locus-tag class description CJO11_RS00010 PF00691 OmpA family CJO11_RS00010 PF01389 OmpA-like transmembrane domain CJO11_RS00015 PF02321 Outer membrane efflux protein CJO11_RS00020 PF00664 ABC transporter transmembrane region CJO11_RS00020 PF03412 Peptidase C39 family CJO11_RS00020 PF00005 ABC transporter CJO11_RS00030 PF13533 Biotin-lipoyl like CJO11_RS00050 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO11_RS00050 PF01799 [2Fe-2S] binding domain CJO11_RS00050 PF10518 TAT (twin-arginine translocation) pathway signal sequence CJO11_RS00055 PF00941 FAD binding domain in molybdopterin dehydrogenase CJO11_RS00055 PF03450 CO dehydrogenase flavoprotein C-terminal domain CJO11_RS00060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJO11_RS00060 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJO11_RS00080 PF00239 Resolvase, N terminal domain CJO11_RS00080 PF02796 Helix-turn-helix domain of resolvase CJO11_RS00105 PF00206 Lyase CJO11_RS00105 PF10415 Fumarase C C-terminus CJO11_RS00120 PF00303 Thymidylate synthase CJO11_RS00125 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal CJO11_RS00125 PF00676 Dehydrogenase E1 component CJO11_RS00130 PF02779 Transketolase, pyrimidine binding domain CJO11_RS00130 PF02780 Transketolase, C-terminal domain CJO11_RS00135 PF00364 Biotin-requiring enzyme CJO11_RS00135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJO11_RS00135 PF02817 e3 binding domain CJO11_RS00150 PF01812 5-formyltetrahydrofolate cyclo-ligase family CJO11_RS00165 PF02779 Transketolase, pyrimidine binding domain CJO11_RS00165 PF02780 Transketolase, C-terminal domain CJO11_RS00165 PF00456 Transketolase, thiamine diphosphate binding domain CJO11_RS00170 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJO11_RS00170 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CJO11_RS00175 PF00162 Phosphoglycerate kinase CJO11_RS00185 PF00274 Fructose-bisphosphate aldolase class-I CJO11_RS00190 PF02581 Thiamine monophosphate synthase CJO11_RS00195 PF01725 Ham1 family CJO11_RS00200 PF03725 3' exoribonuclease family, domain 2 CJO11_RS00200 PF01138 3' exoribonuclease family, domain 1 CJO11_RS00205 PF01628 HrcA protein C terminal domain CJO11_RS00210 PF01025 GrpE CJO11_RS00225 PF04717 Type VI secretion system, phage-baseplate injector CJO11_RS00225 PF13296 Putative type VI secretion system Rhs element Vgr CJO11_RS00225 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CJO11_RS00235 PF00012 Hsp70 protein CJO11_RS00240 PF00684 DnaJ central domain CJO11_RS00240 PF00226 DnaJ domain CJO11_RS00240 PF01556 DnaJ C terminal domain CJO11_RS00245 PF01451 Low molecular weight phosphotyrosine protein phosphatase CJO11_RS00255 PF11856 Protein of unknown function (DUF3376) CJO11_RS00255 PF01734 Patatin-like phospholipase CJO11_RS00260 PF06745 KaiC CJO11_RS00260 PF18073 Rubredoxin metal binding domain CJO11_RS00275 PF00083 Sugar (and other) transporter CJO11_RS00275 PF08946 Osmosensory transporter coiled coil CJO11_RS00280 PF01168 Alanine racemase, N-terminal domain CJO11_RS00280 PF00842 Alanine racemase, C-terminal domain CJO11_RS00285 PF05233 PHB accumulation regulatory domain CJO11_RS00285 PF07879 PHB/PHA accumulation regulator DNA-binding domain CJO11_RS00290 PF03129 Anticodon binding domain CJO11_RS00290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJO11_RS00300 PF17876 Cold shock domain CJO11_RS00300 PF08461 Ribonuclease R winged-helix domain CJO11_RS00300 PF08206 Ribonuclease B OB domain CJO11_RS00300 PF00773 RNB domain CJO11_RS00300 PF00575 S1 RNA binding domain CJO11_RS00310 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJO11_RS00310 PF00364 Biotin-requiring enzyme CJO11_RS00310 PF02817 e3 binding domain CJO11_RS00325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJO11_RS00325 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO11_RS00335 PF01098 Cell cycle protein CJO11_RS00340 PF00905 Penicillin binding protein transpeptidase domain CJO11_RS00340 PF03717 Penicillin-binding Protein dimerisation domain CJO11_RS00360 PF08676 MutL C terminal dimerisation domain CJO11_RS00360 PF01119 DNA mismatch repair protein, C-terminal domain CJO11_RS00375 PF00291 Pyridoxal-phosphate dependent enzyme CJO11_RS00385 PF01575 MaoC like domain CJO11_RS00390 PF06071 Protein of unknown function (DUF933) CJO11_RS00390 PF01926 50S ribosome-binding GTPase CJO11_RS00400 PF01541 GIY-YIG catalytic domain CJO11_RS00405 PF01195 Peptidyl-tRNA hydrolase CJO11_RS00410 PF14693 Ribosomal protein TL5, C-terminal domain CJO11_RS00410 PF01386 Ribosomal L25p family CJO11_RS00420 PF00266 Aminotransferase class-V CJO11_RS00435 PF02091 Glycyl-tRNA synthetase alpha subunit CJO11_RS00440 PF02092 Glycyl-tRNA synthetase beta subunit CJO11_RS00440 PF05746 DALR anticodon binding domain CJO11_RS00445 PF00391 PEP-utilising enzyme, mobile domain CJO11_RS00445 PF02896 PEP-utilising enzyme, TIM barrel domain CJO11_RS00445 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CJO11_RS00460 PF01502 Phosphoribosyl-AMP cyclohydrolase CJO11_RS00465 PF13411 MerR HTH family regulatory protein CJO11_RS00470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS00470 PF12806 Acetyl-CoA dehydrogenase C-terminal like CJO11_RS00470 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS00470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS00480 PF00211 Adenylate and Guanylate cyclase catalytic domain CJO11_RS00495 PF00994 Probable molybdopterin binding domain CJO11_RS00520 PF08544 GHMP kinases C terminal CJO11_RS00530 PF00920 Dehydratase family CJO11_RS00540 PF03853 YjeF-related protein N-terminus CJO11_RS00540 PF01256 Carbohydrate kinase CJO11_RS00545 PF05958 tRNA (Uracil-5-)-methyltransferase CJO11_RS00570 PF13193 AMP-binding enzyme C-terminal domain CJO11_RS00570 PF00668 Condensation domain CJO11_RS00570 PF00550 Phosphopantetheine attachment site CJO11_RS00570 PF00501 AMP-binding enzyme CJO11_RS00575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJO11_RS00575 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJO11_RS00600 PF01471 Putative peptidoglycan binding domain CJO11_RS00600 PF13401 AAA domain CJO11_RS00605 PF01522 Polysaccharide deacetylase CJO11_RS00625 PF00733 Asparagine synthase CJO11_RS00625 PF13537 Glutamine amidotransferase domain CJO11_RS00630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJO11_RS00630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJO11_RS00630 PF00378 Enoyl-CoA hydratase/isomerase CJO11_RS00635 PF17954 Quercetinase C-terminal cupin domain CJO11_RS00635 PF02678 Pirin CJO11_RS00645 PF01906 Putative heavy-metal-binding CJO11_RS00650 PF03969 AFG1-like ATPase CJO11_RS00660 PF13085 2Fe-2S iron-sulfur cluster binding domain CJO11_RS00665 PF01209 ubiE/COQ5 methyltransferase family CJO11_RS00670 PF12111 Polyribonucleotide phosphorylase C terminal CJO11_RS00670 PF10150 Ribonuclease E/G family CJO11_RS00670 PF00575 S1 RNA binding domain CJO11_RS00680 PF11741 AMIN domain CJO11_RS00680 PF01520 N-acetylmuramoyl-L-alanine amidase CJO11_RS00685 PF00905 Penicillin binding protein transpeptidase domain CJO11_RS00685 PF00912 Transglycosylase CJO11_RS00685 PF17092 Penicillin-binding protein OB-like domain CJO11_RS00690 PF00578 AhpC/TSA family CJO11_RS00695 PF00472 RF-1 domain CJO11_RS00695 PF03462 PCRF domain CJO11_RS00710 PF08502 LeuA allosteric (dimerisation) domain CJO11_RS00710 PF00682 HMGL-like CJO11_RS00715 PF03275 UDP-galactopyranose mutase CJO11_RS00720 PF00535 Glycosyl transferase family 2 CJO11_RS00725 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CJO11_RS00725 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CJO11_RS00730 PF10369 Small subunit of acetolactate synthase CJO11_RS00740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJO11_RS00740 PF00205 Thiamine pyrophosphate enzyme, central domain CJO11_RS00740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJO11_RS00765 PF02769 AIR synthase related protein, C-terminal domain CJO11_RS00765 PF00586 AIR synthase related protein, N-terminal domain CJO11_RS00765 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CJO11_RS00780 PF02609 Exonuclease VII small subunit CJO11_RS00785 PF00348 Polyprenyl synthetase CJO11_RS00790 PF01467 Cytidylyltransferase-like CJO11_RS00795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJO11_RS00800 PF02547 Queuosine biosynthesis protein CJO11_RS00805 PF00005 ABC transporter CJO11_RS00810 PF01061 ABC-2 type transporter CJO11_RS00820 PF01702 Queuine tRNA-ribosyltransferase CJO11_RS00835 PF01479 S4 domain CJO11_RS00835 PF00163 Ribosomal protein S4/S9 N-terminal domain CJO11_RS00845 PF00588 SpoU rRNA Methylase family CJO11_RS00850 PF03477 ATP cone domain CJO11_RS00860 PF00464 Serine hydroxymethyltransferase CJO11_RS00865 PF02502 Ribose/Galactose Isomerase CJO11_RS00875 PF04545 Sigma-70, region 4 CJO11_RS00875 PF04539 Sigma-70 region 3 CJO11_RS00875 PF04542 Sigma-70 region 2 CJO11_RS00875 PF00140 Sigma-70 factor, region 1.2 CJO11_RS00875 PF03979 Sigma-70 factor, region 1.1 CJO11_RS00875 PF04546 Sigma-70, non-essential region CJO11_RS00880 PF01807 CHC2 zinc finger CJO11_RS00880 PF08278 DNA primase DnaG DnaB-binding CJO11_RS00880 PF10410 DnaB-helicase binding domain of primase CJO11_RS00880 PF08275 DNA primase catalytic core, N-terminal domain CJO11_RS00885 PF01541 GIY-YIG catalytic domain CJO11_RS00895 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CJO11_RS00895 PF00117 Glutamine amidotransferase class-I CJO11_RS00905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJO11_RS00905 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CJO11_RS00905 PF02142 MGS-like domain CJO11_RS00910 PF03449 Transcription elongation factor, N-terminal CJO11_RS00910 PF01272 Transcription elongation factor, GreA/GreB, C-term CJO11_RS00945 PF00113 Enolase, C-terminal TIM barrel domain CJO11_RS00945 PF03952 Enolase, N-terminal domain CJO11_RS00950 PF05649 Peptidase family M13 CJO11_RS00950 PF01431 Peptidase family M13 CJO11_RS00965 PF00248 Aldo/keto reductase family CJO11_RS00975 PF00885 6,7-dimethyl-8-ribityllumazine synthase CJO11_RS00985 PF13406 Transglycosylase SLT domain CJO11_RS00990 PF03330 Lytic transglycolase CJO11_RS00990 PF05036 Sporulation related domain CJO11_RS00995 PF07943 Penicillin-binding protein 5, C-terminal domain CJO11_RS00995 PF00768 D-alanyl-D-alanine carboxypeptidase CJO11_RS01000 PF02223 Thymidylate kinase CJO11_RS01005 PF09115 DNA polymerase III, delta subunit, C terminal CJO11_RS01010 PF09334 tRNA synthetases class I (M) CJO11_RS01015 PF01026 TatD related DNase CJO11_RS01020 PF03099 Biotin/lipoate A/B protein ligase family CJO11_RS01020 PF12706 Beta-lactamase superfamily domain CJO11_RS01025 PF03819 MazG nucleotide pyrophosphohydrolase domain CJO11_RS01030 PF16360 GTP-binding GTPase Middle Region CJO11_RS01030 PF13167 GTP-binding GTPase N-terminal CJO11_RS01030 PF01926 50S ribosome-binding GTPase CJO11_RS01035 PF17209 Hfq protein CJO11_RS01040 PF02954 Bacterial regulatory protein, Fis family CJO11_RS01040 PF00072 Response regulator receiver domain CJO11_RS01040 PF00158 Sigma-54 interaction domain CJO11_RS01045 PF00672 HAMP domain CJO11_RS01045 PF00989 PAS fold CJO11_RS01045 PF00512 His Kinase A (phospho-acceptor) domain CJO11_RS01045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS01050 PF00158 Sigma-54 interaction domain CJO11_RS01050 PF00072 Response regulator receiver domain CJO11_RS01050 PF02954 Bacterial regulatory protein, Fis family CJO11_RS01055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS01055 PF00512 His Kinase A (phospho-acceptor) domain CJO11_RS01055 PF00989 PAS fold CJO11_RS01060 PF01207 Dihydrouridine synthase (Dus) CJO11_RS01065 PF02542 YgbB family CJO11_RS01065 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CJO11_RS01070 PF02464 Competence-damaged protein CJO11_RS01075 PF03364 Polyketide cyclase / dehydrase and lipid transport CJO11_RS01080 PF04055 Radical SAM superfamily CJO11_RS01080 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CJO11_RS01085 PF00484 Carbonic anhydrase CJO11_RS01100 PF03989 DNA gyrase C-terminal domain, beta-propeller CJO11_RS01100 PF00521 DNA gyrase/topoisomerase IV, subunit A CJO11_RS01105 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CJO11_RS01115 PF01134 Glucose inhibited division protein A CJO11_RS01160 PF00364 Biotin-requiring enzyme CJO11_RS01160 PF02779 Transketolase, pyrimidine binding domain CJO11_RS01160 PF02780 Transketolase, C-terminal domain CJO11_RS01165 PF00676 Dehydrogenase E1 component CJO11_RS01190 PF00795 Carbon-nitrogen hydrolase CJO11_RS01195 PF00462 Glutaredoxin CJO11_RS01200 PF00011 Hsp20/alpha crystallin family CJO11_RS01205 PF06418 CTP synthase N-terminus CJO11_RS01205 PF00117 Glutamine amidotransferase class-I CJO11_RS01215 PF00121 Triosephosphate isomerase CJO11_RS01225 PF00425 chorismate binding enzyme CJO11_RS01225 PF04715 Anthranilate synthase component I, N terminal region CJO11_RS01235 PF01494 FAD binding domain CJO11_RS01240 PF00561 alpha/beta hydrolase fold CJO11_RS01245 PF00117 Glutamine amidotransferase class-I CJO11_RS01250 PF02885 Glycosyl transferase family, helical bundle domain CJO11_RS01250 PF00591 Glycosyl transferase family, a/b domain CJO11_RS01255 PF00218 Indole-3-glycerol phosphate synthase CJO11_RS01260 PF01967 MoaC family CJO11_RS01265 PF00994 Probable molybdopterin binding domain CJO11_RS01265 PF03453 MoeA N-terminal region (domain I and II) CJO11_RS01265 PF03454 MoeA C-terminal region (domain IV) CJO11_RS01270 PF01726 LexA DNA binding domain CJO11_RS01270 PF00717 Peptidase S24-like CJO11_RS01275 PF00753 Metallo-beta-lactamase superfamily CJO11_RS01275 PF03772 Competence protein CJO11_RS01280 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJO11_RS01285 PF00285 Citrate synthase, C-terminal domain CJO11_RS01295 PF00512 His Kinase A (phospho-acceptor) domain CJO11_RS01295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS01325 PF17770 Ribonuclease J C-terminal domain CJO11_RS01325 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CJO11_RS01325 PF12706 Beta-lactamase superfamily domain CJO11_RS01330 PF03309 Type III pantothenate kinase CJO11_RS01335 PF03099 Biotin/lipoate A/B protein ligase family CJO11_RS01335 PF02237 Biotin protein ligase C terminal domain CJO11_RS01340 PF00361 Proton-conducting membrane transporter CJO11_RS01345 PF00361 Proton-conducting membrane transporter CJO11_RS01345 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CJO11_RS01350 PF00361 Proton-conducting membrane transporter CJO11_RS01350 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CJO11_RS01355 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CJO11_RS01360 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CJO11_RS01365 PF12838 4Fe-4S dicluster domain CJO11_RS01370 PF00146 NADH dehydrogenase CJO11_RS01380 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CJO11_RS01380 PF00384 Molybdopterin oxidoreductase CJO11_RS01380 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJO11_RS01385 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CJO11_RS01385 PF10531 SLBB domain CJO11_RS01385 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CJO11_RS01400 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CJO11_RS01405 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CJO11_RS01410 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJO11_RS01415 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CJO11_RS01420 PF00171 Aldehyde dehydrogenase family CJO11_RS01425 PF02803 Thiolase, C-terminal domain CJO11_RS01425 PF00108 Thiolase, N-terminal domain CJO11_RS01435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJO11_RS01435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO11_RS01445 PF04909 Amidohydrolase CJO11_RS01470 PF01368 DHH family CJO11_RS01470 PF02272 DHHA1 domain CJO11_RS01470 PF17768 RecJ OB domain CJO11_RS01490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS01490 PF00989 PAS fold CJO11_RS01490 PF00512 His Kinase A (phospho-acceptor) domain CJO11_RS01490 PF16736 Single Cache-like CJO11_RS01495 PF01895 PhoU domain CJO11_RS01500 PF00486 Transcriptional regulatory protein, C terminal CJO11_RS01500 PF00072 Response regulator receiver domain CJO11_RS01510 PF01810 LysE type translocator CJO11_RS01515 PF02811 PHP domain CJO11_RS01515 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJO11_RS01515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJO11_RS01515 PF01336 OB-fold nucleic acid binding domain CJO11_RS01515 PF14579 Helix-hairpin-helix motif CJO11_RS01535 PF13520 Amino acid permease CJO11_RS01540 PF02548 Ketopantoate hydroxymethyltransferase CJO11_RS01550 PF13593 SBF-like CPA transporter family (DUF4137) CJO11_RS01560 PF00072 Response regulator receiver domain CJO11_RS01560 PF00158 Sigma-54 interaction domain CJO11_RS01560 PF02954 Bacterial regulatory protein, Fis family CJO11_RS01565 PF00989 PAS fold CJO11_RS01565 PF00512 His Kinase A (phospho-acceptor) domain CJO11_RS01565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS01570 PF02397 Bacterial sugar transferase CJO11_RS01575 PF01381 Helix-turn-helix CJO11_RS01575 PF06114 IrrE N-terminal-like domain CJO11_RS01575 PF09856 Predicted transcriptional regulator (DUF2083) CJO11_RS01580 PF00463 Isocitrate lyase family CJO11_RS01600 PF00459 Inositol monophosphatase family CJO11_RS01605 PF09285 Elongation factor P, C-terminal CJO11_RS01605 PF08207 Elongation factor P (EF-P) KOW-like domain CJO11_RS01605 PF01132 Elongation factor P (EF-P) OB domain CJO11_RS01615 PF04055 Radical SAM superfamily CJO11_RS01615 PF06969 HemN C-terminal domain CJO11_RS01620 PF02899 Phage integrase, N-terminal SAM-like domain CJO11_RS01620 PF00589 Phage integrase family CJO11_RS01625 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CJO11_RS01625 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CJO11_RS01630 PF02021 Uncharacterised protein family UPF0102 CJO11_RS01635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJO11_RS01645 PF01751 Toprim domain CJO11_RS01645 PF00204 DNA gyrase B CJO11_RS01645 PF00986 DNA gyrase B subunit, carboxyl terminus CJO11_RS01645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS01660 PF00004 ATPase family associated with various cellular activities (AAA) CJO11_RS01660 PF01434 Peptidase family M41 CJO11_RS01660 PF17862 AAA+ lid domain CJO11_RS01670 PF12729 Four helix bundle sensory module for signal transduction CJO11_RS01670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO11_RS01670 PF00672 HAMP domain CJO11_RS01675 PF05675 Protein of unknown function (DUF817) CJO11_RS01685 PF07690 Major Facilitator Superfamily CJO11_RS01690 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CJO11_RS01695 PF07075 Protein of unknown function (DUF1343) CJO11_RS01705 PF00579 tRNA synthetases class I (W and Y) CJO11_RS01705 PF01479 S4 domain CJO11_RS01720 PF00291 Pyridoxal-phosphate dependent enzyme CJO11_RS01735 PF00501 AMP-binding enzyme CJO11_RS01735 PF13193 AMP-binding enzyme C-terminal domain CJO11_RS01740 PF02811 PHP domain CJO11_RS01740 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJO11_RS01740 PF14579 Helix-hairpin-helix motif CJO11_RS01740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJO11_RS01745 PF00255 Glutathione peroxidase CJO11_RS01755 PF00005 ABC transporter CJO11_RS01760 PF02687 FtsX-like permease family CJO11_RS01760 PF12704 MacB-like periplasmic core domain CJO11_RS01765 PF00156 Phosphoribosyl transferase domain CJO11_RS01765 PF13537 Glutamine amidotransferase domain CJO11_RS01770 PF00106 short chain dehydrogenase CJO11_RS01790 PF00875 DNA photolyase CJO11_RS01790 PF03441 FAD binding domain of DNA photolyase CJO11_RS01795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJO11_RS01800 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CJO11_RS01800 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CJO11_RS01800 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CJO11_RS01805 PF07859 alpha/beta hydrolase fold CJO11_RS01810 PF00293 NUDIX domain CJO11_RS01820 PF01189 16S rRNA methyltransferase RsmB/F CJO11_RS01820 PF01029 NusB family CJO11_RS01825 PF00478 IMP dehydrogenase / GMP reductase domain CJO11_RS01825 PF00571 CBS domain CJO11_RS01840 PF04228 Putative neutral zinc metallopeptidase CJO11_RS01850 PF03965 Penicillinase repressor CJO11_RS01855 PF01070 FMN-dependent dehydrogenase CJO11_RS01860 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJO11_RS01865 PF00890 FAD binding domain CJO11_RS01865 PF02910 Fumarate reductase flavoprotein C-term CJO11_RS01870 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CJO11_RS01875 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CJO11_RS01890 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CJO11_RS01890 PF03120 NAD-dependent DNA ligase OB-fold domain CJO11_RS01890 PF12826 Helix-hairpin-helix motif CJO11_RS01890 PF01653 NAD-dependent DNA ligase adenylation domain CJO11_RS01890 PF00533 BRCA1 C Terminus (BRCT) domain CJO11_RS01905 PF13476 AAA domain CJO11_RS01905 PF02463 RecF/RecN/SMC N terminal domain CJO11_RS01910 PF00990 Diguanylate cyclase, GGDEF domain CJO11_RS01910 PF03707 Bacterial signalling protein N terminal repeat CJO11_RS01910 PF00563 EAL domain CJO11_RS01915 PF01513 ATP-NAD kinase CJO11_RS01925 PF01925 Sulfite exporter TauE/SafE CJO11_RS01930 PF00583 Acetyltransferase (GNAT) family CJO11_RS01935 PF01043 SecA preprotein cross-linking domain CJO11_RS01935 PF07517 SecA DEAD-like domain CJO11_RS01935 PF07516 SecA Wing and Scaffold domain CJO11_RS01935 PF02810 SEC-C motif CJO11_RS01945 PF01960 ArgJ family CJO11_RS01950 PF00459 Inositol monophosphatase family CJO11_RS01955 PF00085 Thioredoxin CJO11_RS01960 PF12705 PD-(D/E)XK nuclease superfamily CJO11_RS01960 PF00580 UvrD/REP helicase N-terminal domain CJO11_RS01960 PF13361 UvrD-like helicase C-terminal domain CJO11_RS01965 PF12705 PD-(D/E)XK nuclease superfamily CJO11_RS01970 PF12804 MobA-like NTP transferase domain CJO11_RS01975 PF01636 Phosphotransferase enzyme family CJO11_RS01980 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CJO11_RS01985 PF00512 His Kinase A (phospho-acceptor) domain CJO11_RS01985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS01990 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CJO11_RS01990 PF05221 S-adenosyl-L-homocysteine hydrolase CJO11_RS02000 PF08534 Redoxin CJO11_RS02000 PF00462 Glutaredoxin CJO11_RS02010 PF01227 GTP cyclohydrolase I CJO11_RS02020 PF00293 NUDIX domain CJO11_RS02040 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CJO11_RS02045 PF00589 Phage integrase family CJO11_RS02045 PF02899 Phage integrase, N-terminal SAM-like domain CJO11_RS02055 PF01202 Shikimate kinase CJO11_RS02060 PF01761 3-dehydroquinate synthase CJO11_RS02070 PF01588 Putative tRNA binding domain CJO11_RS02075 PF18140 Propionyl-coenzyme A carboxylase BT domain CJO11_RS02075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJO11_RS02075 PF00364 Biotin-requiring enzyme CJO11_RS02075 PF00289 Biotin carboxylase, N-terminal domain CJO11_RS02075 PF02785 Biotin carboxylase C-terminal domain CJO11_RS02085 PF04055 Radical SAM superfamily CJO11_RS02085 PF06968 Biotin and Thiamin Synthesis associated domain CJO11_RS02095 PF02310 B12 binding domain CJO11_RS02095 PF01642 Methylmalonyl-CoA mutase CJO11_RS02110 PF01039 Carboxyl transferase domain CJO11_RS02115 PF01381 Helix-turn-helix CJO11_RS02115 PF06114 IrrE N-terminal-like domain CJO11_RS02115 PF09856 Predicted transcriptional regulator (DUF2083) CJO11_RS02125 PF01370 NAD dependent epimerase/dehydratase family CJO11_RS02130 PF01266 FAD dependent oxidoreductase CJO11_RS02135 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO11_RS02135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJO11_RS02140 PF00271 Helicase conserved C-terminal domain CJO11_RS02140 PF00270 DEAD/DEAH box helicase CJO11_RS02145 PF00342 Phosphoglucose isomerase CJO11_RS02150 PF14622 Ribonuclease-III-like CJO11_RS02150 PF00035 Double-stranded RNA binding motif CJO11_RS02155 PF01926 50S ribosome-binding GTPase CJO11_RS02155 PF07650 KH domain CJO11_RS02165 PF01396 Topoisomerase DNA binding C4 zinc finger CJO11_RS02165 PF01131 DNA topoisomerase CJO11_RS02165 PF01751 Toprim domain CJO11_RS02165 PF13368 Topoisomerase C-terminal repeat CJO11_RS02175 PF17782 DprA winged helix domain CJO11_RS02175 PF02481 DNA recombination-mediator protein A CJO11_RS02180 PF02660 Glycerol-3-phosphate acyltransferase CJO11_RS02185 PF01177 Asp/Glu/Hydantoin racemase CJO11_RS02195 PF00155 Aminotransferase class I and II CJO11_RS02200 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CJO11_RS02205 PF08448 PAS fold CJO11_RS02205 PF00990 Diguanylate cyclase, GGDEF domain CJO11_RS02205 PF00563 EAL domain CJO11_RS02205 PF08447 PAS fold CJO11_RS02210 PF00881 Nitroreductase family CJO11_RS02230 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJO11_RS02230 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJO11_RS02235 PF00990 Diguanylate cyclase, GGDEF domain CJO11_RS02235 PF05230 MASE2 domain CJO11_RS02245 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJO11_RS02255 PF03435 Saccharopine dehydrogenase NADP binding domain CJO11_RS02255 PF16653 Saccharopine dehydrogenase C-terminal domain CJO11_RS02260 PF00291 Pyridoxal-phosphate dependent enzyme CJO11_RS02275 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO11_RS02295 PF10017 Histidine-specific methyltransferase, SAM-dependent CJO11_RS02305 PF01474 Class-II DAHP synthetase family CJO11_RS02315 PF01106 NifU-like domain CJO11_RS02320 PF00814 Glycoprotease family CJO11_RS02325 PF00583 Acetyltransferase (GNAT) family CJO11_RS02325 PF00814 Glycoprotease family CJO11_RS02330 PF05443 ROS/MUCR transcriptional regulator protein CJO11_RS02335 PF01475 Ferric uptake regulator family CJO11_RS02345 PF00919 Uncharacterized protein family UPF0004 CJO11_RS02345 PF01938 TRAM domain CJO11_RS02345 PF04055 Radical SAM superfamily CJO11_RS02355 PF00892 EamA-like transporter family CJO11_RS02360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJO11_RS02360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJO11_RS02365 PF00378 Enoyl-CoA hydratase/isomerase CJO11_RS02370 PF00378 Enoyl-CoA hydratase/isomerase CJO11_RS02375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS02375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS02375 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS02380 PF00171 Aldehyde dehydrogenase family CJO11_RS02385 PF03922 OmpW family CJO11_RS02390 PF00271 Helicase conserved C-terminal domain CJO11_RS02390 PF00270 DEAD/DEAH box helicase CJO11_RS02390 PF17191 RecG wedge domain CJO11_RS02405 PF00271 Helicase conserved C-terminal domain CJO11_RS02405 PF00270 DEAD/DEAH box helicase CJO11_RS02405 PF02559 CarD-like/TRCF domain CJO11_RS02405 PF03461 TRCF domain CJO11_RS02405 PF17757 UvrB interaction domain CJO11_RS02410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS02410 PF00512 His Kinase A (phospho-acceptor) domain CJO11_RS02410 PF00072 Response regulator receiver domain CJO11_RS02410 PF00989 PAS fold CJO11_RS02410 PF01627 Hpt domain CJO11_RS02410 PF18415 Histidine kinase receptor ArcB trans-membrane domain CJO11_RS02415 PF13525 Outer membrane lipoprotein CJO11_RS02425 PF18284 DNA methylase N-terminal domain CJO11_RS02425 PF00145 C-5 cytosine-specific DNA methylase CJO11_RS02440 PF00009 Elongation factor Tu GTP binding domain CJO11_RS02440 PF00679 Elongation factor G C-terminus CJO11_RS02440 PF06421 GTP-binding protein LepA C-terminus CJO11_RS02445 PF00563 EAL domain CJO11_RS02445 PF03707 Bacterial signalling protein N terminal repeat CJO11_RS02445 PF00990 Diguanylate cyclase, GGDEF domain CJO11_RS02445 PF13188 PAS domain CJO11_RS02450 PF00563 EAL domain CJO11_RS02450 PF13188 PAS domain CJO11_RS02450 PF00990 Diguanylate cyclase, GGDEF domain CJO11_RS02450 PF03707 Bacterial signalling protein N terminal repeat CJO11_RS02455 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CJO11_RS02460 PF00561 alpha/beta hydrolase fold CJO11_RS02465 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO11_RS02470 PF07969 Amidohydrolase family CJO11_RS02475 PF08659 KR domain CJO11_RS02475 PF00550 Phosphopantetheine attachment site CJO11_RS02475 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO11_RS02475 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO11_RS02475 PF14765 Polyketide synthase dehydratase CJO11_RS02475 PF00107 Zinc-binding dehydrogenase CJO11_RS02475 PF16197 Ketoacyl-synthetase C-terminal extension CJO11_RS02475 PF00698 Acyl transferase domain CJO11_RS02475 PF08240 Alcohol dehydrogenase GroES-like domain CJO11_RS02485 PF02768 DNA polymerase III beta subunit, C-terminal domain CJO11_RS02485 PF02767 DNA polymerase III beta subunit, central domain CJO11_RS02485 PF00712 DNA polymerase III beta subunit, N-terminal domain CJO11_RS02500 PF00698 Acyl transferase domain CJO11_RS02510 PF01225 Mur ligase family, catalytic domain CJO11_RS02510 PF02875 Mur ligase family, glutamate ligase domain CJO11_RS02510 PF08245 Mur ligase middle domain CJO11_RS02515 PF00043 Glutathione S-transferase, C-terminal domain CJO11_RS02515 PF02798 Glutathione S-transferase, N-terminal domain CJO11_RS02520 PF01250 Ribosomal protein S6 CJO11_RS02525 PF01084 Ribosomal protein S18 CJO11_RS02530 PF03948 Ribosomal protein L9, C-terminal domain CJO11_RS02530 PF01281 Ribosomal protein L9, N-terminal domain CJO11_RS02535 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CJO11_RS02535 PF01048 Phosphorylase superfamily CJO11_RS02545 PF08443 RimK-like ATP-grasp domain CJO11_RS02545 PF18030 RimK PreATP-grasp domain CJO11_RS02550 PF08443 RimK-like ATP-grasp domain CJO11_RS02550 PF18030 RimK PreATP-grasp domain CJO11_RS02565 PF12802 MarR family CJO11_RS02570 PF00529 HlyD membrane-fusion protein of T1SS CJO11_RS02570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO11_RS02575 PF07690 Major Facilitator Superfamily CJO11_RS02585 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJO11_RS02585 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJO11_RS02590 PF12697 Alpha/beta hydrolase family CJO11_RS02595 PF13520 Amino acid permease CJO11_RS02600 PF00326 Prolyl oligopeptidase family CJO11_RS02600 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CJO11_RS02605 PF01245 Ribosomal protein L19 CJO11_RS02610 PF01746 tRNA (Guanine-1)-methyltransferase CJO11_RS02615 PF05239 PRC-barrel domain CJO11_RS02615 PF01782 RimM N-terminal domain CJO11_RS02620 PF00886 Ribosomal protein S16 CJO11_RS02625 PF02881 SRP54-type protein, helical bundle domain CJO11_RS02625 PF00448 SRP54-type protein, GTPase domain CJO11_RS02625 PF02978 Signal peptide binding domain CJO11_RS02640 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJO11_RS02650 PF02224 Cytidylate kinase CJO11_RS02660 PF00575 S1 RNA binding domain CJO11_RS02665 PF16123 Hydroxyacylglutathione hydrolase C-terminus CJO11_RS02665 PF00753 Metallo-beta-lactamase superfamily CJO11_RS02670 PF00107 Zinc-binding dehydrogenase CJO11_RS02670 PF08240 Alcohol dehydrogenase GroES-like domain CJO11_RS02675 PF00430 ATP synthase B/B' CF(0) CJO11_RS02680 PF00430 ATP synthase B/B' CF(0) CJO11_RS02685 PF00137 ATP synthase subunit C CJO11_RS02690 PF00119 ATP synthase A chain CJO11_RS02715 PF04002 RadC-like JAB domain CJO11_RS02730 PF00206 Lyase CJO11_RS02730 PF10397 Adenylosuccinate lyase C-terminus CJO11_RS02740 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CJO11_RS02750 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CJO11_RS02755 PF00291 Pyridoxal-phosphate dependent enzyme CJO11_RS02765 PF00290 Tryptophan synthase alpha chain CJO11_RS02770 PF17848 Acetyl-coA carboxylase zinc finger domain CJO11_RS02770 PF01039 Carboxyl transferase domain CJO11_RS02775 PF02875 Mur ligase family, glutamate ligase domain CJO11_RS02775 PF08245 Mur ligase middle domain CJO11_RS02780 PF07690 Major Facilitator Superfamily CJO11_RS02785 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJO11_RS02785 PF00355 Rieske [2Fe-2S] domain CJO11_RS02790 PF00849 RNA pseudouridylate synthase CJO11_RS02790 PF01479 S4 domain CJO11_RS02805 PF00580 UvrD/REP helicase N-terminal domain CJO11_RS02805 PF13361 UvrD-like helicase C-terminal domain CJO11_RS02810 PF13488 Glycine zipper CJO11_RS02810 PF00691 OmpA family CJO11_RS02825 PF02541 Ppx/GppA phosphatase family CJO11_RS02830 PF01728 FtsJ-like methyltransferase CJO11_RS02835 PF00034 Cytochrome c CJO11_RS02840 PF01817 Chorismate mutase type II CJO11_RS02840 PF01842 ACT domain CJO11_RS02840 PF00800 Prephenate dehydratase CJO11_RS02855 PF07726 ATPase family associated with various cellular activities (AAA) CJO11_RS02855 PF17863 AAA lid domain CJO11_RS02880 PF00583 Acetyltransferase (GNAT) family CJO11_RS02890 PF01112 Asparaginase CJO11_RS02900 PF00106 short chain dehydrogenase CJO11_RS02905 PF01544 CorA-like Mg2+ transporter protein CJO11_RS02910 PF04551 GcpE protein CJO11_RS02925 PF03734 L,D-transpeptidase catalytic domain CJO11_RS02925 PF01471 Putative peptidoglycan binding domain CJO11_RS02935 PF00330 Aconitase family (aconitate hydratase) CJO11_RS02935 PF00694 Aconitase C-terminal domain CJO11_RS02940 PF00581 Rhodanese-like domain CJO11_RS02955 PF05496 Holliday junction DNA helicase RuvB P-loop domain CJO11_RS02955 PF05491 RuvB C-terminal winged helix domain CJO11_RS02955 PF17864 RuvB AAA lid domain CJO11_RS02965 PF01330 RuvA N terminal domain CJO11_RS02965 PF07499 RuvA, C-terminal domain CJO11_RS02970 PF01264 Chorismate synthase CJO11_RS02975 PF00141 Peroxidase CJO11_RS02980 PF00581 Rhodanese-like domain CJO11_RS02980 PF17773 UPF0176 acylphosphatase like domain CJO11_RS03000 PF04280 Tim44-like domain CJO11_RS03005 PF02556 Preprotein translocase subunit SecB CJO11_RS03010 PF03023 Lipid II flippase MurJ CJO11_RS03015 PF00579 tRNA synthetases class I (W and Y) CJO11_RS03030 PF00692 dUTPase CJO11_RS03035 PF02441 Flavoprotein CJO11_RS03035 PF04127 DNA / pantothenate metabolism flavoprotein CJO11_RS03045 PF03109 ABC1 family CJO11_RS03050 PF01209 ubiE/COQ5 methyltransferase family CJO11_RS03055 PF06827 Zinc finger found in FPG and IleRS CJO11_RS03055 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CJO11_RS03055 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CJO11_RS03060 PF01649 Ribosomal protein S20 CJO11_RS03065 PF00308 Bacterial dnaA protein CJO11_RS03065 PF08299 Bacterial dnaA protein helix-turn-helix CJO11_RS03065 PF11638 DnaA N-terminal domain CJO11_RS03075 PF00581 Rhodanese-like domain CJO11_RS03075 PF00899 ThiF family CJO11_RS03080 PF13520 Amino acid permease CJO11_RS03085 PF02146 Sir2 family CJO11_RS03090 PF00561 alpha/beta hydrolase fold CJO11_RS03095 PF01113 Dihydrodipicolinate reductase, N-terminus CJO11_RS03095 PF05173 Dihydrodipicolinate reductase, C-terminus CJO11_RS03105 PF00633 Helix-hairpin-helix motif CJO11_RS03105 PF10576 Iron-sulfur binding domain of endonuclease III CJO11_RS03105 PF00730 HhH-GPD superfamily base excision DNA repair protein CJO11_RS03110 PF03009 Glycerophosphoryl diester phosphodiesterase family CJO11_RS03120 PF04973 Nicotinamide mononucleotide transporter CJO11_RS03125 PF03960 ArsC family CJO11_RS03135 PF02075 Crossover junction endodeoxyribonuclease RuvC CJO11_RS03145 PF01709 Transcriptional regulator CJO11_RS03160 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) CJO11_RS03170 PF02887 Pyruvate kinase, alpha/beta domain CJO11_RS03170 PF00224 Pyruvate kinase, barrel domain CJO11_RS03175 PF00171 Aldehyde dehydrogenase family CJO11_RS03180 PF13360 PQQ-like domain CJO11_RS03180 PF01011 PQQ enzyme repeat CJO11_RS03180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJO11_RS03190 PF01145 SPFH domain / Band 7 family CJO11_RS03190 PF16200 C-terminal region of band_7 CJO11_RS03210 PF00211 Adenylate and Guanylate cyclase catalytic domain CJO11_RS03230 PF00348 Polyprenyl synthetase CJO11_RS03245 PF00873 AcrB/AcrD/AcrF family CJO11_RS03260 PF00512 His Kinase A (phospho-acceptor) domain CJO11_RS03260 PF00672 HAMP domain CJO11_RS03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS03265 PF00486 Transcriptional regulatory protein, C terminal CJO11_RS03265 PF00072 Response regulator receiver domain CJO11_RS03295 PF02824 TGS domain CJO11_RS03295 PF04607 Region found in RelA / SpoT proteins CJO11_RS03295 PF13291 ACT domain CJO11_RS03300 PF01654 Cytochrome bd terminal oxidase subunit I CJO11_RS03305 PF02322 Cytochrome bd terminal oxidase subunit II CJO11_RS03315 PF01433 Peptidase family M1 domain CJO11_RS03320 PF00722 Glycosyl hydrolases family 16 CJO11_RS03325 PF01218 Coproporphyrinogen III oxidase CJO11_RS03335 PF00707 Translation initiation factor IF-3, C-terminal domain CJO11_RS03335 PF05198 Translation initiation factor IF-3, N-terminal domain CJO11_RS03340 PF00939 Sodium:sulfate symporter transmembrane region CJO11_RS03345 PF01053 Cys/Met metabolism PLP-dependent enzyme CJO11_RS03350 PF02225 PA domain CJO11_RS03350 PF04389 Peptidase family M28 CJO11_RS03355 PF00684 DnaJ central domain CJO11_RS03355 PF01556 DnaJ C terminal domain CJO11_RS03355 PF00226 DnaJ domain CJO11_RS03365 PF00691 OmpA family CJO11_RS03370 PF04052 TolB amino-terminal domain CJO11_RS03370 PF07676 WD40-like Beta Propeller Repeat CJO11_RS03380 PF02472 Biopolymer transport protein ExbD/TolR CJO11_RS03385 PF01618 MotA/TolQ/ExbB proton channel family CJO11_RS03390 PF03061 Thioesterase superfamily CJO11_RS03395 PF01230 HIT domain CJO11_RS03400 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CJO11_RS03410 PF00977 Histidine biosynthesis protein CJO11_RS03415 PF00977 Histidine biosynthesis protein CJO11_RS03420 PF00117 Glutamine amidotransferase class-I CJO11_RS03425 PF00475 Imidazoleglycerol-phosphate dehydratase CJO11_RS03440 PF00625 Guanylate kinase CJO11_RS03475 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS03475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS03475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS03480 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS03480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS03480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS03490 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS03490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS03490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS03495 PF08240 Alcohol dehydrogenase GroES-like domain CJO11_RS03495 PF00107 Zinc-binding dehydrogenase CJO11_RS03505 PF00082 Subtilase family CJO11_RS03510 PF14602 Hexapeptide repeat of succinyl-transferase CJO11_RS03510 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CJO11_RS03510 PF00132 Bacterial transferase hexapeptide (six repeats) CJO11_RS03540 PF01161 Phosphatidylethanolamine-binding protein CJO11_RS03565 PF01016 Ribosomal L27 protein CJO11_RS03570 PF00829 Ribosomal prokaryotic L21 protein CJO11_RS03590 PF04055 Radical SAM superfamily CJO11_RS03590 PF06463 Molybdenum Cofactor Synthesis C CJO11_RS03610 PF14821 Threonine synthase N terminus CJO11_RS03610 PF00291 Pyridoxal-phosphate dependent enzyme CJO11_RS03625 PF00510 Cytochrome c oxidase subunit III CJO11_RS03630 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CJO11_RS03635 PF01040 UbiA prenyltransferase family CJO11_RS03640 PF00561 alpha/beta hydrolase fold CJO11_RS03645 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJO11_RS03650 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CJO11_RS03650 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CJO11_RS03655 PF00156 Phosphoribosyl transferase domain CJO11_RS03660 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CJO11_RS03665 PF01648 4'-phosphopantetheinyl transferase superfamily CJO11_RS03670 PF10502 Signal peptidase, peptidase S26 CJO11_RS03675 PF01594 AI-2E family transporter CJO11_RS03685 PF03652 Holliday junction resolvase CJO11_RS03690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CJO11_RS03690 PF00925 GTP cyclohydrolase II CJO11_RS03705 PF01966 HD domain CJO11_RS03705 PF13286 Phosphohydrolase-associated domain CJO11_RS03725 PF02233 NAD(P) transhydrogenase beta subunit CJO11_RS03730 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CJO11_RS03735 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CJO11_RS03735 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJO11_RS03745 PF02954 Bacterial regulatory protein, Fis family CJO11_RS03745 PF00158 Sigma-54 interaction domain CJO11_RS03745 PF00072 Response regulator receiver domain CJO11_RS03755 PF00809 Pterin binding enzyme CJO11_RS03770 PF18755 Restriction Enzyme Adenine Methylase Associated CJO11_RS03770 PF01555 DNA methylase CJO11_RS03775 PF00135 Carboxylesterase family CJO11_RS03785 PF01351 Ribonuclease HII CJO11_RS03790 PF07995 Glucose / Sorbosone dehydrogenase CJO11_RS03795 PF00854 POT family CJO11_RS03800 PF00248 Aldo/keto reductase family CJO11_RS03815 PF00293 NUDIX domain CJO11_RS03820 PF12627 Probable RNA and SrmB- binding site of polymerase A CJO11_RS03820 PF13735 tRNA nucleotidyltransferase domain 2 putative CJO11_RS03820 PF01743 Poly A polymerase head domain CJO11_RS03830 PF00710 Asparaginase, N-terminal CJO11_RS03830 PF17763 Glutaminase/Asparaginase C-terminal domain CJO11_RS03840 PF08534 Redoxin CJO11_RS03845 PF00206 Lyase CJO11_RS03845 PF14698 Argininosuccinate lyase C-terminal CJO11_RS03855 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJO11_RS03855 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJO11_RS03860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJO11_RS03860 PF14824 Sirohaem biosynthesis protein central CJO11_RS03860 PF10414 Sirohaem synthase dimerisation region CJO11_RS03865 PF00072 Response regulator receiver domain CJO11_RS03880 PF00709 Adenylosuccinate synthetase CJO11_RS03895 PF07859 alpha/beta hydrolase fold CJO11_RS03900 PF13393 Histidyl-tRNA synthetase CJO11_RS03905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO11_RS03905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJO11_RS03905 PF01842 ACT domain CJO11_RS03910 PF00266 Aminotransferase class-V CJO11_RS03920 PF00534 Glycosyl transferases group 1 CJO11_RS03920 PF13439 Glycosyltransferase Family 4 CJO11_RS03930 PF03551 Transcriptional regulator PadR-like family CJO11_RS03935 PF00004 ATPase family associated with various cellular activities (AAA) CJO11_RS03935 PF16193 AAA C-terminal domain CJO11_RS03935 PF12002 MgsA AAA+ ATPase C terminal CJO11_RS03950 PF14489 QueF-like protein CJO11_RS03965 PF01053 Cys/Met metabolism PLP-dependent enzyme CJO11_RS03970 PF00924 Mechanosensitive ion channel CJO11_RS03975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJO11_RS03975 PF10414 Sirohaem synthase dimerisation region CJO11_RS03975 PF14824 Sirohaem biosynthesis protein central CJO11_RS03995 PF01507 Phosphoadenosine phosphosulfate reductase family CJO11_RS04010 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CJO11_RS04015 PF01472 PUA domain CJO11_RS04015 PF00696 Amino acid kinase family CJO11_RS04020 PF01926 50S ribosome-binding GTPase CJO11_RS04020 PF01018 GTP1/OBG CJO11_RS04040 PF01027 Inhibitor of apoptosis-promoting Bax1 CJO11_RS04045 PF03807 NADP oxidoreductase coenzyme F420-dependent CJO11_RS04045 PF14748 Pyrroline-5-carboxylate reductase dimerisation CJO11_RS04060 PF12327 FtsZ family, C-terminal domain CJO11_RS04060 PF00091 Tubulin/FtsZ family, GTPase domain CJO11_RS04065 PF02491 SHS2 domain inserted in FTSA CJO11_RS04070 PF08478 POTRA domain, FtsQ-type CJO11_RS04070 PF03799 Cell division protein FtsQ CJO11_RS04075 PF07478 D-ala D-ala ligase C-terminus CJO11_RS04075 PF01820 D-ala D-ala ligase N-terminus CJO11_RS04080 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CJO11_RS04080 PF01565 FAD binding domain CJO11_RS04085 PF08245 Mur ligase middle domain CJO11_RS04085 PF01225 Mur ligase family, catalytic domain CJO11_RS04085 PF02875 Mur ligase family, glutamate ligase domain CJO11_RS04090 PF03033 Glycosyltransferase family 28 N-terminal domain CJO11_RS04090 PF04101 Glycosyltransferase family 28 C-terminal domain CJO11_RS04095 PF01098 Cell cycle protein CJO11_RS04100 PF08245 Mur ligase middle domain CJO11_RS04100 PF02875 Mur ligase family, glutamate ligase domain CJO11_RS04105 PF00953 Glycosyl transferase family 4 CJO11_RS04105 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CJO11_RS04110 PF08245 Mur ligase middle domain CJO11_RS04110 PF01225 Mur ligase family, catalytic domain CJO11_RS04110 PF02875 Mur ligase family, glutamate ligase domain CJO11_RS04115 PF01225 Mur ligase family, catalytic domain CJO11_RS04115 PF08245 Mur ligase middle domain CJO11_RS04115 PF02875 Mur ligase family, glutamate ligase domain CJO11_RS04120 PF03717 Penicillin-binding Protein dimerisation domain CJO11_RS04120 PF00905 Penicillin binding protein transpeptidase domain CJO11_RS04130 PF01795 MraW methylase family CJO11_RS04135 PF02381 MraZ protein, putative antitoxin-like CJO11_RS04150 PF00291 Pyridoxal-phosphate dependent enzyme CJO11_RS04155 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO11_RS04170 PF01329 Pterin 4 alpha carbinolamine dehydratase CJO11_RS04175 PF00005 ABC transporter CJO11_RS04180 PF03379 CcmB protein CJO11_RS04190 PF00557 Metallopeptidase family M24 CJO11_RS04200 PF00883 Cytosol aminopeptidase family, catalytic domain CJO11_RS04200 PF02789 Cytosol aminopeptidase family, N-terminal domain CJO11_RS04210 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJO11_RS04215 PF00543 Nitrogen regulatory protein P-II CJO11_RS04220 PF00120 Glutamine synthetase, catalytic domain CJO11_RS04220 PF03951 Glutamine synthetase, beta-Grasp domain CJO11_RS04225 PF00034 Cytochrome c CJO11_RS04245 PF01103 Surface antigen CJO11_RS04245 PF17243 POTRA domain TamA domain 1 CJO11_RS04245 PF07244 Surface antigen variable number repeat CJO11_RS04250 PF04377 Arginine-tRNA-protein transferase, C terminus CJO11_RS04250 PF04376 Arginine-tRNA-protein transferase, N terminus CJO11_RS04255 PF13291 ACT domain CJO11_RS04255 PF00291 Pyridoxal-phosphate dependent enzyme CJO11_RS04260 PF01979 Amidohydrolase family CJO11_RS04260 PF13382 Adenine deaminase C-terminal domain CJO11_RS04290 PF00905 Penicillin binding protein transpeptidase domain CJO11_RS04290 PF17092 Penicillin-binding protein OB-like domain CJO11_RS04290 PF00912 Transglycosylase CJO11_RS04300 PF07728 AAA domain (dynein-related subfamily) CJO11_RS04300 PF12556 Cobaltochelatase CobS subunit N terminal CJO11_RS04300 PF08406 CbbQ/NirQ/NorQ C-terminal CJO11_RS04305 PF01638 HxlR-like helix-turn-helix CJO11_RS04310 PF18029 Glyoxalase-like domain CJO11_RS04310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJO11_RS04335 PF00226 DnaJ domain CJO11_RS04340 PF01722 BolA-like protein CJO11_RS04345 PF05726 Pirin C-terminal cupin domain CJO11_RS04345 PF02678 Pirin CJO11_RS04350 PF00106 short chain dehydrogenase CJO11_RS04355 PF00561 alpha/beta hydrolase fold CJO11_RS04370 PF01634 ATP phosphoribosyltransferase CJO11_RS04375 PF00815 Histidinol dehydrogenase CJO11_RS04380 PF01029 NusB family CJO11_RS04385 PF02769 AIR synthase related protein, C-terminal domain CJO11_RS04385 PF00586 AIR synthase related protein, N-terminal domain CJO11_RS04390 PF03030 Inorganic H+ pyrophosphatase CJO11_RS04415 PF08448 PAS fold CJO11_RS04415 PF00563 EAL domain CJO11_RS04415 PF00990 Diguanylate cyclase, GGDEF domain CJO11_RS04420 PF13411 MerR HTH family regulatory protein CJO11_RS04425 PF00216 Bacterial DNA-binding protein CJO11_RS04430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJO11_RS04430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJO11_RS04435 PF02504 Fatty acid synthesis protein CJO11_RS04440 PF01783 Ribosomal L32p protein family CJO11_RS04450 PF00753 Metallo-beta-lactamase superfamily CJO11_RS04480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO11_RS04480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJO11_RS04485 PF01406 tRNA synthetases class I (C) catalytic domain CJO11_RS04495 PF06213 Cobalamin biosynthesis protein CobT CJO11_RS04495 PF11775 Cobalamin biosynthesis protein CobT VWA domain CJO11_RS04500 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJO11_RS04505 PF18074 Primosomal protein N C-terminal domain CJO11_RS04505 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CJO11_RS04505 PF00270 DEAD/DEAH box helicase CJO11_RS04505 PF17764 3′ DNA-binding domain (3′BD) CJO11_RS04515 PF02525 Flavodoxin-like fold CJO11_RS04520 PF02798 Glutathione S-transferase, N-terminal domain CJO11_RS04520 PF00043 Glutathione S-transferase, C-terminal domain CJO11_RS04530 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJO11_RS04530 PF12833 Helix-turn-helix domain CJO11_RS04530 PF02805 Metal binding domain of Ada CJO11_RS04530 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJO11_RS04540 PF02674 Colicin V production protein CJO11_RS04545 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CJO11_RS04550 PF00213 ATP synthase delta (OSCP) subunit CJO11_RS04555 PF00306 ATP synthase alpha/beta chain, C terminal domain CJO11_RS04555 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJO11_RS04555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJO11_RS04560 PF00231 ATP synthase CJO11_RS04565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJO11_RS04565 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJO11_RS04570 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CJO11_RS04595 PF14602 Hexapeptide repeat of succinyl-transferase CJO11_RS04595 PF00132 Bacterial transferase hexapeptide (six repeats) CJO11_RS04595 PF12804 MobA-like NTP transferase domain CJO11_RS04600 PF13419 Haloacid dehalogenase-like hydrolase CJO11_RS04605 PF00106 short chain dehydrogenase CJO11_RS04625 PF00132 Bacterial transferase hexapeptide (six repeats) CJO11_RS04630 PF00308 Bacterial dnaA protein CJO11_RS04640 PF00586 AIR synthase related protein, N-terminal domain CJO11_RS04640 PF02769 AIR synthase related protein, C-terminal domain CJO11_RS04645 PF00551 Formyl transferase CJO11_RS04650 PF04191 Phospholipid methyltransferase CJO11_RS04655 PF00334 Nucleoside diphosphate kinase CJO11_RS04665 PF00883 Cytosol aminopeptidase family, catalytic domain CJO11_RS04665 PF02789 Cytosol aminopeptidase family, N-terminal domain CJO11_RS04670 PF03968 OstA-like protein CJO11_RS04670 PF04453 LPS transport system D CJO11_RS04675 PF00639 PPIC-type PPIASE domain CJO11_RS04675 PF09312 SurA N-terminal domain CJO11_RS04680 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CJO11_RS04685 PF00398 Ribosomal RNA adenine dimethylase CJO11_RS04690 PF01546 Peptidase family M20/M25/M40 CJO11_RS04690 PF07687 Peptidase dimerisation domain CJO11_RS04695 PF04958 Arginine N-succinyltransferase beta subunit CJO11_RS04700 PF04996 Succinylarginine dihydrolase CJO11_RS04715 PF01741 Large-conductance mechanosensitive channel, MscL CJO11_RS04725 PF04536 TPM domain CJO11_RS04740 PF00293 NUDIX domain CJO11_RS04755 PF02463 RecF/RecN/SMC N terminal domain CJO11_RS04765 PF01022 Bacterial regulatory protein, arsR family CJO11_RS04780 PF00313 'Cold-shock' DNA-binding domain CJO11_RS04790 PF03073 TspO/MBR family CJO11_RS04795 PF01479 S4 domain CJO11_RS04795 PF01728 FtsJ-like methyltransferase CJO11_RS04810 PF01063 Amino-transferase class IV CJO11_RS04820 PF00795 Carbon-nitrogen hydrolase CJO11_RS04820 PF02540 NAD synthase CJO11_RS04825 PF02798 Glutathione S-transferase, N-terminal domain CJO11_RS04830 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJO11_RS04830 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CJO11_RS04840 PF06793 Uncharacterised protein family (UPF0262) CJO11_RS04845 PF03796 DnaB-like helicase C terminal domain CJO11_RS04845 PF00772 DnaB-like helicase N terminal domain CJO11_RS04850 PF13091 PLD-like domain CJO11_RS04850 PF13396 Phospholipase_D-nuclease N-terminal CJO11_RS04855 PF01192 RNA polymerase Rpb6 CJO11_RS04860 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJO11_RS04870 PF00004 ATPase family associated with various cellular activities (AAA) CJO11_RS04870 PF17862 AAA+ lid domain CJO11_RS04870 PF01434 Peptidase family M41 CJO11_RS04875 PF01238 Phosphomannose isomerase type I CJO11_RS04880 PF00483 Nucleotidyl transferase CJO11_RS04880 PF01050 Mannose-6-phosphate isomerase CJO11_RS04890 PF00593 TonB dependent receptor CJO11_RS04900 PF07670 Nucleoside recognition CJO11_RS04900 PF07662 Na+ dependent nucleoside transporter C-terminus CJO11_RS04900 PF01773 Na+ dependent nucleoside transporter N-terminus CJO11_RS04910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS04910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS04910 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS04915 PF03060 Nitronate monooxygenase CJO11_RS04930 PF01507 Phosphoadenosine phosphosulfate reductase family CJO11_RS04935 PF00009 Elongation factor Tu GTP binding domain CJO11_RS04945 PF00459 Inositol monophosphatase family CJO11_RS04950 PF01638 HxlR-like helix-turn-helix CJO11_RS04965 PF00444 Ribosomal protein L36 CJO11_RS04970 PF01370 NAD dependent epimerase/dehydratase family CJO11_RS04980 PF18027 Cytosolic carboxypeptidase N-terminal domain CJO11_RS04980 PF00246 Zinc carboxypeptidase CJO11_RS05005 PF00593 TonB dependent receptor CJO11_RS05005 PF07715 TonB-dependent Receptor Plug Domain CJO11_RS05015 PF00486 Transcriptional regulatory protein, C terminal CJO11_RS05015 PF00072 Response regulator receiver domain CJO11_RS05025 PF01081 KDPG and KHG aldolase CJO11_RS05030 PF02685 Glucokinase CJO11_RS05035 PF00920 Dehydratase family CJO11_RS05040 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CJO11_RS05040 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CJO11_RS05045 PF03328 HpcH/HpaI aldolase/citrate lyase family CJO11_RS05050 PF00266 Aminotransferase class-V CJO11_RS05055 PF01979 Amidohydrolase family CJO11_RS05075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS05075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS05075 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS05080 PF00378 Enoyl-CoA hydratase/isomerase CJO11_RS05085 PF02515 CoA-transferase family III CJO11_RS05090 PF03781 Sulfatase-modifying factor enzyme 1 CJO11_RS05095 PF01471 Putative peptidoglycan binding domain CJO11_RS05095 PF03734 L,D-transpeptidase catalytic domain CJO11_RS05105 PF00271 Helicase conserved C-terminal domain CJO11_RS05105 PF00270 DEAD/DEAH box helicase CJO11_RS05120 PF02618 YceG-like family CJO11_RS05125 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO11_RS05125 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO11_RS05130 PF00550 Phosphopantetheine attachment site CJO11_RS05135 PF00152 tRNA synthetases class II (D, K and N) CJO11_RS05135 PF01336 OB-fold nucleic acid binding domain CJO11_RS05135 PF02938 GAD domain CJO11_RS05145 PF01612 3'-5' exonuclease CJO11_RS05145 PF00570 HRDC domain CJO11_RS05150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO11_RS05150 PF03466 LysR substrate binding domain CJO11_RS05155 PF00271 Helicase conserved C-terminal domain CJO11_RS05155 PF00270 DEAD/DEAH box helicase CJO11_RS05165 PF01565 FAD binding domain CJO11_RS05165 PF02913 FAD linked oxidases, C-terminal domain CJO11_RS05180 PF00072 Response regulator receiver domain CJO11_RS05190 PF00180 Isocitrate/isopropylmalate dehydrogenase CJO11_RS05195 PF01494 FAD binding domain CJO11_RS05200 PF02254 TrkA-N domain CJO11_RS05200 PF00999 Sodium/hydrogen exchanger family CJO11_RS05205 PF02272 DHHA1 domain CJO11_RS05205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJO11_RS05205 PF01411 tRNA synthetases class II (A) CJO11_RS05210 PF13649 Methyltransferase domain CJO11_RS05215 PF00154 recA bacterial DNA recombination protein CJO11_RS05220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS05220 PF00072 Response regulator receiver domain CJO11_RS05220 PF13188 PAS domain CJO11_RS05220 PF00512 His Kinase A (phospho-acceptor) domain CJO11_RS05220 PF08448 PAS fold CJO11_RS05230 PF01668 SmpB protein CJO11_RS05245 PF00701 Dihydrodipicolinate synthetase family CJO11_RS05250 PF01464 Transglycosylase SLT domain CJO11_RS05260 PF03449 Transcription elongation factor, N-terminal CJO11_RS05260 PF01272 Transcription elongation factor, GreA/GreB, C-term CJO11_RS05270 PF04055 Radical SAM superfamily CJO11_RS05285 PF01292 Prokaryotic cytochrome b561 CJO11_RS05290 PF00174 Oxidoreductase molybdopterin binding domain CJO11_RS05300 PF01554 MatE CJO11_RS05310 PF00764 Arginosuccinate synthase CJO11_RS05315 PF05036 Sporulation related domain CJO11_RS05315 PF03330 Lytic transglycolase CJO11_RS05335 PF17760 UvrA interaction domain CJO11_RS05335 PF17755 UvrA DNA-binding domain CJO11_RS05355 PF00205 Thiamine pyrophosphate enzyme, central domain CJO11_RS05355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJO11_RS05355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJO11_RS05360 PF05649 Peptidase family M13 CJO11_RS05360 PF01431 Peptidase family M13 CJO11_RS05375 PF01432 Peptidase family M3 CJO11_RS05380 PF00005 ABC transporter CJO11_RS05385 PF01032 FecCD transport family CJO11_RS05395 PF07715 TonB-dependent Receptor Plug Domain CJO11_RS05395 PF00593 TonB dependent receptor CJO11_RS05410 PF00990 Diguanylate cyclase, GGDEF domain CJO11_RS05410 PF08447 PAS fold CJO11_RS05410 PF08448 PAS fold CJO11_RS05410 PF00563 EAL domain CJO11_RS05415 PF00056 lactate/malate dehydrogenase, NAD binding domain CJO11_RS05415 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CJO11_RS05420 PF02629 CoA binding domain CJO11_RS05420 PF00549 CoA-ligase CJO11_RS05425 PF02779 Transketolase, pyrimidine binding domain CJO11_RS05425 PF16870 2-oxoglutarate dehydrogenase C-terminal CJO11_RS05425 PF00676 Dehydrogenase E1 component CJO11_RS05425 PF16078 2-oxoglutarate dehydrogenase N-terminus CJO11_RS05430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJO11_RS05430 PF00364 Biotin-requiring enzyme CJO11_RS05430 PF02817 e3 binding domain CJO11_RS05435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJO11_RS05435 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO11_RS05440 PF01425 Amidase CJO11_RS05445 PF03458 UPF0126 domain CJO11_RS05460 PF01196 Ribosomal protein L17 CJO11_RS05465 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CJO11_RS05465 PF01000 RNA polymerase Rpb3/RpoA insert domain CJO11_RS05465 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CJO11_RS05470 PF00411 Ribosomal protein S11 CJO11_RS05475 PF00416 Ribosomal protein S13/S18 CJO11_RS05485 PF05191 Adenylate kinase, active site lid CJO11_RS05490 PF00344 SecY translocase CJO11_RS05495 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CJO11_RS05500 PF00327 Ribosomal protein L30p/L7e CJO11_RS05505 PF00333 Ribosomal protein S5, N-terminal domain CJO11_RS05505 PF03719 Ribosomal protein S5, C-terminal domain CJO11_RS05510 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CJO11_RS05515 PF00347 Ribosomal protein L6 CJO11_RS05520 PF00410 Ribosomal protein S8 CJO11_RS05525 PF00253 Ribosomal protein S14p/S29e CJO11_RS05530 PF00673 ribosomal L5P family C-terminus CJO11_RS05530 PF00281 Ribosomal protein L5 CJO11_RS05535 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CJO11_RS05535 PF00467 KOW motif CJO11_RS05540 PF00238 Ribosomal protein L14p/L23e CJO11_RS05545 PF00366 Ribosomal protein S17 CJO11_RS05550 PF00831 Ribosomal L29 protein CJO11_RS05555 PF00252 Ribosomal protein L16p/L10e CJO11_RS05560 PF07650 KH domain CJO11_RS05560 PF00189 Ribosomal protein S3, C-terminal domain CJO11_RS05565 PF00237 Ribosomal protein L22p/L17e CJO11_RS05570 PF00203 Ribosomal protein S19 CJO11_RS05575 PF03947 Ribosomal Proteins L2, C-terminal domain CJO11_RS05575 PF00181 Ribosomal Proteins L2, RNA binding domain CJO11_RS05580 PF00276 Ribosomal protein L23 CJO11_RS05585 PF00573 Ribosomal protein L4/L1 family CJO11_RS05590 PF00297 Ribosomal protein L3 CJO11_RS05595 PF00338 Ribosomal protein S10p/S20e CJO11_RS05600 PF03143 Elongation factor Tu C-terminal domain CJO11_RS05600 PF03144 Elongation factor Tu domain 2 CJO11_RS05600 PF00009 Elongation factor Tu GTP binding domain CJO11_RS05605 PF03764 Elongation factor G, domain IV CJO11_RS05605 PF00679 Elongation factor G C-terminus CJO11_RS05605 PF00009 Elongation factor Tu GTP binding domain CJO11_RS05605 PF03144 Elongation factor Tu domain 2 CJO11_RS05605 PF14492 Elongation Factor G, domain II CJO11_RS05610 PF00177 Ribosomal protein S7p/S5e CJO11_RS05615 PF00164 Ribosomal protein S12/S23 CJO11_RS05660 PF00072 Response regulator receiver domain CJO11_RS05665 PF00072 Response regulator receiver domain CJO11_RS05670 PF13426 PAS domain CJO11_RS05670 PF07536 HWE histidine kinase CJO11_RS05670 PF13581 Histidine kinase-like ATPase domain CJO11_RS05680 PF04542 Sigma-70 region 2 CJO11_RS05680 PF08281 Sigma-70, region 4 CJO11_RS05690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CJO11_RS05690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJO11_RS05700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJO11_RS05700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJO11_RS05700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJO11_RS05700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJO11_RS05705 PF06906 Protein of unknown function (DUF1272) CJO11_RS05710 PF08543 Phosphomethylpyrimidine kinase CJO11_RS05710 PF02581 Thiamine monophosphate synthase CJO11_RS05710 PF03070 TENA/THI-4/PQQC family CJO11_RS05715 PF01066 CDP-alcohol phosphatidyltransferase CJO11_RS05730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJO11_RS05730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJO11_RS05730 PF00205 Thiamine pyrophosphate enzyme, central domain CJO11_RS05740 PF00990 Diguanylate cyclase, GGDEF domain CJO11_RS05740 PF00563 EAL domain CJO11_RS05740 PF13188 PAS domain CJO11_RS05740 PF03707 Bacterial signalling protein N terminal repeat CJO11_RS05745 PF01678 Diaminopimelate epimerase CJO11_RS05750 PF00919 Uncharacterized protein family UPF0004 CJO11_RS05750 PF04055 Radical SAM superfamily CJO11_RS05755 PF02881 SRP54-type protein, helical bundle domain CJO11_RS05755 PF00448 SRP54-type protein, GTPase domain CJO11_RS05760 PF04279 Intracellular septation protein A CJO11_RS05775 PF02705 K+ potassium transporter CJO11_RS05785 PF03918 Cytochrome C biogenesis protein CJO11_RS05790 PF08534 Redoxin CJO11_RS05795 PF01578 Cytochrome C assembly protein CJO11_RS05795 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CJO11_RS05800 PF03100 CcmE CJO11_RS05805 PF01578 Cytochrome C assembly protein CJO11_RS05810 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJO11_RS05810 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CJO11_RS05825 PF01197 Ribosomal protein L31 CJO11_RS05830 PF07977 FabA-like domain CJO11_RS05840 PF07244 Surface antigen variable number repeat CJO11_RS05840 PF01103 Surface antigen CJO11_RS05845 PF02163 Peptidase family M50 CJO11_RS05845 PF17820 PDZ domain CJO11_RS05850 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CJO11_RS05850 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CJO11_RS05850 PF13288 DXP reductoisomerase C-terminal domain CJO11_RS05860 PF01255 Putative undecaprenyl diphosphate synthase CJO11_RS05865 PF01765 Ribosome recycling factor CJO11_RS05870 PF00696 Amino acid kinase family CJO11_RS05875 PF00889 Elongation factor TS CJO11_RS05880 PF00318 Ribosomal protein S2 CJO11_RS05890 PF01066 CDP-alcohol phosphatidyltransferase CJO11_RS05895 PF02666 Phosphatidylserine decarboxylase CJO11_RS05900 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJO11_RS05900 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJO11_RS05915 PF00588 SpoU rRNA Methylase family CJO11_RS05915 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJO11_RS05920 PF00216 Bacterial DNA-binding protein CJO11_RS05925 PF00004 ATPase family associated with various cellular activities (AAA) CJO11_RS05925 PF02190 ATP-dependent protease La (LON) substrate-binding domain CJO11_RS05925 PF05362 Lon protease (S16) C-terminal proteolytic domain CJO11_RS05935 PF02575 YbaB/EbfC DNA-binding family CJO11_RS05940 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CJO11_RS05940 PF12170 DNA polymerase III tau subunit V interacting with alpha CJO11_RS05940 PF12169 DNA polymerase III subunits gamma and tau domain III CJO11_RS05955 PF04408 Helicase associated domain (HA2) CJO11_RS05955 PF00270 DEAD/DEAH box helicase CJO11_RS05955 PF00271 Helicase conserved C-terminal domain CJO11_RS05955 PF08482 ATP-dependent helicase C-terminal CJO11_RS05960 PF00348 Polyprenyl synthetase CJO11_RS05965 PF02153 Prephenate dehydrogenase CJO11_RS05965 PF01817 Chorismate mutase type II CJO11_RS05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS05975 PF00072 Response regulator receiver domain CJO11_RS05975 PF00486 Transcriptional regulatory protein, C terminal CJO11_RS05990 PF00005 ABC transporter CJO11_RS05990 PF16326 ABC transporter C-terminal domain CJO11_RS06010 PF13439 Glycosyltransferase Family 4 CJO11_RS06010 PF00534 Glycosyl transferases group 1 CJO11_RS06015 PF07549 SecD/SecF GG Motif CJO11_RS06015 PF02355 Protein export membrane protein CJO11_RS06020 PF02355 Protein export membrane protein CJO11_RS06020 PF07549 SecD/SecF GG Motif CJO11_RS06025 PF02699 Preprotein translocase subunit CJO11_RS06055 PF04820 Tryptophan halogenase CJO11_RS06065 PF02449 Beta-galactosidase CJO11_RS06065 PF08533 Beta-galactosidase C-terminal domain CJO11_RS06065 PF08532 Beta-galactosidase trimerisation domain CJO11_RS06095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJO11_RS06105 PF01081 KDPG and KHG aldolase CJO11_RS06110 PF05035 2-keto-3-deoxy-galactonokinase CJO11_RS06115 PF00171 Aldehyde dehydrogenase family CJO11_RS06130 PF07690 Major Facilitator Superfamily CJO11_RS06135 PF01263 Aldose 1-epimerase CJO11_RS06140 PF00920 Dehydratase family CJO11_RS06150 PF00392 Bacterial regulatory proteins, gntR family CJO11_RS06150 PF07729 FCD domain CJO11_RS06155 PF00703 Glycosyl hydrolases family 2 CJO11_RS06155 PF02929 Beta galactosidase small chain CJO11_RS06155 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CJO11_RS06155 PF16353 Domain of unknown function(DUF4981) CJO11_RS06155 PF02837 Glycosyl hydrolases family 2, sugar binding domain CJO11_RS06160 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CJO11_RS06165 PF04616 Glycosyl hydrolases family 43 CJO11_RS06170 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CJO11_RS06170 PF04616 Glycosyl hydrolases family 43 CJO11_RS06190 PF04820 Tryptophan halogenase CJO11_RS06205 PF00326 Prolyl oligopeptidase family CJO11_RS06205 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CJO11_RS06220 PF07859 alpha/beta hydrolase fold CJO11_RS06230 PF07715 TonB-dependent Receptor Plug Domain CJO11_RS06230 PF00593 TonB dependent receptor CJO11_RS06240 PF00589 Phage integrase family CJO11_RS06240 PF14659 Phage integrase, N-terminal SAM-like domain CJO11_RS06260 PF00462 Glutaredoxin CJO11_RS06275 PF00107 Zinc-binding dehydrogenase CJO11_RS06275 PF08240 Alcohol dehydrogenase GroES-like domain CJO11_RS06280 PF00694 Aconitase C-terminal domain CJO11_RS06290 PF00330 Aconitase family (aconitate hydratase) CJO11_RS06305 PF04116 Fatty acid hydroxylase superfamily CJO11_RS06310 PF00483 Nucleotidyl transferase CJO11_RS06315 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJO11_RS06325 PF01209 ubiE/COQ5 methyltransferase family CJO11_RS06330 PF07690 Major Facilitator Superfamily CJO11_RS06335 PF01274 Malate synthase CJO11_RS06340 PF01641 SelR domain CJO11_RS06345 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CJO11_RS06355 PF00378 Enoyl-CoA hydratase/isomerase CJO11_RS06380 PF17964 Bacterial Ig domain CJO11_RS06380 PF03734 L,D-transpeptidase catalytic domain CJO11_RS06385 PF01171 PP-loop family CJO11_RS06400 PF00391 PEP-utilising enzyme, mobile domain CJO11_RS06400 PF02896 PEP-utilising enzyme, TIM barrel domain CJO11_RS06400 PF05524 PEP-utilising enzyme, N-terminal CJO11_RS06420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJO11_RS06420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJO11_RS06445 PF02445 Quinolinate synthetase A protein CJO11_RS06450 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CJO11_RS06450 PF00413 Matrixin CJO11_RS06450 PF08548 Peptidase M10 serralysin C terminal CJO11_RS06460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJO11_RS06470 PF03099 Biotin/lipoate A/B protein ligase family CJO11_RS06495 PF03960 ArsC family CJO11_RS06500 PF07715 TonB-dependent Receptor Plug Domain CJO11_RS06500 PF00593 TonB dependent receptor CJO11_RS06505 PF01799 [2Fe-2S] binding domain CJO11_RS06505 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO11_RS06510 PF00743 Flavin-binding monooxygenase-like CJO11_RS06515 PF18146 Damage-inducible protein CinA KH domain CJO11_RS06515 PF00994 Probable molybdopterin binding domain CJO11_RS06515 PF02464 Competence-damaged protein CJO11_RS06520 PF00687 Ribosomal protein L1p/L10e family CJO11_RS06525 PF03946 Ribosomal protein L11, N-terminal domain CJO11_RS06525 PF00298 Ribosomal protein L11, RNA binding domain CJO11_RS06530 PF00467 KOW motif CJO11_RS06530 PF02357 Transcription termination factor nusG CJO11_RS06535 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CJO11_RS06560 PF00239 Resolvase, N terminal domain CJO11_RS06560 PF02796 Helix-turn-helix domain of resolvase CJO11_RS06575 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CJO11_RS06595 PF02631 RecX family CJO11_RS06600 PF00501 AMP-binding enzyme CJO11_RS06630 PF13298 DNA polymerase Ligase (LigD) CJO11_RS06630 PF01068 ATP dependent DNA ligase domain CJO11_RS06630 PF04679 ATP dependent DNA ligase C terminal region CJO11_RS06645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS06645 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS06645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS06650 PF00561 alpha/beta hydrolase fold CJO11_RS06665 PF00596 Class II Aldolase and Adducin N-terminal domain CJO11_RS06670 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS06670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS06670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS06675 PF02515 CoA-transferase family III CJO11_RS06680 PF00378 Enoyl-CoA hydratase/isomerase CJO11_RS06685 PF00108 Thiolase, N-terminal domain CJO11_RS06685 PF02803 Thiolase, C-terminal domain CJO11_RS06690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJO11_RS06700 PF16363 GDP-mannose 4,6 dehydratase CJO11_RS06705 PF00483 Nucleotidyl transferase CJO11_RS06710 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJO11_RS06710 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJO11_RS06710 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJO11_RS06715 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJO11_RS06715 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJO11_RS06715 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJO11_RS06720 PF00534 Glycosyl transferases group 1 CJO11_RS06720 PF13439 Glycosyltransferase Family 4 CJO11_RS06735 PF13807 G-rich domain on putative tyrosine kinase CJO11_RS06735 PF13614 AAA domain CJO11_RS06735 PF02706 Chain length determinant protein CJO11_RS06755 PF00132 Bacterial transferase hexapeptide (six repeats) CJO11_RS06770 PF01757 Acyltransferase family CJO11_RS06785 PF03062 MBOAT, membrane-bound O-acyltransferase family CJO11_RS06810 PF04321 RmlD substrate binding domain CJO11_RS06820 PF00005 ABC transporter CJO11_RS06820 PF00664 ABC transporter transmembrane region CJO11_RS06860 PF13673 Acetyltransferase (GNAT) domain CJO11_RS06870 PF00356 Bacterial regulatory proteins, lacI family CJO11_RS06880 PF00128 Alpha amylase, catalytic domain CJO11_RS06910 PF01381 Helix-turn-helix CJO11_RS06915 PF00274 Fructose-bisphosphate aldolase class-I CJO11_RS06925 PF04820 Tryptophan halogenase CJO11_RS06945 PF01081 KDPG and KHG aldolase CJO11_RS06950 PF05035 2-keto-3-deoxy-galactonokinase CJO11_RS06955 PF00171 Aldehyde dehydrogenase family CJO11_RS06960 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CJO11_RS06975 PF07690 Major Facilitator Superfamily CJO11_RS06980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJO11_RS06980 PF13378 Enolase C-terminal domain-like CJO11_RS06990 PF00083 Sugar (and other) transporter CJO11_RS06995 PF17992 Agarase CBM like domain CJO11_RS06995 PF02449 Beta-galactosidase CJO11_RS07000 PF08450 SMP-30/Gluconolactonase/LRE-like region CJO11_RS07005 PF13378 Enolase C-terminal domain-like CJO11_RS07005 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJO11_RS07010 PF00107 Zinc-binding dehydrogenase CJO11_RS07010 PF08240 Alcohol dehydrogenase GroES-like domain CJO11_RS07025 PF08450 SMP-30/Gluconolactonase/LRE-like region CJO11_RS07030 PF07690 Major Facilitator Superfamily CJO11_RS07045 PF00270 DEAD/DEAH box helicase CJO11_RS07045 PF00271 Helicase conserved C-terminal domain CJO11_RS07045 PF08148 DSHCT (NUC185) domain CJO11_RS07065 PF00239 Resolvase, N terminal domain CJO11_RS07065 PF02796 Helix-turn-helix domain of resolvase CJO11_RS07080 PF02540 NAD synthase CJO11_RS07080 PF00795 Carbon-nitrogen hydrolase CJO11_RS07085 PF01625 Peptide methionine sulfoxide reductase CJO11_RS07090 PF00355 Rieske [2Fe-2S] domain CJO11_RS07090 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJO11_RS07095 PF01029 NusB family CJO11_RS07095 PF01189 16S rRNA methyltransferase RsmB/F CJO11_RS07105 PF00067 Cytochrome P450 CJO11_RS07110 PF00762 Ferrochelatase CJO11_RS07120 PF10609 NUBPL iron-transfer P-loop NTPase CJO11_RS07125 PF01145 SPFH domain / Band 7 family CJO11_RS07130 PF01145 SPFH domain / Band 7 family CJO11_RS07135 PF13180 PDZ domain CJO11_RS07140 PF00905 Penicillin binding protein transpeptidase domain CJO11_RS07140 PF17092 Penicillin-binding protein OB-like domain CJO11_RS07140 PF00912 Transglycosylase CJO11_RS07145 PF13417 Glutathione S-transferase, N-terminal domain CJO11_RS07145 PF00043 Glutathione S-transferase, C-terminal domain CJO11_RS07155 PF00171 Aldehyde dehydrogenase family CJO11_RS07160 PF08240 Alcohol dehydrogenase GroES-like domain CJO11_RS07160 PF00107 Zinc-binding dehydrogenase CJO11_RS07170 PF12804 MobA-like NTP transferase domain CJO11_RS07175 PF00623 RNA polymerase Rpb1, domain 2 CJO11_RS07175 PF04998 RNA polymerase Rpb1, domain 5 CJO11_RS07175 PF05000 RNA polymerase Rpb1, domain 4 CJO11_RS07175 PF04983 RNA polymerase Rpb1, domain 3 CJO11_RS07175 PF04997 RNA polymerase Rpb1, domain 1 CJO11_RS07185 PF04561 RNA polymerase Rpb2, domain 2 CJO11_RS07185 PF04565 RNA polymerase Rpb2, domain 3 CJO11_RS07185 PF00562 RNA polymerase Rpb2, domain 6 CJO11_RS07185 PF10385 RNA polymerase beta subunit external 1 domain CJO11_RS07185 PF04563 RNA polymerase beta subunit CJO11_RS07185 PF04560 RNA polymerase Rpb2, domain 7 CJO11_RS07195 PF13443 Cro/C1-type HTH DNA-binding domain CJO11_RS07200 PF00466 Ribosomal protein L10 CJO11_RS07205 PF16320 Ribosomal protein L7/L12 dimerisation domain CJO11_RS07205 PF00542 Ribosomal protein L7/L12 C-terminal domain CJO11_RS07210 PF02254 TrkA-N domain CJO11_RS07210 PF00999 Sodium/hydrogen exchanger family CJO11_RS07215 PF00034 Cytochrome c CJO11_RS07225 PF01554 MatE CJO11_RS07230 PF00166 Chaperonin 10 Kd subunit CJO11_RS07235 PF00118 TCP-1/cpn60 chaperonin family CJO11_RS07240 PF13520 Amino acid permease CJO11_RS07260 PF01367 5'-3' exonuclease, C-terminal SAM fold CJO11_RS07260 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CJO11_RS07260 PF01612 3'-5' exonuclease CJO11_RS07260 PF00476 DNA polymerase family A CJO11_RS07265 PF13426 PAS domain CJO11_RS07265 PF07536 HWE histidine kinase CJO11_RS07265 PF13581 Histidine kinase-like ATPase domain CJO11_RS07275 PF01434 Peptidase family M41 CJO11_RS07275 PF00004 ATPase family associated with various cellular activities (AAA) CJO11_RS07275 PF17862 AAA+ lid domain CJO11_RS07275 PF06480 FtsH Extracellular CJO11_RS07280 PF01144 Coenzyme A transferase CJO11_RS07295 PF01144 Coenzyme A transferase CJO11_RS07300 PF03060 Nitronate monooxygenase CJO11_RS07305 PF07690 Major Facilitator Superfamily CJO11_RS07310 PF02772 S-adenosylmethionine synthetase, central domain CJO11_RS07310 PF02773 S-adenosylmethionine synthetase, C-terminal domain CJO11_RS07310 PF00438 S-adenosylmethionine synthetase, N-terminal domain CJO11_RS07315 PF00795 Carbon-nitrogen hydrolase CJO11_RS07325 PF05175 Methyltransferase small domain CJO11_RS07325 PF17827 PrmC N-terminal domain CJO11_RS07330 PF00472 RF-1 domain CJO11_RS07330 PF03462 PCRF domain CJO11_RS07335 PF13393 Histidyl-tRNA synthetase CJO11_RS07345 PF00719 Inorganic pyrophosphatase CJO11_RS07350 PF01523 Putative modulator of DNA gyrase CJO11_RS07360 PF00005 ABC transporter CJO11_RS07365 PF00309 Sigma-54 factor, Activator interacting domain (AID) CJO11_RS07365 PF04963 Sigma-54 factor, core binding domain CJO11_RS07365 PF04552 Sigma-54, DNA binding domain CJO11_RS07375 PF00486 Transcriptional regulatory protein, C terminal CJO11_RS07375 PF00072 Response regulator receiver domain CJO11_RS07380 PF13545 Crp-like helix-turn-helix domain CJO11_RS07380 PF00027 Cyclic nucleotide-binding domain CJO11_RS07390 PF00155 Aminotransferase class I and II CJO11_RS07400 PF00072 Response regulator receiver domain CJO11_RS07435 PF01258 Prokaryotic dksA/traR C4-type zinc finger CJO11_RS07445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJO11_RS07455 PF03301 Tryptophan 2,3-dioxygenase CJO11_RS07460 PF00581 Rhodanese-like domain CJO11_RS07475 PF01209 ubiE/COQ5 methyltransferase family CJO11_RS07485 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJO11_RS07495 PF01923 Cobalamin adenosyltransferase CJO11_RS07500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJO11_RS07500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJO11_RS07515 PF01624 MutS domain I CJO11_RS07515 PF05192 MutS domain III CJO11_RS07515 PF05190 MutS family domain IV CJO11_RS07515 PF00488 MutS domain V CJO11_RS07515 PF05188 MutS domain II CJO11_RS07520 PF01515 Phosphate acetyl/butaryl transferase CJO11_RS07520 PF00390 Malic enzyme, N-terminal domain CJO11_RS07520 PF03949 Malic enzyme, NAD binding domain CJO11_RS07530 PF02390 Putative methyltransferase CJO11_RS07560 PF04860 Phage portal protein CJO11_RS07640 PF00691 OmpA family CJO11_RS07650 PF06508 Queuosine biosynthesis protein QueC CJO11_RS07660 PF01430 Hsp33 protein CJO11_RS07665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJO11_RS07665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJO11_RS07670 PF00202 Aminotransferase class-III CJO11_RS07675 PF00313 'Cold-shock' DNA-binding domain CJO11_RS07680 PF03471 Transporter associated domain CJO11_RS07680 PF03741 Integral membrane protein TerC family CJO11_RS07695 PF04116 Fatty acid hydroxylase superfamily CJO11_RS07700 PF05199 GMC oxidoreductase CJO11_RS07700 PF00732 GMC oxidoreductase CJO11_RS07705 PF00909 Ammonium Transporter Family CJO11_RS07710 PF00543 Nitrogen regulatory protein P-II CJO11_RS07725 PF11838 ERAP1-like C-terminal domain CJO11_RS07725 PF01433 Peptidase family M1 domain CJO11_RS07730 PF01433 Peptidase family M1 domain CJO11_RS07740 PF00425 chorismate binding enzyme CJO11_RS07740 PF04715 Anthranilate synthase component I, N terminal region CJO11_RS07745 PF00849 RNA pseudouridylate synthase CJO11_RS07750 PF00472 RF-1 domain CJO11_RS07755 PF00471 Ribosomal protein L33 CJO11_RS07770 PF00925 GTP cyclohydrolase II CJO11_RS07770 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CJO11_RS07815 PF02803 Thiolase, C-terminal domain CJO11_RS07815 PF00108 Thiolase, N-terminal domain CJO11_RS07830 PF02559 CarD-like/TRCF domain CJO11_RS07835 PF00037 4Fe-4S binding domain CJO11_RS07835 PF11953 Domain of unknown function (DUF3470) CJO11_RS07850 PF10145 Phage-related minor tail protein CJO11_RS07850 PF01551 Peptidase family M23 CJO11_RS07850 PF01464 Transglycosylase SLT domain CJO11_RS07855 PF00490 Delta-aminolevulinic acid dehydratase CJO11_RS07860 PF13302 Acetyltransferase (GNAT) domain CJO11_RS07875 PF02594 Uncharacterised ACR, YggU family COG1872 CJO11_RS07890 PF07724 AAA domain (Cdc48 subfamily) CJO11_RS07890 PF00004 ATPase family associated with various cellular activities (AAA) CJO11_RS07890 PF10431 C-terminal, D2-small domain, of ClpB protein CJO11_RS07890 PF17871 AAA lid domain CJO11_RS07890 PF02861 Clp amino terminal domain, pathogenicity island component CJO11_RS07900 PF08240 Alcohol dehydrogenase GroES-like domain CJO11_RS07900 PF14765 Polyketide synthase dehydratase CJO11_RS07900 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO11_RS07900 PF00550 Phosphopantetheine attachment site CJO11_RS07900 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO11_RS07900 PF08659 KR domain CJO11_RS07900 PF16197 Ketoacyl-synthetase C-terminal extension CJO11_RS07900 PF00698 Acyl transferase domain CJO11_RS07915 PF00534 Glycosyl transferases group 1 CJO11_RS07915 PF13439 Glycosyltransferase Family 4 CJO11_RS07925 PF13193 AMP-binding enzyme C-terminal domain CJO11_RS07925 PF00501 AMP-binding enzyme CJO11_RS07935 PF08525 Opacity-associated protein A N-terminal motif CJO11_RS07935 PF01551 Peptidase family M23 CJO11_RS07935 PF01476 LysM domain CJO11_RS07940 PF00171 Aldehyde dehydrogenase family CJO11_RS07945 PF00248 Aldo/keto reductase family CJO11_RS07950 PF01467 Cytidylyltransferase-like CJO11_RS07960 PF02590 Predicted SPOUT methyltransferase CJO11_RS07970 PF03572 Peptidase family S41 CJO11_RS07970 PF13180 PDZ domain CJO11_RS07980 PF03232 Ubiquinone biosynthesis protein COQ7 CJO11_RS07990 PF02350 UDP-N-acetylglucosamine 2-epimerase CJO11_RS07995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJO11_RS07995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJO11_RS07995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJO11_RS08000 PF01370 NAD dependent epimerase/dehydratase family CJO11_RS08005 PF02719 Polysaccharide biosynthesis protein CJO11_RS08020 PF13614 AAA domain CJO11_RS08050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJO11_RS08065 PF02397 Bacterial sugar transferase CJO11_RS08070 PF02350 UDP-N-acetylglucosamine 2-epimerase CJO11_RS08075 PF03551 Transcriptional regulator PadR-like family CJO11_RS08075 PF13847 Methyltransferase domain CJO11_RS08085 PF08485 Polysaccharide biosynthesis protein C-terminal CJO11_RS08085 PF02719 Polysaccharide biosynthesis protein CJO11_RS08095 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CJO11_RS08100 PF03631 Virulence factor BrkB CJO11_RS08105 PF01556 DnaJ C terminal domain CJO11_RS08105 PF00684 DnaJ central domain CJO11_RS08105 PF00226 DnaJ domain CJO11_RS08110 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CJO11_RS08110 PF01243 Pyridoxamine 5'-phosphate oxidase CJO11_RS08115 PF16916 Dimerisation domain of Zinc Transporter CJO11_RS08115 PF01545 Cation efflux family CJO11_RS08120 PF02567 Phenazine biosynthesis-like protein CJO11_RS08155 PF01641 SelR domain CJO11_RS08160 PF00067 Cytochrome P450 CJO11_RS08170 PF00005 ABC transporter CJO11_RS08170 PF13732 Domain of unknown function (DUF4162) CJO11_RS08175 PF08331 Domain of unknown function (DUF1730) CJO11_RS08180 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO11_RS08180 PF14759 Reductase C-terminal CJO11_RS08185 PF05088 Bacterial NAD-glutamate dehydrogenase CJO11_RS08190 PF00296 Luciferase-like monooxygenase CJO11_RS08220 PF16655 PhoD-like phosphatase, N-terminal domain CJO11_RS08220 PF09423 PhoD-like phosphatase CJO11_RS08225 PF02824 TGS domain CJO11_RS08225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJO11_RS08225 PF03129 Anticodon binding domain CJO11_RS08225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJO11_RS08235 PF04371 Porphyromonas-type peptidyl-arginine deiminase CJO11_RS08240 PF08335 GlnD PII-uridylyltransferase CJO11_RS08240 PF03710 Glutamate-ammonia ligase adenylyltransferase CJO11_RS08245 PF00578 AhpC/TSA family CJO11_RS08250 PF04305 Protein of unknown function (DUF455) CJO11_RS08255 PF08525 Opacity-associated protein A N-terminal motif CJO11_RS08255 PF01551 Peptidase family M23 CJO11_RS08255 PF01476 LysM domain CJO11_RS08260 PF00501 AMP-binding enzyme CJO11_RS08260 PF13193 AMP-binding enzyme C-terminal domain CJO11_RS08265 PF00067 Cytochrome P450 CJO11_RS08295 PF00133 tRNA synthetases class I (I, L, M and V) CJO11_RS08295 PF13603 Leucyl-tRNA synthetase, Domain 2 CJO11_RS08295 PF08264 Anticodon-binding domain of tRNA CJO11_RS08310 PF02397 Bacterial sugar transferase CJO11_RS08330 PF03167 Uracil DNA glycosylase superfamily CJO11_RS08335 PF00196 Bacterial regulatory proteins, luxR family CJO11_RS08335 PF03472 Autoinducer binding domain CJO11_RS08345 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJO11_RS08345 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO11_RS08350 PF01645 Conserved region in glutamate synthase CJO11_RS08350 PF04898 Glutamate synthase central domain CJO11_RS08350 PF00310 Glutamine amidotransferases class-II CJO11_RS08350 PF01493 GXGXG motif CJO11_RS08360 PF00534 Glycosyl transferases group 1 CJO11_RS08370 PF01575 MaoC like domain CJO11_RS08375 PF02803 Thiolase, C-terminal domain CJO11_RS08375 PF00108 Thiolase, N-terminal domain CJO11_RS08395 PF00005 ABC transporter CJO11_RS08395 PF00664 ABC transporter transmembrane region CJO11_RS08400 PF02673 Bacitracin resistance protein BacA CJO11_RS08415 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CJO11_RS08420 PF03481 Putative GTP-binding controlling metal-binding CJO11_RS08420 PF01300 Telomere recombination CJO11_RS08425 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS08425 PF12806 Acetyl-CoA dehydrogenase C-terminal like CJO11_RS08425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS08425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS08435 PF07995 Glucose / Sorbosone dehydrogenase CJO11_RS08440 PF13185 GAF domain CJO11_RS08470 PF02195 ParB-like nuclease domain CJO11_RS08470 PF17762 HTH domain found in ParB protein CJO11_RS08475 PF13614 AAA domain CJO11_RS08480 PF02527 rRNA small subunit methyltransferase G CJO11_RS08485 PF13932 GidA associated domain CJO11_RS08485 PF01134 Glucose inhibited division protein A CJO11_RS08490 PF01926 50S ribosome-binding GTPase CJO11_RS08490 PF10396 GTP-binding protein TrmE N-terminus CJO11_RS08490 PF12631 MnmE helical domain CJO11_RS08500 PF01738 Dienelactone hydrolase family CJO11_RS08505 PF01645 Conserved region in glutamate synthase CJO11_RS08505 PF13187 4Fe-4S dicluster domain CJO11_RS08525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJO11_RS08525 PF07498 Rho termination factor, N-terminal domain CJO11_RS08525 PF07497 Rho termination factor, RNA-binding domain CJO11_RS08530 PF03653 Uncharacterised protein family (UPF0093) CJO11_RS08535 PF01208 Uroporphyrinogen decarboxylase (URO-D) CJO11_RS08540 PF03618 Kinase/pyrophosphorylase CJO11_RS08545 PF02545 Maf-like protein CJO11_RS08550 PF08501 Shikimate dehydrogenase substrate binding domain CJO11_RS08550 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CJO11_RS08555 PF01121 Dephospho-CoA kinase CJO11_RS08560 PF00929 Exonuclease CJO11_RS08565 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CJO11_RS08565 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CJO11_RS08595 PF01521 Iron-sulphur cluster biosynthesis CJO11_RS08620 PF02321 Outer membrane efflux protein CJO11_RS08635 PF13492 GAF domain CJO11_RS08635 PF07694 5TMR of 5TMR-LYT CJO11_RS08635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS08635 PF06580 Histidine kinase CJO11_RS08640 PF04397 LytTr DNA-binding domain CJO11_RS08640 PF00072 Response regulator receiver domain CJO11_RS08695 PF01435 Peptidase family M48 CJO11_RS08710 PF06580 Histidine kinase CJO11_RS08710 PF07694 5TMR of 5TMR-LYT CJO11_RS08715 PF04397 LytTr DNA-binding domain CJO11_RS08715 PF00072 Response regulator receiver domain CJO11_RS08720 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CJO11_RS08720 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CJO11_RS08730 PF14437 MafB19-like deaminase CJO11_RS08735 PF00830 Ribosomal L28 family CJO11_RS08755 PF13742 OB-fold nucleic acid binding domain CJO11_RS08755 PF02601 Exonuclease VII, large subunit CJO11_RS08760 PF02844 Phosphoribosylglycinamide synthetase, N domain CJO11_RS08760 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CJO11_RS08760 PF02843 Phosphoribosylglycinamide synthetase, C domain CJO11_RS08765 PF05977 Transmembrane secretion effector CJO11_RS08775 PF00294 pfkB family carbohydrate kinase CJO11_RS08790 PF01521 Iron-sulphur cluster biosynthesis CJO11_RS08800 PF01883 Iron-sulfur cluster assembly protein CJO11_RS08805 PF00266 Aminotransferase class-V CJO11_RS08810 PF01458 Uncharacterized protein family (UPF0051) CJO11_RS08815 PF00005 ABC transporter CJO11_RS08835 PF01458 Uncharacterized protein family (UPF0051) CJO11_RS08850 PF01180 Dihydroorotate dehydrogenase CJO11_RS08860 PF00501 AMP-binding enzyme CJO11_RS08875 PF05690 Thiazole biosynthesis protein ThiG CJO11_RS08885 PF02628 Cytochrome oxidase assembly protein CJO11_RS08895 PF00572 Ribosomal protein L13 CJO11_RS08900 PF00380 Ribosomal protein S9/S16 CJO11_RS08920 PF00535 Glycosyl transferase family 2 CJO11_RS08925 PF00535 Glycosyl transferase family 2 CJO11_RS08950 PF13193 AMP-binding enzyme C-terminal domain CJO11_RS08950 PF00501 AMP-binding enzyme CJO11_RS08955 PF01546 Peptidase family M20/M25/M40 CJO11_RS08955 PF07687 Peptidase dimerisation domain CJO11_RS08960 PF00834 Ribulose-phosphate 3 epimerase family CJO11_RS08970 PF02142 MGS-like domain CJO11_RS08970 PF01808 AICARFT/IMPCHase bienzyme CJO11_RS08980 PF01625 Peptide methionine sulfoxide reductase CJO11_RS08995 PF02780 Transketolase, C-terminal domain CJO11_RS08995 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CJO11_RS08995 PF02779 Transketolase, pyrimidine binding domain CJO11_RS09015 PF00854 POT family CJO11_RS09020 PF00392 Bacterial regulatory proteins, gntR family CJO11_RS09020 PF07702 UTRA domain CJO11_RS09025 PF00216 Bacterial DNA-binding protein CJO11_RS09055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO11_RS09060 PF00873 AcrB/AcrD/AcrF family CJO11_RS09065 PF04286 Protein of unknown function (DUF445) CJO11_RS09080 PF00766 Electron transfer flavoprotein FAD-binding domain CJO11_RS09080 PF01012 Electron transfer flavoprotein domain CJO11_RS09085 PF01012 Electron transfer flavoprotein domain CJO11_RS09090 PF00549 CoA-ligase CJO11_RS09090 PF08442 ATP-grasp domain CJO11_RS09095 PF00459 Inositol monophosphatase family CJO11_RS09100 PF00691 OmpA family CJO11_RS09100 PF01389 OmpA-like transmembrane domain CJO11_RS09105 PF03471 Transporter associated domain CJO11_RS09105 PF00571 CBS domain CJO11_RS09105 PF01595 Cyclin M transmembrane N-terminal domain CJO11_RS09115 PF01252 Signal peptidase (SPase) II CJO11_RS09120 PF08264 Anticodon-binding domain of tRNA CJO11_RS09120 PF00133 tRNA synthetases class I (I, L, M and V) CJO11_RS09125 PF01687 Riboflavin kinase CJO11_RS09125 PF06574 FAD synthetase CJO11_RS09130 PF00186 Dihydrofolate reductase CJO11_RS09135 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CJO11_RS09135 PF02222 ATP-grasp domain CJO11_RS09140 PF00731 AIR carboxylase CJO11_RS09145 PF00300 Histidine phosphatase superfamily (branch 1) CJO11_RS09155 PF01212 Beta-eliminating lyase CJO11_RS09160 PF00892 EamA-like transporter family CJO11_RS09170 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CJO11_RS09170 PF11940 Domain of unknown function (DUF3458) Ig-like fold CJO11_RS09170 PF01433 Peptidase family M1 domain CJO11_RS09175 PF02578 Multi-copper polyphenol oxidoreductase laccase CJO11_RS09180 PF00355 Rieske [2Fe-2S] domain CJO11_RS09180 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CJO11_RS09185 PF00033 Cytochrome b/b6/petB CJO11_RS09185 PF00032 Cytochrome b(C-terminal)/b6/petD CJO11_RS09190 PF02167 Cytochrome C1 family CJO11_RS09195 PF00156 Phosphoribosyl transferase domain CJO11_RS09205 PF08534 Redoxin CJO11_RS09210 PF02569 Pantoate-beta-alanine ligase CJO11_RS09215 PF13614 AAA domain CJO11_RS09225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJO11_RS09225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJO11_RS09225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJO11_RS09225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJO11_RS09235 PF00271 Helicase conserved C-terminal domain CJO11_RS09235 PF08494 DEAD/H associated CJO11_RS09235 PF00270 DEAD/DEAH box helicase CJO11_RS09250 PF02472 Biopolymer transport protein ExbD/TolR CJO11_RS09255 PF01618 MotA/TolQ/ExbB proton channel family CJO11_RS09270 PF01842 ACT domain CJO11_RS09270 PF00742 Homoserine dehydrogenase CJO11_RS09270 PF03447 Homoserine dehydrogenase, NAD binding domain CJO11_RS09280 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CJO11_RS09285 PF14572 Phosphoribosyl synthetase-associated domain CJO11_RS09285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CJO11_RS09290 PF00459 Inositol monophosphatase family CJO11_RS09295 PF16347 Domain of unknown function (DUF4976) CJO11_RS09295 PF00884 Sulfatase CJO11_RS09300 PF12849 PBP superfamily domain CJO11_RS09305 PF00230 Major intrinsic protein CJO11_RS09310 PF03960 ArsC family CJO11_RS09315 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase CJO11_RS09320 PF01632 Ribosomal protein L35 CJO11_RS09325 PF00453 Ribosomal protein L20 CJO11_RS09340 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CJO11_RS09340 PF01409 tRNA synthetases class II core domain (F) CJO11_RS09345 PF03483 B3/4 domain CJO11_RS09345 PF03484 tRNA synthetase B5 domain CJO11_RS09345 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CJO11_RS09345 PF01588 Putative tRNA binding domain CJO11_RS09345 PF03147 Ferredoxin-fold anticodon binding domain CJO11_RS09350 PF00106 short chain dehydrogenase CJO11_RS09355 PF00009 Elongation factor Tu GTP binding domain CJO11_RS09355 PF03144 Elongation factor Tu domain 2 CJO11_RS09355 PF16658 Class II release factor RF3, C-terminal domain CJO11_RS09360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS09360 PF00672 HAMP domain CJO11_RS09360 PF00512 His Kinase A (phospho-acceptor) domain CJO11_RS09365 PF00486 Transcriptional regulatory protein, C terminal CJO11_RS09365 PF00072 Response regulator receiver domain CJO11_RS09385 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CJO11_RS09385 PF00326 Prolyl oligopeptidase family CJO11_RS09405 PF01569 PAP2 superfamily CJO11_RS09415 PF00535 Glycosyl transferase family 2 CJO11_RS09450 PF00501 AMP-binding enzyme CJO11_RS09450 PF13193 AMP-binding enzyme C-terminal domain CJO11_RS09450 PF00668 Condensation domain CJO11_RS09450 PF00550 Phosphopantetheine attachment site CJO11_RS09450 PF00975 Thioesterase domain CJO11_RS09455 PF01648 4'-phosphopantetheinyl transferase superfamily CJO11_RS09460 PF01943 Polysaccharide biosynthesis protein CJO11_RS09480 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJO11_RS09480 PF13807 G-rich domain on putative tyrosine kinase CJO11_RS09480 PF02706 Chain length determinant protein CJO11_RS09490 PF02397 Bacterial sugar transferase CJO11_RS09500 PF00072 Response regulator receiver domain CJO11_RS09500 PF00196 Bacterial regulatory proteins, luxR family CJO11_RS09510 PF12706 Beta-lactamase superfamily domain CJO11_RS09525 PF00561 alpha/beta hydrolase fold CJO11_RS09535 PF00884 Sulfatase CJO11_RS09545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS09545 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS09545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS09555 PF07690 Major Facilitator Superfamily CJO11_RS09560 PF04055 Radical SAM superfamily CJO11_RS09565 PF03597 Cytochrome oxidase maturation protein cbb3-type CJO11_RS09570 PF00403 Heavy-metal-associated domain CJO11_RS09575 PF05751 FixH CJO11_RS09580 PF13746 4Fe-4S dicluster domain CJO11_RS09580 PF12801 4Fe-4S binding domain CJO11_RS09580 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CJO11_RS09585 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJO11_RS09585 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CJO11_RS09600 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJO11_RS09605 PF00027 Cyclic nucleotide-binding domain CJO11_RS09605 PF13545 Crp-like helix-turn-helix domain CJO11_RS09625 PF01266 FAD dependent oxidoreductase CJO11_RS09625 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CJO11_RS09630 PF00171 Aldehyde dehydrogenase family CJO11_RS09630 PF14850 DNA-binding domain of Proline dehydrogenase CJO11_RS09630 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CJO11_RS09630 PF01619 Proline dehydrogenase CJO11_RS09635 PF00144 Beta-lactamase CJO11_RS09640 PF00692 dUTPase CJO11_RS09645 PF03435 Saccharopine dehydrogenase NADP binding domain CJO11_RS09650 PF07715 TonB-dependent Receptor Plug Domain CJO11_RS09650 PF00593 TonB dependent receptor CJO11_RS09690 PF08774 VRR-NUC domain CJO11_RS09690 PF04851 Type III restriction enzyme, res subunit CJO11_RS09695 PF18273 Type III R-M EcoP15I C-terminal domain CJO11_RS09695 PF01555 DNA methylase CJO11_RS09745 PF00085 Thioredoxin CJO11_RS09755 PF01914 MarC family integral membrane protein CJO11_RS09765 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CJO11_RS09765 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CJO11_RS09770 PF02325 YGGT family CJO11_RS09775 PF00696 Amino acid kinase family CJO11_RS09815 PF02867 Ribonucleotide reductase, barrel domain CJO11_RS09815 PF00317 Ribonucleotide reductase, all-alpha domain CJO11_RS09815 PF03477 ATP cone domain CJO11_RS09820 PF00561 alpha/beta hydrolase fold CJO11_RS09825 PF00854 POT family CJO11_RS09830 PF00890 FAD binding domain CJO11_RS09830 PF02910 Fumarate reductase flavoprotein C-term CJO11_RS09840 PF00005 ABC transporter CJO11_RS09850 PF01523 Putative modulator of DNA gyrase CJO11_RS09870 PF07690 Major Facilitator Superfamily CJO11_RS09880 PF00067 Cytochrome P450 CJO11_RS09890 PF00485 Phosphoribulokinase / Uridine kinase family CJO11_RS09895 PF00117 Glutamine amidotransferase class-I CJO11_RS09895 PF00958 GMP synthase C terminal domain CJO11_RS09895 PF02540 NAD synthase CJO11_RS09900 PF00501 AMP-binding enzyme CJO11_RS09900 PF13193 AMP-binding enzyme C-terminal domain CJO11_RS09910 PF00204 DNA gyrase B CJO11_RS09910 PF00986 DNA gyrase B subunit, carboxyl terminus CJO11_RS09910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS09910 PF01751 Toprim domain CJO11_RS09915 PF00149 Calcineurin-like phosphoesterase CJO11_RS09930 PF01553 Acyltransferase CJO11_RS09935 PF01039 Carboxyl transferase domain CJO11_RS09940 PF03831 PhnA domain CJO11_RS09940 PF08274 PhnA Zinc-Ribbon CJO11_RS09945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS09945 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS09945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS09950 PF00005 ABC transporter CJO11_RS09955 PF00528 Binding-protein-dependent transport system inner membrane component CJO11_RS09965 PF01790 Prolipoprotein diacylglyceryl transferase CJO11_RS09970 PF00501 AMP-binding enzyme CJO11_RS09970 PF13193 AMP-binding enzyme C-terminal domain CJO11_RS09975 PF03445 Putative nucleotidyltransferase DUF294 CJO11_RS09975 PF08335 GlnD PII-uridylyltransferase CJO11_RS09975 PF01966 HD domain CJO11_RS09985 PF01168 Alanine racemase, N-terminal domain CJO11_RS10000 PF17854 FtsK alpha domain CJO11_RS10000 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CJO11_RS10000 PF01580 FtsK/SpoIIIE family CJO11_RS10000 PF09397 Ftsk gamma domain CJO11_RS10020 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJO11_RS10020 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CJO11_RS10025 PF13717 zinc-ribbon domain CJO11_RS10030 PF00005 ABC transporter CJO11_RS10050 PF02153 Prephenate dehydrogenase CJO11_RS10055 PF00155 Aminotransferase class I and II CJO11_RS10060 PF00561 alpha/beta hydrolase fold CJO11_RS10065 PF07021 Methionine biosynthesis protein MetW CJO11_RS10065 PF00561 alpha/beta hydrolase fold CJO11_RS10070 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJO11_RS10080 PF02657 Fe-S metabolism associated domain CJO11_RS10120 PF04012 PspA/IM30 family CJO11_RS10125 PF00158 Sigma-54 interaction domain CJO11_RS10125 PF02954 Bacterial regulatory protein, Fis family CJO11_RS10130 PF02576 RimP N-terminal domain CJO11_RS10130 PF17384 RimP C-terminal SH3 domain CJO11_RS10135 PF00575 S1 RNA binding domain CJO11_RS10135 PF08529 NusA N-terminal domain CJO11_RS10135 PF13184 NusA-like KH domain CJO11_RS10145 PF11987 Translation-initiation factor 2 CJO11_RS10145 PF08364 Bacterial translation initiation factor IF-2 associated region CJO11_RS10145 PF04760 Translation initiation factor IF-2, N-terminal region CJO11_RS10145 PF00009 Elongation factor Tu GTP binding domain CJO11_RS10160 PF02033 Ribosome-binding factor A CJO11_RS10175 PF00265 Thymidine kinase CJO11_RS10185 PF02163 Peptidase family M50 CJO11_RS10190 PF01509 TruB family pseudouridylate synthase (N terminal domain) CJO11_RS10190 PF16198 tRNA pseudouridylate synthase B C-terminal domain CJO11_RS10195 PF00312 Ribosomal protein S15 CJO11_RS10200 PF00013 KH domain CJO11_RS10200 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CJO11_RS10200 PF01138 3' exoribonuclease family, domain 1 CJO11_RS10200 PF00575 S1 RNA binding domain CJO11_RS10200 PF03725 3' exoribonuclease family, domain 2 CJO11_RS10220 PF01061 ABC-2 type transporter CJO11_RS10240 PF00355 Rieske [2Fe-2S] domain CJO11_RS10240 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJO11_RS10245 PF00676 Dehydrogenase E1 component CJO11_RS10250 PF02779 Transketolase, pyrimidine binding domain CJO11_RS10250 PF02780 Transketolase, C-terminal domain CJO11_RS10255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJO11_RS10255 PF00364 Biotin-requiring enzyme CJO11_RS10255 PF02817 e3 binding domain CJO11_RS10265 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJO11_RS10265 PF00355 Rieske [2Fe-2S] domain CJO11_RS10285 PF00676 Dehydrogenase E1 component CJO11_RS10290 PF02779 Transketolase, pyrimidine binding domain CJO11_RS10290 PF02780 Transketolase, C-terminal domain CJO11_RS10310 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJO11_RS10310 PF00355 Rieske [2Fe-2S] domain CJO11_RS10320 PF00196 Bacterial regulatory proteins, luxR family CJO11_RS10320 PF03472 Autoinducer binding domain CJO11_RS10330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS10330 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS10330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS10345 PF00108 Thiolase, N-terminal domain CJO11_RS10345 PF02803 Thiolase, C-terminal domain CJO11_RS10355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS10355 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS10355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS10360 PF00067 Cytochrome P450 CJO11_RS10370 PF00107 Zinc-binding dehydrogenase CJO11_RS10370 PF16884 N-terminal domain of oxidoreductase CJO11_RS10375 PF01568 Molydopterin dinucleotide binding domain CJO11_RS10375 PF00384 Molybdopterin oxidoreductase CJO11_RS10380 PF00107 Zinc-binding dehydrogenase CJO11_RS10380 PF16884 N-terminal domain of oxidoreductase CJO11_RS10405 PF00890 FAD binding domain CJO11_RS10410 PF00067 Cytochrome P450 CJO11_RS10425 PF00501 AMP-binding enzyme CJO11_RS10425 PF13193 AMP-binding enzyme C-terminal domain CJO11_RS10430 PF03061 Thioesterase superfamily CJO11_RS10445 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJO11_RS10445 PF00355 Rieske [2Fe-2S] domain CJO11_RS10450 PF00107 Zinc-binding dehydrogenase CJO11_RS10450 PF16884 N-terminal domain of oxidoreductase CJO11_RS10455 PF00480 ROK family CJO11_RS10475 PF08281 Sigma-70, region 4 CJO11_RS10475 PF04542 Sigma-70 region 2 CJO11_RS10490 PF12849 PBP superfamily domain CJO11_RS10495 PF00528 Binding-protein-dependent transport system inner membrane component CJO11_RS10500 PF00528 Binding-protein-dependent transport system inner membrane component CJO11_RS10505 PF00005 ABC transporter CJO11_RS10520 PF04820 Tryptophan halogenase CJO11_RS10535 PF04820 Tryptophan halogenase CJO11_RS10540 PF00356 Bacterial regulatory proteins, lacI family CJO11_RS10550 PF14310 Fibronectin type III-like domain CJO11_RS10550 PF00933 Glycosyl hydrolase family 3 N terminal domain CJO11_RS10550 PF01915 Glycosyl hydrolase family 3 C-terminal domain CJO11_RS10570 PF12833 Helix-turn-helix domain CJO11_RS10570 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CJO11_RS10575 PF13426 PAS domain CJO11_RS10575 PF00196 Bacterial regulatory proteins, luxR family CJO11_RS10580 PF12794 Mechanosensitive ion channel inner membrane domain 1 CJO11_RS10580 PF12795 Mechanosensitive ion channel porin domain CJO11_RS10580 PF00924 Mechanosensitive ion channel CJO11_RS10625 PF12307 Protein of unknown function (DUF3631) CJO11_RS10650 PF00155 Aminotransferase class I and II CJO11_RS10665 PF00677 Lumazine binding domain CJO11_RS10670 PF01872 RibD C-terminal domain CJO11_RS10670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJO11_RS10685 PF03692 Putative zinc- or iron-chelating domain CJO11_RS10690 PF02630 SCO1/SenC CJO11_RS10710 PF07664 Ferrous iron transport protein B C terminus CJO11_RS10710 PF02421 Ferrous iron transport protein B CJO11_RS10710 PF07670 Nucleoside recognition CJO11_RS10715 PF00436 Single-strand binding protein family CJO11_RS10735 PF00227 Proteasome subunit CJO11_RS10740 PF00004 ATPase family associated with various cellular activities (AAA) CJO11_RS10740 PF07724 AAA domain (Cdc48 subfamily) CJO11_RS10750 PF13181 Tetratricopeptide repeat CJO11_RS10755 PF07715 TonB-dependent Receptor Plug Domain CJO11_RS10755 PF00593 TonB dependent receptor CJO11_RS10760 PF00005 ABC transporter CJO11_RS10760 PF00664 ABC transporter transmembrane region CJO11_RS10805 PF03466 LysR substrate binding domain CJO11_RS10805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO11_RS10810 PF04116 Fatty acid hydroxylase superfamily CJO11_RS10820 PF13193 AMP-binding enzyme C-terminal domain CJO11_RS10820 PF16177 Acetyl-coenzyme A synthetase N-terminus CJO11_RS10820 PF00501 AMP-binding enzyme CJO11_RS10835 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS10835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS10835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS10840 PF02515 CoA-transferase family III CJO11_RS10850 PF01565 FAD binding domain CJO11_RS10850 PF04030 D-arabinono-1,4-lactone oxidase CJO11_RS10855 PF01168 Alanine racemase, N-terminal domain CJO11_RS10855 PF14031 Putative serine dehydratase domain CJO11_RS10860 PF00378 Enoyl-CoA hydratase/isomerase CJO11_RS10860 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJO11_RS10860 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJO11_RS10865 PF00144 Beta-lactamase CJO11_RS10870 PF13193 AMP-binding enzyme C-terminal domain CJO11_RS10870 PF00501 AMP-binding enzyme CJO11_RS10880 PF00593 TonB dependent receptor CJO11_RS10880 PF07715 TonB-dependent Receptor Plug Domain CJO11_RS10885 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS10885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS10885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS10890 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS10890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS10890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS10900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS10900 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS10900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS10915 PF13417 Glutathione S-transferase, N-terminal domain CJO11_RS10920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO11_RS10920 PF02770 Acyl-CoA dehydrogenase, middle domain CJO11_RS10920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO11_RS10930 PF00829 Ribosomal prokaryotic L21 protein CJO11_RS10940 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CJO11_RS10940 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CJO11_RS10945 PF00814 Glycoprotease family CJO11_RS10950 PF03900 Porphobilinogen deaminase, C-terminal domain CJO11_RS10950 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CJO11_RS10965 PF01494 FAD binding domain CJO11_RS10970 PF00085 Thioredoxin CJO11_RS10970 PF02683 Cytochrome C biogenesis protein transmembrane region CJO11_RS10970 PF11412 Disulphide bond corrector protein DsbC CJO11_RS10985 PF04851 Type III restriction enzyme, res subunit CJO11_RS10985 PF00271 Helicase conserved C-terminal domain CJO11_RS10985 PF17757 UvrB interaction domain CJO11_RS10985 PF02151 UvrB/uvrC motif CJO11_RS10985 PF12344 Ultra-violet resistance protein B CJO11_RS11000 PF08241 Methyltransferase domain CJO11_RS11000 PF12697 Alpha/beta hydrolase family CJO11_RS11005 PF14403 Circularly permuted ATP-grasp type 2 CJO11_RS11015 PF08379 Bacterial transglutaminase-like N-terminal region CJO11_RS11015 PF01841 Transglutaminase-like superfamily CJO11_RS11025 PF00072 Response regulator receiver domain CJO11_RS11025 PF00196 Bacterial regulatory proteins, luxR family CJO11_RS11035 PF00474 Sodium:solute symporter family CJO11_RS11040 PF00291 Pyridoxal-phosphate dependent enzyme CJO11_RS11050 PF00106 short chain dehydrogenase CJO11_RS11080 PF05114 Protein of unknown function (DUF692) CJO11_RS11090 PF03144 Elongation factor Tu domain 2 CJO11_RS11090 PF00009 Elongation factor Tu GTP binding domain CJO11_RS11090 PF00679 Elongation factor G C-terminus CJO11_RS11095 PF07715 TonB-dependent Receptor Plug Domain CJO11_RS11095 PF00593 TonB dependent receptor CJO11_RS11100 PF05656 Protein of unknown function (DUF805) CJO11_RS11110 PF00005 ABC transporter CJO11_RS11115 PF13472 GDSL-like Lipase/Acylhydrolase family CJO11_RS11120 PF11967 Recombination protein O N terminal CJO11_RS11120 PF02565 Recombination protein O C terminal CJO11_RS11125 PF00180 Isocitrate/isopropylmalate dehydrogenase CJO11_RS11130 PF00535 Glycosyl transferase family 2 CJO11_RS11135 PF06965 Na+/H+ antiporter 1 CJO11_RS11150 PF01925 Sulfite exporter TauE/SafE CJO11_RS11170 PF10458 Valyl tRNA synthetase tRNA binding arm CJO11_RS11170 PF00133 tRNA synthetases class I (I, L, M and V) CJO11_RS11170 PF08264 Anticodon-binding domain of tRNA CJO11_RS11175 PF02405 Permease MlaE CJO11_RS11180 PF00005 ABC transporter CJO11_RS11215 PF13419 Haloacid dehalogenase-like hydrolase CJO11_RS11225 PF00849 RNA pseudouridylate synthase CJO11_RS11225 PF01479 S4 domain CJO11_RS11230 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CJO11_RS11235 PF01165 Ribosomal protein S21 CJO11_RS11240 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CJO11_RS11240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJO11_RS11250 PF02686 Glu-tRNAGln amidotransferase C subunit CJO11_RS11255 PF01425 Amidase CJO11_RS11260 PF02637 GatB domain CJO11_RS11260 PF02934 GatB/GatE catalytic domain CJO11_RS11275 PF05193 Peptidase M16 inactive domain CJO11_RS11275 PF00675 Insulinase (Peptidase family M16) CJO11_RS11280 PF00263 Bacterial type II and III secretion system protein CJO11_RS11280 PF03958 Bacterial type II/III secretion system short domain CJO11_RS11280 PF07660 Secretin and TonB N terminus short domain CJO11_RS11280 PF11741 AMIN domain CJO11_RS11295 PF07690 Major Facilitator Superfamily CJO11_RS11300 PF07724 AAA domain (Cdc48 subfamily) CJO11_RS11300 PF10431 C-terminal, D2-small domain, of ClpB protein CJO11_RS11300 PF02861 Clp amino terminal domain, pathogenicity island component CJO11_RS11300 PF17871 AAA lid domain CJO11_RS11300 PF00004 ATPase family associated with various cellular activities (AAA) CJO11_RS11310 PF00593 TonB dependent receptor CJO11_RS11315 PF00108 Thiolase, N-terminal domain CJO11_RS11315 PF02803 Thiolase, C-terminal domain CJO11_RS11320 PF00106 short chain dehydrogenase CJO11_RS11325 PF00378 Enoyl-CoA hydratase/isomerase CJO11_RS11330 PF01048 Phosphorylase superfamily CJO11_RS11335 PF01047 MarR family CJO11_RS11360 PF00263 Bacterial type II and III secretion system protein CJO11_RS11360 PF13629 Pilus formation protein N terminal region CJO11_RS11360 PF04972 BON domain CJO11_RS11380 PF01266 FAD dependent oxidoreductase CJO11_RS11380 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CJO11_RS11385 PF07411 Domain of unknown function (DUF1508) CJO11_RS11390 PF00075 RNase H CJO11_RS11395 PF01636 Phosphotransferase enzyme family CJO11_RS11400 PF02401 LytB protein CJO11_RS11410 PF00750 tRNA synthetases class I (R) CJO11_RS11410 PF05746 DALR anticodon binding domain CJO11_RS11410 PF03485 Arginyl tRNA synthetase N terminal domain CJO11_RS11410 PF00133 tRNA synthetases class I (I, L, M and V) CJO11_RS11425 PF00933 Glycosyl hydrolase family 3 N terminal domain CJO11_RS11430 PF02616 Segregation and condensation protein ScpA CJO11_RS11435 PF04079 Segregation and condensation complex subunit ScpB CJO11_RS11440 PF02416 mttA/Hcf106 family CJO11_RS11445 PF02416 mttA/Hcf106 family CJO11_RS11450 PF00902 Sec-independent protein translocase protein (TatC) CJO11_RS11460 PF00850 Histone deacetylase domain CJO11_RS11470 PF02583 Metal-sensitive transcriptional repressor CJO11_RS11475 PF07732 Multicopper oxidase CJO11_RS11475 PF07731 Multicopper oxidase CJO11_RS11475 PF00394 Multicopper oxidase CJO11_RS11480 PF05275 Copper resistance protein B precursor (CopB) CJO11_RS11485 PF04945 YHS domain CJO11_RS11515 PF00106 short chain dehydrogenase CJO11_RS11525 PF00210 Ferritin-like domain CJO11_RS11530 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CJO11_RS11535 PF00293 NUDIX domain CJO11_RS11540 PF00817 impB/mucB/samB family CJO11_RS11540 PF11799 impB/mucB/samB family C-terminal domain CJO11_RS11540 PF11798 IMS family HHH motif CJO11_RS11545 PF07690 Major Facilitator Superfamily CJO11_RS11550 PF01039 Carboxyl transferase domain CJO11_RS11555 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CJO11_RS11565 PF02785 Biotin carboxylase C-terminal domain CJO11_RS11565 PF00289 Biotin carboxylase, N-terminal domain CJO11_RS11565 PF00364 Biotin-requiring enzyme CJO11_RS11565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJO11_RS11575 PF03641 Possible lysine decarboxylase CJO11_RS11580 PF01593 Flavin containing amine oxidoreductase CJO11_RS11590 PF10755 Protein of unknown function (DUF2585) CJO11_RS11595 PF00072 Response regulator receiver domain CJO11_RS11595 PF00486 Transcriptional regulatory protein, C terminal CJO11_RS11610 PF00743 Flavin-binding monooxygenase-like CJO11_RS11615 PF00743 Flavin-binding monooxygenase-like CJO11_RS11620 PF13667 ThiC-associated domain CJO11_RS11620 PF01964 Radical SAM ThiC family CJO11_RS11655 PF03358 NADPH-dependent FMN reductase CJO11_RS11660 PF02617 ATP-dependent Clp protease adaptor protein ClpS CJO11_RS11670 PF00561 alpha/beta hydrolase fold CJO11_RS11670 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CJO11_RS11675 PF00155 Aminotransferase class I and II CJO11_RS11695 PF04002 RadC-like JAB domain CJO11_RS11700 PF00486 Transcriptional regulatory protein, C terminal CJO11_RS11700 PF00072 Response regulator receiver domain CJO11_RS11705 PF00378 Enoyl-CoA hydratase/isomerase CJO11_RS11725 PF00664 ABC transporter transmembrane region CJO11_RS11725 PF00005 ABC transporter CJO11_RS11730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO11_RS11730 PF00529 HlyD membrane-fusion protein of T1SS CJO11_RS11740 PF01022 Bacterial regulatory protein, arsR family CJO11_RS11745 PF02219 Methylenetetrahydrofolate reductase CJO11_RS11750 PF02310 B12 binding domain CJO11_RS11750 PF02965 Vitamin B12 dependent methionine synthase, activation domain CJO11_RS11750 PF02574 Homocysteine S-methyltransferase CJO11_RS11750 PF00809 Pterin binding enzyme CJO11_RS11750 PF02607 B12 binding domain CJO11_RS11755 PF02574 Homocysteine S-methyltransferase CJO11_RS11755 PF02607 B12 binding domain CJO11_RS11755 PF00809 Pterin binding enzyme CJO11_RS11755 PF02310 B12 binding domain CJO11_RS11755 PF02965 Vitamin B12 dependent methionine synthase, activation domain CJO11_RS11760 PF08669 Glycine cleavage T-protein C-terminal barrel domain CJO11_RS11760 PF01571 Aminomethyltransferase folate-binding domain CJO11_RS11765 PF01597 Glycine cleavage H-protein CJO11_RS11770 PF02347 Glycine cleavage system P-protein CJO11_RS11775 PF00266 Aminotransferase class-V CJO11_RS11795 PF00437 Type II/IV secretion system protein CJO11_RS11815 PF01380 SIS domain CJO11_RS11820 PF00990 Diguanylate cyclase, GGDEF domain CJO11_RS11820 PF00563 EAL domain CJO11_RS11820 PF08447 PAS fold CJO11_RS11820 PF08448 PAS fold CJO11_RS11830 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CJO11_RS11835 PF00675 Insulinase (Peptidase family M16) CJO11_RS11835 PF05193 Peptidase M16 inactive domain CJO11_RS11845 PF01259 SAICAR synthetase CJO11_RS11850 PF00999 Sodium/hydrogen exchanger family CJO11_RS11860 PF03884 DNA gyrase inhibitor YacG CJO11_RS11870 PF02545 Maf-like protein CJO11_RS11875 PF01176 Translation initiation factor 1A / IF-1 CJO11_RS11885 PF13614 AAA domain CJO11_RS11890 PF12697 Alpha/beta hydrolase family CJO11_RS11890 PF08241 Methyltransferase domain CJO11_RS11895 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CJO11_RS11895 PF06974 Protein of unknown function (DUF1298) CJO11_RS11900 PF13520 Amino acid permease CJO11_RS11905 PF02151 UvrB/uvrC motif CJO11_RS11905 PF08459 UvrC Helix-hairpin-helix N-terminal CJO11_RS11905 PF01541 GIY-YIG catalytic domain CJO11_RS11910 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO11_RS11910 PF01799 [2Fe-2S] binding domain CJO11_RS11915 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJO11_RS11935 PF01740 STAS domain CJO11_RS11935 PF00916 Sulfate permease family CJO11_RS11940 PF00919 Uncharacterized protein family UPF0004 CJO11_RS11940 PF18693 TRAM domain CJO11_RS11940 PF04055 Radical SAM superfamily CJO11_RS11955 PF01975 Survival protein SurE CJO11_RS11960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJO11_RS11960 PF02403 Seryl-tRNA synthetase N-terminal domain CJO11_RS11965 PF02895 Signal transducing histidine kinase, homodimeric domain CJO11_RS11965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS11965 PF01627 Hpt domain CJO11_RS11965 PF07194 P2 response regulator binding domain CJO11_RS11965 PF01584 CheW-like domain CJO11_RS11975 PF00072 Response regulator receiver domain CJO11_RS11980 PF01339 CheB methylesterase CJO11_RS11980 PF00072 Response regulator receiver domain CJO11_RS11985 PF01739 CheR methyltransferase, SAM binding domain CJO11_RS11985 PF03705 CheR methyltransferase, all-alpha domain CJO11_RS11990 PF00990 Diguanylate cyclase, GGDEF domain CJO11_RS11990 PF00563 EAL domain CJO11_RS11990 PF08447 PAS fold CJO11_RS11990 PF08448 PAS fold CJO11_RS11995 PF08269 Cache domain CJO11_RS11995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO11_RS12035 PF02384 N-6 DNA Methylase CJO11_RS12045 PF01343 Peptidase family S49 CJO11_RS12050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJO11_RS12050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJO11_RS12055 PF01979 Amidohydrolase family CJO11_RS12070 PF13614 AAA domain CJO11_RS12080 PF04235 Protein of unknown function (DUF418) CJO11_RS12085 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CJO11_RS12085 PF01926 50S ribosome-binding GTPase CJO11_RS12105 PF05697 Bacterial trigger factor protein (TF) CJO11_RS12105 PF05698 Bacterial trigger factor protein (TF) C-terminus CJO11_RS12105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJO11_RS12115 PF01425 Amidase CJO11_RS12125 PF00574 Clp protease CJO11_RS12130 PF07724 AAA domain (Cdc48 subfamily) CJO11_RS12130 PF10431 C-terminal, D2-small domain, of ClpB protein CJO11_RS12130 PF06689 ClpX C4-type zinc finger CJO11_RS12140 PF01545 Cation efflux family CJO11_RS12145 PF00912 Transglycosylase CJO11_RS12160 PF04542 Sigma-70 region 2 CJO11_RS12160 PF00140 Sigma-70 factor, region 1.2 CJO11_RS12160 PF04545 Sigma-70, region 4 CJO11_RS12165 PF00849 RNA pseudouridylate synthase CJO11_RS12175 PF00551 Formyl transferase CJO11_RS12180 PF10090 Histidine phosphotransferase C-terminal domain CJO11_RS12185 PF01510 N-acetylmuramoyl-L-alanine amidase CJO11_RS12190 PF02627 Carboxymuconolactone decarboxylase family CJO11_RS12200 PF00149 Calcineurin-like phosphoesterase CJO11_RS12215 PF03600 Citrate transporter CJO11_RS12235 PF01053 Cys/Met metabolism PLP-dependent enzyme CJO11_RS12240 PF04379 ApaG domain CJO11_RS12245 PF02541 Ppx/GppA phosphatase family CJO11_RS12250 PF13090 Polyphosphate kinase C-terminal domain 2 CJO11_RS12250 PF02503 Polyphosphate kinase middle domain CJO11_RS12250 PF13089 Polyphosphate kinase N-terminal domain CJO11_RS12250 PF17941 Polyphosphate kinase C-terminal domain 1 CJO11_RS12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO11_RS12255 PF03466 LysR substrate binding domain CJO11_RS12260 PF02463 RecF/RecN/SMC N terminal domain CJO11_RS12280 PF00730 HhH-GPD superfamily base excision DNA repair protein CJO11_RS12280 PF00633 Helix-hairpin-helix motif CJO11_RS12280 PF10576 Iron-sulfur binding domain of endonuclease III CJO11_RS12280 PF14815 NUDIX domain CJO11_RS12290 PF00144 Beta-lactamase CJO11_RS12295 PF09297 NADH pyrophosphatase zinc ribbon domain CJO11_RS12295 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CJO11_RS12295 PF00293 NUDIX domain CJO11_RS12305 PF00106 short chain dehydrogenase CJO11_RS12310 PF08031 Berberine and berberine like CJO11_RS12310 PF01565 FAD binding domain CJO11_RS12320 PF03448 MgtE intracellular N domain CJO11_RS12320 PF01769 Divalent cation transporter CJO11_RS12320 PF00571 CBS domain CJO11_RS12325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJO11_RS12330 PF03466 LysR substrate binding domain CJO11_RS12330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO11_RS12335 PF00571 CBS domain CJO11_RS12335 PF03471 Transporter associated domain CJO11_RS12340 PF02130 Uncharacterized protein family UPF0054 CJO11_RS12350 PF02562 PhoH-like protein CJO11_RS12360 PF00171 Aldehyde dehydrogenase family CJO11_RS12365 PF12697 Alpha/beta hydrolase family CJO11_RS12370 PF17103 Stealth protein CR4, conserved region 4 CJO11_RS12370 PF11380 Stealth protein CR2, conserved region 2 CJO11_RS12370 PF17102 Stealth protein CR3, conserved region 3 CJO11_RS12370 PF17101 Stealth protein CR1, conserved region 1 CJO11_RS12370 PF00534 Glycosyl transferases group 1 CJO11_RS12395 PF04107 Glutamate-cysteine ligase family 2(GCS2) CJO11_RS12400 PF04452 RNA methyltransferase CJO11_RS12405 PF01040 UbiA prenyltransferase family CJO11_RS12420 PF13840 ACT domain CJO11_RS12420 PF01842 ACT domain CJO11_RS12420 PF00696 Amino acid kinase family CJO11_RS12425 PF02222 ATP-grasp domain CJO11_RS12430 PF03060 Nitronate monooxygenase CJO11_RS12450 PF01078 Magnesium chelatase, subunit ChlI CJO11_RS12450 PF13335 Magnesium chelatase, subunit ChlI C-terminal CJO11_RS12460 PF00468 Ribosomal protein L34 CJO11_RS12465 PF00825 Ribonuclease P CJO11_RS12470 PF01809 Putative membrane protein insertion efficiency factor CJO11_RS12475 PF02096 60Kd inner membrane protein CJO11_RS12475 PF14849 YidC periplasmic domain CJO11_RS12480 PF01926 50S ribosome-binding GTPase CJO11_RS12495 PF13417 Glutathione S-transferase, N-terminal domain CJO11_RS12495 PF00043 Glutathione S-transferase, C-terminal domain CJO11_RS12510 PF01546 Peptidase family M20/M25/M40 CJO11_RS12510 PF07687 Peptidase dimerisation domain CJO11_RS12515 PF00375 Sodium:dicarboxylate symporter family CJO11_RS12525 PF09278 MerR, DNA binding CJO11_RS12525 PF00376 MerR family regulatory protein CJO11_RS12540 PF00929 Exonuclease CJO11_RS12540 PF13307 Helicase C-terminal domain CJO11_RS12540 PF04851 Type III restriction enzyme, res subunit CJO11_RS12550 PF01921 tRNA synthetases class I (K) CJO11_RS12575 PF00654 Voltage gated chloride channel CJO11_RS12585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJO11_RS12595 PF00005 ABC transporter CJO11_RS12595 PF12848 ABC transporter CJO11_RS12605 PF10609 NUBPL iron-transfer P-loop NTPase CJO11_RS12610 PF04976 DMSO reductase anchor subunit (DmsC) CJO11_RS12615 PF13247 4Fe-4S dicluster domain CJO11_RS12615 PF12800 4Fe-4S binding domain CJO11_RS12620 PF01568 Molydopterin dinucleotide binding domain CJO11_RS12620 PF00384 Molybdopterin oxidoreductase CJO11_RS12620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJO11_RS12630 PF01206 Sulfurtransferase TusA CJO11_RS12635 PF13686 DsrE/DsrF/DrsH-like family CJO11_RS12640 PF00850 Histone deacetylase domain CJO11_RS12655 PF03099 Biotin/lipoate A/B protein ligase family CJO11_RS12680 PF04324 BFD-like [2Fe-2S] binding domain CJO11_RS12680 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO11_RS12695 PF02754 Cysteine-rich domain CJO11_RS12705 PF01597 Glycine cleavage H-protein CJO11_RS12710 PF01022 Bacterial regulatory protein, arsR family CJO11_RS12720 PF02321 Outer membrane efflux protein CJO11_RS12730 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO11_RS12735 PF00581 Rhodanese-like domain CJO11_RS12735 PF11127 Protein of unknown function (DUF2892) CJO11_RS12745 PF00873 AcrB/AcrD/AcrF family CJO11_RS12750 PF00085 Thioredoxin CJO11_RS12755 PF01022 Bacterial regulatory protein, arsR family CJO11_RS12760 PF00578 AhpC/TSA family CJO11_RS12760 PF10417 C-terminal domain of 1-Cys peroxiredoxin CJO11_RS12765 PF00753 Metallo-beta-lactamase superfamily CJO11_RS12785 PF00512 His Kinase A (phospho-acceptor) domain CJO11_RS12785 PF00989 PAS fold CJO11_RS12785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS12790 PF01037 Lrp/AsnC ligand binding domain CJO11_RS12800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJO11_RS12800 PF00289 Biotin carboxylase, N-terminal domain CJO11_RS12800 PF02785 Biotin carboxylase C-terminal domain CJO11_RS12805 PF00364 Biotin-requiring enzyme CJO11_RS12810 PF01220 Dehydroquinase class II CJO11_RS12820 PF01416 tRNA pseudouridine synthase CJO11_RS12825 PF00551 Formyl transferase CJO11_RS12825 PF02911 Formyl transferase, C-terminal domain CJO11_RS12830 PF02132 RecR protein CJO11_RS12830 PF13662 Toprim domain CJO11_RS12835 PF01327 Polypeptide deformylase CJO11_RS12840 PF02646 RmuC family CJO11_RS12855 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJO11_RS12855 PF00588 SpoU rRNA Methylase family CJO11_RS12860 PF00381 PTS HPr component phosphorylation site CJO11_RS12865 PF03610 PTS system fructose IIA component CJO11_RS12865 PF03830 PTS system sorbose subfamily IIB component CJO11_RS12870 PF03668 P-loop ATPase protein family CJO11_RS12875 PF02603 HPr Serine kinase N terminus CJO11_RS12875 PF07475 HPr Serine kinase C-terminal domain CJO11_RS12880 PF00512 His Kinase A (phospho-acceptor) domain CJO11_RS12880 PF13755 Sensor N-terminal transmembrane domain CJO11_RS12880 PF00672 HAMP domain CJO11_RS12880 PF13756 Stimulus-sensing domain CJO11_RS12880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO11_RS12885 PF00072 Response regulator receiver domain CJO11_RS12885 PF00486 Transcriptional regulatory protein, C terminal CJO11_RS12890 PF01293 Phosphoenolpyruvate carboxykinase CJO11_RS12910 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CJO11_RS12915 PF00266 Aminotransferase class-V CJO11_RS12920 PF00266 Aminotransferase class-V CJO11_RS12925 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO11_RS12940 PF04333 MlaA lipoprotein CJO11_RS12945 PF03989 DNA gyrase C-terminal domain, beta-propeller CJO11_RS12945 PF00521 DNA gyrase/topoisomerase IV, subunit A CJO11_RS12955 PF01176 Translation initiation factor 1A / IF-1 CJO11_RS12970 PF00313 'Cold-shock' DNA-binding domain CJO11_RS13010 PF00356 Bacterial regulatory proteins, lacI family CJO11_RS13015 PF04820 Tryptophan halogenase CJO11_RS13020 PF10566 Glycoside hydrolase 97 CJO11_RS13020 PF14508 Glycosyl-hydrolase 97 N-terminal CJO11_RS13020 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CJO11_RS13025 PF00128 Alpha amylase, catalytic domain CJO11_RS13030 PF00128 Alpha amylase, catalytic domain CJO11_RS13030 PF02806 Alpha amylase, C-terminal all-beta domain CJO11_RS13030 PF03714 Bacterial pullanase-associated domain CJO11_RS13035 PF04820 Tryptophan halogenase CJO11_RS13045 PF00356 Bacterial regulatory proteins, lacI family CJO11_RS13055 PF11896 Domain of unknown function (DUF3416) CJO11_RS13055 PF00128 Alpha amylase, catalytic domain CJO11_RS13070 PF08525 Opacity-associated protein A N-terminal motif CJO11_RS13070 PF01551 Peptidase family M23 CJO11_RS13070 PF01476 LysM domain CJO11_RS13095 PF00437 Type II/IV secretion system protein CJO11_RS13125 PF04972 BON domain CJO11_RS13125 PF00263 Bacterial type II and III secretion system protein CJO11_RS13125 PF13629 Pilus formation protein N terminal region