMC99_RS07700 ef5cebe7dd70592c2a0c51c90ef57ace 202 PANTHER PTHR13887 1 202 4.1E-40 T 20-04-2016 AMC99_RS07700 ef5cebe7dd70592c2a0c51c90ef57ace 202 PIRSF PIRSF006386 1 201 6.4E-51 T 20-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa AMC99_RS07700 ef5cebe7dd70592c2a0c51c90ef57ace 202 Gene3D G3DSA:3.40.30.10 6 198 4.7E-48 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS07700 ef5cebe7dd70592c2a0c51c90ef57ace 202 Pfam PF01323 DSBA-like thioredoxin domain 9 198 1.2E-27 T 20-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 AMC99_RS07700 ef5cebe7dd70592c2a0c51c90ef57ace 202 SUPERFAMILY SSF52833 5 200 4.23E-33 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS07700 ef5cebe7dd70592c2a0c51c90ef57ace 202 PANTHER PTHR13887:SF22 1 202 4.1E-40 T 20-04-2016 AMC99_RS00960 34b62e526f35fddec4e6586aee63095e 652 Pfam PF01434 Peptidase family M41 399 608 4.5E-78 T 20-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 AMC99_RS00960 34b62e526f35fddec4e6586aee63095e 652 SUPERFAMILY SSF140990 419 616 7.06E-70 T 20-04-2016 AMC99_RS00960 34b62e526f35fddec4e6586aee63095e 652 PANTHER PTHR23076 2 611 0.0 T 20-04-2016 AMC99_RS00960 34b62e526f35fddec4e6586aee63095e 652 Gene3D G3DSA:1.10.8.60 349 421 1.8E-28 T 20-04-2016 AMC99_RS00960 34b62e526f35fddec4e6586aee63095e 652 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 19 616 36.909 T 20-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AMC99_RS00960 34b62e526f35fddec4e6586aee63095e 652 Gene3D G3DSA:3.40.50.300 161 348 3.2E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00960 34b62e526f35fddec4e6586aee63095e 652 ProSitePatterns PS00674 AAA-protein family signature. 308 326 - T 20-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMC99_RS00960 34b62e526f35fddec4e6586aee63095e 652 SMART SM00382 201 340 1.7E-24 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS00960 34b62e526f35fddec4e6586aee63095e 652 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 206 337 3.4E-45 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_RS00960 34b62e526f35fddec4e6586aee63095e 652 Pfam PF06480 FtsH Extracellular 23 108 6.1E-10 T 20-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 AMC99_RS00960 34b62e526f35fddec4e6586aee63095e 652 SUPERFAMILY SSF52540 159 408 3.87E-72 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00960 34b62e526f35fddec4e6586aee63095e 652 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 117 609 7.8E-231 T 20-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AMC99_RS04465 4202c8da3c82a343739bc00b452ca8bd 510 SUPERFAMILY SSF52096 3 249 1.85E-77 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS04465 4202c8da3c82a343739bc00b452ca8bd 510 SUPERFAMILY SSF52096 223 510 1.1E-88 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS04465 4202c8da3c82a343739bc00b452ca8bd 510 PANTHER PTHR22855:SF40 1 510 0.0 T 20-04-2016 AMC99_RS04465 4202c8da3c82a343739bc00b452ca8bd 510 Pfam PF01039 Carboxyl transferase domain 27 508 2.4E-193 T 20-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS04465 4202c8da3c82a343739bc00b452ca8bd 510 Gene3D G3DSA:3.90.226.10 3 252 1.1E-80 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS04465 4202c8da3c82a343739bc00b452ca8bd 510 PANTHER PTHR22855 1 510 0.0 T 20-04-2016 AMC99_RS04465 4202c8da3c82a343739bc00b452ca8bd 510 Gene3D G3DSA:3.90.226.10 253 510 7.0E-103 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS09535 0e63b92dd2ea5b72329f857741051961 153 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 30.187 T 20-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AMC99_RS09535 0e63b92dd2ea5b72329f857741051961 153 PANTHER PTHR12029 1 147 2.6E-52 T 20-04-2016 AMC99_RS09535 0e63b92dd2ea5b72329f857741051961 153 Gene3D G3DSA:3.40.1280.10 1 149 1.0E-49 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMC99_RS09535 0e63b92dd2ea5b72329f857741051961 153 Pfam PF00588 SpoU rRNA Methylase family 3 144 5.5E-31 T 20-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMC99_RS09535 0e63b92dd2ea5b72329f857741051961 153 PIRSF PIRSF029256 1 152 4.2E-51 T 20-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AMC99_RS09535 0e63b92dd2ea5b72329f857741051961 153 PANTHER PTHR12029:SF31 1 147 2.6E-52 T 20-04-2016 AMC99_RS09535 0e63b92dd2ea5b72329f857741051961 153 SUPERFAMILY SSF75217 3 150 1.37E-34 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases AMC99_RS10865 d3489bd790c1e4035ea6e685fdafea95 167 SUPERFAMILY SSF55083 9 161 1.44E-37 T 20-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMC99_RS10865 d3489bd790c1e4035ea6e685fdafea95 167 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 26 140 6.8E-25 T 20-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMC99_RS10865 d3489bd790c1e4035ea6e685fdafea95 167 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 11 140 6.0E-28 T 20-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMC99_RS10865 d3489bd790c1e4035ea6e685fdafea95 167 Gene3D G3DSA:3.30.70.560 9 161 6.7E-39 T 20-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMC99_RS10865 d3489bd790c1e4035ea6e685fdafea95 167 PANTHER PTHR20941 10 161 9.1E-37 T 20-04-2016 AMC99_RS10865 d3489bd790c1e4035ea6e685fdafea95 167 PANTHER PTHR20941:SF10 10 161 9.1E-37 T 20-04-2016 AMC99_RS06285 41620e04ef803b914dcefc8df41216eb 632 Pfam PF13537 Glutamine amidotransferase domain 48 167 8.2E-48 T 20-04-2016 IPR017932 Glutamine amidotransferase type 2 domain AMC99_RS06285 41620e04ef803b914dcefc8df41216eb 632 TIGRFAM TIGR03108 eps_aminotran_1: exosortase A system-associated amidotransferase 1 1 627 1.7E-290 T 20-04-2016 IPR017539 Exosortase 1 system-associated amidotransferase 1 AMC99_RS06285 41620e04ef803b914dcefc8df41216eb 632 Pfam PF00733 Asparagine synthase 243 624 7.0E-97 T 20-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AMC99_RS06285 41620e04ef803b914dcefc8df41216eb 632 PANTHER PTHR11772:SF10 473 571 3.2E-171 T 20-04-2016 AMC99_RS06285 41620e04ef803b914dcefc8df41216eb 632 PANTHER PTHR11772:SF10 2 384 3.2E-171 T 20-04-2016 AMC99_RS06285 41620e04ef803b914dcefc8df41216eb 632 PANTHER PTHR11772 473 571 3.2E-171 T 20-04-2016 AMC99_RS06285 41620e04ef803b914dcefc8df41216eb 632 PANTHER PTHR11772 2 384 3.2E-171 T 20-04-2016 AMC99_RS06285 41620e04ef803b914dcefc8df41216eb 632 PIRSF PIRSF001589 1 630 5.8E-175 T 20-04-2016 AMC99_RS06285 41620e04ef803b914dcefc8df41216eb 632 SUPERFAMILY SSF56235 1 225 7.46E-66 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS06285 41620e04ef803b914dcefc8df41216eb 632 Gene3D G3DSA:3.60.20.10 1 225 4.0E-78 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS06285 41620e04ef803b914dcefc8df41216eb 632 SUPERFAMILY SSF52402 233 382 3.2E-87 T 20-04-2016 AMC99_RS06285 41620e04ef803b914dcefc8df41216eb 632 SUPERFAMILY SSF52402 481 620 3.2E-87 T 20-04-2016 AMC99_RS06285 41620e04ef803b914dcefc8df41216eb 632 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 561 3.4E-150 T 20-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 AMC99_RS06285 41620e04ef803b914dcefc8df41216eb 632 Gene3D G3DSA:3.40.50.620 226 386 1.6E-81 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS06285 41620e04ef803b914dcefc8df41216eb 632 Gene3D G3DSA:3.40.50.620 485 620 1.6E-81 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS03595 5bfd908cdd1dd01da27b008213208a33 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.755 T 20-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMC99_RS03595 5bfd908cdd1dd01da27b008213208a33 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.3E-39 T 20-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMC99_RS03595 5bfd908cdd1dd01da27b008213208a33 89 Gene3D G3DSA:1.10.287.10 3 89 3.7E-41 T 20-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 AMC99_RS03595 5bfd908cdd1dd01da27b008213208a33 89 SUPERFAMILY SSF47060 3 89 6.18E-37 T 20-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 AMC99_RS03595 5bfd908cdd1dd01da27b008213208a33 89 PANTHER PTHR23321 1 88 1.7E-44 T 20-04-2016 AMC99_RS03595 5bfd908cdd1dd01da27b008213208a33 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 2.0E-35 T 20-04-2016 AMC99_RS03595 5bfd908cdd1dd01da27b008213208a33 89 SMART SM01387 8 88 5.2E-54 T 20-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03595 5bfd908cdd1dd01da27b008213208a33 89 Pfam PF00312 Ribosomal protein S15 8 88 4.3E-39 T 20-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03595 5bfd908cdd1dd01da27b008213208a33 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 20-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS10175 748e8888612197eb19538c2bb0941695 276 PANTHER PTHR37426 1 276 1.3E-85 T 20-04-2016 AMC99_RS10175 748e8888612197eb19538c2bb0941695 276 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 262 36.107 T 20-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AMC99_RS10175 748e8888612197eb19538c2bb0941695 276 PANTHER PTHR37426:SF1 1 276 1.3E-85 T 20-04-2016 AMC99_RS10175 748e8888612197eb19538c2bb0941695 276 SUPERFAMILY SSF53335 8 267 1.66E-72 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10175 748e8888612197eb19538c2bb0941695 276 Gene3D G3DSA:3.40.50.150 1 267 6.1E-86 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10175 748e8888612197eb19538c2bb0941695 276 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 34 274 2.7E-62 T 20-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AMC99_RS05920 2852de44bc729c743d6d71dd48cd662c 272 Pfam PF00795 Carbon-nitrogen hydrolase 3 259 1.5E-49 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMC99_RS05920 2852de44bc729c743d6d71dd48cd662c 272 PANTHER PTHR23088:SF27 3 269 3.0E-97 T 20-04-2016 AMC99_RS05920 2852de44bc729c743d6d71dd48cd662c 272 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 151 171 - T 20-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site AMC99_RS05920 2852de44bc729c743d6d71dd48cd662c 272 PANTHER PTHR23088 3 269 3.0E-97 T 20-04-2016 AMC99_RS05920 2852de44bc729c743d6d71dd48cd662c 272 Gene3D G3DSA:3.60.110.10 2 268 6.6E-79 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMC99_RS05920 2852de44bc729c743d6d71dd48cd662c 272 SUPERFAMILY SSF56317 3 267 1.24E-76 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMC99_RS04190 aa29a873c1b0968ae431c93499ab012b 448 Pfam PF09312 SurA N-terminal domain 57 169 3.4E-13 T 20-04-2016 IPR015391 SurA N-terminal AMC99_RS04190 aa29a873c1b0968ae431c93499ab012b 448 SUPERFAMILY SSF109998 56 222 1.49E-30 T 20-04-2016 IPR027304 Trigger factor/SurA domain AMC99_RS04190 aa29a873c1b0968ae431c93499ab012b 448 SUPERFAMILY SSF54534 311 407 1.31E-7 T 20-04-2016 AMC99_RS04190 aa29a873c1b0968ae431c93499ab012b 448 PANTHER PTHR10657:SF11 58 298 8.3E-33 T 20-04-2016 AMC99_RS04190 aa29a873c1b0968ae431c93499ab012b 448 Pfam PF00639 PPIC-type PPIASE domain 211 295 4.5E-14 T 20-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AMC99_RS04190 aa29a873c1b0968ae431c93499ab012b 448 PANTHER PTHR10657 58 298 8.3E-33 T 20-04-2016 AMC99_RS04190 aa29a873c1b0968ae431c93499ab012b 448 SUPERFAMILY SSF54534 198 299 1.77E-19 T 20-04-2016 AMC99_RS04190 aa29a873c1b0968ae431c93499ab012b 448 Gene3D G3DSA:3.10.50.40 312 431 2.9E-4 T 20-04-2016 AMC99_RS04190 aa29a873c1b0968ae431c93499ab012b 448 Gene3D G3DSA:3.10.50.40 194 300 3.4E-20 T 20-04-2016 AMC99_RS06530 e48a9e6788a58587d84a7c8115f42636 178 Pfam PF13432 Tetratricopeptide repeat 53 115 8.3E-9 T 20-04-2016 AMC99_RS06530 e48a9e6788a58587d84a7c8115f42636 178 SUPERFAMILY SSF48452 47 146 9.7E-15 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS06530 e48a9e6788a58587d84a7c8115f42636 178 Gene3D G3DSA:1.25.40.10 48 142 5.8E-15 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS06530 e48a9e6788a58587d84a7c8115f42636 178 SMART SM00028 82 115 9.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS06530 e48a9e6788a58587d84a7c8115f42636 178 SMART SM00028 48 81 0.0056 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS12705 66e19813283c8883152e181a647d77d6 333 Gene3D G3DSA:3.20.20.370 105 183 6.5E-7 T 20-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_RS12705 66e19813283c8883152e181a647d77d6 333 Gene3D G3DSA:3.20.20.370 231 316 6.5E-7 T 20-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_RS12705 66e19813283c8883152e181a647d77d6 333 Gene3D G3DSA:3.20.20.370 37 62 6.5E-7 T 20-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_RS12705 66e19813283c8883152e181a647d77d6 333 SUPERFAMILY SSF88713 255 316 8.34E-14 T 20-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_RS12705 66e19813283c8883152e181a647d77d6 333 SUPERFAMILY SSF88713 32 58 8.34E-14 T 20-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_RS12705 66e19813283c8883152e181a647d77d6 333 SUPERFAMILY SSF88713 103 218 8.34E-14 T 20-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_RS09385 6a16ceb3e652d913aedae7195f88c856 322 Gene3D G3DSA:3.40.50.1820 30 317 2.3E-28 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS09385 6a16ceb3e652d913aedae7195f88c856 322 Pfam PF12146 Serine aminopeptidase, S33 45 301 4.8E-34 T 20-04-2016 IPR022742 Serine aminopeptidase, S33 AMC99_RS09385 6a16ceb3e652d913aedae7195f88c856 322 SUPERFAMILY SSF53474 21 317 1.01E-31 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS09385 6a16ceb3e652d913aedae7195f88c856 322 PANTHER PTHR11614:SF100 22 319 3.4E-37 T 20-04-2016 AMC99_RS09385 6a16ceb3e652d913aedae7195f88c856 322 PANTHER PTHR11614 22 319 3.4E-37 T 20-04-2016 AMC99_RS05050 7f15f264be4885261bc656ff8218f5be 382 PANTHER PTHR10578 1 380 1.4E-137 T 20-04-2016 AMC99_RS05050 7f15f264be4885261bc656ff8218f5be 382 Pfam PF01070 FMN-dependent dehydrogenase 16 379 1.3E-127 T 20-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 AMC99_RS05050 7f15f264be4885261bc656ff8218f5be 382 PANTHER PTHR10578:SF65 1 380 1.4E-137 T 20-04-2016 AMC99_RS05050 7f15f264be4885261bc656ff8218f5be 382 PIRSF PIRSF000138 1 382 2.3E-125 T 20-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AMC99_RS05050 7f15f264be4885261bc656ff8218f5be 382 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 277 283 - T 20-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AMC99_RS05050 7f15f264be4885261bc656ff8218f5be 382 SUPERFAMILY SSF51395 5 381 9.77E-98 T 20-04-2016 AMC99_RS05050 7f15f264be4885261bc656ff8218f5be 382 Gene3D G3DSA:3.20.20.70 6 380 3.5E-129 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS08475 31cd93d02587fad2b28c01fbf8492917 301 PANTHER PTHR22911 10 294 1.3E-46 T 20-04-2016 AMC99_RS08475 31cd93d02587fad2b28c01fbf8492917 301 SUPERFAMILY SSF103481 189 288 1.44E-12 T 20-04-2016 AMC99_RS08475 31cd93d02587fad2b28c01fbf8492917 301 SUPERFAMILY SSF103481 47 149 1.44E-14 T 20-04-2016 AMC99_RS08475 31cd93d02587fad2b28c01fbf8492917 301 Pfam PF00892 EamA-like transporter family 155 284 6.2E-10 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_RS08475 31cd93d02587fad2b28c01fbf8492917 301 Pfam PF00892 EamA-like transporter family 12 145 2.2E-8 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_RS03365 3e0b7590d5a47d38e2b9b09df7c20925 384 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 377 2.0E-136 T 20-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS03365 3e0b7590d5a47d38e2b9b09df7c20925 384 SUPERFAMILY SSF69055 290 382 1.16E-29 T 20-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS03365 3e0b7590d5a47d38e2b9b09df7c20925 384 Gene3D G3DSA:1.10.1740.10 301 383 6.2E-29 T 20-04-2016 AMC99_RS03365 3e0b7590d5a47d38e2b9b09df7c20925 384 PANTHER PTHR30525 3 382 5.0E-202 T 20-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS03365 3e0b7590d5a47d38e2b9b09df7c20925 384 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 144 227 4.6E-40 T 20-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS03365 3e0b7590d5a47d38e2b9b09df7c20925 384 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 130 1.1E-37 T 20-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS03365 3e0b7590d5a47d38e2b9b09df7c20925 384 PIRSF PIRSF006205 2 384 1.1E-144 T 20-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS03365 3e0b7590d5a47d38e2b9b09df7c20925 384 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 380 44.129 T 20-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS03365 3e0b7590d5a47d38e2b9b09df7c20925 384 SUPERFAMILY SSF55347 124 261 1.67E-59 T 20-04-2016 AMC99_RS03365 3e0b7590d5a47d38e2b9b09df7c20925 384 SUPERFAMILY SSF51735 3 148 1.02E-44 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS03365 3e0b7590d5a47d38e2b9b09df7c20925 384 Pfam PF13288 DXP reductoisomerase C-terminal domain 259 374 2.1E-38 T 20-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS03365 3e0b7590d5a47d38e2b9b09df7c20925 384 Gene3D G3DSA:3.40.50.720 2 148 1.4E-45 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS06575 8a1690f358886fe870b5b12f5ebf590f 143 Gene3D G3DSA:1.10.10.10 24 98 3.3E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS06575 8a1690f358886fe870b5b12f5ebf590f 143 PANTHER PTHR34134:SF1 11 143 3.9E-30 T 20-04-2016 AMC99_RS06575 8a1690f358886fe870b5b12f5ebf590f 143 PANTHER PTHR34134 11 143 3.9E-30 T 20-04-2016 AMC99_RS06575 8a1690f358886fe870b5b12f5ebf590f 143 SUPERFAMILY SSF46785 24 142 6.23E-29 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS06575 8a1690f358886fe870b5b12f5ebf590f 143 PIRSF PIRSF019455 18 143 1.9E-34 T 20-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AMC99_RS06575 8a1690f358886fe870b5b12f5ebf590f 143 Pfam PF03965 Penicillinase repressor 25 139 6.8E-30 T 20-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AMC99_RS02675 ded4dad0e85b266abfb7eea6dba17ddc 279 PANTHER PTHR36151:SF3 5 219 1.0E-50 T 20-04-2016 AMC99_RS02675 ded4dad0e85b266abfb7eea6dba17ddc 279 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 47 265 2.8E-47 T 20-04-2016 IPR018713 Domain of unknown function DUF2236 AMC99_RS02675 ded4dad0e85b266abfb7eea6dba17ddc 279 PANTHER PTHR36151 5 219 1.0E-50 T 20-04-2016 AMC99_RS12955 35e281e2e7b72359ad5520017dd8f469 166 PANTHER PTHR34473 13 159 6.4E-28 T 20-04-2016 AMC99_RS12955 35e281e2e7b72359ad5520017dd8f469 166 PANTHER PTHR34473:SF2 13 159 6.4E-28 T 20-04-2016 AMC99_RS12955 35e281e2e7b72359ad5520017dd8f469 166 Pfam PF03703 Bacterial PH domain 82 157 3.2E-17 T 20-04-2016 IPR005182 Domain of unknown function DUF304 AMC99_RS09730 6c39e38a7252c5f5f1b898f300a4f497 222 Pfam PF00912 Transglycosylase 44 193 8.9E-45 T 20-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMC99_RS09730 6c39e38a7252c5f5f1b898f300a4f497 222 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 6 213 5.4E-72 T 20-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 AMC99_RS09730 6c39e38a7252c5f5f1b898f300a4f497 222 Gene3D G3DSA:1.10.3810.10 38 210 1.4E-52 T 20-04-2016 AMC99_RS09730 6c39e38a7252c5f5f1b898f300a4f497 222 PANTHER PTHR30400:SF0 1 210 1.6E-72 T 20-04-2016 AMC99_RS09730 6c39e38a7252c5f5f1b898f300a4f497 222 SUPERFAMILY SSF53955 43 210 1.38E-51 T 20-04-2016 IPR023346 Lysozyme-like domain AMC99_RS09730 6c39e38a7252c5f5f1b898f300a4f497 222 PANTHER PTHR30400 1 210 1.6E-72 T 20-04-2016 AMC99_RS09730 6c39e38a7252c5f5f1b898f300a4f497 222 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 1 215 37.082 T 20-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 AMC99_RS03420 757b78933f0674faabae8e500054b762 240 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 222 5.6E-63 T 20-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03420 757b78933f0674faabae8e500054b762 240 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 199 223 2.7E-46 T 20-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03420 757b78933f0674faabae8e500054b762 240 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 117 137 2.7E-46 T 20-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03420 757b78933f0674faabae8e500054b762 240 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 152 178 2.7E-46 T 20-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03420 757b78933f0674faabae8e500054b762 240 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 96 116 2.7E-46 T 20-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03420 757b78933f0674faabae8e500054b762 240 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 41 58 2.7E-46 T 20-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03420 757b78933f0674faabae8e500054b762 240 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 58 78 2.7E-46 T 20-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS03420 757b78933f0674faabae8e500054b762 240 Pfam PF01578 Cytochrome C assembly protein 26 180 1.2E-22 T 20-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMC99_RS03420 757b78933f0674faabae8e500054b762 240 PANTHER PTHR30071 1 219 1.4E-49 T 20-04-2016 AMC99_RS02850 773ef37520061a2841a6afab8ee26f6b 295 Pfam PF10118 Predicted metal-dependent hydrolase 27 275 3.1E-74 T 20-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 AMC99_RS02850 773ef37520061a2841a6afab8ee26f6b 295 PANTHER PTHR39456:SF2 14 293 1.3E-56 T 20-04-2016 AMC99_RS02850 773ef37520061a2841a6afab8ee26f6b 295 PANTHER PTHR39456 14 293 1.3E-56 T 20-04-2016 AMC99_RS02850 773ef37520061a2841a6afab8ee26f6b 295 PIRSF PIRSF007580 11 293 1.9E-66 T 20-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 AMC99_RS01895 8f3133f40fb5d710bf90915ad51115f0 518 PANTHER PTHR23023:SF30 13 490 3.0E-184 T 20-04-2016 AMC99_RS01895 8f3133f40fb5d710bf90915ad51115f0 518 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 17 253 4.6E-8 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01895 8f3133f40fb5d710bf90915ad51115f0 518 Gene3D G3DSA:3.50.50.60 338 478 4.9E-9 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01895 8f3133f40fb5d710bf90915ad51115f0 518 Gene3D G3DSA:3.50.50.60 4 227 2.5E-44 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01895 8f3133f40fb5d710bf90915ad51115f0 518 PANTHER PTHR23023 13 490 3.0E-184 T 20-04-2016 AMC99_RS01895 8f3133f40fb5d710bf90915ad51115f0 518 SUPERFAMILY SSF51905 12 401 2.29E-48 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS02650 3d187156ce68c4e6d1d0be8ed9b1cf65 162 Gene3D G3DSA:3.10.180.10 6 132 4.6E-41 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS02650 3d187156ce68c4e6d1d0be8ed9b1cf65 162 PANTHER PTHR33990 5 162 3.7E-76 T 20-04-2016 AMC99_RS02650 3d187156ce68c4e6d1d0be8ed9b1cf65 162 PIRSF PIRSF021700 3 161 7.9E-61 T 20-04-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase AMC99_RS02650 3d187156ce68c4e6d1d0be8ed9b1cf65 162 SUPERFAMILY SSF54593 7 159 3.04E-46 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS02650 3d187156ce68c4e6d1d0be8ed9b1cf65 162 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 7 122 3.6E-43 T 20-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase AMC99_RS02650 3d187156ce68c4e6d1d0be8ed9b1cf65 162 PANTHER PTHR33990:SF3 5 162 3.7E-76 T 20-04-2016 AMC99_RS02405 fc8d5c26d8d244e40c36f5a619d5fafa 446 Gene3D G3DSA:2.160.20.10 28 364 5.5E-29 T 20-04-2016 IPR012334 Pectin lyase fold AMC99_RS02405 fc8d5c26d8d244e40c36f5a619d5fafa 446 PANTHER PTHR31683:SF9 30 249 9.0E-34 T 20-04-2016 AMC99_RS02405 fc8d5c26d8d244e40c36f5a619d5fafa 446 SUPERFAMILY SSF51126 8 365 3.14E-35 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor AMC99_RS02405 fc8d5c26d8d244e40c36f5a619d5fafa 446 PANTHER PTHR31683 30 249 9.0E-34 T 20-04-2016 AMC99_RS02640 b5edf2975bd9085e633b2ad381a2c8a5 197 Pfam PF00226 DnaJ domain 142 193 3.3E-8 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS02640 b5edf2975bd9085e633b2ad381a2c8a5 197 SMART SM00271 137 195 1.8E-6 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS02640 b5edf2975bd9085e633b2ad381a2c8a5 197 PRINTS PR00625 DnaJ domain signature 175 195 1.9E-5 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS02640 b5edf2975bd9085e633b2ad381a2c8a5 197 PRINTS PR00625 DnaJ domain signature 140 158 1.9E-5 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS02640 b5edf2975bd9085e633b2ad381a2c8a5 197 PRINTS PR00625 DnaJ domain signature 158 173 1.9E-5 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS02640 b5edf2975bd9085e633b2ad381a2c8a5 197 Gene3D G3DSA:1.10.287.110 143 192 2.3E-9 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS02640 b5edf2975bd9085e633b2ad381a2c8a5 197 SUPERFAMILY SSF46565 139 192 6.28E-11 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS06360 e16bed101d1832eebe5cc9cf79115d6c 260 Pfam PF12146 Serine aminopeptidase, S33 39 223 1.1E-7 T 20-04-2016 IPR022742 Serine aminopeptidase, S33 AMC99_RS06360 e16bed101d1832eebe5cc9cf79115d6c 260 Gene3D G3DSA:3.40.50.1820 27 132 1.8E-14 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS06360 e16bed101d1832eebe5cc9cf79115d6c 260 Gene3D G3DSA:3.40.50.1820 194 255 1.8E-14 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS06360 e16bed101d1832eebe5cc9cf79115d6c 260 TIGRFAM TIGR03100 hydr1_PEP: exosortase A system-associated hydrolase 1 5 258 1.3E-65 T 20-04-2016 IPR017531 Hydrolase, ortholog 1, exosortase system type 1 associated AMC99_RS06360 e16bed101d1832eebe5cc9cf79115d6c 260 SUPERFAMILY SSF53474 196 258 9.51E-18 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS06360 e16bed101d1832eebe5cc9cf79115d6c 260 SUPERFAMILY SSF53474 6 135 9.51E-18 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS12485 6128990b078f9224c221548eacfc7e7e 493 Gene3D G3DSA:2.120.10.30 139 454 5.7E-54 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMC99_RS12485 6128990b078f9224c221548eacfc7e7e 493 Gene3D G3DSA:2.120.10.30 70 103 5.7E-54 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMC99_RS12485 6128990b078f9224c221548eacfc7e7e 493 SUPERFAMILY SSF50952 139 452 3.79E-35 T 20-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMC99_RS12485 6128990b078f9224c221548eacfc7e7e 493 SUPERFAMILY SSF50952 73 103 3.79E-35 T 20-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMC99_RS12485 6128990b078f9224c221548eacfc7e7e 493 PANTHER PTHR19328:SF26 142 452 5.4E-113 T 20-04-2016 AMC99_RS12485 6128990b078f9224c221548eacfc7e7e 493 PANTHER PTHR19328:SF26 1 106 5.4E-113 T 20-04-2016 AMC99_RS12485 6128990b078f9224c221548eacfc7e7e 493 Pfam PF07995 Glucose / Sorbosone dehydrogenase 254 363 7.7E-9 T 20-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 AMC99_RS12485 6128990b078f9224c221548eacfc7e7e 493 PANTHER PTHR19328 142 452 5.4E-113 T 20-04-2016 AMC99_RS12485 6128990b078f9224c221548eacfc7e7e 493 PANTHER PTHR19328 1 106 5.4E-113 T 20-04-2016 AMC99_RS00970 4fe0374ab4b09c8102821ff6fc05075d 374 Pfam PF12412 Protein of unknown function (DUF3667) 61 105 4.5E-19 T 20-04-2016 IPR022134 Protein of unknown function DUF3667 AMC99_RS06190 3c5b81548a133062d30717191c8a45e8 472 Gene3D G3DSA:3.20.20.70 31 308 3.8E-4 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS06190 3c5b81548a133062d30717191c8a45e8 472 PANTHER PTHR32332 85 316 1.6E-13 T 20-04-2016 AMC99_RS06190 3c5b81548a133062d30717191c8a45e8 472 PANTHER PTHR32332 40 56 1.6E-13 T 20-04-2016 AMC99_RS06190 3c5b81548a133062d30717191c8a45e8 472 SUPERFAMILY SSF51412 33 55 2.75E-6 T 20-04-2016 AMC99_RS06190 3c5b81548a133062d30717191c8a45e8 472 SUPERFAMILY SSF51412 85 316 2.75E-6 T 20-04-2016 AMC99_RS00845 bcdd100535ac254fda554423ed873244 482 PANTHER PTHR30250:SF0 2 481 1.1E-37 T 20-04-2016 AMC99_RS00845 bcdd100535ac254fda554423ed873244 482 Pfam PF13440 Polysaccharide biosynthesis protein 32 327 1.3E-16 T 20-04-2016 AMC99_RS00845 bcdd100535ac254fda554423ed873244 482 PANTHER PTHR30250 2 481 1.1E-37 T 20-04-2016 AMC99_RS01240 59f2f3a5237027ac94e05f9ee9e9059e 219 SUPERFAMILY SSF54427 14 216 5.43E-46 T 20-04-2016 IPR032710 NTF2-like domain AMC99_RS01240 59f2f3a5237027ac94e05f9ee9e9059e 219 Pfam PF04280 Tim44-like domain 73 217 4.8E-43 T 20-04-2016 IPR007379 Tim44-like domain AMC99_RS01240 59f2f3a5237027ac94e05f9ee9e9059e 219 PIRSF PIRSF031890 1 219 9.3E-58 T 20-04-2016 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related AMC99_RS01240 59f2f3a5237027ac94e05f9ee9e9059e 219 PANTHER PTHR10721:SF2 71 205 3.8E-20 T 20-04-2016 AMC99_RS01240 59f2f3a5237027ac94e05f9ee9e9059e 219 PANTHER PTHR10721 71 205 3.8E-20 T 20-04-2016 AMC99_RS01240 59f2f3a5237027ac94e05f9ee9e9059e 219 SMART SM00978 72 218 7.5E-47 T 20-04-2016 IPR007379 Tim44-like domain AMC99_RS09890 5985181ff03a1e643dad1c450b6a745c 254 SUPERFAMILY SSF64167 1 252 9.55E-76 T 20-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AMC99_RS09890 5985181ff03a1e643dad1c450b6a745c 254 PANTHER PTHR30457 1 252 6.7E-76 T 20-04-2016 AMC99_RS09890 5985181ff03a1e643dad1c450b6a745c 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 254 35.559 T 20-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AMC99_RS09890 5985181ff03a1e643dad1c450b6a745c 254 Pfam PF01975 Survival protein SurE 3 188 7.6E-52 T 20-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AMC99_RS09890 5985181ff03a1e643dad1c450b6a745c 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 240 7.2E-65 T 20-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AMC99_RS09890 5985181ff03a1e643dad1c450b6a745c 254 Gene3D G3DSA:3.40.1210.10 1 249 2.9E-79 T 20-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AMC99_RS09085 15d7768bde3d9465a2d00a935973f483 300 Pfam PF03799 Cell division protein FtsQ 164 278 2.7E-11 T 20-04-2016 IPR005548 Cell division protein FtsQ/DivIB AMC99_RS09085 15d7768bde3d9465a2d00a935973f483 300 PANTHER PTHR35851 10 283 7.1E-16 T 20-04-2016 AMC99_RS09085 15d7768bde3d9465a2d00a935973f483 300 PANTHER PTHR35851:SF1 10 283 7.1E-16 T 20-04-2016 AMC99_RS09085 15d7768bde3d9465a2d00a935973f483 300 Pfam PF08478 POTRA domain, FtsQ-type 91 159 4.4E-14 T 20-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type AMC99_RS09085 15d7768bde3d9465a2d00a935973f483 300 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 60 296 20.622 T 20-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 AMC99_RS04045 84f84aeeb654baad7fa254d8f37c8ddf 225 PIRSF PIRSF038959 1 219 1.4E-37 T 20-04-2016 IPR026272 Immunity protein SdpI AMC99_RS04045 84f84aeeb654baad7fa254d8f37c8ddf 225 PANTHER PTHR37810 1 217 2.1E-20 T 20-04-2016 AMC99_RS04045 84f84aeeb654baad7fa254d8f37c8ddf 225 Pfam PF13630 SdpI/YhfL protein family 140 208 5.4E-16 T 20-04-2016 IPR025962 SdpI/YhfL protein family AMC99_RS04045 84f84aeeb654baad7fa254d8f37c8ddf 225 PANTHER PTHR37810:SF1 1 217 2.1E-20 T 20-04-2016 AMC99_RS04045 84f84aeeb654baad7fa254d8f37c8ddf 225 Pfam PF07853 Protein of unknown function (DUF1648) 13 61 7.4E-9 T 20-04-2016 IPR012867 Domain of unknown function DUF1648 AMC99_RS03530 c5df199833cf5ee7350908b67fa7abf8 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.3E-14 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMC99_RS03530 c5df199833cf5ee7350908b67fa7abf8 78 PANTHER PTHR20863 3 76 3.5E-29 T 20-04-2016 AMC99_RS03530 c5df199833cf5ee7350908b67fa7abf8 78 SUPERFAMILY SSF47336 2 76 1.01E-23 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMC99_RS03530 c5df199833cf5ee7350908b67fa7abf8 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.948 T 20-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AMC99_RS03530 c5df199833cf5ee7350908b67fa7abf8 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 77 4.8E-34 T 20-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AMC99_RS03530 c5df199833cf5ee7350908b67fa7abf8 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 5.0E-13 T 20-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AMC99_RS03530 c5df199833cf5ee7350908b67fa7abf8 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 20-04-2016 IPR006162 Phosphopantetheine attachment site AMC99_RS03530 c5df199833cf5ee7350908b67fa7abf8 78 Gene3D G3DSA:1.10.1200.10 3 76 1.6E-33 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMC99_RS05750 aef334717760f8adeebeaec74404b563 258 PIRSF PIRSF005902 1 258 1.3E-75 T 20-04-2016 IPR001130 TatD family GO:0016788 AMC99_RS05750 aef334717760f8adeebeaec74404b563 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 20-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMC99_RS05750 aef334717760f8adeebeaec74404b563 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 4.1E-83 T 20-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 AMC99_RS05750 aef334717760f8adeebeaec74404b563 258 Pfam PF01026 TatD related DNase 3 253 2.0E-76 T 20-04-2016 IPR001130 TatD family GO:0016788 AMC99_RS05750 aef334717760f8adeebeaec74404b563 258 SUPERFAMILY SSF51556 2 254 1.52E-84 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS05750 aef334717760f8adeebeaec74404b563 258 PANTHER PTHR10060 1 257 3.0E-112 T 20-04-2016 IPR001130 TatD family GO:0016788 AMC99_RS05750 aef334717760f8adeebeaec74404b563 258 PANTHER PTHR10060:SF20 1 257 3.0E-112 T 20-04-2016 AMC99_RS05750 aef334717760f8adeebeaec74404b563 258 Gene3D G3DSA:3.20.20.140 1 254 3.2E-84 T 20-04-2016 AMC99_RS05750 aef334717760f8adeebeaec74404b563 258 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 20-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMC99_RS07815 e780b5fd10463fc4f26ad38baa1977dc 362 Gene3D G3DSA:3.30.450.20 57 176 9.4E-8 T 20-04-2016 AMC99_RS07815 e780b5fd10463fc4f26ad38baa1977dc 362 SUPERFAMILY SSF55785 53 176 2.18E-6 T 20-04-2016 IPR000014 PAS domain AMC99_RS07815 e780b5fd10463fc4f26ad38baa1977dc 362 SUPERFAMILY SSF55073 208 359 4.08E-45 T 20-04-2016 IPR029787 Nucleotide cyclase AMC99_RS07815 e780b5fd10463fc4f26ad38baa1977dc 362 PANTHER PTHR10799 109 357 3.0E-27 T 20-04-2016 AMC99_RS07815 e780b5fd10463fc4f26ad38baa1977dc 362 SMART SM00267 192 361 3.2E-56 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS07815 e780b5fd10463fc4f26ad38baa1977dc 362 Pfam PF00990 Diguanylate cyclase, GGDEF domain 203 357 4.3E-41 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS07815 e780b5fd10463fc4f26ad38baa1977dc 362 PANTHER PTHR10799:SF750 109 357 3.0E-27 T 20-04-2016 AMC99_RS07815 e780b5fd10463fc4f26ad38baa1977dc 362 Gene3D G3DSA:3.30.70.270 205 360 1.7E-50 T 20-04-2016 AMC99_RS07815 e780b5fd10463fc4f26ad38baa1977dc 362 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 201 360 5.8E-45 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS01945 4900e656735fe0400859f63675bff626 115 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 16 100 4.9E-7 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMC99_RS01945 4900e656735fe0400859f63675bff626 115 SUPERFAMILY SSF69754 14 97 1.06E-6 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMC99_RS01945 4900e656735fe0400859f63675bff626 115 Gene3D G3DSA:3.30.160.100 11 104 1.4E-6 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMC99_RS13570 974bf85e7d0222244c5275535e37dfa8 385 Gene3D G3DSA:3.40.50.10540 321 383 6.8E-102 T 20-04-2016 IPR023606 CoA-transferase family III domain AMC99_RS13570 974bf85e7d0222244c5275535e37dfa8 385 Gene3D G3DSA:3.40.50.10540 9 232 6.8E-102 T 20-04-2016 IPR023606 CoA-transferase family III domain AMC99_RS13570 974bf85e7d0222244c5275535e37dfa8 385 PANTHER PTHR24023 70 351 2.0E-30 T 20-04-2016 AMC99_RS13570 974bf85e7d0222244c5275535e37dfa8 385 SUPERFAMILY SSF89796 12 384 2.22E-127 T 20-04-2016 IPR023606 CoA-transferase family III domain AMC99_RS13570 974bf85e7d0222244c5275535e37dfa8 385 Pfam PF02515 CoA-transferase family III 13 382 5.1E-119 T 20-04-2016 IPR003673 CoA-transferase family III GO:0003824 AMC99_RS13570 974bf85e7d0222244c5275535e37dfa8 385 PANTHER PTHR24023:SF593 70 351 2.0E-30 T 20-04-2016 AMC99_RS13570 974bf85e7d0222244c5275535e37dfa8 385 Gene3D G3DSA:3.30.1540.10 238 320 1.2E-27 T 20-04-2016 AMC99_RS08510 cce3a20ce02cb1073aaebbad23f6c72c 336 Gene3D G3DSA:1.10.760.10 238 334 8.7E-4 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS08510 cce3a20ce02cb1073aaebbad23f6c72c 336 TIGRFAM TIGR03806 chp_HNE_0200: conserved hypothetical protein, HNE_0200 family 39 334 2.0E-109 T 20-04-2016 IPR022269 Conserved hypothetical protein CHP03806, HNE0200 family AMC99_RS03930 e995eaa0dfe6f70af398cd4f193375b5 120 Gene3D G3DSA:3.40.50.2300 2 116 1.4E-15 T 20-04-2016 AMC99_RS03930 e995eaa0dfe6f70af398cd4f193375b5 120 Pfam PF00072 Response regulator receiver domain 6 112 1.1E-7 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS03930 e995eaa0dfe6f70af398cd4f193375b5 120 SMART SM00448 4 112 4.9E-5 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS03930 e995eaa0dfe6f70af398cd4f193375b5 120 SUPERFAMILY SSF52172 1 115 2.85E-16 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS06735 e4e35df9d297fc8f3f8cdf432e7db427 589 SUPERFAMILY SSF51556 364 508 1.63E-65 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS06735 e4e35df9d297fc8f3f8cdf432e7db427 589 SUPERFAMILY SSF51556 57 309 1.63E-65 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS06735 e4e35df9d297fc8f3f8cdf432e7db427 589 Pfam PF07969 Amidohydrolase family 45 562 1.4E-49 T 20-04-2016 IPR013108 Amidohydrolase 3 AMC99_RS06735 e4e35df9d297fc8f3f8cdf432e7db427 589 Gene3D G3DSA:3.20.20.140 425 492 1.7E-84 T 20-04-2016 AMC99_RS06735 e4e35df9d297fc8f3f8cdf432e7db427 589 Gene3D G3DSA:3.20.20.140 71 301 1.7E-84 T 20-04-2016 AMC99_RS06735 e4e35df9d297fc8f3f8cdf432e7db427 589 Gene3D G3DSA:2.30.40.10 4 70 1.0E-20 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS06735 e4e35df9d297fc8f3f8cdf432e7db427 589 SUPERFAMILY SSF51338 508 574 2.88E-22 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS06735 e4e35df9d297fc8f3f8cdf432e7db427 589 SUPERFAMILY SSF51338 4 56 2.88E-22 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS06735 e4e35df9d297fc8f3f8cdf432e7db427 589 Gene3D G3DSA:2.30.40.10 493 574 1.1E-11 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS06735 e4e35df9d297fc8f3f8cdf432e7db427 589 PANTHER PTHR11647 1 90 3.0E-18 T 20-04-2016 AMC99_RS07860 9a8a01da53c940b8b976919a2d8ebb7b 306 Pfam PF01553 Acyltransferase 98 211 1.6E-18 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMC99_RS07860 9a8a01da53c940b8b976919a2d8ebb7b 306 SMART SM00563 100 214 7.0E-25 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMC99_RS07860 9a8a01da53c940b8b976919a2d8ebb7b 306 PANTHER PTHR23063 31 275 9.0E-23 T 20-04-2016 AMC99_RS07860 9a8a01da53c940b8b976919a2d8ebb7b 306 PANTHER PTHR23063:SF1 31 275 9.0E-23 T 20-04-2016 AMC99_RS07860 9a8a01da53c940b8b976919a2d8ebb7b 306 Gene3D G3DSA:3.40.1130.10 97 194 7.0E-11 T 20-04-2016 AMC99_RS07860 9a8a01da53c940b8b976919a2d8ebb7b 306 SUPERFAMILY SSF69593 43 261 1.02E-27 T 20-04-2016 AMC99_RS07820 b7614f7ba3c3d4b5773dd82d5ac6b02e 457 Pfam PF01474 Class-II DAHP synthetase family 5 442 1.9E-196 T 20-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AMC99_RS07820 b7614f7ba3c3d4b5773dd82d5ac6b02e 457 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 5 447 2.5E-211 T 20-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AMC99_RS07820 b7614f7ba3c3d4b5773dd82d5ac6b02e 457 PANTHER PTHR21337 5 448 1.6E-280 T 20-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AMC99_RS07820 b7614f7ba3c3d4b5773dd82d5ac6b02e 457 SUPERFAMILY SSF51569 3 446 1.46E-198 T 20-04-2016 AMC99_RS06020 37d989a702a30abfec172dfb3762376a 459 SUPERFAMILY SSF47384 248 304 3.92E-5 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_RS06020 37d989a702a30abfec172dfb3762376a 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 416 4.8E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS06020 37d989a702a30abfec172dfb3762376a 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 4.8E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS06020 37d989a702a30abfec172dfb3762376a 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 4.8E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS06020 37d989a702a30abfec172dfb3762376a 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 4.8E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMC99_RS06020 37d989a702a30abfec172dfb3762376a 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 458 5.3E-24 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS06020 37d989a702a30abfec172dfb3762376a 459 SMART SM00387 350 459 1.2E-31 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS06020 37d989a702a30abfec172dfb3762376a 459 SUPERFAMILY SSF55874 293 458 7.73E-40 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS06020 37d989a702a30abfec172dfb3762376a 459 PANTHER PTHR24423 248 459 1.2E-54 T 20-04-2016 AMC99_RS06020 37d989a702a30abfec172dfb3762376a 459 Gene3D G3DSA:3.30.565.10 309 458 5.6E-39 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS00150 155334675f643ad3e0ef28cb462c8d7b 657 PANTHER PTHR33375 2 363 2.5E-59 T 20-04-2016 AMC99_RS00150 155334675f643ad3e0ef28cb462c8d7b 657 Gene3D G3DSA:3.90.1530.10 2 105 4.7E-16 T 20-04-2016 AMC99_RS00150 155334675f643ad3e0ef28cb462c8d7b 657 SUPERFAMILY SSF110849 3 102 9.07E-15 T 20-04-2016 IPR003115 ParB/Sulfiredoxin AMC99_RS00150 155334675f643ad3e0ef28cb462c8d7b 657 PANTHER PTHR33375:SF2 2 363 2.5E-59 T 20-04-2016 AMC99_RS00150 155334675f643ad3e0ef28cb462c8d7b 657 SUPERFAMILY SSF109709 93 186 2.62E-21 T 20-04-2016 AMC99_RS00150 155334675f643ad3e0ef28cb462c8d7b 657 Pfam PF02195 ParB-like nuclease domain 4 99 3.1E-13 T 20-04-2016 IPR003115 ParB/Sulfiredoxin AMC99_RS00150 155334675f643ad3e0ef28cb462c8d7b 657 SMART SM00470 3 100 1.2E-11 T 20-04-2016 IPR003115 ParB/Sulfiredoxin AMC99_RS02115 d8829c750ef4015c755dcbeb44c748c6 258 Pfam PF00977 Histidine biosynthesis protein 6 240 1.6E-84 T 20-04-2016 IPR006062 Histidine biosynthesis GO:0000105 AMC99_RS02115 d8829c750ef4015c755dcbeb44c748c6 258 Gene3D G3DSA:3.20.20.70 6 256 2.3E-98 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS02115 d8829c750ef4015c755dcbeb44c748c6 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 5 256 1.6E-98 T 20-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 AMC99_RS02115 d8829c750ef4015c755dcbeb44c748c6 258 SUPERFAMILY SSF51366 4 256 7.85E-79 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMC99_RS02115 d8829c750ef4015c755dcbeb44c748c6 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 44.713 T 20-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 AMC99_RS02115 d8829c750ef4015c755dcbeb44c748c6 258 PANTHER PTHR21235 6 256 8.4E-107 T 20-04-2016 AMC99_RS02115 d8829c750ef4015c755dcbeb44c748c6 258 PANTHER PTHR21235:SF2 6 256 8.4E-107 T 20-04-2016 AMC99_RS02240 baf2ec8be7ddbac29ed4e6055c91f2bc 321 SUPERFAMILY SSF50891 179 283 3.65E-19 T 20-04-2016 IPR029000 Cyclophilin-like domain AMC99_RS02240 baf2ec8be7ddbac29ed4e6055c91f2bc 321 SUPERFAMILY SSF50891 80 136 3.65E-19 T 20-04-2016 IPR029000 Cyclophilin-like domain AMC99_RS02240 baf2ec8be7ddbac29ed4e6055c91f2bc 321 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 241 7.8E-16 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMC99_RS02240 baf2ec8be7ddbac29ed4e6055c91f2bc 321 Gene3D G3DSA:2.40.100.10 172 240 3.3E-13 T 20-04-2016 IPR029000 Cyclophilin-like domain AMC99_RS02240 baf2ec8be7ddbac29ed4e6055c91f2bc 321 Gene3D G3DSA:2.40.100.10 82 137 3.3E-13 T 20-04-2016 IPR029000 Cyclophilin-like domain AMC99_RS08455 6c009214d52e6f6621fd23b64b5b0b1d 368 PANTHER PTHR36836 3 368 2.1E-14 T 20-04-2016 AMC99_RS08455 6c009214d52e6f6621fd23b64b5b0b1d 368 Pfam PF04230 Polysaccharide pyruvyl transferase 18 223 8.3E-15 T 20-04-2016 IPR007345 Polysaccharide pyruvyl transferase AMC99_RS09400 4b9dbba19e5df8defbf159c2997e663c 543 PANTHER PTHR30332:SF1 288 521 6.7E-66 T 20-04-2016 AMC99_RS09400 4b9dbba19e5df8defbf159c2997e663c 543 PANTHER PTHR30332:SF1 97 264 6.7E-66 T 20-04-2016 AMC99_RS09400 4b9dbba19e5df8defbf159c2997e663c 543 PRINTS PR00811 Bacterial general secretion pathway protein D signature 438 452 4.7E-7 T 20-04-2016 IPR001775 GspD/PilQ family AMC99_RS09400 4b9dbba19e5df8defbf159c2997e663c 543 PRINTS PR00811 Bacterial general secretion pathway protein D signature 323 333 4.7E-7 T 20-04-2016 IPR001775 GspD/PilQ family AMC99_RS09400 4b9dbba19e5df8defbf159c2997e663c 543 PRINTS PR00811 Bacterial general secretion pathway protein D signature 415 433 4.7E-7 T 20-04-2016 IPR001775 GspD/PilQ family AMC99_RS09400 4b9dbba19e5df8defbf159c2997e663c 543 Pfam PF13629 Pilus formation protein N terminal region 36 105 1.4E-18 T 20-04-2016 IPR032789 Pilus formation protein, N-terminal AMC99_RS09400 4b9dbba19e5df8defbf159c2997e663c 543 Pfam PF00263 Bacterial type II and III secretion system protein 293 450 4.8E-41 T 20-04-2016 IPR004846 Type II/III secretion system GO:0009306 AMC99_RS09400 4b9dbba19e5df8defbf159c2997e663c 543 PANTHER PTHR30332 288 521 6.7E-66 T 20-04-2016 AMC99_RS09400 4b9dbba19e5df8defbf159c2997e663c 543 PANTHER PTHR30332 97 264 6.7E-66 T 20-04-2016 AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 SUPERFAMILY SSF57938 138 213 3.66E-20 T 20-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 Gene3D G3DSA:1.10.287.110 4 108 7.7E-34 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 4 374 39.854 T 20-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 SUPERFAMILY SSF49493 190 270 1.09E-21 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 SUPERFAMILY SSF49493 118 142 1.09E-21 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 Pfam PF00226 DnaJ domain 7 69 9.3E-26 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 PRINTS PR00625 DnaJ domain signature 9 27 1.1E-26 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 PRINTS PR00625 DnaJ domain signature 64 83 1.1E-26 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 PRINTS PR00625 DnaJ domain signature 44 64 1.1E-26 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 PRINTS PR00625 DnaJ domain signature 27 42 1.1E-26 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 49 68 - T 20-04-2016 IPR018253 DnaJ domain, conserved site AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 SUPERFAMILY SSF49493 262 349 7.59E-23 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 Pfam PF00684 DnaJ central domain 151 211 7.3E-13 T 20-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 7 355 2.1E-130 T 20-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 PANTHER PTHR24078:SF231 1 354 1.2E-142 T 20-04-2016 AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 Pfam PF01556 DnaJ C terminal domain 125 338 4.7E-39 T 20-04-2016 IPR002939 Chaperone DnaJ, C-terminal AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 Gene3D G3DSA:2.10.230.10 148 213 8.5E-23 T 20-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 SUPERFAMILY SSF46565 4 111 6.28E-33 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 PANTHER PTHR24078 1 354 1.2E-142 T 20-04-2016 AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 Gene3D G3DSA:2.60.260.20 260 339 1.7E-21 T 20-04-2016 AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 Gene3D G3DSA:2.60.260.20 117 147 7.3E-22 T 20-04-2016 AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 Gene3D G3DSA:2.60.260.20 217 258 7.3E-22 T 20-04-2016 AMC99_RS05625 cc29400218e691a0123accc5967c33b4 377 SMART SM00271 6 64 3.4E-28 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS09335 634f7c260f3ffdc28fdf11fdf1ca844a 211 Gene3D G3DSA:1.10.10.10 75 150 4.6E-32 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS09335 634f7c260f3ffdc28fdf11fdf1ca844a 211 SUPERFAMILY SSF46785 2 71 5.98E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS09335 634f7c260f3ffdc28fdf11fdf1ca844a 211 PANTHER PTHR34298:SF2 2 203 1.1E-50 T 20-04-2016 AMC99_RS09335 634f7c260f3ffdc28fdf11fdf1ca844a 211 PANTHER PTHR34298 2 203 1.1E-50 T 20-04-2016 AMC99_RS09335 634f7c260f3ffdc28fdf11fdf1ca844a 211 Pfam PF04079 Segregation and condensation complex subunit ScpB 3 158 6.0E-49 T 20-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMC99_RS09335 634f7c260f3ffdc28fdf11fdf1ca844a 211 PIRSF PIRSF019345 1 197 6.5E-53 T 20-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMC99_RS09335 634f7c260f3ffdc28fdf11fdf1ca844a 211 Gene3D G3DSA:1.10.10.10 2 71 2.4E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS09335 634f7c260f3ffdc28fdf11fdf1ca844a 211 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 3 161 7.0E-30 T 20-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMC99_RS09335 634f7c260f3ffdc28fdf11fdf1ca844a 211 SUPERFAMILY SSF46785 77 150 3.56E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS00580 3e52c1ff26a9cc7a3c487e333d96a061 452 Pfam PF08238 Sel1 repeat 126 144 0.36 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00580 3e52c1ff26a9cc7a3c487e333d96a061 452 Pfam PF08238 Sel1 repeat 367 394 4.3E-4 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00580 3e52c1ff26a9cc7a3c487e333d96a061 452 Pfam PF08238 Sel1 repeat 326 359 0.21 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00580 3e52c1ff26a9cc7a3c487e333d96a061 452 Pfam PF08238 Sel1 repeat 291 323 0.57 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00580 3e52c1ff26a9cc7a3c487e333d96a061 452 SMART SM00671 287 323 0.5 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00580 3e52c1ff26a9cc7a3c487e333d96a061 452 SMART SM00671 360 395 1.1E-4 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00580 3e52c1ff26a9cc7a3c487e333d96a061 452 SMART SM00671 324 359 19.0 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00580 3e52c1ff26a9cc7a3c487e333d96a061 452 SMART SM00671 109 144 130.0 T 20-04-2016 IPR006597 Sel1-like repeat AMC99_RS00580 3e52c1ff26a9cc7a3c487e333d96a061 452 Gene3D G3DSA:1.25.40.10 90 147 1.2E-29 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS00580 3e52c1ff26a9cc7a3c487e333d96a061 452 Gene3D G3DSA:1.25.40.10 258 431 1.2E-29 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS00580 3e52c1ff26a9cc7a3c487e333d96a061 452 SUPERFAMILY SSF81901 256 431 7.32E-19 T 20-04-2016 AMC99_RS00580 3e52c1ff26a9cc7a3c487e333d96a061 452 PANTHER PTHR11102 265 411 4.5E-19 T 20-04-2016 AMC99_RS00580 3e52c1ff26a9cc7a3c487e333d96a061 452 SUPERFAMILY SSF81901 92 152 7.46E-5 T 20-04-2016 AMC99_RS12115 455a6a13cf9f60649655a8c88fbac835 331 Pfam PF00294 pfkB family carbohydrate kinase 56 318 4.7E-54 T 20-04-2016 IPR011611 Carbohydrate kinase PfkB AMC99_RS12115 455a6a13cf9f60649655a8c88fbac835 331 SUPERFAMILY SSF53613 5 318 2.18E-80 T 20-04-2016 IPR029056 Ribokinase-like AMC99_RS12115 455a6a13cf9f60649655a8c88fbac835 331 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 274 287 - T 20-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMC99_RS12115 455a6a13cf9f60649655a8c88fbac835 331 Gene3D G3DSA:3.40.1190.20 3 328 2.2E-74 T 20-04-2016 IPR029056 Ribokinase-like AMC99_RS12115 455a6a13cf9f60649655a8c88fbac835 331 PANTHER PTHR10584:SF153 1 330 3.3E-99 T 20-04-2016 AMC99_RS12115 455a6a13cf9f60649655a8c88fbac835 331 PANTHER PTHR10584 1 330 3.3E-99 T 20-04-2016 AMC99_RS05150 c3f6509308f32e61440c686d821679e7 182 SUPERFAMILY SSF56925 27 182 6.28E-9 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMC99_RS05150 c3f6509308f32e61440c686d821679e7 182 Gene3D G3DSA:2.40.160.20 13 156 6.1E-10 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMC99_RS07370 d6d246cbf92e6f845a0f2d56a620af38 306 Pfam PF02517 CAAX protease self-immunity 143 229 9.6E-12 T 20-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 AMC99_RS07370 d6d246cbf92e6f845a0f2d56a620af38 306 PANTHER PTHR39430 60 287 5.1E-26 T 20-04-2016 AMC99_RS07495 a7ed13578b8bef29391bb514073fa11f 122 SUPERFAMILY SSF50193 1 122 6.28E-53 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMC99_RS07495 a7ed13578b8bef29391bb514073fa11f 122 PANTHER PTHR11761 1 122 5.4E-75 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMC99_RS07495 a7ed13578b8bef29391bb514073fa11f 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 28.628 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMC99_RS07495 a7ed13578b8bef29391bb514073fa11f 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.4E-58 T 20-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMC99_RS07495 a7ed13578b8bef29391bb514073fa11f 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 20-04-2016 IPR019972 Ribosomal protein L14P, conserved site AMC99_RS07495 a7ed13578b8bef29391bb514073fa11f 122 Gene3D G3DSA:2.40.150.20 1 122 3.2E-56 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMC99_RS07495 a7ed13578b8bef29391bb514073fa11f 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 7.5E-56 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMC99_RS07495 a7ed13578b8bef29391bb514073fa11f 122 SMART SM01374 1 122 9.4E-86 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMC99_RS10825 4ed8a4a8f90dab86cde9c7cfc3b38fdf 226 Pfam PF02592 Putative vitamin uptake transporter 52 213 2.7E-35 T 20-04-2016 IPR003744 Protein of unknown function DUF165 AMC99_RS10825 4ed8a4a8f90dab86cde9c7cfc3b38fdf 226 PANTHER PTHR34300 10 221 1.5E-26 T 20-04-2016 AMC99_RS10825 4ed8a4a8f90dab86cde9c7cfc3b38fdf 226 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 23 215 7.7E-23 T 20-04-2016 IPR003744 Protein of unknown function DUF165 AMC99_RS10825 4ed8a4a8f90dab86cde9c7cfc3b38fdf 226 PANTHER PTHR34300:SF2 10 221 1.5E-26 T 20-04-2016 AMC99_RS10270 06996504a1f84bb20a8e129337cc05e4 65 Pfam PF12728 Helix-turn-helix domain 7 52 5.7E-8 T 20-04-2016 AMC99_RS10270 06996504a1f84bb20a8e129337cc05e4 65 Gene3D G3DSA:1.10.10.10 7 56 4.1E-6 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS10270 06996504a1f84bb20a8e129337cc05e4 65 SUPERFAMILY SSF46955 7 55 3.89E-10 T 20-04-2016 IPR009061 Putative DNA-binding domain AMC99_RS02860 f700fa42cb603352d95d980216eb46b7 199 SUPERFAMILY SSF46689 5 78 7.28E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS02860 f700fa42cb603352d95d980216eb46b7 199 Gene3D G3DSA:1.10.357.10 2 188 2.8E-18 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMC99_RS02860 f700fa42cb603352d95d980216eb46b7 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 55 1.7E-7 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS02635 9c40242e625e8e0631c108461ba03a0c 90 Pfam PF01722 BolA-like protein 13 90 1.3E-23 T 20-04-2016 IPR002634 BolA protein AMC99_RS02635 9c40242e625e8e0631c108461ba03a0c 90 Gene3D G3DSA:3.30.70.1500 5 86 1.6E-23 T 20-04-2016 AMC99_RS02635 9c40242e625e8e0631c108461ba03a0c 90 PIRSF PIRSF003113 1 90 1.2E-24 T 20-04-2016 IPR002634 BolA protein AMC99_RS02635 9c40242e625e8e0631c108461ba03a0c 90 PANTHER PTHR12735:SF24 1 90 3.0E-21 T 20-04-2016 AMC99_RS02635 9c40242e625e8e0631c108461ba03a0c 90 SUPERFAMILY SSF82657 3 90 4.05E-24 T 20-04-2016 IPR002634 BolA protein AMC99_RS02635 9c40242e625e8e0631c108461ba03a0c 90 PANTHER PTHR12735 1 90 3.0E-21 T 20-04-2016 AMC99_RS13250 8772b5eccda8356412b470c8499e911f 148 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 6 138 1.7E-36 T 20-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- AMC99_RS13250 8772b5eccda8356412b470c8499e911f 148 SUPERFAMILY SSF52799 4 122 7.06E-9 T 20-04-2016 IPR029021 Protein-tyrosine phosphatase-like AMC99_RS13250 8772b5eccda8356412b470c8499e911f 148 Pfam PF04273 Putative phosphatase (DUF442) 6 112 2.8E-29 T 20-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- AMC99_RS13250 8772b5eccda8356412b470c8499e911f 148 Gene3D G3DSA:3.90.190.10 3 141 6.9E-41 T 20-04-2016 IPR029021 Protein-tyrosine phosphatase-like AMC99_RS05180 622a9599a02ed8174047121e6f14d3d3 103 SMART SM00830 18 97 1.1E-19 T 20-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMC99_RS05180 622a9599a02ed8174047121e6f14d3d3 103 Pfam PF01817 Chorismate mutase type II 18 94 1.7E-14 T 20-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMC99_RS05180 622a9599a02ed8174047121e6f14d3d3 103 Gene3D G3DSA:1.20.59.10 9 94 1.9E-14 T 20-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMC99_RS05180 622a9599a02ed8174047121e6f14d3d3 103 SUPERFAMILY SSF48600 8 95 5.04E-21 T 20-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMC99_RS05180 622a9599a02ed8174047121e6f14d3d3 103 PIRSF PIRSF029775 2 103 7.5E-35 T 20-04-2016 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00025 AMC99_RS05710 c7ae5ea56014989ed2dcf49c68d77239 620 Pfam PF00999 Sodium/hydrogen exchanger family 8 392 1.3E-52 T 20-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMC99_RS05710 c7ae5ea56014989ed2dcf49c68d77239 620 SUPERFAMILY SSF51735 418 547 6.78E-28 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS05710 c7ae5ea56014989ed2dcf49c68d77239 620 PANTHER PTHR16254:SF6 4 574 1.1E-181 T 20-04-2016 AMC99_RS05710 c7ae5ea56014989ed2dcf49c68d77239 620 Gene3D G3DSA:3.40.50.720 415 549 4.7E-28 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS05710 c7ae5ea56014989ed2dcf49c68d77239 620 Pfam PF02254 TrkA-N domain 420 533 1.0E-17 T 20-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMC99_RS05710 c7ae5ea56014989ed2dcf49c68d77239 620 PANTHER PTHR16254 4 574 1.1E-181 T 20-04-2016 AMC99_RS09610 9a000bd18f30ede75ee4c6a6ac59780f 198 SUPERFAMILY SSF159594 43 197 6.8E-24 T 20-04-2016 AMC99_RS09610 9a000bd18f30ede75ee4c6a6ac59780f 198 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 41 191 5.6E-12 T 20-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component AMC99_RS09610 9a000bd18f30ede75ee4c6a6ac59780f 198 Gene3D G3DSA:3.40.50.10610 22 197 1.9E-24 T 20-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component AMC99_RS02230 7136c3a1467198f49ff6bb78a1921860 610 Pfam PF00672 HAMP domain 214 276 4.5E-9 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMC99_RS02230 7136c3a1467198f49ff6bb78a1921860 610 SMART SM00283 336 590 2.7E-28 T 20-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMC99_RS02230 7136c3a1467198f49ff6bb78a1921860 610 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 392 589 3.2E-31 T 20-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMC99_RS02230 7136c3a1467198f49ff6bb78a1921860 610 PANTHER PTHR32089:SF56 314 593 5.8E-84 T 20-04-2016 AMC99_RS02230 7136c3a1467198f49ff6bb78a1921860 610 PANTHER PTHR32089:SF56 205 267 5.8E-84 T 20-04-2016 AMC99_RS02230 7136c3a1467198f49ff6bb78a1921860 610 SMART SM00304 232 285 0.0051 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMC99_RS02230 7136c3a1467198f49ff6bb78a1921860 610 PANTHER PTHR32089 314 593 5.8E-84 T 20-04-2016 AMC99_RS02230 7136c3a1467198f49ff6bb78a1921860 610 PANTHER PTHR32089 205 267 5.8E-84 T 20-04-2016 AMC99_RS02230 7136c3a1467198f49ff6bb78a1921860 610 Gene3D G3DSA:1.10.287.950 355 561 2.0E-40 T 20-04-2016 AMC99_RS02230 7136c3a1467198f49ff6bb78a1921860 610 SUPERFAMILY SSF58104 261 287 4.45E-53 T 20-04-2016 AMC99_RS02230 7136c3a1467198f49ff6bb78a1921860 610 SUPERFAMILY SSF58104 342 589 4.45E-53 T 20-04-2016 AMC99_RS10640 8dd7740664222391d4b4175a19f63036 252 SUPERFAMILY SSF53218 5 200 3.4E-37 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS10640 8dd7740664222391d4b4175a19f63036 252 Gene3D G3DSA:3.40.980.10 5 206 1.0E-33 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS10640 8dd7740664222391d4b4175a19f63036 252 Pfam PF00994 Probable molybdopterin binding domain 10 165 4.4E-28 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS10640 8dd7740664222391d4b4175a19f63036 252 PANTHER PTHR13939 6 234 7.8E-43 T 20-04-2016 AMC99_RS10640 8dd7740664222391d4b4175a19f63036 252 SMART SM00852 9 172 1.3E-29 T 20-04-2016 IPR001453 MoaB/Mog domain AMC99_RS05985 fdb3afa907ba3cb07be128dcb87b07ff 163 PANTHER PTHR22960 4 160 2.0E-93 T 20-04-2016 AMC99_RS05985 fdb3afa907ba3cb07be128dcb87b07ff 163 SUPERFAMILY SSF55040 15 157 2.48E-58 T 20-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 AMC99_RS05985 fdb3afa907ba3cb07be128dcb87b07ff 163 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 6 160 35.579 T 20-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 AMC99_RS05985 fdb3afa907ba3cb07be128dcb87b07ff 163 Pfam PF01967 MoaC family 19 152 7.5E-54 T 20-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 AMC99_RS05985 fdb3afa907ba3cb07be128dcb87b07ff 163 Gene3D G3DSA:3.30.70.640 7 159 4.6E-66 T 20-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 AMC99_RS05985 fdb3afa907ba3cb07be128dcb87b07ff 163 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 8 154 2.7E-63 T 20-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 AMC99_RS03460 cb0f77643af3e2c88dfaef7de4dda971 214 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 12 199 16.075 T 20-04-2016 IPR006008 Intracellular septation protein A GO:0016021 AMC99_RS03460 cb0f77643af3e2c88dfaef7de4dda971 214 PANTHER PTHR36917 9 209 3.3E-31 T 20-04-2016 AMC99_RS03460 cb0f77643af3e2c88dfaef7de4dda971 214 Pfam PF04279 Intracellular septation protein A 14 196 3.4E-46 T 20-04-2016 IPR006008 Intracellular septation protein A GO:0016021 AMC99_RS03460 cb0f77643af3e2c88dfaef7de4dda971 214 PANTHER PTHR36917:SF1 9 209 3.3E-31 T 20-04-2016 AMC99_RS03915 8831a266cab8dfca7f6fe69e66c130bd 218 Gene3D G3DSA:1.20.1050.10 94 209 1.4E-33 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS03915 8831a266cab8dfca7f6fe69e66c130bd 218 PANTHER PTHR11260 1 209 2.6E-64 T 20-04-2016 AMC99_RS03915 8831a266cab8dfca7f6fe69e66c130bd 218 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 73 7.7E-13 T 20-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_RS03915 8831a266cab8dfca7f6fe69e66c130bd 218 Gene3D G3DSA:3.40.30.10 1 93 3.2E-24 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS03915 8831a266cab8dfca7f6fe69e66c130bd 218 SUPERFAMILY SSF47616 80 210 4.93E-23 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS03915 8831a266cab8dfca7f6fe69e66c130bd 218 SUPERFAMILY SSF52833 1 84 2.07E-20 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS03915 8831a266cab8dfca7f6fe69e66c130bd 218 PANTHER PTHR11260:SF289 1 209 2.6E-64 T 20-04-2016 AMC99_RS03915 8831a266cab8dfca7f6fe69e66c130bd 218 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 209 1.9E-63 T 20-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 AMC99_RS07855 6707d7d3a755fd0d5e4a6f5878685c53 141 Gene3D G3DSA:1.10.10.10 6 84 2.5E-28 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS07855 6707d7d3a755fd0d5e4a6f5878685c53 141 Pfam PF01475 Ferric uptake regulator family 14 132 2.7E-40 T 20-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMC99_RS07855 6707d7d3a755fd0d5e4a6f5878685c53 141 SUPERFAMILY SSF46785 6 134 4.95E-38 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS07855 6707d7d3a755fd0d5e4a6f5878685c53 141 PANTHER PTHR33202 6 134 1.9E-36 T 20-04-2016 AMC99_RS07225 c4656074c0bbdb245a010dd636cb0f66 256 Gene3D G3DSA:3.40.50.720 6 237 6.2E-45 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS07225 c4656074c0bbdb245a010dd636cb0f66 256 SUPERFAMILY SSF51735 5 237 3.73E-44 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS07225 c4656074c0bbdb245a010dd636cb0f66 256 PANTHER PTHR24322 149 184 1.4E-19 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS07225 c4656074c0bbdb245a010dd636cb0f66 256 PANTHER PTHR24322 8 132 1.4E-19 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS07225 c4656074c0bbdb245a010dd636cb0f66 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 236 4.8E-32 T 20-04-2016 AMC99_RS07225 c4656074c0bbdb245a010dd636cb0f66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.1E-11 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS07225 c4656074c0bbdb245a010dd636cb0f66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.1E-11 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS07225 c4656074c0bbdb245a010dd636cb0f66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.1E-11 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS07225 c4656074c0bbdb245a010dd636cb0f66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.1E-11 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS07225 c4656074c0bbdb245a010dd636cb0f66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.1E-11 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS12005 e14237c5648f4480887a6cb3132de87b 244 Pfam PF04116 Fatty acid hydroxylase superfamily 96 230 1.3E-29 T 20-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 AMC99_RS12005 e14237c5648f4480887a6cb3132de87b 244 PANTHER PTHR11863 6 232 4.3E-38 T 20-04-2016 AMC99_RS12005 e14237c5648f4480887a6cb3132de87b 244 PANTHER PTHR11863:SF2 6 232 4.3E-38 T 20-04-2016 AMC99_RS00890 66cae9d0bfed99f34a5e1b3324fd3f77 736 SUPERFAMILY SSF52540 540 720 6.84E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00890 66cae9d0bfed99f34a5e1b3324fd3f77 736 PANTHER PTHR32309:SF13 44 736 1.9E-106 T 20-04-2016 AMC99_RS00890 66cae9d0bfed99f34a5e1b3324fd3f77 736 Pfam PF02706 Chain length determinant protein 40 202 5.1E-11 T 20-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 AMC99_RS00890 66cae9d0bfed99f34a5e1b3324fd3f77 736 Pfam PF13614 AAA domain 549 664 1.7E-7 T 20-04-2016 IPR025669 AAA domain AMC99_RS00890 66cae9d0bfed99f34a5e1b3324fd3f77 736 Gene3D G3DSA:3.40.50.300 541 714 1.0E-26 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00890 66cae9d0bfed99f34a5e1b3324fd3f77 736 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 522 723 8.0E-42 T 20-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AMC99_RS00890 66cae9d0bfed99f34a5e1b3324fd3f77 736 PANTHER PTHR32309 44 736 1.9E-106 T 20-04-2016 AMC99_RS05720 4f352a26e25923c3991ff1ae3904ec29 341 PANTHER PTHR30163:SF2 9 340 4.2E-83 T 20-04-2016 AMC99_RS05720 4f352a26e25923c3991ff1ae3904ec29 341 SUPERFAMILY SSF53955 21 340 1.17E-79 T 20-04-2016 IPR023346 Lysozyme-like domain AMC99_RS05720 4f352a26e25923c3991ff1ae3904ec29 341 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 30 340 8.4E-83 T 20-04-2016 IPR011970 Lytic murein transglycosylase AMC99_RS05720 4f352a26e25923c3991ff1ae3904ec29 341 Pfam PF13406 Transglycosylase SLT domain 31 337 1.8E-91 T 20-04-2016 IPR031304 Transglycosylase SLT domain 2 AMC99_RS05720 4f352a26e25923c3991ff1ae3904ec29 341 PANTHER PTHR30163 9 340 4.2E-83 T 20-04-2016 IPR011757 Lytic transglycosylase MltB AMC99_RS05720 4f352a26e25923c3991ff1ae3904ec29 341 Gene3D G3DSA:1.10.530.10 85 136 1.4E-51 T 20-04-2016 AMC99_RS05720 4f352a26e25923c3991ff1ae3904ec29 341 Gene3D G3DSA:1.10.530.10 216 340 1.4E-51 T 20-04-2016 AMC99_RS01950 1343b0ca5ad5551285aaca7996569019 189 Pfam PF08212 Lipocalin-like domain 40 185 3.8E-38 T 20-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AMC99_RS01950 1343b0ca5ad5551285aaca7996569019 189 PANTHER PTHR10612 5 188 3.5E-38 T 20-04-2016 AMC99_RS01950 1343b0ca5ad5551285aaca7996569019 189 SUPERFAMILY SSF50814 33 188 5.02E-39 T 20-04-2016 IPR011038 Calycin-like AMC99_RS01950 1343b0ca5ad5551285aaca7996569019 189 PIRSF PIRSF036893 2 189 3.0E-42 T 20-04-2016 IPR022271 Lipocalin, ApoD type AMC99_RS01950 1343b0ca5ad5551285aaca7996569019 189 Gene3D G3DSA:2.40.128.20 7 187 8.7E-50 T 20-04-2016 IPR012674 Calycin AMC99_RS01950 1343b0ca5ad5551285aaca7996569019 189 PRINTS PR01171 Bacterial lipocalin signature 40 54 1.2E-15 T 20-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 AMC99_RS01950 1343b0ca5ad5551285aaca7996569019 189 PRINTS PR01171 Bacterial lipocalin signature 111 125 1.2E-15 T 20-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 AMC99_RS01950 1343b0ca5ad5551285aaca7996569019 189 PRINTS PR01171 Bacterial lipocalin signature 76 85 1.2E-15 T 20-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 AMC99_RS01950 1343b0ca5ad5551285aaca7996569019 189 PRINTS PR01171 Bacterial lipocalin signature 57 73 1.2E-15 T 20-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 AMC99_RS07055 c201409640349c539808a9d3cb1dbc22 431 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 425 9.7E-92 T 20-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AMC99_RS07055 c201409640349c539808a9d3cb1dbc22 431 Gene3D G3DSA:3.40.1190.10 12 304 6.4E-83 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS07055 c201409640349c539808a9d3cb1dbc22 431 PANTHER PTHR11136 31 425 1.1E-99 T 20-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AMC99_RS07055 c201409640349c539808a9d3cb1dbc22 431 SUPERFAMILY SSF53244 306 427 9.84E-19 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS07055 c201409640349c539808a9d3cb1dbc22 431 Gene3D G3DSA:3.90.190.20 306 427 2.2E-18 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS07055 c201409640349c539808a9d3cb1dbc22 431 SUPERFAMILY SSF53623 26 303 5.49E-74 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS07055 c201409640349c539808a9d3cb1dbc22 431 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 20-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 AMC99_RS07055 c201409640349c539808a9d3cb1dbc22 431 PIRSF PIRSF001563 11 430 7.2E-90 T 20-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AMC99_RS11005 019892146b91aeddc1831a759b4cab25 310 Pfam PF02687 FtsX-like permease family 188 308 4.5E-9 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMC99_RS12560 5c9ea0fb8bf7cd30f7d5dde34f31c8b2 213 PANTHER PTHR37314 11 212 1.3E-17 T 20-04-2016 AMC99_RS12560 5c9ea0fb8bf7cd30f7d5dde34f31c8b2 213 Pfam PF06912 Protein of unknown function (DUF1275) 11 201 2.4E-28 T 20-04-2016 IPR010699 Protein of unknown function DUF1275 AMC99_RS00775 8f1442b900860aab27947aaaca8ae8f0 155 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 22 154 5.0E-27 T 20-04-2016 AMC99_RS00775 8f1442b900860aab27947aaaca8ae8f0 155 Gene3D G3DSA:3.40.30.10 85 153 2.7E-5 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS00775 8f1442b900860aab27947aaaca8ae8f0 155 PANTHER PTHR10371 18 154 3.6E-21 T 20-04-2016 AMC99_RS00775 8f1442b900860aab27947aaaca8ae8f0 155 SUPERFAMILY SSF52833 17 154 1.34E-33 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS01650 8f619a4eb0317a6f913a1470aa72fdb8 123 Pfam PF01597 Glycine cleavage H-protein 3 121 4.0E-42 T 20-04-2016 IPR002930 Glycine cleavage system H-protein AMC99_RS01650 8f619a4eb0317a6f913a1470aa72fdb8 123 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 43 72 - T 20-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMC99_RS01650 8f619a4eb0317a6f913a1470aa72fdb8 123 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 121 25.94 T 20-04-2016 IPR002930 Glycine cleavage system H-protein AMC99_RS01650 8f619a4eb0317a6f913a1470aa72fdb8 123 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 119 5.3E-45 T 20-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 AMC99_RS01650 8f619a4eb0317a6f913a1470aa72fdb8 123 PANTHER PTHR11715 3 122 5.5E-65 T 20-04-2016 IPR002930 Glycine cleavage system H-protein AMC99_RS01650 8f619a4eb0317a6f913a1470aa72fdb8 123 Gene3D G3DSA:2.40.50.100 3 122 1.1E-49 T 20-04-2016 AMC99_RS01650 8f619a4eb0317a6f913a1470aa72fdb8 123 SUPERFAMILY SSF51230 3 121 1.7E-42 T 20-04-2016 IPR011053 Single hybrid motif AMC99_RS08640 019e812058fbf80810a6aff5abc16ace 223 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 147 220 1.1E-11 T 20-04-2016 IPR006260 TonB, C-terminal GO:0006810 AMC99_RS08640 019e812058fbf80810a6aff5abc16ace 223 Gene3D G3DSA:3.30.1150.10 148 204 4.8E-8 T 20-04-2016 AMC99_RS08640 019e812058fbf80810a6aff5abc16ace 223 SUPERFAMILY SSF74653 119 203 4.12E-10 T 20-04-2016 AMC99_RS08640 019e812058fbf80810a6aff5abc16ace 223 SUPERFAMILY SSF74653 57 69 4.12E-10 T 20-04-2016 AMC99_RS08640 019e812058fbf80810a6aff5abc16ace 223 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 145 209 1.0E-10 T 20-04-2016 IPR006260 TonB, C-terminal GO:0006810 AMC99_RS10550 fa72a99fed5eea6008bb835843e81608 955 PANTHER PTHR33841:SF3 353 590 1.3E-61 T 20-04-2016 AMC99_RS10550 fa72a99fed5eea6008bb835843e81608 955 PANTHER PTHR33841:SF3 187 328 1.3E-61 T 20-04-2016 AMC99_RS10550 fa72a99fed5eea6008bb835843e81608 955 Gene3D G3DSA:3.40.50.150 367 597 2.3E-20 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10550 fa72a99fed5eea6008bb835843e81608 955 PANTHER PTHR33841 353 590 1.3E-61 T 20-04-2016 AMC99_RS10550 fa72a99fed5eea6008bb835843e81608 955 PANTHER PTHR33841 187 328 1.3E-61 T 20-04-2016 AMC99_RS10550 fa72a99fed5eea6008bb835843e81608 955 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 371 385 8.7E-5 T 20-04-2016 AMC99_RS10550 fa72a99fed5eea6008bb835843e81608 955 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 482 494 8.7E-5 T 20-04-2016 AMC99_RS10550 fa72a99fed5eea6008bb835843e81608 955 SUPERFAMILY SSF53335 367 596 2.47E-45 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10550 fa72a99fed5eea6008bb835843e81608 955 SUPERFAMILY SSF53335 164 320 2.47E-45 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS09715 6950b6595cb87f78e405f330c66ed4b9 131 SMART SM00232 2 131 8.9E-11 T 20-04-2016 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 AMC99_RS09715 6950b6595cb87f78e405f330c66ed4b9 131 PANTHER PTHR34858:SF1 2 118 1.2E-26 T 20-04-2016 AMC99_RS09715 6950b6595cb87f78e405f330c66ed4b9 131 Gene3D G3DSA:3.40.140.10 3 108 8.0E-28 T 20-04-2016 AMC99_RS09715 6950b6595cb87f78e405f330c66ed4b9 131 SUPERFAMILY SSF102712 3 108 5.36E-27 T 20-04-2016 AMC99_RS09715 6950b6595cb87f78e405f330c66ed4b9 131 Pfam PF14464 Prokaryotic homologs of the JAB domain 8 114 1.3E-25 T 20-04-2016 IPR028090 JAB domain, prokaryotic AMC99_RS09715 6950b6595cb87f78e405f330c66ed4b9 131 PANTHER PTHR34858 2 118 1.2E-26 T 20-04-2016 AMC99_RS09880 6ce670f76c1ec30f2901bf30572835d8 419 Gene3D G3DSA:3.40.50.300 239 377 6.7E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09880 6ce670f76c1ec30f2901bf30572835d8 419 Gene3D G3DSA:3.40.50.300 98 159 6.7E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09880 6ce670f76c1ec30f2901bf30572835d8 419 PANTHER PTHR36451:SF1 79 411 9.0E-41 T 20-04-2016 AMC99_RS09880 6ce670f76c1ec30f2901bf30572835d8 419 SUPERFAMILY SSF52540 229 365 6.07E-32 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09880 6ce670f76c1ec30f2901bf30572835d8 419 SUPERFAMILY SSF52540 76 148 6.07E-32 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09880 6ce670f76c1ec30f2901bf30572835d8 419 PANTHER PTHR36451 79 411 9.0E-41 T 20-04-2016 AMC99_RS09880 6ce670f76c1ec30f2901bf30572835d8 419 Pfam PF13469 Sulfotransferase family 100 354 8.7E-42 T 20-04-2016 AMC99_RS12800 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 Pfam PF01545 Cation efflux family 18 211 5.4E-30 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMC99_RS12800 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 Pfam PF16916 Dimerisation domain of Zinc Transporter 216 292 7.7E-23 T 20-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain AMC99_RS12800 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 Gene3D G3DSA:1.20.1510.10 14 211 2.6E-33 T 20-04-2016 IPR027469 Cation efflux protein transmembrane domain AMC99_RS12800 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 Gene3D G3DSA:3.30.70.1350 212 292 2.6E-26 T 20-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain AMC99_RS12800 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 SUPERFAMILY SSF161111 11 212 2.22E-45 T 20-04-2016 AMC99_RS12800 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 14 292 5.2E-60 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMC99_RS12800 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 PANTHER PTHR11562 5 301 1.2E-84 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMC99_RS12800 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 PANTHER PTHR11562:SF55 5 301 1.2E-84 T 20-04-2016 AMC99_RS12800 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 SUPERFAMILY SSF160240 215 293 7.19E-22 T 20-04-2016 AMC99_RS12905 12b32bf9bfa49eadaab521a4da0405c9 176 PANTHER PTHR33695:SF1 7 171 3.3E-39 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMC99_RS12905 12b32bf9bfa49eadaab521a4da0405c9 176 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 138 154 9.3E-16 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMC99_RS12905 12b32bf9bfa49eadaab521a4da0405c9 176 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 9.3E-16 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMC99_RS12905 12b32bf9bfa49eadaab521a4da0405c9 176 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 55 63 9.3E-16 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMC99_RS12905 12b32bf9bfa49eadaab521a4da0405c9 176 PANTHER PTHR33695 7 171 3.3E-39 T 20-04-2016 AMC99_RS12905 12b32bf9bfa49eadaab521a4da0405c9 176 TIGRFAM TIGR00077 lspA: signal peptidase II 14 163 1.4E-31 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMC99_RS12905 12b32bf9bfa49eadaab521a4da0405c9 176 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 163 15.381 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMC99_RS12905 12b32bf9bfa49eadaab521a4da0405c9 176 Pfam PF01252 Signal peptidase (SPase) II 16 158 2.3E-33 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMC99_RS00530 a54f1dbc58a1a56b462130841889c2a3 186 PANTHER PTHR13891 50 179 9.5E-12 T 20-04-2016 AMC99_RS00530 a54f1dbc58a1a56b462130841889c2a3 186 Gene3D G3DSA:1.25.40.10 63 183 4.3E-14 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS00530 a54f1dbc58a1a56b462130841889c2a3 186 PANTHER PTHR13891:SF1 50 179 9.5E-12 T 20-04-2016 AMC99_RS00530 a54f1dbc58a1a56b462130841889c2a3 186 SUPERFAMILY SSF81901 51 179 1.27E-10 T 20-04-2016 AMC99_RS13080 564b3be42eed4a83e21fd2ad3688b943 164 Pfam PF02472 Biopolymer transport protein ExbD/TolR 2 157 1.6E-15 T 20-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AMC99_RS05025 c07c0dd4d2e0e163f414247ffbbc7d5d 348 Pfam PF04909 Amidohydrolase 13 342 2.2E-30 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMC99_RS05025 c07c0dd4d2e0e163f414247ffbbc7d5d 348 SUPERFAMILY SSF51556 11 342 3.06E-38 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS05025 c07c0dd4d2e0e163f414247ffbbc7d5d 348 Gene3D G3DSA:3.20.20.140 8 343 7.1E-49 T 20-04-2016 AMC99_RS05025 c07c0dd4d2e0e163f414247ffbbc7d5d 348 PANTHER PTHR21240:SF9 1 343 8.9E-73 T 20-04-2016 AMC99_RS05025 c07c0dd4d2e0e163f414247ffbbc7d5d 348 PANTHER PTHR21240 1 343 8.9E-73 T 20-04-2016 AMC99_RS05435 d3b3bb6b4f2bcbded3971deb97432ce3 602 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 157 2.3E-10 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS05435 d3b3bb6b4f2bcbded3971deb97432ce3 602 PANTHER PTHR10909 1 478 1.6E-205 T 20-04-2016 AMC99_RS05435 d3b3bb6b4f2bcbded3971deb97432ce3 602 Gene3D G3DSA:1.20.140.10 271 460 1.9E-47 T 20-04-2016 AMC99_RS05435 d3b3bb6b4f2bcbded3971deb97432ce3 602 SUPERFAMILY SSF56645 36 292 9.95E-58 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS05435 d3b3bb6b4f2bcbded3971deb97432ce3 602 SUPERFAMILY SSF47203 288 471 1.05E-45 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS05435 d3b3bb6b4f2bcbded3971deb97432ce3 602 Gene3D G3DSA:1.10.540.10 35 159 2.6E-17 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS05435 d3b3bb6b4f2bcbded3971deb97432ce3 602 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 451 2.0E-18 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS05435 d3b3bb6b4f2bcbded3971deb97432ce3 602 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 473 594 7.8E-35 T 20-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMC99_RS05435 d3b3bb6b4f2bcbded3971deb97432ce3 602 Gene3D G3DSA:2.40.110.10 162 270 4.0E-26 T 20-04-2016 AMC99_RS05435 d3b3bb6b4f2bcbded3971deb97432ce3 602 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 33 1.6E-9 T 20-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AMC99_RS05435 d3b3bb6b4f2bcbded3971deb97432ce3 602 PANTHER PTHR10909:SF154 1 478 1.6E-205 T 20-04-2016 AMC99_RS05435 d3b3bb6b4f2bcbded3971deb97432ce3 602 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 4.6E-16 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS00305 50b5b0d5730a03bef0f3bdc19fee64e3 119 SMART SM00530 22 76 2.5E-10 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS00305 50b5b0d5730a03bef0f3bdc19fee64e3 119 Gene3D G3DSA:1.10.260.40 18 72 8.1E-14 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS00305 50b5b0d5730a03bef0f3bdc19fee64e3 119 SUPERFAMILY SSF47413 17 76 1.91E-12 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS00305 50b5b0d5730a03bef0f3bdc19fee64e3 119 Pfam PF01381 Helix-turn-helix 23 71 4.8E-10 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS09695 dea044e66cf77eb166df81f18af62d07 1123 SUPERFAMILY SSF50494 318 405 7.02E-21 T 20-04-2016 IPR009003 Peptidase S1, PA clan AMC99_RS09695 dea044e66cf77eb166df81f18af62d07 1123 SUPERFAMILY SSF50494 102 254 7.02E-21 T 20-04-2016 IPR009003 Peptidase S1, PA clan AMC99_RS09695 dea044e66cf77eb166df81f18af62d07 1123 Gene3D G3DSA:2.40.128.130 794 1123 4.6E-35 T 20-04-2016 IPR005546 Autotransporter beta-domain AMC99_RS09695 dea044e66cf77eb166df81f18af62d07 1123 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 347 358 - T 20-04-2016 IPR033116 Serine proteases, trypsin family, serine active site AMC99_RS09695 dea044e66cf77eb166df81f18af62d07 1123 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 133 138 - T 20-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AMC99_RS09695 dea044e66cf77eb166df81f18af62d07 1123 SMART SM00869 837 1112 1.6E-19 T 20-04-2016 IPR005546 Autotransporter beta-domain AMC99_RS09695 dea044e66cf77eb166df81f18af62d07 1123 SMART SM00020 71 395 4.2E-5 T 20-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMC99_RS09695 dea044e66cf77eb166df81f18af62d07 1123 Pfam PF00089 Trypsin 103 245 7.6E-7 T 20-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMC99_RS09695 dea044e66cf77eb166df81f18af62d07 1123 Pfam PF03797 Autotransporter beta-domain 839 1105 1.1E-27 T 20-04-2016 IPR005546 Autotransporter beta-domain AMC99_RS09695 dea044e66cf77eb166df81f18af62d07 1123 Gene3D G3DSA:2.40.10.10 117 224 1.9E-13 T 20-04-2016 AMC99_RS09695 dea044e66cf77eb166df81f18af62d07 1123 SUPERFAMILY SSF103515 788 805 8.5E-32 T 20-04-2016 IPR005546 Autotransporter beta-domain AMC99_RS09695 dea044e66cf77eb166df81f18af62d07 1123 SUPERFAMILY SSF103515 833 1123 8.5E-32 T 20-04-2016 IPR005546 Autotransporter beta-domain AMC99_RS01885 071496d59ae2d541bb7f12107e5b0b88 152 PANTHER PTHR12418 31 143 1.3E-48 T 20-04-2016 AMC99_RS01885 071496d59ae2d541bb7f12107e5b0b88 152 Gene3D G3DSA:3.10.129.10 14 144 9.0E-46 T 20-04-2016 IPR029069 HotDog domain AMC99_RS01885 071496d59ae2d541bb7f12107e5b0b88 152 PANTHER PTHR12418:SF33 31 143 1.3E-48 T 20-04-2016 AMC99_RS01885 071496d59ae2d541bb7f12107e5b0b88 152 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 28 141 9.9E-40 T 20-04-2016 IPR003736 Phenylacetic acid degradation-related domain AMC99_RS01885 071496d59ae2d541bb7f12107e5b0b88 152 Pfam PF03061 Thioesterase superfamily 56 134 1.1E-14 T 20-04-2016 IPR006683 Thioesterase domain AMC99_RS01885 071496d59ae2d541bb7f12107e5b0b88 152 SUPERFAMILY SSF54637 18 145 5.05E-31 T 20-04-2016 IPR029069 HotDog domain AMC99_RS07585 3e602f42d78c0889130b6e64ab3fd14e 332 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 194 293 4.0E-15 T 20-04-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted AMC99_RS07585 3e602f42d78c0889130b6e64ab3fd14e 332 PANTHER PTHR39327:SF1 190 332 9.0E-24 T 20-04-2016 AMC99_RS07585 3e602f42d78c0889130b6e64ab3fd14e 332 SUPERFAMILY SSF54001 194 309 6.87E-11 T 20-04-2016 AMC99_RS07585 3e602f42d78c0889130b6e64ab3fd14e 332 PANTHER PTHR39327 190 332 9.0E-24 T 20-04-2016 AMC99_RS13375 3f37c8d6efa5dd1b3b8c9ad8b19ae0e8 153 PANTHER PTHR11803:SF2 1 151 3.9E-47 T 20-04-2016 AMC99_RS13375 3f37c8d6efa5dd1b3b8c9ad8b19ae0e8 153 SUPERFAMILY SSF55298 1 150 5.18E-56 T 20-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMC99_RS13375 3f37c8d6efa5dd1b3b8c9ad8b19ae0e8 153 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 4 144 5.5E-38 T 20-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMC99_RS13375 3f37c8d6efa5dd1b3b8c9ad8b19ae0e8 153 PANTHER PTHR11803 1 151 3.9E-47 T 20-04-2016 IPR006175 YjgF/YER057c/UK114 family AMC99_RS13375 3f37c8d6efa5dd1b3b8c9ad8b19ae0e8 153 Gene3D G3DSA:3.30.1330.40 1 150 1.9E-64 T 20-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMC99_RS04085 3250c5bfd17a2d461c75dc1bf9563398 843 Pfam PF02687 FtsX-like permease family 724 834 5.6E-11 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMC99_RS04085 3250c5bfd17a2d461c75dc1bf9563398 843 Pfam PF02687 FtsX-like permease family 264 380 1.6E-12 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMC99_RS04085 3250c5bfd17a2d461c75dc1bf9563398 843 PANTHER PTHR30287 9 843 3.5E-102 T 20-04-2016 AMC99_RS11230 6293c4f855cea8cabf3f1c8143d03e21 237 SMART SM00478 47 205 4.4E-11 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMC99_RS11230 6293c4f855cea8cabf3f1c8143d03e21 237 PIRSF PIRSF001435 12 236 2.5E-38 T 20-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMC99_RS11230 6293c4f855cea8cabf3f1c8143d03e21 237 SUPERFAMILY SSF48150 16 229 2.83E-40 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMC99_RS11230 6293c4f855cea8cabf3f1c8143d03e21 237 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 45 179 3.7E-6 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMC99_RS11230 6293c4f855cea8cabf3f1c8143d03e21 237 Gene3D G3DSA:1.10.1670.10 139 229 2.6E-23 T 20-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMC99_RS11230 6293c4f855cea8cabf3f1c8143d03e21 237 PANTHER PTHR10359 49 228 4.6E-33 T 20-04-2016 AMC99_RS11230 6293c4f855cea8cabf3f1c8143d03e21 237 Gene3D G3DSA:1.10.340.30 35 138 3.3E-14 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMC99_RS04355 9af7a28da65a7632639c6dade86a0701 231 Gene3D G3DSA:3.40.109.10 8 228 1.2E-43 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 AMC99_RS04355 9af7a28da65a7632639c6dade86a0701 231 PANTHER PTHR23026:SF100 7 231 8.4E-57 T 20-04-2016 AMC99_RS04355 9af7a28da65a7632639c6dade86a0701 231 Pfam PF00881 Nitroreductase family 14 204 1.9E-34 T 20-04-2016 IPR029479 Nitroreductase AMC99_RS04355 9af7a28da65a7632639c6dade86a0701 231 SUPERFAMILY SSF55469 10 91 4.84E-41 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 AMC99_RS04355 9af7a28da65a7632639c6dade86a0701 231 SUPERFAMILY SSF55469 128 224 4.84E-41 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 AMC99_RS04355 9af7a28da65a7632639c6dade86a0701 231 PANTHER PTHR23026 7 231 8.4E-57 T 20-04-2016 AMC99_RS10885 c7339995022a3ff671829b19582e930e 176 Pfam PF01625 Peptide methionine sulfoxide reductase 3 155 1.3E-58 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMC99_RS10885 c7339995022a3ff671829b19582e930e 176 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 148 8.9E-56 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMC99_RS10885 c7339995022a3ff671829b19582e930e 176 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 159 34.093 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMC99_RS10885 c7339995022a3ff671829b19582e930e 176 SUPERFAMILY SSF55068 1 167 1.02E-67 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMC99_RS10885 c7339995022a3ff671829b19582e930e 176 PANTHER PTHR10173 1 155 2.6E-72 T 20-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 AMC99_RS10885 c7339995022a3ff671829b19582e930e 176 Gene3D G3DSA:3.30.1060.10 1 150 3.0E-65 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMC99_RS10885 c7339995022a3ff671829b19582e930e 176 PANTHER PTHR10173:SF34 1 155 2.6E-72 T 20-04-2016 AMC99_RS06445 af3e1be56c96c20e2b5d190e6bf0b80d 414 PANTHER PTHR30590 7 411 8.0E-72 T 20-04-2016 AMC99_RS06445 af3e1be56c96c20e2b5d190e6bf0b80d 414 PANTHER PTHR30590:SF2 7 411 8.0E-72 T 20-04-2016 AMC99_RS06445 af3e1be56c96c20e2b5d190e6bf0b80d 414 Pfam PF04235 Protein of unknown function (DUF418) 237 402 1.5E-40 T 20-04-2016 IPR007349 Domain of unknown function DUF418 AMC99_RS05890 276fbc6f2948df40f7c89009187125df 99 Pfam PF04977 Septum formation initiator 19 98 2.5E-8 T 20-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 AMC99_RS08990 bbed6d1bb1d2fbe1c60dac5b78214738 402 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 12 398 4.0E-124 T 20-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 AMC99_RS08990 bbed6d1bb1d2fbe1c60dac5b78214738 402 PIRSF PIRSF001434 1 400 1.5E-112 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMC99_RS08990 bbed6d1bb1d2fbe1c60dac5b78214738 402 PANTHER PTHR11808 11 401 1.4E-149 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMC99_RS08990 bbed6d1bb1d2fbe1c60dac5b78214738 402 PANTHER PTHR11808:SF45 11 401 1.4E-149 T 20-04-2016 AMC99_RS08990 bbed6d1bb1d2fbe1c60dac5b78214738 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 396 1.6E-96 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMC99_RS08990 bbed6d1bb1d2fbe1c60dac5b78214738 402 Gene3D G3DSA:3.90.1150.10 263 398 1.7E-36 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS08990 bbed6d1bb1d2fbe1c60dac5b78214738 402 SUPERFAMILY SSF53383 36 397 2.39E-95 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS08990 bbed6d1bb1d2fbe1c60dac5b78214738 402 Gene3D G3DSA:3.40.640.10 10 261 5.0E-69 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS12180 761475e2dc1450608c49e1935c80a102 504 Pfam PF01458 Uncharacterized protein family (UPF0051) 242 475 4.1E-68 T 20-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AMC99_RS12180 761475e2dc1450608c49e1935c80a102 504 SUPERFAMILY SSF101960 47 501 2.75E-137 T 20-04-2016 AMC99_RS12180 761475e2dc1450608c49e1935c80a102 504 PANTHER PTHR30508:SF1 7 504 4.8E-304 T 20-04-2016 AMC99_RS12180 761475e2dc1450608c49e1935c80a102 504 PANTHER PTHR30508 7 504 4.8E-304 T 20-04-2016 AMC99_RS12180 761475e2dc1450608c49e1935c80a102 504 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 26 495 1.1E-191 T 20-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 AMC99_RS04160 808854112ad215b0403d865b00610a5b 338 PANTHER PTHR30420:SF1 6 333 1.0E-81 T 20-04-2016 AMC99_RS04160 808854112ad215b0403d865b00610a5b 338 PANTHER PTHR30420 6 333 1.0E-81 T 20-04-2016 AMC99_RS04160 808854112ad215b0403d865b00610a5b 338 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 5 336 2.9E-108 T 20-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 AMC99_RS04160 808854112ad215b0403d865b00610a5b 338 SUPERFAMILY SSF55729 3 336 1.33E-120 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS04160 808854112ad215b0403d865b00610a5b 338 Gene3D G3DSA:2.40.40.20 284 336 5.7E-8 T 20-04-2016 AMC99_RS04160 808854112ad215b0403d865b00610a5b 338 Pfam PF04958 Arginine N-succinyltransferase beta subunit 3 336 3.3E-127 T 20-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 AMC99_RS11775 e6c042e2e1cbf8097403fca4f7fd343e 243 PANTHER PTHR16138 5 240 3.0E-78 T 20-04-2016 AMC99_RS11775 e6c042e2e1cbf8097403fca4f7fd343e 243 Pfam PF12697 Alpha/beta hydrolase family 27 211 1.6E-8 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS11775 e6c042e2e1cbf8097403fca4f7fd343e 243 SUPERFAMILY SSF53474 2 238 2.14E-40 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS11775 e6c042e2e1cbf8097403fca4f7fd343e 243 Gene3D G3DSA:3.40.50.1820 176 240 2.8E-31 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS11775 e6c042e2e1cbf8097403fca4f7fd343e 243 Gene3D G3DSA:3.40.50.1820 23 132 2.8E-31 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS03310 22e6337965493e05a137b673310fa0a1 381 SUPERFAMILY SSF53901 10 221 1.05E-47 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS03310 22e6337965493e05a137b673310fa0a1 381 PANTHER PTHR34069:SF1 8 33 1.0E-148 T 20-04-2016 AMC99_RS03310 22e6337965493e05a137b673310fa0a1 381 PANTHER PTHR34069:SF1 99 378 1.0E-148 T 20-04-2016 AMC99_RS03310 22e6337965493e05a137b673310fa0a1 381 PANTHER PTHR34069:SF1 58 78 1.0E-148 T 20-04-2016 AMC99_RS03310 22e6337965493e05a137b673310fa0a1 381 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 158 238 3.9E-22 T 20-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMC99_RS03310 22e6337965493e05a137b673310fa0a1 381 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 293 378 3.5E-18 T 20-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMC99_RS03310 22e6337965493e05a137b673310fa0a1 381 Gene3D G3DSA:3.40.47.10 212 378 4.8E-25 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS03310 22e6337965493e05a137b673310fa0a1 381 Gene3D G3DSA:3.40.47.10 12 211 2.6E-47 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS03310 22e6337965493e05a137b673310fa0a1 381 PANTHER PTHR34069 8 33 1.0E-148 T 20-04-2016 AMC99_RS03310 22e6337965493e05a137b673310fa0a1 381 PANTHER PTHR34069 99 378 1.0E-148 T 20-04-2016 AMC99_RS03310 22e6337965493e05a137b673310fa0a1 381 PANTHER PTHR34069 58 78 1.0E-148 T 20-04-2016 AMC99_RS03310 22e6337965493e05a137b673310fa0a1 381 SUPERFAMILY SSF53901 242 379 4.4E-27 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS11435 ec200712a15397ca1c4415f1b1bf5cd7 216 Pfam PF00849 RNA pseudouridylate synthase 12 158 1.7E-31 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS11435 ec200712a15397ca1c4415f1b1bf5cd7 216 PANTHER PTHR11079:SF73 2 211 4.6E-53 T 20-04-2016 AMC99_RS11435 ec200712a15397ca1c4415f1b1bf5cd7 216 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 20-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS11435 ec200712a15397ca1c4415f1b1bf5cd7 216 SUPERFAMILY SSF55120 2 210 6.88E-52 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS11435 ec200712a15397ca1c4415f1b1bf5cd7 216 PANTHER PTHR11079 2 211 4.6E-53 T 20-04-2016 AMC99_RS10300 468d82ded15997bd957981d8554a407f 572 Gene3D G3DSA:3.40.50.720 130 240 8.2E-6 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS00915 4da3b97d5902e3146f81bfdbfedff5a6 161 Gene3D G3DSA:3.40.50.2000 49 154 1.0E-14 T 20-04-2016 AMC99_RS00915 4da3b97d5902e3146f81bfdbfedff5a6 161 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 1 111 9.6E-9 T 20-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMC99_RS00915 4da3b97d5902e3146f81bfdbfedff5a6 161 SUPERFAMILY SSF53756 1 99 5.93E-9 T 20-04-2016 AMC99_RS04755 d2b64fee7d08bb7ecbd9cb250994fb2f 190 PANTHER PTHR23407:SF1 1 187 6.0E-29 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMC99_RS04755 d2b64fee7d08bb7ecbd9cb250994fb2f 190 PIRSF PIRSF006806 1 186 3.1E-31 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMC99_RS04755 d2b64fee7d08bb7ecbd9cb250994fb2f 190 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 4 183 5.2E-27 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMC99_RS04755 d2b64fee7d08bb7ecbd9cb250994fb2f 190 SUPERFAMILY SSF100950 4 187 1.53E-37 T 20-04-2016 AMC99_RS04755 d2b64fee7d08bb7ecbd9cb250994fb2f 190 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 4 183 3.5E-32 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMC99_RS04755 d2b64fee7d08bb7ecbd9cb250994fb2f 190 PANTHER PTHR23407 1 187 6.0E-29 T 20-04-2016 AMC99_RS04755 d2b64fee7d08bb7ecbd9cb250994fb2f 190 Gene3D G3DSA:3.40.50.10420 3 187 3.0E-37 T 20-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AMC99_RS01970 5dcfda1228214586d26324a89ce52920 148 SUPERFAMILY SSF54637 10 139 1.31E-19 T 20-04-2016 IPR029069 HotDog domain AMC99_RS01970 5dcfda1228214586d26324a89ce52920 148 Gene3D G3DSA:3.10.129.10 10 142 6.4E-26 T 20-04-2016 IPR029069 HotDog domain AMC99_RS01970 5dcfda1228214586d26324a89ce52920 148 Pfam PF14539 Domain of unknown function (DUF4442) 10 137 4.4E-7 T 20-04-2016 IPR027961 Protein of unknown function DUF4442 AMC99_RS13220 7ae6d0b15a9752687a53ccaaea5c4463 176 Pfam PF00583 Acetyltransferase (GNAT) family 60 152 1.6E-12 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS13220 7ae6d0b15a9752687a53ccaaea5c4463 176 Gene3D G3DSA:3.40.630.30 1 175 2.5E-32 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS13220 7ae6d0b15a9752687a53ccaaea5c4463 176 PANTHER PTHR23091 1 75 1.4E-16 T 20-04-2016 AMC99_RS13220 7ae6d0b15a9752687a53ccaaea5c4463 176 PANTHER PTHR23091 92 176 1.4E-16 T 20-04-2016 AMC99_RS13220 7ae6d0b15a9752687a53ccaaea5c4463 176 SUPERFAMILY SSF55729 1 175 8.95E-28 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS01050 aafdcf8b6a6769702cecf1ed02a98661 184 Pfam PF01638 HxlR-like helix-turn-helix 22 109 5.0E-19 T 20-04-2016 IPR002577 Helix-turn-helix, HxlR type AMC99_RS01050 aafdcf8b6a6769702cecf1ed02a98661 184 SMART SM00347 18 113 0.0078 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_RS01050 aafdcf8b6a6769702cecf1ed02a98661 184 SUPERFAMILY SSF46785 13 145 5.79E-33 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01050 aafdcf8b6a6769702cecf1ed02a98661 184 PANTHER PTHR33204:SF10 1 143 2.7E-35 T 20-04-2016 AMC99_RS01050 aafdcf8b6a6769702cecf1ed02a98661 184 Gene3D G3DSA:1.10.10.10 10 115 1.1E-26 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01050 aafdcf8b6a6769702cecf1ed02a98661 184 PANTHER PTHR33204 1 143 2.7E-35 T 20-04-2016 AMC99_RS03445 3fafb28827ab36d443a05c153102eb6a 214 Pfam PF13432 Tetratricopeptide repeat 92 153 7.4E-8 T 20-04-2016 AMC99_RS03445 3fafb28827ab36d443a05c153102eb6a 214 SUPERFAMILY SSF48452 65 188 6.42E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS03445 3fafb28827ab36d443a05c153102eb6a 214 Gene3D G3DSA:1.25.40.10 92 188 1.0E-12 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS05645 c11db4ea956ff9abf3aaee87975e81ac 175 PANTHER PTHR36926 1 139 3.1E-17 T 20-04-2016 AMC99_RS05645 c11db4ea956ff9abf3aaee87975e81ac 175 Pfam PF02674 Colicin V production protein 4 149 2.4E-32 T 20-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AMC99_RS05645 c11db4ea956ff9abf3aaee87975e81ac 175 PANTHER PTHR36926:SF1 1 139 3.1E-17 T 20-04-2016 AMC99_RS01380 d9f32767fe992b71ed3415dd5cb02231 188 PANTHER PTHR23091:SF258 18 186 4.6E-30 T 20-04-2016 AMC99_RS01380 d9f32767fe992b71ed3415dd5cb02231 188 Pfam PF13673 Acetyltransferase (GNAT) domain 46 167 1.7E-15 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS01380 d9f32767fe992b71ed3415dd5cb02231 188 SUPERFAMILY SSF55729 17 186 2.23E-30 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS01380 d9f32767fe992b71ed3415dd5cb02231 188 Gene3D G3DSA:3.40.630.30 16 186 1.6E-33 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS01380 d9f32767fe992b71ed3415dd5cb02231 188 PANTHER PTHR23091 18 186 4.6E-30 T 20-04-2016 AMC99_RS08935 1a139f483780b8fece3f350bed93e28f 191 Gene3D G3DSA:1.10.10.60 26 63 7.3E-4 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS09370 4f63983d0deb110387d0b1028ab07f45 326 Hamap MF_00301 Homoserine kinase [thrB]. 1 326 119.448 T 20-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 AMC99_RS09370 4f63983d0deb110387d0b1028ab07f45 326 Pfam PF01636 Phosphotransferase enzyme family 28 261 1.6E-33 T 20-04-2016 IPR002575 Aminoglycoside phosphotransferase AMC99_RS09370 4f63983d0deb110387d0b1028ab07f45 326 PANTHER PTHR21064 12 295 7.0E-38 T 20-04-2016 AMC99_RS09370 4f63983d0deb110387d0b1028ab07f45 326 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 312 1.3E-97 T 20-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 AMC99_RS09370 4f63983d0deb110387d0b1028ab07f45 326 Gene3D G3DSA:3.30.200.20 1 108 1.0E-32 T 20-04-2016 AMC99_RS09370 4f63983d0deb110387d0b1028ab07f45 326 SUPERFAMILY SSF56112 6 316 1.25E-71 T 20-04-2016 IPR011009 Protein kinase-like domain AMC99_RS09370 4f63983d0deb110387d0b1028ab07f45 326 Gene3D G3DSA:3.90.1200.10 111 318 9.8E-57 T 20-04-2016 AMC99_RS05805 18e83acd1e728791907285f35137eb4f 169 SUPERFAMILY SSF142433 9 168 9.68E-52 T 20-04-2016 IPR008136 CinA, C-terminal AMC99_RS05805 18e83acd1e728791907285f35137eb4f 169 Gene3D G3DSA:3.90.950.20 8 168 3.4E-53 T 20-04-2016 IPR008136 CinA, C-terminal AMC99_RS05805 18e83acd1e728791907285f35137eb4f 169 Pfam PF02464 Competence-damaged protein 15 168 8.9E-54 T 20-04-2016 IPR008136 CinA, C-terminal AMC99_RS05805 18e83acd1e728791907285f35137eb4f 169 PANTHER PTHR13939 7 168 6.1E-56 T 20-04-2016 AMC99_RS05805 18e83acd1e728791907285f35137eb4f 169 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 21 167 2.0E-43 T 20-04-2016 IPR008136 CinA, C-terminal AMC99_RS03730 f1c672968e53993761059a86a877c366 67 Pfam PF11127 Protein of unknown function (DUF2892) 1 66 5.4E-19 T 20-04-2016 IPR021309 Protein of unknown function DUF2892 AMC99_RS00490 75fdfc8c5e050d0a5e644fc6b2acd662 156 SUPERFAMILY SSF52833 31 108 3.08E-6 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS00490 75fdfc8c5e050d0a5e644fc6b2acd662 156 Pfam PF04214 Protein of unknown function, DUF 59 128 9.9E-32 T 20-04-2016 IPR007332 Protein of unknown function DUF411 AMC99_RS06810 287e2cbeba4b215d0c1aff45b8da955d 479 Pfam PF01048 Phosphorylase superfamily 267 429 5.3E-19 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMC99_RS06810 287e2cbeba4b215d0c1aff45b8da955d 479 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 7 479 6.4E-205 T 20-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMC99_RS06810 287e2cbeba4b215d0c1aff45b8da955d 479 Hamap MF_01932 AMP nucleosidase [amn]. 1 479 55.584 T 20-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMC99_RS06810 287e2cbeba4b215d0c1aff45b8da955d 479 Gene3D G3DSA:3.30.1730.10 2 166 2.7E-51 T 20-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMC99_RS06810 287e2cbeba4b215d0c1aff45b8da955d 479 PANTHER PTHR21234:SF11 244 479 8.4E-121 T 20-04-2016 AMC99_RS06810 287e2cbeba4b215d0c1aff45b8da955d 479 PANTHER PTHR21234:SF11 177 222 8.4E-121 T 20-04-2016 AMC99_RS06810 287e2cbeba4b215d0c1aff45b8da955d 479 PANTHER PTHR21234 244 479 8.4E-121 T 20-04-2016 IPR018017 Nucleoside phosphorylase AMC99_RS06810 287e2cbeba4b215d0c1aff45b8da955d 479 PANTHER PTHR21234 177 222 8.4E-121 T 20-04-2016 IPR018017 Nucleoside phosphorylase AMC99_RS06810 287e2cbeba4b215d0c1aff45b8da955d 479 SUPERFAMILY SSF53167 5 479 1.14E-151 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMC99_RS06810 287e2cbeba4b215d0c1aff45b8da955d 479 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 7 163 1.9E-48 T 20-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMC99_RS06810 287e2cbeba4b215d0c1aff45b8da955d 479 Gene3D G3DSA:3.40.50.1580 172 461 1.5E-109 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMC99_RS05120 d28c90519c410abc3b6f9b52e2f12812 299 SUPERFAMILY SSF48576 8 291 4.11E-82 T 20-04-2016 IPR008949 Isoprenoid synthase domain AMC99_RS05120 d28c90519c410abc3b6f9b52e2f12812 299 Gene3D G3DSA:1.10.600.10 8 298 1.2E-87 T 20-04-2016 IPR008949 Isoprenoid synthase domain AMC99_RS05120 d28c90519c410abc3b6f9b52e2f12812 299 PANTHER PTHR12001:SF23 4 273 4.1E-92 T 20-04-2016 AMC99_RS05120 d28c90519c410abc3b6f9b52e2f12812 299 PANTHER PTHR12001 4 273 4.1E-92 T 20-04-2016 IPR017446 Polyprenyl synthetase-related AMC99_RS05120 d28c90519c410abc3b6f9b52e2f12812 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 218 230 - T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 AMC99_RS05120 d28c90519c410abc3b6f9b52e2f12812 299 Pfam PF00348 Polyprenyl synthetase 36 275 4.3E-54 T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 AMC99_RS01325 2ef962f4e464a74bded1d190d8ac3977 236 PANTHER PTHR10869 55 231 2.9E-36 T 20-04-2016 AMC99_RS01325 2ef962f4e464a74bded1d190d8ac3977 236 SMART SM00702 47 226 5.7E-29 T 20-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AMC99_RS01325 2ef962f4e464a74bded1d190d8ac3977 236 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 122 226 1.3E-15 T 20-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMC99_RS11225 5143edd91013234eae49d24454f8d309 226 Gene3D G3DSA:1.10.1670.10 131 216 2.2E-31 T 20-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMC99_RS11225 5143edd91013234eae49d24454f8d309 226 Pfam PF00633 Helix-hairpin-helix motif 108 136 4.9E-6 T 20-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 AMC99_RS11225 5143edd91013234eae49d24454f8d309 226 SMART SM00478 46 193 5.5E-41 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMC99_RS11225 5143edd91013234eae49d24454f8d309 226 PANTHER PTHR10359 35 216 6.9E-64 T 20-04-2016 AMC99_RS11225 5143edd91013234eae49d24454f8d309 226 PIRSF PIRSF001435 9 219 1.4E-48 T 20-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMC99_RS11225 5143edd91013234eae49d24454f8d309 226 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 42 172 1.3E-18 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMC99_RS11225 5143edd91013234eae49d24454f8d309 226 Gene3D G3DSA:1.10.340.30 35 130 1.2E-31 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMC99_RS11225 5143edd91013234eae49d24454f8d309 226 SUPERFAMILY SSF48150 30 217 1.24E-59 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMC99_RS11225 5143edd91013234eae49d24454f8d309 226 SMART SM00525 194 214 3.6E-4 T 20-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 AMC99_RS11945 542b6e6ba158716957ca26603dd13ac1 431 SUPERFAMILY SSF103473 28 429 4.97E-38 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS11945 542b6e6ba158716957ca26603dd13ac1 431 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 109 421 5.2E-82 T 20-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 AMC99_RS11945 542b6e6ba158716957ca26603dd13ac1 431 PANTHER PTHR23514:SF7 203 426 3.9E-81 T 20-04-2016 AMC99_RS11945 542b6e6ba158716957ca26603dd13ac1 431 PANTHER PTHR23514:SF7 31 187 3.9E-81 T 20-04-2016 AMC99_RS11945 542b6e6ba158716957ca26603dd13ac1 431 PANTHER PTHR23514 203 426 3.9E-81 T 20-04-2016 AMC99_RS11945 542b6e6ba158716957ca26603dd13ac1 431 PANTHER PTHR23514 31 187 3.9E-81 T 20-04-2016 AMC99_RS11945 542b6e6ba158716957ca26603dd13ac1 431 Gene3D G3DSA:1.20.1250.20 31 236 8.7E-14 T 20-04-2016 AMC99_RS11945 542b6e6ba158716957ca26603dd13ac1 431 Gene3D G3DSA:1.20.1250.20 249 428 5.1E-9 T 20-04-2016 AMC99_RS11945 542b6e6ba158716957ca26603dd13ac1 431 Pfam PF07690 Major Facilitator Superfamily 33 391 2.3E-18 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS12350 1688cd55a9322758efbe3fee398a3165 111 Pfam PF07372 Protein of unknown function (DUF1491) 5 106 3.7E-27 T 20-04-2016 IPR009964 Protein of unknown function DUF1491 AMC99_RS13485 71425985b4b67a9c8121057fce8a4107 380 Pfam PF00266 Aminotransferase class-V 50 349 9.9E-30 T 20-04-2016 IPR000192 Aminotransferase class V domain AMC99_RS13485 71425985b4b67a9c8121057fce8a4107 380 PANTHER PTHR11601 6 376 4.7E-69 T 20-04-2016 AMC99_RS13485 71425985b4b67a9c8121057fce8a4107 380 PANTHER PTHR11601:SF31 6 376 4.7E-69 T 20-04-2016 AMC99_RS13485 71425985b4b67a9c8121057fce8a4107 380 Gene3D G3DSA:3.90.1150.10 277 377 5.8E-5 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMC99_RS13485 71425985b4b67a9c8121057fce8a4107 380 Gene3D G3DSA:3.40.640.10 54 276 7.2E-48 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMC99_RS13485 71425985b4b67a9c8121057fce8a4107 380 SUPERFAMILY SSF53383 2 379 3.1E-65 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_RS00615 f3af93ce0644021989af46fcfeab8f62 92 Gene3D G3DSA:2.60.120.10 4 92 8.3E-23 T 20-04-2016 IPR014710 RmlC-like jelly roll fold AMC99_RS00615 f3af93ce0644021989af46fcfeab8f62 92 Pfam PF09313 Domain of unknown function (DUF1971) 15 88 2.8E-19 T 20-04-2016 IPR015392 Domain of unknown function DUF1971 AMC99_RS00615 f3af93ce0644021989af46fcfeab8f62 92 SUPERFAMILY SSF51197 5 92 5.49E-23 T 20-04-2016 AMC99_RS08440 18644663f503b992a32da2a41811c3ab 336 Pfam PF00535 Glycosyl transferase family 2 8 168 8.6E-26 T 20-04-2016 IPR001173 Glycosyltransferase 2-like AMC99_RS08440 18644663f503b992a32da2a41811c3ab 336 Gene3D G3DSA:3.90.550.10 6 181 8.3E-19 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS08440 18644663f503b992a32da2a41811c3ab 336 PANTHER PTHR10859:SF94 3 301 1.3E-75 T 20-04-2016 AMC99_RS08440 18644663f503b992a32da2a41811c3ab 336 SUPERFAMILY SSF53448 2 237 6.14E-36 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS08440 18644663f503b992a32da2a41811c3ab 336 PANTHER PTHR10859 3 301 1.3E-75 T 20-04-2016 AMC99_RS13115 301ff4d6de694303170006163218af0f 333 PANTHER PTHR30447:SF0 9 331 2.0E-146 T 20-04-2016 AMC99_RS13115 301ff4d6de694303170006163218af0f 333 Gene3D G3DSA:3.30.540.10 16 190 6.2E-62 T 20-04-2016 AMC99_RS13115 301ff4d6de694303170006163218af0f 333 Gene3D G3DSA:3.30.540.10 191 331 1.3E-35 T 20-04-2016 AMC99_RS13115 301ff4d6de694303170006163218af0f 333 SUPERFAMILY SSF56655 16 331 6.71E-100 T 20-04-2016 AMC99_RS13115 301ff4d6de694303170006163218af0f 333 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 17 331 7.1E-104 T 20-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AMC99_RS13115 301ff4d6de694303170006163218af0f 333 PIRSF PIRSF004532 16 333 1.5E-132 T 20-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AMC99_RS13115 301ff4d6de694303170006163218af0f 333 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 20 330 2.1E-133 T 20-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AMC99_RS13115 301ff4d6de694303170006163218af0f 333 PANTHER PTHR30447 9 331 2.0E-146 T 20-04-2016 AMC99_RS03905 65882c36566b4203d6a39ce9e972fb25 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 4 278 1.4E-129 T 20-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 AMC99_RS03905 65882c36566b4203d6a39ce9e972fb25 280 Gene3D G3DSA:3.40.50.1820 3 279 3.8E-81 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS03905 65882c36566b4203d6a39ce9e972fb25 280 SUPERFAMILY SSF53474 4 279 2.22E-88 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS03905 65882c36566b4203d6a39ce9e972fb25 280 PANTHER PTHR10061 2 280 9.3E-165 T 20-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 AMC99_RS03905 65882c36566b4203d6a39ce9e972fb25 280 Pfam PF00756 Putative esterase 23 271 5.4E-59 T 20-04-2016 IPR000801 Putative esterase AMC99_RS07770 91699387972c4f8e31b5814c89cd0fe7 313 PANTHER PTHR22778:SF12 9 295 8.7E-101 T 20-04-2016 AMC99_RS07770 91699387972c4f8e31b5814c89cd0fe7 313 SMART SM00450 116 219 7.4E-18 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS07770 91699387972c4f8e31b5814c89cd0fe7 313 Pfam PF00581 Rhodanese-like domain 122 215 1.6E-7 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS07770 91699387972c4f8e31b5814c89cd0fe7 313 PANTHER PTHR22778 9 295 8.7E-101 T 20-04-2016 AMC99_RS07770 91699387972c4f8e31b5814c89cd0fe7 313 SUPERFAMILY SSF52821 93 230 2.61E-29 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS07770 91699387972c4f8e31b5814c89cd0fe7 313 Hamap MF_00469 UPF0176 protein YceA [yceA]. 5 259 44.51 T 20-04-2016 IPR020936 Uncharacterised protein family UPF0176 AMC99_RS07770 91699387972c4f8e31b5814c89cd0fe7 313 Gene3D G3DSA:3.40.250.10 107 231 6.8E-42 T 20-04-2016 IPR001763 Rhodanese-like domain AMC99_RS01915 73be1d4c0152e169ef30154a8d5963ce 599 PANTHER PTHR23023 310 563 2.5E-186 T 20-04-2016 AMC99_RS01915 73be1d4c0152e169ef30154a8d5963ce 599 PANTHER PTHR23023 59 280 2.5E-186 T 20-04-2016 AMC99_RS01915 73be1d4c0152e169ef30154a8d5963ce 599 PANTHER PTHR23023:SF29 310 563 2.5E-186 T 20-04-2016 AMC99_RS01915 73be1d4c0152e169ef30154a8d5963ce 599 PANTHER PTHR23023:SF29 59 280 2.5E-186 T 20-04-2016 AMC99_RS01915 73be1d4c0152e169ef30154a8d5963ce 599 Gene3D G3DSA:3.50.50.60 382 455 4.1E-7 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01915 73be1d4c0152e169ef30154a8d5963ce 599 Gene3D G3DSA:3.50.50.60 246 288 4.1E-7 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01915 73be1d4c0152e169ef30154a8d5963ce 599 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 67 273 1.2E-9 T 20-04-2016 AMC99_RS01915 73be1d4c0152e169ef30154a8d5963ce 599 Gene3D G3DSA:3.50.50.60 48 245 7.5E-57 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01915 73be1d4c0152e169ef30154a8d5963ce 599 Gene3D G3DSA:3.50.50.60 481 572 7.5E-57 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01915 73be1d4c0152e169ef30154a8d5963ce 599 SUPERFAMILY SSF51905 392 491 3.76E-42 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS01915 73be1d4c0152e169ef30154a8d5963ce 599 SUPERFAMILY SSF51905 67 272 3.76E-42 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS00260 ded37cf0fe710ff76785dbf641a393e3 211 ProSitePatterns PS00501 Signal peptidases I serine active site. 127 134 - T 20-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 AMC99_RS00260 ded37cf0fe710ff76785dbf641a393e3 211 Gene3D G3DSA:2.10.109.10 78 210 6.3E-21 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMC99_RS00260 ded37cf0fe710ff76785dbf641a393e3 211 Pfam PF00717 Peptidase S24-like 124 189 6.5E-10 T 20-04-2016 IPR019759 Peptidase S24/S26A/S26B AMC99_RS00260 ded37cf0fe710ff76785dbf641a393e3 211 SUPERFAMILY SSF51306 76 209 3.4E-21 T 20-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AMC99_RS00260 ded37cf0fe710ff76785dbf641a393e3 211 PANTHER PTHR40661 71 209 6.0E-15 T 20-04-2016 AMC99_RS09525 a88e439ee4c7457e8a3abc632a585b07 342 SMART SM00283 83 337 1.3E-28 T 20-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMC99_RS09525 a88e439ee4c7457e8a3abc632a585b07 342 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 181 208 6.3E-15 T 20-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMC99_RS09525 a88e439ee4c7457e8a3abc632a585b07 342 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 210 239 6.3E-15 T 20-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMC99_RS09525 a88e439ee4c7457e8a3abc632a585b07 342 PANTHER PTHR32089 57 340 1.9E-34 T 20-04-2016 AMC99_RS09525 a88e439ee4c7457e8a3abc632a585b07 342 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 156 336 1.4E-32 T 20-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMC99_RS09525 a88e439ee4c7457e8a3abc632a585b07 342 SUPERFAMILY SSF58104 89 336 3.66E-41 T 20-04-2016 AMC99_RS09525 a88e439ee4c7457e8a3abc632a585b07 342 Gene3D G3DSA:1.10.287.950 86 306 3.7E-37 T 20-04-2016 AMC99_RS06795 515a7fd32c8c7bc6a9ab954e646261d2 74 Pfam PF01084 Ribosomal protein S18 20 69 2.2E-25 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06795 515a7fd32c8c7bc6a9ab954e646261d2 74 Gene3D G3DSA:4.10.640.10 9 74 5.3E-31 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06795 515a7fd32c8c7bc6a9ab954e646261d2 74 TIGRFAM TIGR00165 S18: ribosomal protein bS18 5 73 2.9E-29 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06795 515a7fd32c8c7bc6a9ab954e646261d2 74 PANTHER PTHR13479 1 74 3.6E-27 T 20-04-2016 AMC99_RS06795 515a7fd32c8c7bc6a9ab954e646261d2 74 PRINTS PR00974 Ribosomal protein S18 family signature 29 39 3.9E-17 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06795 515a7fd32c8c7bc6a9ab954e646261d2 74 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 3.9E-17 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06795 515a7fd32c8c7bc6a9ab954e646261d2 74 PRINTS PR00974 Ribosomal protein S18 family signature 47 61 3.9E-17 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06795 515a7fd32c8c7bc6a9ab954e646261d2 74 PRINTS PR00974 Ribosomal protein S18 family signature 39 46 3.9E-17 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06795 515a7fd32c8c7bc6a9ab954e646261d2 74 ProSitePatterns PS00057 Ribosomal protein S18 signature. 22 45 - T 20-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06795 515a7fd32c8c7bc6a9ab954e646261d2 74 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 22 74 3.0E-22 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06795 515a7fd32c8c7bc6a9ab954e646261d2 74 SUPERFAMILY SSF46911 3 74 3.14E-27 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06795 515a7fd32c8c7bc6a9ab954e646261d2 74 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 3 74 21.164 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS05905 d42bf626eef7622a9fdf0da2a4b4cf19 400 PANTHER PTHR23501:SF79 21 400 1.7E-49 T 20-04-2016 AMC99_RS05905 d42bf626eef7622a9fdf0da2a4b4cf19 400 Pfam PF07690 Major Facilitator Superfamily 28 324 1.4E-29 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS05905 d42bf626eef7622a9fdf0da2a4b4cf19 400 PANTHER PTHR23501 21 400 1.7E-49 T 20-04-2016 AMC99_RS05905 d42bf626eef7622a9fdf0da2a4b4cf19 400 Gene3D G3DSA:1.20.1250.20 32 200 4.7E-20 T 20-04-2016 AMC99_RS05905 d42bf626eef7622a9fdf0da2a4b4cf19 400 Gene3D G3DSA:1.20.1250.20 217 397 3.4E-9 T 20-04-2016 AMC99_RS05905 d42bf626eef7622a9fdf0da2a4b4cf19 400 SUPERFAMILY SSF103473 20 397 3.4E-42 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS01565 ae5ad837f92dd4489776eb512247ae2e 263 Pfam PF09361 Phasin protein 155 252 1.2E-18 T 20-04-2016 IPR018968 Phasin AMC99_RS01565 ae5ad837f92dd4489776eb512247ae2e 263 TIGRFAM TIGR01841 phasin: phasin family protein 174 259 5.4E-12 T 20-04-2016 IPR010127 Phasin, subfamily 1 AMC99_RS02760 3b51f7293aa1c04d5a82e1d6522a76fa 305 PANTHER PTHR11048:SF3 6 296 1.8E-66 T 20-04-2016 AMC99_RS02760 3b51f7293aa1c04d5a82e1d6522a76fa 305 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 15 295 7.6E-94 T 20-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 AMC99_RS02760 3b51f7293aa1c04d5a82e1d6522a76fa 305 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 12 297 19.407 T 20-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 AMC99_RS02760 3b51f7293aa1c04d5a82e1d6522a76fa 305 PANTHER PTHR11048 6 296 1.8E-66 T 20-04-2016 AMC99_RS02760 3b51f7293aa1c04d5a82e1d6522a76fa 305 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 66 88 - T 20-04-2016 IPR030470 UbiA prenyltransferase conserved site AMC99_RS02760 3b51f7293aa1c04d5a82e1d6522a76fa 305 Pfam PF01040 UbiA prenyltransferase family 28 262 5.1E-54 T 20-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AMC99_RS02980 6997f6ebe64ec0f95f0de34f2fcc0a25 149 PANTHER PTHR30154:SF28 1 149 1.0E-64 T 20-04-2016 AMC99_RS02980 6997f6ebe64ec0f95f0de34f2fcc0a25 149 Gene3D G3DSA:1.10.10.10 2 53 4.8E-26 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS02980 6997f6ebe64ec0f95f0de34f2fcc0a25 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 20-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMC99_RS02980 6997f6ebe64ec0f95f0de34f2fcc0a25 149 Pfam PF01037 Lrp/AsnC ligand binding domain 67 139 2.0E-21 T 20-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMC99_RS02980 6997f6ebe64ec0f95f0de34f2fcc0a25 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 1.7E-21 T 20-04-2016 AMC99_RS02980 6997f6ebe64ec0f95f0de34f2fcc0a25 149 SUPERFAMILY SSF46785 1 87 1.46E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS02980 6997f6ebe64ec0f95f0de34f2fcc0a25 149 SUPERFAMILY SSF54909 61 148 5.09E-21 T 20-04-2016 IPR011008 Dimeric alpha-beta barrel AMC99_RS02980 6997f6ebe64ec0f95f0de34f2fcc0a25 149 PANTHER PTHR30154 1 149 1.0E-64 T 20-04-2016 AMC99_RS02980 6997f6ebe64ec0f95f0de34f2fcc0a25 149 SMART SM00344 1 110 1.0E-49 T 20-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMC99_RS02980 6997f6ebe64ec0f95f0de34f2fcc0a25 149 Gene3D G3DSA:3.30.70.920 54 138 2.2E-28 T 20-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMC99_RS02980 6997f6ebe64ec0f95f0de34f2fcc0a25 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.1E-17 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMC99_RS02980 6997f6ebe64ec0f95f0de34f2fcc0a25 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.1E-17 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMC99_RS02980 6997f6ebe64ec0f95f0de34f2fcc0a25 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.1E-17 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMC99_RS01965 583cf8d895eb0c77560290d3a9e5a187 283 SUPERFAMILY SSF53213 3 256 1.44E-89 T 20-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AMC99_RS01965 583cf8d895eb0c77560290d3a9e5a187 283 Gene3D G3DSA:3.40.830.10 1 256 5.0E-93 T 20-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AMC99_RS01965 583cf8d895eb0c77560290d3a9e5a187 283 PIRSF PIRSF006157 1 258 1.4E-86 T 20-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 AMC99_RS01965 583cf8d895eb0c77560290d3a9e5a187 283 PANTHER PTHR30096 1 260 5.1E-99 T 20-04-2016 AMC99_RS01965 583cf8d895eb0c77560290d3a9e5a187 283 PANTHER PTHR30096:SF0 1 260 5.1E-99 T 20-04-2016 AMC99_RS01965 583cf8d895eb0c77560290d3a9e5a187 283 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 21 254 4.1E-35 T 20-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AMC99_RS09860 7455fead4571b73b6252acf53a0284aa 248 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 202 224 - T 20-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMC99_RS09860 7455fead4571b73b6252acf53a0284aa 248 PIRSF PIRSF000193 13 248 3.2E-46 T 20-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMC99_RS09860 7455fead4571b73b6252acf53a0284aa 248 SUPERFAMILY SSF51735 1 138 1.28E-18 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09860 7455fead4571b73b6252acf53a0284aa 248 PANTHER PTHR11645 45 247 4.5E-64 T 20-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMC99_RS09860 7455fead4571b73b6252acf53a0284aa 248 PANTHER PTHR11645:SF0 45 247 4.5E-64 T 20-04-2016 AMC99_RS09860 7455fead4571b73b6252acf53a0284aa 248 Gene3D G3DSA:3.40.50.720 1 138 1.3E-26 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09860 7455fead4571b73b6252acf53a0284aa 248 SUPERFAMILY SSF48179 141 247 3.06E-25 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMC99_RS09860 7455fead4571b73b6252acf53a0284aa 248 Gene3D G3DSA:1.10.3730.10 141 247 6.8E-26 T 20-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMC99_RS09860 7455fead4571b73b6252acf53a0284aa 248 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 142 247 3.6E-25 T 20-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMC99_RS09860 7455fead4571b73b6252acf53a0284aa 248 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 247 19.589 T 20-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMC99_RS01535 a7815acf5e93e74a704b773d45865293 387 PANTHER PTHR41368 5 386 1.1E-88 T 20-04-2016 AMC99_RS01535 a7815acf5e93e74a704b773d45865293 387 SUPERFAMILY SSF55729 148 364 6.14E-18 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS01535 a7815acf5e93e74a704b773d45865293 387 SUPERFAMILY SSF55729 37 120 6.14E-18 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS07920 b32c7049e947171860ba0e878be02366 130 PIRSF PIRSF032025 1 130 1.5E-30 T 20-04-2016 IPR008320 Uncharacterised conserved protein UCP032025 AMC99_RS07920 b32c7049e947171860ba0e878be02366 130 Pfam PF07370 Protein of unknown function (DUF1489) 5 130 1.8E-38 T 20-04-2016 IPR008320 Uncharacterised conserved protein UCP032025 AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.0E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.0E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.0E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.0E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.0E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 Gene3D G3DSA:3.40.50.720 10 241 1.9E-57 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 PANTHER PTHR24322 155 186 6.4E-41 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 PANTHER PTHR24322 15 139 6.4E-41 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 213 0.0068 T 20-04-2016 AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 SUPERFAMILY SSF51735 6 239 2.44E-56 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 8.3E-6 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 8.3E-6 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 8.3E-6 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 Pfam PF00106 short chain dehydrogenase 11 196 3.8E-45 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 PANTHER PTHR24322:SF631 155 186 6.4E-41 T 20-04-2016 AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 PANTHER PTHR24322:SF631 15 139 6.4E-41 T 20-04-2016 AMC99_RS02625 53c0f250fb302262c557b6988fc175f0 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS04625 018d7b16214a1fe4d685724d6440c6c2 1006 SUPERFAMILY SSF52540 351 697 2.83E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04625 018d7b16214a1fe4d685724d6440c6c2 1006 SUPERFAMILY SSF52980 734 889 9.65E-7 T 20-04-2016 IPR011335 Restriction endonuclease type II-like AMC99_RS04625 018d7b16214a1fe4d685724d6440c6c2 1006 Gene3D G3DSA:3.40.50.300 585 619 8.0E-6 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04625 018d7b16214a1fe4d685724d6440c6c2 1006 Gene3D G3DSA:3.40.50.300 339 424 8.0E-6 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04625 018d7b16214a1fe4d685724d6440c6c2 1006 Pfam PF12705 PD-(D/E)XK nuclease superfamily 729 960 3.7E-21 T 20-04-2016 AMC99_RS10075 d4e86e631d9d02636d0ce3ab64aee0cc 451 Pfam PF01554 MatE 247 407 2.8E-23 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMC99_RS10075 d4e86e631d9d02636d0ce3ab64aee0cc 451 Pfam PF01554 MatE 22 181 1.8E-29 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMC99_RS10075 d4e86e631d9d02636d0ce3ab64aee0cc 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 414 1.4E-63 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMC99_RS10075 d4e86e631d9d02636d0ce3ab64aee0cc 451 PANTHER PTHR11206 3 444 1.5E-86 T 20-04-2016 AMC99_RS10075 d4e86e631d9d02636d0ce3ab64aee0cc 451 PANTHER PTHR11206:SF132 3 444 1.5E-86 T 20-04-2016 AMC99_RS10075 d4e86e631d9d02636d0ce3ab64aee0cc 451 PIRSF PIRSF006603 1 447 4.6E-94 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMC99_RS12305 95f2e6e19270d5b3cc8a80a8c524611f 195 SUPERFAMILY SSF53335 7 156 5.12E-17 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS12305 95f2e6e19270d5b3cc8a80a8c524611f 195 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 11 104 5.8E-11 T 20-04-2016 AMC99_RS12305 95f2e6e19270d5b3cc8a80a8c524611f 195 Gene3D G3DSA:3.40.50.150 9 120 1.8E-17 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS12305 95f2e6e19270d5b3cc8a80a8c524611f 195 Gene3D G3DSA:3.40.50.150 121 184 4.5E-4 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 SUPERFAMILY SSF46626 603 694 1.17E-14 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 Pfam PF13360 PQQ-like domain 86 220 3.8E-16 T 20-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 Gene3D G3DSA:1.10.760.10 604 695 5.0E-16 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 PANTHER PTHR32303 43 362 2.6E-87 T 20-04-2016 AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 PANTHER PTHR32303 393 566 2.6E-87 T 20-04-2016 AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 Pfam PF01011 PQQ enzyme repeat 294 323 7.7E-6 T 20-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 Pfam PF01011 PQQ enzyme repeat 505 541 2.9E-5 T 20-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 39 559 1.0E-188 T 20-04-2016 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 PANTHER PTHR32303:SF2 43 362 2.6E-87 T 20-04-2016 AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 PANTHER PTHR32303:SF2 393 566 2.6E-87 T 20-04-2016 AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 SUPERFAMILY SSF50998 38 617 2.09E-166 T 20-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 614 688 4.5E-10 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 SMART SM00564 499 531 0.21 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 SMART SM00564 88 120 1.6E-4 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 SMART SM00564 262 313 0.56 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 SMART SM00564 140 171 0.0018 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 SMART SM00564 184 222 0.0091 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_RS00095 c6527c45953ac95fe4a0de8ebd428c75 701 Gene3D G3DSA:2.140.10.10 37 590 2.5E-146 T 20-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AMC99_RS06210 904757df4f04b15d0ecd2ea55bb8e6d2 837 SUPERFAMILY SSF56601 435 791 6.04E-109 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS06210 904757df4f04b15d0ecd2ea55bb8e6d2 837 SUPERFAMILY SSF56601 244 263 6.04E-109 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS06210 904757df4f04b15d0ecd2ea55bb8e6d2 837 SUPERFAMILY SSF56601 292 350 6.04E-109 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS06210 904757df4f04b15d0ecd2ea55bb8e6d2 837 PANTHER PTHR32282:SF5 643 808 4.6E-176 T 20-04-2016 AMC99_RS06210 904757df4f04b15d0ecd2ea55bb8e6d2 837 PANTHER PTHR32282:SF5 434 622 4.6E-176 T 20-04-2016 AMC99_RS06210 904757df4f04b15d0ecd2ea55bb8e6d2 837 PANTHER PTHR32282:SF5 8 347 4.6E-176 T 20-04-2016 AMC99_RS06210 904757df4f04b15d0ecd2ea55bb8e6d2 837 Gene3D G3DSA:1.10.3810.10 83 262 2.1E-61 T 20-04-2016 AMC99_RS06210 904757df4f04b15d0ecd2ea55bb8e6d2 837 Pfam PF00905 Penicillin binding protein transpeptidase domain 441 730 4.0E-24 T 20-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMC99_RS06210 904757df4f04b15d0ecd2ea55bb8e6d2 837 PANTHER PTHR32282 643 808 4.6E-176 T 20-04-2016 AMC99_RS06210 904757df4f04b15d0ecd2ea55bb8e6d2 837 PANTHER PTHR32282 434 622 4.6E-176 T 20-04-2016 AMC99_RS06210 904757df4f04b15d0ecd2ea55bb8e6d2 837 PANTHER PTHR32282 8 347 4.6E-176 T 20-04-2016 AMC99_RS06210 904757df4f04b15d0ecd2ea55bb8e6d2 837 Pfam PF00912 Transglycosylase 82 259 4.8E-54 T 20-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMC99_RS06210 904757df4f04b15d0ecd2ea55bb8e6d2 837 Gene3D G3DSA:3.40.710.10 263 350 2.4E-113 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS06210 904757df4f04b15d0ecd2ea55bb8e6d2 837 Gene3D G3DSA:3.40.710.10 433 790 2.4E-113 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS06210 904757df4f04b15d0ecd2ea55bb8e6d2 837 SUPERFAMILY SSF53955 69 284 9.0E-63 T 20-04-2016 IPR023346 Lysozyme-like domain AMC99_RS04750 758368e5d04d771b734d551fbdfa4b23 71 Pfam PF11003 Protein of unknown function (DUF2842) 8 67 3.2E-14 T 20-04-2016 IPR021265 Protein of unknown function DUF2842 AMC99_RS03865 2aa84d0651de28f02cabb0bc5ba83cbd 209 Gene3D G3DSA:3.30.1020.10 158 208 4.0E-28 T 20-04-2016 AMC99_RS03865 2aa84d0651de28f02cabb0bc5ba83cbd 209 Pfam PF00578 AhpC/TSA family 5 135 1.1E-31 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMC99_RS03865 2aa84d0651de28f02cabb0bc5ba83cbd 209 PANTHER PTHR10681:SF99 3 208 2.0E-91 T 20-04-2016 AMC99_RS03865 2aa84d0651de28f02cabb0bc5ba83cbd 209 PIRSF PIRSF000239 1 208 1.6E-79 T 20-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 AMC99_RS03865 2aa84d0651de28f02cabb0bc5ba83cbd 209 PANTHER PTHR10681 3 208 2.0E-91 T 20-04-2016 AMC99_RS03865 2aa84d0651de28f02cabb0bc5ba83cbd 209 SUPERFAMILY SSF52833 3 207 3.4E-70 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS03865 2aa84d0651de28f02cabb0bc5ba83cbd 209 Gene3D G3DSA:3.40.30.10 5 157 6.0E-62 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS03865 2aa84d0651de28f02cabb0bc5ba83cbd 209 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 195 8.5E-14 T 20-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMC99_RS01475 596680c2b511e20cf8c6228dacf83766 269 SUPERFAMILY SSF53613 3 263 3.74E-76 T 20-04-2016 IPR029056 Ribokinase-like AMC99_RS01475 596680c2b511e20cf8c6228dacf83766 269 PANTHER PTHR20858 3 262 2.5E-107 T 20-04-2016 AMC99_RS01475 596680c2b511e20cf8c6228dacf83766 269 Gene3D G3DSA:3.40.1190.20 5 262 6.3E-96 T 20-04-2016 IPR029056 Ribokinase-like AMC99_RS01475 596680c2b511e20cf8c6228dacf83766 269 PANTHER PTHR20858:SF17 3 262 2.5E-107 T 20-04-2016 AMC99_RS01475 596680c2b511e20cf8c6228dacf83766 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 7 262 1.3E-82 T 20-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMC99_RS01475 596680c2b511e20cf8c6228dacf83766 269 Pfam PF08543 Phosphomethylpyrimidine kinase 14 260 5.6E-88 T 20-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 AMC99_RS05225 c32405687ce4710a4d9b27daa334134f 149 Gene3D G3DSA:1.10.10.410 94 147 7.7E-15 T 20-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AMC99_RS05225 c32405687ce4710a4d9b27daa334134f 149 Gene3D G3DSA:1.10.1510.10 2 93 3.5E-26 T 20-04-2016 AMC99_RS05225 c32405687ce4710a4d9b27daa334134f 149 Pfam PF09424 Yqey-like protein 4 147 1.3E-41 T 20-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial AMC99_RS05225 c32405687ce4710a4d9b27daa334134f 149 PANTHER PTHR28055 1 147 1.5E-36 T 20-04-2016 AMC99_RS05225 c32405687ce4710a4d9b27daa334134f 149 SUPERFAMILY SSF89095 1 147 4.97E-34 T 20-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AMC99_RS05225 c32405687ce4710a4d9b27daa334134f 149 PANTHER PTHR28055:SF1 1 147 1.5E-36 T 20-04-2016 AMC99_RS03235 147ce220e65289434968d97b86fa5b43 113 TIGRFAM TIGR01795 CM_mono_cladeE: chorismate mutase 23 107 5.0E-40 T 20-04-2016 IPR010951 Chorismate mutase, bacteria AMC99_RS03235 147ce220e65289434968d97b86fa5b43 113 Pfam PF01817 Chorismate mutase type II 27 102 1.8E-18 T 20-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMC99_RS03235 147ce220e65289434968d97b86fa5b43 113 Gene3D G3DSA:1.20.59.10 14 105 8.4E-20 T 20-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMC99_RS03235 147ce220e65289434968d97b86fa5b43 113 SUPERFAMILY SSF48600 23 106 5.19E-24 T 20-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMC99_RS03235 147ce220e65289434968d97b86fa5b43 113 SMART SM00830 27 107 9.0E-22 T 20-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMC99_RS00605 96d92e1b4220637da7ad8ec59b93af5a 159 Gene3D G3DSA:1.10.490.10 30 139 4.9E-19 T 20-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMC99_RS00605 96d92e1b4220637da7ad8ec59b93af5a 159 SUPERFAMILY SSF46458 29 138 1.11E-24 T 20-04-2016 IPR009050 Globin-like AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 SUPERFAMILY SSF52540 3 304 2.52E-80 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 43.17 T 20-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 Gene3D G3DSA:1.10.150.300 132 202 2.8E-22 T 20-04-2016 IPR023192 TGS-like domain AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 Gene3D G3DSA:3.40.50.300 4 131 3.0E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 Gene3D G3DSA:3.40.50.300 203 269 3.0E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 2.8E-35 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 2.8E-35 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 2.8E-35 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.8E-35 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 SUPERFAMILY SSF81271 282 363 7.85E-36 T 20-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 PANTHER PTHR23305 1 366 3.1E-206 T 20-04-2016 AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 Gene3D G3DSA:3.10.20.30 270 366 1.4E-49 T 20-04-2016 IPR012675 Beta-grasp domain AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 3.2E-40 T 20-04-2016 IPR013029 Domain of unknown function DUF933 AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 9.1E-152 T 20-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 Pfam PF01926 50S ribosome-binding GTPase 4 120 1.5E-23 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS05360 78f8115894634a104543142a7bdff8af 366 PIRSF PIRSF006641 1 366 1.2E-155 T 20-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AMC99_RS02205 9f5b2f487f85e22eb671ccbcc4fa192b 298 SUPERFAMILY SSF49899 32 292 7.0E-61 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMC99_RS02205 9f5b2f487f85e22eb671ccbcc4fa192b 298 PANTHER PTHR10963 37 251 6.0E-41 T 20-04-2016 AMC99_RS02205 9f5b2f487f85e22eb671ccbcc4fa192b 298 Gene3D G3DSA:2.60.120.200 16 296 8.4E-61 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMC99_RS02205 9f5b2f487f85e22eb671ccbcc4fa192b 298 Pfam PF00722 Glycosyl hydrolases family 16 110 262 5.4E-30 T 20-04-2016 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 AMC99_RS10420 3546e0b347c3f290a9308c05d448b2cd 83 SUPERFAMILY SSF50037 3 78 8.55E-10 T 20-04-2016 IPR008988 Transcriptional repressor, C-terminal AMC99_RS10420 3546e0b347c3f290a9308c05d448b2cd 83 Pfam PF04023 FeoA domain 1 77 1.8E-15 T 20-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AMC99_RS10420 3546e0b347c3f290a9308c05d448b2cd 83 SMART SM00899 1 78 3.2E-16 T 20-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AMC99_RS12415 7d8bd4a98e7408b8c7a23662796436bc 133 Gene3D G3DSA:3.10.450.50 9 115 5.9E-14 T 20-04-2016 IPR032710 NTF2-like domain AMC99_RS12415 7d8bd4a98e7408b8c7a23662796436bc 133 Pfam PF12680 SnoaL-like domain 9 104 1.3E-10 T 20-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain AMC99_RS12415 7d8bd4a98e7408b8c7a23662796436bc 133 SUPERFAMILY SSF54427 8 115 6.27E-17 T 20-04-2016 IPR032710 NTF2-like domain AMC99_RS12640 469668d83c4776a43add6d5118761df5 412 SUPERFAMILY SSF51261 290 411 6.8E-18 T 20-04-2016 IPR011055 Duplicated hybrid motif AMC99_RS12640 469668d83c4776a43add6d5118761df5 412 PANTHER PTHR21666 175 412 2.4E-15 T 20-04-2016 AMC99_RS12640 469668d83c4776a43add6d5118761df5 412 PANTHER PTHR21666:SF200 175 412 2.4E-15 T 20-04-2016 AMC99_RS12640 469668d83c4776a43add6d5118761df5 412 Gene3D G3DSA:2.70.70.10 289 411 5.3E-21 T 20-04-2016 AMC99_RS12640 469668d83c4776a43add6d5118761df5 412 Pfam PF01551 Peptidase family M23 319 407 1.9E-13 T 20-04-2016 IPR016047 Peptidase M23 AMC99_RS08190 67b9a20143bd8e0e99a11dd545c76d83 343 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 313 4.7E-4 T 20-04-2016 IPR020801 Polyketide synthase, acyl transferase domain AMC99_RS08190 67b9a20143bd8e0e99a11dd545c76d83 343 Gene3D G3DSA:3.40.366.10 207 305 6.1E-20 T 20-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AMC99_RS08190 67b9a20143bd8e0e99a11dd545c76d83 343 Gene3D G3DSA:3.40.366.10 2 126 6.1E-20 T 20-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AMC99_RS08190 67b9a20143bd8e0e99a11dd545c76d83 343 SUPERFAMILY SSF52151 5 132 7.32E-31 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMC99_RS08190 67b9a20143bd8e0e99a11dd545c76d83 343 SUPERFAMILY SSF52151 209 308 7.32E-31 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMC99_RS12765 9a27182a2a434bcded8c9c8e1263bea0 239 Gene3D G3DSA:3.10.560.10 119 207 2.5E-11 T 20-04-2016 AMC99_RS12765 9a27182a2a434bcded8c9c8e1263bea0 239 Pfam PF02563 Polysaccharide biosynthesis/export protein 51 119 1.7E-12 T 20-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMC99_RS12765 9a27182a2a434bcded8c9c8e1263bea0 239 Gene3D G3DSA:3.30.1950.10 55 118 1.2E-11 T 20-04-2016 AMC99_RS12765 9a27182a2a434bcded8c9c8e1263bea0 239 PANTHER PTHR33619 52 238 1.1E-26 T 20-04-2016 AMC99_RS12335 61ad687719a9b9c5a86f3a6681e76b00 109 Gene3D G3DSA:2.60.300.12 4 97 6.4E-31 T 20-04-2016 IPR000361 FeS cluster biogenesis AMC99_RS12335 61ad687719a9b9c5a86f3a6681e76b00 109 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 104 5.9E-20 T 20-04-2016 IPR000361 FeS cluster biogenesis AMC99_RS12335 61ad687719a9b9c5a86f3a6681e76b00 109 SUPERFAMILY SSF89360 5 97 4.71E-28 T 20-04-2016 IPR000361 FeS cluster biogenesis AMC99_RS12335 61ad687719a9b9c5a86f3a6681e76b00 109 PANTHER PTHR10072 4 109 4.2E-44 T 20-04-2016 AMC99_RS12335 61ad687719a9b9c5a86f3a6681e76b00 109 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 5 108 1.3E-35 T 20-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 AMC99_RS12335 61ad687719a9b9c5a86f3a6681e76b00 109 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 90 107 - T 20-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site AMC99_RS13045 220d00a14c97a200b39242509512acb4 95 Gene3D G3DSA:1.10.287.110 39 91 4.8E-12 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS13045 220d00a14c97a200b39242509512acb4 95 SMART SM00271 38 92 5.2E-4 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS13045 220d00a14c97a200b39242509512acb4 95 SUPERFAMILY SSF46565 36 91 6.8E-13 T 20-04-2016 IPR001623 DnaJ domain AMC99_RS13180 c77375affa92c784417bc570350cc649 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 6.5E-15 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS13180 c77375affa92c784417bc570350cc649 200 SUPERFAMILY SSF46689 11 93 1.23E-19 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS13180 c77375affa92c784417bc570350cc649 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 7.3E-10 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS13180 c77375affa92c784417bc570350cc649 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 7.3E-10 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS13180 c77375affa92c784417bc570350cc649 200 Gene3D G3DSA:1.10.357.10 11 199 1.3E-40 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMC99_RS13180 c77375affa92c784417bc570350cc649 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 66 - T 20-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMC99_RS13180 c77375affa92c784417bc570350cc649 200 PANTHER PTHR30055 7 200 4.1E-26 T 20-04-2016 AMC99_RS00625 5d50347ee4573f3daddc0e6c78190b05 398 Pfam PF05940 NnrS protein 6 392 1.7E-44 T 20-04-2016 IPR010266 NnrS AMC99_RS07680 ff5b2bbecac366614a3f214c675c3eaf 161 Pfam PF01478 Type IV leader peptidase family 9 109 8.6E-13 T 20-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AMC99_RS08500 c459ed0eec257dc22354a48e8bff0d18 386 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 29 168 1.5E-62 T 20-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 AMC99_RS08500 c459ed0eec257dc22354a48e8bff0d18 386 Pfam PF13286 Phosphohydrolase-associated domain 287 371 4.0E-22 T 20-04-2016 IPR026875 Phosphohydrolase-associated domain AMC99_RS08500 c459ed0eec257dc22354a48e8bff0d18 386 PANTHER PTHR11373:SF25 1 162 7.5E-72 T 20-04-2016 AMC99_RS08500 c459ed0eec257dc22354a48e8bff0d18 386 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 3 376 36.354 T 20-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 AMC99_RS08500 c459ed0eec257dc22354a48e8bff0d18 386 Gene3D G3DSA:1.10.3210.10 276 381 4.7E-78 T 20-04-2016 IPR006674 HD domain AMC99_RS08500 c459ed0eec257dc22354a48e8bff0d18 386 Gene3D G3DSA:1.10.3210.10 29 209 4.7E-78 T 20-04-2016 IPR006674 HD domain AMC99_RS08500 c459ed0eec257dc22354a48e8bff0d18 386 PANTHER PTHR11373 1 162 7.5E-72 T 20-04-2016 AMC99_RS08500 c459ed0eec257dc22354a48e8bff0d18 386 Pfam PF01966 HD domain 66 200 1.8E-15 T 20-04-2016 IPR006674 HD domain AMC99_RS08500 c459ed0eec257dc22354a48e8bff0d18 386 SUPERFAMILY SSF109604 28 373 2.59E-84 T 20-04-2016 AMC99_RS08500 c459ed0eec257dc22354a48e8bff0d18 386 SMART SM00471 62 210 2.0E-12 T 20-04-2016 IPR003607 HD/PDEase domain AMC99_RS08500 c459ed0eec257dc22354a48e8bff0d18 386 Gene3D G3DSA:1.10.3410.10 210 263 6.6E-4 T 20-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain AMC99_RS04020 9cc0e574a18b626c5f778c2774804436 271 PANTHER PTHR33490 1 265 3.9E-57 T 20-04-2016 AMC99_RS04020 9cc0e574a18b626c5f778c2774804436 271 SMART SM00460 158 222 3.9E-17 T 20-04-2016 IPR002931 Transglutaminase-like AMC99_RS04020 9cc0e574a18b626c5f778c2774804436 271 Gene3D G3DSA:3.90.260.10 162 255 1.3E-11 T 20-04-2016 IPR002931 Transglutaminase-like AMC99_RS04020 9cc0e574a18b626c5f778c2774804436 271 PANTHER PTHR33490:SF5 1 265 3.9E-57 T 20-04-2016 AMC99_RS04020 9cc0e574a18b626c5f778c2774804436 271 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 81 9.8E-18 T 20-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal AMC99_RS04020 9cc0e574a18b626c5f778c2774804436 271 Pfam PF01841 Transglutaminase-like superfamily 117 219 2.2E-25 T 20-04-2016 IPR002931 Transglutaminase-like AMC99_RS04020 9cc0e574a18b626c5f778c2774804436 271 SUPERFAMILY SSF54001 92 247 4.49E-41 T 20-04-2016 AMC99_RS05285 6f1d9a8c0e967eec0f5c02143530a8c9 163 Gene3D G3DSA:1.10.10.10 93 151 3.6E-6 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS05285 6f1d9a8c0e967eec0f5c02143530a8c9 163 SUPERFAMILY SSF46785 76 153 3.92E-7 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01040 58d6064c03a6f3b45e3e0a86e6d6b9df 203 PANTHER PTHR12725 5 197 2.6E-16 T 20-04-2016 AMC99_RS01040 58d6064c03a6f3b45e3e0a86e6d6b9df 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 2.4E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMC99_RS01040 58d6064c03a6f3b45e3e0a86e6d6b9df 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 2.4E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMC99_RS01040 58d6064c03a6f3b45e3e0a86e6d6b9df 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 2.4E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMC99_RS01040 58d6064c03a6f3b45e3e0a86e6d6b9df 203 SUPERFAMILY SSF56784 6 196 2.86E-32 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS01040 58d6064c03a6f3b45e3e0a86e6d6b9df 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 77 184 1.4E-13 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMC99_RS01040 58d6064c03a6f3b45e3e0a86e6d6b9df 203 PANTHER PTHR12725:SF63 5 197 2.6E-16 T 20-04-2016 AMC99_RS01040 58d6064c03a6f3b45e3e0a86e6d6b9df 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 70 182 6.7E-11 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS01040 58d6064c03a6f3b45e3e0a86e6d6b9df 203 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 178 1.1E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMC99_RS01040 58d6064c03a6f3b45e3e0a86e6d6b9df 203 Gene3D G3DSA:3.40.50.1000 5 197 1.4E-28 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS00685 a492fcfc2500c010acacd114a5a149b2 162 Gene3D G3DSA:3.90.1170.40 3 151 2.1E-39 T 20-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS00685 a492fcfc2500c010acacd114a5a149b2 162 SUPERFAMILY SSF54690 6 151 9.15E-37 T 20-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS00685 a492fcfc2500c010acacd114a5a149b2 162 Pfam PF02391 MoaE protein 9 122 1.6E-27 T 20-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS00685 a492fcfc2500c010acacd114a5a149b2 162 PANTHER PTHR23404:SF2 29 161 2.8E-24 T 20-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS00685 a492fcfc2500c010acacd114a5a149b2 162 PANTHER PTHR23404 29 161 2.8E-24 T 20-04-2016 AMC99_RS10355 ff86b0988ef5376f84b93886b5ed39f6 517 PANTHER PTHR30250 32 512 7.7E-41 T 20-04-2016 AMC99_RS10355 ff86b0988ef5376f84b93886b5ed39f6 517 Pfam PF13440 Polysaccharide biosynthesis protein 67 358 1.2E-54 T 20-04-2016 AMC99_RS10355 ff86b0988ef5376f84b93886b5ed39f6 517 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 363 497 3.6E-9 T 20-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AMC99_RS10355 ff86b0988ef5376f84b93886b5ed39f6 517 PANTHER PTHR30250:SF0 32 512 7.7E-41 T 20-04-2016 AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 SUPERFAMILY SSF51735 9 257 5.61E-59 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PANTHER PTHR24322 167 198 6.0E-51 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PANTHER PTHR24322 11 151 6.0E-51 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 Pfam PF00106 short chain dehydrogenase 9 209 9.0E-47 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 Gene3D G3DSA:3.40.50.720 9 257 2.3E-65 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PANTHER PTHR24322:SF356 167 198 6.0E-51 T 20-04-2016 AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PANTHER PTHR24322:SF356 11 151 6.0E-51 T 20-04-2016 AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.1E-9 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 1.1E-9 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 1.1E-9 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 9.3E-28 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.3E-28 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 9.3E-28 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 9.3E-28 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 9.3E-28 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS09445 1c0329c8b33f0afa9e2e75aa456e2e1a 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS03425 427a1b2630feacd774f7048c98bdedd9 156 Gene3D G3DSA:2.40.50.140 30 128 1.1E-34 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS03425 427a1b2630feacd774f7048c98bdedd9 156 PANTHER PTHR34128 7 150 9.5E-40 T 20-04-2016 AMC99_RS03425 427a1b2630feacd774f7048c98bdedd9 156 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 4 144 28.54 T 20-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AMC99_RS03425 427a1b2630feacd774f7048c98bdedd9 156 PANTHER PTHR34128:SF1 7 150 9.5E-40 T 20-04-2016 AMC99_RS03425 427a1b2630feacd774f7048c98bdedd9 156 SUPERFAMILY SSF82093 32 137 1.1E-35 T 20-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AMC99_RS03425 427a1b2630feacd774f7048c98bdedd9 156 Pfam PF03100 CcmE 7 133 2.8E-42 T 20-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AMC99_RS07435 874b61780def0cd603977b7951a08aeb 214 Pfam PF00406 Adenylate kinase 5 191 1.7E-50 T 20-04-2016 AMC99_RS07435 874b61780def0cd603977b7951a08aeb 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMC99_RS07435 874b61780def0cd603977b7951a08aeb 214 SUPERFAMILY SSF52540 3 213 3.24E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07435 874b61780def0cd603977b7951a08aeb 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 43.987 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMC99_RS07435 874b61780def0cd603977b7951a08aeb 214 PRINTS PR00094 Adenylate kinase signature 81 97 2.3E-29 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMC99_RS07435 874b61780def0cd603977b7951a08aeb 214 PRINTS PR00094 Adenylate kinase signature 161 176 2.3E-29 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMC99_RS07435 874b61780def0cd603977b7951a08aeb 214 PRINTS PR00094 Adenylate kinase signature 178 192 2.3E-29 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMC99_RS07435 874b61780def0cd603977b7951a08aeb 214 PRINTS PR00094 Adenylate kinase signature 4 17 2.3E-29 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMC99_RS07435 874b61780def0cd603977b7951a08aeb 214 PRINTS PR00094 Adenylate kinase signature 32 46 2.3E-29 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMC99_RS07435 874b61780def0cd603977b7951a08aeb 214 Pfam PF05191 Adenylate kinase, active site lid 127 163 9.8E-12 T 20-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMC99_RS07435 874b61780def0cd603977b7951a08aeb 214 Gene3D G3DSA:3.40.50.300 2 212 5.3E-66 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07435 874b61780def0cd603977b7951a08aeb 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 4.6E-73 T 20-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMC99_RS07435 874b61780def0cd603977b7951a08aeb 214 PANTHER PTHR23359 1 214 6.4E-78 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMC99_RS01140 6d7d6726c68782157f37a0c8f380acbd 331 SUPERFAMILY SSF53474 43 323 8.96E-49 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS01140 6d7d6726c68782157f37a0c8f380acbd 331 PANTHER PTHR10992 34 218 9.4E-31 T 20-04-2016 AMC99_RS01140 6d7d6726c68782157f37a0c8f380acbd 331 PANTHER PTHR10992 244 325 9.4E-31 T 20-04-2016 AMC99_RS01140 6d7d6726c68782157f37a0c8f380acbd 331 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 60 68 4.8E-12 T 20-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_RS01140 6d7d6726c68782157f37a0c8f380acbd 331 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 88 99 4.8E-12 T 20-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_RS01140 6d7d6726c68782157f37a0c8f380acbd 331 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 133 147 4.8E-12 T 20-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_RS01140 6d7d6726c68782157f37a0c8f380acbd 331 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 40 323 9.1E-82 T 20-04-2016 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_RS01140 6d7d6726c68782157f37a0c8f380acbd 331 Pfam PF12697 Alpha/beta hydrolase family 60 314 1.5E-16 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS01140 6d7d6726c68782157f37a0c8f380acbd 331 PIRSF PIRSF005539 32 330 1.5E-81 T 20-04-2016 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_RS01140 6d7d6726c68782157f37a0c8f380acbd 331 Gene3D G3DSA:3.40.50.1820 46 323 2.0E-47 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS12425 9315ed1a61205248c7083714fcd5e431 232 Gene3D G3DSA:3.40.50.1820 12 231 1.9E-43 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS12425 9315ed1a61205248c7083714fcd5e431 232 Pfam PF01738 Dienelactone hydrolase family 16 229 1.8E-46 T 20-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 AMC99_RS12425 9315ed1a61205248c7083714fcd5e431 232 PANTHER PTHR17630 15 231 3.7E-40 T 20-04-2016 AMC99_RS12425 9315ed1a61205248c7083714fcd5e431 232 SUPERFAMILY SSF53474 12 231 9.93E-41 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS07995 928b189f56af5d460ff40e44afcea148 130 PANTHER PTHR35814 1 121 3.6E-21 T 20-04-2016 AMC99_RS07995 928b189f56af5d460ff40e44afcea148 130 SUPERFAMILY SSF161084 4 124 2.88E-25 T 20-04-2016 AMC99_RS07995 928b189f56af5d460ff40e44afcea148 130 Pfam PF01124 MAPEG family 9 123 2.9E-24 T 20-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AMC99_RS07995 928b189f56af5d460ff40e44afcea148 130 Gene3D G3DSA:1.20.120.550 8 128 1.1E-16 T 20-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AMC99_RS06235 94c284b912d218109cb7b0b7992621d8 378 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 221 243 - T 20-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMC99_RS06235 94c284b912d218109cb7b0b7992621d8 378 Pfam PF01066 CDP-alcohol phosphatidyltransferase 179 243 4.8E-11 T 20-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMC99_RS02910 2edf3ccbf807500f51ffc814deb8ea3c 262 Pfam PF09976 Tetratricopeptide repeat-like domain 44 213 4.0E-14 T 20-04-2016 IPR018704 Tetratricopeptide repeat-like domain AMC99_RS01670 280b6afb985ea847d3e3c1d519063097 264 PANTHER PTHR11941 1 261 2.4E-108 T 20-04-2016 AMC99_RS01670 280b6afb985ea847d3e3c1d519063097 264 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 20-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AMC99_RS01670 280b6afb985ea847d3e3c1d519063097 264 PANTHER PTHR11941:SF54 1 261 2.4E-108 T 20-04-2016 AMC99_RS01670 280b6afb985ea847d3e3c1d519063097 264 Gene3D G3DSA:3.90.226.10 1 262 5.0E-93 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS01670 280b6afb985ea847d3e3c1d519063097 264 SUPERFAMILY SSF52096 1 264 3.65E-88 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS01670 280b6afb985ea847d3e3c1d519063097 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 263 9.2E-76 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMC99_RS05915 5933cdafda4bbccd704b74be0845fc88 157 PIRSF PIRSF032131 1 156 1.3E-44 T 20-04-2016 IPR009562 Protein of unknown function DUF1178 AMC99_RS05915 5933cdafda4bbccd704b74be0845fc88 157 Pfam PF06676 Protein of unknown function (DUF1178) 1 149 1.5E-50 T 20-04-2016 IPR009562 Protein of unknown function DUF1178 AMC99_RS06185 a4d43f6bce5631b2d238318cb89a11dd 71 PANTHER PTHR35530 1 60 1.3E-14 T 20-04-2016 AMC99_RS06185 a4d43f6bce5631b2d238318cb89a11dd 71 SUPERFAMILY SSF55331 2 65 1.08E-13 T 20-04-2016 IPR014347 Tautomerase/MIF superfamily AMC99_RS06185 a4d43f6bce5631b2d238318cb89a11dd 71 PANTHER PTHR35530:SF1 1 60 1.3E-14 T 20-04-2016 AMC99_RS06185 a4d43f6bce5631b2d238318cb89a11dd 71 Pfam PF01361 Tautomerase enzyme 2 62 2.1E-14 T 20-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AMC99_RS06185 a4d43f6bce5631b2d238318cb89a11dd 71 Gene3D G3DSA:3.30.429.20 1 59 3.9E-17 T 20-04-2016 AMC99_RS13585 d8fcd2e396abd27e63c4444b46c55bcb 280 Gene3D G3DSA:3.40.50.1000 164 274 1.5E-8 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS10995 b9e7aa28ea280f739fea965e8eebad48 231 Pfam PF01553 Acyltransferase 59 180 7.2E-13 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMC99_RS10995 b9e7aa28ea280f739fea965e8eebad48 231 SUPERFAMILY SSF69593 9 224 1.31E-24 T 20-04-2016 AMC99_RS10995 b9e7aa28ea280f739fea965e8eebad48 231 PANTHER PTHR10434 1 227 7.2E-24 T 20-04-2016 AMC99_RS10995 b9e7aa28ea280f739fea965e8eebad48 231 Gene3D G3DSA:3.40.1130.10 67 188 4.1E-7 T 20-04-2016 AMC99_RS10995 b9e7aa28ea280f739fea965e8eebad48 231 SMART SM00563 69 183 8.1E-18 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMC99_RS00660 5289ebc0ab1475006bce3645fc83f5e4 238 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 5.3E-32 T 20-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 AMC99_RS00660 5289ebc0ab1475006bce3645fc83f5e4 238 Pfam PF02613 Nitrate reductase delta subunit 33 156 1.8E-11 T 20-04-2016 IPR020945 DMSO/Nitrate reductase chaperone AMC99_RS00660 5289ebc0ab1475006bce3645fc83f5e4 238 SUPERFAMILY SSF89155 3 163 1.11E-28 T 20-04-2016 IPR020945 DMSO/Nitrate reductase chaperone AMC99_RS00660 5289ebc0ab1475006bce3645fc83f5e4 238 PANTHER PTHR30598:SF1 4 215 1.5E-45 T 20-04-2016 AMC99_RS00660 5289ebc0ab1475006bce3645fc83f5e4 238 PANTHER PTHR30598 4 215 1.5E-45 T 20-04-2016 AMC99_RS04855 7afc60bf33a75ab6cdda3ebf3427a5cc 532 SUPERFAMILY SSF51621 4 391 2.11E-123 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS04855 7afc60bf33a75ab6cdda3ebf3427a5cc 532 SUPERFAMILY SSF51621 428 513 2.11E-123 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS04855 7afc60bf33a75ab6cdda3ebf3427a5cc 532 Pfam PF00463 Isocitrate lyase family 320 390 3.4E-10 T 20-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 AMC99_RS04855 7afc60bf33a75ab6cdda3ebf3427a5cc 532 Pfam PF00463 Isocitrate lyase family 97 268 4.7E-22 T 20-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 AMC99_RS04855 7afc60bf33a75ab6cdda3ebf3427a5cc 532 Pfam PF00463 Isocitrate lyase family 423 529 1.8E-12 T 20-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 AMC99_RS04855 7afc60bf33a75ab6cdda3ebf3427a5cc 532 PANTHER PTHR21631 95 143 2.9E-79 T 20-04-2016 AMC99_RS04855 7afc60bf33a75ab6cdda3ebf3427a5cc 532 PANTHER PTHR21631 167 265 2.9E-79 T 20-04-2016 AMC99_RS04855 7afc60bf33a75ab6cdda3ebf3427a5cc 532 PANTHER PTHR21631 316 408 2.9E-79 T 20-04-2016 AMC99_RS04855 7afc60bf33a75ab6cdda3ebf3427a5cc 532 PANTHER PTHR21631 445 532 2.9E-79 T 20-04-2016 AMC99_RS04855 7afc60bf33a75ab6cdda3ebf3427a5cc 532 Gene3D G3DSA:3.20.20.60 4 269 4.8E-139 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS04855 7afc60bf33a75ab6cdda3ebf3427a5cc 532 Gene3D G3DSA:3.20.20.60 428 512 4.8E-139 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS04855 7afc60bf33a75ab6cdda3ebf3427a5cc 532 Gene3D G3DSA:3.20.20.60 302 391 4.8E-139 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS08300 6c0a3977175774ff7979bfdeb403a58d 173 PANTHER PTHR31899 8 145 4.0E-27 T 20-04-2016 AMC99_RS10720 69c5861729343f47ccabe82c674c81e1 388 Pfam PF09594 Protein of unknown function (DUF2029) 88 309 1.0E-25 T 20-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 AMC99_RS09130 bfefd099d0e166e266c07b2da5581b38 485 Pfam PF01225 Mur ligase family, catalytic domain 42 91 1.8E-11 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09130 bfefd099d0e166e266c07b2da5581b38 485 PANTHER PTHR23135 29 477 2.8E-126 T 20-04-2016 AMC99_RS09130 bfefd099d0e166e266c07b2da5581b38 485 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 47 480 1.1E-109 T 20-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09130 bfefd099d0e166e266c07b2da5581b38 485 SUPERFAMILY SSF53244 339 480 2.29E-29 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS09130 bfefd099d0e166e266c07b2da5581b38 485 PANTHER PTHR23135:SF3 29 477 2.8E-126 T 20-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09130 bfefd099d0e166e266c07b2da5581b38 485 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 23 481 31.5 T 20-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS09130 bfefd099d0e166e266c07b2da5581b38 485 SUPERFAMILY SSF63418 22 112 1.09E-24 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09130 bfefd099d0e166e266c07b2da5581b38 485 Gene3D G3DSA:3.90.190.20 339 480 1.8E-35 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS09130 bfefd099d0e166e266c07b2da5581b38 485 Pfam PF02875 Mur ligase family, glutamate ligase domain 348 420 2.0E-11 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMC99_RS09130 bfefd099d0e166e266c07b2da5581b38 485 Gene3D G3DSA:3.40.1190.10 105 329 4.3E-54 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09130 bfefd099d0e166e266c07b2da5581b38 485 Pfam PF08245 Mur ligase middle domain 121 313 1.9E-42 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09130 bfefd099d0e166e266c07b2da5581b38 485 SUPERFAMILY SSF53623 118 331 4.45E-43 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS09130 bfefd099d0e166e266c07b2da5581b38 485 Gene3D G3DSA:3.40.1390.10 36 104 1.5E-24 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMC99_RS04040 2cf5388a5c987d0551aa6fa0d6f25ef7 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 5 20 3.6E-7 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS04040 2cf5388a5c987d0551aa6fa0d6f25ef7 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 52 3.6E-7 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS04040 2cf5388a5c987d0551aa6fa0d6f25ef7 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 3.6E-7 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS04040 2cf5388a5c987d0551aa6fa0d6f25ef7 101 SUPERFAMILY SSF46785 3 78 4.02E-20 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS04040 2cf5388a5c987d0551aa6fa0d6f25ef7 101 PANTHER PTHR33154 1 86 1.4E-15 T 20-04-2016 AMC99_RS04040 2cf5388a5c987d0551aa6fa0d6f25ef7 101 Gene3D G3DSA:1.10.10.10 2 81 3.2E-23 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS04040 2cf5388a5c987d0551aa6fa0d6f25ef7 101 SMART SM00418 3 81 1.2E-17 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS04040 2cf5388a5c987d0551aa6fa0d6f25ef7 101 Pfam PF12840 Helix-turn-helix domain 4 57 2.9E-14 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS02880 3a058e9d08986d4d28ce657aca174942 150 Pfam PF05433 Glycine zipper 2TM domain 102 142 1.9E-8 T 20-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 AMC99_RS13625 f2ca9df2fe24421b3bebdb236530eee5 135 Pfam PF10116 Protein required for attachment to host cells 9 131 1.6E-19 T 20-04-2016 IPR019291 Host attachment protein AMC99_RS06875 e541a631c53c4afe1d0738e6847b2d76 261 PANTHER PTHR12737:SF9 1 256 1.2E-46 T 20-04-2016 AMC99_RS06875 e541a631c53c4afe1d0738e6847b2d76 261 SUPERFAMILY SSF55909 11 257 9.16E-45 T 20-04-2016 AMC99_RS06875 e541a631c53c4afe1d0738e6847b2d76 261 Pfam PF02274 Amidinotransferase 30 254 1.5E-15 T 20-04-2016 AMC99_RS06875 e541a631c53c4afe1d0738e6847b2d76 261 Gene3D G3DSA:3.75.10.10 6 256 7.9E-59 T 20-04-2016 AMC99_RS06875 e541a631c53c4afe1d0738e6847b2d76 261 PANTHER PTHR12737 1 256 1.2E-46 T 20-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 PANTHER PTHR10169:SF48 281 699 2.4E-178 T 20-04-2016 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 PANTHER PTHR10169:SF48 15 264 2.4E-178 T 20-04-2016 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 SUPERFAMILY SSF101904 526 763 4.05E-50 T 20-04-2016 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 41 480 3.1E-135 T 20-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 Gene3D G3DSA:3.30.1360.40 246 355 9.9E-28 T 20-04-2016 IPR024946 Arginine repressor C-terminal-like domain AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 SUPERFAMILY SSF56719 40 502 7.46E-151 T 20-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 PANTHER PTHR10169 281 699 2.4E-178 T 20-04-2016 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 PANTHER PTHR10169 15 264 2.4E-178 T 20-04-2016 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 SMART SM00434 20 485 5.6E-210 T 20-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 Gene3D G3DSA:3.90.199.10 40 245 1.5E-106 T 20-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 Gene3D G3DSA:3.90.199.10 357 421 1.5E-106 T 20-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 13 765 31.727 T 20-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 Gene3D G3DSA:2.120.10.90 524 709 6.4E-31 T 20-04-2016 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 21 764 1.2E-257 T 20-04-2016 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 624 667 2.1 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 573 608 7.3 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_RS08610 7a7c088b5c8a55cf7c643ed9f4bed238 767 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 673 710 3.2E-5 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_RS12755 3a67b9dbdc6b095b2e893c9a1849128c 252 Pfam PF03567 Sulfotransferase family 89 237 1.2E-7 T 20-04-2016 IPR005331 Sulfotransferase GO:0008146|GO:0016021 AMC99_RS12755 3a67b9dbdc6b095b2e893c9a1849128c 252 SUPERFAMILY SSF52540 44 238 5.31E-10 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07540 2dd8fd1b50c222ae7e87862694effa6a 207 Gene3D G3DSA:3.40.1370.10 58 205 8.0E-50 T 20-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AMC99_RS07540 2dd8fd1b50c222ae7e87862694effa6a 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 202 2.5E-63 T 20-04-2016 IPR013005 50S ribosomal protein uL4 AMC99_RS07540 2dd8fd1b50c222ae7e87862694effa6a 207 SUPERFAMILY SSF52166 2 205 2.75E-65 T 20-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AMC99_RS07540 2dd8fd1b50c222ae7e87862694effa6a 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 28.078 T 20-04-2016 IPR013005 50S ribosomal protein uL4 AMC99_RS07540 2dd8fd1b50c222ae7e87862694effa6a 207 PANTHER PTHR10746 1 204 1.1E-80 T 20-04-2016 IPR013005 50S ribosomal protein uL4 AMC99_RS07540 2dd8fd1b50c222ae7e87862694effa6a 207 Pfam PF00573 Ribosomal protein L4/L1 family 16 203 1.3E-59 T 20-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 PANTHER PTHR11406 5 398 5.6E-160 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 PIRSF PIRSF000724 1 399 7.9E-125 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 399 36.179 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 375 392 2.8E-69 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 33 55 2.8E-69 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 192 211 2.8E-69 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 12 28 2.8E-69 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 169 191 2.8E-69 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 352 363 2.8E-69 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 139 161 2.8E-69 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 111 126 2.8E-69 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 315 340 2.8E-69 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 Gene3D G3DSA:3.40.50.1270 181 387 1.4E-72 T 20-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 Gene3D G3DSA:3.40.50.1260 5 180 1.6E-54 T 20-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 SUPERFAMILY SSF53748 4 398 4.48E-136 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS04780 d73fa8d245f7324b79731ea86f315ec5 399 Pfam PF00162 Phosphoglycerate kinase 8 389 7.1E-129 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMC99_RS09210 1ac6fc761b9027043dcbf9e6f3c76818 216 Pfam PF03379 CcmB protein 2 211 1.2E-43 T 20-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS09210 1ac6fc761b9027043dcbf9e6f3c76818 216 PANTHER PTHR30070 1 215 1.3E-29 T 20-04-2016 AMC99_RS09210 1ac6fc761b9027043dcbf9e6f3c76818 216 PANTHER PTHR30070:SF1 1 215 1.3E-29 T 20-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS09210 1ac6fc761b9027043dcbf9e6f3c76818 216 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 188 211 8.6E-37 T 20-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS09210 1ac6fc761b9027043dcbf9e6f3c76818 216 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 27 48 8.6E-37 T 20-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS09210 1ac6fc761b9027043dcbf9e6f3c76818 216 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 53 70 8.6E-37 T 20-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS09210 1ac6fc761b9027043dcbf9e6f3c76818 216 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 132 155 8.6E-37 T 20-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS09210 1ac6fc761b9027043dcbf9e6f3c76818 216 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 76 99 8.6E-37 T 20-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS09210 1ac6fc761b9027043dcbf9e6f3c76818 216 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 101 119 8.6E-37 T 20-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_RS09210 1ac6fc761b9027043dcbf9e6f3c76818 216 PIRSF PIRSF002764 1 215 1.0E-50 T 20-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AMC99_RS01550 2c285aaf89de6793f04937216f2a7f1f 367 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 11 364 5.1E-93 T 20-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AMC99_RS01550 2c285aaf89de6793f04937216f2a7f1f 367 Pfam PF03739 Predicted permease YjgP/YjgQ family 14 362 3.6E-60 T 20-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 AMC99_RS01550 2c285aaf89de6793f04937216f2a7f1f 367 PANTHER PTHR33529 6 367 1.1E-47 T 20-04-2016 AMC99_RS01550 2c285aaf89de6793f04937216f2a7f1f 367 PANTHER PTHR33529:SF1 6 367 1.1E-47 T 20-04-2016 AMC99_RS07255 3eae979c634e22365bed6116450db413 172 PANTHER PTHR34183 80 170 4.2E-49 T 20-04-2016 AMC99_RS07255 3eae979c634e22365bed6116450db413 172 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 80 170 1.4E-44 T 20-04-2016 IPR012997 Rare lipoprotein A AMC99_RS07255 3eae979c634e22365bed6116450db413 172 Gene3D G3DSA:2.40.40.10 115 166 1.5E-7 T 20-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMC99_RS07255 3eae979c634e22365bed6116450db413 172 PANTHER PTHR34183:SF2 80 170 4.2E-49 T 20-04-2016 AMC99_RS07255 3eae979c634e22365bed6116450db413 172 SUPERFAMILY SSF50685 75 161 8.02E-15 T 20-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMC99_RS07255 3eae979c634e22365bed6116450db413 172 Pfam PF03330 Lytic transglycolase 79 166 6.4E-25 T 20-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMC99_RS02715 048bd98b907c2678b0b98f4267e694fa 379 Pfam PF11288 Protein of unknown function (DUF3089) 95 295 2.0E-64 T 20-04-2016 IPR021440 Protein of unknown function DUF3089 AMC99_RS02715 048bd98b907c2678b0b98f4267e694fa 379 SUPERFAMILY SSF53474 126 239 5.3E-9 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS02715 048bd98b907c2678b0b98f4267e694fa 379 Gene3D G3DSA:3.40.50.1820 85 219 2.5E-6 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS11190 fddab39cf6e4e157d4bae4fc95f1567f 245 SUPERFAMILY SSF53335 13 186 1.32E-18 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS11190 fddab39cf6e4e157d4bae4fc95f1567f 245 Gene3D G3DSA:3.40.50.150 22 158 2.5E-17 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS11190 fddab39cf6e4e157d4bae4fc95f1567f 245 Pfam PF08241 Methyltransferase domain 40 120 2.4E-10 T 20-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AMC99_RS06080 821c1cfd0cb36d9ff810e53db10076eb 101 PANTHER PTHR11434 4 101 3.3E-42 T 20-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMC99_RS06080 821c1cfd0cb36d9ff810e53db10076eb 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 2.7E-23 T 20-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMC99_RS06080 821c1cfd0cb36d9ff810e53db10076eb 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 19.628 T 20-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMC99_RS06865 c1ba74743cc457e062300d0686e27ac8 362 SUPERFAMILY SSF111369 67 123 6.8E-13 T 20-04-2016 AMC99_RS06865 c1ba74743cc457e062300d0686e27ac8 362 SUPERFAMILY SSF111369 152 187 6.8E-13 T 20-04-2016 AMC99_RS06865 c1ba74743cc457e062300d0686e27ac8 362 SUPERFAMILY SSF111369 185 283 2.09E-6 T 20-04-2016 AMC99_RS06865 c1ba74743cc457e062300d0686e27ac8 362 Gene3D G3DSA:2.40.50.100 225 259 5.2E-19 T 20-04-2016 AMC99_RS06865 c1ba74743cc457e062300d0686e27ac8 362 Gene3D G3DSA:2.40.50.100 69 102 5.2E-19 T 20-04-2016 AMC99_RS06865 c1ba74743cc457e062300d0686e27ac8 362 Pfam PF13533 Biotin-lipoyl like 70 117 2.5E-17 T 20-04-2016 AMC99_RS06865 c1ba74743cc457e062300d0686e27ac8 362 PANTHER PTHR30386:SF7 28 357 4.8E-81 T 20-04-2016 AMC99_RS06865 c1ba74743cc457e062300d0686e27ac8 362 PANTHER PTHR30386 28 357 4.8E-81 T 20-04-2016 AMC99_RS06865 c1ba74743cc457e062300d0686e27ac8 362 Pfam PF13437 HlyD family secretion protein 228 338 2.5E-12 T 20-04-2016 AMC99_RS03765 49c0023c447c89827a33603336511631 312 PANTHER PTHR11921:SF28 9 105 1.3E-71 T 20-04-2016 AMC99_RS03765 49c0023c447c89827a33603336511631 312 PANTHER PTHR11921:SF28 128 288 1.3E-71 T 20-04-2016 AMC99_RS03765 49c0023c447c89827a33603336511631 312 Pfam PF02754 Cysteine-rich domain 160 255 6.1E-11 T 20-04-2016 IPR004017 Cysteine-rich domain AMC99_RS03765 49c0023c447c89827a33603336511631 312 Pfam PF02754 Cysteine-rich domain 12 96 1.6E-14 T 20-04-2016 IPR004017 Cysteine-rich domain AMC99_RS03765 49c0023c447c89827a33603336511631 312 PANTHER PTHR11921 9 105 1.3E-71 T 20-04-2016 AMC99_RS03765 49c0023c447c89827a33603336511631 312 PANTHER PTHR11921 128 288 1.3E-71 T 20-04-2016 AMC99_RS02305 fb66a026a15de2675a629e93f70085d6 966 Gene3D G3DSA:2.170.130.10 43 161 6.7E-33 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS02305 fb66a026a15de2675a629e93f70085d6 966 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 158 5.9E-25 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS02305 fb66a026a15de2675a629e93f70085d6 966 SUPERFAMILY SSF56935 30 222 3.05E-97 T 20-04-2016 AMC99_RS02305 fb66a026a15de2675a629e93f70085d6 966 SUPERFAMILY SSF56935 389 450 3.05E-97 T 20-04-2016 AMC99_RS02305 fb66a026a15de2675a629e93f70085d6 966 SUPERFAMILY SSF56935 761 966 3.05E-97 T 20-04-2016 AMC99_RS02305 fb66a026a15de2675a629e93f70085d6 966 SUPERFAMILY SSF56935 283 331 3.05E-97 T 20-04-2016 AMC99_RS02305 fb66a026a15de2675a629e93f70085d6 966 SUPERFAMILY SSF56935 504 722 3.05E-97 T 20-04-2016 AMC99_RS02305 fb66a026a15de2675a629e93f70085d6 966 Gene3D G3DSA:2.40.170.20 776 966 1.5E-77 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02305 fb66a026a15de2675a629e93f70085d6 966 Gene3D G3DSA:2.40.170.20 370 431 1.5E-77 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02305 fb66a026a15de2675a629e93f70085d6 966 Gene3D G3DSA:2.40.170.20 162 220 1.5E-77 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02305 fb66a026a15de2675a629e93f70085d6 966 Gene3D G3DSA:2.40.170.20 258 316 1.5E-77 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02305 fb66a026a15de2675a629e93f70085d6 966 Gene3D G3DSA:2.40.170.20 484 737 1.5E-77 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02305 fb66a026a15de2675a629e93f70085d6 966 PANTHER PTHR30069 4 821 3.6E-42 T 20-04-2016 AMC99_RS02305 fb66a026a15de2675a629e93f70085d6 966 Pfam PF00593 TonB dependent receptor 628 964 2.1E-27 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02305 fb66a026a15de2675a629e93f70085d6 966 PANTHER PTHR30069:SF7 4 821 3.6E-42 T 20-04-2016 AMC99_RS05840 3c2501afe463187150ee1f268e0a94b0 280 PANTHER PTHR30468:SF2 1 279 8.5E-49 T 20-04-2016 AMC99_RS05840 3c2501afe463187150ee1f268e0a94b0 280 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 12 274 2.8E-53 T 20-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 AMC99_RS05840 3c2501afe463187150ee1f268e0a94b0 280 SUPERFAMILY SSF51197 4 277 2.24E-73 T 20-04-2016 AMC99_RS05840 3c2501afe463187150ee1f268e0a94b0 280 PANTHER PTHR30468 1 279 8.5E-49 T 20-04-2016 AMC99_RS05840 3c2501afe463187150ee1f268e0a94b0 280 Gene3D G3DSA:3.60.130.10 2 277 4.2E-72 T 20-04-2016 AMC99_RS04760 854d615bdb619b03669299719bdcf910 150 SUPERFAMILY SSF102829 3 72 4.84E-12 T 20-04-2016 IPR007838 Cell division protein ZapA-like AMC99_RS04760 854d615bdb619b03669299719bdcf910 150 Pfam PF05164 Cell division protein ZapA 4 91 4.8E-15 T 20-04-2016 IPR007838 Cell division protein ZapA-like AMC99_RS13300 07e63787fd74f7bfee5e4af8aab33c04 151 Pfam PF10983 Protein of unknown function (DUF2793) 29 110 4.0E-20 T 20-04-2016 IPR021251 Protein of unknown function DUF2793 AMC99_RS05330 6f4a0f36f67c5ccb9a38bf3dc313edcd 301 PANTHER PTHR34138:SF1 13 256 2.3E-41 T 20-04-2016 AMC99_RS05330 6f4a0f36f67c5ccb9a38bf3dc313edcd 301 PANTHER PTHR34138 13 256 2.3E-41 T 20-04-2016 AMC99_RS05330 6f4a0f36f67c5ccb9a38bf3dc313edcd 301 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 67 257 6.3E-30 T 20-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 AMC99_RS05330 6f4a0f36f67c5ccb9a38bf3dc313edcd 301 Pfam PF04085 rod shape-determining protein MreC 138 271 1.9E-24 T 20-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 AMC99_RS02425 83d413a82c36e4223113975d0b336900 333 PANTHER PTHR33376 4 330 9.7E-108 T 20-04-2016 AMC99_RS02425 83d413a82c36e4223113975d0b336900 333 SUPERFAMILY SSF53850 148 258 3.98E-5 T 20-04-2016 AMC99_RS02425 83d413a82c36e4223113975d0b336900 333 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 43 278 1.2E-58 T 20-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AMC99_RS02425 83d413a82c36e4223113975d0b336900 333 PIRSF PIRSF006470 15 331 1.7E-83 T 20-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AMC99_RS02425 83d413a82c36e4223113975d0b336900 333 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 314 1.4E-77 T 20-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AMC99_RS02425 83d413a82c36e4223113975d0b336900 333 PANTHER PTHR33376:SF6 4 330 9.7E-108 T 20-04-2016 AMC99_RS10530 bd88b5cd7df4b2b52e756f22c749395d 301 Pfam PF00561 alpha/beta hydrolase fold 27 270 3.2E-19 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS10530 bd88b5cd7df4b2b52e756f22c749395d 301 Gene3D G3DSA:3.40.50.1820 12 286 8.2E-55 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS10530 bd88b5cd7df4b2b52e756f22c749395d 301 SUPERFAMILY SSF53474 12 286 1.93E-44 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS10530 bd88b5cd7df4b2b52e756f22c749395d 301 PANTHER PTHR10992 21 286 8.2E-37 T 20-04-2016 AMC99_RS10530 bd88b5cd7df4b2b52e756f22c749395d 301 PRINTS PR00412 Epoxide hydrolase signature 261 283 8.93E-6 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS10530 bd88b5cd7df4b2b52e756f22c749395d 301 PRINTS PR00412 Epoxide hydrolase signature 53 68 8.93E-6 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS10530 bd88b5cd7df4b2b52e756f22c749395d 301 PRINTS PR00412 Epoxide hydrolase signature 33 51 8.93E-6 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_RS12020 802c47ab7872937c5289fa3d3b20aa75 364 Pfam PF09949 Uncharacterized conserved protein (DUF2183) 207 303 2.2E-29 T 20-04-2016 IPR019236 Domain of unknown function DUF2183 AMC99_RS12020 802c47ab7872937c5289fa3d3b20aa75 364 PANTHER PTHR28208 131 303 3.8E-37 T 20-04-2016 AMC99_RS09390 ab1bb8cec5a00cc9d71a7a527cd5e29d 163 PANTHER PTHR36506:SF1 10 130 2.3E-16 T 20-04-2016 AMC99_RS09390 ab1bb8cec5a00cc9d71a7a527cd5e29d 163 Pfam PF01478 Type IV leader peptidase family 14 116 5.0E-12 T 20-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AMC99_RS09390 ab1bb8cec5a00cc9d71a7a527cd5e29d 163 PANTHER PTHR36506 10 130 2.3E-16 T 20-04-2016 AMC99_RS04115 aa0c3dc1c52561ecacadb446eb79c5df 180 SUPERFAMILY SSF55811 26 157 1.76E-30 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS04115 aa0c3dc1c52561ecacadb446eb79c5df 180 Gene3D G3DSA:3.90.79.10 11 158 3.1E-39 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS04115 aa0c3dc1c52561ecacadb446eb79c5df 180 Pfam PF00293 NUDIX domain 36 108 5.8E-11 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMC99_RS04115 aa0c3dc1c52561ecacadb446eb79c5df 180 PANTHER PTHR11839 34 171 2.4E-27 T 20-04-2016 AMC99_RS01825 e397420bcf10f2a778d832f880814007 255 Pfam PF10503 Esterase PHB depolymerase 34 219 2.7E-11 T 20-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 AMC99_RS01825 e397420bcf10f2a778d832f880814007 255 Gene3D G3DSA:3.40.50.1820 29 224 1.0E-27 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS01825 e397420bcf10f2a778d832f880814007 255 SUPERFAMILY SSF53474 29 223 1.82E-29 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS09805 4ce4a1e7c757a761fe7fa34545b701e9 164 Pfam PF11026 Protein of unknown function (DUF2721) 33 152 5.3E-26 T 20-04-2016 IPR021279 Protein of unknown function DUF2721 AMC99_RS07865 5ccb79a1f5cdc05c03250a288e998982 279 Gene3D G3DSA:1.10.10.10 3 72 1.4E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS07865 5ccb79a1f5cdc05c03250a288e998982 279 PANTHER PTHR30537:SF26 5 277 1.1E-43 T 20-04-2016 AMC99_RS07865 5ccb79a1f5cdc05c03250a288e998982 279 PANTHER PTHR30537 5 277 1.1E-43 T 20-04-2016 AMC99_RS07865 5ccb79a1f5cdc05c03250a288e998982 279 Pfam PF03466 LysR substrate binding domain 81 276 1.5E-25 T 20-04-2016 IPR005119 LysR, substrate-binding AMC99_RS07865 5ccb79a1f5cdc05c03250a288e998982 279 Gene3D G3DSA:3.40.190.10 167 242 1.3E-7 T 20-04-2016 AMC99_RS07865 5ccb79a1f5cdc05c03250a288e998982 279 SUPERFAMILY SSF46785 3 72 3.43E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS07865 5ccb79a1f5cdc05c03250a288e998982 279 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 53 2.4E-15 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_RS07865 5ccb79a1f5cdc05c03250a288e998982 279 SUPERFAMILY SSF53850 81 277 1.61E-25 T 20-04-2016 AMC99_RS07865 5ccb79a1f5cdc05c03250a288e998982 279 Gene3D G3DSA:3.40.190.10 81 166 2.1E-13 T 20-04-2016 AMC99_RS07650 c15100cb9f290277529d094341512800 208 Pfam PF07811 TadE-like protein 15 57 1.1E-10 T 20-04-2016 IPR012495 TadE-like AMC99_RS11070 8a8c3dc3daa32883a145b9bb833d09dd 260 SUPERFAMILY SSF54637 122 253 1.23E-15 T 20-04-2016 IPR029069 HotDog domain AMC99_RS11070 8a8c3dc3daa32883a145b9bb833d09dd 260 Pfam PF13622 Thioesterase-like superfamily 33 252 8.5E-22 T 20-04-2016 AMC99_RS11070 8a8c3dc3daa32883a145b9bb833d09dd 260 SUPERFAMILY SSF54637 17 115 1.38E-7 T 20-04-2016 IPR029069 HotDog domain AMC99_RS06490 b569752f811a44111b9ffbb470f8c564 413 PANTHER PTHR10108:SF795 83 325 6.8E-81 T 20-04-2016 AMC99_RS06490 b569752f811a44111b9ffbb470f8c564 413 PANTHER PTHR10108:SF795 342 411 6.8E-81 T 20-04-2016 AMC99_RS06490 b569752f811a44111b9ffbb470f8c564 413 Pfam PF02353 Mycolic acid cyclopropane synthetase 146 407 3.2E-62 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS06490 b569752f811a44111b9ffbb470f8c564 413 PANTHER PTHR10108 83 325 6.8E-81 T 20-04-2016 AMC99_RS06490 b569752f811a44111b9ffbb470f8c564 413 PANTHER PTHR10108 342 411 6.8E-81 T 20-04-2016 AMC99_RS06490 b569752f811a44111b9ffbb470f8c564 413 Gene3D G3DSA:3.40.50.150 142 410 2.1E-77 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS06490 b569752f811a44111b9ffbb470f8c564 413 SUPERFAMILY SSF53335 153 411 5.88E-65 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS06490 b569752f811a44111b9ffbb470f8c564 413 PIRSF PIRSF003085 34 413 5.8E-97 T 20-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 SUPERFAMILY SSF51905 2 309 9.26E-52 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PANTHER PTHR22912 7 319 6.7E-145 T 20-04-2016 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 Gene3D G3DSA:3.50.50.60 121 230 2.4E-34 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.3E-37 T 20-04-2016 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.3E-37 T 20-04-2016 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.3E-37 T 20-04-2016 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.3E-37 T 20-04-2016 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 1.3E-37 T 20-04-2016 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 Gene3D G3DSA:3.50.50.60 4 120 6.6E-30 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 298 6.2E-50 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PANTHER PTHR22912:SF48 7 319 6.7E-145 T 20-04-2016 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 4.2E-70 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 4.2E-70 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 4.2E-70 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 4.2E-70 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 4.2E-70 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 4.2E-70 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 4.2E-70 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 4.2E-70 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 4.2E-70 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 20-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 Gene3D G3DSA:3.50.50.60 231 304 1.1E-6 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS04305 dfe6254064249ee058f5232b8d5e421d 328 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 309 4.8E-116 T 20-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 AMC99_RS07235 587f38a188cde5d17e46719580fd936b 246 SUPERFAMILY SSF56524 45 245 7.32E-51 T 20-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 AMC99_RS07235 587f38a188cde5d17e46719580fd936b 246 PANTHER PTHR19372:SF9 1 243 2.8E-55 T 20-04-2016 AMC99_RS07235 587f38a188cde5d17e46719580fd936b 246 PANTHER PTHR19372 1 243 2.8E-55 T 20-04-2016 AMC99_RS07235 587f38a188cde5d17e46719580fd936b 246 Pfam PF00174 Oxidoreductase molybdopterin binding domain 87 220 6.8E-35 T 20-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 AMC99_RS07235 587f38a188cde5d17e46719580fd936b 246 Gene3D G3DSA:3.90.420.10 77 243 1.7E-51 T 20-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 AMC99_RS12100 f089dd16c2f147a9c0ce1c204c3ae38b 501 PANTHER PTHR30008 18 473 5.7E-143 T 20-04-2016 AMC99_RS12100 f089dd16c2f147a9c0ce1c204c3ae38b 501 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 23 461 28.096 T 20-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AMC99_RS12100 f089dd16c2f147a9c0ce1c204c3ae38b 501 Pfam PF02601 Exonuclease VII, large subunit 142 457 4.4E-93 T 20-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AMC99_RS12100 f089dd16c2f147a9c0ce1c204c3ae38b 501 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 27 458 7.2E-129 T 20-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AMC99_RS12100 f089dd16c2f147a9c0ce1c204c3ae38b 501 PANTHER PTHR30008:SF0 18 473 5.7E-143 T 20-04-2016 AMC99_RS12100 f089dd16c2f147a9c0ce1c204c3ae38b 501 Pfam PF13742 OB-fold nucleic acid binding domain 26 119 7.4E-26 T 20-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AMC99_RS07420 c65d907013944448a79282b950fb7f15 129 Gene3D G3DSA:3.30.420.80 8 129 6.0E-55 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07420 c65d907013944448a79282b950fb7f15 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 9 129 32.445 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07420 c65d907013944448a79282b950fb7f15 129 PIRSF PIRSF002131 1 129 6.0E-52 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07420 c65d907013944448a79282b950fb7f15 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.8E-56 T 20-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07420 c65d907013944448a79282b950fb7f15 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 20-04-2016 IPR018102 Ribosomal S11, conserved site AMC99_RS07420 c65d907013944448a79282b950fb7f15 129 Pfam PF00411 Ribosomal protein S11 19 128 9.7E-49 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07420 c65d907013944448a79282b950fb7f15 129 PANTHER PTHR11759 10 129 2.5E-69 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMC99_RS07420 c65d907013944448a79282b950fb7f15 129 SUPERFAMILY SSF53137 14 129 1.37E-47 T 20-04-2016 AMC99_RS11940 81c378f8dca7b15da5cdb27b0a5930e1 402 Pfam PF01546 Peptidase family M20/M25/M40 79 392 6.5E-32 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMC99_RS11940 81c378f8dca7b15da5cdb27b0a5930e1 402 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 383 1.4E-98 T 20-04-2016 IPR017439 Amidohydrolase GO:0016787 AMC99_RS11940 81c378f8dca7b15da5cdb27b0a5930e1 402 SUPERFAMILY SSF55031 191 294 6.41E-28 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS11940 81c378f8dca7b15da5cdb27b0a5930e1 402 SUPERFAMILY SSF53187 5 204 1.07E-75 T 20-04-2016 AMC99_RS11940 81c378f8dca7b15da5cdb27b0a5930e1 402 SUPERFAMILY SSF53187 305 398 1.07E-75 T 20-04-2016 AMC99_RS11940 81c378f8dca7b15da5cdb27b0a5930e1 402 Gene3D G3DSA:3.30.70.360 188 304 4.9E-38 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS11940 81c378f8dca7b15da5cdb27b0a5930e1 402 PANTHER PTHR11014 15 401 9.5E-133 T 20-04-2016 AMC99_RS11940 81c378f8dca7b15da5cdb27b0a5930e1 402 PIRSF PIRSF005962 1 400 1.0E-108 T 20-04-2016 IPR017439 Amidohydrolase GO:0016787 AMC99_RS11940 81c378f8dca7b15da5cdb27b0a5930e1 402 Pfam PF07687 Peptidase dimerisation domain 192 290 2.9E-12 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain AMC99_RS11940 81c378f8dca7b15da5cdb27b0a5930e1 402 PANTHER PTHR11014:SF63 15 401 9.5E-133 T 20-04-2016 AMC99_RS11940 81c378f8dca7b15da5cdb27b0a5930e1 402 Gene3D G3DSA:3.40.630.10 2 185 1.3E-87 T 20-04-2016 AMC99_RS11940 81c378f8dca7b15da5cdb27b0a5930e1 402 Gene3D G3DSA:3.40.630.10 305 398 1.3E-87 T 20-04-2016 AMC99_RS06830 ad9a04d6922cfd5a5f3ce0f821c377a7 154 Pfam PF05618 Putative ATP-dependant zinc protease 10 143 2.1E-31 T 20-04-2016 AMC99_RS06830 ad9a04d6922cfd5a5f3ce0f821c377a7 154 SUPERFAMILY SSF50630 10 142 1.0E-41 T 20-04-2016 IPR021109 Aspartic peptidase domain AMC99_RS06830 ad9a04d6922cfd5a5f3ce0f821c377a7 154 PANTHER PTHR38037 10 154 2.3E-37 T 20-04-2016 AMC99_RS06830 ad9a04d6922cfd5a5f3ce0f821c377a7 154 Gene3D G3DSA:2.40.70.10 10 135 1.1E-40 T 20-04-2016 IPR021109 Aspartic peptidase domain AMC99_RS07970 351295a27d06464045d561b8ad012238 241 SUPERFAMILY SSF53335 3 228 1.7E-26 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS07970 351295a27d06464045d561b8ad012238 241 Pfam PF01209 ubiE/COQ5 methyltransferase family 11 237 1.0E-26 T 20-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMC99_RS07970 351295a27d06464045d561b8ad012238 241 PANTHER PTHR10108 13 173 8.5E-15 T 20-04-2016 AMC99_RS07970 351295a27d06464045d561b8ad012238 241 Gene3D G3DSA:3.40.50.150 11 229 1.6E-22 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS07970 351295a27d06464045d561b8ad012238 241 PANTHER PTHR10108:SF705 13 173 8.5E-15 T 20-04-2016 AMC99_RS04520 2e09c47fb8b55b8eeb2d0e1163ab47cf 256 Pfam PF04199 Putative cyclase 5 184 2.3E-34 T 20-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 AMC99_RS04520 2e09c47fb8b55b8eeb2d0e1163ab47cf 256 SUPERFAMILY SSF102198 3 254 6.93E-52 T 20-04-2016 AMC99_RS04520 2e09c47fb8b55b8eeb2d0e1163ab47cf 256 Gene3D G3DSA:3.50.30.50 3 254 8.1E-57 T 20-04-2016 AMC99_RS04520 2e09c47fb8b55b8eeb2d0e1163ab47cf 256 PANTHER PTHR31118 52 256 3.7E-31 T 20-04-2016 AMC99_RS04520 2e09c47fb8b55b8eeb2d0e1163ab47cf 256 PANTHER PTHR31118 3 32 3.7E-31 T 20-04-2016 AMC99_RS02810 d8d0990a688d6f0eec99f308a6539ddf 348 SMART SM00729 30 234 7.9E-6 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMC99_RS02810 d8d0990a688d6f0eec99f308a6539ddf 348 Gene3D G3DSA:3.20.20.70 20 319 7.2E-73 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS02810 d8d0990a688d6f0eec99f308a6539ddf 348 Pfam PF13353 4Fe-4S single cluster domain 37 141 7.0E-7 T 20-04-2016 AMC99_RS02810 d8d0990a688d6f0eec99f308a6539ddf 348 SUPERFAMILY SSF102114 20 292 3.53E-73 T 20-04-2016 AMC99_RS02810 d8d0990a688d6f0eec99f308a6539ddf 348 PANTHER PTHR22960 21 299 6.9E-112 T 20-04-2016 AMC99_RS02810 d8d0990a688d6f0eec99f308a6539ddf 348 Pfam PF04055 Radical SAM superfamily 35 195 7.6E-27 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_RS02810 d8d0990a688d6f0eec99f308a6539ddf 348 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 36 47 - T 20-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS02810 d8d0990a688d6f0eec99f308a6539ddf 348 Pfam PF06463 Molybdenum Cofactor Synthesis C 203 328 7.1E-38 T 20-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS02810 d8d0990a688d6f0eec99f308a6539ddf 348 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 21 348 39.506 T 20-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS02810 d8d0990a688d6f0eec99f308a6539ddf 348 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 21 348 2.0E-109 T 20-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS03045 e22f9a2ab1a67548dc43abad495ddcad 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 119 222 5.4E-16 T 20-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMC99_RS03045 e22f9a2ab1a67548dc43abad495ddcad 227 PANTHER PTHR10869 45 226 1.6E-44 T 20-04-2016 AMC99_RS03045 e22f9a2ab1a67548dc43abad495ddcad 227 SMART SM00702 43 222 1.8E-31 T 20-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AMC99_RS13355 369e2d2b52648f8ffd74d15e3e939942 80 SUPERFAMILY SSF47336 2 78 4.84E-12 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMC99_RS13355 369e2d2b52648f8ffd74d15e3e939942 80 Gene3D G3DSA:1.10.1200.10 1 79 4.7E-15 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMC99_RS13355 369e2d2b52648f8ffd74d15e3e939942 80 Pfam PF00550 Phosphopantetheine attachment site 21 74 1.2E-9 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMC99_RS05770 1db9c48589743be61997bd60acca958f 180 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 27 86 4.2E-30 T 20-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMC99_RS05770 1db9c48589743be61997bd60acca958f 180 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 107 165 3.5E-20 T 20-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMC99_RS05770 1db9c48589743be61997bd60acca958f 180 PANTHER PTHR34772:SF1 22 116 1.8E-33 T 20-04-2016 AMC99_RS05770 1db9c48589743be61997bd60acca958f 180 PANTHER PTHR34772 22 116 1.8E-33 T 20-04-2016 AMC99_RS05770 1db9c48589743be61997bd60acca958f 180 SUPERFAMILY SSF50182 107 165 5.84E-18 T 20-04-2016 IPR010920 LSM domain AMC99_RS05770 1db9c48589743be61997bd60acca958f 180 Gene3D G3DSA:2.30.30.100 24 93 1.2E-33 T 20-04-2016 AMC99_RS05770 1db9c48589743be61997bd60acca958f 180 Gene3D G3DSA:2.30.30.100 102 174 6.6E-28 T 20-04-2016 AMC99_RS05770 1db9c48589743be61997bd60acca958f 180 SUPERFAMILY SSF50182 27 91 8.83E-23 T 20-04-2016 IPR010920 LSM domain AMC99_RS05770 1db9c48589743be61997bd60acca958f 180 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 24 86 27.994 T 20-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMC99_RS10570 5a3841cf46724889a2f74865e33689f1 187 Gene3D G3DSA:1.20.1260.10 56 152 2.9E-16 T 20-04-2016 IPR012347 Ferritin-related AMC99_RS10570 5a3841cf46724889a2f74865e33689f1 187 Pfam PF03713 Domain of unknown function (DUF305) 101 165 1.9E-10 T 20-04-2016 IPR005183 Domain of unknown function DUF305 AMC99_RS06870 54dac8ec36ff80ed1b178cb069fff0e2 533 PANTHER PTHR23501:SF69 23 455 2.0E-160 T 20-04-2016 AMC99_RS06870 54dac8ec36ff80ed1b178cb069fff0e2 533 SUPERFAMILY SSF103473 494 524 7.85E-69 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS06870 54dac8ec36ff80ed1b178cb069fff0e2 533 SUPERFAMILY SSF103473 31 218 7.85E-69 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS06870 54dac8ec36ff80ed1b178cb069fff0e2 533 SUPERFAMILY SSF103473 271 443 7.85E-69 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS06870 54dac8ec36ff80ed1b178cb069fff0e2 533 PANTHER PTHR23501 489 519 2.0E-160 T 20-04-2016 AMC99_RS06870 54dac8ec36ff80ed1b178cb069fff0e2 533 PANTHER PTHR23501 23 455 2.0E-160 T 20-04-2016 AMC99_RS06870 54dac8ec36ff80ed1b178cb069fff0e2 533 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 37 505 1.1E-119 T 20-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AMC99_RS06870 54dac8ec36ff80ed1b178cb069fff0e2 533 PANTHER PTHR23501:SF69 489 519 2.0E-160 T 20-04-2016 AMC99_RS06870 54dac8ec36ff80ed1b178cb069fff0e2 533 Gene3D G3DSA:1.20.1250.20 41 219 1.2E-32 T 20-04-2016 AMC99_RS06870 54dac8ec36ff80ed1b178cb069fff0e2 533 Gene3D G3DSA:1.20.1250.20 286 447 1.1E-16 T 20-04-2016 AMC99_RS06870 54dac8ec36ff80ed1b178cb069fff0e2 533 Gene3D G3DSA:1.20.1250.20 499 526 1.1E-16 T 20-04-2016 AMC99_RS06870 54dac8ec36ff80ed1b178cb069fff0e2 533 Pfam PF07690 Major Facilitator Superfamily 42 433 2.7E-55 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS02820 e18a56a9f5f67fd3a73bde2bfd90bd35 156 Pfam PF02391 MoaE protein 20 124 1.2E-26 T 20-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS02820 e18a56a9f5f67fd3a73bde2bfd90bd35 156 PANTHER PTHR23404 11 156 1.4E-21 T 20-04-2016 AMC99_RS02820 e18a56a9f5f67fd3a73bde2bfd90bd35 156 PANTHER PTHR23404:SF2 11 156 1.4E-21 T 20-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS02820 e18a56a9f5f67fd3a73bde2bfd90bd35 156 Gene3D G3DSA:3.90.1170.40 11 154 2.3E-37 T 20-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS02820 e18a56a9f5f67fd3a73bde2bfd90bd35 156 SUPERFAMILY SSF54690 22 154 1.44E-39 T 20-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMC99_RS00955 50c0a252095384c1a91904ac880dd1e9 217 SUPERFAMILY SSF46689 19 97 1.65E-17 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS00955 50c0a252095384c1a91904ac880dd1e9 217 PANTHER PTHR30055 12 213 1.4E-40 T 20-04-2016 AMC99_RS00955 50c0a252095384c1a91904ac880dd1e9 217 Gene3D G3DSA:1.10.357.10 73 216 1.1E-35 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMC99_RS00955 50c0a252095384c1a91904ac880dd1e9 217 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 161 213 1.2E-12 T 20-04-2016 AMC99_RS00955 50c0a252095384c1a91904ac880dd1e9 217 SUPERFAMILY SSF48498 94 214 2.35E-9 T 20-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMC99_RS00955 50c0a252095384c1a91904ac880dd1e9 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 74 5.9E-15 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS00955 50c0a252095384c1a91904ac880dd1e9 217 PANTHER PTHR30055:SF76 12 213 1.4E-40 T 20-04-2016 AMC99_RS00955 50c0a252095384c1a91904ac880dd1e9 217 Gene3D G3DSA:1.10.10.60 19 72 4.8E-20 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS00955 50c0a252095384c1a91904ac880dd1e9 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 3.7E-9 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS00955 50c0a252095384c1a91904ac880dd1e9 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 3.7E-9 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS07230 087e8be20cd2ef906e7e2501db77d1fb 222 Gene3D G3DSA:1.20.950.20 2 219 2.8E-39 T 20-04-2016 AMC99_RS07230 087e8be20cd2ef906e7e2501db77d1fb 222 Pfam PF01292 Prokaryotic cytochrome b561 3 217 1.0E-41 T 20-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AMC99_RS07230 087e8be20cd2ef906e7e2501db77d1fb 222 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 6 29 2.1E-7 T 20-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 AMC99_RS07230 087e8be20cd2ef906e7e2501db77d1fb 222 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 181 203 2.1E-7 T 20-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 AMC99_RS07230 087e8be20cd2ef906e7e2501db77d1fb 222 PANTHER PTHR30485 1 37 1.8E-24 T 20-04-2016 AMC99_RS07230 087e8be20cd2ef906e7e2501db77d1fb 222 PANTHER PTHR30485 53 217 1.8E-24 T 20-04-2016 AMC99_RS07230 087e8be20cd2ef906e7e2501db77d1fb 222 PANTHER PTHR30485:SF1 1 37 1.8E-24 T 20-04-2016 AMC99_RS07230 087e8be20cd2ef906e7e2501db77d1fb 222 PANTHER PTHR30485:SF1 53 217 1.8E-24 T 20-04-2016 AMC99_RS07230 087e8be20cd2ef906e7e2501db77d1fb 222 SUPERFAMILY SSF81342 2 220 3.92E-28 T 20-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 AMC99_RS04245 a991ac429c596ca543c900ae62e4a0e5 202 Gene3D G3DSA:1.10.8.60 126 191 3.5E-9 T 20-04-2016 AMC99_RS04245 a991ac429c596ca543c900ae62e4a0e5 202 Pfam PF00308 Bacterial dnaA protein 75 164 8.9E-7 T 20-04-2016 IPR013317 Chromosomal replication initiator protein DnaA AMC99_RS04245 a991ac429c596ca543c900ae62e4a0e5 202 Gene3D G3DSA:3.40.50.300 64 121 4.1E-7 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04245 a991ac429c596ca543c900ae62e4a0e5 202 PANTHER PTHR30050 71 192 5.0E-16 T 20-04-2016 AMC99_RS04245 a991ac429c596ca543c900ae62e4a0e5 202 SUPERFAMILY SSF52540 15 171 1.16E-8 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS04245 a991ac429c596ca543c900ae62e4a0e5 202 PANTHER PTHR30050:SF5 71 192 5.0E-16 T 20-04-2016 AMC99_RS00035 b4c4d2e314c025236d6efcc0becd6045 165 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 105 6.3E-20 T 20-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AMC99_RS00035 b4c4d2e314c025236d6efcc0becd6045 165 PANTHER PTHR11079:SF72 133 149 4.3E-21 T 20-04-2016 AMC99_RS00035 b4c4d2e314c025236d6efcc0becd6045 165 PANTHER PTHR11079:SF72 6 117 4.3E-21 T 20-04-2016 AMC99_RS00035 b4c4d2e314c025236d6efcc0becd6045 165 PANTHER PTHR11079 133 149 4.3E-21 T 20-04-2016 AMC99_RS00035 b4c4d2e314c025236d6efcc0becd6045 165 PANTHER PTHR11079 6 117 4.3E-21 T 20-04-2016 AMC99_RS00035 b4c4d2e314c025236d6efcc0becd6045 165 Gene3D G3DSA:3.40.140.10 2 150 7.8E-37 T 20-04-2016 AMC99_RS00035 b4c4d2e314c025236d6efcc0becd6045 165 SUPERFAMILY SSF53927 4 151 1.39E-34 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMC99_RS03340 338aa2394f41769027b1876fed3f6095 308 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 20-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 AMC99_RS03340 338aa2394f41769027b1876fed3f6095 308 PANTHER PTHR11741 1 308 1.2E-123 T 20-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 AMC99_RS03340 338aa2394f41769027b1876fed3f6095 308 SUPERFAMILY SSF54713 186 289 2.15E-44 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMC99_RS03340 338aa2394f41769027b1876fed3f6095 308 SUPERFAMILY SSF54713 57 92 2.15E-44 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMC99_RS03340 338aa2394f41769027b1876fed3f6095 308 Gene3D G3DSA:1.10.286.20 203 247 4.6E-16 T 20-04-2016 AMC99_RS03340 338aa2394f41769027b1876fed3f6095 308 SUPERFAMILY SSF46934 4 55 8.08E-17 T 20-04-2016 IPR009060 UBA-like GO:0005515 AMC99_RS03340 338aa2394f41769027b1876fed3f6095 308 Gene3D G3DSA:1.10.8.10 3 55 2.1E-24 T 20-04-2016 AMC99_RS03340 338aa2394f41769027b1876fed3f6095 308 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 20-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 AMC99_RS03340 338aa2394f41769027b1876fed3f6095 308 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 306 1.9E-85 T 20-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 AMC99_RS03340 338aa2394f41769027b1876fed3f6095 308 Pfam PF00889 Elongation factor TS 71 289 7.7E-65 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMC99_RS03340 338aa2394f41769027b1876fed3f6095 308 Gene3D G3DSA:3.30.479.20 57 93 9.5E-31 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMC99_RS03340 338aa2394f41769027b1876fed3f6095 308 Gene3D G3DSA:3.30.479.20 187 202 9.5E-31 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMC99_RS03340 338aa2394f41769027b1876fed3f6095 308 Gene3D G3DSA:3.30.479.20 248 292 9.5E-31 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMC99_RS03340 338aa2394f41769027b1876fed3f6095 308 Hamap MF_00050 Elongation factor Ts [tsf]. 1 307 72.944 T 20-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 AMC99_RS07800 a85654d5349ff479b234f5db4165e9b3 223 SUPERFAMILY SSF50630 99 201 2.29E-17 T 20-04-2016 IPR021109 Aspartic peptidase domain AMC99_RS07800 a85654d5349ff479b234f5db4165e9b3 223 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 118 129 - T 20-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AMC99_RS07800 a85654d5349ff479b234f5db4165e9b3 223 Pfam PF13975 gag-polyprotein putative aspartyl protease 108 198 4.3E-19 T 20-04-2016 AMC99_RS07800 a85654d5349ff479b234f5db4165e9b3 223 PANTHER PTHR41535:SF1 1 220 4.9E-18 T 20-04-2016 AMC99_RS07800 a85654d5349ff479b234f5db4165e9b3 223 PANTHER PTHR41535 1 220 4.9E-18 T 20-04-2016 AMC99_RS07800 a85654d5349ff479b234f5db4165e9b3 223 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 97 212 1.3E-26 T 20-04-2016 IPR011969 Clan AA aspartic peptidase, C-terminal AMC99_RS07800 a85654d5349ff479b234f5db4165e9b3 223 Gene3D G3DSA:2.40.70.10 108 199 8.7E-4 T 20-04-2016 IPR021109 Aspartic peptidase domain AMC99_RS01085 298efb382b307f85c4089c99f8adbe52 221 PANTHER PTHR11649 23 221 6.8E-57 T 20-04-2016 AMC99_RS01085 298efb382b307f85c4089c99f8adbe52 221 SUPERFAMILY SSF52540 24 213 7.92E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS01085 298efb382b307f85c4089c99f8adbe52 221 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 29 215 27.785 T 20-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 AMC99_RS01085 298efb382b307f85c4089c99f8adbe52 221 Gene3D G3DSA:3.40.50.300 33 213 6.2E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS01085 298efb382b307f85c4089c99f8adbe52 221 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 25 211 9.2E-68 T 20-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 AMC99_RS01085 298efb382b307f85c4089c99f8adbe52 221 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 43 187 5.6E-13 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_RS01085 298efb382b307f85c4089c99f8adbe52 221 Pfam PF01926 50S ribosome-binding GTPase 43 162 5.9E-20 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 AMC99_RS09640 08e67f6eb81dd97a91f429ffa650fae2 546 PANTHER PTHR30121 111 528 5.0E-62 T 20-04-2016 AMC99_RS09640 08e67f6eb81dd97a91f429ffa650fae2 546 Gene3D G3DSA:3.40.50.300 339 508 6.4E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09640 08e67f6eb81dd97a91f429ffa650fae2 546 Gene3D G3DSA:3.40.50.300 148 228 6.4E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09640 08e67f6eb81dd97a91f429ffa650fae2 546 Pfam PF01935 Domain of unknown function DUF87 143 377 8.5E-50 T 20-04-2016 IPR002789 Helicase HerA, central domain AMC99_RS09640 08e67f6eb81dd97a91f429ffa650fae2 546 PANTHER PTHR30121:SF1 111 528 5.0E-62 T 20-04-2016 AMC99_RS09640 08e67f6eb81dd97a91f429ffa650fae2 546 SUPERFAMILY SSF52540 114 512 3.68E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08110 a313e339cdbf29d3f50017e6dc5efd20 275 Gene3D G3DSA:3.60.130.10 2 272 2.1E-86 T 20-04-2016 AMC99_RS08110 a313e339cdbf29d3f50017e6dc5efd20 275 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 4 267 2.9E-62 T 20-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 AMC99_RS08110 a313e339cdbf29d3f50017e6dc5efd20 275 SUPERFAMILY SSF51197 2 272 7.78E-82 T 20-04-2016 AMC99_RS08110 a313e339cdbf29d3f50017e6dc5efd20 275 PANTHER PTHR30468:SF2 1 271 3.5E-72 T 20-04-2016 AMC99_RS08110 a313e339cdbf29d3f50017e6dc5efd20 275 PANTHER PTHR30468 1 271 3.5E-72 T 20-04-2016 AMC99_RS13085 09d7cea9ab78d676ad9df1ad807455a0 255 Pfam PF01618 MotA/TolQ/ExbB proton channel family 112 213 4.9E-33 T 20-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AMC99_RS13085 09d7cea9ab78d676ad9df1ad807455a0 255 PANTHER PTHR30625:SF3 21 226 5.0E-40 T 20-04-2016 AMC99_RS13085 09d7cea9ab78d676ad9df1ad807455a0 255 PANTHER PTHR30625 21 226 5.0E-40 T 20-04-2016 AMC99_RS10950 69263cce084c2051709f7b9f410c5a06 223 SUPERFAMILY SSF47616 85 220 1.85E-23 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS10950 69263cce084c2051709f7b9f410c5a06 223 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 1.9E-18 T 20-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_RS10950 69263cce084c2051709f7b9f410c5a06 223 Gene3D G3DSA:3.40.30.10 2 96 1.6E-25 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS10950 69263cce084c2051709f7b9f410c5a06 223 PANTHER PTHR11260:SF286 1 212 9.5E-48 T 20-04-2016 AMC99_RS10950 69263cce084c2051709f7b9f410c5a06 223 PANTHER PTHR11260 1 212 9.5E-48 T 20-04-2016 AMC99_RS10950 69263cce084c2051709f7b9f410c5a06 223 Gene3D G3DSA:1.20.1050.10 97 219 1.9E-29 T 20-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMC99_RS10950 69263cce084c2051709f7b9f410c5a06 223 SUPERFAMILY SSF52833 1 104 4.49E-23 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS07240 bc144b13e3e7685597f211702ff2a0a5 145 Pfam PF08818 Domain of unknown function (DU1801) 25 133 9.3E-11 T 20-04-2016 IPR014922 Domain of unknown function DUF1801 AMC99_RS00740 a29038d219f3a441c281b94761dcd88a 411 PIRSF PIRSF006060 1 405 2.1E-51 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS00740 a29038d219f3a441c281b94761dcd88a 411 PANTHER PTHR11785 2 377 6.5E-69 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS00740 a29038d219f3a441c281b94761dcd88a 411 PANTHER PTHR11785:SF366 2 377 6.5E-69 T 20-04-2016 AMC99_RS00740 a29038d219f3a441c281b94761dcd88a 411 Pfam PF00324 Amino acid permease 14 394 1.3E-31 T 20-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AMC99_RS08635 254cb1f289f187d103cc146f45892c08 218 SUPERFAMILY SSF53474 4 208 4.22E-49 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS08635 254cb1f289f187d103cc146f45892c08 218 PANTHER PTHR12277 27 210 4.2E-50 T 20-04-2016 AMC99_RS08635 254cb1f289f187d103cc146f45892c08 218 Gene3D G3DSA:3.40.50.1820 3 211 4.2E-59 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS08635 254cb1f289f187d103cc146f45892c08 218 PANTHER PTHR12277:SF79 27 210 4.2E-50 T 20-04-2016 AMC99_RS08635 254cb1f289f187d103cc146f45892c08 218 Pfam PF12146 Serine aminopeptidase, S33 46 134 6.3E-10 T 20-04-2016 IPR022742 Serine aminopeptidase, S33 AMC99_RS06785 51dbbc0b00b65eb2e4167a1628de2993 322 PANTHER PTHR30503 8 320 1.4E-67 T 20-04-2016 AMC99_RS06785 51dbbc0b00b65eb2e4167a1628de2993 322 Pfam PF05661 Protein of unknown function (DUF808) 4 303 1.0E-118 T 20-04-2016 IPR008526 Inner membrane protein YedI AMC99_RS06785 51dbbc0b00b65eb2e4167a1628de2993 322 PIRSF PIRSF016660 1 316 2.1E-107 T 20-04-2016 IPR008526 Inner membrane protein YedI AMC99_RS03200 f124a0f4d72a4515c31a3848f2b292fb 189 PANTHER PTHR42160 1 189 3.5E-72 T 20-04-2016 AMC99_RS03200 f124a0f4d72a4515c31a3848f2b292fb 189 SUPERFAMILY SSF52141 2 187 1.77E-49 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like AMC99_RS03200 f124a0f4d72a4515c31a3848f2b292fb 189 SMART SM00986 25 181 4.1E-27 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like AMC99_RS03200 f124a0f4d72a4515c31a3848f2b292fb 189 Gene3D G3DSA:3.40.470.10 2 188 7.0E-41 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like AMC99_RS03200 f124a0f4d72a4515c31a3848f2b292fb 189 SMART SM00987 25 181 4.1E-27 T 20-04-2016 AMC99_RS03200 f124a0f4d72a4515c31a3848f2b292fb 189 PANTHER PTHR42160:SF1 1 189 3.5E-72 T 20-04-2016 AMC99_RS03200 f124a0f4d72a4515c31a3848f2b292fb 189 Pfam PF03167 Uracil DNA glycosylase superfamily 29 181 7.6E-25 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like AMC99_RS10095 1a966ce47f94900c4d0d34dce893478d 346 SUPERFAMILY SSF52738 152 338 1.96E-55 T 20-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMC99_RS10095 1a966ce47f94900c4d0d34dce893478d 346 Pfam PF01339 CheB methylesterase 158 336 1.7E-47 T 20-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMC99_RS10095 1a966ce47f94900c4d0d34dce893478d 346 PANTHER PTHR24421:SF16 1 337 2.9E-84 T 20-04-2016 AMC99_RS10095 1a966ce47f94900c4d0d34dce893478d 346 Gene3D G3DSA:3.40.50.2300 1 122 1.0E-22 T 20-04-2016 AMC99_RS10095 1a966ce47f94900c4d0d34dce893478d 346 PANTHER PTHR24421 1 337 2.9E-84 T 20-04-2016 AMC99_RS10095 1a966ce47f94900c4d0d34dce893478d 346 SUPERFAMILY SSF52172 1 104 6.55E-21 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS10095 1a966ce47f94900c4d0d34dce893478d 346 Pfam PF00072 Response regulator receiver domain 1 103 3.0E-16 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS10095 1a966ce47f94900c4d0d34dce893478d 346 PIRSF PIRSF000876 1 343 4.7E-100 T 20-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMC99_RS10095 1a966ce47f94900c4d0d34dce893478d 346 SMART SM00448 1 120 3.9E-9 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS10095 1a966ce47f94900c4d0d34dce893478d 346 Gene3D G3DSA:3.40.50.180 149 338 1.1E-60 T 20-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMC99_RS09555 202f60f6314b966f8c6e7a9bba217d66 382 Gene3D G3DSA:3.40.50.2000 208 357 2.2E-16 T 20-04-2016 AMC99_RS09555 202f60f6314b966f8c6e7a9bba217d66 382 Pfam PF13692 Glycosyl transferases group 1 213 345 1.1E-22 T 20-04-2016 AMC99_RS09555 202f60f6314b966f8c6e7a9bba217d66 382 SUPERFAMILY SSF53756 8 377 3.14E-40 T 20-04-2016 AMC99_RS09555 202f60f6314b966f8c6e7a9bba217d66 382 PANTHER PTHR12526 212 382 1.5E-26 T 20-04-2016 AMC99_RS03095 c052656c7cbe87edb731f5990562800c 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 416 1.5E-56 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMC99_RS03095 c052656c7cbe87edb731f5990562800c 445 Pfam PF01554 MatE 22 181 4.8E-13 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMC99_RS03095 c052656c7cbe87edb731f5990562800c 445 Pfam PF01554 MatE 251 397 6.3E-13 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMC99_RS03095 c052656c7cbe87edb731f5990562800c 445 PANTHER PTHR11206:SF94 16 434 1.2E-74 T 20-04-2016 AMC99_RS03095 c052656c7cbe87edb731f5990562800c 445 PANTHER PTHR11206 16 434 1.2E-74 T 20-04-2016 AMC99_RS11655 62df911378d4d348bcf98d9b92275f07 171 Pfam PF04390 Lipopolysaccharide-assembly 7 154 6.3E-12 T 20-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AMC99_RS00425 5accc4ef2ba71c83f6ccfa7c4174d609 381 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 70 369 2.0E-49 T 20-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMC99_RS00425 5accc4ef2ba71c83f6ccfa7c4174d609 381 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 292 4.9E-21 T 20-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMC99_RS00425 5accc4ef2ba71c83f6ccfa7c4174d609 381 PANTHER PTHR30097 38 381 2.0E-64 T 20-04-2016 AMC99_RS00425 5accc4ef2ba71c83f6ccfa7c4174d609 381 PANTHER PTHR30097:SF4 38 381 2.0E-64 T 20-04-2016 AMC99_RS00425 5accc4ef2ba71c83f6ccfa7c4174d609 381 Gene3D G3DSA:2.40.50.100 85 117 5.9E-9 T 20-04-2016 AMC99_RS00425 5accc4ef2ba71c83f6ccfa7c4174d609 381 Gene3D G3DSA:2.40.50.100 190 223 5.9E-9 T 20-04-2016 AMC99_RS00425 5accc4ef2ba71c83f6ccfa7c4174d609 381 SUPERFAMILY SSF111369 81 299 8.37E-17 T 20-04-2016 AMC99_RS10700 25ba61f3597c08681d3a25b0396ab729 349 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 44 313 9.2E-18 T 20-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT AMC99_RS13745 69cb415f9af7e60e3f48003bf10fdc03 105 SUPERFAMILY SSF117782 1 105 3.53E-38 T 20-04-2016 IPR002765 Uncharacterised protein family UPF0145 AMC99_RS13745 69cb415f9af7e60e3f48003bf10fdc03 105 PANTHER PTHR34068:SF1 1 105 3.4E-41 T 20-04-2016 AMC99_RS13745 69cb415f9af7e60e3f48003bf10fdc03 105 PANTHER PTHR34068 1 105 3.4E-41 T 20-04-2016 AMC99_RS13745 69cb415f9af7e60e3f48003bf10fdc03 105 Gene3D G3DSA:3.30.110.70 1 105 2.9E-39 T 20-04-2016 IPR002765 Uncharacterised protein family UPF0145 AMC99_RS13745 69cb415f9af7e60e3f48003bf10fdc03 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.414 T 20-04-2016 IPR002765 Uncharacterised protein family UPF0145 AMC99_RS13745 69cb415f9af7e60e3f48003bf10fdc03 105 Pfam PF01906 Putative heavy-metal-binding 1 105 1.8E-40 T 20-04-2016 IPR002765 Uncharacterised protein family UPF0145 AMC99_RS12385 8399bc8eece211d12f6cd12730a3b7ff 195 Pfam PF02545 Maf-like protein 3 189 1.1E-33 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 AMC99_RS12385 8399bc8eece211d12f6cd12730a3b7ff 195 SUPERFAMILY SSF52972 2 189 6.08E-43 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMC99_RS12385 8399bc8eece211d12f6cd12730a3b7ff 195 PIRSF PIRSF006305 1 194 1.8E-36 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 AMC99_RS12385 8399bc8eece211d12f6cd12730a3b7ff 195 Hamap MF_00528 Septum formation protein Maf [maf]. 2 194 23.696 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 AMC99_RS12385 8399bc8eece211d12f6cd12730a3b7ff 195 Gene3D G3DSA:3.90.950.10 2 191 6.4E-42 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMC99_RS10795 ac8c883f523c5cc13dec5d6a7d7a50ad 344 Gene3D G3DSA:3.90.550.10 3 266 5.0E-86 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS10795 ac8c883f523c5cc13dec5d6a7d7a50ad 344 SUPERFAMILY SSF159283 279 338 3.66E-11 T 20-04-2016 AMC99_RS10795 ac8c883f523c5cc13dec5d6a7d7a50ad 344 PANTHER PTHR12526:SF387 150 287 6.6E-39 T 20-04-2016 AMC99_RS10795 ac8c883f523c5cc13dec5d6a7d7a50ad 344 SUPERFAMILY SSF53448 4 276 4.64E-69 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS10795 ac8c883f523c5cc13dec5d6a7d7a50ad 344 PANTHER PTHR12526 150 287 6.6E-39 T 20-04-2016 AMC99_RS10795 ac8c883f523c5cc13dec5d6a7d7a50ad 344 Pfam PF00483 Nucleotidyl transferase 8 281 7.2E-53 T 20-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMC99_RS04810 444fe7c0b8e6090b9aa5ae0387be7192 408 Gene3D G3DSA:1.10.101.10 62 122 5.8E-11 T 20-04-2016 IPR002477 Peptidoglycan binding-like AMC99_RS04810 444fe7c0b8e6090b9aa5ae0387be7192 408 PANTHER PTHR30582:SF1 205 406 6.4E-53 T 20-04-2016 AMC99_RS04810 444fe7c0b8e6090b9aa5ae0387be7192 408 PANTHER PTHR30582:SF1 71 145 6.4E-53 T 20-04-2016 AMC99_RS04810 444fe7c0b8e6090b9aa5ae0387be7192 408 Gene3D G3DSA:2.40.440.10 273 405 3.2E-28 T 20-04-2016 AMC99_RS04810 444fe7c0b8e6090b9aa5ae0387be7192 408 Pfam PF03734 L,D-transpeptidase catalytic domain 276 405 3.6E-16 T 20-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMC99_RS04810 444fe7c0b8e6090b9aa5ae0387be7192 408 SUPERFAMILY SSF47090 61 124 8.16E-14 T 20-04-2016 IPR002477 Peptidoglycan binding-like AMC99_RS04810 444fe7c0b8e6090b9aa5ae0387be7192 408 SUPERFAMILY SSF141523 274 405 3.53E-25 T 20-04-2016 AMC99_RS04810 444fe7c0b8e6090b9aa5ae0387be7192 408 Pfam PF01471 Putative peptidoglycan binding domain 67 120 4.8E-11 T 20-04-2016 IPR002477 Peptidoglycan binding-like AMC99_RS04810 444fe7c0b8e6090b9aa5ae0387be7192 408 PANTHER PTHR30582 205 406 6.4E-53 T 20-04-2016 AMC99_RS04810 444fe7c0b8e6090b9aa5ae0387be7192 408 PANTHER PTHR30582 71 145 6.4E-53 T 20-04-2016 AMC99_RS06305 5f8d2f6c7dd51b24395a2727b1b56144 299 SUPERFAMILY SSF88713 11 266 1.2E-51 T 20-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_RS06305 5f8d2f6c7dd51b24395a2727b1b56144 299 TIGRFAM TIGR03006 pepcterm_polyde: polysaccharide deacetylase family protein, PEP-CTERM locus subfamily 17 286 5.3E-129 T 20-04-2016 IPR014344 PEP-CTERM locus, polysaccharide deactylase AMC99_RS06305 5f8d2f6c7dd51b24395a2727b1b56144 299 PANTHER PTHR10587 55 171 3.1E-29 T 20-04-2016 AMC99_RS06305 5f8d2f6c7dd51b24395a2727b1b56144 299 Pfam PF11959 Domain of unknown function (DUF3473) 159 286 3.5E-49 T 20-04-2016 IPR022560 Domain of unknown function DUF3473 AMC99_RS06305 5f8d2f6c7dd51b24395a2727b1b56144 299 Gene3D G3DSA:3.20.20.370 5 288 2.3E-60 T 20-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_RS06305 5f8d2f6c7dd51b24395a2727b1b56144 299 Pfam PF01522 Polysaccharide deacetylase 50 157 6.7E-22 T 20-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_RS12635 dc2e94b3cf5e1f7fd56bb9a8f1707fba 140 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 138 23.713 T 20-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS12635 dc2e94b3cf5e1f7fd56bb9a8f1707fba 140 PANTHER PTHR33603:SF1 53 138 8.1E-33 T 20-04-2016 AMC99_RS12635 dc2e94b3cf5e1f7fd56bb9a8f1707fba 140 Gene3D G3DSA:3.40.1280.10 52 138 9.7E-36 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMC99_RS12635 dc2e94b3cf5e1f7fd56bb9a8f1707fba 140 SUPERFAMILY SSF75217 3 136 7.85E-37 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases AMC99_RS12635 dc2e94b3cf5e1f7fd56bb9a8f1707fba 140 PANTHER PTHR33603 53 138 8.1E-33 T 20-04-2016 AMC99_RS12635 dc2e94b3cf5e1f7fd56bb9a8f1707fba 140 Pfam PF02590 Predicted SPOUT methyltransferase 4 137 5.5E-32 T 20-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMC99_RS06120 019329c67024b9966edfaf0a8c175010 222 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 31 181 1.3E-54 T 20-04-2016 AMC99_RS06120 019329c67024b9966edfaf0a8c175010 222 PIRSF PIRSF000216 9 220 4.8E-62 T 20-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 AMC99_RS06120 019329c67024b9966edfaf0a8c175010 222 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 30 181 2.8E-51 T 20-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 AMC99_RS06120 019329c67024b9966edfaf0a8c175010 222 SUPERFAMILY SSF52833 22 192 2.46E-52 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS06120 019329c67024b9966edfaf0a8c175010 222 PANTHER PTHR10371 20 210 4.2E-90 T 20-04-2016 AMC99_RS06120 019329c67024b9966edfaf0a8c175010 222 Gene3D G3DSA:3.40.30.10 103 187 8.8E-13 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS07715 9a35f37cc18fbc40c818f0be262c0029 131 Pfam PF07811 TadE-like protein 12 54 1.7E-10 T 20-04-2016 IPR012495 TadE-like AMC99_RS12165 49b42253bfe03dfb716a7ae8f416b525 253 PANTHER PTHR24220:SF85 7 252 1.0E-113 T 20-04-2016 AMC99_RS12165 49b42253bfe03dfb716a7ae8f416b525 253 SUPERFAMILY SSF52540 2 239 3.88E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12165 49b42253bfe03dfb716a7ae8f416b525 253 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 6 248 2.8E-102 T 20-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 AMC99_RS12165 49b42253bfe03dfb716a7ae8f416b525 253 Gene3D G3DSA:3.40.50.300 2 244 2.8E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12165 49b42253bfe03dfb716a7ae8f416b525 253 Pfam PF00005 ABC transporter 21 176 3.9E-17 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS12165 49b42253bfe03dfb716a7ae8f416b525 253 PANTHER PTHR24220 7 252 1.0E-113 T 20-04-2016 AMC99_RS00285 e535b4978eaacb7ecde5d481a73f6ea7 519 Gene3D G3DSA:1.10.150.20 3 47 8.9E-4 T 20-04-2016 AMC99_RS00285 e535b4978eaacb7ecde5d481a73f6ea7 519 Gene3D G3DSA:1.10.10.10 116 159 1.2E-5 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS04015 e18f209a65ae607bd3d9ebe95c73875a 314 PANTHER PTHR34595 1 310 1.8E-75 T 20-04-2016 AMC99_RS04015 e18f209a65ae607bd3d9ebe95c73875a 314 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 310 9.0E-79 T 20-04-2016 IPR007296 Domain of unknown function DUF403 AMC99_RS11720 bb88b2e60893e119854d53c15a4b5157 156 Pfam PF00578 AhpC/TSA family 6 134 5.1E-32 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMC99_RS11720 bb88b2e60893e119854d53c15a4b5157 156 PANTHER PTHR10681 1 152 8.5E-41 T 20-04-2016 AMC99_RS11720 bb88b2e60893e119854d53c15a4b5157 156 Gene3D G3DSA:3.40.30.10 3 155 1.4E-44 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS11720 bb88b2e60893e119854d53c15a4b5157 156 SUPERFAMILY SSF52833 4 154 5.35E-45 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS11720 bb88b2e60893e119854d53c15a4b5157 156 PIRSF PIRSF000239 1 155 3.1E-21 T 20-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 AMC99_RS12780 be4a9fb86cb36e16ac370d4325fc32e6 274 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 259 7.5E-84 T 20-04-2016 AMC99_RS12780 be4a9fb86cb36e16ac370d4325fc32e6 274 PANTHER PTHR24322:SF317 14 150 3.7E-52 T 20-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMC99_RS12780 be4a9fb86cb36e16ac370d4325fc32e6 274 PANTHER PTHR24322:SF317 166 198 3.7E-52 T 20-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMC99_RS12780 be4a9fb86cb36e16ac370d4325fc32e6 274 SUPERFAMILY SSF51735 6 263 1.1E-64 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12780 be4a9fb86cb36e16ac370d4325fc32e6 274 PANTHER PTHR24322 14 150 3.7E-52 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS12780 be4a9fb86cb36e16ac370d4325fc32e6 274 PANTHER PTHR24322 166 198 3.7E-52 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS12780 be4a9fb86cb36e16ac370d4325fc32e6 274 PIRSF PIRSF000094 2 267 1.6E-107 T 20-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMC99_RS12780 be4a9fb86cb36e16ac370d4325fc32e6 274 Gene3D G3DSA:3.40.50.720 7 208 7.8E-66 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS00145 4fdd86837d420399561611d8bf9fc5c3 1415 PANTHER PTHR12706 206 452 5.2E-195 T 20-04-2016 IPR026741 Protein strawberry notch GO:0006355 AMC99_RS00145 4fdd86837d420399561611d8bf9fc5c3 1415 PANTHER PTHR12706 471 1175 5.2E-195 T 20-04-2016 IPR026741 Protein strawberry notch GO:0006355 AMC99_RS00145 4fdd86837d420399561611d8bf9fc5c3 1415 SUPERFAMILY SSF52540 421 670 3.9E-15 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00145 4fdd86837d420399561611d8bf9fc5c3 1415 Pfam PF13871 C-terminal domain on Strawberry notch homologue 888 1141 2.8E-88 T 20-04-2016 IPR026937 Strawberry notch, helicase C domain AMC99_RS00145 4fdd86837d420399561611d8bf9fc5c3 1415 Gene3D G3DSA:3.40.50.300 476 632 2.8E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00145 4fdd86837d420399561611d8bf9fc5c3 1415 Pfam PF13872 P-loop containing NTP hydrolase pore-1 397 714 1.4E-112 T 20-04-2016 AMC99_RS00145 4fdd86837d420399561611d8bf9fc5c3 1415 SUPERFAMILY SSF53335 117 289 1.23E-11 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS06385 2b4f42ab0255e4d957ff4ba191905c16 244 PIRSF PIRSF029730 2 243 5.9E-69 T 20-04-2016 IPR011227 Uncharacterised conserved protein UCP029730 AMC99_RS06385 2b4f42ab0255e4d957ff4ba191905c16 244 Pfam PF05013 N-formylglutamate amidohydrolase 19 216 4.9E-35 T 20-04-2016 IPR007709 N-formylglutamate amidohydrolase AMC99_RS06385 2b4f42ab0255e4d957ff4ba191905c16 244 SUPERFAMILY SSF53187 4 235 6.59E-58 T 20-04-2016 AMC99_RS06385 2b4f42ab0255e4d957ff4ba191905c16 244 Gene3D G3DSA:3.40.630.40 12 234 1.7E-61 T 20-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMC99_RS01260 bae0a626e69caad73cd33d5c7a2850da 181 Pfam PF10067 Predicted membrane protein (DUF2306) 62 156 3.1E-8 T 20-04-2016 IPR018750 Protein of unknown function DUF2306, membrane AMC99_RS10085 792fad095037590b4312cf80ae6517f6 149 SMART SM00260 2 138 2.9E-5 T 20-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMC99_RS10085 792fad095037590b4312cf80ae6517f6 149 Pfam PF01584 CheW-like domain 5 138 5.9E-20 T 20-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMC99_RS10085 792fad095037590b4312cf80ae6517f6 149 SUPERFAMILY SSF50341 5 139 7.06E-22 T 20-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMC99_RS10250 dcb5ea8cab5559d52601af4311ab9275 477 Gene3D G3DSA:3.90.550.10 67 353 8.1E-42 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS10250 dcb5ea8cab5559d52601af4311ab9275 477 SUPERFAMILY SSF53448 54 118 7.8E-46 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS10250 dcb5ea8cab5559d52601af4311ab9275 477 SUPERFAMILY SSF53448 154 370 7.8E-46 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS10250 dcb5ea8cab5559d52601af4311ab9275 477 Pfam PF13641 Glycosyltransferase like family 2 67 335 1.3E-19 T 20-04-2016 AMC99_RS10250 dcb5ea8cab5559d52601af4311ab9275 477 PANTHER PTHR10859 51 119 1.4E-35 T 20-04-2016 AMC99_RS10250 dcb5ea8cab5559d52601af4311ab9275 477 PANTHER PTHR10859 141 197 1.4E-35 T 20-04-2016 AMC99_RS10250 dcb5ea8cab5559d52601af4311ab9275 477 PANTHER PTHR10859 213 461 1.4E-35 T 20-04-2016 AMC99_RS10250 dcb5ea8cab5559d52601af4311ab9275 477 PANTHER PTHR10859:SF92 51 119 1.4E-35 T 20-04-2016 AMC99_RS10250 dcb5ea8cab5559d52601af4311ab9275 477 PANTHER PTHR10859:SF92 141 197 1.4E-35 T 20-04-2016 AMC99_RS10250 dcb5ea8cab5559d52601af4311ab9275 477 PANTHER PTHR10859:SF92 213 461 1.4E-35 T 20-04-2016 AMC99_RS09475 c2c35efdf486ea881ecafdb6866a8bfe 482 Pfam PF01935 Domain of unknown function DUF87 6 72 2.3E-9 T 20-04-2016 IPR002789 Helicase HerA, central domain AMC99_RS09475 c2c35efdf486ea881ecafdb6866a8bfe 482 SUPERFAMILY SSF52540 4 254 6.68E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09475 c2c35efdf486ea881ecafdb6866a8bfe 482 Gene3D G3DSA:3.40.50.300 6 255 1.8E-32 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09475 c2c35efdf486ea881ecafdb6866a8bfe 482 SMART SM00382 24 214 0.0017 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS09475 c2c35efdf486ea881ecafdb6866a8bfe 482 PIRSF PIRSF034081 1 482 7.5E-180 T 20-04-2016 IPR014588 ATPase, Atu1862 type, predicted AMC99_RS02475 7c7ca026c76c0fce49db3bb146c2e274 230 Gene3D G3DSA:3.30.420.10 42 221 5.2E-38 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS02475 7c7ca026c76c0fce49db3bb146c2e274 230 SUPERFAMILY SSF53098 39 216 1.14E-36 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMC99_RS02475 7c7ca026c76c0fce49db3bb146c2e274 230 SMART SM00479 48 219 3.0E-19 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMC99_RS02475 7c7ca026c76c0fce49db3bb146c2e274 230 PANTHER PTHR30231 11 215 4.3E-37 T 20-04-2016 AMC99_RS02475 7c7ca026c76c0fce49db3bb146c2e274 230 Pfam PF00929 Exonuclease 51 209 1.7E-18 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMC99_RS02475 7c7ca026c76c0fce49db3bb146c2e274 230 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 50 217 2.8E-22 T 20-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS06220 433e4f5de625b78436b033dc126ac024 930 Pfam PF00575 S1 RNA binding domain 37 82 3.8E-5 T 20-04-2016 IPR003029 S1 domain GO:0003676 AMC99_RS06220 433e4f5de625b78436b033dc126ac024 930 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 548 3.1E-156 T 20-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AMC99_RS06220 433e4f5de625b78436b033dc126ac024 930 PANTHER PTHR30001 1 113 2.3E-233 T 20-04-2016 AMC99_RS06220 433e4f5de625b78436b033dc126ac024 930 PANTHER PTHR30001 195 907 2.3E-233 T 20-04-2016 AMC99_RS06220 433e4f5de625b78436b033dc126ac024 930 Hamap MF_00970 Ribonuclease E [rne]. 2 927 29.746 T 20-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AMC99_RS06220 433e4f5de625b78436b033dc126ac024 930 PANTHER PTHR30001:SF1 1 113 2.3E-233 T 20-04-2016 AMC99_RS06220 433e4f5de625b78436b033dc126ac024 930 PANTHER PTHR30001:SF1 195 907 2.3E-233 T 20-04-2016 AMC99_RS06220 433e4f5de625b78436b033dc126ac024 930 Pfam PF10150 Ribonuclease E/G family 250 520 6.7E-94 T 20-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AMC99_RS06220 433e4f5de625b78436b033dc126ac024 930 SUPERFAMILY SSF50249 210 254 4.33E-16 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06220 433e4f5de625b78436b033dc126ac024 930 SUPERFAMILY SSF50249 40 81 4.33E-16 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06220 433e4f5de625b78436b033dc126ac024 930 Gene3D G3DSA:2.40.50.140 212 254 1.2E-40 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06220 433e4f5de625b78436b033dc126ac024 930 Gene3D G3DSA:2.40.50.140 31 83 1.2E-40 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS02935 33a6688d71be3605ef73d197b01ac073 251 SUPERFAMILY SSF75217 82 247 5.23E-44 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases AMC99_RS02935 33a6688d71be3605ef73d197b01ac073 251 SUPERFAMILY SSF88697 12 79 1.62E-14 T 20-04-2016 IPR015947 PUA-like domain AMC99_RS02935 33a6688d71be3605ef73d197b01ac073 251 Gene3D G3DSA:3.40.1280.10 12 248 1.6E-72 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMC99_RS02935 33a6688d71be3605ef73d197b01ac073 251 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 16 243 7.0E-38 T 20-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS02935 33a6688d71be3605ef73d197b01ac073 251 PANTHER PTHR30027:SF3 11 250 1.1E-57 T 20-04-2016 AMC99_RS02935 33a6688d71be3605ef73d197b01ac073 251 Pfam PF04452 RNA methyltransferase 27 241 6.1E-54 T 20-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS02935 33a6688d71be3605ef73d197b01ac073 251 PANTHER PTHR30027 11 250 1.1E-57 T 20-04-2016 AMC99_RS02935 33a6688d71be3605ef73d197b01ac073 251 PIRSF PIRSF015601 11 247 1.5E-58 T 20-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS01920 8ea09a162d0d6052955b192a3c72851f 211 SUPERFAMILY SSF143081 5 199 5.62E-23 T 20-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMC99_RS01920 8ea09a162d0d6052955b192a3c72851f 211 Gene3D G3DSA:3.90.1680.10 9 194 3.6E-11 T 20-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMC99_RS01920 8ea09a162d0d6052955b192a3c72851f 211 Pfam PF02586 SOS response associated peptidase (SRAP) 31 190 1.5E-7 T 20-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMC99_RS04125 ff9c4b891274ce90465ce9d97054c106 271 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 32 155 4.6E-39 T 20-04-2016 IPR007621 TPM domain AMC99_RS04125 ff9c4b891274ce90465ce9d97054c106 271 PANTHER PTHR30373:SF2 4 271 6.2E-42 T 20-04-2016 AMC99_RS04125 ff9c4b891274ce90465ce9d97054c106 271 PANTHER PTHR30373 4 271 6.2E-42 T 20-04-2016 AMC99_RS10830 9fdf2f04ed66f2027658a912342f1b6f 431 Pfam PF13520 Amino acid permease 9 408 2.5E-52 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS10830 9fdf2f04ed66f2027658a912342f1b6f 431 PANTHER PTHR11785 6 415 9.9E-78 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS10830 9fdf2f04ed66f2027658a912342f1b6f 431 PANTHER PTHR11785:SF259 6 415 9.9E-78 T 20-04-2016 AMC99_RS10830 9fdf2f04ed66f2027658a912342f1b6f 431 PIRSF PIRSF006060 2 424 5.6E-58 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS09660 5a39117b42734dddbf4a6ecf6b85db3e 454 Pfam PF13641 Glycosyltransferase like family 2 55 301 1.3E-33 T 20-04-2016 AMC99_RS09660 5a39117b42734dddbf4a6ecf6b85db3e 454 SUPERFAMILY SSF53448 56 303 7.13E-13 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS00985 5d45c79f0c86b15b2d9cea225a4cfee2 114 PANTHER PTHR34476 2 90 1.5E-19 T 20-04-2016 AMC99_RS00985 5d45c79f0c86b15b2d9cea225a4cfee2 114 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 16.384 T 20-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS00985 5d45c79f0c86b15b2d9cea225a4cfee2 114 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 57 2.5E-18 T 20-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS00985 5d45c79f0c86b15b2d9cea225a4cfee2 114 Pfam PF01192 RNA polymerase Rpb6 8 58 9.5E-14 T 20-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS00985 5d45c79f0c86b15b2d9cea225a4cfee2 114 Gene3D G3DSA:3.90.940.10 1 65 1.6E-11 T 20-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS00985 5d45c79f0c86b15b2d9cea225a4cfee2 114 SUPERFAMILY SSF63562 1 79 4.32E-21 T 20-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS00985 5d45c79f0c86b15b2d9cea225a4cfee2 114 SMART SM01409 8 60 5.9E-15 T 20-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_RS13535 63a7c7d2bb5b64caef96784c2f8816fe 649 Gene3D G3DSA:2.30.42.10 545 620 9.2E-6 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS13535 63a7c7d2bb5b64caef96784c2f8816fe 649 SUPERFAMILY SSF55486 251 509 3.41E-5 T 20-04-2016 AMC99_RS13535 63a7c7d2bb5b64caef96784c2f8816fe 649 Pfam PF05299 M61 glycyl aminopeptidase 323 439 8.2E-34 T 20-04-2016 IPR007963 Peptidase M61, catalytic domain AMC99_RS13535 63a7c7d2bb5b64caef96784c2f8816fe 649 SUPERFAMILY SSF50156 540 619 4.29E-9 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS13535 63a7c7d2bb5b64caef96784c2f8816fe 649 PIRSF PIRSF016493 53 646 5.5E-120 T 20-04-2016 IPR024191 Peptidase M61 AMC99_RS08365 6fbefe5f78d0bbfc9246568c73183747 519 PANTHER PTHR30005:SF0 21 319 3.5E-61 T 20-04-2016 AMC99_RS08365 6fbefe5f78d0bbfc9246568c73183747 519 SUPERFAMILY SSF53067 143 312 4.79E-31 T 20-04-2016 AMC99_RS08365 6fbefe5f78d0bbfc9246568c73183747 519 PANTHER PTHR30005 21 319 3.5E-61 T 20-04-2016 AMC99_RS08365 6fbefe5f78d0bbfc9246568c73183747 519 Gene3D G3DSA:3.30.420.150 143 311 1.9E-28 T 20-04-2016 AMC99_RS08365 6fbefe5f78d0bbfc9246568c73183747 519 Pfam PF02541 Ppx/GppA phosphatase family 41 311 6.5E-47 T 20-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 AMC99_RS08365 6fbefe5f78d0bbfc9246568c73183747 519 Gene3D G3DSA:3.30.420.40 19 137 3.4E-35 T 20-04-2016 AMC99_RS08365 6fbefe5f78d0bbfc9246568c73183747 519 SUPERFAMILY SSF53067 21 139 1.78E-30 T 20-04-2016 AMC99_RS08505 7215b56ee940a3b01ccb5c4a1664b00c 231 SUPERFAMILY SSF53681 2 116 5.01E-28 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS08505 7215b56ee940a3b01ccb5c4a1664b00c 231 TIGRFAM TIGR00035 asp_race: aspartate racemase 3 230 1.4E-49 T 20-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AMC99_RS08505 7215b56ee940a3b01ccb5c4a1664b00c 231 SUPERFAMILY SSF53681 120 228 2.94E-25 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS08505 7215b56ee940a3b01ccb5c4a1664b00c 231 Gene3D G3DSA:3.40.50.1860 2 113 1.5E-30 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS08505 7215b56ee940a3b01ccb5c4a1664b00c 231 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 1.1E-47 T 20-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS08505 7215b56ee940a3b01ccb5c4a1664b00c 231 Gene3D G3DSA:3.40.50.1860 114 215 4.6E-21 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMC99_RS08505 7215b56ee940a3b01ccb5c4a1664b00c 231 PANTHER PTHR21198 4 227 8.4E-47 T 20-04-2016 AMC99_RS08505 7215b56ee940a3b01ccb5c4a1664b00c 231 PANTHER PTHR21198:SF7 4 227 8.4E-47 T 20-04-2016 AMC99_RS07025 df7fa90658e2ce8f69ae6ded74a30818 224 Gene3D G3DSA:3.20.20.70 3 222 2.1E-71 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS07025 df7fa90658e2ce8f69ae6ded74a30818 224 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 220 1.4E-45 T 20-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS07025 df7fa90658e2ce8f69ae6ded74a30818 224 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 224 31.204 T 20-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS07025 df7fa90658e2ce8f69ae6ded74a30818 224 SMART SM00934 4 220 4.5E-83 T 20-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS07025 df7fa90658e2ce8f69ae6ded74a30818 224 PANTHER PTHR32119 1 222 5.4E-78 T 20-04-2016 AMC99_RS07025 df7fa90658e2ce8f69ae6ded74a30818 224 PANTHER PTHR32119:SF2 1 222 5.4E-78 T 20-04-2016 AMC99_RS07025 df7fa90658e2ce8f69ae6ded74a30818 224 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 20-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS07025 df7fa90658e2ce8f69ae6ded74a30818 224 SUPERFAMILY SSF51366 2 222 6.77E-66 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMC99_RS07025 df7fa90658e2ce8f69ae6ded74a30818 224 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 7 220 3.3E-49 T 20-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 Pfam PF00990 Diguanylate cyclase, GGDEF domain 356 511 3.1E-45 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 SUPERFAMILY SSF141868 534 777 3.4E-83 T 20-04-2016 IPR001633 EAL domain AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 PANTHER PTHR10799:SF774 389 627 3.7E-83 T 20-04-2016 AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 PANTHER PTHR10799:SF774 119 258 3.7E-83 T 20-04-2016 AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 SMART SM00052 527 770 3.1E-106 T 20-04-2016 IPR001633 EAL domain AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 SUPERFAMILY SSF55785 233 347 1.15E-15 T 20-04-2016 IPR000014 PAS domain AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 Gene3D G3DSA:3.30.70.270 358 521 2.4E-51 T 20-04-2016 AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 355 513 4.1E-39 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 227 351 7.1E-12 T 20-04-2016 IPR000014 PAS domain AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 PANTHER PTHR10799 389 627 3.7E-83 T 20-04-2016 AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 PANTHER PTHR10799 119 258 3.7E-83 T 20-04-2016 AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 Pfam PF08448 PAS fold 237 347 5.9E-11 T 20-04-2016 IPR013656 PAS fold-4 AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 Pfam PF00563 EAL domain 534 765 2.7E-68 T 20-04-2016 IPR001633 EAL domain AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 SMART SM00267 345 517 2.6E-57 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 SUPERFAMILY SSF55073 361 514 1.8E-44 T 20-04-2016 IPR029787 Nucleotide cyclase AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 Gene3D G3DSA:3.20.20.450 530 777 1.9E-90 T 20-04-2016 IPR001633 EAL domain AMC99_RS08425 56d42e5dcbaa21e1c1584f39affdb76a 784 Gene3D G3DSA:3.30.450.20 237 344 3.5E-15 T 20-04-2016 AMC99_RS07975 307b0909e2bf6929bd220dfa7350e8bb 141 Gene3D G3DSA:1.10.1660.10 15 106 2.8E-15 T 20-04-2016 AMC99_RS07975 307b0909e2bf6929bd220dfa7350e8bb 141 PANTHER PTHR30204 6 82 1.4E-17 T 20-04-2016 AMC99_RS07975 307b0909e2bf6929bd220dfa7350e8bb 141 SUPERFAMILY SSF46955 15 82 1.24E-15 T 20-04-2016 IPR009061 Putative DNA-binding domain AMC99_RS07975 307b0909e2bf6929bd220dfa7350e8bb 141 SMART SM00422 15 84 1.5E-4 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_RS07975 307b0909e2bf6929bd220dfa7350e8bb 141 PANTHER PTHR30204:SF15 6 82 1.4E-17 T 20-04-2016 AMC99_RS07975 307b0909e2bf6929bd220dfa7350e8bb 141 Pfam PF13411 MerR HTH family regulatory protein 15 82 5.4E-22 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_RS11145 e1c221c5c82ffbb0b0e08ec755489200 80 PANTHER PTHR12962:SF1 1 80 9.4E-16 T 20-04-2016 AMC99_RS11145 e1c221c5c82ffbb0b0e08ec755489200 80 PIRSF PIRSF002599 4 80 2.2E-12 T 20-04-2016 IPR012156 Cold shock, CspA GO:0003676 AMC99_RS11145 e1c221c5c82ffbb0b0e08ec755489200 80 Pfam PF06961 Protein of unknown function (DUF1294) 13 67 2.1E-22 T 20-04-2016 IPR010718 Protein of unknown function DUF1294 AMC99_RS11145 e1c221c5c82ffbb0b0e08ec755489200 80 PANTHER PTHR12962 1 80 9.4E-16 T 20-04-2016 AMC99_RS00165 d8d1d6fac244788739d4812d536225a6 265 Pfam PF06114 Domain of unknown function (DUF955) 28 148 1.3E-12 T 20-04-2016 IPR010359 HTH domain, IrrE-type AMC99_RS01630 924dcd8d892706dff6dbbdfb8c8404a2 349 PANTHER PTHR21091:SF112 1 345 5.2E-131 T 20-04-2016 AMC99_RS01630 924dcd8d892706dff6dbbdfb8c8404a2 349 SUPERFAMILY SSF82282 6 348 9.16E-97 T 20-04-2016 IPR003726 Homocysteine-binding domain AMC99_RS01630 924dcd8d892706dff6dbbdfb8c8404a2 349 PANTHER PTHR21091 1 345 5.2E-131 T 20-04-2016 AMC99_RS01630 924dcd8d892706dff6dbbdfb8c8404a2 349 Gene3D G3DSA:3.20.20.330 2 347 3.5E-106 T 20-04-2016 IPR003726 Homocysteine-binding domain AMC99_RS01630 924dcd8d892706dff6dbbdfb8c8404a2 349 Pfam PF02574 Homocysteine S-methyltransferase 16 321 2.3E-82 T 20-04-2016 IPR003726 Homocysteine-binding domain AMC99_RS00600 642c78018b0dbbdc6832add7a1cfe75e 144 Pfam PF02082 Transcriptional regulator 1 80 4.9E-23 T 20-04-2016 IPR000944 Transcription regulator Rrf2-type AMC99_RS00600 642c78018b0dbbdc6832add7a1cfe75e 144 Gene3D G3DSA:1.10.10.10 1 134 3.9E-41 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS00600 642c78018b0dbbdc6832add7a1cfe75e 144 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 129 9.9E-31 T 20-04-2016 IPR000944 Transcription regulator Rrf2-type AMC99_RS00600 642c78018b0dbbdc6832add7a1cfe75e 144 PANTHER PTHR33221:SF4 2 139 1.6E-40 T 20-04-2016 AMC99_RS00600 642c78018b0dbbdc6832add7a1cfe75e 144 PANTHER PTHR33221 2 139 1.6E-40 T 20-04-2016 AMC99_RS00600 642c78018b0dbbdc6832add7a1cfe75e 144 SUPERFAMILY SSF46785 3 132 4.9E-31 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS08835 70995eb5985a6a0067cf94a0f9640f6b 368 Pfam PF13393 Histidyl-tRNA synthetase 11 307 1.0E-79 T 20-04-2016 AMC99_RS08835 70995eb5985a6a0067cf94a0f9640f6b 368 PIRSF PIRSF001549 7 314 7.1E-31 T 20-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AMC99_RS08835 70995eb5985a6a0067cf94a0f9640f6b 368 PANTHER PTHR11476:SF5 9 307 7.7E-22 T 20-04-2016 AMC99_RS08835 70995eb5985a6a0067cf94a0f9640f6b 368 SUPERFAMILY SSF55681 8 308 1.19E-37 T 20-04-2016 AMC99_RS08835 70995eb5985a6a0067cf94a0f9640f6b 368 Gene3D G3DSA:3.30.930.10 20 307 1.5E-39 T 20-04-2016 AMC99_RS08835 70995eb5985a6a0067cf94a0f9640f6b 368 PANTHER PTHR11476 9 307 7.7E-22 T 20-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AMC99_RS13580 9e06bc27f3ed0490363baaaac48b3a62 219 SMART SM00882 11 208 2.8E-76 T 20-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AMC99_RS13580 9e06bc27f3ed0490363baaaac48b3a62 219 Pfam PF01144 Coenzyme A transferase 12 206 3.0E-38 T 20-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AMC99_RS13580 9e06bc27f3ed0490363baaaac48b3a62 219 PANTHER PTHR13707 8 217 9.5E-122 T 20-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AMC99_RS13580 9e06bc27f3ed0490363baaaac48b3a62 219 Gene3D G3DSA:3.40.810.20 8 217 7.8E-91 T 20-04-2016 AMC99_RS13580 9e06bc27f3ed0490363baaaac48b3a62 219 SUPERFAMILY SSF100950 8 216 3.45E-72 T 20-04-2016 AMC99_RS13580 9e06bc27f3ed0490363baaaac48b3a62 219 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 8 215 2.0E-96 T 20-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 AMC99_RS02730 41bbefefc9fedf2e2b3899a5f21c1316 133 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 130 3.5E-24 T 20-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMC99_RS02730 41bbefefc9fedf2e2b3899a5f21c1316 133 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 129 1.3E-17 T 20-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMC99_RS02730 41bbefefc9fedf2e2b3899a5f21c1316 133 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 106 4.7E-14 T 20-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMC99_RS02730 41bbefefc9fedf2e2b3899a5f21c1316 133 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 100 2.0E-45 T 20-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMC99_RS02730 41bbefefc9fedf2e2b3899a5f21c1316 133 Gene3D G3DSA:3.90.470.20 1 129 4.6E-34 T 20-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMC99_RS02730 41bbefefc9fedf2e2b3899a5f21c1316 133 SUPERFAMILY SSF56214 1 129 1.57E-24 T 20-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMC99_RS02730 41bbefefc9fedf2e2b3899a5f21c1316 133 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 130 22.754 T 20-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMC99_RS04300 54598b9df298cbe91761b8e2a0dbcd6a 259 Pfam PF13350 Tyrosine phosphatase family 8 258 8.1E-58 T 20-04-2016 IPR026893 Tyrosine/serine-protein phosphatase IphP-type AMC99_RS04300 54598b9df298cbe91761b8e2a0dbcd6a 259 PANTHER PTHR31126:SF21 1 86 2.0E-35 T 20-04-2016 AMC99_RS04300 54598b9df298cbe91761b8e2a0dbcd6a 259 PANTHER PTHR31126:SF21 124 189 2.0E-35 T 20-04-2016 AMC99_RS04300 54598b9df298cbe91761b8e2a0dbcd6a 259 PANTHER PTHR31126:SF21 210 258 2.0E-35 T 20-04-2016 AMC99_RS04300 54598b9df298cbe91761b8e2a0dbcd6a 259 SUPERFAMILY SSF52799 7 257 1.13E-52 T 20-04-2016 IPR029021 Protein-tyrosine phosphatase-like AMC99_RS04300 54598b9df298cbe91761b8e2a0dbcd6a 259 Gene3D G3DSA:3.90.190.10 9 181 1.5E-19 T 20-04-2016 IPR029021 Protein-tyrosine phosphatase-like AMC99_RS04300 54598b9df298cbe91761b8e2a0dbcd6a 259 PANTHER PTHR31126 1 86 2.0E-35 T 20-04-2016 AMC99_RS04300 54598b9df298cbe91761b8e2a0dbcd6a 259 PANTHER PTHR31126 124 189 2.0E-35 T 20-04-2016 AMC99_RS04300 54598b9df298cbe91761b8e2a0dbcd6a 259 PANTHER PTHR31126 210 258 2.0E-35 T 20-04-2016 AMC99_RS04300 54598b9df298cbe91761b8e2a0dbcd6a 259 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 146 156 - T 20-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 AMC99_RS01785 31551b284f7f695d94461ff581eb8489 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 257 1.9E-30 T 20-04-2016 AMC99_RS01785 31551b284f7f695d94461ff581eb8489 264 PANTHER PTHR24322 167 203 7.2E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS01785 31551b284f7f695d94461ff581eb8489 264 PANTHER PTHR24322 11 151 7.2E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS01785 31551b284f7f695d94461ff581eb8489 264 SUPERFAMILY SSF51735 8 261 9.69E-45 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS01785 31551b284f7f695d94461ff581eb8489 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 7.8E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS01785 31551b284f7f695d94461ff581eb8489 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 7.8E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS01785 31551b284f7f695d94461ff581eb8489 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 7.8E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS01785 31551b284f7f695d94461ff581eb8489 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 7.8E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS01785 31551b284f7f695d94461ff581eb8489 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.8E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS01785 31551b284f7f695d94461ff581eb8489 264 PANTHER PTHR24322:SF356 167 203 7.2E-23 T 20-04-2016 AMC99_RS01785 31551b284f7f695d94461ff581eb8489 264 PANTHER PTHR24322:SF356 11 151 7.2E-23 T 20-04-2016 AMC99_RS01785 31551b284f7f695d94461ff581eb8489 264 Gene3D G3DSA:3.40.50.720 5 260 4.2E-49 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS01785 31551b284f7f695d94461ff581eb8489 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS02540 535c7becac69598007b7f81c9e9cd34e 938 Pfam PF00593 TonB dependent receptor 466 568 8.4E-5 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02540 535c7becac69598007b7f81c9e9cd34e 938 SUPERFAMILY SSF56935 523 569 2.3E-32 T 20-04-2016 AMC99_RS02540 535c7becac69598007b7f81c9e9cd34e 938 SUPERFAMILY SSF56935 34 204 2.3E-32 T 20-04-2016 AMC99_RS02540 535c7becac69598007b7f81c9e9cd34e 938 SUPERFAMILY SSF56935 235 494 2.3E-32 T 20-04-2016 AMC99_RS02540 535c7becac69598007b7f81c9e9cd34e 938 Gene3D G3DSA:2.40.170.20 148 637 9.5E-40 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02540 535c7becac69598007b7f81c9e9cd34e 938 Gene3D G3DSA:2.40.170.20 820 905 9.5E-40 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS02540 535c7becac69598007b7f81c9e9cd34e 938 Gene3D G3DSA:2.170.130.10 42 130 1.0E-6 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS02540 535c7becac69598007b7f81c9e9cd34e 938 SUPERFAMILY SSF56935 817 935 2.09E-5 T 20-04-2016 AMC99_RS10505 1ad916186e3216eef56b627f39317f3c 528 PANTHER PTHR10566:SF10 8 430 3.8E-104 T 20-04-2016 AMC99_RS10505 1ad916186e3216eef56b627f39317f3c 528 PANTHER PTHR10566 8 430 3.8E-104 T 20-04-2016 AMC99_RS10505 1ad916186e3216eef56b627f39317f3c 528 Gene3D G3DSA:3.90.1200.10 257 306 9.8E-7 T 20-04-2016 AMC99_RS10505 1ad916186e3216eef56b627f39317f3c 528 Pfam PF03109 ABC1 family 110 216 6.6E-26 T 20-04-2016 IPR004147 UbiB domain AMC99_RS10505 1ad916186e3216eef56b627f39317f3c 528 SUPERFAMILY SSF56112 189 417 1.53E-23 T 20-04-2016 IPR011009 Protein kinase-like domain AMC99_RS10505 1ad916186e3216eef56b627f39317f3c 528 SUPERFAMILY SSF56112 92 154 1.53E-23 T 20-04-2016 IPR011009 Protein kinase-like domain AMC99_RS13205 5484e3565d8d8d5cd42a00ac74ae2b32 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.0E-40 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_RS13205 5484e3565d8d8d5cd42a00ac74ae2b32 112 SMART SM00938 4 105 1.7E-59 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_RS13205 5484e3565d8d8d5cd42a00ac74ae2b32 112 PANTHER PTHR30115 1 112 2.7E-55 T 20-04-2016 AMC99_RS13205 5484e3565d8d8d5cd42a00ac74ae2b32 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 20-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AMC99_RS13205 5484e3565d8d8d5cd42a00ac74ae2b32 112 Gene3D G3DSA:3.30.70.120 1 112 7.8E-46 T 20-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMC99_RS13205 5484e3565d8d8d5cd42a00ac74ae2b32 112 PRINTS PR00340 P-II protein signature 83 103 1.9E-35 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_RS13205 5484e3565d8d8d5cd42a00ac74ae2b32 112 PRINTS PR00340 P-II protein signature 2 17 1.9E-35 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_RS13205 5484e3565d8d8d5cd42a00ac74ae2b32 112 PRINTS PR00340 P-II protein signature 52 75 1.9E-35 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_RS13205 5484e3565d8d8d5cd42a00ac74ae2b32 112 PRINTS PR00340 P-II protein signature 23 41 1.9E-35 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_RS13205 5484e3565d8d8d5cd42a00ac74ae2b32 112 SUPERFAMILY SSF54913 1 112 9.21E-42 T 20-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMC99_RS13205 5484e3565d8d8d5cd42a00ac74ae2b32 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 20-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AMC99_RS09330 3d99f2b7800939a434e91a9c04348e1a 83 PANTHER PTHR33162 2 78 1.7E-12 T 20-04-2016 AMC99_RS09330 3d99f2b7800939a434e91a9c04348e1a 83 Pfam PF02416 mttA/Hcf106 family 3 51 5.1E-11 T 20-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AMC99_RS09330 3d99f2b7800939a434e91a9c04348e1a 83 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 76 20.176 T 20-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AMC99_RS09330 3d99f2b7800939a434e91a9c04348e1a 83 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 2 46 4.1E-19 T 20-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AMC99_RS06465 ac34eec3db330eb2e21d7af9abf57c65 413 PANTHER PTHR30489 1 413 1.0E-70 T 20-04-2016 AMC99_RS06465 ac34eec3db330eb2e21d7af9abf57c65 413 Pfam PF12704 MacB-like periplasmic core domain 30 241 1.1E-14 T 20-04-2016 IPR025857 MacB-like periplasmic core domain AMC99_RS06465 ac34eec3db330eb2e21d7af9abf57c65 413 Pfam PF02687 FtsX-like permease family 274 406 5.9E-19 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMC99_RS06465 ac34eec3db330eb2e21d7af9abf57c65 413 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 2.5E-124 T 20-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AMC99_RS09625 6963cb47e98a1b3500f536efd5aa04bc 370 PANTHER PTHR30188 33 369 6.9E-103 T 20-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AMC99_RS09625 6963cb47e98a1b3500f536efd5aa04bc 370 PANTHER PTHR30188:SF3 33 369 6.9E-103 T 20-04-2016 AMC99_RS09625 6963cb47e98a1b3500f536efd5aa04bc 370 Pfam PF02405 Permease MlaE 153 362 2.1E-74 T 20-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AMC99_RS09625 6963cb47e98a1b3500f536efd5aa04bc 370 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 135 365 3.3E-71 T 20-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AMC99_RS05965 9873d9018c874c487b7bf5e15b08567a 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 110 124 2.2E-13 T 20-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_RS05965 9873d9018c874c487b7bf5e15b08567a 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 41 49 2.2E-13 T 20-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_RS05965 9873d9018c874c487b7bf5e15b08567a 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 67 78 2.2E-13 T 20-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_RS05965 9873d9018c874c487b7bf5e15b08567a 320 SUPERFAMILY SSF53474 4 299 2.52E-55 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS05965 9873d9018c874c487b7bf5e15b08567a 320 PIRSF PIRSF006431 3 319 5.9E-120 T 20-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AMC99_RS05965 9873d9018c874c487b7bf5e15b08567a 320 PANTHER PTHR10992:SF860 1 178 6.4E-100 T 20-04-2016 AMC99_RS05965 9873d9018c874c487b7bf5e15b08567a 320 PANTHER PTHR10992:SF860 214 315 6.4E-100 T 20-04-2016 AMC99_RS05965 9873d9018c874c487b7bf5e15b08567a 320 PANTHER PTHR10992 1 178 6.4E-100 T 20-04-2016 AMC99_RS05965 9873d9018c874c487b7bf5e15b08567a 320 PANTHER PTHR10992 214 315 6.4E-100 T 20-04-2016 AMC99_RS05965 9873d9018c874c487b7bf5e15b08567a 320 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 13 315 3.8E-109 T 20-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AMC99_RS05965 9873d9018c874c487b7bf5e15b08567a 320 Pfam PF00561 alpha/beta hydrolase fold 42 299 2.2E-23 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS05965 9873d9018c874c487b7bf5e15b08567a 320 Gene3D G3DSA:3.40.50.1820 8 299 1.4E-63 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS06505 a3c5afc3a254952411bc9f21b2488719 229 SUPERFAMILY SSF48317 36 226 1.09E-33 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMC99_RS06505 a3c5afc3a254952411bc9f21b2488719 229 SMART SM00014 104 217 7.0E-21 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMC99_RS06505 a3c5afc3a254952411bc9f21b2488719 229 PANTHER PTHR14969 62 219 1.9E-23 T 20-04-2016 AMC99_RS06505 a3c5afc3a254952411bc9f21b2488719 229 Gene3D G3DSA:1.20.144.10 39 222 2.5E-32 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMC99_RS06505 a3c5afc3a254952411bc9f21b2488719 229 Pfam PF01569 PAP2 superfamily 107 219 6.7E-23 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMC99_RS02235 80ce8649070e3371c78990035ce5dacb 105 Pfam PF08922 Domain of unknown function (DUF1905) 11 102 1.5E-18 T 20-04-2016 IPR015018 Protein of unknown function DUF1905 AMC99_RS02235 80ce8649070e3371c78990035ce5dacb 105 Gene3D G3DSA:2.40.30.100 50 103 1.2E-7 T 20-04-2016 AMC99_RS02235 80ce8649070e3371c78990035ce5dacb 105 SUPERFAMILY SSF141694 48 103 2.88E-9 T 20-04-2016 AMC99_RS01450 5338d5de12c31e5a12c4c6c57a322ca6 414 SUPERFAMILY SSF53067 214 402 2.59E-38 T 20-04-2016 AMC99_RS01450 5338d5de12c31e5a12c4c6c57a322ca6 414 Gene3D G3DSA:3.30.420.40 85 207 6.0E-43 T 20-04-2016 AMC99_RS01450 5338d5de12c31e5a12c4c6c57a322ca6 414 SUPERFAMILY SSF53067 90 207 8.29E-35 T 20-04-2016 AMC99_RS01450 5338d5de12c31e5a12c4c6c57a322ca6 414 Gene3D G3DSA:3.30.420.150 210 402 1.1E-54 T 20-04-2016 AMC99_RS01450 5338d5de12c31e5a12c4c6c57a322ca6 414 Pfam PF02541 Ppx/GppA phosphatase family 104 402 1.2E-49 T 20-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 AMC99_RS01450 5338d5de12c31e5a12c4c6c57a322ca6 414 PANTHER PTHR30005 68 413 1.0E-73 T 20-04-2016 AMC99_RS09340 878a2f0559963e1a8a70bc39df7525a3 263 Pfam PF02616 Segregation and condensation protein ScpA 44 259 1.6E-15 T 20-04-2016 IPR003768 Segregation and condensation protein A AMC99_RS09340 878a2f0559963e1a8a70bc39df7525a3 263 PANTHER PTHR33969 11 260 2.0E-45 T 20-04-2016 AMC99_RS09340 878a2f0559963e1a8a70bc39df7525a3 263 PANTHER PTHR33969:SF2 11 260 2.0E-45 T 20-04-2016 AMC99_RS13195 8361638ed4377975d30d093575d8e636 191 SUPERFAMILY SSF50475 8 132 1.44E-11 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMC99_RS13195 8361638ed4377975d30d093575d8e636 191 Gene3D G3DSA:2.30.110.10 5 127 9.4E-16 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMC99_RS13195 8361638ed4377975d30d093575d8e636 191 PANTHER PTHR39336 3 183 5.2E-55 T 20-04-2016 AMC99_RS13195 8361638ed4377975d30d093575d8e636 191 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 10 95 9.8E-10 T 20-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMC99_RS13195 8361638ed4377975d30d093575d8e636 191 PANTHER PTHR39336:SF2 3 183 5.2E-55 T 20-04-2016 AMC99_RS04095 eceb614ad44510820685ab7d99ae128f 230 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 52 213 1.4E-29 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain AMC99_RS04095 eceb614ad44510820685ab7d99ae128f 230 Gene3D G3DSA:3.40.50.1110 48 228 1.9E-50 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain AMC99_RS04095 eceb614ad44510820685ab7d99ae128f 230 SUPERFAMILY SSF52266 48 228 2.14E-47 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain AMC99_RS04095 eceb614ad44510820685ab7d99ae128f 230 PANTHER PTHR30383 50 230 7.1E-40 T 20-04-2016 AMC99_RS03075 c7edc6a66caee162a8f7e315cf8ee999 107 SUPERFAMILY SSF46785 8 102 9.1E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS03075 c7edc6a66caee162a8f7e315cf8ee999 107 Gene3D G3DSA:1.10.10.10 3 105 1.1E-26 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS03075 c7edc6a66caee162a8f7e315cf8ee999 107 PANTHER PTHR33154 3 102 6.4E-18 T 20-04-2016 AMC99_RS03075 c7edc6a66caee162a8f7e315cf8ee999 107 SMART SM00418 12 90 3.0E-15 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_RS03075 c7edc6a66caee162a8f7e315cf8ee999 107 Pfam PF12840 Helix-turn-helix domain 12 70 1.8E-11 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS04635 a93ad210c2305ab52bac281a51f8de54 106 Pfam PF00085 Thioredoxin 4 103 1.3E-34 T 20-04-2016 IPR013766 Thioredoxin domain GO:0045454 AMC99_RS04635 a93ad210c2305ab52bac281a51f8de54 106 PIRSF PIRSF000077 1 106 9.7E-40 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMC99_RS04635 a93ad210c2305ab52bac281a51f8de54 106 SUPERFAMILY SSF52833 3 104 1.19E-35 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS04635 a93ad210c2305ab52bac281a51f8de54 106 PRINTS PR00421 Thioredoxin family signature 30 39 8.8E-8 T 20-04-2016 AMC99_RS04635 a93ad210c2305ab52bac281a51f8de54 106 PRINTS PR00421 Thioredoxin family signature 70 81 8.8E-8 T 20-04-2016 AMC99_RS04635 a93ad210c2305ab52bac281a51f8de54 106 PRINTS PR00421 Thioredoxin family signature 22 30 8.8E-8 T 20-04-2016 AMC99_RS04635 a93ad210c2305ab52bac281a51f8de54 106 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 20-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 AMC99_RS04635 a93ad210c2305ab52bac281a51f8de54 106 PANTHER PTHR10438 4 103 2.6E-38 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMC99_RS04635 a93ad210c2305ab52bac281a51f8de54 106 Gene3D G3DSA:3.40.30.10 3 103 4.2E-36 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS04635 a93ad210c2305ab52bac281a51f8de54 106 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 103 2.9E-34 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMC99_RS09450 3a20668cad747f11caed8f52be1272b9 390 Pfam PF00108 Thiolase, N-terminal domain 5 260 1.0E-61 T 20-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AMC99_RS09450 3a20668cad747f11caed8f52be1272b9 390 PANTHER PTHR18919 1 390 1.4E-196 T 20-04-2016 AMC99_RS09450 3a20668cad747f11caed8f52be1272b9 390 PIRSF PIRSF000429 1 390 4.0E-113 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMC99_RS09450 3a20668cad747f11caed8f52be1272b9 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 388 2.5E-121 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMC99_RS09450 3a20668cad747f11caed8f52be1272b9 390 Pfam PF02803 Thiolase, C-terminal domain 267 388 8.8E-41 T 20-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AMC99_RS09450 3a20668cad747f11caed8f52be1272b9 390 PANTHER PTHR18919:SF71 1 390 1.4E-196 T 20-04-2016 AMC99_RS09450 3a20668cad747f11caed8f52be1272b9 390 Gene3D G3DSA:3.40.47.10 193 273 3.2E-58 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS09450 3a20668cad747f11caed8f52be1272b9 390 Gene3D G3DSA:3.40.47.10 4 125 3.2E-58 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS09450 3a20668cad747f11caed8f52be1272b9 390 Gene3D G3DSA:3.40.47.10 155 192 3.3E-50 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS09450 3a20668cad747f11caed8f52be1272b9 390 Gene3D G3DSA:3.40.47.10 274 389 3.3E-50 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS09450 3a20668cad747f11caed8f52be1272b9 390 SUPERFAMILY SSF53901 4 267 5.53E-67 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS09450 3a20668cad747f11caed8f52be1272b9 390 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 20-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AMC99_RS09450 3a20668cad747f11caed8f52be1272b9 390 SUPERFAMILY SSF53901 268 388 1.98E-39 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS07765 8f70ae2556727dae4b80d321c0de5238 359 Gene3D G3DSA:3.30.470.10 16 176 3.6E-66 T 20-04-2016 AMC99_RS07765 8f70ae2556727dae4b80d321c0de5238 359 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 46 358 1.5E-121 T 20-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 AMC99_RS07765 8f70ae2556727dae4b80d321c0de5238 359 SUPERFAMILY SSF56752 3 355 4.84E-111 T 20-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMC99_RS07765 8f70ae2556727dae4b80d321c0de5238 359 ProSitePatterns PS00770 Aminotransferases class-IV signature. 234 264 - T 20-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 AMC99_RS07765 8f70ae2556727dae4b80d321c0de5238 359 Gene3D G3DSA:3.20.10.10 177 345 1.4E-60 T 20-04-2016 AMC99_RS07765 8f70ae2556727dae4b80d321c0de5238 359 PANTHER PTHR11825:SF2 6 357 1.4E-136 T 20-04-2016 AMC99_RS07765 8f70ae2556727dae4b80d321c0de5238 359 Pfam PF01063 Amino-transferase class IV 72 313 9.9E-29 T 20-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMC99_RS07765 8f70ae2556727dae4b80d321c0de5238 359 PIRSF PIRSF006468 4 359 5.8E-123 T 20-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 AMC99_RS07765 8f70ae2556727dae4b80d321c0de5238 359 PANTHER PTHR11825 6 357 1.4E-136 T 20-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMC99_RS00040 b1ad77fe5c6f77d04cf92d6d398c85d9 449 Pfam PF07690 Major Facilitator Superfamily 29 396 6.9E-23 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS00040 b1ad77fe5c6f77d04cf92d6d398c85d9 449 SUPERFAMILY SSF103473 21 436 7.32E-39 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS00040 b1ad77fe5c6f77d04cf92d6d398c85d9 449 Gene3D G3DSA:1.20.1250.20 25 214 1.7E-21 T 20-04-2016 AMC99_RS00040 b1ad77fe5c6f77d04cf92d6d398c85d9 449 Gene3D G3DSA:1.20.1250.20 254 436 3.2E-7 T 20-04-2016 AMC99_RS00040 b1ad77fe5c6f77d04cf92d6d398c85d9 449 PANTHER PTHR12778 30 402 1.6E-25 T 20-04-2016 AMC99_RS12680 2e40bdb4d93323a2ff9c69ffd3fc7626 292 Pfam PF00483 Nucleotidyl transferase 5 240 9.3E-65 T 20-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMC99_RS12680 2e40bdb4d93323a2ff9c69ffd3fc7626 292 Gene3D G3DSA:3.90.550.10 4 267 5.0E-65 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS12680 2e40bdb4d93323a2ff9c69ffd3fc7626 292 PANTHER PTHR22572 5 270 4.5E-139 T 20-04-2016 AMC99_RS12680 2e40bdb4d93323a2ff9c69ffd3fc7626 292 PANTHER PTHR22572:SF105 5 270 4.5E-139 T 20-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 AMC99_RS12680 2e40bdb4d93323a2ff9c69ffd3fc7626 292 SUPERFAMILY SSF53448 4 289 7.21E-86 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS12680 2e40bdb4d93323a2ff9c69ffd3fc7626 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 289 4.1E-137 T 20-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 AMC99_RS03275 8fd3a8311c64886d1c925394eb7655b8 113 PIRSF PIRSF004555 1 111 8.7E-33 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMC99_RS03275 8fd3a8311c64886d1c925394eb7655b8 113 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 6 100 18.482 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMC99_RS03275 8fd3a8311c64886d1c925394eb7655b8 113 PANTHER PTHR33449:SF1 1 113 8.0E-36 T 20-04-2016 AMC99_RS03275 8fd3a8311c64886d1c925394eb7655b8 113 Gene3D G3DSA:3.30.1310.10 3 110 6.0E-37 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMC99_RS03275 8fd3a8311c64886d1c925394eb7655b8 113 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 7 107 6.7E-21 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMC99_RS03275 8fd3a8311c64886d1c925394eb7655b8 113 SUPERFAMILY SSF82607 13 105 2.62E-28 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMC99_RS03275 8fd3a8311c64886d1c925394eb7655b8 113 Pfam PF02575 YbaB/EbfC DNA-binding family 13 101 6.6E-28 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMC99_RS03275 8fd3a8311c64886d1c925394eb7655b8 113 PANTHER PTHR33449 1 113 8.0E-36 T 20-04-2016 AMC99_RS06585 2d440afcab59e3532638b68af2dece2c 276 PANTHER PTHR12035 19 239 3.2E-18 T 20-04-2016 AMC99_RS06585 2d440afcab59e3532638b68af2dece2c 276 PANTHER PTHR12035:SF58 19 239 3.2E-18 T 20-04-2016 AMC99_RS06585 2d440afcab59e3532638b68af2dece2c 276 Gene3D G3DSA:3.40.390.10 148 246 1.1E-4 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMC99_RS08540 d5de7171ea1b8ad3830d0138c4f724f0 472 SMART SM00382 170 341 1.9E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS08540 d5de7171ea1b8ad3830d0138c4f724f0 472 Pfam PF02954 Bacterial regulatory protein, Fis family 426 464 5.8E-12 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS08540 d5de7171ea1b8ad3830d0138c4f724f0 472 Gene3D G3DSA:3.40.50.300 146 321 9.3E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08540 d5de7171ea1b8ad3830d0138c4f724f0 472 Pfam PF00158 Sigma-54 interaction domain 150 316 3.0E-46 T 20-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMC99_RS08540 d5de7171ea1b8ad3830d0138c4f724f0 472 SUPERFAMILY SSF52172 9 194 9.68E-31 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS08540 d5de7171ea1b8ad3830d0138c4f724f0 472 SMART SM00448 7 121 3.9E-21 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS08540 d5de7171ea1b8ad3830d0138c4f724f0 472 Pfam PF00072 Response regulator receiver domain 10 121 4.5E-18 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS08540 d5de7171ea1b8ad3830d0138c4f724f0 472 PANTHER PTHR32071 9 469 2.5E-125 T 20-04-2016 AMC99_RS08540 d5de7171ea1b8ad3830d0138c4f724f0 472 Gene3D G3DSA:1.10.10.60 424 463 6.5E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS08540 d5de7171ea1b8ad3830d0138c4f724f0 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 3.4E-6 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS08540 d5de7171ea1b8ad3830d0138c4f724f0 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 3.4E-6 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_RS08540 d5de7171ea1b8ad3830d0138c4f724f0 472 Gene3D G3DSA:1.10.8.60 323 393 6.3E-22 T 20-04-2016 AMC99_RS08540 d5de7171ea1b8ad3830d0138c4f724f0 472 Gene3D G3DSA:3.40.50.2300 10 140 1.6E-26 T 20-04-2016 AMC99_RS08540 d5de7171ea1b8ad3830d0138c4f724f0 472 SUPERFAMILY SSF52540 150 392 2.24E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08540 d5de7171ea1b8ad3830d0138c4f724f0 472 SUPERFAMILY SSF46689 420 469 7.43E-13 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS01840 de139affb0f9b2269f9902702b91958b 365 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 167 182 - T 20-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 AMC99_RS01840 de139affb0f9b2269f9902702b91958b 365 Pfam PF00494 Squalene/phytoene synthase 50 312 6.8E-58 T 20-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 AMC99_RS01840 de139affb0f9b2269f9902702b91958b 365 Gene3D G3DSA:1.10.600.10 45 325 6.0E-71 T 20-04-2016 IPR008949 Isoprenoid synthase domain AMC99_RS01840 de139affb0f9b2269f9902702b91958b 365 SUPERFAMILY SSF48576 46 325 5.32E-73 T 20-04-2016 IPR008949 Isoprenoid synthase domain AMC99_RS01840 de139affb0f9b2269f9902702b91958b 365 PANTHER PTHR31480 42 339 7.2E-56 T 20-04-2016 AMC99_RS01840 de139affb0f9b2269f9902702b91958b 365 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 199 224 - T 20-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 AMC99_RS01840 de139affb0f9b2269f9902702b91958b 365 PANTHER PTHR31480:SF0 42 339 7.2E-56 T 20-04-2016 AMC99_RS03145 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 Gene3D G3DSA:2.40.50.100 74 150 3.4E-27 T 20-04-2016 AMC99_RS03145 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 4 150 1.4E-42 T 20-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMC99_RS03145 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 SUPERFAMILY SSF51230 77 150 2.36E-22 T 20-04-2016 IPR011053 Single hybrid motif AMC99_RS03145 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 97 111 1.1E-13 T 20-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMC99_RS03145 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 80 93 1.1E-13 T 20-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMC99_RS03145 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 112 125 1.1E-13 T 20-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMC99_RS03145 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 Pfam PF00364 Biotin-requiring enzyme 78 150 8.6E-22 T 20-04-2016 IPR000089 Biotin/lipoyl attachment AMC99_RS03145 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 107 124 - T 20-04-2016 IPR001882 Biotin-binding site AMC99_RS03145 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 PANTHER PTHR23151 1 150 8.7E-36 T 20-04-2016 AMC99_RS02970 c194d87e88f96208850e1c51c23b1e93 925 SUPERFAMILY SSF52540 656 670 2.15E-12 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02970 c194d87e88f96208850e1c51c23b1e93 925 SUPERFAMILY SSF52540 365 435 2.15E-12 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02970 c194d87e88f96208850e1c51c23b1e93 925 SUPERFAMILY SSF52540 224 272 2.15E-12 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02970 c194d87e88f96208850e1c51c23b1e93 925 SUPERFAMILY SSF52540 702 832 2.15E-12 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02970 c194d87e88f96208850e1c51c23b1e93 925 PANTHER PTHR11472:SF37 630 872 3.4E-52 T 20-04-2016 AMC99_RS02970 c194d87e88f96208850e1c51c23b1e93 925 Pfam PF13307 Helicase C-terminal domain 730 872 9.2E-18 T 20-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMC99_RS02970 c194d87e88f96208850e1c51c23b1e93 925 PANTHER PTHR11472 630 872 3.4E-52 T 20-04-2016 AMC99_RS02970 c194d87e88f96208850e1c51c23b1e93 925 SMART SM00491 746 882 1.5E-6 T 20-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMC99_RS02970 c194d87e88f96208850e1c51c23b1e93 925 Gene3D G3DSA:3.40.50.300 225 270 1.6E-10 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02970 c194d87e88f96208850e1c51c23b1e93 925 Gene3D G3DSA:3.40.50.300 350 432 1.6E-10 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02970 c194d87e88f96208850e1c51c23b1e93 925 Gene3D G3DSA:3.40.50.300 658 669 1.6E-10 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02970 c194d87e88f96208850e1c51c23b1e93 925 PANTHER PTHR11472 175 581 3.4E-52 T 20-04-2016 AMC99_RS02970 c194d87e88f96208850e1c51c23b1e93 925 Gene3D G3DSA:3.40.50.300 756 872 7.2E-4 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS02970 c194d87e88f96208850e1c51c23b1e93 925 PANTHER PTHR11472:SF37 175 581 3.4E-52 T 20-04-2016 AMC99_RS09510 12f8d2e491e7a94223a98602771708f0 149 Pfam PF03724 META domain 32 138 4.4E-11 T 20-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ AMC99_RS04920 8846252dc906950670f0168c5c91726b 536 SUPERFAMILY SSF56672 22 240 1.38E-32 T 20-04-2016 AMC99_RS04920 8846252dc906950670f0168c5c91726b 536 PANTHER PTHR35369:SF2 20 536 1.7E-75 T 20-04-2016 AMC99_RS04920 8846252dc906950670f0168c5c91726b 536 Pfam PF00817 impB/mucB/samB family 50 171 2.7E-5 T 20-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_RS04920 8846252dc906950670f0168c5c91726b 536 PANTHER PTHR35369 20 536 1.7E-75 T 20-04-2016 AMC99_RS02070 39190c88494a6160089e56db0312b9b1 379 Gene3D G3DSA:2.40.110.10 135 218 2.2E-15 T 20-04-2016 AMC99_RS02070 39190c88494a6160089e56db0312b9b1 379 SUPERFAMILY SSF47203 230 375 8.54E-38 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS02070 39190c88494a6160089e56db0312b9b1 379 SUPERFAMILY SSF56645 1 226 6.94E-44 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS02070 39190c88494a6160089e56db0312b9b1 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 205 5.8E-10 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS02070 39190c88494a6160089e56db0312b9b1 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 120 5.8E-21 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS02070 39190c88494a6160089e56db0312b9b1 379 Gene3D G3DSA:1.10.540.10 5 120 1.8E-21 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS02070 39190c88494a6160089e56db0312b9b1 379 PANTHER PTHR10909 1 375 1.5E-70 T 20-04-2016 AMC99_RS02070 39190c88494a6160089e56db0312b9b1 379 Gene3D G3DSA:1.20.140.10 219 375 1.0E-39 T 20-04-2016 AMC99_RS02070 39190c88494a6160089e56db0312b9b1 379 PANTHER PTHR10909:SF302 1 375 1.5E-70 T 20-04-2016 AMC99_RS02070 39190c88494a6160089e56db0312b9b1 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 375 1.0E-26 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS11445 dd8c308f16fb18d114658fb7c47820e4 55 SUPERFAMILY SSF57829 1 53 1.04E-17 T 20-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 AMC99_RS11445 dd8c308f16fb18d114658fb7c47820e4 55 PANTHER PTHR15238 1 55 1.1E-21 T 20-04-2016 AMC99_RS11445 dd8c308f16fb18d114658fb7c47820e4 55 Pfam PF00471 Ribosomal protein L33 7 53 5.5E-16 T 20-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS11445 dd8c308f16fb18d114658fb7c47820e4 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 12.847 T 20-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS11445 dd8c308f16fb18d114658fb7c47820e4 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 20-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS11445 dd8c308f16fb18d114658fb7c47820e4 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 7.6E-21 T 20-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS02040 d87cd26df714c9278cad1042eb4bd021 718 Pfam PF00082 Subtilase family 38 293 2.2E-34 T 20-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMC99_RS02040 d87cd26df714c9278cad1042eb4bd021 718 PANTHER PTHR10795:SF419 27 302 3.2E-37 T 20-04-2016 AMC99_RS02040 d87cd26df714c9278cad1042eb4bd021 718 Gene3D G3DSA:3.40.50.200 12 303 5.6E-67 T 20-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMC99_RS02040 d87cd26df714c9278cad1042eb4bd021 718 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 43 54 - T 20-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site AMC99_RS02040 d87cd26df714c9278cad1042eb4bd021 718 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 243 253 - T 20-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site AMC99_RS02040 d87cd26df714c9278cad1042eb4bd021 718 SUPERFAMILY SSF52743 22 302 3.4E-63 T 20-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMC99_RS02040 d87cd26df714c9278cad1042eb4bd021 718 PRINTS PR00723 Subtilisin serine protease family (S8) signature 76 89 3.9E-12 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related AMC99_RS02040 d87cd26df714c9278cad1042eb4bd021 718 PRINTS PR00723 Subtilisin serine protease family (S8) signature 242 258 3.9E-12 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related AMC99_RS02040 d87cd26df714c9278cad1042eb4bd021 718 PRINTS PR00723 Subtilisin serine protease family (S8) signature 38 57 3.9E-12 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related AMC99_RS02040 d87cd26df714c9278cad1042eb4bd021 718 PANTHER PTHR10795 27 302 3.2E-37 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related AMC99_RS10070 13fcc5a6b9f5b82f68deaece3894c08d 254 SUPERFAMILY SSF53639 14 221 2.94E-52 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMC99_RS10070 13fcc5a6b9f5b82f68deaece3894c08d 254 PANTHER PTHR10672 12 248 4.8E-75 T 20-04-2016 AMC99_RS10070 13fcc5a6b9f5b82f68deaece3894c08d 254 Gene3D G3DSA:3.40.225.10 14 225 4.4E-52 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMC99_RS10070 13fcc5a6b9f5b82f68deaece3894c08d 254 SMART SM01007 20 201 5.1E-48 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMC99_RS10070 13fcc5a6b9f5b82f68deaece3894c08d 254 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 21 201 4.6E-37 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMC99_RS03680 8da89e110ce6ce8cc18bd09062d01b68 422 Pfam PF02321 Outer membrane efflux protein 234 417 1.9E-24 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMC99_RS03680 8da89e110ce6ce8cc18bd09062d01b68 422 Pfam PF02321 Outer membrane efflux protein 25 214 2.9E-31 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMC99_RS03680 8da89e110ce6ce8cc18bd09062d01b68 422 PANTHER PTHR30026 1 420 2.5E-43 T 20-04-2016 AMC99_RS03680 8da89e110ce6ce8cc18bd09062d01b68 422 Gene3D G3DSA:1.20.1600.10 17 417 5.0E-70 T 20-04-2016 AMC99_RS03680 8da89e110ce6ce8cc18bd09062d01b68 422 SUPERFAMILY SSF56954 2 419 5.49E-78 T 20-04-2016 AMC99_RS04665 51327f9c88eca7adc4be8e9ceaedfa34 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 247 3.9E-25 T 20-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMC99_RS00235 e84921ffbfbce312d9ac20365203f031 88 Gene3D G3DSA:1.10.287.370 9 75 9.6E-4 T 20-04-2016 IPR009053 Prefoldin AMC99_RS03795 9f640097ae504ca867049e38ac659577 126 Pfam PF13686 DsrE/DsrF/DrsH-like family 56 118 1.7E-8 T 20-04-2016 IPR032836 DsrE/DsrF/DrsH-like family AMC99_RS03795 9f640097ae504ca867049e38ac659577 126 SUPERFAMILY SSF75169 4 120 5.49E-13 T 20-04-2016 IPR027396 DsrEFH-like AMC99_RS03795 9f640097ae504ca867049e38ac659577 126 Gene3D G3DSA:3.40.1260.10 2 121 9.5E-22 T 20-04-2016 IPR027396 DsrEFH-like AMC99_RS00730 998f0459f77feb35a523da68da73035a 211 PANTHER PTHR24567:SF28 66 207 1.4E-26 T 20-04-2016 AMC99_RS00730 998f0459f77feb35a523da68da73035a 211 SUPERFAMILY SSF51206 41 154 4.15E-8 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like AMC99_RS00730 998f0459f77feb35a523da68da73035a 211 Gene3D G3DSA:2.60.120.10 60 160 1.1E-5 T 20-04-2016 IPR014710 RmlC-like jelly roll fold AMC99_RS00730 998f0459f77feb35a523da68da73035a 211 Gene3D G3DSA:1.10.10.10 161 206 7.9E-12 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS00730 998f0459f77feb35a523da68da73035a 211 Pfam PF13545 Crp-like helix-turn-helix domain 159 206 3.1E-9 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_RS00730 998f0459f77feb35a523da68da73035a 211 PANTHER PTHR24567 66 207 1.4E-26 T 20-04-2016 AMC99_RS00730 998f0459f77feb35a523da68da73035a 211 SUPERFAMILY SSF46785 156 207 1.51E-8 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS00350 323476531f40cc2092abc66815c617c0 173 Pfam PF10502 Signal peptidase, peptidase S26 41 172 5.3E-18 T 20-04-2016 IPR019533 Peptidase S26 AMC99_RS00350 323476531f40cc2092abc66815c617c0 173 SUPERFAMILY SSF51306 42 173 6.8E-20 T 20-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AMC99_RS00350 323476531f40cc2092abc66815c617c0 173 Gene3D G3DSA:2.10.109.10 135 171 4.8E-9 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMC99_RS00350 323476531f40cc2092abc66815c617c0 173 Gene3D G3DSA:2.10.109.10 45 98 4.8E-9 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMC99_RS01690 9c82fbec197fe830d880533412d22b42 324 PANTHER PTHR10587 32 185 1.2E-13 T 20-04-2016 AMC99_RS01690 9c82fbec197fe830d880533412d22b42 324 PANTHER PTHR10587 213 268 1.2E-13 T 20-04-2016 AMC99_RS01690 9c82fbec197fe830d880533412d22b42 324 Gene3D G3DSA:3.20.20.370 30 267 1.3E-26 T 20-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_RS01690 9c82fbec197fe830d880533412d22b42 324 Pfam PF01522 Polysaccharide deacetylase 30 151 1.1E-18 T 20-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_RS01690 9c82fbec197fe830d880533412d22b42 324 SUPERFAMILY SSF88713 216 269 6.67E-30 T 20-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_RS01690 9c82fbec197fe830d880533412d22b42 324 SUPERFAMILY SSF88713 30 184 6.67E-30 T 20-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_RS01420 b18d3cb85932584f667df43a381a766f 324 Gene3D G3DSA:1.10.8.300 213 319 1.1E-35 T 20-04-2016 AMC99_RS01420 b18d3cb85932584f667df43a381a766f 324 PANTHER PTHR11603:SF149 2 324 1.1E-135 T 20-04-2016 AMC99_RS01420 b18d3cb85932584f667df43a381a766f 324 PIRSF PIRSF002849 1 324 1.9E-127 T 20-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted AMC99_RS01420 b18d3cb85932584f667df43a381a766f 324 SMART SM00382 43 184 0.0037 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS01420 b18d3cb85932584f667df43a381a766f 324 Gene3D G3DSA:3.40.50.300 27 192 7.6E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS01420 b18d3cb85932584f667df43a381a766f 324 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 46 176 7.1E-62 T 20-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AMC99_RS01420 b18d3cb85932584f667df43a381a766f 324 PANTHER PTHR11603 2 324 1.1E-135 T 20-04-2016 AMC99_RS01420 b18d3cb85932584f667df43a381a766f 324 SUPERFAMILY SSF52540 15 296 5.1E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS03415 f3eccdda4da636ed12fd6591dba2d061 354 Gene3D G3DSA:3.40.192.10 5 156 3.9E-54 T 20-04-2016 AMC99_RS03415 f3eccdda4da636ed12fd6591dba2d061 354 Gene3D G3DSA:3.40.50.720 157 344 3.4E-43 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS03415 f3eccdda4da636ed12fd6591dba2d061 354 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 67 81 2.9E-14 T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 AMC99_RS03415 f3eccdda4da636ed12fd6591dba2d061 354 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 289 300 2.9E-14 T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 AMC99_RS03415 f3eccdda4da636ed12fd6591dba2d061 354 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 179 199 2.9E-14 T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 AMC99_RS03415 f3eccdda4da636ed12fd6591dba2d061 354 SUPERFAMILY SSF51735 147 350 3.14E-43 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS03415 f3eccdda4da636ed12fd6591dba2d061 354 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 222 335 1.5E-9 T 20-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 AMC99_RS03415 f3eccdda4da636ed12fd6591dba2d061 354 SMART SM00839 147 353 3.6E-41 T 20-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 AMC99_RS03415 f3eccdda4da636ed12fd6591dba2d061 354 SUPERFAMILY SSF53223 6 142 9.28E-40 T 20-04-2016 AMC99_RS03415 f3eccdda4da636ed12fd6591dba2d061 354 PANTHER PTHR11606 28 350 8.9E-100 T 20-04-2016 AMC99_RS03415 f3eccdda4da636ed12fd6591dba2d061 354 PANTHER PTHR11606:SF3 28 350 8.9E-100 T 20-04-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 AMC99_RS03415 f3eccdda4da636ed12fd6591dba2d061 354 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 23 131 6.4E-22 T 20-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 AMC99_RS03415 f3eccdda4da636ed12fd6591dba2d061 354 PIRSF PIRSF000188 1 354 1.6E-126 T 20-04-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 AMC99_RS12615 a251bdf124d7eac809868c21057908fc 390 Pfam PF01551 Peptidase family M23 273 367 2.8E-36 T 20-04-2016 IPR016047 Peptidase M23 AMC99_RS12615 a251bdf124d7eac809868c21057908fc 390 SUPERFAMILY SSF51261 249 371 2.88E-57 T 20-04-2016 IPR011055 Duplicated hybrid motif AMC99_RS12615 a251bdf124d7eac809868c21057908fc 390 Gene3D G3DSA:2.70.70.10 244 372 2.0E-51 T 20-04-2016 AMC99_RS12615 a251bdf124d7eac809868c21057908fc 390 PANTHER PTHR21666 67 371 1.2E-50 T 20-04-2016 AMC99_RS05060 c4d11623d7f4f22f0a744eaa3e6731c0 218 PANTHER PTHR34406:SF1 2 215 4.3E-34 T 20-04-2016 AMC99_RS05060 c4d11623d7f4f22f0a744eaa3e6731c0 218 SMART SM00867 46 216 7.0E-51 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMC99_RS05060 c4d11623d7f4f22f0a744eaa3e6731c0 218 SUPERFAMILY SSF101874 44 217 1.06E-40 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMC99_RS05060 c4d11623d7f4f22f0a744eaa3e6731c0 218 PANTHER PTHR34406 2 215 4.3E-34 T 20-04-2016 AMC99_RS05060 c4d11623d7f4f22f0a744eaa3e6731c0 218 Gene3D G3DSA:2.40.128.110 44 217 5.7E-46 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMC99_RS05060 c4d11623d7f4f22f0a744eaa3e6731c0 218 Pfam PF04264 YceI-like domain 47 214 7.2E-29 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMC99_RS03935 c4ff5079a245c88584895519dbbf9e4d 187 Gene3D G3DSA:1.10.150.20 112 152 5.3E-5 T 20-04-2016 AMC99_RS01490 3c3e838022295999ee813b85603a0f80 420 Gene3D G3DSA:1.10.3860.10 19 415 7.5E-59 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01490 3c3e838022295999ee813b85603a0f80 420 Pfam PF00375 Sodium:dicarboxylate symporter family 19 413 3.8E-61 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01490 3c3e838022295999ee813b85603a0f80 420 PANTHER PTHR11958 17 415 2.8E-36 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01490 3c3e838022295999ee813b85603a0f80 420 SUPERFAMILY SSF118215 19 413 4.18E-60 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01490 3c3e838022295999ee813b85603a0f80 420 PANTHER PTHR11958:SF44 17 415 2.8E-36 T 20-04-2016 AMC99_RS01490 3c3e838022295999ee813b85603a0f80 420 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 1.6E-22 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01490 3c3e838022295999ee813b85603a0f80 420 PRINTS PR00173 Glutamate-aspartate symporter signature 204 223 1.6E-22 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01490 3c3e838022295999ee813b85603a0f80 420 PRINTS PR00173 Glutamate-aspartate symporter signature 304 330 1.6E-22 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01490 3c3e838022295999ee813b85603a0f80 420 PRINTS PR00173 Glutamate-aspartate symporter signature 156 178 1.6E-22 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01490 3c3e838022295999ee813b85603a0f80 420 PRINTS PR00173 Glutamate-aspartate symporter signature 58 78 1.6E-22 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS01490 3c3e838022295999ee813b85603a0f80 420 PRINTS PR00173 Glutamate-aspartate symporter signature 368 388 1.6E-22 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMC99_RS10005 13f4e8709bce73b5b78f7eea8a0dcc09 333 Pfam PF02445 Quinolinate synthetase A protein 16 314 8.1E-113 T 20-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 AMC99_RS10005 13f4e8709bce73b5b78f7eea8a0dcc09 333 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 12 316 2.1E-110 T 20-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 AMC99_RS10005 13f4e8709bce73b5b78f7eea8a0dcc09 333 SUPERFAMILY SSF142754 12 315 1.83E-114 T 20-04-2016 AMC99_RS10005 13f4e8709bce73b5b78f7eea8a0dcc09 333 Hamap MF_00568 Quinolinate synthase A [nadA]. 11 315 43.139 T 20-04-2016 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 AMC99_RS10005 13f4e8709bce73b5b78f7eea8a0dcc09 333 PANTHER PTHR30573 11 315 9.6E-135 T 20-04-2016 AMC99_RS04620 a6d4f1872f38413ac61133c21b6a50bc 238 PANTHER PTHR22572:SF15 8 228 8.2E-39 T 20-04-2016 AMC99_RS04620 a6d4f1872f38413ac61133c21b6a50bc 238 Gene3D G3DSA:3.90.550.10 8 236 3.4E-46 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS04620 a6d4f1872f38413ac61133c21b6a50bc 238 SUPERFAMILY SSF53448 8 232 5.41E-45 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS04620 a6d4f1872f38413ac61133c21b6a50bc 238 PANTHER PTHR22572 8 228 8.2E-39 T 20-04-2016 AMC99_RS04620 a6d4f1872f38413ac61133c21b6a50bc 238 Pfam PF00483 Nucleotidyl transferase 9 114 8.4E-14 T 20-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMC99_RS11855 a613034080ad762575ec98071605ee7c 93 PANTHER PTHR33175 1 93 2.2E-35 T 20-04-2016 AMC99_RS11855 a613034080ad762575ec98071605ee7c 93 SMART SM00411 1 91 2.0E-35 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_RS11855 a613034080ad762575ec98071605ee7c 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 4.9E-30 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_RS11855 a613034080ad762575ec98071605ee7c 93 Gene3D G3DSA:4.10.520.10 1 92 2.3E-32 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMC99_RS11855 a613034080ad762575ec98071605ee7c 93 SUPERFAMILY SSF47729 1 92 2.21E-28 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMC99_RS11855 a613034080ad762575ec98071605ee7c 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-17 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_RS11855 a613034080ad762575ec98071605ee7c 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-17 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_RS11855 a613034080ad762575ec98071605ee7c 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-17 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_RS11855 a613034080ad762575ec98071605ee7c 93 PANTHER PTHR33175:SF5 1 93 2.2E-35 T 20-04-2016 AMC99_RS11855 a613034080ad762575ec98071605ee7c 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 20-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMC99_RS02065 38aa287236e813a3043c48c927df429f 393 PANTHER PTHR10909 3 391 3.0E-134 T 20-04-2016 AMC99_RS02065 38aa287236e813a3043c48c927df429f 393 Gene3D G3DSA:1.20.140.10 221 392 1.3E-15 T 20-04-2016 AMC99_RS02065 38aa287236e813a3043c48c927df429f 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 126 2.9E-19 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS02065 38aa287236e813a3043c48c927df429f 393 SUPERFAMILY SSF47203 241 391 2.09E-12 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS02065 38aa287236e813a3043c48c927df429f 393 PANTHER PTHR10909:SF242 3 391 3.0E-134 T 20-04-2016 AMC99_RS02065 38aa287236e813a3043c48c927df429f 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 241 388 4.1E-15 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS02065 38aa287236e813a3043c48c927df429f 393 Gene3D G3DSA:1.10.540.10 3 128 1.3E-26 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS02065 38aa287236e813a3043c48c927df429f 393 Gene3D G3DSA:2.40.110.10 129 220 1.7E-28 T 20-04-2016 AMC99_RS02065 38aa287236e813a3043c48c927df429f 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 223 3.2E-17 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS02065 38aa287236e813a3043c48c927df429f 393 SUPERFAMILY SSF56645 3 254 2.23E-64 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS05475 f70b9dc37c064c0f2dfd267614a0940b 400 PIRSF PIRSF016719 1 400 4.1E-95 T 20-04-2016 IPR008302 Uncharacterised conserved protein UCP016719 AMC99_RS05475 f70b9dc37c064c0f2dfd267614a0940b 400 Pfam PF07075 Protein of unknown function (DUF1343) 25 400 2.1E-101 T 20-04-2016 IPR008302 Uncharacterised conserved protein UCP016719 AMC99_RS05475 f70b9dc37c064c0f2dfd267614a0940b 400 PANTHER PTHR30480 3 348 5.9E-79 T 20-04-2016 AMC99_RS05475 f70b9dc37c064c0f2dfd267614a0940b 400 PANTHER PTHR30480:SF3 3 348 5.9E-79 T 20-04-2016 AMC99_RS01730 ae8bf7225334360960d55c0576789ad3 148 PIRSF PIRSF011386 1 147 1.8E-36 T 20-04-2016 IPR018037 Nitrogen fixation protein FixH, Proteobacterial AMC99_RS01730 ae8bf7225334360960d55c0576789ad3 148 Pfam PF05751 FixH 3 145 1.7E-27 T 20-04-2016 IPR008620 Nitrogen fixation protein FixH AMC99_RS09945 43712fd0332dca2186b05b0ffef13183 925 Pfam PF00311 Phosphoenolpyruvate carboxylase 306 673 1.0E-16 T 20-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMC99_RS09945 43712fd0332dca2186b05b0ffef13183 925 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 106 119 6.3E-5 T 20-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMC99_RS09945 43712fd0332dca2186b05b0ffef13183 925 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 665 691 6.3E-5 T 20-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMC99_RS09945 43712fd0332dca2186b05b0ffef13183 925 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 197 212 6.3E-5 T 20-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMC99_RS09945 43712fd0332dca2186b05b0ffef13183 925 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 474 494 6.3E-5 T 20-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMC99_RS09945 43712fd0332dca2186b05b0ffef13183 925 SUPERFAMILY SSF51621 775 861 5.96E-130 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS09945 43712fd0332dca2186b05b0ffef13183 925 SUPERFAMILY SSF51621 2 742 5.96E-130 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMC99_RS07380 60be5b0beb8c2c49dc010b8dd634df3a 556 PANTHER PTHR23422 130 553 1.2E-102 T 20-04-2016 AMC99_RS07380 60be5b0beb8c2c49dc010b8dd634df3a 556 PANTHER PTHR23422:SF9 130 553 1.2E-102 T 20-04-2016 AMC99_RS07380 60be5b0beb8c2c49dc010b8dd634df3a 556 Pfam PF03571 Peptidase family M49 182 409 5.8E-11 T 20-04-2016 AMC99_RS01595 728e673d0b0881cee4b13a3265da8913 129 PANTHER PTHR26402:SF578 22 95 1.8E-15 T 20-04-2016 AMC99_RS01595 728e673d0b0881cee4b13a3265da8913 129 SUPERFAMILY SSF46894 19 114 3.12E-22 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_RS01595 728e673d0b0881cee4b13a3265da8913 129 PANTHER PTHR26402 22 95 1.8E-15 T 20-04-2016 AMC99_RS01595 728e673d0b0881cee4b13a3265da8913 129 SMART SM00862 39 114 1.4E-14 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS01595 728e673d0b0881cee4b13a3265da8913 129 Pfam PF00486 Transcriptional regulatory protein, C terminal 43 113 5.3E-19 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS01595 728e673d0b0881cee4b13a3265da8913 129 Gene3D G3DSA:1.10.10.10 22 114 6.1E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS12745 1f6fe2c1b837e27078aed41953123d31 434 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 339 421 5.1E-13 T 20-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AMC99_RS12745 1f6fe2c1b837e27078aed41953123d31 434 Pfam PF01943 Polysaccharide biosynthesis protein 15 287 1.3E-18 T 20-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AMC99_RS12745 1f6fe2c1b837e27078aed41953123d31 434 PANTHER PTHR30250:SF0 3 421 7.9E-29 T 20-04-2016 AMC99_RS12745 1f6fe2c1b837e27078aed41953123d31 434 PANTHER PTHR30250 3 421 7.9E-29 T 20-04-2016 AMC99_RS02815 9ae9b6f1c40f8f70f7861d7eb5c9c41c 80 Pfam PF02597 ThiS family 5 80 1.1E-9 T 20-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 AMC99_RS02815 9ae9b6f1c40f8f70f7861d7eb5c9c41c 80 SUPERFAMILY SSF54285 3 80 5.42E-10 T 20-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMC99_RS02815 9ae9b6f1c40f8f70f7861d7eb5c9c41c 80 Gene3D G3DSA:3.10.20.30 1 80 6.5E-13 T 20-04-2016 IPR012675 Beta-grasp domain AMC99_RS11140 501b3f89999ce309f79e45cf5f931eb7 105 SMART SM00894 64 100 5.7E-15 T 20-04-2016 IPR008613 Excalibur calcium-binding domain AMC99_RS11140 501b3f89999ce309f79e45cf5f931eb7 105 Pfam PF05901 Excalibur calcium-binding domain 65 100 1.2E-11 T 20-04-2016 IPR008613 Excalibur calcium-binding domain AMC99_RS07755 3e58960d7abada2b37c5eb3fd0d4ddc8 254 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 12 243 7.4E-71 T 20-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 AMC99_RS07755 3e58960d7abada2b37c5eb3fd0d4ddc8 254 PANTHER PTHR32319 5 250 3.8E-116 T 20-04-2016 AMC99_RS07755 3e58960d7abada2b37c5eb3fd0d4ddc8 254 SUPERFAMILY SSF55174 10 75 2.65E-9 T 20-04-2016 AMC99_RS07755 3e58960d7abada2b37c5eb3fd0d4ddc8 254 PANTHER PTHR32319:SF0 5 250 3.8E-116 T 20-04-2016 AMC99_RS07755 3e58960d7abada2b37c5eb3fd0d4ddc8 254 PIRSF PIRSF005578 6 254 1.2E-96 T 20-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 AMC99_RS07755 3e58960d7abada2b37c5eb3fd0d4ddc8 254 SMART SM00363 11 73 0.0024 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS07755 3e58960d7abada2b37c5eb3fd0d4ddc8 254 SUPERFAMILY SSF53335 63 249 7.2E-23 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS07755 3e58960d7abada2b37c5eb3fd0d4ddc8 254 Gene3D G3DSA:3.40.50.150 100 184 1.8E-4 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS07755 3e58960d7abada2b37c5eb3fd0d4ddc8 254 Gene3D G3DSA:3.10.290.10 10 99 4.8E-16 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMC99_RS07755 3e58960d7abada2b37c5eb3fd0d4ddc8 254 Pfam PF01728 FtsJ-like methyltransferase 67 248 1.1E-20 T 20-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AMC99_RS10180 4bca804e8df0dd40293cec3d05599be2 182 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 8 181 2.9E-53 T 20-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMC99_RS10180 4bca804e8df0dd40293cec3d05599be2 182 Pfam PF00849 RNA pseudouridylate synthase 4 151 7.2E-16 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS10180 4bca804e8df0dd40293cec3d05599be2 182 PANTHER PTHR21600:SF23 125 181 2.4E-75 T 20-04-2016 AMC99_RS10180 4bca804e8df0dd40293cec3d05599be2 182 PANTHER PTHR21600:SF23 3 108 2.4E-75 T 20-04-2016 AMC99_RS10180 4bca804e8df0dd40293cec3d05599be2 182 PANTHER PTHR21600 3 108 2.4E-75 T 20-04-2016 AMC99_RS10180 4bca804e8df0dd40293cec3d05599be2 182 SUPERFAMILY SSF55120 3 179 2.72E-38 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_RS10180 4bca804e8df0dd40293cec3d05599be2 182 PANTHER PTHR21600 125 181 2.4E-75 T 20-04-2016 AMC99_RS13560 3063ec2da013b9c673c4348b75c2c1bc 536 SUPERFAMILY SSF56317 230 504 8.5E-33 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMC99_RS13560 3063ec2da013b9c673c4348b75c2c1bc 536 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 67 478 2.2E-71 T 20-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 AMC99_RS13560 3063ec2da013b9c673c4348b75c2c1bc 536 Gene3D G3DSA:3.60.110.10 247 483 8.8E-21 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMC99_RS13560 3063ec2da013b9c673c4348b75c2c1bc 536 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 13 516 17.231 T 20-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 AMC99_RS13560 3063ec2da013b9c673c4348b75c2c1bc 536 PANTHER PTHR38686 5 535 4.0E-58 T 20-04-2016 AMC99_RS13560 3063ec2da013b9c673c4348b75c2c1bc 536 Pfam PF00795 Carbon-nitrogen hydrolase 264 480 3.2E-14 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMC99_RS11295 34c8ab745afe82d284532272bd86e312 535 SUPERFAMILY SSF52096 29 272 3.37E-72 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS11295 34c8ab745afe82d284532272bd86e312 535 PANTHER PTHR22855 6 535 0.0 T 20-04-2016 AMC99_RS11295 34c8ab745afe82d284532272bd86e312 535 Gene3D G3DSA:3.90.226.10 31 269 2.6E-79 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS11295 34c8ab745afe82d284532272bd86e312 535 Gene3D G3DSA:3.90.226.10 277 526 1.1E-88 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS11295 34c8ab745afe82d284532272bd86e312 535 SUPERFAMILY SSF52096 239 516 3.08E-84 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS11295 34c8ab745afe82d284532272bd86e312 535 PANTHER PTHR22855:SF35 6 535 0.0 T 20-04-2016 AMC99_RS11295 34c8ab745afe82d284532272bd86e312 535 Pfam PF01039 Carboxyl transferase domain 50 524 2.7E-149 T 20-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS04055 3ea0ca575a109eb95ce5476ddab5da8a 507 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 14 58 2.0E-13 T 20-04-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AMC99_RS04055 3ea0ca575a109eb95ce5476ddab5da8a 507 Gene3D G3DSA:3.40.50.410 441 498 3.2E-7 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS04055 3ea0ca575a109eb95ce5476ddab5da8a 507 Gene3D G3DSA:3.40.50.410 142 205 3.2E-7 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS04055 3ea0ca575a109eb95ce5476ddab5da8a 507 Gene3D G3DSA:3.40.50.410 330 405 3.2E-7 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS04055 3ea0ca575a109eb95ce5476ddab5da8a 507 SUPERFAMILY SSF53300 118 205 1.71E-11 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS04055 3ea0ca575a109eb95ce5476ddab5da8a 507 SUPERFAMILY SSF53300 330 402 1.71E-11 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS04055 3ea0ca575a109eb95ce5476ddab5da8a 507 SUPERFAMILY SSF53300 440 498 1.71E-11 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS07470 d0a23e020e2e0daf569ecf391806aa96 177 SUPERFAMILY SSF56053 1 82 2.13E-25 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS07470 d0a23e020e2e0daf569ecf391806aa96 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.7E-33 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS07470 d0a23e020e2e0daf569ecf391806aa96 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.7E-33 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS07470 d0a23e020e2e0daf569ecf391806aa96 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.7E-33 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS07470 d0a23e020e2e0daf569ecf391806aa96 177 Gene3D G3DSA:3.90.930.12 2 82 1.5E-29 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS07470 d0a23e020e2e0daf569ecf391806aa96 177 Gene3D G3DSA:3.90.930.12 83 177 2.8E-40 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS07470 d0a23e020e2e0daf569ecf391806aa96 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 20-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07470 d0a23e020e2e0daf569ecf391806aa96 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.571 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS07470 d0a23e020e2e0daf569ecf391806aa96 177 PANTHER PTHR11655 1 176 2.6E-85 T 20-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS07470 d0a23e020e2e0daf569ecf391806aa96 177 Pfam PF00347 Ribosomal protein L6 11 82 7.5E-15 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS07470 d0a23e020e2e0daf569ecf391806aa96 177 Pfam PF00347 Ribosomal protein L6 91 164 3.8E-17 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS07470 d0a23e020e2e0daf569ecf391806aa96 177 PANTHER PTHR11655:SF14 1 176 2.6E-85 T 20-04-2016 AMC99_RS07470 d0a23e020e2e0daf569ecf391806aa96 177 SUPERFAMILY SSF56053 83 177 4.71E-36 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS07470 d0a23e020e2e0daf569ecf391806aa96 177 PIRSF PIRSF002162 1 177 3.0E-47 T 20-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS07470 d0a23e020e2e0daf569ecf391806aa96 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 5.5E-75 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_RS00975 a2091513fb3a0ac7627524b415664d36 357 Pfam PF12412 Protein of unknown function (DUF3667) 80 124 3.0E-16 T 20-04-2016 IPR022134 Protein of unknown function DUF3667 AMC99_RS07260 d5137cfe1fc8b501223e938666d1494e 143 SMART SM00754 24 143 6.1E-12 T 20-04-2016 IPR010895 CHRD AMC99_RS07260 d5137cfe1fc8b501223e938666d1494e 143 Pfam PF07452 CHRD domain 47 141 8.7E-17 T 20-04-2016 IPR010895 CHRD AMC99_RS10715 1d8002be8a5bcd2cec28f23d37934aea 507 PIRSF PIRSF006060 61 493 1.0E-11 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS10715 1d8002be8a5bcd2cec28f23d37934aea 507 TIGRFAM TIGR00835 agcS: amino acid carrier protein 40 486 2.1E-128 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_RS10715 1d8002be8a5bcd2cec28f23d37934aea 507 PANTHER PTHR30330 11 487 3.1E-151 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_RS10715 1d8002be8a5bcd2cec28f23d37934aea 507 PANTHER PTHR30330:SF3 11 487 3.1E-151 T 20-04-2016 AMC99_RS10715 1d8002be8a5bcd2cec28f23d37934aea 507 Pfam PF01235 Sodium:alanine symporter family 74 487 4.6E-130 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_RS10715 1d8002be8a5bcd2cec28f23d37934aea 507 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 111 126 - T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_RS10715 1d8002be8a5bcd2cec28f23d37934aea 507 PRINTS PR00175 Sodium/alanine symporter signature 389 411 7.4E-49 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_RS10715 1d8002be8a5bcd2cec28f23d37934aea 507 PRINTS PR00175 Sodium/alanine symporter signature 232 251 7.4E-49 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_RS10715 1d8002be8a5bcd2cec28f23d37934aea 507 PRINTS PR00175 Sodium/alanine symporter signature 204 222 7.4E-49 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_RS10715 1d8002be8a5bcd2cec28f23d37934aea 507 PRINTS PR00175 Sodium/alanine symporter signature 327 345 7.4E-49 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_RS10715 1d8002be8a5bcd2cec28f23d37934aea 507 PRINTS PR00175 Sodium/alanine symporter signature 458 478 7.4E-49 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_RS10715 1d8002be8a5bcd2cec28f23d37934aea 507 PRINTS PR00175 Sodium/alanine symporter signature 111 133 7.4E-49 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_RS10680 ea37b28afec21f7e52160c7870289fb9 274 SUPERFAMILY SSF52540 5 229 4.96E-15 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS10680 ea37b28afec21f7e52160c7870289fb9 274 Gene3D G3DSA:3.40.50.300 5 261 4.6E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08830 b96f102c905932ac77ec1f6b2ddc0896 345 PANTHER PTHR23024 92 229 8.6E-23 T 20-04-2016 AMC99_RS08830 b96f102c905932ac77ec1f6b2ddc0896 345 Pfam PF07859 alpha/beta hydrolase fold 116 312 1.8E-16 T 20-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AMC99_RS08830 b96f102c905932ac77ec1f6b2ddc0896 345 Gene3D G3DSA:3.40.50.1820 91 342 3.1E-42 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS08830 b96f102c905932ac77ec1f6b2ddc0896 345 SUPERFAMILY SSF53474 89 319 8.38E-35 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS11815 4a0523406050e75b08d3739ac955c551 427 Pfam PF12698 ABC-2 family transporter protein 187 386 4.7E-16 T 20-04-2016 AMC99_RS12450 1552a3f927bdc1f4668fc06857cf5eac 258 Pfam PF13614 AAA domain 3 176 5.3E-58 T 20-04-2016 IPR025669 AAA domain AMC99_RS12450 1552a3f927bdc1f4668fc06857cf5eac 258 Gene3D G3DSA:3.40.50.300 3 252 2.3E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12450 1552a3f927bdc1f4668fc06857cf5eac 258 PANTHER PTHR13696 1 255 4.9E-84 T 20-04-2016 AMC99_RS12450 1552a3f927bdc1f4668fc06857cf5eac 258 PANTHER PTHR13696:SF52 1 255 4.9E-84 T 20-04-2016 AMC99_RS12450 1552a3f927bdc1f4668fc06857cf5eac 258 SUPERFAMILY SSF52540 1 252 1.19E-65 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS05850 96f286c24ef827d2c908f3cec7178233 460 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 9 453 34.497 T 20-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 AMC99_RS05850 96f286c24ef827d2c908f3cec7178233 460 PANTHER PTHR11806 8 459 1.1E-199 T 20-04-2016 AMC99_RS05850 96f286c24ef827d2c908f3cec7178233 460 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 8 452 1.5E-164 T 20-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 AMC99_RS05850 96f286c24ef827d2c908f3cec7178233 460 Gene3D G3DSA:3.50.50.60 253 254 5.6E-15 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS05850 96f286c24ef827d2c908f3cec7178233 460 Gene3D G3DSA:3.50.50.60 337 388 5.6E-15 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS05850 96f286c24ef827d2c908f3cec7178233 460 Gene3D G3DSA:3.50.50.60 7 57 5.6E-15 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS05850 96f286c24ef827d2c908f3cec7178233 460 Gene3D G3DSA:3.50.50.60 103 158 5.6E-15 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS05850 96f286c24ef827d2c908f3cec7178233 460 Pfam PF01134 Glucose inhibited division protein A 8 387 1.0E-102 T 20-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 AMC99_RS05850 96f286c24ef827d2c908f3cec7178233 460 SUPERFAMILY SSF51905 3 387 3.09E-24 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS05850 96f286c24ef827d2c908f3cec7178233 460 PANTHER PTHR11806:SF2 8 459 1.1E-199 T 20-04-2016 AMC99_RS05850 96f286c24ef827d2c908f3cec7178233 460 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 357 380 - T 20-04-2016 IPR020595 MnmG-related, conserved site AMC99_RS01560 d5ebbbce26dc66232a7eac1164d14c1e 109 PANTHER PTHR33473 17 109 7.9E-38 T 20-04-2016 AMC99_RS01560 d5ebbbce26dc66232a7eac1164d14c1e 109 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 26 105 1.9E-35 T 20-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 AMC99_RS01560 d5ebbbce26dc66232a7eac1164d14c1e 109 SUPERFAMILY SSF54736 24 108 3.4E-33 T 20-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMC99_RS01560 d5ebbbce26dc66232a7eac1164d14c1e 109 Gene3D G3DSA:3.30.1390.10 12 109 3.0E-45 T 20-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMC99_RS01560 d5ebbbce26dc66232a7eac1164d14c1e 109 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 10 104 28.769 T 20-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AMC99_RS12400 a9367c448dff1da59ca33288a1cbdaa3 147 PIRSF PIRSF004638 2 147 3.5E-52 T 20-04-2016 IPR005265 Uncharacterised protein family UPF0093 AMC99_RS12400 a9367c448dff1da59ca33288a1cbdaa3 147 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 9 147 2.0E-41 T 20-04-2016 IPR014351 Conserved hypothetical protein CHP00701 AMC99_RS12400 a9367c448dff1da59ca33288a1cbdaa3 147 Pfam PF03653 Uncharacterised protein family (UPF0093) 6 147 6.1E-54 T 20-04-2016 IPR005265 Uncharacterised protein family UPF0093 AMC99_RS12400 a9367c448dff1da59ca33288a1cbdaa3 147 PANTHER PTHR40255 7 147 9.3E-42 T 20-04-2016 AMC99_RS02355 aa7a5e4ab69c3c685ee33b7dd29ce791 403 PANTHER PTHR10909:SF242 16 399 1.6E-117 T 20-04-2016 AMC99_RS02355 aa7a5e4ab69c3c685ee33b7dd29ce791 403 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 131 2.8E-22 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS02355 aa7a5e4ab69c3c685ee33b7dd29ce791 403 SUPERFAMILY SSF47203 240 398 6.28E-15 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS02355 aa7a5e4ab69c3c685ee33b7dd29ce791 403 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 397 4.6E-17 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_RS02355 aa7a5e4ab69c3c685ee33b7dd29ce791 403 Gene3D G3DSA:1.20.140.10 230 399 3.4E-26 T 20-04-2016 AMC99_RS02355 aa7a5e4ab69c3c685ee33b7dd29ce791 403 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 228 1.5E-22 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMC99_RS02355 aa7a5e4ab69c3c685ee33b7dd29ce791 403 PANTHER PTHR10909 16 399 1.6E-117 T 20-04-2016 AMC99_RS02355 aa7a5e4ab69c3c685ee33b7dd29ce791 403 Gene3D G3DSA:2.40.110.10 134 229 4.0E-37 T 20-04-2016 AMC99_RS02355 aa7a5e4ab69c3c685ee33b7dd29ce791 403 SUPERFAMILY SSF56645 10 253 4.32E-76 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMC99_RS02355 aa7a5e4ab69c3c685ee33b7dd29ce791 403 Gene3D G3DSA:1.10.540.10 11 133 6.4E-26 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMC99_RS10025 8572ef87685edef13b8a805ee4b87cb9 363 SUPERFAMILY SSF51395 4 362 3.67E-116 T 20-04-2016 AMC99_RS10025 8572ef87685edef13b8a805ee4b87cb9 363 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 335 3.2E-84 T 20-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMC99_RS10025 8572ef87685edef13b8a805ee4b87cb9 363 PANTHER PTHR22893 2 363 2.8E-164 T 20-04-2016 AMC99_RS10025 8572ef87685edef13b8a805ee4b87cb9 363 PANTHER PTHR22893:SF14 2 363 2.8E-164 T 20-04-2016 AMC99_RS10025 8572ef87685edef13b8a805ee4b87cb9 363 Gene3D G3DSA:3.20.20.70 3 362 2.1E-123 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS06065 26473b7e4107aa7564de9821aa900ecb 487 Pfam PF00361 Proton-conducting membrane transporter 128 421 3.3E-77 T 20-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AMC99_RS06065 26473b7e4107aa7564de9821aa900ecb 487 PANTHER PTHR22773:SF41 1 483 9.5E-154 T 20-04-2016 AMC99_RS06065 26473b7e4107aa7564de9821aa900ecb 487 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 471 2.3E-140 T 20-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AMC99_RS06065 26473b7e4107aa7564de9821aa900ecb 487 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 5 472 17.743 T 20-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AMC99_RS06065 26473b7e4107aa7564de9821aa900ecb 487 PANTHER PTHR22773 1 483 9.5E-154 T 20-04-2016 AMC99_RS11880 0f95d51a1d534b04cd14ee45e5ab6578 226 Pfam PF07298 NnrU protein 7 215 1.8E-37 T 20-04-2016 IPR009915 NnrU domain AMC99_RS08820 f6f0d4d14474cd124a363ef053bdc24b 271 Pfam PF00248 Aldo/keto reductase family 18 256 4.8E-43 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMC99_RS08820 f6f0d4d14474cd124a363ef053bdc24b 271 SUPERFAMILY SSF51430 4 266 1.96E-81 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMC99_RS08820 f6f0d4d14474cd124a363ef053bdc24b 271 PANTHER PTHR11732 1 267 1.2E-115 T 20-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMC99_RS08820 f6f0d4d14474cd124a363ef053bdc24b 271 Gene3D G3DSA:3.20.20.100 4 261 1.5E-87 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMC99_RS08820 f6f0d4d14474cd124a363ef053bdc24b 271 PRINTS PR00069 Aldo-keto reductase signature 89 107 7.1E-35 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_RS08820 f6f0d4d14474cd124a363ef053bdc24b 271 PRINTS PR00069 Aldo-keto reductase signature 155 184 7.1E-35 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_RS08820 f6f0d4d14474cd124a363ef053bdc24b 271 PRINTS PR00069 Aldo-keto reductase signature 37 61 7.1E-35 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_RS08820 f6f0d4d14474cd124a363ef053bdc24b 271 PRINTS PR00069 Aldo-keto reductase signature 121 138 7.1E-35 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_RS08820 f6f0d4d14474cd124a363ef053bdc24b 271 PRINTS PR00069 Aldo-keto reductase signature 192 216 7.1E-35 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_RS08820 f6f0d4d14474cd124a363ef053bdc24b 271 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 121 138 - T 20-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMC99_RS11625 8bc2b25cd2a68478a7946c823d98ab4b 226 PANTHER PTHR11264 6 226 8.3E-109 T 20-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 AMC99_RS11625 8bc2b25cd2a68478a7946c823d98ab4b 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 60 69 - T 20-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 AMC99_RS11625 8bc2b25cd2a68478a7946c823d98ab4b 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 8 219 2.3E-70 T 20-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 AMC99_RS11625 8bc2b25cd2a68478a7946c823d98ab4b 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 7 226 35.649 T 20-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 AMC99_RS11625 8bc2b25cd2a68478a7946c823d98ab4b 226 Gene3D G3DSA:3.40.470.10 4 226 9.1E-88 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like AMC99_RS11625 8bc2b25cd2a68478a7946c823d98ab4b 226 SMART SM00987 52 216 5.3E-38 T 20-04-2016 AMC99_RS11625 8bc2b25cd2a68478a7946c823d98ab4b 226 SUPERFAMILY SSF52141 6 226 5.45E-82 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like AMC99_RS11625 8bc2b25cd2a68478a7946c823d98ab4b 226 SMART SM00986 52 216 5.3E-38 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like AMC99_RS11625 8bc2b25cd2a68478a7946c823d98ab4b 226 Pfam PF03167 Uracil DNA glycosylase superfamily 57 215 3.7E-21 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like AMC99_RS12695 2c1d141cb15cb99de8042ef202eabf3a 182 PANTHER PTHR21047 1 179 2.9E-67 T 20-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMC99_RS12695 2c1d141cb15cb99de8042ef202eabf3a 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 176 1.5E-63 T 20-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMC99_RS12695 2c1d141cb15cb99de8042ef202eabf3a 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 177 6.0E-55 T 20-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMC99_RS12695 2c1d141cb15cb99de8042ef202eabf3a 182 Gene3D G3DSA:2.60.120.10 1 179 1.9E-76 T 20-04-2016 IPR014710 RmlC-like jelly roll fold AMC99_RS12695 2c1d141cb15cb99de8042ef202eabf3a 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 175 1.5E-68 T 20-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMC99_RS12695 2c1d141cb15cb99de8042ef202eabf3a 182 SUPERFAMILY SSF51182 1 180 1.96E-74 T 20-04-2016 IPR011051 RmlC-like cupin domain AMC99_RS10290 8d175714bdd40aa7e3e89a18f9fed115 205 SUPERFAMILY SSF49503 62 159 1.22E-13 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS10290 8d175714bdd40aa7e3e89a18f9fed115 205 Gene3D G3DSA:2.60.40.420 66 145 1.4E-8 T 20-04-2016 IPR008972 Cupredoxin AMC99_RS11925 ebacbe8a41cc324896150404e68159d5 167 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 52 160 1.5E-24 T 20-04-2016 IPR018673 Protein of unknown function DUF2141 AMC99_RS02895 360151b1b6e2ecd734f979821e1570ca 470 PANTHER PTHR12153 9 383 1.8E-72 T 20-04-2016 AMC99_RS02895 360151b1b6e2ecd734f979821e1570ca 470 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 17 384 5.9E-119 T 20-04-2016 IPR003846 Uncharacterised protein family UPF0061 AMC99_RS02435 16968d2f679886de12443b10e2f9af52 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 1.7E-130 T 20-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 AMC99_RS02435 16968d2f679886de12443b10e2f9af52 427 PANTHER PTHR33362 1 425 6.6E-177 T 20-04-2016 AMC99_RS02435 16968d2f679886de12443b10e2f9af52 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 416 1.2E-110 T 20-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMC99_RS02435 16968d2f679886de12443b10e2f9af52 427 PANTHER PTHR33362:SF2 1 425 6.6E-177 T 20-04-2016 AMC99_RS02435 16968d2f679886de12443b10e2f9af52 427 PIRSF PIRSF006066 1 427 5.1E-150 T 20-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 AMC99_RS01370 bcb6273e4674834252552f3819c963f8 341 PANTHER PTHR21535 102 341 3.3E-23 T 20-04-2016 AMC99_RS01370 bcb6273e4674834252552f3819c963f8 341 Gene3D G3DSA:1.20.58.340 155 260 3.4E-11 T 20-04-2016 AMC99_RS01370 bcb6273e4674834252552f3819c963f8 341 SUPERFAMILY SSF143865 19 267 5.23E-44 T 20-04-2016 AMC99_RS01370 bcb6273e4674834252552f3819c963f8 341 Gene3D G3DSA:1.20.58.340 276 341 6.5E-19 T 20-04-2016 AMC99_RS01370 bcb6273e4674834252552f3819c963f8 341 Pfam PF01544 CorA-like Mg2+ transporter protein 52 337 2.2E-49 T 20-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AMC99_RS01370 bcb6273e4674834252552f3819c963f8 341 SUPERFAMILY SSF144083 279 339 6.28E-15 T 20-04-2016 AMC99_RS04185 02eb76aeeda3707f4c79d9a0ab49365f 342 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 9 331 3.7E-116 T 20-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 AMC99_RS04185 02eb76aeeda3707f4c79d9a0ab49365f 342 Gene3D G3DSA:3.40.718.10 8 335 5.2E-118 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMC99_RS04185 02eb76aeeda3707f4c79d9a0ab49365f 342 PANTHER PTHR30004 7 338 1.1E-127 T 20-04-2016 AMC99_RS04185 02eb76aeeda3707f4c79d9a0ab49365f 342 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 42 328 3.1E-96 T 20-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 AMC99_RS04185 02eb76aeeda3707f4c79d9a0ab49365f 342 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 6 332 32.767 T 20-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 AMC99_RS04185 02eb76aeeda3707f4c79d9a0ab49365f 342 PANTHER PTHR30004:SF6 7 338 1.1E-127 T 20-04-2016 AMC99_RS04185 02eb76aeeda3707f4c79d9a0ab49365f 342 SUPERFAMILY SSF53659 9 335 1.28E-98 T 20-04-2016 AMC99_RS06290 1e6466f5f35fa5d84c09fea7fc52f839 342 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 36 285 1.9E-51 T 20-04-2016 IPR019127 Exosortase EpsH-related KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMC99_RS06290 1e6466f5f35fa5d84c09fea7fc52f839 342 TIGRFAM TIGR03109 exosortase_1: exosortase A 22 286 1.9E-85 T 20-04-2016 IPR017540 Exosortase 1 AMC99_RS06290 1e6466f5f35fa5d84c09fea7fc52f839 342 TIGRFAM TIGR02602 8TM_EpsH: exosortase 51 279 2.3E-50 T 20-04-2016 IPR013426 Exosortase, EpsH AMC99_RS06290 1e6466f5f35fa5d84c09fea7fc52f839 342 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 191 284 5.6E-18 T 20-04-2016 IPR026392 Exosortase/Archaeosortase domain AMC99_RS11385 8f18be1f2907748ae48795fe3d2a7c43 576 Gene3D G3DSA:3.30.70.270 404 555 1.9E-35 T 20-04-2016 AMC99_RS11385 8f18be1f2907748ae48795fe3d2a7c43 576 SUPERFAMILY SSF55073 407 555 2.98E-32 T 20-04-2016 IPR029787 Nucleotide cyclase AMC99_RS11385 8f18be1f2907748ae48795fe3d2a7c43 576 PANTHER PTHR10799 432 568 3.9E-15 T 20-04-2016 AMC99_RS11385 8f18be1f2907748ae48795fe3d2a7c43 576 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 398 556 2.4E-32 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS11385 8f18be1f2907748ae48795fe3d2a7c43 576 Pfam PF07695 7TM diverse intracellular signalling 179 379 4.1E-17 T 20-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AMC99_RS11385 8f18be1f2907748ae48795fe3d2a7c43 576 Pfam PF00990 Diguanylate cyclase, GGDEF domain 404 553 2.2E-30 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS11385 8f18be1f2907748ae48795fe3d2a7c43 576 SMART SM00267 391 557 4.0E-34 T 20-04-2016 IPR000160 GGDEF domain AMC99_RS09620 221c582049114e9f6c897be7c158fe65 279 SMART SM00382 50 249 1.7E-14 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS09620 221c582049114e9f6c897be7c158fe65 279 Gene3D G3DSA:3.40.50.300 20 255 2.3E-65 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09620 221c582049114e9f6c897be7c158fe65 279 PANTHER PTHR24220:SF483 27 267 2.4E-127 T 20-04-2016 AMC99_RS09620 221c582049114e9f6c897be7c158fe65 279 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_RS09620 221c582049114e9f6c897be7c158fe65 279 Pfam PF00005 ABC transporter 42 192 3.9E-31 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS09620 221c582049114e9f6c897be7c158fe65 279 SUPERFAMILY SSF52540 25 254 1.09E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09620 221c582049114e9f6c897be7c158fe65 279 PANTHER PTHR24220 27 267 2.4E-127 T 20-04-2016 AMC99_RS12200 d6ae72e8f428af821e3baf5b56b98766 601 PANTHER PTHR33361:SF4 12 600 1.0E-179 T 20-04-2016 AMC99_RS12200 d6ae72e8f428af821e3baf5b56b98766 601 Pfam PF05960 Bacterial protein of unknown function (DUF885) 59 592 4.4E-165 T 20-04-2016 IPR010281 Protein of unknown function DUF885 AMC99_RS12200 d6ae72e8f428af821e3baf5b56b98766 601 PANTHER PTHR33361 12 600 1.0E-179 T 20-04-2016 AMC99_RS07545 b307662ccd764834761a0003b9d59d1c 287 Gene3D G3DSA:4.10.960.10 79 159 3.1E-28 T 20-04-2016 AMC99_RS07545 b307662ccd764834761a0003b9d59d1c 287 ProSitePatterns PS00474 Ribosomal protein L3 signature. 103 126 - T 20-04-2016 IPR019926 Ribosomal protein L3, conserved site AMC99_RS07545 b307662ccd764834761a0003b9d59d1c 287 PANTHER PTHR11229 1 258 8.0E-115 T 20-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07545 b307662ccd764834761a0003b9d59d1c 287 SUPERFAMILY SSF50447 1 214 1.06E-81 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain AMC99_RS07545 b307662ccd764834761a0003b9d59d1c 287 Gene3D G3DSA:2.40.30.10 160 210 1.4E-10 T 20-04-2016 AMC99_RS07545 b307662ccd764834761a0003b9d59d1c 287 Gene3D G3DSA:2.40.30.10 3 33 1.4E-10 T 20-04-2016 AMC99_RS07545 b307662ccd764834761a0003b9d59d1c 287 Pfam PF00297 Ribosomal protein L3 99 184 1.5E-15 T 20-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07545 b307662ccd764834761a0003b9d59d1c 287 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 209 34.774 T 20-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07545 b307662ccd764834761a0003b9d59d1c 287 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 206 6.9E-83 T 20-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS03570 4ad189d8cd141054f3dd68b501e61dc1 361 Pfam PF03734 L,D-transpeptidase catalytic domain 165 310 1.7E-22 T 20-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMC99_RS03570 4ad189d8cd141054f3dd68b501e61dc1 361 PANTHER PTHR41533 144 361 3.4E-50 T 20-04-2016 AMC99_RS03570 4ad189d8cd141054f3dd68b501e61dc1 361 SUPERFAMILY SSF141523 250 299 1.7E-19 T 20-04-2016 AMC99_RS03570 4ad189d8cd141054f3dd68b501e61dc1 361 SUPERFAMILY SSF141523 162 218 1.7E-19 T 20-04-2016 AMC99_RS03570 4ad189d8cd141054f3dd68b501e61dc1 361 Gene3D G3DSA:2.40.440.10 161 209 5.6E-13 T 20-04-2016 AMC99_RS03570 4ad189d8cd141054f3dd68b501e61dc1 361 Gene3D G3DSA:2.40.440.10 252 299 5.6E-13 T 20-04-2016 AMC99_RS03570 4ad189d8cd141054f3dd68b501e61dc1 361 PANTHER PTHR41533:SF1 144 361 3.4E-50 T 20-04-2016 AMC99_RS01070 ea69c9c0914d5f5437a0ba15417bcb87 267 SUPERFAMILY SSF52096 129 220 7.16E-5 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS12340 af2f3f76347f923a32c78655cd94a57d 261 SUPERFAMILY SSF56219 1 259 9.81E-77 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMC99_RS12340 af2f3f76347f923a32c78655cd94a57d 261 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 259 4.8E-71 T 20-04-2016 AMC99_RS12340 af2f3f76347f923a32c78655cd94a57d 261 PANTHER PTHR22748:SF9 1 260 1.2E-118 T 20-04-2016 AMC99_RS12340 af2f3f76347f923a32c78655cd94a57d 261 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 252 3.3E-21 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMC99_RS12340 af2f3f76347f923a32c78655cd94a57d 261 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 259 1.4E-67 T 20-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMC99_RS12340 af2f3f76347f923a32c78655cd94a57d 261 Gene3D G3DSA:3.60.10.10 1 259 1.7E-79 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMC99_RS12340 af2f3f76347f923a32c78655cd94a57d 261 PANTHER PTHR22748 1 260 1.2E-118 T 20-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMC99_RS00025 d7d7539ea541b9d3c3b2066a970848ac 178 PANTHER PTHR37512 1 178 2.9E-39 T 20-04-2016 AMC99_RS00025 d7d7539ea541b9d3c3b2066a970848ac 178 SUPERFAMILY SSF52540 4 161 1.21E-19 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00025 d7d7539ea541b9d3c3b2066a970848ac 178 Gene3D G3DSA:3.40.50.300 2 160 1.0E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS00025 d7d7539ea541b9d3c3b2066a970848ac 178 Pfam PF13521 AAA domain 4 156 2.3E-30 T 20-04-2016 AMC99_RS01815 9638bc69c023d1402ffda3397b90a1a4 418 PANTHER PTHR23502 20 406 7.7E-82 T 20-04-2016 AMC99_RS01815 9638bc69c023d1402ffda3397b90a1a4 418 Gene3D G3DSA:1.20.1250.20 22 206 2.0E-27 T 20-04-2016 AMC99_RS01815 9638bc69c023d1402ffda3397b90a1a4 418 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 22 400 2.1E-60 T 20-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AMC99_RS01815 9638bc69c023d1402ffda3397b90a1a4 418 PANTHER PTHR23502:SF19 20 406 7.7E-82 T 20-04-2016 AMC99_RS01815 9638bc69c023d1402ffda3397b90a1a4 418 SUPERFAMILY SSF103473 21 401 6.28E-56 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS01815 9638bc69c023d1402ffda3397b90a1a4 418 Gene3D G3DSA:1.20.1250.20 226 400 4.3E-6 T 20-04-2016 AMC99_RS01815 9638bc69c023d1402ffda3397b90a1a4 418 Pfam PF07690 Major Facilitator Superfamily 27 369 1.9E-33 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS06195 065a24d8fa8a910b83a5edccc510b9ba 239 PANTHER PTHR10108 61 180 2.5E-20 T 20-04-2016 AMC99_RS06195 065a24d8fa8a910b83a5edccc510b9ba 239 PANTHER PTHR10108:SF849 61 180 2.5E-20 T 20-04-2016 AMC99_RS06195 065a24d8fa8a910b83a5edccc510b9ba 239 SUPERFAMILY SSF53335 60 208 1.88E-31 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS06195 065a24d8fa8a910b83a5edccc510b9ba 239 Pfam PF13847 Methyltransferase domain 70 179 4.5E-12 T 20-04-2016 IPR025714 Methyltransferase domain AMC99_RS06195 065a24d8fa8a910b83a5edccc510b9ba 239 Gene3D G3DSA:3.40.50.150 60 183 5.7E-28 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS03800 014071fc3edf5d8140ab36071c57c829 234 SUPERFAMILY SSF52317 5 192 1.28E-18 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS03800 014071fc3edf5d8140ab36071c57c829 234 Pfam PF00117 Glutamine amidotransferase class-I 50 111 8.5E-6 T 20-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMC99_RS03800 014071fc3edf5d8140ab36071c57c829 234 Gene3D G3DSA:3.40.50.880 3 196 3.1E-24 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like AMC99_RS06085 30aa5a625f417d356ffb88dea7c6baad 207 PANTHER PTHR33269 1 200 1.5E-62 T 20-04-2016 AMC99_RS06085 30aa5a625f417d356ffb88dea7c6baad 207 PANTHER PTHR33269:SF4 1 200 1.5E-62 T 20-04-2016 AMC99_RS06085 30aa5a625f417d356ffb88dea7c6baad 207 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 167 4.9E-38 T 20-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 AMC99_RS11845 c0beba8b09fbb9f7de84d0044fdabce8 216 SUPERFAMILY SSF141371 116 191 6.87E-7 T 20-04-2016 AMC99_RS11845 c0beba8b09fbb9f7de84d0044fdabce8 216 SUPERFAMILY SSF141371 22 97 4.32E-5 T 20-04-2016 AMC99_RS11845 c0beba8b09fbb9f7de84d0044fdabce8 216 Pfam PF07238 PilZ domain 117 198 4.7E-6 T 20-04-2016 IPR009875 PilZ domain GO:0035438 AMC99_RS03815 03efae2739dc5395687cdc5d024decb4 342 SMART SM00729 58 262 1.8E-4 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMC99_RS03815 03efae2739dc5395687cdc5d024decb4 342 Pfam PF13353 4Fe-4S single cluster domain 61 152 7.6E-5 T 20-04-2016 AMC99_RS03815 03efae2739dc5395687cdc5d024decb4 342 Gene3D G3DSA:3.20.20.70 62 300 8.9E-16 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS03815 03efae2739dc5395687cdc5d024decb4 342 Pfam PF04055 Radical SAM superfamily 64 210 8.5E-8 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_RS03815 03efae2739dc5395687cdc5d024decb4 342 PANTHER PTHR22976:SF13 55 304 2.7E-50 T 20-04-2016 AMC99_RS03815 03efae2739dc5395687cdc5d024decb4 342 PANTHER PTHR22976 55 304 2.7E-50 T 20-04-2016 AMC99_RS03815 03efae2739dc5395687cdc5d024decb4 342 SUPERFAMILY SSF102114 54 267 1.96E-14 T 20-04-2016 AMC99_RS11960 bc2027178dccf967053dc9cd9ff89a7c 353 Gene3D G3DSA:3.40.50.2300 74 188 6.6E-15 T 20-04-2016 AMC99_RS11960 bc2027178dccf967053dc9cd9ff89a7c 353 Pfam PF13377 Periplasmic binding protein-like domain 185 344 6.9E-33 T 20-04-2016 AMC99_RS11960 bc2027178dccf967053dc9cd9ff89a7c 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 4.5E-16 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMC99_RS11960 bc2027178dccf967053dc9cd9ff89a7c 353 Gene3D G3DSA:1.10.260.40 8 68 5.2E-22 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS11960 bc2027178dccf967053dc9cd9ff89a7c 353 SUPERFAMILY SSF47413 7 65 2.53E-16 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS11960 bc2027178dccf967053dc9cd9ff89a7c 353 SUPERFAMILY SSF53822 100 348 5.57E-54 T 20-04-2016 IPR028082 Periplasmic binding protein-like I AMC99_RS11960 bc2027178dccf967053dc9cd9ff89a7c 353 PANTHER PTHR30146 7 351 1.9E-84 T 20-04-2016 AMC99_RS11960 bc2027178dccf967053dc9cd9ff89a7c 353 Gene3D G3DSA:3.40.50.2300 189 345 4.9E-50 T 20-04-2016 AMC99_RS11960 bc2027178dccf967053dc9cd9ff89a7c 353 SMART SM00354 7 77 4.1E-19 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMC99_RS12990 9f9545730a526c799e5a17b8042566c7 252 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 40 249 1.4E-55 T 20-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AMC99_RS12990 9f9545730a526c799e5a17b8042566c7 252 Gene3D G3DSA:3.60.140.10 39 251 1.0E-65 T 20-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AMC99_RS12990 9f9545730a526c799e5a17b8042566c7 252 SUPERFAMILY SSF64438 39 251 6.59E-63 T 20-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic AMC99_RS12990 9f9545730a526c799e5a17b8042566c7 252 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 49 249 1.5E-46 T 20-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AMC99_RS12990 9f9545730a526c799e5a17b8042566c7 252 PANTHER PTHR30616 42 252 1.9E-53 T 20-04-2016 AMC99_RS02460 309a4601b4ee9eb8dde7a7c0b7747968 347 Gene3D G3DSA:3.90.1200.10 133 310 1.9E-26 T 20-04-2016 AMC99_RS02460 309a4601b4ee9eb8dde7a7c0b7747968 347 SUPERFAMILY SSF56112 16 310 1.14E-38 T 20-04-2016 IPR011009 Protein kinase-like domain AMC99_RS02460 309a4601b4ee9eb8dde7a7c0b7747968 347 Pfam PF01636 Phosphotransferase enzyme family 33 272 1.7E-31 T 20-04-2016 IPR002575 Aminoglycoside phosphotransferase AMC99_RS02255 c3993d5abdf0bd55dbecff0fbf10ad7a 128 SUPERFAMILY SSF54593 10 126 2.2E-20 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS02255 c3993d5abdf0bd55dbecff0fbf10ad7a 128 Gene3D G3DSA:3.10.180.10 13 126 1.1E-15 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS02255 c3993d5abdf0bd55dbecff0fbf10ad7a 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 124 1.6E-5 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_RS00090 1b2b339b5ef79469715e46cd7a8eeb7c 148 Gene3D G3DSA:3.90.190.10 7 126 1.7E-17 T 20-04-2016 IPR029021 Protein-tyrosine phosphatase-like AMC99_RS00090 1b2b339b5ef79469715e46cd7a8eeb7c 148 SUPERFAMILY SSF52799 9 116 2.34E-8 T 20-04-2016 IPR029021 Protein-tyrosine phosphatase-like AMC99_RS00090 1b2b339b5ef79469715e46cd7a8eeb7c 148 Pfam PF04273 Putative phosphatase (DUF442) 54 108 6.4E-9 T 20-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- AMC99_RS01135 424c39de5a511e8f813158e894606294 242 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 104 240 6.3E-41 T 20-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS01135 424c39de5a511e8f813158e894606294 242 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 4 100 5.6E-17 T 20-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS01135 424c39de5a511e8f813158e894606294 242 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 241 30.691 T 20-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS01135 424c39de5a511e8f813158e894606294 242 SUPERFAMILY SSF55347 103 212 3.92E-34 T 20-04-2016 AMC99_RS01135 424c39de5a511e8f813158e894606294 242 SUPERFAMILY SSF51735 212 242 2.04E-33 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS01135 424c39de5a511e8f813158e894606294 242 SUPERFAMILY SSF51735 2 102 2.04E-33 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS01135 424c39de5a511e8f813158e894606294 242 PANTHER PTHR20836 6 242 2.6E-61 T 20-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS01135 424c39de5a511e8f813158e894606294 242 Gene3D G3DSA:3.30.360.10 111 209 1.7E-36 T 20-04-2016 AMC99_RS01135 424c39de5a511e8f813158e894606294 242 PANTHER PTHR20836:SF0 6 242 2.6E-61 T 20-04-2016 AMC99_RS01135 424c39de5a511e8f813158e894606294 242 PIRSF PIRSF000161 1 242 5.4E-73 T 20-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS01135 424c39de5a511e8f813158e894606294 242 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 42 241 2.6E-62 T 20-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS01135 424c39de5a511e8f813158e894606294 242 Gene3D G3DSA:3.40.50.720 3 110 6.7E-7 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS01135 424c39de5a511e8f813158e894606294 242 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 126 143 - T 20-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMC99_RS02660 2a7dbddc65c60b92c17e223608c8f936 117 Pfam PF07237 Protein of unknown function (DUF1428) 1 101 9.4E-41 T 20-04-2016 IPR009874 Protein of unknown function DUF1428 AMC99_RS02660 2a7dbddc65c60b92c17e223608c8f936 117 Gene3D G3DSA:3.30.70.900 2 114 2.8E-46 T 20-04-2016 AMC99_RS02660 2a7dbddc65c60b92c17e223608c8f936 117 SUPERFAMILY SSF54909 1 114 1.8E-45 T 20-04-2016 IPR011008 Dimeric alpha-beta barrel AMC99_RS02660 2a7dbddc65c60b92c17e223608c8f936 117 PIRSF PIRSF007028 1 115 5.9E-44 T 20-04-2016 IPR009874 Protein of unknown function DUF1428 AMC99_RS08380 71cf1c5ca08217dce3341a595ab7c30b 245 Gene3D G3DSA:3.40.50.720 7 245 2.4E-70 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08380 71cf1c5ca08217dce3341a595ab7c30b 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_RS08380 71cf1c5ca08217dce3341a595ab7c30b 245 SUPERFAMILY SSF51735 10 245 2.29E-68 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08380 71cf1c5ca08217dce3341a595ab7c30b 245 PANTHER PTHR24321 7 245 9.4E-41 T 20-04-2016 AMC99_RS08380 71cf1c5ca08217dce3341a595ab7c30b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.8E-31 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08380 71cf1c5ca08217dce3341a595ab7c30b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.8E-31 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08380 71cf1c5ca08217dce3341a595ab7c30b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.8E-31 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08380 71cf1c5ca08217dce3341a595ab7c30b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.8E-31 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08380 71cf1c5ca08217dce3341a595ab7c30b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.8E-31 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS08380 71cf1c5ca08217dce3341a595ab7c30b 245 PANTHER PTHR24321:SF6 7 245 9.4E-41 T 20-04-2016 AMC99_RS08380 71cf1c5ca08217dce3341a595ab7c30b 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 244 3.0E-56 T 20-04-2016 AMC99_RS12500 e221d2ff6bb5367b51515bd7e3a877c3 319 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 13 203 2.4E-48 T 20-04-2016 IPR006070 YrdC-like domain GO:0003725 AMC99_RS12500 e221d2ff6bb5367b51515bd7e3a877c3 319 PANTHER PTHR17490:SF3 13 239 8.1E-80 T 20-04-2016 AMC99_RS12500 e221d2ff6bb5367b51515bd7e3a877c3 319 Pfam PF01300 Telomere recombination 22 200 2.6E-53 T 20-04-2016 IPR006070 YrdC-like domain GO:0003725 AMC99_RS12500 e221d2ff6bb5367b51515bd7e3a877c3 319 Pfam PF03481 Putative GTP-binding controlling metal-binding 224 319 1.5E-14 T 20-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain AMC99_RS12500 e221d2ff6bb5367b51515bd7e3a877c3 319 SUPERFAMILY SSF55821 10 204 1.62E-58 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMC99_RS12500 e221d2ff6bb5367b51515bd7e3a877c3 319 PANTHER PTHR17490 13 239 8.1E-80 T 20-04-2016 AMC99_RS12500 e221d2ff6bb5367b51515bd7e3a877c3 319 Gene3D G3DSA:3.90.870.10 12 204 5.8E-68 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMC99_RS12500 e221d2ff6bb5367b51515bd7e3a877c3 319 PIRSF PIRSF004930 5 319 1.9E-88 T 20-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 AMC99_RS01265 ec174c76d4104333906a4a2a0dee7675 262 SMART SM00850 165 261 1.7E-15 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 AMC99_RS01265 ec174c76d4104333906a4a2a0dee7675 262 Pfam PF04397 LytTr DNA-binding domain 173 259 1.1E-14 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 AMC99_RS01100 8f62e6be6d6c608dd30b677a6f07008f 291 Pfam PF02265 S1/P1 Nuclease 22 279 2.7E-51 T 20-04-2016 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 AMC99_RS01100 8f62e6be6d6c608dd30b677a6f07008f 291 Gene3D G3DSA:1.10.575.10 22 281 6.3E-55 T 20-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 AMC99_RS01100 8f62e6be6d6c608dd30b677a6f07008f 291 PANTHER PTHR33146 1 290 1.2E-46 T 20-04-2016 AMC99_RS01100 8f62e6be6d6c608dd30b677a6f07008f 291 SUPERFAMILY SSF48537 22 276 4.45E-49 T 20-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 AMC99_RS03740 6d6d4fc7d3cb591c7111ff26b5f5c91c 591 TIGRFAM TIGR00815 sulP: sulfate permease 9 551 8.3E-133 T 20-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 AMC99_RS03740 6d6d4fc7d3cb591c7111ff26b5f5c91c 591 Pfam PF00916 Sulfate permease family 22 405 1.3E-100 T 20-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AMC99_RS03740 6d6d4fc7d3cb591c7111ff26b5f5c91c 591 PANTHER PTHR11814 4 563 2.6E-185 T 20-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 AMC99_RS03740 6d6d4fc7d3cb591c7111ff26b5f5c91c 591 SUPERFAMILY SSF52091 456 566 2.94E-15 T 20-04-2016 IPR002645 STAS domain AMC99_RS03740 6d6d4fc7d3cb591c7111ff26b5f5c91c 591 Pfam PF01740 STAS domain 461 563 3.5E-12 T 20-04-2016 IPR002645 STAS domain AMC99_RS03740 6d6d4fc7d3cb591c7111ff26b5f5c91c 591 Gene3D G3DSA:3.30.750.24 461 567 2.1E-14 T 20-04-2016 IPR002645 STAS domain AMC99_RS07050 332a17e28b73c6872996f6adbab0e44c 282 PANTHER PTHR22855 1 278 1.1E-130 T 20-04-2016 AMC99_RS07050 332a17e28b73c6872996f6adbab0e44c 282 Pfam PF01039 Carboxyl transferase domain 94 260 1.6E-16 T 20-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS07050 332a17e28b73c6872996f6adbab0e44c 282 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 2 279 2.1E-105 T 20-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS07050 332a17e28b73c6872996f6adbab0e44c 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 126 140 8.1E-36 T 20-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS07050 332a17e28b73c6872996f6adbab0e44c 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 248 257 8.1E-36 T 20-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS07050 332a17e28b73c6872996f6adbab0e44c 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 197 214 8.1E-36 T 20-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS07050 332a17e28b73c6872996f6adbab0e44c 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 160 178 8.1E-36 T 20-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS07050 332a17e28b73c6872996f6adbab0e44c 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 226 237 8.1E-36 T 20-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS07050 332a17e28b73c6872996f6adbab0e44c 282 SUPERFAMILY SSF52096 23 279 1.39E-75 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS07050 332a17e28b73c6872996f6adbab0e44c 282 Gene3D G3DSA:3.90.226.10 17 278 2.0E-62 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS07050 332a17e28b73c6872996f6adbab0e44c 282 PANTHER PTHR22855:SF17 1 278 1.1E-130 T 20-04-2016 AMC99_RS07050 332a17e28b73c6872996f6adbab0e44c 282 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 278 36.004 T 20-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMC99_RS11040 cf1d42f7b724da9f7208e5b3ad486087 475 SUPERFAMILY SSF53720 3 468 1.57E-160 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMC99_RS11040 cf1d42f7b724da9f7208e5b3ad486087 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 269 280 - T 20-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AMC99_RS11040 cf1d42f7b724da9f7208e5b3ad486087 475 PANTHER PTHR11699 5 469 1.8E-218 T 20-04-2016 AMC99_RS11040 cf1d42f7b724da9f7208e5b3ad486087 475 Gene3D G3DSA:3.40.309.10 256 441 4.4E-70 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMC99_RS11040 cf1d42f7b724da9f7208e5b3ad486087 475 Gene3D G3DSA:3.40.605.10 3 255 2.4E-91 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS11040 cf1d42f7b724da9f7208e5b3ad486087 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 241 248 - T 20-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AMC99_RS11040 cf1d42f7b724da9f7208e5b3ad486087 475 Pfam PF00171 Aldehyde dehydrogenase family 18 464 1.1E-158 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS12260 0a11602ba66e477d1af43e2b47998be5 68 Gene3D G3DSA:1.20.120.520 5 65 5.5E-8 T 20-04-2016 AMC99_RS12260 0a11602ba66e477d1af43e2b47998be5 68 Pfam PF01814 Hemerythrin HHE cation binding domain 4 64 1.3E-8 T 20-04-2016 IPR012312 Haemerythrin-like AMC99_RS07395 fc08f86a3c8f829e2dfcbf613adcf1d5 210 Pfam PF03458 UPF0126 domain 97 167 1.3E-15 T 20-04-2016 IPR005115 Uncharacterised domain UPF0126 AMC99_RS07395 fc08f86a3c8f829e2dfcbf613adcf1d5 210 Pfam PF03458 UPF0126 domain 12 83 2.8E-18 T 20-04-2016 IPR005115 Uncharacterised domain UPF0126 AMC99_RS07395 fc08f86a3c8f829e2dfcbf613adcf1d5 210 PANTHER PTHR30506:SF3 4 209 4.7E-40 T 20-04-2016 AMC99_RS07395 fc08f86a3c8f829e2dfcbf613adcf1d5 210 PANTHER PTHR30506 4 209 4.7E-40 T 20-04-2016 AMC99_RS04815 59d45f6f103fc650938b6ca8b0a806e2 228 PANTHER PTHR21666 109 226 1.1E-23 T 20-04-2016 AMC99_RS04815 59d45f6f103fc650938b6ca8b0a806e2 228 Gene3D G3DSA:2.70.70.10 76 227 1.0E-33 T 20-04-2016 AMC99_RS04815 59d45f6f103fc650938b6ca8b0a806e2 228 SUPERFAMILY SSF51261 64 226 1.67E-32 T 20-04-2016 IPR011055 Duplicated hybrid motif AMC99_RS04815 59d45f6f103fc650938b6ca8b0a806e2 228 Pfam PF01551 Peptidase family M23 114 206 4.1E-23 T 20-04-2016 IPR016047 Peptidase M23 AMC99_RS01250 05828df05839af5e6833d42898801511 189 PANTHER PTHR35562 84 189 6.3E-16 T 20-04-2016 AMC99_RS01250 05828df05839af5e6833d42898801511 189 SUPERFAMILY SSF160443 95 186 1.83E-9 T 20-04-2016 IPR002625 Smr domain AMC99_RS01250 05828df05839af5e6833d42898801511 189 PANTHER PTHR35562:SF2 84 189 6.3E-16 T 20-04-2016 AMC99_RS01250 05828df05839af5e6833d42898801511 189 Pfam PF01713 Smr domain 97 186 2.1E-16 T 20-04-2016 IPR002625 Smr domain AMC99_RS13235 31672c144b00c26f465cb4f6bf7f5d23 312 PANTHER PTHR21624 8 272 5.3E-97 T 20-04-2016 AMC99_RS13235 31672c144b00c26f465cb4f6bf7f5d23 312 Pfam PF04116 Fatty acid hydroxylase superfamily 81 216 9.4E-30 T 20-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 AMC99_RS08495 90041003ca60ac506bfe2dc699d46aec 230 SUPERFAMILY SSF51735 5 215 1.19E-34 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08495 90041003ca60ac506bfe2dc699d46aec 230 Gene3D G3DSA:3.40.50.720 3 212 2.5E-39 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08495 90041003ca60ac506bfe2dc699d46aec 230 PANTHER PTHR14097:SF7 1 227 4.8E-52 T 20-04-2016 AMC99_RS08495 90041003ca60ac506bfe2dc699d46aec 230 Pfam PF13460 NAD(P)H-binding 11 169 9.8E-14 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS08495 90041003ca60ac506bfe2dc699d46aec 230 PANTHER PTHR14097 1 227 4.8E-52 T 20-04-2016 AMC99_RS02915 b20b6034ac9daed6dcf5a37cb8271428 447 PANTHER PTHR34512:SF1 92 447 3.5E-23 T 20-04-2016 AMC99_RS02915 b20b6034ac9daed6dcf5a37cb8271428 447 SUPERFAMILY SSF50998 65 437 5.49E-76 T 20-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMC99_RS02915 b20b6034ac9daed6dcf5a37cb8271428 447 Pfam PF13360 PQQ-like domain 129 366 3.5E-58 T 20-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat AMC99_RS02915 b20b6034ac9daed6dcf5a37cb8271428 447 PANTHER PTHR34512 92 447 3.5E-23 T 20-04-2016 AMC99_RS02915 b20b6034ac9daed6dcf5a37cb8271428 447 SMART SM00564 299 330 70.0 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_RS02915 b20b6034ac9daed6dcf5a37cb8271428 447 SMART SM00564 337 368 52.0 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_RS02915 b20b6034ac9daed6dcf5a37cb8271428 447 SMART SM00564 163 194 0.0017 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_RS02915 b20b6034ac9daed6dcf5a37cb8271428 447 SMART SM00564 247 279 86.0 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_RS02915 b20b6034ac9daed6dcf5a37cb8271428 447 SMART SM00564 116 147 4.5E-5 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_RS02915 b20b6034ac9daed6dcf5a37cb8271428 447 SMART SM00564 203 234 9.1 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_RS02915 b20b6034ac9daed6dcf5a37cb8271428 447 SMART SM00564 387 418 600.0 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_RS02915 b20b6034ac9daed6dcf5a37cb8271428 447 Gene3D G3DSA:2.140.10.10 10 26 1.1E-69 T 20-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AMC99_RS02915 b20b6034ac9daed6dcf5a37cb8271428 447 Gene3D G3DSA:2.140.10.10 67 446 1.1E-69 T 20-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AMC99_RS12700 f86f568f1af78233eb0bf8d2ae2e7915 347 Pfam PF14897 EpsG family 25 344 8.7E-40 T 20-04-2016 AMC99_RS03885 e968c53ea604b2f0d542295bb431e761 482 Gene3D G3DSA:3.40.309.10 266 456 1.0E-57 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMC99_RS03885 e968c53ea604b2f0d542295bb431e761 482 Pfam PF00171 Aldehyde dehydrogenase family 15 476 7.9E-150 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS03885 e968c53ea604b2f0d542295bb431e761 482 Gene3D G3DSA:3.40.605.10 7 265 1.1E-85 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMC99_RS03885 e968c53ea604b2f0d542295bb431e761 482 SUPERFAMILY SSF53720 5 478 7.98E-152 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMC99_RS03885 e968c53ea604b2f0d542295bb431e761 482 PANTHER PTHR11699 7 478 1.3E-180 T 20-04-2016 AMC99_RS06480 f1272fca5965d33514565dee24f912d0 114 Pfam PF07238 PilZ domain 15 93 3.3E-7 T 20-04-2016 IPR009875 PilZ domain GO:0035438 AMC99_RS06480 f1272fca5965d33514565dee24f912d0 114 SUPERFAMILY SSF141371 14 92 3.73E-7 T 20-04-2016 AMC99_RS05870 03c34d2806a88f16c6280248cee13137 152 Pfam PF07811 TadE-like protein 16 53 1.2E-6 T 20-04-2016 IPR012495 TadE-like AMC99_RS08160 2bbe2a01ad90f389a1b94e969f7b0baa 80 SUPERFAMILY SSF48295 5 69 5.18E-10 T 20-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 AMC99_RS08160 2bbe2a01ad90f389a1b94e969f7b0baa 80 Gene3D G3DSA:1.10.10.10 12 74 2.0E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS08160 2bbe2a01ad90f389a1b94e969f7b0baa 80 Pfam PF06627 Protein of unknown function (DUF1153) 12 73 5.2E-16 T 20-04-2016 IPR009534 Protein of unknown function DUF1153 AMC99_RS02630 40353ec7f4b0b7128bf4b0c1783e0a7a 294 SUPERFAMILY SSF51182 4 282 1.4E-71 T 20-04-2016 IPR011051 RmlC-like cupin domain AMC99_RS02630 40353ec7f4b0b7128bf4b0c1783e0a7a 294 PANTHER PTHR13903:SF4 1 286 1.5E-105 T 20-04-2016 AMC99_RS02630 40353ec7f4b0b7128bf4b0c1783e0a7a 294 PIRSF PIRSF006232 1 279 3.3E-75 T 20-04-2016 IPR012093 Pirin AMC99_RS02630 40353ec7f4b0b7128bf4b0c1783e0a7a 294 Gene3D G3DSA:2.60.120.10 9 241 5.6E-56 T 20-04-2016 IPR014710 RmlC-like jelly roll fold AMC99_RS02630 40353ec7f4b0b7128bf4b0c1783e0a7a 294 Pfam PF02678 Pirin 16 121 2.6E-33 T 20-04-2016 IPR003829 Pirin, N-terminal domain AMC99_RS02630 40353ec7f4b0b7128bf4b0c1783e0a7a 294 PANTHER PTHR13903 1 286 1.5E-105 T 20-04-2016 IPR012093 Pirin AMC99_RS02630 40353ec7f4b0b7128bf4b0c1783e0a7a 294 Pfam PF05726 Pirin C-terminal cupin domain 172 270 1.0E-18 T 20-04-2016 IPR008778 Pirin, C-terminal domain AMC99_RS04220 c51d9a6c4353ba60eefb2b5d213f6f04 244 PANTHER PTHR31040 5 239 9.6E-48 T 20-04-2016 AMC99_RS06555 73f669c29e54025c2a717975fc8cb9cb 289 Pfam PF04228 Putative neutral zinc metallopeptidase 12 284 4.3E-81 T 20-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AMC99_RS06555 73f669c29e54025c2a717975fc8cb9cb 289 PANTHER PTHR30168 1 288 4.7E-84 T 20-04-2016 AMC99_RS00330 8e3699400e4ca7bf769d48f0fa6485b6 577 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 281 527 5.8E-85 T 20-04-2016 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AMC99_RS13445 1b901a45d4726e6e7d80103a6b610dbe 188 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 8 182 1.9E-52 T 20-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 AMC99_RS13445 1b901a45d4726e6e7d80103a6b610dbe 188 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 13 173 1.0E-50 T 20-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 AMC99_RS13445 1b901a45d4726e6e7d80103a6b610dbe 188 PANTHER PTHR12213 1 183 9.4E-70 T 20-04-2016 AMC99_RS13445 1b901a45d4726e6e7d80103a6b610dbe 188 SUPERFAMILY SSF89028 6 183 1.63E-57 T 20-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AMC99_RS13445 1b901a45d4726e6e7d80103a6b610dbe 188 Gene3D G3DSA:1.20.1200.10 17 186 1.7E-58 T 20-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AMC99_RS13445 1b901a45d4726e6e7d80103a6b610dbe 188 Pfam PF01923 Cobalamin adenosyltransferase 7 170 3.9E-57 T 20-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AMC99_RS02370 4daa6911bb6926d19427c5c4e86d6c03 258 SUPERFAMILY SSF56529 4 257 3.32E-39 T 20-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMC99_RS02370 4daa6911bb6926d19427c5c4e86d6c03 258 Gene3D G3DSA:3.90.850.10 5 257 7.1E-45 T 20-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMC99_RS02370 4daa6911bb6926d19427c5c4e86d6c03 258 PANTHER PTHR30143 3 257 4.8E-38 T 20-04-2016 AMC99_RS10125 bc0ad5e357c8231facaf888b6bad7788 378 PANTHER PTHR24023:SF591 49 354 1.2E-94 T 20-04-2016 AMC99_RS10125 bc0ad5e357c8231facaf888b6bad7788 378 Gene3D G3DSA:3.40.50.10540 16 317 2.2E-86 T 20-04-2016 IPR023606 CoA-transferase family III domain AMC99_RS10125 bc0ad5e357c8231facaf888b6bad7788 378 Pfam PF02515 CoA-transferase family III 19 354 4.4E-70 T 20-04-2016 IPR003673 CoA-transferase family III GO:0003824 AMC99_RS10125 bc0ad5e357c8231facaf888b6bad7788 378 SUPERFAMILY SSF89796 17 359 3.01E-97 T 20-04-2016 IPR023606 CoA-transferase family III domain AMC99_RS10125 bc0ad5e357c8231facaf888b6bad7788 378 PANTHER PTHR24023 49 354 1.2E-94 T 20-04-2016 AMC99_RS04905 7ac781a54a24856bfb692f66785f0ce8 474 Pfam PF00209 Sodium:neurotransmitter symporter family 171 377 1.8E-22 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMC99_RS04905 7ac781a54a24856bfb692f66785f0ce8 474 Pfam PF00209 Sodium:neurotransmitter symporter family 11 125 2.2E-24 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMC99_RS04905 7ac781a54a24856bfb692f66785f0ce8 474 PANTHER PTHR11616:SF167 398 469 6.7E-126 T 20-04-2016 AMC99_RS04905 7ac781a54a24856bfb692f66785f0ce8 474 PANTHER PTHR11616:SF167 11 379 6.7E-126 T 20-04-2016 AMC99_RS04905 7ac781a54a24856bfb692f66785f0ce8 474 SUPERFAMILY SSF161070 9 469 7.32E-121 T 20-04-2016 AMC99_RS04905 7ac781a54a24856bfb692f66785f0ce8 474 PANTHER PTHR11616 398 469 6.7E-126 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMC99_RS04905 7ac781a54a24856bfb692f66785f0ce8 474 PANTHER PTHR11616 11 379 6.7E-126 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMC99_RS04905 7ac781a54a24856bfb692f66785f0ce8 474 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 332 352 1.5E-11 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMC99_RS04905 7ac781a54a24856bfb692f66785f0ce8 474 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 16 37 1.5E-11 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMC99_RS04905 7ac781a54a24856bfb692f66785f0ce8 474 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 45 64 1.5E-11 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMC99_RS04905 7ac781a54a24856bfb692f66785f0ce8 474 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 456 474 1.5E-11 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMC99_RS08055 5e166717d392c6f6e60d120ad0705fa4 611 TIGRFAM TIGR01651 CobT: cobaltochelatase, CobT subunit 8 606 3.7E-250 T 20-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMC99_RS08055 5e166717d392c6f6e60d120ad0705fa4 611 PIRSF PIRSF031715 1 611 2.5E-247 T 20-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMC99_RS08055 5e166717d392c6f6e60d120ad0705fa4 611 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 388 604 4.9E-106 T 20-04-2016 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMC99_RS08055 5e166717d392c6f6e60d120ad0705fa4 611 Pfam PF06213 Cobalamin biosynthesis protein CobT 5 275 3.5E-87 T 20-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMC99_RS08055 5e166717d392c6f6e60d120ad0705fa4 611 SMART SM00327 398 600 0.0056 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS08055 5e166717d392c6f6e60d120ad0705fa4 611 SUPERFAMILY SSF53300 401 595 3.2E-14 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS08055 5e166717d392c6f6e60d120ad0705fa4 611 Gene3D G3DSA:3.40.50.410 401 576 2.0E-4 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS12575 c849fe9b111c9e963de601c9a50e667a 579 SUPERFAMILY SSF63737 55 237 1.57E-18 T 20-04-2016 AMC99_RS12575 c849fe9b111c9e963de601c9a50e667a 579 SUPERFAMILY SSF55486 251 490 4.21E-43 T 20-04-2016 AMC99_RS12575 c849fe9b111c9e963de601c9a50e667a 579 PANTHER PTHR11533:SF185 56 490 1.8E-41 T 20-04-2016 AMC99_RS12575 c849fe9b111c9e963de601c9a50e667a 579 PANTHER PTHR11533 56 490 1.8E-41 T 20-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 AMC99_RS12575 c849fe9b111c9e963de601c9a50e667a 579 Gene3D G3DSA:1.10.390.10 342 492 6.4E-16 T 20-04-2016 AMC99_RS12575 c849fe9b111c9e963de601c9a50e667a 579 Pfam PF01433 Peptidase family M1 56 366 3.1E-20 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_RS03290 2ba3be87795b7306a315b1f123c37d2a 90 PANTHER PTHR33175 1 90 8.5E-41 T 20-04-2016 AMC99_RS03290 2ba3be87795b7306a315b1f123c37d2a 90 SMART SM00411 1 90 1.6E-43 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_RS03290 2ba3be87795b7306a315b1f123c37d2a 90 SUPERFAMILY SSF47729 1 90 9.86E-33 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMC99_RS03290 2ba3be87795b7306a315b1f123c37d2a 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.0E-34 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_RS03290 2ba3be87795b7306a315b1f123c37d2a 90 Gene3D G3DSA:4.10.520.10 1 90 3.8E-37 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMC99_RS03290 2ba3be87795b7306a315b1f123c37d2a 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.3E-16 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_RS03290 2ba3be87795b7306a315b1f123c37d2a 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.3E-16 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_RS03290 2ba3be87795b7306a315b1f123c37d2a 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.3E-16 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_RS03290 2ba3be87795b7306a315b1f123c37d2a 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 20-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 ProSitePatterns PS00321 recA signature. 224 232 - T 20-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 PRINTS PR00142 RecA protein signature 104 133 1.8E-86 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 PRINTS PR00142 RecA protein signature 308 325 1.8E-86 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 PRINTS PR00142 RecA protein signature 176 205 1.8E-86 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 PRINTS PR00142 RecA protein signature 138 167 1.8E-86 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 PRINTS PR00142 RecA protein signature 254 283 1.8E-86 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 PRINTS PR00142 RecA protein signature 221 249 1.8E-86 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 SUPERFAMILY SSF54752 279 335 3.66E-21 T 20-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 15 334 3.0E-175 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 SMART SM00382 68 239 1.0E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 Gene3D G3DSA:3.40.50.300 39 278 2.4E-86 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 Gene3D G3DSA:3.30.250.10 279 335 1.4E-26 T 20-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 Pfam PF00154 recA bacterial DNA recombination protein 18 279 3.4E-147 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 SUPERFAMILY SSF52540 16 278 3.77E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 PANTHER PTHR22942:SF1 16 346 5.3E-203 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 Hamap MF_00268 Protein RecA [recA]. 16 340 52.248 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_RS07155 7fbc58d97316291c68bbe8a9a79bac2b 352 PANTHER PTHR22942 16 346 5.3E-203 T 20-04-2016 AMC99_RS12345 f1868157ae2c579a36f492e76b485b73 224 PANTHER PTHR21666:SF178 99 224 3.6E-13 T 20-04-2016 AMC99_RS12345 f1868157ae2c579a36f492e76b485b73 224 Pfam PF07486 Cell Wall Hydrolase 119 223 4.4E-27 T 20-04-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 AMC99_RS12345 f1868157ae2c579a36f492e76b485b73 224 PANTHER PTHR21666 99 224 3.6E-13 T 20-04-2016 AMC99_RS03945 4fcfb8797bd83dfed4ced184072a7854 564 PANTHER PTHR10166 150 441 1.0E-107 T 20-04-2016 AMC99_RS03945 4fcfb8797bd83dfed4ced184072a7854 564 PANTHER PTHR10166:SF15 150 441 1.0E-107 T 20-04-2016 AMC99_RS03945 4fcfb8797bd83dfed4ced184072a7854 564 Gene3D G3DSA:3.40.50.410 200 375 8.4E-27 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS03945 4fcfb8797bd83dfed4ced184072a7854 564 Pfam PF12450 von Willebrand factor 95 188 1.2E-35 T 20-04-2016 IPR022156 Uncharacterised protein YfbK, N-terminal AMC99_RS03945 4fcfb8797bd83dfed4ced184072a7854 564 SMART SM00327 203 377 3.5E-28 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS03945 4fcfb8797bd83dfed4ced184072a7854 564 SUPERFAMILY SSF53300 200 374 3.01E-38 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS03945 4fcfb8797bd83dfed4ced184072a7854 564 Pfam PF00092 von Willebrand factor type A domain 205 366 4.0E-19 T 20-04-2016 IPR002035 von Willebrand factor, type A AMC99_RS03945 4fcfb8797bd83dfed4ced184072a7854 564 Pfam PF12034 Domain of unknown function (DUF3520) 379 555 2.7E-60 T 20-04-2016 IPR021908 Protein of unknown function DUF3520 AMC99_RS09420 d21a08ee3764c555ecde540f82174697 335 PANTHER PTHR35007:SF2 18 331 2.0E-63 T 20-04-2016 AMC99_RS09420 d21a08ee3764c555ecde540f82174697 335 PANTHER PTHR35007 18 331 2.0E-63 T 20-04-2016 AMC99_RS09420 d21a08ee3764c555ecde540f82174697 335 Pfam PF00482 Type II secretion system (T2SS), protein F 190 318 8.6E-20 T 20-04-2016 IPR018076 Type II secretion system F domain AMC99_RS07505 85b355c98da0ac602aa1a9fc12b885f0 72 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 3 64 16.726 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07505 85b355c98da0ac602aa1a9fc12b885f0 72 Pfam PF00831 Ribosomal L29 protein 9 64 1.7E-23 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07505 85b355c98da0ac602aa1a9fc12b885f0 72 PANTHER PTHR10916 7 65 8.0E-22 T 20-04-2016 AMC99_RS07505 85b355c98da0ac602aa1a9fc12b885f0 72 TIGRFAM TIGR00012 L29: ribosomal protein uL29 9 64 1.3E-21 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07505 85b355c98da0ac602aa1a9fc12b885f0 72 SUPERFAMILY SSF46561 7 65 5.63E-20 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07505 85b355c98da0ac602aa1a9fc12b885f0 72 Gene3D G3DSA:1.10.287.310 7 65 1.9E-25 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS08590 ba995b20597ec325d38f8c32abb04607 202 SUPERFAMILY SSF55811 33 189 1.76E-38 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS08590 ba995b20597ec325d38f8c32abb04607 202 Gene3D G3DSA:3.90.79.10 35 193 4.4E-47 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS08590 ba995b20597ec325d38f8c32abb04607 202 Pfam PF00293 NUDIX domain 38 151 4.5E-18 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMC99_RS08590 ba995b20597ec325d38f8c32abb04607 202 PANTHER PTHR12992 17 193 1.6E-49 T 20-04-2016 AMC99_RS12570 abdd277b7285efe701cd1c8b99237c69 334 Gene3D G3DSA:3.60.15.10 31 188 4.7E-18 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS12570 abdd277b7285efe701cd1c8b99237c69 334 PANTHER PTHR11203:SF35 8 334 1.9E-66 T 20-04-2016 AMC99_RS12570 abdd277b7285efe701cd1c8b99237c69 334 SUPERFAMILY SSF56281 9 328 5.77E-61 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS12570 abdd277b7285efe701cd1c8b99237c69 334 PANTHER PTHR11203 8 334 1.9E-66 T 20-04-2016 AMC99_RS12570 abdd277b7285efe701cd1c8b99237c69 334 Pfam PF00753 Metallo-beta-lactamase superfamily 31 171 7.0E-5 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS12570 abdd277b7285efe701cd1c8b99237c69 334 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 7 332 2.7E-133 T 20-04-2016 IPR026360 Putative exonuclease, DNA ligase-associated AMC99_RS04805 58a2c39ef3856a75d59797e41d63c5d2 216 Gene3D G3DSA:3.20.20.70 3 213 4.6E-57 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS04805 58a2c39ef3856a75d59797e41d63c5d2 216 Pfam PF02581 Thiamine monophosphate synthase/TENI 15 197 2.6E-52 T 20-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AMC99_RS04805 58a2c39ef3856a75d59797e41d63c5d2 216 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 15 205 5.3E-54 T 20-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AMC99_RS04805 58a2c39ef3856a75d59797e41d63c5d2 216 PANTHER PTHR20857:SF15 2 215 1.2E-46 T 20-04-2016 AMC99_RS04805 58a2c39ef3856a75d59797e41d63c5d2 216 PANTHER PTHR20857 2 215 1.2E-46 T 20-04-2016 AMC99_RS04805 58a2c39ef3856a75d59797e41d63c5d2 216 SUPERFAMILY SSF51391 6 206 7.32E-58 T 20-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AMC99_RS04805 58a2c39ef3856a75d59797e41d63c5d2 216 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 13 214 22.834 T 20-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AMC99_RS03070 819a4e09e685ea2a0579bbe083ed398c 99 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 15 96 7.1E-9 T 20-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AMC99_RS03070 819a4e09e685ea2a0579bbe083ed398c 99 SUPERFAMILY SSF55961 17 96 2.03E-10 T 20-04-2016 AMC99_RS03070 819a4e09e685ea2a0579bbe083ed398c 99 Gene3D G3DSA:3.30.530.20 17 96 2.6E-7 T 20-04-2016 IPR023393 START-like domain AMC99_RS07425 94719d15ce741bfa9370e48cba67f690 122 SUPERFAMILY SSF46946 2 121 1.39E-45 T 20-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMC99_RS07425 94719d15ce741bfa9370e48cba67f690 122 PANTHER PTHR10871 2 122 1.1E-61 T 20-04-2016 AMC99_RS07425 94719d15ce741bfa9370e48cba67f690 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 4.8E-52 T 20-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07425 94719d15ce741bfa9370e48cba67f690 122 Gene3D G3DSA:1.10.8.50 2 72 1.5E-30 T 20-04-2016 AMC99_RS07425 94719d15ce741bfa9370e48cba67f690 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 29.341 T 20-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07425 94719d15ce741bfa9370e48cba67f690 122 PIRSF PIRSF002134 1 122 3.2E-45 T 20-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07425 94719d15ce741bfa9370e48cba67f690 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 2.3E-32 T 20-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS07425 94719d15ce741bfa9370e48cba67f690 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 20-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_RS07425 94719d15ce741bfa9370e48cba67f690 122 Gene3D G3DSA:4.10.910.10 74 122 8.0E-27 T 20-04-2016 IPR027437 30s ribosomal protein S13, C-terminal AMC99_RS03610 e588729fdee63a4e4c164fda19f89459 316 Pfam PF04338 Protein of unknown function, DUF481 102 316 1.5E-57 T 20-04-2016 IPR007433 Protein of unknown function DUF481 AMC99_RS03610 e588729fdee63a4e4c164fda19f89459 316 SUPERFAMILY SSF103515 126 295 1.57E-6 T 20-04-2016 IPR005546 Autotransporter beta-domain AMC99_RS11425 0d7701717977729d602d27192e81919b 524 PANTHER PTHR30121 16 445 1.1E-166 T 20-04-2016 AMC99_RS11425 0d7701717977729d602d27192e81919b 524 PANTHER PTHR30121:SF3 16 445 1.1E-166 T 20-04-2016 AMC99_RS11425 0d7701717977729d602d27192e81919b 524 Pfam PF05872 Bacterial protein of unknown function (DUF853) 10 522 5.4E-219 T 20-04-2016 IPR033186 Helicase HerA-like C-terminal AMC99_RS11425 0d7701717977729d602d27192e81919b 524 SUPERFAMILY SSF52540 95 387 3.35E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11425 0d7701717977729d602d27192e81919b 524 SUPERFAMILY SSF52540 4 67 3.35E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11425 0d7701717977729d602d27192e81919b 524 SMART SM00382 22 330 0.004 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS11425 0d7701717977729d602d27192e81919b 524 Gene3D G3DSA:3.40.50.300 5 112 6.5E-61 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11425 0d7701717977729d602d27192e81919b 524 Gene3D G3DSA:3.40.50.300 208 385 6.5E-61 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12210 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 483 500 1.0E-61 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMC99_RS12210 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 160 179 1.0E-61 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMC99_RS12210 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 400 418 1.0E-61 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMC99_RS12210 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 458 473 1.0E-61 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMC99_RS12210 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 68 93 1.0E-61 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMC99_RS12210 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 142 160 1.0E-61 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMC99_RS12210 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 292 311 1.0E-61 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMC99_RS12210 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 262 278 1.0E-61 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMC99_RS12210 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 422 440 1.0E-61 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMC99_RS12210 5de5fc2f58a0d657826d9d856836f6f6 581 Pfam PF01019 Gamma-glutamyltranspeptidase 61 573 2.2E-138 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMC99_RS12210 5de5fc2f58a0d657826d9d856836f6f6 581 PANTHER PTHR11686 41 575 1.1E-156 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMC99_RS12210 5de5fc2f58a0d657826d9d856836f6f6 581 SUPERFAMILY SSF56235 42 573 2.12E-149 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_RS12210 5de5fc2f58a0d657826d9d856836f6f6 581 PANTHER PTHR11686:SF27 41 575 1.1E-156 T 20-04-2016 AMC99_RS12210 5de5fc2f58a0d657826d9d856836f6f6 581 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 48 573 3.5E-115 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMC99_RS05810 7af0da8e8aa9174d3c7edf2d55e07dba 153 PANTHER PTHR12901 10 143 3.2E-46 T 20-04-2016 AMC99_RS05810 7af0da8e8aa9174d3c7edf2d55e07dba 153 Gene3D G3DSA:3.30.530.20 2 143 1.3E-47 T 20-04-2016 IPR023393 START-like domain AMC99_RS05810 7af0da8e8aa9174d3c7edf2d55e07dba 153 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.4E-31 T 20-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain AMC99_RS05810 7af0da8e8aa9174d3c7edf2d55e07dba 153 SUPERFAMILY SSF55961 1 143 1.43E-33 T 20-04-2016 AMC99_RS06390 b3bcc54279d547424406b4642d5a07b7 270 PIRSF PIRSF010376 2 269 1.4E-63 T 20-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS06390 b3bcc54279d547424406b4642d5a07b7 270 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 268 26.527 T 20-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS06390 b3bcc54279d547424406b4642d5a07b7 270 PANTHER PTHR20861:SF2 7 263 2.2E-48 T 20-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS06390 b3bcc54279d547424406b4642d5a07b7 270 Gene3D G3DSA:3.30.230.10 6 152 2.9E-39 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_RS06390 b3bcc54279d547424406b4642d5a07b7 270 SUPERFAMILY SSF55060 156 264 1.4E-23 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain AMC99_RS06390 b3bcc54279d547424406b4642d5a07b7 270 Gene3D G3DSA:3.30.70.890 158 265 1.8E-21 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain AMC99_RS06390 b3bcc54279d547424406b4642d5a07b7 270 Pfam PF00288 GHMP kinases N terminal domain 84 139 6.1E-6 T 20-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMC99_RS06390 b3bcc54279d547424406b4642d5a07b7 270 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 249 9.0E-43 T 20-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 AMC99_RS06390 b3bcc54279d547424406b4642d5a07b7 270 PANTHER PTHR20861 7 263 2.2E-48 T 20-04-2016 AMC99_RS06390 b3bcc54279d547424406b4642d5a07b7 270 SUPERFAMILY SSF54211 5 152 1.37E-28 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS06390 b3bcc54279d547424406b4642d5a07b7 270 Pfam PF08544 GHMP kinases C terminal 202 255 2.2E-7 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain AMC99_RS03110 9edbfff2e5bc916336d839acce1fe7f9 333 Gene3D G3DSA:3.20.20.370 123 284 3.2E-9 T 20-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_RS03110 9edbfff2e5bc916336d839acce1fe7f9 333 SUPERFAMILY SSF88713 84 220 2.11E-7 T 20-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_RS02480 cb168743e8a07d08fbf0e50c0bb812c7 89 Pfam PF13937 Domain of unknown function (DUF4212) 13 87 1.3E-31 T 20-04-2016 IPR019886 Sodium symporter small subunit, predicted AMC99_RS02480 cb168743e8a07d08fbf0e50c0bb812c7 89 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 13 89 3.5E-34 T 20-04-2016 IPR019886 Sodium symporter small subunit, predicted AMC99_RS12315 dc405d2c84d5607e1c7aeeaad21e8f2c 163 Pfam PF10691 Protein of unknown function (DUF2497) 86 159 2.3E-25 T 20-04-2016 IPR019632 Protein of unknown function DUF2497 AMC99_RS00700 bd02b75c94d560ca405ffec27c241072 211 Pfam PF07298 NnrU protein 3 208 1.5E-51 T 20-04-2016 IPR009915 NnrU domain AMC99_RS02200 b36c78d869ce90abb082d80308a21567 285 PANTHER PTHR10755 10 284 7.5E-107 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMC99_RS02200 b36c78d869ce90abb082d80308a21567 285 PIRSF PIRSF000166 2 285 4.4E-104 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMC99_RS02200 b36c78d869ce90abb082d80308a21567 285 SUPERFAMILY SSF102886 3 284 8.37E-105 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMC99_RS02200 b36c78d869ce90abb082d80308a21567 285 Gene3D G3DSA:3.40.1500.10 5 284 1.9E-105 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMC99_RS02200 b36c78d869ce90abb082d80308a21567 285 Pfam PF01218 Coproporphyrinogen III oxidase 12 285 1.0E-88 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMC99_RS02200 b36c78d869ce90abb082d80308a21567 285 PRINTS PR00073 Coprogen oxidase signature 167 196 1.7E-43 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMC99_RS02200 b36c78d869ce90abb082d80308a21567 285 PRINTS PR00073 Coprogen oxidase signature 242 269 1.7E-43 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMC99_RS02200 b36c78d869ce90abb082d80308a21567 285 PRINTS PR00073 Coprogen oxidase signature 37 53 1.7E-43 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMC99_RS02200 b36c78d869ce90abb082d80308a21567 285 PRINTS PR00073 Coprogen oxidase signature 101 125 1.7E-43 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMC99_RS02200 b36c78d869ce90abb082d80308a21567 285 PRINTS PR00073 Coprogen oxidase signature 270 285 1.7E-43 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMC99_RS00595 0074ba05ba48481a5123bb24babe62c9 657 PANTHER PTHR21075 240 648 4.0E-161 T 20-04-2016 AMC99_RS00595 0074ba05ba48481a5123bb24babe62c9 657 PANTHER PTHR21075 28 215 4.0E-161 T 20-04-2016 AMC99_RS00595 0074ba05ba48481a5123bb24babe62c9 657 Gene3D G3DSA:3.20.70.20 45 193 3.5E-182 T 20-04-2016 AMC99_RS00595 0074ba05ba48481a5123bb24babe62c9 657 Gene3D G3DSA:3.20.70.20 241 625 3.5E-182 T 20-04-2016 AMC99_RS00595 0074ba05ba48481a5123bb24babe62c9 657 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 39 641 1.1E-133 T 20-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AMC99_RS00595 0074ba05ba48481a5123bb24babe62c9 657 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 40 642 6.0E-175 T 20-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AMC99_RS00595 0074ba05ba48481a5123bb24babe62c9 657 SUPERFAMILY SSF51998 40 626 1.01E-140 T 20-04-2016 AMC99_RS04910 7ad0964bd8379938f43b6de6110077c5 160 SUPERFAMILY SSF50475 10 132 5.78E-19 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMC99_RS04910 7ad0964bd8379938f43b6de6110077c5 160 Gene3D G3DSA:2.30.110.10 9 155 7.3E-35 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMC99_RS04910 7ad0964bd8379938f43b6de6110077c5 160 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 13 144 2.9E-26 T 20-04-2016 AMC99_RS04910 7ad0964bd8379938f43b6de6110077c5 160 PANTHER PTHR34818 7 153 6.3E-16 T 20-04-2016 AMC99_RS02325 f57e2c90f690473b92c8e24c5e97c01c 411 SUPERFAMILY SSF56601 15 399 1.16E-84 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS02325 f57e2c90f690473b92c8e24c5e97c01c 411 Gene3D G3DSA:3.40.710.10 8 403 1.8E-82 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS02325 f57e2c90f690473b92c8e24c5e97c01c 411 PANTHER PTHR22935:SF77 15 411 1.2E-95 T 20-04-2016 AMC99_RS02325 f57e2c90f690473b92c8e24c5e97c01c 411 Pfam PF00144 Beta-lactamase 26 389 8.6E-63 T 20-04-2016 IPR001466 Beta-lactamase-related AMC99_RS02325 f57e2c90f690473b92c8e24c5e97c01c 411 PANTHER PTHR22935 15 411 1.2E-95 T 20-04-2016 AMC99_RS04080 565afd8d48bfe12b0160fdf944082be2 151 PANTHER PTHR34980 1 144 2.5E-28 T 20-04-2016 AMC99_RS04080 565afd8d48bfe12b0160fdf944082be2 151 Pfam PF05656 Protein of unknown function (DUF805) 11 141 6.2E-31 T 20-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 AMC99_RS04350 e1cc9f6da5bc0262531bf50d94d9d9a7 257 SUPERFAMILY SSF56281 11 224 3.45E-6 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS02400 5bd8ad042d6a5eb0621699885aaa20e4 114 Pfam PF07883 Cupin domain 45 108 5.8E-8 T 20-04-2016 IPR013096 Cupin 2, conserved barrel AMC99_RS02400 5bd8ad042d6a5eb0621699885aaa20e4 114 Gene3D G3DSA:2.60.120.10 36 110 6.7E-15 T 20-04-2016 IPR014710 RmlC-like jelly roll fold AMC99_RS02400 5bd8ad042d6a5eb0621699885aaa20e4 114 SUPERFAMILY SSF51182 13 110 6.14E-15 T 20-04-2016 IPR011051 RmlC-like cupin domain AMC99_RS08350 458323c914cc28dab989d7aeacbd2983 260 SUPERFAMILY SSF55811 128 198 3.83E-16 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS08350 458323c914cc28dab989d7aeacbd2983 260 SUPERFAMILY SSF55811 9 90 3.83E-16 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS08350 458323c914cc28dab989d7aeacbd2983 260 Gene3D G3DSA:3.90.79.10 6 90 4.0E-17 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS08350 458323c914cc28dab989d7aeacbd2983 260 Gene3D G3DSA:3.90.79.10 128 198 4.0E-17 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS08350 458323c914cc28dab989d7aeacbd2983 260 PANTHER PTHR12318:SF0 13 233 2.9E-22 T 20-04-2016 AMC99_RS08350 458323c914cc28dab989d7aeacbd2983 260 PANTHER PTHR12318 13 233 2.9E-22 T 20-04-2016 AMC99_RS08350 458323c914cc28dab989d7aeacbd2983 260 Pfam PF00293 NUDIX domain 14 92 1.8E-6 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMC99_RS11520 10e92e6dfd89be8894947128c13e8741 263 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 7 230 4.0E-91 T 20-04-2016 IPR022488 Polyphosphate kinase-2-related AMC99_RS11520 10e92e6dfd89be8894947128c13e8741 263 PIRSF PIRSF028756 3 253 5.8E-106 T 20-04-2016 IPR016898 Polyphosphate kinase 2 AMC99_RS11520 10e92e6dfd89be8894947128c13e8741 263 PANTHER PTHR34383:SF1 6 238 4.3E-130 T 20-04-2016 AMC99_RS11520 10e92e6dfd89be8894947128c13e8741 263 Gene3D G3DSA:3.40.50.300 5 238 1.1E-94 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11520 10e92e6dfd89be8894947128c13e8741 263 SUPERFAMILY SSF52540 37 224 3.9E-27 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11520 10e92e6dfd89be8894947128c13e8741 263 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 6 231 8.7E-102 T 20-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 AMC99_RS11520 10e92e6dfd89be8894947128c13e8741 263 PANTHER PTHR34383 6 238 4.3E-130 T 20-04-2016 AMC99_RS11955 3437e9dc75ff1d7fb5b5a120c338ebfc 400 Pfam PF07690 Major Facilitator Superfamily 230 397 3.9E-13 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS11955 3437e9dc75ff1d7fb5b5a120c338ebfc 400 Gene3D G3DSA:1.20.1250.20 12 190 6.7E-14 T 20-04-2016 AMC99_RS11955 3437e9dc75ff1d7fb5b5a120c338ebfc 400 Gene3D G3DSA:1.20.1250.20 215 398 1.5E-17 T 20-04-2016 AMC99_RS11955 3437e9dc75ff1d7fb5b5a120c338ebfc 400 SUPERFAMILY SSF103473 12 398 1.57E-38 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS10835 f43447257d8abcb3cc962af795bfbc32 390 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 192 374 3.3E-37 T 20-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AMC99_RS10835 f43447257d8abcb3cc962af795bfbc32 390 PANTHER PTHR21266 21 376 5.7E-72 T 20-04-2016 AMC99_RS10835 f43447257d8abcb3cc962af795bfbc32 390 SUPERFAMILY SSF50022 16 157 9.3E-49 T 20-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMC99_RS10835 f43447257d8abcb3cc962af795bfbc32 390 SUPERFAMILY SSF55961 159 375 7.85E-40 T 20-04-2016 AMC99_RS10835 f43447257d8abcb3cc962af795bfbc32 390 Pfam PF00355 Rieske [2Fe-2S] domain 43 129 4.7E-20 T 20-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMC99_RS10835 f43447257d8abcb3cc962af795bfbc32 390 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 3.6E-20 T 20-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AMC99_RS10835 f43447257d8abcb3cc962af795bfbc32 390 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 141 167 3.6E-20 T 20-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AMC99_RS10835 f43447257d8abcb3cc962af795bfbc32 390 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 3.6E-20 T 20-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AMC99_RS10835 f43447257d8abcb3cc962af795bfbc32 390 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 3.6E-20 T 20-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AMC99_RS10835 f43447257d8abcb3cc962af795bfbc32 390 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 28 53 3.6E-20 T 20-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AMC99_RS10835 f43447257d8abcb3cc962af795bfbc32 390 Gene3D G3DSA:3.90.380.10 148 358 1.4E-20 T 20-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AMC99_RS10835 f43447257d8abcb3cc962af795bfbc32 390 Gene3D G3DSA:2.102.10.10 43 147 7.4E-38 T 20-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMC99_RS10835 f43447257d8abcb3cc962af795bfbc32 390 PANTHER PTHR21266:SF2 21 376 5.7E-72 T 20-04-2016 AMC99_RS01355 8cd212fe7c0b42b77181cee9fa081f46 295 PRINTS PR01270 Histone deacetylase superfamily signature 104 127 7.2E-14 T 20-04-2016 IPR000286 Histone deacetylase superfamily AMC99_RS01355 8cd212fe7c0b42b77181cee9fa081f46 295 PRINTS PR01270 Histone deacetylase superfamily signature 138 153 7.2E-14 T 20-04-2016 IPR000286 Histone deacetylase superfamily AMC99_RS01355 8cd212fe7c0b42b77181cee9fa081f46 295 PRINTS PR01270 Histone deacetylase superfamily signature 212 222 7.2E-14 T 20-04-2016 IPR000286 Histone deacetylase superfamily AMC99_RS01355 8cd212fe7c0b42b77181cee9fa081f46 295 PANTHER PTHR10625:SF131 10 281 2.2E-92 T 20-04-2016 AMC99_RS01355 8cd212fe7c0b42b77181cee9fa081f46 295 SUPERFAMILY SSF52768 9 274 1.39E-71 T 20-04-2016 AMC99_RS01355 8cd212fe7c0b42b77181cee9fa081f46 295 Pfam PF00850 Histone deacetylase domain 18 274 7.0E-45 T 20-04-2016 IPR023801 Histone deacetylase domain AMC99_RS01355 8cd212fe7c0b42b77181cee9fa081f46 295 Gene3D G3DSA:3.40.800.20 14 281 2.5E-54 T 20-04-2016 IPR023801 Histone deacetylase domain AMC99_RS01355 8cd212fe7c0b42b77181cee9fa081f46 295 PANTHER PTHR10625 10 281 2.2E-92 T 20-04-2016 IPR000286 Histone deacetylase superfamily AMC99_RS13555 3c0aa392dc6566f006ee10d6d110a3d0 222 Pfam PF13763 Domain of unknown function (DUF4167) 5 78 6.2E-26 T 20-04-2016 IPR025430 Domain of unknown function DUF4167 AMC99_RS11870 16075260e47ced48a41a9291d7dca62b 459 PANTHER PTHR11271 22 436 1.3E-28 T 20-04-2016 AMC99_RS11870 16075260e47ced48a41a9291d7dca62b 459 SUPERFAMILY SSF51556 110 401 5.44E-26 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS11870 16075260e47ced48a41a9291d7dca62b 459 SUPERFAMILY SSF51338 400 436 5.28E-22 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS11870 16075260e47ced48a41a9291d7dca62b 459 SUPERFAMILY SSF51338 49 111 5.28E-22 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS11870 16075260e47ced48a41a9291d7dca62b 459 Gene3D G3DSA:2.30.40.10 45 164 3.0E-26 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS11870 16075260e47ced48a41a9291d7dca62b 459 Pfam PF01979 Amidohydrolase family 265 431 8.6E-12 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMC99_RS11870 16075260e47ced48a41a9291d7dca62b 459 Gene3D G3DSA:2.30.40.10 306 342 5.6E-24 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS11870 16075260e47ced48a41a9291d7dca62b 459 Gene3D G3DSA:2.30.40.10 376 435 5.6E-24 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS11870 16075260e47ced48a41a9291d7dca62b 459 PANTHER PTHR11271:SF39 22 436 1.3E-28 T 20-04-2016 AMC99_RS08520 731d75b779af72c3eaf2e5b640edd7ad 533 Pfam PF02233 NAD(P) transhydrogenase beta subunit 43 530 3.8E-189 T 20-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AMC99_RS08520 731d75b779af72c3eaf2e5b640edd7ad 533 PANTHER PTHR10160:SF24 121 532 7.1E-235 T 20-04-2016 AMC99_RS08520 731d75b779af72c3eaf2e5b640edd7ad 533 SUPERFAMILY SSF52467 360 532 1.19E-72 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMC99_RS08520 731d75b779af72c3eaf2e5b640edd7ad 533 PANTHER PTHR10160:SF24 42 93 7.1E-235 T 20-04-2016 AMC99_RS08520 731d75b779af72c3eaf2e5b640edd7ad 533 PANTHER PTHR10160 121 532 7.1E-235 T 20-04-2016 AMC99_RS08520 731d75b779af72c3eaf2e5b640edd7ad 533 PANTHER PTHR10160 42 93 7.1E-235 T 20-04-2016 AMC99_RS08520 731d75b779af72c3eaf2e5b640edd7ad 533 Gene3D G3DSA:3.40.50.1220 356 532 1.7E-83 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMC99_RS03655 8e96d9eca06d189311bba7494ea559f2 65 Pfam PF13347 MFS/sugar transport protein 1 60 1.6E-13 T 20-04-2016 AMC99_RS03655 8e96d9eca06d189311bba7494ea559f2 65 Gene3D G3DSA:1.20.1250.20 1 42 7.1E-4 T 20-04-2016 AMC99_RS13290 2c1ef3ca535417a5eda12d3bebd8e401 184 PANTHER PTHR10003 38 179 5.7E-27 T 20-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 AMC99_RS13290 2c1ef3ca535417a5eda12d3bebd8e401 184 SUPERFAMILY SSF49329 40 180 9.29E-38 T 20-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMC99_RS13290 2c1ef3ca535417a5eda12d3bebd8e401 184 Gene3D G3DSA:2.60.40.200 40 181 1.0E-38 T 20-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMC99_RS13290 2c1ef3ca535417a5eda12d3bebd8e401 184 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 46 179 3.8E-33 T 20-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMC99_RS13290 2c1ef3ca535417a5eda12d3bebd8e401 184 PANTHER PTHR10003:SF11 38 179 5.7E-27 T 20-04-2016 AMC99_RS06975 0ffac10ac3cf374382ee39f8ca13d2d4 164 Pfam PF00430 ATP synthase B/B' CF(0) 16 143 2.7E-17 T 20-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMC99_RS06975 0ffac10ac3cf374382ee39f8ca13d2d4 164 Hamap MF_01398 ATP synthase subunit b [atpF]. 7 164 9.52 T 20-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMC99_RS03180 da23373016f7daac1b8ce0a3b9a3b061 325 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 13 304 27.054 T 20-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMC99_RS03180 da23373016f7daac1b8ce0a3b9a3b061 325 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 127 290 1.3E-47 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMC99_RS03180 da23373016f7daac1b8ce0a3b9a3b061 325 Gene3D G3DSA:1.20.1640.10 115 301 3.4E-25 T 20-04-2016 AMC99_RS03180 da23373016f7daac1b8ce0a3b9a3b061 325 Pfam PF07549 SecD/SecF GG Motif 37 60 1.8E-6 T 20-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMC99_RS03180 da23373016f7daac1b8ce0a3b9a3b061 325 SUPERFAMILY SSF82866 77 301 8.37E-40 T 20-04-2016 AMC99_RS03180 da23373016f7daac1b8ce0a3b9a3b061 325 PANTHER PTHR30081 4 325 3.1E-74 T 20-04-2016 AMC99_RS03180 da23373016f7daac1b8ce0a3b9a3b061 325 Pfam PF02355 Protein export membrane protein 119 301 9.6E-66 T 20-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMC99_RS03180 da23373016f7daac1b8ce0a3b9a3b061 325 PRINTS PR01755 Bacterial translocase SecF protein signature 241 256 1.0E-30 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMC99_RS03180 da23373016f7daac1b8ce0a3b9a3b061 325 PRINTS PR01755 Bacterial translocase SecF protein signature 40 55 1.0E-30 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMC99_RS03180 da23373016f7daac1b8ce0a3b9a3b061 325 PRINTS PR01755 Bacterial translocase SecF protein signature 161 175 1.0E-30 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMC99_RS03180 da23373016f7daac1b8ce0a3b9a3b061 325 PRINTS PR01755 Bacterial translocase SecF protein signature 209 227 1.0E-30 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMC99_RS03180 da23373016f7daac1b8ce0a3b9a3b061 325 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 41 293 1.4E-75 T 20-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMC99_RS11920 6add5759ba8ee76f634e91218c5eb3f1 220 PANTHER PTHR11749 2 217 4.3E-123 T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMC99_RS11920 6add5759ba8ee76f634e91218c5eb3f1 220 PIRSF PIRSF001461 1 219 7.3E-93 T 20-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMC99_RS11920 6add5759ba8ee76f634e91218c5eb3f1 220 SUPERFAMILY SSF51366 3 216 4.0E-78 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMC99_RS11920 6add5759ba8ee76f634e91218c5eb3f1 220 Gene3D G3DSA:3.20.20.70 2 217 8.1E-94 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS11920 6add5759ba8ee76f634e91218c5eb3f1 220 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 4.6E-91 T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMC99_RS11920 6add5759ba8ee76f634e91218c5eb3f1 220 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMC99_RS11920 6add5759ba8ee76f634e91218c5eb3f1 220 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 202 5.1E-85 T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMC99_RS11920 6add5759ba8ee76f634e91218c5eb3f1 220 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 135 157 - T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMC99_RS04590 f66d6b7104033970d3e707b660e99922 141 Gene3D G3DSA:3.10.129.10 29 141 1.4E-29 T 20-04-2016 IPR029069 HotDog domain AMC99_RS04590 f66d6b7104033970d3e707b660e99922 141 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 34 139 4.8E-10 T 20-04-2016 IPR003736 Phenylacetic acid degradation-related domain AMC99_RS04590 f66d6b7104033970d3e707b660e99922 141 PANTHER PTHR12418:SF30 48 141 8.6E-23 T 20-04-2016 AMC99_RS04590 f66d6b7104033970d3e707b660e99922 141 PANTHER PTHR12418 48 141 8.6E-23 T 20-04-2016 AMC99_RS04590 f66d6b7104033970d3e707b660e99922 141 SUPERFAMILY SSF54637 9 139 3.37E-22 T 20-04-2016 IPR029069 HotDog domain AMC99_RS04590 f66d6b7104033970d3e707b660e99922 141 Pfam PF03061 Thioesterase superfamily 57 127 4.5E-13 T 20-04-2016 IPR006683 Thioesterase domain AMC99_RS09310 8d9f9f029c78a111a97812fd7c792df3 552 Pfam PF07969 Amidohydrolase family 73 549 6.5E-101 T 20-04-2016 IPR013108 Amidohydrolase 3 AMC99_RS09310 8d9f9f029c78a111a97812fd7c792df3 552 SUPERFAMILY SSF51338 13 82 5.4E-11 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS09310 8d9f9f029c78a111a97812fd7c792df3 552 SUPERFAMILY SSF51338 508 551 5.4E-11 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS09310 8d9f9f029c78a111a97812fd7c792df3 552 Gene3D G3DSA:3.20.20.140 221 493 3.1E-32 T 20-04-2016 AMC99_RS09310 8d9f9f029c78a111a97812fd7c792df3 552 Gene3D G3DSA:3.20.20.140 84 104 3.1E-32 T 20-04-2016 AMC99_RS09310 8d9f9f029c78a111a97812fd7c792df3 552 SUPERFAMILY SSF51556 81 142 1.84E-37 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS09310 8d9f9f029c78a111a97812fd7c792df3 552 SUPERFAMILY SSF51556 219 508 1.84E-37 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS09310 8d9f9f029c78a111a97812fd7c792df3 552 PANTHER PTHR22642:SF2 75 552 4.8E-163 T 20-04-2016 AMC99_RS09310 8d9f9f029c78a111a97812fd7c792df3 552 Gene3D G3DSA:2.30.40.10 19 83 5.7E-13 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS09310 8d9f9f029c78a111a97812fd7c792df3 552 Gene3D G3DSA:2.30.40.10 521 550 5.7E-13 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS09310 8d9f9f029c78a111a97812fd7c792df3 552 PANTHER PTHR22642 75 552 4.8E-163 T 20-04-2016 AMC99_RS09310 8d9f9f029c78a111a97812fd7c792df3 552 Gene3D G3DSA:2.30.40.10 494 520 2.4E-4 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMC99_RS01440 f688374bc297d2ee40a0823f98e67eb8 220 PANTHER PTHR11961 1 179 1.2E-32 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMC99_RS01440 f688374bc297d2ee40a0823f98e67eb8 220 Pfam PF00034 Cytochrome c 71 166 9.1E-7 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS01440 f688374bc297d2ee40a0823f98e67eb8 220 Gene3D G3DSA:1.10.760.10 70 168 1.1E-32 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS01440 f688374bc297d2ee40a0823f98e67eb8 220 PANTHER PTHR11961:SF6 1 179 1.2E-32 T 20-04-2016 AMC99_RS01440 f688374bc297d2ee40a0823f98e67eb8 220 SUPERFAMILY SSF46626 71 168 1.89E-27 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS01440 f688374bc297d2ee40a0823f98e67eb8 220 PRINTS PR00604 Class IA and IB cytochrome C signature 143 153 1.1E-12 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMC99_RS01440 f688374bc297d2ee40a0823f98e67eb8 220 PRINTS PR00604 Class IA and IB cytochrome C signature 124 140 1.1E-12 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMC99_RS01440 f688374bc297d2ee40a0823f98e67eb8 220 PRINTS PR00604 Class IA and IB cytochrome C signature 93 108 1.1E-12 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMC99_RS01440 f688374bc297d2ee40a0823f98e67eb8 220 PRINTS PR00604 Class IA and IB cytochrome C signature 80 87 1.1E-12 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMC99_RS03510 c9549a2eb9935e155e1099448c0ad1e3 295 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 130 267 2.9E-6 T 20-04-2016 IPR019587 Polyketide cyclase/dehydrase AMC99_RS03510 c9549a2eb9935e155e1099448c0ad1e3 295 SUPERFAMILY SSF55961 130 292 1.38E-11 T 20-04-2016 AMC99_RS09990 7da099009ba10b650ffec92b0862a9bf 289 SUPERFAMILY SSF56281 14 280 1.16E-54 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS09990 7da099009ba10b650ffec92b0862a9bf 289 SMART SM00849 35 207 2.0E-27 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS09990 7da099009ba10b650ffec92b0862a9bf 289 Gene3D G3DSA:3.60.15.10 11 234 7.1E-50 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS09990 7da099009ba10b650ffec92b0862a9bf 289 Pfam PF00753 Metallo-beta-lactamase superfamily 35 207 1.0E-16 T 20-04-2016 IPR001279 Metallo-beta-lactamase AMC99_RS09990 7da099009ba10b650ffec92b0862a9bf 289 PANTHER PTHR23131 13 286 1.6E-62 T 20-04-2016 AMC99_RS09395 bda57eca327f40401c27ae6df455cd98 364 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 260 1.6E-67 T 20-04-2016 IPR017592 Pilus assembly, Flp-type CpaB AMC99_RS09395 bda57eca327f40401c27ae6df455cd98 364 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 116 228 4.0E-35 T 20-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain AMC99_RS09395 bda57eca327f40401c27ae6df455cd98 364 Pfam PF08666 SAF domain 46 107 2.1E-10 T 20-04-2016 IPR013974 SAF domain AMC99_RS09395 bda57eca327f40401c27ae6df455cd98 364 SMART SM00858 44 110 4.8E-9 T 20-04-2016 IPR013974 SAF domain AMC99_RS08390 2196ff407b4aeb68daf2c7641ade954d 436 PANTHER PTHR10110 79 434 8.3E-68 T 20-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 AMC99_RS08390 2196ff407b4aeb68daf2c7641ade954d 436 PANTHER PTHR10110 17 56 8.3E-68 T 20-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 AMC99_RS08390 2196ff407b4aeb68daf2c7641ade954d 436 Pfam PF00999 Sodium/hydrogen exchanger family 17 411 7.5E-56 T 20-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMC99_RS08390 2196ff407b4aeb68daf2c7641ade954d 436 PANTHER PTHR10110:SF86 79 434 8.3E-68 T 20-04-2016 AMC99_RS08390 2196ff407b4aeb68daf2c7641ade954d 436 PANTHER PTHR10110:SF86 17 56 8.3E-68 T 20-04-2016 AMC99_RS10460 144b918d549bb4e1b49c3acbd61678ee 328 Pfam PF01872 RibD C-terminal domain 151 296 4.1E-30 T 20-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMC99_RS10460 144b918d549bb4e1b49c3acbd61678ee 328 Gene3D G3DSA:3.40.430.10 244 325 1.9E-13 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain AMC99_RS10460 144b918d549bb4e1b49c3acbd61678ee 328 Gene3D G3DSA:3.40.430.10 124 228 2.8E-33 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain AMC99_RS10460 144b918d549bb4e1b49c3acbd61678ee 328 PANTHER PTHR11079 5 212 9.5E-47 T 20-04-2016 AMC99_RS10460 144b918d549bb4e1b49c3acbd61678ee 328 Gene3D G3DSA:3.40.140.10 6 123 5.7E-25 T 20-04-2016 AMC99_RS10460 144b918d549bb4e1b49c3acbd61678ee 328 PANTHER PTHR11079:SF10 5 212 9.5E-47 T 20-04-2016 AMC99_RS10460 144b918d549bb4e1b49c3acbd61678ee 328 SUPERFAMILY SSF53597 149 317 1.7E-40 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain AMC99_RS10460 144b918d549bb4e1b49c3acbd61678ee 328 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 104 1.2E-15 T 20-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AMC99_RS10460 144b918d549bb4e1b49c3acbd61678ee 328 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 228 1.9E-71 T 20-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 AMC99_RS10460 144b918d549bb4e1b49c3acbd61678ee 328 SUPERFAMILY SSF53927 7 129 1.62E-35 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMC99_RS05185 3bd82bdde5036351e3e05dfa38cc1a89 243 Pfam PF00588 SpoU rRNA Methylase family 7 154 9.8E-28 T 20-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMC99_RS05185 3bd82bdde5036351e3e05dfa38cc1a89 243 SUPERFAMILY SSF75217 5 172 2.22E-32 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases AMC99_RS05185 3bd82bdde5036351e3e05dfa38cc1a89 243 PANTHER PTHR12029 8 181 6.1E-21 T 20-04-2016 AMC99_RS05185 3bd82bdde5036351e3e05dfa38cc1a89 243 Gene3D G3DSA:3.40.1280.10 5 161 5.3E-30 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMC99_RS05185 3bd82bdde5036351e3e05dfa38cc1a89 243 PIRSF PIRSF004808 2 240 3.5E-70 T 20-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AMC99_RS05185 3bd82bdde5036351e3e05dfa38cc1a89 243 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 8 235 1.2E-52 T 20-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AMC99_RS05185 3bd82bdde5036351e3e05dfa38cc1a89 243 PANTHER PTHR12029:SF54 8 181 6.1E-21 T 20-04-2016 AMC99_RS12995 836d1d34aeadf9400e58a26374861b90 191 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 22 191 6.1E-60 T 20-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AMC99_RS12995 836d1d34aeadf9400e58a26374861b90 191 PANTHER PTHR10134:SF1 23 191 1.9E-64 T 20-04-2016 AMC99_RS12995 836d1d34aeadf9400e58a26374861b90 191 PANTHER PTHR10134 23 191 1.9E-64 T 20-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 AMC99_RS12995 836d1d34aeadf9400e58a26374861b90 191 PRINTS PR00162 Rieske 2Fe-2S subunit signature 124 135 3.4E-15 T 20-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMC99_RS12995 836d1d34aeadf9400e58a26374861b90 191 PRINTS PR00162 Rieske 2Fe-2S subunit signature 151 163 3.4E-15 T 20-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMC99_RS12995 836d1d34aeadf9400e58a26374861b90 191 PRINTS PR00162 Rieske 2Fe-2S subunit signature 163 175 3.4E-15 T 20-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMC99_RS12995 836d1d34aeadf9400e58a26374861b90 191 SUPERFAMILY SSF50022 44 188 6.55E-36 T 20-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMC99_RS12995 836d1d34aeadf9400e58a26374861b90 191 Gene3D G3DSA:1.20.5.510 15 53 2.9E-11 T 20-04-2016 AMC99_RS12995 836d1d34aeadf9400e58a26374861b90 191 Gene3D G3DSA:2.102.10.10 61 189 1.6E-31 T 20-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMC99_RS12995 836d1d34aeadf9400e58a26374861b90 191 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 14 53 8.1E-13 T 20-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AMC99_RS12995 836d1d34aeadf9400e58a26374861b90 191 Pfam PF00355 Rieske [2Fe-2S] domain 100 177 8.9E-11 T 20-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMC99_RS02855 e37e59672bce4709406f92df28faa7f4 271 PANTHER PTHR39456 1 270 2.1E-40 T 20-04-2016 AMC99_RS02855 e37e59672bce4709406f92df28faa7f4 271 Pfam PF10118 Predicted metal-dependent hydrolase 3 251 1.8E-63 T 20-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 AMC99_RS02855 e37e59672bce4709406f92df28faa7f4 271 PIRSF PIRSF007580 1 269 3.2E-53 T 20-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 AMC99_RS02855 e37e59672bce4709406f92df28faa7f4 271 PANTHER PTHR39456:SF2 1 270 2.1E-40 T 20-04-2016 AMC99_RS01930 44ee918ba78a67de0313796d67068d34 318 PANTHER PTHR11783:SF15 26 152 1.8E-45 T 20-04-2016 AMC99_RS01930 44ee918ba78a67de0313796d67068d34 318 PANTHER PTHR11783:SF15 184 300 1.8E-45 T 20-04-2016 AMC99_RS01930 44ee918ba78a67de0313796d67068d34 318 PANTHER PTHR11783 26 152 1.8E-45 T 20-04-2016 AMC99_RS01930 44ee918ba78a67de0313796d67068d34 318 PANTHER PTHR11783 184 300 1.8E-45 T 20-04-2016 AMC99_RS01930 44ee918ba78a67de0313796d67068d34 318 Gene3D G3DSA:3.40.50.300 24 298 6.7E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS01930 44ee918ba78a67de0313796d67068d34 318 SUPERFAMILY SSF52540 23 296 5.31E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS01930 44ee918ba78a67de0313796d67068d34 318 Pfam PF00685 Sulfotransferase domain 33 291 7.6E-34 T 20-04-2016 IPR000863 Sulfotransferase domain GO:0008146 AMC99_RS01105 78abdcf6469607721db61af43dafe522 155 Pfam PF07883 Cupin domain 46 117 2.8E-17 T 20-04-2016 IPR013096 Cupin 2, conserved barrel AMC99_RS01105 78abdcf6469607721db61af43dafe522 155 PANTHER PTHR10245:SF48 16 139 1.0E-31 T 20-04-2016 AMC99_RS01105 78abdcf6469607721db61af43dafe522 155 Gene3D G3DSA:2.60.120.10 31 125 3.5E-22 T 20-04-2016 IPR014710 RmlC-like jelly roll fold AMC99_RS01105 78abdcf6469607721db61af43dafe522 155 PANTHER PTHR10245 16 139 1.0E-31 T 20-04-2016 AMC99_RS01105 78abdcf6469607721db61af43dafe522 155 SUPERFAMILY SSF51182 22 151 2.32E-23 T 20-04-2016 IPR011051 RmlC-like cupin domain AMC99_RS08655 706868eb62df52e300105789657e4fc8 106 Gene3D G3DSA:1.10.10.10 8 40 0.001 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS10140 f3746e75ecc09249c379fa495fbfb890 652 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 162 1.0E-5 T 20-04-2016 AMC99_RS10140 f3746e75ecc09249c379fa495fbfb890 652 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 310 328 1.0E-5 T 20-04-2016 AMC99_RS10140 f3746e75ecc09249c379fa495fbfb890 652 PANTHER PTHR23023:SF132 139 635 5.5E-135 T 20-04-2016 AMC99_RS10140 f3746e75ecc09249c379fa495fbfb890 652 Gene3D G3DSA:3.50.50.60 139 357 1.3E-55 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS10140 f3746e75ecc09249c379fa495fbfb890 652 Gene3D G3DSA:3.50.50.60 428 637 8.5E-17 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS10140 f3746e75ecc09249c379fa495fbfb890 652 Pfam PF00743 Flavin-binding monooxygenase-like 141 344 1.6E-15 T 20-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMC99_RS10140 f3746e75ecc09249c379fa495fbfb890 652 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 164 5.5E-7 T 20-04-2016 AMC99_RS10140 f3746e75ecc09249c379fa495fbfb890 652 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 335 5.5E-7 T 20-04-2016 AMC99_RS10140 f3746e75ecc09249c379fa495fbfb890 652 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 535 550 5.5E-7 T 20-04-2016 AMC99_RS10140 f3746e75ecc09249c379fa495fbfb890 652 SUPERFAMILY SSF51905 445 548 1.15E-49 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS10140 f3746e75ecc09249c379fa495fbfb890 652 SUPERFAMILY SSF51905 142 366 1.15E-49 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS10140 f3746e75ecc09249c379fa495fbfb890 652 PANTHER PTHR23023 139 635 5.5E-135 T 20-04-2016 AMC99_RS12930 51a22e2213c37bad5d83d7ce280caa29 355 SUPERFAMILY SSF56059 102 298 3.54E-56 T 20-04-2016 AMC99_RS12930 51a22e2213c37bad5d83d7ce280caa29 355 Gene3D G3DSA:3.30.470.20 154 352 6.3E-73 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMC99_RS12930 51a22e2213c37bad5d83d7ce280caa29 355 Gene3D G3DSA:3.30.1490.20 118 153 2.1E-7 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMC99_RS12930 51a22e2213c37bad5d83d7ce280caa29 355 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 7 350 1.5E-100 T 20-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AMC99_RS12930 51a22e2213c37bad5d83d7ce280caa29 355 PANTHER PTHR11609 1 351 4.5E-109 T 20-04-2016 AMC99_RS12930 51a22e2213c37bad5d83d7ce280caa29 355 Pfam PF02222 ATP-grasp domain 118 278 3.6E-44 T 20-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 AMC99_RS12930 51a22e2213c37bad5d83d7ce280caa29 355 SUPERFAMILY SSF52440 4 98 2.88E-22 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS12930 51a22e2213c37bad5d83d7ce280caa29 355 PANTHER PTHR11609:SF5 1 351 4.5E-109 T 20-04-2016 AMC99_RS12930 51a22e2213c37bad5d83d7ce280caa29 355 Gene3D G3DSA:3.40.50.20 3 110 1.1E-28 T 20-04-2016 IPR016185 Pre-ATP-grasp domain AMC99_RS12930 51a22e2213c37bad5d83d7ce280caa29 355 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 7 354 38.585 T 20-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AMC99_RS12930 51a22e2213c37bad5d83d7ce280caa29 355 SUPERFAMILY SSF51246 304 352 3.14E-12 T 20-04-2016 IPR011054 Rudiment single hybrid motif AMC99_RS10765 e9f2b0c9cdcee4c8b056745bf9cd88af 516 PANTHER PTHR20992:SF9 35 363 2.3E-50 T 20-04-2016 AMC99_RS10765 e9f2b0c9cdcee4c8b056745bf9cd88af 516 PANTHER PTHR20992 35 363 2.3E-50 T 20-04-2016 AMC99_RS10765 e9f2b0c9cdcee4c8b056745bf9cd88af 516 TIGRFAM TIGR00341 TIGR00341: TIGR00341 family protein 41 249 2.0E-28 T 20-04-2016 AMC99_RS10765 e9f2b0c9cdcee4c8b056745bf9cd88af 516 Pfam PF04087 Domain of unknown function (DUF389) 81 215 1.2E-38 T 20-04-2016 IPR005240 Protein of unknown function DUF389 AMC99_RS05995 9222aca0aed598a5ef4c220bf92186e4 229 Gene3D G3DSA:2.10.109.10 107 228 2.3E-35 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMC99_RS05995 9222aca0aed598a5ef4c220bf92186e4 229 PANTHER PTHR33516 99 229 1.0E-69 T 20-04-2016 AMC99_RS05995 9222aca0aed598a5ef4c220bf92186e4 229 PANTHER PTHR33516 1 74 1.0E-69 T 20-04-2016 AMC99_RS05995 9222aca0aed598a5ef4c220bf92186e4 229 SUPERFAMILY SSF51306 105 226 3.31E-30 T 20-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AMC99_RS05995 9222aca0aed598a5ef4c220bf92186e4 229 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 152 163 3.3E-7 T 20-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMC99_RS05995 9222aca0aed598a5ef4c220bf92186e4 229 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 141 151 3.3E-7 T 20-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMC99_RS05995 9222aca0aed598a5ef4c220bf92186e4 229 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 181 193 3.3E-7 T 20-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMC99_RS05995 9222aca0aed598a5ef4c220bf92186e4 229 Pfam PF01726 LexA DNA binding domain 2 63 9.3E-16 T 20-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AMC99_RS05995 9222aca0aed598a5ef4c220bf92186e4 229 Hamap MF_00015 LexA repressor [lexA]. 1 228 33.235 T 20-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMC99_RS05995 9222aca0aed598a5ef4c220bf92186e4 229 Pfam PF00717 Peptidase S24-like 144 210 3.9E-14 T 20-04-2016 IPR019759 Peptidase S24/S26A/S26B AMC99_RS05995 9222aca0aed598a5ef4c220bf92186e4 229 PANTHER PTHR33516:SF2 99 229 1.0E-69 T 20-04-2016 AMC99_RS05995 9222aca0aed598a5ef4c220bf92186e4 229 PANTHER PTHR33516:SF2 1 74 1.0E-69 T 20-04-2016 AMC99_RS05995 9222aca0aed598a5ef4c220bf92186e4 229 SUPERFAMILY SSF46785 2 68 8.13E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS05995 9222aca0aed598a5ef4c220bf92186e4 229 Gene3D G3DSA:1.10.10.10 2 67 2.9E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS05995 9222aca0aed598a5ef4c220bf92186e4 229 TIGRFAM TIGR00498 lexA: repressor LexA 2 228 3.9E-51 T 20-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMC99_RS07005 7221c0c51d80c126e50b8fdbcebf5ab1 1078 Pfam PF11739 Dicarboxylate transport 820 1024 4.8E-40 T 20-04-2016 IPR021730 Dicarboxylate transport AMC99_RS05170 54598b47c0c178bce9ff406b5b7deaa3 345 SUPERFAMILY SSF52540 75 298 1.01E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11885 c202de3f665c64572f3041f84645869f 265 PANTHER PTHR11941 2 262 2.0E-85 T 20-04-2016 AMC99_RS11885 c202de3f665c64572f3041f84645869f 265 Gene3D G3DSA:3.90.226.10 4 263 1.6E-85 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS11885 c202de3f665c64572f3041f84645869f 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 264 2.6E-55 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMC99_RS11885 c202de3f665c64572f3041f84645869f 265 SUPERFAMILY SSF52096 3 264 1.99E-84 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS03665 2d82373e7bece809fa30432b280946fd 282 PANTHER PTHR24322 146 177 2.9E-46 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS03665 2d82373e7bece809fa30432b280946fd 282 PANTHER PTHR24322 7 130 2.9E-46 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS03665 2d82373e7bece809fa30432b280946fd 282 SUPERFAMILY SSF51735 3 249 8.83E-73 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS03665 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.2E-36 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS03665 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.2E-36 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS03665 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.2E-36 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS03665 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.2E-36 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS03665 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.2E-36 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS03665 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.2E-36 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS03665 2d82373e7bece809fa30432b280946fd 282 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 247 2.1E-59 T 20-04-2016 AMC99_RS03665 2d82373e7bece809fa30432b280946fd 282 Gene3D G3DSA:3.40.50.720 3 249 1.5E-72 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS03665 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 9.2E-11 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS03665 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 9.2E-11 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS03665 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 9.2E-11 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS06710 c013229de1a4953a410358a0eeb50cef 564 SUPERFAMILY SSF53474 229 486 2.96E-23 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS06710 c013229de1a4953a410358a0eeb50cef 564 Pfam PF00561 alpha/beta hydrolase fold 246 486 2.4E-9 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS06710 c013229de1a4953a410358a0eeb50cef 564 Gene3D G3DSA:3.40.50.1820 162 534 2.2E-39 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS06710 c013229de1a4953a410358a0eeb50cef 564 PANTHER PTHR36837:SF2 3 563 5.3E-177 T 20-04-2016 AMC99_RS06710 c013229de1a4953a410358a0eeb50cef 564 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 73 241 2.4E-57 T 20-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- AMC99_RS06710 c013229de1a4953a410358a0eeb50cef 564 PANTHER PTHR36837 3 563 5.3E-177 T 20-04-2016 AMC99_RS00585 acd620f65ee8460bc9fedaeeb6e8a0f1 156 Pfam PF00920 Dehydratase family 1 143 1.7E-26 T 20-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS00585 acd620f65ee8460bc9fedaeeb6e8a0f1 156 SUPERFAMILY SSF52016 2 144 2.12E-32 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMC99_RS00585 acd620f65ee8460bc9fedaeeb6e8a0f1 156 PANTHER PTHR21000 6 139 9.0E-57 T 20-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMC99_RS00585 acd620f65ee8460bc9fedaeeb6e8a0f1 156 PANTHER PTHR21000:SF1 6 139 9.0E-57 T 20-04-2016 AMC99_RS01215 3a853f4c47060124823760b3e9d6266d 342 PANTHER PTHR26402 3 116 8.4E-23 T 20-04-2016 AMC99_RS01215 3a853f4c47060124823760b3e9d6266d 342 PANTHER PTHR26402 274 282 8.4E-23 T 20-04-2016 AMC99_RS01215 3a853f4c47060124823760b3e9d6266d 342 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 101 7.0E-18 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS01215 3a853f4c47060124823760b3e9d6266d 342 Gene3D G3DSA:1.10.10.10 4 104 1.4E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS01215 3a853f4c47060124823760b3e9d6266d 342 SMART SM00862 26 101 6.8E-15 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_RS01215 3a853f4c47060124823760b3e9d6266d 342 SUPERFAMILY SSF46894 4 103 1.67E-20 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_RS01215 3a853f4c47060124823760b3e9d6266d 342 PANTHER PTHR26402:SF514 3 116 8.4E-23 T 20-04-2016 AMC99_RS01215 3a853f4c47060124823760b3e9d6266d 342 PANTHER PTHR26402:SF514 274 282 8.4E-23 T 20-04-2016 AMC99_RS09910 d72551d9dd030af25dc7406c253724b9 138 PIRSF PIRSF004681 1 138 2.4E-53 T 20-04-2016 IPR001602 Uncharacterised protein family UPF0047 AMC99_RS09910 d72551d9dd030af25dc7406c253724b9 138 PANTHER PTHR30615 1 138 4.3E-61 T 20-04-2016 AMC99_RS09910 d72551d9dd030af25dc7406c253724b9 138 Gene3D G3DSA:2.60.120.460 1 138 6.3E-57 T 20-04-2016 IPR001602 Uncharacterised protein family UPF0047 AMC99_RS09910 d72551d9dd030af25dc7406c253724b9 138 Pfam PF01894 Uncharacterised protein family UPF0047 19 134 1.3E-40 T 20-04-2016 IPR001602 Uncharacterised protein family UPF0047 AMC99_RS09910 d72551d9dd030af25dc7406c253724b9 138 SUPERFAMILY SSF111038 1 138 5.23E-51 T 20-04-2016 IPR001602 Uncharacterised protein family UPF0047 AMC99_RS09910 d72551d9dd030af25dc7406c253724b9 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 6 138 9.1E-46 T 20-04-2016 IPR001602 Uncharacterised protein family UPF0047 AMC99_RS10515 95de3c20f78b40746d819e64cd3f0ce1 375 PANTHER PTHR30386:SF0 21 375 1.4E-83 T 20-04-2016 AMC99_RS10515 95de3c20f78b40746d819e64cd3f0ce1 375 SUPERFAMILY SSF111369 192 282 5.75E-10 T 20-04-2016 AMC99_RS10515 95de3c20f78b40746d819e64cd3f0ce1 375 SUPERFAMILY SSF111369 61 140 1.03E-6 T 20-04-2016 AMC99_RS10515 95de3c20f78b40746d819e64cd3f0ce1 375 Pfam PF13437 HlyD family secretion protein 232 350 7.5E-17 T 20-04-2016 AMC99_RS10515 95de3c20f78b40746d819e64cd3f0ce1 375 PANTHER PTHR30386 21 375 1.4E-83 T 20-04-2016 AMC99_RS10515 95de3c20f78b40746d819e64cd3f0ce1 375 Gene3D G3DSA:2.40.50.100 229 262 2.7E-14 T 20-04-2016 AMC99_RS10515 95de3c20f78b40746d819e64cd3f0ce1 375 Gene3D G3DSA:2.40.50.100 65 98 2.7E-14 T 20-04-2016 AMC99_RS10515 95de3c20f78b40746d819e64cd3f0ce1 375 Pfam PF13533 Biotin-lipoyl like 65 113 4.8E-9 T 20-04-2016 AMC99_RS10610 11159fc4e3ca46f92b3ea7dc4046a251 511 PANTHER PTHR18919:SF94 3 412 4.2E-40 T 20-04-2016 AMC99_RS10610 11159fc4e3ca46f92b3ea7dc4046a251 511 PANTHER PTHR18919 3 412 4.2E-40 T 20-04-2016 AMC99_RS10610 11159fc4e3ca46f92b3ea7dc4046a251 511 SUPERFAMILY SSF53901 296 407 2.63E-13 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMC99_RS10160 db34f3ab04e20cdec262b887cd4deb80 760 PANTHER PTHR32552 5 618 3.5E-66 T 20-04-2016 AMC99_RS10160 db34f3ab04e20cdec262b887cd4deb80 760 PANTHER PTHR32552 641 760 3.5E-66 T 20-04-2016 AMC99_RS10160 db34f3ab04e20cdec262b887cd4deb80 760 PANTHER PTHR32552:SF33 5 618 3.5E-66 T 20-04-2016 AMC99_RS10160 db34f3ab04e20cdec262b887cd4deb80 760 PANTHER PTHR32552:SF33 641 760 3.5E-66 T 20-04-2016 AMC99_RS10160 db34f3ab04e20cdec262b887cd4deb80 760 Gene3D G3DSA:2.40.170.20 169 760 2.3E-83 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS10160 db34f3ab04e20cdec262b887cd4deb80 760 SUPERFAMILY SSF56935 30 760 8.63E-117 T 20-04-2016 AMC99_RS10160 db34f3ab04e20cdec262b887cd4deb80 760 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 159 4.8E-13 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS10160 db34f3ab04e20cdec262b887cd4deb80 760 Gene3D G3DSA:2.170.130.10 32 168 1.6E-27 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS10160 db34f3ab04e20cdec262b887cd4deb80 760 Pfam PF00593 TonB dependent receptor 490 757 1.3E-20 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS09140 0bd832192a302d3fd47eb52a640f11fc 573 PANTHER PTHR30627 16 558 2.1E-112 T 20-04-2016 AMC99_RS09140 0bd832192a302d3fd47eb52a640f11fc 573 SUPERFAMILY SSF56519 69 204 5.89E-26 T 20-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMC99_RS09140 0bd832192a302d3fd47eb52a640f11fc 573 Pfam PF00905 Penicillin binding protein transpeptidase domain 243 521 2.2E-52 T 20-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMC99_RS09140 0bd832192a302d3fd47eb52a640f11fc 573 Gene3D G3DSA:3.90.1310.10 148 204 6.9E-9 T 20-04-2016 AMC99_RS09140 0bd832192a302d3fd47eb52a640f11fc 573 PANTHER PTHR30627:SF1 16 558 2.1E-112 T 20-04-2016 AMC99_RS09140 0bd832192a302d3fd47eb52a640f11fc 573 SUPERFAMILY SSF56601 216 554 2.05E-76 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS09140 0bd832192a302d3fd47eb52a640f11fc 573 Pfam PF03717 Penicillin-binding Protein dimerisation domain 71 188 3.2E-11 T 20-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMC99_RS09140 0bd832192a302d3fd47eb52a640f11fc 573 Gene3D G3DSA:3.40.710.10 216 541 9.3E-73 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS02280 2d1b9f2fefadb35cfdff039bf21ef09c 392 Pfam PF04909 Amidohydrolase 84 375 2.0E-21 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMC99_RS02280 2d1b9f2fefadb35cfdff039bf21ef09c 392 PANTHER PTHR21240 124 388 2.1E-18 T 20-04-2016 AMC99_RS02280 2d1b9f2fefadb35cfdff039bf21ef09c 392 SUPERFAMILY SSF51556 11 36 2.61E-47 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS02280 2d1b9f2fefadb35cfdff039bf21ef09c 392 SUPERFAMILY SSF51556 77 375 2.61E-47 T 20-04-2016 IPR032466 Metal-dependent hydrolase AMC99_RS02280 2d1b9f2fefadb35cfdff039bf21ef09c 392 Gene3D G3DSA:3.20.20.140 53 387 1.2E-40 T 20-04-2016 AMC99_RS11740 a29f722388230b67ad1cf7d269e970f8 242 Pfam PF01925 Sulfite exporter TauE/SafE 11 235 8.0E-21 T 20-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMC99_RS05635 7d66d5840a8635336b71d77abb2b8e5e 772 Pfam PF01734 Patatin-like phospholipase 10 332 1.4E-14 T 20-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 AMC99_RS05635 7d66d5840a8635336b71d77abb2b8e5e 772 SUPERFAMILY SSF52151 317 451 9.94E-27 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMC99_RS05635 7d66d5840a8635336b71d77abb2b8e5e 772 SUPERFAMILY SSF52151 167 227 9.94E-27 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMC99_RS05635 7d66d5840a8635336b71d77abb2b8e5e 772 SUPERFAMILY SSF52151 255 285 9.94E-27 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMC99_RS05635 7d66d5840a8635336b71d77abb2b8e5e 772 SUPERFAMILY SSF52151 5 38 9.94E-27 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMC99_RS05635 7d66d5840a8635336b71d77abb2b8e5e 772 SUPERFAMILY SSF52151 67 118 9.94E-27 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMC99_RS05635 7d66d5840a8635336b71d77abb2b8e5e 772 TIGRFAM TIGR03607 TIGR03607: patatin-related protein 5 726 5.1E-205 T 20-04-2016 IPR019894 Patatin-related protein AMC99_RS05635 7d66d5840a8635336b71d77abb2b8e5e 772 Pfam PF11856 Protein of unknown function (DUF3376) 570 748 2.2E-24 T 20-04-2016 IPR024282 Domain of unknown function DUF3376 AMC99_RS10965 7b7f7a453a78d52b3f1636e9fb167602 124 PANTHER PTHR35006 1 121 8.4E-55 T 20-04-2016 AMC99_RS10965 7b7f7a453a78d52b3f1636e9fb167602 124 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 116 1.0E-6 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_RS10965 7b7f7a453a78d52b3f1636e9fb167602 124 PANTHER PTHR35006:SF1 1 121 8.4E-55 T 20-04-2016 AMC99_RS10965 7b7f7a453a78d52b3f1636e9fb167602 124 SUPERFAMILY SSF54593 3 123 8.94E-21 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS10965 7b7f7a453a78d52b3f1636e9fb167602 124 Gene3D G3DSA:3.10.180.10 3 120 8.9E-18 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS11645 dca72c87fbb7a24f9e63e15c0a575645 467 PANTHER PTHR30576 5 467 1.7E-80 T 20-04-2016 AMC99_RS11645 dca72c87fbb7a24f9e63e15c0a575645 467 Pfam PF02397 Bacterial sugar transferase 274 460 1.1E-52 T 20-04-2016 IPR003362 Bacterial sugar transferase AMC99_RS10045 04744d9212f9ae888e9ccbc38c19c181 201 SUPERFAMILY SSF53335 21 173 9.79E-18 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10045 04744d9212f9ae888e9ccbc38c19c181 201 Gene3D G3DSA:3.40.50.150 33 166 3.4E-10 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10045 04744d9212f9ae888e9ccbc38c19c181 201 Pfam PF13649 Methyltransferase domain 59 158 3.0E-6 T 20-04-2016 AMC99_RS00840 0e089fe08e540b804ac34035cc7a6f6f 402 Pfam PF14907 Uncharacterised nucleotidyltransferase 30 278 2.4E-43 T 20-04-2016 AMC99_RS01880 027c72c266d2c7ef7ed8526264cf3b86 612 Pfam PF05960 Bacterial protein of unknown function (DUF885) 64 602 1.2E-157 T 20-04-2016 IPR010281 Protein of unknown function DUF885 AMC99_RS01880 027c72c266d2c7ef7ed8526264cf3b86 612 PANTHER PTHR33361:SF4 1 610 1.2E-170 T 20-04-2016 AMC99_RS01880 027c72c266d2c7ef7ed8526264cf3b86 612 PANTHER PTHR33361 1 610 1.2E-170 T 20-04-2016 AMC99_RS13590 46e0cbcc33f3047f5abf7a0735bfaa29 235 PANTHER PTHR13707 1 233 1.0E-128 T 20-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AMC99_RS13590 46e0cbcc33f3047f5abf7a0735bfaa29 235 SUPERFAMILY SSF100950 3 230 2.51E-82 T 20-04-2016 AMC99_RS13590 46e0cbcc33f3047f5abf7a0735bfaa29 235 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 215 4.6E-68 T 20-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 AMC99_RS13590 46e0cbcc33f3047f5abf7a0735bfaa29 235 SMART SM00882 5 217 1.0E-84 T 20-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AMC99_RS13590 46e0cbcc33f3047f5abf7a0735bfaa29 235 Gene3D G3DSA:3.40.1080.10 3 216 4.1E-94 T 20-04-2016 AMC99_RS13590 46e0cbcc33f3047f5abf7a0735bfaa29 235 Pfam PF01144 Coenzyme A transferase 8 216 1.1E-74 T 20-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AMC99_RS08260 457a572c333bbf43ce47cbd613763fc6 99 Pfam PF06667 Phage shock protein B 6 68 1.1E-18 T 20-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AMC99_RS08260 457a572c333bbf43ce47cbd613763fc6 99 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 6 70 4.0E-26 T 20-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AMC99_RS12900 00947f27d4e535e360550278b9fa9acc 136 Pfam PF11233 Protein of unknown function (DUF3035) 16 126 8.8E-18 T 20-04-2016 IPR021395 Protein of unknown function DUF3035 AMC99_RS12110 587bccd6a5490be47f0d142508462c83 127 Gene3D G3DSA:1.10.760.10 5 118 5.4E-6 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS12110 587bccd6a5490be47f0d142508462c83 127 SUPERFAMILY SSF46626 1 119 1.68E-9 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMC99_RS03710 246cfd1a867fb0e146d3ad462f735388 144 Gene3D G3DSA:3.40.30.10 42 142 3.3E-31 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS03710 246cfd1a867fb0e146d3ad462f735388 144 ProSitePatterns PS00194 Thioredoxin family active site. 59 77 - T 20-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 AMC99_RS03710 246cfd1a867fb0e146d3ad462f735388 144 PANTHER PTHR10438:SF281 19 142 4.3E-34 T 20-04-2016 AMC99_RS03710 246cfd1a867fb0e146d3ad462f735388 144 PRINTS PR00421 Thioredoxin family signature 106 117 2.8E-8 T 20-04-2016 AMC99_RS03710 246cfd1a867fb0e146d3ad462f735388 144 PRINTS PR00421 Thioredoxin family signature 58 66 2.8E-8 T 20-04-2016 AMC99_RS03710 246cfd1a867fb0e146d3ad462f735388 144 PRINTS PR00421 Thioredoxin family signature 66 75 2.8E-8 T 20-04-2016 AMC99_RS03710 246cfd1a867fb0e146d3ad462f735388 144 SUPERFAMILY SSF52833 27 143 7.58E-34 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS03710 246cfd1a867fb0e146d3ad462f735388 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 141 2.9E-30 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMC99_RS03710 246cfd1a867fb0e146d3ad462f735388 144 PANTHER PTHR10438 19 142 4.3E-34 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMC99_RS03710 246cfd1a867fb0e146d3ad462f735388 144 Pfam PF00085 Thioredoxin 44 139 6.4E-27 T 20-04-2016 IPR013766 Thioredoxin domain GO:0045454 AMC99_RS07295 a5d270d018d404d41af6f6cd5d429e06 517 SUPERFAMILY SSF56925 85 215 1.02E-9 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMC99_RS07295 a5d270d018d404d41af6f6cd5d429e06 517 SUPERFAMILY SSF56925 348 499 6.98E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMC99_RS07295 a5d270d018d404d41af6f6cd5d429e06 517 Pfam PF01298 Transferrin binding protein-like solute binding protein 348 516 2.7E-7 T 20-04-2016 IPR001677 Solute-binding protein, transferrin-binding protein-like GO:0016020 AMC99_RS07630 1fed4037ee33852b78d63e805e2f6c9a 489 Pfam PF00263 Bacterial type II and III secretion system protein 260 431 3.3E-45 T 20-04-2016 IPR004846 Type II/III secretion system GO:0009306 AMC99_RS07630 1fed4037ee33852b78d63e805e2f6c9a 489 Pfam PF13629 Pilus formation protein N terminal region 38 107 1.8E-19 T 20-04-2016 IPR032789 Pilus formation protein, N-terminal AMC99_RS07630 1fed4037ee33852b78d63e805e2f6c9a 489 Pfam PF04972 BON domain 123 168 2.3E-6 T 20-04-2016 IPR007055 BON domain AMC99_RS07630 1fed4037ee33852b78d63e805e2f6c9a 489 PRINTS PR00811 Bacterial general secretion pathway protein D signature 255 279 5.4E-15 T 20-04-2016 IPR001775 GspD/PilQ family AMC99_RS07630 1fed4037ee33852b78d63e805e2f6c9a 489 PRINTS PR00811 Bacterial general secretion pathway protein D signature 174 184 5.4E-15 T 20-04-2016 IPR001775 GspD/PilQ family AMC99_RS07630 1fed4037ee33852b78d63e805e2f6c9a 489 PRINTS PR00811 Bacterial general secretion pathway protein D signature 395 413 5.4E-15 T 20-04-2016 IPR001775 GspD/PilQ family AMC99_RS07630 1fed4037ee33852b78d63e805e2f6c9a 489 PRINTS PR00811 Bacterial general secretion pathway protein D signature 418 432 5.4E-15 T 20-04-2016 IPR001775 GspD/PilQ family AMC99_RS07630 1fed4037ee33852b78d63e805e2f6c9a 489 PANTHER PTHR30332:SF1 163 456 5.3E-73 T 20-04-2016 AMC99_RS07630 1fed4037ee33852b78d63e805e2f6c9a 489 PANTHER PTHR30332 163 456 5.3E-73 T 20-04-2016 AMC99_RS03565 af7214cdc30c2125b90e27e91f3c7008 143 PANTHER PTHR38477:SF1 1 140 1.4E-30 T 20-04-2016 AMC99_RS03565 af7214cdc30c2125b90e27e91f3c7008 143 PANTHER PTHR38477 1 140 1.4E-30 T 20-04-2016 AMC99_RS03565 af7214cdc30c2125b90e27e91f3c7008 143 Pfam PF13645 L,D-transpeptidase catalytic domain 2 141 2.3E-42 T 20-04-2016 IPR032676 Putative L,D-transpeptidase catalytic domain AMC99_RS13230 016dff41182a651d61d248df7049d9cb 529 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 251 265 - T 20-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 AMC99_RS13230 016dff41182a651d61d248df7049d9cb 529 Pfam PF00732 GMC oxidoreductase 4 292 3.1E-84 T 20-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 AMC99_RS13230 016dff41182a651d61d248df7049d9cb 529 PIRSF PIRSF000137 1 529 3.2E-139 T 20-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 AMC99_RS13230 016dff41182a651d61d248df7049d9cb 529 SUPERFAMILY SSF54373 288 469 1.28E-53 T 20-04-2016 AMC99_RS13230 016dff41182a651d61d248df7049d9cb 529 SUPERFAMILY SSF51905 3 285 7.63E-84 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS13230 016dff41182a651d61d248df7049d9cb 529 SUPERFAMILY SSF51905 468 526 7.63E-84 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS13230 016dff41182a651d61d248df7049d9cb 529 Gene3D G3DSA:3.50.50.60 2 123 9.6E-111 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS13230 016dff41182a651d61d248df7049d9cb 529 Gene3D G3DSA:3.50.50.60 462 526 9.6E-111 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS13230 016dff41182a651d61d248df7049d9cb 529 Gene3D G3DSA:3.50.50.60 184 310 9.6E-111 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS13230 016dff41182a651d61d248df7049d9cb 529 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 79 102 - T 20-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 AMC99_RS13230 016dff41182a651d61d248df7049d9cb 529 Pfam PF05199 GMC oxidoreductase 384 519 1.7E-39 T 20-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 AMC99_RS13230 016dff41182a651d61d248df7049d9cb 529 PANTHER PTHR11552 1 527 1.1E-188 T 20-04-2016 AMC99_RS02770 25ca677b4be4615f4b532951cee73624 191 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 190 37.053 T 20-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AMC99_RS02770 25ca677b4be4615f4b532951cee73624 191 Gene3D G3DSA:2.60.370.10 64 188 2.3E-51 T 20-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain AMC99_RS02770 25ca677b4be4615f4b532951cee73624 191 PIRSF PIRSF005413 1 191 2.2E-69 T 20-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AMC99_RS02770 25ca677b4be4615f4b532951cee73624 191 PANTHER PTHR21320 8 187 3.8E-67 T 20-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AMC99_RS02770 25ca677b4be4615f4b532951cee73624 191 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 31 183 5.3E-55 T 20-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AMC99_RS02770 25ca677b4be4615f4b532951cee73624 191 SUPERFAMILY SSF110111 66 187 3.01E-48 T 20-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain AMC99_RS02770 25ca677b4be4615f4b532951cee73624 191 PANTHER PTHR21320:SF3 8 187 3.8E-67 T 20-04-2016 AMC99_RS02835 f7326a785ba6c1d0fe6c2dbef8af82da 159 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 97 1.3E-32 T 20-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 AMC99_RS02835 f7326a785ba6c1d0fe6c2dbef8af82da 159 PANTHER PTHR21349 1 117 4.2E-41 T 20-04-2016 AMC99_RS02835 f7326a785ba6c1d0fe6c2dbef8af82da 159 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 99 23.199 T 20-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS02835 f7326a785ba6c1d0fe6c2dbef8af82da 159 SUPERFAMILY SSF141091 1 97 2.22E-30 T 20-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 AMC99_RS02835 f7326a785ba6c1d0fe6c2dbef8af82da 159 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 96 6.0E-24 T 20-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS10260 7c9128b2b6e6cdab6c6dbc9cb76cec7a 120 PANTHER PTHR26402 1 120 2.5E-31 T 20-04-2016 AMC99_RS10260 7c9128b2b6e6cdab6c6dbc9cb76cec7a 120 SMART SM00448 1 115 2.2E-28 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS10260 7c9128b2b6e6cdab6c6dbc9cb76cec7a 120 Gene3D G3DSA:3.40.50.2300 1 120 6.8E-34 T 20-04-2016 AMC99_RS10260 7c9128b2b6e6cdab6c6dbc9cb76cec7a 120 Pfam PF00072 Response regulator receiver domain 3 115 5.8E-25 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS10260 7c9128b2b6e6cdab6c6dbc9cb76cec7a 120 SUPERFAMILY SSF52172 1 120 1.11E-33 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS10900 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00465 E-class P450 group IV signature 50 73 1.7E-17 T 20-04-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS10900 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00465 E-class P450 group IV signature 374 392 1.7E-17 T 20-04-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS10900 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00465 E-class P450 group IV signature 398 414 1.7E-17 T 20-04-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS10900 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00465 E-class P450 group IV signature 414 432 1.7E-17 T 20-04-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS10900 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00465 E-class P450 group IV signature 325 341 1.7E-17 T 20-04-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS10900 7b97f01f54e587f860216244d575e99e 466 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 407 416 - T 20-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 AMC99_RS10900 7b97f01f54e587f860216244d575e99e 466 Pfam PF00067 Cytochrome P450 30 446 7.5E-66 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS10900 7b97f01f54e587f860216244d575e99e 466 Gene3D G3DSA:1.10.630.10 26 465 7.5E-107 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS10900 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00385 P450 superfamily signature 414 425 1.6E-5 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS10900 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00385 P450 superfamily signature 405 414 1.6E-5 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS10900 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00385 P450 superfamily signature 330 341 1.6E-5 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS10900 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00385 P450 superfamily signature 271 288 1.6E-5 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS10900 7b97f01f54e587f860216244d575e99e 466 PANTHER PTHR24286 19 465 1.7E-113 T 20-04-2016 AMC99_RS10900 7b97f01f54e587f860216244d575e99e 466 SUPERFAMILY SSF48264 26 465 4.32E-107 T 20-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMC99_RS08580 8a7a4f92bd49334c2cc7db5327554bcf 179 Gene3D G3DSA:3.40.630.30 15 129 2.8E-11 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS08580 8a7a4f92bd49334c2cc7db5327554bcf 179 SUPERFAMILY SSF55729 14 134 2.06E-16 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS08580 8a7a4f92bd49334c2cc7db5327554bcf 179 Pfam PF13527 Acetyltransferase (GNAT) domain 15 107 1.2E-9 T 20-04-2016 AMC99_RS12965 36cce86adf286a1baae2872475a4592b 106 SUPERFAMILY SSF55729 10 103 8.48E-17 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS12965 36cce86adf286a1baae2872475a4592b 106 Pfam PF14542 GCN5-related N-acetyl-transferase 21 103 4.1E-20 T 20-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AMC99_RS12965 36cce86adf286a1baae2872475a4592b 106 Gene3D G3DSA:3.40.630.30 11 104 3.2E-20 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS12965 36cce86adf286a1baae2872475a4592b 106 PANTHER PTHR31435 52 105 8.1E-14 T 20-04-2016 AMC99_RS04415 9385d29e59c46b9fc2914dd7300fe17c 161 SUPERFAMILY SSF88697 5 151 5.22E-38 T 20-04-2016 IPR015947 PUA-like domain AMC99_RS04415 9385d29e59c46b9fc2914dd7300fe17c 161 Gene3D G3DSA:3.10.400.10 5 152 1.3E-44 T 20-04-2016 AMC99_RS04415 9385d29e59c46b9fc2914dd7300fe17c 161 PIRSF PIRSF021320 2 154 2.2E-36 T 20-04-2016 IPR009326 Protein of unknown function DUF984 AMC99_RS04415 9385d29e59c46b9fc2914dd7300fe17c 161 PANTHER PTHR39203 1 154 1.0E-32 T 20-04-2016 AMC99_RS04415 9385d29e59c46b9fc2914dd7300fe17c 161 Pfam PF04266 ASCH domain 40 149 6.9E-16 T 20-04-2016 IPR007374 ASCH domain AMC99_RS04415 9385d29e59c46b9fc2914dd7300fe17c 161 SMART SM01022 28 151 6.0E-27 T 20-04-2016 IPR007374 ASCH domain AMC99_RS11465 065083a3adb15bc59d9d26035984866b 358 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 176 357 1.2E-66 T 20-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMC99_RS11465 065083a3adb15bc59d9d26035984866b 358 SUPERFAMILY SSF142695 168 335 1.7E-55 T 20-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMC99_RS11465 065083a3adb15bc59d9d26035984866b 358 Pfam PF00925 GTP cyclohydrolase II 166 333 1.2E-60 T 20-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMC99_RS11465 065083a3adb15bc59d9d26035984866b 358 PANTHER PTHR21327 164 357 9.7E-91 T 20-04-2016 AMC99_RS11465 065083a3adb15bc59d9d26035984866b 358 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 159 358 38.61 T 20-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMC99_RS00140 8ab54a57f325a1a422349fdd7622d9ac 236 Pfam PF13362 Toprim domain 142 229 2.0E-11 T 20-04-2016 IPR006171 Toprim domain AMC99_RS12510 19fbe495ac123fc78e9e8d1460e62ed6 177 Pfam PF02559 CarD-like/TRCF domain 8 115 6.0E-17 T 20-04-2016 IPR003711 CarD-like/TRCF domain AMC99_RS12510 19fbe495ac123fc78e9e8d1460e62ed6 177 PANTHER PTHR38447 7 176 3.4E-43 T 20-04-2016 AMC99_RS12510 19fbe495ac123fc78e9e8d1460e62ed6 177 SMART SM01058 7 117 1.0E-35 T 20-04-2016 IPR003711 CarD-like/TRCF domain AMC99_RS12510 19fbe495ac123fc78e9e8d1460e62ed6 177 SUPERFAMILY SSF141259 6 73 8.5E-18 T 20-04-2016 IPR003711 CarD-like/TRCF domain AMC99_RS08335 ea94e5df2d8ca3559aa792bdb1a81f7d 107 Pfam PF07345 Domain of unknown function (DUF1476) 1 102 7.3E-38 T 20-04-2016 IPR009945 Protein of unknown function DUF1476 AMC99_RS08335 ea94e5df2d8ca3559aa792bdb1a81f7d 107 PIRSF PIRSF031780 1 106 6.6E-35 T 20-04-2016 IPR009945 Protein of unknown function DUF1476 AMC99_RS06245 75f425fe843ba7d41f9416e331221e1d 248 Pfam PF00483 Nucleotidyl transferase 5 123 1.4E-12 T 20-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMC99_RS06245 75f425fe843ba7d41f9416e331221e1d 248 Gene3D G3DSA:3.90.550.10 4 241 9.2E-34 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS06245 75f425fe843ba7d41f9416e331221e1d 248 SUPERFAMILY SSF53448 3 241 1.17E-35 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_RS06245 75f425fe843ba7d41f9416e331221e1d 248 PANTHER PTHR22572 4 117 4.7E-23 T 20-04-2016 AMC99_RS01910 400037993706d98483e2bd6fe9541085 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.7E-13 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS01910 400037993706d98483e2bd6fe9541085 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 7.9E-9 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS01910 400037993706d98483e2bd6fe9541085 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 7.9E-9 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_RS01910 400037993706d98483e2bd6fe9541085 206 Gene3D G3DSA:1.10.357.10 3 175 1.6E-25 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMC99_RS01910 400037993706d98483e2bd6fe9541085 206 PANTHER PTHR30055 2 175 4.6E-18 T 20-04-2016 AMC99_RS01910 400037993706d98483e2bd6fe9541085 206 SUPERFAMILY SSF46689 3 75 2.57E-16 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS01910 400037993706d98483e2bd6fe9541085 206 SUPERFAMILY SSF48498 101 182 2.76E-6 T 20-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMC99_RS05005 d32305a22eaf2a44abb630bc37c9b9e1 161 Gene3D G3DSA:3.40.50.360 2 156 1.4E-25 T 20-04-2016 IPR029039 Flavoprotein-like domain AMC99_RS05005 d32305a22eaf2a44abb630bc37c9b9e1 161 SUPERFAMILY SSF52218 5 154 8.64E-23 T 20-04-2016 IPR029039 Flavoprotein-like domain AMC99_RS08965 a48b58b002bb2592c2ed21a1efa21222 364 Gene3D G3DSA:1.10.443.10 216 350 8.2E-14 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_RS08965 a48b58b002bb2592c2ed21a1efa21222 364 SUPERFAMILY SSF56349 97 352 1.56E-35 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMC99_RS08965 a48b58b002bb2592c2ed21a1efa21222 364 Gene3D G3DSA:1.10.150.130 98 195 7.7E-10 T 20-04-2016 IPR023109 Integrase/recombinase, N-terminal AMC99_RS08965 a48b58b002bb2592c2ed21a1efa21222 364 Pfam PF00589 Phage integrase family 224 337 6.0E-6 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_RS08965 a48b58b002bb2592c2ed21a1efa21222 364 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 107 170 5.4E-5 T 20-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMC99_RS07845 a19f11be73951e8269e4ea1d315da179 153 Pfam PF00583 Acetyltransferase (GNAT) family 57 127 8.9E-14 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS07845 a19f11be73951e8269e4ea1d315da179 153 PANTHER PTHR23091:SF1 1 147 4.2E-17 T 20-04-2016 AMC99_RS07845 a19f11be73951e8269e4ea1d315da179 153 Gene3D G3DSA:3.40.630.30 5 149 9.5E-27 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS07845 a19f11be73951e8269e4ea1d315da179 153 SUPERFAMILY SSF55729 8 149 2.4E-23 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS07845 a19f11be73951e8269e4ea1d315da179 153 PANTHER PTHR23091 1 147 4.2E-17 T 20-04-2016 AMC99_RS05545 6e30d3b270b241135698a3328f6fc84d 286 Gene3D G3DSA:3.40.1010.10 19 124 7.9E-15 T 20-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 AMC99_RS05545 6e30d3b270b241135698a3328f6fc84d 286 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 18 235 36.534 T 20-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS05545 6e30d3b270b241135698a3328f6fc84d 286 Gene3D G3DSA:3.30.950.10 125 235 2.1E-36 T 20-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 AMC99_RS05545 6e30d3b270b241135698a3328f6fc84d 286 PANTHER PTHR21091 11 233 1.7E-73 T 20-04-2016 AMC99_RS05545 6e30d3b270b241135698a3328f6fc84d 286 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 19 216 1.4E-23 T 20-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMC99_RS05545 6e30d3b270b241135698a3328f6fc84d 286 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 95 106 - T 20-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS05545 6e30d3b270b241135698a3328f6fc84d 286 PANTHER PTHR21091:SF18 11 233 1.7E-73 T 20-04-2016 AMC99_RS05545 6e30d3b270b241135698a3328f6fc84d 286 PIRSF PIRSF005917 8 286 1.1E-94 T 20-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS05545 6e30d3b270b241135698a3328f6fc84d 286 SUPERFAMILY SSF53790 17 233 2.75E-75 T 20-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMC99_RS05545 6e30d3b270b241135698a3328f6fc84d 286 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 19 281 9.2E-74 T 20-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMC99_RS12515 62fa64e1874a6140e635cb47fb74c344 112 Pfam PF11953 Domain of unknown function (DUF3470) 64 104 3.0E-19 T 20-04-2016 IPR022569 Ferredoxin, C-terminal AMC99_RS12515 62fa64e1874a6140e635cb47fb74c344 112 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_RS12515 62fa64e1874a6140e635cb47fb74c344 112 PANTHER PTHR11938 1 80 5.2E-34 T 20-04-2016 AMC99_RS12515 62fa64e1874a6140e635cb47fb74c344 112 SUPERFAMILY SSF54862 3 103 4.75E-24 T 20-04-2016 AMC99_RS12515 62fa64e1874a6140e635cb47fb74c344 112 PRINTS PR00354 7Fe ferredoxin signature 19 29 9.0E-18 T 20-04-2016 IPR000813 7Fe ferredoxin GO:0009055 AMC99_RS12515 62fa64e1874a6140e635cb47fb74c344 112 PRINTS PR00354 7Fe ferredoxin signature 9 19 9.0E-18 T 20-04-2016 IPR000813 7Fe ferredoxin GO:0009055 AMC99_RS12515 62fa64e1874a6140e635cb47fb74c344 112 PRINTS PR00354 7Fe ferredoxin signature 35 52 9.0E-18 T 20-04-2016 IPR000813 7Fe ferredoxin GO:0009055 AMC99_RS12515 62fa64e1874a6140e635cb47fb74c344 112 Gene3D G3DSA:3.30.70.20 3 85 1.3E-19 T 20-04-2016 AMC99_RS12515 62fa64e1874a6140e635cb47fb74c344 112 PANTHER PTHR11938:SF101 1 80 5.2E-34 T 20-04-2016 AMC99_RS12515 62fa64e1874a6140e635cb47fb74c344 112 Pfam PF00037 4Fe-4S binding domain 34 55 3.0E-7 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_RS13380 1da106fd5fcfcdb61d89f040eead6451 242 SUPERFAMILY SSF51695 15 223 1.99E-43 T 20-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AMC99_RS13380 1da106fd5fcfcdb61d89f040eead6451 242 PANTHER PTHR23344 16 235 8.9E-29 T 20-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 AMC99_RS13380 1da106fd5fcfcdb61d89f040eead6451 242 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 17 222 7.7E-21 T 20-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMC99_RS13380 1da106fd5fcfcdb61d89f040eead6451 242 Gene3D G3DSA:3.20.20.190 15 227 1.5E-41 T 20-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AMC99_RS13385 637e830a9c3525fc712726b671c9ded8 378 SUPERFAMILY SSF55729 180 351 2.91E-40 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS13385 637e830a9c3525fc712726b671c9ded8 378 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 14 377 8.5E-152 T 20-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition AMC99_RS13385 637e830a9c3525fc712726b671c9ded8 378 PANTHER PTHR31384 53 313 6.3E-63 T 20-04-2016 AMC99_RS13385 637e830a9c3525fc712726b671c9ded8 378 Gene3D G3DSA:3.40.630.30 179 326 9.9E-23 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS07180 c2f28382e0904458c7681c1fabf4d906 647 Gene3D G3DSA:1.25.20.10 344 386 4.6E-4 T 20-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AMC99_RS07180 c2f28382e0904458c7681c1fabf4d906 647 Gene3D G3DSA:1.25.20.10 55 202 8.7E-10 T 20-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AMC99_RS07180 c2f28382e0904458c7681c1fabf4d906 647 PANTHER PTHR21666 488 642 1.3E-35 T 20-04-2016 AMC99_RS07180 c2f28382e0904458c7681c1fabf4d906 647 Pfam PF01464 Transglycosylase SLT domain 488 592 8.0E-24 T 20-04-2016 IPR008258 Transglycosylase SLT domain 1 AMC99_RS07180 c2f28382e0904458c7681c1fabf4d906 647 Gene3D G3DSA:1.10.530.10 488 630 6.9E-40 T 20-04-2016 AMC99_RS07180 c2f28382e0904458c7681c1fabf4d906 647 SUPERFAMILY SSF53955 488 629 8.66E-38 T 20-04-2016 IPR023346 Lysozyme-like domain AMC99_RS07180 c2f28382e0904458c7681c1fabf4d906 647 SUPERFAMILY SSF48435 46 469 3.27E-39 T 20-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AMC99_RS13755 c4c253abe1685d4ef3aa2fada7a4e806 254 Pfam PF02517 CAAX protease self-immunity 86 241 7.4E-12 T 20-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 AMC99_RS12255 8c79464386b36971ea8e12724468280c 136 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 7 136 32.312 T 20-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid AMC99_RS12255 8c79464386b36971ea8e12724468280c 136 PANTHER PTHR21569 2 136 2.2E-65 T 20-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AMC99_RS12255 8c79464386b36971ea8e12724468280c 136 SUPERFAMILY SSF54211 11 136 2.05E-46 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_RS12255 8c79464386b36971ea8e12724468280c 136 PANTHER PTHR21569:SF1 2 136 2.2E-65 T 20-04-2016 AMC99_RS12255 8c79464386b36971ea8e12724468280c 136 Gene3D G3DSA:3.30.230.10 10 136 3.0E-51 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_RS12255 8c79464386b36971ea8e12724468280c 136 Pfam PF00380 Ribosomal protein S9/S16 16 136 5.8E-47 T 20-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AMC99_RS05425 cb781d2263b92bdf70c00875b136b388 110 PANTHER PTHR21256 3 108 2.7E-55 T 20-04-2016 AMC99_RS05425 cb781d2263b92bdf70c00875b136b388 110 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 24 97 1.1E-33 T 20-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 AMC99_RS05425 cb781d2263b92bdf70c00875b136b388 110 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 47 100 6.0E-17 T 20-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 AMC99_RS05425 cb781d2263b92bdf70c00875b136b388 110 SUPERFAMILY SSF141734 2 106 1.83E-44 T 20-04-2016 AMC99_RS05295 189363fe141afefdd2f650e538524ca1 140 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 1 138 21.525 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMC99_RS05295 189363fe141afefdd2f650e538524ca1 140 Gene3D G3DSA:3.40.50.960 2 135 5.2E-46 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMC99_RS05295 189363fe141afefdd2f650e538524ca1 140 SUPERFAMILY SSF52121 3 138 3.66E-44 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMC99_RS05295 189363fe141afefdd2f650e538524ca1 140 PANTHER PTHR21058 2 139 3.1E-39 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMC99_RS05295 189363fe141afefdd2f650e538524ca1 140 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 3 132 5.4E-32 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMC99_RS05295 189363fe141afefdd2f650e538524ca1 140 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 2 134 1.0E-40 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMC99_RS10635 914834c933b4c530dd1a70161adc45c2 502 PANTHER PTHR23023:SF30 6 469 4.2E-198 T 20-04-2016 AMC99_RS10635 914834c933b4c530dd1a70161adc45c2 502 SUPERFAMILY SSF51905 3 384 1.2E-48 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS10635 914834c933b4c530dd1a70161adc45c2 502 PANTHER PTHR23023 6 469 4.2E-198 T 20-04-2016 AMC99_RS10635 914834c933b4c530dd1a70161adc45c2 502 Gene3D G3DSA:3.50.50.60 313 463 1.4E-5 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS10635 914834c933b4c530dd1a70161adc45c2 502 Gene3D G3DSA:3.50.50.60 3 274 2.1E-50 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS10635 914834c933b4c530dd1a70161adc45c2 502 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 11 258 2.3E-15 T 20-04-2016 AMC99_RS11195 26635806a310940d8b03c8490ff1a7f7 314 SMART SM00382 40 229 6.9E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS11195 26635806a310940d8b03c8490ff1a7f7 314 Gene3D G3DSA:3.40.50.300 4 236 7.4E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11195 26635806a310940d8b03c8490ff1a7f7 314 Pfam PF00005 ABC transporter 31 173 2.1E-30 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS11195 26635806a310940d8b03c8490ff1a7f7 314 PANTHER PTHR24220:SF305 11 232 5.4E-110 T 20-04-2016 AMC99_RS11195 26635806a310940d8b03c8490ff1a7f7 314 PANTHER PTHR24220 11 232 5.4E-110 T 20-04-2016 AMC99_RS11195 26635806a310940d8b03c8490ff1a7f7 314 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_RS11195 26635806a310940d8b03c8490ff1a7f7 314 SUPERFAMILY SSF52540 6 235 6.43E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS06650 6b6db8388f92fc8bc096c4907791ab63 267 PANTHER PTHR37423 1 258 6.1E-56 T 20-04-2016 AMC99_RS06650 6b6db8388f92fc8bc096c4907791ab63 267 Pfam PF13525 Outer membrane lipoprotein 43 234 3.3E-48 T 20-04-2016 AMC99_RS06650 6b6db8388f92fc8bc096c4907791ab63 267 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 8 245 38.067 T 20-04-2016 IPR017689 Outer membrane protein assembly factor BamD AMC99_RS06650 6b6db8388f92fc8bc096c4907791ab63 267 SUPERFAMILY SSF48452 42 161 1.07E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS06650 6b6db8388f92fc8bc096c4907791ab63 267 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 13 250 1.5E-83 T 20-04-2016 IPR017689 Outer membrane protein assembly factor BamD AMC99_RS06650 6b6db8388f92fc8bc096c4907791ab63 267 Gene3D G3DSA:1.25.40.10 43 236 9.7E-13 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS08945 4e34075429b70b34a8ef63ae9d9b6d30 799 Pfam PF08707 Primase C terminal 2 (PriCT-2) 225 289 3.3E-9 T 20-04-2016 IPR014819 Primase, C-terminal 2 GO:0016817 AMC99_RS08945 4e34075429b70b34a8ef63ae9d9b6d30 799 SMART SM00943 39 189 4.9E-10 T 20-04-2016 IPR015330 DNA primase/polymerase, bifunctional, N-terminal AMC99_RS08945 4e34075429b70b34a8ef63ae9d9b6d30 799 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 46 186 5.7E-15 T 20-04-2016 IPR015330 DNA primase/polymerase, bifunctional, N-terminal AMC99_RS08945 4e34075429b70b34a8ef63ae9d9b6d30 799 SUPERFAMILY SSF56747 60 194 5.3E-8 T 20-04-2016 AMC99_RS13415 0f0dff577e34fac529332405f2cb8d38 263 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 1 263 38.547 T 20-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 AMC99_RS13415 0f0dff577e34fac529332405f2cb8d38 263 SUPERFAMILY SSF140959 6 262 6.15E-99 T 20-04-2016 AMC99_RS13415 0f0dff577e34fac529332405f2cb8d38 263 Pfam PF03301 Tryptophan 2,3-dioxygenase 4 127 3.1E-38 T 20-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 AMC99_RS13415 0f0dff577e34fac529332405f2cb8d38 263 Pfam PF03301 Tryptophan 2,3-dioxygenase 190 262 3.3E-20 T 20-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 AMC99_RS13415 0f0dff577e34fac529332405f2cb8d38 263 PANTHER PTHR10138 1 261 2.1E-85 T 20-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 AMC99_RS13415 0f0dff577e34fac529332405f2cb8d38 263 PANTHER PTHR10138:SF0 1 261 2.1E-85 T 20-04-2016 AMC99_RS00170 c7bfd5899da605b30935af7de2806aa1 415 Gene3D G3DSA:3.40.50.1000 14 130 6.8E-11 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS00170 c7bfd5899da605b30935af7de2806aa1 415 SUPERFAMILY SSF56784 6 131 1.82E-11 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS00170 c7bfd5899da605b30935af7de2806aa1 415 SUPERFAMILY SSF53271 299 348 3.28E-8 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like AMC99_RS00170 c7bfd5899da605b30935af7de2806aa1 415 Gene3D G3DSA:3.40.50.2020 209 267 1.2E-7 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like AMC99_RS00170 c7bfd5899da605b30935af7de2806aa1 415 Gene3D G3DSA:3.40.50.2020 312 354 1.2E-7 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like AMC99_RS01745 992a641ad2dcd118bea9964599955b44 53 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 2 46 3.8E-17 T 20-04-2016 IPR008621 Cbb3-type cytochrome oxidase component AMC99_RS05760 e54c15b94309a4773a0609a562415be4 252 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 170 221 2.9E-4 T 20-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AMC99_RS05760 e54c15b94309a4773a0609a562415be4 252 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 3.1E-27 T 20-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AMC99_RS05760 e54c15b94309a4773a0609a562415be4 252 PANTHER PTHR30522 4 252 3.6E-99 T 20-04-2016 AMC99_RS05760 e54c15b94309a4773a0609a562415be4 252 PANTHER PTHR30522:SF0 4 252 3.6E-99 T 20-04-2016 IPR011551 NTP pyrophosphohydrolase MazG AMC99_RS05760 e54c15b94309a4773a0609a562415be4 252 Gene3D G3DSA:1.10.287.1080 21 73 1.5E-7 T 20-04-2016 AMC99_RS05760 e54c15b94309a4773a0609a562415be4 252 Gene3D G3DSA:1.10.287.1080 132 214 1.2E-8 T 20-04-2016 AMC99_RS05760 e54c15b94309a4773a0609a562415be4 252 SUPERFAMILY SSF101386 137 229 2.06E-20 T 20-04-2016 AMC99_RS05760 e54c15b94309a4773a0609a562415be4 252 TIGRFAM TIGR00444 mazG: MazG family protein 11 249 4.3E-83 T 20-04-2016 IPR011551 NTP pyrophosphohydrolase MazG AMC99_RS05760 e54c15b94309a4773a0609a562415be4 252 SUPERFAMILY SSF101386 4 104 1.96E-23 T 20-04-2016 AMC99_RS05955 044cbf75835bc82022f62567ae0dc891 508 PANTHER PTHR11236 24 503 4.8E-194 T 20-04-2016 AMC99_RS05955 044cbf75835bc82022f62567ae0dc891 508 Pfam PF04715 Anthranilate synthase component I, N terminal region 31 175 4.4E-25 T 20-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMC99_RS05955 044cbf75835bc82022f62567ae0dc891 508 SUPERFAMILY SSF56322 22 493 3.4E-144 T 20-04-2016 IPR005801 ADC synthase GO:0009058 AMC99_RS05955 044cbf75835bc82022f62567ae0dc891 508 PRINTS PR00095 Anthranilate synthase component I signature 334 347 3.3E-21 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMC99_RS05955 044cbf75835bc82022f62567ae0dc891 508 PRINTS PR00095 Anthranilate synthase component I signature 428 442 3.3E-21 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMC99_RS05955 044cbf75835bc82022f62567ae0dc891 508 PRINTS PR00095 Anthranilate synthase component I signature 348 361 3.3E-21 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMC99_RS05955 044cbf75835bc82022f62567ae0dc891 508 PRINTS PR00095 Anthranilate synthase component I signature 443 457 3.3E-21 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMC99_RS05955 044cbf75835bc82022f62567ae0dc891 508 Pfam PF00425 chorismate binding enzyme 228 486 4.5E-94 T 20-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal AMC99_RS05955 044cbf75835bc82022f62567ae0dc891 508 PANTHER PTHR11236:SF9 24 503 4.8E-194 T 20-04-2016 AMC99_RS05955 044cbf75835bc82022f62567ae0dc891 508 Gene3D G3DSA:3.60.120.10 20 497 2.6E-160 T 20-04-2016 IPR005801 ADC synthase GO:0009058 AMC99_RS05955 044cbf75835bc82022f62567ae0dc891 508 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 30 493 8.4E-160 T 20-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMC99_RS08435 f02ef05e338c7e0ca1fb02c77078a54e 292 SUPERFAMILY SSF103481 178 284 1.83E-9 T 20-04-2016 AMC99_RS08435 f02ef05e338c7e0ca1fb02c77078a54e 292 SUPERFAMILY SSF103481 33 134 2.48E-13 T 20-04-2016 AMC99_RS08435 f02ef05e338c7e0ca1fb02c77078a54e 292 Pfam PF00892 EamA-like transporter family 140 274 2.0E-8 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_RS08435 f02ef05e338c7e0ca1fb02c77078a54e 292 Pfam PF00892 EamA-like transporter family 2 131 7.2E-12 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_RS08435 f02ef05e338c7e0ca1fb02c77078a54e 292 PANTHER PTHR22911 1 284 1.6E-36 T 20-04-2016 AMC99_RS13125 a6fd42a069e968352e419910471e5677 337 Pfam PF12833 Helix-turn-helix domain 223 301 1.4E-11 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_RS13125 a6fd42a069e968352e419910471e5677 337 Gene3D G3DSA:1.10.10.60 276 303 9.9E-5 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS13125 a6fd42a069e968352e419910471e5677 337 SMART SM00342 215 299 1.9E-4 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_RS04960 cdcca06f2c0a25fd88c35ee44118e8d6 223 Pfam PF01895 PhoU domain 22 109 4.2E-23 T 20-04-2016 IPR026022 PhoU domain AMC99_RS04960 cdcca06f2c0a25fd88c35ee44118e8d6 223 Pfam PF01895 PhoU domain 126 208 1.9E-22 T 20-04-2016 IPR026022 PhoU domain AMC99_RS04960 cdcca06f2c0a25fd88c35ee44118e8d6 223 PANTHER PTHR10010 2 216 3.2E-66 T 20-04-2016 AMC99_RS04960 cdcca06f2c0a25fd88c35ee44118e8d6 223 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 216 1.6E-67 T 20-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMC99_RS04960 cdcca06f2c0a25fd88c35ee44118e8d6 223 Gene3D G3DSA:1.20.58.220 4 112 9.7E-32 T 20-04-2016 AMC99_RS04960 cdcca06f2c0a25fd88c35ee44118e8d6 223 PIRSF PIRSF003107 3 222 1.4E-65 T 20-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMC99_RS04960 cdcca06f2c0a25fd88c35ee44118e8d6 223 Gene3D G3DSA:1.20.58.220 123 216 1.7E-30 T 20-04-2016 AMC99_RS04960 cdcca06f2c0a25fd88c35ee44118e8d6 223 SUPERFAMILY SSF109755 8 218 3.24E-69 T 20-04-2016 AMC99_RS04960 cdcca06f2c0a25fd88c35ee44118e8d6 223 PANTHER PTHR10010:SF14 2 216 3.2E-66 T 20-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMC99_RS04105 499ffe062c50479e1f7a72e53da03715 71 Pfam PF04024 PspC domain 20 69 2.4E-14 T 20-04-2016 IPR007168 Phage shock protein, PspC, N-terminal AMC99_RS01235 ed57c84f998f716ccfc2a945b185abdb 178 PANTHER PTHR36918:SF1 10 172 5.6E-39 T 20-04-2016 AMC99_RS01235 ed57c84f998f716ccfc2a945b185abdb 178 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 23 159 1.4E-37 T 20-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_RS01235 ed57c84f998f716ccfc2a945b185abdb 178 SUPERFAMILY SSF54611 27 158 4.14E-46 T 20-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_RS01235 ed57c84f998f716ccfc2a945b185abdb 178 PANTHER PTHR36918 10 172 5.6E-39 T 20-04-2016 AMC99_RS01235 ed57c84f998f716ccfc2a945b185abdb 178 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 113 135 5.3E-24 T 20-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_RS01235 ed57c84f998f716ccfc2a945b185abdb 178 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 29 46 5.3E-24 T 20-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_RS01235 ed57c84f998f716ccfc2a945b185abdb 178 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 139 157 5.3E-24 T 20-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_RS01235 ed57c84f998f716ccfc2a945b185abdb 178 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 89 109 5.3E-24 T 20-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_RS01235 ed57c84f998f716ccfc2a945b185abdb 178 Pfam PF02556 Preprotein translocase subunit SecB 23 159 4.3E-47 T 20-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_RS01235 ed57c84f998f716ccfc2a945b185abdb 178 Gene3D G3DSA:3.10.420.10 20 166 5.4E-51 T 20-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_RS01235 ed57c84f998f716ccfc2a945b185abdb 178 Hamap MF_00821 Protein-export protein SecB [secB]. 1 161 27.202 T 20-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_RS09460 fe8f2fe2545f4e10036380397110de03 484 Pfam PF13469 Sulfotransferase family 249 436 9.6E-28 T 20-04-2016 AMC99_RS09460 fe8f2fe2545f4e10036380397110de03 484 SUPERFAMILY SSF48452 4 207 1.0E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS09460 fe8f2fe2545f4e10036380397110de03 484 Gene3D G3DSA:3.40.50.300 238 462 5.2E-18 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09460 fe8f2fe2545f4e10036380397110de03 484 Gene3D G3DSA:1.25.40.10 185 208 2.2E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS09460 fe8f2fe2545f4e10036380397110de03 484 Gene3D G3DSA:1.25.40.10 4 146 2.2E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS09460 fe8f2fe2545f4e10036380397110de03 484 SUPERFAMILY SSF52540 244 466 1.67E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09460 fe8f2fe2545f4e10036380397110de03 484 SMART SM00028 106 139 5.1 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS09460 fe8f2fe2545f4e10036380397110de03 484 SMART SM00028 178 211 11.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS09460 fe8f2fe2545f4e10036380397110de03 484 Pfam PF13181 Tetratricopeptide repeat 108 138 0.1 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS06240 1f46cb39c2ea90335914dc43abac1df9 142 Gene3D G3DSA:3.30.428.10 11 138 4.3E-23 T 20-04-2016 IPR011146 HIT-like domain GO:0003824 AMC99_RS06240 1f46cb39c2ea90335914dc43abac1df9 142 SUPERFAMILY SSF54197 10 141 1.83E-23 T 20-04-2016 IPR011146 HIT-like domain GO:0003824 AMC99_RS06240 1f46cb39c2ea90335914dc43abac1df9 142 Pfam PF01230 HIT domain 16 98 1.3E-4 T 20-04-2016 IPR001310 Histidine triad (HIT) protein AMC99_RS09580 75e06d0e3d4972f7ed5ce5d6256c74fe 136 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 10 133 18.567 T 20-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMC99_RS09580 75e06d0e3d4972f7ed5ce5d6256c74fe 136 TIGRFAM TIGR00494 crcB: protein CrcB 12 131 8.6E-26 T 20-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMC99_RS09580 75e06d0e3d4972f7ed5ce5d6256c74fe 136 PANTHER PTHR28259 13 136 7.5E-32 T 20-04-2016 AMC99_RS09580 75e06d0e3d4972f7ed5ce5d6256c74fe 136 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 12 128 9.8E-22 T 20-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMC99_RS05110 7105207d11917c3474fb364cc25bb3ca 133 Pfam PF09945 Predicted membrane protein (DUF2177) 3 124 2.0E-39 T 20-04-2016 IPR018687 Protein of unknown function DUF2177, membrane AMC99_RS02345 e07b94c1f5e44931a2bd5c6fe61c5a83 427 Pfam PF07690 Major Facilitator Superfamily 263 426 1.5E-15 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS02345 e07b94c1f5e44931a2bd5c6fe61c5a83 427 Gene3D G3DSA:1.20.1250.20 258 424 1.1E-18 T 20-04-2016 AMC99_RS02345 e07b94c1f5e44931a2bd5c6fe61c5a83 427 Gene3D G3DSA:1.20.1250.20 25 219 6.7E-5 T 20-04-2016 AMC99_RS02345 e07b94c1f5e44931a2bd5c6fe61c5a83 427 SUPERFAMILY SSF103473 39 424 1.96E-31 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS02345 e07b94c1f5e44931a2bd5c6fe61c5a83 427 PANTHER PTHR23526 9 422 8.1E-31 T 20-04-2016 AMC99_RS12530 f3e9813f2ff2b62901367268cd367961 502 Pfam PF01551 Peptidase family M23 346 440 1.3E-32 T 20-04-2016 IPR016047 Peptidase M23 AMC99_RS12530 f3e9813f2ff2b62901367268cd367961 502 PANTHER PTHR21666 226 443 7.5E-47 T 20-04-2016 AMC99_RS12530 f3e9813f2ff2b62901367268cd367961 502 SUPERFAMILY SSF51261 205 441 2.93E-61 T 20-04-2016 IPR011055 Duplicated hybrid motif AMC99_RS12530 f3e9813f2ff2b62901367268cd367961 502 Gene3D G3DSA:2.70.70.10 307 442 1.1E-50 T 20-04-2016 AMC99_RS11725 19a63e76d5a3843475e737ac18984e2e 897 SUPERFAMILY SSF81301 4 243 4.9E-51 T 20-04-2016 AMC99_RS11725 19a63e76d5a3843475e737ac18984e2e 897 SUPERFAMILY SSF81593 246 396 5.1E-38 T 20-04-2016 AMC99_RS11725 19a63e76d5a3843475e737ac18984e2e 897 SUPERFAMILY SSF81593 752 889 6.67E-20 T 20-04-2016 AMC99_RS11725 19a63e76d5a3843475e737ac18984e2e 897 SUPERFAMILY SSF81301 472 749 3.6E-64 T 20-04-2016 AMC99_RS11725 19a63e76d5a3843475e737ac18984e2e 897 Gene3D G3DSA:3.30.460.10 584 748 9.9E-48 T 20-04-2016 AMC99_RS11725 19a63e76d5a3843475e737ac18984e2e 897 Gene3D G3DSA:3.30.460.10 81 243 1.4E-43 T 20-04-2016 AMC99_RS11725 19a63e76d5a3843475e737ac18984e2e 897 Pfam PF08335 GlnD PII-uridylyltransferase 769 885 3.1E-4 T 20-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMC99_RS11725 19a63e76d5a3843475e737ac18984e2e 897 Pfam PF08335 GlnD PII-uridylyltransferase 272 396 2.9E-33 T 20-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMC99_RS11725 19a63e76d5a3843475e737ac18984e2e 897 PANTHER PTHR30621 7 844 5.0E-193 T 20-04-2016 AMC99_RS11725 19a63e76d5a3843475e737ac18984e2e 897 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 12 235 1.8E-42 T 20-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AMC99_RS11725 19a63e76d5a3843475e737ac18984e2e 897 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 499 740 8.6E-60 T 20-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AMC99_RS03315 bcc2c8d524ac6f9f9f34940da0fa6406 368 Pfam PF14378 PAP2 superfamily 138 338 3.4E-23 T 20-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 AMC99_RS06095 f36687167c41975e3607c4b61bc0f4e7 351 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 16 344 24.057 T 20-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 AMC99_RS06095 f36687167c41975e3607c4b61bc0f4e7 351 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 225 238 - T 20-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 AMC99_RS06095 f36687167c41975e3607c4b61bc0f4e7 351 Pfam PF00146 NADH dehydrogenase 24 337 2.2E-120 T 20-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 AMC99_RS06095 f36687167c41975e3607c4b61bc0f4e7 351 PANTHER PTHR11432:SF3 1 349 1.3E-158 T 20-04-2016 AMC99_RS06095 f36687167c41975e3607c4b61bc0f4e7 351 PANTHER PTHR11432 1 349 1.3E-158 T 20-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 AMC99_RS09975 ecf92031fdd1eee803d85a801b36c96f 65 Pfam PF04325 Protein of unknown function (DUF465) 12 55 3.5E-16 T 20-04-2016 IPR007420 Protein of unknown function DUF465 AMC99_RS09680 2a33097dedfc26259506d27efe947791 283 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 70 283 1.2E-37 T 20-04-2016 IPR010239 Conserved hypothetical protein CHP02001 AMC99_RS09680 2a33097dedfc26259506d27efe947791 283 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 66 263 1.4E-65 T 20-04-2016 IPR010239 Conserved hypothetical protein CHP02001 AMC99_RS03495 e36b5108e7325bfa9a332c7e3dd82c6d 441 PANTHER PTHR23513 8 405 2.9E-24 T 20-04-2016 AMC99_RS03495 e36b5108e7325bfa9a332c7e3dd82c6d 441 Pfam PF07690 Major Facilitator Superfamily 16 391 4.0E-14 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_RS03495 e36b5108e7325bfa9a332c7e3dd82c6d 441 Gene3D G3DSA:1.20.1250.20 9 193 7.8E-6 T 20-04-2016 AMC99_RS03495 e36b5108e7325bfa9a332c7e3dd82c6d 441 Gene3D G3DSA:1.20.1250.20 228 422 5.1E-6 T 20-04-2016 AMC99_RS03495 e36b5108e7325bfa9a332c7e3dd82c6d 441 PANTHER PTHR23513:SF8 8 405 2.9E-24 T 20-04-2016 AMC99_RS03495 e36b5108e7325bfa9a332c7e3dd82c6d 441 SUPERFAMILY SSF103473 9 427 4.45E-22 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS06205 f6134a12af820a05c59fb6aa4552e175 178 PANTHER PTHR10681 22 175 4.3E-21 T 20-04-2016 AMC99_RS06205 f6134a12af820a05c59fb6aa4552e175 178 Gene3D G3DSA:3.40.30.10 20 175 4.2E-29 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS06205 f6134a12af820a05c59fb6aa4552e175 178 SUPERFAMILY SSF52833 23 175 1.63E-27 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS06205 f6134a12af820a05c59fb6aa4552e175 178 Pfam PF00578 AhpC/TSA family 25 153 1.7E-20 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMC99_RS00635 01dd2c1bb8deebf682c106031e764206 404 Pfam PF13372 Alginate export 91 161 4.9E-7 T 20-04-2016 IPR025388 Alginate export domain UniPathway: UPA00286 AMC99_RS00635 01dd2c1bb8deebf682c106031e764206 404 Gene3D G3DSA:2.40.160.10 49 298 5.4E-7 T 20-04-2016 IPR023614 Porin domain AMC99_RS00410 06bed02e9f5f8545d505fd3434e74458 71 SUPERFAMILY SSF46955 18 69 1.19E-7 T 20-04-2016 IPR009061 Putative DNA-binding domain AMC99_RS00410 06bed02e9f5f8545d505fd3434e74458 71 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 17 66 9.2E-23 T 20-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) AMC99_RS00410 06bed02e9f5f8545d505fd3434e74458 71 PANTHER PTHR36154 17 70 4.7E-18 T 20-04-2016 AMC99_RS04005 dbd946792fcd005e469cda1417f8a998 257 SUPERFAMILY SSF53474 66 251 1.68E-23 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS04005 dbd946792fcd005e469cda1417f8a998 257 Gene3D G3DSA:3.40.50.1820 70 253 1.3E-21 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS04005 dbd946792fcd005e469cda1417f8a998 257 Pfam PF12697 Alpha/beta hydrolase family 88 185 8.2E-6 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS06425 0e4fb10bd0fe7d5b566aea0d34e521bd 141 Gene3D G3DSA:3.30.70.900 2 137 7.1E-44 T 20-04-2016 AMC99_RS06425 0e4fb10bd0fe7d5b566aea0d34e521bd 141 Pfam PF07045 Domain of unknown function (DUF1330) 51 124 1.3E-7 T 20-04-2016 IPR010753 Domain of unknown function DUF1330 AMC99_RS06425 0e4fb10bd0fe7d5b566aea0d34e521bd 141 PANTHER PTHR40257:SF2 9 131 1.3E-26 T 20-04-2016 AMC99_RS06425 0e4fb10bd0fe7d5b566aea0d34e521bd 141 SUPERFAMILY SSF54909 48 129 1.73E-17 T 20-04-2016 IPR011008 Dimeric alpha-beta barrel AMC99_RS06425 0e4fb10bd0fe7d5b566aea0d34e521bd 141 PANTHER PTHR40257 9 131 1.3E-26 T 20-04-2016 AMC99_RS09900 702c452363c3c6763e9c0758bde666d3 138 Pfam PF08570 Protein of unknown function (DUF1761) 7 132 8.4E-25 T 20-04-2016 IPR013879 Protein of unknown function DUF1761 AMC99_RS08010 a3478054d082e869327860b38ca331b3 230 SUPERFAMILY SSF51306 102 225 1.31E-22 T 20-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AMC99_RS08010 a3478054d082e869327860b38ca331b3 230 Gene3D G3DSA:2.10.109.10 103 226 1.1E-20 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMC99_RS08010 a3478054d082e869327860b38ca331b3 230 Pfam PF00717 Peptidase S24-like 148 212 7.0E-12 T 20-04-2016 IPR019759 Peptidase S24/S26A/S26B AMC99_RS08010 a3478054d082e869327860b38ca331b3 230 Gene3D G3DSA:1.10.260.40 10 68 1.7E-4 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS08010 a3478054d082e869327860b38ca331b3 230 PANTHER PTHR40661 25 225 5.1E-14 T 20-04-2016 AMC99_RS00680 e64de7e19229952774fbf2d8bde2bad3 86 PANTHER PTHR33359 29 86 6.2E-12 T 20-04-2016 AMC99_RS00680 e64de7e19229952774fbf2d8bde2bad3 86 Gene3D G3DSA:3.10.20.30 7 86 2.6E-12 T 20-04-2016 IPR012675 Beta-grasp domain AMC99_RS00680 e64de7e19229952774fbf2d8bde2bad3 86 Pfam PF02597 ThiS family 25 86 2.4E-12 T 20-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 AMC99_RS00680 e64de7e19229952774fbf2d8bde2bad3 86 SUPERFAMILY SSF54285 8 86 1.53E-12 T 20-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMC99_RS02090 42c3076892d3e85f99ecbdae8535a271 167 Pfam PF04386 Stringent starvation protein B 15 145 4.5E-47 T 20-04-2016 IPR007481 Stringent starvation protein B AMC99_RS02090 42c3076892d3e85f99ecbdae8535a271 167 Gene3D G3DSA:2.30.30.220 2 123 9.5E-52 T 20-04-2016 IPR007481 Stringent starvation protein B AMC99_RS02090 42c3076892d3e85f99ecbdae8535a271 167 SUPERFAMILY SSF101738 8 123 3.14E-41 T 20-04-2016 IPR007481 Stringent starvation protein B AMC99_RS07375 40f301a0219cecc4b5980986230ce623 274 Gene3D G3DSA:1.10.10.60 220 265 2.8E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS07375 40f301a0219cecc4b5980986230ce623 274 SUPERFAMILY SSF46689 218 266 9.86E-10 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS07375 40f301a0219cecc4b5980986230ce623 274 SMART SM00342 182 264 2.2E-18 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_RS07375 40f301a0219cecc4b5980986230ce623 274 Gene3D G3DSA:1.10.10.60 164 219 4.8E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS07375 40f301a0219cecc4b5980986230ce623 274 PANTHER PTHR11019:SF111 20 272 2.3E-65 T 20-04-2016 AMC99_RS07375 40f301a0219cecc4b5980986230ce623 274 Pfam PF02311 AraC-like ligand binding domain 20 106 3.5E-17 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMC99_RS07375 40f301a0219cecc4b5980986230ce623 274 Gene3D G3DSA:2.60.120.280 29 107 6.2E-11 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMC99_RS07375 40f301a0219cecc4b5980986230ce623 274 SUPERFAMILY SSF51215 29 127 3.79E-15 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMC99_RS07375 40f301a0219cecc4b5980986230ce623 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 219 260 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMC99_RS07375 40f301a0219cecc4b5980986230ce623 274 Pfam PF12833 Helix-turn-helix domain 190 265 3.3E-21 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_RS07375 40f301a0219cecc4b5980986230ce623 274 PANTHER PTHR11019 20 272 2.3E-65 T 20-04-2016 AMC99_RS10590 075eeb4382f1faa93b067d3b37824f46 326 Pfam PF05275 Copper resistance protein B precursor (CopB) 122 326 8.4E-82 T 20-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 AMC99_RS05355 871ad6069da31966fa9c740937fe3518 267 Pfam PF06724 Domain of Unknown Function (DUF1206) 14 78 2.1E-10 T 20-04-2016 IPR009597 Domain of unknown function DUF1206 AMC99_RS05355 871ad6069da31966fa9c740937fe3518 267 Pfam PF06724 Domain of Unknown Function (DUF1206) 94 163 1.3E-8 T 20-04-2016 IPR009597 Domain of unknown function DUF1206 AMC99_RS05355 871ad6069da31966fa9c740937fe3518 267 Pfam PF06724 Domain of Unknown Function (DUF1206) 184 251 1.0E-9 T 20-04-2016 IPR009597 Domain of unknown function DUF1206 AMC99_RS11390 607d4dac9067ef79c8856259af00ce17 134 Pfam PF01643 Acyl-ACP thioesterase 32 129 3.0E-12 T 20-04-2016 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 AMC99_RS11390 607d4dac9067ef79c8856259af00ce17 134 Gene3D G3DSA:3.10.129.10 7 131 2.4E-28 T 20-04-2016 IPR029069 HotDog domain AMC99_RS11390 607d4dac9067ef79c8856259af00ce17 134 SUPERFAMILY SSF54637 6 130 2.19E-34 T 20-04-2016 IPR029069 HotDog domain AMC99_RS11390 607d4dac9067ef79c8856259af00ce17 134 PANTHER PTHR31793 14 129 6.0E-13 T 20-04-2016 AMC99_RS12230 95cf52360ff194944b84f27d9ee62a78 123 Pfam PF03203 MerC mercury resistance protein 13 120 9.9E-23 T 20-04-2016 IPR004891 MerC mercury resistance protein AMC99_RS09220 17a9e76754b9b2ccc8787df7a093159e 278 Gene3D G3DSA:3.30.565.40 58 166 2.1E-8 T 20-04-2016 IPR025303 Domain of unknown function DUF4163 AMC99_RS09220 17a9e76754b9b2ccc8787df7a093159e 278 Pfam PF13739 Domain of unknown function (DUF4163) 79 151 1.5E-6 T 20-04-2016 IPR025303 Domain of unknown function DUF4163 AMC99_RS02930 ce6730dc495f96a6ff66e3f3edaeeb48 456 SUPERFAMILY SSF55931 310 452 5.2E-67 T 20-04-2016 AMC99_RS02930 ce6730dc495f96a6ff66e3f3edaeeb48 456 SUPERFAMILY SSF55931 28 271 5.2E-67 T 20-04-2016 AMC99_RS02930 ce6730dc495f96a6ff66e3f3edaeeb48 456 PIRSF PIRSF017901 1 455 6.5E-178 T 20-04-2016 AMC99_RS02930 ce6730dc495f96a6ff66e3f3edaeeb48 456 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 58 360 7.5E-96 T 20-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMC99_RS02930 ce6730dc495f96a6ff66e3f3edaeeb48 456 PANTHER PTHR34378:SF1 17 454 1.4E-225 T 20-04-2016 AMC99_RS02930 ce6730dc495f96a6ff66e3f3edaeeb48 456 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 14 453 3.5E-215 T 20-04-2016 IPR011556 Glutamate--cysteine ligase, plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 AMC99_RS02930 ce6730dc495f96a6ff66e3f3edaeeb48 456 PANTHER PTHR34378 17 454 1.4E-225 T 20-04-2016 AMC99_RS03020 45f7f05ae95ea816bd545a974d5cbef4 69 PIRSF PIRSF002599 1 69 1.1E-19 T 20-04-2016 IPR012156 Cold shock, CspA GO:0003676 AMC99_RS03020 45f7f05ae95ea816bd545a974d5cbef4 69 Gene3D G3DSA:2.40.50.140 1 67 5.6E-24 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS03020 45f7f05ae95ea816bd545a974d5cbef4 69 PRINTS PR00050 Cold shock protein signature 25 34 1.6E-10 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_RS03020 45f7f05ae95ea816bd545a974d5cbef4 69 PRINTS PR00050 Cold shock protein signature 40 58 1.6E-10 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_RS03020 45f7f05ae95ea816bd545a974d5cbef4 69 PRINTS PR00050 Cold shock protein signature 4 19 1.6E-10 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_RS03020 45f7f05ae95ea816bd545a974d5cbef4 69 SUPERFAMILY SSF50249 1 66 1.29E-19 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS03020 45f7f05ae95ea816bd545a974d5cbef4 69 SMART SM00357 3 68 1.1E-18 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 AMC99_RS03020 45f7f05ae95ea816bd545a974d5cbef4 69 PANTHER PTHR11544 1 69 6.0E-16 T 20-04-2016 AMC99_RS03020 45f7f05ae95ea816bd545a974d5cbef4 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 3.4E-21 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_RS02075 94421afe1e25174cadd33b9356968917 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 252 3.7E-43 T 20-04-2016 AMC99_RS02075 94421afe1e25174cadd33b9356968917 268 PANTHER PTHR24322 16 146 7.2E-45 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02075 94421afe1e25174cadd33b9356968917 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 2.8E-8 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02075 94421afe1e25174cadd33b9356968917 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 2.8E-8 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02075 94421afe1e25174cadd33b9356968917 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.8E-8 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02075 94421afe1e25174cadd33b9356968917 268 PANTHER PTHR24322:SF513 16 146 7.2E-45 T 20-04-2016 AMC99_RS02075 94421afe1e25174cadd33b9356968917 268 SUPERFAMILY SSF51735 10 252 1.61E-65 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02075 94421afe1e25174cadd33b9356968917 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 4.2E-28 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02075 94421afe1e25174cadd33b9356968917 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 4.2E-28 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02075 94421afe1e25174cadd33b9356968917 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 4.2E-28 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02075 94421afe1e25174cadd33b9356968917 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 4.2E-28 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02075 94421afe1e25174cadd33b9356968917 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 4.2E-28 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02075 94421afe1e25174cadd33b9356968917 268 PANTHER PTHR24322 163 197 7.2E-45 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_RS02075 94421afe1e25174cadd33b9356968917 268 Gene3D G3DSA:3.40.50.720 5 252 9.9E-71 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS02075 94421afe1e25174cadd33b9356968917 268 PANTHER PTHR24322:SF513 163 197 7.2E-45 T 20-04-2016 AMC99_RS05145 cfc1ac398b9860495239e0be5c70928d 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 3.0E-7 T 20-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMC99_RS05145 cfc1ac398b9860495239e0be5c70928d 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 3.0E-7 T 20-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMC99_RS05145 cfc1ac398b9860495239e0be5c70928d 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 3.0E-7 T 20-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMC99_RS05145 cfc1ac398b9860495239e0be5c70928d 256 Pfam PF01061 ABC-2 type transporter 10 219 2.2E-31 T 20-04-2016 IPR013525 ABC-2 type transporter GO:0016020 AMC99_RS05145 cfc1ac398b9860495239e0be5c70928d 256 PIRSF PIRSF006648 2 253 1.6E-31 T 20-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMC99_RS05145 cfc1ac398b9860495239e0be5c70928d 256 PANTHER PTHR30413 5 256 5.4E-94 T 20-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMC99_RS05145 cfc1ac398b9860495239e0be5c70928d 256 PANTHER PTHR30413:SF5 5 256 5.4E-94 T 20-04-2016 AMC99_RS00390 715a6172343e5e439574a91ab26e3d07 189 Pfam PF05309 TraE protein 1 179 1.7E-55 T 20-04-2016 IPR007973 Pilus assembly TraE GO:0000746 AMC99_RS11320 2d37361be2892ef9ef2cadaded1f8908 261 PANTHER PTHR24220 11 229 3.1E-101 T 20-04-2016 AMC99_RS11320 2d37361be2892ef9ef2cadaded1f8908 261 Gene3D G3DSA:3.40.50.300 6 240 2.5E-77 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11320 2d37361be2892ef9ef2cadaded1f8908 261 Pfam PF00005 ABC transporter 27 168 1.3E-34 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_RS11320 2d37361be2892ef9ef2cadaded1f8908 261 PANTHER PTHR24220:SF434 11 229 3.1E-101 T 20-04-2016 AMC99_RS11320 2d37361be2892ef9ef2cadaded1f8908 261 SUPERFAMILY SSF52540 9 241 2.38E-72 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS11320 2d37361be2892ef9ef2cadaded1f8908 261 SMART SM00382 34 218 1.3E-17 T 20-04-2016 IPR003593 AAA+ ATPase domain AMC99_RS11320 2d37361be2892ef9ef2cadaded1f8908 261 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_RS04310 ecb01b83f8d853f982bc7d1db88c3ce9 144 Gene3D G3DSA:1.20.120.550 10 142 1.7E-6 T 20-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AMC99_RS04310 ecb01b83f8d853f982bc7d1db88c3ce9 144 SUPERFAMILY SSF161084 5 135 6.08E-20 T 20-04-2016 AMC99_RS04310 ecb01b83f8d853f982bc7d1db88c3ce9 144 Pfam PF01124 MAPEG family 8 137 6.4E-24 T 20-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AMC99_RS12555 2de129355cf69aa2efd281903536c23b 92 Gene3D G3DSA:3.30.1200.10 22 91 4.0E-20 T 20-04-2016 IPR003746 Protein of unknown function DUF167 AMC99_RS12555 2de129355cf69aa2efd281903536c23b 92 SMART SM01152 20 92 4.6E-17 T 20-04-2016 IPR003746 Protein of unknown function DUF167 AMC99_RS12555 2de129355cf69aa2efd281903536c23b 92 Hamap MF_00634 UPF0235 protein YggU [yggU]. 19 92 13.061 T 20-04-2016 IPR003746 Protein of unknown function DUF167 AMC99_RS12555 2de129355cf69aa2efd281903536c23b 92 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 23 90 3.5E-20 T 20-04-2016 IPR003746 Protein of unknown function DUF167 AMC99_RS12555 2de129355cf69aa2efd281903536c23b 92 SUPERFAMILY SSF69786 21 91 2.75E-18 T 20-04-2016 IPR003746 Protein of unknown function DUF167 AMC99_RS00905 b57352bee798e937ea59eee6a8cf7323 365 SUPERFAMILY SSF53756 1 354 1.36E-119 T 20-04-2016 AMC99_RS00905 b57352bee798e937ea59eee6a8cf7323 365 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 7 352 5.8E-119 T 20-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain AMC99_RS00905 b57352bee798e937ea59eee6a8cf7323 365 Gene3D G3DSA:3.40.50.2000 1 193 1.2E-68 T 20-04-2016 AMC99_RS00905 b57352bee798e937ea59eee6a8cf7323 365 Gene3D G3DSA:3.40.50.2000 194 354 1.7E-60 T 20-04-2016 AMC99_RS00905 b57352bee798e937ea59eee6a8cf7323 365 PANTHER PTHR18964 1 354 9.2E-151 T 20-04-2016 AMC99_RS00905 b57352bee798e937ea59eee6a8cf7323 365 PANTHER PTHR18964:SF2 1 354 9.2E-151 T 20-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 AMC99_RS00905 b57352bee798e937ea59eee6a8cf7323 365 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 354 5.0E-131 T 20-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 AMC99_RS10880 135a8e6282cb96952ebd5f7a8cbe9a21 286 SUPERFAMILY SSF53335 66 250 5.63E-14 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10880 135a8e6282cb96952ebd5f7a8cbe9a21 286 PIRSF PIRSF031679 1 286 9.9E-64 T 20-04-2016 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted AMC99_RS10880 135a8e6282cb96952ebd5f7a8cbe9a21 286 Gene3D G3DSA:3.40.50.150 50 251 5.3E-10 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS03450 77c6c7d1d968f194167def222702ab52 641 PANTHER PTHR30540 24 567 1.4E-219 T 20-04-2016 AMC99_RS03450 77c6c7d1d968f194167def222702ab52 641 PANTHER PTHR30540:SF7 24 567 1.4E-219 T 20-04-2016 AMC99_RS03450 77c6c7d1d968f194167def222702ab52 641 Pfam PF02705 K+ potassium transporter 28 563 4.7E-202 T 20-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AMC99_RS03450 77c6c7d1d968f194167def222702ab52 641 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 19 641 33.312 T 20-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup AMC99_RS05190 3b24b363e96755560666c720daa7fa3e 158 PANTHER PTHR30455:SF2 2 156 8.5E-61 T 20-04-2016 AMC99_RS05190 3b24b363e96755560666c720daa7fa3e 158 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 142 1.5E-51 T 20-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AMC99_RS05190 3b24b363e96755560666c720daa7fa3e 158 PANTHER PTHR30455 2 156 8.5E-61 T 20-04-2016 AMC99_RS05190 3b24b363e96755560666c720daa7fa3e 158 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 80.01 T 20-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AMC99_RS05190 3b24b363e96755560666c720daa7fa3e 158 Pfam PF03477 ATP cone domain 50 135 3.4E-15 T 20-04-2016 IPR005144 ATP-cone domain AMC99_RS03735 273561c25ef642d02c2508c4aab681a0 135 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 4 135 1.1E-33 T 20-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- AMC99_RS03735 273561c25ef642d02c2508c4aab681a0 135 SUPERFAMILY SSF52799 6 105 1.62E-6 T 20-04-2016 IPR029021 Protein-tyrosine phosphatase-like AMC99_RS03735 273561c25ef642d02c2508c4aab681a0 135 Gene3D G3DSA:3.90.190.10 1 135 3.3E-42 T 20-04-2016 IPR029021 Protein-tyrosine phosphatase-like AMC99_RS03735 273561c25ef642d02c2508c4aab681a0 135 Pfam PF04273 Putative phosphatase (DUF442) 4 108 6.5E-31 T 20-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- AMC99_RS06525 026213f3bbc1a14bf79a23cb47934c9d 157 PANTHER PTHR11839:SF13 5 153 1.1E-35 T 20-04-2016 AMC99_RS06525 026213f3bbc1a14bf79a23cb47934c9d 157 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 20-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMC99_RS06525 026213f3bbc1a14bf79a23cb47934c9d 157 PRINTS PR00502 NUDIX hydrolase family signature 35 49 3.8E-8 T 20-04-2016 IPR020476 NUDIX hydrolase AMC99_RS06525 026213f3bbc1a14bf79a23cb47934c9d 157 PRINTS PR00502 NUDIX hydrolase family signature 49 64 3.8E-8 T 20-04-2016 IPR020476 NUDIX hydrolase AMC99_RS06525 026213f3bbc1a14bf79a23cb47934c9d 157 Pfam PF00293 NUDIX domain 6 148 5.3E-28 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMC99_RS06525 026213f3bbc1a14bf79a23cb47934c9d 157 PANTHER PTHR11839 5 153 1.1E-35 T 20-04-2016 AMC99_RS06525 026213f3bbc1a14bf79a23cb47934c9d 157 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 157 31.724 T 20-04-2016 IPR022927 RNA pyrophosphohydrolase RppH AMC99_RS06525 026213f3bbc1a14bf79a23cb47934c9d 157 Gene3D G3DSA:3.90.79.10 4 153 3.2E-35 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS06525 026213f3bbc1a14bf79a23cb47934c9d 157 SUPERFAMILY SSF55811 5 155 4.2E-33 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMC99_RS07725 865f956ac31c6edd09d66b94cb7082c0 424 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 82 238 9.1E-12 T 20-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 AMC99_RS07725 865f956ac31c6edd09d66b94cb7082c0 424 Pfam PF16192 C-terminal four TMM region of protein-O-mannosyltransferase 252 423 1.1E-17 T 20-04-2016 IPR032421 Protein O-mannosyl-transferase, C-terminal four TM domain KEGG: 00500+2.4.1.10|KEGG: 00514+2.4.1.109|MetaCyc: PWY-822|UniPathway: UPA00378 AMC99_RS07725 865f956ac31c6edd09d66b94cb7082c0 424 PANTHER PTHR10050 29 237 4.3E-14 T 20-04-2016 IPR027005 Glycosyltransferase 39-like AMC99_RS10440 d92306869695e67264de005d5d41740f 146 Pfam PF03692 Putative zinc- or iron-chelating domain 25 93 3.8E-7 T 20-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein AMC99_RS10440 d92306869695e67264de005d5d41740f 146 PANTHER PTHR37421:SF1 2 146 1.9E-49 T 20-04-2016 AMC99_RS10440 d92306869695e67264de005d5d41740f 146 PIRSF PIRSF006173 1 146 1.2E-57 T 20-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 AMC99_RS10440 d92306869695e67264de005d5d41740f 146 PANTHER PTHR37421 2 146 1.9E-49 T 20-04-2016 AMC99_RS04065 cf15789f5fe41f388d860bbada802afa 211 Pfam PF07811 TadE-like protein 18 59 1.9E-6 T 20-04-2016 IPR012495 TadE-like AMC99_RS12040 ec8fbae9599247f909f0c072dc347630 327 Gene3D G3DSA:2.30.42.10 82 125 1.6E-4 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS12040 ec8fbae9599247f909f0c072dc347630 327 SUPERFAMILY SSF50156 86 150 5.05E-5 T 20-04-2016 IPR001478 PDZ domain GO:0005515 AMC99_RS10055 704004abbeffb460061e979deb45d688 114 SUPERFAMILY SSF52833 4 114 1.01E-25 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS10055 704004abbeffb460061e979deb45d688 114 PANTHER PTHR30041 1 114 2.8E-22 T 20-04-2016 AMC99_RS10055 704004abbeffb460061e979deb45d688 114 Pfam PF03960 ArsC family 70 113 1.0E-10 T 20-04-2016 IPR006660 Arsenate reductase-like AMC99_RS10055 704004abbeffb460061e979deb45d688 114 Gene3D G3DSA:3.40.30.10 1 114 4.6E-38 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS05380 71d90f699bce3af54e7e79703ecb8fc6 293 PANTHER PTHR40590 42 292 1.2E-25 T 20-04-2016 AMC99_RS05380 71d90f699bce3af54e7e79703ecb8fc6 293 Pfam PF01963 TraB family 35 291 1.1E-49 T 20-04-2016 IPR002816 Pheromone shutdown, TraB AMC99_RS05930 45cf0b581746dce3a8cbea43dec073c4 158 Pfam PF00011 Hsp20/alpha crystallin family 43 139 3.7E-16 T 20-04-2016 IPR002068 Alpha crystallin/Hsp20 domain AMC99_RS05930 45cf0b581746dce3a8cbea43dec073c4 158 PANTHER PTHR11527:SF145 5 146 1.6E-50 T 20-04-2016 AMC99_RS05930 45cf0b581746dce3a8cbea43dec073c4 158 Gene3D G3DSA:2.60.40.790 3 139 6.2E-17 T 20-04-2016 IPR008978 HSP20-like chaperone AMC99_RS05930 45cf0b581746dce3a8cbea43dec073c4 158 SUPERFAMILY SSF49764 8 140 2.79E-20 T 20-04-2016 IPR008978 HSP20-like chaperone AMC99_RS05930 45cf0b581746dce3a8cbea43dec073c4 158 PANTHER PTHR11527 5 146 1.6E-50 T 20-04-2016 IPR031107 Small heat shock protein HSP20 AMC99_RS11485 087ebd29b9abd92d5856e1b99eafef87 305 SUPERFAMILY SSF117892 115 240 8.76E-10 T 20-04-2016 IPR001107 Band 7 domain AMC99_RS11485 087ebd29b9abd92d5856e1b99eafef87 305 PANTHER PTHR10264:SF46 265 280 8.1E-61 T 20-04-2016 AMC99_RS11485 087ebd29b9abd92d5856e1b99eafef87 305 PANTHER PTHR10264:SF46 4 242 8.1E-61 T 20-04-2016 AMC99_RS11485 087ebd29b9abd92d5856e1b99eafef87 305 SMART SM00244 72 237 2.3E-9 T 20-04-2016 IPR001107 Band 7 domain AMC99_RS11485 087ebd29b9abd92d5856e1b99eafef87 305 PANTHER PTHR10264 265 280 8.1E-61 T 20-04-2016 IPR001972 Stomatin family GO:0016020 AMC99_RS11485 087ebd29b9abd92d5856e1b99eafef87 305 PANTHER PTHR10264 4 242 8.1E-61 T 20-04-2016 IPR001972 Stomatin family GO:0016020 AMC99_RS11485 087ebd29b9abd92d5856e1b99eafef87 305 Pfam PF01145 SPFH domain / Band 7 family 75 248 9.9E-23 T 20-04-2016 IPR001107 Band 7 domain AMC99_RS11475 2c12ae359b3aa312468e6c70041fad68 327 SUPERFAMILY SSF51126 50 316 1.02E-31 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor AMC99_RS11475 2c12ae359b3aa312468e6c70041fad68 327 Gene3D G3DSA:2.160.20.10 32 289 1.8E-17 T 20-04-2016 IPR012334 Pectin lyase fold AMC99_RS11980 966c881ba5fb0b878474e4caae693d21 516 PIRSF PIRSF011396 1 506 2.1E-150 T 20-04-2016 IPR006905 Tryptophan halogenase AMC99_RS11980 966c881ba5fb0b878474e4caae693d21 516 Gene3D G3DSA:3.50.50.60 6 73 1.0E-47 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11980 966c881ba5fb0b878474e4caae693d21 516 Gene3D G3DSA:3.50.50.60 152 232 1.0E-47 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11980 966c881ba5fb0b878474e4caae693d21 516 Gene3D G3DSA:3.50.50.60 322 366 1.0E-47 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11980 966c881ba5fb0b878474e4caae693d21 516 Pfam PF04820 Tryptophan halogenase 9 459 7.3E-121 T 20-04-2016 IPR006905 Tryptophan halogenase AMC99_RS11980 966c881ba5fb0b878474e4caae693d21 516 SUPERFAMILY SSF51905 327 429 2.27E-31 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11980 966c881ba5fb0b878474e4caae693d21 516 SUPERFAMILY SSF51905 137 234 2.27E-31 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11980 966c881ba5fb0b878474e4caae693d21 516 SUPERFAMILY SSF51905 7 88 2.27E-31 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS06265 5df2f4027ca2b38242e79660c5f36404 151 SUPERFAMILY SSF54637 16 141 3.47E-19 T 20-04-2016 IPR029069 HotDog domain AMC99_RS06265 5df2f4027ca2b38242e79660c5f36404 151 Pfam PF03061 Thioesterase superfamily 61 139 8.2E-8 T 20-04-2016 IPR006683 Thioesterase domain AMC99_RS06265 5df2f4027ca2b38242e79660c5f36404 151 Gene3D G3DSA:3.10.129.10 12 150 1.3E-26 T 20-04-2016 IPR029069 HotDog domain AMC99_RS13070 64db46a84c653bd853dc62eebc590dcf 124 PANTHER PTHR30558:SF3 1 124 3.2E-16 T 20-04-2016 AMC99_RS13070 64db46a84c653bd853dc62eebc590dcf 124 Pfam PF02472 Biopolymer transport protein ExbD/TolR 1 114 1.2E-15 T 20-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AMC99_RS13070 64db46a84c653bd853dc62eebc590dcf 124 PANTHER PTHR30558 1 124 3.2E-16 T 20-04-2016 AMC99_RS12420 d78e61decc18c825a4b20a025a387784 529 PIRSF PIRSF500060 7 525 2.9E-203 T 20-04-2016 IPR027283 Glutamate synthase large subunit-like protein, bacteria AMC99_RS12420 d78e61decc18c825a4b20a025a387784 529 PIRSF PIRSF006429 12 525 9.7E-144 T 20-04-2016 IPR024188 Glutamate synthase large subunit-like protein AMC99_RS12420 d78e61decc18c825a4b20a025a387784 529 PANTHER PTHR11938 155 485 1.5E-79 T 20-04-2016 AMC99_RS12420 d78e61decc18c825a4b20a025a387784 529 SUPERFAMILY SSF51395 19 495 2.93E-122 T 20-04-2016 AMC99_RS12420 d78e61decc18c825a4b20a025a387784 529 PANTHER PTHR11938:SF50 155 485 1.5E-79 T 20-04-2016 AMC99_RS12420 d78e61decc18c825a4b20a025a387784 529 Gene3D G3DSA:3.20.20.70 45 487 3.6E-112 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS12420 d78e61decc18c825a4b20a025a387784 529 Pfam PF01645 Conserved region in glutamate synthase 153 469 4.5E-82 T 20-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AMC99_RS12505 fb4893963b53b85850c53cb7c8be878f 283 PANTHER PTHR39200:SF1 5 247 5.8E-15 T 20-04-2016 AMC99_RS12505 fb4893963b53b85850c53cb7c8be878f 283 PANTHER PTHR39200 5 247 5.8E-15 T 20-04-2016 AMC99_RS12505 fb4893963b53b85850c53cb7c8be878f 283 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 52 227 1.1E-31 T 20-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain AMC99_RS12505 fb4893963b53b85850c53cb7c8be878f 283 Gene3D G3DSA:2.160.20.20 56 261 1.8E-4 T 20-04-2016 IPR012332 P22 tailspike C-terminal domain-like AMC99_RS13065 aa5577a6d5eeee4a0ba3447de7adf801 138 Pfam PF02472 Biopolymer transport protein ExbD/TolR 1 104 1.4E-6 T 20-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AMC99_RS13460 b9cb4718c4d4695dc47329a538de4f79 141 Pfam PF02656 Domain of unknown function (DUF202) 31 94 9.0E-13 T 20-04-2016 IPR003807 Domain of unknown function DUF202 AMC99_RS03980 c792a41da7902cd874baed5756a31a70 404 PANTHER PTHR13789 6 394 1.5E-92 T 20-04-2016 AMC99_RS03980 c792a41da7902cd874baed5756a31a70 404 Gene3D G3DSA:3.50.50.60 271 359 1.4E-40 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03980 c792a41da7902cd874baed5756a31a70 404 Gene3D G3DSA:3.50.50.60 6 180 1.4E-40 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03980 c792a41da7902cd874baed5756a31a70 404 PANTHER PTHR13789:SF214 6 394 1.5E-92 T 20-04-2016 AMC99_RS03980 c792a41da7902cd874baed5756a31a70 404 Pfam PF01494 FAD binding domain 6 342 1.3E-27 T 20-04-2016 IPR002938 FAD-binding domain GO:0071949 AMC99_RS03980 c792a41da7902cd874baed5756a31a70 404 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 297 310 - T 20-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 AMC99_RS03980 c792a41da7902cd874baed5756a31a70 404 SUPERFAMILY SSF51905 270 388 5.24E-51 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03980 c792a41da7902cd874baed5756a31a70 404 SUPERFAMILY SSF51905 6 175 5.24E-51 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03980 c792a41da7902cd874baed5756a31a70 404 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 392 3.6E-117 T 20-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 AMC99_RS03980 c792a41da7902cd874baed5756a31a70 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 4.8E-17 T 20-04-2016 AMC99_RS03980 c792a41da7902cd874baed5756a31a70 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 4.8E-17 T 20-04-2016 AMC99_RS03980 c792a41da7902cd874baed5756a31a70 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 4.8E-17 T 20-04-2016 AMC99_RS03980 c792a41da7902cd874baed5756a31a70 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 4.8E-17 T 20-04-2016 AMC99_RS06980 787957bcf2e1a8902147e19f87b160ac 75 PANTHER PTHR10031 4 75 5.4E-13 T 20-04-2016 AMC99_RS06980 787957bcf2e1a8902147e19f87b160ac 75 Pfam PF00137 ATP synthase subunit C 10 71 1.8E-9 T 20-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMC99_RS06980 787957bcf2e1a8902147e19f87b160ac 75 PRINTS PR00124 ATP synthase C subunit signature 30 45 1.3E-16 T 20-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMC99_RS06980 787957bcf2e1a8902147e19f87b160ac 75 PRINTS PR00124 ATP synthase C subunit signature 9 28 1.3E-16 T 20-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMC99_RS06980 787957bcf2e1a8902147e19f87b160ac 75 PRINTS PR00124 ATP synthase C subunit signature 47 72 1.3E-16 T 20-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMC99_RS06980 787957bcf2e1a8902147e19f87b160ac 75 SUPERFAMILY SSF81333 5 73 1.96E-14 T 20-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMC99_RS06980 787957bcf2e1a8902147e19f87b160ac 75 Gene3D G3DSA:1.20.20.10 6 73 4.2E-17 T 20-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMC99_RS06980 787957bcf2e1a8902147e19f87b160ac 75 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 74 12.91 T 20-04-2016 AMC99_RS07165 0e11566bd70afc832c73dc908a7a9457 178 PANTHER PTHR40547 1 172 1.4E-13 T 20-04-2016 AMC99_RS07165 0e11566bd70afc832c73dc908a7a9457 178 PANTHER PTHR40547:SF1 1 172 1.4E-13 T 20-04-2016 AMC99_RS07165 0e11566bd70afc832c73dc908a7a9457 178 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 15 158 2.6E-32 T 20-04-2016 IPR018639 Domain of unknown function DUF2062 AMC99_RS05460 09f8934f1e4930fd913f603d121a68cd 101 Pfam PF07238 PilZ domain 2 78 1.1E-8 T 20-04-2016 IPR009875 PilZ domain GO:0035438 AMC99_RS05460 09f8934f1e4930fd913f603d121a68cd 101 SUPERFAMILY SSF141371 2 94 7.06E-14 T 20-04-2016 AMC99_RS09255 e744689cf0e3d6449b7b55a16ea8bb6b 353 Gene3D G3DSA:3.40.50.1820 95 340 1.5E-37 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS09255 e744689cf0e3d6449b7b55a16ea8bb6b 353 Pfam PF00326 Prolyl oligopeptidase family 152 340 1.7E-19 T 20-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMC99_RS09255 e744689cf0e3d6449b7b55a16ea8bb6b 353 SUPERFAMILY SSF53474 100 340 1.07E-37 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS09255 e744689cf0e3d6449b7b55a16ea8bb6b 353 PANTHER PTHR11731 98 353 2.4E-20 T 20-04-2016 AMC99_RS04785 3fb910a2eabcf898dc587d57d0812cf4 142 SUPERFAMILY SSF54427 3 118 2.72E-10 T 20-04-2016 IPR032710 NTF2-like domain AMC99_RS04785 3fb910a2eabcf898dc587d57d0812cf4 142 Gene3D G3DSA:3.10.450.50 3 122 1.6E-12 T 20-04-2016 IPR032710 NTF2-like domain AMC99_RS04785 3fb910a2eabcf898dc587d57d0812cf4 142 Pfam PF14534 Domain of unknown function (DUF4440) 8 117 2.7E-9 T 20-04-2016 IPR027843 Domain of unknown function DUF4440 AMC99_RS05960 df16e054d6f23f0f96c07ee5f1afd192 282 Pfam PF09992 Phosphodiester glycosidase 110 256 3.7E-17 T 20-04-2016 IPR018711 Phosphodiester glycosidase AMC99_RS02140 4ae1299caa2dd37f4672d5176f19aa77 158 PANTHER PTHR30558:SF7 1 150 4.9E-39 T 20-04-2016 AMC99_RS02140 4ae1299caa2dd37f4672d5176f19aa77 158 PANTHER PTHR30558 1 150 4.9E-39 T 20-04-2016 AMC99_RS02140 4ae1299caa2dd37f4672d5176f19aa77 158 Pfam PF02472 Biopolymer transport protein ExbD/TolR 18 142 2.1E-28 T 20-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AMC99_RS10785 2f015ea711aa328ee8ebe199dbec089e 163 Gene3D G3DSA:1.20.910.10 7 157 1.5E-18 T 20-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 AMC99_RS10785 2f015ea711aa328ee8ebe199dbec089e 163 SUPERFAMILY SSF48613 9 158 8.9E-17 T 20-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 AMC99_RS12035 def54b323e70924c2049fd95327597fd 230 PANTHER PTHR13887:SF25 75 228 7.2E-39 T 20-04-2016 AMC99_RS12035 def54b323e70924c2049fd95327597fd 230 PANTHER PTHR13887 75 228 7.2E-39 T 20-04-2016 AMC99_RS12035 def54b323e70924c2049fd95327597fd 230 SUPERFAMILY SSF52833 68 226 5.49E-35 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS12035 def54b323e70924c2049fd95327597fd 230 Gene3D G3DSA:3.40.30.10 73 228 2.3E-35 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS12035 def54b323e70924c2049fd95327597fd 230 Pfam PF13462 Thioredoxin 74 226 1.4E-18 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS04690 f5e9fe879c1208a28136b5c24ac95146 92 Pfam PF03937 Flavinator of succinate dehydrogenase 12 76 9.8E-21 T 20-04-2016 IPR005631 Flavinator of succinate dehydrogenase AMC99_RS04690 f5e9fe879c1208a28136b5c24ac95146 92 Gene3D G3DSA:1.10.150.250 9 85 1.9E-21 T 20-04-2016 IPR005631 Flavinator of succinate dehydrogenase AMC99_RS04690 f5e9fe879c1208a28136b5c24ac95146 92 SUPERFAMILY SSF109910 8 84 4.18E-21 T 20-04-2016 IPR005631 Flavinator of succinate dehydrogenase AMC99_RS12410 ab9bd6803e4d008071f1b1cb717c4dac 150 SUPERFAMILY SSF54975 2 111 3.6E-28 T 20-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AMC99_RS12410 ab9bd6803e4d008071f1b1cb717c4dac 150 Pfam PF04940 Sensors of blue-light using FAD 1 92 3.4E-24 T 20-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 AMC99_RS12410 ab9bd6803e4d008071f1b1cb717c4dac 150 SMART SM01034 1 93 1.6E-27 T 20-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 AMC99_RS12025 bea9ffad3025df19bbfd811f2876256d 311 SUPERFAMILY SSF53474 48 274 9.26E-57 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS12025 bea9ffad3025df19bbfd811f2876256d 311 Gene3D G3DSA:3.40.50.1820 50 296 3.8E-63 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS12025 bea9ffad3025df19bbfd811f2876256d 311 Pfam PF00135 Carboxylesterase family 74 173 3.5E-21 T 20-04-2016 IPR002018 Carboxylesterase, type B AMC99_RS12025 bea9ffad3025df19bbfd811f2876256d 311 PANTHER PTHR23024 56 299 1.7E-48 T 20-04-2016 AMC99_RS00460 ce71361af6310a0d6f8b0e29b1e88b9d 401 Pfam PF05275 Copper resistance protein B precursor (CopB) 199 401 4.4E-86 T 20-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 AMC99_RS00475 2e0a90ce5ce29ab49b88650273fc98a6 142 Pfam PF13801 Heavy-metal resistance 6 127 3.9E-13 T 20-04-2016 IPR025961 Heavy-metal resistance protein AMC99_RS09005 0be3b6304ae6f97d98e76fd4fe85f10e 98 Pfam PF11011 Protein of unknown function (DUF2849) 2 83 7.4E-21 T 20-04-2016 IPR021270 Protein of unknown function DUF2849 AMC99_RS02875 8d08a4784312c43c05864c0c62392f9e 300 PANTHER PTHR22911 10 300 7.1E-105 T 20-04-2016 AMC99_RS02875 8d08a4784312c43c05864c0c62392f9e 300 TIGRFAM TIGR00688 rarD: protein RarD 12 263 1.2E-56 T 20-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 AMC99_RS02875 8d08a4784312c43c05864c0c62392f9e 300 Pfam PF00892 EamA-like transporter family 11 147 2.1E-14 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_RS02875 8d08a4784312c43c05864c0c62392f9e 300 SUPERFAMILY SSF103481 211 288 3.4E-6 T 20-04-2016 AMC99_RS02875 8d08a4784312c43c05864c0c62392f9e 300 PANTHER PTHR22911:SF41 10 300 7.1E-105 T 20-04-2016 AMC99_RS02875 8d08a4784312c43c05864c0c62392f9e 300 SUPERFAMILY SSF103481 44 148 7.45E-12 T 20-04-2016 AMC99_RS03620 5d876a0280bc032ed01209d0cbf52a77 229 Pfam PF07750 GcrA cell cycle regulator 157 209 7.3E-16 T 20-04-2016 IPR011681 GcrA cell cycle regulator AMC99_RS03620 5d876a0280bc032ed01209d0cbf52a77 229 Pfam PF07750 GcrA cell cycle regulator 1 89 8.8E-24 T 20-04-2016 IPR011681 GcrA cell cycle regulator AMC99_RS04480 14b1dbebfe28e9d6f3ae211779238334 262 PANTHER PTHR11941:SF76 3 259 1.6E-85 T 20-04-2016 AMC99_RS04480 14b1dbebfe28e9d6f3ae211779238334 262 SUPERFAMILY SSF52096 2 261 3.98E-77 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS04480 14b1dbebfe28e9d6f3ae211779238334 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 261 5.2E-58 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMC99_RS04480 14b1dbebfe28e9d6f3ae211779238334 262 Gene3D G3DSA:3.90.226.10 2 260 2.1E-78 T 20-04-2016 IPR029045 ClpP/crotonase-like domain AMC99_RS04480 14b1dbebfe28e9d6f3ae211779238334 262 PANTHER PTHR11941 3 259 1.6E-85 T 20-04-2016 AMC99_RS00055 cb349c52d38b231d63034867a7760644 224 Pfam PF13560 Helix-turn-helix domain 129 189 1.2E-12 T 20-04-2016 AMC99_RS00055 cb349c52d38b231d63034867a7760644 224 SMART SM00530 132 187 7.4E-11 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_RS00055 cb349c52d38b231d63034867a7760644 224 Pfam PF07238 PilZ domain 23 94 1.1E-8 T 20-04-2016 IPR009875 PilZ domain GO:0035438 AMC99_RS00055 cb349c52d38b231d63034867a7760644 224 Gene3D G3DSA:1.10.260.40 129 187 2.1E-16 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS00055 cb349c52d38b231d63034867a7760644 224 SUPERFAMILY SSF141371 24 94 4.32E-6 T 20-04-2016 AMC99_RS00055 cb349c52d38b231d63034867a7760644 224 SUPERFAMILY SSF47413 127 193 1.31E-13 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMC99_RS05830 42b65e7606b51690ca1f79ce1cc2b802 437 Gene3D G3DSA:1.25.40.10 356 413 6.3E-7 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS05830 42b65e7606b51690ca1f79ce1cc2b802 437 Gene3D G3DSA:1.25.40.10 173 205 1.0E-4 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS05830 42b65e7606b51690ca1f79ce1cc2b802 437 SUPERFAMILY SSF48452 148 209 8.04E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS05830 42b65e7606b51690ca1f79ce1cc2b802 437 SUPERFAMILY SSF48452 350 412 8.04E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS04870 3cd8fd43eeb412010534011adbb65b37 461 PANTHER PTHR30576 56 461 3.1E-112 T 20-04-2016 AMC99_RS04870 3cd8fd43eeb412010534011adbb65b37 461 PANTHER PTHR30576:SF0 56 461 3.1E-112 T 20-04-2016 AMC99_RS04870 3cd8fd43eeb412010534011adbb65b37 461 Pfam PF13727 CoA-binding domain 67 211 3.6E-11 T 20-04-2016 AMC99_RS04870 3cd8fd43eeb412010534011adbb65b37 461 TIGRFAM TIGR03013 EpsB_2: sugar transferase, PEP-CTERM system associated 53 461 1.3E-151 T 20-04-2016 IPR017464 Sugar transferase, PEP-CTERM system associated AMC99_RS04870 3cd8fd43eeb412010534011adbb65b37 461 Pfam PF02397 Bacterial sugar transferase 273 455 4.6E-56 T 20-04-2016 IPR003362 Bacterial sugar transferase AMC99_RS04870 3cd8fd43eeb412010534011adbb65b37 461 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 19 461 2.1E-124 T 20-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMC99_RS12860 e7dfffbcda5549cf7b7d1e8cc8511919 212 Pfam PF04542 Sigma-70 region 2 38 94 1.8E-6 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS12860 e7dfffbcda5549cf7b7d1e8cc8511919 212 Gene3D G3DSA:1.10.1740.10 31 93 2.0E-4 T 20-04-2016 AMC99_RS12860 e7dfffbcda5549cf7b7d1e8cc8511919 212 SUPERFAMILY SSF88946 31 105 6.54E-7 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_RS12740 5008829db3e1a93393a9d729000f3783 337 SUPERFAMILY SSF52540 1 77 1.31E-11 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12740 5008829db3e1a93393a9d729000f3783 337 SUPERFAMILY SSF52540 104 258 1.31E-11 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12740 5008829db3e1a93393a9d729000f3783 337 Gene3D G3DSA:3.40.50.300 8 29 3.9E-7 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12740 5008829db3e1a93393a9d729000f3783 337 Gene3D G3DSA:3.40.50.300 118 238 3.9E-7 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12740 5008829db3e1a93393a9d729000f3783 337 Pfam PF00685 Sulfotransferase domain 11 258 2.3E-5 T 20-04-2016 IPR000863 Sulfotransferase domain GO:0008146 AMC99_RS11565 c6528611590184f1a1ffe44e3feb39a1 207 Pfam PF13548 Domain of unknown function (DUF4126) 9 180 4.2E-48 T 20-04-2016 IPR025196 Domain of unknown function DUF4126 AMC99_RS07045 e66f1bc9313c43403d88009f680e721b 259 SUPERFAMILY SSF51366 1 248 5.56E-80 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMC99_RS07045 e66f1bc9313c43403d88009f680e721b 259 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 12 248 1.1E-71 T 20-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMC99_RS07045 e66f1bc9313c43403d88009f680e721b 259 PANTHER PTHR10314:SF4 19 44 3.2E-16 T 20-04-2016 AMC99_RS07045 e66f1bc9313c43403d88009f680e721b 259 PANTHER PTHR10314:SF4 67 124 3.2E-16 T 20-04-2016 AMC99_RS07045 e66f1bc9313c43403d88009f680e721b 259 Pfam PF00290 Tryptophan synthase alpha chain 8 252 1.2E-86 T 20-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMC99_RS07045 e66f1bc9313c43403d88009f680e721b 259 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 41 54 - T 20-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMC99_RS07045 e66f1bc9313c43403d88009f680e721b 259 Gene3D G3DSA:3.20.20.70 2 256 4.3E-90 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS07045 e66f1bc9313c43403d88009f680e721b 259 PANTHER PTHR10314 19 44 3.2E-16 T 20-04-2016 AMC99_RS07045 e66f1bc9313c43403d88009f680e721b 259 PANTHER PTHR10314 67 124 3.2E-16 T 20-04-2016 AMC99_RS07045 e66f1bc9313c43403d88009f680e721b 259 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 10 254 33.749 T 20-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMC99_RS12465 f79cd52f020bcce61eed86abbf2da081 271 SUPERFAMILY SSF49354 22 164 2.38E-7 T 20-04-2016 IPR008962 PapD-like AMC99_RS09020 3995a23b4be7c88bd90fa0ffa4679e52 265 SUPERFAMILY SSF52402 28 213 5.18E-49 T 20-04-2016 AMC99_RS09020 3995a23b4be7c88bd90fa0ffa4679e52 265 PANTHER PTHR23293 27 248 8.1E-69 T 20-04-2016 AMC99_RS09020 3995a23b4be7c88bd90fa0ffa4679e52 265 Gene3D G3DSA:3.40.50.620 36 220 5.6E-51 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS09020 3995a23b4be7c88bd90fa0ffa4679e52 265 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 54 225 3.7E-43 T 20-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 AMC99_RS09020 3995a23b4be7c88bd90fa0ffa4679e52 265 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 47 248 1.5E-56 T 20-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 AMC99_RS09020 3995a23b4be7c88bd90fa0ffa4679e52 265 PANTHER PTHR23293:SF5 27 248 8.1E-69 T 20-04-2016 AMC99_RS09020 3995a23b4be7c88bd90fa0ffa4679e52 265 PIRSF PIRSF000857 5 254 7.9E-83 T 20-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 AMC99_RS09020 3995a23b4be7c88bd90fa0ffa4679e52 265 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 13 249 35.732 T 20-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 AMC99_RS04410 78da79c9eb97a3cd61eb80397b4e3ba0 418 Pfam PF02308 MgtC family 9 134 1.3E-16 T 20-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMC99_RS04410 78da79c9eb97a3cd61eb80397b4e3ba0 418 Pfam PF13194 Domain of unknown function (DUF4010) 182 387 4.3E-43 T 20-04-2016 IPR025105 Domain of unknown function DUF4010 AMC99_RS04410 78da79c9eb97a3cd61eb80397b4e3ba0 418 PANTHER PTHR39084 6 417 9.7E-47 T 20-04-2016 AMC99_RS09820 81ee1c2f5c0f852b566e149bdeadad69 238 PANTHER PTHR13696 1 212 9.9E-35 T 20-04-2016 AMC99_RS09820 81ee1c2f5c0f852b566e149bdeadad69 238 SUPERFAMILY SSF52540 2 207 2.9E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09820 81ee1c2f5c0f852b566e149bdeadad69 238 PANTHER PTHR13696:SF66 1 212 9.9E-35 T 20-04-2016 AMC99_RS09820 81ee1c2f5c0f852b566e149bdeadad69 238 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 143 2.2E-19 T 20-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMC99_RS09820 81ee1c2f5c0f852b566e149bdeadad69 238 Gene3D G3DSA:3.40.50.300 2 208 1.9E-33 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS09820 81ee1c2f5c0f852b566e149bdeadad69 238 PIRSF PIRSF009320 1 211 1.3E-47 T 20-04-2016 AMC99_RS11805 608677a9f033fdd659d3b589294d2999 352 PANTHER PTHR30002:SF4 2 345 6.4E-137 T 20-04-2016 AMC99_RS11805 608677a9f033fdd659d3b589294d2999 352 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 348 6.7E-136 T 20-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS11805 608677a9f033fdd659d3b589294d2999 352 PANTHER PTHR30002 2 345 6.4E-137 T 20-04-2016 AMC99_RS11805 608677a9f033fdd659d3b589294d2999 352 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 316 45.791 T 20-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS11805 608677a9f033fdd659d3b589294d2999 352 Pfam PF13484 4Fe-4S double cluster binding domain 193 256 6.9E-18 T 20-04-2016 AMC99_RS11805 608677a9f033fdd659d3b589294d2999 352 Gene3D G3DSA:3.30.70.20 190 261 1.0E-7 T 20-04-2016 AMC99_RS11805 608677a9f033fdd659d3b589294d2999 352 Pfam PF08331 Domain of unknown function (DUF1730) 63 140 3.6E-24 T 20-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 AMC99_RS11805 608677a9f033fdd659d3b589294d2999 352 SUPERFAMILY SSF46548 166 256 7.85E-18 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMC99_RS11805 608677a9f033fdd659d3b589294d2999 352 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_RS12275 3e5cd908892084068040dbc52d0be642 256 PANTHER PTHR30337 9 213 5.0E-16 T 20-04-2016 AMC99_RS12275 3e5cd908892084068040dbc52d0be642 256 Pfam PF00149 Calcineurin-like phosphoesterase 9 199 2.4E-19 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMC99_RS12275 3e5cd908892084068040dbc52d0be642 256 PANTHER PTHR30337:SF0 9 213 5.0E-16 T 20-04-2016 AMC99_RS12275 3e5cd908892084068040dbc52d0be642 256 SUPERFAMILY SSF56300 9 251 1.57E-43 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like AMC99_RS12275 3e5cd908892084068040dbc52d0be642 256 Gene3D G3DSA:3.60.21.10 7 250 6.3E-40 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like AMC99_RS04930 474d23db9693d126748d92177903f4b2 414 SUPERFAMILY SSF47781 308 382 4.45E-9 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMC99_RS04930 474d23db9693d126748d92177903f4b2 414 Gene3D G3DSA:3.20.20.70 54 191 3.2E-11 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_RS04930 474d23db9693d126748d92177903f4b2 414 SUPERFAMILY SSF102114 48 199 3.14E-16 T 20-04-2016 AMC99_RS04930 474d23db9693d126748d92177903f4b2 414 SMART SM00729 59 286 0.0078 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMC99_RS04930 474d23db9693d126748d92177903f4b2 414 PANTHER PTHR21180 137 408 1.1E-115 T 20-04-2016 AMC99_RS04930 474d23db9693d126748d92177903f4b2 414 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 8 403 6.9E-174 T 20-04-2016 IPR023874 DNA modification/repair radical SAM protein, putative AMC99_RS04930 474d23db9693d126748d92177903f4b2 414 PANTHER PTHR21180:SF9 137 408 1.1E-115 T 20-04-2016 IPR023874 DNA modification/repair radical SAM protein, putative AMC99_RS11235 c6785cd1918e4ca81060c132b4c542f7 177 Gene3D G3DSA:1.25.10.10 67 128 4.0E-7 T 20-04-2016 IPR011989 Armadillo-like helical AMC99_RS11235 c6785cd1918e4ca81060c132b4c542f7 177 SUPERFAMILY SSF48371 55 128 4.87E-8 T 20-04-2016 IPR016024 Armadillo-type fold GO:0005488 AMC99_RS09740 ac505c73d2708998c3ce08c164d3c0ea 162 Pfam PF01522 Polysaccharide deacetylase 40 159 4.1E-28 T 20-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_RS09740 ac505c73d2708998c3ce08c164d3c0ea 162 PANTHER PTHR10587 41 161 1.2E-29 T 20-04-2016 AMC99_RS09740 ac505c73d2708998c3ce08c164d3c0ea 162 SUPERFAMILY SSF88713 30 159 2.78E-37 T 20-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_RS09740 ac505c73d2708998c3ce08c164d3c0ea 162 Gene3D G3DSA:3.20.20.370 9 161 4.5E-38 T 20-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_RS07850 3a8d1a7471068f1aefbcc711a76c23e8 146 Pfam PF05443 ROS/MUCR transcriptional regulator protein 12 132 9.1E-49 T 20-04-2016 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 AMC99_RS05485 a2ddf62cd326a293aca26b111ceeb483 214 Pfam PF10077 Uncharacterized protein conserved in bacteria (DUF2314) 31 95 1.1E-5 T 20-04-2016 IPR018756 Domain of unknown function DUF2314 AMC99_RS05485 a2ddf62cd326a293aca26b111ceeb483 214 Pfam PF09951 Protein of unknown function (DUF2185) 119 206 2.7E-6 T 20-04-2016 IPR018689 Domain of unknown function DUF2185 AMC99_RS05085 99a97008ee8e5f568c7b67ac35b0a0d3 294 Pfam PF12710 haloacid dehalogenase-like hydrolase 83 249 7.5E-20 T 20-04-2016 AMC99_RS05085 99a97008ee8e5f568c7b67ac35b0a0d3 294 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 166 176 5.6E-6 T 20-04-2016 AMC99_RS05085 99a97008ee8e5f568c7b67ac35b0a0d3 294 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 239 258 5.6E-6 T 20-04-2016 AMC99_RS05085 99a97008ee8e5f568c7b67ac35b0a0d3 294 Gene3D G3DSA:1.10.150.210 91 141 1.5E-26 T 20-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 AMC99_RS05085 99a97008ee8e5f568c7b67ac35b0a0d3 294 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 79 284 1.6E-63 T 20-04-2016 AMC99_RS05085 99a97008ee8e5f568c7b67ac35b0a0d3 294 PANTHER PTHR10000:SF7 79 290 7.5E-66 T 20-04-2016 AMC99_RS05085 99a97008ee8e5f568c7b67ac35b0a0d3 294 PANTHER PTHR10000 79 290 7.5E-66 T 20-04-2016 AMC99_RS05085 99a97008ee8e5f568c7b67ac35b0a0d3 294 SUPERFAMILY SSF56784 80 282 1.25E-45 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS05085 99a97008ee8e5f568c7b67ac35b0a0d3 294 Gene3D G3DSA:3.40.50.1000 142 281 2.6E-36 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS05085 99a97008ee8e5f568c7b67ac35b0a0d3 294 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 81 251 2.4E-35 T 20-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 AMC99_RS09540 ea85a1e836907ce104a968a8cfdd0c86 188 PANTHER PTHR36922 1 183 2.4E-32 T 20-04-2016 AMC99_RS09540 ea85a1e836907ce104a968a8cfdd0c86 188 Pfam PF09351 Domain of unknown function (DUF1993) 6 173 3.9E-43 T 20-04-2016 IPR018531 Domain of unknown function DUF1993 AMC99_RS09540 ea85a1e836907ce104a968a8cfdd0c86 188 SUPERFAMILY SSF109854 3 177 3.57E-42 T 20-04-2016 AMC99_RS09540 ea85a1e836907ce104a968a8cfdd0c86 188 Gene3D G3DSA:1.20.120.450 1 173 3.7E-50 T 20-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase AMC99_RS03780 fd12bef71f5e0c94f2322d67518b711c 348 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 7.2E-7 T 20-04-2016 AMC99_RS03780 fd12bef71f5e0c94f2322d67518b711c 348 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 7.2E-7 T 20-04-2016 AMC99_RS03780 fd12bef71f5e0c94f2322d67518b711c 348 Gene3D G3DSA:3.50.50.60 4 144 3.5E-24 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03780 fd12bef71f5e0c94f2322d67518b711c 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 4.3E-7 T 20-04-2016 AMC99_RS03780 fd12bef71f5e0c94f2322d67518b711c 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.3E-7 T 20-04-2016 AMC99_RS03780 fd12bef71f5e0c94f2322d67518b711c 348 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 329 3.5E-21 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03780 fd12bef71f5e0c94f2322d67518b711c 348 SUPERFAMILY SSF51905 1 340 2.46E-33 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS03780 fd12bef71f5e0c94f2322d67518b711c 348 Gene3D G3DSA:3.50.50.60 215 341 5.5E-14 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS00930 757640d1f84541b503cb030f46e32528 208 PANTHER PTHR41795 6 200 1.8E-22 T 20-04-2016 AMC99_RS00930 757640d1f84541b503cb030f46e32528 208 PIRSF PIRSF033239 1 199 1.0E-52 T 20-04-2016 IPR010331 Exopolysaccharide synthesis, ExoD AMC99_RS00930 757640d1f84541b503cb030f46e32528 208 Pfam PF06055 Exopolysaccharide synthesis, ExoD 12 186 9.5E-47 T 20-04-2016 IPR010331 Exopolysaccharide synthesis, ExoD AMC99_RS10725 5b633ac0ffb8023974a4980cf5a8b5e6 233 Gene3D G3DSA:3.40.50.150 48 213 2.5E-28 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10725 5b633ac0ffb8023974a4980cf5a8b5e6 233 Pfam PF05050 Methyltransferase FkbM domain 59 214 3.1E-10 T 20-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- AMC99_RS10725 5b633ac0ffb8023974a4980cf5a8b5e6 233 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 57 202 3.8E-23 T 20-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- AMC99_RS10725 5b633ac0ffb8023974a4980cf5a8b5e6 233 SUPERFAMILY SSF53335 44 187 4.65E-31 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS10595 e1d223137c90c7b9446339e6937cbc53 270 SUPERFAMILY SSF51182 11 226 8.19E-50 T 20-04-2016 IPR011051 RmlC-like cupin domain AMC99_RS10595 e1d223137c90c7b9446339e6937cbc53 270 PANTHER PTHR18964:SF142 54 181 1.0E-35 T 20-04-2016 AMC99_RS10595 e1d223137c90c7b9446339e6937cbc53 270 Gene3D G3DSA:2.60.120.10 42 179 6.4E-42 T 20-04-2016 IPR014710 RmlC-like jelly roll fold AMC99_RS10595 e1d223137c90c7b9446339e6937cbc53 270 Pfam PF01238 Phosphomannose isomerase type I 35 74 3.0E-5 T 20-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 AMC99_RS10595 e1d223137c90c7b9446339e6937cbc53 270 PANTHER PTHR18964 54 181 1.0E-35 T 20-04-2016 AMC99_RS04155 6fa45acdc7c04fa147c947b483f0fbe3 418 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 2 417 46.486 T 20-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 AMC99_RS04155 6fa45acdc7c04fa147c947b483f0fbe3 418 PANTHER PTHR30420 3 408 5.4E-141 T 20-04-2016 AMC99_RS04155 6fa45acdc7c04fa147c947b483f0fbe3 418 Pfam PF04996 Succinylarginine dihydrolase 5 416 5.0E-166 T 20-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 AMC99_RS04155 6fa45acdc7c04fa147c947b483f0fbe3 418 Gene3D G3DSA:3.75.10.20 4 417 2.1E-166 T 20-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 AMC99_RS04155 6fa45acdc7c04fa147c947b483f0fbe3 418 PANTHER PTHR30420:SF2 3 408 5.4E-141 T 20-04-2016 AMC99_RS04155 6fa45acdc7c04fa147c947b483f0fbe3 418 SUPERFAMILY SSF55909 4 417 7.19E-169 T 20-04-2016 AMC99_RS13725 750541a881227269ea0098f69f6098a5 111 Gene3D G3DSA:2.40.10.220 16 109 2.7E-6 T 20-04-2016 AMC99_RS13725 750541a881227269ea0098f69f6098a5 111 SUPERFAMILY SSF141371 15 102 1.61E-12 T 20-04-2016 AMC99_RS13725 750541a881227269ea0098f69f6098a5 111 Pfam PF07238 PilZ domain 18 109 8.4E-13 T 20-04-2016 IPR009875 PilZ domain GO:0035438 AMC99_RS10930 51bf92a228d78681a1caffd2e753db44 277 SMART SM00244 24 193 1.1E-20 T 20-04-2016 IPR001107 Band 7 domain AMC99_RS10930 51bf92a228d78681a1caffd2e753db44 277 Pfam PF01145 SPFH domain / Band 7 family 28 207 3.2E-24 T 20-04-2016 IPR001107 Band 7 domain AMC99_RS10930 51bf92a228d78681a1caffd2e753db44 277 PIRSF PIRSF005651 2 277 8.3E-59 T 20-04-2016 IPR010200 HflC GO:0016021|GO:0052547 AMC99_RS10930 51bf92a228d78681a1caffd2e753db44 277 PRINTS PR00721 Stomatin signature 168 186 9.2E-5 T 20-04-2016 IPR001972 Stomatin family GO:0016020 AMC99_RS10930 51bf92a228d78681a1caffd2e753db44 277 PRINTS PR00721 Stomatin signature 85 106 9.2E-5 T 20-04-2016 IPR001972 Stomatin family GO:0016020 AMC99_RS10930 51bf92a228d78681a1caffd2e753db44 277 PRINTS PR00721 Stomatin signature 187 208 9.2E-5 T 20-04-2016 IPR001972 Stomatin family GO:0016020 AMC99_RS10930 51bf92a228d78681a1caffd2e753db44 277 PANTHER PTHR10264 13 274 1.1E-45 T 20-04-2016 IPR001972 Stomatin family GO:0016020 AMC99_RS10930 51bf92a228d78681a1caffd2e753db44 277 SUPERFAMILY SSF117892 63 199 3.14E-24 T 20-04-2016 IPR001107 Band 7 domain AMC99_RS10930 51bf92a228d78681a1caffd2e753db44 277 PANTHER PTHR10264:SF80 13 274 1.1E-45 T 20-04-2016 AMC99_RS13150 076319c5d960e7bb62e5c41483747637 300 SMART SM00342 187 271 4.3E-4 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_RS13150 076319c5d960e7bb62e5c41483747637 300 Gene3D G3DSA:1.10.10.60 169 225 1.5E-5 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 AMC99_RS13150 076319c5d960e7bb62e5c41483747637 300 Pfam PF12833 Helix-turn-helix domain 195 271 1.1E-12 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_RS01625 f1e04f289246e8b1ea28fcd5d0676517 309 PANTHER PTHR21091 159 290 2.6E-33 T 20-04-2016 AMC99_RS01625 f1e04f289246e8b1ea28fcd5d0676517 309 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 29 300 8.9E-101 T 20-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AMC99_RS01625 f1e04f289246e8b1ea28fcd5d0676517 309 Pfam PF02219 Methylenetetrahydrofolate reductase 25 301 9.0E-94 T 20-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AMC99_RS01625 f1e04f289246e8b1ea28fcd5d0676517 309 PANTHER PTHR21091:SF31 159 290 2.6E-33 T 20-04-2016 AMC99_RS01625 f1e04f289246e8b1ea28fcd5d0676517 309 Gene3D G3DSA:3.20.20.220 25 305 7.1E-102 T 20-04-2016 IPR029041 FAD-linked oxidoreductase-like AMC99_RS01625 f1e04f289246e8b1ea28fcd5d0676517 309 SUPERFAMILY SSF51730 25 304 7.26E-96 T 20-04-2016 IPR029041 FAD-linked oxidoreductase-like AMC99_RS11125 f3d7a5e2f83b94bd7f5aa294ba3c93dd 84 Pfam PF04325 Protein of unknown function (DUF465) 31 76 3.7E-10 T 20-04-2016 IPR007420 Protein of unknown function DUF465 AMC99_RS11835 83da5eaad8432ece3e7a93a37eb6e2fa 151 Pfam PF04138 GtrA-like protein 28 145 9.8E-14 T 20-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 AMC99_RS04280 9934ebf7590d639c8b5171f7b6f9f018 243 SUPERFAMILY SSF56784 20 242 6.75E-36 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS04280 9934ebf7590d639c8b5171f7b6f9f018 243 PANTHER PTHR10788 20 242 2.8E-29 T 20-04-2016 AMC99_RS04280 9934ebf7590d639c8b5171f7b6f9f018 243 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 21 210 2.8E-16 T 20-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 AMC99_RS04280 9934ebf7590d639c8b5171f7b6f9f018 243 Pfam PF02358 Trehalose-phosphatase 22 233 1.7E-32 T 20-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AMC99_RS04280 9934ebf7590d639c8b5171f7b6f9f018 243 Gene3D G3DSA:3.40.50.1000 165 242 4.9E-36 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS04280 9934ebf7590d639c8b5171f7b6f9f018 243 Gene3D G3DSA:3.40.50.1000 19 94 4.9E-36 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS04280 9934ebf7590d639c8b5171f7b6f9f018 243 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 20 242 4.8E-37 T 20-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AMC99_RS10405 05d33ae1540fd8ccd8320e3ba902d144 179 Pfam PF02620 Uncharacterized ACR, COG1399 60 163 3.0E-9 T 20-04-2016 IPR003772 Protein of unknown function DUF177 AMC99_RS06915 7b0b4408fbc570635b8ea4eab65e0885 172 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 82 2.2E-31 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06915 7b0b4408fbc570635b8ea4eab65e0885 172 Gene3D G3DSA:3.30.1320.10 3 84 1.2E-32 T 20-04-2016 IPR023803 Ribosomal protein S16 domain AMC99_RS06915 7b0b4408fbc570635b8ea4eab65e0885 172 Pfam PF00886 Ribosomal protein S16 9 70 1.7E-26 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06915 7b0b4408fbc570635b8ea4eab65e0885 172 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 20-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06915 7b0b4408fbc570635b8ea4eab65e0885 172 SUPERFAMILY SSF54565 3 88 1.44E-31 T 20-04-2016 IPR023803 Ribosomal protein S16 domain AMC99_RS06915 7b0b4408fbc570635b8ea4eab65e0885 172 PANTHER PTHR12919 2 168 3.0E-46 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS06915 7b0b4408fbc570635b8ea4eab65e0885 172 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 24.0 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS12600 a6aabeacf06c1959a08c51daadaf4482 241 Pfam PF06242 Protein of unknown function (DUF1013) 36 171 4.2E-60 T 20-04-2016 IPR010421 Protein of unknown function DUF1013 AMC99_RS06605 8689b0c045d7bd040cb4091385a3a16d 126 SUPERFAMILY SSF81343 3 124 5.67E-27 T 20-04-2016 AMC99_RS06605 8689b0c045d7bd040cb4091385a3a16d 126 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 3 121 3.4E-31 T 20-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 AMC99_RS06605 8689b0c045d7bd040cb4091385a3a16d 126 PANTHER PTHR10978:SF6 3 124 1.2E-26 T 20-04-2016 AMC99_RS06605 8689b0c045d7bd040cb4091385a3a16d 126 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 4 28 - T 20-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 AMC99_RS06605 8689b0c045d7bd040cb4091385a3a16d 126 PIRSF PIRSF000178 1 124 1.2E-27 T 20-04-2016 AMC99_RS06605 8689b0c045d7bd040cb4091385a3a16d 126 Gene3D G3DSA:1.20.1300.10 2 124 3.1E-35 T 20-04-2016 AMC99_RS06605 8689b0c045d7bd040cb4091385a3a16d 126 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 118 2.7E-25 T 20-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 AMC99_RS06605 8689b0c045d7bd040cb4091385a3a16d 126 PANTHER PTHR10978 3 124 1.2E-26 T 20-04-2016 AMC99_RS05860 5556bee8e4ec8f5efdf0ad07bd3bb802 239 SUPERFAMILY SSF48576 35 121 1.24E-6 T 20-04-2016 IPR008949 Isoprenoid synthase domain AMC99_RS01680 d10f030aa7625b30846589eacde93f98 129 Gene3D G3DSA:3.10.180.10 2 127 2.0E-26 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS01680 d10f030aa7625b30846589eacde93f98 129 PANTHER PTHR36437:SF2 1 127 7.9E-44 T 20-04-2016 AMC99_RS01680 d10f030aa7625b30846589eacde93f98 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 121 4.5E-18 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_RS01680 d10f030aa7625b30846589eacde93f98 129 SUPERFAMILY SSF54593 3 127 3.09E-29 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS01680 d10f030aa7625b30846589eacde93f98 129 PANTHER PTHR36437 1 127 7.9E-44 T 20-04-2016 AMC99_RS09710 5ad874994105ae9f8de27fb514e4a1ab 219 Pfam PF10090 Histidine phosphotransferase 26 207 2.2E-54 T 20-04-2016 IPR018762 Histidine phosphotransferase AMC99_RS13020 315c44f3bc34e5bab24e0f14945c164c 194 PANTHER PTHR30128 48 171 1.3E-21 T 20-04-2016 AMC99_RS13020 315c44f3bc34e5bab24e0f14945c164c 194 SUPERFAMILY SSF103088 55 170 1.18E-24 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS13020 315c44f3bc34e5bab24e0f14945c164c 194 Gene3D G3DSA:3.30.1330.60 52 170 5.9E-27 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS13020 315c44f3bc34e5bab24e0f14945c164c 194 Pfam PF00691 OmpA family 64 152 1.0E-15 T 20-04-2016 IPR006665 OmpA-like domain AMC99_RS05530 79d581ddb653c3f24e594a7890e3b590 550 Pfam PF09977 Putative Tad-like Flp pilus-assembly 89 148 1.1E-5 T 20-04-2016 IPR018705 Domain of unknown function DUF2134, membrane AMC99_RS05530 79d581ddb653c3f24e594a7890e3b590 550 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 17 61 1.3E-9 T 20-04-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AMC99_RS05415 a8d531dd78901f1e34191d7db49b6ada 249 Gene3D G3DSA:3.40.50.150 87 247 3.1E-11 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS05415 a8d531dd78901f1e34191d7db49b6ada 249 PANTHER PTHR13090 72 248 2.0E-21 T 20-04-2016 AMC99_RS05415 a8d531dd78901f1e34191d7db49b6ada 249 PANTHER PTHR13090:SF1 72 248 2.0E-21 T 20-04-2016 AMC99_RS05415 a8d531dd78901f1e34191d7db49b6ada 249 Pfam PF13489 Methyltransferase domain 85 175 9.8E-7 T 20-04-2016 AMC99_RS05415 a8d531dd78901f1e34191d7db49b6ada 249 SUPERFAMILY SSF53335 87 188 4.56E-11 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS12280 18b7a1568d6d38facd200e70252f0fea 284 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 122 1.2E-11 T 20-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMC99_RS12280 18b7a1568d6d38facd200e70252f0fea 284 SUPERFAMILY SSF111331 7 274 3.05E-17 T 20-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain AMC99_RS03255 ce0aa0783f6fd3cc1e3c1d07a1bc6382 92 PANTHER PTHR12219:SF18 1 91 3.8E-25 T 20-04-2016 AMC99_RS03255 ce0aa0783f6fd3cc1e3c1d07a1bc6382 92 Gene3D G3DSA:3.30.160.190 1 77 7.9E-32 T 20-04-2016 AMC99_RS03255 ce0aa0783f6fd3cc1e3c1d07a1bc6382 92 Pfam PF04800 ETC complex I subunit conserved region 3 92 1.8E-31 T 20-04-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 AMC99_RS03255 ce0aa0783f6fd3cc1e3c1d07a1bc6382 92 PANTHER PTHR12219 1 91 3.8E-25 T 20-04-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 AMC99_RS13370 0469723e3fee4929ad9ddd9adae96096 209 Gene3D G3DSA:3.40.50.1000 6 19 1.9E-6 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS13370 0469723e3fee4929ad9ddd9adae96096 209 Gene3D G3DSA:3.40.50.1000 75 158 1.9E-6 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS13370 0469723e3fee4929ad9ddd9adae96096 209 SUPERFAMILY SSF56784 4 202 5.2E-10 T 20-04-2016 IPR023214 HAD-like domain AMC99_RS11285 c78dbbc703aaa0aabe32ac444e4ca9c2 266 Pfam PF06966 Protein of unknown function (DUF1295) 20 256 1.5E-66 T 20-04-2016 IPR010721 Protein of unknown function DUF1295 AMC99_RS11285 c78dbbc703aaa0aabe32ac444e4ca9c2 266 PANTHER PTHR32251 2 265 1.7E-73 T 20-04-2016 AMC99_RS05310 a24cc9c85b76dfd05f7e7d4d0700a454 101 Gene3D G3DSA:1.10.10.10 39 86 2.7E-4 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS03860 85be6c39448b43cdc0f101cad0138630 147 SUPERFAMILY SSF47240 5 128 7.57E-13 T 20-04-2016 IPR009078 Ferritin-like superfamily AMC99_RS03860 85be6c39448b43cdc0f101cad0138630 147 Gene3D G3DSA:1.20.1260.10 5 114 4.2E-7 T 20-04-2016 IPR012347 Ferritin-related AMC99_RS07000 edba450ecb512a5aa75674fc0bcf46aa 62 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 15 62 3.0E-13 T 20-04-2016 AMC99_RS07000 edba450ecb512a5aa75674fc0bcf46aa 62 Pfam PF13617 YnbE-like lipoprotein 10 60 1.0E-14 T 20-04-2016 IPR025985 YnbE-like lipoprotein AMC99_RS04035 3d514ef63e6cc1dcfcbb109bb44a8c5c 226 Pfam PF06904 Extensin-like protein C-terminus 51 226 8.4E-56 T 20-04-2016 IPR009683 Extensin-like, C-terminal AMC99_RS11680 8d77c26c18e4228a345432a8da83ce7d 85 Pfam PF13467 Ribbon-helix-helix domain 9 73 7.4E-22 T 20-04-2016 IPR027373 Ribbon-helix-helix domain AMC99_RS12295 490d901d883bfd82c51b342ba9f475e5 412 SMART SM00387 310 412 8.8E-8 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS12295 490d901d883bfd82c51b342ba9f475e5 412 PANTHER PTHR34220 160 412 1.3E-51 T 20-04-2016 AMC99_RS12295 490d901d883bfd82c51b342ba9f475e5 412 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 409 2.3E-7 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS12295 490d901d883bfd82c51b342ba9f475e5 412 SUPERFAMILY SSF55874 298 408 5.76E-16 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS12295 490d901d883bfd82c51b342ba9f475e5 412 Gene3D G3DSA:3.30.565.10 275 410 3.3E-14 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMC99_RS12295 490d901d883bfd82c51b342ba9f475e5 412 Pfam PF06580 Histidine kinase 219 299 1.1E-22 T 20-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AMC99_RS03155 bfcb84f19850237aee16a8ec6b5f0256 137 Pfam PF11351 Holin of 3TMs, for gene-transfer release 6 128 3.1E-29 T 20-04-2016 IPR021497 Holin of 3TMs, for gene-transfer release AMC99_RS00280 d4ec24727b7350a9341f127d2430ef12 144 Pfam PF09217 Restriction endonuclease EcoRII, N-terminal 4 97 1.1E-17 T 20-04-2016 IPR023372 Restriction endonuclease, type II, EcoRII, N-terminal AMC99_RS00280 d4ec24727b7350a9341f127d2430ef12 144 Gene3D G3DSA:2.40.330.10 3 132 1.7E-39 T 20-04-2016 IPR015300 DNA-binding pseudobarrel domain AMC99_RS00280 d4ec24727b7350a9341f127d2430ef12 144 SUPERFAMILY SSF101936 4 129 3.14E-39 T 20-04-2016 IPR015300 DNA-binding pseudobarrel domain AMC99_RS06045 ca2747bb111bcbb1a3d280ace92fec1b 90 Pfam PF07330 Protein of unknown function (DUF1467) 1 82 8.1E-28 T 20-04-2016 IPR009935 Protein of unknown function DUF1467 AMC99_RS09795 15eb32de8d8d34417c736b641bfd50e9 94 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 3.7E-37 T 20-04-2016 IPR021724 Protein of unknown function DUF3297 AMC99_RS02575 84701c3a6a4b5f963246ff039b4726ec 491 PANTHER PTHR10543 17 489 3.3E-127 T 20-04-2016 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 AMC99_RS02575 84701c3a6a4b5f963246ff039b4726ec 491 Pfam PF03055 Retinal pigment epithelial membrane protein 26 484 3.8E-93 T 20-04-2016 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 AMC99_RS02575 84701c3a6a4b5f963246ff039b4726ec 491 PANTHER PTHR10543:SF37 17 489 3.3E-127 T 20-04-2016 AMC99_RS09650 27f080b886cc563584711e4cae5d66c4 303 PANTHER PTHR30269 11 295 3.3E-58 T 20-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMC99_RS09650 27f080b886cc563584711e4cae5d66c4 303 PANTHER PTHR30269:SF15 11 295 3.3E-58 T 20-04-2016 AMC99_RS09650 27f080b886cc563584711e4cae5d66c4 303 Pfam PF01925 Sulfite exporter TauE/SafE 18 286 1.3E-44 T 20-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMC99_RS10305 1dc110a4b8b415e898d5a0db465f4157 237 SUPERFAMILY SSF102405 17 192 1.56E-5 T 20-04-2016 AMC99_RS00795 0ebc8a9743a9f4574fd50bad24c53bee 77 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 12 70 2.5E-17 T 20-04-2016 IPR021074 Formate dehydrogenase, delta subunit AMC99_RS07615 42afaeb38d66c52ea4c5b7467022e458 3761 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 660 736 3.4E-13 T 20-04-2016 IPR010221 VCBS repeat AMC99_RS07615 42afaeb38d66c52ea4c5b7467022e458 3761 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2894 2990 3.6E-11 T 20-04-2016 IPR010221 VCBS repeat AMC99_RS07615 42afaeb38d66c52ea4c5b7467022e458 3761 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2787 2865 4.7E-13 T 20-04-2016 IPR010221 VCBS repeat AMC99_RS07615 42afaeb38d66c52ea4c5b7467022e458 3761 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 382 415 0.0014 T 20-04-2016 IPR010221 VCBS repeat AMC99_RS07615 42afaeb38d66c52ea4c5b7467022e458 3761 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1635 1676 0.0026 T 20-04-2016 IPR010221 VCBS repeat AMC99_RS05665 1d3790fcd30e8e0f881a330931ee5815 185 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 12 71 8.9E-30 T 20-04-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal AMC99_RS05665 1d3790fcd30e8e0f881a330931ee5815 185 Pfam PF05233 PHB accumulation regulatory domain 76 115 1.7E-18 T 20-04-2016 IPR007897 PHB accumulation regulatory AMC99_RS05665 1d3790fcd30e8e0f881a330931ee5815 185 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 11 116 1.5E-45 T 20-04-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR AMC99_RS07785 de8df543dfe7336cf0d820cda86def72 333 Gene3D G3DSA:3.90.15.10 89 218 7.8E-35 T 20-04-2016 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 AMC99_RS07785 de8df543dfe7336cf0d820cda86def72 333 Gene3D G3DSA:1.20.120.380 233 294 1.2E-14 T 20-04-2016 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 AMC99_RS07785 de8df543dfe7336cf0d820cda86def72 333 SUPERFAMILY SSF56349 79 315 3.3E-60 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMC99_RS07785 de8df543dfe7336cf0d820cda86def72 333 SUPERFAMILY SSF55869 23 84 8.37E-19 T 20-04-2016 AMC99_RS07785 de8df543dfe7336cf0d820cda86def72 333 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 83 252 7.3E-26 T 20-04-2016 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003918|GO:0006265 AMC99_RS07785 de8df543dfe7336cf0d820cda86def72 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 123 142 2.0E-7 T 20-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AMC99_RS07785 de8df543dfe7336cf0d820cda86def72 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 146 160 2.0E-7 T 20-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AMC99_RS07785 de8df543dfe7336cf0d820cda86def72 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 232 246 2.0E-7 T 20-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AMC99_RS07785 de8df543dfe7336cf0d820cda86def72 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 276 287 2.0E-7 T 20-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AMC99_RS06580 18e62b3cc939fdfd2419747d0d213f65 218 Gene3D G3DSA:2.40.100.10 37 210 4.7E-28 T 20-04-2016 IPR029000 Cyclophilin-like domain AMC99_RS06580 18e62b3cc939fdfd2419747d0d213f65 218 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 41 200 5.2E-26 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMC99_RS06580 18e62b3cc939fdfd2419747d0d213f65 218 SUPERFAMILY SSF50891 37 211 9.2E-31 T 20-04-2016 IPR029000 Cyclophilin-like domain AMC99_RS06580 18e62b3cc939fdfd2419747d0d213f65 218 PANTHER PTHR11071:SF192 42 183 2.1E-22 T 20-04-2016 AMC99_RS06580 18e62b3cc939fdfd2419747d0d213f65 218 PANTHER PTHR11071 42 183 2.1E-22 T 20-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 AMC99_RS09065 bd647dc9c3993acbb96598dc9509e721 168 Pfam PF10722 Putative bacterial sensory transduction regulator 16 145 5.3E-29 T 20-04-2016 IPR019660 Putative sensory transduction regulator YbjN AMC99_RS00210 3da43d27c0012132c97ab668a04643d1 309 Pfam PF08401 Domain of unknown function (DUF1738) 13 126 3.0E-34 T 20-04-2016 IPR013610 Domain of unknown function DUF1738 AMC99_RS00210 3da43d27c0012132c97ab668a04643d1 309 PIRSF PIRSF037112 1 303 4.0E-108 T 20-04-2016 IPR017113 Antirestriction, ArdC AMC99_RS09995 0fdd3ec1816dabe02f262a9c68ccd5cf 232 Pfam PF14014 Protein of unknown function (DUF4230) 66 216 1.6E-15 T 20-04-2016 IPR025324 Protein of unknown function DUF4230 AMC99_RS01155 e224ffb6557b2f27b161cfda3363d013 256 PANTHER PTHR10953:SF158 1 254 1.2E-57 T 20-04-2016 AMC99_RS01155 e224ffb6557b2f27b161cfda3363d013 256 Pfam PF00899 ThiF family 13 250 2.3E-50 T 20-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMC99_RS01155 e224ffb6557b2f27b161cfda3363d013 256 PANTHER PTHR10953 1 254 1.2E-57 T 20-04-2016 AMC99_RS01155 e224ffb6557b2f27b161cfda3363d013 256 SUPERFAMILY SSF69572 3 254 3.01E-68 T 20-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMC99_RS01155 e224ffb6557b2f27b161cfda3363d013 256 Gene3D G3DSA:3.40.50.720 3 254 5.6E-57 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS00320 c3ac45fe9b1d7e8ec50935d44ac72a7a 478 Pfam PF06122 Conjugative relaxosome accessory transposon protein 30 390 1.1E-111 T 20-04-2016 IPR010927 Type IV conjugative transfer system protein TraH AMC99_RS01035 e8931c4f1980f3172ba33c36c7c39647 41 SUPERFAMILY SSF57840 1 41 1.19E-12 T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS01035 e8931c4f1980f3172ba33c36c7c39647 41 Pfam PF00444 Ribosomal protein L36 1 41 1.8E-16 T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS01035 e8931c4f1980f3172ba33c36c7c39647 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.034 T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS01035 e8931c4f1980f3172ba33c36c7c39647 41 PANTHER PTHR18804 1 41 2.6E-16 T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS01035 e8931c4f1980f3172ba33c36c7c39647 41 PANTHER PTHR18804:SF11 1 41 2.6E-16 T 20-04-2016 AMC99_RS01035 e8931c4f1980f3172ba33c36c7c39647 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 9.0E-8 T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_RS11370 a0936bf1cfdadf8bb1ac31ba19f59c67 220 PIRSF PIRSF004848 1 220 6.5E-60 T 20-04-2016 IPR011078 Uncharacterised protein family UPF0001 AMC99_RS11370 a0936bf1cfdadf8bb1ac31ba19f59c67 220 Gene3D G3DSA:3.20.20.10 4 219 7.0E-73 T 20-04-2016 IPR029066 PLP-binding barrel AMC99_RS11370 a0936bf1cfdadf8bb1ac31ba19f59c67 220 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 8.5E-22 T 20-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMC99_RS11370 a0936bf1cfdadf8bb1ac31ba19f59c67 220 SUPERFAMILY SSF51419 6 217 3.93E-68 T 20-04-2016 IPR029066 PLP-binding barrel AMC99_RS11370 a0936bf1cfdadf8bb1ac31ba19f59c67 220 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 219 1.8E-45 T 20-04-2016 IPR011078 Uncharacterised protein family UPF0001 AMC99_RS11370 a0936bf1cfdadf8bb1ac31ba19f59c67 220 PANTHER PTHR10146 8 219 1.8E-76 T 20-04-2016 IPR011078 Uncharacterised protein family UPF0001 AMC99_RS12760 53fbd167703af1ff6072bb7472a9aa4f 464 Pfam PF04932 O-Antigen ligase 233 391 1.7E-10 T 20-04-2016 IPR007016 O-antigen ligase-related AMC99_RS02920 1bb281c70ac8a4bb6f0eb986fe9794ff 452 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 318 408 3.4E-5 T 20-04-2016 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 AMC99_RS10990 8c717fe0be0c672a15c60b1f178a31ee 240 Pfam PF02517 CAAX protease self-immunity 94 183 1.1E-9 T 20-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 AMC99_RS13345 7f2408b4f727a38eab5f9ab81eea9c37 143 Gene3D G3DSA:3.30.300.20 3 140 1.6E-48 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta AMC99_RS13345 7f2408b4f727a38eab5f9ab81eea9c37 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 1.6E-57 T 20-04-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 AMC99_RS13345 7f2408b4f727a38eab5f9ab81eea9c37 143 PANTHER PTHR33797 1 143 2.2E-53 T 20-04-2016 AMC99_RS13345 7f2408b4f727a38eab5f9ab81eea9c37 143 Pfam PF02566 OsmC-like protein 43 139 2.7E-19 T 20-04-2016 IPR003718 OsmC/Ohr family AMC99_RS13345 7f2408b4f727a38eab5f9ab81eea9c37 143 SUPERFAMILY SSF82784 1 141 9.03E-38 T 20-04-2016 IPR003718 OsmC/Ohr family AMC99_RS13345 7f2408b4f727a38eab5f9ab81eea9c37 143 PANTHER PTHR33797:SF1 1 143 2.2E-53 T 20-04-2016 AMC99_RS03050 bd3ca294aac11f830abbd1f6823da553 182 SUPERFAMILY SSF81342 4 180 1.33E-32 T 20-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 AMC99_RS03050 bd3ca294aac11f830abbd1f6823da553 182 PANTHER PTHR30529 1 182 1.3E-43 T 20-04-2016 AMC99_RS03050 bd3ca294aac11f830abbd1f6823da553 182 PANTHER PTHR30529:SF5 1 182 1.3E-43 T 20-04-2016 AMC99_RS03050 bd3ca294aac11f830abbd1f6823da553 182 Pfam PF01292 Prokaryotic cytochrome b561 8 179 7.5E-23 T 20-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AMC99_RS08065 9a2dbeaabc3b3b76be303dfc03e61c87 235 Pfam PF13852 Protein of unknown function (DUF4197) 42 230 1.7E-27 T 20-04-2016 IPR025245 Protein of unknown function DUF4197 AMC99_RS11640 762df3443d7cea1ca80541c4f39c29f3 186 Pfam PF03968 OstA-like protein 49 153 8.0E-16 T 20-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal AMC99_RS11640 762df3443d7cea1ca80541c4f39c29f3 186 PANTHER PTHR36504 10 159 2.2E-12 T 20-04-2016 AMC99_RS11640 762df3443d7cea1ca80541c4f39c29f3 186 Gene3D G3DSA:2.60.450.10 41 163 3.2E-28 T 20-04-2016 AMC99_RS12320 381f138438384eb6bac7dbfd2abe9ba8 130 PANTHER PTHR11780 23 125 8.1E-33 T 20-04-2016 AMC99_RS12320 381f138438384eb6bac7dbfd2abe9ba8 130 Gene3D G3DSA:3.40.30.10 23 126 1.0E-24 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS12320 381f138438384eb6bac7dbfd2abe9ba8 130 PANTHER PTHR11780:SF12 23 125 8.1E-33 T 20-04-2016 AMC99_RS12320 381f138438384eb6bac7dbfd2abe9ba8 130 SUPERFAMILY SSF52833 23 124 6.04E-20 T 20-04-2016 IPR012336 Thioredoxin-like fold AMC99_RS06345 ce854700aa21f63cc11ebb054b44377d 325 SUPERFAMILY SSF55729 141 299 3.46E-22 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS06345 ce854700aa21f63cc11ebb054b44377d 325 Gene3D G3DSA:3.40.630.30 136 276 3.2E-6 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS06345 ce854700aa21f63cc11ebb054b44377d 325 Pfam PF13480 Acetyltransferase (GNAT) domain 158 283 1.2E-15 T 20-04-2016 AMC99_RS05875 700a0f935801ccf3254cc4c6c8f3d929 156 Pfam PF07811 TadE-like protein 16 58 1.2E-10 T 20-04-2016 IPR012495 TadE-like AMC99_RS00175 cb336f0719bccd21d825e3c1fd394151 345 SUPERFAMILY SSF102405 114 292 2.98E-23 T 20-04-2016 AMC99_RS00175 cb336f0719bccd21d825e3c1fd394151 345 PANTHER PTHR32039:SF8 98 280 1.0E-39 T 20-04-2016 AMC99_RS00175 cb336f0719bccd21d825e3c1fd394151 345 Pfam PF02481 DNA recombination-mediator protein A 105 288 1.1E-53 T 20-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 AMC99_RS00175 cb336f0719bccd21d825e3c1fd394151 345 PANTHER PTHR32039 98 280 1.0E-39 T 20-04-2016 AMC99_RS00175 cb336f0719bccd21d825e3c1fd394151 345 Gene3D G3DSA:3.40.50.450 145 290 3.6E-7 T 20-04-2016 AMC99_RS04285 a149e3ce6e0a8c9e456d2a5bce8aace0 597 PANTHER PTHR31616 4 597 3.5E-122 T 20-04-2016 AMC99_RS04285 a149e3ce6e0a8c9e456d2a5bce8aace0 597 Gene3D G3DSA:1.50.10.10 217 593 4.0E-81 T 20-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 AMC99_RS04285 a149e3ce6e0a8c9e456d2a5bce8aace0 597 Pfam PF00723 Glycosyl hydrolases family 15 221 536 3.4E-32 T 20-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 AMC99_RS04285 a149e3ce6e0a8c9e456d2a5bce8aace0 597 SUPERFAMILY SSF48208 204 593 5.29E-85 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 AMC99_RS04285 a149e3ce6e0a8c9e456d2a5bce8aace0 597 PANTHER PTHR31616:SF2 4 597 3.5E-122 T 20-04-2016 AMC99_RS07670 2ea6aaeac00be13c53b3219f0434297b 324 PANTHER PTHR35007 7 324 4.5E-54 T 20-04-2016 AMC99_RS07670 2ea6aaeac00be13c53b3219f0434297b 324 PANTHER PTHR35007:SF2 7 324 4.5E-54 T 20-04-2016 AMC99_RS07670 2ea6aaeac00be13c53b3219f0434297b 324 Pfam PF00482 Type II secretion system (T2SS), protein F 177 304 3.7E-19 T 20-04-2016 IPR018076 Type II secretion system F domain AMC99_RS11455 0b2a99088e556380b869b5b7c46b57a8 477 Gene3D G3DSA:3.40.720.10 35 475 1.5E-146 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMC99_RS11455 0b2a99088e556380b869b5b7c46b57a8 477 PANTHER PTHR11596 41 474 7.3E-182 T 20-04-2016 AMC99_RS11455 0b2a99088e556380b869b5b7c46b57a8 477 PRINTS PR00113 Alkaline phosphatase signature 284 313 1.4E-44 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMC99_RS11455 0b2a99088e556380b869b5b7c46b57a8 477 PRINTS PR00113 Alkaline phosphatase signature 44 64 1.4E-44 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMC99_RS11455 0b2a99088e556380b869b5b7c46b57a8 477 PRINTS PR00113 Alkaline phosphatase signature 205 215 1.4E-44 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMC99_RS11455 0b2a99088e556380b869b5b7c46b57a8 477 PRINTS PR00113 Alkaline phosphatase signature 147 167 1.4E-44 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMC99_RS11455 0b2a99088e556380b869b5b7c46b57a8 477 PRINTS PR00113 Alkaline phosphatase signature 100 115 1.4E-44 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMC99_RS11455 0b2a99088e556380b869b5b7c46b57a8 477 SUPERFAMILY SSF53649 36 476 3.33E-136 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AMC99_RS11455 0b2a99088e556380b869b5b7c46b57a8 477 SMART SM00098 45 476 4.7E-145 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMC99_RS11455 0b2a99088e556380b869b5b7c46b57a8 477 Pfam PF00245 Alkaline phosphatase 44 474 3.0E-114 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMC99_RS07705 b9b96e90835a37c37e4c2b7a7e8b616d 424 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 18 63 4.5E-10 T 20-04-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AMC99_RS06930 637ee25eb7bf991368ae7d98834d0e43 111 Pfam PF09538 Protein of unknown function (FYDLN_acid) 1 100 1.1E-26 T 20-04-2016 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid AMC99_RS00070 519dbfb295bbeb828bf81f7a32f3c0c4 111 SUPERFAMILY SSF46785 29 101 8.92E-10 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS00070 519dbfb295bbeb828bf81f7a32f3c0c4 111 Gene3D G3DSA:1.10.10.10 17 101 1.7E-10 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS08560 db7b65d902f061871ada0b4cd00aca0b 232 SUPERFAMILY SSF52540 5 191 1.39E-18 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS08560 db7b65d902f061871ada0b4cd00aca0b 232 PANTHER PTHR36978 1 222 4.4E-23 T 20-04-2016 AMC99_RS06565 4803964f515d342c84974d2015bba4d4 469 PIRSF PIRSF004548 1 467 3.7E-120 T 20-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD AMC99_RS06565 4803964f515d342c84974d2015bba4d4 469 PANTHER PTHR30092 4 272 4.2E-113 T 20-04-2016 AMC99_RS06565 4803964f515d342c84974d2015bba4d4 469 PANTHER PTHR30092 292 469 4.2E-113 T 20-04-2016 AMC99_RS06565 4803964f515d342c84974d2015bba4d4 469 Pfam PF06123 Inner membrane protein CreD 8 456 2.9E-121 T 20-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD AMC99_RS07150 b315127cb6b02b84b487862efd9aa5f7 274 SUPERFAMILY SSF53335 19 206 1.4E-25 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS07150 b315127cb6b02b84b487862efd9aa5f7 274 PANTHER PTHR10108 14 222 2.0E-12 T 20-04-2016 AMC99_RS07150 b315127cb6b02b84b487862efd9aa5f7 274 Gene3D G3DSA:3.40.50.150 13 252 8.6E-28 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS07150 b315127cb6b02b84b487862efd9aa5f7 274 Pfam PF13847 Methyltransferase domain 42 128 1.0E-11 T 20-04-2016 IPR025714 Methyltransferase domain AMC99_RS01220 fcf08a3e6eeee4d4553c2e2abf80aaf7 227 Pfam PF13590 Domain of unknown function (DUF4136) 36 208 1.6E-22 T 20-04-2016 IPR025411 Domain of unknown function DUF4136 AMC99_RS11935 8e25b304e9cf4b44af0734b07c8f7e68 341 Pfam PF00781 Diacylglycerol kinase catalytic domain 34 141 5.0E-11 T 20-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMC99_RS11935 8e25b304e9cf4b44af0734b07c8f7e68 341 SUPERFAMILY SSF111331 33 335 7.85E-27 T 20-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain AMC99_RS10780 5e73fba7d53efef13710fd871f78c0a9 100 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 3 92 4.2E-12 T 20-04-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein AMC99_RS06570 2daef44bbd38f0a0d3be16f99955ccae 533 Pfam PF05569 BlaR1 peptidase M56 7 277 2.0E-34 T 20-04-2016 IPR008756 Peptidase M56 AMC99_RS06570 2daef44bbd38f0a0d3be16f99955ccae 533 PANTHER PTHR34978:SF2 99 362 3.2E-15 T 20-04-2016 AMC99_RS06570 2daef44bbd38f0a0d3be16f99955ccae 533 PANTHER PTHR34978 99 362 3.2E-15 T 20-04-2016 AMC99_RS08555 424cff4d704caa126278b6ecf3a55009 385 Pfam PF01555 DNA methylase 46 266 9.8E-56 T 20-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AMC99_RS08555 424cff4d704caa126278b6ecf3a55009 385 Gene3D G3DSA:3.40.50.150 24 273 1.3E-74 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS08555 424cff4d704caa126278b6ecf3a55009 385 PANTHER PTHR13370:SF8 29 289 4.2E-49 T 20-04-2016 AMC99_RS08555 424cff4d704caa126278b6ecf3a55009 385 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 250 270 2.8E-37 T 20-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AMC99_RS08555 424cff4d704caa126278b6ecf3a55009 385 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 45 59 2.8E-37 T 20-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AMC99_RS08555 424cff4d704caa126278b6ecf3a55009 385 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 208 225 2.8E-37 T 20-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AMC99_RS08555 424cff4d704caa126278b6ecf3a55009 385 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 94 114 2.8E-37 T 20-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AMC99_RS08555 424cff4d704caa126278b6ecf3a55009 385 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 227 245 2.8E-37 T 20-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AMC99_RS08555 424cff4d704caa126278b6ecf3a55009 385 PANTHER PTHR13370 29 289 4.2E-49 T 20-04-2016 AMC99_RS08555 424cff4d704caa126278b6ecf3a55009 385 SUPERFAMILY SSF53335 24 277 8.99E-73 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_RS08555 424cff4d704caa126278b6ecf3a55009 385 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 49 55 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMC99_RS12490 12e82134ed59d42d218d2925af23d646 275 Gene3D G3DSA:3.40.50.300 47 234 1.5E-8 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12490 12e82134ed59d42d218d2925af23d646 275 PANTHER PTHR13779:SF28 206 272 3.4E-45 T 20-04-2016 AMC99_RS12490 12e82134ed59d42d218d2925af23d646 275 PANTHER PTHR13779:SF28 22 186 3.4E-45 T 20-04-2016 AMC99_RS12490 12e82134ed59d42d218d2925af23d646 275 SUPERFAMILY SSF52540 48 267 1.92E-17 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_RS12490 12e82134ed59d42d218d2925af23d646 275 Pfam PF05673 Protein of unknown function (DUF815) 30 270 3.7E-74 T 20-04-2016 IPR008533 Domain of unknown function DUF815 AMC99_RS12490 12e82134ed59d42d218d2925af23d646 275 PANTHER PTHR13779 206 272 3.4E-45 T 20-04-2016 AMC99_RS12490 12e82134ed59d42d218d2925af23d646 275 PANTHER PTHR13779 22 186 3.4E-45 T 20-04-2016 AMC99_RS06315 6bee3a8eb0c9e2aac2bedec6b7b36461 544 Gene3D G3DSA:2.40.170.20 96 344 1.3E-4 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMC99_RS06315 6bee3a8eb0c9e2aac2bedec6b7b36461 544 SUPERFAMILY SSF56935 65 266 1.01E-8 T 20-04-2016 AMC99_RS06315 6bee3a8eb0c9e2aac2bedec6b7b36461 544 SUPERFAMILY SSF56935 300 370 1.01E-8 T 20-04-2016 AMC99_RS06315 6bee3a8eb0c9e2aac2bedec6b7b36461 544 SUPERFAMILY SSF56935 399 512 1.01E-8 T 20-04-2016 AMC99_RS07115 0c6447019f103a901d7fdb27e025c397 129 SUPERFAMILY SSF52172 5 122 1.21E-29 T 20-04-2016 IPR011006 CheY-like superfamily AMC99_RS07115 0c6447019f103a901d7fdb27e025c397 129 Pfam PF00072 Response regulator receiver domain 9 117 1.4E-21 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS07115 0c6447019f103a901d7fdb27e025c397 129 SMART SM00448 7 117 2.5E-21 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMC99_RS07115 0c6447019f103a901d7fdb27e025c397 129 PANTHER PTHR26402 7 120 2.9E-25 T 20-04-2016 AMC99_RS07115 0c6447019f103a901d7fdb27e025c397 129 Gene3D G3DSA:3.40.50.2300 5 125 6.0E-32 T 20-04-2016 AMC99_RS07115 0c6447019f103a901d7fdb27e025c397 129 PANTHER PTHR26402:SF481 7 120 2.9E-25 T 20-04-2016 AMC99_RS05615 67f964026e0473cc1d1d2829169887cb 158 SUPERFAMILY SSF110087 16 156 1.57E-27 T 20-04-2016 IPR007410 DR1885-like metal-binding protein AMC99_RS05615 67f964026e0473cc1d1d2829169887cb 158 Pfam PF04314 Protein of unknown function (DUF461) 49 146 2.1E-18 T 20-04-2016 IPR007410 DR1885-like metal-binding protein AMC99_RS09980 30c50528d9a19bfdba1b108c4b4dcaee 162 Pfam PF07323 Protein of unknown function (DUF1465) 6 148 2.2E-33 T 20-04-2016 IPR010848 Protein of unknown function DUF1465 AMC99_RS10010 5829a39178b0e229c5436831c308b01f 439 Pfam PF10011 Predicted membrane protein (DUF2254) 14 388 2.6E-110 T 20-04-2016 IPR018723 Protein of unknown function DUF2254, membrane AMC99_RS06035 e9d6014cff40b37130745277fb2f67a3 102 Gene3D G3DSA:1.20.120.160 10 75 9.0E-5 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMC99_RS06035 e9d6014cff40b37130745277fb2f67a3 102 SUPERFAMILY SSF47226 13 96 7.07E-8 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMC99_RS04050 93758ca8f338d9925c4586c2092ddd39 125 SUPERFAMILY SSF54593 3 119 4.16E-22 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS04050 93758ca8f338d9925c4586c2092ddd39 125 Gene3D G3DSA:3.10.180.10 10 119 3.3E-16 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS07675 7e3262545d6276d00e29e5b43db100dd 290 Gene3D G3DSA:1.25.40.10 50 141 1.3E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS07675 7e3262545d6276d00e29e5b43db100dd 290 SUPERFAMILY SSF48452 52 122 1.98E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS07675 7e3262545d6276d00e29e5b43db100dd 290 SMART SM00028 80 113 1.3E-4 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_RS03320 e90df5459c3adf7809b51c5de68f8d95 249 Pfam PF02666 Phosphatidylserine decarboxylase 60 235 5.3E-34 T 20-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 AMC99_RS03320 e90df5459c3adf7809b51c5de68f8d95 249 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 27 239 1.3E-63 T 20-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 AMC99_RS03320 e90df5459c3adf7809b51c5de68f8d95 249 PANTHER PTHR35809 9 242 3.9E-74 T 20-04-2016 AMC99_RS03320 e90df5459c3adf7809b51c5de68f8d95 249 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 20 239 37.629 T 20-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 AMC99_RS13365 7e9f517276b6e1f4a0574715710dd4ee 96 Pfam PF12096 Protein of unknown function (DUF3572) 16 95 2.2E-25 T 20-04-2016 IPR021955 Protein of unknown function DUF3572 AMC99_RS12980 b1660f5b706fbdf7d5c2088bbcbef4f1 265 Gene3D G3DSA:3.40.50.720 78 160 3.3E-4 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12980 b1660f5b706fbdf7d5c2088bbcbef4f1 265 SUPERFAMILY SSF51735 6 264 3.51E-28 T 20-04-2016 IPR016040 NAD(P)-binding domain AMC99_RS12980 b1660f5b706fbdf7d5c2088bbcbef4f1 265 PANTHER PTHR10366:SF430 3 265 1.6E-54 T 20-04-2016 AMC99_RS12980 b1660f5b706fbdf7d5c2088bbcbef4f1 265 Gene3D G3DSA:3.90.25.10 161 264 3.4E-13 T 20-04-2016 AMC99_RS12980 b1660f5b706fbdf7d5c2088bbcbef4f1 265 PANTHER PTHR10366 3 265 1.6E-54 T 20-04-2016 AMC99_RS05865 76e0d650223a98f6b7d16ce3b7766530 427 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 17 64 1.2E-10 T 20-04-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AMC99_RS07950 d77edb2a0ee83ac5a567079731bd53e9 184 Pfam PF05258 Protein of unknown function (DUF721) 32 124 2.5E-14 T 20-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 AMC99_RS07950 d77edb2a0ee83ac5a567079731bd53e9 184 PIRSF PIRSF032064 7 180 1.9E-24 T 20-04-2016 IPR010593 Protein of unknown function DUF1159 AMC99_RS05255 5d9c197a0af5bf2a062fc5aaf3666b50 76 Pfam PF13773 Domain of unknown function (DUF4170) 7 74 9.3E-34 T 20-04-2016 IPR025226 Protein of unknown function DUF4170 AMC99_RS06420 041177d41ea359100eb160795169593c 327 Pfam PF14378 PAP2 superfamily 116 300 9.8E-21 T 20-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 AMC99_RS06745 13bb3c535ca8db7d5917731f85716424 360 Pfam PF11017 Protein of unknown function (DUF2855) 37 350 7.9E-96 T 20-04-2016 IPR021276 Protein of unknown function DUF2855 AMC99_RS06745 13bb3c535ca8db7d5917731f85716424 360 Gene3D G3DSA:3.90.180.10 13 104 4.9E-6 T 20-04-2016 IPR011032 GroES-like AMC99_RS06745 13bb3c535ca8db7d5917731f85716424 360 SUPERFAMILY SSF50129 12 100 3.77E-5 T 20-04-2016 IPR011032 GroES-like AMC99_RS09405 492e1eaee0e29342cfc70cd4f55c22d2 212 Pfam PF09476 Pilus biogenesis CpaD protein (pilus_cpaD) 15 196 1.9E-40 T 20-04-2016 IPR019027 Pilus biogenesis CpaD-related AMC99_RS12090 7cf10771a3eb7e6339d90091d5a490cb 312 SUPERFAMILY SSF51261 111 306 3.84E-48 T 20-04-2016 IPR011055 Duplicated hybrid motif AMC99_RS12090 7cf10771a3eb7e6339d90091d5a490cb 312 PANTHER PTHR21666 156 311 2.0E-36 T 20-04-2016 AMC99_RS12090 7cf10771a3eb7e6339d90091d5a490cb 312 Pfam PF01551 Peptidase family M23 208 304 2.0E-26 T 20-04-2016 IPR016047 Peptidase M23 AMC99_RS12090 7cf10771a3eb7e6339d90091d5a490cb 312 Gene3D G3DSA:2.70.70.10 172 308 2.4E-40 T 20-04-2016 AMC99_RS02060 e3a5435be01b1763f422f0658cb95383 478 PANTHER PTHR11328:SF24 1 474 3.1E-49 T 20-04-2016 AMC99_RS02060 e3a5435be01b1763f422f0658cb95383 478 PANTHER PTHR11328 1 474 3.1E-49 T 20-04-2016 AMC99_RS02060 e3a5435be01b1763f422f0658cb95383 478 SUPERFAMILY SSF103473 16 453 1.14E-24 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS02060 e3a5435be01b1763f422f0658cb95383 478 Pfam PF13347 MFS/sugar transport protein 16 452 1.1E-103 T 20-04-2016 AMC99_RS02060 e3a5435be01b1763f422f0658cb95383 478 Gene3D G3DSA:1.20.1250.20 237 446 5.3E-4 T 20-04-2016 AMC99_RS02060 e3a5435be01b1763f422f0658cb95383 478 Gene3D G3DSA:1.20.1250.20 20 210 1.5E-10 T 20-04-2016 AMC99_RS12160 492402b0e6113aadaef2ebfde5b9688e 250 SUPERFAMILY SSF101960 58 245 6.93E-50 T 20-04-2016 AMC99_RS12160 492402b0e6113aadaef2ebfde5b9688e 250 PANTHER PTHR30508:SF0 59 250 1.1E-42 T 20-04-2016 AMC99_RS12160 492402b0e6113aadaef2ebfde5b9688e 250 PANTHER PTHR30508 59 250 1.1E-42 T 20-04-2016 AMC99_RS12160 492402b0e6113aadaef2ebfde5b9688e 250 Pfam PF01458 Uncharacterized protein family (UPF0051) 57 221 2.5E-42 T 20-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AMC99_RS02990 2e39174ddbb24778ac68f585fdaec1e1 447 PANTHER PTHR22935:SF2 32 445 4.1E-86 T 20-04-2016 AMC99_RS02990 2e39174ddbb24778ac68f585fdaec1e1 447 SUPERFAMILY SSF56601 63 444 9.81E-86 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS02990 2e39174ddbb24778ac68f585fdaec1e1 447 Gene3D G3DSA:3.40.710.10 139 420 4.6E-45 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMC99_RS02990 2e39174ddbb24778ac68f585fdaec1e1 447 Pfam PF00144 Beta-lactamase 140 419 9.9E-30 T 20-04-2016 IPR001466 Beta-lactamase-related AMC99_RS02990 2e39174ddbb24778ac68f585fdaec1e1 447 PANTHER PTHR22935 32 445 4.1E-86 T 20-04-2016 AMC99_RS11210 64d432be6827fede61dcbd3f8f5fbae5 198 Pfam PF14352 Domain of unknown function (DUF4402) 60 196 1.4E-16 T 20-04-2016 IPR025514 Protein of unknown function DUF4402 AMC99_RS06250 9b93baeaf2101edd29aa5c553848accc 450 Pfam PF01943 Polysaccharide biosynthesis protein 19 285 2.4E-7 T 20-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AMC99_RS04945 86e44b967a7d3460f3a75ad1b6cba353 243 Pfam PF06904 Extensin-like protein C-terminus 73 242 1.9E-51 T 20-04-2016 IPR009683 Extensin-like, C-terminal AMC99_RS10800 ff44a457886b438d2ee54843ec351b26 245 Gene3D G3DSA:3.30.1150.10 135 225 5.2E-5 T 20-04-2016 AMC99_RS10800 ff44a457886b438d2ee54843ec351b26 245 SUPERFAMILY SSF74653 141 236 4.05E-6 T 20-04-2016 AMC99_RS02965 85747e03ee223090dd2d1a2862b9fb67 175 SUPERFAMILY SSF53254 3 165 1.91E-23 T 20-04-2016 IPR029033 Histidine phosphatase superfamily AMC99_RS02965 85747e03ee223090dd2d1a2862b9fb67 175 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 66 4.4E-8 T 20-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMC99_RS02965 85747e03ee223090dd2d1a2862b9fb67 175 Gene3D G3DSA:3.40.50.1240 4 167 8.2E-43 T 20-04-2016 IPR029033 Histidine phosphatase superfamily AMC99_RS02925 d22d1ffbf521daaa245240bfdb839ceb 99 Gene3D G3DSA:3.30.70.900 1 92 2.7E-25 T 20-04-2016 AMC99_RS02925 d22d1ffbf521daaa245240bfdb839ceb 99 SUPERFAMILY SSF54909 1 82 4.16E-25 T 20-04-2016 IPR011008 Dimeric alpha-beta barrel AMC99_RS02925 d22d1ffbf521daaa245240bfdb839ceb 99 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 3.8E-16 T 20-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain AMC99_RS02925 d22d1ffbf521daaa245240bfdb839ceb 99 PANTHER PTHR33336 1 96 1.7E-18 T 20-04-2016 AMC99_RS12840 95fc24c8bfc9e5f6a4c22c9405d1b1dc 88 PANTHER PTHR33884 1 88 1.6E-20 T 20-04-2016 AMC99_RS12840 95fc24c8bfc9e5f6a4c22c9405d1b1dc 88 Pfam PF04226 Transglycosylase associated protein 33 84 7.0E-12 T 20-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 AMC99_RS11840 c173374345ea95625c6c589a04ea81f3 534 Gene3D G3DSA:3.50.50.60 13 113 1.6E-29 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11840 c173374345ea95625c6c589a04ea81f3 534 Gene3D G3DSA:3.50.50.60 218 324 1.6E-29 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_RS11840 c173374345ea95625c6c589a04ea81f3 534 PANTHER PTHR10742 15 468 1.4E-123 T 20-04-2016 AMC99_RS11840 c173374345ea95625c6c589a04ea81f3 534 PANTHER PTHR10742:SF279 15 468 1.4E-123 T 20-04-2016 AMC99_RS11840 c173374345ea95625c6c589a04ea81f3 534 Pfam PF13450 NAD(P)-binding Rossmann-like domain 18 83 3.8E-14 T 20-04-2016 AMC99_RS11840 c173374345ea95625c6c589a04ea81f3 534 SUPERFAMILY SSF51971 14 299 6.12E-44 T 20-04-2016 AMC99_RS11840 c173374345ea95625c6c589a04ea81f3 534 SUPERFAMILY SSF51971 434 475 6.12E-44 T 20-04-2016 AMC99_RS01350 db5aeaf3fd3581e93529d7fc4cf6ea28 225 PANTHER PTHR38477:SF1 30 197 7.3E-34 T 20-04-2016 AMC99_RS01350 db5aeaf3fd3581e93529d7fc4cf6ea28 225 PANTHER PTHR38477 30 197 7.3E-34 T 20-04-2016 AMC99_RS01350 db5aeaf3fd3581e93529d7fc4cf6ea28 225 Pfam PF13645 L,D-transpeptidase catalytic domain 37 197 2.3E-39 T 20-04-2016 IPR032676 Putative L,D-transpeptidase catalytic domain AMC99_RS07605 4ad52f632d73f6890f4780bb1e55d5db 474 PANTHER PTHR30026 39 442 2.3E-44 T 20-04-2016 AMC99_RS07605 4ad52f632d73f6890f4780bb1e55d5db 474 Pfam PF02321 Outer membrane efflux protein 40 231 5.0E-22 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMC99_RS07605 4ad52f632d73f6890f4780bb1e55d5db 474 Pfam PF02321 Outer membrane efflux protein 252 435 1.5E-23 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMC99_RS07605 4ad52f632d73f6890f4780bb1e55d5db 474 SUPERFAMILY SSF56954 1 438 8.76E-70 T 20-04-2016 AMC99_RS07605 4ad52f632d73f6890f4780bb1e55d5db 474 PANTHER PTHR30026:SF4 39 442 2.3E-44 T 20-04-2016 AMC99_RS07605 4ad52f632d73f6890f4780bb1e55d5db 474 Gene3D G3DSA:1.20.1600.10 38 434 2.2E-54 T 20-04-2016 AMC99_RS12140 7b7ee7ace9dab803af7c0ceed51ab209 165 SUPERFAMILY SSF55729 17 145 1.03E-27 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS12140 7b7ee7ace9dab803af7c0ceed51ab209 165 Gene3D G3DSA:3.40.630.30 10 145 9.9E-30 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS12140 7b7ee7ace9dab803af7c0ceed51ab209 165 PANTHER PTHR10545 57 148 2.8E-19 T 20-04-2016 AMC99_RS12140 7b7ee7ace9dab803af7c0ceed51ab209 165 Pfam PF00583 Acetyltransferase (GNAT) family 65 145 9.5E-16 T 20-04-2016 IPR000182 GNAT domain GO:0008080 AMC99_RS08490 36d1948b1673c1592df3a644cc41c75e 328 PANTHER PTHR10361:SF28 1 318 1.7E-88 T 20-04-2016 AMC99_RS08490 36d1948b1673c1592df3a644cc41c75e 328 Pfam PF01758 Sodium Bile acid symporter family 45 222 6.6E-35 T 20-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AMC99_RS08490 36d1948b1673c1592df3a644cc41c75e 328 PANTHER PTHR10361 1 318 1.7E-88 T 20-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AMC99_RS09775 33bea36d71e986f7ed56c236b12ec6f3 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 138 2.2E-5 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS09775 33bea36d71e986f7ed56c236b12ec6f3 712 Gene3D G3DSA:2.170.130.10 50 142 2.1E-8 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMC99_RS09775 33bea36d71e986f7ed56c236b12ec6f3 712 SUPERFAMILY SSF56935 57 706 6.41E-31 T 20-04-2016 AMC99_RS09070 4c86a66ff514937bab8ab892d9da2316 573 Pfam PF05036 Sporulation related domain 487 559 3.3E-5 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMC99_RS09070 4c86a66ff514937bab8ab892d9da2316 573 Gene3D G3DSA:1.25.40.10 60 217 8.5E-12 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS09070 4c86a66ff514937bab8ab892d9da2316 573 SUPERFAMILY SSF48452 59 224 1.11E-13 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS08650 80edbc27578b1b9fff8352112dfa86bd 129 SUPERFAMILY SSF158634 1 128 4.45E-41 T 20-04-2016 AMC99_RS08650 80edbc27578b1b9fff8352112dfa86bd 129 Pfam PF12200 Domain of unknown function (DUF3597) 3 124 1.6E-38 T 20-04-2016 IPR022016 Domain of unknown function DUF3597 AMC99_RS11115 78f231e16f1f8e7fc8e630e47915273c 97 Pfam PF02325 YGGT family 14 90 1.2E-13 T 20-04-2016 IPR003425 CCB3/YggT GO:0016020 AMC99_RS10395 a5b6f9866185f9e23a2fd25b8478ea86 152 Pfam PF04355 SmpA / OmlA family 30 104 2.6E-14 T 20-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AMC99_RS05055 d3fc6cf333279344497dd59d6cf304ca 114 Pfam PF11720 Peptidase inhibitor I78 family 49 114 1.8E-7 T 20-04-2016 IPR021719 Proteinase inhibitor I78 AMC99_RS11160 4cb8d2bbf4a350111ba474c32b8f4063 81 Pfam PF09939 Uncharacterized protein conserved in bacteria (DUF2171) 7 63 1.5E-21 T 20-04-2016 IPR018684 Protein of unknown function DUF2171 AMC99_RS01460 08c833f48b3bf3df461823cc343de92f 362 SUPERFAMILY SSF159245 13 234 1.83E-12 T 20-04-2016 AMC99_RS02955 b1129fca0108ab212f494103898c6d3f 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 119 3.6E-7 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_RS02955 b1129fca0108ab212f494103898c6d3f 123 SUPERFAMILY SSF54593 4 122 5.78E-24 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS02955 b1129fca0108ab212f494103898c6d3f 123 Gene3D G3DSA:3.10.180.10 8 122 7.2E-19 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_RS00315 7f3dcb4f5109fca3dd0a2a17801109d6 903 Pfam PF07916 TraG-like protein, N-terminal region 3 460 8.5E-124 T 20-04-2016 IPR012931 TraG-like, N-terminal AMC99_RS13225 6d0c7cfbb5658dfd3af0976ee26c58c7 123 Pfam PF06803 Protein of unknown function (DUF1232) 31 67 7.5E-13 T 20-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 AMC99_RS02590 8c57c8ccf429fcd8959b324688f849b3 360 SUPERFAMILY SSF55729 167 314 4.4E-12 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMC99_RS02590 8c57c8ccf429fcd8959b324688f849b3 360 Pfam PF13480 Acetyltransferase (GNAT) domain 176 307 3.9E-20 T 20-04-2016 AMC99_RS04000 354fb2e4181bd2629e3be212f9514bee 181 Pfam PF12276 Protein of unknown function (DUF3617) 8 181 1.6E-32 T 20-04-2016 IPR022061 Protein of unknown function DUF3617 AMC99_RS10665 fdab08bbe35937e4dc09a7f4eeee2a60 252 SUPERFAMILY SSF81901 41 187 3.66E-13 T 20-04-2016 AMC99_RS10665 fdab08bbe35937e4dc09a7f4eeee2a60 252 Gene3D G3DSA:1.25.40.10 40 150 8.4E-14 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS10245 9c8683dfcef01bbdaf9865a40f9f5b0d 324 Pfam PF13646 HEAT repeats 204 288 3.6E-11 T 20-04-2016 AMC99_RS10245 9c8683dfcef01bbdaf9865a40f9f5b0d 324 SMART SM00567 E-Z type HEAT repeats 278 306 24.0 T 20-04-2016 IPR004155 PBS lyase HEAT-like repeat AMC99_RS10245 9c8683dfcef01bbdaf9865a40f9f5b0d 324 SMART SM00567 E-Z type HEAT repeats 247 276 0.015 T 20-04-2016 IPR004155 PBS lyase HEAT-like repeat AMC99_RS10245 9c8683dfcef01bbdaf9865a40f9f5b0d 324 SMART SM00567 E-Z type HEAT repeats 184 211 760.0 T 20-04-2016 IPR004155 PBS lyase HEAT-like repeat AMC99_RS10245 9c8683dfcef01bbdaf9865a40f9f5b0d 324 SMART SM00567 E-Z type HEAT repeats 216 245 150.0 T 20-04-2016 IPR004155 PBS lyase HEAT-like repeat AMC99_RS10245 9c8683dfcef01bbdaf9865a40f9f5b0d 324 Gene3D G3DSA:1.25.10.10 199 318 4.1E-18 T 20-04-2016 IPR011989 Armadillo-like helical AMC99_RS10245 9c8683dfcef01bbdaf9865a40f9f5b0d 324 Gene3D G3DSA:1.25.10.10 81 143 4.1E-18 T 20-04-2016 IPR011989 Armadillo-like helical AMC99_RS10245 9c8683dfcef01bbdaf9865a40f9f5b0d 324 SUPERFAMILY SSF48371 78 139 1.54E-19 T 20-04-2016 IPR016024 Armadillo-type fold GO:0005488 AMC99_RS10245 9c8683dfcef01bbdaf9865a40f9f5b0d 324 SUPERFAMILY SSF48371 173 319 1.54E-19 T 20-04-2016 IPR016024 Armadillo-type fold GO:0005488 AMC99_RS00385 cad1a5f8bc2dcb2b71493ca88115f64e 271 Pfam PF06586 TraK protein 37 262 1.1E-50 T 20-04-2016 IPR010563 Pilus assembly TraK AMC99_RS03490 777d72988069bbf135a1c8f9e7e4dc0f 56 SUPERFAMILY SSF69047 6 48 3.4E-6 T 20-04-2016 IPR008462 CsbD-like AMC99_RS03490 777d72988069bbf135a1c8f9e7e4dc0f 56 Gene3D G3DSA:1.10.1470.10 6 49 1.7E-5 T 20-04-2016 IPR008462 CsbD-like AMC99_RS01700 974ad1b3a0c115463d8a113e58f7e6e8 89 Gene3D G3DSA:3.30.10.10 41 85 3.4E-5 T 20-04-2016 AMC99_RS01700 974ad1b3a0c115463d8a113e58f7e6e8 89 Pfam PF11720 Peptidase inhibitor I78 family 25 89 1.2E-11 T 20-04-2016 IPR021719 Proteinase inhibitor I78 AMC99_RS02785 5b603a33b2719594224740d571dc8a44 172 Pfam PF02104 SURF1 family 1 154 6.5E-12 T 20-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 AMC99_RS08710 2e4b094a37e6fe77f0e3748299e5a1fb 132 Pfam PF03860 Domain of Unknown Function (DUF326) 105 123 2.3E-6 T 20-04-2016 IPR005560 Protein of unknown function DUF326 AMC99_RS05420 e4b4deb7150ea10b00cb602fed60cc89 268 Gene3D G3DSA:3.40.50.2020 70 244 3.7E-28 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like AMC99_RS05420 e4b4deb7150ea10b00cb602fed60cc89 268 SUPERFAMILY SSF53271 69 246 2.62E-26 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like AMC99_RS05420 e4b4deb7150ea10b00cb602fed60cc89 268 PANTHER PTHR11907:SF9 17 262 2.6E-45 T 20-04-2016 AMC99_RS05420 e4b4deb7150ea10b00cb602fed60cc89 268 Pfam PF00156 Phosphoribosyl transferase domain 188 246 7.6E-10 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMC99_RS05420 e4b4deb7150ea10b00cb602fed60cc89 268 PANTHER PTHR11907 17 262 2.6E-45 T 20-04-2016 AMC99_RS02145 c38bc0a83853efb549c0ac14c7e6de20 259 Gene3D G3DSA:3.30.1150.10 143 242 8.8E-10 T 20-04-2016 AMC99_RS04265 a4ec081146857c0315ac20797275a10e 73 Pfam PF09834 Predicted membrane protein (DUF2061) 15 65 2.9E-24 T 20-04-2016 IPR018638 Domain of unknown function DUF2061, membrane AMC99_RS06995 eeb7edf042f168df0f5c55b97f36ea8c 129 Pfam PF07027 Protein of unknown function (DUF1318) 28 116 3.6E-24 T 20-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 AMC99_RS04890 bfdf39a468414eda4f79eb7987e74003 328 PANTHER PTHR18640:SF9 7 320 5.4E-42 T 20-04-2016 AMC99_RS04890 bfdf39a468414eda4f79eb7987e74003 328 PANTHER PTHR18640 7 320 5.4E-42 T 20-04-2016 IPR016833 Putative sodium bile acid cotransporter AMC99_RS04890 bfdf39a468414eda4f79eb7987e74003 328 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 11 317 4.2E-67 T 20-04-2016 IPR016833 Putative sodium bile acid cotransporter AMC99_RS05445 a6634df0e74051a9c9668e2388bca5ab 310 Pfam PF14378 PAP2 superfamily 103 295 1.8E-23 T 20-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 AMC99_RS02695 5285c715dc2d83f2fb61b9fd91fa70d6 150 SUPERFAMILY SSF54637 9 144 6.91E-21 T 20-04-2016 IPR029069 HotDog domain AMC99_RS02695 5285c715dc2d83f2fb61b9fd91fa70d6 150 PANTHER PTHR12418:SF28 26 145 2.7E-16 T 20-04-2016 AMC99_RS02695 5285c715dc2d83f2fb61b9fd91fa70d6 150 Gene3D G3DSA:3.10.129.10 14 142 3.1E-20 T 20-04-2016 IPR029069 HotDog domain AMC99_RS02695 5285c715dc2d83f2fb61b9fd91fa70d6 150 Pfam PF03061 Thioesterase superfamily 62 129 9.6E-8 T 20-04-2016 IPR006683 Thioesterase domain AMC99_RS02695 5285c715dc2d83f2fb61b9fd91fa70d6 150 PANTHER PTHR12418 26 145 2.7E-16 T 20-04-2016 AMC99_RS11055 0228f8e23631046fe9d6e1f4afadf6fe 96 Gene3D G3DSA:3.30.70.1060 1 89 5.0E-12 T 20-04-2016 AMC99_RS11055 0228f8e23631046fe9d6e1f4afadf6fe 96 Pfam PF03795 YCII-related domain 13 83 4.6E-7 T 20-04-2016 IPR005545 YCII-related AMC99_RS11055 0228f8e23631046fe9d6e1f4afadf6fe 96 SUPERFAMILY SSF54909 18 89 1.8E-9 T 20-04-2016 IPR011008 Dimeric alpha-beta barrel AMC99_RS03010 cadf5ba0a140ec13df84ce38debe632c 149 SUPERFAMILY SSF46785 64 110 1.51E-5 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS03010 cadf5ba0a140ec13df84ce38debe632c 149 Gene3D G3DSA:1.10.10.10 67 109 1.4E-5 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS09350 7a6a44cfe205b56a9bec97be7d088c83 220 Pfam PF05036 Sporulation related domain 144 219 1.2E-6 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMC99_RS03210 ba59b1f335042efeeb22c692bfaded5d 238 PANTHER PTHR34387:SF1 1 238 8.5E-41 T 20-04-2016 AMC99_RS03210 ba59b1f335042efeeb22c692bfaded5d 238 Pfam PF04402 Protein of unknown function (DUF541) 34 235 4.8E-41 T 20-04-2016 IPR007497 Protein of unknown function DUF541 AMC99_RS03210 ba59b1f335042efeeb22c692bfaded5d 238 PANTHER PTHR34387 1 238 8.5E-41 T 20-04-2016 AMC99_RS11365 a5070edebe7a4b555d251cbeeb4f8679 122 PIRSF PIRSF009151 1 122 2.9E-57 T 20-04-2016 IPR008497 Protein of unknown function DUF779 AMC99_RS11365 a5070edebe7a4b555d251cbeeb4f8679 122 Pfam PF05610 Protein of unknown function (DUF779) 16 108 3.4E-42 T 20-04-2016 IPR008497 Protein of unknown function DUF779 AMC99_RS03485 d9885a0c075664835901674b5a66cb60 130 Pfam PF01878 EVE domain 1 127 9.6E-39 T 20-04-2016 IPR002740 EVE domain AMC99_RS03485 d9885a0c075664835901674b5a66cb60 130 SUPERFAMILY SSF88697 1 129 3.23E-43 T 20-04-2016 IPR015947 PUA-like domain AMC99_RS03485 d9885a0c075664835901674b5a66cb60 130 Gene3D G3DSA:3.10.590.10 2 127 1.9E-18 T 20-04-2016 IPR002740 EVE domain AMC99_RS03485 d9885a0c075664835901674b5a66cb60 130 PANTHER PTHR14087 1 129 2.8E-45 T 20-04-2016 AMC99_RS13645 ef859fe7b05246854f557b649d3eac9d 468 PANTHER PTHR11206:SF95 16 459 4.1E-87 T 20-04-2016 AMC99_RS13645 ef859fe7b05246854f557b649d3eac9d 468 PIRSF PIRSF006603 19 462 2.1E-52 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMC99_RS13645 ef859fe7b05246854f557b649d3eac9d 468 TIGRFAM TIGR00797 matE: MATE efflux family protein 30 437 3.3E-65 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMC99_RS13645 ef859fe7b05246854f557b649d3eac9d 468 Pfam PF01554 MatE 30 190 2.2E-22 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMC99_RS13645 ef859fe7b05246854f557b649d3eac9d 468 Pfam PF01554 MatE 258 417 4.6E-26 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMC99_RS13645 ef859fe7b05246854f557b649d3eac9d 468 PANTHER PTHR11206 16 459 4.1E-87 T 20-04-2016 AMC99_RS12720 89c9afbd607fae5009c8be9197c33511 403 Pfam PF13579 Glycosyl transferase 4-like domain 21 181 1.6E-10 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMC99_RS12720 89c9afbd607fae5009c8be9197c33511 403 SUPERFAMILY SSF53756 4 397 6.91E-31 T 20-04-2016 AMC99_RS01410 f1e2df871ef5450eb0e5cbee201d4abe 354 PANTHER PTHR35337 20 354 3.1E-27 T 20-04-2016 AMC99_RS01410 f1e2df871ef5450eb0e5cbee201d4abe 354 Pfam PF01944 Stage II sporulation protein M 137 316 1.6E-29 T 20-04-2016 IPR002798 Stage II sporulation protein M-like AMC99_RS10770 d6181ce29990dcc6682636b0f3413206 406 Pfam PF05816 Toxic anion resistance protein (TelA) 67 383 4.4E-97 T 20-04-2016 IPR008863 Toxic anion resistance AMC99_RS10770 d6181ce29990dcc6682636b0f3413206 406 PANTHER PTHR38432:SF1 14 393 2.1E-80 T 20-04-2016 AMC99_RS10770 d6181ce29990dcc6682636b0f3413206 406 PANTHER PTHR38432 14 393 2.1E-80 T 20-04-2016 AMC99_RS00290 e995bb2fe295cb7d2a78d6b2243a6607 173 SUPERFAMILY SSF52980 3 151 1.23E-53 T 20-04-2016 IPR011335 Restriction endonuclease type II-like AMC99_RS00290 e995bb2fe295cb7d2a78d6b2243a6607 173 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 4.6E-47 T 20-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMC99_RS00290 e995bb2fe295cb7d2a78d6b2243a6607 173 Gene3D G3DSA:3.40.960.10 21 152 4.0E-50 T 20-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMC99_RS00290 e995bb2fe295cb7d2a78d6b2243a6607 173 Pfam PF03852 DNA mismatch endonuclease Vsr 3 74 5.4E-33 T 20-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMC99_RS02525 79b22b0919bca41d6044708353af01c4 324 Pfam PF10150 Ribonuclease E/G family 143 240 1.6E-7 T 20-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AMC99_RS08955 835727cf3fd8e7bdfd2d87c813813f33 74 SUPERFAMILY SSF46955 24 72 5.86E-5 T 20-04-2016 IPR009061 Putative DNA-binding domain AMC99_RS05350 2c51609b2111b6ac34d53d962a9eea30 538 SUPERFAMILY SSF53187 48 92 9.63E-55 T 20-04-2016 AMC99_RS05350 2c51609b2111b6ac34d53d962a9eea30 538 SUPERFAMILY SSF53187 279 369 9.63E-55 T 20-04-2016 AMC99_RS05350 2c51609b2111b6ac34d53d962a9eea30 538 SUPERFAMILY SSF53187 397 512 9.63E-55 T 20-04-2016 AMC99_RS05350 2c51609b2111b6ac34d53d962a9eea30 538 Gene3D G3DSA:3.40.630.10 45 96 9.8E-62 T 20-04-2016 AMC99_RS05350 2c51609b2111b6ac34d53d962a9eea30 538 Gene3D G3DSA:3.40.630.10 286 513 9.8E-62 T 20-04-2016 AMC99_RS05350 2c51609b2111b6ac34d53d962a9eea30 538 PANTHER PTHR12053 242 367 8.3E-37 T 20-04-2016 AMC99_RS05350 2c51609b2111b6ac34d53d962a9eea30 538 PANTHER PTHR12053 394 518 8.3E-37 T 20-04-2016 AMC99_RS05350 2c51609b2111b6ac34d53d962a9eea30 538 Pfam PF04389 Peptidase family M28 287 502 5.0E-32 T 20-04-2016 IPR007484 Peptidase M28 AMC99_RS05350 2c51609b2111b6ac34d53d962a9eea30 538 PANTHER PTHR12053:SF3 242 367 8.3E-37 T 20-04-2016 AMC99_RS05350 2c51609b2111b6ac34d53d962a9eea30 538 PANTHER PTHR12053:SF3 394 518 8.3E-37 T 20-04-2016 AMC99_RS06660 18fd422184d27508f52cabcf7db5a18f 64 Pfam PF04964 Flp/Fap pilin component 9 52 1.3E-15 T 20-04-2016 IPR007047 Flp/Fap pilin component AMC99_RS07640 7e22cf475934dfa8d41c79545fdc12d3 553 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 16 62 4.6E-12 T 20-04-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AMC99_RS10285 01e9278c4fb1b4331aac4134affb1a12 291 Pfam PF11231 Protein of unknown function (DUF3034) 36 288 1.2E-92 T 20-04-2016 IPR021393 Protein of unknown function DUF3034 AMC99_RS01580 335e1d5dd209c0af589adb49898f9461 168 Gene3D G3DSA:1.10.10.10 6 33 5.8E-4 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMC99_RS08095 155799d6caa5abe325c543277eb0f9dd 302 Pfam PF02517 CAAX protease self-immunity 128 221 2.2E-17 T 20-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 AMC99_RS08095 155799d6caa5abe325c543277eb0f9dd 302 PANTHER PTHR39430 9 298 3.2E-37 T 20-04-2016 AMC99_RS00340 7d59e4e37d067d979dcb441f71eb3172 337 Pfam PF06834 TraU protein 34 336 1.8E-108 T 20-04-2016 IPR009649 TraU AMC99_RS07900 24ba36dbf37dfa242af6fe39e4f8eff5 151 SUPERFAMILY SSF81301 6 150 1.37E-14 T 20-04-2016 AMC99_RS12170 6f48d03e169118140da84efcaf972bb6 178 Pfam PF04480 Protein of unknown function (DUF559) 37 138 2.8E-15 T 20-04-2016 IPR007569 Domain of unknown function DUF559 AMC99_RS01195 0e7b087c9130e97c6be43226b7aa07fb 132 Pfam PF14248 Domain of unknown function (DUF4345) 4 116 4.2E-7 T 20-04-2016 IPR025597 Protein of unknown function DUF4345 AMC99_RS09200 cfa82debcc4c5dba6fa8aaad6231827f 445 Pfam PF13520 Amino acid permease 18 423 1.7E-47 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS09200 cfa82debcc4c5dba6fa8aaad6231827f 445 PIRSF PIRSF006060 1 444 2.1E-66 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS09200 cfa82debcc4c5dba6fa8aaad6231827f 445 PANTHER PTHR11785 1 425 1.5E-72 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS05275 8771eaa135f1f4967aa61cdc42f0d170 191 SUPERFAMILY SSF58113 25 150 3.01E-5 T 20-04-2016 AMC99_RS11000 5b201fd9f7eea3fdbca6d14a4ade519d 176 ProDom PD207074 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED RC1356 RP875 29 170 5.0E-5 T 20-04-2016 AMC99_RS11000 5b201fd9f7eea3fdbca6d14a4ade519d 176 Gene3D G3DSA:3.40.50.620 92 147 7.3E-6 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_RS11000 5b201fd9f7eea3fdbca6d14a4ade519d 176 Pfam PF02698 DUF218 domain 34 139 3.2E-8 T 20-04-2016 IPR003848 Domain of unknown function DUF218 AMC99_RS00205 c92ab2d739b03d259401a5202353d43f 355 Pfam PF13365 Trypsin-like peptidase domain 34 188 1.5E-11 T 20-04-2016 AMC99_RS00205 c92ab2d739b03d259401a5202353d43f 355 SUPERFAMILY SSF50494 7 213 2.51E-15 T 20-04-2016 IPR009003 Peptidase S1, PA clan AMC99_RS00205 c92ab2d739b03d259401a5202353d43f 355 Gene3D G3DSA:2.40.10.10 18 103 4.8E-7 T 20-04-2016 AMC99_RS07745 e8881aa0d02a3e19a8f39f43d445bcb5 83 Pfam PF04380 Membrane fusogenic activity 3 78 4.7E-22 T 20-04-2016 IPR007475 Membrane fusogenic activity AMC99_RS04765 d18c63411b504fc42382b5e9a8ed5036 68 Gene3D G3DSA:1.20.58.60 11 64 3.0E-4 T 20-04-2016 AMC99_RS05525 c09ea244e1611e2a53ee9046a6e9c826 154 Pfam PF07811 TadE-like protein 30 72 1.6E-7 T 20-04-2016 IPR012495 TadE-like AMC99_RS07280 e23648378112543247b0186a56ff21b9 171 Pfam PF14280 Domain of unknown function (DUF4365) 11 158 1.9E-17 T 20-04-2016 IPR025375 Domain of unknown function DUF4365 AMC99_RS01005 68d30b0dfb7f56d4763d63724e1c9f67 235 SUPERFAMILY SSF51445 45 213 2.0E-23 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily AMC99_RS01005 68d30b0dfb7f56d4763d63724e1c9f67 235 Pfam PF01183 Glycosyl hydrolases family 25 59 198 5.2E-14 T 20-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 AMC99_RS01005 68d30b0dfb7f56d4763d63724e1c9f67 235 Gene3D G3DSA:3.20.20.80 48 213 1.4E-21 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMC99_RS00355 27511c4dcce3237289a1467304799f68 108 Pfam PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) 1 102 7.4E-32 T 20-04-2016 IPR014115 Type-F conjugative transfer system protein TrbI AMC99_RS04255 dc18916fa75bd1e3cf2ade4679d9033b 119 Pfam PF10984 Protein of unknown function (DUF2794) 24 108 5.6E-37 T 20-04-2016 IPR021252 Protein of unknown function DUF2794 AMC99_RS09155 ad140f08114a2a95150956539fa82969 167 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 6 141 1.0E-6 T 20-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMC99_RS09155 ad140f08114a2a95150956539fa82969 167 SUPERFAMILY SSF89447 15 148 7.32E-17 T 20-04-2016 AMC99_RS12730 9d31f9c8f0b0b94440975c2cb6bda50f 266 Pfam PF04230 Polysaccharide pyruvyl transferase 90 201 4.6E-10 T 20-04-2016 IPR007345 Polysaccharide pyruvyl transferase AMC99_RS13340 f0d69bc8e2af371aaaf3e4e010683774 283 Pfam PF04116 Fatty acid hydroxylase superfamily 84 232 9.4E-24 T 20-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 AMC99_RS12585 7dd385cbef3f5d1e809b2c4bf6cc010f 67 Pfam PF06698 Protein of unknown function (DUF1192) 3 63 4.7E-21 T 20-04-2016 IPR009579 Protein of unknown function DUF1192 AMC99_RS12460 536465db70706446c0b49b53978ac628 209 Pfam PF14352 Domain of unknown function (DUF4402) 43 208 4.8E-13 T 20-04-2016 IPR025514 Protein of unknown function DUF4402 AMC99_RS00270 8c00c10cb93de0e1cc7d486a15ff9c49 274 SMART SM00507 189 252 0.0021 T 20-04-2016 IPR003615 HNH nuclease AMC99_RS00270 8c00c10cb93de0e1cc7d486a15ff9c49 274 Pfam PF01844 HNH endonuclease 213 257 8.4E-6 T 20-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AMC99_RS10645 33f1ea09bc0a0d99c14127aa88ef6c9b 324 Pfam PF01522 Polysaccharide deacetylase 3 167 1.4E-6 T 20-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_RS10645 33f1ea09bc0a0d99c14127aa88ef6c9b 324 Gene3D G3DSA:3.20.20.370 43 174 7.5E-10 T 20-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_RS10645 33f1ea09bc0a0d99c14127aa88ef6c9b 324 SUPERFAMILY SSF88713 41 282 1.08E-14 T 20-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_RS05015 6ec0a196355e06bc414cb74325c55b46 137 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 21 71 1.7E-7 T 20-04-2016 IPR032871 AHH domain-containing protein AMC99_RS03265 debb1697bf23b63ecbade3c4ecd617b9 161 Pfam PF13826 Domain of unknown function (DUF4188) 16 135 1.3E-42 T 20-04-2016 IPR025444 Protein of unknown function DUF4188 AMC99_RS00810 041462685c7d1b9d2728e7689a5dd88c 442 Pfam PF04932 O-Antigen ligase 224 369 3.2E-12 T 20-04-2016 IPR007016 O-antigen ligase-related AMC99_RS13685 144d4dd8c8c03338b727708ea16cce60 175 Pfam PF11188 Protein of unknown function (DUF2975) 54 175 2.0E-12 T 20-04-2016 IPR021354 Protein of unknown function DUF2975 AMC99_RS01790 0e29c4b58e17705d3f6fac6fb436be03 186 SUPERFAMILY SSF103473 6 181 8.11E-5 T 20-04-2016 IPR020846 Major facilitator superfamily domain AMC99_RS11665 faee37f2c06db943b1bdb1d6e42d979f 150 Pfam PF12100 Domain of unknown function (DUF3576) 45 144 3.2E-41 T 20-04-2016 IPR021959 Protein of unknown function DUF3576 AMC99_RS03065 3e506342c82d024a3d77801bf2e547ef 145 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 138 1.8E-12 T 20-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AMC99_RS03065 3e506342c82d024a3d77801bf2e547ef 145 SUPERFAMILY SSF54534 4 142 1.16E-31 T 20-04-2016 AMC99_RS03065 3e506342c82d024a3d77801bf2e547ef 145 Gene3D G3DSA:3.10.50.40 3 70 1.7E-20 T 20-04-2016 AMC99_RS03065 3e506342c82d024a3d77801bf2e547ef 145 Gene3D G3DSA:3.10.50.40 124 143 1.7E-20 T 20-04-2016 AMC99_RS07450 92e88c1cdd0d097667f5a49b257fc9b7 385 Pfam PF01757 Acyltransferase family 42 365 4.1E-20 T 20-04-2016 IPR002656 Acyltransferase 3 GO:0016747 AMC99_RS07450 92e88c1cdd0d097667f5a49b257fc9b7 385 PANTHER PTHR23028 35 385 3.5E-20 T 20-04-2016 AMC99_RS02020 a15edaf6217ae8450d03bb24f61cb5ac 61 Pfam PF11450 Protein of unknwon function (DUF3008) 4 59 5.4E-30 T 20-04-2016 IPR021553 Protein of unknwon function DUF3008 AMC99_RS00380 eb86654eb93d7b59ec391f964f25383c 438 Pfam PF03743 Bacterial conjugation TrbI-like protein 227 431 1.1E-31 T 20-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AMC99_RS13675 eeca4015d5c37816b225444780ce1c2c 206 Pfam PF02517 CAAX protease self-immunity 96 198 6.7E-11 T 20-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 AMC99_RS03555 7ff49ac49983986c0eaf129fb772bf26 420 PIRSF PIRSF006060 1 417 1.9E-60 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS03555 7ff49ac49983986c0eaf129fb772bf26 420 Pfam PF13520 Amino acid permease 2 384 2.3E-38 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS03555 7ff49ac49983986c0eaf129fb772bf26 420 PANTHER PTHR11785 3 409 4.1E-60 T 20-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMC99_RS13305 26005cf4d14e8588b093bc1839f76d36 729 Pfam PF13550 Putative phage tail protein 278 389 1.0E-10 T 20-04-2016 IPR032876 Tip attachment protein J AMC99_RS00545 1103cd208a57bb8d9c7dbaf36bf0e8c8 329 Gene3D G3DSA:1.25.40.10 13 110 3.8E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMC99_RS06400 6610ea4c4cbdd041b6416244b773e637 254 Pfam PF03167 Uracil DNA glycosylase superfamily 107 202 1.6E-9 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like AMC99_RS06400 6610ea4c4cbdd041b6416244b773e637 254 Gene3D G3DSA:3.40.470.10 103 248 1.1E-13 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like AMC99_RS06400 6610ea4c4cbdd041b6416244b773e637 254 SUPERFAMILY SSF52141 103 248 3.6E-15 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like AMC99_RS11915 97e3fc22bd556bc0ee57650795644ef3 623 Pfam PF07940 Heparinase II/III-like protein 365 617 2.3E-54 T 20-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 AMC99_RS08810 e7f8d13389ce0c6054e357288e6d4fa8 87 Gene3D G3DSA:2.40.50.140 2 69 2.1E-7 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMC99_RS06715 053d6046bf012f590f5fffc492e367af 278 Gene3D G3DSA:3.40.50.1820 10 267 2.1E-47 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS06715 053d6046bf012f590f5fffc492e367af 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 5.2E-15 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS06715 053d6046bf012f590f5fffc492e367af 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 5.2E-15 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS06715 053d6046bf012f590f5fffc492e367af 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 5.2E-15 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS06715 053d6046bf012f590f5fffc492e367af 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 5.2E-15 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS06715 053d6046bf012f590f5fffc492e367af 278 Pfam PF12697 Alpha/beta hydrolase family 32 261 3.6E-17 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMC99_RS06715 053d6046bf012f590f5fffc492e367af 278 PANTHER PTHR10992 10 268 3.2E-32 T 20-04-2016 AMC99_RS06715 053d6046bf012f590f5fffc492e367af 278 SUPERFAMILY SSF53474 8 267 6.16E-51 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold AMC99_RS00825 3f5c4f11cf07a363b9b29ebc93ff3e38 73 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 4 69 4.5E-16 T 20-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 AMC99_RS11280 5179bf12d1eed3846ea5fcb3742e077e 193 Gene3D G3DSA:1.10.357.10 2 177 1.2E-12 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMC99_RS00450 b1d3627275a4eb6307f29bf017223398 248 Pfam PF03929 PepSY-associated TM region 17 242 8.6E-9 T 20-04-2016 IPR005625 PepSY-associated TM protein AMC99_RS01385 eeb4a34de3260eabf8d41da763e80497 388 Pfam PF05552 Conserved TM helix 187 234 8.0E-12 T 20-04-2016 IPR008910 Conserved TM helix AMC99_RS01385 eeb4a34de3260eabf8d41da763e80497 388 Pfam PF05552 Conserved TM helix 92 139 2.1E-11 T 20-04-2016 IPR008910 Conserved TM helix AMC99_RS11580 443344ec7340fd0aba7e26907b07d21e 457 Pfam PF04932 O-Antigen ligase 208 359 4.6E-10 T 20-04-2016 IPR007016 O-antigen ligase-related AMC99_RS08140 79032bdc8adafcf9a28ae629937087f4 496 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 71 224 8.1E-9 T 20-04-2016 AMC99_RS00345 3bea2e59aca29b3ac0f822ea64d57cfd 212 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 10 202 9.7E-63 T 20-04-2016 IPR014114 Type-F conjugative transfer system protein TraW AMC99_RS03675 9c20a66f132d84fa851d49d1a5200186 133 Pfam PF13471 Transglutaminase-like superfamily 27 125 4.8E-18 T 20-04-2016 IPR032708 Microcin J25-processing protein McjB, C-terminal AMC99_RS13440 5fcfe8b3cb373c4e59f3fe83b31cda21 76 Pfam PF04588 Hypoxia induced protein conserved region 14 69 5.2E-6 T 20-04-2016 IPR007667 Hypoxia induced protein, domain AMC99_RS01865 82caa9b24ad80491052e1c67885f046e 299 Pfam PF06629 MltA-interacting protein MipA 58 299 8.9E-36 T 20-04-2016 IPR010583 MltA-interacting MipA AMC99_RS01160 ee029b0c9ad5cb13c12a27ec706c8e23 134 Pfam PF06170 Protein of unknown function (DUF983) 33 117 1.9E-25 T 20-04-2016 IPR009325 Protein of unknown function DUF983 AMC99_RS08485 85d6b857b914a735111a00d00e0117af 149 Pfam PF14108 Domain of unknown function (DUF4281) 6 134 4.3E-27 T 20-04-2016 IPR025461 ABA DEFICIENT 4-like AMC99_RS11200 527d43b91a876b70a8e16c0cb0fb070b 167 Pfam PF14352 Domain of unknown function (DUF4402) 26 166 5.8E-23 T 20-04-2016 IPR025514 Protein of unknown function DUF4402 AMC99_RS09285 317fbb9846885d1c9dc2b417274ee27d 1396 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1051 1382 6.3E-51 T 20-04-2016 IPR007452 Translocation and assembly module TamB AMC99_RS07105 33cd14738d8030d6b17dd5aea30b0005 261 Pfam PF07277 SapC 19 238 1.9E-68 T 20-04-2016 IPR010836 SapC AMC99_RS11130 dfb707f549363480466db84f42fa91a8 203 SUPERFAMILY SSF50199 95 194 7.19E-14 T 20-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMC99_RS11130 dfb707f549363480466db84f42fa91a8 203 Gene3D G3DSA:2.40.50.90 94 190 1.2E-13 T 20-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMC99_RS13320 4e70037475deb0a71fb2cbd4c475df30 442 Pfam PF03237 Terminase-like family 56 427 4.4E-39 T 20-04-2016 IPR004921 Terminase, large subunit AMC99_RS04925 06342a087f6c2d0a6b9a4852c614e539 102 Pfam PF07238 PilZ domain 8 94 2.7E-5 T 20-04-2016 IPR009875 PilZ domain GO:0035438 AMC99_RS11155 6dca71d7ad325beb68fcef6f7a068eba 129 Pfam PF03929 PepSY-associated TM region 2 112 2.1E-12 T 20-04-2016 IPR005625 PepSY-associated TM protein AMC99_RS01935 26c7fc9b4c9cb7a5047af8ace20eb491 165 Pfam PF15655 NTF2 fold immunity protein 41 161 1.5E-5 T 20-04-2016 IPR028049 NTF2 fold immunity protein AMC99_RS10490 7f35541b645e01e71c23b7d03b4ae0c9 263 Pfam PF06577 Protein of unknown function (DUF1134) 105 263 5.0E-69 T 20-04-2016 IPR008325 Uncharacterised conserved protein UCP033924 AMC99_RS05095 573ce9ea00dca21cafdbe729ab271caa 263 Pfam PF05019 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 38 231 3.0E-7 T 20-04-2016 IPR007715 Ubiquinone biosynthesis protein Coq4 GO:0006744 UniPathway: UPA00232 AMC99_RS09015 632e6dc814f46ac70f155b08bb701eed 155 Pfam PF06073 Bacterial protein of unknown function (DUF934) 45 150 3.2E-37 T 20-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 AMC99_RS05845 dc3a410b073a4dec9bc2c93c7e63fff2 218 Pfam PF07947 YhhN-like protein 38 205 1.6E-19 T 20-04-2016 IPR012506 YhhN-like GO:0016021 AMC99_RS13055 b7ea016255d03accfd847f6c9b32d615 271 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 153 189 1.3E-5 T 20-04-2016 IPR018637 Domain of unknown function DUF2059 AMC99_RS07215 9a7a8b5306d74cc3215043088124df34 128 Pfam PF05433 Glycine zipper 2TM domain 81 120 1.3E-9 T 20-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 AMC99_RS13315 9919a448b968f1c50df28c42f5b567db 249 Pfam PF09356 Phage conserved hypothetical protein BR0599 164 240 6.7E-19 T 20-04-2016 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal AMC99_RS10400 cfc70d05fc83c720bb2a4caaebfbd991 171 Pfam PF03981 Ubiquinol-cytochrome C chaperone 37 168 2.0E-18 T 20-04-2016 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 AMC99_RS06685 950d3c6d288c8cad9dd243f2d5365e28 157 TIGRFAM TIGR02391 hypoth_ymh: TIGR02391 family protein 37 153 5.1E-20 T 20-04-2016 IPR012654 Conserved hypothetical protein CHP02391 AMC99_RS06685 950d3c6d288c8cad9dd243f2d5365e28 157 Pfam PF09509 Protein of unknown function (Hypoth_ymh) 35 152 2.9E-31 T 20-04-2016 IPR012654 Conserved hypothetical protein CHP02391 AMC99_RS06165 2ca39e2ffc6bc104d5be4bd98336f35d 156 Pfam PF06347 Bacterial SH3 domain 36 89 3.1E-16 T 20-04-2016 IPR010466 Protein of unknown function DUF1058 AMC99_RS06165 2ca39e2ffc6bc104d5be4bd98336f35d 156 Pfam PF06347 Bacterial SH3 domain 101 152 2.2E-13 T 20-04-2016 IPR010466 Protein of unknown function DUF1058 AMC99_RS10450 f694da9fce60b26344d216a6d168ca9d 184 Pfam PF14352 Domain of unknown function (DUF4402) 57 183 1.6E-7 T 20-04-2016 IPR025514 Protein of unknown function DUF4402 AMC99_RS04060 cca5f857441d2716a5c5c8e8186d127f 209 Pfam PF07811 TadE-like protein 17 59 1.0E-9 T 20-04-2016 IPR012495 TadE-like