CJO11_RS00020 SM00382 ATPases associated with a variety of cellular activities CJO11_RS00055 SM01092 CO dehydrogenase flavoprotein C-terminal domain CJO11_RS00060 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJO11_RS00080 SM00857 Resolvase, N terminal domain CJO11_RS00130 SM00861 Transketolase, pyrimidine binding domain CJO11_RS00165 SM00861 Transketolase, pyrimidine binding domain CJO11_RS00170 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJO11_RS00240 SM00271 DnaJ molecular chaperone homology domain CJO11_RS00245 SM00226 Low molecular weight phosphatase family CJO11_RS00260 SM00382 ATPases associated with a variety of cellular activities CJO11_RS00280 SM01005 Alanine racemase, C-terminal domain CJO11_RS00290 SM00946 Prolyl-tRNA synthetase, C-terminal CJO11_RS00300 SM00955 CJO11_RS00300 CJO11_RS00360 SM00853 MutL C terminal dimerisation domain CJO11_RS00360 SM01340 CJO11_RS00360 CJO11_RS00400 SM00465 GIY-YIG type nucleases (URI domain) CJO11_RS00465 SM00422 helix_turn_helix, mercury resistance CJO11_RS00480 SM00028 Tetratricopeptide repeats CJO11_RS00480 SM00862 Transcriptional regulatory protein, C terminal CJO11_RS00485 SM00729 Elongator protein 3, MiaB family, Radical SAM CJO11_RS00495 SM00852 Probable molybdopterin binding domain CJO11_RS00600 SM00382 ATPases associated with a variety of cellular activities CJO11_RS00680 SM00646 CJO11_RS00680 CJO11_RS00695 SM00937 CJO11_RS00695 CJO11_RS00710 SM00917 LeuA allosteric (dimerisation) domain CJO11_RS00805 SM00382 ATPases associated with a variety of cellular activities CJO11_RS00835 SM00363 S4 RNA-binding domain CJO11_RS00835 SM01390 CJO11_RS00835 CJO11_RS00840 SM00830 Chorismate mutase type II CJO11_RS00870 SM00530 Helix-turn-helix XRE-family like proteins CJO11_RS00880 SM00400 zinc finger CJO11_RS00880 SM00493 CJO11_RS00880 CJO11_RS00885 SM00465 GIY-YIG type nucleases (URI domain) CJO11_RS00895 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CJO11_RS00905 SM00851 MGS-like domain CJO11_RS00905 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CJO11_RS00945 SM01192 CJO11_RS00945 CJO11_RS00945 SM01193 CJO11_RS00945 CJO11_RS00955 SM00587 ZnF_C4 abd HLH domain containing kinases domain CJO11_RS00995 SM00936 Penicillin-binding protein 5, C-terminal domain CJO11_RS01020 SM00849 Metallo-beta-lactamase superfamily CJO11_RS01040 SM00382 ATPases associated with a variety of cellular activities CJO11_RS01040 SM00448 cheY-homologous receiver domain CJO11_RS01045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJO11_RS01045 SM00387 Histidine kinase-like ATPases CJO11_RS01045 SM00388 His Kinase A (phosphoacceptor) domain CJO11_RS01050 SM00382 ATPases associated with a variety of cellular activities CJO11_RS01050 SM00448 cheY-homologous receiver domain CJO11_RS01055 SM00091 PAS domain CJO11_RS01055 SM00387 Histidine kinase-like ATPases CJO11_RS01055 SM00388 His Kinase A (phosphoacceptor) domain CJO11_RS01080 SM00729 Elongator protein 3, MiaB family, Radical SAM CJO11_RS01085 SM00947 Carbonic anhydrase CJO11_RS01100 SM00434 DNA Topoisomerase IV CJO11_RS01160 SM00861 Transketolase, pyrimidine binding domain CJO11_RS01265 SM00852 Probable molybdopterin binding domain CJO11_RS01295 SM00387 Histidine kinase-like ATPases CJO11_RS01325 SM00849 Metallo-beta-lactamase superfamily CJO11_RS01380 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJO11_RS01385 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CJO11_RS01430 SM00287 Bacterial SH3 domain homologues CJO11_RS01490 SM00387 Histidine kinase-like ATPases CJO11_RS01490 SM00388 His Kinase A (phosphoacceptor) domain CJO11_RS01500 SM00448 cheY-homologous receiver domain CJO11_RS01500 SM00862 Transcriptional regulatory protein, C terminal CJO11_RS01515 SM00481 DNA polymerase alpha chain like domain CJO11_RS01555 SM00028 Tetratricopeptide repeats CJO11_RS01560 SM00382 ATPases associated with a variety of cellular activities CJO11_RS01560 SM00448 cheY-homologous receiver domain CJO11_RS01565 SM00387 Histidine kinase-like ATPases CJO11_RS01575 SM00530 Helix-turn-helix XRE-family like proteins CJO11_RS01605 SM00841 Elongation factor P, C-terminal CJO11_RS01605 SM01185 CJO11_RS01605 CJO11_RS01615 SM00729 Elongator protein 3, MiaB family, Radical SAM CJO11_RS01645 SM00387 Histidine kinase-like ATPases CJO11_RS01645 SM00433 TopoisomeraseII CJO11_RS01660 SM00382 ATPases associated with a variety of cellular activities CJO11_RS01670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CJO11_RS01740 SM00481 DNA polymerase alpha chain like domain CJO11_RS01755 SM00382 ATPases associated with a variety of cellular activities CJO11_RS01770 SM00822 CJO11_RS01770 CJO11_RS01815 SM00028 Tetratricopeptide repeats CJO11_RS01825 SM00116 Domain in cystathionine beta-synthase and other proteins. CJO11_RS01825 SM01240 CJO11_RS01825 CJO11_RS01890 SM00292 breast cancer carboxy-terminal domain CJO11_RS01890 SM00532 Ligase N family CJO11_RS01910 SM00052 Putative diguanylate phosphodiesterase CJO11_RS01910 SM00267 diguanylate cyclase CJO11_RS01935 SM00957 SecA DEAD-like domain CJO11_RS01935 SM00958 SecA preprotein cross-linking domain CJO11_RS01985 SM00387 Histidine kinase-like ATPases CJO11_RS01985 SM00388 His Kinase A (phosphoacceptor) domain CJO11_RS01990 SM00996 S-adenosyl-L-homocysteine hydrolase CJO11_RS01990 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CJO11_RS02075 SM00878 Biotin carboxylase C-terminal domain CJO11_RS02085 SM00729 Elongator protein 3, MiaB family, Radical SAM CJO11_RS02085 SM00876 Biotin and Thiamin Synthesis associated domain CJO11_RS02115 SM00530 Helix-turn-helix XRE-family like proteins CJO11_RS02140 SM00487 DEAD-like helicases superfamily CJO11_RS02140 SM00490 helicase superfamily c-terminal domain CJO11_RS02150 SM00358 Double-stranded RNA binding motif CJO11_RS02150 SM00535 Ribonuclease III family CJO11_RS02165 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CJO11_RS02165 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CJO11_RS02165 SM00493 CJO11_RS02165 CJO11_RS02180 SM01207 CJO11_RS02180 CJO11_RS02205 SM00052 Putative diguanylate phosphodiesterase CJO11_RS02205 SM00267 diguanylate cyclase CJO11_RS02235 SM00267 diguanylate cyclase CJO11_RS02315 SM00932 Scaffold protein Nfu/NifU N terminal CJO11_RS02340 SM00563 Phosphate acyltransferases CJO11_RS02345 SM00729 Elongator protein 3, MiaB family, Radical SAM CJO11_RS02390 SM00487 DEAD-like helicases superfamily CJO11_RS02390 SM00490 helicase superfamily c-terminal domain CJO11_RS02405 SM00487 DEAD-like helicases superfamily CJO11_RS02405 SM00490 helicase superfamily c-terminal domain CJO11_RS02405 SM00982 CJO11_RS02405 CJO11_RS02405 SM01058 CarD-like/TRCF domain CJO11_RS02410 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CJO11_RS02410 SM00091 PAS domain CJO11_RS02410 SM00387 Histidine kinase-like ATPases CJO11_RS02410 SM00388 His Kinase A (phosphoacceptor) domain CJO11_RS02410 SM00448 cheY-homologous receiver domain CJO11_RS02445 SM00052 Putative diguanylate phosphodiesterase CJO11_RS02445 SM00267 diguanylate cyclase CJO11_RS02450 SM00052 Putative diguanylate phosphodiesterase CJO11_RS02450 SM00091 PAS domain CJO11_RS02450 SM00267 diguanylate cyclase CJO11_RS02475 SM00829 Enoylreductase CJO11_RS02485 SM00480 DNA polymerase III beta subunit CJO11_RS02490 SM00822 CJO11_RS02490 CJO11_RS02500 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CJO11_RS02565 SM00347 helix_turn_helix multiple antibiotic resistance protein CJO11_RS02585 SM00859 Semialdehyde dehydrogenase, NAD binding domain CJO11_RS02625 SM00382 ATPases associated with a variety of cellular activities CJO11_RS02625 SM00962 SRP54-type protein, GTPase domain CJO11_RS02625 SM00963 SRP54-type protein, helical bundle domain CJO11_RS02660 SM00316 Ribosomal protein S1-like RNA-binding domain CJO11_RS02665 SM00849 Metallo-beta-lactamase superfamily CJO11_RS02670 SM00829 Enoylreductase CJO11_RS02725 SM00028 Tetratricopeptide repeats CJO11_RS02730 SM00998 Adenylosuccinate lyase C-terminus CJO11_RS02740 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CJO11_RS02790 SM00363 S4 RNA-binding domain CJO11_RS02855 SM00382 ATPases associated with a variety of cellular activities CJO11_RS02940 SM00450 Rhodanese Homology Domain CJO11_RS02955 SM00382 ATPases associated with a variety of cellular activities CJO11_RS02965 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CJO11_RS02980 SM00450 Rhodanese Homology Domain CJO11_RS02995 SM00925 MltA specific insert domain CJO11_RS03000 SM00978 CJO11_RS03000 CJO11_RS03055 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CJO11_RS03055 SM01232 CJO11_RS03055 CJO11_RS03065 SM00760 Bacterial dnaA protein helix-turn-helix domain CJO11_RS03105 SM00478 endonuclease III CJO11_RS03180 SM00564 beta-propeller repeat CJO11_RS03190 SM00244 prohibitin homologues CJO11_RS03260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJO11_RS03260 SM00387 Histidine kinase-like ATPases CJO11_RS03260 SM00388 His Kinase A (phosphoacceptor) domain CJO11_RS03265 SM00448 cheY-homologous receiver domain CJO11_RS03265 SM00862 Transcriptional regulatory protein, C terminal CJO11_RS03295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJO11_RS03295 SM00954 Region found in RelA / SpoT proteins CJO11_RS03315 SM01263 CJO11_RS03315 CJO11_RS03355 SM00271 DnaJ molecular chaperone homology domain CJO11_RS03440 SM00072 Guanylate kinase homologues. CJO11_RS03450 SM00862 Transcriptional regulatory protein, C terminal CJO11_RS03495 SM00829 Enoylreductase CJO11_RS03535 SM00151 SWI complex, BAF60b domains CJO11_RS03590 SM00729 Elongator protein 3, MiaB family, Radical SAM CJO11_RS03600 SM00905 Dihydroneopterin aldolase CJO11_RS03685 SM00732 Likely ribonuclease with RNase H fold. CJO11_RS03705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJO11_RS03715 SM00710 Parallel beta-helix repeats CJO11_RS03735 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CJO11_RS03735 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CJO11_RS03745 SM00382 ATPases associated with a variety of cellular activities CJO11_RS03745 SM00448 cheY-homologous receiver domain CJO11_RS03765 SM00342 helix_turn_helix, arabinose operon control protein CJO11_RS03825 SM00829 Enoylreductase CJO11_RS03830 SM00870 CJO11_RS03830 CJO11_RS03865 SM00448 cheY-homologous receiver domain CJO11_RS03880 SM00788 Adenylosuccinate synthetase CJO11_RS03935 SM00382 ATPases associated with a variety of cellular activities CJO11_RS03960 SM00450 Rhodanese Homology Domain CJO11_RS04015 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CJO11_RS04060 SM00864 Tubulin/FtsZ family, GTPase domain CJO11_RS04060 SM00865 Tubulin/FtsZ family, C-terminal domain CJO11_RS04065 SM00842 Cell division protein FtsA CJO11_RS04160 SM00478 endonuclease III CJO11_RS04175 SM00382 ATPases associated with a variety of cellular activities CJO11_RS04210 SM00859 Semialdehyde dehydrogenase, NAD binding domain CJO11_RS04215 SM00938 Nitrogen regulatory protein P-II CJO11_RS04220 SM01230 CJO11_RS04220 CJO11_RS04400 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CJO11_RS04410 SM00530 Helix-turn-helix XRE-family like proteins CJO11_RS04415 SM00267 diguanylate cyclase CJO11_RS04420 SM00422 helix_turn_helix, mercury resistance CJO11_RS04425 SM00411 bacterial (prokaryotic) histone like domain CJO11_RS04450 SM00849 Metallo-beta-lactamase superfamily CJO11_RS04505 SM00487 DEAD-like helicases superfamily CJO11_RS04505 SM00490 helicase superfamily c-terminal domain CJO11_RS04530 SM00342 helix_turn_helix, arabinose operon control protein CJO11_RS04565 SM00382 ATPases associated with a variety of cellular activities CJO11_RS04605 SM00822 CJO11_RS04605 CJO11_RS04655 SM00562 CJO11_RS04655 CJO11_RS04685 SM00650 Ribosomal RNA adenine dimethylases CJO11_RS04755 SM00382 ATPases associated with a variety of cellular activities CJO11_RS04765 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJO11_RS04780 SM00357 Cold shock protein domain CJO11_RS04795 SM00363 S4 RNA-binding domain CJO11_RS04845 SM00382 ATPases associated with a variety of cellular activities CJO11_RS04850 SM00155 Phospholipase D. Active site motifs. CJO11_RS04855 SM01409 CJO11_RS04855 CJO11_RS04870 SM00382 ATPases associated with a variety of cellular activities CJO11_RS04925 SM00421 helix_turn_helix, Lux Regulon CJO11_RS05015 SM00448 cheY-homologous receiver domain CJO11_RS05015 SM00862 Transcriptional regulatory protein, C terminal CJO11_RS05105 SM00487 DEAD-like helicases superfamily CJO11_RS05105 SM00490 helicase superfamily c-terminal domain CJO11_RS05125 SM00825 Beta-ketoacyl synthase CJO11_RS05145 SM00341 Helicase and RNase D C-terminal CJO11_RS05145 SM00474 3'-5' exonuclease CJO11_RS05155 SM00487 DEAD-like helicases superfamily CJO11_RS05155 SM00490 helicase superfamily c-terminal domain CJO11_RS05180 SM00448 cheY-homologous receiver domain CJO11_RS05190 SM01329 CJO11_RS05190 CJO11_RS05205 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CJO11_RS05215 SM00382 ATPases associated with a variety of cellular activities CJO11_RS05220 SM00091 PAS domain CJO11_RS05220 SM00387 Histidine kinase-like ATPases CJO11_RS05220 SM00388 His Kinase A (phosphoacceptor) domain CJO11_RS05220 SM00448 cheY-homologous receiver domain CJO11_RS05245 SM01130 CJO11_RS05245 CJO11_RS05370 SM00972 Spore Coat Protein U domain CJO11_RS05380 SM00382 ATPases associated with a variety of cellular activities CJO11_RS05410 SM00052 Putative diguanylate phosphodiesterase CJO11_RS05410 SM00267 diguanylate cyclase CJO11_RS05420 SM00881 CoA binding domain CJO11_RS05425 SM00861 Transketolase, pyrimidine binding domain CJO11_RS05465 SM00662 RNA polymerases D CJO11_RS05535 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CJO11_RS05540 SM01374 CJO11_RS05540 CJO11_RS05560 SM00322 K homology RNA-binding domain CJO11_RS05575 SM01382 CJO11_RS05575 CJO11_RS05575 SM01383 CJO11_RS05575 CJO11_RS05595 SM01403 CJO11_RS05595 CJO11_RS05605 SM00838 Elongation factor G C-terminus CJO11_RS05605 SM00889 Elongation factor G, domain IV CJO11_RS05625 SM00954 Region found in RelA / SpoT proteins CJO11_RS05660 SM00448 cheY-homologous receiver domain CJO11_RS05665 SM00448 cheY-homologous receiver domain CJO11_RS05670 SM00911 HWE histidine kinase CJO11_RS05670 SM01079 CJO11_RS05670 CJO11_RS05740 SM00052 Putative diguanylate phosphodiesterase CJO11_RS05740 SM00267 diguanylate cyclase CJO11_RS05750 SM00729 Elongator protein 3, MiaB family, Radical SAM CJO11_RS05755 SM00382 ATPases associated with a variety of cellular activities CJO11_RS05755 SM00962 SRP54-type protein, GTPase domain CJO11_RS05755 SM00963 SRP54-type protein, helical bundle domain CJO11_RS05810 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJO11_RS05835 SM00935 Outer membrane protein (OmpH-like) CJO11_RS05845 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJO11_RS05915 SM00967 RNA 2'-O ribose methyltransferase substrate binding CJO11_RS05920 SM00411 bacterial (prokaryotic) histone like domain CJO11_RS05925 SM00382 ATPases associated with a variety of cellular activities CJO11_RS05925 SM00464 Found in ATP-dependent protease La (LON) CJO11_RS05940 SM00382 ATPases associated with a variety of cellular activities CJO11_RS05955 SM00487 DEAD-like helicases superfamily CJO11_RS05955 SM00490 helicase superfamily c-terminal domain CJO11_RS05955 SM00847 Helicase associated domain (HA2) Add an annotation CJO11_RS05965 SM00830 Chorismate mutase type II CJO11_RS05970 SM00387 Histidine kinase-like ATPases CJO11_RS05975 SM00448 cheY-homologous receiver domain CJO11_RS05975 SM00862 Transcriptional regulatory protein, C terminal CJO11_RS05990 SM00382 ATPases associated with a variety of cellular activities CJO11_RS06005 SM00530 Helix-turn-helix XRE-family like proteins CJO11_RS06025 SM01323 CJO11_RS06025 CJO11_RS06150 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJO11_RS06150 SM00895 CJO11_RS06150 CJO11_RS06155 SM01038 Beta galactosidase small chain CJO11_RS06160 SM00813 Alpha-L-arabinofuranosidase C-terminus CJO11_RS06195 SM00812 Alpha-L-fucosidase CJO11_RS06225 SM00342 helix_turn_helix, arabinose operon control protein CJO11_RS06275 SM00829 Enoylreductase CJO11_RS06395 SM00530 Helix-turn-helix XRE-family like proteins CJO11_RS06400 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CJO11_RS06425 SM00849 Metallo-beta-lactamase superfamily CJO11_RS06450 SM00235 Zinc-dependent metalloprotease CJO11_RS06515 SM00852 Probable molybdopterin binding domain CJO11_RS06525 SM00649 Ribosomal protein L11/L12 CJO11_RS06530 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CJO11_RS06530 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CJO11_RS06560 SM00857 Resolvase, N terminal domain CJO11_RS06655 SM00100 Cyclic nucleotide-monophosphate binding domain CJO11_RS06655 SM00419 helix_turn_helix, cAMP Regulatory protein CJO11_RS06665 SM01007 Class II Aldolase and Adducin N-terminal domain CJO11_RS06710 SM00984 UDP binding domain CJO11_RS06715 SM00984 UDP binding domain CJO11_RS06820 SM00382 ATPases associated with a variety of cellular activities CJO11_RS06870 SM00354 helix_turn _helix lactose operon repressor CJO11_RS06880 SM00642 Alpha-amylase domain CJO11_RS06890 SM00470 ParB-like nuclease domain CJO11_RS06910 SM00530 Helix-turn-helix XRE-family like proteins CJO11_RS06970 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJO11_RS06970 SM00895 CJO11_RS06970 CJO11_RS06980 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CJO11_RS06985 SM00822 CJO11_RS06985 CJO11_RS07005 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CJO11_RS07010 SM00829 Enoylreductase CJO11_RS07045 SM00487 DEAD-like helicases superfamily CJO11_RS07045 SM00490 helicase superfamily c-terminal domain CJO11_RS07065 SM00857 Resolvase, N terminal domain CJO11_RS07115 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJO11_RS07125 SM00244 prohibitin homologues CJO11_RS07130 SM00244 prohibitin homologues CJO11_RS07135 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJO11_RS07160 SM00829 Enoylreductase CJO11_RS07175 SM00663 RNA polymerase I subunit A N-terminus CJO11_RS07195 SM00530 Helix-turn-helix XRE-family like proteins CJO11_RS07230 SM00883 Chaperonin 10 Kd subunit CJO11_RS07260 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CJO11_RS07260 SM00474 3'-5' exonuclease CJO11_RS07260 SM00475 5'-3' exonuclease CJO11_RS07260 SM00482 DNA polymerase A domain CJO11_RS07265 SM00911 HWE histidine kinase CJO11_RS07275 SM00382 ATPases associated with a variety of cellular activities CJO11_RS07275 SM01072 Cell division protein 48 (CDC48) domain 2 CJO11_RS07275 SM01073 Cell division protein 48 (CDC48) N-terminal domain CJO11_RS07280 SM00882 Coenzyme A transferase CJO11_RS07295 SM00882 Coenzyme A transferase CJO11_RS07330 SM00937 CJO11_RS07330 CJO11_RS07360 SM00382 ATPases associated with a variety of cellular activities CJO11_RS07375 SM00448 cheY-homologous receiver domain CJO11_RS07375 SM00862 Transcriptional regulatory protein, C terminal CJO11_RS07380 SM00100 Cyclic nucleotide-monophosphate binding domain CJO11_RS07380 SM00419 helix_turn_helix, cAMP Regulatory protein CJO11_RS07400 SM00448 cheY-homologous receiver domain CJO11_RS07430 SM00671 Sel1-like repeats. CJO11_RS07460 SM00450 Rhodanese Homology Domain CJO11_RS07480 SM00507 HNH nucleases CJO11_RS07515 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CJO11_RS07515 SM00534 ATPase domain of DNA mismatch repair MUTS family CJO11_RS07520 SM00919 Malic enzyme, NAD binding domain CJO11_RS07520 SM01274 CJO11_RS07520 CJO11_RS07675 SM00357 Cold shock protein domain CJO11_RS07710 SM00938 Nitrogen regulatory protein P-II CJO11_RS07800 SM00244 prohibitin homologues CJO11_RS07830 SM01058 CarD-like/TRCF domain CJO11_RS07840 SM00363 S4 RNA-binding domain CJO11_RS07845 SM00490 helicase superfamily c-terminal domain CJO11_RS07855 SM01004 Delta-aminolevulinic acid dehydratase CJO11_RS07875 SM01152 CJO11_RS07875 CJO11_RS07890 SM00382 ATPases associated with a variety of cellular activities CJO11_RS07890 SM01086 C-terminal, D2-small domain, of ClpB protein CJO11_RS07900 SM00829 Enoylreductase CJO11_RS07970 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJO11_RS07970 SM00245 tail specific protease CJO11_RS07995 SM00984 UDP binding domain CJO11_RS08030 SM00710 Parallel beta-helix repeats CJO11_RS08105 SM00271 DnaJ molecular chaperone homology domain CJO11_RS08170 SM00382 ATPases associated with a variety of cellular activities CJO11_RS08205 SM00530 Helix-turn-helix XRE-family like proteins CJO11_RS08225 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CJO11_RS08280 SM00822 CJO11_RS08280 CJO11_RS08325 SM00474 3'-5' exonuclease CJO11_RS08330 SM00986 Uracil DNA glycosylase superfamily CJO11_RS08330 SM00987 UreE urease accessory protein, C-terminal domain CJO11_RS08335 SM00421 helix_turn_helix, Lux Regulon CJO11_RS08395 SM00382 ATPases associated with a variety of cellular activities CJO11_RS08460 SM00972 Spore Coat Protein U domain CJO11_RS08465 SM00972 Spore Coat Protein U domain CJO11_RS08470 SM00470 ParB-like nuclease domain CJO11_RS08485 SM01228 CJO11_RS08485 CJO11_RS08525 SM00357 Cold shock protein domain CJO11_RS08525 SM00382 ATPases associated with a variety of cellular activities CJO11_RS08525 SM00959 Rho termination factor, N-terminal domain CJO11_RS08560 SM00479 CJO11_RS08560 CJO11_RS08600 SM00116 Domain in cystathionine beta-synthase and other proteins. CJO11_RS08635 SM00387 Histidine kinase-like ATPases CJO11_RS08640 SM00448 cheY-homologous receiver domain CJO11_RS08640 SM00850 LytTr DNA-binding domain CJO11_RS08715 SM00448 cheY-homologous receiver domain CJO11_RS08715 SM00850 LytTr DNA-binding domain CJO11_RS08760 SM01209 CJO11_RS08760 CJO11_RS08760 SM01210 CJO11_RS08760 CJO11_RS08845 SM00342 helix_turn_helix, arabinose operon control protein CJO11_RS08970 SM00798 AICARFT/IMPCHase bienzyme CJO11_RS08970 SM00851 MGS-like domain CJO11_RS08995 SM00861 Transketolase, pyrimidine binding domain CJO11_RS09020 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJO11_RS09025 SM00411 bacterial (prokaryotic) histone like domain CJO11_RS09080 SM00893 Electron transfer flavoprotein domain CJO11_RS09085 SM00893 Electron transfer flavoprotein domain CJO11_RS09105 SM01091 Transporter associated domain CJO11_RS09125 SM00904 Riboflavin kinase CJO11_RS09140 SM01001 AIR carboxylase CJO11_RS09145 SM00855 Phosphoglycerate mutase family CJO11_RS09220 SM00271 DnaJ molecular chaperone homology domain CJO11_RS09235 SM00487 DEAD-like helicases superfamily CJO11_RS09235 SM00490 helicase superfamily c-terminal domain CJO11_RS09285 SM01400 CJO11_RS09285 CJO11_RS09330 SM00342 helix_turn_helix, arabinose operon control protein CJO11_RS09335 SM00342 helix_turn_helix, arabinose operon control protein CJO11_RS09345 SM00873 B3/4 domain CJO11_RS09345 SM00874 tRNA synthetase B5 domain CJO11_RS09345 SM00896 Ferredoxin-fold anticodon binding domain CJO11_RS09360 SM00387 Histidine kinase-like ATPases CJO11_RS09360 SM00388 His Kinase A (phosphoacceptor) domain CJO11_RS09365 SM00448 cheY-homologous receiver domain CJO11_RS09365 SM00862 Transcriptional regulatory protein, C terminal CJO11_RS09370 SM00054 EF-hand, calcium binding motif CJO11_RS09405 SM00014 Acid phosphatase homologues CJO11_RS09450 SM00823 Phosphopantetheine attachment site CJO11_RS09450 SM00824 Thioesterase CJO11_RS09500 SM00421 helix_turn_helix, Lux Regulon CJO11_RS09510 SM00849 Metallo-beta-lactamase superfamily CJO11_RS09560 SM00729 Elongator protein 3, MiaB family, Radical SAM CJO11_RS09605 SM00100 Cyclic nucleotide-monophosphate binding domain CJO11_RS09605 SM00419 helix_turn_helix, cAMP Regulatory protein CJO11_RS09750 SM00464 Found in ATP-dependent protease La (LON) CJO11_RS09840 SM00382 ATPases associated with a variety of cellular activities CJO11_RS09865 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. CJO11_RS09910 SM00387 Histidine kinase-like ATPases CJO11_RS09910 SM00433 TopoisomeraseII CJO11_RS09930 SM00563 Phosphate acyltransferases CJO11_RS09950 SM00382 ATPases associated with a variety of cellular activities CJO11_RS09975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJO11_RS10000 SM00382 ATPases associated with a variety of cellular activities CJO11_RS10000 SM00843 CJO11_RS10000 CJO11_RS10010 SM00903 Flavin reductase like domain CJO11_RS10020 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CJO11_RS10020 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CJO11_RS10030 SM00382 ATPases associated with a variety of cellular activities CJO11_RS10045 SM00563 Phosphate acyltransferases CJO11_RS10125 SM00382 ATPases associated with a variety of cellular activities CJO11_RS10135 SM00316 Ribosomal protein S1-like RNA-binding domain CJO11_RS10135 SM00322 K homology RNA-binding domain CJO11_RS10170 SM00867 YceI-like domain CJO11_RS10195 SM01387 CJO11_RS10195 CJO11_RS10200 SM00316 Ribosomal protein S1-like RNA-binding domain CJO11_RS10200 SM00322 K homology RNA-binding domain CJO11_RS10225 SM00992 Hemimethylated DNA-binding protein YccV like CJO11_RS10235 SM00822 CJO11_RS10235 CJO11_RS10250 SM00861 Transketolase, pyrimidine binding domain CJO11_RS10290 SM00861 Transketolase, pyrimidine binding domain CJO11_RS10320 SM00421 helix_turn_helix, Lux Regulon CJO11_RS10370 SM00829 Enoylreductase CJO11_RS10375 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CJO11_RS10380 SM00829 Enoylreductase CJO11_RS10400 SM00822 CJO11_RS10400 CJO11_RS10450 SM00829 Enoylreductase CJO11_RS10505 SM00382 ATPases associated with a variety of cellular activities CJO11_RS10530 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CJO11_RS10540 SM00354 helix_turn _helix lactose operon repressor CJO11_RS10570 SM00342 helix_turn_helix, arabinose operon control protein CJO11_RS10575 SM00091 PAS domain CJO11_RS10575 SM00421 helix_turn_helix, Lux Regulon CJO11_RS10660 SM00953 CJO11_RS10660 CJO11_RS10695 SM00248 ankyrin repeats CJO11_RS10705 SM00899 CJO11_RS10705 CJO11_RS10740 SM00382 ATPases associated with a variety of cellular activities CJO11_RS10740 SM01086 C-terminal, D2-small domain, of ClpB protein CJO11_RS10750 SM00028 Tetratricopeptide repeats CJO11_RS10760 SM00382 ATPases associated with a variety of cellular activities CJO11_RS10985 SM00487 DEAD-like helicases superfamily CJO11_RS10985 SM00490 helicase superfamily c-terminal domain CJO11_RS11015 SM00460 Transglutaminase/protease-like homologues CJO11_RS11025 SM00421 helix_turn_helix, Lux Regulon CJO11_RS11110 SM00382 ATPases associated with a variety of cellular activities CJO11_RS11125 SM01329 CJO11_RS11125 CJO11_RS11180 SM00382 ATPases associated with a variety of cellular activities CJO11_RS11260 SM00845 GatB domain CJO11_RS11300 SM00382 ATPases associated with a variety of cellular activities CJO11_RS11300 SM01086 C-terminal, D2-small domain, of ClpB protein CJO11_RS11335 SM00347 helix_turn_helix multiple antibiotic resistance protein CJO11_RS11365 SM00858 CJO11_RS11365 CJO11_RS11410 SM00836 DALR anticodon binding domain CJO11_RS11410 SM01016 Arginyl tRNA synthetase N terminal dom CJO11_RS11485 SM00746 metallochaperone-like domain CJO11_RS11565 SM00878 Biotin carboxylase C-terminal domain CJO11_RS11595 SM00448 cheY-homologous receiver domain CJO11_RS11680 SM00421 helix_turn_helix, Lux Regulon CJO11_RS11700 SM00862 Transcriptional regulatory protein, C terminal CJO11_RS11725 SM00382 ATPases associated with a variety of cellular activities CJO11_RS11740 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJO11_RS11755 SM01018 B12 binding domain CJO11_RS11820 SM00052 Putative diguanylate phosphodiesterase CJO11_RS11820 SM00267 diguanylate cyclase CJO11_RS11825 SM01211 CJO11_RS11825 CJO11_RS11875 SM00316 Ribosomal protein S1-like RNA-binding domain CJO11_RS11875 SM00652 eukaryotic translation initiation factor 1A CJO11_RS11905 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CJO11_RS11905 SM00465 GIY-YIG type nucleases (URI domain) CJO11_RS11915 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJO11_RS11940 SM00729 Elongator protein 3, MiaB family, Radical SAM CJO11_RS11965 SM00073 Histidine Phosphotransfer domain CJO11_RS11965 SM00260 Two component signalling adaptor domain CJO11_RS11965 SM00387 Histidine kinase-like ATPases CJO11_RS11965 SM01231 CJO11_RS11965 CJO11_RS11970 SM00260 Two component signalling adaptor domain CJO11_RS11975 SM00448 cheY-homologous receiver domain CJO11_RS11980 SM00448 cheY-homologous receiver domain CJO11_RS11985 SM00138 Methyltransferase, chemotaxis proteins CJO11_RS11990 SM00052 Putative diguanylate phosphodiesterase CJO11_RS11990 SM00267 diguanylate cyclase CJO11_RS11995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CJO11_RS12060 SM00028 Tetratricopeptide repeats CJO11_RS12075 SM00671 Sel1-like repeats. CJO11_RS12130 SM00382 ATPases associated with a variety of cellular activities CJO11_RS12130 SM00994 ClpX C4-type zinc finger CJO11_RS12130 SM01086 C-terminal, D2-small domain, of ClpB protein CJO11_RS12165 SM00363 S4 RNA-binding domain CJO11_RS12170 SM00232 JAB/MPN domain CJO11_RS12185 SM00644 CJO11_RS12185 CJO11_RS12280 SM00478 endonuclease III CJO11_RS12280 SM00525 CJO11_RS12280 CJO11_RS12320 SM00924 MgtE intracellular N domain CJO11_RS12335 SM01091 Transporter associated domain CJO11_RS12380 SM00564 beta-propeller repeat CJO11_RS12450 SM00382 ATPases associated with a variety of cellular activities CJO11_RS12470 SM01234 CJO11_RS12470 CJO11_RS12525 SM00422 helix_turn_helix, mercury resistance CJO11_RS12540 SM00491 CJO11_RS12540 CJO11_RS12560 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CJO11_RS12595 SM00382 ATPases associated with a variety of cellular activities CJO11_RS12620 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CJO11_RS12645 SM00729 Elongator protein 3, MiaB family, Radical SAM CJO11_RS12650 SM00729 Elongator protein 3, MiaB family, Radical SAM CJO11_RS12710 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJO11_RS12735 SM00450 Rhodanese Homology Domain CJO11_RS12755 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJO11_RS12765 SM00849 Metallo-beta-lactamase superfamily CJO11_RS12785 SM00388 His Kinase A (phosphoacceptor) domain CJO11_RS12790 SM00344 helix_turn_helix ASNC type CJO11_RS12800 SM00878 Biotin carboxylase C-terminal domain CJO11_RS12815 SM00465 GIY-YIG type nucleases (URI domain) CJO11_RS12830 SM00493 CJO11_RS12830 CJO11_RS12855 SM00967 RNA 2'-O ribose methyltransferase substrate binding CJO11_RS12880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJO11_RS12880 SM00387 Histidine kinase-like ATPases CJO11_RS12880 SM00388 His Kinase A (phosphoacceptor) domain CJO11_RS12885 SM00448 cheY-homologous receiver domain CJO11_RS12885 SM00862 Transcriptional regulatory protein, C terminal CJO11_RS12945 SM00434 DNA Topoisomerase IV CJO11_RS12970 SM00357 Cold shock protein domain CJO11_RS13010 SM00354 helix_turn _helix lactose operon repressor CJO11_RS13025 SM00642 Alpha-amylase domain CJO11_RS13030 SM00642 Alpha-amylase domain CJO11_RS13045 SM00354 helix_turn _helix lactose operon repressor CJO11_RS13055 SM00642 Alpha-amylase domain CJO11_RS13080 SM00028 Tetratricopeptide repeats CJO11_RS13095 SM00382 ATPases associated with a variety of cellular activities CJO11_RS13130 SM00858 CJO11_RS13130